Query 002278
Match_columns 943
No_of_seqs 939 out of 6673
Neff 9.4
Searched_HMMs 46136
Date Thu Mar 28 20:30:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002278.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/002278hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 1E-108 3E-113 1040.0 62.3 862 1-891 35-955 (968)
2 PLN00113 leucine-rich repeat r 100.0 1.2E-56 2.6E-61 567.1 28.5 467 39-507 141-609 (968)
3 KOG1187 Serine/threonine prote 100.0 6.9E-49 1.5E-53 429.7 28.2 287 602-889 61-354 (361)
4 KOG0575 Polo-like serine/threo 100.0 1E-45 2.2E-50 400.1 22.9 251 616-886 18-272 (592)
5 KOG0581 Mitogen-activated prot 100.0 1.4E-45 3E-50 377.5 19.4 251 616-885 79-337 (364)
6 KOG0192 Tyrosine kinase specif 100.0 5E-45 1.1E-49 395.6 24.6 259 617-891 42-307 (362)
7 KOG0615 Serine/threonine prote 100.0 4.9E-46 1.1E-50 382.3 14.4 257 614-887 170-441 (475)
8 KOG0595 Serine/threonine-prote 100.0 4.2E-45 9.1E-50 376.6 21.3 252 614-883 8-268 (429)
9 KOG0472 Leucine-rich repeat pr 100.0 3.8E-49 8.2E-54 402.0 -15.4 474 40-528 47-540 (565)
10 KOG0197 Tyrosine kinases [Sign 100.0 2.2E-44 4.8E-49 386.6 19.8 260 614-890 204-464 (468)
11 KOG0598 Ribosomal protein S6 k 100.0 5.4E-44 1.2E-48 365.9 17.0 251 614-883 23-281 (357)
12 KOG0591 NIMA (never in mitosis 100.0 1.4E-45 3E-50 359.9 4.6 259 615-886 18-284 (375)
13 KOG0593 Predicted protein kina 100.0 3.7E-44 8.1E-49 353.5 13.4 261 616-883 2-284 (396)
14 KOG0592 3-phosphoinositide-dep 100.0 9E-43 1.9E-47 370.1 17.3 254 612-884 69-339 (604)
15 KOG0600 Cdc2-related protein k 100.0 2E-42 4.4E-47 364.5 18.3 264 614-883 115-400 (560)
16 KOG0661 MAPK related serine/th 100.0 5E-43 1.1E-47 366.3 12.9 264 614-885 8-293 (538)
17 KOG0659 Cdk activating kinase 100.0 1.6E-41 3.5E-46 329.8 20.4 263 616-885 2-283 (318)
18 KOG4194 Membrane glycoprotein 100.0 1E-43 2.2E-48 377.5 4.4 390 40-454 54-448 (873)
19 KOG0198 MEKK and related serin 100.0 8E-42 1.7E-46 358.3 17.3 258 616-889 17-282 (313)
20 KOG4194 Membrane glycoprotein 100.0 3.8E-43 8.2E-48 373.2 7.2 389 65-478 55-448 (873)
21 KOG0616 cAMP-dependent protein 100.0 9.8E-42 2.1E-46 336.2 16.6 237 615-874 43-283 (355)
22 KOG1026 Nerve growth factor re 100.0 1.7E-41 3.7E-46 381.8 19.3 265 615-894 485-769 (774)
23 KOG0578 p21-activated serine/t 100.0 1E-41 2.2E-46 366.1 16.5 253 615-885 272-525 (550)
24 KOG0472 Leucine-rich repeat pr 100.0 1.3E-45 2.7E-50 376.3 -15.3 465 59-539 42-528 (565)
25 KOG0582 Ste20-like serine/thre 100.0 1.3E-40 2.8E-45 345.6 21.3 264 614-884 24-294 (516)
26 KOG0583 Serine/threonine prote 100.0 2.6E-40 5.7E-45 362.7 24.0 256 614-888 15-280 (370)
27 KOG0597 Serine-threonine prote 100.0 1.7E-41 3.8E-46 359.5 13.7 247 616-884 2-252 (808)
28 KOG0605 NDR and related serine 100.0 2.9E-40 6.4E-45 351.8 21.0 256 614-885 139-447 (550)
29 KOG0663 Protein kinase PITSLRE 100.0 2.9E-40 6.2E-45 330.6 18.5 265 614-885 74-363 (419)
30 KOG0193 Serine/threonine prote 100.0 1.4E-40 3.1E-45 357.6 12.7 265 610-890 386-656 (678)
31 KOG0196 Tyrosine kinase, EPH ( 100.0 8.9E-41 1.9E-45 366.9 10.6 271 605-892 609-896 (996)
32 KOG0201 Serine/threonine prote 100.0 6E-41 1.3E-45 348.4 7.8 251 615-884 12-264 (467)
33 KOG0588 Serine/threonine prote 100.0 7.5E-40 1.6E-44 354.8 16.0 251 616-887 12-267 (786)
34 KOG0580 Serine/threonine prote 100.0 7.5E-40 1.6E-44 313.8 13.1 253 614-886 20-276 (281)
35 cd05102 PTKc_VEGFR3 Catalytic 100.0 7E-39 1.5E-43 356.4 22.2 262 614-889 5-336 (338)
36 KOG0033 Ca2+/calmodulin-depend 100.0 9.4E-41 2E-45 319.5 5.5 257 614-887 9-271 (355)
37 KOG0660 Mitogen-activated prot 100.0 2.4E-39 5.2E-44 330.3 15.8 264 614-884 20-311 (359)
38 KOG1095 Protein tyrosine kinas 100.0 5.4E-39 1.2E-43 375.0 20.6 266 615-895 691-969 (1025)
39 cd05571 STKc_PKB Catalytic dom 100.0 1.6E-38 3.6E-43 350.4 22.8 244 622-885 1-253 (323)
40 KOG0194 Protein tyrosine kinas 100.0 6.8E-39 1.5E-43 350.8 17.8 260 617-893 158-426 (474)
41 PTZ00263 protein kinase A cata 100.0 2E-38 4.4E-43 350.5 21.8 248 615-885 17-273 (329)
42 KOG4721 Serine/threonine prote 100.0 1.1E-39 2.3E-44 345.4 10.9 241 620-887 128-368 (904)
43 KOG0694 Serine/threonine prote 100.0 2.3E-38 5.1E-43 346.6 20.0 249 614-883 366-624 (694)
44 KOG0589 Serine/threonine prote 100.0 3.9E-39 8.5E-44 345.6 13.6 252 615-883 3-258 (426)
45 cd05612 STKc_PRKX_like Catalyt 100.0 1.4E-38 3.1E-43 345.7 18.1 247 616-885 1-256 (291)
46 cd05631 STKc_GRK4 Catalytic do 100.0 5.1E-38 1.1E-42 340.4 22.0 253 618-885 2-263 (285)
47 KOG0599 Phosphorylase kinase g 100.0 2.5E-39 5.5E-44 314.2 10.2 261 609-886 10-286 (411)
48 PHA02988 hypothetical protein; 100.0 1.3E-37 2.8E-42 336.2 24.7 247 621-888 25-280 (283)
49 KOG0611 Predicted serine/threo 100.0 8.1E-39 1.8E-43 326.0 13.8 250 615-886 52-306 (668)
50 cd07848 STKc_CDKL5 Catalytic d 100.0 4E-38 8.6E-43 342.0 20.2 262 616-883 1-284 (287)
51 KOG0032 Ca2+/calmodulin-depend 100.0 7.4E-38 1.6E-42 342.7 22.4 254 614-885 33-295 (382)
52 cd05593 STKc_PKB_gamma Catalyt 100.0 1E-37 2.2E-42 344.5 23.7 244 622-885 1-253 (328)
53 PTZ00426 cAMP-dependent protei 100.0 3.5E-38 7.5E-43 349.1 19.8 248 615-885 29-286 (340)
54 KOG0594 Protein kinase PCTAIRE 100.0 5E-38 1.1E-42 322.6 19.1 264 615-883 10-302 (323)
55 cd05595 STKc_PKB_beta Catalyti 100.0 8.5E-38 1.8E-42 344.5 22.3 244 622-885 1-253 (323)
56 KOG2345 Serine/threonine prote 100.0 3E-39 6.5E-44 310.8 9.3 265 613-888 18-301 (302)
57 KOG0585 Ca2+/calmodulin-depend 100.0 2.7E-38 5.8E-43 330.2 16.7 260 613-889 94-378 (576)
58 cd07871 STKc_PCTAIRE3 Catalyti 100.0 1.1E-37 2.4E-42 338.3 22.3 262 616-884 5-286 (288)
59 cd05114 PTKc_Tec_Rlk Catalytic 100.0 2.7E-37 5.8E-42 329.4 23.9 251 616-884 4-255 (256)
60 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 8.9E-38 1.9E-42 346.4 20.6 255 616-885 1-259 (333)
61 KOG3653 Transforming growth fa 100.0 3.1E-38 6.6E-43 330.3 15.6 271 615-893 209-509 (534)
62 cd05096 PTKc_DDR1 Catalytic do 100.0 2.6E-37 5.7E-42 338.4 23.8 263 615-885 4-303 (304)
63 cd05064 PTKc_EphR_A10 Catalyti 100.0 3.6E-37 7.7E-42 330.3 23.9 256 615-887 4-265 (266)
64 cd05585 STKc_YPK1_like Catalyt 100.0 7.6E-38 1.6E-42 343.5 19.0 242 624-885 1-249 (312)
65 cd05626 STKc_LATS2 Catalytic d 100.0 2.9E-37 6.3E-42 348.3 23.8 254 617-885 2-307 (381)
66 KOG0658 Glycogen synthase kina 100.0 1.4E-38 3E-43 325.3 11.8 259 616-884 24-307 (364)
67 cd05621 STKc_ROCK2 Catalytic d 100.0 2.7E-37 5.8E-42 345.9 23.1 256 614-885 41-306 (370)
68 cd05596 STKc_ROCK Catalytic do 100.0 2.5E-37 5.4E-42 346.7 22.6 256 614-885 41-306 (370)
69 cd06649 PKc_MEK2 Catalytic dom 100.0 3.6E-37 7.8E-42 341.0 23.6 259 615-886 4-304 (331)
70 cd05592 STKc_nPKC_theta_delta 100.0 3.5E-37 7.6E-42 338.5 23.0 242 622-883 1-248 (316)
71 cd05599 STKc_NDR_like Catalyti 100.0 2.7E-37 5.8E-42 347.2 22.1 254 616-885 1-298 (364)
72 KOG1094 Discoidin domain recep 100.0 1.2E-37 2.7E-42 331.5 18.1 264 614-887 536-804 (807)
73 cd05584 STKc_p70S6K Catalytic 100.0 2.6E-37 5.7E-42 340.8 21.5 244 622-885 2-258 (323)
74 cd05590 STKc_nPKC_eta Catalyti 100.0 2.5E-37 5.3E-42 340.4 21.0 244 622-885 1-255 (320)
75 cd05573 STKc_ROCK_NDR_like Cat 100.0 2.2E-37 4.8E-42 346.3 20.3 254 616-885 1-287 (350)
76 cd05594 STKc_PKB_alpha Catalyt 100.0 2.3E-37 5E-42 341.7 20.1 244 622-885 1-254 (325)
77 KOG0574 STE20-like serine/thre 100.0 1.1E-39 2.4E-44 320.3 1.2 251 616-884 33-284 (502)
78 cd05614 STKc_MSK2_N N-terminal 100.0 5E-37 1.1E-41 340.4 22.2 251 617-885 1-269 (332)
79 cd05104 PTKc_Kit Catalytic dom 100.0 5.6E-37 1.2E-41 344.6 22.9 259 615-887 34-374 (375)
80 cd05068 PTKc_Frk_like Catalyti 100.0 1.7E-36 3.6E-41 324.3 25.2 256 614-886 4-260 (261)
81 cd05628 STKc_NDR1 Catalytic do 100.0 6E-37 1.3E-41 343.6 22.6 254 616-884 1-294 (363)
82 cd05072 PTKc_Lyn Catalytic dom 100.0 1.1E-36 2.5E-41 325.7 23.5 255 615-886 5-260 (261)
83 cd07869 STKc_PFTAIRE1 Catalyti 100.0 5.3E-37 1.2E-41 335.7 21.4 264 615-885 4-290 (303)
84 cd05582 STKc_RSK_N N-terminal 100.0 2.5E-37 5.5E-42 340.5 18.7 242 622-883 2-254 (318)
85 PHA03212 serine/threonine kina 100.0 6.2E-37 1.4E-41 344.7 22.1 258 615-885 91-378 (391)
86 cd05106 PTKc_CSF-1R Catalytic 100.0 5.4E-37 1.2E-41 344.3 21.2 261 614-888 36-373 (374)
87 cd05589 STKc_PKN Catalytic dom 100.0 6.7E-37 1.5E-41 337.9 21.6 246 618-884 1-258 (324)
88 cd05113 PTKc_Btk_Bmx Catalytic 100.0 1.6E-36 3.6E-41 323.2 23.8 252 616-885 4-256 (256)
89 cd05601 STKc_CRIK Catalytic do 100.0 3.7E-37 8.1E-42 341.1 19.4 255 616-885 1-265 (330)
90 KOG1989 ARK protein kinase fam 100.0 2.3E-37 4.9E-42 350.7 17.9 260 615-891 36-315 (738)
91 cd05587 STKc_cPKC Catalytic do 100.0 6.4E-37 1.4E-41 338.1 21.1 247 617-883 1-257 (324)
92 cd05598 STKc_LATS Catalytic do 100.0 6.3E-37 1.4E-41 345.6 21.5 253 617-885 2-303 (376)
93 cd05622 STKc_ROCK1 Catalytic d 100.0 1.2E-36 2.6E-41 341.1 23.2 261 609-885 36-306 (371)
94 cd05591 STKc_nPKC_epsilon Cata 100.0 4.3E-37 9.3E-42 339.0 19.3 244 622-885 1-256 (321)
95 KOG4278 Protein tyrosine kinas 100.0 1E-37 2.2E-42 332.8 13.3 266 609-891 260-527 (1157)
96 cd05148 PTKc_Srm_Brk Catalytic 100.0 1.4E-36 3E-41 325.0 22.3 257 613-886 3-260 (261)
97 cd05619 STKc_nPKC_theta Cataly 100.0 2.5E-36 5.3E-41 331.6 24.5 242 622-883 1-248 (316)
98 cd07862 STKc_CDK6 Catalytic do 100.0 1.3E-36 2.7E-41 330.8 21.9 261 616-883 1-287 (290)
99 cd07859 STKc_TDY_MAPK_plant Ca 100.0 1.1E-36 2.3E-41 339.2 21.8 262 617-885 1-292 (338)
100 cd05620 STKc_nPKC_delta Cataly 100.0 7.7E-37 1.7E-41 335.8 20.0 243 622-884 1-249 (316)
101 cd05629 STKc_NDR_like_fungal C 100.0 7.8E-37 1.7E-41 344.8 20.5 254 616-885 1-307 (377)
102 PLN00034 mitogen-activated pro 100.0 1.7E-36 3.7E-41 338.8 23.0 249 616-886 74-331 (353)
103 cd05625 STKc_LATS1 Catalytic d 100.0 1.1E-36 2.3E-41 344.3 21.5 252 617-884 2-306 (382)
104 PTZ00267 NIMA-related protein 100.0 1.5E-36 3.2E-41 351.3 23.0 252 617-883 68-323 (478)
105 PF07714 Pkinase_Tyr: Protein 100.0 8.2E-37 1.8E-41 325.9 18.9 249 620-884 3-259 (259)
106 cd05570 STKc_PKC Catalytic dom 100.0 1.1E-36 2.4E-41 335.1 20.4 243 622-884 1-253 (318)
107 cd05605 STKc_GRK4_like Catalyt 100.0 1.5E-36 3.3E-41 328.8 21.0 254 617-885 1-263 (285)
108 cd05608 STKc_GRK1 Catalytic do 100.0 1.6E-36 3.4E-41 327.8 20.9 249 624-885 1-259 (280)
109 KOG4279 Serine/threonine prote 100.0 1.3E-37 2.8E-42 336.0 12.3 247 621-883 580-832 (1226)
110 KOG0577 Serine/threonine prote 100.0 6.5E-38 1.4E-42 333.2 9.6 252 615-888 25-283 (948)
111 KOG0610 Putative serine/threon 100.0 1.1E-36 2.4E-41 314.1 18.4 254 616-884 77-393 (459)
112 KOG0444 Cytoskeletal regulator 100.0 1E-39 2.2E-44 348.4 -4.1 374 59-511 4-380 (1255)
113 cd05105 PTKc_PDGFR_alpha Catal 100.0 2.7E-36 5.9E-41 339.5 23.3 262 614-889 35-399 (400)
114 cd05616 STKc_cPKC_beta Catalyt 100.0 1.2E-36 2.7E-41 335.7 20.0 247 617-883 1-257 (323)
115 cd05048 PTKc_Ror Catalytic Dom 100.0 4E-36 8.6E-41 325.6 23.4 256 616-886 5-282 (283)
116 cd05071 PTKc_Src Catalytic dom 100.0 5.3E-36 1.1E-40 320.5 23.9 256 615-888 5-261 (262)
117 cd05059 PTKc_Tec_like Catalyti 100.0 4E-36 8.6E-41 320.4 22.7 251 616-884 4-255 (256)
118 cd05052 PTKc_Abl Catalytic dom 100.0 7.1E-36 1.5E-40 319.8 24.6 255 616-887 6-262 (263)
119 KOG4257 Focal adhesion tyrosin 100.0 3.7E-37 8E-42 329.5 14.5 257 615-889 388-651 (974)
120 cd06650 PKc_MEK1 Catalytic dom 100.0 4.3E-36 9.3E-41 332.3 23.5 259 615-885 4-301 (333)
121 cd05575 STKc_SGK Catalytic dom 100.0 1.8E-36 3.9E-41 334.3 20.4 242 622-883 1-251 (323)
122 cd05108 PTKc_EGFR Catalytic do 100.0 6.7E-36 1.5E-40 328.9 24.9 258 616-891 7-272 (316)
123 cd08228 STKc_Nek6 Catalytic do 100.0 4.3E-36 9.3E-41 322.4 22.5 258 616-887 2-265 (267)
124 cd05049 PTKc_Trk Catalytic dom 100.0 4.7E-36 1E-40 324.5 23.0 256 615-885 4-279 (280)
125 KOG0618 Serine/threonine phosp 100.0 1.2E-39 2.5E-44 365.3 -5.5 445 40-504 23-487 (1081)
126 cd05033 PTKc_EphR Catalytic do 100.0 9.8E-36 2.1E-40 319.4 24.9 256 615-887 3-265 (266)
127 cd05094 PTKc_TrkC Catalytic do 100.0 6.5E-36 1.4E-40 325.1 23.9 262 615-891 4-286 (291)
128 cd05627 STKc_NDR2 Catalytic do 100.0 2.8E-36 6.1E-41 338.0 21.3 254 616-885 1-295 (360)
129 KOG0618 Serine/threonine phosp 100.0 1.2E-39 2.6E-44 365.3 -6.0 445 39-503 46-510 (1081)
130 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 1.1E-35 2.3E-40 317.9 24.6 254 615-886 5-259 (260)
131 cd05588 STKc_aPKC Catalytic do 100.0 2.7E-36 5.8E-41 333.6 20.6 246 622-885 1-264 (329)
132 KOG2052 Activin A type IB rece 100.0 2.5E-36 5.5E-41 313.5 19.0 267 614-889 209-505 (513)
133 cd05093 PTKc_TrkB Catalytic do 100.0 6.5E-36 1.4E-40 324.6 23.2 261 615-890 4-282 (288)
134 cd06646 STKc_MAP4K5 Catalytic 100.0 3.8E-36 8.2E-41 322.8 21.1 255 615-884 8-266 (267)
135 KOG0667 Dual-specificity tyros 100.0 1.5E-36 3.4E-41 333.1 18.0 261 617-887 187-506 (586)
136 cd05618 STKc_aPKC_iota Catalyt 100.0 2.5E-36 5.5E-41 333.5 19.9 245 622-884 1-263 (329)
137 PTZ00036 glycogen synthase kin 100.0 2.1E-36 4.6E-41 346.0 19.6 262 614-885 64-353 (440)
138 cd05067 PTKc_Lck_Blk Catalytic 100.0 1.3E-35 2.8E-40 317.3 24.4 255 614-886 4-259 (260)
139 cd07853 STKc_NLK Catalytic dom 100.0 4.8E-36 1E-40 337.7 22.0 262 617-885 1-290 (372)
140 cd05062 PTKc_IGF-1R Catalytic 100.0 7.9E-36 1.7E-40 322.1 22.7 257 614-885 4-276 (277)
141 PTZ00283 serine/threonine prot 100.0 4.3E-36 9.4E-41 347.2 22.0 256 613-883 29-297 (496)
142 cd05090 PTKc_Ror1 Catalytic do 100.0 1.1E-35 2.5E-40 321.9 23.9 256 616-886 5-282 (283)
143 cd05069 PTKc_Yes Catalytic dom 100.0 1.9E-35 4.1E-40 316.0 25.2 253 616-886 6-259 (260)
144 cd06654 STKc_PAK1 Catalytic do 100.0 9E-36 1.9E-40 324.6 23.1 253 615-885 19-272 (296)
145 cd05111 PTK_HER3 Pseudokinase 100.0 1.4E-35 3.1E-40 320.3 24.3 259 616-892 7-273 (279)
146 KOG0444 Cytoskeletal regulator 100.0 1.8E-39 3.9E-44 346.6 -5.9 363 40-457 9-374 (1255)
147 cd07876 STKc_JNK2 Catalytic do 100.0 3.9E-36 8.4E-41 336.9 20.6 262 614-886 19-318 (359)
148 cd06625 STKc_MEKK3_like Cataly 100.0 1.2E-35 2.6E-40 318.1 23.2 253 616-885 2-262 (263)
149 cd05615 STKc_cPKC_alpha Cataly 100.0 4.7E-36 1E-40 330.7 20.5 247 617-883 1-257 (323)
150 cd05054 PTKc_VEGFR Catalytic d 100.0 5.8E-36 1.3E-40 331.4 21.3 261 615-889 6-335 (337)
151 cd05602 STKc_SGK1 Catalytic do 100.0 3.2E-36 6.9E-41 332.6 18.9 238 622-879 1-243 (325)
152 cd05603 STKc_SGK2 Catalytic do 100.0 5E-36 1.1E-40 330.6 20.4 242 622-883 1-251 (321)
153 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 2.6E-35 5.6E-40 316.3 25.0 259 616-888 2-266 (267)
154 cd08229 STKc_Nek7 Catalytic do 100.0 9.9E-36 2.1E-40 319.6 21.7 258 616-887 2-265 (267)
155 cd07872 STKc_PCTAIRE2 Catalyti 100.0 7.7E-36 1.7E-40 327.5 21.1 264 616-886 6-289 (309)
156 KOG0579 Ste20-like serine/thre 100.0 9.3E-38 2E-42 333.7 5.1 254 616-885 32-291 (1187)
157 cd05624 STKc_MRCK_beta Catalyt 100.0 1.2E-35 2.6E-40 328.7 22.1 257 616-885 1-268 (331)
158 cd05604 STKc_SGK3 Catalytic do 100.0 3.4E-36 7.5E-41 332.4 17.3 242 622-883 1-251 (325)
159 cd05597 STKc_DMPK_like Catalyt 100.0 1.8E-35 3.9E-40 327.2 23.0 257 616-885 1-268 (331)
160 cd05085 PTKc_Fer Catalytic dom 100.0 3.4E-35 7.5E-40 312.0 24.2 246 623-885 2-249 (250)
161 cd05617 STKc_aPKC_zeta Catalyt 100.0 1.6E-35 3.4E-40 327.1 22.0 244 622-884 1-261 (327)
162 cd05632 STKc_GRK5 Catalytic do 100.0 2.2E-35 4.8E-40 319.7 22.6 252 618-884 2-262 (285)
163 cd05034 PTKc_Src_like Catalyti 100.0 4.2E-35 9.1E-40 313.5 24.4 256 614-886 4-260 (261)
164 cd08529 STKc_FA2-like Catalyti 100.0 2.8E-35 6.1E-40 313.9 23.0 250 617-883 1-253 (256)
165 cd05092 PTKc_TrkA Catalytic do 100.0 2.4E-35 5.2E-40 318.7 22.7 256 615-885 4-279 (280)
166 cd05107 PTKc_PDGFR_beta Cataly 100.0 2.6E-35 5.6E-40 331.3 23.7 263 612-888 33-400 (401)
167 cd05036 PTKc_ALK_LTK Catalytic 100.0 2.7E-35 5.8E-40 317.9 22.9 257 614-885 4-276 (277)
168 PRK13184 pknD serine/threonine 100.0 1.4E-35 3.1E-40 349.8 22.4 261 616-889 2-292 (932)
169 cd05116 PTKc_Syk Catalytic dom 100.0 4.2E-35 9E-40 312.7 23.9 246 623-887 2-255 (257)
170 cd05091 PTKc_Ror2 Catalytic do 100.0 2.1E-35 4.6E-40 319.9 21.7 256 616-886 5-282 (283)
171 cd05075 PTKc_Axl Catalytic dom 100.0 4.6E-35 1E-39 315.3 24.2 254 619-887 2-271 (272)
172 cd07861 STKc_CDK1_euk Catalyti 100.0 2.5E-35 5.4E-40 319.7 22.2 262 617-883 1-282 (285)
173 cd05084 PTKc_Fes Catalytic dom 100.0 3.8E-35 8.2E-40 312.1 23.0 246 623-885 2-251 (252)
174 cd05043 PTK_Ryk Pseudokinase d 100.0 2.9E-35 6.2E-40 318.3 22.4 260 614-888 4-277 (280)
175 cd05035 PTKc_Axl_like Catalyti 100.0 5.1E-35 1.1E-39 315.1 24.3 255 618-887 1-272 (273)
176 cd06655 STKc_PAK2 Catalytic do 100.0 3.6E-35 7.8E-40 319.7 23.3 254 615-886 18-272 (296)
177 cd05112 PTKc_Itk Catalytic dom 100.0 4.8E-35 1E-39 312.1 23.6 251 616-884 4-255 (256)
178 KOG0199 ACK and related non-re 100.0 2.4E-36 5.2E-41 327.3 13.6 251 617-884 111-369 (1039)
179 cd06645 STKc_MAP4K3 Catalytic 100.0 2.2E-35 4.7E-40 316.9 21.0 254 615-883 8-265 (267)
180 PTZ00266 NIMA-related protein 100.0 2.6E-35 5.6E-40 348.7 23.6 259 613-885 10-297 (1021)
181 cd07875 STKc_JNK1 Catalytic do 100.0 2E-35 4.4E-40 331.7 21.7 261 614-885 22-320 (364)
182 cd06619 PKc_MKK5 Catalytic dom 100.0 1.9E-35 4.2E-40 319.3 20.6 246 617-885 2-255 (279)
183 cd05089 PTKc_Tie1 Catalytic do 100.0 3.4E-35 7.5E-40 320.4 22.8 259 616-891 2-279 (297)
184 cd05045 PTKc_RET Catalytic dom 100.0 3.8E-35 8.2E-40 319.0 23.0 258 617-889 1-288 (290)
185 cd07874 STKc_JNK3 Catalytic do 100.0 1.3E-35 2.8E-40 332.3 19.7 261 614-885 15-313 (355)
186 cd05053 PTKc_FGFR Catalytic do 100.0 2.8E-35 6E-40 320.7 21.8 260 614-888 10-292 (293)
187 cd05630 STKc_GRK6 Catalytic do 100.0 2.4E-35 5.3E-40 319.3 21.2 253 618-885 2-263 (285)
188 cd06643 STKc_SLK Catalytic dom 100.0 3.5E-35 7.6E-40 317.9 22.5 253 617-885 6-264 (282)
189 KOG4717 Serine/threonine prote 100.0 2.9E-36 6.3E-41 315.8 13.4 250 616-885 18-272 (864)
190 cd05073 PTKc_Hck Catalytic dom 100.0 7.4E-35 1.6E-39 311.4 24.5 254 615-886 5-259 (260)
191 cd05051 PTKc_DDR Catalytic dom 100.0 4E-35 8.7E-40 320.0 22.7 263 615-885 4-295 (296)
192 cd06628 STKc_MAPKKK_Byr2_like 100.0 6.4E-35 1.4E-39 313.3 23.9 249 617-883 1-264 (267)
193 cd05063 PTKc_EphR_A2 Catalytic 100.0 7.4E-35 1.6E-39 313.0 24.3 256 615-887 4-267 (268)
194 cd05623 STKc_MRCK_alpha Cataly 100.0 5.7E-35 1.2E-39 323.6 24.1 256 616-884 1-267 (332)
195 cd06631 STKc_YSK4 Catalytic do 100.0 5.1E-35 1.1E-39 313.7 22.6 251 617-883 1-262 (265)
196 cd05056 PTKc_FAK Catalytic dom 100.0 7.2E-35 1.6E-39 313.4 23.8 256 616-889 6-267 (270)
197 cd08219 STKc_Nek3 Catalytic do 100.0 5.3E-35 1.2E-39 311.6 22.6 250 617-883 1-252 (255)
198 PF00069 Pkinase: Protein kina 100.0 1.4E-35 3.1E-40 316.9 18.3 254 618-884 1-258 (260)
199 cd06615 PKc_MEK Catalytic doma 100.0 4.7E-35 1E-39 320.9 22.6 258 616-886 1-290 (308)
200 cd06658 STKc_PAK5 Catalytic do 100.0 3E-35 6.5E-40 319.7 20.9 252 619-888 25-277 (292)
201 cd05115 PTKc_Zap-70 Catalytic 100.0 8.5E-35 1.8E-39 310.1 24.0 246 624-887 3-255 (257)
202 cd06613 STKc_MAP4K3_like Catal 100.0 6.5E-35 1.4E-39 312.3 23.1 255 615-883 2-260 (262)
203 cd05055 PTKc_PDGFR Catalytic d 100.0 8.1E-35 1.8E-39 317.9 24.3 259 614-887 33-301 (302)
204 cd05061 PTKc_InsR Catalytic do 100.0 8.5E-35 1.8E-39 315.9 24.3 261 614-889 4-280 (288)
205 cd05109 PTKc_HER2 Catalytic do 100.0 8.8E-35 1.9E-39 314.3 24.3 258 615-890 6-271 (279)
206 cd05066 PTKc_EphR_A Catalytic 100.0 8.9E-35 1.9E-39 312.1 24.1 255 616-887 4-266 (267)
207 cd05032 PTKc_InsR_like Catalyt 100.0 5.9E-35 1.3E-39 315.4 22.8 256 615-885 5-276 (277)
208 cd06656 STKc_PAK3 Catalytic do 100.0 4E-35 8.7E-40 319.6 21.6 254 614-885 17-271 (297)
209 cd05088 PTKc_Tie2 Catalytic do 100.0 2.8E-35 6E-40 321.9 20.4 261 615-892 6-285 (303)
210 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 3.8E-35 8.3E-40 318.4 21.3 256 616-885 1-264 (286)
211 cd05097 PTKc_DDR_like Catalyti 100.0 5.9E-35 1.3E-39 318.3 22.8 259 615-885 4-294 (295)
212 cd07868 STKc_CDK8 Catalytic do 100.0 4.7E-35 1E-39 322.7 22.2 195 621-821 6-218 (317)
213 cd05101 PTKc_FGFR2 Catalytic d 100.0 8E-35 1.7E-39 318.7 23.9 261 614-889 13-298 (304)
214 cd06644 STKc_STK10_LOK Catalyt 100.0 9E-35 1.9E-39 316.4 24.1 255 615-885 11-271 (292)
215 cd05607 STKc_GRK7 Catalytic do 100.0 5E-35 1.1E-39 315.5 21.8 242 624-882 1-249 (277)
216 cd07873 STKc_PCTAIRE1 Catalyti 100.0 4.1E-35 8.8E-40 320.5 21.3 264 615-885 5-288 (301)
217 cd07878 STKc_p38beta_MAPK11 Ca 100.0 1.9E-35 4.1E-40 329.4 18.9 261 613-885 12-300 (343)
218 cd06637 STKc_TNIK Catalytic do 100.0 4.7E-35 1E-39 315.3 21.3 254 613-883 3-269 (272)
219 cd05095 PTKc_DDR2 Catalytic do 100.0 7.4E-35 1.6E-39 317.7 23.1 262 615-885 4-295 (296)
220 PTZ00284 protein kinase; Provi 100.0 2.2E-35 4.9E-40 341.7 20.0 264 610-885 123-440 (467)
221 cd06624 STKc_ASK Catalytic dom 100.0 7.1E-35 1.5E-39 313.1 22.4 254 614-883 6-265 (268)
222 cd07863 STKc_CDK4 Catalytic do 100.0 4.8E-35 1E-39 318.0 21.3 260 617-883 1-285 (288)
223 cd05098 PTKc_FGFR1 Catalytic d 100.0 4.6E-35 9.9E-40 321.0 21.0 261 615-890 17-302 (307)
224 cd05046 PTK_CCK4 Pseudokinase 100.0 1.4E-34 3.1E-39 312.0 24.5 256 616-885 5-274 (275)
225 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 3.7E-35 8E-40 318.0 19.9 262 618-887 6-281 (283)
226 cd05060 PTKc_Syk_like Catalyti 100.0 1.4E-34 3.1E-39 308.6 24.0 248 622-888 1-256 (257)
227 cd08221 STKc_Nek9 Catalytic do 100.0 1.4E-34 3.1E-39 308.5 23.7 251 617-884 1-254 (256)
228 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 1.2E-34 2.5E-39 314.2 23.3 264 616-887 4-283 (284)
229 cd05039 PTKc_Csk_like Catalyti 100.0 1.7E-34 3.7E-39 307.9 24.2 250 615-886 5-255 (256)
230 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 1.3E-34 2.8E-39 311.2 23.3 252 623-885 2-268 (269)
231 KOG0690 Serine/threonine prote 100.0 9.2E-36 2E-40 295.9 13.1 250 614-883 166-424 (516)
232 cd05040 PTKc_Ack_like Catalyti 100.0 1.1E-34 2.4E-39 309.6 22.5 247 623-885 2-256 (257)
233 cd05065 PTKc_EphR_B Catalytic 100.0 1.1E-34 2.3E-39 311.9 22.5 255 616-887 4-268 (269)
234 cd06611 STKc_SLK_like Catalyti 100.0 6.3E-35 1.4E-39 315.7 20.7 255 615-885 4-264 (280)
235 cd05586 STKc_Sck1_like Catalyt 100.0 1.7E-35 3.8E-40 327.7 16.7 243 624-885 1-255 (330)
236 cd06609 STKc_MST3_like Catalyt 100.0 8.9E-35 1.9E-39 313.4 21.8 250 617-885 2-253 (274)
237 cd06612 STKc_MST1_2 Catalytic 100.0 5.7E-35 1.2E-39 311.5 20.1 251 615-883 2-253 (256)
238 cd05082 PTKc_Csk Catalytic dom 100.0 2.3E-34 5.1E-39 306.8 24.8 249 615-886 5-255 (256)
239 cd05103 PTKc_VEGFR2 Catalytic 100.0 6.4E-35 1.4E-39 324.5 21.1 261 615-889 6-341 (343)
240 cd00192 PTKc Catalytic domain 100.0 1.7E-34 3.7E-39 308.8 23.6 249 622-885 1-262 (262)
241 cd05050 PTKc_Musk Catalytic do 100.0 1.2E-34 2.5E-39 314.9 22.6 257 614-885 3-287 (288)
242 PHA03207 serine/threonine kina 100.0 3.7E-35 8E-40 332.1 19.2 259 615-885 91-377 (392)
243 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 4.7E-35 1E-39 317.2 19.0 257 615-889 4-272 (284)
244 cd05047 PTKc_Tie Catalytic dom 100.0 1.7E-34 3.7E-39 310.3 23.2 249 623-888 2-269 (270)
245 KOG0584 Serine/threonine prote 100.0 1.1E-35 2.3E-40 322.7 13.6 244 622-884 46-297 (632)
246 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 1.7E-34 3.7E-39 312.8 23.2 256 616-887 4-283 (284)
247 cd06610 STKc_OSR1_SPAK Catalyt 100.0 1.6E-34 3.5E-39 310.1 22.8 258 616-883 1-264 (267)
248 cd07832 STKc_CCRK Catalytic do 100.0 1.3E-34 2.7E-39 314.4 21.8 262 617-884 1-283 (286)
249 cd05110 PTKc_HER4 Catalytic do 100.0 1.6E-34 3.4E-39 316.0 22.6 259 615-891 6-272 (303)
250 KOG1025 Epidermal growth facto 100.0 1.1E-35 2.4E-40 327.6 13.4 260 616-893 696-963 (1177)
251 cd07847 STKc_CDKL1_4 Catalytic 100.0 1.5E-34 3.3E-39 313.8 22.2 261 616-883 1-283 (286)
252 cd06638 STKc_myosinIIIA Cataly 100.0 9E-35 1.9E-39 315.5 20.4 263 608-885 10-285 (286)
253 cd05058 PTKc_Met_Ron Catalytic 100.0 2.3E-34 5E-39 308.0 23.3 250 622-888 1-260 (262)
254 cd05099 PTKc_FGFR4 Catalytic d 100.0 2.3E-34 4.9E-39 316.5 23.8 262 614-890 10-296 (314)
255 PHA03211 serine/threonine kina 100.0 1.1E-34 2.4E-39 329.7 21.9 259 615-885 168-457 (461)
256 cd06659 STKc_PAK6 Catalytic do 100.0 1.4E-34 3E-39 315.3 21.6 249 620-886 25-274 (297)
257 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 1.5E-34 3.3E-39 309.0 21.4 238 623-884 2-261 (262)
258 cd07841 STKc_CDK7 Catalytic do 100.0 2.4E-34 5.3E-39 314.1 23.3 262 617-885 1-284 (298)
259 cd06626 STKc_MEKK4 Catalytic d 100.0 3.1E-34 6.7E-39 307.4 23.6 252 617-883 1-261 (264)
260 KOG0983 Mitogen-activated prot 100.0 1.4E-35 3E-40 288.6 11.6 251 618-884 94-350 (391)
261 cd06632 STKc_MEKK1_plant Catal 100.0 2.5E-34 5.4E-39 307.0 22.5 248 617-883 1-255 (258)
262 cd05100 PTKc_FGFR3 Catalytic d 100.0 2.9E-34 6.3E-39 318.5 23.6 262 616-892 12-298 (334)
263 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 1.1E-34 2.3E-39 312.3 19.5 238 623-884 2-273 (274)
264 cd06642 STKc_STK25-YSK1 Cataly 100.0 9.3E-35 2E-39 313.7 19.2 250 616-885 4-255 (277)
265 cd05580 STKc_PKA Catalytic dom 100.0 1.5E-34 3.2E-39 314.3 20.6 247 616-885 1-256 (290)
266 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 5E-35 1.1E-39 312.2 16.6 238 623-884 2-257 (258)
267 cd05041 PTKc_Fes_like Catalyti 100.0 4.1E-34 8.8E-39 304.0 23.3 247 622-885 1-250 (251)
268 cd06640 STKc_MST4 Catalytic do 100.0 2.7E-34 5.8E-39 310.1 22.1 251 616-886 4-256 (277)
269 cd08223 STKc_Nek4 Catalytic do 100.0 2.5E-34 5.4E-39 306.8 21.6 250 617-883 1-254 (257)
270 cd06629 STKc_MAPKKK_Bck1_like 100.0 3.1E-34 6.7E-39 308.9 22.4 253 617-884 2-270 (272)
271 cd07846 STKc_CDKL2_3 Catalytic 100.0 1.2E-34 2.6E-39 314.6 19.3 261 616-883 1-283 (286)
272 cd07867 STKc_CDC2L6 Catalytic 100.0 3.8E-34 8.3E-39 315.5 23.6 194 622-821 7-218 (317)
273 cd06651 STKc_MEKK3 Catalytic d 100.0 3.4E-34 7.5E-39 307.3 22.6 249 617-883 3-261 (266)
274 KOG0596 Dual specificity; seri 100.0 1.6E-35 3.4E-40 314.7 11.8 256 613-884 358-628 (677)
275 cd06639 STKc_myosinIIIB Cataly 100.0 2.3E-34 4.9E-39 313.1 21.4 265 604-883 10-287 (291)
276 cd08227 PK_STRAD_alpha Pseudok 100.0 2.1E-34 4.5E-39 318.6 21.3 262 620-885 2-309 (327)
277 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 3.1E-34 6.8E-39 306.4 21.8 237 622-884 1-258 (259)
278 cd05574 STKc_phototropin_like 100.0 4.1E-34 8.9E-39 315.0 23.3 254 616-884 1-290 (316)
279 cd06648 STKc_PAK_II Catalytic 100.0 6.5E-34 1.4E-38 308.2 24.4 251 617-885 20-271 (285)
280 cd08218 STKc_Nek1 Catalytic do 100.0 4.1E-34 8.8E-39 305.0 22.3 250 617-883 1-253 (256)
281 cd05057 PTKc_EGFR_like Catalyt 100.0 6.5E-34 1.4E-38 307.5 24.2 258 615-890 6-271 (279)
282 cd05042 PTKc_Aatyk Catalytic d 100.0 4.6E-34 9.9E-39 307.0 22.8 251 623-884 2-267 (269)
283 cd07833 STKc_CDKL Catalytic do 100.0 2E-34 4.4E-39 313.1 19.6 262 616-883 1-285 (288)
284 cd06652 STKc_MEKK2 Catalytic d 100.0 5.6E-34 1.2E-38 305.5 22.8 251 616-884 2-262 (265)
285 smart00219 TyrKc Tyrosine kina 100.0 7E-34 1.5E-38 303.4 23.1 251 618-884 1-258 (258)
286 PHA03209 serine/threonine kina 100.0 2.6E-34 5.6E-39 321.1 20.4 192 614-819 64-256 (357)
287 cd06647 STKc_PAK_I Catalytic d 100.0 3.6E-34 7.7E-39 311.5 20.9 253 615-885 18-271 (293)
288 KOG0986 G protein-coupled rece 100.0 4.5E-35 9.8E-40 303.9 12.9 256 614-884 183-447 (591)
289 cd07860 STKc_CDK2_3 Catalytic 100.0 2.9E-34 6.3E-39 311.2 20.0 261 617-883 1-281 (284)
290 cd07839 STKc_CDK5 Catalytic do 100.0 1.6E-34 3.5E-39 313.2 18.0 261 617-884 1-282 (284)
291 KOG1035 eIF-2alpha kinase GCN2 100.0 4.4E-35 9.6E-40 337.5 13.9 256 612-883 475-871 (1351)
292 cd08528 STKc_Nek10 Catalytic d 100.0 6.9E-34 1.5E-38 305.6 22.5 253 617-885 1-268 (269)
293 cd05609 STKc_MAST Catalytic do 100.0 5.6E-34 1.2E-38 312.1 22.1 252 617-884 2-271 (305)
294 cd07870 STKc_PFTAIRE2 Catalyti 100.0 5.4E-34 1.2E-38 310.2 21.9 263 614-883 3-288 (291)
295 cd06636 STKc_MAP4K4_6 Catalyti 100.0 3.8E-34 8.3E-39 309.9 20.5 260 607-883 7-279 (282)
296 cd05044 PTKc_c-ros Catalytic d 100.0 4.1E-34 8.9E-39 307.4 20.6 248 623-885 2-268 (269)
297 cd06623 PKc_MAPKK_plant_like C 100.0 9.3E-34 2E-38 303.7 23.2 250 617-883 2-256 (264)
298 cd07844 STKc_PCTAIRE_like Cata 100.0 6.1E-34 1.3E-38 309.8 22.0 262 615-883 4-288 (291)
299 cd06630 STKc_MEKK1 Catalytic d 100.0 5E-34 1.1E-38 306.5 21.0 253 617-883 1-264 (268)
300 cd05086 PTKc_Aatyk2 Catalytic 100.0 8.3E-34 1.8E-38 304.6 22.4 252 623-885 2-267 (268)
301 cd05083 PTKc_Chk Catalytic dom 100.0 1.2E-33 2.5E-38 301.0 23.2 247 616-886 6-253 (254)
302 cd08220 STKc_Nek8 Catalytic do 100.0 1.5E-33 3.2E-38 300.7 23.5 249 617-883 1-253 (256)
303 cd06605 PKc_MAPKK Catalytic do 100.0 4.6E-34 9.9E-39 306.3 19.3 251 617-885 2-259 (265)
304 cd07845 STKc_CDK10 Catalytic d 100.0 1.5E-33 3.4E-38 309.3 23.4 267 614-887 5-294 (309)
305 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 1.2E-33 2.5E-38 306.4 22.1 256 616-887 4-283 (284)
306 cd05074 PTKc_Tyro3 Catalytic d 100.0 2.1E-33 4.5E-38 302.6 23.4 255 618-887 1-272 (273)
307 cd06641 STKc_MST3 Catalytic do 100.0 2.3E-33 5.1E-38 302.8 23.8 250 616-885 4-255 (277)
308 KOG4645 MAPKKK (MAP kinase kin 100.0 9.8E-36 2.1E-40 344.3 5.5 253 615-884 1234-1495(1509)
309 cd07837 STKc_CdkB_plant Cataly 100.0 9.2E-34 2E-38 309.1 20.7 263 616-883 1-291 (295)
310 cd06917 STKc_NAK1_like Catalyt 100.0 1.5E-33 3.3E-38 304.4 22.2 250 617-885 2-257 (277)
311 cd06608 STKc_myosinIII_like Ca 100.0 7.9E-34 1.7E-38 306.2 19.7 255 614-883 4-272 (275)
312 cd07850 STKc_JNK Catalytic dom 100.0 1.1E-33 2.3E-38 316.4 21.2 261 614-885 14-313 (353)
313 KOG4250 TANK binding protein k 100.0 2E-34 4.3E-39 316.6 14.9 265 618-887 15-310 (732)
314 cd05122 PKc_STE Catalytic doma 100.0 3.2E-33 6.9E-38 297.1 23.8 249 618-883 2-251 (253)
315 cd07836 STKc_Pho85 Catalytic d 100.0 1.4E-33 3E-38 305.9 21.3 262 617-883 1-281 (284)
316 cd08217 STKc_Nek2 Catalytic do 100.0 1.7E-33 3.7E-38 301.7 21.7 251 617-883 1-262 (265)
317 cd07843 STKc_CDC2L1 Catalytic 100.0 7.8E-34 1.7E-38 309.3 19.3 262 615-883 4-290 (293)
318 cd05578 STKc_Yank1 Catalytic d 100.0 5.1E-34 1.1E-38 304.6 17.3 247 617-883 1-255 (258)
319 cd07835 STKc_CDK1_like Catalyt 100.0 1.5E-33 3.3E-38 305.3 21.3 260 618-883 1-280 (283)
320 cd06614 STKc_PAK Catalytic dom 100.0 1.7E-33 3.7E-38 305.4 21.4 255 614-885 17-272 (286)
321 cd06617 PKc_MKK3_6 Catalytic d 100.0 2E-33 4.4E-38 304.4 21.6 254 616-885 1-263 (283)
322 cd07840 STKc_CDK9_like Catalyt 100.0 2.1E-33 4.5E-38 304.9 21.3 261 618-884 1-285 (287)
323 KOG0586 Serine/threonine prote 100.0 3.6E-34 7.9E-39 310.7 15.0 256 613-889 53-312 (596)
324 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 3.4E-33 7.3E-38 303.1 22.8 259 616-885 1-268 (287)
325 cd08225 STKc_Nek5 Catalytic do 100.0 2.6E-33 5.7E-38 298.9 21.3 250 617-883 1-254 (257)
326 cd06657 STKc_PAK4 Catalytic do 100.0 2.2E-33 4.9E-38 304.8 21.1 246 622-885 26-272 (292)
327 cd07855 STKc_ERK5 Catalytic do 100.0 1.3E-33 2.8E-38 313.3 19.6 266 615-887 4-298 (334)
328 KOG0607 MAP kinase-interacting 100.0 3.7E-34 7.9E-39 284.3 13.3 261 606-886 73-364 (463)
329 cd07849 STKc_ERK1_2_like Catal 100.0 1.6E-33 3.5E-38 312.7 20.1 262 615-884 4-293 (336)
330 cd06607 STKc_TAO Catalytic dom 100.0 3.7E-33 8E-38 305.9 22.5 250 615-886 14-270 (307)
331 cd05577 STKc_GRK Catalytic dom 100.0 3.5E-33 7.7E-38 301.4 21.6 247 624-885 1-256 (277)
332 cd07852 STKc_MAPK15 Catalytic 100.0 2.1E-33 4.5E-38 312.2 20.1 260 614-883 5-295 (337)
333 PHA03210 serine/threonine kina 100.0 8.3E-34 1.8E-38 329.4 17.6 268 614-885 146-456 (501)
334 cd07864 STKc_CDK12 Catalytic d 100.0 3.5E-33 7.6E-38 305.6 21.4 265 613-883 4-299 (302)
335 cd07865 STKc_CDK9 Catalytic do 100.0 5.4E-33 1.2E-37 305.4 22.6 265 614-884 10-308 (310)
336 cd06653 STKc_MEKK3_like_1 Cata 100.0 9.5E-33 2.1E-37 295.8 23.9 250 616-883 2-261 (264)
337 cd05572 STKc_cGK_PKG Catalytic 100.0 3.9E-33 8.5E-38 298.5 20.7 243 624-885 1-254 (262)
338 PLN00009 cyclin-dependent kina 100.0 6E-33 1.3E-37 302.4 22.4 263 616-884 2-285 (294)
339 KOG0612 Rho-associated, coiled 100.0 4.1E-34 9E-39 326.8 13.5 259 609-885 68-340 (1317)
340 cd05633 STKc_GRK3 Catalytic do 100.0 3.4E-33 7.3E-38 301.5 19.8 242 623-885 1-257 (279)
341 PHA03390 pk1 serine/threonine- 100.0 7.8E-33 1.7E-37 296.6 22.5 247 608-883 6-262 (267)
342 cd07842 STKc_CDK8_like Catalyt 100.0 3.4E-33 7.3E-38 307.9 20.2 263 617-883 1-313 (316)
343 PHA02882 putative serine/threo 100.0 4.6E-33 9.9E-38 302.8 20.9 258 615-884 11-293 (294)
344 cd06635 STKc_TAO1 Catalytic do 100.0 1.3E-32 2.9E-37 302.8 24.4 254 616-891 25-285 (317)
345 cd06627 STKc_Cdc7_like Catalyt 100.0 1.1E-32 2.4E-37 293.4 23.0 248 617-883 1-251 (254)
346 cd07831 STKc_MOK Catalytic dom 100.0 5.2E-33 1.1E-37 301.0 20.7 257 618-883 1-279 (282)
347 cd06606 STKc_MAPKKK Catalytic 100.0 1.5E-32 3.2E-37 293.3 23.9 252 617-884 1-258 (260)
348 KOG0666 Cyclin C-dependent kin 100.0 7E-34 1.5E-38 281.5 12.4 267 615-885 23-339 (438)
349 cd07834 STKc_MAPK Catalytic do 100.0 5.8E-33 1.3E-37 307.9 21.1 262 617-885 1-291 (330)
350 cd06616 PKc_MKK4 Catalytic dom 100.0 3.8E-33 8.2E-38 303.1 19.2 257 617-885 5-269 (288)
351 cd05613 STKc_MSK1_N N-terminal 100.0 6.3E-33 1.4E-37 301.6 20.8 249 617-883 1-268 (290)
352 cd05611 STKc_Rim15_like Cataly 100.0 6.9E-33 1.5E-37 296.2 20.7 242 622-883 2-251 (260)
353 cd05118 STKc_CMGC Catalytic do 100.0 5.1E-33 1.1E-37 301.3 19.9 259 618-883 1-280 (283)
354 cd05581 STKc_PDK1 Catalytic do 100.0 2.8E-33 6.2E-38 302.7 17.5 249 616-883 1-277 (280)
355 cd05583 STKc_MSK_N N-terminal 100.0 5.7E-33 1.2E-37 301.6 19.8 252 617-886 1-266 (288)
356 cd07879 STKc_p38delta_MAPK13 C 100.0 8.9E-33 1.9E-37 307.3 21.7 256 615-883 14-297 (342)
357 cd06618 PKc_MKK7 Catalytic dom 100.0 1.3E-32 2.9E-37 299.9 22.3 255 614-885 13-275 (296)
358 cd07877 STKc_p38alpha_MAPK14 C 100.0 1.2E-32 2.6E-37 306.5 22.3 265 609-885 10-302 (345)
359 cd05579 STKc_MAST_like Catalyt 100.0 3.8E-33 8.3E-38 299.0 17.5 244 624-884 1-255 (265)
360 cd08215 STKc_Nek Catalytic dom 100.0 2.6E-32 5.5E-37 291.2 23.8 251 617-883 1-255 (258)
361 cd07858 STKc_TEY_MAPK_plant Ca 100.0 6.6E-33 1.4E-37 307.8 19.5 261 615-885 4-293 (337)
362 cd08226 PK_STRAD_beta Pseudoki 100.0 1.7E-32 3.6E-37 303.5 22.6 258 623-885 5-310 (328)
363 KOG0604 MAP kinase-activated p 100.0 5.7E-34 1.2E-38 281.0 9.5 251 615-886 60-325 (400)
364 cd05606 STKc_beta_ARK Catalyti 100.0 1.4E-32 3.1E-37 296.6 20.8 242 623-885 1-257 (278)
365 KOG0669 Cyclin T-dependent kin 100.0 4.9E-35 1.1E-39 281.3 1.0 273 614-892 15-324 (376)
366 cd08216 PK_STRAD Pseudokinase 100.0 1.7E-32 3.7E-37 301.9 21.2 257 624-885 10-297 (314)
367 cd07880 STKc_p38gamma_MAPK12 C 100.0 1.3E-32 2.7E-37 306.1 20.2 259 614-884 13-299 (343)
368 KOG4236 Serine/threonine prote 100.0 7.3E-34 1.6E-38 298.6 9.4 247 621-885 569-821 (888)
369 cd08530 STKc_CNK2-like Catalyt 100.0 1.3E-32 2.8E-37 293.3 19.2 249 617-883 1-253 (256)
370 cd06634 STKc_TAO2 Catalytic do 100.0 2.9E-32 6.4E-37 298.7 22.5 252 615-888 14-272 (308)
371 KOG0696 Serine/threonine prote 100.0 1.8E-33 3.9E-38 287.7 11.8 242 614-875 347-593 (683)
372 cd07838 STKc_CDK4_6_like Catal 100.0 3.6E-32 7.7E-37 295.3 22.9 259 618-883 1-284 (287)
373 cd07866 STKc_BUR1 Catalytic do 100.0 1.5E-32 3.2E-37 302.0 20.1 261 615-883 7-308 (311)
374 cd07854 STKc_MAPK4_6 Catalytic 100.0 1.3E-32 2.7E-37 306.1 19.6 262 616-885 5-302 (342)
375 PTZ00024 cyclin-dependent prot 100.0 1.7E-32 3.8E-37 304.6 20.7 264 616-886 8-316 (335)
376 cd07851 STKc_p38 Catalytic dom 100.0 8.7E-33 1.9E-37 307.6 17.9 260 614-885 13-300 (343)
377 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 2.6E-32 5.7E-37 301.4 20.8 263 611-885 5-290 (328)
378 cd07830 STKc_MAK_like Catalyti 100.0 2.2E-32 4.7E-37 296.3 19.7 259 618-883 1-280 (283)
379 cd06633 STKc_TAO3 Catalytic do 100.0 8.1E-32 1.8E-36 295.8 23.5 246 618-885 23-275 (313)
380 KOG0614 cGMP-dependent protein 100.0 1.6E-33 3.6E-38 295.4 9.3 291 615-928 419-728 (732)
381 KOG1006 Mitogen-activated prot 100.0 1.2E-34 2.7E-39 281.1 0.3 256 617-883 65-327 (361)
382 KOG0200 Fibroblast/platelet-de 100.0 3.7E-32 8.1E-37 319.9 21.0 261 614-888 294-580 (609)
383 cd05610 STKc_MASTL Catalytic d 100.0 8.1E-32 1.8E-36 322.3 24.0 146 615-766 3-152 (669)
384 cd07829 STKc_CDK_like Catalyti 100.0 2.3E-32 4.9E-37 296.0 17.5 260 618-884 1-280 (282)
385 cd07857 STKc_MPK1 Catalytic do 100.0 6.9E-32 1.5E-36 299.1 20.9 262 617-885 1-294 (332)
386 cd08222 STKc_Nek11 Catalytic d 100.0 4.8E-32 1E-36 289.7 18.7 250 617-883 1-257 (260)
387 KOG0662 Cyclin-dependent kinas 100.0 1.8E-32 4E-37 250.3 12.6 260 617-883 3-283 (292)
388 cd05123 STKc_AGC Catalytic dom 100.0 7.4E-32 1.6E-36 286.4 18.4 240 624-883 1-247 (250)
389 KOG0587 Traf2- and Nck-interac 100.0 3.7E-32 8E-37 304.2 16.5 262 607-884 10-283 (953)
390 KOG0671 LAMMER dual specificit 100.0 9.6E-33 2.1E-37 282.5 9.8 261 615-885 88-408 (415)
391 KOG1024 Receptor-like protein 100.0 9E-32 1.9E-36 274.2 12.6 264 609-887 277-555 (563)
392 KOG0603 Ribosomal protein S6 k 100.0 5.2E-32 1.1E-36 295.7 11.4 243 615-886 321-566 (612)
393 cd05576 STKc_RPK118_like Catal 100.0 8.2E-31 1.8E-35 275.7 17.8 225 627-883 4-234 (237)
394 KOG1151 Tousled-like protein k 100.0 9.1E-32 2E-36 277.4 9.5 259 614-883 461-741 (775)
395 PLN03224 probable serine/threo 100.0 2.4E-30 5.1E-35 293.2 18.7 266 614-885 143-502 (507)
396 smart00220 S_TKc Serine/Threon 100.0 8.2E-30 1.8E-34 269.0 20.8 239 628-883 1-241 (244)
397 PLN03225 Serine/threonine-prot 100.0 2E-30 4.3E-35 302.3 17.5 263 614-885 130-452 (566)
398 KOG0608 Warts/lats-like serine 100.0 8.7E-31 1.9E-35 281.1 10.3 209 615-829 628-881 (1034)
399 KOG0664 Nemo-like MAPK-related 100.0 7.3E-32 1.6E-36 262.1 1.5 258 620-885 57-345 (449)
400 KOG1027 Serine/threonine prote 100.0 2.4E-31 5.1E-36 296.4 5.3 246 618-883 511-767 (903)
401 KOG0695 Serine/threonine prote 100.0 2.9E-30 6.2E-35 257.6 12.4 243 615-875 249-502 (593)
402 KOG0984 Mitogen-activated prot 100.0 1.6E-30 3.6E-35 243.5 7.7 213 613-830 43-263 (282)
403 KOG0665 Jun-N-terminal kinase 100.0 1.9E-29 4E-34 252.4 9.3 258 615-884 16-311 (369)
404 KOG0668 Casein kinase II, alph 100.0 4.7E-29 1E-33 237.0 9.2 256 615-884 37-323 (338)
405 KOG0576 Mitogen-activated prot 100.0 3.6E-29 7.7E-34 271.6 7.5 255 614-883 13-271 (829)
406 KOG4237 Extracellular matrix p 100.0 2.7E-30 5.9E-35 264.4 -1.3 422 53-503 60-498 (498)
407 KOG1152 Signal transduction se 100.0 1E-28 2.2E-33 263.7 8.9 197 616-821 561-771 (772)
408 KOG1290 Serine/threonine prote 100.0 1.5E-27 3.2E-32 250.7 16.7 132 615-751 77-221 (590)
409 KOG1345 Serine/threonine kinas 99.9 9.3E-28 2E-32 234.0 11.3 251 614-885 22-289 (378)
410 KOG0670 U4/U6-associated splic 99.9 5.1E-28 1.1E-32 254.9 9.1 263 614-884 430-747 (752)
411 cd00180 PKc Catalytic domain o 99.9 1.9E-26 4.2E-31 237.3 19.5 211 624-884 1-215 (215)
412 smart00221 STYKc Protein kinas 99.9 3.2E-26 6.9E-31 238.7 20.3 198 618-821 1-202 (225)
413 KOG1167 Serine/threonine prote 99.9 3.7E-26 8E-31 237.9 10.1 262 612-884 32-382 (418)
414 PLN03210 Resistant to P. syrin 99.9 2.6E-24 5.5E-29 272.4 25.6 347 55-432 551-904 (1153)
415 PLN03210 Resistant to P. syrin 99.9 4.6E-24 1E-28 270.0 24.7 345 127-503 551-903 (1153)
416 KOG4237 Extracellular matrix p 99.9 5.6E-27 1.2E-31 240.3 -4.1 298 29-338 49-359 (498)
417 PLN00181 protein SPA1-RELATED; 99.9 5.8E-25 1.3E-29 270.4 11.4 198 668-885 28-267 (793)
418 smart00750 KIND kinase non-cat 99.9 2.3E-24 5E-29 215.4 12.3 170 697-888 1-170 (176)
419 PRK15387 E3 ubiquitin-protein 99.9 1.6E-23 3.4E-28 245.3 15.4 264 42-372 205-468 (788)
420 KOG1164 Casein kinase (serine/ 99.9 8.7E-23 1.9E-27 223.8 19.3 262 617-891 19-301 (322)
421 PRK15387 E3 ubiquitin-protein 99.9 2.8E-23 6.1E-28 243.2 16.0 265 63-394 202-466 (788)
422 KOG0195 Integrin-linked kinase 99.9 7.7E-24 1.7E-28 206.4 6.7 249 618-888 192-447 (448)
423 PRK09188 serine/threonine prot 99.9 5.2E-23 1.1E-27 223.7 13.9 176 612-803 14-210 (365)
424 KOG1163 Casein kinase (serine/ 99.9 1.6E-23 3.5E-28 201.2 8.5 259 615-890 14-287 (341)
425 KOG1165 Casein kinase (serine/ 99.9 9.6E-22 2.1E-26 197.7 15.4 254 617-887 29-299 (449)
426 COG0515 SPS1 Serine/threonine 99.9 3.4E-20 7.3E-25 206.0 23.1 256 618-883 2-275 (384)
427 PRK15370 E3 ubiquitin-protein 99.8 1.6E-21 3.5E-26 230.3 11.0 222 88-338 180-401 (754)
428 PRK15370 E3 ubiquitin-protein 99.8 3.1E-21 6.7E-26 227.9 12.8 183 254-482 242-428 (754)
429 KOG0590 Checkpoint kinase and 99.8 8.7E-22 1.9E-26 228.5 5.5 255 620-885 322-587 (601)
430 PRK10359 lipopolysaccharide co 99.8 9E-21 1.9E-25 191.1 9.8 171 614-813 29-216 (232)
431 cd05147 RIO1_euk RIO kinase fa 99.8 3.7E-20 8.1E-25 185.4 11.5 139 622-769 3-168 (190)
432 KOG0617 Ras suppressor protein 99.8 7.4E-22 1.6E-26 180.0 -3.6 165 56-226 27-192 (264)
433 KOG0617 Ras suppressor protein 99.8 1.2E-21 2.5E-26 178.7 -3.0 155 323-482 31-186 (264)
434 KOG0603 Ribosomal protein S6 k 99.8 5.9E-21 1.3E-25 209.5 1.5 223 624-876 2-231 (612)
435 PRK12274 serine/threonine prot 99.8 2.4E-19 5.2E-24 176.3 12.6 185 620-822 6-210 (218)
436 cd05145 RIO1_like RIO kinase f 99.8 4.6E-19 9.9E-24 178.6 14.4 141 621-770 2-169 (190)
437 KOG1240 Protein kinase contain 99.8 7.7E-20 1.7E-24 209.8 6.7 251 617-887 24-295 (1431)
438 PF14531 Kinase-like: Kinase-l 99.8 1.5E-18 3.3E-23 180.3 12.7 234 616-874 12-288 (288)
439 KOG4158 BRPK/PTEN-induced prot 99.8 8E-19 1.7E-23 180.5 9.2 194 670-884 274-511 (598)
440 KOG1023 Natriuretic peptide re 99.8 1.2E-18 2.5E-23 192.4 10.5 216 666-891 1-228 (484)
441 cd00116 LRR_RI Leucine-rich re 99.8 1.1E-20 2.3E-25 208.6 -6.2 260 246-505 16-319 (319)
442 KOG0606 Microtubule-associated 99.8 2.2E-18 4.7E-23 198.2 10.7 208 615-875 82-304 (1205)
443 PRK10345 hypothetical protein; 99.7 9E-18 1.9E-22 169.4 13.2 137 618-765 4-156 (210)
444 cd00116 LRR_RI Leucine-rich re 99.7 5.7E-20 1.2E-24 202.7 -3.9 83 66-148 2-95 (319)
445 KOG1166 Mitotic checkpoint ser 99.7 2.4E-17 5.1E-22 194.5 15.4 199 610-817 692-901 (974)
446 smart00090 RIO RIO-like kinase 99.7 7.2E-17 1.6E-21 167.4 12.9 142 617-769 29-199 (237)
447 KOG1033 eIF-2alpha kinase PEK/ 99.7 3.6E-18 7.7E-23 184.2 2.7 177 686-883 330-512 (516)
448 PRK14879 serine/threonine prot 99.7 2.5E-16 5.5E-21 162.2 13.2 134 622-767 2-143 (211)
449 cd05144 RIO2_C RIO kinase fami 99.7 4.1E-16 9E-21 158.5 12.6 144 610-769 9-176 (198)
450 TIGR03724 arch_bud32 Kae1-asso 99.7 3E-16 6.4E-21 160.1 11.3 130 624-768 2-139 (199)
451 PRK09605 bifunctional UGMP fam 99.6 9.5E-16 2.1E-20 179.8 14.2 137 615-767 332-476 (535)
452 cd05120 APH_ChoK_like Aminogly 99.6 2.5E-14 5.3E-19 138.9 12.7 135 620-767 2-138 (155)
453 KOG0532 Leucine-rich repeat (L 99.6 1.5E-16 3.2E-21 171.4 -3.7 195 300-504 74-271 (722)
454 cd05119 RIO RIO kinase family, 99.5 2E-14 4.2E-19 145.1 11.1 136 621-769 2-165 (187)
455 KOG0590 Checkpoint kinase and 99.5 8.6E-16 1.9E-20 178.8 0.5 261 615-888 19-291 (601)
456 PLN03150 hypothetical protein; 99.5 1.1E-14 2.3E-19 172.6 9.6 141 2-147 379-528 (623)
457 PRK01723 3-deoxy-D-manno-octul 99.5 4.9E-14 1.1E-18 146.6 12.8 135 621-767 36-191 (239)
458 PLN03150 hypothetical protein; 99.5 1.1E-14 2.4E-19 172.3 8.7 119 422-540 419-539 (623)
459 KOG0532 Leucine-rich repeat (L 99.5 5.3E-16 1.1E-20 167.2 -3.5 180 323-511 73-252 (722)
460 COG4886 Leucine-rich repeat (L 99.4 1.7E-13 3.7E-18 155.6 8.0 180 276-463 115-295 (394)
461 COG4886 Leucine-rich repeat (L 99.4 3.8E-13 8.2E-18 152.7 8.0 201 281-490 97-298 (394)
462 KOG1266 Protein kinase [Signal 99.4 3.7E-13 8.1E-18 136.2 5.7 206 663-885 118-333 (458)
463 TIGR01982 UbiB 2-polyprenylphe 99.4 1.5E-12 3.3E-17 147.3 10.8 141 621-769 122-308 (437)
464 KOG0601 Cyclin-dependent kinas 99.3 3.9E-12 8.4E-17 141.0 7.8 247 616-883 114-379 (524)
465 KOG1259 Nischarin, modulator o 99.3 7.2E-13 1.6E-17 132.1 1.9 138 367-510 278-416 (490)
466 KOG1259 Nischarin, modulator o 99.2 1.5E-12 3.3E-17 129.8 1.2 131 348-484 283-414 (490)
467 cd05151 ChoK Choline Kinase (C 99.2 3.3E-11 7.1E-16 119.4 9.3 130 621-766 3-135 (170)
468 KOG0531 Protein phosphatase 1, 99.2 2.7E-12 5.9E-17 145.7 0.4 203 249-486 114-322 (414)
469 PRK04750 ubiB putative ubiquin 99.2 4.9E-11 1.1E-15 136.2 9.7 143 617-770 121-316 (537)
470 KOG0531 Protein phosphatase 1, 99.2 3.7E-12 8E-17 144.7 0.0 216 277-506 72-290 (414)
471 KOG0601 Cyclin-dependent kinas 99.2 2.5E-11 5.4E-16 134.6 6.1 250 611-886 260-517 (524)
472 KOG1909 Ran GTPase-activating 99.2 1.3E-12 2.8E-17 133.9 -3.9 234 37-289 29-310 (382)
473 KOG1243 Protein kinase [Genera 99.2 1.9E-10 4.1E-15 128.5 12.4 165 638-815 35-199 (690)
474 PF14580 LRR_9: Leucine-rich r 99.1 1.8E-11 3.8E-16 118.7 3.3 123 85-212 18-146 (175)
475 cd05146 RIO3_euk RIO kinase fa 99.1 4.8E-10 1E-14 111.0 13.4 136 622-769 3-175 (197)
476 KOG3207 Beta-tubulin folding c 99.1 8E-12 1.7E-16 131.5 0.3 137 297-434 142-284 (505)
477 KOG3207 Beta-tubulin folding c 99.1 1.3E-11 2.9E-16 129.9 1.5 208 84-314 119-339 (505)
478 PF14580 LRR_9: Leucine-rich r 99.1 3.5E-11 7.6E-16 116.6 3.0 16 491-506 111-126 (175)
479 COG3642 Mn2+-dependent serine/ 99.1 6.7E-10 1.4E-14 105.4 11.3 130 623-767 3-140 (204)
480 KOG1909 Ran GTPase-activating 99.1 5.6E-12 1.2E-16 129.4 -3.9 98 57-171 25-133 (382)
481 cd05154 ACAD10_11_like Acyl-Co 99.0 1.9E-09 4.1E-14 112.0 13.2 141 622-766 4-205 (223)
482 KOG4658 Apoptotic ATPase [Sign 99.0 1.7E-10 3.6E-15 139.5 5.9 151 60-213 521-675 (889)
483 KOG3087 Serine/threonine prote 99.0 2.3E-09 5E-14 100.9 11.7 142 620-766 11-164 (229)
484 KOG0606 Microtubule-associated 99.0 7.8E-11 1.7E-15 136.9 0.8 249 614-878 802-1084(1205)
485 KOG4658 Apoptotic ATPase [Sign 98.9 1.1E-09 2.5E-14 132.4 6.0 272 206-483 523-808 (889)
486 PF13855 LRR_8: Leucine rich r 98.8 2.6E-09 5.6E-14 85.2 3.5 59 63-121 2-60 (61)
487 KOG1859 Leucine-rich repeat pr 98.8 6.4E-11 1.4E-15 131.5 -8.2 130 398-534 165-297 (1096)
488 PF01163 RIO1: RIO1 family; I 98.8 4.4E-08 9.5E-13 96.9 12.5 126 631-769 1-157 (188)
489 PF13855 LRR_8: Leucine rich r 98.8 3.9E-09 8.5E-14 84.1 4.2 61 86-146 1-61 (61)
490 KOG3741 Poly(A) ribonuclease s 98.8 9.3E-08 2E-12 103.8 14.8 170 628-818 288-475 (655)
491 COG4248 Uncharacterized protei 98.8 2E-07 4.3E-12 98.6 16.3 263 619-892 14-305 (637)
492 COG0478 RIO-like serine/threon 98.7 6.9E-08 1.5E-12 97.4 10.7 135 618-767 93-251 (304)
493 PRK15123 lipopolysaccharide co 98.7 1.2E-07 2.6E-12 99.7 12.6 140 623-767 29-194 (268)
494 KOG1859 Leucine-rich repeat pr 98.7 1.1E-09 2.4E-14 121.9 -2.8 180 294-482 102-292 (1096)
495 KOG2137 Protein kinase [Signal 98.6 3.2E-08 6.9E-13 111.5 3.4 151 721-882 105-264 (700)
496 KOG4579 Leucine-rich repeat (L 98.6 3.3E-09 7.2E-14 94.4 -3.5 131 374-509 28-162 (177)
497 KOG2982 Uncharacterized conser 98.5 1.9E-08 4.1E-13 101.1 -1.1 77 279-362 184-262 (418)
498 PF06293 Kdo: Lipopolysacchari 98.5 8.7E-07 1.9E-11 90.3 10.7 107 656-768 55-171 (206)
499 KOG4579 Leucine-rich repeat (L 98.4 1.9E-08 4.2E-13 89.6 -2.3 113 373-489 53-166 (177)
500 KOG2982 Uncharacterized conser 98.4 5.6E-08 1.2E-12 97.8 -0.0 87 61-147 44-134 (418)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=1.4e-108 Score=1039.97 Aligned_cols=862 Identities=34% Similarity=0.553 Sum_probs=612.5
Q ss_pred CcccccccCccccCCCCCCCCCCCCCCcceeEecCCCCcEEEEEcCCCCCccccCCCcCCCCCCCEEEeeCCcccccCCC
Q 002278 1 MAIKASFSNLANVLLDWDDVHNSDFCSWRGVFCDNSSLSVVSLNLSSLNLGGEISPSIGDLRNLQSIDFQGNKLTGQIPD 80 (943)
Q Consensus 1 ~~~~~~~~~~~~~~~~w~~~~~~~~c~w~gv~c~~~~~~v~~L~l~~~~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~ 80 (943)
++||+++.||.+++++|+. +.|||.|.||.|++. .+|+.|||++|++++.+++++..+++|+.|+|++|++++.+|.
T Consensus 35 ~~~~~~~~~~~~~~~~w~~--~~~~c~w~gv~c~~~-~~v~~L~L~~~~i~~~~~~~~~~l~~L~~L~Ls~n~~~~~ip~ 111 (968)
T PLN00113 35 LSFKSSINDPLKYLSNWNS--SADVCLWQGITCNNS-SRVVSIDLSGKNISGKISSAIFRLPYIQTINLSNNQLSGPIPD 111 (968)
T ss_pred HHHHHhCCCCcccCCCCCC--CCCCCcCcceecCCC-CcEEEEEecCCCccccCChHHhCCCCCCEEECCCCccCCcCCh
Confidence 4689999999899999974 579999999999864 5899999999999999998999999999999999999888887
Q ss_pred Ccc-CCCCCcEEeccCCCcCC----------------------ccchhccccccceEEEecCcccccCCCcccCCCCCCc
Q 002278 81 EIG-NCGSLVHIELSDNSLYG----------------------DIPFSISKLKQLEFLNLKNNQLTGPIPSTLTQIPNLK 137 (943)
Q Consensus 81 ~~~-~l~~L~~L~Ls~N~l~~----------------------~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~ 137 (943)
.+. .+++|++|+|++|++++ .+|..|+.+++|++|+|++|.+.+.+|..|.++++|+
T Consensus 112 ~~~~~l~~L~~L~Ls~n~l~~~~p~~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~ 191 (968)
T PLN00113 112 DIFTTSSSLRYLNLSNNNFTGSIPRGSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLE 191 (968)
T ss_pred HHhccCCCCCEEECcCCccccccCccccCCCCEEECcCCcccccCChHHhcCCCCCEEECccCcccccCChhhhhCcCCC
Confidence 644 66677777666666654 4455555666666666666666656666666666666
Q ss_pred EEEEeccccccccchhccccccceeccccCCccCCCCCcccccccccceeeccceecccccCCCCcCCCcccEEEeeccc
Q 002278 138 TLDLARNQLTGEIPRLIYWNEVLQYLGLRGNALTGMLSPDMCQLTGLWYFDVRGNNLTGTIPDSIGNCTSFEILDISYNQ 217 (943)
Q Consensus 138 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~l~~l~~L~~L~Ls~N~ 217 (943)
+|+|++|++.+.+|..+..+++|++|+|++|.+.+..|..+..+++|++|++++|++++.+|..|+++++|++|++++|+
T Consensus 192 ~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~ 271 (968)
T PLN00113 192 FLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNK 271 (968)
T ss_pred eeeccCCCCcCcCChHHcCcCCccEEECcCCccCCcCChhHhcCCCCCEEECcCceeccccChhHhCCCCCCEEECcCCe
Confidence 66666666665566666666666666666666666666666666666666666666666666666666666666666666
Q ss_pred ccCcCCCCCC-cceEeEEEecCccccccCCccccccCCCcEEecCCCCCCCCCCcccCCCCCcceEEecCCCCCCCCCCC
Q 002278 218 ITGEIPYNIG-FLQVATLSLQGNKLTGKIPEVIGLMQALAVLDLSENELVGPIPPILGNLSYTGKLYLHGNKLTGPIPPE 296 (943)
Q Consensus 218 l~~~~~~~~~-~~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 296 (943)
+++.+|..+. ..+|+.|++++|.+.+.+|..+..+++|+.|++++|.+.+..|..+..+++|+.|+|++|.+++.+|..
T Consensus 272 l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~ 351 (968)
T PLN00113 272 LSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKN 351 (968)
T ss_pred eeccCchhHhhccCcCEEECcCCeeccCCChhHcCCCCCcEEECCCCccCCcCChhHhcCCCCCEEECcCCCCcCcCChH
Confidence 6655554443 335666666666666666666666666666666666666666666666666666666666666666666
Q ss_pred cCCCCcCcEEEcccCccccccccccCCcccceEEEccccccCCcCcccccCCCcCcEEEeeCCcccCcccccccccCccc
Q 002278 297 LGNMSKLSYLQLQNNQLVGTIPAELGKLEQLFELNLADNNLEGPIPHNISSCTALNQFNVHGNRLSGAIPSSFRNLGSLT 376 (943)
Q Consensus 297 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 376 (943)
+..+++|+.|++++|++.+.+|..+..+++|+.|++++|++.+.+|..+..+++|+.|++++|++++..|..|..+++|+
T Consensus 352 l~~~~~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~ 431 (968)
T PLN00113 352 LGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVY 431 (968)
T ss_pred HhCCCCCcEEECCCCeeEeeCChhHhCcCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEeeeECChhHhcCCCCC
Confidence 66666666666666666655555555555555555555555555555555555555555555555555555555555555
Q ss_pred eeeccCCcCCCCCCCCCC-----------------------CCCCccEEecCCCcCCCccCCCcccccccceeecccccc
Q 002278 377 YLNLSRNNFKGKVPTELG-----------------------RIINLDTLDLSVNNFSGSVPASIGDLEHLLTLNLSRNHL 433 (943)
Q Consensus 377 ~L~L~~N~l~~~~~~~~~-----------------------~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 433 (943)
.|++++|.+++..|..+. ...+|+.|++++|++++.+|..+.++++|+.|+|++|++
T Consensus 432 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l 511 (968)
T PLN00113 432 FLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSFGSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKL 511 (968)
T ss_pred EEECcCCcccCccChhhccCCCCcEEECcCceeeeecCcccccccceEEECcCCccCCccChhhhhhhccCEEECcCCcc
Confidence 555555544444333222 235677777778888888888888999999999999999
Q ss_pred cccCCccccCCCccceecccCccccccCChhhhcccccceecccCcccCCCCCCcCccccCCcccccCCccccccCCCCc
Q 002278 434 NGLLPAEFGNLRSIQTIDMSFNQLSGSIPAELGQLQNIISLILNNNNLQGGIPDQLSNCFSLSNLNVSYNNLSGIIPPIR 513 (943)
Q Consensus 434 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~ 513 (943)
++.+|..|.++++|+.|+|++|++++.+|..|..+++|+.|+|++|++++.+|..+.++++|+.|++++|+++|.+|...
T Consensus 512 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p~~~ 591 (968)
T PLN00113 512 SGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLPSTG 591 (968)
T ss_pred eeeCChHHcCccCCCEEECCCCcccccCChhHhCcccCCEEECCCCcccccCChhHhcCcccCEEeccCCcceeeCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred ccCcCCCCccccCCCCCCCCCC---CccCCCccccccccceeeeeeeehhHHHHHHHH-HHHHhhhhccchhhh-cCCcc
Q 002278 514 NFSRFSSNSFIGNPLLCGNWIG---SICGPSVTKARVMFSRTAVVCMVLGFITLLVMA-AIAVYKSNQQRQQLI-TGSRK 588 (943)
Q Consensus 514 ~~~~~~~~~~~~Np~~c~~~~~---~~c~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~ 588 (943)
.+..+...++.|||.+||.... ..|.... +.. ...++++++++++++++++ +++++.+++++++.. ....
T Consensus 592 ~~~~~~~~~~~~n~~lc~~~~~~~~~~c~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 666 (968)
T PLN00113 592 AFLAINASAVAGNIDLCGGDTTSGLPPCKRVR---KTP-SWWFYITCTLGAFLVLALVAFGFVFIRGRNNLELKRVENE- 666 (968)
T ss_pred hhcccChhhhcCCccccCCccccCCCCCcccc---ccc-eeeeehhHHHHHHHHHHHHHHHHHHHHhhhcccccccccc-
Confidence 8889999999999999986542 3453221 111 1222333333333332222 222222222211111 0100
Q ss_pred ccCCCCceeeee-ccccccCHHHHHHHhhccccceEEeeeceEEEEEEEec-CCceEEEEEecccCcccHHHHHHHHHHH
Q 002278 589 SMLGPPKLVILH-MDMAIHTFDDIMRSTENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQYPHNLREFETELETI 666 (943)
Q Consensus 589 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l 666 (943)
.+........ ......+++++ ...|...++||+|+||.||+|+.+ ++..||||++..... ...+|++.+
T Consensus 667 --~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~----~~~~~~~~l 737 (968)
T PLN00113 667 --DGTWELQFFDSKVSKSITINDI---LSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS----IPSSEIADM 737 (968)
T ss_pred --cccccccccccccchhhhHHHH---HhhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc----ccHHHHHHH
Confidence 0000000000 00112233333 456778889999999999999974 688999999864432 223568889
Q ss_pred hcCCCCCcceeeeEEecCCcceEEEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCC
Q 002278 667 GSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKS 746 (943)
Q Consensus 667 ~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp 746 (943)
++++|||||+++++|.+++..++||||+++|+|.++++ .++|.++.+++.|+|+|++|||+.+.++|+||||||
T Consensus 738 ~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~------~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp 811 (968)
T PLN00113 738 GKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLR------NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSP 811 (968)
T ss_pred hhCCCCCcceEEEEEEcCCCCEEEEeCCCCCcHHHHHh------cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCH
Confidence 99999999999999999999999999999999999995 278999999999999999999976667999999999
Q ss_pred ccEEECCCCceeecccccccccCCCCCceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCC----
Q 002278 747 SNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNE---- 822 (943)
Q Consensus 747 ~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~---- 822 (943)
+||+++.++.+++. ||.+...... ....|++.|+|||++.+..++.++|||||||++|||+||+.||+..
T Consensus 812 ~Nil~~~~~~~~~~-~~~~~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~ 885 (968)
T PLN00113 812 EKIIIDGKDEPHLR-LSLPGLLCTD-----TKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVH 885 (968)
T ss_pred HhEEECCCCceEEE-eccccccccC-----CCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCC
Confidence 99999998888875 6655433221 1225789999999999999999999999999999999999998632
Q ss_pred ccHHHHHHHhccccccccccCcccccC-ccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcCCCC
Q 002278 823 SNLHQLIMSKADDNTVMEAVDPEVSVT-CVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLVSLLPAP 891 (943)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~~~~~~ 891 (943)
.....|.............+++.+... .....+..++.+++.+||+.||++||||.|+++.|+.+....
T Consensus 886 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~~~ 955 (968)
T PLN00113 886 GSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASRSS 955 (968)
T ss_pred CcHHHHHHHhcCccchhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhccc
Confidence 233444443333223333344444222 123455667889999999999999999999999999876543
No 2
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=1.2e-56 Score=567.06 Aligned_cols=467 Identities=36% Similarity=0.608 Sum_probs=385.4
Q ss_pred cEEEEEcCCCCCccccCCCcCCCCCCCEEEeeCCcccccCCCCccCCCCCcEEeccCCCcCCccchhccccccceEEEec
Q 002278 39 SVVSLNLSSLNLGGEISPSIGDLRNLQSIDFQGNKLTGQIPDEIGNCGSLVHIELSDNSLYGDIPFSISKLKQLEFLNLK 118 (943)
Q Consensus 39 ~v~~L~l~~~~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 118 (943)
+++.|+|++|.+++.+|..++.+++|++|+|++|.+++.+|..|+++++|++|+|++|++.+.+|..|+++++|++|+|+
T Consensus 141 ~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~ 220 (968)
T PLN00113 141 NLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLG 220 (968)
T ss_pred CCCEEECcCCcccccCChHHhcCCCCCEEECccCcccccCChhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECc
Confidence 45667777777777777777777777777777777777777777777777777777777777777777777777777777
Q ss_pred CcccccCCCcccCCCCCCcEEEEeccccccccchhccccccceeccccCCccCCCCCcccccccccceeeccceeccccc
Q 002278 119 NNQLTGPIPSTLTQIPNLKTLDLARNQLTGEIPRLIYWNEVLQYLGLRGNALTGMLSPDMCQLTGLWYFDVRGNNLTGTI 198 (943)
Q Consensus 119 ~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~ 198 (943)
+|++++.+|..|.++++|++|+|++|++++.+|..+..+++|++|+|++|++.+..|..+..+++|++|+|++|.+.+.+
T Consensus 221 ~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~ 300 (968)
T PLN00113 221 YNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEI 300 (968)
T ss_pred CCccCCcCChhHhcCCCCCEEECcCceeccccChhHhCCCCCCEEECcCCeeeccCchhHhhccCcCEEECcCCeeccCC
Confidence 77777777777777777777777777777777777777777777777777777777777777777777777777777777
Q ss_pred CCCCcCCCcccEEEeecccccCcCCCCCC-cceEeEEEecCccccccCCccccccCCCcEEecCCCCCCCCCCcccCCCC
Q 002278 199 PDSIGNCTSFEILDISYNQITGEIPYNIG-FLQVATLSLQGNKLTGKIPEVIGLMQALAVLDLSENELVGPIPPILGNLS 277 (943)
Q Consensus 199 ~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~-~~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 277 (943)
|..+.++++|++|++++|.+++.+|..+. ..+|+.|++++|.+.+.+|..++.+++|+.|++++|++.+..|..+..++
T Consensus 301 p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~~~~~ 380 (968)
T PLN00113 301 PELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSG 380 (968)
T ss_pred ChhHcCCCCCcEEECCCCccCCcCChhHhcCCCCCEEECcCCCCcCcCChHHhCCCCCcEEECCCCeeEeeCChhHhCcC
Confidence 77777777777777777777776665553 34677888888888777777777788888888888888777777777778
Q ss_pred CcceEEecCCCCCCCCCCCcCCCCcCcEEEcccCccccccccccCCcccceEEEccccccCCcCcccccCCCcCcEEEee
Q 002278 278 YTGKLYLHGNKLTGPIPPELGNMSKLSYLQLQNNQLVGTIPAELGKLEQLFELNLADNNLEGPIPHNISSCTALNQFNVH 357 (943)
Q Consensus 278 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 357 (943)
+|+.|++++|++.+.+|..+..+++|+.|++++|++++..|..|..+++|+.|++++|++.+.+|..+..+++|+.|+++
T Consensus 381 ~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 460 (968)
T PLN00113 381 NLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLA 460 (968)
T ss_pred CCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccCccChhhccCCCCcEEECc
Confidence 88888888888888888888888888888888888888888888888888888888888888888888888889999999
Q ss_pred CCcccCcccccccccCccceeeccCCcCCCCCCCCCCCCCCccEEecCCCcCCCccCCCcccccccceeecccccccccC
Q 002278 358 GNRLSGAIPSSFRNLGSLTYLNLSRNNFKGKVPTELGRIINLDTLDLSVNNFSGSVPASIGDLEHLLTLNLSRNHLNGLL 437 (943)
Q Consensus 358 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 437 (943)
+|++.+.+|..+ ..++|+.|+|++|++++..|..+..+++|+.|+|++|++.+.+|..+..+++|++|+|++|.+++.+
T Consensus 461 ~n~~~~~~p~~~-~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 539 (968)
T PLN00113 461 RNKFFGGLPDSF-GSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQI 539 (968)
T ss_pred CceeeeecCccc-ccccceEEECcCCccCCccChhhhhhhccCEEECcCCcceeeCChHHcCccCCCEEECCCCcccccC
Confidence 998888777765 4588999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCCccceecccCccccccCChhhhcccccceecccCcccCCCCCCcCccccCCcccccCCcc-ccc
Q 002278 438 PAEFGNLRSIQTIDMSFNQLSGSIPAELGQLQNIISLILNNNNLQGGIPDQLSNCFSLSNLNVSYNN-LSG 507 (943)
Q Consensus 438 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~-l~~ 507 (943)
|..|.++++|+.|+|++|++++.+|..+..+.+|+.|++++|++++.+|.. .....+....+.+|+ +.|
T Consensus 540 p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p~~-~~~~~~~~~~~~~n~~lc~ 609 (968)
T PLN00113 540 PASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLPST-GAFLAINASAVAGNIDLCG 609 (968)
T ss_pred ChhHhCcccCCEEECCCCcccccCChhHhcCcccCEEeccCCcceeeCCCc-chhcccChhhhcCCccccC
Confidence 999999999999999999999999999999999999999999999999964 334455566677776 444
No 3
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.9e-49 Score=429.70 Aligned_cols=287 Identities=48% Similarity=0.777 Sum_probs=248.4
Q ss_pred cccccCHHHHHHHhhccccceEEeeeceEEEEEEEecCCceEEEEEecccCcccHHHHHHHHHHHhcCCCCCcceeeeEE
Q 002278 602 DMAIHTFDDIMRSTENLSEKYIVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYA 681 (943)
Q Consensus 602 ~~~~~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~ 681 (943)
....++++++..+|++|...+.||+|+||.||+|...+++.||||++........++|.+|++++.+++|||+|+++|||
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC 140 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYC 140 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEE
Confidence 35668999999999999999999999999999999999999999988655432156699999999999999999999999
Q ss_pred ecCCc-ceEEEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeec
Q 002278 682 LSPYG-NLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLS 760 (943)
Q Consensus 682 ~~~~~-~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~ 760 (943)
.+.+. .++||||+++|+|.++++..... .++|.++.+||.++|+||+|||+.+.+.||||||||+|||+|+++.+||+
T Consensus 141 ~e~~~~~~LVYEym~nGsL~d~L~~~~~~-~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKls 219 (361)
T KOG1187|consen 141 LEGGEHRLLVYEYMPNGSLEDHLHGKKGE-PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLS 219 (361)
T ss_pred ecCCceEEEEEEccCCCCHHHHhCCCCCC-CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEcc
Confidence 99984 99999999999999999865443 89999999999999999999999988899999999999999999999999
Q ss_pred ccccccccCCCCCceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCC-----CccHHHHHHHhccc
Q 002278 761 DFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDN-----ESNLHQLIMSKADD 835 (943)
Q Consensus 761 DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~-----~~~~~~~~~~~~~~ 835 (943)
|||+|+..+.......+...||.+|+|||+...+..+.|+|||||||++.|++||+.|.+. ......|.......
T Consensus 220 DFGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~ 299 (361)
T KOG1187|consen 220 DFGLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEE 299 (361)
T ss_pred CccCcccCCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHC
Confidence 9999976654111111111699999999999999999999999999999999999998873 23467777777777
Q ss_pred cccccccCccccc-CccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcCC
Q 002278 836 NTVMEAVDPEVSV-TCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLVSLLP 889 (943)
Q Consensus 836 ~~~~~~~~~~~~~-~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~~~~ 889 (943)
....+.+||.+.. ......++.++..++..|++.+|.+||+|.+|++.|+.+..
T Consensus 300 ~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~ 354 (361)
T KOG1187|consen 300 GKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGILS 354 (361)
T ss_pred cchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhcc
Confidence 7889999999873 33323678889999999999999999999999999965443
No 4
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1e-45 Score=400.10 Aligned_cols=251 Identities=24% Similarity=0.361 Sum_probs=223.4
Q ss_pred hccccceEEeeeceEEEEEEEe-cCCceEEEEEeccc---CcccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEE
Q 002278 616 ENLSEKYIVGYGASSTVYKCAL-KNSRPIAVKKLYNQ---YPHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFY 691 (943)
Q Consensus 616 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 691 (943)
..|...+.||+|||+.||.++. ..|..||+|++.+. .+...+.+.+|+++.+.|+|||||+++++|++....|+|.
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 6799999999999999999998 67999999999663 3556778999999999999999999999999999999999
Q ss_pred EEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCC
Q 002278 692 DYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTA 771 (943)
Q Consensus 692 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~ 771 (943)
|+|..|+|..+++ ...++++.++..+.+||+.|+.|||+. +|+|||||-.|++++++.+|||+|||+|..+...
T Consensus 98 ELC~~~sL~el~K---rrk~ltEpEary~l~QIv~GlkYLH~~---~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~ 171 (592)
T KOG0575|consen 98 ELCHRGSLMELLK---RRKPLTEPEARYFLRQIVEGLKYLHSL---GIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYD 171 (592)
T ss_pred EecCCccHHHHHH---hcCCCCcHHHHHHHHHHHHHHHHHHhc---CceecccchhheeecCcCcEEecccceeeeecCc
Confidence 9999999999997 456799999999999999999999999 9999999999999999999999999999998755
Q ss_pred CCceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccccCcc
Q 002278 772 MPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCV 851 (943)
Q Consensus 772 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 851 (943)
.... .+.+|||.|.|||++....++..+||||+||++|.|++|++||+...-.+.+..+...+..++..+.
T Consensus 172 ~Erk-~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~~~Y~~P~~ls-------- 242 (592)
T KOG0575|consen 172 GERK-KTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKLNEYSMPSHLS-------- 242 (592)
T ss_pred cccc-ceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHhcCcccccccC--------
Confidence 3333 4468999999999999999999999999999999999999999988777777777666665555332
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhh
Q 002278 852 DLSAVRKTFQLALLCTKRYPSERPTMQEVARVLVS 886 (943)
Q Consensus 852 ~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~ 886 (943)
....++|..+|+++|.+|||+++|+.|-.-
T Consensus 243 -----~~A~dLI~~lL~~~P~~Rpsl~~vL~h~Ff 272 (592)
T KOG0575|consen 243 -----AEAKDLIRKLLRPNPSERPSLDEVLDHPFF 272 (592)
T ss_pred -----HHHHHHHHHHhcCCcccCCCHHHHhcCHhh
Confidence 234589999999999999999999997654
No 5
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-45 Score=377.52 Aligned_cols=251 Identities=27% Similarity=0.426 Sum_probs=209.4
Q ss_pred hccccceEEeeeceEEEEEEEec-CCceEEEEEeccc-CcccHHHHHHHHHHHhcCCCCCcceeeeEEecCCc-ceEEEE
Q 002278 616 ENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQ-YPHNLREFETELETIGSIRHRNIVSLHGYALSPYG-NLLFYD 692 (943)
Q Consensus 616 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-~~lv~e 692 (943)
.+++....||+|..|+||++.++ +++.+|+|++... .+...+++.+|+++++..+||+||.+||.|..+.. ..|+||
T Consensus 79 ~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mE 158 (364)
T KOG0581|consen 79 SDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICME 158 (364)
T ss_pred HHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehh
Confidence 34566778999999999999988 4677899998433 35566789999999999999999999999999984 999999
Q ss_pred EccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhh-CCCCCeEecCCCCccEEECCCCceeecccccccccCCC
Q 002278 693 YMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHH-DCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTA 771 (943)
Q Consensus 693 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~ 771 (943)
||.+|+|.+++. ..+++++....+++.+|++||.|||+ + +||||||||+|||++..|+|||||||.++.+...
T Consensus 159 YMDgGSLd~~~k---~~g~i~E~~L~~ia~~VL~GL~YLh~~~---~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS 232 (364)
T KOG0581|consen 159 YMDGGSLDDILK---RVGRIPEPVLGKIARAVLRGLSYLHEER---KIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS 232 (364)
T ss_pred hcCCCCHHHHHh---hcCCCCHHHHHHHHHHHHHHHHHHhhcc---CeeeccCCHHHeeeccCCCEEeccccccHHhhhh
Confidence 999999999987 34679999999999999999999996 6 9999999999999999999999999999987655
Q ss_pred CCceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCC----ccHHHHHHHhccccccccccCcccc
Q 002278 772 MPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNE----SNLHQLIMSKADDNTVMEAVDPEVS 847 (943)
Q Consensus 772 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 847 (943)
.....+||..|||||.+.+..|+.++||||||++++|+++|+.||... .....+......+ ..|.++
T Consensus 233 ---~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~------ppP~lP 303 (364)
T KOG0581|consen 233 ---IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDE------PPPRLP 303 (364)
T ss_pred ---hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcC------CCCCCC
Confidence 223456999999999999999999999999999999999999999764 2222322222221 122222
Q ss_pred cCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 002278 848 VTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLV 885 (943)
Q Consensus 848 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~ 885 (943)
.. ....++..++..|+++||.+||+++|+++|-+
T Consensus 304 ~~----~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~Hpf 337 (364)
T KOG0581|consen 304 EG----EFSPEFRSFVSCCLRKDPSERPSAKQLLQHPF 337 (364)
T ss_pred cc----cCCHHHHHHHHHHhcCCcccCCCHHHHhcCHH
Confidence 21 12256778999999999999999999999865
No 6
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=5e-45 Score=395.55 Aligned_cols=259 Identities=34% Similarity=0.490 Sum_probs=214.5
Q ss_pred ccccceEEeeeceEEEEEEEecCCceEEEEEecccCc--ccHHHHHHHHHHHhcCCCCCcceeeeEEecCC-cceEEEEE
Q 002278 617 NLSEKYIVGYGASSTVYKCALKNSRPIAVKKLYNQYP--HNLREFETELETIGSIRHRNIVSLHGYALSPY-GNLLFYDY 693 (943)
Q Consensus 617 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~lv~e~ 693 (943)
.+.....||+|+||+||+|.++....||||++..... ...++|.+|+.++++++|||||+++|+|.++. ..++||||
T Consensus 42 ~l~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy 121 (362)
T KOG0192|consen 42 ELPIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEY 121 (362)
T ss_pred HhhhhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEe
Confidence 3344455999999999999999666699999976432 22568999999999999999999999999987 78999999
Q ss_pred ccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCC-eEecCCCCccEEECCCC-ceeecccccccccCCC
Q 002278 694 MVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPR-IIHRDVKSSNILIDENF-DAHLSDFGIARCIPTA 771 (943)
Q Consensus 694 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~-ivH~Dlkp~Nill~~~~-~~kl~DFGla~~~~~~ 771 (943)
+++|+|.++++.. ....+++..++.++.|||+||.|||++ + ||||||||+|||++.++ ++||+|||+++.....
T Consensus 122 ~~~GsL~~~l~~~-~~~~l~~~~~l~~aldiArGm~YLH~~---~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~ 197 (362)
T KOG0192|consen 122 MPGGSLSVLLHKK-RKRKLPLKVRLRIALDIARGMEYLHSE---GPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVIS 197 (362)
T ss_pred CCCCcHHHHHhhc-ccCCCCHHHHHHHHHHHHHHHHHHhcC---CCeeecccChhhEEEcCCCCEEEECCCccceeeccc
Confidence 9999999999853 356899999999999999999999999 7 99999999999999997 9999999999876543
Q ss_pred CCceeeeEecccceeCccccc--cCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccccC
Q 002278 772 MPHASTFVLGTIGYIDPEYAH--TSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVT 849 (943)
Q Consensus 772 ~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 849 (943)
. ...+...||+.|||||++. ...|+.|+||||||+++|||+||+.||.+... .+.+...... ..+|.++..
T Consensus 198 ~-~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~-~~~~~~v~~~-----~~Rp~~p~~ 270 (362)
T KOG0192|consen 198 K-TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAP-VQVASAVVVG-----GLRPPIPKE 270 (362)
T ss_pred c-ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCH-HHHHHHHHhc-----CCCCCCCcc
Confidence 2 2223356999999999999 56999999999999999999999999998776 3333332221 222333322
Q ss_pred ccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcCCCC
Q 002278 850 CVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLVSLLPAP 891 (943)
Q Consensus 850 ~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~~~~~~ 891 (943)
....+..++..||+.||++||++.+++..|+.+....
T Consensus 271 -----~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~~ 307 (362)
T KOG0192|consen 271 -----CPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMSHI 307 (362)
T ss_pred -----CCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHHhh
Confidence 2357788999999999999999999999998776533
No 7
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.9e-46 Score=382.25 Aligned_cols=257 Identities=21% Similarity=0.281 Sum_probs=209.3
Q ss_pred HhhccccceEEeeeceEEEEEEEec-CCceEEEEEecccCcc-------cHHHHHHHHHHHhcCCCCCcceeeeEEecCC
Q 002278 614 STENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQYPH-------NLREFETELETIGSIRHRNIVSLHGYALSPY 685 (943)
Q Consensus 614 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 685 (943)
..+.|...+.+|+|+||.|-+|..+ +++.||||.+.+.... ....+++|+++|++++|||||+++++|..++
T Consensus 170 ~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~d 249 (475)
T KOG0615|consen 170 FNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPD 249 (475)
T ss_pred hcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCC
Confidence 3456778889999999999999865 6899999998654311 2234679999999999999999999999999
Q ss_pred cceEEEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCC---Cceeeccc
Q 002278 686 GNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDEN---FDAHLSDF 762 (943)
Q Consensus 686 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~---~~~kl~DF 762 (943)
..|+||||+.||+|.+.+- ..+.+.+.....+++|++.|+.|||+. ||+||||||+|||+..+ ..+||+||
T Consensus 250 s~YmVlE~v~GGeLfd~vv---~nk~l~ed~~K~~f~Qll~avkYLH~~---GI~HRDiKPeNILl~~~~e~~llKItDF 323 (475)
T KOG0615|consen 250 SSYMVLEYVEGGELFDKVV---ANKYLREDLGKLLFKQLLTAVKYLHSQ---GIIHRDIKPENILLSNDAEDCLLKITDF 323 (475)
T ss_pred ceEEEEEEecCccHHHHHH---hccccccchhHHHHHHHHHHHHHHHHc---CcccccCCcceEEeccCCcceEEEeccc
Confidence 9999999999999999986 455688888899999999999999999 99999999999999755 78999999
Q ss_pred ccccccCCCCCceeeeEecccceeCccccccCC---CCCcchhhhHHHHHHHHHhCCCCCCCCccHH-HHHHHhcccccc
Q 002278 763 GIARCIPTAMPHASTFVLGTIGYIDPEYAHTSR---LNEKSDVYSFGIVLLEILTGKKAVDNESNLH-QLIMSKADDNTV 838 (943)
Q Consensus 763 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~DvwSlGvil~elltG~~p~~~~~~~~-~~~~~~~~~~~~ 838 (943)
|+|+..+. .......+|||.|.|||++.++. +..++|+||+||+||-+++|.+||.+..... ....+......+
T Consensus 324 GlAK~~g~--~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~y~f 401 (475)
T KOG0615|consen 324 GLAKVSGE--GSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKGRYAF 401 (475)
T ss_pred chhhcccc--ceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcCcccc
Confidence 99998763 34455678999999999998765 3358899999999999999999998554322 222222222233
Q ss_pred ccccCcccccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhc
Q 002278 839 MEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLVSL 887 (943)
Q Consensus 839 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~~ 887 (943)
....|.++ .++..++|.+|+..||++|||+.|+++|-|-.
T Consensus 402 ~p~~w~~I---------seea~dlI~~mL~VdP~~R~s~~eaL~hpW~~ 441 (475)
T KOG0615|consen 402 GPLQWDRI---------SEEALDLINWMLVVDPENRPSADEALNHPWFK 441 (475)
T ss_pred cChhhhhh---------hHHHHHHHHHhhEeCcccCcCHHHHhcChhhh
Confidence 33333333 35667899999999999999999999998753
No 8
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=4.2e-45 Score=376.56 Aligned_cols=252 Identities=25% Similarity=0.377 Sum_probs=206.5
Q ss_pred HhhccccceEEeeeceEEEEEEEec-CCceEEEEEeccc--CcccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEE
Q 002278 614 STENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQ--YPHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLF 690 (943)
Q Consensus 614 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 690 (943)
...+|...+.||+|+||+||+|+++ ++..||||.+.+. ..+..+.+..|+.+|+.++|||||.+++++..++..++|
T Consensus 8 ~~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lV 87 (429)
T KOG0595|consen 8 VVGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLV 87 (429)
T ss_pred ccccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEE
Confidence 3467888888999999999999987 5789999999766 455667788999999999999999999999999999999
Q ss_pred EEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCC------Cceeeccccc
Q 002278 691 YDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDEN------FDAHLSDFGI 764 (943)
Q Consensus 691 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~------~~~kl~DFGl 764 (943)
||||.||+|.++++ ..+.+++.++..++.|+|.|+++||++ +||||||||+|||++.. -.+||+|||+
T Consensus 88 MEyC~gGDLs~yi~---~~~~l~e~t~r~Fm~QLA~alq~L~~~---~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGf 161 (429)
T KOG0595|consen 88 MEYCNGGDLSDYIR---RRGRLPEATARHFMQQLASALQFLHEN---NIIHRDLKPQNILLSTTARNDTSPVLKIADFGF 161 (429)
T ss_pred EEeCCCCCHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCcceEEeccCCCCCCCceEEecccch
Confidence 99999999999998 456899999999999999999999999 99999999999999754 5689999999
Q ss_pred ccccCCCCCceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCc
Q 002278 765 ARCIPTAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDP 844 (943)
Q Consensus 765 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 844 (943)
|+.+.... .....+|++-|||||++....|+.|+|+||+|+++|++++|+.||+.....+-..++......+ .....
T Consensus 162 AR~L~~~~--~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~~~~~-~~~~~ 238 (429)
T KOG0595|consen 162 ARFLQPGS--MAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKKGNEIV-PVLPA 238 (429)
T ss_pred hhhCCchh--HHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhcccccc-Cchhh
Confidence 99987542 2345789999999999999999999999999999999999999999877666555443332221 11111
Q ss_pred ccccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002278 845 EVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARV 883 (943)
Q Consensus 845 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~ 883 (943)
... ....+++...++.+|.+|-++.+...+
T Consensus 239 ~~s---------~~~~~Ll~~ll~~~~~~~~~~~~~~~~ 268 (429)
T KOG0595|consen 239 ELS---------NPLRELLISLLQRNPKDRISFEDFFDH 268 (429)
T ss_pred hcc---------CchhhhhhHHHhcCccccCchHHhhhh
Confidence 111 122355666667777777766665544
No 9
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=100.00 E-value=3.8e-49 Score=402.00 Aligned_cols=474 Identities=29% Similarity=0.413 Sum_probs=349.7
Q ss_pred EEEEEcCCCCCccccCCCcCCCCCCCEEEeeCCcccccCCCCccCCCCCcEEeccCCCcCCccchhccccccceEEEecC
Q 002278 40 VVSLNLSSLNLGGEISPSIGDLRNLQSIDFQGNKLTGQIPDEIGNCGSLVHIELSDNSLYGDIPFSISKLKQLEFLNLKN 119 (943)
Q Consensus 40 v~~L~l~~~~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 119 (943)
...++|++|.+. .+.+.+.++..|+.|++++|+++ .+|.+++.+..++.|+.++|+++ .+|++++.+.+|..|+.++
T Consensus 47 l~~lils~N~l~-~l~~dl~nL~~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~ls-~lp~~i~s~~~l~~l~~s~ 123 (565)
T KOG0472|consen 47 LQKLILSHNDLE-VLREDLKNLACLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKLS-ELPEQIGSLISLVKLDCSS 123 (565)
T ss_pred hhhhhhccCchh-hccHhhhcccceeEEEeccchhh-hCCHHHHHHHHHHHhhcccchHh-hccHHHhhhhhhhhhhccc
Confidence 567999999999 78899999999999999999999 88999999999999999999999 8999999999999999999
Q ss_pred cccccCCCcccCCCCCCcEEEEeccccccccchhccccccceeccccCCccCCCCCcccccccccceeeccceecccccC
Q 002278 120 NQLTGPIPSTLTQIPNLKTLDLARNQLTGEIPRLIYWNEVLQYLGLRGNALTGMLSPDMCQLTGLWYFDVRGNNLTGTIP 199 (943)
Q Consensus 120 n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~ 199 (943)
|.+. .+|+.++.+..|..|+..+|+++ ..|..+..+.+|..|++.+|+++..++..+. ++.|++||+.+|.+. ++|
T Consensus 124 n~~~-el~~~i~~~~~l~dl~~~~N~i~-slp~~~~~~~~l~~l~~~~n~l~~l~~~~i~-m~~L~~ld~~~N~L~-tlP 199 (565)
T KOG0472|consen 124 NELK-ELPDSIGRLLDLEDLDATNNQIS-SLPEDMVNLSKLSKLDLEGNKLKALPENHIA-MKRLKHLDCNSNLLE-TLP 199 (565)
T ss_pred ccee-ecCchHHHHhhhhhhhccccccc-cCchHHHHHHHHHHhhccccchhhCCHHHHH-HHHHHhcccchhhhh-cCC
Confidence 9999 78899999999999999999999 7888899999999999999999999887777 999999999999998 788
Q ss_pred CCCcCCCcccEEEeecccccCcCCCCCCcceEeEEEecCccccccCCccccccCCCcEEecCCCCCCCCCCcccCCCCCc
Q 002278 200 DSIGNCTSFEILDISYNQITGEIPYNIGFLQVATLSLQGNKLTGKIPEVIGLMQALAVLDLSENELVGPIPPILGNLSYT 279 (943)
Q Consensus 200 ~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 279 (943)
..++.|.+|+.|+|.+|+|. .+|.+-++..|+.|+++.|.|.....+..+.+.+|.+|||..|++. ..|+.++-+.+|
T Consensus 200 ~~lg~l~~L~~LyL~~Nki~-~lPef~gcs~L~Elh~g~N~i~~lpae~~~~L~~l~vLDLRdNklk-e~Pde~clLrsL 277 (565)
T KOG0472|consen 200 PELGGLESLELLYLRRNKIR-FLPEFPGCSLLKELHVGENQIEMLPAEHLKHLNSLLVLDLRDNKLK-EVPDEICLLRSL 277 (565)
T ss_pred hhhcchhhhHHHHhhhcccc-cCCCCCccHHHHHHHhcccHHHhhHHHHhcccccceeeeccccccc-cCchHHHHhhhh
Confidence 89999999999999999998 7787778888999999999999655555669999999999999999 789999999999
Q ss_pred ceEEecCCCCCCCCCCCcCCCCcCcEEEcccCccccccccccCCccc--ceEEE-------ccccccC--------CcCc
Q 002278 280 GKLYLHGNKLTGPIPPELGNMSKLSYLQLQNNQLVGTIPAELGKLEQ--LFELN-------LADNNLE--------GPIP 342 (943)
Q Consensus 280 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~--L~~L~-------L~~N~l~--------~~~p 342 (943)
++|++++|.|+ ..|..++++ +|+.|.+.+|.+..+-.+.+..-++ |++|. ++...=. ....
T Consensus 278 ~rLDlSNN~is-~Lp~sLgnl-hL~~L~leGNPlrTiRr~ii~~gT~~vLKyLrs~~~~dglS~se~~~e~~~t~~~~~~ 355 (565)
T KOG0472|consen 278 ERLDLSNNDIS-SLPYSLGNL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDGLSQSEGGTETAMTLPSESF 355 (565)
T ss_pred hhhcccCCccc-cCCcccccc-eeeehhhcCCchHHHHHHHHcccHHHHHHHHHHhhccCCCCCCcccccccCCCCCCcc
Confidence 99999999999 578899999 9999999999986322221111110 11110 0000000 0000
Q ss_pred ccccCCCcCcEEEeeCCcccCcccccccccC--ccceeeccCCcCCCCCCCCCCCCCCcc-EEecCCCcCCCccCCCccc
Q 002278 343 HNISSCTALNQFNVHGNRLSGAIPSSFRNLG--SLTYLNLSRNNFKGKVPTELGRIINLD-TLDLSVNNFSGSVPASIGD 419 (943)
Q Consensus 343 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~--~L~~L~L~~N~l~~~~~~~~~~l~~L~-~L~Ls~N~l~~~~~~~~~~ 419 (943)
.....+.+.+.|++++-+++..+.+.|..-. -.+..+++.|++. .+|..+..++.+. .+++++|.++ .+|..+..
T Consensus 356 ~~~~~~i~tkiL~~s~~qlt~VPdEVfea~~~~~Vt~VnfskNqL~-elPk~L~~lkelvT~l~lsnn~is-fv~~~l~~ 433 (565)
T KOG0472|consen 356 PDIYAIITTKILDVSDKQLTLVPDEVFEAAKSEIVTSVNFSKNQLC-ELPKRLVELKELVTDLVLSNNKIS-FVPLELSQ 433 (565)
T ss_pred cchhhhhhhhhhcccccccccCCHHHHHHhhhcceEEEecccchHh-hhhhhhHHHHHHHHHHHhhcCccc-cchHHHHh
Confidence 1122234455566666666533333333222 1555666666665 4555555554443 3444444444 55555566
Q ss_pred ccccceeecccccccccCCccccCCCccceecccCccccccCChhhhcccccceecccCcccCCCCCCcCccccCCcccc
Q 002278 420 LEHLLTLNLSRNHLNGLLPAEFGNLRSIQTIDMSFNQLSGSIPAELGQLQNIISLILNNNNLQGGIPDQLSNCFSLSNLN 499 (943)
Q Consensus 420 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 499 (943)
+++|..|+|++|.+. .+|.+++.+..|++||+|+|++. .+|..+..+..|+.+-.++|++....|+.+.++.+|..||
T Consensus 434 l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~NrFr-~lP~~~y~lq~lEtllas~nqi~~vd~~~l~nm~nL~tLD 511 (565)
T KOG0472|consen 434 LQKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNLSFNRFR-MLPECLYELQTLETLLASNNQIGSVDPSGLKNMRNLTTLD 511 (565)
T ss_pred hhcceeeecccchhh-hcchhhhhhhhhheecccccccc-cchHHHhhHHHHHHHHhccccccccChHHhhhhhhcceec
Confidence 666666666666555 45556666666666666666665 5566655555555555555666544444455666666666
Q ss_pred cCCccccccCCCCcccCcCCCCccccCCC
Q 002278 500 VSYNNLSGIIPPIRNFSRFSSNSFIGNPL 528 (943)
Q Consensus 500 ls~N~l~~~~~~~~~~~~~~~~~~~~Np~ 528 (943)
|.+|.|..+||.++....+..+.+.|||+
T Consensus 512 L~nNdlq~IPp~LgnmtnL~hLeL~gNpf 540 (565)
T KOG0472|consen 512 LQNNDLQQIPPILGNMTNLRHLELDGNPF 540 (565)
T ss_pred cCCCchhhCChhhccccceeEEEecCCcc
Confidence 66666666666555555555555666654
No 10
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-44 Score=386.61 Aligned_cols=260 Identities=28% Similarity=0.403 Sum_probs=220.6
Q ss_pred HhhccccceEEeeeceEEEEEEEecCCceEEEEEecccCcccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEE
Q 002278 614 STENLSEKYIVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDY 693 (943)
Q Consensus 614 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 693 (943)
..+.++..+.||+|.||+||.|.++...+||+|.++.. ....++|.+|+++|++++|++||+++|+|..++..+|||||
T Consensus 204 ~r~~l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~-~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~ 282 (468)
T KOG0197|consen 204 PREELKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEG-SMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEY 282 (468)
T ss_pred cHHHHHHHHHhcCCccceEEEEEEcCCCcccceEEecc-ccChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEe
Confidence 34455667789999999999999998889999999765 34557889999999999999999999999998899999999
Q ss_pred ccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCC
Q 002278 694 MVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMP 773 (943)
Q Consensus 694 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~ 773 (943)
|+.|+|.++|+. .....+...+.+.++.|||+|++||+++ ++|||||.++||||+++..|||+|||+|+...++..
T Consensus 283 m~~GsLl~yLr~-~~~~~l~~~~Ll~~a~qIaeGM~YLes~---~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y 358 (468)
T KOG0197|consen 283 MPKGSLLDYLRT-REGGLLNLPQLLDFAAQIAEGMAYLESK---NYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEY 358 (468)
T ss_pred cccCcHHHHhhh-cCCCccchHHHHHHHHHHHHHHHHHHhC---CccchhhhhhheeeccCceEEEcccccccccCCCce
Confidence 999999999985 2456789999999999999999999999 999999999999999999999999999996665555
Q ss_pred ceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCccHHHHHHHhccccccccccCcccccCccC
Q 002278 774 HASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVD 852 (943)
Q Consensus 774 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 852 (943)
.......-+..|.|||.+....++.|||||||||+||||+| |+.||.+....+........ ..++. +
T Consensus 359 ~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~le~G-yRlp~----------P- 426 (468)
T KOG0197|consen 359 TASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELLERG-YRLPR----------P- 426 (468)
T ss_pred eecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHHhcc-CcCCC----------C-
Confidence 55544445789999999999999999999999999999999 99999887765544333222 22111 1
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcCCC
Q 002278 853 LSAVRKTFQLALLCTKRYPSERPTMQEVARVLVSLLPA 890 (943)
Q Consensus 853 ~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~~~~~ 890 (943)
..++..++++|..||+.+|++|||+..+...++.+...
T Consensus 427 ~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~~ 464 (468)
T KOG0197|consen 427 EGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFFTS 464 (468)
T ss_pred CCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhhc
Confidence 12346788999999999999999999999988876653
No 11
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=5.4e-44 Score=365.94 Aligned_cols=251 Identities=25% Similarity=0.312 Sum_probs=210.1
Q ss_pred HhhccccceEEeeeceEEEEEEEecC-CceEEEEEecccC---cccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceE
Q 002278 614 STENLSEKYIVGYGASSTVYKCALKN-SRPIAVKKLYNQY---PHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLL 689 (943)
Q Consensus 614 ~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 689 (943)
..+.|+..++||+|+||.||.++.++ ++.+|+|++.+.. ....+...+|..+++.++||.||+++-.|++.+..|+
T Consensus 23 ~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLyl 102 (357)
T KOG0598|consen 23 GPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYL 102 (357)
T ss_pred ChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEE
Confidence 35678999999999999999999774 6788999987654 2345678899999999999999999999999999999
Q ss_pred EEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccC
Q 002278 690 FYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIP 769 (943)
Q Consensus 690 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~ 769 (943)
|+||+.||.|..+|+ +.+.+++..+.-++..|+.||.|||++ +||||||||+|||+|++|+++|+|||+++...
T Consensus 103 Vld~~~GGeLf~hL~---~eg~F~E~~arfYlaEi~lAL~~LH~~---gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~ 176 (357)
T KOG0598|consen 103 VLDYLNGGELFYHLQ---REGRFSEDRARFYLAEIVLALGYLHSK---GIIYRDLKPENILLDEQGHIKLTDFGLCKEDL 176 (357)
T ss_pred EEeccCCccHHHHHH---hcCCcchhHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHeeecCCCcEEEeccccchhcc
Confidence 999999999999997 567899999999999999999999999 99999999999999999999999999998654
Q ss_pred CCCCceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccccC
Q 002278 770 TAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVT 849 (943)
Q Consensus 770 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 849 (943)
... ..+...+||+.|||||++.+.+|+.++|+||+|+++|||++|.+||.+.+.......+........... +
T Consensus 177 ~~~-~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k~~~~p~~---l--- 249 (357)
T KOG0598|consen 177 KDG-DATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGKLPLPPGY---L--- 249 (357)
T ss_pred cCC-CccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCcCCCCCcc---C---
Confidence 332 233447899999999999999999999999999999999999999998775554444433331111110 1
Q ss_pred ccCHHHHHHHHHHHHHccCCCCCCCC----CHHHHHHH
Q 002278 850 CVDLSAVRKTFQLALLCTKRYPSERP----TMQEVARV 883 (943)
Q Consensus 850 ~~~~~~~~~l~~l~~~cl~~dP~~RP----t~~el~~~ 883 (943)
.....++++..++.||++|- ++.++.+|
T Consensus 250 ------s~~ardll~~LL~rdp~~RLg~~~d~~~ik~H 281 (357)
T KOG0598|consen 250 ------SEEARDLLKKLLKRDPRQRLGGPGDAEEIKRH 281 (357)
T ss_pred ------CHHHHHHHHHHhccCHHHhcCCCCChHHhhcC
Confidence 13456889999999999994 56666554
No 12
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.4e-45 Score=359.94 Aligned_cols=259 Identities=24% Similarity=0.324 Sum_probs=209.6
Q ss_pred hhccccceEEeeeceEEEEEEEe-cCCceEEEEEecc--cCcccHHHHHHHHHHHhcCCCCCcceeee-EEecCCc-ceE
Q 002278 615 TENLSEKYIVGYGASSTVYKCAL-KNSRPIAVKKLYN--QYPHNLREFETELETIGSIRHRNIVSLHG-YALSPYG-NLL 689 (943)
Q Consensus 615 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~~-~~~~~~~-~~l 689 (943)
...|++.++||+|+||+||++.. .+|..||.|++.= ......+....|+.+|++++|||||++++ .+.++.+ .+|
T Consensus 18 l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlni 97 (375)
T KOG0591|consen 18 LADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNI 97 (375)
T ss_pred HHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHH
Confidence 45678888999999999999985 4789999999852 22344567889999999999999999999 4555555 799
Q ss_pred EEEEccCCChhhhccCCC-CCccCCHHHHHHHHHHHHHHHHHhhhCCCCC--eEecCCCCccEEECCCCceeeccccccc
Q 002278 690 FYDYMVNGSLWDLLHGPS-KKVKLDWETRLKIAVGAAQGLAYLHHDCNPR--IIHRDVKSSNILIDENFDAHLSDFGIAR 766 (943)
Q Consensus 690 v~e~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~--ivH~Dlkp~Nill~~~~~~kl~DFGla~ 766 (943)
|||||..|+|...++..+ .+..+++.++++++.|++.||.++|++ -++ |+||||||.||+++++|.||++|||+++
T Consensus 98 vmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~-~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r 176 (375)
T KOG0591|consen 98 VMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSK-IPRGTVMHRDIKPANIFLTANGVVKLGDFGLGR 176 (375)
T ss_pred HHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhcc-ccccceeeccCcchheEEcCCCceeeccchhHh
Confidence 999999999999986433 345799999999999999999999994 225 8999999999999999999999999999
Q ss_pred ccCCCCCceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCccc
Q 002278 767 CIPTAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEV 846 (943)
Q Consensus 767 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 846 (943)
.+........+ .+|||.||+||.+.+.+|+.||||||+||++|||+.-++||.++. +..+........ . |.+
T Consensus 177 ~l~s~~tfA~S-~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n-~~~L~~KI~qgd-~-----~~~ 248 (375)
T KOG0591|consen 177 FLSSKTTFAHS-LVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDN-LLSLCKKIEQGD-Y-----PPL 248 (375)
T ss_pred HhcchhHHHHh-hcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCccccc-HHHHHHHHHcCC-C-----CCC
Confidence 98776554444 569999999999999999999999999999999999999999884 444444333221 1 111
Q ss_pred ccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhh
Q 002278 847 SVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLVS 886 (943)
Q Consensus 847 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~ 886 (943)
++.-....+..++..|+..||+.||+...++..+..
T Consensus 249 ----p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~~ 284 (375)
T KOG0591|consen 249 ----PDEHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQS 284 (375)
T ss_pred ----cHHHhhhHHHHHHHHHccCCcccCCCcchHHHHHHH
Confidence 122334678889999999999999986555555544
No 13
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=3.7e-44 Score=353.54 Aligned_cols=261 Identities=23% Similarity=0.289 Sum_probs=213.4
Q ss_pred hccccceEEeeeceEEEEEEEecC-CceEEEEEecccCc--ccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEE
Q 002278 616 ENLSEKYIVGYGASSTVYKCALKN-SRPIAVKKLYNQYP--HNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYD 692 (943)
Q Consensus 616 ~~~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 692 (943)
+.|+...++|+|+||+||+|++++ |+.||||++..... ...+-..+|++++++++|||+|.++.+|......++|+|
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE 81 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFE 81 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEee
Confidence 568888999999999999999885 78999999976543 233446799999999999999999999999999999999
Q ss_pred EccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCC
Q 002278 693 YMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAM 772 (943)
Q Consensus 693 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~ 772 (943)
||+..-|.+ ++. ....++.+.+.+++.|++.|+.|+|++ +++||||||+|||++.+|.+||||||+|+.+.. .
T Consensus 82 ~~dhTvL~e-Le~--~p~G~~~~~vk~~l~Q~l~ai~~cHk~---n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~-p 154 (396)
T KOG0593|consen 82 YCDHTVLHE-LER--YPNGVPSELVKKYLYQLLKAIHFCHKN---NCIHRDIKPENILITQNGVVKLCDFGFARTLSA-P 154 (396)
T ss_pred ecchHHHHH-HHh--ccCCCCHHHHHHHHHHHHHHhhhhhhc---CeecccCChhheEEecCCcEEeccchhhHhhcC-C
Confidence 997655544 432 344588999999999999999999999 999999999999999999999999999998864 2
Q ss_pred CceeeeEecccceeCcccccc-CCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccc----------
Q 002278 773 PHASTFVLGTIGYIDPEYAHT-SRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEA---------- 841 (943)
Q Consensus 773 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~---------- 841 (943)
....+.++.|.+|+|||.+.+ ..|+..+||||+||++.||++|.+.|.+.++.+++..+...-+.+...
T Consensus 155 gd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~ 234 (396)
T KOG0593|consen 155 GDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPF 234 (396)
T ss_pred cchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCc
Confidence 344556779999999999887 689999999999999999999999999999999988776654443221
Q ss_pred ----cCcccccCccC----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002278 842 ----VDPEVSVTCVD----LSAVRKTFQLALLCTKRYPSERPTMQEVARV 883 (943)
Q Consensus 842 ----~~~~~~~~~~~----~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~ 883 (943)
.-|+.....+- ......+.++++.|++.||++|++-++++.|
T Consensus 235 F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H 284 (396)
T KOG0593|consen 235 FHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHH 284 (396)
T ss_pred eeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhcC
Confidence 01111100000 0122356799999999999999999998865
No 14
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=9e-43 Score=370.14 Aligned_cols=254 Identities=26% Similarity=0.355 Sum_probs=222.1
Q ss_pred HHHhhccccceEEeeeceEEEEEEEec-CCceEEEEEecccC---cccHHHHHHHHHHHhcC-CCCCcceeeeEEecCCc
Q 002278 612 MRSTENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQY---PHNLREFETELETIGSI-RHRNIVSLHGYALSPYG 686 (943)
Q Consensus 612 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 686 (943)
++...+|..++.||+|+|++||+|+.+ .++.||||++.+.. ....+.+..|-.+|.+| .||.|++++..|+++..
T Consensus 69 kk~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~s 148 (604)
T KOG0592|consen 69 KKTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEES 148 (604)
T ss_pred cCChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccc
Confidence 455678889999999999999999976 57899999986543 23345567888999999 79999999999999999
Q ss_pred ceEEEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeeccccccc
Q 002278 687 NLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIAR 766 (943)
Q Consensus 687 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~ 766 (943)
.|+|+||+++|+|.++|+ ..+.+++.....++.+|+.||+|||++ |||||||||+|||+|+||++||+|||.|+
T Consensus 149 LYFvLe~A~nGdll~~i~---K~Gsfde~caR~YAAeIldAleylH~~---GIIHRDlKPENILLd~dmhikITDFGsAK 222 (604)
T KOG0592|consen 149 LYFVLEYAPNGDLLDLIK---KYGSFDETCARFYAAEILDALEYLHSN---GIIHRDLKPENILLDKDGHIKITDFGSAK 222 (604)
T ss_pred eEEEEEecCCCcHHHHHH---HhCcchHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeEcCCCcEEEeeccccc
Confidence 999999999999999998 567899999999999999999999999 99999999999999999999999999999
Q ss_pred ccCCCCCc---------e---eeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhcc
Q 002278 767 CIPTAMPH---------A---STFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKAD 834 (943)
Q Consensus 767 ~~~~~~~~---------~---~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~ 834 (943)
.+...... . ....+||..|.+||++.+...++.+|+|+|||++|+|+.|++||.+.+++..+.++...
T Consensus 223 ~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI~~l 302 (604)
T KOG0592|consen 223 ILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQKIQAL 302 (604)
T ss_pred cCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHHHHHHHHHh
Confidence 87432111 1 13467999999999999999999999999999999999999999999988888888777
Q ss_pred ccccccccCcccccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 002278 835 DNTVMEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVL 884 (943)
Q Consensus 835 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L 884 (943)
+..+++.+++ ...+++++.+..||.+|+|.+++.+|.
T Consensus 303 ~y~fp~~fp~-------------~a~dLv~KLLv~dp~~Rlt~~qIk~Hp 339 (604)
T KOG0592|consen 303 DYEFPEGFPE-------------DARDLIKKLLVRDPSDRLTSQQIKAHP 339 (604)
T ss_pred cccCCCCCCH-------------HHHHHHHHHHccCccccccHHHHhhCc
Confidence 7776666553 345899999999999999999998875
No 15
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2e-42 Score=364.53 Aligned_cols=264 Identities=24% Similarity=0.270 Sum_probs=224.3
Q ss_pred HhhccccceEEeeeceEEEEEEEec-CCceEEEEEecccC--cccHHHHHHHHHHHhcCCCCCcceeeeEEecC--Ccce
Q 002278 614 STENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQY--PHNLREFETELETIGSIRHRNIVSLHGYALSP--YGNL 688 (943)
Q Consensus 614 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~ 688 (943)
..+.|+.+.+||+|.||.||+|++. +|+.||+|++.-.. +.......+||.+|+++.||||+++.+...+. ...|
T Consensus 115 ~~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siY 194 (560)
T KOG0600|consen 115 RADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIY 194 (560)
T ss_pred chHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEE
Confidence 3456778888999999999999965 68899999996543 55567788999999999999999999998876 6799
Q ss_pred EEEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeeccccccccc
Q 002278 689 LFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCI 768 (943)
Q Consensus 689 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~ 768 (943)
+|+|||+. +|..++.. ....+++.++..++.|++.||+|+|++ +|+|||||.+|||+|.+|.+||+|||+|+++
T Consensus 195 lVFeYMdh-DL~GLl~~--p~vkft~~qIKc~mkQLl~Gl~~cH~~---gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y 268 (560)
T KOG0600|consen 195 LVFEYMDH-DLSGLLSS--PGVKFTEPQIKCYMKQLLEGLEYCHSR---GVLHRDIKGSNILIDNNGVLKIADFGLARFY 268 (560)
T ss_pred EEEecccc-hhhhhhcC--CCcccChHHHHHHHHHHHHHHHHHhhc---CeeeccccccceEEcCCCCEEeccccceeec
Confidence 99999965 78777763 345799999999999999999999999 9999999999999999999999999999998
Q ss_pred CCCCCceeeeEecccceeCccccccC-CCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccc
Q 002278 769 PTAMPHASTFVLGTIGYIDPEYAHTS-RLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVS 847 (943)
Q Consensus 769 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 847 (943)
........+..+-|.+|+|||++.|. .|+.++|+||.|||+.||++|++.|.+...++++..+....+...+..|+...
T Consensus 269 ~~~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~k 348 (560)
T KOG0600|consen 269 TPSGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSK 348 (560)
T ss_pred cCCCCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhcccccc
Confidence 77766656667789999999998874 69999999999999999999999999999999999888887777777776221
Q ss_pred cCc-------c----CH-----HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002278 848 VTC-------V----DL-----SAVRKTFQLALLCTKRYPSERPTMQEVARV 883 (943)
Q Consensus 848 ~~~-------~----~~-----~~~~~l~~l~~~cl~~dP~~RPt~~el~~~ 883 (943)
... . .. .......+++..+|..||.+|.||.+++++
T Consensus 349 LP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~s 400 (560)
T KOG0600|consen 349 LPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQS 400 (560)
T ss_pred CCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcC
Confidence 110 0 00 112355689999999999999999999876
No 16
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5e-43 Score=366.33 Aligned_cols=264 Identities=21% Similarity=0.245 Sum_probs=222.6
Q ss_pred HhhccccceEEeeeceEEEEEEEec-CCceEEEEEecccCcccHHH-HHHHHHHHhcCC-CCCcceeeeEEecCC-cceE
Q 002278 614 STENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQYPHNLRE-FETELETIGSIR-HRNIVSLHGYALSPY-GNLL 689 (943)
Q Consensus 614 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~-~~~E~~~l~~l~-h~niv~l~~~~~~~~-~~~l 689 (943)
..++|...+.||.|.||.||+|+.+ .+..||||++++......+. -.+|+..|+++. |||||++.+++.+.+ ..++
T Consensus 8 ~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~f 87 (538)
T KOG0661|consen 8 FMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYF 87 (538)
T ss_pred HHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEee
Confidence 4578999999999999999999965 57889999998765443333 358999999998 999999999999988 8999
Q ss_pred EEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccC
Q 002278 690 FYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIP 769 (943)
Q Consensus 690 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~ 769 (943)
||||| ..+|+++++++ ...+++.++..|+.||++||+|+|.+ |+.|||+||+|||+.....+||+|||+||...
T Consensus 88 VfE~M-d~NLYqLmK~R--~r~fse~~irnim~QilqGL~hiHk~---GfFHRDlKPENiLi~~~~~iKiaDFGLARev~ 161 (538)
T KOG0661|consen 88 VFEFM-DCNLYQLMKDR--NRLFSESDIRNIMYQILQGLAHIHKH---GFFHRDLKPENILISGNDVIKIADFGLAREVR 161 (538)
T ss_pred eHHhh-hhhHHHHHhhc--CCcCCHHHHHHHHHHHHHHHHHHHhc---CcccccCChhheEecccceeEecccccccccc
Confidence 99999 56999999864 56799999999999999999999999 99999999999999988899999999999886
Q ss_pred CCCCceeeeEecccceeCcccccc-CCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCccc--
Q 002278 770 TAMPHASTFVLGTIGYIDPEYAHT-SRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEV-- 846 (943)
Q Consensus 770 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 846 (943)
...+. +.++.|.+|+|||++.+ +.|+.+.||||+|||++|+.+-++.|.+.++.+++.++...-+...+.-+++-
T Consensus 162 SkpPY--TeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~ 239 (538)
T KOG0661|consen 162 SKPPY--TEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYN 239 (538)
T ss_pred cCCCc--chhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHH
Confidence 65443 44678999999998765 67999999999999999999999999999999999888876665544433330
Q ss_pred ------------ccC---ccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 002278 847 ------------SVT---CVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLV 885 (943)
Q Consensus 847 ------------~~~---~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~ 885 (943)
... ..-.....+..+++.+|+.+||++||||++++++-.
T Consensus 240 La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~pf 293 (538)
T KOG0661|consen 240 LASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQHPF 293 (538)
T ss_pred HHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcCcc
Confidence 000 000124467789999999999999999999999864
No 17
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=1.6e-41 Score=329.84 Aligned_cols=263 Identities=22% Similarity=0.258 Sum_probs=224.1
Q ss_pred hccccceEEeeeceEEEEEEEec-CCceEEEEEecccCcc--cHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEE
Q 002278 616 ENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQYPH--NLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYD 692 (943)
Q Consensus 616 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 692 (943)
.+|...+++|+|.||.||+|++. .++.||||+++..... -.....+|+..++.++|+||+.++++|...+...+|+|
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfE 81 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFE 81 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEE
Confidence 46788889999999999999965 6899999999755322 24567899999999999999999999999999999999
Q ss_pred EccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCC
Q 002278 693 YMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAM 772 (943)
Q Consensus 693 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~ 772 (943)
|++ .+|+..++. ....++..++..++.++.+|++|+|++ .|+||||||.|+|++++|.+||+|||+|+.+....
T Consensus 82 fm~-tdLe~vIkd--~~i~l~pa~iK~y~~m~LkGl~y~H~~---~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~ 155 (318)
T KOG0659|consen 82 FMP-TDLEVVIKD--KNIILSPADIKSYMLMTLKGLAYCHSK---WILHRDLKPNNLLISSDGQLKIADFGLARFFGSPN 155 (318)
T ss_pred ecc-ccHHHHhcc--cccccCHHHHHHHHHHHHHHHHHHHhh---hhhcccCCccceEEcCCCcEEeecccchhccCCCC
Confidence 995 589888874 456799999999999999999999999 99999999999999999999999999999987654
Q ss_pred CceeeeEecccceeCccccccC-CCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccccCc-
Q 002278 773 PHASTFVLGTIGYIDPEYAHTS-RLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTC- 850 (943)
Q Consensus 773 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 850 (943)
..... .+-|.+|+|||.+.|. .|+..+||||.|||+.||+-|.+-|.+.++++++..+...-+...+..+|++....
T Consensus 156 ~~~~~-~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpd 234 (318)
T KOG0659|consen 156 RIQTH-QVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPD 234 (318)
T ss_pred ccccc-ceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCcccccccc
Confidence 43333 3579999999988874 69999999999999999999999999999999999988877777777776653111
Q ss_pred --------------cCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 002278 851 --------------VDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLV 885 (943)
Q Consensus 851 --------------~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~ 885 (943)
.-..+.....+++..++..+|.+|.|++|++++-.
T Consensus 235 Y~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~y 283 (318)
T KOG0659|consen 235 YVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKHPY 283 (318)
T ss_pred HHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcchh
Confidence 00123345689999999999999999999998743
No 18
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=1e-43 Score=377.51 Aligned_cols=390 Identities=22% Similarity=0.236 Sum_probs=285.8
Q ss_pred EEEEEcCCCCCccccCCCcCCC--CCCCEEEeeCCcccccCCCCccCCCCCcEEeccCCCcCCccchhccccccceEEEe
Q 002278 40 VVSLNLSSLNLGGEISPSIGDL--RNLQSIDFQGNKLTGQIPDEIGNCGSLVHIELSDNSLYGDIPFSISKLKQLEFLNL 117 (943)
Q Consensus 40 v~~L~l~~~~~~~~~~~~l~~l--~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 117 (943)
-..||.+++.+...--..+.++ ...+.|||++|+|...-+..|.++++|+.++|.+|.++ .+|.-.+...+|+.|+|
T Consensus 54 ~~lldcs~~~lea~~~~~l~g~lp~~t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sghl~~L~L 132 (873)
T KOG4194|consen 54 TRLLDCSDRELEAIDKSRLKGFLPSQTQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHESGHLEKLDL 132 (873)
T ss_pred ceeeecCccccccccccccCCcCccceeeeeccccccccCcHHHHhcCCcceeeeeccchhh-hcccccccccceeEEee
Confidence 3467888877763222223332 23567999999998777778889999999999999998 78876667778999999
Q ss_pred cCcccccCCCcccCCCCCCcEEEEeccccccccchhccccccceeccccCCccCCCCCcccccccccceeeccceecccc
Q 002278 118 KNNQLTGPIPSTLTQIPNLKTLDLARNQLTGEIPRLIYWNEVLQYLGLRGNALTGMLSPDMCQLTGLWYFDVRGNNLTGT 197 (943)
Q Consensus 118 s~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~ 197 (943)
.+|.|+.+-.+.++.++.|+.||||.|.|+...-..|-.-.++++|+|++|+|+.+..+.|.++.+|..|.|+.|+|+..
T Consensus 133 ~~N~I~sv~se~L~~l~alrslDLSrN~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittL 212 (873)
T KOG4194|consen 133 RHNLISSVTSEELSALPALRSLDLSRNLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTL 212 (873)
T ss_pred eccccccccHHHHHhHhhhhhhhhhhchhhcccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCccccc
Confidence 99999988888899999999999999999866666677777899999999999999888999999999999999999977
Q ss_pred cCCCCcCCCcccEEEeecccccCcCCCCCCcceEeEEEecCccccccCCccccccCCCcEEecCCCCCCCCCCcccCCCC
Q 002278 198 IPDSIGNCTSFEILDISYNQITGEIPYNIGFLQVATLSLQGNKLTGKIPEVIGLMQALAVLDLSENELVGPIPPILGNLS 277 (943)
Q Consensus 198 ~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 277 (943)
.+..|.++++|+.|+|..|+|.-. ---.|..+.+|+.|.|..|.|...-...|-.+.
T Consensus 213 p~r~Fk~L~~L~~LdLnrN~iriv-----------------------e~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~ 269 (873)
T KOG4194|consen 213 PQRSFKRLPKLESLDLNRNRIRIV-----------------------EGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLE 269 (873)
T ss_pred CHHHhhhcchhhhhhccccceeee-----------------------hhhhhcCchhhhhhhhhhcCcccccCcceeeec
Confidence 778888899999999999988621 112345555666666666666655555566666
Q ss_pred CcceEEecCCCCCCCCCCCcCCCCcCcEEEcccCccccccccccCCcccceEEEccccccCCcCcccccCCCcCcEEEee
Q 002278 278 YTGKLYLHGNKLTGPIPPELGNMSKLSYLQLQNNQLVGTIPAELGKLEQLFELNLADNNLEGPIPHNISSCTALNQFNVH 357 (943)
Q Consensus 278 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 357 (943)
++++|+|+.|+++.....++.++++|+.|+|++|.|..+.++.+...++|++|+|++|+|+...++.|..+..|++|+|+
T Consensus 270 kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs 349 (873)
T KOG4194|consen 270 KMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLS 349 (873)
T ss_pred ccceeecccchhhhhhcccccccchhhhhccchhhhheeecchhhhcccceeEeccccccccCChhHHHHHHHhhhhccc
Confidence 66666666666665555566666666666666666666666666666666666666666666666666666666666666
Q ss_pred CCcccCcccccccccCccceeeccCCcCCCCCC---CCCCCCCCccEEecCCCcCCCccCCCcccccccceeeccccccc
Q 002278 358 GNRLSGAIPSSFRNLGSLTYLNLSRNNFKGKVP---TELGRIINLDTLDLSVNNFSGSVPASIGDLEHLLTLNLSRNHLN 434 (943)
Q Consensus 358 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~---~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 434 (943)
+|.|+.+-..+|..+.+|+.|||++|.++..+. ..|.+++.|+.|+|.+|+|..+...+|.+++.|++|||.+|.|.
T Consensus 350 ~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l~gNqlk~I~krAfsgl~~LE~LdL~~Naia 429 (873)
T KOG4194|consen 350 HNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKLRLTGNQLKSIPKRAFSGLEALEHLDLGDNAIA 429 (873)
T ss_pred ccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhhheeecCceeeecchhhhccCcccceecCCCCcce
Confidence 666666666667777777777777776654432 34666777777777777777555566777777888888888877
Q ss_pred ccCCccccCCCccceecccC
Q 002278 435 GLLPAEFGNLRSIQTIDMSF 454 (943)
Q Consensus 435 ~~~p~~~~~l~~L~~L~Ls~ 454 (943)
++-|..|..+ .|++|.+..
T Consensus 430 SIq~nAFe~m-~Lk~Lv~nS 448 (873)
T KOG4194|consen 430 SIQPNAFEPM-ELKELVMNS 448 (873)
T ss_pred eecccccccc-hhhhhhhcc
Confidence 7777777777 777776543
No 19
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=8e-42 Score=358.32 Aligned_cols=258 Identities=29% Similarity=0.413 Sum_probs=206.7
Q ss_pred hccccceEEeeeceEEEEEEEecC-CceEEEEEecccCcccHHHHHHHHHHHhcCCCCCcceeeeEEecCC--cceEEEE
Q 002278 616 ENLSEKYIVGYGASSTVYKCALKN-SRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYALSPY--GNLLFYD 692 (943)
Q Consensus 616 ~~~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~lv~e 692 (943)
.++...+.||+|+||+||++...+ |...|||.+........+.+.+|+++|++++|||||+++|...... ..+++||
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mE 96 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFME 96 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeee
Confidence 457778889999999999999764 8899999986553333677999999999999999999999855444 5889999
Q ss_pred EccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECC-CCceeecccccccccCC-
Q 002278 693 YMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDE-NFDAHLSDFGIARCIPT- 770 (943)
Q Consensus 693 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~-~~~~kl~DFGla~~~~~- 770 (943)
|+++|+|.+++.... +.+++..+..++.||++||+|||++ |||||||||+|||++. ++.+||+|||+++....
T Consensus 97 y~~~GsL~~~~~~~g--~~l~E~~v~~ytr~iL~GL~ylHs~---g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~ 171 (313)
T KOG0198|consen 97 YAPGGSLSDLIKRYG--GKLPEPLVRRYTRQILEGLAYLHSK---GIVHCDIKPANILLDPSNGDVKLADFGLAKKLESK 171 (313)
T ss_pred ccCCCcHHHHHHHcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCcccceEEEeCCCCeEEeccCccccccccc
Confidence 999999999997432 2799999999999999999999999 9999999999999999 79999999999987763
Q ss_pred -CCCceeeeEecccceeCccccccC-CCCCcchhhhHHHHHHHHHhCCCCCCCC-ccHHHHHHHhccccccccccCcccc
Q 002278 771 -AMPHASTFVLGTIGYIDPEYAHTS-RLNEKSDVYSFGIVLLEILTGKKAVDNE-SNLHQLIMSKADDNTVMEAVDPEVS 847 (943)
Q Consensus 771 -~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvil~elltG~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 847 (943)
..........||+.|||||++..+ ....++||||+||++.||+||++||... ........+.... ..+ .++..++
T Consensus 172 ~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ig~~~-~~P-~ip~~ls 249 (313)
T KOG0198|consen 172 GTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLLIGRED-SLP-EIPDSLS 249 (313)
T ss_pred cccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHHHhccC-CCC-CCCcccC
Confidence 222233456799999999999953 3445999999999999999999999873 3333333332222 111 2222222
Q ss_pred cCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcCC
Q 002278 848 VTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLVSLLP 889 (943)
Q Consensus 848 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~~~~ 889 (943)
....+++..|+..||++||||.++++|......
T Consensus 250 ---------~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~~ 282 (313)
T KOG0198|consen 250 ---------DEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQN 282 (313)
T ss_pred ---------HHHHHHHHHHhhcCcccCcCHHHHhhChhhhcc
Confidence 355689999999999999999999999765443
No 20
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=3.8e-43 Score=373.22 Aligned_cols=389 Identities=22% Similarity=0.255 Sum_probs=298.7
Q ss_pred CEEEeeCCcccccCCCCccC-C-CCCcEEeccCCCcCCccchhccccccceEEEecCcccccCCCcccCCCCCCcEEEEe
Q 002278 65 QSIDFQGNKLTGQIPDEIGN-C-GSLVHIELSDNSLYGDIPFSISKLKQLEFLNLKNNQLTGPIPSTLTQIPNLKTLDLA 142 (943)
Q Consensus 65 ~~L~Ls~n~l~~~~p~~~~~-l-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls 142 (943)
.-||.++++|...--..+.+ + +.-+.||||+|++...-+..|.++++|+.++|..|.++ .+|.......+|+.|+|.
T Consensus 55 ~lldcs~~~lea~~~~~l~g~lp~~t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sghl~~L~L~ 133 (873)
T KOG4194|consen 55 RLLDCSDRELEAIDKSRLKGFLPSQTQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHESGHLEKLDLR 133 (873)
T ss_pred eeeecCccccccccccccCCcCccceeeeeccccccccCcHHHHhcCCcceeeeeccchhh-hcccccccccceeEEeee
Confidence 46788888887321122222 1 23456777777777666667777777777777777777 566665556667777777
Q ss_pred ccccccccchhccccccceeccccCCccCCCCCcccccccccceeeccceecccccCCCCcCCCcccEEEeecccccCcC
Q 002278 143 RNQLTGEIPRLIYWNEVLQYLGLRGNALTGMLSPDMCQLTGLWYFDVRGNNLTGTIPDSIGNCTSFEILDISYNQITGEI 222 (943)
Q Consensus 143 ~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~l~~l~~L~~L~Ls~N~l~~~~ 222 (943)
+|.|++.-...+..++.|+.|+|+.|.|+.+....|..-.++++|+|++|+|+..-...|..+.+|.+|.|++|+|+
T Consensus 134 ~N~I~sv~se~L~~l~alrslDLSrN~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrit--- 210 (873)
T KOG4194|consen 134 HNLISSVTSEELSALPALRSLDLSRNLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRIT--- 210 (873)
T ss_pred ccccccccHHHHHhHhhhhhhhhhhchhhcccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCccc---
Confidence 77777666666667777777777777777776666666666666666666666555566666666666666666665
Q ss_pred CCCCCcceEeEEEecCccccccCCccccccCCCcEEecCCCCCCCCCCcccCCCCCcceEEecCCCCCCCCCCCcCCCCc
Q 002278 223 PYNIGFLQVATLSLQGNKLTGKIPEVIGLMQALAVLDLSENELVGPIPPILGNLSYTGKLYLHGNKLTGPIPPELGNMSK 302 (943)
Q Consensus 223 ~~~~~~~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~ 302 (943)
...+..|+++++|+.|||..|+|.-..--.|.+|.+|+.|.|..|+|...-...|..|.+
T Consensus 211 --------------------tLp~r~Fk~L~~L~~LdLnrN~irive~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~k 270 (873)
T KOG4194|consen 211 --------------------TLPQRSFKRLPKLESLDLNRNRIRIVEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEK 270 (873)
T ss_pred --------------------ccCHHHhhhcchhhhhhccccceeeehhhhhcCchhhhhhhhhhcCcccccCcceeeecc
Confidence 345567888999999999999888444567888999999999999998877788888999
Q ss_pred CcEEEcccCccccccccccCCcccceEEEccccccCCcCcccccCCCcCcEEEeeCCcccCcccccccccCccceeeccC
Q 002278 303 LSYLQLQNNQLVGTIPAELGKLEQLFELNLADNNLEGPIPHNISSCTALNQFNVHGNRLSGAIPSSFRNLGSLTYLNLSR 382 (943)
Q Consensus 303 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 382 (943)
+++|+|+.|++...-.+++.+|+.|+.|+|++|.|..+-++....+++|+.|+|++|+|+...+.+|..|..|++|+|++
T Consensus 271 me~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~ 350 (873)
T KOG4194|consen 271 MEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSH 350 (873)
T ss_pred cceeecccchhhhhhcccccccchhhhhccchhhhheeecchhhhcccceeEeccccccccCChhHHHHHHHhhhhcccc
Confidence 99999999999878888888899999999999999888888888888999999999999888888888888899999999
Q ss_pred CcCCCCCCCCCCCCCCccEEecCCCcCCCccCC---CcccccccceeecccccccccCCccccCCCccceecccCccccc
Q 002278 383 NNFKGKVPTELGRIINLDTLDLSVNNFSGSVPA---SIGDLEHLLTLNLSRNHLNGLLPAEFGNLRSIQTIDMSFNQLSG 459 (943)
Q Consensus 383 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~---~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 459 (943)
|.++......|..+++|+.|||++|.|+..+.+ .|.+|+.|+.|+|.+|+|+.+....|.+|.+|+.|||.+|.|..
T Consensus 351 Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l~gNqlk~I~krAfsgl~~LE~LdL~~NaiaS 430 (873)
T KOG4194|consen 351 NSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKLRLTGNQLKSIPKRAFSGLEALEHLDLGDNAIAS 430 (873)
T ss_pred cchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhhheeecCceeeecchhhhccCcccceecCCCCccee
Confidence 988877777788888888888888888765443 47778888888888888887666788888888888888888887
Q ss_pred cCChhhhcccccceecccC
Q 002278 460 SIPAELGQLQNIISLILNN 478 (943)
Q Consensus 460 ~~p~~~~~l~~L~~L~L~~ 478 (943)
+-|..|..+ .|+.|.++.
T Consensus 431 Iq~nAFe~m-~Lk~Lv~nS 448 (873)
T KOG4194|consen 431 IQPNAFEPM-ELKELVMNS 448 (873)
T ss_pred ecccccccc-hhhhhhhcc
Confidence 778888887 787777654
No 21
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=9.8e-42 Score=336.18 Aligned_cols=237 Identities=21% Similarity=0.279 Sum_probs=210.3
Q ss_pred hhccccceEEeeeceEEEEEEEec-CCceEEEEEecccCc---ccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEE
Q 002278 615 TENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQYP---HNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLF 690 (943)
Q Consensus 615 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 690 (943)
.++|+..+.||.|+||.|.+++.+ ++..+|+|.+.+... +..+...+|..+++.+.||+++++++.+.+.+..++|
T Consensus 43 l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymv 122 (355)
T KOG0616|consen 43 LQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMV 122 (355)
T ss_pred hhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEE
Confidence 356888899999999999999987 477889999866532 3345567899999999999999999999999999999
Q ss_pred EEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCC
Q 002278 691 YDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPT 770 (943)
Q Consensus 691 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~ 770 (943)
|||++||.|..+++ ..++++++.+.-+|.||+.|++|||+. +|++||+||+|||+|.+|++||+|||+|+.+..
T Consensus 123 meyv~GGElFS~Lr---k~~rF~e~~arFYAAeivlAleylH~~---~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~ 196 (355)
T KOG0616|consen 123 MEYVPGGELFSYLR---KSGRFSEPHARFYAAEIVLALEYLHSL---DIIYRDLKPENLLLDQNGHIKITDFGFAKRVSG 196 (355)
T ss_pred EeccCCccHHHHHH---hcCCCCchhHHHHHHHHHHHHHHHHhc---CeeeccCChHHeeeccCCcEEEEeccceEEecC
Confidence 99999999999997 556799999999999999999999999 999999999999999999999999999997754
Q ss_pred CCCceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccccCc
Q 002278 771 AMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTC 850 (943)
Q Consensus 771 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 850 (943)
. +.+.+|||.|+|||++..++|+.++|.|||||++|||+.|.+||.+...+..+..+......++..+.+.
T Consensus 197 r----T~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~~v~fP~~fs~~----- 267 (355)
T KOG0616|consen 197 R----TWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEGKVKFPSYFSSD----- 267 (355)
T ss_pred c----EEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhCcccCCcccCHH-----
Confidence 3 4567899999999999999999999999999999999999999999988888877777777766665543
Q ss_pred cCHHHHHHHHHHHHHccCCCCCCC
Q 002278 851 VDLSAVRKTFQLALLCTKRYPSER 874 (943)
Q Consensus 851 ~~~~~~~~l~~l~~~cl~~dP~~R 874 (943)
+.+++...++.|-.+|
T Consensus 268 --------~kdLl~~LL~vD~t~R 283 (355)
T KOG0616|consen 268 --------AKDLLKKLLQVDLTKR 283 (355)
T ss_pred --------HHHHHHHHHhhhhHhh
Confidence 3478888888888888
No 22
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.7e-41 Score=381.76 Aligned_cols=265 Identities=28% Similarity=0.416 Sum_probs=219.4
Q ss_pred hhccccceEEeeeceEEEEEEEec------CCceEEEEEecccCcc-cHHHHHHHHHHHhcCCCCCcceeeeEEecCCcc
Q 002278 615 TENLSEKYIVGYGASSTVYKCALK------NSRPIAVKKLYNQYPH-NLREFETELETIGSIRHRNIVSLHGYALSPYGN 687 (943)
Q Consensus 615 ~~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 687 (943)
..+....+.||+|+||+||+|+.. +...||||.++..... ..++|++|+++++.++|||||+++|+|.+++..
T Consensus 485 r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~ 564 (774)
T KOG1026|consen 485 RSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPL 564 (774)
T ss_pred hhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCee
Confidence 344555678999999999999853 2467999999877655 778999999999999999999999999999999
Q ss_pred eEEEEEccCCChhhhccCCC-----------CCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCc
Q 002278 688 LLFYDYMVNGSLWDLLHGPS-----------KKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFD 756 (943)
Q Consensus 688 ~lv~e~~~~g~L~~~l~~~~-----------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~ 756 (943)
++|+|||..|+|.++|.... .+.+++..+.+.||.|||.|++||-++ .+|||||.++|+||.++..
T Consensus 565 ~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~---~FVHRDLATRNCLVge~l~ 641 (774)
T KOG1026|consen 565 CMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSH---HFVHRDLATRNCLVGENLV 641 (774)
T ss_pred EEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---cccccchhhhhceeccceE
Confidence 99999999999999986322 133488999999999999999999999 9999999999999999999
Q ss_pred eeecccccccccCCCCCce-eeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCccHHHHHHHhcc
Q 002278 757 AHLSDFGIARCIPTAMPHA-STFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKAD 834 (943)
Q Consensus 757 ~kl~DFGla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~ 834 (943)
|||+|||+++..-..+.+. .....-+.+|||||.+..++++++||||||||+|||+++ |+.||.+..+.+.+..+..+
T Consensus 642 VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe~i~~g 721 (774)
T KOG1026|consen 642 VKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIECIRAG 721 (774)
T ss_pred EEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHHHHHHHHcC
Confidence 9999999998653333322 212234789999999999999999999999999999999 99999988776655444332
Q ss_pred ccccccccCcccccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcCCCCCCc
Q 002278 835 DNTVMEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLVSLLPAPPAK 894 (943)
Q Consensus 835 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~~~~~~~~~ 894 (943)
.- .+. ...++.+++.+|..||+..|++||+++||-..|+......+..
T Consensus 722 ~l--L~~----------Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~s~~~ 769 (774)
T KOG1026|consen 722 QL--LSC----------PENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQASPKY 769 (774)
T ss_pred Cc--ccC----------CCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhcCccc
Confidence 22 111 1123468899999999999999999999999999877655443
No 23
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1e-41 Score=366.14 Aligned_cols=253 Identities=23% Similarity=0.338 Sum_probs=218.9
Q ss_pred hhccccceEEeeeceEEEEEEEec-CCceEEEEEecccCcccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEE
Q 002278 615 TENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDY 693 (943)
Q Consensus 615 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 693 (943)
...|.....||+|+.|.||.|... .++.||||++........+-+.+|+.+|+..+|+|||++++.|...++.++||||
T Consensus 272 ~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEy 351 (550)
T KOG0578|consen 272 RSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEY 351 (550)
T ss_pred hhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEee
Confidence 456777778999999999999855 5788999999777666677889999999999999999999999999999999999
Q ss_pred ccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCC
Q 002278 694 MVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMP 773 (943)
Q Consensus 694 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~ 773 (943)
++||+|.|.+. ...+++.++..|++++++||+|||.+ +|+|||||.+|||++.+|.+||+|||++..+.....
T Consensus 352 m~ggsLTDvVt----~~~~~E~qIA~Icre~l~aL~fLH~~---gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~ 424 (550)
T KOG0578|consen 352 MEGGSLTDVVT----KTRMTEGQIAAICREILQGLKFLHAR---GIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQS 424 (550)
T ss_pred cCCCchhhhhh----cccccHHHHHHHHHHHHHHHHHHHhc---ceeeeccccceeEeccCCcEEEeeeeeeeccccccC
Confidence 99999999985 44599999999999999999999999 999999999999999999999999999998866654
Q ss_pred ceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccccCccCH
Q 002278 774 HASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDL 853 (943)
Q Consensus 774 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 853 (943)
. +...+||+.|||||+.....|++|+||||||++++||+-|++||-.+.++..+..+.....+.... +..
T Consensus 425 K-R~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa~ng~P~lk~-~~k-------- 494 (550)
T KOG0578|consen 425 K-RSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPKLKN-PEK-------- 494 (550)
T ss_pred c-cccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHHhhcCCCCcCC-ccc--------
Confidence 3 444669999999999999999999999999999999999999999888876666554433322111 111
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 002278 854 SAVRKTFQLALLCTKRYPSERPTMQEVARVLV 885 (943)
Q Consensus 854 ~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~ 885 (943)
....+.+++.+|+..||++||++.|+++|-.
T Consensus 495 -lS~~~kdFL~~cL~~dv~~RasA~eLL~HpF 525 (550)
T KOG0578|consen 495 -LSPELKDFLDRCLVVDVEQRASAKELLEHPF 525 (550)
T ss_pred -cCHHHHHHHHHHhhcchhcCCCHHHHhcChh
Confidence 2246778999999999999999999999854
No 24
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=100.00 E-value=1.3e-45 Score=376.31 Aligned_cols=465 Identities=26% Similarity=0.353 Sum_probs=368.1
Q ss_pred CCCCCCCEEEeeCCcccccCCCCccCCCCCcEEeccCCCcCCccchhccccccceEEEecCcccccCCCcccCCCCCCcE
Q 002278 59 GDLRNLQSIDFQGNKLTGQIPDEIGNCGSLVHIELSDNSLYGDIPFSISKLKQLEFLNLKNNQLTGPIPSTLTQIPNLKT 138 (943)
Q Consensus 59 ~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~ 138 (943)
+.-..|+.|+|++|.++ .+-+.+.++..|.+|++.+|++. .+|.+++.+..++.|+.++|+++ .+|..+..+.+|+.
T Consensus 42 W~qv~l~~lils~N~l~-~l~~dl~nL~~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~ls-~lp~~i~s~~~l~~ 118 (565)
T KOG0472|consen 42 WEQVDLQKLILSHNDLE-VLREDLKNLACLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKLS-ELPEQIGSLISLVK 118 (565)
T ss_pred hhhcchhhhhhccCchh-hccHhhhcccceeEEEeccchhh-hCCHHHHHHHHHHHhhcccchHh-hccHHHhhhhhhhh
Confidence 34467889999999999 66667899999999999999999 89999999999999999999999 89999999999999
Q ss_pred EEEeccccccccchhccccccceeccccCCccCCCCCcccccccccceeeccceecccccCCCCcCCCcccEEEeecccc
Q 002278 139 LDLARNQLTGEIPRLIYWNEVLQYLGLRGNALTGMLSPDMCQLTGLWYFDVRGNNLTGTIPDSIGNCTSFEILDISYNQI 218 (943)
Q Consensus 139 L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~l~~l~~L~~L~Ls~N~l 218 (943)
|++++|.+. .+|+.++.+..|+.|+..+|++.+. |+++..+.+|..+++.+|+++...|..+. ++.|++||+..|-+
T Consensus 119 l~~s~n~~~-el~~~i~~~~~l~dl~~~~N~i~sl-p~~~~~~~~l~~l~~~~n~l~~l~~~~i~-m~~L~~ld~~~N~L 195 (565)
T KOG0472|consen 119 LDCSSNELK-ELPDSIGRLLDLEDLDATNNQISSL-PEDMVNLSKLSKLDLEGNKLKALPENHIA-MKRLKHLDCNSNLL 195 (565)
T ss_pred hhcccccee-ecCchHHHHhhhhhhhccccccccC-chHHHHHHHHHHhhccccchhhCCHHHHH-HHHHHhcccchhhh
Confidence 999999998 7888899999999999999999976 56788899999999999999965555444 99999999999999
Q ss_pred cCcCCCCCCcceEeEEEecCccccccCCccccccCCCcEEecCCCCCCCCCCcccCCCCCcceEEecCCCCCCCCCCCcC
Q 002278 219 TGEIPYNIGFLQVATLSLQGNKLTGKIPEVIGLMQALAVLDLSENELVGPIPPILGNLSYTGKLYLHGNKLTGPIPPELG 298 (943)
Q Consensus 219 ~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 298 (943)
+...|...+..+|..|+|..|+|. ..| .|..+..|..|+++.|+|.....+...++..+..|+|.+|+++ ..|..++
T Consensus 196 ~tlP~~lg~l~~L~~LyL~~Nki~-~lP-ef~gcs~L~Elh~g~N~i~~lpae~~~~L~~l~vLDLRdNklk-e~Pde~c 272 (565)
T KOG0472|consen 196 ETLPPELGGLESLELLYLRRNKIR-FLP-EFPGCSLLKELHVGENQIEMLPAEHLKHLNSLLVLDLRDNKLK-EVPDEIC 272 (565)
T ss_pred hcCChhhcchhhhHHHHhhhcccc-cCC-CCCccHHHHHHHhcccHHHhhHHHHhcccccceeeeccccccc-cCchHHH
Confidence 844444444557888888888887 355 6777888888888888887433344558888888888888888 6788888
Q ss_pred CCCcCcEEEcccCccccccccccCCcccceEEEccccccCCcCcccccCCC--cCcEEEe--eCCccc---------Cc-
Q 002278 299 NMSKLSYLQLQNNQLVGTIPAELGKLEQLFELNLADNNLEGPIPHNISSCT--ALNQFNV--HGNRLS---------GA- 364 (943)
Q Consensus 299 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~--~L~~L~L--~~N~l~---------~~- 364 (943)
.+++|.+||+++|.|+ ..|..++++ .|+.|-+.+|.+..+-.+.+..-+ -|++|.= ..-.++ ..
T Consensus 273 lLrsL~rLDlSNN~is-~Lp~sLgnl-hL~~L~leGNPlrTiRr~ii~~gT~~vLKyLrs~~~~dglS~se~~~e~~~t~ 350 (565)
T KOG0472|consen 273 LLRSLERLDLSNNDIS-SLPYSLGNL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDGLSQSEGGTETAMTL 350 (565)
T ss_pred HhhhhhhhcccCCccc-cCCcccccc-eeeehhhcCCchHHHHHHHHcccHHHHHHHHHHhhccCCCCCCcccccccCCC
Confidence 8888888888888888 667778888 788888888887643222211111 1222210 000110 00
Q ss_pred ccc---cccccCccceeeccCCcCCCCCCCCCCCCCC---ccEEecCCCcCCCccCCCcccccccce-eecccccccccC
Q 002278 365 IPS---SFRNLGSLTYLNLSRNNFKGKVPTELGRIIN---LDTLDLSVNNFSGSVPASIGDLEHLLT-LNLSRNHLNGLL 437 (943)
Q Consensus 365 ~~~---~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~---L~~L~Ls~N~l~~~~~~~~~~l~~L~~-L~Ls~N~l~~~~ 437 (943)
.+. ....+.+.+.|+++.-+++ .+|+....... .+..+++.|++. ++|..+..+..+++ +.+++|.+. .+
T Consensus 351 ~~~~~~~~~~~i~tkiL~~s~~qlt-~VPdEVfea~~~~~Vt~VnfskNqL~-elPk~L~~lkelvT~l~lsnn~is-fv 427 (565)
T KOG0472|consen 351 PSESFPDIYAIITTKILDVSDKQLT-LVPDEVFEAAKSEIVTSVNFSKNQLC-ELPKRLVELKELVTDLVLSNNKIS-FV 427 (565)
T ss_pred CCCcccchhhhhhhhhhcccccccc-cCCHHHHHHhhhcceEEEecccchHh-hhhhhhHHHHHHHHHHHhhcCccc-cc
Confidence 111 2234567899999999998 67776555444 789999999999 78998888887765 566666665 88
Q ss_pred CccccCCCccceecccCccccccCChhhhcccccceecccCcccCCCCCCcCccccCCcccccCCccccccCCC-CcccC
Q 002278 438 PAEFGNLRSIQTIDMSFNQLSGSIPAELGQLQNIISLILNNNNLQGGIPDQLSNCFSLSNLNVSYNNLSGIIPP-IRNFS 516 (943)
Q Consensus 438 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~-~~~~~ 516 (943)
|..+..+++|..|+|++|-+. .+|.+++.+..|+.|++++|++. .+|..+..+..|+.+-.++|++..+.|. +....
T Consensus 428 ~~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~NrFr-~lP~~~y~lq~lEtllas~nqi~~vd~~~l~nm~ 505 (565)
T KOG0472|consen 428 PLELSQLQKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNLSFNRFR-MLPECLYELQTLETLLASNNQIGSVDPSGLKNMR 505 (565)
T ss_pred hHHHHhhhcceeeecccchhh-hcchhhhhhhhhheecccccccc-cchHHHhhHHHHHHHHhccccccccChHHhhhhh
Confidence 999999999999999999998 89999999999999999999998 8898888888899999999999999887 56677
Q ss_pred cCCCCccccCCCCCCCCCCCccC
Q 002278 517 RFSSNSFIGNPLLCGNWIGSICG 539 (943)
Q Consensus 517 ~~~~~~~~~Np~~c~~~~~~~c~ 539 (943)
.+..+.+.+|...--+|.-..|.
T Consensus 506 nL~tLDL~nNdlq~IPp~Lgnmt 528 (565)
T KOG0472|consen 506 NLTTLDLQNNDLQQIPPILGNMT 528 (565)
T ss_pred hcceeccCCCchhhCChhhcccc
Confidence 78888888887655454434443
No 25
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-40 Score=345.60 Aligned_cols=264 Identities=25% Similarity=0.379 Sum_probs=218.8
Q ss_pred HhhccccceEEeeeceEEEEEEEec-CCceEEEEEecccC-cccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEE
Q 002278 614 STENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQY-PHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFY 691 (943)
Q Consensus 614 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 691 (943)
..+.|+...+||.|..++||+|+.. .+..||||++.-.. ......+++|++.++.++||||++++..|..+...|+||
T Consensus 24 n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVm 103 (516)
T KOG0582|consen 24 NAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVM 103 (516)
T ss_pred CccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEee
Confidence 4567889999999999999999954 57899999995433 334688999999999999999999999999999999999
Q ss_pred EEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCC
Q 002278 692 DYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTA 771 (943)
Q Consensus 692 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~ 771 (943)
.||.+|++.++++..-. ..+++..+..|.+++++||.|||.+ |.||||||+.|||++++|.|||+|||.+..+...
T Consensus 104 pfMa~GS~ldIik~~~~-~Gl~E~~Ia~iLre~LkaL~YLH~~---G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~ 179 (516)
T KOG0582|consen 104 PFMAGGSLLDIIKTYYP-DGLEEASIATILREVLKALDYLHQN---GHIHRDVKAGNILIDSDGTVKLADFGVSASLFDS 179 (516)
T ss_pred hhhcCCcHHHHHHHHcc-ccccHHHHHHHHHHHHHHHHHHHhc---CceecccccccEEEcCCCcEEEcCceeeeeeccc
Confidence 99999999999975432 3489999999999999999999999 9999999999999999999999999998877544
Q ss_pred CCce--e-eeEecccceeCcccccc--CCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCccc
Q 002278 772 MPHA--S-TFVLGTIGYIDPEYAHT--SRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEV 846 (943)
Q Consensus 772 ~~~~--~-~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 846 (943)
.... + ....||+.|||||++.. ..|+.|+||||||++..||.+|..||....++..+........+.+.... .
T Consensus 180 G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp~~~t~~--~ 257 (516)
T KOG0582|consen 180 GDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQNDPPTLLTSG--L 257 (516)
T ss_pred CceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCCCCccccc--C
Confidence 3222 1 34579999999999543 57999999999999999999999999988888777777666554333111 1
Q ss_pred ccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 002278 847 SVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVL 884 (943)
Q Consensus 847 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L 884 (943)
. ..........+.+++..|+.+||.+|||+++++++-
T Consensus 258 ~-~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~ 294 (516)
T KOG0582|consen 258 D-KDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKHA 294 (516)
T ss_pred C-hHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhccH
Confidence 1 111122335778899999999999999999999864
No 26
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-40 Score=362.73 Aligned_cols=256 Identities=22% Similarity=0.283 Sum_probs=217.0
Q ss_pred HhhccccceEEeeeceEEEEEEEec-CCceEEEEEeccc----Cc-ccHHHHHHHHHHHhcCC-CCCcceeeeEEecCCc
Q 002278 614 STENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQ----YP-HNLREFETELETIGSIR-HRNIVSLHGYALSPYG 686 (943)
Q Consensus 614 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~----~~-~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~ 686 (943)
..+.|...+.||+|+||+|+.|.+. .++.||+|.+.+. .. ...+.+.+|+.+++.++ ||||+++++++.....
T Consensus 15 ~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~ 94 (370)
T KOG0583|consen 15 SIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTK 94 (370)
T ss_pred ccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCe
Confidence 4568999999999999999999865 5799999966543 11 23456778999999999 9999999999999999
Q ss_pred ceEEEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCC-Cceeecccccc
Q 002278 687 NLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDEN-FDAHLSDFGIA 765 (943)
Q Consensus 687 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~-~~~kl~DFGla 765 (943)
.++||||+.||+|.+++. ..+++.+..+..+++|++.|++|+|++ ||+||||||+||+++.+ +.+||+|||++
T Consensus 95 ~~ivmEy~~gGdL~~~i~---~~g~l~E~~ar~~F~Qlisav~y~H~~---gi~HRDLK~ENilld~~~~~~Kl~DFG~s 168 (370)
T KOG0583|consen 95 IYIVMEYCSGGDLFDYIV---NKGRLKEDEARKYFRQLISAVAYCHSR---GIVHRDLKPENILLDGNEGNLKLSDFGLS 168 (370)
T ss_pred EEEEEEecCCccHHHHHH---HcCCCChHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEecCCCCCEEEeccccc
Confidence 999999999999999997 357799999999999999999999999 99999999999999999 99999999999
Q ss_pred cccCCCCCceeeeEecccceeCccccccCC-CC-CcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccC
Q 002278 766 RCIPTAMPHASTFVLGTIGYIDPEYAHTSR-LN-EKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVD 843 (943)
Q Consensus 766 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~-~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 843 (943)
.... .........+||+.|+|||++.+.. |+ .++||||+||+||.|++|+.||++.........+......++..+.
T Consensus 169 ~~~~-~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~~~~~~p~~~~ 247 (370)
T KOG0583|consen 169 AISP-GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRKGEFKIPSYLL 247 (370)
T ss_pred cccC-CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhcCCccCCCCcC
Confidence 9874 2223344567999999999999977 76 7999999999999999999999987665555555554455555442
Q ss_pred cccccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcC
Q 002278 844 PEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLVSLL 888 (943)
Q Consensus 844 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~~~ 888 (943)
...+..++.+|+..||.+|+|+.+++++-|-..
T Consensus 248 ------------S~~~~~Li~~mL~~~P~~R~t~~~i~~h~w~~~ 280 (370)
T KOG0583|consen 248 ------------SPEARSLIEKMLVPDPSTRITLLEILEHPWFQK 280 (370)
T ss_pred ------------CHHHHHHHHHHcCCCcccCCCHHHHhhChhhcc
Confidence 135568999999999999999999998776544
No 27
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=1.7e-41 Score=359.52 Aligned_cols=247 Identities=27% Similarity=0.366 Sum_probs=211.4
Q ss_pred hccccceEEeeeceEEEEEEEecC-CceEEEEEecccC--cccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEE
Q 002278 616 ENLSEKYIVGYGASSTVYKCALKN-SRPIAVKKLYNQY--PHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYD 692 (943)
Q Consensus 616 ~~~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 692 (943)
++|.+.+.||+|+||.||||+.+. .+.||+|.+.+.. .+..+.+.+|+++++.++|||||.++++|+...+.++|.|
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte 81 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE 81 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence 567788889999999999999774 5778999886543 3445678999999999999999999999999999999999
Q ss_pred EccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCC
Q 002278 693 YMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAM 772 (943)
Q Consensus 693 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~ 772 (943)
|+.| +|..++. ..+.++++.+..++.+++.||.|||+. +|+|||+||+||+++.+|++|++|||+|+.+...
T Consensus 82 ~a~g-~L~~il~---~d~~lpEe~v~~~a~~LVsaL~yLhs~---rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~- 153 (808)
T KOG0597|consen 82 YAVG-DLFTILE---QDGKLPEEQVRAIAYDLVSALYYLHSN---RILHRDMKPQNILLEKGGTLKLCDFGLARAMSTN- 153 (808)
T ss_pred hhhh-hHHHHHH---hccCCCHHHHHHHHHHHHHHHHHHHhc---CcccccCCcceeeecCCCceeechhhhhhhcccC-
Confidence 9976 9999997 567899999999999999999999999 9999999999999999999999999999988654
Q ss_pred CceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhcccc-ccccccCcccccCcc
Q 002278 773 PHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDN-TVMEAVDPEVSVTCV 851 (943)
Q Consensus 773 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 851 (943)
....+...|||-|||||+..+.+|+..+|+||+||++||+++|++||....-. +++.....+. .++.
T Consensus 154 t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~-~Lv~~I~~d~v~~p~----------- 221 (808)
T KOG0597|consen 154 TSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSIT-QLVKSILKDPVKPPS----------- 221 (808)
T ss_pred ceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHHH-HHHHHHhcCCCCCcc-----------
Confidence 34445567999999999999999999999999999999999999999865433 3343333322 2222
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 002278 852 DLSAVRKTFQLALLCTKRYPSERPTMQEVARVL 884 (943)
Q Consensus 852 ~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L 884 (943)
.....+..++...+.+||.+|.|..+++.|-
T Consensus 222 --~~S~~f~nfl~gLL~kdP~~RltW~~Ll~Hp 252 (808)
T KOG0597|consen 222 --TASSSFVNFLQGLLIKDPAQRLTWTDLLGHP 252 (808)
T ss_pred --cccHHHHHHHHHHhhcChhhcccHHHHhcCh
Confidence 2234677899999999999999999998874
No 28
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=2.9e-40 Score=351.78 Aligned_cols=256 Identities=21% Similarity=0.250 Sum_probs=214.5
Q ss_pred HhhccccceEEeeeceEEEEEEEec-CCceEEEEEecccC---cccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceE
Q 002278 614 STENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQY---PHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLL 689 (943)
Q Consensus 614 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 689 (943)
..+.|+...+||+||||.||.|+-+ .|..+|+|++++.. ....+.+..|..+|....+|.||++|-.|++.+..|+
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYL 218 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYL 218 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEE
Confidence 5678999999999999999999977 47888999997764 3345667889999999999999999999999999999
Q ss_pred EEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccC
Q 002278 690 FYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIP 769 (943)
Q Consensus 690 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~ 769 (943)
||||++||++..+|. ....+++..+..++.+++-|++.+|+. |||||||||+|+|||..|++||+|||+++-+.
T Consensus 219 iMEylPGGD~mTLL~---~~~~L~e~~arfYiaE~vlAI~~iH~~---gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~ 292 (550)
T KOG0605|consen 219 IMEYLPGGDMMTLLM---RKDTLTEDWARFYIAETVLAIESIHQL---GYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLD 292 (550)
T ss_pred EEEecCCccHHHHHH---hcCcCchHHHHHHHHHHHHHHHHHHHc---CcccccCChhheeecCCCCEeeccccccchhh
Confidence 999999999999997 567899999999999999999999999 99999999999999999999999999995431
Q ss_pred C-----------------------CCCc---ee--------------------eeEecccceeCccccccCCCCCcchhh
Q 002278 770 T-----------------------AMPH---AS--------------------TFVLGTIGYIDPEYAHTSRLNEKSDVY 803 (943)
Q Consensus 770 ~-----------------------~~~~---~~--------------------~~~~gt~~y~aPE~~~~~~~~~~~Dvw 803 (943)
. +... .. ...+|||.|||||++.+..|+..+|+|
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwW 372 (550)
T KOG0605|consen 293 KKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWW 372 (550)
T ss_pred hhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHH
Confidence 1 0000 00 114699999999999999999999999
Q ss_pred hHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccccCccCHHHHHHHHHHHHHccCCCCCCCC---CHHHH
Q 002278 804 SFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERP---TMQEV 880 (943)
Q Consensus 804 SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP---t~~el 880 (943)
|+|||+|||+.|.+||.++++.+.+..+..+...+......... .+..++|.+|+. ||++|- .++||
T Consensus 373 SLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~~~~~s---------~eA~DLI~rll~-d~~~RLG~~G~~EI 442 (550)
T KOG0605|consen 373 SLGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFPEEVDLS---------DEAKDLITRLLC-DPENRLGSKGAEEI 442 (550)
T ss_pred HHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCCcCccc---------HHHHHHHHHHhc-CHHHhcCcccHHHH
Confidence 99999999999999999999998888777655432222111111 345688999888 999997 58888
Q ss_pred HHHHh
Q 002278 881 ARVLV 885 (943)
Q Consensus 881 ~~~L~ 885 (943)
.+|-+
T Consensus 443 K~HPf 447 (550)
T KOG0605|consen 443 KKHPF 447 (550)
T ss_pred hcCCc
Confidence 77653
No 29
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=2.9e-40 Score=330.56 Aligned_cols=265 Identities=24% Similarity=0.248 Sum_probs=222.5
Q ss_pred HhhccccceEEeeeceEEEEEEEec-CCceEEEEEecccCcc--cHHHHHHHHHHHhcCCCCCcceeeeEEec--CCcce
Q 002278 614 STENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQYPH--NLREFETELETIGSIRHRNIVSLHGYALS--PYGNL 688 (943)
Q Consensus 614 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~ 688 (943)
..++|+..+.|++|.||.||+|+++ +++.||+|+++..... ..-...+|+.++.+.+|||||.+..+... -+..|
T Consensus 74 sv~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy 153 (419)
T KOG0663|consen 74 SVEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIY 153 (419)
T ss_pred cHHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceee
Confidence 4567888999999999999999976 5788999999754322 22346789999999999999999988754 35789
Q ss_pred EEEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeeccccccccc
Q 002278 689 LFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCI 768 (943)
Q Consensus 689 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~ 768 (943)
+|||||+. +|..+++.. ..++...++..+..|+++|++|||.. .|+||||||+|+|+...|.+||+|||+|+.+
T Consensus 154 ~VMe~~Eh-DLksl~d~m--~q~F~~~evK~L~~QlL~glk~lH~~---wilHRDLK~SNLLm~~~G~lKiaDFGLAR~y 227 (419)
T KOG0663|consen 154 IVMEYVEH-DLKSLMETM--KQPFLPGEVKTLMLQLLRGLKHLHDN---WILHRDLKTSNLLLSHKGILKIADFGLAREY 227 (419)
T ss_pred eeHHHHHh-hHHHHHHhc--cCCCchHHHHHHHHHHHHHHHHHhhc---eeEecccchhheeeccCCcEEecccchhhhh
Confidence 99999965 788888743 35799999999999999999999999 9999999999999999999999999999998
Q ss_pred CCCCCceeeeEecccceeCccccccC-CCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccc
Q 002278 769 PTAMPHASTFVLGTIGYIDPEYAHTS-RLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVS 847 (943)
Q Consensus 769 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 847 (943)
+.... ..+..+-|.+|+|||++.+. .|+++.|+||+|||+.||+++++.|.+...++++..+....+...+..+|.+.
T Consensus 228 gsp~k-~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~ 306 (419)
T KOG0663|consen 228 GSPLK-PYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYS 306 (419)
T ss_pred cCCcc-cCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCcc
Confidence 76633 33445579999999998875 59999999999999999999999999999999999998888888888877764
Q ss_pred cCcc-------------------CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 002278 848 VTCV-------------------DLSAVRKTFQLALLCTKRYPSERPTMQEVARVLV 885 (943)
Q Consensus 848 ~~~~-------------------~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~ 885 (943)
.... .......-++++...+..||.+|.||.|.++|=+
T Consensus 307 ~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~~ 363 (419)
T KOG0663|consen 307 ELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHEY 363 (419)
T ss_pred ccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcccc
Confidence 2210 0011245578999999999999999999999854
No 30
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-40 Score=357.61 Aligned_cols=265 Identities=29% Similarity=0.422 Sum_probs=213.1
Q ss_pred HHHHHhhccccceEEeeeceEEEEEEEecCCceEEEEEecccC--cccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcc
Q 002278 610 DIMRSTENLSEKYIVGYGASSTVYKCALKNSRPIAVKKLYNQY--PHNLREFETELETIGSIRHRNIVSLHGYALSPYGN 687 (943)
Q Consensus 610 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 687 (943)
+.....+++.....||+|+||+||+|+|.+ .||||++.... ++..+.|..|+.++++-+|.||+-+.|||..+..
T Consensus 386 ~WeIp~~ev~l~~rIGsGsFGtV~Rg~whG--dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~- 462 (678)
T KOG0193|consen 386 EWEIPPEEVLLGERIGSGSFGTVYRGRWHG--DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL- 462 (678)
T ss_pred ccccCHHHhhccceeccccccceeeccccc--ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce-
Confidence 334455667788899999999999999873 59999986544 4567889999999999999999999999998876
Q ss_pred eEEEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccc
Q 002278 688 LLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARC 767 (943)
Q Consensus 688 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~ 767 (943)
.||..+|+|.+|+.+++.. ..+++..+.+.||+|||+|+.|||.+ +|||||||..||++.+++.|||+|||++..
T Consensus 463 AIiTqwCeGsSLY~hlHv~--etkfdm~~~idIAqQiaqGM~YLHAK---~IIHrDLKSnNIFl~~~~kVkIgDFGLatv 537 (678)
T KOG0193|consen 463 AIITQWCEGSSLYTHLHVQ--ETKFDMNTTIDIAQQIAQGMDYLHAK---NIIHRDLKSNNIFLHEDLKVKIGDFGLATV 537 (678)
T ss_pred eeeehhccCchhhhhccch--hhhhhHHHHHHHHHHHHHhhhhhhhh---hhhhhhccccceEEccCCcEEEecccceee
Confidence 9999999999999999864 35799999999999999999999999 999999999999999999999999999965
Q ss_pred cCCC-CCceeeeEecccceeCcccccc---CCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccC
Q 002278 768 IPTA-MPHASTFVLGTIGYIDPEYAHT---SRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVD 843 (943)
Q Consensus 768 ~~~~-~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 843 (943)
...- .........|...|||||++.. .+|++++||||||+|+|||+||..||. ....++++.......-.++...
T Consensus 538 k~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPys-i~~~dqIifmVGrG~l~pd~s~ 616 (678)
T KOG0193|consen 538 KTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYS-IQNRDQIIFMVGRGYLMPDLSK 616 (678)
T ss_pred eeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcC-CCChhheEEEecccccCccchh
Confidence 3211 1111222347889999999875 368999999999999999999999998 4444443322222211111111
Q ss_pred cccccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcCCC
Q 002278 844 PEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLVSLLPA 890 (943)
Q Consensus 844 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~~~~~ 890 (943)
. ...+.+++.+++..||..+|++||.+.+++..|+.+.+.
T Consensus 617 ~-------~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~~ 656 (678)
T KOG0193|consen 617 I-------RSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLPS 656 (678)
T ss_pred h-------hccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhhc
Confidence 1 113446788999999999999999999999999888774
No 31
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=8.9e-41 Score=366.86 Aligned_cols=271 Identities=26% Similarity=0.421 Sum_probs=226.1
Q ss_pred ccCHHHHHHHhhc---------cccceEEeeeceEEEEEEEecC----CceEEEEEecccCc-ccHHHHHHHHHHHhcCC
Q 002278 605 IHTFDDIMRSTEN---------LSEKYIVGYGASSTVYKCALKN----SRPIAVKKLYNQYP-HNLREFETELETIGSIR 670 (943)
Q Consensus 605 ~~~~~~~~~~~~~---------~~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~ 670 (943)
.++|+|.-.+..+ ..+.++||.|.||.||+|+++- ...||||.++.... +...+|..|+.+|.++.
T Consensus 609 P~TYEDPnqAvreFakEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFd 688 (996)
T KOG0196|consen 609 PHTYEDPNQAVREFAKEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFD 688 (996)
T ss_pred CccccCccHHHHHhhhhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCC
Confidence 4556555544443 4456799999999999999863 35799999987764 45678999999999999
Q ss_pred CCCcceeeeEEecCCcceEEEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEE
Q 002278 671 HRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNIL 750 (943)
Q Consensus 671 h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nil 750 (943)
||||+++.|+.......+||.|||++|+|..+|+.. .+.+.+.+...|.++||.|++||-+. ++|||||.++|||
T Consensus 689 HPNIIrLEGVVTks~PvMIiTEyMENGsLDsFLR~~--DGqftviQLVgMLrGIAsGMkYLsdm---~YVHRDLAARNIL 763 (996)
T KOG0196|consen 689 HPNIIRLEGVVTKSKPVMIITEYMENGSLDSFLRQN--DGQFTVIQLVGMLRGIASGMKYLSDM---NYVHRDLAARNIL 763 (996)
T ss_pred CCcEEEEEEEEecCceeEEEhhhhhCCcHHHHHhhc--CCceEeehHHHHHHHHHHHhHHHhhc---Cchhhhhhhhhee
Confidence 999999999999999999999999999999999854 46699999999999999999999998 9999999999999
Q ss_pred ECCCCceeecccccccccCCCCCceeeeE--ecccceeCccccccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCccHHH
Q 002278 751 IDENFDAHLSDFGIARCIPTAMPHASTFV--LGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQ 827 (943)
Q Consensus 751 l~~~~~~kl~DFGla~~~~~~~~~~~~~~--~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~p~~~~~~~~~ 827 (943)
++.+-.+|++|||+++.++++.....+.. .-+.+|.|||.+...+++.++||||||++|||.++ |.+||.+..+.+.
T Consensus 764 VNsnLvCKVsDFGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdV 843 (996)
T KOG0196|consen 764 VNSNLVCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDV 843 (996)
T ss_pred eccceEEEeccccceeecccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHHH
Confidence 99999999999999998866553333322 23579999999999999999999999999999887 9999998877654
Q ss_pred HHHHhccccccccccCcccccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcCCCCC
Q 002278 828 LIMSKADDNTVMEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLVSLLPAPP 892 (943)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~~~~~~~ 892 (943)
+..+. +...++.. .+++..+.++|..||++|-.+||.+.+++.+|.++...+.
T Consensus 844 IkaIe-~gyRLPpP-----------mDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrnP~ 896 (996)
T KOG0196|consen 844 IKAIE-QGYRLPPP-----------MDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRNPN 896 (996)
T ss_pred HHHHH-hccCCCCC-----------CCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCch
Confidence 43332 22222221 1345688999999999999999999999999999887654
No 32
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6e-41 Score=348.39 Aligned_cols=251 Identities=24% Similarity=0.367 Sum_probs=212.8
Q ss_pred hhccccceEEeeeceEEEEEEEec-CCceEEEEEeccc-CcccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEE
Q 002278 615 TENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQ-YPHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYD 692 (943)
Q Consensus 615 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 692 (943)
...|+....||+|+||.||+|.+. .++.||+|.+.-. .....+++++|+.++..++++||.++|+.+..+...+++||
T Consensus 12 ~~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMe 91 (467)
T KOG0201|consen 12 ELLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIME 91 (467)
T ss_pred ccccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHH
Confidence 346777789999999999999976 5788999998543 34556789999999999999999999999999999999999
Q ss_pred EccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCC
Q 002278 693 YMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAM 772 (943)
Q Consensus 693 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~ 772 (943)
|+.||++.+.++ ....+++..+.-+++++..|+.|||++ +.+|||||+.||++..+|.||++|||.+..+....
T Consensus 92 y~~gGsv~~lL~---~~~~~~E~~i~~ilre~l~~l~ylH~~---~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~ 165 (467)
T KOG0201|consen 92 YCGGGSVLDLLK---SGNILDEFEIAVILREVLKGLDYLHSE---KKIHRDIKAANILLSESGDVKLADFGVAGQLTNTV 165 (467)
T ss_pred HhcCcchhhhhc---cCCCCccceeeeehHHHHHHhhhhhhc---ceecccccccceeEeccCcEEEEecceeeeeechh
Confidence 999999999996 344458888888999999999999999 99999999999999999999999999999886665
Q ss_pred CceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccccCccC
Q 002278 773 PHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVD 852 (943)
Q Consensus 773 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 852 (943)
... ...+||+.|||||++.+..|+.|+||||||++.+||++|.+|+....++..+ .-+++..+|.+...
T Consensus 166 ~rr-~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvl-------flIpk~~PP~L~~~--- 234 (467)
T KOG0201|consen 166 KRR-KTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVL-------FLIPKSAPPRLDGD--- 234 (467)
T ss_pred hcc-ccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEE-------EeccCCCCCccccc---
Confidence 444 4567999999999999999999999999999999999999999876653211 12233334444432
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 002278 853 LSAVRKTFQLALLCTKRYPSERPTMQEVARVL 884 (943)
Q Consensus 853 ~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L 884 (943)
....+.+++..|++++|+.||+|.++++|-
T Consensus 235 --~S~~~kEFV~~CL~k~P~~RpsA~~LLKh~ 264 (467)
T KOG0201|consen 235 --FSPPFKEFVEACLDKNPEFRPSAKELLKHK 264 (467)
T ss_pred --cCHHHHHHHHHHhhcCcccCcCHHHHhhhH
Confidence 224577899999999999999999999874
No 33
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=7.5e-40 Score=354.75 Aligned_cols=251 Identities=22% Similarity=0.273 Sum_probs=213.9
Q ss_pred hccccceEEeeeceEEEEEEEec-CCceEEEEEecccC---cccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEE
Q 002278 616 ENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQY---PHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFY 691 (943)
Q Consensus 616 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 691 (943)
+-|+.++.||.|+.|.|-.|++. .|+.+|||.+.+.. ......+++|+-+|+-+.||||+++|+++++..+.|+|.
T Consensus 12 GpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvl 91 (786)
T KOG0588|consen 12 GPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVL 91 (786)
T ss_pred cceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEE
Confidence 45677888999999999999975 68999999986552 334567899999999999999999999999999999999
Q ss_pred EEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCC
Q 002278 692 DYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTA 771 (943)
Q Consensus 692 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~ 771 (943)
||+++|.|++++. .++++++.++.+++.||+.|+.|+|.. +|+|||+||+|+|+|..+.+||+|||+|.....+
T Consensus 92 Eyv~gGELFdylv---~kG~l~e~eaa~ff~QIi~gv~yCH~~---~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~g 165 (786)
T KOG0588|consen 92 EYVPGGELFDYLV---RKGPLPEREAAHFFRQILDGVSYCHAF---NICHRDLKPENLLLDVKNNIKIADFGMASLEVPG 165 (786)
T ss_pred EecCCchhHHHHH---hhCCCCCHHHHHHHHHHHHHHHHHhhh---cceeccCCchhhhhhcccCEeeeccceeecccCC
Confidence 9999999999997 677899999999999999999999999 9999999999999999999999999999865433
Q ss_pred CCceeeeEecccceeCccccccCCCC-CcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccccCc
Q 002278 772 MPHASTFVLGTIGYIDPEYAHTSRLN-EKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTC 850 (943)
Q Consensus 772 ~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 850 (943)
. .-...||++.|.|||++.|.+|. .++||||.|||||.|+||+.||++++-...+.....+...++..+.
T Consensus 166 k--lLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~G~f~MPs~Is------- 236 (786)
T KOG0588|consen 166 K--LLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQRGVFEMPSNIS------- 236 (786)
T ss_pred c--cccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHHcCcccCCCcCC-------
Confidence 2 23346799999999999998875 7999999999999999999999965544444444444444444433
Q ss_pred cCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhc
Q 002278 851 VDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLVSL 887 (943)
Q Consensus 851 ~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~~ 887 (943)
.+..+++.+|+..||++|.|++||.+|.+-.
T Consensus 237 ------~eaQdLLr~ml~VDp~~RiT~~eI~kHP~l~ 267 (786)
T KOG0588|consen 237 ------SEAQDLLRRMLDVDPSTRITTEEILKHPFLS 267 (786)
T ss_pred ------HHHHHHHHHHhccCccccccHHHHhhCchhh
Confidence 2445899999999999999999999997643
No 34
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=7.5e-40 Score=313.76 Aligned_cols=253 Identities=23% Similarity=0.338 Sum_probs=217.5
Q ss_pred HhhccccceEEeeeceEEEEEEEec-CCceEEEEEecccC---cccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceE
Q 002278 614 STENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQY---PHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLL 689 (943)
Q Consensus 614 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 689 (943)
+.++|++.+.||+|.||.||.|+.+ ++..||+|++.+.. .....++.+|+++-+.++||||.++|++|.+....|+
T Consensus 20 ~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyL 99 (281)
T KOG0580|consen 20 TLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYL 99 (281)
T ss_pred chhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEE
Confidence 4567899999999999999999966 56789999987643 3345678999999999999999999999999999999
Q ss_pred EEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccC
Q 002278 690 FYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIP 769 (943)
Q Consensus 690 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~ 769 (943)
++||.++|++...|++. ...++++.....++.|+|.|+.|+|.+ +|+||||||+|+|++..+..|++|||-+..-+
T Consensus 100 ilEya~~gel~k~L~~~-~~~~f~e~~~a~Yi~q~A~Al~y~h~k---~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p 175 (281)
T KOG0580|consen 100 ILEYAPRGELYKDLQEG-RMKRFDEQRAATYIKQLANALLYCHLK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP 175 (281)
T ss_pred EEEecCCchHHHHHHhc-ccccccccchhHHHHHHHHHHHHhccC---CcccCCCCHHHhccCCCCCeeccCCCceeecC
Confidence 99999999999999754 345689999999999999999999999 99999999999999999999999999998654
Q ss_pred CCCCceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccccC
Q 002278 770 TAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVT 849 (943)
Q Consensus 770 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 849 (943)
...+...+||..|.+||...+..++..+|+|++|++.||++.|.+||.+...-+.+.++...+-.+++.+.
T Consensus 176 ---~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k~~~~~p~~is------ 246 (281)
T KOG0580|consen 176 ---SNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRKVDLKFPSTIS------ 246 (281)
T ss_pred ---CCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHHccccCCcccC------
Confidence 23445678999999999999999999999999999999999999999987755555555554444443222
Q ss_pred ccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhh
Q 002278 850 CVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLVS 886 (943)
Q Consensus 850 ~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~ 886 (943)
....++|..|+..+|.+|.+..|+++|-|-
T Consensus 247 -------~~a~dlI~~ll~~~p~~r~~l~~v~~hpwI 276 (281)
T KOG0580|consen 247 -------GGAADLISRLLVKNPIERLALTEVMDHPWI 276 (281)
T ss_pred -------hhHHHHHHHHhccCccccccHHHHhhhHHH
Confidence 344589999999999999999999998763
No 35
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=7e-39 Score=356.36 Aligned_cols=262 Identities=25% Similarity=0.386 Sum_probs=205.6
Q ss_pred HhhccccceEEeeeceEEEEEEEec------CCceEEEEEecccC-cccHHHHHHHHHHHhcC-CCCCcceeeeEEecCC
Q 002278 614 STENLSEKYIVGYGASSTVYKCALK------NSRPIAVKKLYNQY-PHNLREFETELETIGSI-RHRNIVSLHGYALSPY 685 (943)
Q Consensus 614 ~~~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 685 (943)
..++|+..+.||+|+||.||+|.+. .++.||+|++.... ......+.+|+++++.+ +||||+++++++....
T Consensus 5 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~ 84 (338)
T cd05102 5 PRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPN 84 (338)
T ss_pred chhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCC
Confidence 4568999999999999999999742 24679999986543 23345788999999999 8999999999987654
Q ss_pred -cceEEEEEccCCChhhhccCCCC--------------------------------------------------------
Q 002278 686 -GNLLFYDYMVNGSLWDLLHGPSK-------------------------------------------------------- 708 (943)
Q Consensus 686 -~~~lv~e~~~~g~L~~~l~~~~~-------------------------------------------------------- 708 (943)
..+++|||+++|+|.+++.....
T Consensus 85 ~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (338)
T cd05102 85 GPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETD 164 (338)
T ss_pred CceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhcc
Confidence 57899999999999998864211
Q ss_pred ---CccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCCc-eeeeEecccc
Q 002278 709 ---KVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPH-ASTFVLGTIG 784 (943)
Q Consensus 709 ---~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~~-~~~~~~gt~~ 784 (943)
...+++.++..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++........ ......+++.
T Consensus 165 ~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~ 241 (338)
T cd05102 165 DLWKSPLTMEDLICYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLK 241 (338)
T ss_pred ccccCCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCcc
Confidence 13478889999999999999999999 9999999999999999999999999999865332211 1122345678
Q ss_pred eeCccccccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCccHHHHHHHhccccccccccCcccccCccCHHHHHHHHHHH
Q 002278 785 YIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAVRKTFQLA 863 (943)
Q Consensus 785 y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 863 (943)
|+|||++.+..++.++|||||||++|||++ |+.||.+................. ..+. .....+.+++
T Consensus 242 y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~------~~~~-----~~~~~l~~li 310 (338)
T cd05102 242 WMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGTRM------RAPE-----NATPEIYRIM 310 (338)
T ss_pred ccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhcCCCC------CCCC-----CCCHHHHHHH
Confidence 999999999999999999999999999997 999998654333322222211110 0110 1124677899
Q ss_pred HHccCCCCCCCCCHHHHHHHHhhcCC
Q 002278 864 LLCTKRYPSERPTMQEVARVLVSLLP 889 (943)
Q Consensus 864 ~~cl~~dP~~RPt~~el~~~L~~~~~ 889 (943)
..||+.||++|||+.++++.|+.+..
T Consensus 311 ~~cl~~dp~~RPs~~el~~~l~~~~~ 336 (338)
T cd05102 311 LACWQGDPKERPTFSALVEILGDLLQ 336 (338)
T ss_pred HHHccCChhhCcCHHHHHHHHHHHHh
Confidence 99999999999999999999987654
No 36
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=9.4e-41 Score=319.48 Aligned_cols=257 Identities=23% Similarity=0.294 Sum_probs=217.5
Q ss_pred HhhccccceEEeeeceEEEEEEEec-CCceEEEEEecc--cCcccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEE
Q 002278 614 STENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYN--QYPHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLF 690 (943)
Q Consensus 614 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 690 (943)
.+++|+..+.||+|+|+.||++... .|+++|+|.+.. -.....+++.+|+++-+.++|||||++.+.+.+....|+|
T Consensus 9 f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylv 88 (355)
T KOG0033|consen 9 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 88 (355)
T ss_pred cchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEE
Confidence 3567888889999999999999866 578899987742 2345678899999999999999999999999999999999
Q ss_pred EEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECC---CCceeecccccccc
Q 002278 691 YDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDE---NFDAHLSDFGIARC 767 (943)
Q Consensus 691 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~---~~~~kl~DFGla~~ 767 (943)
+|+|.||+|..-+- .+-.+++..+-.+++||++||.|+|.+ +|||||+||+|+++.+ ..-+|++|||+|..
T Consensus 89 Fe~m~G~dl~~eIV---~R~~ySEa~aSH~~rQiLeal~yCH~n---~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~ 162 (355)
T KOG0033|consen 89 FDLVTGGELFEDIV---AREFYSEADASHCIQQILEALAYCHSN---GIVHRDLKPENLLLASKAKGAAVKLADFGLAIE 162 (355)
T ss_pred EecccchHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeeeeccCCCceeecccceEEE
Confidence 99999999976554 234578888889999999999999999 9999999999999953 34599999999998
Q ss_pred cCCCCCceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccc
Q 002278 768 IPTAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVS 847 (943)
Q Consensus 768 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 847 (943)
+... .......|||+|||||+....+|+..+|||+-||+||-++.|++||.+++.-..+..+......+....++.+.
T Consensus 163 l~~g--~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd~~~~~w~~is 240 (355)
T KOG0033|consen 163 VNDG--EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYDYPSPEWDTVT 240 (355)
T ss_pred eCCc--cccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccCCCCcccCcCC
Confidence 8733 33445679999999999999999999999999999999999999999877666666666666666665566555
Q ss_pred cCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhc
Q 002278 848 VTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLVSL 887 (943)
Q Consensus 848 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~~ 887 (943)
+...+++++|+..||++|.|+.|.++|-|-.
T Consensus 241 ---------~~Ak~LvrrML~~dP~kRIta~EAL~HpWi~ 271 (355)
T KOG0033|consen 241 ---------PEAKSLIRRMLTVNPKKRITADEALKHPWIC 271 (355)
T ss_pred ---------HHHHHHHHHHhccChhhhccHHHHhCCchhc
Confidence 2345789999999999999999999987643
No 37
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-39 Score=330.28 Aligned_cols=264 Identities=24% Similarity=0.294 Sum_probs=212.6
Q ss_pred HhhccccceEEeeeceEEEEEEEec-CCceEEEEEecccC--cccHHHHHHHHHHHhcCCCCCcceeeeEEec-----CC
Q 002278 614 STENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQY--PHNLREFETELETIGSIRHRNIVSLHGYALS-----PY 685 (943)
Q Consensus 614 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-----~~ 685 (943)
....|...+.||+|+||.|++|.++ +++.||+|++.... ....++..+|++.++.++|+||+.+++++.. -.
T Consensus 20 i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~ 99 (359)
T KOG0660|consen 20 IPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFN 99 (359)
T ss_pred ccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccc
Confidence 3455666788999999999999976 58999999997443 3456778899999999999999999999865 24
Q ss_pred cceEEEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccc
Q 002278 686 GNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIA 765 (943)
Q Consensus 686 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla 765 (943)
..|+|+|+| +.+|...++ ....++...+..+++|+++||.|+|+. +|+||||||+|++++.++.+||+|||+|
T Consensus 100 DvYiV~elM-etDL~~iik---~~~~L~d~H~q~f~YQiLrgLKyiHSA---nViHRDLKPsNll~n~~c~lKI~DFGLA 172 (359)
T KOG0660|consen 100 DVYLVFELM-ETDLHQIIK---SQQDLTDDHAQYFLYQILRGLKYIHSA---NVIHRDLKPSNLLLNADCDLKICDFGLA 172 (359)
T ss_pred eeEEehhHH-hhHHHHHHH---cCccccHHHHHHHHHHHHHhcchhhcc---cccccccchhheeeccCCCEEeccccce
Confidence 579999999 678999886 445599999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCC-CCceeeeEecccceeCcccccc-CCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccC
Q 002278 766 RCIPTA-MPHASTFVLGTIGYIDPEYAHT-SRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVD 843 (943)
Q Consensus 766 ~~~~~~-~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 843 (943)
+..... .....+..+.|.+|+|||++.. ..|+.+.||||.|||+.||++|++-|.+.+..+++..+....+...+...
T Consensus 173 R~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l 252 (359)
T KOG0660|consen 173 RYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDL 252 (359)
T ss_pred eeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHH
Confidence 987542 1223355678999999998764 67999999999999999999999999999888887776655444332211
Q ss_pred cccc----------------cC--ccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 002278 844 PEVS----------------VT--CVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVL 884 (943)
Q Consensus 844 ~~~~----------------~~--~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L 884 (943)
..+. .. ..-........+++.+|+..||.+|+|++|+++|-
T Consensus 253 ~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hP 311 (359)
T KOG0660|consen 253 QKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHP 311 (359)
T ss_pred HHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcCh
Confidence 0000 00 00001224556899999999999999999999974
No 38
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.4e-39 Score=375.01 Aligned_cols=266 Identities=27% Similarity=0.427 Sum_probs=218.2
Q ss_pred hhccccceEEeeeceEEEEEEEecC--C----ceEEEEEecccC-cccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcc
Q 002278 615 TENLSEKYIVGYGASSTVYKCALKN--S----RPIAVKKLYNQY-PHNLREFETELETIGSIRHRNIVSLHGYALSPYGN 687 (943)
Q Consensus 615 ~~~~~~~~~lG~G~~g~Vy~~~~~~--~----~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 687 (943)
..+.+..+.||+|+||.||.|...+ + ..||+|++.+.. .+...+|.+|..+|+.++|||||+++|++.+....
T Consensus 691 ~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~ 770 (1025)
T KOG1095|consen 691 RKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPP 770 (1025)
T ss_pred hhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCc
Confidence 5566777899999999999999763 3 248999987654 45677899999999999999999999999999999
Q ss_pred eEEEEEccCCChhhhccCCC----CCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccc
Q 002278 688 LLFYDYMVNGSLWDLLHGPS----KKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFG 763 (943)
Q Consensus 688 ~lv~e~~~~g~L~~~l~~~~----~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFG 763 (943)
+|++|||++|+|..+|+..+ ....++..+.+.++.|||+|+.||+++ ++|||||.++|+|+++...|||+|||
T Consensus 771 ~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~---~fvHRDLAaRNCLL~~~r~VKIaDFG 847 (1025)
T KOG1095|consen 771 LILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESK---HFVHRDLAARNCLLDERRVVKIADFG 847 (1025)
T ss_pred EEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhC---CCcCcchhhhheeecccCcEEEcccc
Confidence 99999999999999998542 244688999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCceee-eEecccceeCccccccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCccHHHHHHHhccccccccc
Q 002278 764 IARCIPTAMPHAST-FVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKADDNTVMEA 841 (943)
Q Consensus 764 la~~~~~~~~~~~~-~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~ 841 (943)
+|+.+-........ ...=...|||||.+.++.++.|+|||||||++||++| |..||.+..+.+......... .
T Consensus 848 lArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~~~gg-R---- 922 (1025)
T KOG1095|consen 848 LARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDVLEGG-R---- 922 (1025)
T ss_pred hhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHHHhCC-c----
Confidence 99954333222221 1123468999999999999999999999999999999 999999888776554333322 1
Q ss_pred cCcccccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcCCCCCCcc
Q 002278 842 VDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLVSLLPAPPAKL 895 (943)
Q Consensus 842 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~~~~~~~~~~ 895 (943)
++ .+.. ++..++++|..||+.+|++||++..+++.+..+........
T Consensus 923 L~--~P~~-----CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~~~~~~ 969 (1025)
T KOG1095|consen 923 LD--PPSY-----CPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNAALGTI 969 (1025)
T ss_pred cC--CCCC-----CChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhhhccCc
Confidence 11 1111 23578899999999999999999999999888776654443
No 39
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=1.6e-38 Score=350.41 Aligned_cols=244 Identities=18% Similarity=0.240 Sum_probs=200.4
Q ss_pred eEEeeeceEEEEEEEec-CCceEEEEEecccC---cccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEEccCC
Q 002278 622 YIVGYGASSTVYKCALK-NSRPIAVKKLYNQY---PHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNG 697 (943)
Q Consensus 622 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 697 (943)
+.||+|+||.||+|..+ +++.||+|++.... ......+.+|++++++++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 36999999999999975 57899999986532 233456778999999999999999999999999999999999999
Q ss_pred ChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCCceee
Q 002278 698 SLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHAST 777 (943)
Q Consensus 698 ~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~ 777 (943)
+|.+++. ....+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...... ....
T Consensus 81 ~L~~~l~---~~~~~~~~~~~~~~~qi~~~L~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~-~~~~ 153 (323)
T cd05571 81 ELFFHLS---RERVFSEDRARFYGAEIVSALGYLHSC---DVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDG-ATMK 153 (323)
T ss_pred cHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCC-Cccc
Confidence 9999986 345689999999999999999999999 99999999999999999999999999997543222 2223
Q ss_pred eEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccccCccCHHHHH
Q 002278 778 FVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAVR 857 (943)
Q Consensus 778 ~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 857 (943)
...||+.|+|||++.+..++.++||||+||++|||+||+.||..................++. .+ ..
T Consensus 154 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~p~----~~---------~~ 220 (323)
T cd05571 154 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR----TL---------SP 220 (323)
T ss_pred ceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCCCCCC----CC---------CH
Confidence 456999999999999999999999999999999999999999865543332222222211111 11 24
Q ss_pred HHHHHHHHccCCCCCCCC-----CHHHHHHHHh
Q 002278 858 KTFQLALLCTKRYPSERP-----TMQEVARVLV 885 (943)
Q Consensus 858 ~l~~l~~~cl~~dP~~RP-----t~~el~~~L~ 885 (943)
.+.+++..|++.||++|| ++.++++|-+
T Consensus 221 ~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h~~ 253 (323)
T cd05571 221 EAKSLLAGLLKKDPKQRLGGGPEDAKEIMEHRF 253 (323)
T ss_pred HHHHHHHHHccCCHHHcCCCCCCCHHHHHcCCC
Confidence 567899999999999999 8999988743
No 40
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.8e-39 Score=350.78 Aligned_cols=260 Identities=27% Similarity=0.375 Sum_probs=210.8
Q ss_pred ccccceEEeeeceEEEEEEEecCC-----ceEEEEEeccc---CcccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcce
Q 002278 617 NLSEKYIVGYGASSTVYKCALKNS-----RPIAVKKLYNQ---YPHNLREFETELETIGSIRHRNIVSLHGYALSPYGNL 688 (943)
Q Consensus 617 ~~~~~~~lG~G~~g~Vy~~~~~~~-----~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 688 (943)
+....+.||+|+||.||+|+.+.. ..||||..+.. ......++.+|+++|+.++|||||++||++......+
T Consensus 158 ~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl~ 237 (474)
T KOG0194|consen 158 DIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPLM 237 (474)
T ss_pred CccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCccE
Confidence 334457899999999999997642 22899988752 2456678999999999999999999999999999999
Q ss_pred EEEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeeccccccccc
Q 002278 689 LFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCI 768 (943)
Q Consensus 689 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~ 768 (943)
+|||+|.||+|.++|+.. ...++..+...++.++|.||+|||++ +++||||.++|+|++.++.+||+|||+++.-
T Consensus 238 ivmEl~~gGsL~~~L~k~--~~~v~~~ek~~~~~~AA~Gl~YLh~k---~~IHRDIAARNcL~~~~~~vKISDFGLs~~~ 312 (474)
T KOG0194|consen 238 LVMELCNGGSLDDYLKKN--KKSLPTLEKLRFCYDAARGLEYLHSK---NCIHRDIAARNCLYSKKGVVKISDFGLSRAG 312 (474)
T ss_pred EEEEecCCCcHHHHHHhC--CCCCCHHHHHHHHHHHHhHHHHHHHC---CCcchhHhHHHheecCCCeEEeCccccccCC
Confidence 999999999999999742 33699999999999999999999999 9999999999999999999999999998754
Q ss_pred CCCCCceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCccHHHHHHHhccccccccccCcccc
Q 002278 769 PTAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKADDNTVMEAVDPEVS 847 (943)
Q Consensus 769 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 847 (943)
....... ....-+.+|+|||.+....++.++|||||||++||+++ |..||.+.........+.......... +
T Consensus 313 ~~~~~~~-~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~~~~r~~~~--~--- 386 (474)
T KOG0194|consen 313 SQYVMKK-FLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIVKNGYRMPIP--S--- 386 (474)
T ss_pred cceeecc-ccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHHhcCccCCCC--C---
Confidence 3111111 01124689999999999999999999999999999999 899999887665444442322221111 0
Q ss_pred cCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcCCCCCC
Q 002278 848 VTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLVSLLPAPPA 893 (943)
Q Consensus 848 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~~~~~~~~ 893 (943)
..+..+..++..||..+|++||+|.++.+.++.+......
T Consensus 387 ------~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~~ 426 (474)
T KOG0194|consen 387 ------KTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKKEA 426 (474)
T ss_pred ------CCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhcccc
Confidence 2235677889999999999999999999999887765443
No 41
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=2e-38 Score=350.46 Aligned_cols=248 Identities=19% Similarity=0.242 Sum_probs=206.8
Q ss_pred hhccccceEEeeeceEEEEEEEec-CCceEEEEEecccC---cccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEE
Q 002278 615 TENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQY---PHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLF 690 (943)
Q Consensus 615 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 690 (943)
.++|+..+.||+|+||.||+|+++ +++.||+|.+.... ....+.+.+|+++++.++||||+++++++.+++..++|
T Consensus 17 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 96 (329)
T PTZ00263 17 LSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFL 96 (329)
T ss_pred chheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEE
Confidence 357889999999999999999986 57889999986432 23345688999999999999999999999999999999
Q ss_pred EEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCC
Q 002278 691 YDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPT 770 (943)
Q Consensus 691 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~ 770 (943)
|||+++|+|.+++. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 97 ~e~~~~~~L~~~l~---~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 170 (329)
T PTZ00263 97 LEFVVGGELFTHLR---KAGRFPNDVAKFYHAELVLAFEYLHSK---DIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPD 170 (329)
T ss_pred EcCCCCChHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEECCCCCEEEeeccCceEcCC
Confidence 99999999999986 345688999999999999999999999 999999999999999999999999999987643
Q ss_pred CCCceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccccCc
Q 002278 771 AMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTC 850 (943)
Q Consensus 771 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 850 (943)
.. ....||+.|+|||++.+..++.++|||||||++|||++|+.||.+.................+.. +
T Consensus 171 ~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~----~---- 238 (329)
T PTZ00263 171 RT----FTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAGRLKFPNW----F---- 238 (329)
T ss_pred Cc----ceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCcCCCCC----C----
Confidence 22 23469999999999999999999999999999999999999998766544333332221111111 1
Q ss_pred cCHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHHHHh
Q 002278 851 VDLSAVRKTFQLALLCTKRYPSERPT-----MQEVARVLV 885 (943)
Q Consensus 851 ~~~~~~~~l~~l~~~cl~~dP~~RPt-----~~el~~~L~ 885 (943)
...+.+++..||+.||++||+ ++++++|-+
T Consensus 239 -----~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~hp~ 273 (329)
T PTZ00263 239 -----DGRARDLVKGLLQTDHTKRLGTLKGGVADVKNHPY 273 (329)
T ss_pred -----CHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCc
Confidence 135678999999999999996 788888754
No 42
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-39 Score=345.40 Aligned_cols=241 Identities=26% Similarity=0.415 Sum_probs=199.7
Q ss_pred cceEEeeeceEEEEEEEecCCceEEEEEecccCcccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEEccCCCh
Q 002278 620 EKYIVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSL 699 (943)
Q Consensus 620 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 699 (943)
..+-+|.|+.|.||.|+++ ++.|||||+... -+.+++-|++++||||+.+.|+|.....++||||||..|-|
T Consensus 128 ELeWlGSGaQGAVF~Grl~-netVAVKKV~el-------kETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~GqL 199 (904)
T KOG4721|consen 128 ELEWLGSGAQGAVFLGRLH-NETVAVKKVREL-------KETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQGQL 199 (904)
T ss_pred hhhhhccCcccceeeeecc-CceehhHHHhhh-------hhhhHHHHHhccCcceeeEeeeecCCceeEEeeeccccccH
Confidence 4456999999999999988 678999998543 24578889999999999999999999999999999999999
Q ss_pred hhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCCceeeeE
Q 002278 700 WDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFV 779 (943)
Q Consensus 700 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~~ 779 (943)
..+|+ ...++.......+..+||.|+.|||.+ .|||||||.-|||+..+..|||+|||-++..... .. ...+
T Consensus 200 ~~VLk---a~~~itp~llv~Wsk~IA~GM~YLH~h---KIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~-ST-kMSF 271 (904)
T KOG4721|consen 200 YEVLK---AGRPITPSLLVDWSKGIAGGMNYLHLH---KIIHRDLKSPNILISYDDVVKISDFGTSKELSDK-ST-KMSF 271 (904)
T ss_pred HHHHh---ccCccCHHHHHHHHHHhhhhhHHHHHh---hHhhhccCCCceEeeccceEEeccccchHhhhhh-hh-hhhh
Confidence 99997 455688888999999999999999999 9999999999999999999999999999876544 22 2335
Q ss_pred ecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccccCccCHHHHHHH
Q 002278 780 LGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAVRKT 859 (943)
Q Consensus 780 ~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 859 (943)
+||..|||||++...+.++|+||||||||||||+||..||.+.+.... +...+. ..+.-.++. .++..+
T Consensus 272 aGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAI----IwGVGs--NsL~LpvPs-----tcP~Gf 340 (904)
T KOG4721|consen 272 AGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAI----IWGVGS--NSLHLPVPS-----TCPDGF 340 (904)
T ss_pred hhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchhee----EEeccC--CcccccCcc-----cCchHH
Confidence 699999999999999999999999999999999999999986544321 111111 111111222 223456
Q ss_pred HHHHHHccCCCCCCCCCHHHHHHHHhhc
Q 002278 860 FQLALLCTKRYPSERPTMQEVARVLVSL 887 (943)
Q Consensus 860 ~~l~~~cl~~dP~~RPt~~el~~~L~~~ 887 (943)
.-+++.||+..|..||++.+++.|+.-.
T Consensus 341 klL~Kqcw~sKpRNRPSFrqil~HldIa 368 (904)
T KOG4721|consen 341 KLLLKQCWNSKPRNRPSFRQILLHLDIA 368 (904)
T ss_pred HHHHHHHHhcCCCCCccHHHHHHHHhhc
Confidence 6789999999999999999999999743
No 43
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-38 Score=346.64 Aligned_cols=249 Identities=18% Similarity=0.276 Sum_probs=208.2
Q ss_pred HhhccccceEEeeeceEEEEEEEec-CCceEEEEEecccC---cccHHHHHHHHHHHhcC-CCCCcceeeeEEecCCcce
Q 002278 614 STENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQY---PHNLREFETELETIGSI-RHRNIVSLHGYALSPYGNL 688 (943)
Q Consensus 614 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 688 (943)
..++|...++||+|.||+|++|..+ +++.+|||.+++.. .+..+....|.+++... +||.++.++..|+..++.|
T Consensus 366 ~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~ 445 (694)
T KOG0694|consen 366 TLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLF 445 (694)
T ss_pred cccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEE
Confidence 4578999999999999999999987 46788999998764 45567788888888777 5999999999999999999
Q ss_pred EEEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeeccccccccc
Q 002278 689 LFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCI 768 (943)
Q Consensus 689 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~ 768 (943)
+||||+.||++..+. ....+++..+.-+|..|+.||+|||++ +|||||||-+|||+|.+|++||+|||+++.-
T Consensus 446 fvmey~~Ggdm~~~~----~~~~F~e~rarfyaAev~l~L~fLH~~---~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~ 518 (694)
T KOG0694|consen 446 FVMEYVAGGDLMHHI----HTDVFSEPRARFYAAEVVLGLQFLHEN---GIIYRDLKLDNLLLDTEGHVKIADFGLCKEG 518 (694)
T ss_pred EEEEecCCCcEEEEE----ecccccHHHHHHHHHHHHHHHHHHHhc---CceeeecchhheEEcccCcEEeccccccccc
Confidence 999999999955544 346799999999999999999999999 9999999999999999999999999999864
Q ss_pred CCCCCceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCccccc
Q 002278 769 PTAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSV 848 (943)
Q Consensus 769 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 848 (943)
-.. ...+++.+|||.|||||++.+..|+.++|.|||||+||||+.|+.||.+++.-+....+...+...+..+
T Consensus 519 m~~-g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~d~~~yP~~l------ 591 (694)
T KOG0694|consen 519 MGQ-GDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFL------ 591 (694)
T ss_pred CCC-CCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCCCCCCcc------
Confidence 322 2345567899999999999999999999999999999999999999998776555544444333322222
Q ss_pred CccCHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHHH
Q 002278 849 TCVDLSAVRKTFQLALLCTKRYPSERPT-----MQEVARV 883 (943)
Q Consensus 849 ~~~~~~~~~~l~~l~~~cl~~dP~~RPt-----~~el~~~ 883 (943)
..+...++++++.++|++|-- +.+|.+|
T Consensus 592 -------s~ea~~il~~ll~k~p~kRLG~~e~d~~~i~~h 624 (694)
T KOG0694|consen 592 -------SKEAIAIMRRLLRKNPEKRLGSGERDAEDIKKH 624 (694)
T ss_pred -------cHHHHHHHHHHhccCcccccCCCCCCchhhhhC
Confidence 245668999999999999984 4555543
No 44
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3.9e-39 Score=345.60 Aligned_cols=252 Identities=25% Similarity=0.317 Sum_probs=214.8
Q ss_pred hhccccceEEeeeceEEEEEEEec-CCceEEEEEecccC--cccHHHHHHHHHHHhcCCCCCcceeeeEEecCCc-ceEE
Q 002278 615 TENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQY--PHNLREFETELETIGSIRHRNIVSLHGYALSPYG-NLLF 690 (943)
Q Consensus 615 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-~~lv 690 (943)
.++|...+++|+|+||.++.++++ +++.||+|++.-.. ....+...+|+.++++++|||||.+.+.|.+++. .+||
T Consensus 3 m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Iv 82 (426)
T KOG0589|consen 3 MDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIV 82 (426)
T ss_pred cchhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEE
Confidence 467888999999999999999977 57889999986443 3344567899999999999999999999999988 8999
Q ss_pred EEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCC
Q 002278 691 YDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPT 770 (943)
Q Consensus 691 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~ 770 (943)
|+|++||++.+.+...+ ...++++.+..++.|++.|+.|||+. +|+|||||+.||+++.++.|||+|||+|+.+..
T Consensus 83 m~Y~eGg~l~~~i~~~k-~~~f~E~~i~~~~~Q~~~av~ylH~~---~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~ 158 (426)
T KOG0589|consen 83 MEYCEGGDLAQLIKEQK-GVLFPEERILKWFVQILLAVNYLHEN---RVLHRDLKCANIFLTKDKKVKLGDFGLAKILNP 158 (426)
T ss_pred EeecCCCCHHHHHHHHh-hccccHHHHHHHHHHHHHHHHHHHhh---hhhcccchhhhhhccccCceeecchhhhhhcCC
Confidence 99999999999997543 45799999999999999999999998 999999999999999999999999999999877
Q ss_pred CCCceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccccCc
Q 002278 771 AMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTC 850 (943)
Q Consensus 771 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 850 (943)
...... .++||+.||.||.+.+.+|+.|+||||+||++|||++-+++|...+...-...+...... .+..
T Consensus 159 ~~~~a~-tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~~~---Plp~------ 228 (426)
T KOG0589|consen 159 EDSLAS-TVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRGLYS---PLPS------ 228 (426)
T ss_pred chhhhh-eecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHHHHHHhhccCC---CCCc------
Confidence 653433 467999999999999999999999999999999999999999877665554444443311 1111
Q ss_pred cCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002278 851 VDLSAVRKTFQLALLCTKRYPSERPTMQEVARV 883 (943)
Q Consensus 851 ~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~ 883 (943)
.....+..+++.|++.+|..||++.+++.+
T Consensus 229 ---~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 229 ---MYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred ---cccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 122467789999999999999999999986
No 45
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=1.4e-38 Score=345.65 Aligned_cols=247 Identities=21% Similarity=0.230 Sum_probs=205.7
Q ss_pred hccccceEEeeeceEEEEEEEec-CCceEEEEEecccC---cccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEE
Q 002278 616 ENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQY---PHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFY 691 (943)
Q Consensus 616 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 691 (943)
++|+..+.||+|+||.||+|..+ +++.||+|++.... ....+.+.+|+++++.++||||+++++++.+....++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM 80 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence 36888899999999999999976 57899999985432 233456889999999999999999999999999999999
Q ss_pred EEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCC
Q 002278 692 DYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTA 771 (943)
Q Consensus 692 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~ 771 (943)
||+++|+|.+++. ....+++..+..++.|++.||+|||++ +|+||||||+||++++++.+||+|||+++.....
T Consensus 81 e~~~~~~L~~~~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~ 154 (291)
T cd05612 81 EYVPGGELFSYLR---NSGRFSNSTGLFYASEIVCALEYLHSK---EIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDR 154 (291)
T ss_pred eCCCCCCHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEEecCcchhccCC
Confidence 9999999999986 345689999999999999999999999 9999999999999999999999999999866432
Q ss_pred CCceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccccCcc
Q 002278 772 MPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCV 851 (943)
Q Consensus 772 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 851 (943)
. ....|++.|+|||++.+..++.++|||||||++|||++|+.||.+................++.. +
T Consensus 155 ~----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~----~----- 221 (291)
T cd05612 155 T----WTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAGKLEFPRH----L----- 221 (291)
T ss_pred c----ccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcCCCcc----C-----
Confidence 1 23458999999999999999999999999999999999999998765544333322222111111 1
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHHHHh
Q 002278 852 DLSAVRKTFQLALLCTKRYPSERPT-----MQEVARVLV 885 (943)
Q Consensus 852 ~~~~~~~l~~l~~~cl~~dP~~RPt-----~~el~~~L~ 885 (943)
...+.+++++|++.||.+||+ +.++++|-+
T Consensus 222 ----~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~ 256 (291)
T cd05612 222 ----DLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHRW 256 (291)
T ss_pred ----CHHHHHHHHHHcCCCHHHccCCccCCHHHHhcCcc
Confidence 135678999999999999995 999998865
No 46
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=5.1e-38 Score=340.37 Aligned_cols=253 Identities=21% Similarity=0.262 Sum_probs=201.4
Q ss_pred cccceEEeeeceEEEEEEEec-CCceEEEEEecccC---cccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEE
Q 002278 618 LSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQY---PHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDY 693 (943)
Q Consensus 618 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 693 (943)
|+..+.||+|+||+||+|... +++.||+|++.... ......+.+|+++++.++|++|+++++++.+++..++||||
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEe
Confidence 677889999999999999975 68899999886432 22334577899999999999999999999999999999999
Q ss_pred ccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCC
Q 002278 694 MVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMP 773 (943)
Q Consensus 694 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~ 773 (943)
+++|+|.+++... ....+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++.......
T Consensus 82 ~~~g~L~~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~ 157 (285)
T cd05631 82 MNGGDLKFHIYNM-GNPGFDEQRAIFYAAELCCGLEDLQRE---RIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGET 157 (285)
T ss_pred cCCCcHHHHHHhh-CCCCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCCe
Confidence 9999998887532 233589999999999999999999999 999999999999999999999999999987643221
Q ss_pred ceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccccCccCH
Q 002278 774 HASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDL 853 (943)
Q Consensus 774 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 853 (943)
.....||..|+|||++.+..++.++||||+||++|||++|+.||..........................+
T Consensus 158 --~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 228 (285)
T cd05631 158 --VRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKEDQEEYSEKF------- 228 (285)
T ss_pred --ecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhcccccCCccC-------
Confidence 22345899999999999999999999999999999999999999865432111111100000011111111
Q ss_pred HHHHHHHHHHHHccCCCCCCCCC-----HHHHHHHHh
Q 002278 854 SAVRKTFQLALLCTKRYPSERPT-----MQEVARVLV 885 (943)
Q Consensus 854 ~~~~~l~~l~~~cl~~dP~~RPt-----~~el~~~L~ 885 (943)
...+.+++..||+.||++||+ ++++++|-+
T Consensus 229 --s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h~~ 263 (285)
T cd05631 229 --SEDAKSICRMLLTKNPKERLGCRGNGAAGVKQHPI 263 (285)
T ss_pred --CHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcCHh
Confidence 245678999999999999997 888888743
No 47
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.5e-39 Score=314.18 Aligned_cols=261 Identities=25% Similarity=0.337 Sum_probs=219.4
Q ss_pred HHHHHHhhccccceEEeeeceEEEEEEEec-CCceEEEEEecccC----cc----cHHHHHHHHHHHhcC-CCCCcceee
Q 002278 609 DDIMRSTENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQY----PH----NLREFETELETIGSI-RHRNIVSLH 678 (943)
Q Consensus 609 ~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~----~~~~~~~E~~~l~~l-~h~niv~l~ 678 (943)
++-......|...+.+|.|..++|.++.++ .|+++|+|++.... .+ ..++..+|+.+++++ .||+|+++.
T Consensus 10 ~aa~~fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~ 89 (411)
T KOG0599|consen 10 DAAKGFYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQ 89 (411)
T ss_pred hhHhhHHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEee
Confidence 334455677888899999999999999876 57889999885332 11 234456899999998 599999999
Q ss_pred eEEecCCcceEEEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCcee
Q 002278 679 GYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAH 758 (943)
Q Consensus 679 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~k 758 (943)
++++.+...++|+|.|+.|.|.|++. ....+++....+|+.|+.+|++|||.+ +||||||||+|||++++.++|
T Consensus 90 D~yes~sF~FlVFdl~prGELFDyLt---s~VtlSEK~tR~iMrqlfegVeylHa~---~IVHRDLKpENILlddn~~i~ 163 (411)
T KOG0599|consen 90 DVYESDAFVFLVFDLMPRGELFDYLT---SKVTLSEKETRRIMRQLFEGVEYLHAR---NIVHRDLKPENILLDDNMNIK 163 (411)
T ss_pred eeccCcchhhhhhhhcccchHHHHhh---hheeecHHHHHHHHHHHHHHHHHHHHh---hhhhcccChhheeeccccceE
Confidence 99999999999999999999999996 567899999999999999999999999 999999999999999999999
Q ss_pred ecccccccccCCCCCceeeeEecccceeCccccc------cCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHh
Q 002278 759 LSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAH------TSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSK 832 (943)
Q Consensus 759 l~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~ 832 (943)
|+|||+|+.++.+. .-...+|||+|.|||.+. ...|+..+|+||.||+||.++.|.+||.....+..+..+.
T Consensus 164 isDFGFa~~l~~Ge--kLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~Im 241 (411)
T KOG0599|consen 164 ISDFGFACQLEPGE--KLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIM 241 (411)
T ss_pred EeccceeeccCCch--hHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHH
Confidence 99999999887653 234578999999999875 3468899999999999999999999999877766666666
Q ss_pred ccccccccccCcccccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhh
Q 002278 833 ADDNTVMEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLVS 886 (943)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~ 886 (943)
.+...+...-+.+++ ...-+++.+|++.||.+|.|++|+++|-+-
T Consensus 242 eGkyqF~speWadis---------~~~KdLIsrlLqVdp~~Ritake~LaHpff 286 (411)
T KOG0599|consen 242 EGKYQFRSPEWADIS---------ATVKDLISRLLQVDPTKRITAKEALAHPFF 286 (411)
T ss_pred hcccccCCcchhhcc---------ccHHHHHHHHHeeCchhcccHHHHhcChHH
Confidence 666655555444444 234579999999999999999999998654
No 48
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=1.3e-37 Score=336.19 Aligned_cols=247 Identities=19% Similarity=0.328 Sum_probs=200.1
Q ss_pred ceEEeeeceEEEEEEEecCCceEEEEEecccCccc---HHHHHHHHHHHhcCCCCCcceeeeEEec----CCcceEEEEE
Q 002278 621 KYIVGYGASSTVYKCALKNSRPIAVKKLYNQYPHN---LREFETELETIGSIRHRNIVSLHGYALS----PYGNLLFYDY 693 (943)
Q Consensus 621 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~lv~e~ 693 (943)
...||+|++|.||+|.. +++.||||++....... .+.+.+|++++++++|||||++++++.+ ....++||||
T Consensus 25 ~~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey 103 (283)
T PHA02988 25 SVLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEY 103 (283)
T ss_pred CeEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEe
Confidence 36799999999999998 48899999987654333 4677899999999999999999999876 3467899999
Q ss_pred ccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCC
Q 002278 694 MVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMP 773 (943)
Q Consensus 694 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~ 773 (943)
+++|+|.+++.. ...+++.....++.+++.|++|||+.. +++||||||+||++++++.+||+|||+++.+....
T Consensus 104 ~~~g~L~~~l~~---~~~~~~~~~~~i~~~i~~~l~~lH~~~--~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~- 177 (283)
T PHA02988 104 CTRGYLREVLDK---EKDLSFKTKLDMAIDCCKGLYNLYKYT--NKPYKNLTSVSFLVTENYKLKIICHGLEKILSSPP- 177 (283)
T ss_pred CCCCcHHHHHhh---CCCCChhHHHHHHHHHHHHHHHHHhcC--CCCCCcCChhhEEECCCCcEEEcccchHhhhcccc-
Confidence 999999999973 356899999999999999999999732 78899999999999999999999999998654321
Q ss_pred ceeeeEecccceeCcccccc--CCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccccCcc
Q 002278 774 HASTFVLGTIGYIDPEYAHT--SRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCV 851 (943)
Q Consensus 774 ~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 851 (943)
....|+..|+|||++.+ ..++.++|||||||++|||++|+.||.+................ +.++.
T Consensus 178 ---~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i~~~~~~------~~~~~--- 245 (283)
T PHA02988 178 ---FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLIINKNNS------LKLPL--- 245 (283)
T ss_pred ---ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCC------CCCCC---
Confidence 12358899999999876 67999999999999999999999999876543332222211111 11111
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcC
Q 002278 852 DLSAVRKTFQLALLCTKRYPSERPTMQEVARVLVSLL 888 (943)
Q Consensus 852 ~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~~~ 888 (943)
.....+.+++.+||+.||++|||++++++.|+.+.
T Consensus 246 --~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~ 280 (283)
T PHA02988 246 --DCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYK 280 (283)
T ss_pred --cCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHH
Confidence 12246778999999999999999999999987653
No 49
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=8.1e-39 Score=326.03 Aligned_cols=250 Identities=20% Similarity=0.319 Sum_probs=211.4
Q ss_pred hhccccceEEeeeceEEEEEEEe-cCCceEEEEEecccCcccHH---HHHHHHHHHhcCCCCCcceeeeEEecCCcceEE
Q 002278 615 TENLSEKYIVGYGASSTVYKCAL-KNSRPIAVKKLYNQYPHNLR---EFETELETIGSIRHRNIVSLHGYALSPYGNLLF 690 (943)
Q Consensus 615 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~---~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 690 (943)
..+|++.+.||+|.||.|-+|.. +.|+.||||.+.+..-.+.+ .+++|+++|+.++||||+.+|.+|+..+...||
T Consensus 52 kHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIviv 131 (668)
T KOG0611|consen 52 KHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIV 131 (668)
T ss_pred hhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEE
Confidence 45778888899999999999985 67999999999766544433 578999999999999999999999999999999
Q ss_pred EEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCC
Q 002278 691 YDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPT 770 (943)
Q Consensus 691 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~ 770 (943)
|||..+|.|+|++. ..+.+++.++..+++||..|+.|+|.+ ++||||||.+|||+|.++.+||+|||++..+..
T Consensus 132 MEYaS~GeLYDYiS---er~~LsErEaRhfFRQIvSAVhYCHkn---rVvHRDLKLENILLD~N~NiKIADFGLSNly~~ 205 (668)
T KOG0611|consen 132 MEYASGGELYDYIS---ERGSLSEREARHFFRQIVSAVHYCHKN---RVVHRDLKLENILLDQNNNIKIADFGLSNLYAD 205 (668)
T ss_pred EEecCCccHHHHHH---HhccccHHHHHHHHHHHHHHHHHHhhc---cceecccchhheeecCCCCeeeeccchhhhhcc
Confidence 99999999999997 456799999999999999999999999 999999999999999999999999999988765
Q ss_pred CCCceeeeEecccceeCccccccCCCC-CcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccccC
Q 002278 771 AMPHASTFVLGTIGYIDPEYAHTSRLN-EKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVT 849 (943)
Q Consensus 771 ~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 849 (943)
.. .-+.++|++-|.+||+..|.+|. +.+|.||+||+||.++.|..||++.+.......+... ...+ |.-+
T Consensus 206 ~k--fLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~G--aYrE---P~~P-- 276 (668)
T KOG0611|consen 206 KK--FLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISRG--AYRE---PETP-- 276 (668)
T ss_pred cc--HHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhhcc--cccC---CCCC--
Confidence 43 33457899999999999998875 7899999999999999999999987643332222222 2222 2222
Q ss_pred ccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhh
Q 002278 850 CVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLVS 886 (943)
Q Consensus 850 ~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~ 886 (943)
....-+|++|+-.+|++|.|..++..|-|-
T Consensus 277 -------SdA~gLIRwmLmVNP~RRATieDiAsHWWv 306 (668)
T KOG0611|consen 277 -------SDASGLIRWMLMVNPERRATIEDIASHWWV 306 (668)
T ss_pred -------chHHHHHHHHHhcCcccchhHHHHhhhhee
Confidence 123468999999999999999999998763
No 50
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=4e-38 Score=342.00 Aligned_cols=262 Identities=23% Similarity=0.231 Sum_probs=206.4
Q ss_pred hccccceEEeeeceEEEEEEEec-CCceEEEEEecccC--cccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEE
Q 002278 616 ENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQY--PHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYD 692 (943)
Q Consensus 616 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 692 (943)
++|+..+.||+|+||+||+|+++ +++.||+|++.... ....+.+.+|+++++.++||||+++++++..++..++|||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFE 80 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEe
Confidence 36888999999999999999987 46789999886542 3345678899999999999999999999999999999999
Q ss_pred EccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCC
Q 002278 693 YMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAM 772 (943)
Q Consensus 693 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~ 772 (943)
|++++.+..+.. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 81 ~~~~~~l~~~~~---~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 154 (287)
T cd07848 81 YVEKNMLELLEE---MPNGVPPEKVRSYIYQLIKAIHWCHKN---DIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGS 154 (287)
T ss_pred cCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccCcccccccc
Confidence 999887765543 234689999999999999999999999 99999999999999999999999999998765433
Q ss_pred CceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhcccccccc------------
Q 002278 773 PHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVME------------ 840 (943)
Q Consensus 773 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~------------ 840 (943)
........|++.|+|||++.+..++.++||||+||++|||++|+.||................++...
T Consensus 155 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (287)
T cd07848 155 NANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRF 234 (287)
T ss_pred cccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchh
Confidence 33333456899999999999988999999999999999999999999876554443332221111110
Q ss_pred --ccCcccccCcc-----CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002278 841 --AVDPEVSVTCV-----DLSAVRKTFQLALLCTKRYPSERPTMQEVARV 883 (943)
Q Consensus 841 --~~~~~~~~~~~-----~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~ 883 (943)
...+....... .......+.+++++|++.||++|||++++++|
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~h 284 (287)
T cd07848 235 HGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNH 284 (287)
T ss_pred cccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 00010000000 00122467899999999999999999999876
No 51
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=7.4e-38 Score=342.67 Aligned_cols=254 Identities=21% Similarity=0.297 Sum_probs=223.4
Q ss_pred HhhccccceEEeeeceEEEEEEEecC-CceEEEEEecccCcc---cHHHHHHHHHHHhcCC-CCCcceeeeEEecCCcce
Q 002278 614 STENLSEKYIVGYGASSTVYKCALKN-SRPIAVKKLYNQYPH---NLREFETELETIGSIR-HRNIVSLHGYALSPYGNL 688 (943)
Q Consensus 614 ~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~ 688 (943)
....|+..+.||+|.||.||+|+.+. |+.+|+|.+.+.... ....+.+|+++|+++. |||||.++++|++....+
T Consensus 33 ~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~ 112 (382)
T KOG0032|consen 33 IKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVY 112 (382)
T ss_pred ccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEE
Confidence 34578888999999999999999875 899999999766543 3468999999999998 999999999999999999
Q ss_pred EEEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECC----CCceeeccccc
Q 002278 689 LFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDE----NFDAHLSDFGI 764 (943)
Q Consensus 689 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~----~~~~kl~DFGl 764 (943)
+|||++.||.|.+.+... .+++.++..++.|++.|++|||+. ||+|||+||+|+|+.. ++.+|++|||+
T Consensus 113 lvmEL~~GGeLfd~i~~~----~~sE~da~~~~~~il~av~~lH~~---gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGl 185 (382)
T KOG0032|consen 113 LVMELCEGGELFDRIVKK----HYSERDAAGIIRQILEAVKYLHSL---GVVHRDLKPENLLLASKDEGSGRIKLIDFGL 185 (382)
T ss_pred EEEEecCCchHHHHHHHc----cCCHHHHHHHHHHHHHHHHHHHhC---CceeccCCHHHeeeccccCCCCcEEEeeCCC
Confidence 999999999999998643 399999999999999999999998 9999999999999963 35799999999
Q ss_pred ccccCCCCCceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCc
Q 002278 765 ARCIPTAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDP 844 (943)
Q Consensus 765 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 844 (943)
|..... .......+||+.|+|||+..+..|+.++||||+||++|.|++|.+||.+.........+......+....++
T Consensus 186 a~~~~~--~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~~f~~~~w~ 263 (382)
T KOG0032|consen 186 AKFIKP--GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGDFDFTSEPWD 263 (382)
T ss_pred ceEccC--CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCCCCCCCCcc
Confidence 998876 445566789999999999999999999999999999999999999999988777777666666656666555
Q ss_pred ccccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 002278 845 EVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLV 885 (943)
Q Consensus 845 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~ 885 (943)
.+. ...-++++.++..||.+|+|+.++++|.|
T Consensus 264 ~is---------~~akd~i~~ll~~dp~~R~ta~~~L~HpW 295 (382)
T KOG0032|consen 264 DIS---------ESAKDFIRKLLEFDPRKRLTAAQALQHPW 295 (382)
T ss_pred ccC---------HHHHHHHHHhcccCcccCCCHHHHhcCcc
Confidence 554 34568999999999999999999999976
No 52
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=1e-37 Score=344.47 Aligned_cols=244 Identities=20% Similarity=0.260 Sum_probs=199.8
Q ss_pred eEEeeeceEEEEEEEec-CCceEEEEEecccC---cccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEEccCC
Q 002278 622 YIVGYGASSTVYKCALK-NSRPIAVKKLYNQY---PHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNG 697 (943)
Q Consensus 622 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 697 (943)
+.||+|+||.||+|..+ +++.||+|++.+.. ......+.+|+++++.++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 36999999999999976 57899999986542 234456788999999999999999999999999999999999999
Q ss_pred ChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCCceee
Q 002278 698 SLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHAST 777 (943)
Q Consensus 698 ~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~ 777 (943)
+|.+++. ....+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++....... ...
T Consensus 81 ~L~~~l~---~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~-~~~ 153 (328)
T cd05593 81 ELFFHLS---RERVFSEDRTRFYGAEIVSALDYLHSG---KIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAA-TMK 153 (328)
T ss_pred CHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeEECCCCcEEEecCcCCccCCCccc-ccc
Confidence 9999886 345689999999999999999999999 999999999999999999999999999875432211 223
Q ss_pred eEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccccCccCHHHHH
Q 002278 778 FVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAVR 857 (943)
Q Consensus 778 ~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 857 (943)
...||+.|+|||++.+..++.++||||+||++|||++|+.||..................++ +.+ ..
T Consensus 154 ~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~p----~~~---------~~ 220 (328)
T cd05593 154 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEDIKFP----RTL---------SA 220 (328)
T ss_pred cccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhccCCccCC----CCC---------CH
Confidence 35699999999999999999999999999999999999999986554333222222111111 111 14
Q ss_pred HHHHHHHHccCCCCCCCC-----CHHHHHHHHh
Q 002278 858 KTFQLALLCTKRYPSERP-----TMQEVARVLV 885 (943)
Q Consensus 858 ~l~~l~~~cl~~dP~~RP-----t~~el~~~L~ 885 (943)
.+.+++.+|+..||++|| ++.++++|-+
T Consensus 221 ~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~ 253 (328)
T cd05593 221 DAKSLLSGLLIKDPNKRLGGGPDDAKEIMRHSF 253 (328)
T ss_pred HHHHHHHHHcCCCHHHcCCCCCCCHHHHhcCCC
Confidence 567899999999999997 8999998743
No 53
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=3.5e-38 Score=349.12 Aligned_cols=248 Identities=21% Similarity=0.234 Sum_probs=206.1
Q ss_pred hhccccceEEeeeceEEEEEEEecC--CceEEEEEecccC---cccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceE
Q 002278 615 TENLSEKYIVGYGASSTVYKCALKN--SRPIAVKKLYNQY---PHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLL 689 (943)
Q Consensus 615 ~~~~~~~~~lG~G~~g~Vy~~~~~~--~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 689 (943)
.++|+..+.||+|+||.||+|.++. +..||+|++.... ....+.+.+|+++++.++||||+++++++.+.+..++
T Consensus 29 ~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~l 108 (340)
T PTZ00426 29 YEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYL 108 (340)
T ss_pred hhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEE
Confidence 4578899999999999999998653 3689999885432 2344568899999999999999999999999999999
Q ss_pred EEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccC
Q 002278 690 FYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIP 769 (943)
Q Consensus 690 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~ 769 (943)
||||+++|+|.+++. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 109 v~Ey~~~g~L~~~i~---~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~ 182 (340)
T PTZ00426 109 VLEFVIGGEFFTFLR---RNKRFPNDVGCFYAAQIVLIFEYLQSL---NIVYRDLKPENLLLDKDGFIKMTDFGFAKVVD 182 (340)
T ss_pred EEeCCCCCcHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEecCCCCeecC
Confidence 999999999999996 345689999999999999999999999 99999999999999999999999999998764
Q ss_pred CCCCceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccccC
Q 002278 770 TAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVT 849 (943)
Q Consensus 770 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 849 (943)
.. .....||+.|+|||++.+..++.++||||+||++|||++|+.||.+................++ +.+
T Consensus 183 ~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p----~~~--- 251 (340)
T PTZ00426 183 TR----TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEGIIYFP----KFL--- 251 (340)
T ss_pred CC----cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHhcCCCCCC----CCC---
Confidence 32 2235699999999999998899999999999999999999999987665443333332221111 111
Q ss_pred ccCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHHHh
Q 002278 850 CVDLSAVRKTFQLALLCTKRYPSERP-----TMQEVARVLV 885 (943)
Q Consensus 850 ~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~el~~~L~ 885 (943)
...+.+++++|++.||++|+ +++++++|.+
T Consensus 252 ------~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~hp~ 286 (340)
T PTZ00426 252 ------DNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHPW 286 (340)
T ss_pred ------CHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcCCC
Confidence 13456899999999999995 8999998854
No 54
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=5e-38 Score=322.63 Aligned_cols=264 Identities=24% Similarity=0.282 Sum_probs=215.5
Q ss_pred hhccccceEEeeeceEEEEEEEec-CCceEEEEEecccCcc--cHHHHHHHHHHHhcCCCCC-cceeeeEEecCC-----
Q 002278 615 TENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQYPH--NLREFETELETIGSIRHRN-IVSLHGYALSPY----- 685 (943)
Q Consensus 615 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~n-iv~l~~~~~~~~----- 685 (943)
...|...++||+|+||+||+|+.+ +|+.||+|++.-.... ......+|+.+++.++|+| ||++++++....
T Consensus 10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~ 89 (323)
T KOG0594|consen 10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGI 89 (323)
T ss_pred HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeeccccccc
Confidence 456677778999999999999976 6789999999655332 3345689999999999999 999999998877
Q ss_pred -cceEEEEEccCCChhhhccCCCCC-ccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccc
Q 002278 686 -GNLLFYDYMVNGSLWDLLHGPSKK-VKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFG 763 (943)
Q Consensus 686 -~~~lv~e~~~~g~L~~~l~~~~~~-~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFG 763 (943)
..++|+||+ .-+|.+++...... ..++...+..++.|++.||+|||++ +|+||||||+||+++++|.+||+|||
T Consensus 90 ~~l~lvfe~~-d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~---~IlHRDLKPQNlLi~~~G~lKlaDFG 165 (323)
T KOG0594|consen 90 GKLYLVFEFL-DRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSH---GILHRDLKPQNLLISSSGVLKLADFG 165 (323)
T ss_pred ceEEEEEEee-cccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCcceEEECCCCcEeeeccc
Confidence 678999998 56898888754322 3577789999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCceeeeEecccceeCccccccC-CCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhcccccccccc
Q 002278 764 IARCIPTAMPHASTFVLGTIGYIDPEYAHTS-RLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAV 842 (943)
Q Consensus 764 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 842 (943)
+|+...-.... .+..++|.+|+|||++.+. .|+...||||+||+++||+++++-|.+..+..++..+...-+...+..
T Consensus 166 lAra~~ip~~~-yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~ 244 (323)
T KOG0594|consen 166 LARAFSIPMRT-YTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKD 244 (323)
T ss_pred hHHHhcCCccc-ccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccC
Confidence 99966533222 3344589999999999886 799999999999999999999999999999888888877666665555
Q ss_pred CcccccC------ccCH-------H----HHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002278 843 DPEVSVT------CVDL-------S----AVRKTFQLALLCTKRYPSERPTMQEVARV 883 (943)
Q Consensus 843 ~~~~~~~------~~~~-------~----~~~~l~~l~~~cl~~dP~~RPt~~el~~~ 883 (943)
+|.+... +... . ......+++..|++.+|++|.|++.++.|
T Consensus 245 Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h 302 (323)
T KOG0594|consen 245 WPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTH 302 (323)
T ss_pred CCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcC
Confidence 5544211 0000 0 01356789999999999999999999987
No 55
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=8.5e-38 Score=344.54 Aligned_cols=244 Identities=19% Similarity=0.251 Sum_probs=199.6
Q ss_pred eEEeeeceEEEEEEEec-CCceEEEEEecccC---cccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEEccCC
Q 002278 622 YIVGYGASSTVYKCALK-NSRPIAVKKLYNQY---PHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNG 697 (943)
Q Consensus 622 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 697 (943)
+.||+|+||.||+|..+ +++.||+|++.... ......+.+|+++++.++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 36999999999999975 57899999986542 233456778999999999999999999999999999999999999
Q ss_pred ChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCCceee
Q 002278 698 SLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHAST 777 (943)
Q Consensus 698 ~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~ 777 (943)
+|.+++. ....+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++....... ...
T Consensus 81 ~L~~~l~---~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~-~~~ 153 (323)
T cd05595 81 ELFFHLS---RERVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA-TMK 153 (323)
T ss_pred cHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEEcCCCCEEecccHHhccccCCCC-ccc
Confidence 9998886 344689999999999999999999999 999999999999999999999999999875422211 122
Q ss_pred eEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccccCccCHHHHH
Q 002278 778 FVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAVR 857 (943)
Q Consensus 778 ~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 857 (943)
...||+.|+|||++.+..++.++|||||||++|||++|+.||...+..............++. .+ ..
T Consensus 154 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~p~----~~---------~~ 220 (323)
T cd05595 154 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TL---------SP 220 (323)
T ss_pred cccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCC----CC---------CH
Confidence 346899999999999999999999999999999999999999866544333332222221111 11 24
Q ss_pred HHHHHHHHccCCCCCCCC-----CHHHHHHHHh
Q 002278 858 KTFQLALLCTKRYPSERP-----TMQEVARVLV 885 (943)
Q Consensus 858 ~l~~l~~~cl~~dP~~RP-----t~~el~~~L~ 885 (943)
.+.+++..|+..||++|| ++.++++|-+
T Consensus 221 ~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h~~ 253 (323)
T cd05595 221 EAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRF 253 (323)
T ss_pred HHHHHHHHHccCCHHHhCCCCCCCHHHHHcCCC
Confidence 567899999999999998 8999988743
No 56
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=3e-39 Score=310.84 Aligned_cols=265 Identities=23% Similarity=0.306 Sum_probs=210.1
Q ss_pred HHhhccccceEEeeeceEEEEEEE-ecCCceEEEEEecccCcccHHHHHHHHHHHhcCCCCCcceeeeEEecCC-----c
Q 002278 613 RSTENLSEKYIVGYGASSTVYKCA-LKNSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYALSPY-----G 686 (943)
Q Consensus 613 ~~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~ 686 (943)
...++|.+.+.+|+|||+-||.++ ..+++.||+|++.....+..+...+|++..++++||||++++++...+. .
T Consensus 18 In~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~ 97 (302)
T KOG2345|consen 18 INNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHE 97 (302)
T ss_pred EcCceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCcee
Confidence 456789999999999999999998 4568899999998877778888999999999999999999999875433 4
Q ss_pred ceEEEEEccCCChhhhccCCCCCc-cCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccc
Q 002278 687 NLLFYDYMVNGSLWDLLHGPSKKV-KLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIA 765 (943)
Q Consensus 687 ~~lv~e~~~~g~L~~~l~~~~~~~-~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla 765 (943)
.|++++|...|+|.+.+.....++ .+++.+++.|+.++++||++||+. .|+++||||||.||++.+.+.+++.|||.+
T Consensus 98 ~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~-~~~yAH~DiKP~NILls~~~~~vl~D~GS~ 176 (302)
T KOG2345|consen 98 AYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEK-EPPYAHRDIKPANILLSDSGLPVLMDLGSA 176 (302)
T ss_pred EEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhcc-CCcccccCCCcceeEecCCCceEEEeccCc
Confidence 899999999999999987654444 799999999999999999999998 445999999999999999999999999999
Q ss_pred cccCCCCCc--------eeeeEecccceeCcccccc---CCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhcc
Q 002278 766 RCIPTAMPH--------ASTFVLGTIGYIDPEYAHT---SRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKAD 834 (943)
Q Consensus 766 ~~~~~~~~~--------~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~ 834 (943)
+...-.-.. ....-..|..|+|||.+.- ...++++|||||||++|+|+.|..||+.. ...
T Consensus 177 ~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~---------~~~ 247 (302)
T KOG2345|consen 177 TQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERI---------YQQ 247 (302)
T ss_pred cccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHH---------hhc
Confidence 765321100 0011236889999998863 45789999999999999999999999631 111
Q ss_pred ccc-cccccCcccccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcC
Q 002278 835 DNT-VMEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLVSLL 888 (943)
Q Consensus 835 ~~~-~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~~~ 888 (943)
.+. ......+.+..+... ...+.+.++++.|++.||.+||++.+++.++..+.
T Consensus 248 GgSlaLAv~n~q~s~P~~~-~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~Li 301 (302)
T KOG2345|consen 248 GGSLALAVQNAQISIPNSS-RYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDLI 301 (302)
T ss_pred CCeEEEeeeccccccCCCC-CccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhhc
Confidence 111 112222222211111 13467889999999999999999999999987653
No 57
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-38 Score=330.23 Aligned_cols=260 Identities=20% Similarity=0.250 Sum_probs=208.6
Q ss_pred HHhhccccceEEeeeceEEEEEEEec-CCceEEEEEecccCc--------------ccHHHHHHHHHHHhcCCCCCccee
Q 002278 613 RSTENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQYP--------------HNLREFETELETIGSIRHRNIVSL 677 (943)
Q Consensus 613 ~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--------------~~~~~~~~E~~~l~~l~h~niv~l 677 (943)
...++|+....||+|.||.|-+|+.. +++.||+|++.+... ...+.+.+|+.+|++++|||||++
T Consensus 94 k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~L 173 (576)
T KOG0585|consen 94 KQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKL 173 (576)
T ss_pred eehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEE
Confidence 45678999999999999999999965 688999999854311 123578899999999999999999
Q ss_pred eeEEecC--CcceEEEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCC
Q 002278 678 HGYALSP--YGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENF 755 (943)
Q Consensus 678 ~~~~~~~--~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~ 755 (943)
+.+..++ +..|+|+|||..|.+...- .....+++.++++++.+++.||+|||.+ +||||||||+|+|++++|
T Consensus 174 iEvLDDP~s~~~YlVley~s~G~v~w~p---~d~~els~~~Ar~ylrDvv~GLEYLH~Q---giiHRDIKPsNLLl~~~g 247 (576)
T KOG0585|consen 174 IEVLDDPESDKLYLVLEYCSKGEVKWCP---PDKPELSEQQARKYLRDVVLGLEYLHYQ---GIIHRDIKPSNLLLSSDG 247 (576)
T ss_pred EEeecCcccCceEEEEEeccCCccccCC---CCcccccHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEEcCCC
Confidence 9998764 5689999999998875433 1233399999999999999999999999 999999999999999999
Q ss_pred ceeecccccccccCCCCC----ceeeeEecccceeCccccccCC----CCCcchhhhHHHHHHHHHhCCCCCCCCccHHH
Q 002278 756 DAHLSDFGIARCIPTAMP----HASTFVLGTIGYIDPEYAHTSR----LNEKSDVYSFGIVLLEILTGKKAVDNESNLHQ 827 (943)
Q Consensus 756 ~~kl~DFGla~~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~----~~~~~DvwSlGvil~elltG~~p~~~~~~~~~ 827 (943)
+|||+|||.+........ ..-....|||.|+|||...++. .+.+.||||+||+||-|+.|+.||-+...++.
T Consensus 248 ~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~l 327 (576)
T KOG0585|consen 248 TVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELEL 327 (576)
T ss_pred cEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHHH
Confidence 999999999987633211 1112356999999999887733 45789999999999999999999988777666
Q ss_pred HHHHhccccccccccCcccccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcCC
Q 002278 828 LIMSKADDNTVMEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLVSLLP 889 (943)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~~~~ 889 (943)
.-.+....-.+++. + +....+.+++++++.+||+.|.+..+|..|.|....
T Consensus 328 ~~KIvn~pL~fP~~-----p------e~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~~ 378 (576)
T KOG0585|consen 328 FDKIVNDPLEFPEN-----P------EINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTRD 378 (576)
T ss_pred HHHHhcCcccCCCc-----c------cccHHHHHHHHHHhhcChhheeehhhheecceeccC
Confidence 55554332222221 1 123466789999999999999999999999886554
No 58
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=1.1e-37 Score=338.30 Aligned_cols=262 Identities=21% Similarity=0.247 Sum_probs=203.3
Q ss_pred hccccceEEeeeceEEEEEEEec-CCceEEEEEecccC-cccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEE
Q 002278 616 ENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQY-PHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDY 693 (943)
Q Consensus 616 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 693 (943)
++|+..+.||+|+||+||+|..+ +++.||+|++.... ......+.+|+++++.++||||+++++++...+..++||||
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 84 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEY 84 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeC
Confidence 56888999999999999999976 57889999886443 23345678999999999999999999999998899999999
Q ss_pred ccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCC
Q 002278 694 MVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMP 773 (943)
Q Consensus 694 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~ 773 (943)
++ |+|.+++.. ....+++..+..++.|++.||+|||++ +|+||||||+||++++++.+||+|||+++.......
T Consensus 85 ~~-~~l~~~l~~--~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~ 158 (288)
T cd07871 85 LD-SDLKQYLDN--CGNLMSMHNVKIFMFQLLRGLSYCHKR---KILHRDLKPQNLLINEKGELKLADFGLARAKSVPTK 158 (288)
T ss_pred CC-cCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEECcCcceeeccCCCc
Confidence 97 589888853 233578999999999999999999999 999999999999999999999999999976543222
Q ss_pred ceeeeEecccceeCcccccc-CCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccccC---
Q 002278 774 HASTFVLGTIGYIDPEYAHT-SRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVT--- 849 (943)
Q Consensus 774 ~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 849 (943)
. .....|++.|+|||++.+ ..++.++||||+||++|||+||+.||.+..............+......++.+...
T Consensus 159 ~-~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (288)
T cd07871 159 T-YSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEF 237 (288)
T ss_pred c-ccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhh
Confidence 1 123458999999998865 56899999999999999999999999876554443333222221111111111000
Q ss_pred --------c--c----CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 002278 850 --------C--V----DLSAVRKTFQLALLCTKRYPSERPTMQEVARVL 884 (943)
Q Consensus 850 --------~--~----~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L 884 (943)
. . .........+++.+|++.||.+|||++|+++|-
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~hp 286 (288)
T cd07871 238 RSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRHS 286 (288)
T ss_pred hccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcCC
Confidence 0 0 001124567899999999999999999998763
No 59
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=2.7e-37 Score=329.45 Aligned_cols=251 Identities=24% Similarity=0.378 Sum_probs=206.1
Q ss_pred hccccceEEeeeceEEEEEEEecCCceEEEEEecccCcccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEEcc
Q 002278 616 ENLSEKYIVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMV 695 (943)
Q Consensus 616 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 695 (943)
++|+..+.||+|+||.||+|.++++..+|+|.+... ....+.+.+|+++++.++||||+++++++......++||||++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~ 82 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEG-AMSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFME 82 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccCceEEEEecccC-CccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCC
Confidence 467888899999999999999988888999987643 3345678899999999999999999999999999999999999
Q ss_pred CCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCCce
Q 002278 696 NGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHA 775 (943)
Q Consensus 696 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~~~ 775 (943)
+|+|.++++.. ...+++..+..++.|++.||+|||+. +|+||||||+||++++++.+|++|||.++.........
T Consensus 83 ~~~L~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~~ 157 (256)
T cd05114 83 NGCLLNYLRQR--QGKLSKDMLLSMCQDVCEGMEYLERN---SFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTS 157 (256)
T ss_pred CCcHHHHHHhC--ccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcceEEEcCCCeEEECCCCCccccCCCceec
Confidence 99999998632 24589999999999999999999999 99999999999999999999999999998654332222
Q ss_pred eeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCccHHHHHHHhccccccccccCcccccCccCHH
Q 002278 776 STFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLS 854 (943)
Q Consensus 776 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 854 (943)
.....++..|+|||++.+..++.++||||||+++|||++ |+.||.................. ..+..
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~~----~~~~~-------- 225 (256)
T cd05114 158 SSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGFRL----YRPKL-------- 225 (256)
T ss_pred cCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCCC----CCCCC--------
Confidence 222235678999999998889999999999999999999 99999876554433333221111 01111
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 002278 855 AVRKTFQLALLCTKRYPSERPTMQEVARVL 884 (943)
Q Consensus 855 ~~~~l~~l~~~cl~~dP~~RPt~~el~~~L 884 (943)
....+.+++.+||+.+|++||++.++++.|
T Consensus 226 ~~~~~~~li~~c~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 226 ASMTVYEVMYSCWHEKPEGRPTFAELLRAI 255 (256)
T ss_pred CCHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 124678999999999999999999999876
No 60
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=8.9e-38 Score=346.43 Aligned_cols=255 Identities=20% Similarity=0.235 Sum_probs=207.5
Q ss_pred hccccceEEeeeceEEEEEEEec-CCceEEEEEecccC---cccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEE
Q 002278 616 ENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQY---PHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFY 691 (943)
Q Consensus 616 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 691 (943)
++|+..+.||+|+||.||+|++. .++.||+|++.... ......+.+|+++++.++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM 80 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence 36888999999999999999987 47899999986542 223456788999999999999999999999999999999
Q ss_pred EEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCC
Q 002278 692 DYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTA 771 (943)
Q Consensus 692 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~ 771 (943)
||+++|+|.+++. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 81 e~~~g~~L~~~l~---~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~- 153 (333)
T cd05600 81 EYVPGGDFRTLLN---NLGVLSEDHARFYMAEMFEAVDALHEL---GYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT- 153 (333)
T ss_pred eCCCCCCHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEEEeCcCCccccc-
Confidence 9999999999996 345689999999999999999999999 999999999999999999999999999986543
Q ss_pred CCceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccccCcc
Q 002278 772 MPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCV 851 (943)
Q Consensus 772 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 851 (943)
......||+.|+|||++.+..++.++||||+||++|||++|+.||........+............ |.... .
T Consensus 154 ---~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~---~~~~~--~ 225 (333)
T cd05600 154 ---YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQR---PVYDD--P 225 (333)
T ss_pred ---ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccccccC---CCCCc--c
Confidence 122345899999999999999999999999999999999999999876554433332221111111 11100 0
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 002278 852 DLSAVRKTFQLALLCTKRYPSERPTMQEVARVLV 885 (943)
Q Consensus 852 ~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~ 885 (943)
.......+.+++..|+..+|++||++.++++|.+
T Consensus 226 ~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h~~ 259 (333)
T cd05600 226 RFNLSDEAWDLITKLINDPSRRFGSLEDIKNHPF 259 (333)
T ss_pred ccccCHHHHHHHHHHhhChhhhcCCHHHHHhCcc
Confidence 0112246778999999999999999999998854
No 61
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-38 Score=330.27 Aligned_cols=271 Identities=25% Similarity=0.373 Sum_probs=210.5
Q ss_pred hhccccceEEeeeceEEEEEEEecCCceEEEEEecccCcccHHHHHHHHHHHhc--CCCCCcceeeeEEecCC----cce
Q 002278 615 TENLSEKYIVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGS--IRHRNIVSLHGYALSPY----GNL 688 (943)
Q Consensus 615 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~~----~~~ 688 (943)
....+...+||+|+||.||+|.+. ++.||||++.. +..+.|..|-++++. |+|+||++++++-...+ +++
T Consensus 209 l~pl~l~eli~~Grfg~V~KaqL~-~~~VAVKifp~---~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eyw 284 (534)
T KOG3653|consen 209 LDPLQLLELIGRGRFGCVWKAQLD-NRLVAVKIFPE---QEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYW 284 (534)
T ss_pred CCchhhHHHhhcCccceeehhhcc-CceeEEEecCH---HHHHHHHhHHHHHhccCccchhHHHhhchhccCCcccccee
Confidence 344556677999999999999987 48999999853 345778888888775 58999999999876655 789
Q ss_pred EEEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhC------CCCCeEecCCCCccEEECCCCceeeccc
Q 002278 689 LFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHD------CNPRIIHRDVKSSNILIDENFDAHLSDF 762 (943)
Q Consensus 689 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~------~~~~ivH~Dlkp~Nill~~~~~~kl~DF 762 (943)
+|++|.+.|+|.++|. ...++|....+|+..+++||+|||+. .+|+|+|||||++|||+.+|+++.|+||
T Consensus 285 LVt~fh~kGsL~dyL~----~ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDF 360 (534)
T KOG3653|consen 285 LVTEFHPKGSLCDYLK----ANTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADF 360 (534)
T ss_pred EEeeeccCCcHHHHHH----hccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeecc
Confidence 9999999999999995 56799999999999999999999975 4789999999999999999999999999
Q ss_pred ccccccCCCCCce-eeeEecccceeCccccccCC-CC-----CcchhhhHHHHHHHHHhCCCCCC--CCccHHHHHHHhc
Q 002278 763 GIARCIPTAMPHA-STFVLGTIGYIDPEYAHTSR-LN-----EKSDVYSFGIVLLEILTGKKAVD--NESNLHQLIMSKA 833 (943)
Q Consensus 763 Gla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~-~~-----~~~DvwSlGvil~elltG~~p~~--~~~~~~~~~~~~~ 833 (943)
|+|..+....+.. ....+||.+|||||++.+.- +. .+.||||+|.|+|||++....++ ...++..-.....
T Consensus 361 GLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~ev 440 (534)
T KOG3653|consen 361 GLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEV 440 (534)
T ss_pred ceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHh
Confidence 9999886544332 22357999999999988742 22 37899999999999998654442 1111110011111
Q ss_pred cc---------cccccccCcccccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcCCCCCC
Q 002278 834 DD---------NTVMEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLVSLLPAPPA 893 (943)
Q Consensus 834 ~~---------~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~~~~~~~~ 893 (943)
+. ..+.+..+|.++..+.....+..+.+.+..||+.||+.|-|+.=+.+++..+....+.
T Consensus 441 G~hPt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~~~~ 509 (534)
T KOG3653|consen 441 GNHPTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMMLWED 509 (534)
T ss_pred cCCCCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhccCCc
Confidence 11 1123345666666555556677888999999999999999999999998887765543
No 62
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=2.6e-37 Score=338.37 Aligned_cols=263 Identities=23% Similarity=0.318 Sum_probs=200.9
Q ss_pred hhccccceEEeeeceEEEEEEEecC-----------------CceEEEEEecccC-cccHHHHHHHHHHHhcCCCCCcce
Q 002278 615 TENLSEKYIVGYGASSTVYKCALKN-----------------SRPIAVKKLYNQY-PHNLREFETELETIGSIRHRNIVS 676 (943)
Q Consensus 615 ~~~~~~~~~lG~G~~g~Vy~~~~~~-----------------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~ 676 (943)
.++|...+.||+|+||.||+|.+++ +..||+|.+.... .....++.+|++++++++||||++
T Consensus 4 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 83 (304)
T cd05096 4 RGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIR 83 (304)
T ss_pred hhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeE
Confidence 3578888999999999999998542 2369999886543 223457889999999999999999
Q ss_pred eeeEEecCCcceEEEEEccCCChhhhccCCC----------------CCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeE
Q 002278 677 LHGYALSPYGNLLFYDYMVNGSLWDLLHGPS----------------KKVKLDWETRLKIAVGAAQGLAYLHHDCNPRII 740 (943)
Q Consensus 677 l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~----------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iv 740 (943)
+++++.+.+..++||||+++|+|.+++.... ....+++.++.+++.|++.||+|||+. +|+
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~iv 160 (304)
T cd05096 84 LLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSL---NFV 160 (304)
T ss_pred EEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHC---Ccc
Confidence 9999999999999999999999999885321 113478889999999999999999999 999
Q ss_pred ecCCCCccEEECCCCceeecccccccccCCCCCc-eeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHh--CCC
Q 002278 741 HRDVKSSNILIDENFDAHLSDFGIARCIPTAMPH-ASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT--GKK 817 (943)
Q Consensus 741 H~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt--G~~ 817 (943)
||||||+||++++++.+||+|||+++........ ......++..|+|||++.+..++.++|||||||++|||++ +..
T Consensus 161 H~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~ 240 (304)
T cd05096 161 HRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQ 240 (304)
T ss_pred ccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCC
Confidence 9999999999999999999999999865433221 1122335788999999998899999999999999999987 567
Q ss_pred CCCCCccHHHHHHHhccccccccccCcccccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 002278 818 AVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLV 885 (943)
Q Consensus 818 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~ 885 (943)
||............................. .....+.+++.+||+.||++|||+.++.+.|+
T Consensus 241 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~ 303 (304)
T cd05096 241 PYGELTDEQVIENAGEFFRDQGRQVYLFRPP-----PCPQGLYELMLQCWSRDCRERPSFSDIHAFLT 303 (304)
T ss_pred CCCcCCHHHHHHHHHHHhhhccccccccCCC-----CCCHHHHHHHHHHccCCchhCcCHHHHHHHHh
Confidence 7775443222111110000000000000010 11246789999999999999999999998875
No 63
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=3.6e-37 Score=330.35 Aligned_cols=256 Identities=22% Similarity=0.344 Sum_probs=204.8
Q ss_pred hhccccceEEeeeceEEEEEEEec----CCceEEEEEecccCc-ccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceE
Q 002278 615 TENLSEKYIVGYGASSTVYKCALK----NSRPIAVKKLYNQYP-HNLREFETELETIGSIRHRNIVSLHGYALSPYGNLL 689 (943)
Q Consensus 615 ~~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 689 (943)
.++|+..+.||+|+||.||+|.++ .+..||+|.+..... .....+.+|+.+++.++||||+++++++...+..++
T Consensus 4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 83 (266)
T cd05064 4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMI 83 (266)
T ss_pred hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEE
Confidence 457888999999999999999864 356899999875432 334578899999999999999999999999999999
Q ss_pred EEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccC
Q 002278 690 FYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIP 769 (943)
Q Consensus 690 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~ 769 (943)
||||+++|+|.+++... ...+++.+++.++.|++.||+|||+. +++||||||+||+++.++.++++|||.+....
T Consensus 84 v~e~~~~~~L~~~l~~~--~~~l~~~~~~~~~~~i~~al~~lH~~---~iiH~dikp~nili~~~~~~~l~dfg~~~~~~ 158 (266)
T cd05064 84 VTEYMSNGALDSFLRKH--EGQLVAGQLMGMLPGLASGMKYLSEM---GYVHKGLAAHKVLVNSDLVCKISGFRRLQEDK 158 (266)
T ss_pred EEEeCCCCcHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHHC---CEeeccccHhhEEEcCCCcEEECCCccccccc
Confidence 99999999999998632 34689999999999999999999999 99999999999999999999999999876543
Q ss_pred CCCCceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCccHHHHHHHhccccccccccCccccc
Q 002278 770 TAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSV 848 (943)
Q Consensus 770 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 848 (943)
...........++..|+|||++.+..++.++|||||||++||+++ |+.||.+.......... ...... ..+.
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~-~~~~~~------~~~~ 231 (266)
T cd05064 159 SEAIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAV-EDGFRL------PAPR 231 (266)
T ss_pred ccchhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHH-HCCCCC------CCCC
Confidence 222111112235678999999999999999999999999999775 99999866543322222 111110 1111
Q ss_pred CccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhc
Q 002278 849 TCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLVSL 887 (943)
Q Consensus 849 ~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~~ 887 (943)
.....+.+++..||+.+|++||++.++.+.|..+
T Consensus 232 -----~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 232 -----NCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred -----CCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 1224677899999999999999999999988653
No 64
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=7.6e-38 Score=343.48 Aligned_cols=242 Identities=21% Similarity=0.252 Sum_probs=197.4
Q ss_pred EeeeceEEEEEEEec-CCceEEEEEecccC---cccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEEccCCCh
Q 002278 624 VGYGASSTVYKCALK-NSRPIAVKKLYNQY---PHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSL 699 (943)
Q Consensus 624 lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 699 (943)
||+|+||.||+|... +++.||+|++.... ......+.+|++++++++||||+++++++...+..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 699999999999976 47889999986432 33445678899999999999999999999999999999999999999
Q ss_pred hhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCCceeeeE
Q 002278 700 WDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFV 779 (943)
Q Consensus 700 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~~ 779 (943)
.+++. ....+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++....... .....
T Consensus 81 ~~~l~---~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~-~~~~~ 153 (312)
T cd05585 81 FHHLQ---REGRFDLSRARFYTAELLCALENLHKF---NVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDD-KTNTF 153 (312)
T ss_pred HHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHeEECCCCcEEEEECcccccCccCCC-ccccc
Confidence 99986 345689999999999999999999999 999999999999999999999999999986433222 22335
Q ss_pred ecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccccCccCHHHHHHH
Q 002278 780 LGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAVRKT 859 (943)
Q Consensus 780 ~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 859 (943)
.||+.|+|||++.+..++.++||||+||++|||+||+.||.+.................+. .+ ...+
T Consensus 154 ~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~----~~---------~~~~ 220 (312)
T cd05585 154 CGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQEPLRFPD----GF---------DRDA 220 (312)
T ss_pred cCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCCCCC----cC---------CHHH
Confidence 6999999999999999999999999999999999999999876543333222221111111 11 1456
Q ss_pred HHHHHHccCCCCCCCC---CHHHHHHHHh
Q 002278 860 FQLALLCTKRYPSERP---TMQEVARVLV 885 (943)
Q Consensus 860 ~~l~~~cl~~dP~~RP---t~~el~~~L~ 885 (943)
.+++..||+.||++|| ++.+++.|-+
T Consensus 221 ~~li~~~L~~dp~~R~~~~~~~e~l~hp~ 249 (312)
T cd05585 221 KDLLIGLLSRDPTRRLGYNGAQEIKNHPF 249 (312)
T ss_pred HHHHHHHcCCCHHHcCCCCCHHHHHcCCC
Confidence 7899999999999997 4677777643
No 65
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=2.9e-37 Score=348.35 Aligned_cols=254 Identities=19% Similarity=0.222 Sum_probs=200.5
Q ss_pred ccccceEEeeeceEEEEEEEec-CCceEEEEEecccC---cccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEE
Q 002278 617 NLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQY---PHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYD 692 (943)
Q Consensus 617 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 692 (943)
.|+..+.||+|+||+||+|+.+ +++.||+|++.... ....+.+.+|+++++.++||||+++++++.+.+..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 5788899999999999999875 57889999986532 2334568899999999999999999999999999999999
Q ss_pred EccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCC
Q 002278 693 YMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAM 772 (943)
Q Consensus 693 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~ 772 (943)
|+++|+|.+++. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++++||+|||+++.+....
T Consensus 82 ~~~gg~L~~~l~---~~~~~~e~~~~~~~~qi~~aL~~LH~~---givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~ 155 (381)
T cd05626 82 YIPGGDMMSLLI---RMEVFPEVLARFYIAELTLAIESVHKM---GFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTH 155 (381)
T ss_pred cCCCCcHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCcHHHEEECCCCCEEEeeCcCCccccccc
Confidence 999999999986 345688999999999999999999999 99999999999999999999999999976431100
Q ss_pred C----------------------------------------------ceeeeEecccceeCccccccCCCCCcchhhhHH
Q 002278 773 P----------------------------------------------HASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFG 806 (943)
Q Consensus 773 ~----------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG 806 (943)
. .......||+.|+|||++.+..++.++||||||
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG 235 (381)
T cd05626 156 NSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVG 235 (381)
T ss_pred ccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehh
Confidence 0 001124699999999999998999999999999
Q ss_pred HHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccccCccCHHHHHHHHHHHHH--ccCCCCCCCCCHHHHHHHH
Q 002278 807 IVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAVRKTFQLALL--CTKRYPSERPTMQEVARVL 884 (943)
Q Consensus 807 vil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~--cl~~dP~~RPt~~el~~~L 884 (943)
|++|||+||+.||..........................+ .....+++.+ |+..+|..||++.++++|-
T Consensus 236 ~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~---------s~~~~dli~~ll~~~~~~~~R~~~~~~l~hp 306 (381)
T cd05626 236 VILFEMLVGQPPFLAPTPTETQLKVINWENTLHIPPQVKL---------SPEAVDLITKLCCSAEERLGRNGADDIKAHP 306 (381)
T ss_pred hHHHHHHhCCCCCcCCCHHHHHHHHHccccccCCCCCCCC---------CHHHHHHHHHHccCcccccCCCCHHHHhcCc
Confidence 9999999999999876654443333221111110000011 1345567766 5667777799999999985
Q ss_pred h
Q 002278 885 V 885 (943)
Q Consensus 885 ~ 885 (943)
+
T Consensus 307 ~ 307 (381)
T cd05626 307 F 307 (381)
T ss_pred c
Confidence 4
No 66
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.4e-38 Score=325.26 Aligned_cols=259 Identities=24% Similarity=0.309 Sum_probs=205.4
Q ss_pred hccccceEEeeeceEEEEEEEecC-CceEEEEEecccCcccHHHHHHHHHHHhcCCCCCcceeeeEEecCCc-----ceE
Q 002278 616 ENLSEKYIVGYGASSTVYKCALKN-SRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYALSPYG-----NLL 689 (943)
Q Consensus 616 ~~~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-----~~l 689 (943)
-.|...+++|.|+||.||+|.... ++.||||++.... +.-.+|+++|+.+.|||||++.-+|....+ ..+
T Consensus 24 i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~----r~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnl 99 (364)
T KOG0658|consen 24 ISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDK----RYKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNL 99 (364)
T ss_pred EEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCC----CcCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHH
Confidence 357778899999999999999764 6899999986542 233579999999999999999998864332 357
Q ss_pred EEEEccCCChhhhccCC-CCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCC-Cceeecccccccc
Q 002278 690 FYDYMVNGSLWDLLHGP-SKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDEN-FDAHLSDFGIARC 767 (943)
Q Consensus 690 v~e~~~~g~L~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~-~~~kl~DFGla~~ 767 (943)
||||++. +|.+.++.. ..+..++...+.-+..|+.+||+|||+. +|+||||||+|+|+|.+ |.+||||||.|+.
T Consensus 100 VleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~---~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~ 175 (364)
T KOG0658|consen 100 VLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSH---GICHRDIKPQNLLVDPDTGVLKICDFGSAKV 175 (364)
T ss_pred HHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhc---CcccCCCChheEEEcCCCCeEEeccCCccee
Confidence 9999975 788887631 1245678888899999999999999998 99999999999999955 9999999999999
Q ss_pred cCCCCCceeeeEecccceeCcccccc-CCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhcccccccc------
Q 002278 768 IPTAMPHASTFVLGTIGYIDPEYAHT-SRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVME------ 840 (943)
Q Consensus 768 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~------ 840 (943)
+....+..+ ...|..|+|||.+.+ ..|+.+.||||.|||+.||+-|++-|.+++...+++.+...-+...+
T Consensus 176 L~~~epniS--YicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~m 253 (364)
T KOG0658|consen 176 LVKGEPNIS--YICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSM 253 (364)
T ss_pred eccCCCcee--EEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhc
Confidence 877665543 446999999999887 57999999999999999999999999999988888777654443221
Q ss_pred ------ccCcccccCc----cCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 002278 841 ------AVDPEVSVTC----VDLSAVRKTFQLALLCTKRYPSERPTMQEVARVL 884 (943)
Q Consensus 841 ------~~~~~~~~~~----~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L 884 (943)
...|.+.... .......+..+++.+++..+|.+|.++.|++.|-
T Consensus 254 n~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~ 307 (364)
T KOG0658|consen 254 NPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHP 307 (364)
T ss_pred CcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcch
Confidence 1111111110 1112235678999999999999999999998763
No 67
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=2.7e-37 Score=345.95 Aligned_cols=256 Identities=20% Similarity=0.231 Sum_probs=203.7
Q ss_pred HhhccccceEEeeeceEEEEEEEec-CCceEEEEEecccC---cccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceE
Q 002278 614 STENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQY---PHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLL 689 (943)
Q Consensus 614 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 689 (943)
..++|+..+.||+|+||.||+|+.+ +++.||+|.+.+.. ....+.+.+|+.+++.++||||+++++++.++...++
T Consensus 41 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~l 120 (370)
T cd05621 41 KAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYM 120 (370)
T ss_pred CHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEE
Confidence 4578999999999999999999986 46789999885421 2234567889999999999999999999999999999
Q ss_pred EEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccC
Q 002278 690 FYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIP 769 (943)
Q Consensus 690 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~ 769 (943)
||||+++|+|.+++.. ..+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+|+...
T Consensus 121 v~Ey~~gg~L~~~l~~----~~~~~~~~~~~~~qil~aL~~LH~~---~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~ 193 (370)
T cd05621 121 VMEYMPGGDLVNLMSN----YDVPEKWAKFYTAEVVLALDAIHSM---GLIHRDVKPDNMLLDKHGHLKLADFGTCMKMD 193 (370)
T ss_pred EEcCCCCCcHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEEecccceecc
Confidence 9999999999999852 3578899999999999999999999 99999999999999999999999999998764
Q ss_pred CCCCceeeeEecccceeCccccccCC----CCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcc
Q 002278 770 TAMPHASTFVLGTIGYIDPEYAHTSR----LNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPE 845 (943)
Q Consensus 770 ~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 845 (943)
...........||+.|+|||++.+.. ++.++||||+||++|||++|+.||...........+........ .+..
T Consensus 194 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~--~p~~ 271 (370)
T cd05621 194 ETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLN--FPED 271 (370)
T ss_pred cCCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcccC--CCCc
Confidence 33222223456999999999987643 78899999999999999999999987665444433332211111 0000
Q ss_pred cccCccCHHHHHHHHHHHHHccCCCCCC--CCCHHHHHHHHh
Q 002278 846 VSVTCVDLSAVRKTFQLALLCTKRYPSE--RPTMQEVARVLV 885 (943)
Q Consensus 846 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~--RPt~~el~~~L~ 885 (943)
. .....+.+++..|+..+|.+ ||++.|+++|-+
T Consensus 272 ~-------~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~hp~ 306 (370)
T cd05621 272 V-------EISKHAKNLICAFLTDREVRLGRNGVEEIKQHPF 306 (370)
T ss_pred c-------cCCHHHHHHHHHHccCchhccCCCCHHHHhcCcc
Confidence 0 11234567888888755544 899999999865
No 68
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=2.5e-37 Score=346.73 Aligned_cols=256 Identities=21% Similarity=0.245 Sum_probs=206.0
Q ss_pred HhhccccceEEeeeceEEEEEEEec-CCceEEEEEecccC---cccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceE
Q 002278 614 STENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQY---PHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLL 689 (943)
Q Consensus 614 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 689 (943)
..++|+..+.||+|+||.||+|+.+ +++.||+|++.+.. ....+.+.+|+.+++.++||||+++++++.++...++
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~l 120 (370)
T cd05596 41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYM 120 (370)
T ss_pred CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEE
Confidence 4578999999999999999999976 57889999985421 2233457789999999999999999999999999999
Q ss_pred EEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccC
Q 002278 690 FYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIP 769 (943)
Q Consensus 690 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~ 769 (943)
||||+++|+|.+++.. ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 121 v~Ey~~gg~L~~~l~~----~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~ 193 (370)
T cd05596 121 VMEYMPGGDLVNLMSN----YDIPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMD 193 (370)
T ss_pred EEcCCCCCcHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEcCCCCEEEEeccceeecc
Confidence 9999999999999852 3578889999999999999999999 99999999999999999999999999998764
Q ss_pred CCCCceeeeEecccceeCccccccC----CCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcc
Q 002278 770 TAMPHASTFVLGTIGYIDPEYAHTS----RLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPE 845 (943)
Q Consensus 770 ~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 845 (943)
...........||+.|+|||++.+. .++.++|||||||++|||++|+.||........+..+........ . |.
T Consensus 194 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~--~-~~ 270 (370)
T cd05596 194 ANGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKNSLT--F-PD 270 (370)
T ss_pred CCCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCcCC--C-CC
Confidence 4322222345699999999988653 478999999999999999999999987665444333322211111 0 11
Q ss_pred cccCccCHHHHHHHHHHHHHccCCCCCC--CCCHHHHHHHHh
Q 002278 846 VSVTCVDLSAVRKTFQLALLCTKRYPSE--RPTMQEVARVLV 885 (943)
Q Consensus 846 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~--RPt~~el~~~L~ 885 (943)
. ......+.+++..|+..+|++ ||++.++++|-+
T Consensus 271 ~------~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h~~ 306 (370)
T cd05596 271 D------IEISKQAKDLICAFLTDREVRLGRNGVDEIKSHPF 306 (370)
T ss_pred c------CCCCHHHHHHHHHHccChhhccCCCCHHHHhcCcc
Confidence 0 011245678999999999998 999999999854
No 69
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=3.6e-37 Score=340.96 Aligned_cols=259 Identities=22% Similarity=0.303 Sum_probs=205.7
Q ss_pred hhccccceEEeeeceEEEEEEEec-CCceEEEEEecccC-cccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEE
Q 002278 615 TENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQY-PHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYD 692 (943)
Q Consensus 615 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 692 (943)
.++|+..+.||+|+||.||+|.++ ++..||+|.+.... ......+.+|++++++++||||+++++++..++..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEee
Confidence 367889999999999999999977 46778888876442 2344678999999999999999999999999999999999
Q ss_pred EccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCC
Q 002278 693 YMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAM 772 (943)
Q Consensus 693 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~ 772 (943)
|+++|+|.+++.. ...+++..+..++.|++.||+|||+.+ +|+||||||+||+++.++.+||+|||++.......
T Consensus 84 ~~~~~~L~~~l~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~--~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 158 (331)
T cd06649 84 HMDGGSLDQVLKE---AKRIPEEILGKVSIAVLRGLAYLREKH--QIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM 158 (331)
T ss_pred cCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHhhcC--CEEcCCCChhhEEEcCCCcEEEccCcccccccccc
Confidence 9999999999863 346899999999999999999999852 69999999999999999999999999997654322
Q ss_pred CceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhcccc-c----ccc-------
Q 002278 773 PHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDN-T----VME------- 840 (943)
Q Consensus 773 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~-~----~~~------- 840 (943)
.....|++.|+|||++.+..++.++|||||||++|||+||+.||........ ........ . ...
T Consensus 159 ---~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 234 (331)
T cd06649 159 ---ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKEL-EAIFGRPVVDGEEGEPHSISPRPR 234 (331)
T ss_pred ---cccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHhcccccccccCCccccCcccc
Confidence 1234589999999999999999999999999999999999999975543221 11111000 0 000
Q ss_pred ----------------------------ccCcccccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhh
Q 002278 841 ----------------------------AVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLVS 886 (943)
Q Consensus 841 ----------------------------~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~ 886 (943)
...+... .......+.+++.+||+.||++|||+.++++|.+-
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~~ 304 (331)
T cd06649 235 PPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLP----NGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTFI 304 (331)
T ss_pred cccccccccccccccchhHHHHHHHHHhCCCcCCC----CccccHHHHHHHHHHccCCcccCCCHHHHhcChHH
Confidence 0000000 00123567899999999999999999999998753
No 70
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=3.5e-37 Score=338.54 Aligned_cols=242 Identities=21% Similarity=0.288 Sum_probs=193.2
Q ss_pred eEEeeeceEEEEEEEec-CCceEEEEEecccC---cccHHHHHHHHHHHhcC-CCCCcceeeeEEecCCcceEEEEEccC
Q 002278 622 YIVGYGASSTVYKCALK-NSRPIAVKKLYNQY---PHNLREFETELETIGSI-RHRNIVSLHGYALSPYGNLLFYDYMVN 696 (943)
Q Consensus 622 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 696 (943)
+.||+|+||.||+|..+ +++.||+|.+.... ....+.+..|..++... +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 36999999999999976 46789999886532 22344556677776654 799999999999999999999999999
Q ss_pred CChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCCcee
Q 002278 697 GSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHAS 776 (943)
Q Consensus 697 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~~~~ 776 (943)
|+|.+++. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...... ...
T Consensus 81 g~L~~~~~---~~~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~-~~~ 153 (316)
T cd05592 81 GDLMFHIQ---SSGRFDEARARFYAAEIICGLQFLHKK---GIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGE-GKA 153 (316)
T ss_pred CcHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCC-Ccc
Confidence 99999886 345689999999999999999999999 99999999999999999999999999998653322 222
Q ss_pred eeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccccCccCHHHH
Q 002278 777 TFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAV 856 (943)
Q Consensus 777 ~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 856 (943)
....||+.|+|||++.+..++.++|||||||++|||++|+.||.+.................+ ..+ .
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~----~~~---------~ 220 (316)
T cd05592 154 STFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILNDRPHFP----RWI---------S 220 (316)
T ss_pred ccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCC----CCC---------C
Confidence 345699999999999999999999999999999999999999987655433322221111111 111 1
Q ss_pred HHHHHHHHHccCCCCCCCCCHH-HHHHH
Q 002278 857 RKTFQLALLCTKRYPSERPTMQ-EVARV 883 (943)
Q Consensus 857 ~~l~~l~~~cl~~dP~~RPt~~-el~~~ 883 (943)
..+.+++..||+.||++||++. ++.++
T Consensus 221 ~~~~~ll~~~l~~~P~~R~~~~~~l~~h 248 (316)
T cd05592 221 KEAKDCLSKLFERDPTKRLGVDGDIRQH 248 (316)
T ss_pred HHHHHHHHHHccCCHHHcCCChHHHHcC
Confidence 3566899999999999999865 56554
No 71
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=2.7e-37 Score=347.24 Aligned_cols=254 Identities=21% Similarity=0.244 Sum_probs=204.1
Q ss_pred hccccceEEeeeceEEEEEEEec-CCceEEEEEecccC---cccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEE
Q 002278 616 ENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQY---PHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFY 691 (943)
Q Consensus 616 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 691 (943)
++|+..+.||+|+||+||+|+.. +++.||||++.... ......+.+|+++++.++||||+++++++.+++..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence 36888999999999999999976 57889999986432 233456788999999999999999999999999999999
Q ss_pred EEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCC
Q 002278 692 DYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTA 771 (943)
Q Consensus 692 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~ 771 (943)
||+++|+|.+++. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.+...
T Consensus 81 E~~~~g~L~~~l~---~~~~l~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 154 (364)
T cd05599 81 EYLPGGDMMTLLM---KKDTFTEEETRFYIAETILAIDSIHKL---GYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKS 154 (364)
T ss_pred CCCCCcHHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEeecccceecccc
Confidence 9999999999986 345689999999999999999999999 9999999999999999999999999999764321
Q ss_pred CCc-------------------------------------eeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHh
Q 002278 772 MPH-------------------------------------ASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT 814 (943)
Q Consensus 772 ~~~-------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt 814 (943)
... .....+||+.|+|||++.+..++.++|||||||++|||++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~ 234 (364)
T cd05599 155 HRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLV 234 (364)
T ss_pred ccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhc
Confidence 100 0112359999999999999999999999999999999999
Q ss_pred CCCCCCCCccHHHHHHHhccccccccccCcccccCccCHHHHHHHHHHHHHccCCCCCCCCC---HHHHHHHHh
Q 002278 815 GKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPT---MQEVARVLV 885 (943)
Q Consensus 815 G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt---~~el~~~L~ 885 (943)
|+.||.+.................. ..... .....+.+++..|+. +|.+|++ +.++++|-+
T Consensus 235 G~~Pf~~~~~~~~~~~i~~~~~~~~--~~~~~-------~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h~~ 298 (364)
T cd05599 235 GYPPFCSDNPQETYRKIINWKETLQ--FPDEV-------PLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSHPF 298 (364)
T ss_pred CCCCCCCCCHHHHHHHHHcCCCccC--CCCCC-------CCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcCCC
Confidence 9999987765544333322211111 01110 112355678888886 8999997 999988754
No 72
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-37 Score=331.51 Aligned_cols=264 Identities=22% Similarity=0.338 Sum_probs=208.8
Q ss_pred HhhccccceEEeeeceEEEEEEEecCCceEEEEEecccCccc-HHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEE
Q 002278 614 STENLSEKYIVGYGASSTVYKCALKNSRPIAVKKLYNQYPHN-LREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYD 692 (943)
Q Consensus 614 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 692 (943)
+......++.||+|.||.|..|....+.+||||+++...... ..+|.+|+++|.+++|||||+++|+|..++..++++|
T Consensus 536 PRs~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~E 615 (807)
T KOG1094|consen 536 PRSRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITE 615 (807)
T ss_pred chhheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHH
Confidence 345566778899999999999999888999999998766444 4789999999999999999999999999999999999
Q ss_pred EccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCC
Q 002278 693 YMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAM 772 (943)
Q Consensus 693 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~ 772 (943)
|+++|+|..++...... ........+|+.|||.|++||.+. ++||||+.++|+|++.++++||+|||+++.+-...
T Consensus 616 YmEnGDLnqFl~aheap-t~~t~~~vsi~tqiasgmaYLes~---nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~ 691 (807)
T KOG1094|consen 616 YMENGDLNQFLSAHELP-TAETAPGVSICTQIASGMAYLESL---NFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGD 691 (807)
T ss_pred HHhcCcHHHHHHhccCc-ccccchhHHHHHHHHHHHHHHHhh---chhhccccccceeecCcccEEecCcccccccccCC
Confidence 99999999999743211 245556678999999999999998 99999999999999999999999999999654443
Q ss_pred Cc-eeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHh--CCCCCCCCccHHHHHHHhc-cccccccccCccccc
Q 002278 773 PH-ASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT--GKKAVDNESNLHQLIMSKA-DDNTVMEAVDPEVSV 848 (943)
Q Consensus 773 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt--G~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 848 (943)
.+ .....+=+.+|||||.+.-+++++++|||+||+++||+++ .+.||....+.. .+.... -.......+-+..+.
T Consensus 692 yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~-vven~~~~~~~~~~~~~l~~P~ 770 (807)
T KOG1094|consen 692 YYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQ-VVENAGEFFRDQGRQVVLSRPP 770 (807)
T ss_pred ceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHH-HHHhhhhhcCCCCcceeccCCC
Confidence 33 2333445789999999999999999999999999999876 788887543321 111110 000000111111111
Q ss_pred CccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhc
Q 002278 849 TCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLVSL 887 (943)
Q Consensus 849 ~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~~ 887 (943)
.++..+++++..||..|-++||+++++..+|...
T Consensus 771 -----~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 771 -----ACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred -----cCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 2346788999999999999999999999998753
No 73
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=2.6e-37 Score=340.79 Aligned_cols=244 Identities=23% Similarity=0.278 Sum_probs=199.4
Q ss_pred eEEeeeceEEEEEEEec----CCceEEEEEecccC----cccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEE
Q 002278 622 YIVGYGASSTVYKCALK----NSRPIAVKKLYNQY----PHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDY 693 (943)
Q Consensus 622 ~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 693 (943)
+.||+|+||.||+|+.. .++.||+|.+.... ......+.+|+++++.++||||+++++++..++..++||||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 57999999999999853 46889999986432 22345677899999999999999999999999999999999
Q ss_pred ccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCC
Q 002278 694 MVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMP 773 (943)
Q Consensus 694 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~ 773 (943)
+++|+|.+++. ....+.+..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 82 ~~~~~L~~~~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 155 (323)
T cd05584 82 LSGGELFMHLE---REGIFMEDTACFYLSEISLALEHLHQQ---GIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGT 155 (323)
T ss_pred CCCchHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEeeCcCCeecccCCC
Confidence 99999999986 345688899999999999999999999 999999999999999999999999999875432222
Q ss_pred ceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccccCccCH
Q 002278 774 HASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDL 853 (943)
Q Consensus 774 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 853 (943)
......||+.|+|||++.+..++.++|||||||++|||++|+.||................... ++.+
T Consensus 156 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~----~~~~------- 223 (323)
T cd05584 156 -VTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKGKLNL----PPYL------- 223 (323)
T ss_pred -cccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCC----CCCC-------
Confidence 2223468999999999999899999999999999999999999998766544333332222111 1111
Q ss_pred HHHHHHHHHHHHccCCCCCCCC-----CHHHHHHHHh
Q 002278 854 SAVRKTFQLALLCTKRYPSERP-----TMQEVARVLV 885 (943)
Q Consensus 854 ~~~~~l~~l~~~cl~~dP~~RP-----t~~el~~~L~ 885 (943)
...+.+++.+|++.||++|| ++.+++++-+
T Consensus 224 --~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h~~ 258 (323)
T cd05584 224 --TPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSHPF 258 (323)
T ss_pred --CHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcCCC
Confidence 14567899999999999999 8999988753
No 74
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=2.5e-37 Score=340.39 Aligned_cols=244 Identities=21% Similarity=0.274 Sum_probs=197.5
Q ss_pred eEEeeeceEEEEEEEec-CCceEEEEEecccC---cccHHHHHHHHHHHhcC-CCCCcceeeeEEecCCcceEEEEEccC
Q 002278 622 YIVGYGASSTVYKCALK-NSRPIAVKKLYNQY---PHNLREFETELETIGSI-RHRNIVSLHGYALSPYGNLLFYDYMVN 696 (943)
Q Consensus 622 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 696 (943)
+.||+|+||+||+|+.+ +++.||+|++.+.. ....+.+..|.++++.+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 36999999999999976 47889999986432 23445677888888876 699999999999999999999999999
Q ss_pred CChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCCcee
Q 002278 697 GSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHAS 776 (943)
Q Consensus 697 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~~~~ 776 (943)
|+|.+++. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...... ...
T Consensus 81 g~L~~~i~---~~~~l~~~~~~~~~~ql~~~L~~lH~~---~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~-~~~ 153 (320)
T cd05590 81 GDLMFHIQ---KSRRFDEARARFYAAEITSALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNG-KTT 153 (320)
T ss_pred chHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCC-Ccc
Confidence 99999886 345689999999999999999999999 99999999999999999999999999987543221 122
Q ss_pred eeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccccCccCHHHH
Q 002278 777 TFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAV 856 (943)
Q Consensus 777 ~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 856 (943)
....||+.|+|||++.+..++.++||||+||++|||++|+.||...................+.. + .
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~----~---------~ 220 (320)
T cd05590 154 STFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPTW----L---------S 220 (320)
T ss_pred cccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCCCCCCC----C---------C
Confidence 33569999999999999999999999999999999999999998766544333322221111111 1 1
Q ss_pred HHHHHHHHHccCCCCCCCCCH------HHHHHHHh
Q 002278 857 RKTFQLALLCTKRYPSERPTM------QEVARVLV 885 (943)
Q Consensus 857 ~~l~~l~~~cl~~dP~~RPt~------~el~~~L~ 885 (943)
..+.+++..|++.||++||++ .++++|-+
T Consensus 221 ~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h~~ 255 (320)
T cd05590 221 QDAVDILKAFMTKNPTMRLGSLTLGGEEAILRHPF 255 (320)
T ss_pred HHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcCCC
Confidence 456789999999999999998 77776643
No 75
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=2.2e-37 Score=346.29 Aligned_cols=254 Identities=23% Similarity=0.261 Sum_probs=208.8
Q ss_pred hccccceEEeeeceEEEEEEEec-CCceEEEEEecccC---cccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEE
Q 002278 616 ENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQY---PHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFY 691 (943)
Q Consensus 616 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 691 (943)
++|...+.||+|+||+||+|... +++.||+|++.... ......+.+|+++++.++||||+++++++.+++..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence 36888999999999999999976 68899999986432 234567889999999999999999999999999999999
Q ss_pred EEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCC
Q 002278 692 DYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTA 771 (943)
Q Consensus 692 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~ 771 (943)
||+++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 81 e~~~~~~L~~~l~~---~~~l~~~~~~~i~~qi~~aL~~LH~~---giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~ 154 (350)
T cd05573 81 EYMPGGDLMNLLIR---KDVFPEETARFYIAELVLALDSVHKL---GFIHRDIKPDNILIDADGHIKLADFGLCKKMNKA 154 (350)
T ss_pred cCCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEeecCCCCccCccc
Confidence 99999999999873 35789999999999999999999998 9999999999999999999999999999876543
Q ss_pred C----------------------------CceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCc
Q 002278 772 M----------------------------PHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNES 823 (943)
Q Consensus 772 ~----------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~ 823 (943)
. ........||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~ 234 (350)
T cd05573 155 KDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDT 234 (350)
T ss_pred CcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCC
Confidence 2 112233569999999999999999999999999999999999999998776
Q ss_pred cHHHHHHHhccccccccccCcccccCccCHHHHHHHHHHHHHccCCCCCCCCC-HHHHHHHHh
Q 002278 824 NLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPT-MQEVARVLV 885 (943)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt-~~el~~~L~ 885 (943)
....+...............+. ....+.+++..|+. ||.+||+ +.++++|.+
T Consensus 235 ~~~~~~~i~~~~~~~~~p~~~~---------~~~~~~~li~~ll~-dp~~R~~s~~~ll~hp~ 287 (350)
T cd05573 235 LQETYNKIINWKESLRFPPDPP---------VSPEAIDLICRLLC-DPEDRLGSFEEIKSHPF 287 (350)
T ss_pred HHHHHHHHhccCCcccCCCCCC---------CCHHHHHHHHHHcc-ChhhcCCCHHHHhcCCC
Confidence 5444433333111111100111 12466789999997 9999999 999999854
No 76
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=2.3e-37 Score=341.73 Aligned_cols=244 Identities=18% Similarity=0.246 Sum_probs=198.8
Q ss_pred eEEeeeceEEEEEEEec-CCceEEEEEecccC---cccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEEccCC
Q 002278 622 YIVGYGASSTVYKCALK-NSRPIAVKKLYNQY---PHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNG 697 (943)
Q Consensus 622 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 697 (943)
+.||+|+||.||+|..+ +++.||+|.+.... ......+..|+++++.++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 36999999999999975 57899999986532 233456778999999999999999999999999999999999999
Q ss_pred ChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhh-CCCCCeEecCCCCccEEECCCCceeecccccccccCCCCCcee
Q 002278 698 SLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHH-DCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHAS 776 (943)
Q Consensus 698 ~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~~~~ 776 (943)
+|.+++. ....+++..+..++.|++.||+|||+ . +|+||||||+||+++.++.+||+|||+++....... ..
T Consensus 81 ~L~~~l~---~~~~l~~~~~~~~~~qi~~aL~~lH~~~---~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~-~~ 153 (325)
T cd05594 81 ELFFHLS---RERVFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA-TM 153 (325)
T ss_pred cHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHhcC---CEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCc-cc
Confidence 9999886 34468999999999999999999997 6 999999999999999999999999999875432221 22
Q ss_pred eeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccccCccCHHHH
Q 002278 777 TFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAV 856 (943)
Q Consensus 777 ~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 856 (943)
....||+.|+|||++.+..++.++|||||||++|||+||+.||.+................++.. + .
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~~~~~~p~~----~---------~ 220 (325)
T cd05594 154 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRT----L---------S 220 (325)
T ss_pred ccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhcCCCCCCCC----C---------C
Confidence 23469999999999999999999999999999999999999998655433322222222111111 1 1
Q ss_pred HHHHHHHHHccCCCCCCCC-----CHHHHHHHHh
Q 002278 857 RKTFQLALLCTKRYPSERP-----TMQEVARVLV 885 (943)
Q Consensus 857 ~~l~~l~~~cl~~dP~~RP-----t~~el~~~L~ 885 (943)
..+.+++.+|++.||++|+ ++.++++|-+
T Consensus 221 ~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~ 254 (325)
T cd05594 221 PEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQHKF 254 (325)
T ss_pred HHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcCCC
Confidence 3567899999999999996 8999998753
No 77
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-39 Score=320.32 Aligned_cols=251 Identities=23% Similarity=0.343 Sum_probs=212.9
Q ss_pred hccccceEEeeeceEEEEEEEec-CCceEEEEEecccCcccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEEc
Q 002278 616 ENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYM 694 (943)
Q Consensus 616 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 694 (943)
+-|.+...+|+|+||.||+|.++ .|+.+|+|++.. ....+++.+|+.++++++.|+||++||.+......+||||||
T Consensus 33 EVFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV--~sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYC 110 (502)
T KOG0574|consen 33 EVFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPV--DTDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYC 110 (502)
T ss_pred HHHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCc--cchHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhc
Confidence 45667778999999999999987 578899999854 456789999999999999999999999999999999999999
Q ss_pred cCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCCc
Q 002278 695 VNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPH 774 (943)
Q Consensus 695 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~~ 774 (943)
..|++.|+++. +..++.+.++..+++..++||+|||.. .-+|||||+.|||++-+|++|++|||.|-.+.+...
T Consensus 111 GAGSiSDI~R~--R~K~L~E~EIs~iL~~TLKGL~YLH~~---~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMA- 184 (502)
T KOG0574|consen 111 GAGSISDIMRA--RRKPLSEQEISAVLRDTLKGLQYLHDL---KKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMA- 184 (502)
T ss_pred CCCcHHHHHHH--hcCCccHHHHHHHHHHHHhHHHHHHHH---HHHHhhcccccEEEcccchhhhhhccccchhhhhHH-
Confidence 99999999974 456799999999999999999999998 889999999999999999999999999987755433
Q ss_pred eeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccccCccCHH
Q 002278 775 ASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLS 854 (943)
Q Consensus 775 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 854 (943)
.+..++||+.|||||++..-.|+.++||||+|++..||..|++||.+..++.....+ +...+|.+.. ...
T Consensus 185 KRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFMI-------PT~PPPTF~K---PE~ 254 (502)
T KOG0574|consen 185 KRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFMI-------PTKPPPTFKK---PEE 254 (502)
T ss_pred hhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeEec-------cCCCCCCCCC---hHh
Confidence 345578999999999999999999999999999999999999999876554322221 1222233321 122
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 002278 855 AVRKTFQLALLCTKRYPSERPTMQEVARVL 884 (943)
Q Consensus 855 ~~~~l~~l~~~cl~~dP~~RPt~~el~~~L 884 (943)
....+.++++.|+-+.|++|.|+.++++|-
T Consensus 255 WS~~F~DFi~~CLiK~PE~R~TA~~L~~H~ 284 (502)
T KOG0574|consen 255 WSSEFNDFIRSCLIKKPEERKTALRLCEHT 284 (502)
T ss_pred hhhHHHHHHHHHhcCCHHHHHHHHHHhhhh
Confidence 345778999999999999999999999985
No 78
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=5e-37 Score=340.43 Aligned_cols=251 Identities=22% Similarity=0.275 Sum_probs=200.2
Q ss_pred ccccceEEeeeceEEEEEEEec----CCceEEEEEecccC----cccHHHHHHHHHHHhcCC-CCCcceeeeEEecCCcc
Q 002278 617 NLSEKYIVGYGASSTVYKCALK----NSRPIAVKKLYNQY----PHNLREFETELETIGSIR-HRNIVSLHGYALSPYGN 687 (943)
Q Consensus 617 ~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~ 687 (943)
+|+..+.||+|+||.||+|+.. .++.||+|++.+.. ....+.+.+|+++++.++ ||+|+++++++..++..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 4778899999999999999863 47889999986432 223456788999999995 89999999999999999
Q ss_pred eEEEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccc
Q 002278 688 LLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARC 767 (943)
Q Consensus 688 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~ 767 (943)
++||||+++|+|.+++. ....+++.++..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 81 ~lv~e~~~~g~L~~~l~---~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nili~~~~~~kl~DfG~~~~ 154 (332)
T cd05614 81 HLILDYVSGGEMFTHLY---QRDNFSEDEVRFYSGEIILALEHLHKL---GIVYRDIKLENILLDSEGHVVLTDFGLSKE 154 (332)
T ss_pred EEEEeCCCCCcHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHeEECCCCCEEEeeCcCCcc
Confidence 99999999999999986 345689999999999999999999999 999999999999999999999999999986
Q ss_pred cCCCCCceeeeEecccceeCccccccC-CCCCcchhhhHHHHHHHHHhCCCCCCCCc---cHHHHHHHhccccccccccC
Q 002278 768 IPTAMPHASTFVLGTIGYIDPEYAHTS-RLNEKSDVYSFGIVLLEILTGKKAVDNES---NLHQLIMSKADDNTVMEAVD 843 (943)
Q Consensus 768 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvil~elltG~~p~~~~~---~~~~~~~~~~~~~~~~~~~~ 843 (943)
+............||+.|+|||++.+. .++.++|||||||++|||+||+.||.... ........... .+
T Consensus 155 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~-------~~ 227 (332)
T cd05614 155 FLSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILK-------CD 227 (332)
T ss_pred ccccCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhc-------CC
Confidence 544333333345699999999998865 47899999999999999999999996432 12222111111 11
Q ss_pred cccccCccCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHHHh
Q 002278 844 PEVSVTCVDLSAVRKTFQLALLCTKRYPSERP-----TMQEVARVLV 885 (943)
Q Consensus 844 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~el~~~L~ 885 (943)
+.++.. ....+.+++.+|++.||++|| +++++++|-+
T Consensus 228 ~~~~~~-----~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~ 269 (332)
T cd05614 228 PPFPSF-----IGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPF 269 (332)
T ss_pred CCCCCC-----CCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCCC
Confidence 111111 114567899999999999999 7889988754
No 79
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=5.6e-37 Score=344.57 Aligned_cols=259 Identities=24% Similarity=0.358 Sum_probs=204.6
Q ss_pred hhccccceEEeeeceEEEEEEEec------CCceEEEEEecccC-cccHHHHHHHHHHHhcC-CCCCcceeeeEEecCCc
Q 002278 615 TENLSEKYIVGYGASSTVYKCALK------NSRPIAVKKLYNQY-PHNLREFETELETIGSI-RHRNIVSLHGYALSPYG 686 (943)
Q Consensus 615 ~~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 686 (943)
.++|+..+.||+|+||.||+|.+. .+..||||++.... ....+.+.+|+++++.+ +||||+++++++.+.+.
T Consensus 34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~ 113 (375)
T cd05104 34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGP 113 (375)
T ss_pred hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCc
Confidence 457889999999999999999742 35679999986433 23445788999999999 89999999999999999
Q ss_pred ceEEEEEccCCChhhhccCCCC----------------------------------------------------------
Q 002278 687 NLLFYDYMVNGSLWDLLHGPSK---------------------------------------------------------- 708 (943)
Q Consensus 687 ~~lv~e~~~~g~L~~~l~~~~~---------------------------------------------------------- 708 (943)
.++||||+++|+|.++++....
T Consensus 114 ~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (375)
T cd05104 114 TLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGS 193 (375)
T ss_pred ceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccce
Confidence 9999999999999998853211
Q ss_pred --------------CccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCCc
Q 002278 709 --------------KVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPH 774 (943)
Q Consensus 709 --------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~~ 774 (943)
...+++..+.+++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++........
T Consensus 194 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~ 270 (375)
T cd05104 194 YIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNY 270 (375)
T ss_pred ecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCchhhEEEECCCcEEEecCccceeccCcccc
Confidence 12478899999999999999999998 9999999999999999999999999999866433221
Q ss_pred e-eeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCccHHHHHHHhccccccccccCcccccCccC
Q 002278 775 A-STFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVD 852 (943)
Q Consensus 775 ~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 852 (943)
. .....++..|+|||++.+..++.++|||||||++|||++ |..||................... ..+..
T Consensus 271 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~~------ 341 (375)
T cd05104 271 VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEGYRM---LSPEC------ 341 (375)
T ss_pred cccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHhCccC---CCCCC------
Confidence 1 111234668999999999999999999999999999998 899997654333322222211110 01111
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhc
Q 002278 853 LSAVRKTFQLALLCTKRYPSERPTMQEVARVLVSL 887 (943)
Q Consensus 853 ~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~~ 887 (943)
....+.+++..||+.||++||++.++++.|+..
T Consensus 342 --~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~~ 374 (375)
T cd05104 342 --APSEMYDIMKSCWDADPLKRPTFKQIVQLIEQQ 374 (375)
T ss_pred --CCHHHHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence 124678999999999999999999999999853
No 80
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=1.7e-36 Score=324.32 Aligned_cols=256 Identities=28% Similarity=0.416 Sum_probs=209.3
Q ss_pred HhhccccceEEeeeceEEEEEEEecCCceEEEEEecccCcccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEE
Q 002278 614 STENLSEKYIVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDY 693 (943)
Q Consensus 614 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 693 (943)
..++|+..+.||+|++|.||+|...+++.||+|.+.... ...+.+.+|++++++++||||+++++++...+..+++|||
T Consensus 4 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 82 (261)
T cd05068 4 DRTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGT-MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTEL 82 (261)
T ss_pred chhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCc-ccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeec
Confidence 346788899999999999999998878889999986543 3457789999999999999999999999999999999999
Q ss_pred ccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCC
Q 002278 694 MVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMP 773 (943)
Q Consensus 694 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~ 773 (943)
+++++|.+++.... ...+++..+..++.|++.|++|||+. +|+||||||+||++++++.+||+|||+++.......
T Consensus 83 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~ 158 (261)
T cd05068 83 MKYGSLLEYLQGGA-GRALKLPQLIDMAAQVASGMAYLEAQ---NYIHRDLAARNVLVGENNICKVADFGLARVIKEDIY 158 (261)
T ss_pred ccCCcHHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCcceEEEcCCCCEEECCcceEEEccCCcc
Confidence 99999999986432 34689999999999999999999999 999999999999999999999999999987753322
Q ss_pred ceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCccHHHHHHHhccccccccccCcccccCccC
Q 002278 774 HASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVD 852 (943)
Q Consensus 774 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 852 (943)
.......++..|+|||+..+..++.++||||||+++|||+| |+.||.+............ .... ...+
T Consensus 159 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~-~~~~--~~~~-------- 227 (261)
T cd05068 159 EAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQ-GYRM--PCPP-------- 227 (261)
T ss_pred cccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHc-CCCC--CCCC--------
Confidence 22222223458999999999999999999999999999999 9999987654433322221 1111 0111
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhh
Q 002278 853 LSAVRKTFQLALLCTKRYPSERPTMQEVARVLVS 886 (943)
Q Consensus 853 ~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~ 886 (943)
.....+.+++.+|++.+|++||++.++++.|+.
T Consensus 228 -~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~ 260 (261)
T cd05068 228 -GCPKELYDIMLDCWKEDPDDRPTFETLQWKLED 260 (261)
T ss_pred -cCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence 112567889999999999999999999999875
No 81
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=6e-37 Score=343.64 Aligned_cols=254 Identities=22% Similarity=0.281 Sum_probs=199.2
Q ss_pred hccccceEEeeeceEEEEEEEec-CCceEEEEEecccC---cccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEE
Q 002278 616 ENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQY---PHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFY 691 (943)
Q Consensus 616 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 691 (943)
++|+..+.||+|+||+||+|..+ .++.||+|++.+.. ......+.+|+++++.++||||+++++++.+....++||
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence 36888999999999999999876 47899999986532 223456788999999999999999999999999999999
Q ss_pred EEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCC
Q 002278 692 DYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTA 771 (943)
Q Consensus 692 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~ 771 (943)
||+++|+|.+++. ....+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 81 E~~~gg~L~~~l~---~~~~l~~~~~~~~~~qi~~aL~~lH~~---givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~ 154 (363)
T cd05628 81 EFLPGGDMMTLLM---KKDTLTEEETQFYIAETVLAIDSIHQL---GFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKA 154 (363)
T ss_pred cCCCCCcHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCCEEEeeccCccccccc
Confidence 9999999999986 345689999999999999999999999 9999999999999999999999999999765321
Q ss_pred CC----------------------------------ceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCC
Q 002278 772 MP----------------------------------HASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKK 817 (943)
Q Consensus 772 ~~----------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~ 817 (943)
.. ......+||+.|+|||++.+..++.++|||||||++|||++|+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~ 234 (363)
T cd05628 155 HRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYP 234 (363)
T ss_pred ccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCC
Confidence 10 00123469999999999999999999999999999999999999
Q ss_pred CCCCCccHHHHHHHhccccccccccCcccccCccCHHHHHHHHHHHHHcc--CCCCCCCCCHHHHHHHH
Q 002278 818 AVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAVRKTFQLALLCT--KRYPSERPTMQEVARVL 884 (943)
Q Consensus 818 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl--~~dP~~RPt~~el~~~L 884 (943)
||.+................. ..++.... . ....+++.+++ ..++..||++.|+++|-
T Consensus 235 Pf~~~~~~~~~~~i~~~~~~~--~~p~~~~~---s----~~~~~li~~l~~~~~~r~~r~~~~ei~~hp 294 (363)
T cd05628 235 PFCSETPQETYKKVMNWKETL--IFPPEVPI---S----EKAKDLILRFCCEWEHRIGAPGVEEIKTNP 294 (363)
T ss_pred CCCCCCHHHHHHHHHcCcCcc--cCCCcCCC---C----HHHHHHHHHHcCChhhcCCCCCHHHHhCCC
Confidence 998776555444433221111 11111110 1 23344555433 23444679999999874
No 82
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=1.1e-36 Score=325.68 Aligned_cols=255 Identities=27% Similarity=0.400 Sum_probs=208.5
Q ss_pred hhccccceEEeeeceEEEEEEEecCCceEEEEEecccCcccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEEc
Q 002278 615 TENLSEKYIVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYM 694 (943)
Q Consensus 615 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 694 (943)
.++|+..+.||+|+||.||+|...++..||+|++... ....+.+.+|+.+++.++||||+++++++......+++|||+
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 83 (261)
T cd05072 5 RESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPG-TMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYM 83 (261)
T ss_pred hHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCC-chhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecC
Confidence 4678899999999999999999888888999987643 234578899999999999999999999999999999999999
Q ss_pred cCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCCc
Q 002278 695 VNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPH 774 (943)
Q Consensus 695 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~~ 774 (943)
++|+|.+++... ....+++.++..++.|++.|++|||+. +++||||||+||+++.++.++|+|||+++........
T Consensus 84 ~~~~L~~~l~~~-~~~~~~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~ 159 (261)
T cd05072 84 AKGSLLDFLKSD-EGGKVLLPKLIDFSAQIAEGMAYIERK---NYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYT 159 (261)
T ss_pred CCCcHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEecCCCcEEECCCccceecCCCcee
Confidence 999999998643 234688999999999999999999998 9999999999999999999999999999876543222
Q ss_pred eeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCccHHHHHHHhccccccccccCcccccCccCH
Q 002278 775 ASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDL 853 (943)
Q Consensus 775 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 853 (943)
......++..|+|||+..+..++.++|||||||++|||+| |+.||............. ..... +...
T Consensus 160 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~-~~~~~-----~~~~------ 227 (261)
T cd05072 160 AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQ-RGYRM-----PRME------ 227 (261)
T ss_pred ccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHH-cCCCC-----CCCC------
Confidence 2222335678999999998889999999999999999998 999997654433222221 11110 0000
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhh
Q 002278 854 SAVRKTFQLALLCTKRYPSERPTMQEVARVLVS 886 (943)
Q Consensus 854 ~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~ 886 (943)
.....+.+++.+|++.+|++||+++++.+.|+.
T Consensus 228 ~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 260 (261)
T cd05072 228 NCPDELYDIMKTCWKEKAEERPTFDYLQSVLDD 260 (261)
T ss_pred CCCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 112467789999999999999999999999875
No 83
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=5.3e-37 Score=335.67 Aligned_cols=264 Identities=23% Similarity=0.289 Sum_probs=201.6
Q ss_pred hhccccceEEeeeceEEEEEEEec-CCceEEEEEecccCc-ccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEE
Q 002278 615 TENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQYP-HNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYD 692 (943)
Q Consensus 615 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 692 (943)
.++|+..+.||+|+||.||+|..+ +++.||+|++..... .....+.+|+++++.++||||+++++++.++...++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 83 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFE 83 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEE
Confidence 467899999999999999999986 578899999865432 233467789999999999999999999999999999999
Q ss_pred EccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCC
Q 002278 693 YMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAM 772 (943)
Q Consensus 693 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~ 772 (943)
|+. ++|.+++.. ....+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++......
T Consensus 84 ~~~-~~l~~~~~~--~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 157 (303)
T cd07869 84 YVH-TDLCQYMDK--HPGGLHPENVKLFLFQLLRGLSYIHQR---YILHRDLKPQNLLISDTGELKLADFGLARAKSVPS 157 (303)
T ss_pred CCC-cCHHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECCCCcceeccCCC
Confidence 995 678777753 335688999999999999999999999 99999999999999999999999999997553322
Q ss_pred CceeeeEecccceeCcccccc-CCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhcc-cccccccc--------
Q 002278 773 PHASTFVLGTIGYIDPEYAHT-SRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKAD-DNTVMEAV-------- 842 (943)
Q Consensus 773 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~-~~~~~~~~-------- 842 (943)
. ......|++.|+|||++.+ ..++.++||||+||++|||++|+.||.+..+.......... .+......
T Consensus 158 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (303)
T cd07869 158 H-TYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLP 236 (303)
T ss_pred c-cCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhcc
Confidence 1 1223458999999998875 45889999999999999999999999876543322221110 00000000
Q ss_pred --Ccc-cccC-ccCH-------HHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 002278 843 --DPE-VSVT-CVDL-------SAVRKTFQLALLCTKRYPSERPTMQEVARVLV 885 (943)
Q Consensus 843 --~~~-~~~~-~~~~-------~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~ 885 (943)
.++ +... .... .....+.+++..|++.||++|||+.|+++|-+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h~~ 290 (303)
T cd07869 237 HFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSHEY 290 (303)
T ss_pred ccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcCcc
Confidence 000 0000 0000 01135668999999999999999999998754
No 84
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=2.5e-37 Score=340.46 Aligned_cols=242 Identities=24% Similarity=0.303 Sum_probs=197.1
Q ss_pred eEEeeeceEEEEEEEec----CCceEEEEEecccCc--ccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEEcc
Q 002278 622 YIVGYGASSTVYKCALK----NSRPIAVKKLYNQYP--HNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMV 695 (943)
Q Consensus 622 ~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 695 (943)
+.||+|+||.||++... .++.||+|++..... .....+..|++++++++||||+++++++.+++..++||||++
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 81 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR 81 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence 57999999999998752 478899999865432 233456789999999999999999999999999999999999
Q ss_pred CCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCCce
Q 002278 696 NGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHA 775 (943)
Q Consensus 696 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~~~ 775 (943)
+|+|.+++. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....... .
T Consensus 82 ~~~L~~~l~---~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~-~ 154 (318)
T cd05582 82 GGDLFTRLS---KEVMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEK-K 154 (318)
T ss_pred CCcHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHeEECCCCcEEEeeccCCcccCCCCC-c
Confidence 999999986 345689999999999999999999999 999999999999999999999999999986543322 2
Q ss_pred eeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccccCccCHHH
Q 002278 776 STFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSA 855 (943)
Q Consensus 776 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 855 (943)
.....|++.|+|||++.+..++.++|||||||++|||++|+.||..................++. .+
T Consensus 155 ~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~~~~~~~p~----~~--------- 221 (318)
T cd05582 155 AYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKAKLGMPQ----FL--------- 221 (318)
T ss_pred eecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHHcCCCCCCC----CC---------
Confidence 23356899999999999988999999999999999999999999876554433333222221111 11
Q ss_pred HHHHHHHHHHccCCCCCCCCCH-----HHHHHH
Q 002278 856 VRKTFQLALLCTKRYPSERPTM-----QEVARV 883 (943)
Q Consensus 856 ~~~l~~l~~~cl~~dP~~RPt~-----~el~~~ 883 (943)
...+.+++..|++.||++||++ .+++++
T Consensus 222 ~~~~~~li~~~l~~~P~~R~~a~~~~~~~~~~~ 254 (318)
T cd05582 222 SPEAQSLLRALFKRNPANRLGAGPDGVEEIKRH 254 (318)
T ss_pred CHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhCC
Confidence 1456789999999999999994 555544
No 85
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=6.2e-37 Score=344.71 Aligned_cols=258 Identities=22% Similarity=0.213 Sum_probs=199.7
Q ss_pred hhccccceEEeeeceEEEEEEEec-CCceEEEEEecccCcccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEE
Q 002278 615 TENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDY 693 (943)
Q Consensus 615 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 693 (943)
..+|+..+.||+|+||.||+|.+. .++.||+|+... ..+.+|++++++++|||||++++++......++|+|+
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~------~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~ 164 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR------GGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPR 164 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh------hhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEec
Confidence 357999999999999999999976 578899997532 4567899999999999999999999999999999999
Q ss_pred ccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCC
Q 002278 694 MVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMP 773 (943)
Q Consensus 694 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~ 773 (943)
+. ++|.+++. ....+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+|+.......
T Consensus 165 ~~-~~L~~~l~---~~~~l~~~~~~~i~~qi~~aL~ylH~~---~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~ 237 (391)
T PHA03212 165 YK-TDLYCYLA---AKRNIAICDILAIERSVLRAIQYLHEN---RIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINA 237 (391)
T ss_pred CC-CCHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHhEEEcCCCCEEEEeCCcccccccccc
Confidence 84 78888875 334689999999999999999999999 999999999999999999999999999976433322
Q ss_pred ceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCcc-------HHHHHHHhcccccccccc----
Q 002278 774 HASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESN-------LHQLIMSKADDNTVMEAV---- 842 (943)
Q Consensus 774 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~-------~~~~~~~~~~~~~~~~~~---- 842 (943)
.......||+.|+|||++.+..++.++||||+||++|||+||+.||..... ...+.......+..+...
T Consensus 238 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~ 317 (391)
T PHA03212 238 NKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDA 317 (391)
T ss_pred cccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcch
Confidence 233345699999999999999999999999999999999999988753221 111111111111100000
Q ss_pred -----------------CcccccCcc-CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 002278 843 -----------------DPEVSVTCV-DLSAVRKTFQLALLCTKRYPSERPTMQEVARVLV 885 (943)
Q Consensus 843 -----------------~~~~~~~~~-~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~ 885 (943)
.+.....+. .......+.+++.+|++.||++|||+.|++++-+
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~ 378 (391)
T PHA03212 318 QANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDFAA 378 (391)
T ss_pred hHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcChh
Confidence 000000000 0122356788999999999999999999998765
No 86
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=5.4e-37 Score=344.30 Aligned_cols=261 Identities=25% Similarity=0.362 Sum_probs=205.1
Q ss_pred HhhccccceEEeeeceEEEEEEEec------CCceEEEEEecccC-cccHHHHHHHHHHHhcC-CCCCcceeeeEEecCC
Q 002278 614 STENLSEKYIVGYGASSTVYKCALK------NSRPIAVKKLYNQY-PHNLREFETELETIGSI-RHRNIVSLHGYALSPY 685 (943)
Q Consensus 614 ~~~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 685 (943)
..++|+..+.||+|+||.||+|.+. ++..||+|++.... ......+.+|+++++.+ +|||||++++++...+
T Consensus 36 ~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~ 115 (374)
T cd05106 36 PRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGG 115 (374)
T ss_pred cHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCC
Confidence 4568899999999999999999853 23579999986543 33345688999999999 8999999999999999
Q ss_pred cceEEEEEccCCChhhhccCCC----------------------------------------------------------
Q 002278 686 GNLLFYDYMVNGSLWDLLHGPS---------------------------------------------------------- 707 (943)
Q Consensus 686 ~~~lv~e~~~~g~L~~~l~~~~---------------------------------------------------------- 707 (943)
..++||||+++|+|.+++....
T Consensus 116 ~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (374)
T cd05106 116 PVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSS 195 (374)
T ss_pred CeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccccccc
Confidence 9999999999999999875311
Q ss_pred ---------CCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCCce-ee
Q 002278 708 ---------KKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHA-ST 777 (943)
Q Consensus 708 ---------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~~~-~~ 777 (943)
...++++.++.+++.|++.||+|||++ +|+||||||+||++++++.+||+|||+++......... ..
T Consensus 196 ~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~ 272 (374)
T cd05106 196 DSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASK---NCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKG 272 (374)
T ss_pred cccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeecc
Confidence 112478899999999999999999999 99999999999999999999999999998654332211 11
Q ss_pred eEecccceeCccccccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCccHHHHHHHhccccccccccCcccccCccCHHHH
Q 002278 778 FVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAV 856 (943)
Q Consensus 778 ~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 856 (943)
...++..|+|||++.+..++.++|||||||++|||++ |+.||................. .+..+.. ..
T Consensus 273 ~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~~~~------~~~~~~~-----~~ 341 (374)
T cd05106 273 NARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKRGY------QMSRPDF-----AP 341 (374)
T ss_pred CCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHHccc------CccCCCC-----CC
Confidence 1234568999999998899999999999999999997 9999976543222222221111 1111100 12
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHHHHhhcC
Q 002278 857 RKTFQLALLCTKRYPSERPTMQEVARVLVSLL 888 (943)
Q Consensus 857 ~~l~~l~~~cl~~dP~~RPt~~el~~~L~~~~ 888 (943)
..+.+++..||+.||++|||+.++++.|+.+.
T Consensus 342 ~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 342 PEIYSIMKMCWNLEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence 46778999999999999999999999998753
No 87
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=6.7e-37 Score=337.89 Aligned_cols=246 Identities=20% Similarity=0.267 Sum_probs=197.9
Q ss_pred cccceEEeeeceEEEEEEEec-CCceEEEEEecccC---cccHHHHHHHHHHH---hcCCCCCcceeeeEEecCCcceEE
Q 002278 618 LSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQY---PHNLREFETELETI---GSIRHRNIVSLHGYALSPYGNLLF 690 (943)
Q Consensus 618 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l---~~l~h~niv~l~~~~~~~~~~~lv 690 (943)
|++.+.||+|+||.||+|.++ +++.||+|++.... ....+.+.+|++++ +.++||||+++++++......++|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 567789999999999999976 57899999986432 22344566666654 566899999999999999999999
Q ss_pred EEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCC
Q 002278 691 YDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPT 770 (943)
Q Consensus 691 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~ 770 (943)
|||+++|+|..++. ...+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++....
T Consensus 81 ~E~~~~~~L~~~~~----~~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~ 153 (324)
T cd05589 81 MEYAAGGDLMMHIH----TDVFSEPRAVFYAACVVLGLQYLHEN---KIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMG 153 (324)
T ss_pred EcCCCCCcHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCcEEeCcccCCccCCC
Confidence 99999999998885 34689999999999999999999999 999999999999999999999999999875432
Q ss_pred CCCceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccccCc
Q 002278 771 AMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTC 850 (943)
Q Consensus 771 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 850 (943)
.. .......|++.|+|||++.+..++.++|||||||++|||++|+.||.+.................+ +.+
T Consensus 154 ~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~~~p----~~~---- 224 (324)
T cd05589 154 FG-DRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVNDEVRYP----RFL---- 224 (324)
T ss_pred CC-CcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC----CCC----
Confidence 21 122335699999999999999999999999999999999999999987654433322222211111 111
Q ss_pred cCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHHH
Q 002278 851 VDLSAVRKTFQLALLCTKRYPSERP-----TMQEVARVL 884 (943)
Q Consensus 851 ~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~el~~~L 884 (943)
...+.+++.+|++.||++|| ++.+++++-
T Consensus 225 -----~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~~ 258 (324)
T cd05589 225 -----SREAISIMRRLLRRNPERRLGSGEKDAEDVKKQP 258 (324)
T ss_pred -----CHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhCC
Confidence 24567899999999999999 678887764
No 88
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=1.6e-36 Score=323.22 Aligned_cols=252 Identities=23% Similarity=0.357 Sum_probs=204.4
Q ss_pred hccccceEEeeeceEEEEEEEecCCceEEEEEecccCcccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEEcc
Q 002278 616 ENLSEKYIVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMV 695 (943)
Q Consensus 616 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 695 (943)
++|+..+.||+|+||+||.|..+++..+|+|.+... ......+.+|+++++.++||||+++++++.+.+..+++|||++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 82 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEG-SMSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMS 82 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCC-cccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCC
Confidence 467888899999999999999887778999988643 3345678999999999999999999999999888999999999
Q ss_pred CCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCCce
Q 002278 696 NGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHA 775 (943)
Q Consensus 696 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~~~ 775 (943)
+|+|.+++... ...+++.+++.++.|++.|++|||+. +++|+||||+||++++++.+||+|||.++.........
T Consensus 83 ~~~l~~~i~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~ 157 (256)
T cd05113 83 NGCLLNYLREH--GKRFQPSQLLEMCKDVCEGMAYLESK---QFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTS 157 (256)
T ss_pred CCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCCEEECCCccceecCCCceee
Confidence 99999998642 23689999999999999999999999 99999999999999999999999999998664332211
Q ss_pred eeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCccHHHHHHHhccccccccccCcccccCccCHH
Q 002278 776 STFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLS 854 (943)
Q Consensus 776 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 854 (943)
.....++..|+|||...+..++.++|||||||++|||++ |+.||................... .+..
T Consensus 158 ~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~----~~~~-------- 225 (256)
T cd05113 158 SVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQGLRLY----RPHL-------- 225 (256)
T ss_pred cCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHhcCCCCC----CCCC--------
Confidence 112235678999999998889999999999999999999 999997655433222222111110 0100
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 002278 855 AVRKTFQLALLCTKRYPSERPTMQEVARVLV 885 (943)
Q Consensus 855 ~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~ 885 (943)
....+.+++..||+.+|++||++.++++.++
T Consensus 226 ~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 226 ASEKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred CCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 1256789999999999999999999998763
No 89
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=3.7e-37 Score=341.13 Aligned_cols=255 Identities=20% Similarity=0.219 Sum_probs=205.8
Q ss_pred hccccceEEeeeceEEEEEEEec-CCceEEEEEecccC---cccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEE
Q 002278 616 ENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQY---PHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFY 691 (943)
Q Consensus 616 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 691 (943)
++|+..+.||+|+||+||+|+.+ +++.||+|++.... ....+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence 36888999999999999999976 57889999986542 234456888999999999999999999999999999999
Q ss_pred EEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCC
Q 002278 692 DYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTA 771 (943)
Q Consensus 692 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~ 771 (943)
||+++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 81 e~~~~~~L~~~l~~~--~~~l~~~~~~~~~~qi~~aL~~lH~~---~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~ 155 (330)
T cd05601 81 EYQPGGDLLSLLNRY--EDQFDEDMAQFYLAELVLAIHSVHQM---GYVHRDIKPENVLIDRTGHIKLADFGSAARLTAN 155 (330)
T ss_pred CCCCCCCHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEcccCchHheEECCCCCEEeccCCCCeECCCC
Confidence 999999999998632 34689999999999999999999999 9999999999999999999999999999876544
Q ss_pred CCceeeeEecccceeCccccc------cCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcc
Q 002278 772 MPHASTFVLGTIGYIDPEYAH------TSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPE 845 (943)
Q Consensus 772 ~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 845 (943)
.........||+.|+|||++. +..++.++|||||||++|||++|+.||........+...........-...+.
T Consensus 156 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 235 (330)
T cd05601 156 KMVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQRFLKFPEDPK 235 (330)
T ss_pred CceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcCCCccCCCCCCC
Confidence 333333446899999999986 45678999999999999999999999987655444333222111110000111
Q ss_pred cccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 002278 846 VSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLV 885 (943)
Q Consensus 846 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~ 885 (943)
....+.+++..|++ +|++||++.++++|-+
T Consensus 236 ---------~~~~~~~li~~ll~-~p~~R~t~~~l~~h~~ 265 (330)
T cd05601 236 ---------VSSDFLDLIQSLLC-GQKERLGYEGLCCHPF 265 (330)
T ss_pred ---------CCHHHHHHHHHHcc-ChhhCCCHHHHhCCCC
Confidence 12456788999998 9999999999998743
No 90
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-37 Score=350.67 Aligned_cols=260 Identities=23% Similarity=0.336 Sum_probs=209.8
Q ss_pred hhccccceEEeeeceEEEEEEEecCC-ceEEEEEecccCcccHHHHHHHHHHHhcCC-CCCcceeeeE-Eec------CC
Q 002278 615 TENLSEKYIVGYGASSTVYKCALKNS-RPIAVKKLYNQYPHNLREFETELETIGSIR-HRNIVSLHGY-ALS------PY 685 (943)
Q Consensus 615 ~~~~~~~~~lG~G~~g~Vy~~~~~~~-~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~-~~~------~~ 685 (943)
..++++.++|.+|||+.||.|.+..+ .+||+|++........+.+.+|+++|+.|+ |+|||.+++. ... ..
T Consensus 36 ~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~ 115 (738)
T KOG1989|consen 36 SHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVW 115 (738)
T ss_pred CEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCcee
Confidence 45677889999999999999998766 999999998877778889999999999997 9999999993 321 13
Q ss_pred cceEEEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccc
Q 002278 686 GNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIA 765 (943)
Q Consensus 686 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla 765 (943)
+.++.||||.||.|.|++..+.. ..|.+.++++|++|+++|+++||.. .|+|||||||.+|||+..+|+.||||||.|
T Consensus 116 EvllLmEyC~gg~Lvd~mn~Rlq-~~lte~eVLkIf~dv~~AVa~mH~~-~pPiIHRDLKiENvLls~~g~~KLCDFGSa 193 (738)
T KOG1989|consen 116 EVLLLMEYCKGGSLVDFMNTRLQ-TRLTEDEVLKIFYDVCEAVAAMHYL-KPPIIHRDLKIENVLLSADGNYKLCDFGSA 193 (738)
T ss_pred EEEeehhhccCCcHHHHHHHHHh-ccCChHHHHHHHHHHHHHHHHHhcC-CCccchhhhhhhheEEcCCCCEEeCccccc
Confidence 56899999999999999975433 3499999999999999999999985 788999999999999999999999999999
Q ss_pred cccCCCCCc--e------eeeEecccceeCcccc---ccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhcc
Q 002278 766 RCIPTAMPH--A------STFVLGTIGYIDPEYA---HTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKAD 834 (943)
Q Consensus 766 ~~~~~~~~~--~------~~~~~gt~~y~aPE~~---~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~ 834 (943)
.-.-..... . .-....|+-|+|||.+ .+.+.++|+|||||||+||-|+....||+......
T Consensus 194 tt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~la-------- 265 (738)
T KOG1989|consen 194 TTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKLA-------- 265 (738)
T ss_pred ccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCccee--------
Confidence 753222111 0 0123469999999965 46789999999999999999999999998654321
Q ss_pred ccccccccCcccccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcCCCC
Q 002278 835 DNTVMEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLVSLLPAP 891 (943)
Q Consensus 835 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~~~~~~ 891 (943)
.+...+.... .......+.+||+.||+++|.+||++-+|+..+..+...+
T Consensus 266 ------Ilng~Y~~P~-~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~~ 315 (738)
T KOG1989|consen 266 ------ILNGNYSFPP-FPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANKP 315 (738)
T ss_pred ------EEeccccCCC-CccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcCC
Confidence 1111111111 1134467889999999999999999999999998776554
No 91
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=6.4e-37 Score=338.06 Aligned_cols=247 Identities=19% Similarity=0.261 Sum_probs=200.2
Q ss_pred ccccceEEeeeceEEEEEEEecC-CceEEEEEecccC---cccHHHHHHHHHHHhcCCC-CCcceeeeEEecCCcceEEE
Q 002278 617 NLSEKYIVGYGASSTVYKCALKN-SRPIAVKKLYNQY---PHNLREFETELETIGSIRH-RNIVSLHGYALSPYGNLLFY 691 (943)
Q Consensus 617 ~~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h-~niv~l~~~~~~~~~~~lv~ 691 (943)
+|+..+.||+|+||.||+|..+. ++.||+|++.... ....+.+..|.++++.+.| ++|+.+++++...+..++||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 47788999999999999999764 6789999986532 2344567889999999976 46888999999999999999
Q ss_pred EEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCC
Q 002278 692 DYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTA 771 (943)
Q Consensus 692 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~ 771 (943)
||+++|+|.+++. ....+++..+..++.|++.||+|||++ +|+||||||+||++++++.+||+|||+++.....
T Consensus 81 E~~~~g~L~~~~~---~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~ 154 (324)
T cd05587 81 EYVNGGDLMYHIQ---QVGKFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFG 154 (324)
T ss_pred cCCCCCcHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEEcCCCCEEEeecCcceecCCC
Confidence 9999999999886 345689999999999999999999999 9999999999999999999999999998754222
Q ss_pred CCceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccccCcc
Q 002278 772 MPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCV 851 (943)
Q Consensus 772 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 851 (943)
. .......||+.|+|||++.+..++.++||||+||++|||+||+.||.+.................+. .+
T Consensus 155 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~~~~~----~~----- 224 (324)
T cd05587 155 G-KTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPK----SL----- 224 (324)
T ss_pred C-CceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCC----CC-----
Confidence 2 2233456999999999999999999999999999999999999999876654433333222211111 11
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCH-----HHHHHH
Q 002278 852 DLSAVRKTFQLALLCTKRYPSERPTM-----QEVARV 883 (943)
Q Consensus 852 ~~~~~~~l~~l~~~cl~~dP~~RPt~-----~el~~~ 883 (943)
...+.+++.+|++.||++|++. .++.+|
T Consensus 225 ----~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h 257 (324)
T cd05587 225 ----SKEAVSICKGLLTKHPAKRLGCGPTGERDIREH 257 (324)
T ss_pred ----CHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 1456789999999999999976 677665
No 92
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=6.3e-37 Score=345.56 Aligned_cols=253 Identities=19% Similarity=0.225 Sum_probs=200.4
Q ss_pred ccccceEEeeeceEEEEEEEec-CCceEEEEEecccC---cccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEE
Q 002278 617 NLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQY---PHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYD 692 (943)
Q Consensus 617 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 692 (943)
.|++.+.||+|+||.||+|+.+ .++.||+|.+.+.. ....+.+.+|+++++.++||||+++++++.+++..++|||
T Consensus 2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E 81 (376)
T cd05598 2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (376)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEEe
Confidence 6888999999999999999976 57889999986432 2234567899999999999999999999999999999999
Q ss_pred EccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCC
Q 002278 693 YMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAM 772 (943)
Q Consensus 693 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~ 772 (943)
|+++|+|.+++. ....+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+|..+....
T Consensus 82 ~~~~g~L~~~i~---~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~ 155 (376)
T cd05598 82 YIPGGDMMSLLI---RLGIFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTH 155 (376)
T ss_pred CCCCCcHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHEEECCCCCEEEEeCCCCccccccc
Confidence 999999999986 345688899999999999999999999 99999999999999999999999999985321000
Q ss_pred ------------------------------------------CceeeeEecccceeCccccccCCCCCcchhhhHHHHHH
Q 002278 773 ------------------------------------------PHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLL 810 (943)
Q Consensus 773 ------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ 810 (943)
........||+.|+|||++.+..++.++|||||||++|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvily 235 (376)
T cd05598 156 DSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILY 235 (376)
T ss_pred cccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceee
Confidence 00011246999999999999999999999999999999
Q ss_pred HHHhCCCCCCCCccHHHHHHHhccccccccccCcccccCccCHHHHHHHHHHHHHccCCCCCCCC---CHHHHHHHHh
Q 002278 811 EILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERP---TMQEVARVLV 885 (943)
Q Consensus 811 elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP---t~~el~~~L~ 885 (943)
||++|+.||.+........................+ ...+.+++.+|+ .+|.+|+ ++.++++|-+
T Consensus 236 ell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~---------s~~~~~li~~l~-~~p~~R~~~~t~~ell~h~~ 303 (376)
T cd05598 236 EMLVGQPPFLADTPAETQLKVINWETTLHIPSQAKL---------SREASDLILRLC-CGAEDRLGKNGADEIKAHPF 303 (376)
T ss_pred ehhhCCCCCCCCCHHHHHHHHhccCccccCCCCCCC---------CHHHHHHHHHHh-cCHhhcCCCCCHHHHhCCCC
Confidence 999999999877654443332221111110000011 134556777765 4999999 9999998854
No 93
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=1.2e-36 Score=341.07 Aligned_cols=261 Identities=21% Similarity=0.234 Sum_probs=205.5
Q ss_pred HHHHHHhhccccceEEeeeceEEEEEEEec-CCceEEEEEecccC---cccHHHHHHHHHHHhcCCCCCcceeeeEEecC
Q 002278 609 DDIMRSTENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQY---PHNLREFETELETIGSIRHRNIVSLHGYALSP 684 (943)
Q Consensus 609 ~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 684 (943)
.++....++|+..+.||+|+||.||+|.++ +++.||+|.+.... ....+.+.+|+.+++.++||||+++++++.++
T Consensus 36 ~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~ 115 (371)
T cd05622 36 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDD 115 (371)
T ss_pred hhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcC
Confidence 334445689999999999999999999987 46788999885421 22334577899999999999999999999999
Q ss_pred CcceEEEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeeccccc
Q 002278 685 YGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGI 764 (943)
Q Consensus 685 ~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGl 764 (943)
...++||||+++|+|.+++.. ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 116 ~~~~lv~Ey~~gg~L~~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NIll~~~~~ikL~DfG~ 188 (371)
T cd05622 116 RYLYMVMEYMPGGDLVNLMSN----YDVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGT 188 (371)
T ss_pred CEEEEEEcCCCCCcHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHEEECCCCCEEEEeCCc
Confidence 999999999999999999852 3578889999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCceeeeEecccceeCccccccC----CCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhcccccccc
Q 002278 765 ARCIPTAMPHASTFVLGTIGYIDPEYAHTS----RLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVME 840 (943)
Q Consensus 765 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~ 840 (943)
++..............||+.|+|||++.+. .++.++||||+||++|||++|+.||...........+........-
T Consensus 189 a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~ 268 (371)
T cd05622 189 CMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTF 268 (371)
T ss_pred eeEcCcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCcccC
Confidence 987654332233345699999999998754 3789999999999999999999999876654444333322111110
Q ss_pred ccCcccccCccCHHHHHHHHHHHHHccCCCCCC--CCCHHHHHHHHh
Q 002278 841 AVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSE--RPTMQEVARVLV 885 (943)
Q Consensus 841 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~--RPt~~el~~~L~ 885 (943)
...+.+ ...+.+++..|+...|.+ ||++.++++|.+
T Consensus 269 ~~~~~~---------s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~~ 306 (371)
T cd05622 269 PDDNDI---------SKEAKNLICAFLTDREVRLGRNGVEEIKRHLF 306 (371)
T ss_pred CCcCCC---------CHHHHHHHHHHcCChhhhcCCCCHHHHhcCcc
Confidence 001111 245567899999844443 789999999875
No 94
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=4.3e-37 Score=338.95 Aligned_cols=244 Identities=20% Similarity=0.271 Sum_probs=199.0
Q ss_pred eEEeeeceEEEEEEEec-CCceEEEEEecccC---cccHHHHHHHHHHHhcC-CCCCcceeeeEEecCCcceEEEEEccC
Q 002278 622 YIVGYGASSTVYKCALK-NSRPIAVKKLYNQY---PHNLREFETELETIGSI-RHRNIVSLHGYALSPYGNLLFYDYMVN 696 (943)
Q Consensus 622 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 696 (943)
+.||+|+||.||+|+.+ .++.||+|.+.... ....+.+..|.++++.+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 35899999999999976 46889999986532 23345677888888866 799999999999999999999999999
Q ss_pred CChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCCcee
Q 002278 697 GSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHAS 776 (943)
Q Consensus 697 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~~~~ 776 (943)
|+|.+.+. ....+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++....... ..
T Consensus 81 ~~L~~~l~---~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~-~~ 153 (321)
T cd05591 81 GDLMFQIQ---RSRKFDEPRSRFYAAEVTLALMFLHRH---GVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGV-TT 153 (321)
T ss_pred CcHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeecccceecccCCc-cc
Confidence 99999886 345689999999999999999999999 999999999999999999999999999975432222 22
Q ss_pred eeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccccCccCHHHH
Q 002278 777 TFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAV 856 (943)
Q Consensus 777 ~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 856 (943)
....||+.|+|||++.+..++.++||||+||++|||++|+.||...................+.. + .
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~p~~----~---------~ 220 (321)
T cd05591 154 TTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHDDVLYPVW----L---------S 220 (321)
T ss_pred cccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCC----C---------C
Confidence 33568999999999999999999999999999999999999998776544443333222111111 1 1
Q ss_pred HHHHHHHHHccCCCCCCCC-------CHHHHHHHHh
Q 002278 857 RKTFQLALLCTKRYPSERP-------TMQEVARVLV 885 (943)
Q Consensus 857 ~~l~~l~~~cl~~dP~~RP-------t~~el~~~L~ 885 (943)
..+.+++..|++.||++|| ++.++++|-+
T Consensus 221 ~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~hp~ 256 (321)
T cd05591 221 KEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQHPF 256 (321)
T ss_pred HHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcCCc
Confidence 4567899999999999999 8888988743
No 95
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1e-37 Score=332.81 Aligned_cols=266 Identities=25% Similarity=0.361 Sum_probs=220.8
Q ss_pred HHHHHHhhccccceEEeeeceEEEEEEEecC-CceEEEEEecccCcccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcc
Q 002278 609 DDIMRSTENLSEKYIVGYGASSTVYKCALKN-SRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYALSPYGN 687 (943)
Q Consensus 609 ~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 687 (943)
++......+....++||-|.||.||.|.|+. .-.||||.++.. ....++|.+|+.+|+.++|||+|+++|+|......
T Consensus 260 DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKED-tMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPF 338 (1157)
T KOG4278|consen 260 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPF 338 (1157)
T ss_pred chhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhc-chhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCe
Confidence 3444455667788999999999999999874 678999998654 45678999999999999999999999999999999
Q ss_pred eEEEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccc
Q 002278 688 LLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARC 767 (943)
Q Consensus 688 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~ 767 (943)
|||.|||..|+|.|+|++. .+..++.-..++||.||+.|++||..+ ++|||||.++|+|+.++..||++|||+++.
T Consensus 339 YIiTEfM~yGNLLdYLRec-nr~ev~avvLlyMAtQIsSaMeYLEkk---nFIHRDLAARNCLVgEnhiVKvADFGLsRl 414 (1157)
T KOG4278|consen 339 YIITEFMCYGNLLDYLREC-NRSEVPAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHIVKVADFGLSRL 414 (1157)
T ss_pred EEEEecccCccHHHHHHHh-chhhcchhHHHHHHHHHHHHHHHHHHh---hhhhhhhhhhhccccccceEEeeccchhhh
Confidence 9999999999999999865 345677778899999999999999999 999999999999999999999999999999
Q ss_pred cCCCCCceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCccHHHHHHHhccccccccccCccc
Q 002278 768 IPTAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKADDNTVMEAVDPEV 846 (943)
Q Consensus 768 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 846 (943)
+..+.........-.+.|.|||-+....++.|+|||+|||+|||+.| |..||.+.+- .+.........
T Consensus 415 MtgDTYTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidl-SqVY~LLEkgy---------- 483 (1157)
T KOG4278|consen 415 MTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDL-SQVYGLLEKGY---------- 483 (1157)
T ss_pred hcCCceecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccH-HHHHHHHhccc----------
Confidence 97665554444445778999999999999999999999999999999 9999987543 22222222211
Q ss_pred ccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcCCCC
Q 002278 847 SVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLVSLLPAP 891 (943)
Q Consensus 847 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~~~~~~ 891 (943)
..+. ...++.+++++|+.||++.|.+||++.|+-+.++.+....
T Consensus 484 RM~~-PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf~~s 527 (1157)
T KOG4278|consen 484 RMDG-PEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMFSSS 527 (1157)
T ss_pred cccC-CCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHhccc
Confidence 1111 1134468889999999999999999999999988776543
No 96
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=1.4e-36 Score=324.99 Aligned_cols=257 Identities=26% Similarity=0.400 Sum_probs=212.7
Q ss_pred HHhhccccceEEeeeceEEEEEEEecCCceEEEEEecccCcccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEE
Q 002278 613 RSTENLSEKYIVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYD 692 (943)
Q Consensus 613 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 692 (943)
++..+|+..+.||.|+||.||+|..++++.+|+|.+..........+.+|+++++.++||||+++++++.+....++|||
T Consensus 3 ~~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 82 (261)
T cd05148 3 RPREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITE 82 (261)
T ss_pred CcHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEe
Confidence 34567888999999999999999998889999999877655566789999999999999999999999999999999999
Q ss_pred EccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCC
Q 002278 693 YMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAM 772 (943)
Q Consensus 693 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~ 772 (943)
|+++|+|.+++.... ...+++.++..++.|++.|++|||+. +++||||||+||++++++.+||+|||.+.......
T Consensus 83 ~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~al~~lH~~---~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~ 158 (261)
T cd05148 83 LMEKGSLLAFLRSPE-GQVLPVASLIDMACQVAEGMAYLEEQ---NSIHRDLAARNILVGEDLVCKVADFGLARLIKEDV 158 (261)
T ss_pred ecccCCHHHHHhcCC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccCcceEEEcCCceEEEccccchhhcCCcc
Confidence 999999999997432 34689999999999999999999999 99999999999999999999999999998764432
Q ss_pred CceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCccHHHHHHHhccccccccccCcccccCcc
Q 002278 773 PHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCV 851 (943)
Q Consensus 773 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 851 (943)
... ....++..|+|||...+..++.++||||||+++|+|++ |+.||............... .. +....
T Consensus 159 ~~~-~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~-~~------~~~~~--- 227 (261)
T cd05148 159 YLS-SDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQITAG-YR------MPCPA--- 227 (261)
T ss_pred ccc-cCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHhC-Cc------CCCCC---
Confidence 221 12335778999999998899999999999999999998 89999765543333222211 11 11111
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhh
Q 002278 852 DLSAVRKTFQLALLCTKRYPSERPTMQEVARVLVS 886 (943)
Q Consensus 852 ~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~ 886 (943)
.....+.+++.+|++.||++|||+.++++.|+.
T Consensus 228 --~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~ 260 (261)
T cd05148 228 --KCPQEIYKIMLECWAAEPEDRPSFKALREELDN 260 (261)
T ss_pred --CCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhc
Confidence 112467799999999999999999999999875
No 97
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=2.5e-36 Score=331.63 Aligned_cols=242 Identities=21% Similarity=0.294 Sum_probs=194.2
Q ss_pred eEEeeeceEEEEEEEecC-CceEEEEEecccC---cccHHHHHHHHHHHhc-CCCCCcceeeeEEecCCcceEEEEEccC
Q 002278 622 YIVGYGASSTVYKCALKN-SRPIAVKKLYNQY---PHNLREFETELETIGS-IRHRNIVSLHGYALSPYGNLLFYDYMVN 696 (943)
Q Consensus 622 ~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~---~~~~~~~~~E~~~l~~-l~h~niv~l~~~~~~~~~~~lv~e~~~~ 696 (943)
+.||+|+||.||+|.++. ++.||+|.+.... ....+.+..|..+++. .+||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 369999999999999764 6789999986542 2334556678888876 4899999999999999999999999999
Q ss_pred CChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCCcee
Q 002278 697 GSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHAS 776 (943)
Q Consensus 697 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~~~~ 776 (943)
|+|.+++. ....+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....... ..
T Consensus 81 g~L~~~l~---~~~~~~~~~~~~~~~qi~~al~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~ 153 (316)
T cd05619 81 GDLMFHIQ---SCHKFDLPRATFYAAEIICGLQFLHSK---GIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDA-KT 153 (316)
T ss_pred CcHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEccCCcceECCCCCC-ce
Confidence 99999986 335689999999999999999999999 999999999999999999999999999875422222 22
Q ss_pred eeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccccCccCHHHH
Q 002278 777 TFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAV 856 (943)
Q Consensus 777 ~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 856 (943)
....||+.|+|||++.+..++.++||||+||++|||++|+.||................. .++.. ..
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~--------~~~~~-----~~ 220 (316)
T cd05619 154 CTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMDNP--------CYPRW-----LT 220 (316)
T ss_pred eeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC--------CCCcc-----CC
Confidence 345699999999999998999999999999999999999999987654332222211111 11110 11
Q ss_pred HHHHHHHHHccCCCCCCCCCHH-HHHHH
Q 002278 857 RKTFQLALLCTKRYPSERPTMQ-EVARV 883 (943)
Q Consensus 857 ~~l~~l~~~cl~~dP~~RPt~~-el~~~ 883 (943)
..+.+++.+|++.||++||++. ++.++
T Consensus 221 ~~~~~li~~~l~~~P~~R~~~~~~l~~h 248 (316)
T cd05619 221 REAKDILVKLFVREPERRLGVKGDIRQH 248 (316)
T ss_pred HHHHHHHHHHhccCHhhcCCChHHHHcC
Confidence 3567899999999999999997 66554
No 98
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=1.3e-36 Score=330.75 Aligned_cols=261 Identities=23% Similarity=0.239 Sum_probs=197.9
Q ss_pred hccccceEEeeeceEEEEEEEec--CCceEEEEEecccC--cccHHHHHHHHHHHhcC---CCCCcceeeeEEec-----
Q 002278 616 ENLSEKYIVGYGASSTVYKCALK--NSRPIAVKKLYNQY--PHNLREFETELETIGSI---RHRNIVSLHGYALS----- 683 (943)
Q Consensus 616 ~~~~~~~~lG~G~~g~Vy~~~~~--~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~----- 683 (943)
.+|+..+.||+|+||+||+|++. +++.||+|++.... ......+.+|+++++.+ +||||+++++++..
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~ 80 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 80 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence 36888999999999999999874 36789999886432 22334566777776665 69999999999853
Q ss_pred CCcceEEEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccc
Q 002278 684 PYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFG 763 (943)
Q Consensus 684 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFG 763 (943)
....++||||+. ++|.+++... ....+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 81 ~~~~~lv~e~~~-~~l~~~~~~~-~~~~~~~~~~~~i~~qi~~aL~~lH~~---~iiH~dlkp~Nil~~~~~~~kl~Dfg 155 (290)
T cd07862 81 ETKLTLVFEHVD-QDLTTYLDKV-PEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFG 155 (290)
T ss_pred CCcEEEEEccCC-CCHHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEcCCCCEEEcccc
Confidence 345789999996 6898888643 234589999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccc-ccc
Q 002278 764 IARCIPTAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVM-EAV 842 (943)
Q Consensus 764 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~-~~~ 842 (943)
+++..... .......|++.|+|||++.+..++.++|||||||++|||++|++||.+.........+........ +..
T Consensus 156 ~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~ 233 (290)
T cd07862 156 LARIYSFQ--MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDW 233 (290)
T ss_pred ceEeccCC--cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhc
Confidence 99876443 222334589999999999988999999999999999999999999987766554443332111100 000
Q ss_pred Cccc-------cc-CccC-----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002278 843 DPEV-------SV-TCVD-----LSAVRKTFQLALLCTKRYPSERPTMQEVARV 883 (943)
Q Consensus 843 ~~~~-------~~-~~~~-----~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~ 883 (943)
+... .. .... ......+.+++.+|++.||++|||+.++++|
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~h 287 (290)
T cd07862 234 PRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 287 (290)
T ss_pred hhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcC
Confidence 0000 00 0000 0112456689999999999999999999876
No 99
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=1.1e-36 Score=339.20 Aligned_cols=262 Identities=23% Similarity=0.312 Sum_probs=198.4
Q ss_pred ccccceEEeeeceEEEEEEEec-CCceEEEEEecccC--cccHHHHHHHHHHHhcCCCCCcceeeeEEecCC-----cce
Q 002278 617 NLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQY--PHNLREFETELETIGSIRHRNIVSLHGYALSPY-----GNL 688 (943)
Q Consensus 617 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~~~ 688 (943)
+|+..+.||+|+||.||+|..+ +++.||+|++.... ......+.+|+++++.++||||+++++++.... ..+
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 4788899999999999999976 57899999986432 233456889999999999999999999886432 369
Q ss_pred EEEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeeccccccccc
Q 002278 689 LFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCI 768 (943)
Q Consensus 689 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~ 768 (943)
+||||+ +++|.+++. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 81 lv~e~~-~~~L~~~l~---~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~ 153 (338)
T cd07859 81 VVFELM-ESDLHQVIK---ANDDLTPEHHQFFLYQLLRALKYIHTA---NVFHRDLKPKNILANADCKLKICDFGLARVA 153 (338)
T ss_pred EEEecC-CCCHHHHHH---hcccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEccCcccccc
Confidence 999999 478988886 344689999999999999999999999 9999999999999999999999999999865
Q ss_pred CCCCC--ceeeeEecccceeCcccccc--CCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccc-----
Q 002278 769 PTAMP--HASTFVLGTIGYIDPEYAHT--SRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVM----- 839 (943)
Q Consensus 769 ~~~~~--~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~----- 839 (943)
..... .......||+.|+|||++.+ ..++.++|||||||++|||+||+.||.+..............+...
T Consensus 154 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (338)
T cd07859 154 FNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETIS 233 (338)
T ss_pred ccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHH
Confidence 32211 11223468999999999876 6789999999999999999999999986654332211111000000
Q ss_pred -----------cccCcccccCc--cCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 002278 840 -----------EAVDPEVSVTC--VDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLV 885 (943)
Q Consensus 840 -----------~~~~~~~~~~~--~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~ 885 (943)
....+...... ........+.+++.+|++.||++|||+.|++++-+
T Consensus 234 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp~ 292 (338)
T cd07859 234 RVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPY 292 (338)
T ss_pred HhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcCch
Confidence 00000000000 00011245678999999999999999999998754
No 100
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=7.7e-37 Score=335.80 Aligned_cols=243 Identities=20% Similarity=0.261 Sum_probs=194.8
Q ss_pred eEEeeeceEEEEEEEec-CCceEEEEEecccC---cccHHHHHHHHHHHhcC-CCCCcceeeeEEecCCcceEEEEEccC
Q 002278 622 YIVGYGASSTVYKCALK-NSRPIAVKKLYNQY---PHNLREFETELETIGSI-RHRNIVSLHGYALSPYGNLLFYDYMVN 696 (943)
Q Consensus 622 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 696 (943)
+.||+|+||.||+|+++ +++.||+|.+.... ....+....|.+++... +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 36999999999999987 57889999986532 23345567788887754 899999999999999999999999999
Q ss_pred CChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCCcee
Q 002278 697 GSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHAS 776 (943)
Q Consensus 697 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~~~~ 776 (943)
|+|.+++. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...... ...
T Consensus 81 g~L~~~i~---~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~ 153 (316)
T cd05620 81 GDLMFHIQ---DKGRFDLYRATFYAAEIVCGLQFLHSK---GIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGD-NRA 153 (316)
T ss_pred CcHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEeCccCCCeecccCC-Cce
Confidence 99999886 345689999999999999999999999 99999999999999999999999999987532222 222
Q ss_pred eeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccccCccCHHHH
Q 002278 777 TFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAV 856 (943)
Q Consensus 777 ~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 856 (943)
....||+.|+|||++.+..++.++||||+||++|||++|+.||................. .++.. ..
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~~~~--------~~~~~-----~~ 220 (316)
T cd05620 154 STFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVDTP--------HYPRW-----IT 220 (316)
T ss_pred eccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC--------CCCCC-----CC
Confidence 345699999999999999999999999999999999999999986654333222221111 11111 11
Q ss_pred HHHHHHHHHccCCCCCCCCCHH-HHHHHH
Q 002278 857 RKTFQLALLCTKRYPSERPTMQ-EVARVL 884 (943)
Q Consensus 857 ~~l~~l~~~cl~~dP~~RPt~~-el~~~L 884 (943)
..+.+++..|++.||++||++. ++.+|-
T Consensus 221 ~~~~~li~~~l~~dP~~R~~~~~~~~~h~ 249 (316)
T cd05620 221 KESKDILEKLFERDPTRRLGVVGNIRGHP 249 (316)
T ss_pred HHHHHHHHHHccCCHHHcCCChHHHHcCC
Confidence 3567899999999999999974 666553
No 101
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=7.8e-37 Score=344.77 Aligned_cols=254 Identities=21% Similarity=0.224 Sum_probs=201.1
Q ss_pred hccccceEEeeeceEEEEEEEec-CCceEEEEEecccC---cccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEE
Q 002278 616 ENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQY---PHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFY 691 (943)
Q Consensus 616 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 691 (943)
++|+..+.||+|+||+||+|..+ +++.||+|++.... ....+.+.+|+++++.++||||+++++++.++...++||
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence 36888999999999999999875 57899999986432 233456788999999999999999999999999999999
Q ss_pred EEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCC
Q 002278 692 DYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTA 771 (943)
Q Consensus 692 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~ 771 (943)
||+++|+|.+++. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.+...
T Consensus 81 E~~~gg~L~~~l~---~~~~~~~~~~~~~~~ql~~aL~~LH~~---givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~ 154 (377)
T cd05629 81 EFLPGGDLMTMLI---KYDTFSEDVTRFYMAECVLAIEAVHKL---GFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQ 154 (377)
T ss_pred eCCCCCcHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEEeecccccccccc
Confidence 9999999999986 345688999999999999999999999 9999999999999999999999999999643211
Q ss_pred CCc----------------------------------------------eeeeEecccceeCccccccCCCCCcchhhhH
Q 002278 772 MPH----------------------------------------------ASTFVLGTIGYIDPEYAHTSRLNEKSDVYSF 805 (943)
Q Consensus 772 ~~~----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSl 805 (943)
... .....+||+.|+|||++.+..++.++||||+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSl 234 (377)
T cd05629 155 HDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSL 234 (377)
T ss_pred cccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEec
Confidence 000 0012359999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccccCccCHHHHHHHHHHHHHccCCCCCCC---CCHHHHHH
Q 002278 806 GIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSER---PTMQEVAR 882 (943)
Q Consensus 806 Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~R---Pt~~el~~ 882 (943)
||++|||+||+.||........+..+........ .|... .....+.+++..|+. +|.+| +++.+++.
T Consensus 235 Gvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~---~p~~~------~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~ 304 (377)
T cd05629 235 GAIMFECLIGWPPFCSENSHETYRKIINWRETLY---FPDDI------HLSVEAEDLIRRLIT-NAENRLGRGGAHEIKS 304 (377)
T ss_pred chhhhhhhcCCCCCCCCCHHHHHHHHHccCCccC---CCCCC------CCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhc
Confidence 9999999999999987665444333322111110 01100 011356688999997 66664 69999999
Q ss_pred HHh
Q 002278 883 VLV 885 (943)
Q Consensus 883 ~L~ 885 (943)
|-+
T Consensus 305 hp~ 307 (377)
T cd05629 305 HPF 307 (377)
T ss_pred CCC
Confidence 864
No 102
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=1.7e-36 Score=338.79 Aligned_cols=249 Identities=27% Similarity=0.408 Sum_probs=195.3
Q ss_pred hccccceEEeeeceEEEEEEEec-CCceEEEEEecccCc-ccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEE
Q 002278 616 ENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQYP-HNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDY 693 (943)
Q Consensus 616 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 693 (943)
++|+..+.||+|+||.||+|++. +++.||+|++..... .....+.+|+++++.++|+||+++++++...+..++||||
T Consensus 74 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 153 (353)
T PLN00034 74 SELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEF 153 (353)
T ss_pred HHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEec
Confidence 45566788999999999999976 578999999865432 3346788999999999999999999999999999999999
Q ss_pred ccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCC
Q 002278 694 MVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMP 773 (943)
Q Consensus 694 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~ 773 (943)
+++|+|.+.. ...+..+..++.||+.||+|||+. +|+||||||+||++++++.+||+|||+++.......
T Consensus 154 ~~~~~L~~~~-------~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~ 223 (353)
T PLN00034 154 MDGGSLEGTH-------IADEQFLADVARQILSGIAYLHRR---HIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMD 223 (353)
T ss_pred CCCCcccccc-------cCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEcccccceecccccc
Confidence 9999986532 356778889999999999999999 999999999999999999999999999987643321
Q ss_pred ceeeeEecccceeCcccccc-----CCCCCcchhhhHHHHHHHHHhCCCCCCCCc--cHHHHHHHhccccccccccCccc
Q 002278 774 HASTFVLGTIGYIDPEYAHT-----SRLNEKSDVYSFGIVLLEILTGKKAVDNES--NLHQLIMSKADDNTVMEAVDPEV 846 (943)
Q Consensus 774 ~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwSlGvil~elltG~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 846 (943)
......||..|+|||++.. ...+.++|||||||++|||++|+.||.... ............. .+..
T Consensus 224 -~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~------~~~~ 296 (353)
T PLN00034 224 -PCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAICMSQ------PPEA 296 (353)
T ss_pred -cccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHhccC------CCCC
Confidence 1223468999999998743 234568999999999999999999997322 1221111111100 1111
Q ss_pred ccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhh
Q 002278 847 SVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLVS 886 (943)
Q Consensus 847 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~ 886 (943)
.. .....+.+++..||+.||++|||+.|+++|-+-
T Consensus 297 ~~-----~~~~~l~~li~~~l~~~P~~Rpt~~ell~hp~~ 331 (353)
T PLN00034 297 PA-----TASREFRHFISCCLQREPAKRWSAMQLLQHPFI 331 (353)
T ss_pred CC-----ccCHHHHHHHHHHccCChhhCcCHHHHhcCccc
Confidence 10 112467899999999999999999999998653
No 103
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=1.1e-36 Score=344.32 Aligned_cols=252 Identities=19% Similarity=0.230 Sum_probs=198.5
Q ss_pred ccccceEEeeeceEEEEEEEec-CCceEEEEEecccC---cccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEE
Q 002278 617 NLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQY---PHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYD 692 (943)
Q Consensus 617 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 692 (943)
.|+..+.||+|+||+||+|+.. +++.||+|++.... ....+.+.+|+++++.++|||||++++++.+++..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 5788999999999999999976 57889999986532 2234568889999999999999999999999999999999
Q ss_pred EccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCC
Q 002278 693 YMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAM 772 (943)
Q Consensus 693 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~ 772 (943)
|+++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.+....
T Consensus 82 ~~~gg~L~~~l~~---~~~~~e~~~~~~~~qi~~al~~lH~~---~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~ 155 (382)
T cd05625 82 YIPGGDMMSLLIR---MGIFPEDLARFYIAELTCAVESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTH 155 (382)
T ss_pred CCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEeECCCCccccccc
Confidence 9999999999863 34688999999999999999999999 99999999999999999999999999975321000
Q ss_pred ----------------------------------------------CceeeeEecccceeCccccccCCCCCcchhhhHH
Q 002278 773 ----------------------------------------------PHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFG 806 (943)
Q Consensus 773 ----------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG 806 (943)
........||+.|+|||++.+..++.++||||+|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG 235 (382)
T cd05625 156 DSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVG 235 (382)
T ss_pred cccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEech
Confidence 0001124689999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccccCccCHHHHHHHHHHHHHccCCCCCCCCC---HHHHHHH
Q 002278 807 IVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPT---MQEVARV 883 (943)
Q Consensus 807 vil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt---~~el~~~ 883 (943)
|++|||++|+.||..........................+ .....+++.+++ .+|++|++ +.++++|
T Consensus 236 vil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~---------s~~~~~li~~l~-~~p~~R~~~~~~~ei~~h 305 (382)
T cd05625 236 VILYEMLVGQPPFLAQTPLETQMKVINWQTSLHIPPQAKL---------SPEASDLIIKLC-RGPEDRLGKNGADEIKAH 305 (382)
T ss_pred HHHHHHHhCCCCCCCCCHHHHHHHHHccCCCcCCCCcccC---------CHHHHHHHHHHc-cCHhHcCCCCCHHHHhcC
Confidence 9999999999999877655444433322111111001111 133456666655 48999987 8888876
Q ss_pred H
Q 002278 884 L 884 (943)
Q Consensus 884 L 884 (943)
-
T Consensus 306 p 306 (382)
T cd05625 306 P 306 (382)
T ss_pred C
Confidence 4
No 104
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=1.5e-36 Score=351.35 Aligned_cols=252 Identities=19% Similarity=0.224 Sum_probs=204.8
Q ss_pred ccccceEEeeeceEEEEEEEecC--CceEEEEEecccCcccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEEc
Q 002278 617 NLSEKYIVGYGASSTVYKCALKN--SRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYM 694 (943)
Q Consensus 617 ~~~~~~~lG~G~~g~Vy~~~~~~--~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 694 (943)
.|...+.||+|+||.||+|.... ++.||+|++..........+.+|+++++.++|||||++++++..++..++||||+
T Consensus 68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~ 147 (478)
T PTZ00267 68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYG 147 (478)
T ss_pred eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECC
Confidence 48889999999999999998653 5678888775544444566788999999999999999999999999999999999
Q ss_pred cCCChhhhccCC-CCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCC
Q 002278 695 VNGSLWDLLHGP-SKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMP 773 (943)
Q Consensus 695 ~~g~L~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~ 773 (943)
++|+|.+++... ....++++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.+.....
T Consensus 148 ~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~ 224 (478)
T PTZ00267 148 SGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSR---KMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVS 224 (478)
T ss_pred CCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCcCHHhEEECCCCcEEEEeCcCceecCCccc
Confidence 999999887532 2345688999999999999999999999 999999999999999999999999999987654322
Q ss_pred -ceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccccCccC
Q 002278 774 -HASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVD 852 (943)
Q Consensus 774 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 852 (943)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||.................. .....
T Consensus 225 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~---~~~~~------- 294 (478)
T PTZ00267 225 LDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLYGKYD---PFPCP------- 294 (478)
T ss_pred cccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC---CCCcc-------
Confidence 1223456999999999999999999999999999999999999999866543333222221111 00111
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002278 853 LSAVRKTFQLALLCTKRYPSERPTMQEVARV 883 (943)
Q Consensus 853 ~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~ 883 (943)
....+.+++..||+.||++||++.+++.+
T Consensus 295 --~s~~~~~li~~~L~~dP~~Rps~~~~l~~ 323 (478)
T PTZ00267 295 --VSSGMKALLDPLLSKNPALRPTTQQLLHT 323 (478)
T ss_pred --CCHHHHHHHHHHhccChhhCcCHHHHHhC
Confidence 11457789999999999999999998754
No 105
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=8.2e-37 Score=325.85 Aligned_cols=249 Identities=33% Similarity=0.513 Sum_probs=194.6
Q ss_pred cceEEeeeceEEEEEEEec-----CCceEEEEEecccCc-ccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEE
Q 002278 620 EKYIVGYGASSTVYKCALK-----NSRPIAVKKLYNQYP-HNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDY 693 (943)
Q Consensus 620 ~~~~lG~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 693 (943)
..+.||.|+||.||+|.++ .+..|+||.+..... ...+.+.+|++.+++++||||++++|++...+..++|+||
T Consensus 3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~ 82 (259)
T PF07714_consen 3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEY 82 (259)
T ss_dssp EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE-
T ss_pred EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccccccccccccc
Confidence 4578999999999999987 246799999965432 3467899999999999999999999999988889999999
Q ss_pred ccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCC
Q 002278 694 MVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMP 773 (943)
Q Consensus 694 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~ 773 (943)
+++|+|.+++... ....+++.++..|+.||+.||+|||+. +++||||+++||++++++.+||+|||+++.......
T Consensus 83 ~~~g~L~~~L~~~-~~~~~~~~~~~~i~~~i~~~l~~Lh~~---~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~ 158 (259)
T PF07714_consen 83 CPGGSLDDYLKSK-NKEPLSEQQRLSIAIQIAEALSYLHSN---NIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSK 158 (259)
T ss_dssp -TTEBHHHHHHHT-CTTTSBHHHHHHHHHHHHHHHHHHHHT---TEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSS
T ss_pred ccccccccccccc-ccccccccccccccccccccccccccc---cccccccccccccccccccccccccccccccccccc
Confidence 9999999999743 235789999999999999999999999 999999999999999999999999999987632211
Q ss_pred -ceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCccHHHHHHHhccccccccccCcccccCcc
Q 002278 774 -HASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCV 851 (943)
Q Consensus 774 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 851 (943)
.......+...|+|||.+.+..++.++||||||+++||+++ |+.||.+..... ........... . .....
T Consensus 159 ~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~-~~~~~~~~~~~-~-~~~~~----- 230 (259)
T PF07714_consen 159 YKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEE-IIEKLKQGQRL-P-IPDNC----- 230 (259)
T ss_dssp EEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHH-HHHHHHTTEET-T-SBTTS-----
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccc-ccccccccccc-e-eccch-----
Confidence 11222346789999999999999999999999999999999 789988764433 32222222111 1 11111
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 002278 852 DLSAVRKTFQLALLCTKRYPSERPTMQEVARVL 884 (943)
Q Consensus 852 ~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L 884 (943)
...+.+++..||+.+|++|||+.++++.|
T Consensus 231 ----~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 231 ----PKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp ----BHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred ----hHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 24678999999999999999999999875
No 106
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=1.1e-36 Score=335.10 Aligned_cols=243 Identities=21% Similarity=0.270 Sum_probs=198.1
Q ss_pred eEEeeeceEEEEEEEec-CCceEEEEEecccC---cccHHHHHHHHHHHhcC-CCCCcceeeeEEecCCcceEEEEEccC
Q 002278 622 YIVGYGASSTVYKCALK-NSRPIAVKKLYNQY---PHNLREFETELETIGSI-RHRNIVSLHGYALSPYGNLLFYDYMVN 696 (943)
Q Consensus 622 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 696 (943)
+.||+|+||+||+|.++ +++.||+|.+.+.. ......+..|.++++.+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 36999999999999976 46789999987542 23445677888888887 699999999999999999999999999
Q ss_pred CChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCCcee
Q 002278 697 GSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHAS 776 (943)
Q Consensus 697 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~~~~ 776 (943)
|+|.+++. ....+++.++..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++...... ...
T Consensus 81 ~~L~~~~~---~~~~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-~~~ 153 (318)
T cd05570 81 GDLMFHIQ---RSGRFDEPRARFYAAEIVLGLQFLHER---GIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGG-VTT 153 (318)
T ss_pred CCHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEccCCCHHHeEECCCCcEEecccCCCeecCcCC-Ccc
Confidence 99999886 344689999999999999999999999 99999999999999999999999999987532222 122
Q ss_pred eeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccccCccCHHHH
Q 002278 777 TFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAV 856 (943)
Q Consensus 777 ~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 856 (943)
....|++.|+|||++.+..++.++||||+||++|||++|+.||...................+ .. ..
T Consensus 154 ~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~~~~~~~----~~---------~~ 220 (318)
T cd05570 154 STFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILEDEVRYP----RW---------LS 220 (318)
T ss_pred cceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCC----Cc---------CC
Confidence 335699999999999999999999999999999999999999986654333322222211111 11 12
Q ss_pred HHHHHHHHHccCCCCCCCCCH-----HHHHHHH
Q 002278 857 RKTFQLALLCTKRYPSERPTM-----QEVARVL 884 (943)
Q Consensus 857 ~~l~~l~~~cl~~dP~~RPt~-----~el~~~L 884 (943)
..+.+++.+||+.||++||++ .+++++-
T Consensus 221 ~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~~ 253 (318)
T cd05570 221 KEAKSILKSFLTKNPEKRLGCLPTGEQDIKGHP 253 (318)
T ss_pred HHHHHHHHHHccCCHHHcCCCCCCCHHHHhcCC
Confidence 456789999999999999999 8888764
No 107
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=1.5e-36 Score=328.78 Aligned_cols=254 Identities=22% Similarity=0.255 Sum_probs=202.7
Q ss_pred ccccceEEeeeceEEEEEEEec-CCceEEEEEecccC---cccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEE
Q 002278 617 NLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQY---PHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYD 692 (943)
Q Consensus 617 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 692 (943)
.|+..+.||+|+||+||++... +++.||+|++.... ......+.+|+++++.++||||+++++++..++..++|||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence 4778899999999999999975 57899999986432 1223456789999999999999999999999999999999
Q ss_pred EccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCC
Q 002278 693 YMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAM 772 (943)
Q Consensus 693 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~ 772 (943)
|+++|+|.+++... ....+++..+..++.|++.|++|||+. +|+||||||+||++++++.++|+|||+++......
T Consensus 81 ~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 156 (285)
T cd05605 81 LMNGGDLKFHIYNM-GNPGFDEERAVFYAAEITCGLEDLHRE---RIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGE 156 (285)
T ss_pred ccCCCcHHHHHHhc-CcCCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHEEECCCCCEEEeeCCCceecCCCC
Confidence 99999999887532 234689999999999999999999999 99999999999999999999999999998764332
Q ss_pred CceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccccCccC
Q 002278 773 PHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVD 852 (943)
Q Consensus 773 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 852 (943)
. .....|++.|+|||++.+..++.++||||+||++|||++|+.||.+......................+.
T Consensus 157 ~--~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~------- 227 (285)
T cd05605 157 T--IRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKEDQEEYSEK------- 227 (285)
T ss_pred c--cccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhhcccccCcc-------
Confidence 2 1234589999999999988999999999999999999999999986543222111111100111111111
Q ss_pred HHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHHHh
Q 002278 853 LSAVRKTFQLALLCTKRYPSERP-----TMQEVARVLV 885 (943)
Q Consensus 853 ~~~~~~l~~l~~~cl~~dP~~RP-----t~~el~~~L~ 885 (943)
....+.+++..|++.||++|| ++.+++++-+
T Consensus 228 --~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~ 263 (285)
T cd05605 228 --FSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAHPF 263 (285)
T ss_pred --cCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcCcC
Confidence 124567899999999999999 8889988743
No 108
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=1.6e-36 Score=327.85 Aligned_cols=249 Identities=19% Similarity=0.220 Sum_probs=196.4
Q ss_pred EeeeceEEEEEEEec-CCceEEEEEecccCc---ccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEEccCCCh
Q 002278 624 VGYGASSTVYKCALK-NSRPIAVKKLYNQYP---HNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSL 699 (943)
Q Consensus 624 lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 699 (943)
||+|+||+||+|.++ +++.||+|++..... ...+.+..|+++++.++||||+++.+++......++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 699999999999976 578999999864322 2235677899999999999999999999999999999999999999
Q ss_pred hhhccCC-CCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCCceeee
Q 002278 700 WDLLHGP-SKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTF 778 (943)
Q Consensus 700 ~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~ 778 (943)
.+++... .....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++|+|||+++........ ...
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~-~~~ 156 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQR---RIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSK-TKG 156 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCccceecCCCCcc-ccc
Confidence 8877432 2335689999999999999999999999 9999999999999999999999999999866443222 223
Q ss_pred EecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccccCccCHHHHHH
Q 002278 779 VLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAVRK 858 (943)
Q Consensus 779 ~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 858 (943)
..||+.|+|||++.+..++.++|||||||++|||++|+.||........................+. ....
T Consensus 157 ~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~ 227 (280)
T cd05608 157 YAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILNDSVTYPDK---------FSPA 227 (280)
T ss_pred cCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhcccCCCCccc---------CCHH
Confidence 4689999999999999999999999999999999999999975432211111110000000011111 1246
Q ss_pred HHHHHHHccCCCCCCCC-----CHHHHHHHHh
Q 002278 859 TFQLALLCTKRYPSERP-----TMQEVARVLV 885 (943)
Q Consensus 859 l~~l~~~cl~~dP~~RP-----t~~el~~~L~ 885 (943)
+.+++..|++.||++|| +++++++|-+
T Consensus 228 ~~~li~~~l~~~P~~R~~~~~~~~~~~l~h~~ 259 (280)
T cd05608 228 SKSFCEALLAKDPEKRLGFRDGNCDGLRTHPL 259 (280)
T ss_pred HHHHHHHHhcCCHHHhcCCCCCCHHHHhcChh
Confidence 77899999999999999 7888888743
No 109
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-37 Score=336.01 Aligned_cols=247 Identities=25% Similarity=0.402 Sum_probs=205.0
Q ss_pred ceEEeeeceEEEEEEEecC-CceEEEEEecccCcccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEEccCCCh
Q 002278 621 KYIVGYGASSTVYKCALKN-SRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSL 699 (943)
Q Consensus 621 ~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 699 (943)
.-++|+|.||+||.|++.+ ...+|||.+.....+..+.+..|+..-++++|.|||+++|.+.+++..-|.||-++||+|
T Consensus 580 rvVLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSL 659 (1226)
T KOG4279|consen 580 RVVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSL 659 (1226)
T ss_pred eEEeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcH
Confidence 3479999999999999875 467899999888777788899999999999999999999999999999999999999999
Q ss_pred hhhccCCCCCccC--CHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEEC-CCCceeecccccccccCCCCCcee
Q 002278 700 WDLLHGPSKKVKL--DWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILID-ENFDAHLSDFGIARCIPTAMPHAS 776 (943)
Q Consensus 700 ~~~l~~~~~~~~l--~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~-~~~~~kl~DFGla~~~~~~~~~~~ 776 (943)
.++++. .-+++ .+.++-.+..||++||.|||+. .|||||||-.|||++ -.|.+||+|||-++++..-.+...
T Consensus 660 SsLLrs--kWGPlKDNEstm~fYtkQILeGLkYLHen---~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~TE 734 (1226)
T KOG4279|consen 660 SSLLRS--KWGPLKDNESTMNFYTKQILEGLKYLHEN---KIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPCTE 734 (1226)
T ss_pred HHHHHh--ccCCCccchhHHHHHHHHHHHHhhhhhhc---ceeeccccCCcEEEeeccceEEecccccchhhccCCcccc
Confidence 999973 34455 7888999999999999999999 999999999999996 678999999999999876655443
Q ss_pred eeEecccceeCccccccC--CCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccccCccCHH
Q 002278 777 TFVLGTIGYIDPEYAHTS--RLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLS 854 (943)
Q Consensus 777 ~~~~gt~~y~aPE~~~~~--~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 854 (943)
...||.-|||||++..+ .|+.++|||||||++.||.||++||..-...... ....+..+ +.|.++. +
T Consensus 735 -TFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAA-MFkVGmyK----vHP~iPe-----e 803 (1226)
T KOG4279|consen 735 -TFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAA-MFKVGMYK----VHPPIPE-----E 803 (1226)
T ss_pred -ccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHh-hhhhccee----cCCCCcH-----H
Confidence 45599999999999865 5899999999999999999999999755443221 11222222 2333331 2
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002278 855 AVRKTFQLALLCTKRYPSERPTMQEVARV 883 (943)
Q Consensus 855 ~~~~l~~l~~~cl~~dP~~RPt~~el~~~ 883 (943)
...+...++.+|..+||.+||+++++++.
T Consensus 804 lsaeak~FilrcFepd~~~R~sA~~LL~D 832 (1226)
T KOG4279|consen 804 LSAEAKNFILRCFEPDPCDRPSAKDLLQD 832 (1226)
T ss_pred HHHHHHHHHHHHcCCCcccCccHHHhccC
Confidence 23455679999999999999999999874
No 110
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.5e-38 Score=333.22 Aligned_cols=252 Identities=29% Similarity=0.374 Sum_probs=214.1
Q ss_pred hhccccceEEeeeceEEEEEEEec-CCceEEEEEeccc---CcccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEE
Q 002278 615 TENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQ---YPHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLF 690 (943)
Q Consensus 615 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 690 (943)
...|...+.||.|+||.||-|++. +.+.||||++.-. +.+...++.+|++++++++|||+|.+.|+|..+...|+|
T Consensus 25 Eklf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLV 104 (948)
T KOG0577|consen 25 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLV 104 (948)
T ss_pred HHHHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHH
Confidence 456777788999999999999975 5678999998533 234566889999999999999999999999999999999
Q ss_pred EEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCC
Q 002278 691 YDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPT 770 (943)
Q Consensus 691 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~ 770 (943)
|||| -|+-.|++.. .+.++.+..+..|..+.+.||+|||+. +.||||||+.|||+++.|.||++|||.|..+..
T Consensus 105 MEYC-lGSAsDlleV--hkKplqEvEIAAi~~gaL~gLaYLHS~---~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~P 178 (948)
T KOG0577|consen 105 MEYC-LGSASDLLEV--HKKPLQEVEIAAITHGALQGLAYLHSH---NRIHRDIKAGNILLSEPGLVKLADFGSASIMAP 178 (948)
T ss_pred HHHH-hccHHHHHHH--HhccchHHHHHHHHHHHHHHHHHHHHh---hHHhhhccccceEecCCCeeeeccccchhhcCc
Confidence 9999 5677787753 345788999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCceeeeEecccceeCcccccc---CCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccc
Q 002278 771 AMPHASTFVLGTIGYIDPEYAHT---SRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVS 847 (943)
Q Consensus 771 ~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 847 (943)
.. .++|||.|||||++.. +.|+-++||||+|++..|+.-.++|+.+.+.+..+..+...+.+....
T Consensus 179 An-----sFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHIAQNesPtLqs------ 247 (948)
T KOG0577|consen 179 AN-----SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTLQS------ 247 (948)
T ss_pred hh-----cccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHHHHHhcCCCCCCC------
Confidence 42 3569999999998763 679999999999999999999999999988888888877766544431
Q ss_pred cCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcC
Q 002278 848 VTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLVSLL 888 (943)
Q Consensus 848 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~~~ 888 (943)
.+....+..++..|+++-|.+|||..++++|-.-..
T Consensus 248 -----~eWS~~F~~Fvd~CLqKipqeRptse~ll~H~fv~R 283 (948)
T KOG0577|consen 248 -----NEWSDYFRNFVDSCLQKIPQERPTSEELLKHRFVLR 283 (948)
T ss_pred -----chhHHHHHHHHHHHHhhCcccCCcHHHHhhcchhcc
Confidence 123356778999999999999999999998865433
No 111
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.1e-36 Score=314.10 Aligned_cols=254 Identities=24% Similarity=0.269 Sum_probs=213.3
Q ss_pred hccccceEEeeeceEEEEEEEecC-CceEEEEEecccCc---ccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEE
Q 002278 616 ENLSEKYIVGYGASSTVYKCALKN-SRPIAVKKLYNQYP---HNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFY 691 (943)
Q Consensus 616 ~~~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 691 (943)
+.|+..+.||+|.-|+||+|+.++ +..+|+|++.+..- ....+.+.|.++|+.++||.++.+|+.|+.+...+++|
T Consensus 77 ~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~m 156 (459)
T KOG0610|consen 77 RHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVM 156 (459)
T ss_pred HHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEE
Confidence 456777889999999999999886 47889999976542 33456778999999999999999999999999999999
Q ss_pred EEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCC
Q 002278 692 DYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTA 771 (943)
Q Consensus 692 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~ 771 (943)
|||+||+|..+.+.+ ....+++..+.-+|..++.||+|||-. |||+|||||+||||.++|++-|+||.++......
T Consensus 157 eyCpGGdL~~LrqkQ-p~~~fse~~aRFYaAEvl~ALEYLHml---GivYRDLKPENILvredGHIMLsDFDLS~~~~~~ 232 (459)
T KOG0610|consen 157 EYCPGGDLHSLRQKQ-PGKRFSESAARFYAAEVLLALEYLHML---GIVYRDLKPENILVREDGHIMLSDFDLSLRCPVS 232 (459)
T ss_pred ecCCCccHHHHHhhC-CCCccchhhHHHHHHHHHHHHHHHHhh---ceeeccCCcceeEEecCCcEEeeeccccccCCCC
Confidence 999999999988754 456799999999999999999999999 9999999999999999999999999998543110
Q ss_pred ---------------------------------CC----------------------ceeeeEecccceeCccccccCCC
Q 002278 772 ---------------------------------MP----------------------HASTFVLGTIGYIDPEYAHTSRL 796 (943)
Q Consensus 772 ---------------------------------~~----------------------~~~~~~~gt~~y~aPE~~~~~~~ 796 (943)
.. ......+||-+|.|||++.|..+
T Consensus 233 Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GH 312 (459)
T KOG0610|consen 233 PTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGH 312 (459)
T ss_pred CeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCC
Confidence 00 00112469999999999999999
Q ss_pred CCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccccCccCHHHHHHHHHHHHHccCCCCCCCCC
Q 002278 797 NEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPT 876 (943)
Q Consensus 797 ~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt 876 (943)
+.++|+|+|||++|||+.|+.||.+.+.-+.+..+..+...+++.. . ......++|++.+.+||.+|-.
T Consensus 313 gsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~Fp~~~--~---------vs~~akDLIr~LLvKdP~kRlg 381 (459)
T KOG0610|consen 313 GSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLKFPEEP--E---------VSSAAKDLIRKLLVKDPSKRLG 381 (459)
T ss_pred CchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCcCCCCC--c---------chhHHHHHHHHHhccChhhhhc
Confidence 9999999999999999999999999888888777766555544432 1 2245678999999999999997
Q ss_pred ----HHHHHHHH
Q 002278 877 ----MQEVARVL 884 (943)
Q Consensus 877 ----~~el~~~L 884 (943)
|.||-+|-
T Consensus 382 ~~rGA~eIK~Hp 393 (459)
T KOG0610|consen 382 SKRGAAEIKRHP 393 (459)
T ss_pred cccchHHhhcCc
Confidence 88888764
No 112
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=100.00 E-value=1e-39 Score=348.45 Aligned_cols=374 Identities=26% Similarity=0.414 Sum_probs=254.4
Q ss_pred CCCCCCCEEEeeCCccc-ccCCCCccCCCCCcEEeccCCCcCCccchhccccccceEEEecCcccccCCCcccCCCCCCc
Q 002278 59 GDLRNLQSIDFQGNKLT-GQIPDEIGNCGSLVHIELSDNSLYGDIPFSISKLKQLEFLNLKNNQLTGPIPSTLTQIPNLK 137 (943)
Q Consensus 59 ~~l~~L~~L~Ls~n~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~ 137 (943)
+-|+..+-.|+++|.++ +..|.....+++++.|.|...++. .+|..++.|.+|++|.+++|++. .+.+.++.||.|+
T Consensus 4 gVLpFVrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~-~vhGELs~Lp~LR 81 (1255)
T KOG0444|consen 4 GVLPFVRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLI-SVHGELSDLPRLR 81 (1255)
T ss_pred cccceeecccccCCcCCCCcCchhHHHhhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhH-hhhhhhccchhhH
Confidence 34566777788888887 467777888888888888888887 78888888888888888888887 5667777777777
Q ss_pred EEEEeccccccccchhccccccceeccccCCccCCCCCcccccccccceeeccceecccccCCCCcCCCcccEEEeeccc
Q 002278 138 TLDLARNQLTGEIPRLIYWNEVLQYLGLRGNALTGMLSPDMCQLTGLWYFDVRGNNLTGTIPDSIGNCTSFEILDISYNQ 217 (943)
Q Consensus 138 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~l~~l~~L~~L~Ls~N~ 217 (943)
.+++..|++... -+|..+..+..|++||||+|+
T Consensus 82 sv~~R~N~LKns-----------------------------------------------GiP~diF~l~dLt~lDLShNq 114 (1255)
T KOG0444|consen 82 SVIVRDNNLKNS-----------------------------------------------GIPTDIFRLKDLTILDLSHNQ 114 (1255)
T ss_pred HHhhhccccccC-----------------------------------------------CCCchhcccccceeeecchhh
Confidence 777777776511 123333444445555555555
Q ss_pred ccCcCCCCCCcceEeEEEecCccccccCCccccccCCCcEEecCCCCCCCCCCcccCCCCCcceEEecCCCCCCCCCCCc
Q 002278 218 ITGEIPYNIGFLQVATLSLQGNKLTGKIPEVIGLMQALAVLDLSENELVGPIPPILGNLSYTGKLYLHGNKLTGPIPPEL 297 (943)
Q Consensus 218 l~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 297 (943)
++ ..|..+..-+++-+|+||+|+|..+....|-+|+.|-.|+|++|++. .+|+..
T Consensus 115 L~------------------------EvP~~LE~AKn~iVLNLS~N~IetIPn~lfinLtDLLfLDLS~NrLe-~LPPQ~ 169 (1255)
T KOG0444|consen 115 LR------------------------EVPTNLEYAKNSIVLNLSYNNIETIPNSLFINLTDLLFLDLSNNRLE-MLPPQI 169 (1255)
T ss_pred hh------------------------hcchhhhhhcCcEEEEcccCccccCCchHHHhhHhHhhhccccchhh-hcCHHH
Confidence 44 22333333344444444444444333334444444444555555544 344455
Q ss_pred CCCCcCcEEEcccCccccccccccCCcccceEEEccccccC-CcCcccccCCCcCcEEEeeCCcccCcccccccccCccc
Q 002278 298 GNMSKLSYLQLQNNQLVGTIPAELGKLEQLFELNLADNNLE-GPIPHNISSCTALNQFNVHGNRLSGAIPSSFRNLGSLT 376 (943)
Q Consensus 298 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 376 (943)
..+.+|+.|+|++|.+...--..+..+++|++|.+++.+=+ .-+|..+..+.+|..++++.|.+. +.|+.+.++.+|+
T Consensus 170 RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp-~vPecly~l~~Lr 248 (1255)
T KOG0444|consen 170 RRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLP-IVPECLYKLRNLR 248 (1255)
T ss_pred HHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCCC-cchHHHhhhhhhh
Confidence 55566666666666554333334445556666666655432 245666777777777777777776 6777778888888
Q ss_pred eeeccCCcCCCCCCCCCCCCCCccEEecCCCcCCCccCCCcccccccceeecccccccc-cCCccccCCCccceecccCc
Q 002278 377 YLNLSRNNFKGKVPTELGRIINLDTLDLSVNNFSGSVPASIGDLEHLLTLNLSRNHLNG-LLPAEFGNLRSIQTIDMSFN 455 (943)
Q Consensus 377 ~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N 455 (943)
.|+||+|+|+ .+.-..+...+|+.|+||.|+++ .+|..+.+|+.|+.|++.+|+++- -+|..++.|.+|+.+..++|
T Consensus 249 rLNLS~N~it-eL~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~n~NkL~FeGiPSGIGKL~~Levf~aanN 326 (1255)
T KOG0444|consen 249 RLNLSGNKIT-ELNMTEGEWENLETLNLSRNQLT-VLPDAVCKLTKLTKLYANNNKLTFEGIPSGIGKLIQLEVFHAANN 326 (1255)
T ss_pred eeccCcCcee-eeeccHHHHhhhhhhccccchhc-cchHHHhhhHHHHHHHhccCcccccCCccchhhhhhhHHHHhhcc
Confidence 8888888887 55556677778888888888887 678888888888888888888762 36778888888888888888
Q ss_pred cccccCChhhhcccccceecccCcccCCCCCCcCccccCCcccccCCccccccCCC
Q 002278 456 QLSGSIPAELGQLQNIISLILNNNNLQGGIPDQLSNCFSLSNLNVSYNNLSGIIPP 511 (943)
Q Consensus 456 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~ 511 (943)
.|. .+|..++++..|+.|.|++|+|- .+|+.+.-++.|+.|||..|+=--.||.
T Consensus 327 ~LE-lVPEglcRC~kL~kL~L~~NrLi-TLPeaIHlL~~l~vLDlreNpnLVMPPK 380 (1255)
T KOG0444|consen 327 KLE-LVPEGLCRCVKLQKLKLDHNRLI-TLPEAIHLLPDLKVLDLRENPNLVMPPK 380 (1255)
T ss_pred ccc-cCchhhhhhHHHHHhccccccee-echhhhhhcCCcceeeccCCcCccCCCC
Confidence 887 78888888888888888888887 6788888888888888888875555553
No 113
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=2.7e-36 Score=339.54 Aligned_cols=262 Identities=23% Similarity=0.324 Sum_probs=206.5
Q ss_pred HhhccccceEEeeeceEEEEEEEecC------CceEEEEEecccCc-ccHHHHHHHHHHHhcCC-CCCcceeeeEEecCC
Q 002278 614 STENLSEKYIVGYGASSTVYKCALKN------SRPIAVKKLYNQYP-HNLREFETELETIGSIR-HRNIVSLHGYALSPY 685 (943)
Q Consensus 614 ~~~~~~~~~~lG~G~~g~Vy~~~~~~------~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~ 685 (943)
..++|.+.+.||+|+||.||+|.+.. +..||||++..... ...+.+.+|+++++++. |||||++++++.+.+
T Consensus 35 ~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~ 114 (400)
T cd05105 35 PRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSG 114 (400)
T ss_pred cccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCC
Confidence 35688899999999999999998632 24699999865432 33467889999999996 999999999999999
Q ss_pred cceEEEEEccCCChhhhccCCC----------------------------------------------------------
Q 002278 686 GNLLFYDYMVNGSLWDLLHGPS---------------------------------------------------------- 707 (943)
Q Consensus 686 ~~~lv~e~~~~g~L~~~l~~~~---------------------------------------------------------- 707 (943)
..++||||+++|+|.++++...
T Consensus 115 ~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (400)
T cd05105 115 PIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEI 194 (400)
T ss_pred ceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhh
Confidence 9999999999999998875321
Q ss_pred -----------------------------------CCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEEC
Q 002278 708 -----------------------------------KKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILID 752 (943)
Q Consensus 708 -----------------------------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~ 752 (943)
....+++.++..++.|++.||+|||+. +|+||||||+||+++
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dikp~Nill~ 271 (400)
T cd05105 195 KEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASK---NCVHRDLAARNVLLA 271 (400)
T ss_pred hhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHhEEEe
Confidence 012478888999999999999999998 999999999999999
Q ss_pred CCCceeecccccccccCCCCCc-eeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCccHHHHHH
Q 002278 753 ENFDAHLSDFGIARCIPTAMPH-ASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIM 830 (943)
Q Consensus 753 ~~~~~kl~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~ 830 (943)
+++.+||+|||+++........ ......++..|+|||.+.+..++.++|||||||++|||++ |..||...........
T Consensus 272 ~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~~~~ 351 (400)
T cd05105 272 QGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTFYN 351 (400)
T ss_pred CCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHHHHH
Confidence 9999999999999865432221 1222346788999999999899999999999999999997 9999976433222222
Q ss_pred HhccccccccccCcccccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcCC
Q 002278 831 SKADDNTVMEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLVSLLP 889 (943)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~~~~ 889 (943)
....... +.... .....+.+++..||+.||++||++.++.+.|+.+.+
T Consensus 352 ~~~~~~~------~~~~~-----~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~~ 399 (400)
T cd05105 352 KIKSGYR------MAKPD-----HATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLLP 399 (400)
T ss_pred HHhcCCC------CCCCc-----cCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHcC
Confidence 2211111 11110 123567899999999999999999999999987654
No 114
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=1.2e-36 Score=335.65 Aligned_cols=247 Identities=18% Similarity=0.255 Sum_probs=199.0
Q ss_pred ccccceEEeeeceEEEEEEEec-CCceEEEEEecccC---cccHHHHHHHHHHHhcC-CCCCcceeeeEEecCCcceEEE
Q 002278 617 NLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQY---PHNLREFETELETIGSI-RHRNIVSLHGYALSPYGNLLFY 691 (943)
Q Consensus 617 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 691 (943)
+|+..+.||+|+||.||+|..+ +++.||+|.+.+.. ....+.+..|.+++..+ +|++|+.+++++.+.+..++||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 4778899999999999999976 46789999986542 22334566788888777 5899999999999999999999
Q ss_pred EEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCC
Q 002278 692 DYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTA 771 (943)
Q Consensus 692 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~ 771 (943)
||+++|+|.+++. ....+++.++..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++.....
T Consensus 81 E~~~~g~L~~~~~---~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~ 154 (323)
T cd05616 81 EYVNGGDLMYQIQ---QVGRFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWD 154 (323)
T ss_pred cCCCCCCHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHHC---CEEecCCCHHHeEECCCCcEEEccCCCceecCCC
Confidence 9999999999886 345689999999999999999999999 9999999999999999999999999999754322
Q ss_pred CCceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccccCcc
Q 002278 772 MPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCV 851 (943)
Q Consensus 772 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 851 (943)
.. ......||+.|+|||++.+..++.++|||||||++|||+||+.||...........+.......+. .+
T Consensus 155 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~~~~~~~p~----~~----- 224 (323)
T cd05616 155 GV-TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPK----SM----- 224 (323)
T ss_pred CC-ccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCC----cC-----
Confidence 21 223346899999999999999999999999999999999999999876654433333322211111 11
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCH-----HHHHHH
Q 002278 852 DLSAVRKTFQLALLCTKRYPSERPTM-----QEVARV 883 (943)
Q Consensus 852 ~~~~~~~l~~l~~~cl~~dP~~RPt~-----~el~~~ 883 (943)
...+.+++.+|++.||++|++. .++.+|
T Consensus 225 ----s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h 257 (323)
T cd05616 225 ----SKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 257 (323)
T ss_pred ----CHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcC
Confidence 2456789999999999999974 666655
No 115
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=4e-36 Score=325.64 Aligned_cols=256 Identities=28% Similarity=0.452 Sum_probs=205.1
Q ss_pred hccccceEEeeeceEEEEEEEecCC------ceEEEEEecccC-cccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcce
Q 002278 616 ENLSEKYIVGYGASSTVYKCALKNS------RPIAVKKLYNQY-PHNLREFETELETIGSIRHRNIVSLHGYALSPYGNL 688 (943)
Q Consensus 616 ~~~~~~~~lG~G~~g~Vy~~~~~~~------~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 688 (943)
++|+..+.||+|+||.||+|..... ..||+|.+.... ......+.+|+++++.++||||+++++++......+
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTC 84 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceE
Confidence 4678889999999999999986532 578999886443 233456889999999999999999999999988999
Q ss_pred EEEEEccCCChhhhccCCCC-------------CccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCC
Q 002278 689 LFYDYMVNGSLWDLLHGPSK-------------KVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENF 755 (943)
Q Consensus 689 lv~e~~~~g~L~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~ 755 (943)
++|||+++|+|.+++..... ...+++.++..++.|++.||+|||+. +++||||||+||++++++
T Consensus 85 ~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nil~~~~~ 161 (283)
T cd05048 85 MLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSH---HFVHRDLAARNCLVGEGL 161 (283)
T ss_pred EEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccccceEEEcCCC
Confidence 99999999999999864221 14588999999999999999999999 999999999999999999
Q ss_pred ceeecccccccccCCCCC-ceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCccHHHHHHHhc
Q 002278 756 DAHLSDFGIARCIPTAMP-HASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKA 833 (943)
Q Consensus 756 ~~kl~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~ 833 (943)
.++|+|||+++....... .......+++.|+|||.+.+..++.++|||||||++|||++ |..||.+...... .....
T Consensus 162 ~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~-~~~i~ 240 (283)
T cd05048 162 TVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEV-IEMIR 240 (283)
T ss_pred cEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHH-HHHHH
Confidence 999999999986533221 11223346789999999998899999999999999999998 9999986544322 22211
Q ss_pred cccccccccCcccccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhh
Q 002278 834 DDNTVMEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLVS 886 (943)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~ 886 (943)
.. .. +..+. .....+.+++.+||+.||++||+++++.++|+.
T Consensus 241 ~~-~~-----~~~~~-----~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05048 241 SR-QL-----LPCPE-----DCPARVYALMIECWNEIPARRPRFKDIHTRLRS 282 (283)
T ss_pred cC-Cc-----CCCcc-----cCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence 11 11 11111 123578899999999999999999999999875
No 116
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=5.3e-36 Score=320.51 Aligned_cols=256 Identities=27% Similarity=0.383 Sum_probs=207.2
Q ss_pred hhccccceEEeeeceEEEEEEEecCCceEEEEEecccCcccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEEc
Q 002278 615 TENLSEKYIVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYM 694 (943)
Q Consensus 615 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 694 (943)
.++|+..+.||+|+||+||+|.+.++..||+|++.... ...+.+.+|++++++++||||+++++++.+ ...++||||+
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~lv~e~~ 82 (262)
T cd05071 5 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYM 82 (262)
T ss_pred hHHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCc-cCHHHHHHHHHHHHhCCCCCcceEEEEECC-CCcEEEEEcC
Confidence 45789999999999999999998877789999986532 345678999999999999999999998754 5689999999
Q ss_pred cCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCCc
Q 002278 695 VNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPH 774 (943)
Q Consensus 695 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~~ 774 (943)
++|+|.+++... ....+++..+..++.|++.||+|||+. +++||||||+||++++++.++|+|||.++........
T Consensus 83 ~~~~L~~~~~~~-~~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~ 158 (262)
T cd05071 83 SKGSLLDFLKGE-MGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT 158 (262)
T ss_pred CCCcHHHHHhhc-cccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcccEEEcCCCcEEeccCCceeeccccccc
Confidence 999999999642 234578999999999999999999999 9999999999999999999999999999876543322
Q ss_pred eeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCccHHHHHHHhccccccccccCcccccCccCH
Q 002278 775 ASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDL 853 (943)
Q Consensus 775 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 853 (943)
......++..|+|||+..+..++.++|||||||++|||+| |+.||.+............ .... ... .
T Consensus 159 ~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~~~-~~~~--~~~---------~ 226 (262)
T cd05071 159 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER-GYRM--PCP---------P 226 (262)
T ss_pred cccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHhc-CCCC--CCc---------c
Confidence 2223346778999999998899999999999999999999 8889976554333222211 1110 001 1
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcC
Q 002278 854 SAVRKTFQLALLCTKRYPSERPTMQEVARVLVSLL 888 (943)
Q Consensus 854 ~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~~~ 888 (943)
.....+.+++.+|++.+|++||++.++.+.|+...
T Consensus 227 ~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~~ 261 (262)
T cd05071 227 ECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 261 (262)
T ss_pred ccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHhc
Confidence 22356789999999999999999999999998654
No 117
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=4e-36 Score=320.40 Aligned_cols=251 Identities=25% Similarity=0.355 Sum_probs=203.4
Q ss_pred hccccceEEeeeceEEEEEEEecCCceEEEEEecccCcccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEEcc
Q 002278 616 ENLSEKYIVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMV 695 (943)
Q Consensus 616 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 695 (943)
.+|+..+.||+|+||.||+|.++.+..+|+|.+... ......+.+|+++++.++||||+++++++...+..++||||++
T Consensus 4 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~ 82 (256)
T cd05059 4 SELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREG-AMSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMA 82 (256)
T ss_pred HHcchhhhhccCCCceEEEeEecCCccEEEEEeccC-CCCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCC
Confidence 457788899999999999999887778999987643 2344678889999999999999999999999999999999999
Q ss_pred CCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCCce
Q 002278 696 NGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHA 775 (943)
Q Consensus 696 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~~~ 775 (943)
+++|.+++... ...+++..+..++.|++.|++|||+. +++||||||+||++++++.+||+|||+++.........
T Consensus 83 ~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~~ 157 (256)
T cd05059 83 NGCLLNYLRER--KGKLGTEWLLDMCSDVCEAMEYLESN---GFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTS 157 (256)
T ss_pred CCCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHhhEEECCCCcEEECCcccceecccccccc
Confidence 99999998632 33689999999999999999999999 99999999999999999999999999998664322211
Q ss_pred eeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCccHHHHHHHhccccccccccCcccccCccCHH
Q 002278 776 STFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLS 854 (943)
Q Consensus 776 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 854 (943)
.....++..|+|||...+..++.++||||||+++|||++ |+.||............... . ....+. .
T Consensus 158 ~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~-~------~~~~~~-----~ 225 (256)
T cd05059 158 SQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAG-Y------RLYRPK-----L 225 (256)
T ss_pred cCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHcC-C------cCCCCC-----C
Confidence 111123457999999999899999999999999999999 89999765544333222111 1 111110 1
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 002278 855 AVRKTFQLALLCTKRYPSERPTMQEVARVL 884 (943)
Q Consensus 855 ~~~~l~~l~~~cl~~dP~~RPt~~el~~~L 884 (943)
....+.+++.+||+.+|++|||+.++++.|
T Consensus 226 ~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 226 APTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred CCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 234678999999999999999999999876
No 118
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=7.1e-36 Score=319.82 Aligned_cols=255 Identities=25% Similarity=0.376 Sum_probs=206.6
Q ss_pred hccccceEEeeeceEEEEEEEec-CCceEEEEEecccCcccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEEc
Q 002278 616 ENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYM 694 (943)
Q Consensus 616 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 694 (943)
.+|...+.||+|+||.||+|.++ .++.||+|.+... .....++.+|+++++.++||||+++++++..++..+++|||+
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 84 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCC-chHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeC
Confidence 45778889999999999999976 4788999987643 334567889999999999999999999999999999999999
Q ss_pred cCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCCc
Q 002278 695 VNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPH 774 (943)
Q Consensus 695 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~~ 774 (943)
++++|.+++... ....+++.++..++.|++.||+|||+. +++||||||+||++++++.+||+|||++.........
T Consensus 85 ~~~~L~~~~~~~-~~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~ 160 (263)
T cd05052 85 TYGNLLDYLREC-NRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 160 (263)
T ss_pred CCCcHHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCcEEeCCCccccccccceee
Confidence 999999998643 234589999999999999999999999 9999999999999999999999999999876543222
Q ss_pred eeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCccHHHHHHHhccccccccccCcccccCccCH
Q 002278 775 ASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDL 853 (943)
Q Consensus 775 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 853 (943)
......++..|+|||.+.+..++.++|||||||++|||++ |..||.+..... ......... .+..+.
T Consensus 161 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~-~~~~~~~~~------~~~~~~----- 228 (263)
T cd05052 161 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-VYELLEKGY------RMERPE----- 228 (263)
T ss_pred ccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH-HHHHHHCCC------CCCCCC-----
Confidence 2222234668999999999999999999999999999998 999997654332 222221111 111111
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhc
Q 002278 854 SAVRKTFQLALLCTKRYPSERPTMQEVARVLVSL 887 (943)
Q Consensus 854 ~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~~ 887 (943)
.....+.+++.+||..+|++||++.++++.|+.+
T Consensus 229 ~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 229 GCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred CCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence 1125677899999999999999999999998764
No 119
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-37 Score=329.45 Aligned_cols=257 Identities=25% Similarity=0.365 Sum_probs=211.0
Q ss_pred hhccccceEEeeeceEEEEEEEecC---C--ceEEEEEecc-cCcccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcce
Q 002278 615 TENLSEKYIVGYGASSTVYKCALKN---S--RPIAVKKLYN-QYPHNLREFETELETIGSIRHRNIVSLHGYALSPYGNL 688 (943)
Q Consensus 615 ~~~~~~~~~lG~G~~g~Vy~~~~~~---~--~~vavK~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 688 (943)
.+..+..++||.|.||.||+|...+ | -.||||..+. ..++..+.|..|+.+|+.++|||||+++|+|.+. ..+
T Consensus 388 Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e~-P~W 466 (974)
T KOG4257|consen 388 RELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQ-PMW 466 (974)
T ss_pred hhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeecc-cee
Confidence 3444556789999999999998543 3 3588998876 3466688899999999999999999999999874 689
Q ss_pred EEEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeeccccccccc
Q 002278 689 LFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCI 768 (943)
Q Consensus 689 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~ 768 (943)
||||.++.|.|..+++. ++..++..+...++.||+.||+|||+. ++|||||.++|||+.+.-.||++|||+++.+
T Consensus 467 ivmEL~~~GELr~yLq~--nk~sL~l~tL~ly~~Qi~talaYLeSk---rfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ 541 (974)
T KOG4257|consen 467 IVMELAPLGELREYLQQ--NKDSLPLRTLTLYCYQICTALAYLESK---RFVHRDIAARNILVSSPQCVKLADFGLSRYL 541 (974)
T ss_pred EEEecccchhHHHHHHh--ccccchHHHHHHHHHHHHHHHHHHHhh---chhhhhhhhhheeecCcceeeecccchhhhc
Confidence 99999999999999985 445688899999999999999999999 9999999999999999999999999999999
Q ss_pred CCCCCceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCccHHHHHHHhccccccccccCcccc
Q 002278 769 PTAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKADDNTVMEAVDPEVS 847 (943)
Q Consensus 769 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 847 (943)
+++.....+...=+..|||||.+...+++.++|||.|||.+||++. |..||.+..+-+.+..+..++. ...+
T Consensus 542 ed~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~iEnGeR-------lP~P 614 (974)
T KOG4257|consen 542 EDDAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGHIENGER-------LPCP 614 (974)
T ss_pred cccchhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceEEEecCCCC-------CCCC
Confidence 8776655554445678999999999999999999999999999988 9999987554332222211111 1111
Q ss_pred cCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcCC
Q 002278 848 VTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLVSLLP 889 (943)
Q Consensus 848 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~~~~ 889 (943)
. .++..++.++.+||+.||.+||++.++...|..+..
T Consensus 615 ~-----nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~q 651 (974)
T KOG4257|consen 615 P-----NCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQ 651 (974)
T ss_pred C-----CCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHH
Confidence 1 233577899999999999999999999988865543
No 120
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=4.3e-36 Score=332.28 Aligned_cols=259 Identities=23% Similarity=0.337 Sum_probs=203.1
Q ss_pred hhccccceEEeeeceEEEEEEEec-CCceEEEEEecccC-cccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEE
Q 002278 615 TENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQY-PHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYD 692 (943)
Q Consensus 615 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 692 (943)
.++|+..+.||+|+||.||+|.++ ++..+|+|.+.... ......+.+|+++++.++||||+++++++.+++..++|||
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEe
Confidence 367899999999999999999987 56778888776432 2334678899999999999999999999999999999999
Q ss_pred EccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCC
Q 002278 693 YMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAM 772 (943)
Q Consensus 693 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~ 772 (943)
|+++|+|.+++. ....+++..+..++.|++.|++|||+.. +|+||||||+||+++.++.+||+|||++.......
T Consensus 84 ~~~~~~L~~~l~---~~~~~~~~~~~~~~~~l~~~l~~lH~~~--~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~ 158 (333)
T cd06650 84 HMDGGSLDQVLK---KAGRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM 158 (333)
T ss_pred cCCCCcHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChhhEEEcCCCCEEEeeCCcchhhhhhc
Confidence 999999999986 3346889999999999999999999741 79999999999999999999999999997653321
Q ss_pred CceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHh-cccccccc-----------
Q 002278 773 PHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSK-ADDNTVME----------- 840 (943)
Q Consensus 773 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~-~~~~~~~~----------- 840 (943)
.....|+..|+|||++.+..++.++|||||||++|||++|+.||............. ........
T Consensus 159 ---~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (333)
T cd06650 159 ---ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRPPG 235 (333)
T ss_pred ---cccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccCCcc
Confidence 122458999999999999899999999999999999999999997543221111000 00000000
Q ss_pred -------------------------ccCcccccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 002278 841 -------------------------AVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLV 885 (943)
Q Consensus 841 -------------------------~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~ 885 (943)
...+.+... .....+.+++.+||+.||++|||+.|+++|-+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~li~~~L~~~P~~Rpt~~ell~h~~ 301 (333)
T cd06650 236 RPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSG----VFGAEFQDFVNKCLIKNPAERADLKQLMVHAF 301 (333)
T ss_pred chhhhhcccccccccHHHHHHHHhcCCCccCCCC----CcCHHHHHHHHHhccCCcccCcCHHHHhhCHH
Confidence 000000000 11245778999999999999999999998755
No 121
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=1.8e-36 Score=334.30 Aligned_cols=242 Identities=22% Similarity=0.263 Sum_probs=193.1
Q ss_pred eEEeeeceEEEEEEEec-CCceEEEEEecccC---cccHHHHHHHHH-HHhcCCCCCcceeeeEEecCCcceEEEEEccC
Q 002278 622 YIVGYGASSTVYKCALK-NSRPIAVKKLYNQY---PHNLREFETELE-TIGSIRHRNIVSLHGYALSPYGNLLFYDYMVN 696 (943)
Q Consensus 622 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 696 (943)
+.||+|+||+||+|..+ +++.||+|++.... ......+..|.. +++.++||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 36999999999999976 57899999986432 122334455554 46789999999999999999999999999999
Q ss_pred CChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCCcee
Q 002278 697 GSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHAS 776 (943)
Q Consensus 697 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~~~~ 776 (943)
|+|.+++. ....+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++...... ...
T Consensus 81 g~L~~~l~---~~~~~~~~~~~~~~~qi~~~l~~lH~~---givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~-~~~ 153 (323)
T cd05575 81 GELFFHLQ---RERSFPEPRARFYAAEIASALGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHS-KTT 153 (323)
T ss_pred CCHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeccCCCcccccCC-Ccc
Confidence 99999886 345689999999999999999999999 99999999999999999999999999987542221 222
Q ss_pred eeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccccCccCHHHH
Q 002278 777 TFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAV 856 (943)
Q Consensus 777 ~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 856 (943)
....||+.|+|||++.+..++.++|||||||++|||++|+.||................. ...+.+ .
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~----~~~~~~---------~ 220 (323)
T cd05575 154 STFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNKPL----RLKPNI---------S 220 (323)
T ss_pred ccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCC----CCCCCC---------C
Confidence 345699999999999999999999999999999999999999987654333222222111 112222 2
Q ss_pred HHHHHHHHHccCCCCCCCCCH----HHHHHH
Q 002278 857 RKTFQLALLCTKRYPSERPTM----QEVARV 883 (943)
Q Consensus 857 ~~l~~l~~~cl~~dP~~RPt~----~el~~~ 883 (943)
..+.+++.+|++.||++||++ .+++++
T Consensus 221 ~~~~~li~~~l~~~p~~R~~~~~~~~~il~~ 251 (323)
T cd05575 221 VSARHLLEGLLQKDRTKRLGAKDDFLEIKNH 251 (323)
T ss_pred HHHHHHHHHHhhcCHHhCCCCCCCHHHHHcC
Confidence 456789999999999999987 466654
No 122
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=6.7e-36 Score=328.93 Aligned_cols=258 Identities=22% Similarity=0.359 Sum_probs=204.7
Q ss_pred hccccceEEeeeceEEEEEEEecC-Cc----eEEEEEecccC-cccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceE
Q 002278 616 ENLSEKYIVGYGASSTVYKCALKN-SR----PIAVKKLYNQY-PHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLL 689 (943)
Q Consensus 616 ~~~~~~~~lG~G~~g~Vy~~~~~~-~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 689 (943)
.+|+..+.||+|+||.||+|.+.. +. .||+|++.... ....+++.+|+.+++.++||||+++++++..+ ..++
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~ 85 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL 85 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Ccee
Confidence 468899999999999999998653 33 48999986443 34456788999999999999999999999764 5789
Q ss_pred EEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccC
Q 002278 690 FYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIP 769 (943)
Q Consensus 690 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~ 769 (943)
++||+++|+|.+++.. ....+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++.+.
T Consensus 86 v~e~~~~g~l~~~l~~--~~~~~~~~~~~~~~~qi~~~L~~LH~~---~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~ 160 (316)
T cd05108 86 ITQLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQIAKGMNYLEER---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 160 (316)
T ss_pred eeecCCCCCHHHHHHh--ccccCCHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEecCCCcEEEcccccccccc
Confidence 9999999999999874 234588999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCce-eeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCccHHHHHHHhccccccccccCcccc
Q 002278 770 TAMPHA-STFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKADDNTVMEAVDPEVS 847 (943)
Q Consensus 770 ~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 847 (943)
...... .....++..|+|||++.+..++.++|||||||++|||++ |+.||.+.... .............. .+.
T Consensus 161 ~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~-~~~~~~~~~~~~~~--~~~-- 235 (316)
T cd05108 161 ADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS-EISSILEKGERLPQ--PPI-- 235 (316)
T ss_pred CCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHH-HHHHHHhCCCCCCC--CCC--
Confidence 432211 111224678999999999999999999999999999998 99999765432 22222221111110 111
Q ss_pred cCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcCCCC
Q 002278 848 VTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLVSLLPAP 891 (943)
Q Consensus 848 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~~~~~~ 891 (943)
....+.+++..||..+|++||++.+++..+..+...+
T Consensus 236 -------~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~~ 272 (316)
T cd05108 236 -------CTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 272 (316)
T ss_pred -------CCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHcCC
Confidence 1135678999999999999999999999998776544
No 123
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=4.3e-36 Score=322.40 Aligned_cols=258 Identities=21% Similarity=0.324 Sum_probs=207.2
Q ss_pred hccccceEEeeeceEEEEEEEec-CCceEEEEEecccC---cccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEE
Q 002278 616 ENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQY---PHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFY 691 (943)
Q Consensus 616 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 691 (943)
++|+..+.||+|+||.||+|+.+ +++.||+|++.... ......+.+|+++++.++||||+++++++.+.+..++++
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 57888999999999999999975 67899999875422 233456889999999999999999999999999999999
Q ss_pred EEccCCChhhhccCCC-CCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCC
Q 002278 692 DYMVNGSLWDLLHGPS-KKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPT 770 (943)
Q Consensus 692 e~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~ 770 (943)
||+++|+|.+++.... ....+++..+..++.|++.||+|||++ +++||||||+||+++.++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~ 158 (267)
T cd08228 82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCCHHHEEEcCCCCEEECccccceeccc
Confidence 9999999998875322 234578999999999999999999999 999999999999999999999999999987643
Q ss_pred CCCceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCcc-HHHHHHHhccccccccccCcccccC
Q 002278 771 AMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESN-LHQLIMSKADDNTVMEAVDPEVSVT 849 (943)
Q Consensus 771 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 849 (943)
.... .....|++.|+|||.+.+..++.++|+||+|+++|||++|+.||..... ...+........ .+...
T Consensus 159 ~~~~-~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~------~~~~~-- 229 (267)
T cd08228 159 KTTA-AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCD------YPPLP-- 229 (267)
T ss_pred hhHH-HhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHHhcCC------CCCCC--
Confidence 3221 1223588899999999988899999999999999999999999965432 222222221111 11111
Q ss_pred ccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhc
Q 002278 850 CVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLVSL 887 (943)
Q Consensus 850 ~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~~ 887 (943)
.......+.+++.+||+.+|++||++.++++.++.+
T Consensus 230 --~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~ 265 (267)
T cd08228 230 --TEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQM 265 (267)
T ss_pred --hhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHh
Confidence 111235678999999999999999999999998764
No 124
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=4.7e-36 Score=324.53 Aligned_cols=256 Identities=26% Similarity=0.413 Sum_probs=205.7
Q ss_pred hhccccceEEeeeceEEEEEEEecC------CceEEEEEecccCcc-cHHHHHHHHHHHhcCCCCCcceeeeEEecCCcc
Q 002278 615 TENLSEKYIVGYGASSTVYKCALKN------SRPIAVKKLYNQYPH-NLREFETELETIGSIRHRNIVSLHGYALSPYGN 687 (943)
Q Consensus 615 ~~~~~~~~~lG~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 687 (943)
.++|...+.||+|+||.||+|...+ ++.||+|.+...... ..+.+.+|+++++.++||||+++++++......
T Consensus 4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 83 (280)
T cd05049 4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPP 83 (280)
T ss_pred hHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCe
Confidence 3567888899999999999998643 478999998765443 456889999999999999999999999999999
Q ss_pred eEEEEEccCCChhhhccCCC-----------CCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCc
Q 002278 688 LLFYDYMVNGSLWDLLHGPS-----------KKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFD 756 (943)
Q Consensus 688 ~lv~e~~~~g~L~~~l~~~~-----------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~ 756 (943)
++||||+++|+|.+++.... ....+++.++..++.|++.|++|||+. +++||||||+||+++.++.
T Consensus 84 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~~ 160 (280)
T cd05049 84 IMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQ---HFVHRDLATRNCLVGYDLV 160 (280)
T ss_pred EEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeeccccccceEEEcCCCe
Confidence 99999999999999986421 234578999999999999999999999 9999999999999999999
Q ss_pred eeecccccccccCCCCC-ceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCccHHHHHHHhcc
Q 002278 757 AHLSDFGIARCIPTAMP-HASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKAD 834 (943)
Q Consensus 757 ~kl~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~ 834 (943)
+||+|||+++....... .......+++.|+|||++.+..++.++|||||||++|||++ |+.||..............
T Consensus 161 ~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~~~~~- 239 (280)
T cd05049 161 VKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIECITQ- 239 (280)
T ss_pred EEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHc-
Confidence 99999999976532221 11122335788999999999999999999999999999999 9999976544332222211
Q ss_pred ccccccccCcccccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 002278 835 DNTVMEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLV 885 (943)
Q Consensus 835 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~ 885 (943)
+.... ... .....+.+++.+||..||++||++.|+++.|.
T Consensus 240 -~~~~~-~~~---------~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~ 279 (280)
T cd05049 240 -GRLLQ-RPR---------TCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ 279 (280)
T ss_pred -CCcCC-CCC---------CCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence 11100 011 11246779999999999999999999999875
No 125
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-39 Score=365.33 Aligned_cols=445 Identities=30% Similarity=0.362 Sum_probs=310.9
Q ss_pred EEEEEcCCCCCccccCCCcCCCCCCCEEEeeCCcccccCCCCccCCCCCcEEeccCCCcCCccchhccccccceEEEecC
Q 002278 40 VVSLNLSSLNLGGEISPSIGDLRNLQSIDFQGNKLTGQIPDEIGNCGSLVHIELSDNSLYGDIPFSISKLKQLEFLNLKN 119 (943)
Q Consensus 40 v~~L~l~~~~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 119 (943)
++.|+++.|-+...--+...+.-.|+.|||+.|++. ..|..+..+.+|+.|+++.|-|. ..|.+.+.+++|++|.|.+
T Consensus 23 ~~~ln~~~N~~l~~pl~~~~~~v~L~~l~lsnn~~~-~fp~~it~l~~L~~ln~s~n~i~-~vp~s~~~~~~l~~lnL~~ 100 (1081)
T KOG0618|consen 23 LQILNLRRNSLLSRPLEFVEKRVKLKSLDLSNNQIS-SFPIQITLLSHLRQLNLSRNYIR-SVPSSCSNMRNLQYLNLKN 100 (1081)
T ss_pred HHhhhccccccccCchHHhhheeeeEEeeccccccc-cCCchhhhHHHHhhcccchhhHh-hCchhhhhhhcchhheecc
Confidence 555666666554211122333444777777777666 56666677777777777777776 5666666777777777777
Q ss_pred cccccCCCcccCCCCCCcEEEEeccccccccchhccccccceeccccCC-------------------ccCCCCCccccc
Q 002278 120 NQLTGPIPSTLTQIPNLKTLDLARNQLTGEIPRLIYWNEVLQYLGLRGN-------------------ALTGMLSPDMCQ 180 (943)
Q Consensus 120 n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n-------------------~l~~~~~~~~~~ 180 (943)
|++. ..|..+..+.+|+.||+|.|++. .+|..+..+..++.+.+++| .+.+-...++..
T Consensus 101 n~l~-~lP~~~~~lknl~~LdlS~N~f~-~~Pl~i~~lt~~~~~~~s~N~~~~~lg~~~ik~~~l~~n~l~~~~~~~i~~ 178 (1081)
T KOG0618|consen 101 NRLQ-SLPASISELKNLQYLDLSFNHFG-PIPLVIEVLTAEEELAASNNEKIQRLGQTSIKKLDLRLNVLGGSFLIDIYN 178 (1081)
T ss_pred chhh-cCchhHHhhhcccccccchhccC-CCchhHHhhhHHHHHhhhcchhhhhhccccchhhhhhhhhcccchhcchhh
Confidence 7766 66777777777777777777766 56666666666666666666 333333333333
Q ss_pred ccccceeeccceecccccCCCCcCCCcccEEEeecccccCcCCCCCCcceEeEEEecCccccccCCccccccCCCcEEec
Q 002278 181 LTGLWYFDVRGNNLTGTIPDSIGNCTSFEILDISYNQITGEIPYNIGFLQVATLSLQGNKLTGKIPEVIGLMQALAVLDL 260 (943)
Q Consensus 181 l~~L~~L~L~~N~i~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L 260 (943)
+.. .|+|+.|.+. . -.+.++.+|+.|.+..|++.. ......+++.|+.++|.+....+ -....+|+++|+
T Consensus 179 l~~--~ldLr~N~~~-~--~dls~~~~l~~l~c~rn~ls~---l~~~g~~l~~L~a~~n~l~~~~~--~p~p~nl~~~di 248 (1081)
T KOG0618|consen 179 LTH--QLDLRYNEME-V--LDLSNLANLEVLHCERNQLSE---LEISGPSLTALYADHNPLTTLDV--HPVPLNLQYLDI 248 (1081)
T ss_pred hhe--eeecccchhh-h--hhhhhccchhhhhhhhcccce---EEecCcchheeeeccCcceeecc--ccccccceeeec
Confidence 332 3555555544 1 134445555555555555431 11233467788888888874332 234567888999
Q ss_pred CCCCCCCCCCcccCCCCCcceEEecCCCCCCCCCCCcCCCCcCcEEEcccCccccccccccCCcccceEEEccccccCCc
Q 002278 261 SENELVGPIPPILGNLSYTGKLYLHGNKLTGPIPPELGNMSKLSYLQLQNNQLVGTIPAELGKLEQLFELNLADNNLEGP 340 (943)
Q Consensus 261 s~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 340 (943)
++|+++. +|++++.+.+|+.|...+|.++ .+|..+..+++|+.|++.+|.+. -+|....+++.|++|+|..|+|...
T Consensus 249 s~n~l~~-lp~wi~~~~nle~l~~n~N~l~-~lp~ri~~~~~L~~l~~~~nel~-yip~~le~~~sL~tLdL~~N~L~~l 325 (1081)
T KOG0618|consen 249 SHNNLSN-LPEWIGACANLEALNANHNRLV-ALPLRISRITSLVSLSAAYNELE-YIPPFLEGLKSLRTLDLQSNNLPSL 325 (1081)
T ss_pred chhhhhc-chHHHHhcccceEecccchhHH-hhHHHHhhhhhHHHHHhhhhhhh-hCCCcccccceeeeeeehhcccccc
Confidence 9998884 5688888889999999999886 67788888888999999999888 5666777888899999999988855
Q ss_pred CcccccCCCc-CcEEEeeCCcccCcccccccccCccceeeccCCcCCCCCCCCCCCCCCccEEecCCCcCCCccCCCccc
Q 002278 341 IPHNISSCTA-LNQFNVHGNRLSGAIPSSFRNLGSLTYLNLSRNNFKGKVPTELGRIINLDTLDLSVNNFSGSVPASIGD 419 (943)
Q Consensus 341 ~p~~~~~l~~-L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 419 (943)
++..+..+.. |+.|+.+.|++.......=..+..|+.|++.+|.++...-..+.+...|+.|+|++|++.......+.+
T Consensus 326 p~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~~fpas~~~k 405 (1081)
T KOG0618|consen 326 PDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLNSFPASKLRK 405 (1081)
T ss_pred chHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCcccccchhhhccccceeeeeecccccccCCHHHHhc
Confidence 4444454444 788888888887444222234567889999999998777777888889999999999998544455788
Q ss_pred ccccceeecccccccccCCccccCCCccceecccCccccccCChhhhcccccceecccCcccCCCCCCcCccccCCcccc
Q 002278 420 LEHLLTLNLSRNHLNGLLPAEFGNLRSIQTIDMSFNQLSGSIPAELGQLQNIISLILNNNNLQGGIPDQLSNCFSLSNLN 499 (943)
Q Consensus 420 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 499 (943)
++.|+.|+||+|+|+ .+|..+.+++.|++|...+|+|. ..| ++.+++.|+.+|++.|+|+...-......++|++||
T Consensus 406 le~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~-~fP-e~~~l~qL~~lDlS~N~L~~~~l~~~~p~p~LkyLd 482 (1081)
T KOG0618|consen 406 LEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLL-SFP-ELAQLPQLKVLDLSCNNLSEVTLPEALPSPNLKYLD 482 (1081)
T ss_pred hHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCcee-ech-hhhhcCcceEEecccchhhhhhhhhhCCCcccceee
Confidence 999999999999998 57788999999999999999998 677 889999999999999998853322233337899999
Q ss_pred cCCcc
Q 002278 500 VSYNN 504 (943)
Q Consensus 500 ls~N~ 504 (943)
|++|.
T Consensus 483 lSGN~ 487 (1081)
T KOG0618|consen 483 LSGNT 487 (1081)
T ss_pred ccCCc
Confidence 99997
No 126
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=9.8e-36 Score=319.38 Aligned_cols=256 Identities=26% Similarity=0.397 Sum_probs=206.3
Q ss_pred hhccccceEEeeeceEEEEEEEecC----CceEEEEEecccC-cccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceE
Q 002278 615 TENLSEKYIVGYGASSTVYKCALKN----SRPIAVKKLYNQY-PHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLL 689 (943)
Q Consensus 615 ~~~~~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 689 (943)
.++|+..+.||+|+||+||+|.++. ...||+|.+.... ......+.+|+.+++.++||||+++++++...+..++
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~i 82 (266)
T cd05033 3 PSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMI 82 (266)
T ss_pred hHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEE
Confidence 4578889999999999999998753 3578999886543 2334578899999999999999999999999999999
Q ss_pred EEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccC
Q 002278 690 FYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIP 769 (943)
Q Consensus 690 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~ 769 (943)
+|||+++++|.+++... ...+++.++..++.|++.|++|||+. +|+||||||+||++++++.++++|||+++...
T Consensus 83 v~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~di~p~nili~~~~~~~l~dfg~~~~~~ 157 (266)
T cd05033 83 ITEYMENGSLDKFLREN--DGKFTVGQLVGMLRGIASGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFGLSRRLE 157 (266)
T ss_pred EEEcCCCCCHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCCEEECccchhhccc
Confidence 99999999999998642 34689999999999999999999998 99999999999999999999999999998875
Q ss_pred CCCCc-eeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCccHHHHHHHhccccccccccCcccc
Q 002278 770 TAMPH-ASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKADDNTVMEAVDPEVS 847 (943)
Q Consensus 770 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 847 (943)
..... ......++..|+|||.+.+..++.++||||||+++|||++ |..||............ ....... ..
T Consensus 158 ~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~-~~~~~~~------~~ 230 (266)
T cd05033 158 DSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAV-EDGYRLP------PP 230 (266)
T ss_pred ccccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHHHHHHH-HcCCCCC------CC
Confidence 22221 1112234678999999999899999999999999999998 99999765433322222 1111110 00
Q ss_pred cCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhc
Q 002278 848 VTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLVSL 887 (943)
Q Consensus 848 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~~ 887 (943)
. .....+.+++.+|++.+|++||++.+++++|..+
T Consensus 231 ~-----~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 231 M-----DCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred C-----CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 0 1124677999999999999999999999999764
No 127
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=6.5e-36 Score=325.12 Aligned_cols=262 Identities=26% Similarity=0.408 Sum_probs=209.8
Q ss_pred hhccccceEEeeeceEEEEEEEec------CCceEEEEEecccCcccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcce
Q 002278 615 TENLSEKYIVGYGASSTVYKCALK------NSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYALSPYGNL 688 (943)
Q Consensus 615 ~~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 688 (943)
..+|...+.||+|+||.||+|... ++..+|+|.+........+.+.+|++++++++||||+++++++...+..+
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 83 (291)
T cd05094 4 RRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLI 83 (291)
T ss_pred hHHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceE
Confidence 346778889999999999999853 24568888887665555677899999999999999999999999999999
Q ss_pred EEEEEccCCChhhhccCCC-------------CCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCC
Q 002278 689 LFYDYMVNGSLWDLLHGPS-------------KKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENF 755 (943)
Q Consensus 689 lv~e~~~~g~L~~~l~~~~-------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~ 755 (943)
+||||+++++|.+++.... ....+++..++.++.|++.|++|||++ +|+||||||+||+++.++
T Consensus 84 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~Nil~~~~~ 160 (291)
T cd05094 84 MVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ---HFVHRDLATRNCLVGANL 160 (291)
T ss_pred EEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEccCC
Confidence 9999999999999986321 123589999999999999999999999 999999999999999999
Q ss_pred ceeecccccccccCCCCC-ceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCccHHHHHHHhc
Q 002278 756 DAHLSDFGIARCIPTAMP-HASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKA 833 (943)
Q Consensus 756 ~~kl~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~ 833 (943)
.++|+|||+++....... .......++..|+|||++.+..++.++|||||||++|||+| |+.||........+.....
T Consensus 161 ~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~ 240 (291)
T cd05094 161 LVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQ 240 (291)
T ss_pred cEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhC
Confidence 999999999976543221 11122346788999999999999999999999999999999 9999976554332221111
Q ss_pred cccccccccCcccccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcCCCC
Q 002278 834 DDNTVMEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLVSLLPAP 891 (943)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~~~~~~ 891 (943)
..... ... ..+..+.+++.+||+.+|++||++.++++.|..+....
T Consensus 241 --~~~~~-----~~~-----~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~~ 286 (291)
T cd05094 241 --GRVLE-----RPR-----VCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKAT 286 (291)
T ss_pred --CCCCC-----CCc-----cCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhhc
Confidence 11111 110 11246779999999999999999999999999876543
No 128
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=2.8e-36 Score=337.97 Aligned_cols=254 Identities=22% Similarity=0.277 Sum_probs=201.2
Q ss_pred hccccceEEeeeceEEEEEEEec-CCceEEEEEecccC---cccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEE
Q 002278 616 ENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQY---PHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFY 691 (943)
Q Consensus 616 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 691 (943)
++|+..+.||+|+||+||+|..+ .++.||+|++.... ......+.+|++++..++||+|+++++++.+.+..++||
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~ 80 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM 80 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 36788899999999999999976 57889999986432 234456788999999999999999999999999999999
Q ss_pred EEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCC
Q 002278 692 DYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTA 771 (943)
Q Consensus 692 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~ 771 (943)
||+++|+|.+++. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 81 E~~~gg~L~~~l~---~~~~l~~~~~~~~~~qi~~~L~~lH~~---givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~ 154 (360)
T cd05627 81 EFLPGGDMMTLLM---KKDTLSEEATQFYIAETVLAIDAIHQL---GFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKA 154 (360)
T ss_pred eCCCCccHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEeeccCCcccccc
Confidence 9999999999986 345689999999999999999999999 9999999999999999999999999998754321
Q ss_pred CC----------------------------------ceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCC
Q 002278 772 MP----------------------------------HASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKK 817 (943)
Q Consensus 772 ~~----------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~ 817 (943)
.. ......+||+.|+|||++.+..++.++|||||||++|||+||+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~ 234 (360)
T cd05627 155 HRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYP 234 (360)
T ss_pred cccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCC
Confidence 10 00113469999999999999999999999999999999999999
Q ss_pred CCCCCccHHHHHHHhccccccccccCcccccCccCHHHHHHHHHHHHHccCCCCCCCC---CHHHHHHHHh
Q 002278 818 AVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERP---TMQEVARVLV 885 (943)
Q Consensus 818 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP---t~~el~~~L~ 885 (943)
||.+................. ..++... ......+++.+++. ||.+|+ ++.++.+|-+
T Consensus 235 Pf~~~~~~~~~~~i~~~~~~~--~~p~~~~-------~s~~~~~li~~l~~-~p~~R~~~~~~~ei~~hp~ 295 (360)
T cd05627 235 PFCSETPQETYRKVMNWKETL--VFPPEVP-------ISEKAKDLILRFCT-DSENRIGSNGVEEIKSHPF 295 (360)
T ss_pred CCCCCCHHHHHHHHHcCCCce--ecCCCCC-------CCHHHHHHHHHhcc-ChhhcCCCCCHHHHhcCCC
Confidence 998776655443333211111 1111111 11345566776664 999998 4788888753
No 129
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-39 Score=365.25 Aligned_cols=445 Identities=27% Similarity=0.344 Sum_probs=372.4
Q ss_pred cEEEEEcCCCCCccccCCCcCCCCCCCEEEeeCCcccccCCCCccCCCCCcEEeccCCCcCCccchhccccccceEEEec
Q 002278 39 SVVSLNLSSLNLGGEISPSIGDLRNLQSIDFQGNKLTGQIPDEIGNCGSLVHIELSDNSLYGDIPFSISKLKQLEFLNLK 118 (943)
Q Consensus 39 ~v~~L~l~~~~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 118 (943)
++.+||++.|.++ .+|..+..+.+|+.|+++.|-|. ..|.+.+++.+|++|+|..|++. .+|.++..+++|+.|++|
T Consensus 46 ~L~~l~lsnn~~~-~fp~~it~l~~L~~ln~s~n~i~-~vp~s~~~~~~l~~lnL~~n~l~-~lP~~~~~lknl~~LdlS 122 (1081)
T KOG0618|consen 46 KLKSLDLSNNQIS-SFPIQITLLSHLRQLNLSRNYIR-SVPSSCSNMRNLQYLNLKNNRLQ-SLPASISELKNLQYLDLS 122 (1081)
T ss_pred eeEEeeccccccc-cCCchhhhHHHHhhcccchhhHh-hCchhhhhhhcchhheeccchhh-cCchhHHhhhcccccccc
Confidence 4789999999988 89999999999999999999998 88899999999999999999999 899999999999999999
Q ss_pred CcccccCCCcccCCCCCCcEEEEecc-------------------ccccccchhccccccceeccccCCccCCCCCcccc
Q 002278 119 NNQLTGPIPSTLTQIPNLKTLDLARN-------------------QLTGEIPRLIYWNEVLQYLGLRGNALTGMLSPDMC 179 (943)
Q Consensus 119 ~n~l~~~~~~~~~~l~~L~~L~Ls~N-------------------~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 179 (943)
.|++. .+|..+..++.+.+++.++| .+.+.++..+..+.. .|+|+.|.+. + .++.
T Consensus 123 ~N~f~-~~Pl~i~~lt~~~~~~~s~N~~~~~lg~~~ik~~~l~~n~l~~~~~~~i~~l~~--~ldLr~N~~~-~--~dls 196 (1081)
T KOG0618|consen 123 FNHFG-PIPLVIEVLTAEEELAASNNEKIQRLGQTSIKKLDLRLNVLGGSFLIDIYNLTH--QLDLRYNEME-V--LDLS 196 (1081)
T ss_pred hhccC-CCchhHHhhhHHHHHhhhcchhhhhhccccchhhhhhhhhcccchhcchhhhhe--eeecccchhh-h--hhhh
Confidence 99998 67777777766666666666 333344444444433 5999999998 2 4678
Q ss_pred cccccceeeccceecccccCCCCcCCCcccEEEeecccccCcCCCCCCcceEeEEEecCccccccCCccccccCCCcEEe
Q 002278 180 QLTGLWYFDVRGNNLTGTIPDSIGNCTSFEILDISYNQITGEIPYNIGFLQVATLSLQGNKLTGKIPEVIGLMQALAVLD 259 (943)
Q Consensus 180 ~l~~L~~L~L~~N~i~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~ 259 (943)
.+.+|+.+++..|++... .-..++|+.|+.++|.++ .....+...+++++++++|++++ +|++++.+.+|+.|+
T Consensus 197 ~~~~l~~l~c~rn~ls~l----~~~g~~l~~L~a~~n~l~-~~~~~p~p~nl~~~dis~n~l~~-lp~wi~~~~nle~l~ 270 (1081)
T KOG0618|consen 197 NLANLEVLHCERNQLSEL----EISGPSLTALYADHNPLT-TLDVHPVPLNLQYLDISHNNLSN-LPEWIGACANLEALN 270 (1081)
T ss_pred hccchhhhhhhhcccceE----EecCcchheeeeccCcce-eeccccccccceeeecchhhhhc-chHHHHhcccceEec
Confidence 889999999999999843 234588999999999998 44444556689999999999996 569999999999999
Q ss_pred cCCCCCCCCCCcccCCCCCcceEEecCCCCCCCCCCCcCCCCcCcEEEcccCccccccccccCCccc-ceEEEccccccC
Q 002278 260 LSENELVGPIPPILGNLSYTGKLYLHGNKLTGPIPPELGNMSKLSYLQLQNNQLVGTIPAELGKLEQ-LFELNLADNNLE 338 (943)
Q Consensus 260 Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~-L~~L~L~~N~l~ 338 (943)
..+|.++ .+|..+....+|+.|.+..|.+. -+|.....++.|++|+|..|+|....+..+.-+.. |..|+.+.|++.
T Consensus 271 ~n~N~l~-~lp~ri~~~~~L~~l~~~~nel~-yip~~le~~~sL~tLdL~~N~L~~lp~~~l~v~~~~l~~ln~s~n~l~ 348 (1081)
T KOG0618|consen 271 ANHNRLV-ALPLRISRITSLVSLSAAYNELE-YIPPFLEGLKSLRTLDLQSNNLPSLPDNFLAVLNASLNTLNVSSNKLS 348 (1081)
T ss_pred ccchhHH-hhHHHHhhhhhHHHHHhhhhhhh-hCCCcccccceeeeeeehhccccccchHHHhhhhHHHHHHhhhhcccc
Confidence 9999996 78888888999999999999999 67888889999999999999998444444444444 888999999998
Q ss_pred CcCcccccCCCcCcEEEeeCCcccCcccccccccCccceeeccCCcCCCCCCCCCCCCCCccEEecCCCcCCCccCCCcc
Q 002278 339 GPIPHNISSCTALNQFNVHGNRLSGAIPSSFRNLGSLTYLNLSRNNFKGKVPTELGRIINLDTLDLSVNNFSGSVPASIG 418 (943)
Q Consensus 339 ~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 418 (943)
...--.=.....|+.|++.+|.++...-..+.+...|+.|+|++|++.......+.++..|++|+||+|+++ .+|..+.
T Consensus 349 ~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva 427 (1081)
T KOG0618|consen 349 TLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLT-TLPDTVA 427 (1081)
T ss_pred ccccccchhhHHHHHHHHhcCcccccchhhhccccceeeeeecccccccCCHHHHhchHHhHHHhcccchhh-hhhHHHH
Confidence 554333345678999999999999888888999999999999999999655667889999999999999999 7899999
Q ss_pred cccccceeecccccccccCCccccCCCccceecccCccccccCChhhhcccccceecccCcccCCCCCCcCccccCCccc
Q 002278 419 DLEHLLTLNLSRNHLNGLLPAEFGNLRSIQTIDMSFNQLSGSIPAELGQLQNIISLILNNNNLQGGIPDQLSNCFSLSNL 498 (943)
Q Consensus 419 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 498 (943)
.+..|++|...+|+|. ..| .+..++.|+.+|+|.|+|+...-..-..-++|++|||+||.-.-..-..|..+..+..+
T Consensus 428 ~~~~L~tL~ahsN~l~-~fP-e~~~l~qL~~lDlS~N~L~~~~l~~~~p~p~LkyLdlSGN~~l~~d~~~l~~l~~l~~~ 505 (1081)
T KOG0618|consen 428 NLGRLHTLRAHSNQLL-SFP-ELAQLPQLKVLDLSCNNLSEVTLPEALPSPNLKYLDLSGNTRLVFDHKTLKVLKSLSQM 505 (1081)
T ss_pred hhhhhHHHhhcCCcee-ech-hhhhcCcceEEecccchhhhhhhhhhCCCcccceeeccCCcccccchhhhHHhhhhhhe
Confidence 9999999999999998 567 89999999999999999985432222233899999999998543444556667777777
Q ss_pred ccCCc
Q 002278 499 NVSYN 503 (943)
Q Consensus 499 ~ls~N 503 (943)
++.-|
T Consensus 506 ~i~~~ 510 (1081)
T KOG0618|consen 506 DITLN 510 (1081)
T ss_pred ecccC
Confidence 77777
No 130
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=1.1e-35 Score=317.94 Aligned_cols=254 Identities=28% Similarity=0.381 Sum_probs=205.4
Q ss_pred hhccccceEEeeeceEEEEEEEecCCceEEEEEecccCcccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEEc
Q 002278 615 TENLSEKYIVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYM 694 (943)
Q Consensus 615 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 694 (943)
.++|+..+.||+|+||.||+|...++..+|+|.+..... ..+.+.+|+.++++++||+++++++++. ....+++|||+
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~ 82 (260)
T cd05070 5 RESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEYM 82 (260)
T ss_pred hHHhhhhheeccccCceEEEEEecCCceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEEec
Confidence 457888999999999999999988888899999865432 4567899999999999999999999885 45689999999
Q ss_pred cCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCCc
Q 002278 695 VNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPH 774 (943)
Q Consensus 695 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~~ 774 (943)
++++|.+++... ....+++.++..++.|++.|++|||+. +++||||||+||++++++.++|+|||++..+......
T Consensus 83 ~~~~L~~~~~~~-~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~ 158 (260)
T cd05070 83 SKGSLLDFLKDG-EGRALKLPNLVDMAAQVAAGMAYIERM---NYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYT 158 (260)
T ss_pred CCCcHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEEeCCceEEeCCceeeeeccCcccc
Confidence 999999998642 234589999999999999999999999 9999999999999999999999999999876443222
Q ss_pred eeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCccHHHHHHHhccccccccccCcccccCccCH
Q 002278 775 ASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDL 853 (943)
Q Consensus 775 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 853 (943)
......++..|+|||+..+..++.++||||||+++|||++ |+.||.+............ ... +....
T Consensus 159 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~-~~~------~~~~~----- 226 (260)
T cd05070 159 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVER-GYR------MPCPQ----- 226 (260)
T ss_pred cccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHc-CCC------CCCCC-----
Confidence 2222335678999999988889999999999999999999 8999976554332222211 111 11111
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhh
Q 002278 854 SAVRKTFQLALLCTKRYPSERPTMQEVARVLVS 886 (943)
Q Consensus 854 ~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~ 886 (943)
.....+.+++.+|++++|++|||+.++.+.|+.
T Consensus 227 ~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 227 DCPISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred cCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 122467899999999999999999999998874
No 131
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=2.7e-36 Score=333.55 Aligned_cols=246 Identities=20% Similarity=0.306 Sum_probs=194.7
Q ss_pred eEEeeeceEEEEEEEec-CCceEEEEEecccC---cccHHHHHHHHHHHhcC-CCCCcceeeeEEecCCcceEEEEEccC
Q 002278 622 YIVGYGASSTVYKCALK-NSRPIAVKKLYNQY---PHNLREFETELETIGSI-RHRNIVSLHGYALSPYGNLLFYDYMVN 696 (943)
Q Consensus 622 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 696 (943)
++||+|+||.||+|..+ +++.||+|.+.... ......+.+|..+++.+ +||||+++++++.+....++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 36999999999999976 57889999987532 23345678899999888 699999999999999999999999999
Q ss_pred CChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCCcee
Q 002278 697 GSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHAS 776 (943)
Q Consensus 697 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~~~~ 776 (943)
|+|.+++. ....+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++...... ...
T Consensus 81 g~L~~~~~---~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~-~~~ 153 (329)
T cd05588 81 GDLMFHMQ---RQRKLPEEHARFYSAEISLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPG-DTT 153 (329)
T ss_pred CCHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEECcCccccccccCC-Ccc
Confidence 99999886 345699999999999999999999999 99999999999999999999999999987532211 122
Q ss_pred eeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCc-------cHHHHHHHhccccccccccCcccccC
Q 002278 777 TFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNES-------NLHQLIMSKADDNTVMEAVDPEVSVT 849 (943)
Q Consensus 777 ~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~ 849 (943)
....||+.|+|||++.+..++.++||||+||++|||+||+.||+... ....+.......... .++..+
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~--~~p~~~--- 228 (329)
T cd05588 154 STFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQI--RIPRSL--- 228 (329)
T ss_pred ccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCC--CCCCCC---
Confidence 33569999999999999999999999999999999999999996311 111111111111100 011111
Q ss_pred ccCHHHHHHHHHHHHHccCCCCCCCCC------HHHHHHHHh
Q 002278 850 CVDLSAVRKTFQLALLCTKRYPSERPT------MQEVARVLV 885 (943)
Q Consensus 850 ~~~~~~~~~l~~l~~~cl~~dP~~RPt------~~el~~~L~ 885 (943)
...+.+++..|++.||++||+ +.++++|-+
T Consensus 229 ------~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~hp~ 264 (329)
T cd05588 229 ------SVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSHPF 264 (329)
T ss_pred ------CHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcCCC
Confidence 135678999999999999997 678887744
No 132
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-36 Score=313.53 Aligned_cols=267 Identities=26% Similarity=0.364 Sum_probs=214.5
Q ss_pred HhhccccceEEeeeceEEEEEEEecCCceEEEEEecccCcccHHHHHHHHHHHhc--CCCCCcceeeeEEecCC----cc
Q 002278 614 STENLSEKYIVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGS--IRHRNIVSLHGYALSPY----GN 687 (943)
Q Consensus 614 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~~----~~ 687 (943)
..++....+.||+|.||.||+|.++ |+.||||++... +.+...+|.++++. ++|+||..+++.-..+. +.
T Consensus 209 iarqI~L~e~IGkGRyGEVwrG~wr-Ge~VAVKiF~sr---dE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQL 284 (513)
T KOG2052|consen 209 IARQIVLQEIIGKGRFGEVWRGRWR-GEDVAVKIFSSR---DERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQL 284 (513)
T ss_pred hhheeEEEEEecCccccceeecccc-CCceEEEEeccc---chhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEE
Confidence 4667888899999999999999998 788999999654 44667778888775 59999999999876543 46
Q ss_pred eEEEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhC-----CCCCeEecCCCCccEEECCCCceeeccc
Q 002278 688 LLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHD-----CNPRIIHRDVKSSNILIDENFDAHLSDF 762 (943)
Q Consensus 688 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-----~~~~ivH~Dlkp~Nill~~~~~~kl~DF 762 (943)
++|.+|.+.|||+|+|. ...++....++++..+|.||+|||-. .+|.|+|||||+.|||+..++.+.|+|+
T Consensus 285 wLvTdYHe~GSL~DyL~----r~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADL 360 (513)
T KOG2052|consen 285 WLVTDYHEHGSLYDYLN----RNTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADL 360 (513)
T ss_pred EEeeecccCCcHHHHHh----hccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeec
Confidence 89999999999999995 46799999999999999999999953 5789999999999999999999999999
Q ss_pred ccccccCCCCC---ceeeeEecccceeCccccccCC----C--CCcchhhhHHHHHHHHHhC----------CCCCCCCc
Q 002278 763 GIARCIPTAMP---HASTFVLGTIGYIDPEYAHTSR----L--NEKSDVYSFGIVLLEILTG----------KKAVDNES 823 (943)
Q Consensus 763 Gla~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~----~--~~~~DvwSlGvil~elltG----------~~p~~~~~ 823 (943)
|+|........ ......+||.+|||||++...- + -..+||||||.|+||++-. +.||.+..
T Consensus 361 GLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~V 440 (513)
T KOG2052|consen 361 GLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVV 440 (513)
T ss_pred eeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCC
Confidence 99987754422 2334567999999999987532 1 1479999999999999742 46776332
Q ss_pred cHHHHHHHhccccccccccCcccccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcCC
Q 002278 824 NLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLVSLLP 889 (943)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~~~~ 889 (943)
+.+.-... ..+..-.+.++|.++..+...+....+.++|+.||..+|+.|-|+-.+.+.+.++..
T Consensus 441 p~DPs~ee-MrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~ 505 (513)
T KOG2052|consen 441 PSDPSFEE-MRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSN 505 (513)
T ss_pred CCCCCHHH-HhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhc
Confidence 11100000 111223456678888888888899999999999999999999999999999887664
No 133
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=6.5e-36 Score=324.60 Aligned_cols=261 Identities=26% Similarity=0.414 Sum_probs=209.2
Q ss_pred hhccccceEEeeeceEEEEEEEec------CCceEEEEEecccCcccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcce
Q 002278 615 TENLSEKYIVGYGASSTVYKCALK------NSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYALSPYGNL 688 (943)
Q Consensus 615 ~~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 688 (943)
..+|...+.||+|+||.||++... ++..+|+|.+..........+.+|++++++++||||+++++++...+..+
T Consensus 4 ~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 83 (288)
T cd05093 4 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLI 83 (288)
T ss_pred hHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccE
Confidence 467888999999999999999852 23568999887665555667899999999999999999999999999999
Q ss_pred EEEEEccCCChhhhccCCC----------CCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCcee
Q 002278 689 LFYDYMVNGSLWDLLHGPS----------KKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAH 758 (943)
Q Consensus 689 lv~e~~~~g~L~~~l~~~~----------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~k 758 (943)
+||||+++++|.+++.... ....+++.++..++.|++.||+|||++ +++||||||+||++++++.+|
T Consensus 84 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~---~i~H~dlkp~Nili~~~~~~k 160 (288)
T cd05093 84 MVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVK 160 (288)
T ss_pred EEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEccCCcEE
Confidence 9999999999999986321 223589999999999999999999999 999999999999999999999
Q ss_pred ecccccccccCCCCCc-eeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCccHHHHHHHhcccc
Q 002278 759 LSDFGIARCIPTAMPH-ASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKADDN 836 (943)
Q Consensus 759 l~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~ 836 (943)
|+|||+++........ ......++..|+|||++.+..++.++|||||||++|||+| |+.||................
T Consensus 161 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~~i~~~~- 239 (288)
T cd05093 161 IGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGR- 239 (288)
T ss_pred eccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC-
Confidence 9999999865332211 1112235778999999998899999999999999999998 999997665433222222211
Q ss_pred ccccccCcccccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcCCC
Q 002278 837 TVMEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLVSLLPA 890 (943)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~~~~~ 890 (943)
... ... .....+.+++.+||+.+|.+|||+.++.+.|+.+...
T Consensus 240 -~~~-----~~~-----~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~ 282 (288)
T cd05093 240 -VLQ-----RPR-----TCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKA 282 (288)
T ss_pred -cCC-----CCC-----CCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHh
Confidence 111 000 0124678999999999999999999999999876643
No 134
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=3.8e-36 Score=322.82 Aligned_cols=255 Identities=25% Similarity=0.339 Sum_probs=203.9
Q ss_pred hhccccceEEeeeceEEEEEEEec-CCceEEEEEecccCcccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEE
Q 002278 615 TENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDY 693 (943)
Q Consensus 615 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 693 (943)
.++|+..+.||+|+||.||+|+.. +++.||+|++..........+.+|+.++++++||||+++++++...+..++||||
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~ 87 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEY 87 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeC
Confidence 457889999999999999999975 5788999988655445556788999999999999999999999999999999999
Q ss_pred ccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCC
Q 002278 694 MVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMP 773 (943)
Q Consensus 694 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~ 773 (943)
+++++|.+++. ....+++.++..++.|++.|++|||+. +|+||||||+||++++++.++|+|||+++.......
T Consensus 88 ~~~~~L~~~~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~ 161 (267)
T cd06646 88 CGGGSLQDIYH---VTGPLSELQIAYVCRETLQGLAYLHSK---GKMHRDIKGANILLTDNGDVKLADFGVAAKITATIA 161 (267)
T ss_pred CCCCcHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEECcCccceeeccccc
Confidence 99999999886 345689999999999999999999998 999999999999999999999999999987643221
Q ss_pred ceeeeEecccceeCccccc---cCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccccCc
Q 002278 774 HASTFVLGTIGYIDPEYAH---TSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTC 850 (943)
Q Consensus 774 ~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 850 (943)
......|+..|+|||.+. ...++.++||||+||++|||++|+.||.................. .+....
T Consensus 162 -~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~~~~~-----~~~~~~-- 233 (267)
T cd06646 162 -KRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSNFQ-----PPKLKD-- 233 (267)
T ss_pred -ccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheeeecCCCC-----CCCCcc--
Confidence 122345889999999874 345788999999999999999999999754433221111111000 011110
Q ss_pred cCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 002278 851 VDLSAVRKTFQLALLCTKRYPSERPTMQEVARVL 884 (943)
Q Consensus 851 ~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L 884 (943)
.......+.+++.+||+.+|++||+++++++++
T Consensus 234 -~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 234 -KTKWSSTFHNFVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred -ccccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence 011235678999999999999999999999875
No 135
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=1.5e-36 Score=333.08 Aligned_cols=261 Identities=20% Similarity=0.231 Sum_probs=213.6
Q ss_pred ccccceEEeeeceEEEEEEEec-CCceEEEEEecccCcccHHHHHHHHHHHhcCC-C-----CCcceeeeEEecCCcceE
Q 002278 617 NLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQYPHNLREFETELETIGSIR-H-----RNIVSLHGYALSPYGNLL 689 (943)
Q Consensus 617 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h-----~niv~l~~~~~~~~~~~l 689 (943)
+|.+.++||+|+||.|.+|.+. .++.||||.+++. .....+-..|+.+|..++ | -|+|+++++|....+.||
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~-k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hlci 265 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNK-KRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCI 265 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccC-hHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceee
Confidence 8899999999999999999976 5899999999765 334455677999999986 4 389999999999999999
Q ss_pred EEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCC--Cceeecccccccc
Q 002278 690 FYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDEN--FDAHLSDFGIARC 767 (943)
Q Consensus 690 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~--~~~kl~DFGla~~ 767 (943)
|+|.+ .-+|+++++... ...++...+..++.||+.||.+||+. +|||+||||+|||+.+. ..+||+|||.|++
T Consensus 266 VfELL-~~NLYellK~n~-f~Glsl~~ir~~~~Qil~~L~~L~~l---~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~ 340 (586)
T KOG0667|consen 266 VFELL-STNLYELLKNNK-FRGLSLPLVRKFAQQILTALLFLHEL---GIIHCDLKPENILLKDPKRSRIKVIDFGSSCF 340 (586)
T ss_pred eehhh-hhhHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCChhheeeccCCcCceeEEecccccc
Confidence 99988 679999998653 45699999999999999999999999 99999999999999743 4699999999997
Q ss_pred cCCCCCceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhcccccccccc-----
Q 002278 768 IPTAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAV----- 842 (943)
Q Consensus 768 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~----- 842 (943)
...... ..+.+..|+|||++.|.+|+.+.||||||||++||++|.+.|.+.+..+++..+....+..+..+
T Consensus 341 ~~q~vy----tYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~~~ 416 (586)
T KOG0667|consen 341 ESQRVY----TYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKMLDTAK 416 (586)
T ss_pred cCCcce----eeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHHHHhcc
Confidence 654322 45689999999999999999999999999999999999999999998888877665433221100
Q ss_pred ------Cc-------------------------------c--cccCc------cCHHHHHHHHHHHHHccCCCCCCCCCH
Q 002278 843 ------DP-------------------------------E--VSVTC------VDLSAVRKTFQLALLCTKRYPSERPTM 877 (943)
Q Consensus 843 ------~~-------------------------------~--~~~~~------~~~~~~~~l~~l~~~cl~~dP~~RPt~ 877 (943)
+. . .+... ........+.+++++|+.+||.+|+|+
T Consensus 417 ~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~tp 496 (586)
T KOG0667|consen 417 KAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERITP 496 (586)
T ss_pred ccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhcCCH
Confidence 00 0 00000 001234567899999999999999999
Q ss_pred HHHHHHHhhc
Q 002278 878 QEVARVLVSL 887 (943)
Q Consensus 878 ~el~~~L~~~ 887 (943)
.++++|-+--
T Consensus 497 ~qal~Hpfl~ 506 (586)
T KOG0667|consen 497 AQALNHPFLT 506 (586)
T ss_pred HHHhcCcccc
Confidence 9999987643
No 136
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=2.5e-36 Score=333.52 Aligned_cols=245 Identities=21% Similarity=0.302 Sum_probs=192.8
Q ss_pred eEEeeeceEEEEEEEec-CCceEEEEEecccC---cccHHHHHHHHHHHhcC-CCCCcceeeeEEecCCcceEEEEEccC
Q 002278 622 YIVGYGASSTVYKCALK-NSRPIAVKKLYNQY---PHNLREFETELETIGSI-RHRNIVSLHGYALSPYGNLLFYDYMVN 696 (943)
Q Consensus 622 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 696 (943)
+.||+|+||.||+|+.+ +++.||+|.+.+.. ......+.+|+.++.++ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 36999999999999976 46889999987542 23345577888888776 799999999999999999999999999
Q ss_pred CChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCCcee
Q 002278 697 GSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHAS 776 (943)
Q Consensus 697 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~~~~ 776 (943)
|+|.+++. ....+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++....... ..
T Consensus 81 ~~L~~~~~---~~~~l~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~-~~ 153 (329)
T cd05618 81 GDLMFHMQ---RQRKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD-TT 153 (329)
T ss_pred CCHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCCEEEeeCCccccccCCCC-cc
Confidence 99998886 345689999999999999999999999 999999999999999999999999999975422211 22
Q ss_pred eeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCc-------cHHHHHHHhccccccccccCcccccC
Q 002278 777 TFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNES-------NLHQLIMSKADDNTVMEAVDPEVSVT 849 (943)
Q Consensus 777 ~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~ 849 (943)
....||+.|+|||++.+..++.++|||||||++|||++|+.||.... ....+........ ...++..
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~------~~~~p~~ 227 (329)
T cd05618 154 STFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEK------QIRIPRS 227 (329)
T ss_pred ccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcC------CCCCCCC
Confidence 33569999999999999999999999999999999999999995211 1111111111000 0011111
Q ss_pred ccCHHHHHHHHHHHHHccCCCCCCCCC------HHHHHHHH
Q 002278 850 CVDLSAVRKTFQLALLCTKRYPSERPT------MQEVARVL 884 (943)
Q Consensus 850 ~~~~~~~~~l~~l~~~cl~~dP~~RPt------~~el~~~L 884 (943)
....+.+++.+|++.||++||+ +.++++|-
T Consensus 228 -----~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~hp 263 (329)
T cd05618 228 -----LSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHP 263 (329)
T ss_pred -----CCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcCC
Confidence 1245678999999999999998 56887763
No 137
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=2.1e-36 Score=345.96 Aligned_cols=262 Identities=21% Similarity=0.271 Sum_probs=198.2
Q ss_pred HhhccccceEEeeeceEEEEEEEec-CCceEEEEEecccCcccHHHHHHHHHHHhcCCCCCcceeeeEEecC--------
Q 002278 614 STENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYALSP-------- 684 (943)
Q Consensus 614 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-------- 684 (943)
..++|+..+.||+|+||.||+|... .++.||||++.... ....+|+.+++.++|||||++++++...
T Consensus 64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~ 139 (440)
T PTZ00036 64 PNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKN 139 (440)
T ss_pred cCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCc
Confidence 3467999999999999999999975 57899999885432 3345799999999999999999987432
Q ss_pred CcceEEEEEccCCChhhhccC-CCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCC-ceeeccc
Q 002278 685 YGNLLFYDYMVNGSLWDLLHG-PSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENF-DAHLSDF 762 (943)
Q Consensus 685 ~~~~lv~e~~~~g~L~~~l~~-~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~-~~kl~DF 762 (943)
...++||||+++ ++.+++.. ......+++..+..++.|++.||+|||+. +|+||||||+||+++.++ .+||+||
T Consensus 140 ~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~---~IiHrDLKp~NILl~~~~~~vkL~DF 215 (440)
T PTZ00036 140 IFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSK---FICHRDLKPQNLLIDPNTHTLKLCDF 215 (440)
T ss_pred eEEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCcCHHHEEEcCCCCceeeecc
Confidence 135689999975 67666542 12345689999999999999999999999 999999999999999654 6999999
Q ss_pred ccccccCCCCCceeeeEecccceeCcccccc-CCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhcccccccc-
Q 002278 763 GIARCIPTAMPHASTFVLGTIGYIDPEYAHT-SRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVME- 840 (943)
Q Consensus 763 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~- 840 (943)
|+|+.+..... .....||+.|+|||++.+ ..++.++||||+||++|||++|++||.+..............+....
T Consensus 216 Gla~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~ 293 (440)
T PTZ00036 216 GSAKNLLAGQR--SVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTED 293 (440)
T ss_pred ccchhccCCCC--cccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHH
Confidence 99987643322 223468999999998876 46899999999999999999999999887666555444332211110
Q ss_pred ---ccC--------cccccCc----cCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 002278 841 ---AVD--------PEVSVTC----VDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLV 885 (943)
Q Consensus 841 ---~~~--------~~~~~~~----~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~ 885 (943)
... +.+.... ........+.+++.+||..||.+|||+.|+++|-+
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~ 353 (440)
T PTZ00036 294 QLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPF 353 (440)
T ss_pred HHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChh
Confidence 000 0000000 00011246779999999999999999999998765
No 138
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=1.3e-35 Score=317.26 Aligned_cols=255 Identities=28% Similarity=0.399 Sum_probs=206.9
Q ss_pred HhhccccceEEeeeceEEEEEEEecCCceEEEEEecccCcccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEE
Q 002278 614 STENLSEKYIVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDY 693 (943)
Q Consensus 614 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 693 (943)
..+.|+..++||+|+||.||+|..++++.||+|.+.... ...+.+.+|+.++++++||||+++++++. .+..+++|||
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~ 81 (260)
T cd05067 4 PRETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGS-MSPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIITEY 81 (260)
T ss_pred chHHceeeeeeccCccceEEeeecCCCceEEEEEecCCC-CcHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEEEc
Confidence 346788899999999999999998888999999986543 34578899999999999999999999874 4578999999
Q ss_pred ccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCC
Q 002278 694 MVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMP 773 (943)
Q Consensus 694 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~ 773 (943)
+++|+|.+++... ....+++.++..++.|++.||+|||+. +++||||||+||++++++.++++|||++........
T Consensus 82 ~~~~~L~~~~~~~-~~~~~~~~~~~~i~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~ 157 (260)
T cd05067 82 MENGSLVDFLKTP-EGIKLTINKLIDMAAQIAEGMAFIERK---NYIHRDLRAANILVSETLCCKIADFGLARLIEDNEY 157 (260)
T ss_pred CCCCCHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHHhEEEcCCCCEEEccCcceeecCCCCc
Confidence 9999999988643 234689999999999999999999998 999999999999999999999999999987653322
Q ss_pred ceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCccHHHHHHHhccccccccccCcccccCccC
Q 002278 774 HASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVD 852 (943)
Q Consensus 774 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 852 (943)
.......++..|+|||++.+..++.++||||||+++||+++ |+.||.+........... .... .....
T Consensus 158 ~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~-~~~~------~~~~~---- 226 (260)
T cd05067 158 TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLE-RGYR------MPRPD---- 226 (260)
T ss_pred ccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHHH-cCCC------CCCCC----
Confidence 22222345778999999998889999999999999999999 999998655433222211 1111 01111
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhh
Q 002278 853 LSAVRKTFQLALLCTKRYPSERPTMQEVARVLVS 886 (943)
Q Consensus 853 ~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~ 886 (943)
....++.+++.+|+..+|++||+++++...|+.
T Consensus 227 -~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 227 -NCPEELYELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred -CCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence 112467899999999999999999999998874
No 139
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=4.8e-36 Score=337.71 Aligned_cols=262 Identities=23% Similarity=0.301 Sum_probs=202.4
Q ss_pred ccccceEEeeeceEEEEEEEec-CCceEEEEEecccC--cccHHHHHHHHHHHhcCCCCCcceeeeEEecCC-----cce
Q 002278 617 NLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQY--PHNLREFETELETIGSIRHRNIVSLHGYALSPY-----GNL 688 (943)
Q Consensus 617 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~~~ 688 (943)
+|+..+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+++++.++||||+++++++.... ..+
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 4778899999999999999975 68899999986532 233467889999999999999999999998776 679
Q ss_pred EEEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeeccccccccc
Q 002278 689 LFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCI 768 (943)
Q Consensus 689 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~ 768 (943)
+||||+. ++|.+.+. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 81 lv~e~~~-~~l~~~~~---~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~ 153 (372)
T cd07853 81 VVTELMQ-SDLHKIIV---SPQPLSSDHVKVFLYQILRGLKYLHSA---GILHRDIKPGNLLVNSNCVLKICDFGLARVE 153 (372)
T ss_pred EEeeccc-cCHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHHEEECCCCCEEeccccceeec
Confidence 9999986 57877775 345689999999999999999999999 9999999999999999999999999999866
Q ss_pred CCCCCceeeeEecccceeCccccccC-CCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhcccccc-ccc-----
Q 002278 769 PTAMPHASTFVLGTIGYIDPEYAHTS-RLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTV-MEA----- 841 (943)
Q Consensus 769 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~-~~~----- 841 (943)
............+++.|+|||++.+. .++.++||||+||++|||++|+.||.+.........+....+.. .+.
T Consensus 154 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~ 233 (372)
T cd07853 154 EPDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSAC 233 (372)
T ss_pred ccCccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhh
Confidence 44333333334578999999998874 47899999999999999999999998766544433322111100 000
Q ss_pred -----------c-CcccccC-ccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 002278 842 -----------V-DPEVSVT-CVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLV 885 (943)
Q Consensus 842 -----------~-~~~~~~~-~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~ 885 (943)
. .+..... .........+.+++.+|++.||++|||+.|+++|-+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~ 290 (372)
T cd07853 234 EGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHPY 290 (372)
T ss_pred HHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCHh
Confidence 0 0000000 000011346778999999999999999999998865
No 140
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=7.9e-36 Score=322.13 Aligned_cols=257 Identities=23% Similarity=0.368 Sum_probs=203.2
Q ss_pred HhhccccceEEeeeceEEEEEEEec------CCceEEEEEecccC-cccHHHHHHHHHHHhcCCCCCcceeeeEEecCCc
Q 002278 614 STENLSEKYIVGYGASSTVYKCALK------NSRPIAVKKLYNQY-PHNLREFETELETIGSIRHRNIVSLHGYALSPYG 686 (943)
Q Consensus 614 ~~~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 686 (943)
..++|+..+.||+|+||.||+|.++ .+..||+|++.... .....++.+|+.+++.++||||+++++++.+...
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~ 83 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP 83 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 4678999999999999999999764 24679999885432 2334568899999999999999999999999999
Q ss_pred ceEEEEEccCCChhhhccCCCC-------CccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceee
Q 002278 687 NLLFYDYMVNGSLWDLLHGPSK-------KVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHL 759 (943)
Q Consensus 687 ~~lv~e~~~~g~L~~~l~~~~~-------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl 759 (943)
.++||||+++|+|.+++..... ...+++..+..++.|++.||+|||+. +++||||||+||++++++.+++
T Consensus 84 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~vH~dlkp~Nil~~~~~~~~l 160 (277)
T cd05062 84 TLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKI 160 (277)
T ss_pred eEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCcchheEEEcCCCCEEE
Confidence 9999999999999999864221 23467889999999999999999998 9999999999999999999999
Q ss_pred cccccccccCCCCCce-eeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCccHHHHHHHhccccc
Q 002278 760 SDFGIARCIPTAMPHA-STFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKADDNT 837 (943)
Q Consensus 760 ~DFGla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~ 837 (943)
+|||+++......... .....+++.|+|||++.+..++.++|||||||++|||++ |..||.+........... ...
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~~~~-~~~- 238 (277)
T cd05062 161 GDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFVM-EGG- 238 (277)
T ss_pred CCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH-cCC-
Confidence 9999997653322111 112235778999999998899999999999999999999 788987654432222111 111
Q ss_pred cccccCcccccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 002278 838 VMEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLV 885 (943)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~ 885 (943)
.. .... .....+.+++.+|++.+|++|||+.|++++++
T Consensus 239 ~~-----~~~~-----~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~ 276 (277)
T cd05062 239 LL-----DKPD-----NCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 276 (277)
T ss_pred cC-----CCCC-----CCCHHHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence 11 1111 11246778999999999999999999999875
No 141
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=4.3e-36 Score=347.24 Aligned_cols=256 Identities=21% Similarity=0.279 Sum_probs=205.1
Q ss_pred HHhhccccceEEeeeceEEEEEEEec-CCceEEEEEecccC--cccHHHHHHHHHHHhcCCCCCcceeeeEEecCC----
Q 002278 613 RSTENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQY--PHNLREFETELETIGSIRHRNIVSLHGYALSPY---- 685 (943)
Q Consensus 613 ~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~---- 685 (943)
...++|.+.+.||+|+||+||+|+.. +++.||||++.... ......+.+|+..+..++|+||+++++.+...+
T Consensus 29 ~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~ 108 (496)
T PTZ00283 29 EQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNP 108 (496)
T ss_pred ccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCc
Confidence 34579999999999999999999865 68899999986432 334456788999999999999999988775432
Q ss_pred ----cceEEEEEccCCChhhhccCC-CCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeec
Q 002278 686 ----GNLLFYDYMVNGSLWDLLHGP-SKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLS 760 (943)
Q Consensus 686 ----~~~lv~e~~~~g~L~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~ 760 (943)
..++||||+++|+|.+++... .....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 109 ~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~---~IiHrDLKP~NILl~~~~~vkL~ 185 (496)
T PTZ00283 109 ENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSK---HMIHRDIKSANILLCSNGLVKLG 185 (496)
T ss_pred ccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEeCCCCEEEE
Confidence 257999999999999988632 2234689999999999999999999999 99999999999999999999999
Q ss_pred ccccccccCCCCC-ceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccc
Q 002278 761 DFGIARCIPTAMP-HASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVM 839 (943)
Q Consensus 761 DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~ 839 (943)
|||+++.+..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.................
T Consensus 186 DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~~~~~~--- 262 (496)
T PTZ00283 186 DFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTLAGRY--- 262 (496)
T ss_pred ecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCC---
Confidence 9999987643221 122345699999999999999999999999999999999999999987654332222221111
Q ss_pred cccCcccccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002278 840 EAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARV 883 (943)
Q Consensus 840 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~ 883 (943)
...++.+ ...+.+++..||+.||++||++.+++++
T Consensus 263 ~~~~~~~---------~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 263 DPLPPSI---------SPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred CCCCCCC---------CHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 1111111 2467789999999999999999999876
No 142
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=1.1e-35 Score=321.92 Aligned_cols=256 Identities=27% Similarity=0.415 Sum_probs=203.0
Q ss_pred hccccceEEeeeceEEEEEEEec-----CCceEEEEEecccCc-ccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceE
Q 002278 616 ENLSEKYIVGYGASSTVYKCALK-----NSRPIAVKKLYNQYP-HNLREFETELETIGSIRHRNIVSLHGYALSPYGNLL 689 (943)
Q Consensus 616 ~~~~~~~~lG~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 689 (943)
+.|+..+.||+|+||.||+|... .+..||+|.+..... .....+.+|+++++.++||||+++++++......++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 84 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCM 84 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEE
Confidence 46778889999999999999852 457899999875432 334678899999999999999999999999999999
Q ss_pred EEEEccCCChhhhccCCC--------------CCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCC
Q 002278 690 FYDYMVNGSLWDLLHGPS--------------KKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENF 755 (943)
Q Consensus 690 v~e~~~~g~L~~~l~~~~--------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~ 755 (943)
||||+++|+|.+++.... ....+++.++..++.|++.||+|||++ +++||||||+||++++++
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~nili~~~~ 161 (283)
T cd05090 85 LFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSH---FFVHKDLAARNILIGEQL 161 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhc---CeehhccccceEEEcCCC
Confidence 999999999999885221 123578999999999999999999999 999999999999999999
Q ss_pred ceeecccccccccCCCCC-ceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCccHHHHHHHhc
Q 002278 756 DAHLSDFGIARCIPTAMP-HASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKA 833 (943)
Q Consensus 756 ~~kl~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~ 833 (943)
.+||+|||+++....... .......++..|+|||+..+..++.++|||||||++|||++ |..||.+..... ......
T Consensus 162 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~-~~~~~~ 240 (283)
T cd05090 162 HVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQE-VIEMVR 240 (283)
T ss_pred cEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHH-HHHHHH
Confidence 999999999986533221 11222335678999999998889999999999999999999 999997654322 222221
Q ss_pred cccccccccCcccccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhh
Q 002278 834 DDNTVMEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLVS 886 (943)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~ 886 (943)
... ... .... ....+.+++..|++.||++||++.++.+++..
T Consensus 241 ~~~-~~~-~~~~---------~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 241 KRQ-LLP-CSED---------CPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred cCC-cCC-CCCC---------CCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 111 110 1111 12467789999999999999999999998864
No 143
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=1.9e-35 Score=315.96 Aligned_cols=253 Identities=28% Similarity=0.387 Sum_probs=204.5
Q ss_pred hccccceEEeeeceEEEEEEEecCCceEEEEEecccCcccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEEcc
Q 002278 616 ENLSEKYIVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMV 695 (943)
Q Consensus 616 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 695 (943)
++|...+.||+|++|.||+|.+..+..+|+|++.... ...+.+.+|+++++.++|||++++++++. .+..+++|||++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~ 83 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEFMG 83 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEcCC
Confidence 5688889999999999999998877789999876432 34567889999999999999999999875 456899999999
Q ss_pred CCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCCce
Q 002278 696 NGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHA 775 (943)
Q Consensus 696 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~~~ 775 (943)
+|+|.+++... ....+++..+..++.|++.||+|||+. +++||||||+||++++++.++|+|||.++.........
T Consensus 84 ~~~L~~~~~~~-~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~~ 159 (260)
T cd05069 84 KGSLLDFLKEG-DGKYLKLPQLVDMAAQIADGMAYIERM---NYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTA 159 (260)
T ss_pred CCCHHHHHhhC-CCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCeEEECCCccceEccCCcccc
Confidence 99999998642 233578999999999999999999998 99999999999999999999999999998764332222
Q ss_pred eeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCccHHHHHHHhccccccccccCcccccCccCHH
Q 002278 776 STFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLS 854 (943)
Q Consensus 776 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 854 (943)
.....++..|+|||+..+..++.++|||||||++|||+| |+.||.+............ .... .... .
T Consensus 160 ~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~-~~~~--~~~~---------~ 227 (260)
T cd05069 160 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVER-GYRM--PCPQ---------G 227 (260)
T ss_pred cCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc-CCCC--CCCc---------c
Confidence 222335678999999998899999999999999999999 9999987654433322211 1110 0111 1
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHHHhh
Q 002278 855 AVRKTFQLALLCTKRYPSERPTMQEVARVLVS 886 (943)
Q Consensus 855 ~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~ 886 (943)
....+.+++.+||+++|++||+++++.+.|+.
T Consensus 228 ~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 228 CPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred cCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 22567889999999999999999999999875
No 144
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=9e-36 Score=324.56 Aligned_cols=253 Identities=22% Similarity=0.312 Sum_probs=208.2
Q ss_pred hhccccceEEeeeceEEEEEEEec-CCceEEEEEecccCcccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEE
Q 002278 615 TENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDY 693 (943)
Q Consensus 615 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 693 (943)
..+|+..+.||+|+||.||+|... +++.||+|.+..........+.+|+.+++.++||||+++++++......++||||
T Consensus 19 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~ 98 (296)
T cd06654 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 98 (296)
T ss_pred ccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeecc
Confidence 457888899999999999999965 5789999998766555567888999999999999999999999999999999999
Q ss_pred ccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCC
Q 002278 694 MVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMP 773 (943)
Q Consensus 694 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~ 773 (943)
+++++|.+++. ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++........
T Consensus 99 ~~~~~L~~~~~----~~~~~~~~~~~i~~ql~~aL~~LH~~---gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~ 171 (296)
T cd06654 99 LAGGSLTDVVT----ETCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS 171 (296)
T ss_pred cCCCCHHHHHH----hcCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEECccccchhcccccc
Confidence 99999999985 23578999999999999999999999 999999999999999999999999999886543322
Q ss_pred ceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccccCccCH
Q 002278 774 HASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDL 853 (943)
Q Consensus 774 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 853 (943)
. .....|++.|+|||.+.+..++.++|||||||++|+|++|+.||........+.......... ....+
T Consensus 172 ~-~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~~~~~~-~~~~~--------- 240 (296)
T cd06654 172 K-RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPE-LQNPE--------- 240 (296)
T ss_pred c-cCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHhcCCCCC-CCCcc---------
Confidence 1 222358899999999998889999999999999999999999998766544333222111110 00011
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 002278 854 SAVRKTFQLALLCTKRYPSERPTMQEVARVLV 885 (943)
Q Consensus 854 ~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~ 885 (943)
.....+.+++.+||..+|++||++.+++++-+
T Consensus 241 ~~~~~l~~li~~~l~~~p~~Rpt~~eil~~~~ 272 (296)
T cd06654 241 KLSAIFRDFLNRCLDMDVEKRGSAKELLQHQF 272 (296)
T ss_pred ccCHHHHHHHHHHCcCCcccCcCHHHHhhChh
Confidence 12245778999999999999999999998754
No 145
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=1.4e-35 Score=320.28 Aligned_cols=259 Identities=23% Similarity=0.348 Sum_probs=201.8
Q ss_pred hccccceEEeeeceEEEEEEEecC-Cc----eEEEEEecccCc-ccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceE
Q 002278 616 ENLSEKYIVGYGASSTVYKCALKN-SR----PIAVKKLYNQYP-HNLREFETELETIGSIRHRNIVSLHGYALSPYGNLL 689 (943)
Q Consensus 616 ~~~~~~~~lG~G~~g~Vy~~~~~~-~~----~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 689 (943)
++|+..+.||+|+||+||+|.+.. ++ ++++|++..... ....++..|+..+++++||||+++++++.. ...++
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~-~~~~~ 85 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG-ASLQL 85 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECC-CccEE
Confidence 467788899999999999999753 43 477777753322 234567788889999999999999998754 56789
Q ss_pred EEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccC
Q 002278 690 FYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIP 769 (943)
Q Consensus 690 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~ 769 (943)
++||+++|+|.+++.. ....+++..+..++.|++.||+|||+. +++||||||+||++++++.+||+|||+++...
T Consensus 86 i~e~~~~gsL~~~l~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~ 160 (279)
T cd05111 86 VTQLSPLGSLLDHVRQ--HRDSLDPQRLLNWCVQIAKGMYYLEEH---RMVHRNLAARNILLKSDSIVQIADFGVADLLY 160 (279)
T ss_pred EEEeCCCCcHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEEcCCccceecc
Confidence 9999999999999963 234689999999999999999999999 99999999999999999999999999998764
Q ss_pred CCCC-ceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCccHHHHHHHhccccccccccCcccc
Q 002278 770 TAMP-HASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKADDNTVMEAVDPEVS 847 (943)
Q Consensus 770 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 847 (943)
.... .......++..|+|||++.+..++.++|||||||++||++| |+.||.+...... ........... .+..
T Consensus 161 ~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~-~~~~~~~~~~~---~~~~- 235 (279)
T cd05111 161 PDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEV-PDLLEKGERLA---QPQI- 235 (279)
T ss_pred CCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHH-HHHHHCCCcCC---CCCC-
Confidence 3321 11223446788999999998899999999999999999998 9999976543221 11111111111 0111
Q ss_pred cCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcCCCCC
Q 002278 848 VTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLVSLLPAPP 892 (943)
Q Consensus 848 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~~~~~~~ 892 (943)
....+..++..||..+|++|||+.|+++.+..+...++
T Consensus 236 -------~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~~~~ 273 (279)
T cd05111 236 -------CTIDVYMVMVKCWMIDENVRPTFKELANEFTRMARDPP 273 (279)
T ss_pred -------CCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHhCCc
Confidence 11356788999999999999999999999988765443
No 146
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=100.00 E-value=1.8e-39 Score=346.61 Aligned_cols=363 Identities=25% Similarity=0.421 Sum_probs=271.6
Q ss_pred EEEEEcCCCCCcc-ccCCCcCCCCCCCEEEeeCCcccccCCCCccCCCCCcEEeccCCCcCCccchhccccccceEEEec
Q 002278 40 VVSLNLSSLNLGG-EISPSIGDLRNLQSIDFQGNKLTGQIPDEIGNCGSLVHIELSDNSLYGDIPFSISKLKQLEFLNLK 118 (943)
Q Consensus 40 v~~L~l~~~~~~~-~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 118 (943)
|...|+++|.++| .+|.+...+++++.|.|...++. .+|+.++.|.+|++|.+++|++. .+-..++.|+.|+.+.+.
T Consensus 9 VrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~-~vhGELs~Lp~LRsv~~R 86 (1255)
T KOG0444|consen 9 VRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLI-SVHGELSDLPRLRSVIVR 86 (1255)
T ss_pred eecccccCCcCCCCcCchhHHHhhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhH-hhhhhhccchhhHHHhhh
Confidence 6678999999995 79999999999999999999999 99999999999999999999998 677789999999999999
Q ss_pred Ccccc-cCCCcccCCCCCCcEEEEeccccccccchhccccccceeccccCCccCCCCCcccccccccceeeccceecccc
Q 002278 119 NNQLT-GPIPSTLTQIPNLKTLDLARNQLTGEIPRLIYWNEVLQYLGLRGNALTGMLSPDMCQLTGLWYFDVRGNNLTGT 197 (943)
Q Consensus 119 ~n~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~ 197 (943)
+|++. .-+|..+.++..|+.||||+|++. ..|..+...+++-.|+|++|+|..|+..-|-+|+.|-.||||+|++. .
T Consensus 87 ~N~LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~IetIPn~lfinLtDLLfLDLS~NrLe-~ 164 (1255)
T KOG0444|consen 87 DNNLKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIETIPNSLFINLTDLLFLDLSNNRLE-M 164 (1255)
T ss_pred ccccccCCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccccCCchHHHhhHhHhhhccccchhh-h
Confidence 99986 357888999999999999999999 78999999999999999999999999999999999999999999998 6
Q ss_pred cCCCCcCCCcccEEEeecccccCcCCCCCCcceEeEEEecCccccccCCccccccCCCcEEecCCCCCC-CCCCcccCCC
Q 002278 198 IPDSIGNCTSFEILDISYNQITGEIPYNIGFLQVATLSLQGNKLTGKIPEVIGLMQALAVLDLSENELV-GPIPPILGNL 276 (943)
Q Consensus 198 ~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~-~~~~~~~~~l 276 (943)
+|..+..+..|++|+|++|.+..- ++ ..+..|++|++|.+++.+-+ ..+|..+..+
T Consensus 165 LPPQ~RRL~~LqtL~Ls~NPL~hf------------------QL-----rQLPsmtsL~vLhms~TqRTl~N~Ptsld~l 221 (1255)
T KOG0444|consen 165 LPPQIRRLSMLQTLKLSNNPLNHF------------------QL-----RQLPSMTSLSVLHMSNTQRTLDNIPTSLDDL 221 (1255)
T ss_pred cCHHHHHHhhhhhhhcCCChhhHH------------------HH-----hcCccchhhhhhhcccccchhhcCCCchhhh
Confidence 777889999999999999987510 11 11234677888888876543 2456666666
Q ss_pred CCcceEEecCCCCCCCCCCCcCCCCcCcEEEcccCccccccccccCCcccceEEEccccccCCcCcccccCCCcCcEEEe
Q 002278 277 SYTGKLYLHGNKLTGPIPPELGNMSKLSYLQLQNNQLVGTIPAELGKLEQLFELNLADNNLEGPIPHNISSCTALNQFNV 356 (943)
Q Consensus 277 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 356 (943)
.+|..++|+.|.+. ..|+.+.++.+|+.|+||+|+|+ .+....+...+|++|+||.|+++ ..|+.++.++.|+.|++
T Consensus 222 ~NL~dvDlS~N~Lp-~vPecly~l~~LrrLNLS~N~it-eL~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~ 298 (1255)
T KOG0444|consen 222 HNLRDVDLSENNLP-IVPECLYKLRNLRRLNLSGNKIT-ELNMTEGEWENLETLNLSRNQLT-VLPDAVCKLTKLTKLYA 298 (1255)
T ss_pred hhhhhccccccCCC-cchHHHhhhhhhheeccCcCcee-eeeccHHHHhhhhhhccccchhc-cchHHHhhhHHHHHHHh
Confidence 66666666666666 56666666666666666666666 33344444555666666666665 44555555555555555
Q ss_pred eCCcccCcccccccccCccceeeccCCcCCCCCCCCCCCCCCccEEecCCCcCCCccCCCcccccccceeeccccccccc
Q 002278 357 HGNRLSGAIPSSFRNLGSLTYLNLSRNNFKGKVPTELGRIINLDTLDLSVNNFSGSVPASIGDLEHLLTLNLSRNHLNGL 436 (943)
Q Consensus 357 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 436 (943)
.+|+++- . -+|..++.+.+|+++..++|.+. .+|+.++.+..|+.|.|++|++. .
T Consensus 299 n~NkL~F----------------------e-GiPSGIGKL~~Levf~aanN~LE-lVPEglcRC~kL~kL~L~~NrLi-T 353 (1255)
T KOG0444|consen 299 NNNKLTF----------------------E-GIPSGIGKLIQLEVFHAANNKLE-LVPEGLCRCVKLQKLKLDHNRLI-T 353 (1255)
T ss_pred ccCcccc----------------------c-CCccchhhhhhhHHHHhhccccc-cCchhhhhhHHHHHhccccccee-e
Confidence 5554431 1 14555666666666666666655 55666666666666666666665 4
Q ss_pred CCccccCCCccceecccCccc
Q 002278 437 LPAEFGNLRSIQTIDMSFNQL 457 (943)
Q Consensus 437 ~p~~~~~l~~L~~L~Ls~N~l 457 (943)
+|+.+.-|+.|+.|||..|.-
T Consensus 354 LPeaIHlL~~l~vLDlreNpn 374 (1255)
T KOG0444|consen 354 LPEAIHLLPDLKVLDLRENPN 374 (1255)
T ss_pred chhhhhhcCCcceeeccCCcC
Confidence 566666666666666666643
No 147
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=3.9e-36 Score=336.89 Aligned_cols=262 Identities=23% Similarity=0.256 Sum_probs=201.7
Q ss_pred HhhccccceEEeeeceEEEEEEEec-CCceEEEEEecccC--cccHHHHHHHHHHHhcCCCCCcceeeeEEecCC-----
Q 002278 614 STENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQY--PHNLREFETELETIGSIRHRNIVSLHGYALSPY----- 685 (943)
Q Consensus 614 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----- 685 (943)
..++|+..+.||+|+||.||+|.++ .++.||+|++.... ......+.+|+.+++.++||||+++++++....
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 98 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEF 98 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccc
Confidence 4578999999999999999999975 57899999986432 234566789999999999999999999986543
Q ss_pred -cceEEEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeeccccc
Q 002278 686 -GNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGI 764 (943)
Q Consensus 686 -~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGl 764 (943)
..++||||+.+ ++.+.+. ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 99 ~~~~lv~e~~~~-~l~~~~~-----~~~~~~~~~~~~~qi~~~L~~LH~~---~ivHrDlkp~NIl~~~~~~~kl~Dfg~ 169 (359)
T cd07876 99 QDVYLVMELMDA-NLCQVIH-----MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGL 169 (359)
T ss_pred ceeEEEEeCCCc-CHHHHHh-----ccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEecCCC
Confidence 46899999965 5666553 2478899999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhcccccccc----
Q 002278 765 ARCIPTAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVME---- 840 (943)
Q Consensus 765 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~---- 840 (943)
++...... ......||+.|+|||++.+..++.++||||+||++|||+||+.||.+.+....+.......+....
T Consensus 170 a~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (359)
T cd07876 170 ARTACTNF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMN 247 (359)
T ss_pred ccccccCc--cCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHH
Confidence 97653321 122345899999999999999999999999999999999999999876654443322211111000
Q ss_pred ----------------------ccCcccccC---ccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhh
Q 002278 841 ----------------------AVDPEVSVT---CVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLVS 886 (943)
Q Consensus 841 ----------------------~~~~~~~~~---~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~ 886 (943)
...+..... .........+.+++.+|+..||++|||+.|+++|-+-
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~ 318 (359)
T cd07876 248 RLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPYI 318 (359)
T ss_pred HHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCchh
Confidence 000000000 0000112456789999999999999999999998653
No 148
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=1.2e-35 Score=318.11 Aligned_cols=253 Identities=25% Similarity=0.352 Sum_probs=205.5
Q ss_pred hccccceEEeeeceEEEEEEEec-CCceEEEEEecccCc-----ccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceE
Q 002278 616 ENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQYP-----HNLREFETELETIGSIRHRNIVSLHGYALSPYGNLL 689 (943)
Q Consensus 616 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 689 (943)
++|...+.||+|++|.||.|... ++++||+|.+..... .....+.+|++++++++||||+++++++.+++..++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 56888999999999999999865 578999998864321 123568889999999999999999999999999999
Q ss_pred EEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccC
Q 002278 690 FYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIP 769 (943)
Q Consensus 690 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~ 769 (943)
|+||+++++|.+++. ....+++..+..++.|++.|++|||+. +|+||||+|+||++++++.++|+|||+++...
T Consensus 82 v~e~~~~~~l~~~~~---~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~ 155 (263)
T cd06625 82 FMEYMPGGSVKDQLK---AYGALTETVTRKYTRQILEGVEYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKRLQ 155 (263)
T ss_pred EEEECCCCcHHHHHH---HhCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceecc
Confidence 999999999999886 344688999999999999999999999 99999999999999999999999999997654
Q ss_pred CCCCcee--eeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccc
Q 002278 770 TAMPHAS--TFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVS 847 (943)
Q Consensus 770 ~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 847 (943)
....... ....|+..|+|||+..+..++.++||||+|+++|||++|+.||.................. ..+...
T Consensus 156 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~-- 231 (263)
T cd06625 156 TICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTN--PQLPSH-- 231 (263)
T ss_pred ccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHHHHHHhccCCC--CCCCcc--
Confidence 3221111 2234788999999999988999999999999999999999999876554443332221111 111111
Q ss_pred cCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 002278 848 VTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLV 885 (943)
Q Consensus 848 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~ 885 (943)
....+.+++..||..+|++|||+.+++++.+
T Consensus 232 -------~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~ 262 (263)
T cd06625 232 -------VSPDARNFLRRTFVENAKKRPSAEELLRHFF 262 (263)
T ss_pred -------CCHHHHHHHHHHhhcCcccCCCHHHHhhCCC
Confidence 1245678999999999999999999998743
No 149
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=4.7e-36 Score=330.67 Aligned_cols=247 Identities=19% Similarity=0.261 Sum_probs=198.0
Q ss_pred ccccceEEeeeceEEEEEEEec-CCceEEEEEecccC---cccHHHHHHHHHHHhcCC-CCCcceeeeEEecCCcceEEE
Q 002278 617 NLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQY---PHNLREFETELETIGSIR-HRNIVSLHGYALSPYGNLLFY 691 (943)
Q Consensus 617 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~ 691 (943)
+|+..+.||+|+||+||+|..+ +++.||+|++.... ....+.+..|.++++.+. |++|+++++++.+.+..++||
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 3677889999999999999976 57889999986432 233456778888888886 577888999999999999999
Q ss_pred EEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCC
Q 002278 692 DYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTA 771 (943)
Q Consensus 692 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~ 771 (943)
||+++|+|.+++. ....+++.++..++.|++.||+|||++ +|+||||||+||++++++.+||+|||+++.....
T Consensus 81 Ey~~~g~L~~~i~---~~~~l~~~~~~~i~~qi~~al~~lH~~---~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~ 154 (323)
T cd05615 81 EYVNGGDLMYHIQ---QVGKFKEPQAVFYAAEISVGLFFLHRR---GIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVD 154 (323)
T ss_pred cCCCCCcHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeccccccccCCC
Confidence 9999999999986 345689999999999999999999999 9999999999999999999999999998754322
Q ss_pred CCceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccccCcc
Q 002278 772 MPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCV 851 (943)
Q Consensus 772 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 851 (943)
.. ......||+.|+|||++.+..++.++||||+||++|||++|+.||.+.................+. .+
T Consensus 155 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~~~p~----~~----- 224 (323)
T cd05615 155 GV-TTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPK----SL----- 224 (323)
T ss_pred Cc-cccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCc----cC-----
Confidence 11 222345899999999999999999999999999999999999999876544333332222111111 11
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCH-----HHHHHH
Q 002278 852 DLSAVRKTFQLALLCTKRYPSERPTM-----QEVARV 883 (943)
Q Consensus 852 ~~~~~~~l~~l~~~cl~~dP~~RPt~-----~el~~~ 883 (943)
...+.+++.+|++.+|++|++. .++.+|
T Consensus 225 ----~~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h 257 (323)
T cd05615 225 ----SKEAVSICKGLMTKHPSKRLGCGPEGERDIREH 257 (323)
T ss_pred ----CHHHHHHHHHHcccCHhhCCCCCCCCHHHHhcC
Confidence 1356789999999999999974 556554
No 150
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=5.8e-36 Score=331.42 Aligned_cols=261 Identities=26% Similarity=0.374 Sum_probs=203.7
Q ss_pred hhccccceEEeeeceEEEEEEEec------CCceEEEEEecccCc-ccHHHHHHHHHHHhcC-CCCCcceeeeEEecC-C
Q 002278 615 TENLSEKYIVGYGASSTVYKCALK------NSRPIAVKKLYNQYP-HNLREFETELETIGSI-RHRNIVSLHGYALSP-Y 685 (943)
Q Consensus 615 ~~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~-~ 685 (943)
.++|++.+.||+|+||.||+|... .++.||+|++..... .....+.+|+++++++ +||||+++++++... .
T Consensus 6 ~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~ 85 (337)
T cd05054 6 RDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGG 85 (337)
T ss_pred HHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCC
Confidence 457899999999999999999743 246899998864432 2345677899999999 799999999988654 4
Q ss_pred cceEEEEEccCCChhhhccCCCC---------------------------------------------------------
Q 002278 686 GNLLFYDYMVNGSLWDLLHGPSK--------------------------------------------------------- 708 (943)
Q Consensus 686 ~~~lv~e~~~~g~L~~~l~~~~~--------------------------------------------------------- 708 (943)
..+++|||+++|+|.+++.....
T Consensus 86 ~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (337)
T cd05054 86 PLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDEL 165 (337)
T ss_pred CEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHH
Confidence 57889999999999998853211
Q ss_pred -CccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCCc-eeeeEeccccee
Q 002278 709 -KVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPH-ASTFVLGTIGYI 786 (943)
Q Consensus 709 -~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~~-~~~~~~gt~~y~ 786 (943)
...+++..+..++.||+.||+|||+. +|+||||||+||++++++.++|+|||+++.+...... ......++..|+
T Consensus 166 ~~~~l~~~~~~~~~~qi~~aL~~lH~~---~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~ 242 (337)
T cd05054 166 YKEPLTLEDLISYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWM 242 (337)
T ss_pred hhcCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCcccc
Confidence 12688999999999999999999999 9999999999999999999999999999876433221 122234577899
Q ss_pred CccccccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCccHHHHHHHhccccccccccCcccccCccCHHHHHHHHHHHHH
Q 002278 787 DPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAVRKTFQLALL 865 (943)
Q Consensus 787 aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ 865 (943)
|||++.+..++.++|||||||++|||++ |+.||.+................ +..+. .....+.+++.+
T Consensus 243 aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~------~~~~~-----~~~~~~~~l~~~ 311 (337)
T cd05054 243 APESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGTR------MRAPE-----YATPEIYSIMLD 311 (337)
T ss_pred CcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhccCC------CCCCc-----cCCHHHHHHHHH
Confidence 9999999999999999999999999998 99999764332222222111111 00110 112467899999
Q ss_pred ccCCCCCCCCCHHHHHHHHhhcCC
Q 002278 866 CTKRYPSERPTMQEVARVLVSLLP 889 (943)
Q Consensus 866 cl~~dP~~RPt~~el~~~L~~~~~ 889 (943)
||+.+|++||++.+++++|+.+..
T Consensus 312 cl~~~p~~RPs~~ell~~l~~~~~ 335 (337)
T cd05054 312 CWHNNPEDRPTFSELVEILGDLLQ 335 (337)
T ss_pred HccCChhhCcCHHHHHHHHHHHHh
Confidence 999999999999999999987654
No 151
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=3.2e-36 Score=332.65 Aligned_cols=238 Identities=22% Similarity=0.270 Sum_probs=189.8
Q ss_pred eEEeeeceEEEEEEEec-CCceEEEEEecccC---cccHHHHHHHHH-HHhcCCCCCcceeeeEEecCCcceEEEEEccC
Q 002278 622 YIVGYGASSTVYKCALK-NSRPIAVKKLYNQY---PHNLREFETELE-TIGSIRHRNIVSLHGYALSPYGNLLFYDYMVN 696 (943)
Q Consensus 622 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 696 (943)
+.||+|+||+||+|+++ +++.||+|.+.... ......+..|.. +++.++||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 36999999999999976 46789999986432 122234444444 56788999999999999999999999999999
Q ss_pred CChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCCcee
Q 002278 697 GSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHAS 776 (943)
Q Consensus 697 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~~~~ 776 (943)
|+|.+++. ....+.+..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....... ..
T Consensus 81 ~~L~~~~~---~~~~~~~~~~~~~~~qi~~~L~~lH~~---giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~-~~ 153 (325)
T cd05602 81 GELFYHLQ---RERCFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNG-TT 153 (325)
T ss_pred CcHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEEccCCCCcccccCCC-Cc
Confidence 99999986 345678889999999999999999999 999999999999999999999999999975432221 22
Q ss_pred eeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccccCccCHHHH
Q 002278 777 TFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAV 856 (943)
Q Consensus 777 ~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 856 (943)
....||+.|+|||++.+..++.++||||+||++|||++|+.||.+......+........ ...+.+.
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~----~~~~~~~--------- 220 (325)
T cd05602 154 STFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPL----QLKPNIT--------- 220 (325)
T ss_pred ccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHhCCc----CCCCCCC---------
Confidence 345699999999999999999999999999999999999999987655443332222111 1122221
Q ss_pred HHHHHHHHHccCCCCCCCCCHHH
Q 002278 857 RKTFQLALLCTKRYPSERPTMQE 879 (943)
Q Consensus 857 ~~l~~l~~~cl~~dP~~RPt~~e 879 (943)
..+.+++..|++.||.+||++.+
T Consensus 221 ~~~~~li~~~l~~~p~~R~~~~~ 243 (325)
T cd05602 221 NSARHLLEGLLQKDRTKRLGAKD 243 (325)
T ss_pred HHHHHHHHHHcccCHHHCCCCCC
Confidence 35678999999999999998763
No 152
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=5e-36 Score=330.58 Aligned_cols=242 Identities=21% Similarity=0.231 Sum_probs=190.7
Q ss_pred eEEeeeceEEEEEEEec-CCceEEEEEecccC---cccHHHHHHHHH-HHhcCCCCCcceeeeEEecCCcceEEEEEccC
Q 002278 622 YIVGYGASSTVYKCALK-NSRPIAVKKLYNQY---PHNLREFETELE-TIGSIRHRNIVSLHGYALSPYGNLLFYDYMVN 696 (943)
Q Consensus 622 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 696 (943)
++||+|+||.||+|+.+ +++.||+|.+.+.. ......+.+|.. +++.++||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 36999999999999976 57889999986432 122334555554 57889999999999999999999999999999
Q ss_pred CChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCCcee
Q 002278 697 GSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHAS 776 (943)
Q Consensus 697 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~~~~ 776 (943)
|+|.+.+. ....+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++...... ...
T Consensus 81 ~~L~~~l~---~~~~~~~~~~~~~~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~-~~~ 153 (321)
T cd05603 81 GELFFHLQ---RERCFLEPRARFYAAEVASAIGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPE-ETT 153 (321)
T ss_pred CCHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEccCCCCccCCCCC-Ccc
Confidence 99998886 345688999999999999999999998 99999999999999999999999999987532221 122
Q ss_pred eeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccccCccCHHHH
Q 002278 777 TFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAV 856 (943)
Q Consensus 777 ~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 856 (943)
....||+.|+|||++.+..++.++|||||||++|||++|+.||...+............. .+.+.. .
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~----~~~~~~---------~ 220 (321)
T cd05603 154 STFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHKPL----QLPGGK---------T 220 (321)
T ss_pred ccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHhcCCC----CCCCCC---------C
Confidence 335689999999999998999999999999999999999999987654322222211111 111111 2
Q ss_pred HHHHHHHHHccCCCCCCCCCHH----HHHHH
Q 002278 857 RKTFQLALLCTKRYPSERPTMQ----EVARV 883 (943)
Q Consensus 857 ~~l~~l~~~cl~~dP~~RPt~~----el~~~ 883 (943)
..+.+++..|++.||++||++. ++.++
T Consensus 221 ~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~ 251 (321)
T cd05603 221 VAACDLLVGLLHKDQRRRLGAKADFLEIKNH 251 (321)
T ss_pred HHHHHHHHHHccCCHhhcCCCCCCHHHHhCC
Confidence 4567899999999999999753 55544
No 153
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=2.6e-35 Score=316.31 Aligned_cols=259 Identities=23% Similarity=0.305 Sum_probs=209.0
Q ss_pred hccccceEEeeeceEEEEEEEec-CCceEEEEEecccC---cccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEE
Q 002278 616 ENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQY---PHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFY 691 (943)
Q Consensus 616 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 691 (943)
++|+..+.||+|+||.||+|... +++.||+|.+.... ....+.+.+|++++++++|++|+++++++.+++..++||
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 57888999999999999999987 78899999885322 233567889999999999999999999999999999999
Q ss_pred EEccCCChhhhccCC-CCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCC
Q 002278 692 DYMVNGSLWDLLHGP-SKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPT 770 (943)
Q Consensus 692 e~~~~g~L~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~ 770 (943)
||+++|+|.+++... .....+++.++..++.+++.|++|||+. +|+||||||+||+++.++.++++|||++.....
T Consensus 82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~ 158 (267)
T cd08224 82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSK---RIMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecCCcChhhEEECCCCcEEEeccceeeeccC
Confidence 999999999988532 2234689999999999999999999999 999999999999999999999999999986644
Q ss_pred CCCceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCc-cHHHHHHHhccccccccccCcccccC
Q 002278 771 AMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNES-NLHQLIMSKADDNTVMEAVDPEVSVT 849 (943)
Q Consensus 771 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 849 (943)
.... .....|+..|+|||.+.+..++.++|||||||++|+|++|+.||.... ........... . ..+..+
T Consensus 159 ~~~~-~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~-~-----~~~~~~-- 229 (267)
T cd08224 159 KTTA-AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEK-C-----DYPPLP-- 229 (267)
T ss_pred CCcc-cceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhhhc-C-----CCCCCC--
Confidence 3222 223458899999999998889999999999999999999999996443 22222111111 1 111111
Q ss_pred ccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcC
Q 002278 850 CVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLVSLL 888 (943)
Q Consensus 850 ~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~~~ 888 (943)
.......+.+++..||+.+|++|||+.++++.++.+.
T Consensus 230 --~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 230 --ADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred --hhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence 1122346778999999999999999999999988653
No 154
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=9.9e-36 Score=319.57 Aligned_cols=258 Identities=22% Similarity=0.309 Sum_probs=207.2
Q ss_pred hccccceEEeeeceEEEEEEEec-CCceEEEEEecccC---cccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEE
Q 002278 616 ENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQY---PHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFY 691 (943)
Q Consensus 616 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 691 (943)
++|+..+.||+|+||.||+|..+ +++.+|||++.... .....++.+|+++++.++||||+++++++.+++..+++|
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence 46778889999999999999964 68899999876432 223457889999999999999999999999999999999
Q ss_pred EEccCCChhhhccCC-CCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCC
Q 002278 692 DYMVNGSLWDLLHGP-SKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPT 770 (943)
Q Consensus 692 e~~~~g~L~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~ 770 (943)
||+++++|.+++... .....+++.++..++.|++.|++|||+. +++|+||||+||+++.++.++++|||++.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd08229 82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEECcchhhhcccc
Confidence 999999999988632 1235689999999999999999999999 999999999999999999999999999987644
Q ss_pred CCCceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCcc-HHHHHHHhccccccccccCcccccC
Q 002278 771 AMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESN-LHQLIMSKADDNTVMEAVDPEVSVT 849 (943)
Q Consensus 771 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 849 (943)
.... .....|+..|+|||+..+..++.++||||||+++|||++|..||..... .......... ...+....
T Consensus 159 ~~~~-~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~------~~~~~~~~- 230 (267)
T cd08229 159 KTTA-AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQ------CDYPPLPS- 230 (267)
T ss_pred CCcc-cccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhhhhhc------CCCCCCCc-
Confidence 3222 2234588999999999988899999999999999999999999975432 1121111111 01111111
Q ss_pred ccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhc
Q 002278 850 CVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLVSL 887 (943)
Q Consensus 850 ~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~~ 887 (943)
......+.+++.+||+.+|++|||+.+|++.++++
T Consensus 231 ---~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~ 265 (267)
T cd08229 231 ---DHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRM 265 (267)
T ss_pred ---ccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhh
Confidence 11235678899999999999999999999998765
No 155
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=7.7e-36 Score=327.46 Aligned_cols=264 Identities=20% Similarity=0.250 Sum_probs=202.0
Q ss_pred hccccceEEeeeceEEEEEEEec-CCceEEEEEecccC-cccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEE
Q 002278 616 ENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQY-PHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDY 693 (943)
Q Consensus 616 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 693 (943)
++|...+.||+|+||.||+|+.+ +++.||+|++.... ......+.+|++++++++||||+++++++..++..++||||
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 85 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEY 85 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeC
Confidence 57889999999999999999976 56789999886443 23344677899999999999999999999999999999999
Q ss_pred ccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCC
Q 002278 694 MVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMP 773 (943)
Q Consensus 694 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~ 773 (943)
+++ +|.+++.. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 86 ~~~-~l~~~~~~--~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~ 159 (309)
T cd07872 86 LDK-DLKQYMDD--CGNIMSMHNVKIFLYQILRGLAYCHRR---KVLHRDLKPQNLLINERGELKLADFGLARAKSVPTK 159 (309)
T ss_pred CCC-CHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECccccceecCCCcc
Confidence 974 88887753 234578999999999999999999999 999999999999999999999999999976533222
Q ss_pred ceeeeEecccceeCcccccc-CCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccc-----
Q 002278 774 HASTFVLGTIGYIDPEYAHT-SRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVS----- 847 (943)
Q Consensus 774 ~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 847 (943)
. .....+++.|+|||++.+ ..++.++||||+||++|||+||+.||.+.+............+......++.+.
T Consensus 160 ~-~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (309)
T cd07872 160 T-YSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEF 238 (309)
T ss_pred c-cccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhh
Confidence 1 222357899999998865 468899999999999999999999998665433322222111111110000000
Q ss_pred ------cCc------cCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhh
Q 002278 848 ------VTC------VDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLVS 886 (943)
Q Consensus 848 ------~~~------~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~ 886 (943)
... ........+.+++.+|++.||.+|||+.|+++|-+-
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~~ 289 (309)
T cd07872 239 KNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAYF 289 (309)
T ss_pred hhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcChhh
Confidence 000 000112456789999999999999999999987653
No 156
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.3e-38 Score=333.69 Aligned_cols=254 Identities=21% Similarity=0.303 Sum_probs=211.3
Q ss_pred hccccceEEeeeceEEEEEEEecCCceE-EEEEecccCcccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEEc
Q 002278 616 ENLSEKYIVGYGASSTVYKCALKNSRPI-AVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYM 694 (943)
Q Consensus 616 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~v-avK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 694 (943)
+-|.++..||.|+||.||+|..++.... |.|++.....+..+++.-|+++|+.+.||+||++++.|..+...+|+.|||
T Consensus 32 d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC 111 (1187)
T KOG0579|consen 32 DHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFC 111 (1187)
T ss_pred HHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeec
Confidence 4456677799999999999998865544 667776667777889999999999999999999999999999999999999
Q ss_pred cCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCCc
Q 002278 695 VNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPH 774 (943)
Q Consensus 695 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~~ 774 (943)
.||-+..++-. -...+.+.++..+++|++.||.|||+. +|||||||+.|||++-+|.++++|||.+....... .
T Consensus 112 ~GGAVDaimlE--L~r~LtE~QIqvvc~q~ldALn~LHs~---~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t~-q 185 (1187)
T KOG0579|consen 112 GGGAVDAIMLE--LGRVLTEDQIQVVCYQVLDALNWLHSQ---NIIHRDLKAGNILLTLDGDIRLADFGVSAKNKSTR-Q 185 (1187)
T ss_pred CCchHhHHHHH--hccccchHHHHHHHHHHHHHHHHHhhc---chhhhhccccceEEEecCcEeeecccccccchhHH-h
Confidence 99999887753 345689999999999999999999999 99999999999999999999999999986543322 2
Q ss_pred eeeeEecccceeCccccc-----cCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccccC
Q 002278 775 ASTFVLGTIGYIDPEYAH-----TSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVT 849 (943)
Q Consensus 775 ~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 849 (943)
.+..++|||.|||||+.. ..+|+.++||||||++|.||..+.+|-....++-.+..+...+.+.... |.
T Consensus 186 kRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKiaKSePPTLlq--PS---- 259 (1187)
T KOG0579|consen 186 KRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLLQ--PS---- 259 (1187)
T ss_pred hhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHHHhhcCCCcccC--cc----
Confidence 234467999999999754 5689999999999999999999999998877776666655444332211 11
Q ss_pred ccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 002278 850 CVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLV 885 (943)
Q Consensus 850 ~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~ 885 (943)
.....+.++++.|+.++|..||++.++++|-+
T Consensus 260 ----~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~Hpf 291 (1187)
T KOG0579|consen 260 ----HWSRSFSDFLKRCLVKNPRNRPPAAQLLKHPF 291 (1187)
T ss_pred ----hhhhHHHHHHHHHHhcCCccCCCHHHHhhCcc
Confidence 22356778999999999999999999999865
No 157
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=1.2e-35 Score=328.67 Aligned_cols=257 Identities=20% Similarity=0.240 Sum_probs=202.5
Q ss_pred hccccceEEeeeceEEEEEEEec-CCceEEEEEecccC---cccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEE
Q 002278 616 ENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQY---PHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFY 691 (943)
Q Consensus 616 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 691 (943)
++|+..+.||+|+||+||+++.+ .++.||+|.+.+.. ......+.+|..++..++|++|+++++++.+++..++||
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 46888999999999999999976 56789999886421 223445788999999999999999999999999999999
Q ss_pred EEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCC
Q 002278 692 DYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTA 771 (943)
Q Consensus 692 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~ 771 (943)
||+++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 81 Ey~~gg~L~~~l~~~--~~~l~~~~~~~~~~qi~~~L~~lH~~---~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 155 (331)
T cd05624 81 DYYVGGDLLTLLSKF--EDRLPEDMARFYIAEMVLAIHSIHQL---HYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQD 155 (331)
T ss_pred eCCCCCcHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCchHHEEEcCCCCEEEEeccceeeccCC
Confidence 999999999999632 34688999999999999999999999 9999999999999999999999999999876544
Q ss_pred CCceeeeEecccceeCcccccc-----CCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCccc
Q 002278 772 MPHASTFVLGTIGYIDPEYAHT-----SRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEV 846 (943)
Q Consensus 772 ~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 846 (943)
.........||+.|+|||++.+ ..++.++||||+||++|||++|+.||................... .+++.+
T Consensus 156 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~--~~p~~~ 233 (331)
T cd05624 156 GTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERF--QFPSHI 233 (331)
T ss_pred CceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcCCCcc--cCCCcc
Confidence 3333334569999999998875 467889999999999999999999998766544443333222111 011111
Q ss_pred ccCccCHHHHHHHHHHHHHccCCCCCC--CCCHHHHHHHHh
Q 002278 847 SVTCVDLSAVRKTFQLALLCTKRYPSE--RPTMQEVARVLV 885 (943)
Q Consensus 847 ~~~~~~~~~~~~l~~l~~~cl~~dP~~--RPt~~el~~~L~ 885 (943)
. .....+.+++.+|+..++++ |++++++.+|-+
T Consensus 234 ~------~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h~~ 268 (331)
T cd05624 234 T------DVSEEAKDLIQRLICSRERRLGQNGIEDFKKHAF 268 (331)
T ss_pred c------cCCHHHHHHHHHHccCchhhcCCCCHHHHhcCCC
Confidence 1 11245667888888765554 568999988753
No 158
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=3.4e-36 Score=332.38 Aligned_cols=242 Identities=21% Similarity=0.259 Sum_probs=192.8
Q ss_pred eEEeeeceEEEEEEEec-CCceEEEEEecccC---cccHHHHHHHHH-HHhcCCCCCcceeeeEEecCCcceEEEEEccC
Q 002278 622 YIVGYGASSTVYKCALK-NSRPIAVKKLYNQY---PHNLREFETELE-TIGSIRHRNIVSLHGYALSPYGNLLFYDYMVN 696 (943)
Q Consensus 622 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 696 (943)
+.||+|+||.||+|..+ +++.||+|++.... ......+..|.. +++.++||||+++++++..++..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 35899999999999976 57899999986432 223344555555 46789999999999999999999999999999
Q ss_pred CChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCCcee
Q 002278 697 GSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHAS 776 (943)
Q Consensus 697 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~~~~ 776 (943)
|+|.+++. ....+++..+..++.||+.||+|||+. +|+||||||+||++++++.+||+|||+++...... ...
T Consensus 81 ~~L~~~l~---~~~~~~~~~~~~~~~qi~~al~~lH~~---givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~-~~~ 153 (325)
T cd05604 81 GELFFHLQ---RERSFPEPRARFYAAEIASALGYLHSI---NIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQS-DTT 153 (325)
T ss_pred CCHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEeecCCcccCCCCC-CCc
Confidence 99998886 345689999999999999999999999 99999999999999999999999999987542221 122
Q ss_pred eeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccccCccCHHHH
Q 002278 777 TFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAV 856 (943)
Q Consensus 777 ~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 856 (943)
....||+.|+|||++.+..++.++||||+||++|||++|+.||................. ...+.. .
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~~~~----~~~~~~---------~ 220 (325)
T cd05604 154 TTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKPL----VLRPGA---------S 220 (325)
T ss_pred ccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHcCCc----cCCCCC---------C
Confidence 345699999999999999999999999999999999999999987654433322222111 111221 1
Q ss_pred HHHHHHHHHccCCCCCCCCCHH----HHHHH
Q 002278 857 RKTFQLALLCTKRYPSERPTMQ----EVARV 883 (943)
Q Consensus 857 ~~l~~l~~~cl~~dP~~RPt~~----el~~~ 883 (943)
..+.+++..|++.+|.+||++. ++++|
T Consensus 221 ~~~~~ll~~ll~~~p~~R~~~~~~~~~i~~h 251 (325)
T cd05604 221 LTAWSILEELLEKDRQRRLGAKEDFLEIQEH 251 (325)
T ss_pred HHHHHHHHHHhccCHHhcCCCCCCHHHHhcC
Confidence 3566899999999999999875 55544
No 159
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=1.8e-35 Score=327.21 Aligned_cols=257 Identities=22% Similarity=0.258 Sum_probs=201.5
Q ss_pred hccccceEEeeeceEEEEEEEec-CCceEEEEEeccc---CcccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEE
Q 002278 616 ENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQ---YPHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFY 691 (943)
Q Consensus 616 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 691 (943)
++|+..+.||+|+||+||+|+.+ +++.||+|++.+. .....+.+.+|+.+++.++||||+++++++.+++..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence 36888999999999999999976 5789999998642 1233456788999999999999999999999999999999
Q ss_pred EEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCC
Q 002278 692 DYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTA 771 (943)
Q Consensus 692 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~ 771 (943)
||+++|+|.+++.. ....+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++......
T Consensus 81 e~~~g~~L~~~l~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 155 (331)
T cd05597 81 DYYVGGDLLTLLSK--FEDRLPEDMARFYLAEMVLAIDSVHQL---GYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLAD 155 (331)
T ss_pred ecCCCCcHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEECCCCHHHEEECCCCCEEEEECCceeecCCC
Confidence 99999999999863 234689999999999999999999999 9999999999999999999999999999776544
Q ss_pred CCceeeeEecccceeCcccccc-----CCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCccc
Q 002278 772 MPHASTFVLGTIGYIDPEYAHT-----SRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEV 846 (943)
Q Consensus 772 ~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 846 (943)
.........||+.|+|||++.. ..++.++||||+||++|||++|+.||.................... ..+..
T Consensus 156 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~--~~~~~ 233 (331)
T cd05597 156 GTVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKEHFQ--FPPDV 233 (331)
T ss_pred CCccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcCCCccc--CCCcc
Confidence 3333334569999999999863 4578899999999999999999999987655444333322211111 11111
Q ss_pred ccCccCHHHHHHHHHHHHHccCCCC--CCCCCHHHHHHHHh
Q 002278 847 SVTCVDLSAVRKTFQLALLCTKRYP--SERPTMQEVARVLV 885 (943)
Q Consensus 847 ~~~~~~~~~~~~l~~l~~~cl~~dP--~~RPt~~el~~~L~ 885 (943)
. .....+.+++++|+..++ ..||++.++++|-+
T Consensus 234 ~------~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~hp~ 268 (331)
T cd05597 234 T------DVSEEAKDLIRRLICSPETRLGRNGLQDFKDHPF 268 (331)
T ss_pred C------CCCHHHHHHHHHHccCcccccCCCCHHHHhcCCC
Confidence 0 012345677777665433 34889999999854
No 160
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=3.4e-35 Score=312.04 Aligned_cols=246 Identities=26% Similarity=0.396 Sum_probs=199.3
Q ss_pred EEeeeceEEEEEEEecCCceEEEEEecccCc-ccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEEccCCChhh
Q 002278 623 IVGYGASSTVYKCALKNSRPIAVKKLYNQYP-HNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWD 701 (943)
Q Consensus 623 ~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~ 701 (943)
+||+|+||.||+|..++++.||+|.+..... .....+.+|+++++.++||||+++++++...+..++||||+++++|.+
T Consensus 2 ~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 81 (250)
T cd05085 2 LLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFLS 81 (250)
T ss_pred ccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHHH
Confidence 6899999999999988888999998865543 234568899999999999999999999999999999999999999999
Q ss_pred hccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCCceeeeEec
Q 002278 702 LLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLG 781 (943)
Q Consensus 702 ~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~~~g 781 (943)
++... ...+++..+..++.|++.||.|+|+. +++||||||+||+++.++.+|++|||++...............+
T Consensus 82 ~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~ 156 (250)
T cd05085 82 FLRKK--KDELKTKQLVKFALDAAAGMAYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQI 156 (250)
T ss_pred HHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccChheEEEcCCCeEEECCCccceeccccccccCCCCCC
Confidence 88632 34588999999999999999999998 99999999999999999999999999997654332222222234
Q ss_pred ccceeCccccccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCccHHHHHHHhccccccccccCcccccCccCHHHHHHHH
Q 002278 782 TIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAVRKTF 860 (943)
Q Consensus 782 t~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 860 (943)
+..|+|||+..+..++.++||||||+++||+++ |..||.............. ... ...... ....+.
T Consensus 157 ~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~-~~~--~~~~~~---------~~~~~~ 224 (250)
T cd05085 157 PIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEK-GYR--MSCPQK---------CPDDVY 224 (250)
T ss_pred cccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHc-CCC--CCCCCC---------CCHHHH
Confidence 678999999998889999999999999999998 9999976544332222211 110 011111 125678
Q ss_pred HHHHHccCCCCCCCCCHHHHHHHHh
Q 002278 861 QLALLCTKRYPSERPTMQEVARVLV 885 (943)
Q Consensus 861 ~l~~~cl~~dP~~RPt~~el~~~L~ 885 (943)
+++.+|+..+|++||++.++++.|.
T Consensus 225 ~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 225 KVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred HHHHHHcccCcccCCCHHHHHHHhc
Confidence 8999999999999999999998874
No 161
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=1.6e-35 Score=327.13 Aligned_cols=244 Identities=21% Similarity=0.287 Sum_probs=193.2
Q ss_pred eEEeeeceEEEEEEEec-CCceEEEEEecccC---cccHHHHHHHHHHHhcC-CCCCcceeeeEEecCCcceEEEEEccC
Q 002278 622 YIVGYGASSTVYKCALK-NSRPIAVKKLYNQY---PHNLREFETELETIGSI-RHRNIVSLHGYALSPYGNLLFYDYMVN 696 (943)
Q Consensus 622 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 696 (943)
+.||+|+||.||+|..+ +++.||+|++.... ....+.+.+|+.++.++ +||+|+++++++......++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 36999999999999976 46889999987542 23345678899998888 599999999999999999999999999
Q ss_pred CChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCCcee
Q 002278 697 GSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHAS 776 (943)
Q Consensus 697 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~~~~ 776 (943)
|+|.+++. ....+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++...... ...
T Consensus 81 ~~L~~~~~---~~~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~-~~~ 153 (327)
T cd05617 81 GDLMFHMQ---RQRKLPEEHARFYAAEICIALNFLHER---GIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPG-DTT 153 (327)
T ss_pred CcHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEeCCCCEEEeccccceeccCCC-Cce
Confidence 99998886 335699999999999999999999999 99999999999999999999999999997532221 222
Q ss_pred eeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCc------cHHHHHHHhccccccccccCcccccCc
Q 002278 777 TFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNES------NLHQLIMSKADDNTVMEAVDPEVSVTC 850 (943)
Q Consensus 777 ~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 850 (943)
....||+.|+|||++.+..++.++|||||||++|||++|+.||.... ........... .. ...+..+
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~-~~--~~~p~~~---- 226 (327)
T cd05617 154 STFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILE-KP--IRIPRFL---- 226 (327)
T ss_pred ecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHh-CC--CCCCCCC----
Confidence 34569999999999999999999999999999999999999996321 11111111111 10 0011111
Q ss_pred cCHHHHHHHHHHHHHccCCCCCCCCC------HHHHHHHH
Q 002278 851 VDLSAVRKTFQLALLCTKRYPSERPT------MQEVARVL 884 (943)
Q Consensus 851 ~~~~~~~~l~~l~~~cl~~dP~~RPt------~~el~~~L 884 (943)
...+.+++.+|+..||++|++ +.++.+|-
T Consensus 227 -----~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h~ 261 (327)
T cd05617 227 -----SVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSHT 261 (327)
T ss_pred -----CHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcCC
Confidence 135668999999999999998 45777664
No 162
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=2.2e-35 Score=319.69 Aligned_cols=252 Identities=20% Similarity=0.256 Sum_probs=200.5
Q ss_pred cccceEEeeeceEEEEEEEec-CCceEEEEEecccC---cccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEE
Q 002278 618 LSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQY---PHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDY 693 (943)
Q Consensus 618 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 693 (943)
|+..+.||+|+||+||+|.+. +++.||+|.+.... ......+.+|+++++.++|++|+++++++..++..+++|||
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence 566788999999999999976 57889999886432 12234577899999999999999999999999999999999
Q ss_pred ccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCC
Q 002278 694 MVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMP 773 (943)
Q Consensus 694 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~ 773 (943)
+++++|.+++... ....+++..+..++.|++.||+|||+. +|+||||||+||++++++.++|+|||++........
T Consensus 82 ~~~~~L~~~~~~~-~~~~~~~~~~~~~~~ql~~~l~~lH~~---~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~ 157 (285)
T cd05632 82 MNGGDLKFHIYNM-GNPGFEEERALFYAAEILCGLEDLHRE---NTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGES 157 (285)
T ss_pred ccCccHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEECCCCCEEEecCCcceecCCCCc
Confidence 9999999888632 234689999999999999999999999 999999999999999999999999999976543221
Q ss_pred ceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccccCccCH
Q 002278 774 HASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDL 853 (943)
Q Consensus 774 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 853 (943)
.....|+..|+|||++.+..++.++|+||+||++|||++|+.||........................+.+
T Consensus 158 --~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 228 (285)
T cd05632 158 --IRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETEEVYSAKF------- 228 (285)
T ss_pred --ccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhccccccCccC-------
Confidence 12345899999999999889999999999999999999999999865443222111111111111111111
Q ss_pred HHHHHHHHHHHHccCCCCCCCCC-----HHHHHHHH
Q 002278 854 SAVRKTFQLALLCTKRYPSERPT-----MQEVARVL 884 (943)
Q Consensus 854 ~~~~~l~~l~~~cl~~dP~~RPt-----~~el~~~L 884 (943)
...+.+++..|++.||++||+ +.+++++-
T Consensus 229 --~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~ 262 (285)
T cd05632 229 --SEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRHP 262 (285)
T ss_pred --CHHHHHHHHHHccCCHhHcCCCcccChHHHHcCh
Confidence 235678999999999999999 77877763
No 163
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=4.2e-35 Score=313.54 Aligned_cols=256 Identities=30% Similarity=0.418 Sum_probs=209.2
Q ss_pred HhhccccceEEeeeceEEEEEEEecCCceEEEEEecccCcccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEE
Q 002278 614 STENLSEKYIVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDY 693 (943)
Q Consensus 614 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 693 (943)
..++|++.+.||+|+||.||+|..++++.||+|.+... ....+++.+|+.++++++||||+++++++......+++|||
T Consensus 4 ~~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 82 (261)
T cd05034 4 PRESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPG-TMSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEY 82 (261)
T ss_pred chhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCC-ccCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEec
Confidence 35688899999999999999999888888999988643 33457889999999999999999999999998899999999
Q ss_pred ccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCC
Q 002278 694 MVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMP 773 (943)
Q Consensus 694 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~ 773 (943)
+++++|.+++... ....+++.++..++.+++.|++|||+. +++||||||+||++++++.+|++|||.++.......
T Consensus 83 ~~~~~L~~~i~~~-~~~~~~~~~~~~~~~~i~~al~~lh~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~ 158 (261)
T cd05034 83 MSKGSLLDFLKSG-EGKKLRLPQLVDMAAQIAEGMAYLESR---NYIHRDLAARNILVGENLVCKIADFGLARLIEDDEY 158 (261)
T ss_pred cCCCCHHHHHhcc-ccCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcchheEEEcCCCCEEECccccceeccchhh
Confidence 9999999999643 224689999999999999999999999 999999999999999999999999999987653322
Q ss_pred ceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCccHHHHHHHhccccccccccCcccccCccC
Q 002278 774 HASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVD 852 (943)
Q Consensus 774 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 852 (943)
.......++..|+|||.+.+..++.++||||+||++||++| |+.||.+............. .. ......
T Consensus 159 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~-~~--~~~~~~------- 228 (261)
T cd05034 159 TAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVERG-YR--MPRPPN------- 228 (261)
T ss_pred hhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-CC--CCCCCC-------
Confidence 22222335678999999998889999999999999999999 99999765543333222111 10 000111
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhh
Q 002278 853 LSAVRKTFQLALLCTKRYPSERPTMQEVARVLVS 886 (943)
Q Consensus 853 ~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~ 886 (943)
....+.+++.+|+..+|++||+++++.+.|+.
T Consensus 229 --~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 229 --CPEELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred --CCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 12467889999999999999999999998864
No 164
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=2.8e-35 Score=313.89 Aligned_cols=250 Identities=26% Similarity=0.344 Sum_probs=205.8
Q ss_pred ccccceEEeeeceEEEEEEEec-CCceEEEEEeccc--CcccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEE
Q 002278 617 NLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQ--YPHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDY 693 (943)
Q Consensus 617 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 693 (943)
+|+..+.||+|++|.||+|..+ +++.||+|.+... ......++.+|+++++.++||||+++++++.+.+..++||||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY 80 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence 4677889999999999999976 5788999988543 234566788999999999999999999999999999999999
Q ss_pred ccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCC
Q 002278 694 MVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMP 773 (943)
Q Consensus 694 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~ 773 (943)
+++++|.+++... ....+++..+..++.|++.|++|||+. +++||||||+||++++++.++|+|||+++.......
T Consensus 81 ~~~~~L~~~l~~~-~~~~~~~~~~~~i~~~l~~al~~lH~~---~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~ 156 (256)
T cd08529 81 AENGDLHKLLKMQ-RGRPLPEDQVWRFFIQILLGLAHLHSK---KILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTN 156 (256)
T ss_pred CCCCcHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEeCCCCEEEcccccceeccCccc
Confidence 9999999998743 235689999999999999999999998 999999999999999999999999999987654322
Q ss_pred ceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccccCccCH
Q 002278 774 HASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDL 853 (943)
Q Consensus 774 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 853 (943)
.. ....|++.|+|||+..+..++.++|+|||||++|||++|+.||................ .+.+..
T Consensus 157 ~~-~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~-------~~~~~~----- 223 (256)
T cd08529 157 FA-NTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIRGV-------FPPVSQ----- 223 (256)
T ss_pred hh-hccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCC-------CCCCcc-----
Confidence 22 23458899999999999999999999999999999999999998665433222221111 111111
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002278 854 SAVRKTFQLALLCTKRYPSERPTMQEVARV 883 (943)
Q Consensus 854 ~~~~~l~~l~~~cl~~dP~~RPt~~el~~~ 883 (943)
.....+.+++.+||+.+|++||++.+++++
T Consensus 224 ~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 224 MYSQQLAQLIDQCLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred ccCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence 122567899999999999999999999876
No 165
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=2.4e-35 Score=318.73 Aligned_cols=256 Identities=25% Similarity=0.380 Sum_probs=204.9
Q ss_pred hhccccceEEeeeceEEEEEEEec------CCceEEEEEecccCcccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcce
Q 002278 615 TENLSEKYIVGYGASSTVYKCALK------NSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYALSPYGNL 688 (943)
Q Consensus 615 ~~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 688 (943)
..+|...+.||+|+||.||+|... ++..+|+|.+..........+.+|+++++.++||||+++++++.+.+..+
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 83 (280)
T cd05092 4 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLL 83 (280)
T ss_pred hHhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceE
Confidence 356777889999999999999742 35678999887665566678999999999999999999999999999999
Q ss_pred EEEEEccCCChhhhccCCCC------------CccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCc
Q 002278 689 LFYDYMVNGSLWDLLHGPSK------------KVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFD 756 (943)
Q Consensus 689 lv~e~~~~g~L~~~l~~~~~------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~ 756 (943)
++|||+++|+|.+++..... ...+++.++..++.|++.|++|||+. +++||||||+||++++++.
T Consensus 84 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~nil~~~~~~ 160 (280)
T cd05092 84 MVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASL---HFVHRDLATRNCLVGQGLV 160 (280)
T ss_pred EEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHC---CeecccccHhhEEEcCCCC
Confidence 99999999999999864321 13588999999999999999999999 9999999999999999999
Q ss_pred eeecccccccccCCCCCc-eeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCccHHHHHHHhcc
Q 002278 757 AHLSDFGIARCIPTAMPH-ASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKAD 834 (943)
Q Consensus 757 ~kl~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~ 834 (943)
+||+|||+++........ ......+++.|+|||+..+..++.++|||||||++|||++ |++||...............
T Consensus 161 ~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~ 240 (280)
T cd05092 161 VKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIECITQG 240 (280)
T ss_pred EEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHHHHHHcC
Confidence 999999999765332211 1122235678999999999999999999999999999998 99999765543332222111
Q ss_pred ccccccccCcccccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 002278 835 DNTVMEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLV 885 (943)
Q Consensus 835 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~ 885 (943)
.. +..+. .....+.+++.+||+.||++||++.++.+.|+
T Consensus 241 ~~-------~~~~~-----~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~ 279 (280)
T cd05092 241 RE-------LERPR-----TCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQ 279 (280)
T ss_pred cc-------CCCCC-----CCCHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence 11 01110 11245679999999999999999999999875
No 166
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=2.6e-35 Score=331.31 Aligned_cols=263 Identities=24% Similarity=0.317 Sum_probs=207.4
Q ss_pred HHHhhccccceEEeeeceEEEEEEEec------CCceEEEEEecccCc-ccHHHHHHHHHHHhcCC-CCCcceeeeEEec
Q 002278 612 MRSTENLSEKYIVGYGASSTVYKCALK------NSRPIAVKKLYNQYP-HNLREFETELETIGSIR-HRNIVSLHGYALS 683 (943)
Q Consensus 612 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~ 683 (943)
....++|...+.||+|+||.||+|+++ .++.||+|++..... ...+.+.+|+++++++. |||||++++++..
T Consensus 33 ~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~ 112 (401)
T cd05107 33 EMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTK 112 (401)
T ss_pred eecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEcc
Confidence 345567888899999999999999864 246799999975432 23456889999999997 9999999999999
Q ss_pred CCcceEEEEEccCCChhhhccCCCC-------------------------------------------------------
Q 002278 684 PYGNLLFYDYMVNGSLWDLLHGPSK------------------------------------------------------- 708 (943)
Q Consensus 684 ~~~~~lv~e~~~~g~L~~~l~~~~~------------------------------------------------------- 708 (943)
.+..++||||+++|+|.++++....
T Consensus 113 ~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (401)
T cd05107 113 GGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPM 192 (401)
T ss_pred CCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccch
Confidence 9999999999999999999864211
Q ss_pred ----------------------------------------CccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCcc
Q 002278 709 ----------------------------------------KVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSN 748 (943)
Q Consensus 709 ----------------------------------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~N 748 (943)
...+++..+..++.|++.||+|||+. +++||||||+|
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrdlkp~N 269 (401)
T cd05107 193 QDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASK---NCVHRDLAARN 269 (401)
T ss_pred hcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC---CcCcccCCcce
Confidence 12367788899999999999999998 99999999999
Q ss_pred EEECCCCceeecccccccccCCCCC-ceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCccHH
Q 002278 749 ILIDENFDAHLSDFGIARCIPTAMP-HASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLH 826 (943)
Q Consensus 749 ill~~~~~~kl~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~p~~~~~~~~ 826 (943)
|++++++.+||+|||+++....... .......++..|+|||.+.+..++.++|||||||++|||++ |+.||.......
T Consensus 270 iLl~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~ 349 (401)
T cd05107 270 VLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNE 349 (401)
T ss_pred EEEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchH
Confidence 9999999999999999986533211 11122346789999999998889999999999999999998 899997654433
Q ss_pred HHHHHhccccccccccCcccccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcC
Q 002278 827 QLIMSKADDNTVMEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLVSLL 888 (943)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~~~ 888 (943)
........... +..+.. ....+.+++..||..+|++||+++++++.|+.+.
T Consensus 350 ~~~~~~~~~~~------~~~p~~-----~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~ 400 (401)
T cd05107 350 QFYNAIKRGYR------MAKPAH-----ASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL 400 (401)
T ss_pred HHHHHHHcCCC------CCCCCC-----CCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 32222221111 111111 1246788999999999999999999999998754
No 167
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=2.7e-35 Score=317.90 Aligned_cols=257 Identities=23% Similarity=0.353 Sum_probs=202.8
Q ss_pred HhhccccceEEeeeceEEEEEEEecC------CceEEEEEecccC-cccHHHHHHHHHHHhcCCCCCcceeeeEEecCCc
Q 002278 614 STENLSEKYIVGYGASSTVYKCALKN------SRPIAVKKLYNQY-PHNLREFETELETIGSIRHRNIVSLHGYALSPYG 686 (943)
Q Consensus 614 ~~~~~~~~~~lG~G~~g~Vy~~~~~~------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 686 (943)
.+++|...+.||+|+||.||+|.+.+ +..||+|.+.... ......+.+|+.+++.++|+||+++++++.+...
T Consensus 4 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 83 (277)
T cd05036 4 PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLP 83 (277)
T ss_pred CHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCC
Confidence 45678999999999999999999764 4678888875433 2334568899999999999999999999999989
Q ss_pred ceEEEEEccCCChhhhccCCCC----CccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCC---ceee
Q 002278 687 NLLFYDYMVNGSLWDLLHGPSK----KVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENF---DAHL 759 (943)
Q Consensus 687 ~~lv~e~~~~g~L~~~l~~~~~----~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~---~~kl 759 (943)
.++||||+++|+|.+++..... ...+++.++..++.||+.|++|||+. +++||||||+||+++.++ .+||
T Consensus 84 ~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~nil~~~~~~~~~~kl 160 (277)
T cd05036 84 RFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEEN---HFIHRDIAARNCLLTCKGPGRVAKI 160 (277)
T ss_pred cEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchheEEEeccCCCcceEe
Confidence 9999999999999999864321 23589999999999999999999999 999999999999998654 5999
Q ss_pred cccccccccCCCCCce-eeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCccHHHHHHHhccccc
Q 002278 760 SDFGIARCIPTAMPHA-STFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKADDNT 837 (943)
Q Consensus 760 ~DFGla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~ 837 (943)
+|||+++......... .....++..|+|||++.+..++.++|||||||++|||++ |+.||......... ........
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~-~~~~~~~~ 239 (277)
T cd05036 161 ADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVM-EFVTGGGR 239 (277)
T ss_pred ccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHH-HHHHcCCc
Confidence 9999998763322111 111223568999999998899999999999999999997 99999865543322 22111111
Q ss_pred cccccCcccccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 002278 838 VMEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLV 885 (943)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~ 885 (943)
. ...+. ....+.+++.+|++.+|++||++.+++++|.
T Consensus 240 ~--~~~~~---------~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 240 L--DPPKG---------CPGPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred C--CCCCC---------CCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 1 01111 1246778999999999999999999999985
No 168
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=1.4e-35 Score=349.85 Aligned_cols=261 Identities=21% Similarity=0.221 Sum_probs=204.2
Q ss_pred hccccceEEeeeceEEEEEEEec-CCceEEEEEecccCc---ccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEE
Q 002278 616 ENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQYP---HNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFY 691 (943)
Q Consensus 616 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 691 (943)
++|+..+.||+|+||.||+|.+. .++.||+|++..... ...+++.+|+++++.++||||+++++++.+++..+++|
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM 81 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence 57889999999999999999976 478999999865322 23457889999999999999999999999999999999
Q ss_pred EEccCCChhhhccCCC--------CCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccc
Q 002278 692 DYMVNGSLWDLLHGPS--------KKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFG 763 (943)
Q Consensus 692 e~~~~g~L~~~l~~~~--------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFG 763 (943)
||++||+|.+++.... .....++.+++.++.|+++||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~---GIIHRDLKPeNILLd~dg~vKLiDFG 158 (932)
T PRK13184 82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSK---GVLHRDLKPDNILLGLFGEVVILDWG 158 (932)
T ss_pred EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHC---CccccCCchheEEEcCCCCEEEEecC
Confidence 9999999999885321 123456778899999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCC-----------------ceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHH
Q 002278 764 IARCIPTAMP-----------------HASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLH 826 (943)
Q Consensus 764 la~~~~~~~~-----------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~ 826 (943)
+++....... .......||+.|+|||++.+..++.++||||+||++|||+||+.||.......
T Consensus 159 LAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~k 238 (932)
T PRK13184 159 AAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRK 238 (932)
T ss_pred cceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhh
Confidence 9986621110 01112459999999999999999999999999999999999999997644322
Q ss_pred HHHHHhccccccccccCcccccCccCHHHHHHHHHHHHHccCCCCCCCC-CHHHHHHHHhhcCC
Q 002278 827 QLIMSKADDNTVMEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERP-TMQEVARVLVSLLP 889 (943)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-t~~el~~~L~~~~~ 889 (943)
......... +....+ ....+..+.+++.+|++.||++|| +++++.+.++....
T Consensus 239 i~~~~~i~~---P~~~~p-------~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq 292 (932)
T PRK13184 239 ISYRDVILS---PIEVAP-------YREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQ 292 (932)
T ss_pred hhhhhhccC---hhhccc-------cccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 111110000 000000 001224567899999999999996 66777777776654
No 169
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=4.2e-35 Score=312.71 Aligned_cols=246 Identities=24% Similarity=0.329 Sum_probs=196.6
Q ss_pred EEeeeceEEEEEEEec---CCceEEEEEecccC--cccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEEccCC
Q 002278 623 IVGYGASSTVYKCALK---NSRPIAVKKLYNQY--PHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNG 697 (943)
Q Consensus 623 ~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 697 (943)
.||+|+||.||+|.++ ++..+|+|++.... ....+++.+|+.+++.++||||+++++++. .+..++||||+++|
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~ 80 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELG 80 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCC
Confidence 4899999999999753 46789999886443 223567889999999999999999999885 45678999999999
Q ss_pred ChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCCcee-
Q 002278 698 SLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHAS- 776 (943)
Q Consensus 698 ~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~~~~- 776 (943)
+|.+++. ....+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+++.+........
T Consensus 81 ~L~~~l~---~~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~ 154 (257)
T cd05116 81 PLNKFLQ---KNKHVTEKNITELVHQVSMGMKYLEET---NFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKA 154 (257)
T ss_pred cHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchhhEEEcCCCeEEECCCccccccCCCCCeeee
Confidence 9999986 334689999999999999999999999 999999999999999999999999999987654332211
Q ss_pred -eeEecccceeCccccccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCccHHHHHHHhccccccccccCcccccCccCHH
Q 002278 777 -TFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLS 854 (943)
Q Consensus 777 -~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 854 (943)
....++..|+|||.+....++.++|||||||++|||++ |+.||............. .... +..+. .
T Consensus 155 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~-~~~~------~~~~~-----~ 222 (257)
T cd05116 155 KTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIE-SGER------MECPQ-----R 222 (257)
T ss_pred cCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH-CCCC------CCCCC-----C
Confidence 11224578999999988889999999999999999998 999998655433322222 1111 11111 1
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhc
Q 002278 855 AVRKTFQLALLCTKRYPSERPTMQEVARVLVSL 887 (943)
Q Consensus 855 ~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~~ 887 (943)
....+.+++..||+.||++||++++|.+.|+.+
T Consensus 223 ~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~~ 255 (257)
T cd05116 223 CPPEMYDLMKLCWTYGVDERPGFAVVELRLRNY 255 (257)
T ss_pred CCHHHHHHHHHHhccCchhCcCHHHHHHHHhcc
Confidence 124677999999999999999999999998764
No 170
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=2.1e-35 Score=319.91 Aligned_cols=256 Identities=23% Similarity=0.348 Sum_probs=202.5
Q ss_pred hccccceEEeeeceEEEEEEEecC------CceEEEEEecccCc-ccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcce
Q 002278 616 ENLSEKYIVGYGASSTVYKCALKN------SRPIAVKKLYNQYP-HNLREFETELETIGSIRHRNIVSLHGYALSPYGNL 688 (943)
Q Consensus 616 ~~~~~~~~lG~G~~g~Vy~~~~~~------~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 688 (943)
..|...+.||+|+||.||+|...+ +..||+|++..... ...+.+.+|+.+++.++||||+++++++......+
T Consensus 5 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~ 84 (283)
T cd05091 5 STVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLS 84 (283)
T ss_pred HHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceE
Confidence 346677789999999999998643 46799999875432 23456889999999999999999999999999999
Q ss_pred EEEEEccCCChhhhccCC-------------CCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCC
Q 002278 689 LFYDYMVNGSLWDLLHGP-------------SKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENF 755 (943)
Q Consensus 689 lv~e~~~~g~L~~~l~~~-------------~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~ 755 (943)
+++||+++++|.+++... .....+++..+..++.|++.||+|+|++ +|+||||||+||++++++
T Consensus 85 ~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~---gi~H~dlkp~Nil~~~~~ 161 (283)
T cd05091 85 MIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSH---HVVHKDLATRNVLVFDKL 161 (283)
T ss_pred EEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHc---CccccccchhheEecCCC
Confidence 999999999999987421 1123588899999999999999999999 999999999999999999
Q ss_pred ceeecccccccccCCCCC-ceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCccHHHHHHHhc
Q 002278 756 DAHLSDFGIARCIPTAMP-HASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKA 833 (943)
Q Consensus 756 ~~kl~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~ 833 (943)
.+||+|||+++....... .......+++.|+|||.+.+..++.++|||||||++|||++ |..||.+............
T Consensus 162 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~i~~ 241 (283)
T cd05091 162 NVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVIEMIRN 241 (283)
T ss_pred ceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHc
Confidence 999999999886543321 11122345789999999988889999999999999999998 8889876554332222222
Q ss_pred cccccccccCcccccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhh
Q 002278 834 DDNTVMEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLVS 886 (943)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~ 886 (943)
.... .+.. .....+.+++..||+.+|++||+++++++.|+.
T Consensus 242 ~~~~-------~~~~-----~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 242 RQVL-------PCPD-----DCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred CCcC-------CCCC-----CCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 1111 0111 122457789999999999999999999999864
No 171
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=4.6e-35 Score=315.29 Aligned_cols=254 Identities=22% Similarity=0.344 Sum_probs=198.1
Q ss_pred ccceEEeeeceEEEEEEEecCCc---eEEEEEecccC--cccHHHHHHHHHHHhcCCCCCcceeeeEEecC------Ccc
Q 002278 619 SEKYIVGYGASSTVYKCALKNSR---PIAVKKLYNQY--PHNLREFETELETIGSIRHRNIVSLHGYALSP------YGN 687 (943)
Q Consensus 619 ~~~~~lG~G~~g~Vy~~~~~~~~---~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~~~ 687 (943)
.+.+.||+|+||.||+|.+.... .||+|.+.... ....+.+.+|+++++.++||||+++++++... ...
T Consensus 2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 81 (272)
T cd05075 2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSP 81 (272)
T ss_pred ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCc
Confidence 45678999999999999976432 58999876432 33456788999999999999999999987532 246
Q ss_pred eEEEEEccCCChhhhccCC---CCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeeccccc
Q 002278 688 LLFYDYMVNGSLWDLLHGP---SKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGI 764 (943)
Q Consensus 688 ~lv~e~~~~g~L~~~l~~~---~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGl 764 (943)
+++|||+++|+|.+++... .....+++..+..++.|++.||+|||++ +|+||||||+||++++++.+||+|||+
T Consensus 82 ~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~ 158 (272)
T cd05075 82 VVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSK---SFIHRDLAARNCMLNENMNVCVADFGL 158 (272)
T ss_pred EEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhheEEcCCCCEEECCCCc
Confidence 8999999999999887321 1234589999999999999999999998 999999999999999999999999999
Q ss_pred ccccCCCCCce-eeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCccHHHHHHHhcccccccccc
Q 002278 765 ARCIPTAMPHA-STFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKADDNTVMEAV 842 (943)
Q Consensus 765 a~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~ 842 (943)
++.+....... .....+++.|+|||...+..++.++|||||||++|||++ |+.||............... ... . .
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~-~~~-~-~ 235 (272)
T cd05075 159 SKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQG-NRL-K-Q 235 (272)
T ss_pred ccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC-CCC-C-C
Confidence 98764432211 122336778999999999999999999999999999999 89999765543322222211 110 0 1
Q ss_pred CcccccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhc
Q 002278 843 DPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLVSL 887 (943)
Q Consensus 843 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~~ 887 (943)
.+. ....+.+++.+||+.+|++|||+.++++.|+.+
T Consensus 236 ~~~---------~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 236 PPD---------CLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred CCC---------CCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 111 124577999999999999999999999998764
No 172
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=2.5e-35 Score=319.73 Aligned_cols=262 Identities=24% Similarity=0.270 Sum_probs=201.9
Q ss_pred ccccceEEeeeceEEEEEEEec-CCceEEEEEecccC--cccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEE
Q 002278 617 NLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQY--PHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDY 693 (943)
Q Consensus 617 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 693 (943)
+|+..+.||+|++|.||+|+.+ ++..||+|++.... ......+.+|+.+++.++||||+++++++.++...++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF 80 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence 4778889999999999999976 57899999886432 22346788999999999999999999999999999999999
Q ss_pred ccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCC
Q 002278 694 MVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMP 773 (943)
Q Consensus 694 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~ 773 (943)
++ ++|.+++........+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++........
T Consensus 81 ~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 156 (285)
T cd07861 81 LS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSR---RVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVR 156 (285)
T ss_pred CC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEEcCCCcEEECcccceeecCCCcc
Confidence 97 68888886544446789999999999999999999999 999999999999999999999999999976543221
Q ss_pred ceeeeEecccceeCccccccC-CCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcc-------
Q 002278 774 HASTFVLGTIGYIDPEYAHTS-RLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPE------- 845 (943)
Q Consensus 774 ~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 845 (943)
......+++.|+|||++.+. .++.++|||||||++|||+||+.||.+..................+..++.
T Consensus 157 -~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (285)
T cd07861 157 -VYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDY 235 (285)
T ss_pred -cccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHH
Confidence 11223468899999988654 578999999999999999999999987655443333221111111110000
Q ss_pred ---cccCc------cCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002278 846 ---VSVTC------VDLSAVRKTFQLALLCTKRYPSERPTMQEVARV 883 (943)
Q Consensus 846 ---~~~~~------~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~ 883 (943)
+.... .......++.+++.+|+..||++|||+.+++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~ 282 (285)
T cd07861 236 KNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNH 282 (285)
T ss_pred HhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcC
Confidence 00000 000012456789999999999999999999876
No 173
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=3.8e-35 Score=312.12 Aligned_cols=246 Identities=24% Similarity=0.365 Sum_probs=196.4
Q ss_pred EEeeeceEEEEEEEec-CCceEEEEEecccC-cccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEEccCCChh
Q 002278 623 IVGYGASSTVYKCALK-NSRPIAVKKLYNQY-PHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLW 700 (943)
Q Consensus 623 ~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~ 700 (943)
.||+|+||.||+|.++ +++.||+|.+.... ......+.+|+++++.++||||+++++++......++||||+++++|.
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 81 (252)
T cd05084 2 RIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFL 81 (252)
T ss_pred ccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcHH
Confidence 5899999999999976 67889999876443 234567899999999999999999999999999999999999999999
Q ss_pred hhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCCcee-eeE
Q 002278 701 DLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHAS-TFV 779 (943)
Q Consensus 701 ~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~~~~-~~~ 779 (943)
+++.. ....+++.+++.++.|++.||+|||+. +++||||||+||+++.++.+|++|||++........... ...
T Consensus 82 ~~~~~--~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~ 156 (252)
T cd05084 82 TFLRT--EGPRLKVKELIQMVENAAAGMEYLESK---HCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMK 156 (252)
T ss_pred HHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEEcCCCcEEECccccCcccccccccccCCCC
Confidence 99863 234589999999999999999999999 999999999999999999999999999976543211110 111
Q ss_pred ecccceeCccccccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCccHHHHHHHhccccccccccCcccccCccCHHHHHH
Q 002278 780 LGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAVRK 858 (943)
Q Consensus 780 ~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 858 (943)
.++..|+|||.+.+..++.++|||||||++|||++ |..||............... . .+..+. .....
T Consensus 157 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~~-~------~~~~~~-----~~~~~ 224 (252)
T cd05084 157 QIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQG-V------RLPCPE-----LCPDA 224 (252)
T ss_pred CCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHHcC-C------CCCCcc-----cCCHH
Confidence 23457999999999899999999999999999998 88998755433222211111 0 011110 11246
Q ss_pred HHHHHHHccCCCCCCCCCHHHHHHHHh
Q 002278 859 TFQLALLCTKRYPSERPTMQEVARVLV 885 (943)
Q Consensus 859 l~~l~~~cl~~dP~~RPt~~el~~~L~ 885 (943)
+.+++.+|++.+|++|||+.++.+.|.
T Consensus 225 ~~~li~~~l~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 225 VYRLMERCWEYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred HHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence 788999999999999999999998875
No 174
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=2.9e-35 Score=318.33 Aligned_cols=260 Identities=20% Similarity=0.315 Sum_probs=207.7
Q ss_pred HhhccccceEEeeeceEEEEEEEecC-----CceEEEEEecccC-cccHHHHHHHHHHHhcCCCCCcceeeeEEec-CCc
Q 002278 614 STENLSEKYIVGYGASSTVYKCALKN-----SRPIAVKKLYNQY-PHNLREFETELETIGSIRHRNIVSLHGYALS-PYG 686 (943)
Q Consensus 614 ~~~~~~~~~~lG~G~~g~Vy~~~~~~-----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~ 686 (943)
..++|+..+.||+|+||.||+|.+.. +..||+|++.... ....+.+.+|+.+++.++||||+++++++.. +..
T Consensus 4 ~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~ 83 (280)
T cd05043 4 SRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEP 83 (280)
T ss_pred chhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence 45788899999999999999999875 6788999886443 3345668899999999999999999998776 467
Q ss_pred ceEEEEEccCCChhhhccCCCCC-----ccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecc
Q 002278 687 NLLFYDYMVNGSLWDLLHGPSKK-----VKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSD 761 (943)
Q Consensus 687 ~~lv~e~~~~g~L~~~l~~~~~~-----~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~D 761 (943)
.++++||+++|+|.+++...... ..+++.++..++.|++.||+|||+. +++||||||+||++++++.+||+|
T Consensus 84 ~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kl~d 160 (280)
T cd05043 84 PFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKR---GVIHKDIAARNCVIDEELQVKITD 160 (280)
T ss_pred CEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCHhhEEEcCCCcEEECC
Confidence 89999999999999998643222 4689999999999999999999998 999999999999999999999999
Q ss_pred cccccccCCCCCce-eeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCccHHHHHHHhccccccc
Q 002278 762 FGIARCIPTAMPHA-STFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKADDNTVM 839 (943)
Q Consensus 762 FGla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~ 839 (943)
||+++.+....... .....++..|+|||++.+..++.++|||||||++||+++ |+.||....... +...........
T Consensus 161 ~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~-~~~~~~~~~~~~ 239 (280)
T cd05043 161 NALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFE-MAAYLKDGYRLA 239 (280)
T ss_pred CCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHH-HHHHHHcCCCCC
Confidence 99998664332211 112235678999999998889999999999999999999 999998654433 222222111111
Q ss_pred cccCcccccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcC
Q 002278 840 EAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLVSLL 888 (943)
Q Consensus 840 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~~~ 888 (943)
... .....+.+++.+||..||++|||+.++++.|..+.
T Consensus 240 ------~~~-----~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~ 277 (280)
T cd05043 240 ------QPI-----NCPDELFAVMACCWALDPEERPSFSQLVQCLTDFH 277 (280)
T ss_pred ------CCC-----cCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence 110 11246789999999999999999999999998764
No 175
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=5.1e-35 Score=315.12 Aligned_cols=255 Identities=24% Similarity=0.372 Sum_probs=201.2
Q ss_pred cccceEEeeeceEEEEEEEecC----CceEEEEEecccC--cccHHHHHHHHHHHhcCCCCCcceeeeEEecCCc-----
Q 002278 618 LSEKYIVGYGASSTVYKCALKN----SRPIAVKKLYNQY--PHNLREFETELETIGSIRHRNIVSLHGYALSPYG----- 686 (943)
Q Consensus 618 ~~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~----- 686 (943)
|...+.||+|+||.||+|.... +..||+|++.... ......+.+|++.++.++||||+++++++.....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 4567889999999999998653 3679999986432 2334578899999999999999999999876554
Q ss_pred -ceEEEEEccCCChhhhccCCC---CCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeeccc
Q 002278 687 -NLLFYDYMVNGSLWDLLHGPS---KKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDF 762 (943)
Q Consensus 687 -~~lv~e~~~~g~L~~~l~~~~---~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DF 762 (943)
.+++|||+++|+|.+++.... ....+++.++..++.|++.||+|||+. +++||||||+||++++++.+||+||
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~df 157 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNR---NFIHRDLAARNCMLREDMTVCVADF 157 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchheEEECCCCeEEECCc
Confidence 689999999999999885321 234689999999999999999999998 9999999999999999999999999
Q ss_pred ccccccCCCCCc-eeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCccHHHHHHHhcccccccc
Q 002278 763 GIARCIPTAMPH-ASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKADDNTVME 840 (943)
Q Consensus 763 Gla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~ 840 (943)
|+++.+...... ......++..|+|||+..+..++.++|||||||++|||++ |..||.+....... ........
T Consensus 158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~-~~~~~~~~--- 233 (273)
T cd05035 158 GLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIY-DYLRHGNR--- 233 (273)
T ss_pred cceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHH-HHHHcCCC---
Confidence 999876433221 1112235678999999988899999999999999999999 89999765543322 22111111
Q ss_pred ccCcccccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhc
Q 002278 841 AVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLVSL 887 (943)
Q Consensus 841 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~~ 887 (943)
+..+. .....+.+++.+||+.||++||++.+++++|..+
T Consensus 234 ---~~~~~-----~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 234 ---LKQPE-----DCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred ---CCCCc-----CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 11111 1224678999999999999999999999999764
No 176
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=3.6e-35 Score=319.67 Aligned_cols=254 Identities=22% Similarity=0.327 Sum_probs=209.4
Q ss_pred hhccccceEEeeeceEEEEEEEec-CCceEEEEEecccCcccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEE
Q 002278 615 TENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDY 693 (943)
Q Consensus 615 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 693 (943)
..+|+..+.||.|+||.||+|... +++.||+|.+........+.+.+|+.+++.++||||+++++++...+..++|+||
T Consensus 18 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 97 (296)
T cd06655 18 KKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEY 97 (296)
T ss_pred cceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEe
Confidence 456889999999999999999864 6889999998765555567888999999999999999999999999999999999
Q ss_pred ccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCC
Q 002278 694 MVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMP 773 (943)
Q Consensus 694 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~ 773 (943)
+++++|.+++. ...+++.++..++.|++.|++|||+. +++||||||+||+++.++.+||+|||++........
T Consensus 98 ~~~~~L~~~~~----~~~l~~~~~~~i~~~l~~al~~LH~~---~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~ 170 (296)
T cd06655 98 LAGGSLTDVVT----ETCMDEAQIAAVCRECLQALEFLHAN---QVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQS 170 (296)
T ss_pred cCCCcHHHHHH----hcCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccchhcccccc
Confidence 99999999885 23589999999999999999999999 999999999999999999999999999886543322
Q ss_pred ceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccccCccCH
Q 002278 774 HASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDL 853 (943)
Q Consensus 774 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 853 (943)
. .....|+..|+|||.+.+..++.++|||||||++|+|++|+.||..................... ...
T Consensus 171 ~-~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~-~~~--------- 239 (296)
T cd06655 171 K-RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQ-NPE--------- 239 (296)
T ss_pred c-CCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCcccC-Ccc---------
Confidence 1 22235889999999999888999999999999999999999999877654443322221111100 001
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhh
Q 002278 854 SAVRKTFQLALLCTKRYPSERPTMQEVARVLVS 886 (943)
Q Consensus 854 ~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~ 886 (943)
.....+.+++.+||..||++||++.+++.+-+-
T Consensus 240 ~~~~~~~~li~~~l~~dp~~Rpt~~~il~~~~~ 272 (296)
T cd06655 240 KLSPIFRDFLNRCLEMDVEKRGSAKELLQHPFL 272 (296)
T ss_pred cCCHHHHHHHHHHhhcChhhCCCHHHHhhChHh
Confidence 112456789999999999999999999987654
No 177
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=4.8e-35 Score=312.13 Aligned_cols=251 Identities=27% Similarity=0.424 Sum_probs=203.5
Q ss_pred hccccceEEeeeceEEEEEEEecCCceEEEEEecccCcccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEEcc
Q 002278 616 ENLSEKYIVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMV 695 (943)
Q Consensus 616 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 695 (943)
.+|+..+.||+|+||.||+|.+..++.+|+|.+... ......+.+|++++++++||+++++++++......++||||++
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~ 82 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREG-AMSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFME 82 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCC-CCCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCC
Confidence 467788899999999999999877888999988643 3345678999999999999999999999999999999999999
Q ss_pred CCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCCce
Q 002278 696 NGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHA 775 (943)
Q Consensus 696 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~~~ 775 (943)
+++|.+++.. ....++++.+..++.|++.|++|||+. +++||||||+||+++.++.++|+|||.++.........
T Consensus 83 ~~~L~~~~~~--~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~ 157 (256)
T cd05112 83 HGCLSDYLRA--QRGKFSQETLLGMCLDVCEGMAYLESS---NVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTS 157 (256)
T ss_pred CCcHHHHHHh--CccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccccceEEEcCCCeEEECCCcceeecccCcccc
Confidence 9999999863 234588999999999999999999999 99999999999999999999999999997654332221
Q ss_pred eeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCccHHHHHHHhccccccccccCcccccCccCHH
Q 002278 776 STFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLS 854 (943)
Q Consensus 776 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 854 (943)
.....++.+|+|||+..+..++.++||||+|+++|||++ |+.||.............. ... ...+..
T Consensus 158 ~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~-~~~---~~~~~~-------- 225 (256)
T cd05112 158 STGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINA-GFR---LYKPRL-------- 225 (256)
T ss_pred cCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHhC-CCC---CCCCCC--------
Confidence 222235678999999998889999999999999999998 9999976543322222111 110 011111
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 002278 855 AVRKTFQLALLCTKRYPSERPTMQEVARVL 884 (943)
Q Consensus 855 ~~~~l~~l~~~cl~~dP~~RPt~~el~~~L 884 (943)
....+.+++.+||+.+|++||++.++++.+
T Consensus 226 ~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l 255 (256)
T cd05112 226 ASQSVYELMQHCWKERPEDRPSFSLLLHQL 255 (256)
T ss_pred CCHHHHHHHHHHcccChhhCCCHHHHHHhh
Confidence 125678999999999999999999999876
No 178
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-36 Score=327.33 Aligned_cols=251 Identities=21% Similarity=0.343 Sum_probs=207.0
Q ss_pred ccccceEEeeeceEEEEEEEecC--C--ceEEEEEecccCcc-cHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEE
Q 002278 617 NLSEKYIVGYGASSTVYKCALKN--S--RPIAVKKLYNQYPH-NLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFY 691 (943)
Q Consensus 617 ~~~~~~~lG~G~~g~Vy~~~~~~--~--~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 691 (943)
+....+.||+|.||.|++|.|+. | ..||||.+...... ...+|.+|+.+|.+|+|||++++||+..+ ....+|+
T Consensus 111 ~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~ 189 (1039)
T KOG0199|consen 111 QIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVF 189 (1039)
T ss_pred HHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHh
Confidence 34455679999999999999873 3 45799999765533 56789999999999999999999999987 6789999
Q ss_pred EEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCC
Q 002278 692 DYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTA 771 (943)
Q Consensus 692 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~ 771 (943)
|.++.|+|.+.|+. .....+-......++.|||.|++||.++ ++|||||.++|+++.....|||+|||+.+-+...
T Consensus 190 ELaplGSLldrLrk-a~~~~llv~~Lcdya~QiA~aM~YLesk---rlvHRDLAARNlllasprtVKI~DFGLmRaLg~n 265 (1039)
T KOG0199|consen 190 ELAPLGSLLDRLRK-AKKAILLVSRLCDYAMQIAKAMQYLESK---RLVHRDLAARNLLLASPRTVKICDFGLMRALGEN 265 (1039)
T ss_pred hhcccchHHHHHhh-ccccceeHHHHHHHHHHHHHHHHHHhhh---hhhhhhhhhhhheecccceeeeecccceeccCCC
Confidence 99999999999986 4566788899999999999999999999 9999999999999999999999999999988655
Q ss_pred CCceee--eEecccceeCccccccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCccHHHHHHHhccccccccccCccccc
Q 002278 772 MPHAST--FVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSV 848 (943)
Q Consensus 772 ~~~~~~--~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 848 (943)
..+... ...-...|+|||.+....++.++|||+|||++|||+| |+.||-+......+..+. ....+.. |
T Consensus 266 ed~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~iD-~~erLpR---P---- 337 (1039)
T KOG0199|consen 266 EDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNID-AGERLPR---P---- 337 (1039)
T ss_pred CcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHhcc-ccccCCC---C----
Confidence 433211 1223568999999999999999999999999999999 999998877655443332 1111111 1
Q ss_pred CccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 002278 849 TCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVL 884 (943)
Q Consensus 849 ~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L 884 (943)
..+.+.++++++.||...|++|||+.++.+.+
T Consensus 338 ----k~csedIY~imk~cWah~paDRptFsair~~~ 369 (1039)
T KOG0199|consen 338 ----KYCSEDIYQIMKNCWAHNPADRPTFSAIREDL 369 (1039)
T ss_pred ----CCChHHHHHHHHHhccCCccccccHHHHHHhH
Confidence 12357899999999999999999999998554
No 179
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=2.2e-35 Score=316.93 Aligned_cols=254 Identities=22% Similarity=0.328 Sum_probs=203.0
Q ss_pred hhccccceEEeeeceEEEEEEEec-CCceEEEEEecccCcccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEE
Q 002278 615 TENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDY 693 (943)
Q Consensus 615 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 693 (943)
.++|+..+.||+|+||.||+|... +++.||+|.+..........+.+|+.+++.++||||+++++++...+..++||||
T Consensus 8 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~ 87 (267)
T cd06645 8 QEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEF 87 (267)
T ss_pred HHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEec
Confidence 357788888999999999999875 5788999988655444456688899999999999999999999999999999999
Q ss_pred ccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCC
Q 002278 694 MVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMP 773 (943)
Q Consensus 694 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~ 773 (943)
+++++|.+++. ..+.+++.++..++.|++.|++|||+. +++|+||||+||+++.++.++|+|||++........
T Consensus 88 ~~~~~L~~~~~---~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~ 161 (267)
T cd06645 88 CGGGSLQDIYH---VTGPLSESQIAYVSRETLQGLYYLHSK---GKMHRDIKGANILLTDNGHVKLADFGVSAQITATIA 161 (267)
T ss_pred cCCCcHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECcceeeeEccCccc
Confidence 99999999986 345689999999999999999999999 999999999999999999999999999976543221
Q ss_pred ceeeeEecccceeCccccc---cCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccccCc
Q 002278 774 HASTFVLGTIGYIDPEYAH---TSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTC 850 (943)
Q Consensus 774 ~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 850 (943)
......|+..|+|||++. ...++.++||||+||++|||++|+.||.................. ........
T Consensus 162 -~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~---- 235 (267)
T cd06645 162 -KRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKSNFQ-PPKLKDKM---- 235 (267)
T ss_pred -ccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhccCCC-CCcccccC----
Confidence 223346899999999874 456889999999999999999999999755443332222111111 01000000
Q ss_pred cCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002278 851 VDLSAVRKTFQLALLCTKRYPSERPTMQEVARV 883 (943)
Q Consensus 851 ~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~ 883 (943)
.....+.+++.+|++.+|++||++.+++++
T Consensus 236 ---~~~~~~~~li~~~l~~~P~~R~~~~~ll~~ 265 (267)
T cd06645 236 ---KWSNSFHHFVKMALTKNPKKRPTAEKLLQH 265 (267)
T ss_pred ---CCCHHHHHHHHHHccCCchhCcCHHHHhcC
Confidence 112356789999999999999999999876
No 180
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=2.6e-35 Score=348.73 Aligned_cols=259 Identities=20% Similarity=0.277 Sum_probs=203.3
Q ss_pred HHhhccccceEEeeeceEEEEEEEecC-CceEEEEEecccC--cccHHHHHHHHHHHhcCCCCCcceeeeEEecC--Ccc
Q 002278 613 RSTENLSEKYIVGYGASSTVYKCALKN-SRPIAVKKLYNQY--PHNLREFETELETIGSIRHRNIVSLHGYALSP--YGN 687 (943)
Q Consensus 613 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~ 687 (943)
...++|.+.+.||+|+||+||+|.+.. +..||+|.+.... ......+..|+.+++.++|||||+++++|... ...
T Consensus 10 ~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~l 89 (1021)
T PTZ00266 10 SRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKL 89 (1021)
T ss_pred cccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEE
Confidence 345789999999999999999999764 5678888875432 23456788999999999999999999988653 457
Q ss_pred eEEEEEccCCChhhhccCCC-CCccCCHHHHHHHHHHHHHHHHHhhhCCC----CCeEecCCCCccEEECC---------
Q 002278 688 LLFYDYMVNGSLWDLLHGPS-KKVKLDWETRLKIAVGAAQGLAYLHHDCN----PRIIHRDVKSSNILIDE--------- 753 (943)
Q Consensus 688 ~lv~e~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~----~~ivH~Dlkp~Nill~~--------- 753 (943)
++||||+++|+|.+++.... ....+++..++.|+.||+.||+|||+... .+||||||||+|||++.
T Consensus 90 yIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~ 169 (1021)
T PTZ00266 90 YILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKIT 169 (1021)
T ss_pred EEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcccccccc
Confidence 89999999999999986321 23569999999999999999999998521 25999999999999964
Q ss_pred --------CCceeecccccccccCCCCCceeeeEecccceeCcccccc--CCCCCcchhhhHHHHHHHHHhCCCCCCCCc
Q 002278 754 --------NFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHT--SRLNEKSDVYSFGIVLLEILTGKKAVDNES 823 (943)
Q Consensus 754 --------~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlGvil~elltG~~p~~~~~ 823 (943)
.+.+||+|||+++.+.... ......||+.|+|||++.+ ..++.++|||||||++|||+||+.||....
T Consensus 170 ~~~~n~ng~~iVKLsDFGlAr~l~~~s--~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~ 247 (1021)
T PTZ00266 170 AQANNLNGRPIAKIGDFGLSKNIGIES--MAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKAN 247 (1021)
T ss_pred ccccccCCCCceEEccCCccccccccc--cccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCC
Confidence 2358999999998664332 1223469999999999864 458899999999999999999999998776
Q ss_pred cHHHHHHHhccccccccccCcccccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 002278 824 NLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLV 885 (943)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~ 885 (943)
....+......... ++.. .....+.+++..||+.+|.+||++.+++.+-+
T Consensus 248 ~~~qli~~lk~~p~--------lpi~----~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ 297 (1021)
T PTZ00266 248 NFSQLISELKRGPD--------LPIK----GKSKELNILIKNLLNLSAKERPSALQCLGYQI 297 (1021)
T ss_pred cHHHHHHHHhcCCC--------CCcC----CCCHHHHHHHHHHhcCChhHCcCHHHHhccHH
Confidence 66655544332211 1100 11246778999999999999999999996543
No 181
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=2e-35 Score=331.70 Aligned_cols=261 Identities=22% Similarity=0.254 Sum_probs=202.6
Q ss_pred HhhccccceEEeeeceEEEEEEEec-CCceEEEEEecccC--cccHHHHHHHHHHHhcCCCCCcceeeeEEecCC-----
Q 002278 614 STENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQY--PHNLREFETELETIGSIRHRNIVSLHGYALSPY----- 685 (943)
Q Consensus 614 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----- 685 (943)
..++|...+.||+|+||.||+|... .++.||||++.... ......+.+|+.+++.++||||+++++++....
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~ 101 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 101 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence 4578999999999999999999976 57889999986532 334467788999999999999999999876432
Q ss_pred -cceEEEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeeccccc
Q 002278 686 -GNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGI 764 (943)
Q Consensus 686 -~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGl 764 (943)
..++||||+++ ++.+.+. ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 102 ~~~~lv~e~~~~-~l~~~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~ 172 (364)
T cd07875 102 QDVYIVMELMDA-NLCQVIQ-----MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGL 172 (364)
T ss_pred CeEEEEEeCCCC-CHHHHHH-----hcCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEECCCCcEEEEeCCC
Confidence 46899999964 6777664 2478899999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccc---
Q 002278 765 ARCIPTAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEA--- 841 (943)
Q Consensus 765 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~--- 841 (943)
++...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.+.+....+.......+.....
T Consensus 173 a~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (364)
T cd07875 173 ARTAGTSF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMK 250 (364)
T ss_pred ccccCCCC--cccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHH
Confidence 98654332 1223458999999999999999999999999999999999999998776655544333221111000
Q ss_pred -----------------------cCcccccCc---cCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 002278 842 -----------------------VDPEVSVTC---VDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLV 885 (943)
Q Consensus 842 -----------------------~~~~~~~~~---~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~ 885 (943)
..+...... ........+.+++.+|++.||++|||+.++++|-+
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp~ 320 (364)
T cd07875 251 KLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPY 320 (364)
T ss_pred hhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcCcc
Confidence 000000000 00011245678999999999999999999999854
No 182
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=1.9e-35 Score=319.31 Aligned_cols=246 Identities=26% Similarity=0.373 Sum_probs=197.8
Q ss_pred ccccceEEeeeceEEEEEEEec-CCceEEEEEeccc-CcccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEEc
Q 002278 617 NLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQ-YPHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYM 694 (943)
Q Consensus 617 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 694 (943)
+|+..+.||+|+||.||+|.+. +++.||+|.+... ......++.+|++++++++||||+++++++..+...++||||+
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 81 (279)
T cd06619 2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFM 81 (279)
T ss_pred cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecC
Confidence 5778889999999999999865 5788999988644 2334567889999999999999999999999999999999999
Q ss_pred cCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCCc
Q 002278 695 VNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPH 774 (943)
Q Consensus 695 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~~ 774 (943)
++++|..+. .+++..+..++.|++.|++|||+. +|+|+||||+||+++.++.++|+|||++.......
T Consensus 82 ~~~~l~~~~-------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~-- 149 (279)
T cd06619 82 DGGSLDVYR-------KIPEHVLGRIAVAVVKGLTYLWSL---KILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSI-- 149 (279)
T ss_pred CCCChHHhh-------cCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCCHHHEEECCCCCEEEeeCCcceeccccc--
Confidence 999986542 367888999999999999999999 99999999999999999999999999997654321
Q ss_pred eeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHH------HHHHHhccccccccccCccccc
Q 002278 775 ASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLH------QLIMSKADDNTVMEAVDPEVSV 848 (943)
Q Consensus 775 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~ 848 (943)
.....|+..|+|||++.+..++.++|||||||++|+|++|+.||....... ........ ...+....
T Consensus 150 -~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~ 222 (279)
T cd06619 150 -AKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVD------EDPPVLPV 222 (279)
T ss_pred -ccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhc------cCCCCCCC
Confidence 223458999999999999999999999999999999999999996432111 11111000 01111111
Q ss_pred CccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 002278 849 TCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLV 885 (943)
Q Consensus 849 ~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~ 885 (943)
. .....+.+++.+|++.+|++||++++++++.+
T Consensus 223 ~----~~~~~~~~li~~~l~~~P~~Rp~~~eil~~~~ 255 (279)
T cd06619 223 G----QFSEKFVHFITQCMRKQPKERPAPENLMDHPF 255 (279)
T ss_pred C----cCCHHHHHHHHHHhhCChhhCCCHHHHhcCcc
Confidence 1 11245778999999999999999999998854
No 183
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=3.4e-35 Score=320.36 Aligned_cols=259 Identities=25% Similarity=0.380 Sum_probs=203.5
Q ss_pred hccccceEEeeeceEEEEEEEecC-C--ceEEEEEecccC-cccHHHHHHHHHHHhcC-CCCCcceeeeEEecCCcceEE
Q 002278 616 ENLSEKYIVGYGASSTVYKCALKN-S--RPIAVKKLYNQY-PHNLREFETELETIGSI-RHRNIVSLHGYALSPYGNLLF 690 (943)
Q Consensus 616 ~~~~~~~~lG~G~~g~Vy~~~~~~-~--~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv 690 (943)
++|+..+.||+|+||.||+|..++ + ..+|+|.+.... ....+.+.+|+++++++ +||||+++++++......+++
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 81 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIA 81 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEE
Confidence 578889999999999999998764 3 346888776432 33446788999999999 699999999999999999999
Q ss_pred EEEccCCChhhhccCCC-------------CCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCce
Q 002278 691 YDYMVNGSLWDLLHGPS-------------KKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDA 757 (943)
Q Consensus 691 ~e~~~~g~L~~~l~~~~-------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~ 757 (943)
|||+++|+|.+++.... ....+++..+..++.|++.|++|||+. +|+||||||+||++++++.+
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~ 158 (297)
T cd05089 82 IEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEK---QFIHRDLAARNVLVGENLAS 158 (297)
T ss_pred EEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCcCCcceEEECCCCeE
Confidence 99999999999986421 123588999999999999999999998 99999999999999999999
Q ss_pred eecccccccccCCCCCceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCccHHHHHHHhcccc
Q 002278 758 HLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKADDN 836 (943)
Q Consensus 758 kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~ 836 (943)
||+|||++........ ......+..|+|||+..+..++.++|||||||++|||++ |..||...............
T Consensus 159 kl~dfg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~~~~~~-- 234 (297)
T cd05089 159 KIADFGLSRGEEVYVK--KTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKLPQG-- 234 (297)
T ss_pred EECCcCCCccccceec--cCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcC--
Confidence 9999999864322111 111123567999999998889999999999999999998 99999765543322221111
Q ss_pred ccccccCcccccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcCCCC
Q 002278 837 TVMEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLVSLLPAP 891 (943)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~~~~~~ 891 (943)
..+..+. .....+.+++.+||..+|.+||++.++++.|..+....
T Consensus 235 -----~~~~~~~-----~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~~ 279 (297)
T cd05089 235 -----YRMEKPR-----NCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEAR 279 (297)
T ss_pred -----CCCCCCC-----CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence 1111111 11246778999999999999999999999998777544
No 184
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=3.8e-35 Score=319.02 Aligned_cols=258 Identities=24% Similarity=0.355 Sum_probs=203.9
Q ss_pred ccccceEEeeeceEEEEEEEecC------CceEEEEEecccCc-ccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceE
Q 002278 617 NLSEKYIVGYGASSTVYKCALKN------SRPIAVKKLYNQYP-HNLREFETELETIGSIRHRNIVSLHGYALSPYGNLL 689 (943)
Q Consensus 617 ~~~~~~~lG~G~~g~Vy~~~~~~------~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 689 (943)
+|+..+.||+|+||.||+|.... ...+|+|.+..... .....+.+|+++++.++||||+++++.+...+..++
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 80 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLL 80 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEE
Confidence 36778899999999999998642 24688887764432 334678899999999999999999999999999999
Q ss_pred EEEEccCCChhhhccCCC---------------------CCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCcc
Q 002278 690 FYDYMVNGSLWDLLHGPS---------------------KKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSN 748 (943)
Q Consensus 690 v~e~~~~g~L~~~l~~~~---------------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~N 748 (943)
++||+.+|+|.+++.... ....+++.+++.++.|++.||+|||+. +++||||||+|
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~ivH~dikp~n 157 (290)
T cd05045 81 IVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEM---KLVHRDLAARN 157 (290)
T ss_pred EEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHC---Ceehhhhhhhe
Confidence 999999999999875321 123588999999999999999999998 99999999999
Q ss_pred EEECCCCceeecccccccccCCCCCc-eeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCccHH
Q 002278 749 ILIDENFDAHLSDFGIARCIPTAMPH-ASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLH 826 (943)
Q Consensus 749 ill~~~~~~kl~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~p~~~~~~~~ 826 (943)
|++++++.+||+|||+++........ ......++..|+|||...+..++.++||||||+++|||+| |+.||.+.....
T Consensus 158 ill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~ 237 (290)
T cd05045 158 VLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPER 237 (290)
T ss_pred EEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHHH
Confidence 99999999999999999865332221 1122335678999999988889999999999999999999 999997654333
Q ss_pred HHHHHhccccccccccCcccccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcCC
Q 002278 827 QLIMSKADDNTVMEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLVSLLP 889 (943)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~~~~ 889 (943)
.+.. ..... .+.... .....+.+++..|++.+|++||++.++++.|+.+..
T Consensus 238 ~~~~-~~~~~------~~~~~~-----~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~ 288 (290)
T cd05045 238 LFNL-LKTGY------RMERPE-----NCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMMV 288 (290)
T ss_pred HHHH-HhCCC------CCCCCC-----CCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHHh
Confidence 2222 11111 111111 112467799999999999999999999999988654
No 185
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=1.3e-35 Score=332.30 Aligned_cols=261 Identities=22% Similarity=0.244 Sum_probs=201.2
Q ss_pred HhhccccceEEeeeceEEEEEEEec-CCceEEEEEecccC--cccHHHHHHHHHHHhcCCCCCcceeeeEEecCC-----
Q 002278 614 STENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQY--PHNLREFETELETIGSIRHRNIVSLHGYALSPY----- 685 (943)
Q Consensus 614 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----- 685 (943)
..++|+..+.||+|+||.||+|.+. .++.||+|++.... ......+.+|+.+++.++||||+++++++....
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 94 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEF 94 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccc
Confidence 4578999999999999999999875 57889999986543 233456778999999999999999999986543
Q ss_pred -cceEEEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeeccccc
Q 002278 686 -GNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGI 764 (943)
Q Consensus 686 -~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGl 764 (943)
..++||||+++ ++.+.+. ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 95 ~~~~lv~e~~~~-~l~~~~~-----~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDikp~Nill~~~~~~kl~Dfg~ 165 (355)
T cd07874 95 QDVYLVMELMDA-NLCQVIQ-----MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGL 165 (355)
T ss_pred ceeEEEhhhhcc-cHHHHHh-----hcCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEECCCCCEEEeeCcc
Confidence 46899999965 6666664 2478899999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccc-----
Q 002278 765 ARCIPTAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVM----- 839 (943)
Q Consensus 765 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~----- 839 (943)
++...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.+......+.......+...
T Consensus 166 ~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (355)
T cd07874 166 ARTAGTSF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMK 243 (355)
T ss_pred cccCCCcc--ccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHH
Confidence 98654332 22234689999999999999999999999999999999999999987665444332221111000
Q ss_pred ----------------------cccCcc-cccCc-cCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 002278 840 ----------------------EAVDPE-VSVTC-VDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLV 885 (943)
Q Consensus 840 ----------------------~~~~~~-~~~~~-~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~ 885 (943)
...... ..... ........+.+++.+|++.||++|||+.|+++|-+
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~hp~ 313 (355)
T cd07874 244 KLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHPY 313 (355)
T ss_pred hhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcCcc
Confidence 000000 00000 00011245678999999999999999999999854
No 186
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=2.8e-35 Score=320.74 Aligned_cols=260 Identities=25% Similarity=0.381 Sum_probs=206.4
Q ss_pred HhhccccceEEeeeceEEEEEEEecC------CceEEEEEecccC-cccHHHHHHHHHHHhcC-CCCCcceeeeEEecCC
Q 002278 614 STENLSEKYIVGYGASSTVYKCALKN------SRPIAVKKLYNQY-PHNLREFETELETIGSI-RHRNIVSLHGYALSPY 685 (943)
Q Consensus 614 ~~~~~~~~~~lG~G~~g~Vy~~~~~~------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 685 (943)
..++|+..+.||+|+||.||+|..+. ...+|+|.+.... .....++.+|+++++++ +||||+++++++..++
T Consensus 10 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~ 89 (293)
T cd05053 10 PRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEG 89 (293)
T ss_pred CHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCC
Confidence 45678889999999999999998653 3578999886532 23345688999999999 7999999999999999
Q ss_pred cceEEEEEccCCChhhhccCC-------------CCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEEC
Q 002278 686 GNLLFYDYMVNGSLWDLLHGP-------------SKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILID 752 (943)
Q Consensus 686 ~~~lv~e~~~~g~L~~~l~~~-------------~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~ 752 (943)
..+++|||+++|+|.++++.. .....+++..++.++.|++.|++|||+. +|+||||||+||+++
T Consensus 90 ~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~Nil~~ 166 (293)
T cd05053 90 PLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASK---KCIHRDLAARNVLVT 166 (293)
T ss_pred CeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CccccccceeeEEEc
Confidence 999999999999999998632 1234689999999999999999999998 999999999999999
Q ss_pred CCCceeecccccccccCCCCCce-eeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCccHHHHHH
Q 002278 753 ENFDAHLSDFGIARCIPTAMPHA-STFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIM 830 (943)
Q Consensus 753 ~~~~~kl~DFGla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~ 830 (943)
+++.+||+|||+++.+....... .....++..|+|||+..+..++.++|||||||++||+++ |..||......... .
T Consensus 167 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~-~ 245 (293)
T cd05053 167 EDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELF-K 245 (293)
T ss_pred CCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHHHH-H
Confidence 99999999999998764332111 111234678999999998899999999999999999998 99999765432222 2
Q ss_pred HhccccccccccCcccccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcC
Q 002278 831 SKADDNTVMEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLVSLL 888 (943)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~~~ 888 (943)
....... +..+. .....+.+++.+|++.+|++|||+.++++.|+.+.
T Consensus 246 ~~~~~~~------~~~~~-----~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 246 LLKEGYR------MEKPQ-----NCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred HHHcCCc------CCCCC-----CCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence 1111110 11111 11246778999999999999999999999998754
No 187
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=2.4e-35 Score=319.27 Aligned_cols=253 Identities=22% Similarity=0.276 Sum_probs=199.9
Q ss_pred cccceEEeeeceEEEEEEEec-CCceEEEEEecccCc---ccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEE
Q 002278 618 LSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQYP---HNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDY 693 (943)
Q Consensus 618 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 693 (943)
|+..+.||+|+||+||+|... .++.||+|++..... .....+.+|+.+++.++|++|+++++.+.+.+..++||||
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL 81 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEe
Confidence 667788999999999999976 578999998864322 2234567899999999999999999999999999999999
Q ss_pred ccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCC
Q 002278 694 MVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMP 773 (943)
Q Consensus 694 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~ 773 (943)
+++|+|.+++... ....+++.++..++.|++.||+|||+. +|+||||||+||++++++.++|+|||++........
T Consensus 82 ~~g~~L~~~l~~~-~~~~l~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~ 157 (285)
T cd05630 82 MNGGDLKFHIYHM-GEAGFEEGRAVFYAAEICCGLEDLHQE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT 157 (285)
T ss_pred cCCCcHHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeccceeecCCCcc
Confidence 9999999988532 223589999999999999999999998 999999999999999999999999999976543321
Q ss_pred ceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccccCccCH
Q 002278 774 HASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDL 853 (943)
Q Consensus 774 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 853 (943)
.....|+..|+|||++.+..++.++||||+||++|||++|+.||..........................
T Consensus 158 --~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 227 (285)
T cd05630 158 --IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVQEEYSEK-------- 227 (285)
T ss_pred --ccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhhhhhhcCcc--------
Confidence 1223589999999999999999999999999999999999999985432111100000000011111111
Q ss_pred HHHHHHHHHHHHccCCCCCCCCC-----HHHHHHHHh
Q 002278 854 SAVRKTFQLALLCTKRYPSERPT-----MQEVARVLV 885 (943)
Q Consensus 854 ~~~~~l~~l~~~cl~~dP~~RPt-----~~el~~~L~ 885 (943)
....+.+++..||+.||++||| +.|+++|-+
T Consensus 228 -~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h~~ 263 (285)
T cd05630 228 -FSPDARSLCKMLLCKDPKERLGCQGGGAREVKEHPL 263 (285)
T ss_pred -CCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcChh
Confidence 1235678999999999999999 899988754
No 188
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=3.5e-35 Score=317.93 Aligned_cols=253 Identities=21% Similarity=0.268 Sum_probs=203.6
Q ss_pred ccccceEEeeeceEEEEEEEecC-CceEEEEEecccCcccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEEcc
Q 002278 617 NLSEKYIVGYGASSTVYKCALKN-SRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMV 695 (943)
Q Consensus 617 ~~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 695 (943)
.|+..+.||+|+||.||+|.... +..+|+|.+........+.+.+|+++++.++||||+++++++..+...++||||++
T Consensus 6 ~~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~ 85 (282)
T cd06643 6 FWEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCA 85 (282)
T ss_pred HHHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecC
Confidence 36677889999999999999774 66778888865555556778899999999999999999999999999999999999
Q ss_pred CCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCCce
Q 002278 696 NGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHA 775 (943)
Q Consensus 696 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~~~ 775 (943)
+|+|.+++.. ....+++..+..++.|++.||+|||+. +++||||||+||+++.++.+|++|||++........ .
T Consensus 86 ~~~l~~~~~~--~~~~l~~~~~~~~~~qi~~~L~~LH~~---~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~-~ 159 (282)
T cd06643 86 GGAVDAVMLE--LERPLTEPQIRVVCKQTLEALNYLHEN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQ-R 159 (282)
T ss_pred CCcHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEccCCCEEEcccccccccccccc-c
Confidence 9999988753 234689999999999999999999999 999999999999999999999999999976533221 1
Q ss_pred eeeEecccceeCccccc-----cCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccccCc
Q 002278 776 STFVLGTIGYIDPEYAH-----TSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTC 850 (943)
Q Consensus 776 ~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 850 (943)
.....|+..|+|||++. +..++.++||||+||++|||++|++||................... ...+..
T Consensus 160 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~----- 233 (282)
T cd06643 160 RDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPT-LAQPSR----- 233 (282)
T ss_pred cccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhhcCCCC-CCCccc-----
Confidence 22345899999999874 4457889999999999999999999998766544433332221110 011111
Q ss_pred cCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 002278 851 VDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLV 885 (943)
Q Consensus 851 ~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~ 885 (943)
....+.+++..||+.+|++||++.+++++-+
T Consensus 234 ----~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~ 264 (282)
T cd06643 234 ----WSSEFKDFLKKCLEKNVDARWTTTQLLQHPF 264 (282)
T ss_pred ----cCHHHHHHHHHHccCChhhCcCHHHHhcCCC
Confidence 1246778999999999999999999988765
No 189
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-36 Score=315.81 Aligned_cols=250 Identities=20% Similarity=0.257 Sum_probs=212.5
Q ss_pred hccccceEEeeeceEEEEEEEec-CCceEEEEEecccC--cccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEE
Q 002278 616 ENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQY--PHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYD 692 (943)
Q Consensus 616 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 692 (943)
+-|...+.||+|.|+.|-+|++- .|.+||||++.+.. ......+.+|++.|+.++|||||++|.+.......|+|+|
T Consensus 18 GLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLE 97 (864)
T KOG4717|consen 18 GLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILE 97 (864)
T ss_pred eeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEE
Confidence 45666778999999999999864 79999999997654 3345678899999999999999999999999999999999
Q ss_pred EccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEEC-CCCceeecccccccccCCC
Q 002278 693 YMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILID-ENFDAHLSDFGIARCIPTA 771 (943)
Q Consensus 693 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~-~~~~~kl~DFGla~~~~~~ 771 (943)
.-.+|+|+|++-. ....+.+.-..+++.||+.|+.|+|+. .+|||||||+||.+- .-|-||+.|||++..+..+
T Consensus 98 LGD~GDl~DyImK--He~Gl~E~La~kYF~QI~~AI~YCHqL---HVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG 172 (864)
T KOG4717|consen 98 LGDGGDLFDYIMK--HEEGLNEDLAKKYFAQIVHAISYCHQL---HVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPG 172 (864)
T ss_pred ecCCchHHHHHHh--hhccccHHHHHHHHHHHHHHHHHHhhh---hhhcccCCcceeEEeeecCceEeeeccccccCCCc
Confidence 9999999999863 344589999999999999999999998 999999999998875 5688999999999877654
Q ss_pred CCceeeeEecccceeCccccccCCCC-CcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccccCc
Q 002278 772 MPHASTFVLGTIGYIDPEYAHTSRLN-EKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTC 850 (943)
Q Consensus 772 ~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 850 (943)
. .-+..+|+..|-|||++.|..|+ +++||||+|||||-+++|++||+..++-+.+-.++.-...++..+
T Consensus 173 ~--kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImDCKYtvPshv-------- 242 (864)
T KOG4717|consen 173 K--KLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMDCKYTVPSHV-------- 242 (864)
T ss_pred c--hhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhhhcccccCchhh--------
Confidence 3 33456899999999999999887 589999999999999999999998777777666554444333332
Q ss_pred cCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 002278 851 VDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLV 885 (943)
Q Consensus 851 ~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~ 885 (943)
..++.++|..|+..||.+|.+..+++.+-|
T Consensus 243 -----S~eCrdLI~sMLvRdPkkRAslEeI~s~~W 272 (864)
T KOG4717|consen 243 -----SKECRDLIQSMLVRDPKKRASLEEIVSTSW 272 (864)
T ss_pred -----hHHHHHHHHHHHhcCchhhccHHHHhcccc
Confidence 356678999999999999999999998755
No 190
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=7.4e-35 Score=311.37 Aligned_cols=254 Identities=26% Similarity=0.412 Sum_probs=205.9
Q ss_pred hhccccceEEeeeceEEEEEEEecCCceEEEEEecccCcccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEEc
Q 002278 615 TENLSEKYIVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYM 694 (943)
Q Consensus 615 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 694 (943)
.++|+..+.||+|+||.||+|...++..+|+|.+... ....+.+.+|+++++.++|+||+++++++.. ...+++|||+
T Consensus 5 ~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~~ 82 (260)
T cd05073 5 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPG-SMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFM 82 (260)
T ss_pred ccceeEEeEecCccceEEEEEEecCCccEEEEecCCC-hhHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEeC
Confidence 4678889999999999999999877888999987643 2345678899999999999999999999887 7789999999
Q ss_pred cCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCCc
Q 002278 695 VNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPH 774 (943)
Q Consensus 695 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~~ 774 (943)
++|+|.+++... ....+++.++..++.|++.||+|||+. +++||||||+||+++.++.+||+|||.+.........
T Consensus 83 ~~~~L~~~~~~~-~~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~ 158 (260)
T cd05073 83 AKGSLLDFLKSD-EGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYT 158 (260)
T ss_pred CCCcHHHHHHhC-CccccCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCCcceeeccCCCcc
Confidence 999999998643 234678999999999999999999998 9999999999999999999999999999866443222
Q ss_pred eeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCccHHHHHHHhccccccccccCcccccCccCH
Q 002278 775 ASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDL 853 (943)
Q Consensus 775 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 853 (943)
......++..|+|||++.+..++.++|+|||||++|+++| |+.||............ ...... ...+
T Consensus 159 ~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~-~~~~~~--~~~~--------- 226 (260)
T cd05073 159 AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRAL-ERGYRM--PRPE--------- 226 (260)
T ss_pred cccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHH-hCCCCC--CCcc---------
Confidence 2222345678999999998889999999999999999999 99999865443322211 111110 0111
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhh
Q 002278 854 SAVRKTFQLALLCTKRYPSERPTMQEVARVLVS 886 (943)
Q Consensus 854 ~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~ 886 (943)
.....+.+++.+|++.+|++||++.++.+.|..
T Consensus 227 ~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 227 NCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred cCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 122467799999999999999999999998864
No 191
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=4e-35 Score=319.97 Aligned_cols=263 Identities=23% Similarity=0.327 Sum_probs=204.0
Q ss_pred hhccccceEEeeeceEEEEEEEecC-----------------CceEEEEEecccC-cccHHHHHHHHHHHhcCCCCCcce
Q 002278 615 TENLSEKYIVGYGASSTVYKCALKN-----------------SRPIAVKKLYNQY-PHNLREFETELETIGSIRHRNIVS 676 (943)
Q Consensus 615 ~~~~~~~~~lG~G~~g~Vy~~~~~~-----------------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~ 676 (943)
.++|+..+.||+|+||.||+|.... +..||+|++.... ....+.+.+|++++++++||||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~ 83 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR 83 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence 4678889999999999999998653 2458999886543 234567889999999999999999
Q ss_pred eeeEEecCCcceEEEEEccCCChhhhccCCC--------CCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCcc
Q 002278 677 LHGYALSPYGNLLFYDYMVNGSLWDLLHGPS--------KKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSN 748 (943)
Q Consensus 677 l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~--------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~N 748 (943)
+++++..++..+++|||+++++|.+++.... ....+++..++.++.|++.||+|||+. +|+||||||+|
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~---~i~H~dlkp~N 160 (296)
T cd05051 84 LLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESL---NFVHRDLATRN 160 (296)
T ss_pred EEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHc---Cccccccchhc
Confidence 9999999999999999999999999986422 122689999999999999999999999 99999999999
Q ss_pred EEECCCCceeecccccccccCCCCC-ceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHh--CCCCCCCCccH
Q 002278 749 ILIDENFDAHLSDFGIARCIPTAMP-HASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT--GKKAVDNESNL 825 (943)
Q Consensus 749 ill~~~~~~kl~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt--G~~p~~~~~~~ 825 (943)
|+++.++.++|+|||+++....... .......+++.|+|||+..+..++.++|||||||++|||++ |..||......
T Consensus 161 ili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~ 240 (296)
T cd05051 161 CLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQ 240 (296)
T ss_pred eeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcChH
Confidence 9999999999999999986533221 11223346778999999998889999999999999999998 77888755443
Q ss_pred HHHHHHhccccccccccCcccccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 002278 826 HQLIMSKADDNTVMEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLV 885 (943)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~ 885 (943)
..+............ ...... .......+.+++..|++.||++|||+.++++.|.
T Consensus 241 ~~~~~~~~~~~~~~~--~~~~~~---~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~ 295 (296)
T cd05051 241 QVIENAGHFFRDDGR--QIYLPR---PPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQ 295 (296)
T ss_pred HHHHHHHhccccccc--cccCCC---ccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence 332222111000000 000000 0011246889999999999999999999999875
No 192
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=6.4e-35 Score=313.25 Aligned_cols=249 Identities=24% Similarity=0.387 Sum_probs=202.2
Q ss_pred ccccceEEeeeceEEEEEEEec-CCceEEEEEecccCcc---------cHHHHHHHHHHHhcCCCCCcceeeeEEecCCc
Q 002278 617 NLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQYPH---------NLREFETELETIGSIRHRNIVSLHGYALSPYG 686 (943)
Q Consensus 617 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 686 (943)
+|.....||+|+||.||+|... +++.||+|.+...... ..+.+.+|++++++++||||+++++++.+.+.
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH 80 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence 3677789999999999999875 5788999988654321 12467889999999999999999999999999
Q ss_pred ceEEEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeeccccccc
Q 002278 687 NLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIAR 766 (943)
Q Consensus 687 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~ 766 (943)
.+++|||+++++|.+++. ....+++..+..++.|++.|++|||+. +++||||+|+||++++++.++|+|||.++
T Consensus 81 ~~lv~e~~~~~~L~~~l~---~~~~l~~~~~~~~~~~l~~~l~~lH~~---~ivH~di~p~nil~~~~~~~~l~dfg~~~ 154 (267)
T cd06628 81 LNIFLEYVPGGSVAALLN---NYGAFEETLVRNFVRQILKGLNYLHNR---GIIHRDIKGANILVDNKGGIKISDFGISK 154 (267)
T ss_pred cEEEEEecCCCCHHHHHH---hccCccHHHHHHHHHHHHHHHHHHHhc---CcccccCCHHHEEEcCCCCEEecccCCCc
Confidence 999999999999999996 335688999999999999999999998 99999999999999999999999999998
Q ss_pred ccCCCCC-----ceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccc
Q 002278 767 CIPTAMP-----HASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEA 841 (943)
Q Consensus 767 ~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 841 (943)
....... .......|+..|+|||.+.+..++.++||||+||++|+|++|+.||.............. .
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-------~ 227 (267)
T cd06628 155 KLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIGE-------N 227 (267)
T ss_pred ccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHHHHHHhc-------c
Confidence 7642211 111223478899999999988899999999999999999999999987654433322211 1
Q ss_pred cCcccccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002278 842 VDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARV 883 (943)
Q Consensus 842 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~ 883 (943)
..+.+.. .....+.+++.+||+.||++||++.+++++
T Consensus 228 ~~~~~~~-----~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 264 (267)
T cd06628 228 ASPEIPS-----NISSEAIDFLEKTFEIDHNKRPTAAELLKH 264 (267)
T ss_pred CCCcCCc-----ccCHHHHHHHHHHccCCchhCcCHHHHhhC
Confidence 1112211 112567789999999999999999999875
No 193
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=7.4e-35 Score=312.96 Aligned_cols=256 Identities=25% Similarity=0.430 Sum_probs=205.2
Q ss_pred hhccccceEEeeeceEEEEEEEecC-C---ceEEEEEecccC-cccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceE
Q 002278 615 TENLSEKYIVGYGASSTVYKCALKN-S---RPIAVKKLYNQY-PHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLL 689 (943)
Q Consensus 615 ~~~~~~~~~lG~G~~g~Vy~~~~~~-~---~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 689 (943)
..+|+..+.||+|+||.||+|..+. + ..+|+|++.... ....+.+..|+++++.++||||+++++++...+..++
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 83 (268)
T cd05063 4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMI 83 (268)
T ss_pred hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEE
Confidence 4578888999999999999999763 3 368999886542 3345678899999999999999999999999999999
Q ss_pred EEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccC
Q 002278 690 FYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIP 769 (943)
Q Consensus 690 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~ 769 (943)
||||+++++|.+++.. ....+++.++..++.|++.|++|||+. +++||||||+||++++++.+|++|||++....
T Consensus 84 v~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~ 158 (268)
T cd05063 84 ITEYMENGALDKYLRD--HDGEFSSYQLVGMLRGIAAGMKYLSDM---NYVHRDLAARNILVNSNLECKVSDFGLSRVLE 158 (268)
T ss_pred EEEcCCCCCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEEcCCCcEEECCCccceecc
Confidence 9999999999999863 235689999999999999999999999 99999999999999999999999999998764
Q ss_pred CCCCceee--eEecccceeCccccccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCccHHHHHHHhccccccccccCccc
Q 002278 770 TAMPHAST--FVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKADDNTVMEAVDPEV 846 (943)
Q Consensus 770 ~~~~~~~~--~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 846 (943)
........ ....+..|+|||++.+..++.++|||||||++|||++ |+.||............. .....+.
T Consensus 159 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i~-~~~~~~~------ 231 (268)
T cd05063 159 DDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAIN-DGFRLPA------ 231 (268)
T ss_pred cccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHh-cCCCCCC------
Confidence 33222111 1123457999999998889999999999999999998 999997655433222222 1111100
Q ss_pred ccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhc
Q 002278 847 SVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLVSL 887 (943)
Q Consensus 847 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~~ 887 (943)
.. .....+.+++.+||+.+|++||++.++++.|.++
T Consensus 232 ~~-----~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 232 PM-----DCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred CC-----CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 00 1225678999999999999999999999998764
No 194
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=5.7e-35 Score=323.56 Aligned_cols=256 Identities=22% Similarity=0.248 Sum_probs=200.9
Q ss_pred hccccceEEeeeceEEEEEEEecC-CceEEEEEecccC---cccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEE
Q 002278 616 ENLSEKYIVGYGASSTVYKCALKN-SRPIAVKKLYNQY---PHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFY 691 (943)
Q Consensus 616 ~~~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 691 (943)
++|+..+.||+|+||+||+++.+. ++.||+|.+.+.. ......+..|+.++..++|++|+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence 368889999999999999999764 6778999885421 223345788999999999999999999999999999999
Q ss_pred EEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCC
Q 002278 692 DYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTA 771 (943)
Q Consensus 692 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~ 771 (943)
||+++|+|.+++.. ....+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 81 ey~~~g~L~~~l~~--~~~~l~~~~~~~~~~qi~~al~~lH~~---~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~ 155 (332)
T cd05623 81 DYYVGGDLLTLLSK--FEDRLPEDMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFGSCLKLMED 155 (332)
T ss_pred eccCCCcHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEeecchheecccC
Confidence 99999999999963 234689999999999999999999999 9999999999999999999999999999765433
Q ss_pred CCceeeeEecccceeCccccc-----cCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCccc
Q 002278 772 MPHASTFVLGTIGYIDPEYAH-----TSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEV 846 (943)
Q Consensus 772 ~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 846 (943)
.........||+.|+|||++. ...++.++|||||||++|||++|+.||.................... .+...
T Consensus 156 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~--~p~~~ 233 (332)
T cd05623 156 GTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQ--FPAQV 233 (332)
T ss_pred CcceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCcccc--CCCcc
Confidence 333333456999999999886 34688999999999999999999999987765554444332221110 11100
Q ss_pred ccCccCHHHHHHHHHHHHHccCCCCCC--CCCHHHHHHHH
Q 002278 847 SVTCVDLSAVRKTFQLALLCTKRYPSE--RPTMQEVARVL 884 (943)
Q Consensus 847 ~~~~~~~~~~~~l~~l~~~cl~~dP~~--RPt~~el~~~L 884 (943)
......+.+++++|+..+|++ |+++.++++|-
T Consensus 234 ------~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h~ 267 (332)
T cd05623 234 ------TDVSEDAKDLIRRLICSREHRLGQNGIEDFKQHP 267 (332)
T ss_pred ------ccCCHHHHHHHHHHccChhhhcCCCCHHHHhCCC
Confidence 011245667888877554444 78999999884
No 195
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=5.1e-35 Score=313.66 Aligned_cols=251 Identities=25% Similarity=0.370 Sum_probs=203.8
Q ss_pred ccccceEEeeeceEEEEEEEecCCceEEEEEecccCc------ccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEE
Q 002278 617 NLSEKYIVGYGASSTVYKCALKNSRPIAVKKLYNQYP------HNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLF 690 (943)
Q Consensus 617 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 690 (943)
+|+..+.||+|+||+||+|...+++.+|+|.+..... .....+.+|+++++.++|+||+++++++.+.+..+++
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF 80 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence 4778889999999999999988889999998864321 1234688899999999999999999999999999999
Q ss_pred EEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCC
Q 002278 691 YDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPT 770 (943)
Q Consensus 691 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~ 770 (943)
|||+++++|.+++. ....+++..+..++.|++.|++|||+. +|+|+||+|+||++++++.++|+|||++.....
T Consensus 81 ~e~~~~~~L~~~l~---~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~ 154 (265)
T cd06631 81 MEFVPGGSISSILN---RFGPLPEPVFCKYTKQILDGVAYLHNN---CVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAW 154 (265)
T ss_pred EecCCCCcHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHhEEECCCCeEEeccchhhHhhhh
Confidence 99999999999986 334688999999999999999999998 999999999999999999999999999976532
Q ss_pred CC-----CceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcc
Q 002278 771 AM-----PHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPE 845 (943)
Q Consensus 771 ~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 845 (943)
.. ........|+..|+|||++.+..++.++||||+||++|+|++|+.||................... ....+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~ 233 (265)
T cd06631 155 VGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRGLM-PRLPDS 233 (265)
T ss_pred ccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhhccCCC-CCCCCC
Confidence 11 111123458899999999999889999999999999999999999998665544333222211111 111111
Q ss_pred cccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002278 846 VSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARV 883 (943)
Q Consensus 846 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~ 883 (943)
....+.+++.+||+.+|++||++.+++++
T Consensus 234 ---------~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 262 (265)
T cd06631 234 ---------FSAAAIDFVTSCLTRDQHERPSALQLLRH 262 (265)
T ss_pred ---------CCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 12467789999999999999999999875
No 196
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=7.2e-35 Score=313.41 Aligned_cols=256 Identities=25% Similarity=0.349 Sum_probs=205.2
Q ss_pred hccccceEEeeeceEEEEEEEecCC----ceEEEEEecccC-cccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEE
Q 002278 616 ENLSEKYIVGYGASSTVYKCALKNS----RPIAVKKLYNQY-PHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLF 690 (943)
Q Consensus 616 ~~~~~~~~lG~G~~g~Vy~~~~~~~----~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 690 (943)
++|...+.||+|+||.||+|.+.+. ..||+|...... ....+.+.+|+++++.++||||+++++++.+ ...++|
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~lv 84 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWIV 84 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEEE
Confidence 4678889999999999999986532 468889886554 3445678999999999999999999998875 467899
Q ss_pred EEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCC
Q 002278 691 YDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPT 770 (943)
Q Consensus 691 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~ 770 (943)
|||+++|+|.+++... ...+++.++..++.|++.||+|||+. +++||||||+||+++.++.+|++|||+++....
T Consensus 85 ~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~l~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~ 159 (270)
T cd05056 85 MELAPLGELRSYLQVN--KYSLDLASLILYSYQLSTALAYLESK---RFVHRDIAARNVLVSSPDCVKLGDFGLSRYLED 159 (270)
T ss_pred EEcCCCCcHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccChheEEEecCCCeEEccCceeeeccc
Confidence 9999999999999632 33589999999999999999999998 999999999999999999999999999987644
Q ss_pred CCCceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCccHHHHHHHhccccccccccCcccccC
Q 002278 771 AMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVT 849 (943)
Q Consensus 771 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 849 (943)
..........++..|+|||.+....++.++|||||||++||+++ |+.||.................. ...+.
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~---~~~~~---- 232 (270)
T cd05056 160 ESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIENGERL---PMPPN---- 232 (270)
T ss_pred ccceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCcC---CCCCC----
Confidence 32222222234568999999988889999999999999999986 99999876554433332221111 01111
Q ss_pred ccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcCC
Q 002278 850 CVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLVSLLP 889 (943)
Q Consensus 850 ~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~~~~ 889 (943)
....+.+++.+|+..+|++|||+.++++.|..+..
T Consensus 233 -----~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~ 267 (270)
T cd05056 233 -----CPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQ 267 (270)
T ss_pred -----CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 12467789999999999999999999999987654
No 197
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=5.3e-35 Score=311.56 Aligned_cols=250 Identities=22% Similarity=0.283 Sum_probs=203.5
Q ss_pred ccccceEEeeeceEEEEEEEec-CCceEEEEEeccc-CcccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEEc
Q 002278 617 NLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQ-YPHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYM 694 (943)
Q Consensus 617 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 694 (943)
+|+..+.||+|+||.||++... +++.+|+|.+... .....+.+.+|+.+++.++||||+++++++.+++..+++|||+
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYC 80 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeC
Confidence 4778899999999999999976 5788999988543 2344567888999999999999999999999999999999999
Q ss_pred cCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCCc
Q 002278 695 VNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPH 774 (943)
Q Consensus 695 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~~ 774 (943)
++|+|.+++... ....+++..+..++.|++.|++|||+. +|+|+||||+||++++++.++++|||.++........
T Consensus 81 ~~~~l~~~~~~~-~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~ 156 (255)
T cd08219 81 DGGDLMQKIKLQ-RGKLFPEDTILQWFVQMCLGVQHIHEK---RVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAY 156 (255)
T ss_pred CCCcHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEECCCCcEEEcccCcceeecccccc
Confidence 999999988532 234578999999999999999999999 9999999999999999999999999999866443222
Q ss_pred eeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccccCccCHH
Q 002278 775 ASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLS 854 (943)
Q Consensus 775 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 854 (943)
.....|++.|+|||++.+..++.++|+||||+++|+|++|+.||.................. .....
T Consensus 157 -~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~--------- 223 (255)
T cd08219 157 -ACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQGSYK---PLPSH--------- 223 (255)
T ss_pred -cccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHHHHHHhcCCCC---CCCcc---------
Confidence 22345889999999999888999999999999999999999999865543332222211111 11111
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002278 855 AVRKTFQLALLCTKRYPSERPTMQEVARV 883 (943)
Q Consensus 855 ~~~~l~~l~~~cl~~dP~~RPt~~el~~~ 883 (943)
....+.+++.+||+.||++||++.+++..
T Consensus 224 ~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 224 YSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred cCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 12356789999999999999999999764
No 198
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=1.4e-35 Score=316.89 Aligned_cols=254 Identities=29% Similarity=0.383 Sum_probs=202.0
Q ss_pred cccceEEeeeceEEEEEEEecC-CceEEEEEecccCcccHH--HHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEEc
Q 002278 618 LSEKYIVGYGASSTVYKCALKN-SRPIAVKKLYNQYPHNLR--EFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYM 694 (943)
Q Consensus 618 ~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~--~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 694 (943)
|+..+.||+|+||+||+|.... ++.||+|.+......... ...+|+.++++++||||+++++++.+....++||||+
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~ 80 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC 80 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence 5678899999999999999875 568999999766433222 3356999999999999999999999999999999999
Q ss_pred cCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCCc
Q 002278 695 VNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPH 774 (943)
Q Consensus 695 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~~ 774 (943)
++++|.+++. ....+++..+..++.|+++||++||+. +|+||||||+||++++++.++|+|||.+...... ..
T Consensus 81 ~~~~L~~~l~---~~~~~~~~~~~~~~~qi~~~L~~Lh~~---~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~-~~ 153 (260)
T PF00069_consen 81 PGGSLQDYLQ---KNKPLSEEEILKIAYQILEALAYLHSK---GIVHRDIKPENILLDENGEVKLIDFGSSVKLSEN-NE 153 (260)
T ss_dssp TTEBHHHHHH---HHSSBBHHHHHHHHHHHHHHHHHHHHT---TEEESSBSGGGEEESTTSEEEESSGTTTEESTST-TS
T ss_pred cccccccccc---ccccccccccccccccccccccccccc---cccccccccccccccccccccccccccccccccc-cc
Confidence 9999999996 456789999999999999999999999 9999999999999999999999999999864222 22
Q ss_pred eeeeEecccceeCccccc-cCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccccCccCH
Q 002278 775 ASTFVLGTIGYIDPEYAH-TSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDL 853 (943)
Q Consensus 775 ~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 853 (943)
......++..|+|||++. +..++.++||||+|+++|+|++|..||............................
T Consensus 154 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 227 (260)
T PF00069_consen 154 NFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSSSQQSR------ 227 (260)
T ss_dssp EBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHTTSHT------
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccccccc------
Confidence 333455899999999998 8889999999999999999999999998762222111111111100000000000
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 002278 854 SAVRKTFQLALLCTKRYPSERPTMQEVARVL 884 (943)
Q Consensus 854 ~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L 884 (943)
.....+.+++..|++.||++||++.+++++-
T Consensus 228 ~~~~~l~~li~~~l~~~p~~R~~~~~l~~~~ 258 (260)
T PF00069_consen 228 EKSEELRDLIKKMLSKDPEQRPSAEELLKHP 258 (260)
T ss_dssp TSHHHHHHHHHHHSSSSGGGSTTHHHHHTSG
T ss_pred hhHHHHHHHHHHHccCChhHCcCHHHHhcCC
Confidence 0125788999999999999999999998864
No 199
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=4.7e-35 Score=320.88 Aligned_cols=258 Identities=23% Similarity=0.320 Sum_probs=202.9
Q ss_pred hccccceEEeeeceEEEEEEEec-CCceEEEEEecccC-cccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEE
Q 002278 616 ENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQY-PHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDY 693 (943)
Q Consensus 616 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 693 (943)
++|+..+.||+|+||.||+|.+. ++..+|+|.+.... .....++.+|++++++++||||+++++++.+++..++||||
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey 80 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEH 80 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeec
Confidence 36888999999999999999976 46778888775432 23345688999999999999999999999999999999999
Q ss_pred ccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCC
Q 002278 694 MVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMP 773 (943)
Q Consensus 694 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~ 773 (943)
+++++|.+++. ....+++..+..++.|+++||+|||+.+ +++||||||+||+++.++.+||+|||++.......
T Consensus 81 ~~~~~L~~~l~---~~~~~~~~~~~~~~~~i~~~l~~lH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~- 154 (308)
T cd06615 81 MDGGSLDQVLK---KAGRIPENILGKISIAVLRGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM- 154 (308)
T ss_pred cCCCcHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHhhC--CEEECCCChHHEEEecCCcEEEccCCCcccccccc-
Confidence 99999999996 3356899999999999999999999732 89999999999999999999999999987653321
Q ss_pred ceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccc-ccc------------
Q 002278 774 HASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNT-VME------------ 840 (943)
Q Consensus 774 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~-~~~------------ 840 (943)
.....|+..|+|||+..+..++.++|||||||++|||++|+.||....... .......... ...
T Consensus 155 --~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (308)
T cd06615 155 --ANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKE-LEAMFGRPVSEGEAKESHRPVSGHPP 231 (308)
T ss_pred --cccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhh-HHHhhcCccccccccCCcccccCCCC
Confidence 123458899999999988889999999999999999999999997544222 1111111000 000
Q ss_pred -----------------ccCcccccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhh
Q 002278 841 -----------------AVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLVS 886 (943)
Q Consensus 841 -----------------~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~ 886 (943)
...|..+. ......+.+++.+|+..+|++|||+.+++++.+-
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~ 290 (308)
T cd06615 232 DSPRPMAIFELLDYIVNEPPPKLPS----GAFSDEFQDFVDKCLKKNPKERADLKELTKHPFI 290 (308)
T ss_pred CccchhhHHHHHHHHhcCCCccCcC----cccCHHHHHHHHHHccCChhhCcCHHHHhcChhh
Confidence 00011110 0122457899999999999999999999998653
No 200
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=3e-35 Score=319.66 Aligned_cols=252 Identities=23% Similarity=0.359 Sum_probs=203.8
Q ss_pred ccceEEeeeceEEEEEEEec-CCceEEEEEecccCcccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEEccCC
Q 002278 619 SEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNG 697 (943)
Q Consensus 619 ~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 697 (943)
.....||+|+||.||++... ++..||+|++........+.+.+|+.+++.++||||+++++.+..++..++||||++++
T Consensus 25 ~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~ 104 (292)
T cd06658 25 DSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEGG 104 (292)
T ss_pred hhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCCC
Confidence 33456999999999999875 57889999986555555667889999999999999999999999999999999999999
Q ss_pred ChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCCceee
Q 002278 698 SLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHAST 777 (943)
Q Consensus 698 ~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~ 777 (943)
+|.+++. ...+++.++..++.|++.|++|||+. +|+||||||+||++++++.++|+|||++......... ..
T Consensus 105 ~L~~~~~----~~~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~-~~ 176 (292)
T cd06658 105 ALTDIVT----HTRMNEEQIATVCLSVLRALSYLHNQ---GVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPK-RK 176 (292)
T ss_pred cHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEccCcchhhccccccc-Cc
Confidence 9999885 23588999999999999999999999 9999999999999999999999999999765433222 23
Q ss_pred eEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccccCccCHHHHH
Q 002278 778 FVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAVR 857 (943)
Q Consensus 778 ~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 857 (943)
...|+..|+|||...+..++.++|||||||++|||++|+.||............... ..+.+... .....
T Consensus 177 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~-------~~~~~~~~---~~~~~ 246 (292)
T cd06658 177 SLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDN-------LPPRVKDS---HKVSS 246 (292)
T ss_pred eeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc-------CCCccccc---cccCH
Confidence 346899999999999888999999999999999999999999876554332221111 11111100 01123
Q ss_pred HHHHHHHHccCCCCCCCCCHHHHHHHHhhcC
Q 002278 858 KTFQLALLCTKRYPSERPTMQEVARVLVSLL 888 (943)
Q Consensus 858 ~l~~l~~~cl~~dP~~RPt~~el~~~L~~~~ 888 (943)
.+.+++..|+..||++|||+.+++++-+-..
T Consensus 247 ~~~~li~~~l~~~P~~Rpt~~~il~~~~~~~ 277 (292)
T cd06658 247 VLRGFLDLMLVREPSQRATAQELLQHPFLKL 277 (292)
T ss_pred HHHHHHHHHccCChhHCcCHHHHhhChhhhc
Confidence 5678999999999999999999999855433
No 201
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=8.5e-35 Score=310.11 Aligned_cols=246 Identities=21% Similarity=0.326 Sum_probs=195.3
Q ss_pred EeeeceEEEEEEEec---CCceEEEEEecccCc-ccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEEccCCCh
Q 002278 624 VGYGASSTVYKCALK---NSRPIAVKKLYNQYP-HNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSL 699 (943)
Q Consensus 624 lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 699 (943)
||+|+||.||+|.++ .+..||+|.+..... ...+.+.+|++++++++||||+++++++.. +..++||||+++|+|
T Consensus 3 ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~-~~~~lv~e~~~~~~L 81 (257)
T cd05115 3 LGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCEA-EALMLVMEMASGGPL 81 (257)
T ss_pred cCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcC-CCeEEEEEeCCCCCH
Confidence 899999999999865 345689998865432 234568899999999999999999998854 578999999999999
Q ss_pred hhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCCcee--e
Q 002278 700 WDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHAS--T 777 (943)
Q Consensus 700 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~~~~--~ 777 (943)
.+++.. ....+++.++++++.|++.|++|||++ +++||||||+||+++.++.+||+|||+++.......... .
T Consensus 82 ~~~l~~--~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 156 (257)
T cd05115 82 NKFLSG--KKDEITVSNVVELMHQVSMGMKYLEGK---NFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARS 156 (257)
T ss_pred HHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHhc---CeeecccchheEEEcCCCcEEeccCCccccccCCccceeccC
Confidence 999863 234689999999999999999999999 999999999999999999999999999986543322111 1
Q ss_pred eEecccceeCccccccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCccHHHHHHHhccccccccccCcccccCccCHHHH
Q 002278 778 FVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAV 856 (943)
Q Consensus 778 ~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 856 (943)
...++..|+|||.+.+..++.++|||||||++||+++ |+.||.+............... +..+. ...
T Consensus 157 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~-------~~~~~-----~~~ 224 (257)
T cd05115 157 AGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQGKR-------LDCPA-----ECP 224 (257)
T ss_pred CCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCC-------CCCCC-----CCC
Confidence 1123578999999988889999999999999999996 9999986654332222211111 11111 112
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHHHHhhc
Q 002278 857 RKTFQLALLCTKRYPSERPTMQEVARVLVSL 887 (943)
Q Consensus 857 ~~l~~l~~~cl~~dP~~RPt~~el~~~L~~~ 887 (943)
..+.+++..||..+|++||++.++.+.|+.+
T Consensus 225 ~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 225 PEMYALMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 5677899999999999999999999998764
No 202
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=6.5e-35 Score=312.26 Aligned_cols=255 Identities=23% Similarity=0.344 Sum_probs=208.4
Q ss_pred hhccccceEEeeeceEEEEEEEec-CCceEEEEEecccCcccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEE
Q 002278 615 TENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDY 693 (943)
Q Consensus 615 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 693 (943)
.++|+..+.||+|+||.||+|... +++.+|+|.+........+.+.+|+++++.++||||+++++++......+++|||
T Consensus 2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~ 81 (262)
T cd06613 2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEY 81 (262)
T ss_pred ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeC
Confidence 357888999999999999999975 4678999998766555677899999999999999999999999999999999999
Q ss_pred ccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCC
Q 002278 694 MVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMP 773 (943)
Q Consensus 694 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~ 773 (943)
+++++|.+++.. ....+++.++..++.|++.|++|||+. +++||||||+||++++++.+||+|||.+........
T Consensus 82 ~~~~~l~~~~~~--~~~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~ 156 (262)
T cd06613 82 CGGGSLQDIYQV--TRGPLSELQIAYVCRETLKGLAYLHET---GKIHRDIKGANILLTEDGDVKLADFGVSAQLTATIA 156 (262)
T ss_pred CCCCcHHHHHHh--hccCCCHHHHHHHHHHHHHHHHHHHhC---CceecCCChhhEEECCCCCEEECccccchhhhhhhh
Confidence 999999998863 225689999999999999999999998 999999999999999999999999999986643221
Q ss_pred ceeeeEecccceeCccccccC---CCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccccCc
Q 002278 774 HASTFVLGTIGYIDPEYAHTS---RLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTC 850 (943)
Q Consensus 774 ~~~~~~~gt~~y~aPE~~~~~---~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 850 (943)
......++..|+|||...+. .++.++|||||||++|||+||+.||................... +...
T Consensus 157 -~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~-----~~~~--- 227 (262)
T cd06613 157 -KRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKSNFPP-----PKLK--- 227 (262)
T ss_pred -ccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCC-----cccc---
Confidence 12234588899999998876 78999999999999999999999998765444333222211110 0000
Q ss_pred cCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002278 851 VDLSAVRKTFQLALLCTKRYPSERPTMQEVARV 883 (943)
Q Consensus 851 ~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~ 883 (943)
........+.+++.+||..+|++|||+.+++.+
T Consensus 228 ~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 260 (262)
T cd06613 228 DKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQH 260 (262)
T ss_pred chhhhhHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 011233567899999999999999999999875
No 203
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=8.1e-35 Score=317.88 Aligned_cols=259 Identities=24% Similarity=0.330 Sum_probs=206.0
Q ss_pred HhhccccceEEeeeceEEEEEEEec------CCceEEEEEecccC-cccHHHHHHHHHHHhcC-CCCCcceeeeEEecCC
Q 002278 614 STENLSEKYIVGYGASSTVYKCALK------NSRPIAVKKLYNQY-PHNLREFETELETIGSI-RHRNIVSLHGYALSPY 685 (943)
Q Consensus 614 ~~~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 685 (943)
..++|...+.||+|+||.||+|... .+..||+|.+.... ....+.+.+|+++++++ +||||+++++++...+
T Consensus 33 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 112 (302)
T cd05055 33 PRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGG 112 (302)
T ss_pred cHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCC
Confidence 3467889999999999999999752 24579999886543 23345788999999999 7999999999999999
Q ss_pred cceEEEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccc
Q 002278 686 GNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIA 765 (943)
Q Consensus 686 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla 765 (943)
..+++|||+++|+|.+++.... ...+++.++..++.|++.||+|||+. +|+|+||||+||+++.++.++++|||++
T Consensus 113 ~~~lv~e~~~~~~L~~~i~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~dfg~~ 188 (302)
T cd05055 113 PILVITEYCCYGDLLNFLRRKR-ESFLTLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNVLLTHGKIVKICDFGLA 188 (302)
T ss_pred ceEEEEEcCCCCcHHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeehhhhccceEEEcCCCeEEECCCccc
Confidence 9999999999999999986422 23489999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCc-eeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCccHHHHHHHhccccccccccC
Q 002278 766 RCIPTAMPH-ASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKADDNTVMEAVD 843 (943)
Q Consensus 766 ~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 843 (943)
+........ ......++..|+|||.+.+..++.++||||+||++|||++ |+.||................... ...
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~~~~~~~--~~~ 266 (302)
T cd05055 189 RDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIKEGYRM--AQP 266 (302)
T ss_pred ccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHHHcCCcC--CCC
Confidence 866433211 1112235678999999999899999999999999999998 999997655433332222111110 000
Q ss_pred cccccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhc
Q 002278 844 PEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLVSL 887 (943)
Q Consensus 844 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~~ 887 (943)
+ .....+.+++.+|+.++|++|||+.++++.|...
T Consensus 267 ~---------~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 267 E---------HAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred C---------CCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 0 1124678999999999999999999999998763
No 204
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=8.5e-35 Score=315.86 Aligned_cols=261 Identities=23% Similarity=0.354 Sum_probs=204.7
Q ss_pred HhhccccceEEeeeceEEEEEEEecC------CceEEEEEecccC-cccHHHHHHHHHHHhcCCCCCcceeeeEEecCCc
Q 002278 614 STENLSEKYIVGYGASSTVYKCALKN------SRPIAVKKLYNQY-PHNLREFETELETIGSIRHRNIVSLHGYALSPYG 686 (943)
Q Consensus 614 ~~~~~~~~~~lG~G~~g~Vy~~~~~~------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 686 (943)
..++|++.+.||+|+||.||+|..++ +..||+|.+.... ......+.+|+.+++.++||||+++++++.+...
T Consensus 4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 83 (288)
T cd05061 4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQP 83 (288)
T ss_pred cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 45789999999999999999997542 4579999875433 2234467889999999999999999999999999
Q ss_pred ceEEEEEccCCChhhhccCCC-------CCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceee
Q 002278 687 NLLFYDYMVNGSLWDLLHGPS-------KKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHL 759 (943)
Q Consensus 687 ~~lv~e~~~~g~L~~~l~~~~-------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl 759 (943)
.++||||+++|+|.+++.... .....++..+..++.|++.||+|||++ +|+||||||+||++++++.+++
T Consensus 84 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dikp~nili~~~~~~~L 160 (288)
T cd05061 84 TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKI 160 (288)
T ss_pred cEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCCChheEEEcCCCcEEE
Confidence 999999999999999996321 123457788899999999999999999 9999999999999999999999
Q ss_pred cccccccccCCCCCc-eeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCccHHHHHHHhccccc
Q 002278 760 SDFGIARCIPTAMPH-ASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKADDNT 837 (943)
Q Consensus 760 ~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~ 837 (943)
+|||+++........ ......++..|+|||...+..++.++|||||||++|||++ |..||.+..... ..........
T Consensus 161 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~-~~~~~~~~~~ 239 (288)
T cd05061 161 GDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQ-VLKFVMDGGY 239 (288)
T ss_pred CcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHH-HHHHHHcCCC
Confidence 999999865332211 1112235678999999998899999999999999999999 788987644322 2222111111
Q ss_pred cccccCcccccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcCC
Q 002278 838 VMEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLVSLLP 889 (943)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~~~~ 889 (943)
. .... .....+.+++..|++.||++|||+.++++.++....
T Consensus 240 ~------~~~~-----~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~ 280 (288)
T cd05061 240 L------DQPD-----NCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLH 280 (288)
T ss_pred C------CCCC-----CCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcC
Confidence 0 0110 112467899999999999999999999999987543
No 205
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=8.8e-35 Score=314.28 Aligned_cols=258 Identities=23% Similarity=0.349 Sum_probs=203.0
Q ss_pred hhccccceEEeeeceEEEEEEEec-CCc----eEEEEEecccC-cccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcce
Q 002278 615 TENLSEKYIVGYGASSTVYKCALK-NSR----PIAVKKLYNQY-PHNLREFETELETIGSIRHRNIVSLHGYALSPYGNL 688 (943)
Q Consensus 615 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 688 (943)
..+|+..+.||+|+||+||+|.+. +++ +||+|.+.... ....+.+.+|+.+++.+.||||+++++++... ..+
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~ 84 (279)
T cd05109 6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLTS-TVQ 84 (279)
T ss_pred hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCC-CcE
Confidence 457888899999999999999864 333 48999886543 33456788999999999999999999999754 578
Q ss_pred EEEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeeccccccccc
Q 002278 689 LFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCI 768 (943)
Q Consensus 689 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~ 768 (943)
+++||+++|+|.+++.. ....+++.++..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++..
T Consensus 85 l~~~~~~~g~l~~~l~~--~~~~~~~~~~~~~~~qi~~~L~~lH~~---~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~ 159 (279)
T cd05109 85 LVTQLMPYGCLLDYVRE--NKDRIGSQDLLNWCVQIAKGMSYLEEV---RLVHRDLAARNVLVKSPNHVKITDFGLARLL 159 (279)
T ss_pred EEEEcCCCCCHHHHHhh--ccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEEEcCCCcEEECCCCceeec
Confidence 99999999999999863 234689999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCce-eeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCccHHHHHHHhccccccccccCccc
Q 002278 769 PTAMPHA-STFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKADDNTVMEAVDPEV 846 (943)
Q Consensus 769 ~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 846 (943)
....... .....++..|+|||...+..++.++|||||||++|||++ |..||......... .......... ..+
T Consensus 160 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~-~~~~~~~~~~--~~~-- 234 (279)
T cd05109 160 DIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIP-DLLEKGERLP--QPP-- 234 (279)
T ss_pred ccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHH-HHHHCCCcCC--CCc--
Confidence 4332211 111224678999999998899999999999999999998 99999765432211 1111111110 011
Q ss_pred ccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcCCC
Q 002278 847 SVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLVSLLPA 890 (943)
Q Consensus 847 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~~~~~ 890 (943)
.....+.+++..||+.||++||++.++++.+..+...
T Consensus 235 -------~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~ 271 (279)
T cd05109 235 -------ICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMARD 271 (279)
T ss_pred -------cCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcC
Confidence 1124677899999999999999999999998776543
No 206
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=8.9e-35 Score=312.07 Aligned_cols=255 Identities=27% Similarity=0.415 Sum_probs=204.2
Q ss_pred hccccceEEeeeceEEEEEEEecC----CceEEEEEecccC-cccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEE
Q 002278 616 ENLSEKYIVGYGASSTVYKCALKN----SRPIAVKKLYNQY-PHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLF 690 (943)
Q Consensus 616 ~~~~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 690 (943)
.+|+..+.||+|+||.||+|.++. +..+|+|.+.... ....+.+.+|+.++++++||||+++++++..++..++|
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 83 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIV 83 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence 578888999999999999998652 3368999886543 23456788999999999999999999999999999999
Q ss_pred EEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCC
Q 002278 691 YDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPT 770 (943)
Q Consensus 691 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~ 770 (943)
|||+++++|.+++... ...+++.++..++.|++.|++|||+. +++||||||+||+++.++.++++|||++..+..
T Consensus 84 ~e~~~~~~L~~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd05066 84 TEYMENGSLDAFLRKH--DGQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILVNSNLVCKVSDFGLSRVLED 158 (267)
T ss_pred EEcCCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CEeehhhchhcEEECCCCeEEeCCCCccccccc
Confidence 9999999999998632 34689999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCceeee--EecccceeCccccccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCccHHHHHHHhccccccccccCcccc
Q 002278 771 AMPHASTF--VLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKADDNTVMEAVDPEVS 847 (943)
Q Consensus 771 ~~~~~~~~--~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 847 (943)
........ ..++..|+|||++.+..++.++|+|||||++||+++ |+.||............. ...... ..
T Consensus 159 ~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~~-~~~~~~------~~ 231 (267)
T cd05066 159 DPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIE-EGYRLP------AP 231 (267)
T ss_pred ccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHHh-CCCcCC------CC
Confidence 32222111 123568999999998899999999999999999887 999997654433222221 111110 01
Q ss_pred cCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhc
Q 002278 848 VTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLVSL 887 (943)
Q Consensus 848 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~~ 887 (943)
. .....+.+++.+|++.+|++||++.++++.|..+
T Consensus 232 ~-----~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 232 M-----DCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred C-----CCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 0 1124667899999999999999999999998764
No 207
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=5.9e-35 Score=315.36 Aligned_cols=256 Identities=24% Similarity=0.357 Sum_probs=204.9
Q ss_pred hhccccceEEeeeceEEEEEEEecC------CceEEEEEecccC-cccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcc
Q 002278 615 TENLSEKYIVGYGASSTVYKCALKN------SRPIAVKKLYNQY-PHNLREFETELETIGSIRHRNIVSLHGYALSPYGN 687 (943)
Q Consensus 615 ~~~~~~~~~lG~G~~g~Vy~~~~~~------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 687 (943)
.++|+..+.||+|+||.||+|..+. +..||+|.+.... ......+.+|+++++.++||||+++++++......
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~ 84 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPT 84 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCc
Confidence 4678889999999999999998753 3679999986443 23345788999999999999999999999999999
Q ss_pred eEEEEEccCCChhhhccCCCC-------CccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeec
Q 002278 688 LLFYDYMVNGSLWDLLHGPSK-------KVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLS 760 (943)
Q Consensus 688 ~lv~e~~~~g~L~~~l~~~~~-------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~ 760 (943)
++||||+++|+|.+++..... ...+++..+..++.|++.||+|||+. +++||||||+||++++++.+||+
T Consensus 85 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~di~p~nill~~~~~~kl~ 161 (277)
T cd05032 85 LVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAK---KFVHRDLAARNCMVAEDLTVKIG 161 (277)
T ss_pred EEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccChheEEEcCCCCEEEC
Confidence 999999999999999864221 23478899999999999999999998 99999999999999999999999
Q ss_pred ccccccccCCCCC-ceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCccHHHHHHHhcccccc
Q 002278 761 DFGIARCIPTAMP-HASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKADDNTV 838 (943)
Q Consensus 761 DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~ 838 (943)
|||+++....... .......++..|+|||.+.+..++.++|||||||++||++| |+.||............. ... .
T Consensus 162 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~-~~~-~ 239 (277)
T cd05032 162 DFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVI-DGG-H 239 (277)
T ss_pred CcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHHHHHHHh-cCC-C
Confidence 9999986543321 11222346789999999988889999999999999999998 999997654433222221 111 1
Q ss_pred ccccCcccccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 002278 839 MEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLV 885 (943)
Q Consensus 839 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~ 885 (943)
+..+.. ....+.+++.+||+.+|++|||+.++++.|+
T Consensus 240 -----~~~~~~-----~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 276 (277)
T cd05032 240 -----LDLPEN-----CPDKLLELMRMCWQYNPKMRPTFLEIVSSLK 276 (277)
T ss_pred -----CCCCCC-----CCHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence 111111 1356789999999999999999999999875
No 208
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=4e-35 Score=319.62 Aligned_cols=254 Identities=23% Similarity=0.329 Sum_probs=207.4
Q ss_pred HhhccccceEEeeeceEEEEEEEec-CCceEEEEEecccCcccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEE
Q 002278 614 STENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYD 692 (943)
Q Consensus 614 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 692 (943)
...+|+..+.||+|+||.||+|... +++.||+|.+........+.+.+|+.+++.++||||+++++++..++..++|||
T Consensus 17 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e 96 (297)
T cd06656 17 PKKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVME 96 (297)
T ss_pred hhhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeec
Confidence 3468889999999999999999964 688999999876555556778899999999999999999999999999999999
Q ss_pred EccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCC
Q 002278 693 YMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAM 772 (943)
Q Consensus 693 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~ 772 (943)
|+++++|.+++. ...+++.++..++.|++.||.|||+. +++||||||+||+++.++.++|+|||++.......
T Consensus 97 ~~~~~~L~~~~~----~~~~~~~~~~~~~~~l~~~L~~LH~~---~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~ 169 (297)
T cd06656 97 YLAGGSLTDVVT----ETCMDEGQIAAVCRECLQALDFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ 169 (297)
T ss_pred ccCCCCHHHHHH----hCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEECcCccceEccCCc
Confidence 999999999985 24578999999999999999999999 99999999999999999999999999998654332
Q ss_pred CceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccccCccC
Q 002278 773 PHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVD 852 (943)
Q Consensus 773 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 852 (943)
.. .....|++.|+|||...+..++.++|||||||++|++++|+.||................ .+.... .
T Consensus 170 ~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~~~~-------~~~~~~---~ 238 (297)
T cd06656 170 SK-RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNG-------TPELQN---P 238 (297)
T ss_pred cC-cCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeeccCC-------CCCCCC---c
Confidence 21 223458899999999999889999999999999999999999997655432221111110 001000 0
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 002278 853 LSAVRKTFQLALLCTKRYPSERPTMQEVARVLV 885 (943)
Q Consensus 853 ~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~ 885 (943)
......+.+++.+||+.+|++||++.+++++-+
T Consensus 239 ~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~ 271 (297)
T cd06656 239 ERLSAVFRDFLNRCLEMDVDRRGSAKELLQHPF 271 (297)
T ss_pred cccCHHHHHHHHHHccCChhhCcCHHHHhcCch
Confidence 011245678999999999999999999999744
No 209
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=2.8e-35 Score=321.86 Aligned_cols=261 Identities=25% Similarity=0.382 Sum_probs=203.9
Q ss_pred hhccccceEEeeeceEEEEEEEecC-Cc--eEEEEEecccC-cccHHHHHHHHHHHhcC-CCCCcceeeeEEecCCcceE
Q 002278 615 TENLSEKYIVGYGASSTVYKCALKN-SR--PIAVKKLYNQY-PHNLREFETELETIGSI-RHRNIVSLHGYALSPYGNLL 689 (943)
Q Consensus 615 ~~~~~~~~~lG~G~~g~Vy~~~~~~-~~--~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 689 (943)
.++|+..+.||+|+||.||+|.++. +. .+|+|++.... ......+.+|++++.++ +||||+++++++..++..++
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~l 85 (303)
T cd05088 6 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL 85 (303)
T ss_pred hhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceE
Confidence 4678888999999999999999753 43 45777765432 23445788999999999 89999999999999999999
Q ss_pred EEEEccCCChhhhccCCC-------------CCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCc
Q 002278 690 FYDYMVNGSLWDLLHGPS-------------KKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFD 756 (943)
Q Consensus 690 v~e~~~~g~L~~~l~~~~-------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~ 756 (943)
||||+++|+|.+++.... ....+++.+++.++.|++.|++|||+. +++||||||+||++++++.
T Consensus 86 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dlkp~Nili~~~~~ 162 (303)
T cd05088 86 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYV 162 (303)
T ss_pred EEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEecCCCc
Confidence 999999999999986422 123588999999999999999999999 9999999999999999999
Q ss_pred eeecccccccccCCCCCceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCccHHHHHHHhccc
Q 002278 757 AHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKADD 835 (943)
Q Consensus 757 ~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~ 835 (943)
+||+|||+++...... ......++..|+|||++.+..++.++|||||||++|||+| |..||........... ....
T Consensus 163 ~kl~dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~-~~~~ 239 (303)
T cd05088 163 AKIADFGLSRGQEVYV--KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEK-LPQG 239 (303)
T ss_pred EEeCccccCcccchhh--hcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHHHHHH-HhcC
Confidence 9999999986432111 1111224668999999988889999999999999999998 9999976543322211 1111
Q ss_pred cccccccCcccccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcCCCCC
Q 002278 836 NTVMEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLVSLLPAPP 892 (943)
Q Consensus 836 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~~~~~~~ 892 (943)
..+.... .....+.+++.+||+.+|++||++.++++.++.+.....
T Consensus 240 ------~~~~~~~-----~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~~~ 285 (303)
T cd05088 240 ------YRLEKPL-----NCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERK 285 (303)
T ss_pred ------CcCCCCC-----CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhh
Confidence 0111111 112456789999999999999999999999987665443
No 210
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=3.8e-35 Score=318.39 Aligned_cols=256 Identities=22% Similarity=0.338 Sum_probs=202.0
Q ss_pred hccccceEEeeeceEEEEEEEec-CCceEEEEEecccC-cccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEE
Q 002278 616 ENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQY-PHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDY 693 (943)
Q Consensus 616 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 693 (943)
++|+..+.||+|+||.||+|.++ .++.||+|.+.... ......+.+|++++++++||||+++++++..++..++||||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEY 80 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEee
Confidence 36788899999999999999976 68899999886432 33346788999999999999999999999999999999999
Q ss_pred ccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCC
Q 002278 694 MVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMP 773 (943)
Q Consensus 694 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~ 773 (943)
+++++|..++........+++..+..++.|++.|+.|||+.+ +|+||||||+||+++.++.+||+|||.+..+.....
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 158 (286)
T cd06622 81 MDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEH--NIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASLA 158 (286)
T ss_pred cCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcC--CEeeCCCCHHHEEECCCCCEEEeecCCcccccCCcc
Confidence 999999998874333447899999999999999999999632 899999999999999999999999999976533221
Q ss_pred ceeeeEecccceeCccccccCC------CCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccc
Q 002278 774 HASTFVLGTIGYIDPEYAHTSR------LNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVS 847 (943)
Q Consensus 774 ~~~~~~~gt~~y~aPE~~~~~~------~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 847 (943)
....|++.|+|||.+.+.. ++.++||||+||++|||++|+.||......................+.+.
T Consensus 159 ---~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~-- 233 (286)
T cd06622 159 ---KTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDGDPPTLPSG-- 233 (286)
T ss_pred ---ccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhhcCCCCCCcc--
Confidence 2234788999999886543 57899999999999999999999975433221111110000111111111
Q ss_pred cCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 002278 848 VTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLV 885 (943)
Q Consensus 848 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~ 885 (943)
....+.+++.+|+..+|++||++.+++.+-+
T Consensus 234 -------~~~~~~~li~~~l~~~p~~Rp~~~~l~~~~~ 264 (286)
T cd06622 234 -------YSDDAQDFVAKCLNKIPNRRPTYAQLLEHPW 264 (286)
T ss_pred -------cCHHHHHHHHHHcccCcccCCCHHHHhcChh
Confidence 2256678999999999999999999998754
No 211
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=5.9e-35 Score=318.25 Aligned_cols=259 Identities=23% Similarity=0.350 Sum_probs=200.6
Q ss_pred hhccccceEEeeeceEEEEEEEecC---------------CceEEEEEecccC-cccHHHHHHHHHHHhcCCCCCcceee
Q 002278 615 TENLSEKYIVGYGASSTVYKCALKN---------------SRPIAVKKLYNQY-PHNLREFETELETIGSIRHRNIVSLH 678 (943)
Q Consensus 615 ~~~~~~~~~lG~G~~g~Vy~~~~~~---------------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~ 678 (943)
.++|+..+.||+|+||.||+|.... ...||+|++.... ......+.+|++++++++||||++++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~ 83 (295)
T cd05097 4 RQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLL 83 (295)
T ss_pred hHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEE
Confidence 3578889999999999999987642 2348999886542 23345788999999999999999999
Q ss_pred eEEecCCcceEEEEEccCCChhhhccCCC---------CCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccE
Q 002278 679 GYALSPYGNLLFYDYMVNGSLWDLLHGPS---------KKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNI 749 (943)
Q Consensus 679 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~---------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Ni 749 (943)
+++......++||||+++++|.+++.... ....+++.+++.++.|++.|++|||+. +++||||||+||
T Consensus 84 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~Ni 160 (295)
T cd05097 84 GVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASL---NFVHRDLATRNC 160 (295)
T ss_pred EEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhc---CeeccccChhhE
Confidence 99999999999999999999999885321 112478899999999999999999999 999999999999
Q ss_pred EECCCCceeecccccccccCCCCCc-eeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHh--CCCCCCCCccHH
Q 002278 750 LIDENFDAHLSDFGIARCIPTAMPH-ASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT--GKKAVDNESNLH 826 (943)
Q Consensus 750 ll~~~~~~kl~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt--G~~p~~~~~~~~ 826 (943)
++++++.+||+|||++......... ......++..|+|||+..+..++.++|||||||++|||++ |..||.......
T Consensus 161 ll~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~ 240 (295)
T cd05097 161 LVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQ 240 (295)
T ss_pred EEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChHH
Confidence 9999999999999999765432211 1122335678999999998889999999999999999998 667887544322
Q ss_pred HHHHHhc---cc-cccccccCcccccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 002278 827 QLIMSKA---DD-NTVMEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLV 885 (943)
Q Consensus 827 ~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~ 885 (943)
....... .. ........+. ....+.+++.+|++.+|++||++.++++.|+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~---------~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~ 294 (295)
T cd05097 241 VIENTGEFFRNQGRQIYLSQTPL---------CPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR 294 (295)
T ss_pred HHHHHHHhhhhccccccCCCCCC---------CCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence 1111110 00 0000001111 1247889999999999999999999999875
No 212
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=4.7e-35 Score=322.67 Aligned_cols=195 Identities=26% Similarity=0.398 Sum_probs=159.6
Q ss_pred ceEEeeeceEEEEEEEec---CCceEEEEEecccCcccHHHHHHHHHHHhcCCCCCcceeeeEEec--CCcceEEEEEcc
Q 002278 621 KYIVGYGASSTVYKCALK---NSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYALS--PYGNLLFYDYMV 695 (943)
Q Consensus 621 ~~~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~lv~e~~~ 695 (943)
...||+|+||+||+|..+ .++.||+|.+.... ....+.+|++++++++||||+++++++.. +...+++|||+.
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE 83 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC--CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC
Confidence 357999999999999865 45789999886432 23567889999999999999999999864 345789999985
Q ss_pred CCChhhhccCCC------CCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEE----CCCCceeecccccc
Q 002278 696 NGSLWDLLHGPS------KKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILI----DENFDAHLSDFGIA 765 (943)
Q Consensus 696 ~g~L~~~l~~~~------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill----~~~~~~kl~DFGla 765 (943)
++|.+++.... ....+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||++
T Consensus 84 -~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a 159 (317)
T cd07868 84 -HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMGFA 159 (317)
T ss_pred -CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEecCCCCcCcEEEeecCce
Confidence 58877764211 223588999999999999999999999 99999999999999 45678999999999
Q ss_pred cccCCCCCc--eeeeEecccceeCcccccc-CCCCCcchhhhHHHHHHHHHhCCCCCCC
Q 002278 766 RCIPTAMPH--ASTFVLGTIGYIDPEYAHT-SRLNEKSDVYSFGIVLLEILTGKKAVDN 821 (943)
Q Consensus 766 ~~~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltG~~p~~~ 821 (943)
+........ ......||+.|+|||++.+ ..++.++||||+||++|||++|++||..
T Consensus 160 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~ 218 (317)
T cd07868 160 RLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 218 (317)
T ss_pred eccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccC
Confidence 876443211 1233568999999999877 4589999999999999999999999964
No 213
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=8e-35 Score=318.70 Aligned_cols=261 Identities=23% Similarity=0.380 Sum_probs=207.0
Q ss_pred HhhccccceEEeeeceEEEEEEEec--------CCceEEEEEecccC-cccHHHHHHHHHHHhcC-CCCCcceeeeEEec
Q 002278 614 STENLSEKYIVGYGASSTVYKCALK--------NSRPIAVKKLYNQY-PHNLREFETELETIGSI-RHRNIVSLHGYALS 683 (943)
Q Consensus 614 ~~~~~~~~~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 683 (943)
..++|...+.||+|+||.||+|+.. ++..||+|.+.... ....+.+.+|+.+++.+ +||||+++++++..
T Consensus 13 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~ 92 (304)
T cd05101 13 SRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 92 (304)
T ss_pred cHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEec
Confidence 4567888999999999999999742 23478999886432 33456788999999999 79999999999999
Q ss_pred CCcceEEEEEccCCChhhhccCCCC-------------CccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEE
Q 002278 684 PYGNLLFYDYMVNGSLWDLLHGPSK-------------KVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNIL 750 (943)
Q Consensus 684 ~~~~~lv~e~~~~g~L~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nil 750 (943)
....+++|||+++|+|.+++..... ...+++.++..++.|++.||+|||+. +++||||||+||+
T Consensus 93 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~Nil 169 (304)
T cd05101 93 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQ---KCIHRDLAARNVL 169 (304)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHC---CeeecccccceEE
Confidence 9999999999999999999864321 23578899999999999999999999 9999999999999
Q ss_pred ECCCCceeecccccccccCCCCCce-eeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCccHHHH
Q 002278 751 IDENFDAHLSDFGIARCIPTAMPHA-STFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQL 828 (943)
Q Consensus 751 l~~~~~~kl~DFGla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~p~~~~~~~~~~ 828 (943)
+++++.+||+|||+++......... .....+++.|+|||++.+..++.++||||||+++|||++ |..||..... ..+
T Consensus 170 i~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~-~~~ 248 (304)
T cd05101 170 VTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV-EEL 248 (304)
T ss_pred EcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCH-HHH
Confidence 9999999999999998764332221 122235678999999998889999999999999999998 7888875543 233
Q ss_pred HHHhccccccccccCcccccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcCC
Q 002278 829 IMSKADDNTVMEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLVSLLP 889 (943)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~~~~ 889 (943)
.......... .... .....+.+++.+||+.+|++||++.++++.|..+..
T Consensus 249 ~~~~~~~~~~------~~~~-----~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~ 298 (304)
T cd05101 249 FKLLKEGHRM------DKPA-----NCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILT 298 (304)
T ss_pred HHHHHcCCcC------CCCC-----CCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHH
Confidence 2222211111 0110 122567789999999999999999999999987654
No 214
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=9e-35 Score=316.41 Aligned_cols=255 Identities=22% Similarity=0.282 Sum_probs=204.8
Q ss_pred hhccccceEEeeeceEEEEEEEecC-CceEEEEEecccCcccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEE
Q 002278 615 TENLSEKYIVGYGASSTVYKCALKN-SRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDY 693 (943)
Q Consensus 615 ~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 693 (943)
.+.|++.+.||+|+||.||+|.... ++.||+|.+........+.+.+|+++++.++||||+++++++..+...++||||
T Consensus 11 ~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 90 (292)
T cd06644 11 NEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEF 90 (292)
T ss_pred chhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEec
Confidence 3678899999999999999999764 788999998766555667788999999999999999999999999999999999
Q ss_pred ccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCC
Q 002278 694 MVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMP 773 (943)
Q Consensus 694 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~ 773 (943)
+++++|..++.. ....+++..+..++.|++.|++|||+. +++||||||+||+++.++.++|+|||++.......
T Consensus 91 ~~~~~l~~~~~~--~~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~- 164 (292)
T cd06644 91 CPGGAVDAIMLE--LDRGLTEPQIQVICRQMLEALQYLHSM---KIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTL- 164 (292)
T ss_pred CCCCcHHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHhcC---CeeecCCCcceEEEcCCCCEEEccCccceeccccc-
Confidence 999999887753 234589999999999999999999998 99999999999999999999999999987543322
Q ss_pred ceeeeEecccceeCccccc-----cCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCccccc
Q 002278 774 HASTFVLGTIGYIDPEYAH-----TSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSV 848 (943)
Q Consensus 774 ~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 848 (943)
.......+++.|+|||++. ...++.++|||||||++|||++|+.||................. +....
T Consensus 165 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~-------~~~~~ 237 (292)
T cd06644 165 QRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEP-------PTLSQ 237 (292)
T ss_pred cccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHHHhcCCC-------ccCCC
Confidence 1223345889999999885 34568899999999999999999999976554332222211111 11100
Q ss_pred CccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 002278 849 TCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLV 885 (943)
Q Consensus 849 ~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~ 885 (943)
.......+.+++.+||+.+|++||++.+++++-+
T Consensus 238 ---~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~ 271 (292)
T cd06644 238 ---PSKWSMEFRDFLKTALDKHPETRPSAAQLLEHPF 271 (292)
T ss_pred ---CcccCHHHHHHHHHHhcCCcccCcCHHHHhcCcc
Confidence 0011245778999999999999999999988643
No 215
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=5e-35 Score=315.51 Aligned_cols=242 Identities=22% Similarity=0.267 Sum_probs=191.4
Q ss_pred EeeeceEEEEEEEec-CCceEEEEEecccC---cccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEEccCCCh
Q 002278 624 VGYGASSTVYKCALK-NSRPIAVKKLYNQY---PHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSL 699 (943)
Q Consensus 624 lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 699 (943)
||+|+||.||++..+ +++.||+|++.... ......+..|++++++++||||+++++++..+...++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 699999999999976 58899999986432 12234456799999999999999999999999999999999999999
Q ss_pred hhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCCceeeeE
Q 002278 700 WDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFV 779 (943)
Q Consensus 700 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~~ 779 (943)
.+++... ....+++..+..++.|++.|++|||+. +|+||||||+||+++.++.++|+|||++....... .....
T Consensus 81 ~~~~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~--~~~~~ 154 (277)
T cd05607 81 KYHIYNV-GERGLEMERVIHYSAQITCGILHLHSM---DIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGK--TITQR 154 (277)
T ss_pred HHHHHhc-cccCCCHHHHHHHHHHHHHHHHHHHHC---CEEEccCChHhEEEcCCCCEEEeeceeeeecCCCc--eeecc
Confidence 9887532 233588999999999999999999999 99999999999999999999999999998764432 22234
Q ss_pred ecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccH---HHHHHHhccccccccccCcccccCccCHHHH
Q 002278 780 LGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNL---HQLIMSKADDNTVMEAVDPEVSVTCVDLSAV 856 (943)
Q Consensus 780 ~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 856 (943)
.|+..|+|||++.+..++.++||||+||++|||++|+.||...... .......... ... ... ....
T Consensus 155 ~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~-----~~~--~~~----~~~~ 223 (277)
T cd05607 155 AGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLED-----EVK--FEH----QNFT 223 (277)
T ss_pred CCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhcc-----ccc--ccc----ccCC
Confidence 5899999999999988999999999999999999999999754321 1111111110 000 000 0112
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHH
Q 002278 857 RKTFQLALLCTKRYPSERPTMQEVAR 882 (943)
Q Consensus 857 ~~l~~l~~~cl~~dP~~RPt~~el~~ 882 (943)
..+.+++..|++.||++||++.|+++
T Consensus 224 ~~~~~li~~~L~~~P~~R~~~~~~~~ 249 (277)
T cd05607 224 EESKDICRLFLAKKPEDRLGSREKND 249 (277)
T ss_pred HHHHHHHHHHhccCHhhCCCCccchh
Confidence 45679999999999999999966553
No 216
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=4.1e-35 Score=320.53 Aligned_cols=264 Identities=21% Similarity=0.261 Sum_probs=202.9
Q ss_pred hhccccceEEeeeceEEEEEEEec-CCceEEEEEecccC-cccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEE
Q 002278 615 TENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQY-PHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYD 692 (943)
Q Consensus 615 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 692 (943)
.++|...+.||+|+||.||+|..+ +++.||+|.+.... ......+.+|+++++.++||||+++++++..+...++|||
T Consensus 5 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e 84 (301)
T cd07873 5 LETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFE 84 (301)
T ss_pred ccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEe
Confidence 357889999999999999999976 57889999886433 3334567789999999999999999999999999999999
Q ss_pred EccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCC
Q 002278 693 YMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAM 772 (943)
Q Consensus 693 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~ 772 (943)
|++ ++|.+++.. ....+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||++.......
T Consensus 85 ~~~-~~l~~~l~~--~~~~~~~~~~~~~~~qi~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~ 158 (301)
T cd07873 85 YLD-KDLKQYLDD--CGNSINMHNVKLFLFQLLRGLNYCHRR---KVLHRDLKPQNLLINERGELKLADFGLARAKSIPT 158 (301)
T ss_pred ccc-cCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHHHEEECCCCcEEECcCcchhccCCCC
Confidence 996 588888763 234588999999999999999999999 99999999999999999999999999997653322
Q ss_pred CceeeeEecccceeCcccccc-CCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccC--------
Q 002278 773 PHASTFVLGTIGYIDPEYAHT-SRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVD-------- 843 (943)
Q Consensus 773 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~-------- 843 (943)
.. .....+++.|+|||++.+ ..++.++|||||||++|||+||++||...+....+..............+
T Consensus 159 ~~-~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (301)
T cd07873 159 KT-YSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEE 237 (301)
T ss_pred Cc-ccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhcccc
Confidence 11 122347889999998865 45788999999999999999999999876544333222211111111110
Q ss_pred ------cccccCcc---CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 002278 844 ------PEVSVTCV---DLSAVRKTFQLALLCTKRYPSERPTMQEVARVLV 885 (943)
Q Consensus 844 ------~~~~~~~~---~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~ 885 (943)
+.....+. .......+.+++.+|++.||.+|||++|+++|-+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~ 288 (301)
T cd07873 238 FKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPY 288 (301)
T ss_pred ccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCcc
Confidence 11100000 0011245678999999999999999999998754
No 217
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=1.9e-35 Score=329.41 Aligned_cols=261 Identities=24% Similarity=0.264 Sum_probs=200.1
Q ss_pred HHhhccccceEEeeeceEEEEEEEec-CCceEEEEEecccCc--ccHHHHHHHHHHHhcCCCCCcceeeeEEecC-----
Q 002278 613 RSTENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQYP--HNLREFETELETIGSIRHRNIVSLHGYALSP----- 684 (943)
Q Consensus 613 ~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~----- 684 (943)
...++|+..+.||+|+||+||+|... +++.||||++..... ...+.+.+|+++++.++||||+++++++...
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07878 12 EVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIEN 91 (343)
T ss_pred hhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccc
Confidence 35678999999999999999999975 578899999865322 2345677899999999999999999987543
Q ss_pred -CcceEEEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccc
Q 002278 685 -YGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFG 763 (943)
Q Consensus 685 -~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFG 763 (943)
...+++++++ +++|.+++. ...+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||
T Consensus 92 ~~~~~~~~~~~-~~~l~~~~~----~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Dfg 163 (343)
T cd07878 92 FNEVYLVTNLM-GADLNNIVK----CQKLSDEHVQFLIYQLLRGLKYIHSA---GIIHRDLKPSNVAVNEDCELRILDFG 163 (343)
T ss_pred cCcEEEEeecC-CCCHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecccCChhhEEECCCCCEEEcCCc
Confidence 3458889987 889988874 34689999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCceeeeEecccceeCcccccc-CCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhcccccccccc
Q 002278 764 IARCIPTAMPHASTFVLGTIGYIDPEYAHT-SRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAV 842 (943)
Q Consensus 764 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 842 (943)
+++..... .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||.+..............+......
T Consensus 164 ~~~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 239 (343)
T cd07878 164 LARQADDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEV 239 (343)
T ss_pred cceecCCC----cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHH
Confidence 99865432 123458999999999877 5689999999999999999999999986654433332221111110000
Q ss_pred C---------------cccccCcc---CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 002278 843 D---------------PEVSVTCV---DLSAVRKTFQLALLCTKRYPSERPTMQEVARVLV 885 (943)
Q Consensus 843 ~---------------~~~~~~~~---~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~ 885 (943)
. +....... .......+.+++.+|++.||++|||+.|+++|-+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp~ 300 (343)
T cd07878 240 LKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAHPY 300 (343)
T ss_pred HHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcc
Confidence 0 00000000 0001134678999999999999999999999854
No 218
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=4.7e-35 Score=315.27 Aligned_cols=254 Identities=24% Similarity=0.341 Sum_probs=202.0
Q ss_pred HHhhccccceEEeeeceEEEEEEEec-CCceEEEEEecccCcccHHHHHHHHHHHhcC-CCCCcceeeeEEecC------
Q 002278 613 RSTENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQYPHNLREFETELETIGSI-RHRNIVSLHGYALSP------ 684 (943)
Q Consensus 613 ~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~------ 684 (943)
.+.+.|+..+.||+|+||.||+|... .++.||+|.+... ......+.+|+.+++++ +||||+++++++...
T Consensus 3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~-~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (272)
T cd06637 3 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVT-GDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMD 81 (272)
T ss_pred ChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcC-CccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCC
Confidence 35677888899999999999999976 4678899988543 34456788999999998 699999999998753
Q ss_pred CcceEEEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeeccccc
Q 002278 685 YGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGI 764 (943)
Q Consensus 685 ~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGl 764 (943)
...+++|||+++|+|.+++... ....+++..+..++.|++.|++|||++ +|+||||||+||++++++.++|+|||+
T Consensus 82 ~~~~iv~e~~~~~~L~~~l~~~-~~~~l~~~~~~~~~~qi~~~l~~LH~~---~ivh~dl~~~nili~~~~~~~l~Dfg~ 157 (272)
T cd06637 82 DQLWLVMEFCGAGSVTDLIKNT-KGNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGV 157 (272)
T ss_pred cEEEEEEEcCCCCcHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHEEECCCCCEEEccCCC
Confidence 3478999999999999998742 234689999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCceeeeEecccceeCccccc-----cCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccc
Q 002278 765 ARCIPTAMPHASTFVLGTIGYIDPEYAH-----TSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVM 839 (943)
Q Consensus 765 a~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~ 839 (943)
++....... ......|+..|+|||++. +..++.++||||+||++|||++|+.||............... ...
T Consensus 158 ~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~~~~--~~~ 234 (272)
T cd06637 158 SAQLDRTVG-RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRN--PAP 234 (272)
T ss_pred ceecccccc-cCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhcC--CCC
Confidence 986543322 223345899999999886 345788999999999999999999999765544333322111 111
Q ss_pred cccCcccccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002278 840 EAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARV 883 (943)
Q Consensus 840 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~ 883 (943)
..... .....+.+++.+||..+|.+|||+.+++++
T Consensus 235 ~~~~~---------~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 269 (272)
T cd06637 235 RLKSK---------KWSKKFQSFIESCLVKNHSQRPTTEQLMKH 269 (272)
T ss_pred CCCCC---------CcCHHHHHHHHHHcCCChhhCCCHHHHhhC
Confidence 11111 112467789999999999999999999886
No 219
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=7.4e-35 Score=317.65 Aligned_cols=262 Identities=24% Similarity=0.362 Sum_probs=201.2
Q ss_pred hhccccceEEeeeceEEEEEEEecC-----------------CceEEEEEecccC-cccHHHHHHHHHHHhcCCCCCcce
Q 002278 615 TENLSEKYIVGYGASSTVYKCALKN-----------------SRPIAVKKLYNQY-PHNLREFETELETIGSIRHRNIVS 676 (943)
Q Consensus 615 ~~~~~~~~~lG~G~~g~Vy~~~~~~-----------------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~ 676 (943)
.++|+..+.||+|+||.||+|...+ ...||+|++.... ......+.+|+++++.++||||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~ 83 (296)
T cd05095 4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIR 83 (296)
T ss_pred hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcce
Confidence 3578999999999999999986432 3468999886543 334467889999999999999999
Q ss_pred eeeEEecCCcceEEEEEccCCChhhhccCCC--------CCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCcc
Q 002278 677 LHGYALSPYGNLLFYDYMVNGSLWDLLHGPS--------KKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSN 748 (943)
Q Consensus 677 l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~--------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~N 748 (943)
+++++..++..+++|||+++|+|.+++.... ....+++.++..++.|++.|++|||+. +++||||||+|
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dlkp~N 160 (296)
T cd05095 84 LLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSL---NFVHRDLATRN 160 (296)
T ss_pred EEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CeecccCChhe
Confidence 9999999999999999999999999986422 113477889999999999999999999 99999999999
Q ss_pred EEECCCCceeecccccccccCCCCCce-eeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHh--CCCCCCCCccH
Q 002278 749 ILIDENFDAHLSDFGIARCIPTAMPHA-STFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT--GKKAVDNESNL 825 (943)
Q Consensus 749 ill~~~~~~kl~DFGla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt--G~~p~~~~~~~ 825 (943)
|++++++.++|+|||+++.+....... .....++..|+|||...++.++.++|||||||++|||++ |..||......
T Consensus 161 ili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~ 240 (296)
T cd05095 161 CLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDE 240 (296)
T ss_pred EEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChH
Confidence 999999999999999998654332111 112234678999999888889999999999999999998 77888754433
Q ss_pred HHHHHHhccc-cccccccCcccccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 002278 826 HQLIMSKADD-NTVMEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLV 885 (943)
Q Consensus 826 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~ 885 (943)
.......... ........+. .. .....+.+++.+||+.||++||++.++.+.|+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~-~~-----~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~ 295 (296)
T cd05095 241 QVIENTGEFFRDQGRQVYLPK-PA-----LCPDSLYKLMLSCWRRNAKERPSFQEIHATLL 295 (296)
T ss_pred HHHHHHHHHHhhccccccCCC-CC-----CCCHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 2221110000 0000000010 00 11256789999999999999999999999875
No 220
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=2.2e-35 Score=341.69 Aligned_cols=264 Identities=19% Similarity=0.215 Sum_probs=198.6
Q ss_pred HHHHHhhccccceEEeeeceEEEEEEEec-CCceEEEEEecccCcccHHHHHHHHHHHhcCCC------CCcceeeeEEe
Q 002278 610 DIMRSTENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQYPHNLREFETELETIGSIRH------RNIVSLHGYAL 682 (943)
Q Consensus 610 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h------~niv~l~~~~~ 682 (943)
++....++|++.+.||+|+||+||+|.+. .++.||||++... .........|+++++.++| ++++.+++++.
T Consensus 123 ~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~ 201 (467)
T PTZ00284 123 DIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNV-PKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQ 201 (467)
T ss_pred ccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecc-hhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEE
Confidence 34445788999999999999999999976 4678999998643 2233455667777776654 45889999887
Q ss_pred cC-CcceEEEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhh-CCCCCeEecCCCCccEEECCCC-----
Q 002278 683 SP-YGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHH-DCNPRIIHRDVKSSNILIDENF----- 755 (943)
Q Consensus 683 ~~-~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~ivH~Dlkp~Nill~~~~----- 755 (943)
.. ...++|||++ +++|.+++. ....+++..+..++.||+.||+|||+ . +||||||||+|||++.++
T Consensus 202 ~~~~~~~iv~~~~-g~~l~~~l~---~~~~l~~~~~~~i~~qi~~aL~yLH~~~---gIiHrDlKP~NILl~~~~~~~~~ 274 (467)
T PTZ00284 202 NETGHMCIVMPKY-GPCLLDWIM---KHGPFSHRHLAQIIFQTGVALDYFHTEL---HLMHTDLKPENILMETSDTVVDP 274 (467)
T ss_pred cCCceEEEEEecc-CCCHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEEecCCccccc
Confidence 65 4578888887 788988886 34568999999999999999999997 5 999999999999998665
Q ss_pred -----------ceeecccccccccCCCCCceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCcc
Q 002278 756 -----------DAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESN 824 (943)
Q Consensus 756 -----------~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~ 824 (943)
.+||+|||.+..... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.+...
T Consensus 275 ~~~~~~~~~~~~vkl~DfG~~~~~~~----~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~ 350 (467)
T PTZ00284 275 VTNRALPPDPCRVRICDLGGCCDERH----SRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDN 350 (467)
T ss_pred ccccccCCCCceEEECCCCccccCcc----ccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh
Confidence 499999998864322 22345699999999999999999999999999999999999999987766
Q ss_pred HHHHHHHhccccccccccC-------------------ccccc----------CccCHHHHHHHHHHHHHccCCCCCCCC
Q 002278 825 LHQLIMSKADDNTVMEAVD-------------------PEVSV----------TCVDLSAVRKTFQLALLCTKRYPSERP 875 (943)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~-------------------~~~~~----------~~~~~~~~~~l~~l~~~cl~~dP~~RP 875 (943)
...+.......+.++..+. +.... ..........+.+++..||+.||++||
T Consensus 351 ~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ 430 (467)
T PTZ00284 351 LEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRL 430 (467)
T ss_pred HHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCC
Confidence 5444333222221111100 00000 000001124567999999999999999
Q ss_pred CHHHHHHHHh
Q 002278 876 TMQEVARVLV 885 (943)
Q Consensus 876 t~~el~~~L~ 885 (943)
|+.|+++|-+
T Consensus 431 ta~e~L~Hp~ 440 (467)
T PTZ00284 431 NARQMTTHPY 440 (467)
T ss_pred CHHHHhcCcc
Confidence 9999999855
No 221
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=7.1e-35 Score=313.07 Aligned_cols=254 Identities=23% Similarity=0.369 Sum_probs=200.8
Q ss_pred HhhccccceEEeeeceEEEEEEEec-CCceEEEEEecccCcccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEE
Q 002278 614 STENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYD 692 (943)
Q Consensus 614 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 692 (943)
+++++.....||+|+||.||+|.+. ++..||+|.+........+.+.+|+++++.++|+||+++++++..++..++++|
T Consensus 6 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 85 (268)
T cd06624 6 EYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFME 85 (268)
T ss_pred ccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEEEe
Confidence 4566666778999999999999966 467899998876655566789999999999999999999999999999999999
Q ss_pred EccCCChhhhccCCCCCccC--CHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECC-CCceeecccccccccC
Q 002278 693 YMVNGSLWDLLHGPSKKVKL--DWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDE-NFDAHLSDFGIARCIP 769 (943)
Q Consensus 693 ~~~~g~L~~~l~~~~~~~~l--~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~-~~~~kl~DFGla~~~~ 769 (943)
|+++++|.+++... ...+ ++..+..++.|++.|++|||+. +|+||||||+||+++. ++.++|+|||.+....
T Consensus 86 ~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~ 160 (268)
T cd06624 86 QVPGGSLSALLRSK--WGPLKDNEQTIIFYTKQILEGLKYLHDN---QIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLA 160 (268)
T ss_pred cCCCCCHHHHHHHh--cccCCCcHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCeEEEecchhheecc
Confidence 99999999998632 1234 7888899999999999999999 9999999999999976 6799999999997654
Q ss_pred CCCCceeeeEecccceeCccccccCC--CCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccc
Q 002278 770 TAMPHASTFVLGTIGYIDPEYAHTSR--LNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVS 847 (943)
Q Consensus 770 ~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 847 (943)
..... .....|++.|+|||++.+.. ++.++||||+|+++|+|++|+.||............... . ...+.++
T Consensus 161 ~~~~~-~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~~-~----~~~~~~~ 234 (268)
T cd06624 161 GINPC-TETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGM-F----KIHPEIP 234 (268)
T ss_pred cCCCc-cccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhhhh-h----ccCCCCC
Confidence 32221 22234789999999987643 788999999999999999999999754332211111100 0 0111111
Q ss_pred cCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002278 848 VTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARV 883 (943)
Q Consensus 848 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~ 883 (943)
. .....+.+++.+||+.+|++|||+.+++++
T Consensus 235 ~-----~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 265 (268)
T cd06624 235 E-----SLSAEAKNFILRCFEPDPDKRASAHDLLQD 265 (268)
T ss_pred c-----ccCHHHHHHHHHHcCCCchhCCCHHHHHhC
Confidence 1 112457789999999999999999999887
No 222
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=4.8e-35 Score=317.99 Aligned_cols=260 Identities=24% Similarity=0.223 Sum_probs=195.1
Q ss_pred ccccceEEeeeceEEEEEEEec-CCceEEEEEecccC--cccHHHHHHHHHHHhcC---CCCCcceeeeEEecC-----C
Q 002278 617 NLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQY--PHNLREFETELETIGSI---RHRNIVSLHGYALSP-----Y 685 (943)
Q Consensus 617 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~~-----~ 685 (943)
+|+..+.||+|+||+||+|.++ +++.||+|.+.... ......+.+|+++++.+ +||||+++++++... .
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 4788899999999999999976 57889999886432 22234556677776655 699999999998643 3
Q ss_pred cceEEEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccc
Q 002278 686 GNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIA 765 (943)
Q Consensus 686 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla 765 (943)
..+++|||++ ++|.+++... ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 81 ~~~lv~e~~~-~~l~~~~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~kl~dfg~~ 155 (288)
T cd07863 81 KVTLVFEHVD-QDLRTYLDKV-PPPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGQVKLADFGLA 155 (288)
T ss_pred eEEEEEcccc-cCHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccCcc
Confidence 4689999997 5888887643 234589999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccc-----ccc
Q 002278 766 RCIPTAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNT-----VME 840 (943)
Q Consensus 766 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~-----~~~ 840 (943)
+....... .....|+..|+|||++.+..++.++||||+||++|||++|++||.................. ...
T Consensus 156 ~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (288)
T cd07863 156 RIYSCQMA--LTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPR 233 (288)
T ss_pred ccccCccc--CCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCcc
Confidence 87643321 22345899999999999999999999999999999999999999766544333222211100 000
Q ss_pred c-------cCcccccCc--cCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002278 841 A-------VDPEVSVTC--VDLSAVRKTFQLALLCTKRYPSERPTMQEVARV 883 (943)
Q Consensus 841 ~-------~~~~~~~~~--~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~ 883 (943)
. ..+...... ........+.+++.+|++.||++|||+.+++.|
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~h 285 (288)
T cd07863 234 DVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQH 285 (288)
T ss_pred cccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 0 000000000 000122456789999999999999999999876
No 223
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=4.6e-35 Score=321.01 Aligned_cols=261 Identities=24% Similarity=0.372 Sum_probs=205.8
Q ss_pred hhccccceEEeeeceEEEEEEEecC--------CceEEEEEecccC-cccHHHHHHHHHHHhcC-CCCCcceeeeEEecC
Q 002278 615 TENLSEKYIVGYGASSTVYKCALKN--------SRPIAVKKLYNQY-PHNLREFETELETIGSI-RHRNIVSLHGYALSP 684 (943)
Q Consensus 615 ~~~~~~~~~lG~G~~g~Vy~~~~~~--------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 684 (943)
.++|.+.+.||+|+||.||+|.... ...+|+|.+.... .....++.+|+++++.+ +||||+++++++...
T Consensus 17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~ 96 (307)
T cd05098 17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 96 (307)
T ss_pred hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecC
Confidence 4678999999999999999998532 2469999886542 23445688899999999 799999999999999
Q ss_pred CcceEEEEEccCCChhhhccCCCC-------------CccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEE
Q 002278 685 YGNLLFYDYMVNGSLWDLLHGPSK-------------KVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILI 751 (943)
Q Consensus 685 ~~~~lv~e~~~~g~L~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill 751 (943)
+..++||||+++|+|.+++..... ...+++.+++.++.|++.||+|||+. +++||||||+||++
T Consensus 97 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~Nill 173 (307)
T cd05098 97 GPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLV 173 (307)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHHheEE
Confidence 999999999999999999964321 23588999999999999999999998 99999999999999
Q ss_pred CCCCceeecccccccccCCCCCce-eeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCccHHHHH
Q 002278 752 DENFDAHLSDFGIARCIPTAMPHA-STFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLI 829 (943)
Q Consensus 752 ~~~~~~kl~DFGla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~p~~~~~~~~~~~ 829 (943)
+.++.+||+|||.++......... .....+++.|+|||++.+..++.++|||||||++|||++ |..||.... .....
T Consensus 174 ~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~-~~~~~ 252 (307)
T cd05098 174 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP-VEELF 252 (307)
T ss_pred cCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCC-HHHHH
Confidence 999999999999997654321111 111224568999999998889999999999999999998 888886543 33333
Q ss_pred HHhccccccccccCcccccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcCCC
Q 002278 830 MSKADDNTVMEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLVSLLPA 890 (943)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~~~~~ 890 (943)
........ ...+. .....+.+++..|++.+|++||++.++++.|..+.+.
T Consensus 253 ~~~~~~~~------~~~~~-----~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~ 302 (307)
T cd05098 253 KLLKEGHR------MDKPS-----NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILAL 302 (307)
T ss_pred HHHHcCCC------CCCCC-----cCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHH
Confidence 32222111 01110 1124677899999999999999999999999876543
No 224
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=1.4e-34 Score=311.99 Aligned_cols=256 Identities=23% Similarity=0.350 Sum_probs=204.0
Q ss_pred hccccceEEeeeceEEEEEEEecC------CceEEEEEecccCcc-cHHHHHHHHHHHhcCCCCCcceeeeEEecCCcce
Q 002278 616 ENLSEKYIVGYGASSTVYKCALKN------SRPIAVKKLYNQYPH-NLREFETELETIGSIRHRNIVSLHGYALSPYGNL 688 (943)
Q Consensus 616 ~~~~~~~~lG~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 688 (943)
++|+....||+|+||.||+|+.+. .+.||+|.+...... ..+.+.+|++++++++||||+++++++.+.+..+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 84 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY 84 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce
Confidence 578889999999999999999652 456888887654333 3567899999999999999999999999988999
Q ss_pred EEEEEccCCChhhhccCCCCC------ccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeeccc
Q 002278 689 LFYDYMVNGSLWDLLHGPSKK------VKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDF 762 (943)
Q Consensus 689 lv~e~~~~g~L~~~l~~~~~~------~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DF 762 (943)
+||||+++|+|.+++...... ..+++..+..++.|++.||+|||+. +|+||||||+||++++++.++++||
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~~~ 161 (275)
T cd05046 85 MILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNA---RFVHRDLAARNCLVSSQREVKVSLL 161 (275)
T ss_pred EEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhc---CcccCcCccceEEEeCCCcEEEccc
Confidence 999999999999998643311 2689999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCCCceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCccHHHHHHHhccccccccc
Q 002278 763 GIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKADDNTVMEA 841 (943)
Q Consensus 763 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~ 841 (943)
|+++..............++..|+|||.+.+..++.++||||||+++|+|++ |..||.................. ..
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~~~~~~~~--~~ 239 (275)
T cd05046 162 SLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQAGKLE--LP 239 (275)
T ss_pred ccccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHHHHHHHHcCCcC--CC
Confidence 9987553322222223346788999999988889999999999999999999 88898754433222221111111 10
Q ss_pred cCcccccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 002278 842 VDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLV 885 (943)
Q Consensus 842 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~ 885 (943)
... .....+.+++.+|++.+|++||++.++++.+.
T Consensus 240 ~~~---------~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 240 VPE---------GCPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred CCC---------CCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 111 11246788999999999999999999999875
No 225
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=3.7e-35 Score=317.97 Aligned_cols=262 Identities=25% Similarity=0.395 Sum_probs=198.9
Q ss_pred cccceEEeeeceEEEEEEEe-----cCCceEEEEEecccC-cccHHHHHHHHHHHhcCCCCCcceeeeEEecC--CcceE
Q 002278 618 LSEKYIVGYGASSTVYKCAL-----KNSRPIAVKKLYNQY-PHNLREFETELETIGSIRHRNIVSLHGYALSP--YGNLL 689 (943)
Q Consensus 618 ~~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~l 689 (943)
|+..+.||+|+||+||.+.. .+++.||+|.+.... ....+.+.+|+++++.++||||+++++++... ...++
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (283)
T cd05080 6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQL 85 (283)
T ss_pred ceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEE
Confidence 37889999999999988653 246789999886543 23456788999999999999999999988654 35789
Q ss_pred EEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccC
Q 002278 690 FYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIP 769 (943)
Q Consensus 690 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~ 769 (943)
+|||+++|+|.+++.. ..+++.++..++.|++.|++|||+. +|+||||||+||++++++.++|+|||+++...
T Consensus 86 v~e~~~~~~l~~~~~~----~~l~~~~~~~i~~~l~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~ 158 (283)
T cd05080 86 IMEYVPLGSLRDYLPK----HKLNLAQLLLFAQQICEGMAYLHSQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVP 158 (283)
T ss_pred EecCCCCCCHHHHHHH----cCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccChheEEEcCCCcEEEeecccccccC
Confidence 9999999999999852 3589999999999999999999999 99999999999999999999999999998764
Q ss_pred CCCCce--eeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccH-HHHHHHhccc---cccccccC
Q 002278 770 TAMPHA--STFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNL-HQLIMSKADD---NTVMEAVD 843 (943)
Q Consensus 770 ~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~-~~~~~~~~~~---~~~~~~~~ 843 (943)
...... .....++..|+|||...+..++.++||||||+++|||+||+.||...... .......... ....+...
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (283)
T cd05080 159 EGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLE 238 (283)
T ss_pred CcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhhhh
Confidence 332111 11123566799999999888999999999999999999999998643321 1111000000 00000000
Q ss_pred cccccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhc
Q 002278 844 PEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLVSL 887 (943)
Q Consensus 844 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~~ 887 (943)
....... .......+.+++..||+.+|++|||++++++.|+.+
T Consensus 239 ~~~~~~~-~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~ 281 (283)
T cd05080 239 RGMRLPC-PKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEM 281 (283)
T ss_pred cCCCCCC-CCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHh
Confidence 0000000 011235788999999999999999999999998865
No 226
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=1.4e-34 Score=308.61 Aligned_cols=248 Identities=24% Similarity=0.351 Sum_probs=197.5
Q ss_pred eEEeeeceEEEEEEEecC----CceEEEEEecccCc-ccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEEccC
Q 002278 622 YIVGYGASSTVYKCALKN----SRPIAVKKLYNQYP-HNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVN 696 (943)
Q Consensus 622 ~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 696 (943)
+.||+|+||.||+|.... +..+|+|.+..... ...+++.+|+++++.+.||||+++++++. ....++||||+++
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~ 79 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPL 79 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCC
Confidence 368999999999998542 26799998875543 34567889999999999999999999876 4567999999999
Q ss_pred CChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCCcee
Q 002278 697 GSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHAS 776 (943)
Q Consensus 697 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~~~~ 776 (943)
|+|.+++.. ...+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||+++..........
T Consensus 80 ~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~ 153 (257)
T cd05060 80 GPLLKYLKK---RREIPVSDLKELAHQVAMGMAYLESK---HFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYR 153 (257)
T ss_pred CcHHHHHHh---CCCCCHHHHHHHHHHHHHHHHHHhhc---CeeccCcccceEEEcCCCcEEeccccccceeecCCcccc
Confidence 999999973 33689999999999999999999998 999999999999999999999999999987644322211
Q ss_pred --eeEecccceeCccccccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCccHHHHHHHhccccccccccCcccccCccCH
Q 002278 777 --TFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDL 853 (943)
Q Consensus 777 --~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 853 (943)
....++..|+|||...+..++.++|||||||++|||++ |+.||............. ..... ....
T Consensus 154 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~-~~~~~--~~~~--------- 221 (257)
T cd05060 154 ATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLE-SGERL--PRPE--------- 221 (257)
T ss_pred cccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHH-cCCcC--CCCC---------
Confidence 11223568999999998899999999999999999998 999998665433222221 11110 0111
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcC
Q 002278 854 SAVRKTFQLALLCTKRYPSERPTMQEVARVLVSLL 888 (943)
Q Consensus 854 ~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~~~ 888 (943)
.....+.+++.+|+..+|++||++.++++.|+.+.
T Consensus 222 ~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~~ 256 (257)
T cd05060 222 ECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRDP 256 (257)
T ss_pred CCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhcc
Confidence 11246779999999999999999999999998653
No 227
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=1.4e-34 Score=308.46 Aligned_cols=251 Identities=23% Similarity=0.320 Sum_probs=206.4
Q ss_pred ccccceEEeeeceEEEEEEEec-CCceEEEEEecccC--cccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEE
Q 002278 617 NLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQY--PHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDY 693 (943)
Q Consensus 617 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 693 (943)
+|+..+.||+|+||.||.++.. +++.+++|++.... .....++.+|++++++++|+||+++++++.+.+..+++|||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~ 80 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY 80 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence 4788899999999999999865 57889999875432 44456788999999999999999999999999999999999
Q ss_pred ccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCC
Q 002278 694 MVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMP 773 (943)
Q Consensus 694 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~ 773 (943)
+++|+|.+++.... ...+++.++..++.|++.|++|||+. +++||||+|+||++++++.+||+|||.+........
T Consensus 81 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~ 156 (256)
T cd08221 81 ANGGTLYDKIVRQK-GQLFEEEMVLWYLFQIVSAVSYIHKA---GILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYS 156 (256)
T ss_pred cCCCcHHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChHhEEEeCCCCEEECcCcceEEcccccc
Confidence 99999999987432 35689999999999999999999998 999999999999999999999999999987644432
Q ss_pred ceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccccCccCH
Q 002278 774 HASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDL 853 (943)
Q Consensus 774 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 853 (943)
......|++.|+|||...+..++.++||||||+++|||++|+.||.................. . ..+
T Consensus 157 -~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~--~-~~~--------- 223 (256)
T cd08221 157 -MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQGNYT--P-VVS--------- 223 (256)
T ss_pred -cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCC--C-Ccc---------
Confidence 222345899999999999888999999999999999999999999865544333332221111 1 011
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 002278 854 SAVRKTFQLALLCTKRYPSERPTMQEVARVL 884 (943)
Q Consensus 854 ~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L 884 (943)
.....+.+++..|+..+|++||++.++++++
T Consensus 224 ~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~ 254 (256)
T cd08221 224 VYSSELISLVHSLLQQDPEKRPTADEVLDQP 254 (256)
T ss_pred ccCHHHHHHHHHHcccCcccCCCHHHHhhCc
Confidence 1124677899999999999999999999874
No 228
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=1.2e-34 Score=314.24 Aligned_cols=264 Identities=27% Similarity=0.425 Sum_probs=201.1
Q ss_pred hccccceEEeeeceEEEEEEEec-----CCceEEEEEecccCcccHHHHHHHHHHHhcCCCCCcceeeeEEecC--Ccce
Q 002278 616 ENLSEKYIVGYGASSTVYKCALK-----NSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYALSP--YGNL 688 (943)
Q Consensus 616 ~~~~~~~~lG~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~ 688 (943)
..|+..+.||+|+||+||+|..+ .++.||+|++........+.+.+|+++++.++||||+++++++... ...+
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 83 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLR 83 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceE
Confidence 46788899999999999999743 4788999998766555567889999999999999999999987543 4578
Q ss_pred EEEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeeccccccccc
Q 002278 689 LFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCI 768 (943)
Q Consensus 689 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~ 768 (943)
+||||+++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++..
T Consensus 84 lv~e~~~~~~L~~~l~~~--~~~l~~~~~~~~~~~l~~aL~~LH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~~~~ 158 (284)
T cd05081 84 LVMEYLPYGSLRDYLQKH--RERLDHRKLLLYASQICKGMEYLGSK---RYVHRDLATRNILVESENRVKIGDFGLTKVL 158 (284)
T ss_pred EEEEecCCCCHHHHHHhc--CcCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHhhEEECCCCeEEECCCcccccc
Confidence 999999999999998632 34589999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCcee--eeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccc-------cc
Q 002278 769 PTAMPHAS--TFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNT-------VM 839 (943)
Q Consensus 769 ~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~-------~~ 839 (943)
........ ....++..|+|||+..+..++.++|||||||++|||++|..|+...... +......... ..
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 236 (284)
T cd05081 159 PQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAE--FMRMMGNDKQGQMIVYHLI 236 (284)
T ss_pred cCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchh--hhhhcccccccccchHHHH
Confidence 44322111 1112345699999999888999999999999999999988776533211 1111000000 00
Q ss_pred cccCcccccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhc
Q 002278 840 EAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLVSL 887 (943)
Q Consensus 840 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~~ 887 (943)
+......... ........+.+++.+||+.+|++|||+.++++.|+.+
T Consensus 237 ~~~~~~~~~~-~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 237 ELLKNNGRLP-APPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred HHHhcCCcCC-CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence 0000000000 0011224678999999999999999999999998764
No 229
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=1.7e-34 Score=307.89 Aligned_cols=250 Identities=25% Similarity=0.405 Sum_probs=205.4
Q ss_pred hhccccceEEeeeceEEEEEEEecCCceEEEEEecccCcccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEEc
Q 002278 615 TENLSEKYIVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYM 694 (943)
Q Consensus 615 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 694 (943)
.++|+..+.||+|+||.||+|... ++.||+|++..... ..+++.+|+.+++.++|+||+++++++.+.+..++||||+
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 82 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYM 82 (256)
T ss_pred hhhccceeeeecCCCceEEEEEec-CcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEec
Confidence 457888899999999999999876 78899999976543 4678899999999999999999999999988999999999
Q ss_pred cCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCCc
Q 002278 695 VNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPH 774 (943)
Q Consensus 695 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~~ 774 (943)
++++|.+++.... ...+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||.++.......
T Consensus 83 ~~~~L~~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~- 157 (256)
T cd05039 83 AKGSLVDYLRSRG-RAVITLAQQLGFALDVCEGMEYLEEK---NFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQD- 157 (256)
T ss_pred CCCcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CccchhcccceEEEeCCCCEEEcccccccccccccc-
Confidence 9999999986432 23689999999999999999999999 999999999999999999999999999987633221
Q ss_pred eeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCccHHHHHHHhccccccccccCcccccCccCH
Q 002278 775 ASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDL 853 (943)
Q Consensus 775 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 853 (943)
...++..|+|||++.+..++.++||||||+++||+++ |+.||....... .......... +....
T Consensus 158 ---~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~-~~~~~~~~~~------~~~~~----- 222 (256)
T cd05039 158 ---SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD-VVPHVEKGYR------MEAPE----- 222 (256)
T ss_pred ---cCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHH-HHHHHhcCCC------CCCcc-----
Confidence 2234678999999998889999999999999999997 999997654322 2222111111 11110
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhh
Q 002278 854 SAVRKTFQLALLCTKRYPSERPTMQEVARVLVS 886 (943)
Q Consensus 854 ~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~ 886 (943)
..+..+.+++.+|+..+|++||++.++++.|..
T Consensus 223 ~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 255 (256)
T cd05039 223 GCPPEVYKVMKDCWELDPAKRPTFKQLREQLAL 255 (256)
T ss_pred CCCHHHHHHHHHHhccChhhCcCHHHHHHHHhc
Confidence 112567899999999999999999999999864
No 230
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=1.3e-34 Score=311.22 Aligned_cols=252 Identities=20% Similarity=0.319 Sum_probs=192.1
Q ss_pred EEeeeceEEEEEEEecC---CceEEEEEecccCc-ccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEEccCCC
Q 002278 623 IVGYGASSTVYKCALKN---SRPIAVKKLYNQYP-HNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGS 698 (943)
Q Consensus 623 ~lG~G~~g~Vy~~~~~~---~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 698 (943)
.||+|+||.||+|...+ +..+|+|++..... .....+.+|+.++++++||||+++++++.+....++||||+++|+
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~ 81 (269)
T cd05087 2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLGD 81 (269)
T ss_pred cccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCCc
Confidence 58999999999998653 35789998865432 234578889999999999999999999999999999999999999
Q ss_pred hhhhccCCC--CCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCCce-
Q 002278 699 LWDLLHGPS--KKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHA- 775 (943)
Q Consensus 699 L~~~l~~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~~~- 775 (943)
|.+++.... .....++..+..++.|++.|++|||+. +++||||||+||+++.++.+|++|||.++.........
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~ 158 (269)
T cd05087 82 LKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKN---NFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYVT 158 (269)
T ss_pred HHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEECCccccccccCcceeec
Confidence 999986422 223467788889999999999999999 99999999999999999999999999997543322111
Q ss_pred eeeEecccceeCccccccC-------CCCCcchhhhHHHHHHHHHh-CCCCCCCCccHHHHHHHhccccccccccCcccc
Q 002278 776 STFVLGTIGYIDPEYAHTS-------RLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKADDNTVMEAVDPEVS 847 (943)
Q Consensus 776 ~~~~~gt~~y~aPE~~~~~-------~~~~~~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 847 (943)
.....|+..|+|||++.+. .++.++|||||||++|||++ |+.||................ ......+.+.
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 236 (269)
T cd05087 159 PDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQ--QLKLPKPRLK 236 (269)
T ss_pred CCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcc--cCCCCCCccC
Confidence 1223467889999988642 35789999999999999996 999997655443322211111 1111112221
Q ss_pred cCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 002278 848 VTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLV 885 (943)
Q Consensus 848 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~ 885 (943)
.. ....+.+++..|| .+|++|||+++|.+.|.
T Consensus 237 ~~-----~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 237 LP-----LSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred CC-----CChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 11 1235667899999 58999999999998763
No 231
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.2e-36 Score=295.92 Aligned_cols=250 Identities=21% Similarity=0.292 Sum_probs=208.3
Q ss_pred HhhccccceEEeeeceEEEEEEEec-CCceEEEEEecccCcc---cHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceE
Q 002278 614 STENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQYPH---NLREFETELETIGSIRHRNIVSLHGYALSPYGNLL 689 (943)
Q Consensus 614 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 689 (943)
..++|...+++|+|.||.|-.++.+ .++.+|+|++++..-- ..+.-..|-++++..+||.+..+.-.|+..+..++
T Consensus 166 Tm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCF 245 (516)
T KOG0690|consen 166 TMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCF 245 (516)
T ss_pred ccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEE
Confidence 4567888999999999999999977 5788999998766432 23345578999999999999999999999999999
Q ss_pred EEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccC
Q 002278 690 FYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIP 769 (943)
Q Consensus 690 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~ 769 (943)
||||+.||.|.-++. ....+++....-+...|+.||.|||++ +||+||+|.+|.|+|.+|++||+|||+++.--
T Consensus 246 VMeyanGGeLf~HLs---rer~FsE~RtRFYGaEIvsAL~YLHs~---~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I 319 (516)
T KOG0690|consen 246 VMEYANGGELFFHLS---RERVFSEDRTRFYGAEIVSALGYLHSR---NIVYRDLKLENLLLDKDGHIKITDFGLCKEEI 319 (516)
T ss_pred EEEEccCceEeeehh---hhhcccchhhhhhhHHHHHHhhhhhhC---CeeeeechhhhheeccCCceEeeecccchhcc
Confidence 999999999999987 345688888888999999999999999 99999999999999999999999999998532
Q ss_pred CCCCceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccccC
Q 002278 770 TAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVT 849 (943)
Q Consensus 770 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 849 (943)
. ........+|||.|.|||++....|+.++|.|.+||++|||++|+.||.+.+.-.....+...+-.++..+.|+
T Consensus 320 ~-~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~ed~kFPr~ls~e---- 394 (516)
T KOG0690|consen 320 K-YGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILMEDLKFPRTLSPE---- 394 (516)
T ss_pred c-ccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHHHHHHHhhhccCCccCCHH----
Confidence 2 23345567899999999999999999999999999999999999999997765444444444444554444332
Q ss_pred ccCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 002278 850 CVDLSAVRKTFQLALLCTKRYPSERP-----TMQEVARV 883 (943)
Q Consensus 850 ~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~el~~~ 883 (943)
...++...+.+||.+|- .+.|+.++
T Consensus 395 ---------AktLLsGLL~kdP~kRLGgGpdDakEi~~h 424 (516)
T KOG0690|consen 395 ---------AKTLLSGLLKKDPKKRLGGGPDDAKEIMRH 424 (516)
T ss_pred ---------HHHHHHHHhhcChHhhcCCCchhHHHHHhh
Confidence 23678888999999995 57777665
No 232
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=1.1e-34 Score=309.59 Aligned_cols=247 Identities=27% Similarity=0.419 Sum_probs=199.5
Q ss_pred EEeeeceEEEEEEEecC--C--ceEEEEEecccCc-ccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEEccCC
Q 002278 623 IVGYGASSTVYKCALKN--S--RPIAVKKLYNQYP-HNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNG 697 (943)
Q Consensus 623 ~lG~G~~g~Vy~~~~~~--~--~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 697 (943)
.||+|++|.||+|.+.. + ..||+|.+..... ...+.+.+|++++++++||||+++++++.. ...++||||+++|
T Consensus 2 ~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~~ 80 (257)
T cd05040 2 KLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPLG 80 (257)
T ss_pred cCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCCC
Confidence 58999999999998753 2 3689999876655 556788999999999999999999999988 8889999999999
Q ss_pred ChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCCce--
Q 002278 698 SLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHA-- 775 (943)
Q Consensus 698 ~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~~~-- 775 (943)
+|.+++..... ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||+++.........
T Consensus 81 ~L~~~l~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 156 (257)
T cd05040 81 SLLDRLRKDAL-GHFLISTLCDYAVQIANGMRYLESK---RFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVM 156 (257)
T ss_pred cHHHHHHhccc-ccCcHHHHHHHHHHHHHHHHHHHhC---CccccccCcccEEEecCCEEEeccccccccccccccceec
Confidence 99999874322 4689999999999999999999999 99999999999999999999999999998764432211
Q ss_pred eeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCccHHHHHHHhccccccccccCcccccCccCHH
Q 002278 776 STFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLS 854 (943)
Q Consensus 776 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 854 (943)
.....++..|+|||.+.+..++.++|||||||++|||++ |+.||................... . .+. .
T Consensus 157 ~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~-~--~~~--------~ 225 (257)
T cd05040 157 EEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKEGERL-E--RPE--------A 225 (257)
T ss_pred ccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCcC-C--CCc--------c
Confidence 112346789999999999899999999999999999999 999997654433222221111100 0 000 1
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 002278 855 AVRKTFQLALLCTKRYPSERPTMQEVARVLV 885 (943)
Q Consensus 855 ~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~ 885 (943)
.+..+.+++.+|++.+|++||++.++++.|.
T Consensus 226 ~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 226 CPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred CCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 2256788999999999999999999998874
No 233
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=1.1e-34 Score=311.89 Aligned_cols=255 Identities=24% Similarity=0.392 Sum_probs=202.8
Q ss_pred hccccceEEeeeceEEEEEEEecC-C---ceEEEEEecccC-cccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEE
Q 002278 616 ENLSEKYIVGYGASSTVYKCALKN-S---RPIAVKKLYNQY-PHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLF 690 (943)
Q Consensus 616 ~~~~~~~~lG~G~~g~Vy~~~~~~-~---~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 690 (943)
..|+..+.||+|+||.||+|..+. + ..||+|.+.... ....+++..|+++++.++||||+++++++.++...++|
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv 83 (269)
T cd05065 4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMII 83 (269)
T ss_pred HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEE
Confidence 457788999999999999999763 2 359999886542 33456889999999999999999999999999999999
Q ss_pred EEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCC
Q 002278 691 YDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPT 770 (943)
Q Consensus 691 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~ 770 (943)
|||+++|+|.+++... ...+++.++..++.|++.|++|||+. +++||||||+||+++.++.+|++|||++.....
T Consensus 84 ~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~~l~~al~~lH~~---g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~ 158 (269)
T cd05065 84 TEFMENGALDSFLRQN--DGQFTVIQLVGMLRGIAAGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFGLSRFLED 158 (269)
T ss_pred EecCCCCcHHHHHhhC--CCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccChheEEEcCCCcEEECCCcccccccc
Confidence 9999999999998642 34689999999999999999999999 999999999999999999999999999986643
Q ss_pred CCCcee--eeEe--cccceeCccccccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCccHHHHHHHhccccccccccCcc
Q 002278 771 AMPHAS--TFVL--GTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKADDNTVMEAVDPE 845 (943)
Q Consensus 771 ~~~~~~--~~~~--gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 845 (943)
...... .... .+..|+|||++.+..++.++||||+||++||+++ |..||............ ......+. .+
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i-~~~~~~~~--~~- 234 (269)
T cd05065 159 DTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAI-EQDYRLPP--PM- 234 (269)
T ss_pred CccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHH-HcCCcCCC--cc-
Confidence 322111 1111 2457999999999999999999999999999887 99999765543222221 11111100 01
Q ss_pred cccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhc
Q 002278 846 VSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLVSL 887 (943)
Q Consensus 846 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~~ 887 (943)
..+..+.+++..||..+|++||++.+++..|+.+
T Consensus 235 --------~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 235 --------DCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred --------cCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 1124567899999999999999999999998754
No 234
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=6.3e-35 Score=315.66 Aligned_cols=255 Identities=22% Similarity=0.308 Sum_probs=206.8
Q ss_pred hhccccceEEeeeceEEEEEEEec-CCceEEEEEecccCcccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEE
Q 002278 615 TENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDY 693 (943)
Q Consensus 615 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 693 (943)
.++|++.+.||+|+||.||+|.++ ++..||+|.+........+.+.+|++++++++||||+++++++..+...++||||
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEF 83 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeec
Confidence 456888999999999999999975 5788999998765555567788999999999999999999999999999999999
Q ss_pred ccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCC
Q 002278 694 MVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMP 773 (943)
Q Consensus 694 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~ 773 (943)
+++++|.+++.. ....+++..+..++.|++.|++|||+. +|+||||||+||+++.++.++|+|||++........
T Consensus 84 ~~~~~L~~~~~~--~~~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~ 158 (280)
T cd06611 84 CDGGALDSIMLE--LERGLTEPQIRYVCRQMLEALNFLHSH---KVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQ 158 (280)
T ss_pred cCCCcHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEECCCCCEEEccCccchhhccccc
Confidence 999999999863 234689999999999999999999999 999999999999999999999999999876543322
Q ss_pred ceeeeEecccceeCccccc-----cCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCccccc
Q 002278 774 HASTFVLGTIGYIDPEYAH-----TSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSV 848 (943)
Q Consensus 774 ~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 848 (943)
. .....|++.|+|||++. +..++.++|||||||++|||++|+.||................. +.+..
T Consensus 159 ~-~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-------~~~~~ 230 (280)
T cd06611 159 K-RDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKILKSEP-------PTLDQ 230 (280)
T ss_pred c-cceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHhcCCC-------CCcCC
Confidence 2 23345899999999875 34577899999999999999999999987654433322221111 11100
Q ss_pred CccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 002278 849 TCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLV 885 (943)
Q Consensus 849 ~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~ 885 (943)
. ......+.+++..||+.+|++||++.+++++-+
T Consensus 231 ~---~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~ 264 (280)
T cd06611 231 P---SKWSSSFNDFLKSCLVKDPDDRPTAAELLKHPF 264 (280)
T ss_pred c---ccCCHHHHHHHHHHhccChhhCcCHHHHhcChh
Confidence 0 011245678999999999999999999998754
No 235
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=1.7e-35 Score=327.65 Aligned_cols=243 Identities=22% Similarity=0.230 Sum_probs=191.0
Q ss_pred EeeeceEEEEEEEec-CCceEEEEEecccC---cccHHHHHHHHHHHhcC---CCCCcceeeeEEecCCcceEEEEEccC
Q 002278 624 VGYGASSTVYKCALK-NSRPIAVKKLYNQY---PHNLREFETELETIGSI---RHRNIVSLHGYALSPYGNLLFYDYMVN 696 (943)
Q Consensus 624 lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~~~~~~lv~e~~~~ 696 (943)
||+|+||+||+|+.+ +++.||+|++.... ......+..|..++... +||||+++++++.+....++||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 699999999999976 57899999985432 12223445566666655 699999999999999999999999999
Q ss_pred CChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCCcee
Q 002278 697 GSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHAS 776 (943)
Q Consensus 697 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~~~~ 776 (943)
|+|.+++. ....+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++....... ..
T Consensus 81 g~L~~~l~---~~~~~~~~~~~~~~~qil~al~~LH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~-~~ 153 (330)
T cd05586 81 GELFWHLQ---KEGRFSEDRAKFYIAELVLALEHLHKY---DIVYRDLKPENILLDATGHIALCDFGLSKANLTDNK-TT 153 (330)
T ss_pred ChHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCC-Cc
Confidence 99999886 345689999999999999999999999 999999999999999999999999999975432222 22
Q ss_pred eeEecccceeCccccccC-CCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccccCccCHHH
Q 002278 777 TFVLGTIGYIDPEYAHTS-RLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSA 855 (943)
Q Consensus 777 ~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 855 (943)
....||+.|+|||++.+. .++.++||||+||++|||+||+.||........+.........+... . .
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~---~---------~ 221 (330)
T cd05586 154 NTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGKVRFPKN---V---------L 221 (330)
T ss_pred cCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHcCCCCCCCc---c---------C
Confidence 335699999999998764 48999999999999999999999998765443332222221111110 0 1
Q ss_pred HHHHHHHHHHccCCCCCCCC----CHHHHHHHHh
Q 002278 856 VRKTFQLALLCTKRYPSERP----TMQEVARVLV 885 (943)
Q Consensus 856 ~~~l~~l~~~cl~~dP~~RP----t~~el~~~L~ 885 (943)
...+.+++.+|++.||++|| ++.++++|-+
T Consensus 222 ~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h~~ 255 (330)
T cd05586 222 SDEGRQFVKGLLNRNPQHRLGAHRDAVELKEHPF 255 (330)
T ss_pred CHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcCcc
Confidence 23566899999999999998 6778777643
No 236
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=8.9e-35 Score=313.42 Aligned_cols=250 Identities=26% Similarity=0.399 Sum_probs=205.6
Q ss_pred ccccceEEeeeceEEEEEEEec-CCceEEEEEecccC-cccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEEc
Q 002278 617 NLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQY-PHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYM 694 (943)
Q Consensus 617 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 694 (943)
+|+..+.||.|+||.||+|.+. +++.||+|.+.... ......+.+|+++++.++||||+++++++.++...++|+||+
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 81 (274)
T cd06609 2 LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEYC 81 (274)
T ss_pred hhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEee
Confidence 6778889999999999999976 57889999886443 344567889999999999999999999999999999999999
Q ss_pred cCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCCc
Q 002278 695 VNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPH 774 (943)
Q Consensus 695 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~~ 774 (943)
++++|.+++.. ..+++..+..++.|++.|+.|||+. +++||||+|+||++++++.++++|||+++........
T Consensus 82 ~~~~L~~~~~~----~~~~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~ 154 (274)
T cd06609 82 GGGSCLDLLKP----GKLDETYIAFILREVLLGLEYLHEE---GKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMSK 154 (274)
T ss_pred CCCcHHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEcccccceeecccccc
Confidence 99999999863 2789999999999999999999998 9999999999999999999999999999877544222
Q ss_pred eeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccccCccCHH
Q 002278 775 ASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLS 854 (943)
Q Consensus 775 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 854 (943)
.....|++.|+|||+..+..++.++|||||||++|||+||+.||............... ..+.+... .
T Consensus 155 -~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~-------~~~~~~~~----~ 222 (274)
T cd06609 155 -RNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKN-------NPPSLEGN----K 222 (274)
T ss_pred -cccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhhhc-------CCCCCccc----c
Confidence 22345888999999999988999999999999999999999999765543322221111 11111111 0
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 002278 855 AVRKTFQLALLCTKRYPSERPTMQEVARVLV 885 (943)
Q Consensus 855 ~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~ 885 (943)
....+.+++..|+..+|++|||+++++++-+
T Consensus 223 ~~~~~~~~l~~~l~~~p~~Rpt~~~il~~~~ 253 (274)
T cd06609 223 FSKPFKDFVSLCLNKDPKERPSAKELLKHKF 253 (274)
T ss_pred cCHHHHHHHHHHhhCChhhCcCHHHHhhChh
Confidence 2245778999999999999999999998744
No 237
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=5.7e-35 Score=311.51 Aligned_cols=251 Identities=25% Similarity=0.374 Sum_probs=206.3
Q ss_pred hhccccceEEeeeceEEEEEEEecC-CceEEEEEecccCcccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEE
Q 002278 615 TENLSEKYIVGYGASSTVYKCALKN-SRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDY 693 (943)
Q Consensus 615 ~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 693 (943)
.++|+..+.||+|+||.||+|..+. ++.||+|.+..... .+.+.+|+++++.++||||+++++++.++...++++||
T Consensus 2 ~~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~ 79 (256)
T cd06612 2 EEVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEY 79 (256)
T ss_pred cccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEec
Confidence 3578888999999999999999875 78899998865422 67899999999999999999999999999999999999
Q ss_pred ccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCC
Q 002278 694 MVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMP 773 (943)
Q Consensus 694 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~ 773 (943)
+++++|.+++.. ....+++..+..++.|++.|++|||+. +++||||+|+||++++++.++|+|||++........
T Consensus 80 ~~~~~L~~~l~~--~~~~l~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~ 154 (256)
T cd06612 80 CGAGSVSDIMKI--TNKTLTEEEIAAILYQTLKGLEYLHSN---KKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMA 154 (256)
T ss_pred CCCCcHHHHHHh--CccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEECCCCcEEEcccccchhcccCcc
Confidence 999999999863 235689999999999999999999999 999999999999999999999999999987654322
Q ss_pred ceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccccCccCH
Q 002278 774 HASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDL 853 (943)
Q Consensus 774 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 853 (943)
......|+..|+|||++.+..++.++||||||+++|+|++|+.||................ .+.... ..
T Consensus 155 -~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~~~-------~~~~~~---~~ 223 (256)
T cd06612 155 -KRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPNKP-------PPTLSD---PE 223 (256)
T ss_pred -ccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhccCC-------CCCCCc---hh
Confidence 2233458899999999998899999999999999999999999998655433222111100 011110 11
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002278 854 SAVRKTFQLALLCTKRYPSERPTMQEVARV 883 (943)
Q Consensus 854 ~~~~~l~~l~~~cl~~dP~~RPt~~el~~~ 883 (943)
.....+.+++.+|++.+|++|||+.+++++
T Consensus 224 ~~~~~~~~~i~~~l~~~P~~Rps~~~il~~ 253 (256)
T cd06612 224 KWSPEFNDFVKKCLVKDPEERPSAIQLLQH 253 (256)
T ss_pred hcCHHHHHHHHHHHhcChhhCcCHHHHhcC
Confidence 122467889999999999999999999875
No 238
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=2.3e-34 Score=306.79 Aligned_cols=249 Identities=23% Similarity=0.374 Sum_probs=200.3
Q ss_pred hhccccceEEeeeceEEEEEEEecCCceEEEEEecccCcccHHHHHHHHHHHhcCCCCCcceeeeEEe-cCCcceEEEEE
Q 002278 615 TENLSEKYIVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYAL-SPYGNLLFYDY 693 (943)
Q Consensus 615 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~-~~~~~~lv~e~ 693 (943)
.++|+..+.||+|+||.||+|..+ +..||+|.+... ...+.+.+|+.++++++|+|++++++++. .+...+++|||
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~ 81 (256)
T cd05082 5 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 81 (256)
T ss_pred HHhCeeeeeecccCCCeEEEEEEc-CCcEEEEEeCCC--chHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEEC
Confidence 457888999999999999999776 778999988543 33567889999999999999999999865 44568999999
Q ss_pred ccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCC
Q 002278 694 MVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMP 773 (943)
Q Consensus 694 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~ 773 (943)
+++|+|.+++... ....+++..+..++.|++.||+|||++ +++||||||+||++++++.+|++|||+++.......
T Consensus 82 ~~~~~L~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~ 157 (256)
T cd05082 82 MAKGSLVDYLRSR-GRSVLGGDCLLKFSLDVCEAMEYLEAN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD 157 (256)
T ss_pred CCCCcHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeccccchheEEEcCCCcEEecCCccceeccccCC
Confidence 9999999998643 223588999999999999999999999 999999999999999999999999999976533221
Q ss_pred ceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCccHHHHHHHhccccccccccCcccccCccC
Q 002278 774 HASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVD 852 (943)
Q Consensus 774 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 852 (943)
...++..|+|||+..+..++.++|||||||++|||++ |+.||..... ............ +....
T Consensus 158 ----~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~-~~~~~~~~~~~~------~~~~~---- 222 (256)
T cd05082 158 ----TGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL-KDVVPRVEKGYK------MDAPD---- 222 (256)
T ss_pred ----CCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCH-HHHHHHHhcCCC------CCCCC----
Confidence 1234678999999998899999999999999999998 9999975433 222222211111 11111
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhh
Q 002278 853 LSAVRKTFQLALLCTKRYPSERPTMQEVARVLVS 886 (943)
Q Consensus 853 ~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~ 886 (943)
.....+.+++.+|++.+|++|||+.++++.|+.
T Consensus 223 -~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 255 (256)
T cd05082 223 -GCPPVVYDVMKQCWHLDAATRPSFLQLREQLEH 255 (256)
T ss_pred -CCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhc
Confidence 112467789999999999999999999999875
No 239
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=6.4e-35 Score=324.52 Aligned_cols=261 Identities=26% Similarity=0.346 Sum_probs=202.2
Q ss_pred hhccccceEEeeeceEEEEEEEe------cCCceEEEEEecccCc-ccHHHHHHHHHHHhcC-CCCCcceeeeEEecC-C
Q 002278 615 TENLSEKYIVGYGASSTVYKCAL------KNSRPIAVKKLYNQYP-HNLREFETELETIGSI-RHRNIVSLHGYALSP-Y 685 (943)
Q Consensus 615 ~~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~-~ 685 (943)
.++|+..+.||+|+||.||+|.+ ..++.||||++..... .....+.+|+.+++++ +||||+++++++... .
T Consensus 6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 85 (343)
T cd05103 6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 85 (343)
T ss_pred hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCC
Confidence 45789999999999999999974 2467899999865432 2345688999999999 689999999988654 4
Q ss_pred cceEEEEEccCCChhhhccCCCC---------------------------------------------------------
Q 002278 686 GNLLFYDYMVNGSLWDLLHGPSK--------------------------------------------------------- 708 (943)
Q Consensus 686 ~~~lv~e~~~~g~L~~~l~~~~~--------------------------------------------------------- 708 (943)
..+++|||+++|+|.+++.....
T Consensus 86 ~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (343)
T cd05103 86 PLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEE 165 (343)
T ss_pred ceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhh
Confidence 56899999999999998853210
Q ss_pred -------CccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCCc-eeeeEe
Q 002278 709 -------KVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPH-ASTFVL 780 (943)
Q Consensus 709 -------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~~-~~~~~~ 780 (943)
...+++.++..++.|++.||+|||++ +|+||||||+||++++++.+||+|||+++........ ......
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~ 242 (343)
T cd05103 166 AEQEDLYKKVLTLEDLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDAR 242 (343)
T ss_pred hhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCC
Confidence 12468888999999999999999999 9999999999999999999999999999865322111 111223
Q ss_pred cccceeCccccccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCccHHHHHHHhccccccccccCcccccCccCHHHHHHH
Q 002278 781 GTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAVRKT 859 (943)
Q Consensus 781 gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 859 (943)
++..|+|||.+.+..++.++||||||+++|||++ |..||.................. +..+.. ....+
T Consensus 243 ~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~------~~~~~~-----~~~~~ 311 (343)
T cd05103 243 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTR------MRAPDY-----TTPEM 311 (343)
T ss_pred CCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHhccCC------CCCCCC-----CCHHH
Confidence 5678999999998899999999999999999997 99999765432222222211111 011100 11357
Q ss_pred HHHHHHccCCCCCCCCCHHHHHHHHhhcCC
Q 002278 860 FQLALLCTKRYPSERPTMQEVARVLVSLLP 889 (943)
Q Consensus 860 ~~l~~~cl~~dP~~RPt~~el~~~L~~~~~ 889 (943)
.+++..||+.+|++|||+.+++++|+.+..
T Consensus 312 ~~~~~~cl~~~p~~Rps~~eil~~l~~~~~ 341 (343)
T cd05103 312 YQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 341 (343)
T ss_pred HHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 789999999999999999999999987654
No 240
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=1.7e-34 Score=308.79 Aligned_cols=249 Identities=29% Similarity=0.415 Sum_probs=202.8
Q ss_pred eEEeeeceEEEEEEEecC----CceEEEEEecccCcc-cHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEEccC
Q 002278 622 YIVGYGASSTVYKCALKN----SRPIAVKKLYNQYPH-NLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVN 696 (943)
Q Consensus 622 ~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 696 (943)
+.||+|+||.||+|.... +..||+|.+...... ..+.+.+|+++++.++|+||+++++++......+++|||+++
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG 80 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence 368999999999999764 788999998755433 367889999999999999999999999999999999999999
Q ss_pred CChhhhccCCCC------CccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCC
Q 002278 697 GSLWDLLHGPSK------KVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPT 770 (943)
Q Consensus 697 g~L~~~l~~~~~------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~ 770 (943)
++|.+++..... ...+++..+..++.|++.|++|||++ +++||||||+||++++++.+||+|||.+.....
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~ 157 (262)
T cd00192 81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASK---KFVHRDLAARNCLVGEDLVVKISDFGLSRDVYD 157 (262)
T ss_pred CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcC---CcccCccCcceEEECCCCcEEEccccccccccc
Confidence 999999975321 36789999999999999999999998 999999999999999999999999999987754
Q ss_pred CCC-ceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCccHHHHHHHhccccccccccCccccc
Q 002278 771 AMP-HASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSV 848 (943)
Q Consensus 771 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 848 (943)
... .......++..|+|||.+.+..++.++||||+||++|||++ |..||......... ........ ...+.
T Consensus 158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~-~~~~~~~~------~~~~~ 230 (262)
T cd00192 158 DDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVL-EYLRKGYR------LPKPE 230 (262)
T ss_pred ccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHH-HHHHcCCC------CCCCc
Confidence 321 11223447889999999998889999999999999999999 69999876443322 22221110 11110
Q ss_pred CccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 002278 849 TCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLV 885 (943)
Q Consensus 849 ~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~ 885 (943)
.....+.+++..|++.+|++|||+.+++++|+
T Consensus 231 -----~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 231 -----YCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred -----cCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 11356789999999999999999999999873
No 241
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=1.2e-34 Score=314.93 Aligned_cols=257 Identities=29% Similarity=0.443 Sum_probs=203.7
Q ss_pred HhhccccceEEeeeceEEEEEEEec------CCceEEEEEecccCc-ccHHHHHHHHHHHhcCCCCCcceeeeEEecCCc
Q 002278 614 STENLSEKYIVGYGASSTVYKCALK------NSRPIAVKKLYNQYP-HNLREFETELETIGSIRHRNIVSLHGYALSPYG 686 (943)
Q Consensus 614 ~~~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 686 (943)
..++|+..+.||+|+||.||+|... ++..||+|.+..... ....++.+|++++++++||||+++++++.+++.
T Consensus 3 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~ 82 (288)
T cd05050 3 PRNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKP 82 (288)
T ss_pred ChHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCc
Confidence 3467888999999999999999864 357899998865432 334678899999999999999999999999999
Q ss_pred ceEEEEEccCCChhhhccCCC-------------------CCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCc
Q 002278 687 NLLFYDYMVNGSLWDLLHGPS-------------------KKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSS 747 (943)
Q Consensus 687 ~~lv~e~~~~g~L~~~l~~~~-------------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~ 747 (943)
.+++|||+++|+|.+++.... ....+++.+++.++.|++.||+|||+. +++||||||+
T Consensus 83 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~---~i~H~dl~p~ 159 (288)
T cd05050 83 MCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSER---KFVHRDLATR 159 (288)
T ss_pred cEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CeecccccHh
Confidence 999999999999999986321 123478899999999999999999999 9999999999
Q ss_pred cEEECCCCceeecccccccccCCCCC-ceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCccH
Q 002278 748 NILIDENFDAHLSDFGIARCIPTAMP-HASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNL 825 (943)
Q Consensus 748 Nill~~~~~~kl~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~p~~~~~~~ 825 (943)
||++++++.++|+|||+++.+..... .......++..|+|||...+..++.++|||||||++|||++ |..||.+....
T Consensus 160 nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~ 239 (288)
T cd05050 160 NCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHE 239 (288)
T ss_pred heEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHH
Confidence 99999999999999999876532211 11112234678999999998899999999999999999998 88898755433
Q ss_pred HHHHHHhccccccccccCcccccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 002278 826 HQLIMSKADDNTVMEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLV 885 (943)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~ 885 (943)
+ ......... ... ..+ .....+.+++.+|++.+|++|||+.|+++.|+
T Consensus 240 ~-~~~~~~~~~-~~~-~~~---------~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~ 287 (288)
T cd05050 240 E-VIYYVRDGN-VLS-CPD---------NCPLELYNLMRLCWSKLPSDRPSFASINRILQ 287 (288)
T ss_pred H-HHHHHhcCC-CCC-CCC---------CCCHHHHHHHHHHcccCcccCCCHHHHHHHhh
Confidence 2 222221111 110 001 11256788999999999999999999999886
No 242
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=3.7e-35 Score=332.14 Aligned_cols=259 Identities=21% Similarity=0.223 Sum_probs=199.7
Q ss_pred hhccccceEEeeeceEEEEEEEec---CCceEEEEEecccCcccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEE
Q 002278 615 TENLSEKYIVGYGASSTVYKCALK---NSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFY 691 (943)
Q Consensus 615 ~~~~~~~~~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 691 (943)
..+|.+.+.||+|+||.||+|... .++.||+|.+... ....+|+++++.++|||||++++++......++||
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 165 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVM 165 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEe
Confidence 457999999999999999999754 3577899987543 34568999999999999999999999988999999
Q ss_pred EEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCC
Q 002278 692 DYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTA 771 (943)
Q Consensus 692 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~ 771 (943)
|++. ++|.+++. ....+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.++|+|||+++.....
T Consensus 166 e~~~-~~l~~~l~---~~~~l~~~~~~~i~~ql~~aL~~LH~~---givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~ 238 (392)
T PHA03207 166 PKYK-CDLFTYVD---RSGPLPLEQAITIQRRLLEALAYLHGR---GIIHRDVKTENIFLDEPENAVLGDFGAACKLDAH 238 (392)
T ss_pred hhcC-CCHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEccCccccccCcc
Confidence 9985 68888884 345789999999999999999999999 9999999999999999999999999999866443
Q ss_pred CCc-eeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCcc---HHHHHHHhcccccccc-------
Q 002278 772 MPH-ASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESN---LHQLIMSKADDNTVME------- 840 (943)
Q Consensus 772 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~---~~~~~~~~~~~~~~~~------- 840 (943)
... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.+... ...+............
T Consensus 239 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~ 318 (392)
T PHA03207 239 PDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGS 318 (392)
T ss_pred cccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccc
Confidence 222 22245699999999999999999999999999999999999999975432 1111111110000000
Q ss_pred ------------ccCcccccC--ccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 002278 841 ------------AVDPEVSVT--CVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLV 885 (943)
Q Consensus 841 ------------~~~~~~~~~--~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~ 885 (943)
...+..... .........+.+++..|+..||++|||+.|++.+-+
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~ 377 (392)
T PHA03207 319 TNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPL 377 (392)
T ss_pred hhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhCch
Confidence 000100000 000011245678999999999999999999999854
No 243
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=4.7e-35 Score=317.24 Aligned_cols=257 Identities=26% Similarity=0.338 Sum_probs=205.0
Q ss_pred hhccccceEEeeeceEEEEEEEec-CCceEEEEEecccC-cccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEE
Q 002278 615 TENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQY-PHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYD 692 (943)
Q Consensus 615 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 692 (943)
.++|+..+.||+|+||+||+|... +++.||+|++.... ....+.+.+|+++++.++||||+++++++......++|||
T Consensus 4 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 83 (284)
T cd06620 4 NEDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCME 83 (284)
T ss_pred HHHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEe
Confidence 356788889999999999999976 57888999875443 3345678899999999999999999999999999999999
Q ss_pred EccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCC
Q 002278 693 YMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAM 772 (943)
Q Consensus 693 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~ 772 (943)
|+++++|.+++. ..+.+++..+..++.+++.|+.|||+.. +++||||||+||+++.++.++|+|||++.......
T Consensus 84 ~~~~~~L~~~~~---~~~~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~ 158 (284)
T cd06620 84 FMDCGSLDRIYK---KGGPIPVEILGKIAVAVVEGLTYLYNVH--RIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSI 158 (284)
T ss_pred cCCCCCHHHHHH---hccCCCHHHHHHHHHHHHHHHHHHHHhc--CeeccCCCHHHEEECCCCcEEEccCCcccchhhhc
Confidence 999999999886 3346899999999999999999999731 89999999999999999999999999987543221
Q ss_pred CceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccH----------HHHHHHhcccccccccc
Q 002278 773 PHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNL----------HQLIMSKADDNTVMEAV 842 (943)
Q Consensus 773 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~----------~~~~~~~~~~~~~~~~~ 842 (943)
. ....|+..|+|||++.+..++.++|||||||++|+++||+.||...... ..+...... ..
T Consensus 159 ~---~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~------~~ 229 (284)
T cd06620 159 A---DTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQ------EP 229 (284)
T ss_pred c---CccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhh------cc
Confidence 1 2245899999999998889999999999999999999999999854331 111111110 00
Q ss_pred CcccccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcCC
Q 002278 843 DPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLVSLLP 889 (943)
Q Consensus 843 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~~~~ 889 (943)
.+.+. .......+.+++.+|++.||++|||+.|++++.+-+..
T Consensus 230 ~~~~~----~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~~~ 272 (284)
T cd06620 230 PPRLP----SSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFIQA 272 (284)
T ss_pred CCCCC----chhcCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccc
Confidence 11111 01123467789999999999999999999998655443
No 244
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=1.7e-34 Score=310.33 Aligned_cols=249 Identities=26% Similarity=0.406 Sum_probs=195.4
Q ss_pred EEeeeceEEEEEEEecC-Cc--eEEEEEecccC-cccHHHHHHHHHHHhcC-CCCCcceeeeEEecCCcceEEEEEccCC
Q 002278 623 IVGYGASSTVYKCALKN-SR--PIAVKKLYNQY-PHNLREFETELETIGSI-RHRNIVSLHGYALSPYGNLLFYDYMVNG 697 (943)
Q Consensus 623 ~lG~G~~g~Vy~~~~~~-~~--~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~g 697 (943)
.||+|+||.||+|.+++ +. .+|+|.+.... ....+.+.+|+++++++ +||||+++++++......++||||+++|
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 81 (270)
T cd05047 2 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHG 81 (270)
T ss_pred cCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCCC
Confidence 58999999999999764 33 46888876433 33456788999999999 7999999999999999999999999999
Q ss_pred ChhhhccCCC-------------CCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeeccccc
Q 002278 698 SLWDLLHGPS-------------KKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGI 764 (943)
Q Consensus 698 ~L~~~l~~~~-------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGl 764 (943)
+|.+++.... ....+++.++..++.|++.|++|||+. +++||||||+||++++++.+|++|||+
T Consensus 82 ~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nili~~~~~~kl~dfgl 158 (270)
T cd05047 82 NLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGL 158 (270)
T ss_pred cHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccccceEEEcCCCeEEECCCCC
Confidence 9999986422 123578999999999999999999998 999999999999999999999999999
Q ss_pred ccccCCCCCceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCccHHHHHHHhccccccccccC
Q 002278 765 ARCIPTAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKADDNTVMEAVD 843 (943)
Q Consensus 765 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 843 (943)
+....... .......+..|+|||++.+..++.++|||||||++|||++ |..||.+.......... .... .
T Consensus 159 ~~~~~~~~--~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~-~~~~------~ 229 (270)
T cd05047 159 SRGQEVYV--KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKL-PQGY------R 229 (270)
T ss_pred ccccchhh--hccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHHHHHHH-hCCC------C
Confidence 86332111 1111224567999999988889999999999999999997 99999765433222111 1110 1
Q ss_pred cccccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcC
Q 002278 844 PEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLVSLL 888 (943)
Q Consensus 844 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~~~ 888 (943)
..... .....+.+++.+|++.+|.+|||+.++++.|..+.
T Consensus 230 ~~~~~-----~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 230 LEKPL-----NCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred CCCCC-----cCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 11111 11246779999999999999999999999998654
No 245
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.1e-35 Score=322.74 Aligned_cols=244 Identities=24% Similarity=0.382 Sum_probs=200.8
Q ss_pred eEEeeeceEEEEEEEec-CCceEEEEEe--c--ccCcccHHHHHHHHHHHhcCCCCCcceeeeEEecCCc--ceEEEEEc
Q 002278 622 YIVGYGASSTVYKCALK-NSRPIAVKKL--Y--NQYPHNLREFETELETIGSIRHRNIVSLHGYALSPYG--NLLFYDYM 694 (943)
Q Consensus 622 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~--~--~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~--~~lv~e~~ 694 (943)
.+||+|+|-+||+|.+. .|..||-=.+ . ...+...++|..|+++|+.|+|||||++|.++.+... ..+|+|.+
T Consensus 46 evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL~ 125 (632)
T KOG0584|consen 46 EVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITELF 125 (632)
T ss_pred hhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeecc
Confidence 46999999999999976 3556654222 1 2235556899999999999999999999999988766 67889999
Q ss_pred cCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECC-CCceeecccccccccCCCCC
Q 002278 695 VNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDE-NFDAHLSDFGIARCIPTAMP 773 (943)
Q Consensus 695 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~-~~~~kl~DFGla~~~~~~~~ 773 (943)
..|+|..|.+ ...+.+...+..|++||++||.|||++ +|+|+|||||-.||+|+. .|.|||+|.|+|+.+.....
T Consensus 126 TSGtLr~Y~k---k~~~vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s~a 201 (632)
T KOG0584|consen 126 TSGTLREYRK---KHRRVNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKSHA 201 (632)
T ss_pred cCCcHHHHHH---HhccCCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecchhHHHHhhcccc
Confidence 9999999997 456788999999999999999999997 899999999999999984 58999999999998765533
Q ss_pred ceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccccCccCH
Q 002278 774 HASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDL 853 (943)
Q Consensus 774 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 853 (943)
. . ++|||.|||||+.. ..|++.+||||||++++||+|+..||..-.+..++.+......+ +..+. ...
T Consensus 202 k--s-vIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiK-P~sl~-----kV~-- 269 (632)
T KOG0584|consen 202 K--S-VIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIK-PAALS-----KVK-- 269 (632)
T ss_pred c--e-eccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCCC-HHHhh-----ccC--
Confidence 2 2 78999999999888 77999999999999999999999999988877777665543322 11111 111
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 002278 854 SAVRKTFQLALLCTKRYPSERPTMQEVARVL 884 (943)
Q Consensus 854 ~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L 884 (943)
...+.++|.+|+.. .++|||+.|++++-
T Consensus 270 --dPevr~fIekCl~~-~~~R~sa~eLL~d~ 297 (632)
T KOG0584|consen 270 --DPEVREFIEKCLAT-KSERLSAKELLKDP 297 (632)
T ss_pred --CHHHHHHHHHHhcC-chhccCHHHHhhCh
Confidence 13556899999999 99999999999864
No 246
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=1.7e-34 Score=312.83 Aligned_cols=256 Identities=25% Similarity=0.397 Sum_probs=200.5
Q ss_pred hccccceEEeeeceEEEEEEEec-----CCceEEEEEecccC-cccHHHHHHHHHHHhcCCCCCcceeeeEEecC--Ccc
Q 002278 616 ENLSEKYIVGYGASSTVYKCALK-----NSRPIAVKKLYNQY-PHNLREFETELETIGSIRHRNIVSLHGYALSP--YGN 687 (943)
Q Consensus 616 ~~~~~~~~lG~G~~g~Vy~~~~~-----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~ 687 (943)
..|++.+.||+|+||.||.|... .+..||+|.+.... ......+.+|+++++.++||||+++++++... ...
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05079 4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 83 (284)
T ss_pred hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCce
Confidence 45788899999999999999742 46789999986443 33456789999999999999999999998775 567
Q ss_pred eEEEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccc
Q 002278 688 LLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARC 767 (943)
Q Consensus 688 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~ 767 (943)
++||||+++++|.+++... ...+++.++..++.|++.||+|||+. +++||||||+||+++.++.++|+|||+++.
T Consensus 84 ~lv~e~~~g~~L~~~l~~~--~~~~~~~~~~~i~~~i~~aL~~lH~~---gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~ 158 (284)
T cd05079 84 KLIMEFLPSGSLKEYLPRN--KNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKA 158 (284)
T ss_pred EEEEEccCCCCHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccchheEEEcCCCCEEECCCccccc
Confidence 8999999999999998632 33589999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCc--eeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccH--------------HHHHHH
Q 002278 768 IPTAMPH--ASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNL--------------HQLIMS 831 (943)
Q Consensus 768 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~--------------~~~~~~ 831 (943)
....... ......|+..|+|||+..+..++.++|||||||++|||+|++.|+...... ......
T Consensus 159 ~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (284)
T cd05079 159 IETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRV 238 (284)
T ss_pred cccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHH
Confidence 6433221 112234677899999998888999999999999999999987765432111 111111
Q ss_pred hccccccccccCcccccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhc
Q 002278 832 KADDNTVMEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLVSL 887 (943)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~~ 887 (943)
..... ...... .....+.+++.+|++.+|++|||+.++++.++.+
T Consensus 239 ~~~~~------~~~~~~-----~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 239 LEEGK------RLPRPP-----NCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred HHcCc------cCCCCC-----CCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 10000 000010 1235788999999999999999999999998764
No 247
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=1.6e-34 Score=310.09 Aligned_cols=258 Identities=24% Similarity=0.401 Sum_probs=208.4
Q ss_pred hccccceEEeeeceEEEEEEEec-CCceEEEEEecccC-cccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEE
Q 002278 616 ENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQY-PHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDY 693 (943)
Q Consensus 616 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 693 (943)
++|+..+.||.|+||+||+|... ++..+|+|++.... ......+.+|+++++.++|+||+++++.+..+...+++||+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 80 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPY 80 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEec
Confidence 36888999999999999999965 57789999886433 33567789999999999999999999999999999999999
Q ss_pred ccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCC
Q 002278 694 MVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMP 773 (943)
Q Consensus 694 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~ 773 (943)
+++++|.+++........+++..+..++.|++.|++|||+. +++||||||+||++++++.++|+|||++..+.....
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~---~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~ 157 (267)
T cd06610 81 LSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSN---GQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGD 157 (267)
T ss_pred cCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEcccchHHHhccCcc
Confidence 99999999987433335689999999999999999999999 999999999999999999999999999987654322
Q ss_pred c---eeeeEecccceeCccccccC-CCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccccC
Q 002278 774 H---ASTFVLGTIGYIDPEYAHTS-RLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVT 849 (943)
Q Consensus 774 ~---~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 849 (943)
. ......|+..|+|||++... .++.++|+|||||++|||++|+.||.................. .+...
T Consensus 158 ~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~-------~~~~~ 230 (267)
T cd06610 158 RTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQNDPP-------SLETG 230 (267)
T ss_pred ccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhcCCCC-------CcCCc
Confidence 2 22334589999999998876 7899999999999999999999999876554433332222111 11111
Q ss_pred ccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002278 850 CVDLSAVRKTFQLALLCTKRYPSERPTMQEVARV 883 (943)
Q Consensus 850 ~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~ 883 (943)
.........+.+++..|+..||++||++.++++|
T Consensus 231 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~ 264 (267)
T cd06610 231 ADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKH 264 (267)
T ss_pred cccccccHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 0001223567899999999999999999999886
No 248
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=1.3e-34 Score=314.38 Aligned_cols=262 Identities=23% Similarity=0.282 Sum_probs=206.8
Q ss_pred ccccceEEeeeceEEEEEEEec-CCceEEEEEecccC--cccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEE
Q 002278 617 NLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQY--PHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDY 693 (943)
Q Consensus 617 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 693 (943)
+|+..+.||+|+||.||+|.+. +++.||+|++.... ......+.+|+.++++++||||+++++++..+...++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 80 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY 80 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence 4778899999999999999975 57899999986544 33456788999999999999999999999999999999999
Q ss_pred ccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCC
Q 002278 694 MVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMP 773 (943)
Q Consensus 694 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~ 773 (943)
+ +++|.+++... ...+++.++..++.|+++||+|||+. +++|+||||+||+++.++.++++|||.+........
T Consensus 81 ~-~~~L~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~ 154 (286)
T cd07832 81 M-PSDLSEVLRDE--ERPLPEAQVKSYMRMLLKGVAYMHAN---GIMHRDLKPANLLISADGVLKIADFGLARLFSEEEP 154 (286)
T ss_pred c-CCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCC
Confidence 9 99999998632 25689999999999999999999999 999999999999999999999999999987654432
Q ss_pred ceeeeEecccceeCccccccC-CCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccc-----
Q 002278 774 HASTFVLGTIGYIDPEYAHTS-RLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVS----- 847 (943)
Q Consensus 774 ~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 847 (943)
.......|+..|+|||.+.+. .++.++||||+||++|||+||++||.+..+...+..............++.+.
T Consensus 155 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (286)
T cd07832 155 RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDY 234 (286)
T ss_pred CccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchh
Confidence 223344689999999988754 46899999999999999999999887766554443332211111110001000
Q ss_pred ------cC----c--cCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 002278 848 ------VT----C--VDLSAVRKTFQLALLCTKRYPSERPTMQEVARVL 884 (943)
Q Consensus 848 ------~~----~--~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L 884 (943)
.. . ........+.+++.+|++.+|++||++.++++|-
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h~ 283 (286)
T cd07832 235 NKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRHP 283 (286)
T ss_pred hcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhCc
Confidence 00 0 0001236778999999999999999999999874
No 249
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=1.6e-34 Score=316.03 Aligned_cols=259 Identities=26% Similarity=0.404 Sum_probs=201.6
Q ss_pred hhccccceEEeeeceEEEEEEEec-CCc----eEEEEEecccCc-ccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcce
Q 002278 615 TENLSEKYIVGYGASSTVYKCALK-NSR----PIAVKKLYNQYP-HNLREFETELETIGSIRHRNIVSLHGYALSPYGNL 688 (943)
Q Consensus 615 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~----~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 688 (943)
.++|+..+.||+|+||.||+|.+. ++. .||+|.+..... ....++.+|+.+++.++||||+++++++... ..+
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~ 84 (303)
T cd05110 6 ETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQ 84 (303)
T ss_pred hhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Cce
Confidence 356778889999999999999865 333 468887764432 2334688999999999999999999998764 467
Q ss_pred EEEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeeccccccccc
Q 002278 689 LFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCI 768 (943)
Q Consensus 689 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~ 768 (943)
+++||+++|+|.+++.. ....+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 85 ~v~e~~~~g~l~~~~~~--~~~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~ 159 (303)
T cd05110 85 LVTQLMPHGCLLDYVHE--HKDNIGSQLLLNWCVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLL 159 (303)
T ss_pred eeehhcCCCCHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHhhc---CeeccccccceeeecCCCceEEccccccccc
Confidence 89999999999999863 234588999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCc-eeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCccHHHHHHHhccccccccccCccc
Q 002278 769 PTAMPH-ASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKADDNTVMEAVDPEV 846 (943)
Q Consensus 769 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 846 (943)
...... ......++..|+|||.+.+..++.++|||||||++|||++ |+.||.+..... ............. .+
T Consensus 160 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~-~~~~~~~~~~~~~--~~-- 234 (303)
T cd05110 160 EGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTRE-IPDLLEKGERLPQ--PP-- 234 (303)
T ss_pred cCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHH-HHHHHHCCCCCCC--CC--
Confidence 433221 1112335678999999998899999999999999999997 999997653221 1111111111100 00
Q ss_pred ccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcCCCC
Q 002278 847 SVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLVSLLPAP 891 (943)
Q Consensus 847 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~~~~~~ 891 (943)
.....+.+++..||..+|++||++.++++.++.+...+
T Consensus 235 -------~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~~ 272 (303)
T cd05110 235 -------ICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARDP 272 (303)
T ss_pred -------CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhch
Confidence 01245678999999999999999999999998875443
No 250
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-35 Score=327.61 Aligned_cols=260 Identities=24% Similarity=0.371 Sum_probs=208.1
Q ss_pred hccccceEEeeeceEEEEEEEec-CC----ceEEEEEeccc-CcccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceE
Q 002278 616 ENLSEKYIVGYGASSTVYKCALK-NS----RPIAVKKLYNQ-YPHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLL 689 (943)
Q Consensus 616 ~~~~~~~~lG~G~~g~Vy~~~~~-~~----~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 689 (943)
......++||+|+||+||+|.+- .+ -+||+|++... .++...++.+|+-+|.+++|||+++++|+|..+. ..|
T Consensus 696 telkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~ql 774 (1177)
T KOG1025|consen 696 TELKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQL 774 (1177)
T ss_pred hhhhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHH
Confidence 34556789999999999999864 23 46899988644 3556678999999999999999999999998876 889
Q ss_pred EEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccC
Q 002278 690 FYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIP 769 (943)
Q Consensus 690 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~ 769 (943)
|++|++.|+|.|+++. .+..+..+..+.|..|||+||.|||++ ++|||||.++||||.+-.++||.|||+|+...
T Consensus 775 vtq~mP~G~LlDyvr~--hr~~igsq~lLnw~~QIAkgM~YLe~q---rlVHrdLaaRNVLVksP~hvkitdfgla~ll~ 849 (1177)
T KOG1025|consen 775 VTQLMPLGCLLDYVRE--HRDNIGSQDLLNWCYQIAKGMKYLEEQ---RLVHRDLAARNVLVKSPNHVKITDFGLAKLLA 849 (1177)
T ss_pred HHHhcccchHHHHHHH--hhccccHHHHHHHHHHHHHHHHHHHhc---chhhhhhhhhheeecCCCeEEEEecchhhccC
Confidence 9999999999999985 455688899999999999999999999 99999999999999999999999999999875
Q ss_pred CCCCcee-eeEecccceeCccccccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCccHHHHHHHhccccccccccCcccc
Q 002278 770 TAMPHAS-TFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKADDNTVMEAVDPEVS 847 (943)
Q Consensus 770 ~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 847 (943)
....... ....-.+.|||-|.+....|+.++|||||||++||++| |..|+++....+ +-.......++.. +|
T Consensus 850 ~d~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~e-I~dlle~geRLsq--Pp--- 923 (1177)
T KOG1025|consen 850 PDEKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEE-IPDLLEKGERLSQ--PP--- 923 (1177)
T ss_pred cccccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHH-hhHHHhccccCCC--CC---
Confidence 5432221 11223578999999999999999999999999999999 999998754322 1111111111111 11
Q ss_pred cCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcCCCCCC
Q 002278 848 VTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLVSLLPAPPA 893 (943)
Q Consensus 848 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~~~~~~~~ 893 (943)
-....++.++.+||..|++.||+++++...+.++...+..
T Consensus 924 ------iCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ardpqr 963 (1177)
T KOG1025|consen 924 ------ICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMARDPQR 963 (1177)
T ss_pred ------CccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhcCcce
Confidence 1234677899999999999999999999998877655443
No 251
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=1.5e-34 Score=313.78 Aligned_cols=261 Identities=24% Similarity=0.297 Sum_probs=203.1
Q ss_pred hccccceEEeeeceEEEEEEEec-CCceEEEEEecccC--cccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEE
Q 002278 616 ENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQY--PHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYD 692 (943)
Q Consensus 616 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 692 (943)
++|+....||+|+||.||+|..+ +++.||+|++.... ....+.+.+|+++++.++||||+++++++..+...++|||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e 80 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE 80 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence 36888899999999999999987 57899999886442 2234567899999999999999999999999999999999
Q ss_pred EccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCC
Q 002278 693 YMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAM 772 (943)
Q Consensus 693 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~ 772 (943)
|++++.+..+.. ....+++..+..++.|++.||+|||+. +++||||||+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~~l~~~~~---~~~~~~~~~~~~~~~ql~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~ 154 (286)
T cd07847 81 YCDHTVLNELEK---NPRGVPEHLIKKIIWQTLQAVNFCHKH---NCIHRDVKPENILITKQGQIKLCDFGFARILTGPG 154 (286)
T ss_pred ccCccHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCChhhEEEcCCCcEEECccccceecCCCc
Confidence 999998888765 334689999999999999999999998 99999999999999999999999999998765432
Q ss_pred CceeeeEecccceeCcccccc-CCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhcccccccc-----------
Q 002278 773 PHASTFVLGTIGYIDPEYAHT-SRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVME----------- 840 (943)
Q Consensus 773 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~----------- 840 (943)
. ......++..|+|||++.+ ..++.++|||||||++|||++|+.||.+...................
T Consensus 155 ~-~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (286)
T cd07847 155 D-DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQF 233 (286)
T ss_pred c-cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccccc
Confidence 2 1222347889999999876 45789999999999999999999999876654433322111100000
Q ss_pred ---ccCcccccCcc----CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002278 841 ---AVDPEVSVTCV----DLSAVRKTFQLALLCTKRYPSERPTMQEVARV 883 (943)
Q Consensus 841 ---~~~~~~~~~~~----~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~ 883 (943)
...+....... .......+.+++.+|++.+|++||++.|++.|
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~ 283 (286)
T cd07847 234 FKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEH 283 (286)
T ss_pred cccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcC
Confidence 00000000000 00113567799999999999999999999876
No 252
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=9e-35 Score=315.53 Aligned_cols=263 Identities=24% Similarity=0.327 Sum_probs=206.1
Q ss_pred HHHHHHHhhccccceEEeeeceEEEEEEEec-CCceEEEEEecccCcccHHHHHHHHHHHhcC-CCCCcceeeeEEe---
Q 002278 608 FDDIMRSTENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQYPHNLREFETELETIGSI-RHRNIVSLHGYAL--- 682 (943)
Q Consensus 608 ~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~--- 682 (943)
++.+.++.++|+..+.||+|+||.||+|..+ .++.+|+|++... ......+.+|+.+++.+ +||||+++++++.
T Consensus 10 ~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~-~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~ 88 (286)
T cd06638 10 FDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPI-HDIDEEIEAEYNILKALSDHPNVVKFYGMYYKKD 88 (286)
T ss_pred eecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccc-cchHHHHHHHHHHHHHHhcCCCeeeeeeeeeecc
Confidence 4556678899999999999999999999876 4688999987543 22346678899999999 6999999999884
Q ss_pred --cCCcceEEEEEccCCChhhhccCC-CCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceee
Q 002278 683 --SPYGNLLFYDYMVNGSLWDLLHGP-SKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHL 759 (943)
Q Consensus 683 --~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl 759 (943)
.++..++||||+++++|.+++... .....+++..+..++.|++.|+.|||+. +++||||||+||++++++.+||
T Consensus 89 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~~kl 165 (286)
T cd06638 89 VKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVN---KTIHRDVKGNNILLTTEGGVKL 165 (286)
T ss_pred cCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhC---CccccCCCHHhEEECCCCCEEE
Confidence 334579999999999999987532 1334688999999999999999999999 9999999999999999999999
Q ss_pred cccccccccCCCCCceeeeEecccceeCcccccc-----CCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhcc
Q 002278 760 SDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHT-----SRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKAD 834 (943)
Q Consensus 760 ~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~ 834 (943)
+|||+++........ .....|++.|+|||++.. ..++.++||||+||++|||++|+.||...............
T Consensus 166 ~dfg~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~ 244 (286)
T cd06638 166 VDFGVSAQLTSTRLR-RNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALFKIPRN 244 (286)
T ss_pred ccCCceeecccCCCc-cccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhhcccc
Confidence 999999876433222 223458999999998753 45788999999999999999999999876544433221111
Q ss_pred ccccccccCcccccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 002278 835 DNTVMEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLV 885 (943)
Q Consensus 835 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~ 885 (943)
.......+.. ....+.+++.+||+.||++|||+.|++++.+
T Consensus 245 --~~~~~~~~~~--------~~~~~~~li~~~l~~~p~~Rps~~ell~~~~ 285 (286)
T cd06638 245 --PPPTLHQPEL--------WSNEFNDFIRKCLTKDYEKRPTVSDLLQHVF 285 (286)
T ss_pred --CCCcccCCCC--------cCHHHHHHHHHHccCCcccCCCHHHHhhccc
Confidence 1011111111 1245778999999999999999999998753
No 253
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=2.3e-34 Score=307.99 Aligned_cols=250 Identities=24% Similarity=0.392 Sum_probs=193.1
Q ss_pred eEEeeeceEEEEEEEecC----CceEEEEEecccC-cccHHHHHHHHHHHhcCCCCCcceeeeEEe-cCCcceEEEEEcc
Q 002278 622 YIVGYGASSTVYKCALKN----SRPIAVKKLYNQY-PHNLREFETELETIGSIRHRNIVSLHGYAL-SPYGNLLFYDYMV 695 (943)
Q Consensus 622 ~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~-~~~~~~lv~e~~~ 695 (943)
+.||+|+||.||+|.+.+ ...||+|++.... ....+.+.+|+.+++.++||||+++++++. .++..+++|||++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~ 80 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK 80 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence 358999999999998642 3568999875432 334567888999999999999999999876 4556789999999
Q ss_pred CCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCC--
Q 002278 696 NGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMP-- 773 (943)
Q Consensus 696 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~-- 773 (943)
+|+|.+++... ....++..+..++.|++.|++|||+. +++||||||+||++++++.+||+|||+++.......
T Consensus 81 ~~~L~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~ 155 (262)
T cd05058 81 HGDLRNFIRSE--THNPTVKDLIGFGLQVAKGMEYLASK---KFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYS 155 (262)
T ss_pred CCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCccccccccCCccee
Confidence 99999998632 33467888899999999999999998 999999999999999999999999999976533211
Q ss_pred -ceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhC-CCCCCCCccHHHHHHHhccccccccccCcccccCcc
Q 002278 774 -HASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTG-KKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCV 851 (943)
Q Consensus 774 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 851 (943)
.......++..|+|||...+..++.++|||||||++|||++| .+||....... ........... ....
T Consensus 156 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~-~~~~~~~~~~~------~~~~--- 225 (262)
T cd05058 156 VHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFD-ITVYLLQGRRL------LQPE--- 225 (262)
T ss_pred ecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHH-HHHHHhcCCCC------CCCC---
Confidence 111123357789999999888999999999999999999995 56666544332 22222111111 0010
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcC
Q 002278 852 DLSAVRKTFQLALLCTKRYPSERPTMQEVARVLVSLL 888 (943)
Q Consensus 852 ~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~~~ 888 (943)
..+..+.+++..||+.+|++||++.++++.++.+.
T Consensus 226 --~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~ 260 (262)
T cd05058 226 --YCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIF 260 (262)
T ss_pred --cCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHh
Confidence 11246779999999999999999999999998754
No 254
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=2.3e-34 Score=316.47 Aligned_cols=262 Identities=24% Similarity=0.378 Sum_probs=205.5
Q ss_pred HhhccccceEEeeeceEEEEEEEec--------CCceEEEEEecccC-cccHHHHHHHHHHHhcC-CCCCcceeeeEEec
Q 002278 614 STENLSEKYIVGYGASSTVYKCALK--------NSRPIAVKKLYNQY-PHNLREFETELETIGSI-RHRNIVSLHGYALS 683 (943)
Q Consensus 614 ~~~~~~~~~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 683 (943)
..++|...+.||+|+||.||+|... ....+|+|.+.... ......+.+|+++++++ +||||+++++++..
T Consensus 10 ~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 89 (314)
T cd05099 10 PRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQ 89 (314)
T ss_pred cHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEcc
Confidence 3468889999999999999999752 23568889876443 23456788999999999 59999999999999
Q ss_pred CCcceEEEEEccCCChhhhccCCC-------------CCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEE
Q 002278 684 PYGNLLFYDYMVNGSLWDLLHGPS-------------KKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNIL 750 (943)
Q Consensus 684 ~~~~~lv~e~~~~g~L~~~l~~~~-------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nil 750 (943)
....+++|||+++|+|.+++.... ....+++.++..++.|++.||+|||++ +++||||||+||+
T Consensus 90 ~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~Nil 166 (314)
T cd05099 90 EGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESR---RCIHRDLAARNVL 166 (314)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHC---CeeeccccceeEE
Confidence 888999999999999999986422 124588999999999999999999999 9999999999999
Q ss_pred ECCCCceeecccccccccCCCCCce-eeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCccHHHH
Q 002278 751 IDENFDAHLSDFGIARCIPTAMPHA-STFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQL 828 (943)
Q Consensus 751 l~~~~~~kl~DFGla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~p~~~~~~~~~~ 828 (943)
++.++.+||+|||.++......... .....++..|+|||++.+..++.++|||||||++|||++ |..||.........
T Consensus 167 l~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~ 246 (314)
T cd05099 167 VTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEELF 246 (314)
T ss_pred EcCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHHHHH
Confidence 9999999999999998664322111 111224467999999998889999999999999999999 89999765432222
Q ss_pred HHHhccccccccccCcccccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcCCC
Q 002278 829 IMSKADDNTVMEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLVSLLPA 890 (943)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~~~~~ 890 (943)
........ ..... .....+.+++.+|++.+|++|||+.++++.|+.+...
T Consensus 247 -~~~~~~~~------~~~~~-----~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~ 296 (314)
T cd05099 247 -KLLREGHR------MDKPS-----NCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLAA 296 (314)
T ss_pred -HHHHcCCC------CCCCC-----CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHH
Confidence 22211110 01111 1124677899999999999999999999999877543
No 255
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.1e-34 Score=329.75 Aligned_cols=259 Identities=17% Similarity=0.208 Sum_probs=196.2
Q ss_pred hhccccceEEeeeceEEEEEEEecC-CceEEEEEecccCcccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEE
Q 002278 615 TENLSEKYIVGYGASSTVYKCALKN-SRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDY 693 (943)
Q Consensus 615 ~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 693 (943)
...|.+.+.||+|+||.||+|.+.. ++.||||... ...+.+|++++++++|||||++++++...+..++|||+
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~------~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~ 241 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW------YASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPK 241 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc------ccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEc
Confidence 4478899999999999999999764 6889999642 23467899999999999999999999999999999999
Q ss_pred ccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCC
Q 002278 694 MVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMP 773 (943)
Q Consensus 694 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~ 773 (943)
+ .++|.+++.. ....+++.+++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++.......
T Consensus 242 ~-~~~L~~~l~~--~~~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~ 315 (461)
T PHA03211 242 Y-RSDLYTYLGA--RLRPLGLAQVTAVARQLLSAIDYIHGE---GIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWS 315 (461)
T ss_pred c-CCCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHC---CEEECcCCHHHEEECCCCCEEEcccCCceecccccc
Confidence 9 4788888753 234699999999999999999999999 999999999999999999999999999987643221
Q ss_pred c-eeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCc------c-HHHHHHHhccccccccccC--
Q 002278 774 H-ASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNES------N-LHQLIMSKADDNTVMEAVD-- 843 (943)
Q Consensus 774 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~------~-~~~~~~~~~~~~~~~~~~~-- 843 (943)
. ......||+.|+|||++.+..++.++|||||||++|||++|..|+.... . ..+...+..........+.
T Consensus 316 ~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~ 395 (461)
T PHA03211 316 TPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQH 395 (461)
T ss_pred cccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCC
Confidence 1 1223469999999999999999999999999999999999876553211 1 1112222111111000000
Q ss_pred ------------------cccccC-cc-CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 002278 844 ------------------PEVSVT-CV-DLSAVRKTFQLALLCTKRYPSERPTMQEVARVLV 885 (943)
Q Consensus 844 ------------------~~~~~~-~~-~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~ 885 (943)
+..... +. .......+.+++.+|++.||++|||+.|+++|-+
T Consensus 396 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~hp~ 457 (461)
T PHA03211 396 AGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRLPL 457 (461)
T ss_pred cchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhCcc
Confidence 000000 00 0011135678999999999999999999999843
No 256
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=1.4e-34 Score=315.29 Aligned_cols=249 Identities=22% Similarity=0.320 Sum_probs=203.2
Q ss_pred cceEEeeeceEEEEEEEec-CCceEEEEEecccCcccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEEccCCC
Q 002278 620 EKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGS 698 (943)
Q Consensus 620 ~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 698 (943)
....||+|+||.||+|... +++.||+|.+........+.+.+|+.+++.++||||+++++++..++..+++|||+++++
T Consensus 25 ~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~ 104 (297)
T cd06659 25 NYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGA 104 (297)
T ss_pred hhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCC
Confidence 3446999999999999975 578999999865544556678899999999999999999999999999999999999999
Q ss_pred hhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCCceeee
Q 002278 699 LWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTF 778 (943)
Q Consensus 699 L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~ 778 (943)
|.+++. ...+++.++..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++......... ...
T Consensus 105 L~~~~~----~~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~~-~~~ 176 (297)
T cd06659 105 LTDIVS----QTRLNEEQIATVCESVLQALCYLHSQ---GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPK-RKS 176 (297)
T ss_pred HHHHHh----hcCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHeEEccCCcEEEeechhHhhccccccc-ccc
Confidence 999874 24589999999999999999999999 9999999999999999999999999999765433222 223
Q ss_pred EecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccccCccCHHHHHH
Q 002278 779 VLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAVRK 858 (943)
Q Consensus 779 ~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 858 (943)
..|+..|+|||++.+..++.++|||||||++|||++|+.||................... ....+ .....
T Consensus 177 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~---------~~~~~ 246 (297)
T cd06659 177 LVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPK-LKNAH---------KISPV 246 (297)
T ss_pred eecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhccCCCC-ccccC---------CCCHH
Confidence 568999999999998899999999999999999999999998665544333222111100 00011 11245
Q ss_pred HHHHHHHccCCCCCCCCCHHHHHHHHhh
Q 002278 859 TFQLALLCTKRYPSERPTMQEVARVLVS 886 (943)
Q Consensus 859 l~~l~~~cl~~dP~~RPt~~el~~~L~~ 886 (943)
+.+++..|++.+|++||++.+++++-+-
T Consensus 247 l~~~i~~~l~~~P~~Rps~~~ll~~~~~ 274 (297)
T cd06659 247 LRDFLERMLTREPQERATAQELLDHPFL 274 (297)
T ss_pred HHHHHHHHhcCCcccCcCHHHHhhChhh
Confidence 6789999999999999999999997543
No 257
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=1.5e-34 Score=309.01 Aligned_cols=238 Identities=23% Similarity=0.322 Sum_probs=188.4
Q ss_pred EEeeeceEEEEEEEecC-------------CceEEEEEecccCcccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceE
Q 002278 623 IVGYGASSTVYKCALKN-------------SRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLL 689 (943)
Q Consensus 623 ~lG~G~~g~Vy~~~~~~-------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 689 (943)
.||+|+||.||+|.... ...||+|.+..........+..|+.+++.++||||+++++++..+...++
T Consensus 2 ~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~l 81 (262)
T cd05077 2 HLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENIM 81 (262)
T ss_pred ccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCEE
Confidence 58999999999998532 22578888765544455678889999999999999999999999999999
Q ss_pred EEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCc-------eeeccc
Q 002278 690 FYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFD-------AHLSDF 762 (943)
Q Consensus 690 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~-------~kl~DF 762 (943)
||||+++|+|..++.. ....+++..+.+++.||++|++|||+. +|+||||||+||+++.++. ++++||
T Consensus 82 v~e~~~~~~l~~~~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~ 156 (262)
T cd05077 82 VEEFVEFGPLDLFMHR--KSDVLTTPWKFKVAKQLASALSYLEDK---DLVHGNVCTKNILLAREGIDGECGPFIKLSDP 156 (262)
T ss_pred EEecccCCCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHhhhC---CeECCCCCcccEEEecCCccCCCCceeEeCCC
Confidence 9999999999988863 234689999999999999999999999 9999999999999986654 899999
Q ss_pred ccccccCCCCCceeeeEecccceeCccccc-cCCCCCcchhhhHHHHHHHHH-hCCCCCCCCccHHHHHHHhcccccccc
Q 002278 763 GIARCIPTAMPHASTFVLGTIGYIDPEYAH-TSRLNEKSDVYSFGIVLLEIL-TGKKAVDNESNLHQLIMSKADDNTVME 840 (943)
Q Consensus 763 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwSlGvil~ell-tG~~p~~~~~~~~~~~~~~~~~~~~~~ 840 (943)
|++...... ....|+..|+|||.+. +..++.++|||||||++|||+ +|+.||......+. ........ .
T Consensus 157 g~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~-~~~~~~~~---~ 227 (262)
T cd05077 157 GIPITVLSR-----QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEK-ERFYEGQC---M 227 (262)
T ss_pred CCCccccCc-----ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHH-HHHHhcCc---c
Confidence 998755322 2234788999999887 466899999999999999998 58888875432221 11111100 0
Q ss_pred ccCcccccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 002278 841 AVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVL 884 (943)
Q Consensus 841 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L 884 (943)
... .....+.+++.+||+.||++||++.++++++
T Consensus 228 ~~~----------~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 228 LVT----------PSCKELADLMTHCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred CCC----------CChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence 000 0124577899999999999999999999876
No 258
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=2.4e-34 Score=314.09 Aligned_cols=262 Identities=23% Similarity=0.256 Sum_probs=203.5
Q ss_pred ccccceEEeeeceEEEEEEEec-CCceEEEEEecccCcc-----cHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEE
Q 002278 617 NLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQYPH-----NLREFETELETIGSIRHRNIVSLHGYALSPYGNLLF 690 (943)
Q Consensus 617 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-----~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 690 (943)
+|+..+.||+|+||.||+|..+ +++.||+|++...... ....+..|+++++.++|+||+++++++.+....++|
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence 4777889999999999999976 5789999998654322 344567899999999999999999999998899999
Q ss_pred EEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCC
Q 002278 691 YDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPT 770 (943)
Q Consensus 691 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~ 770 (943)
|||+ +|+|.+++.... ..+++..+..++.|+++||+|||++ +|+||||||+||+++.++.++|+|||+++....
T Consensus 81 ~e~~-~~~L~~~i~~~~--~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~ 154 (298)
T cd07841 81 FEFM-ETDLEKVIKDKS--IVLTPADIKSYMLMTLRGLEYLHSN---WILHRDLKPNNLLIASDGVLKLADFGLARSFGS 154 (298)
T ss_pred Eccc-CCCHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCChhhEEEcCCCCEEEccceeeeeccC
Confidence 9999 999999996422 3689999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCceeeeEecccceeCcccccc-CCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCc-----
Q 002278 771 AMPHASTFVLGTIGYIDPEYAHT-SRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDP----- 844 (943)
Q Consensus 771 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~----- 844 (943)
..... ....+++.|+|||.+.+ ..++.++|||||||++|||++|.+||........................+
T Consensus 155 ~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (298)
T cd07841 155 PNRKM-THQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSL 233 (298)
T ss_pred CCccc-cccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhcccc
Confidence 32221 22346788999998865 467899999999999999999988888766554433322111110000000
Q ss_pred ----------ccccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 002278 845 ----------EVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLV 885 (943)
Q Consensus 845 ----------~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~ 885 (943)
..............+.+++.+||+++|++|||+.|++++-+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~~~ 284 (298)
T cd07841 234 PDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEHPY 284 (298)
T ss_pred cccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhCcc
Confidence 00000000112356789999999999999999999999743
No 259
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=3.1e-34 Score=307.38 Aligned_cols=252 Identities=26% Similarity=0.401 Sum_probs=203.6
Q ss_pred ccccceEEeeeceEEEEEEEec-CCceEEEEEecccCcc--cHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEE
Q 002278 617 NLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQYPH--NLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDY 693 (943)
Q Consensus 617 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 693 (943)
+|+..+.||+|+||.||+|... +++.||+|.+...... ..+.+.+|+++++.++|+||+++++++...+..++|+||
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY 80 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence 4778899999999999999865 6789999998655432 567889999999999999999999999999999999999
Q ss_pred ccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCC
Q 002278 694 MVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMP 773 (943)
Q Consensus 694 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~ 773 (943)
+++++|.+++. ....+++..+..++.+++.|++|||+. +++|+||+|+||++++++.+||+|||++........
T Consensus 81 ~~~~~L~~~~~---~~~~~~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~ 154 (264)
T cd06626 81 CSGGTLEELLE---HGRILDEHVIRVYTLQLLEGLAYLHSH---GIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTT 154 (264)
T ss_pred CCCCcHHHHHh---hcCCCChHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEcccccccccCCCCC
Confidence 99999999986 334578999999999999999999999 999999999999999999999999999987654332
Q ss_pred ceee---eEecccceeCccccccCC---CCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccc
Q 002278 774 HAST---FVLGTIGYIDPEYAHTSR---LNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVS 847 (943)
Q Consensus 774 ~~~~---~~~gt~~y~aPE~~~~~~---~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 847 (943)
.... ...++..|+|||++.+.. ++.++||||||+++||+++|+.||................ ..+.++
T Consensus 155 ~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~~------~~~~~~ 228 (264)
T cd06626 155 TMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGAG------HKPPIP 228 (264)
T ss_pred cccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHhcC------CCCCCC
Confidence 2211 245788999999988766 8899999999999999999999997653322222221111 111111
Q ss_pred cCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002278 848 VTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARV 883 (943)
Q Consensus 848 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~ 883 (943)
.. ......+.+++..|++.+|++||++.+++.+
T Consensus 229 ~~---~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~ 261 (264)
T cd06626 229 DS---LQLSPEGKDFLDRCLESDPKKRPTASELLQH 261 (264)
T ss_pred cc---cccCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 10 0112456789999999999999999999875
No 260
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-35 Score=288.62 Aligned_cols=251 Identities=23% Similarity=0.333 Sum_probs=197.6
Q ss_pred cccceEEeeeceEEEEEEEecC-CceEEEEEecccC-cccHHHHHHHHHHHhcCC-CCCcceeeeEEecCCcceEEEEEc
Q 002278 618 LSEKYIVGYGASSTVYKCALKN-SRPIAVKKLYNQY-PHNLREFETELETIGSIR-HRNIVSLHGYALSPYGNLLFYDYM 694 (943)
Q Consensus 618 ~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~ 694 (943)
.+....||.|..|.||+++.+. +...|||.+.+.. .+..+++...++++.... +|+||+.+|||..+...++.||.|
T Consensus 94 l~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelM 173 (391)
T KOG0983|consen 94 LENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELM 173 (391)
T ss_pred hhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHH
Confidence 3445569999999999999875 6788999997654 344566777777766654 899999999999999999999987
Q ss_pred cCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCCc
Q 002278 695 VNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPH 774 (943)
Q Consensus 695 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~~ 774 (943)
......++++ -.+++++.-+-++...++.||.||.+++ +|+|||+||+|||+|+.|.+|+||||++-++-+...+
T Consensus 174 -s~C~ekLlkr--ik~piPE~ilGk~tva~v~AL~YLKeKH--~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSkAh 248 (391)
T KOG0983|consen 174 -STCAEKLLKR--IKGPIPERILGKMTVAIVKALYYLKEKH--GVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKAH 248 (391)
T ss_pred -HHHHHHHHHH--hcCCchHHhhhhhHHHHHHHHHHHHHhc--ceeecccCccceEEccCCCEEeecccccceeeccccc
Confidence 3455555553 3456888888899999999999999875 9999999999999999999999999999888665444
Q ss_pred eeeeEecccceeCcccccc---CCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccccCcc
Q 002278 775 ASTFVLGTIGYIDPEYAHT---SRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCV 851 (943)
Q Consensus 775 ~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 851 (943)
.. ..|-+.|||||.+.- ..|+.++||||||++++|+.||+.||.+...-.........+.+ ..+++...
T Consensus 249 tr--sAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln~eP--P~L~~~~g---- 320 (391)
T KOG0983|consen 249 TR--SAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLNEEP--PLLPGHMG---- 320 (391)
T ss_pred cc--ccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHhcCC--CCCCcccC----
Confidence 33 458899999998864 46899999999999999999999999865443333333333222 11221111
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 002278 852 DLSAVRKTFQLALLCTKRYPSERPTMQEVARVL 884 (943)
Q Consensus 852 ~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L 884 (943)
....+.+++..|+++|+.+||.+.++++|-
T Consensus 321 ---FSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h~ 350 (391)
T KOG0983|consen 321 ---FSPDFQSFVKDCLTKDHRKRPKYNKLLEHP 350 (391)
T ss_pred ---cCHHHHHHHHHHhhcCcccCcchHHHhcCc
Confidence 224677899999999999999999999874
No 261
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=2.5e-34 Score=306.95 Aligned_cols=248 Identities=24% Similarity=0.346 Sum_probs=202.8
Q ss_pred ccccceEEeeeceEEEEEEEec-CCceEEEEEecccC-----cccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEE
Q 002278 617 NLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQY-----PHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLF 690 (943)
Q Consensus 617 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 690 (943)
+|+..+.||+|+||.||+|..+ +++.||+|.+.... .+..+.+.+|+++++.++||||+++++++.++...+++
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF 80 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence 4677789999999999999977 68899999885433 22456788999999999999999999999999999999
Q ss_pred EEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCC
Q 002278 691 YDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPT 770 (943)
Q Consensus 691 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~ 770 (943)
+||+++++|.+++. ....+++..+..++.|++.|++|||+. +++|+||+|+||+++.++.+||+|||.+.....
T Consensus 81 ~e~~~~~~L~~~~~---~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~ 154 (258)
T cd06632 81 LELVPGGSLAKLLK---KYGSFPEPVIRLYTRQILLGLEYLHDR---NTVHRDIKGANILVDTNGVVKLADFGMAKQVVE 154 (258)
T ss_pred EEecCCCcHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccceeccc
Confidence 99999999999986 334588999999999999999999999 999999999999999999999999999986543
Q ss_pred CCCceeeeEecccceeCccccccCC-CCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccccC
Q 002278 771 AMPHASTFVLGTIGYIDPEYAHTSR-LNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVT 849 (943)
Q Consensus 771 ~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 849 (943)
.. ......|+..|+|||.+.... ++.++|+|||||++|+|++|+.||................ ......+.+
T Consensus 155 ~~--~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~--~~~~~~~~~--- 227 (258)
T cd06632 155 FS--FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRSK--ELPPIPDHL--- 227 (258)
T ss_pred cc--cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHHHhcc--cCCCcCCCc---
Confidence 32 122345889999999987766 8999999999999999999999997665433333222111 111111111
Q ss_pred ccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002278 850 CVDLSAVRKTFQLALLCTKRYPSERPTMQEVARV 883 (943)
Q Consensus 850 ~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~ 883 (943)
...+.+++.+||+.+|++||++.+++++
T Consensus 228 ------~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 255 (258)
T cd06632 228 ------SDEAKDFILKCLQRDPSLRPTAAELLEH 255 (258)
T ss_pred ------CHHHHHHHHHHhhcCcccCcCHHHHhcC
Confidence 2456789999999999999999999876
No 262
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=2.9e-34 Score=318.46 Aligned_cols=262 Identities=24% Similarity=0.369 Sum_probs=206.4
Q ss_pred hccccceEEeeeceEEEEEEEecC--------CceEEEEEecccC-cccHHHHHHHHHHHhcC-CCCCcceeeeEEecCC
Q 002278 616 ENLSEKYIVGYGASSTVYKCALKN--------SRPIAVKKLYNQY-PHNLREFETELETIGSI-RHRNIVSLHGYALSPY 685 (943)
Q Consensus 616 ~~~~~~~~lG~G~~g~Vy~~~~~~--------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 685 (943)
.+|++.+.||+|+||.||+|.... ...||+|.+.... ....+++.+|+++++++ +||||+++++++...+
T Consensus 12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 91 (334)
T cd05100 12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 91 (334)
T ss_pred hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCC
Confidence 468889999999999999997531 2368999876433 33456788999999999 7999999999999999
Q ss_pred cceEEEEEccCCChhhhccCCC-------------CCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEEC
Q 002278 686 GNLLFYDYMVNGSLWDLLHGPS-------------KKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILID 752 (943)
Q Consensus 686 ~~~lv~e~~~~g~L~~~l~~~~-------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~ 752 (943)
..+++|||+++|+|.+++.... ....+++.++..++.|++.||+|||+. +++||||||+||+++
T Consensus 92 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~Nill~ 168 (334)
T cd05100 92 PLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQ---KCIHRDLAARNVLVT 168 (334)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEEEc
Confidence 9999999999999999986421 123588999999999999999999999 999999999999999
Q ss_pred CCCceeecccccccccCCCCCce-eeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCccHHHHHH
Q 002278 753 ENFDAHLSDFGIARCIPTAMPHA-STFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIM 830 (943)
Q Consensus 753 ~~~~~kl~DFGla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~ 830 (943)
+++.+||+|||+++......... .....++..|+|||++.+..++.++|||||||++|||++ |..||.+.... ....
T Consensus 169 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~-~~~~ 247 (334)
T cd05100 169 EDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVE-ELFK 247 (334)
T ss_pred CCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHH-HHHH
Confidence 99999999999998664322111 111224568999999999999999999999999999998 88998765432 2222
Q ss_pred HhccccccccccCcccccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcCCCCC
Q 002278 831 SKADDNTVMEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLVSLLPAPP 892 (943)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~~~~~~~ 892 (943)
....... +.... .....+.+++.+|++.+|++||++.++++.|+.+.....
T Consensus 248 ~~~~~~~------~~~~~-----~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~~~~ 298 (334)
T cd05100 248 LLKEGHR------MDKPA-----NCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLTVTS 298 (334)
T ss_pred HHHcCCC------CCCCC-----CCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhhhcC
Confidence 2211111 11111 112467799999999999999999999999998875443
No 263
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=1.1e-34 Score=312.34 Aligned_cols=238 Identities=21% Similarity=0.323 Sum_probs=187.5
Q ss_pred EEeeeceEEEEEEEecC-------------------------CceEEEEEecccCcccHHHHHHHHHHHhcCCCCCccee
Q 002278 623 IVGYGASSTVYKCALKN-------------------------SRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSL 677 (943)
Q Consensus 623 ~lG~G~~g~Vy~~~~~~-------------------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 677 (943)
.||+|+||.||+|.... ...||+|.+.........++.+|+.+++.++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 58999999999997521 13578888865444445678889999999999999999
Q ss_pred eeEEecCCcceEEEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCC--
Q 002278 678 HGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENF-- 755 (943)
Q Consensus 678 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~-- 755 (943)
++++..+...++||||+++|+|.+++.. ....+++..+..++.|+++||+|||++ +|+||||||+||++++.+
T Consensus 82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~Nill~~~~~~ 156 (274)
T cd05076 82 HGVCVRGSENIMVEEFVEHGPLDVCLRK--EKGRVPVAWKITVAQQLASALSYLEDK---NLVHGNVCAKNILLARLGLA 156 (274)
T ss_pred EEEEEeCCceEEEEecCCCCcHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHcC---CccCCCCCcccEEEeccCcc
Confidence 9999999999999999999999998863 245688999999999999999999998 999999999999997543
Q ss_pred -----ceeecccccccccCCCCCceeeeEecccceeCcccccc-CCCCCcchhhhHHHHHHHHH-hCCCCCCCCccHHHH
Q 002278 756 -----DAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHT-SRLNEKSDVYSFGIVLLEIL-TGKKAVDNESNLHQL 828 (943)
Q Consensus 756 -----~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~ell-tG~~p~~~~~~~~~~ 828 (943)
.+|++|||.+...... ....++..|+|||.+.+ ..++.++|||||||++||++ +|+.||.........
T Consensus 157 ~~~~~~~kl~d~g~~~~~~~~-----~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~ 231 (274)
T cd05076 157 EGTSPFIKLSDPGVSFTALSR-----EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEKE 231 (274)
T ss_pred cCccceeeecCCccccccccc-----cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHHH
Confidence 3899999998644222 11247888999998875 56899999999999999995 699999765433221
Q ss_pred HHHhccccccccccCcccccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 002278 829 IMSKADDNTVMEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVL 884 (943)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L 884 (943)
.. .......+. . ....+.+++.+||+.+|++|||+.++++.|
T Consensus 232 ~~-~~~~~~~~~--------~-----~~~~~~~li~~cl~~~p~~Rps~~~il~~L 273 (274)
T cd05076 232 RF-YEKKHRLPE--------P-----SCKELATLISQCLTYEPTQRPSFRTILRDL 273 (274)
T ss_pred HH-HHhccCCCC--------C-----CChHHHHHHHHHcccChhhCcCHHHHHHhh
Confidence 11 111111110 0 013577899999999999999999999876
No 264
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=9.3e-35 Score=313.73 Aligned_cols=250 Identities=24% Similarity=0.359 Sum_probs=202.5
Q ss_pred hccccceEEeeeceEEEEEEEec-CCceEEEEEecccC-cccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEE
Q 002278 616 ENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQY-PHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDY 693 (943)
Q Consensus 616 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 693 (943)
+.|+..+.||+|+||.||+|.+. +++.||+|.+.... ....+.+.+|++++++++||||+++++++..+...++||||
T Consensus 4 ~~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (277)
T cd06642 4 ELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEY 83 (277)
T ss_pred HHHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEc
Confidence 34566677999999999999875 46789999876433 33456788999999999999999999999999999999999
Q ss_pred ccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCC
Q 002278 694 MVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMP 773 (943)
Q Consensus 694 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~ 773 (943)
+++++|.+++. ...+++..+..++.|++.|++|||+. +++|+||+|+||++++++.++++|||++........
T Consensus 84 ~~~~~L~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~---~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~ 156 (277)
T cd06642 84 LGGGSALDLLK----PGPLEETYIATILREILKGLDYLHSE---RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI 156 (277)
T ss_pred cCCCcHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHhcC---CeeccCCChheEEEeCCCCEEEccccccccccCcch
Confidence 99999999885 34689999999999999999999998 999999999999999999999999999987644322
Q ss_pred ceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccccCccCH
Q 002278 774 HASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDL 853 (943)
Q Consensus 774 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 853 (943)
......|+..|+|||++.+..++.++|||||||++|||+||+.||............. ....+.+..
T Consensus 157 -~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~-------~~~~~~~~~----- 223 (277)
T cd06642 157 -KRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIP-------KNSPPTLEG----- 223 (277)
T ss_pred -hhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHhhhh-------cCCCCCCCc-----
Confidence 1222457889999999999899999999999999999999999997544332221111 111111111
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 002278 854 SAVRKTFQLALLCTKRYPSERPTMQEVARVLV 885 (943)
Q Consensus 854 ~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~ 885 (943)
.....+.+++.+|++.+|++||++.+++++-+
T Consensus 224 ~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~ 255 (277)
T cd06642 224 QYSKPFKEFVEACLNKDPRFRPTAKELLKHKF 255 (277)
T ss_pred ccCHHHHHHHHHHccCCcccCcCHHHHHHhHH
Confidence 12346778999999999999999999999754
No 265
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=1.5e-34 Score=314.32 Aligned_cols=247 Identities=20% Similarity=0.240 Sum_probs=204.2
Q ss_pred hccccceEEeeeceEEEEEEEec-CCceEEEEEecccC---cccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEE
Q 002278 616 ENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQY---PHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFY 691 (943)
Q Consensus 616 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 691 (943)
++|+..+.||+|+||.||+|.+. +++.||+|.+.... ....+.+.+|++++++++||||+++++++.++...++||
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence 36888999999999999999976 57899999886432 234566889999999999999999999999999999999
Q ss_pred EEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCC
Q 002278 692 DYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTA 771 (943)
Q Consensus 692 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~ 771 (943)
||+++++|.+++.. ...+++..+..++.|++.||+|||+. +++||||+|+||+++.++.+||+|||+++.....
T Consensus 81 e~~~~~~L~~~~~~---~~~l~~~~~~~~~~qil~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~ 154 (290)
T cd05580 81 EYVPGGELFSHLRK---SGRFPEPVARFYAAQVVLALEYLHSL---DIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR 154 (290)
T ss_pred ecCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEeeCCCccccCCC
Confidence 99999999999863 35689999999999999999999998 9999999999999999999999999999876543
Q ss_pred CCceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccccCcc
Q 002278 772 MPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCV 851 (943)
Q Consensus 772 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 851 (943)
.....|++.|+|||.+.+...+.++||||||+++|+|++|+.||...................+ +.+
T Consensus 155 ----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~----~~~----- 221 (290)
T cd05580 155 ----TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILEGKVRFP----SFF----- 221 (290)
T ss_pred ----CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCccCC----ccC-----
Confidence 2234588999999999888899999999999999999999999986653332222221111111 111
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHHHh
Q 002278 852 DLSAVRKTFQLALLCTKRYPSERP-----TMQEVARVLV 885 (943)
Q Consensus 852 ~~~~~~~l~~l~~~cl~~dP~~RP-----t~~el~~~L~ 885 (943)
...+.+++.+||..+|++|| +++|++++-+
T Consensus 222 ----~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~~~ 256 (290)
T cd05580 222 ----SPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHPW 256 (290)
T ss_pred ----CHHHHHHHHHHccCCHHHccCcccCCHHHHHcCcc
Confidence 24667899999999999999 8888887643
No 266
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=5e-35 Score=312.24 Aligned_cols=238 Identities=22% Similarity=0.332 Sum_probs=188.8
Q ss_pred EEeeeceEEEEEEEecC--------CceEEEEEecccCcccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEEc
Q 002278 623 IVGYGASSTVYKCALKN--------SRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYM 694 (943)
Q Consensus 623 ~lG~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 694 (943)
.||+|+||.||+|..+. ..+||+|.+........+.+..|+.+++.++||||+++++++..++..++||||+
T Consensus 2 ~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~ 81 (258)
T cd05078 2 SLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEYV 81 (258)
T ss_pred CCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEecC
Confidence 58999999999998642 2347888775544445567888999999999999999999999999999999999
Q ss_pred cCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCc--------eeeccccccc
Q 002278 695 VNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFD--------AHLSDFGIAR 766 (943)
Q Consensus 695 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~--------~kl~DFGla~ 766 (943)
++|+|.++++.. ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++. ++++|||.+.
T Consensus 82 ~~g~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~ 156 (258)
T cd05078 82 KFGSLDTYLKKN--KNLINISWKLEVAKQLAWALHFLEDK---GLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISI 156 (258)
T ss_pred CCCcHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEEecccccccCCCceEEeccccccc
Confidence 999999999743 33689999999999999999999999 9999999999999987765 6999999987
Q ss_pred ccCCCCCceeeeEecccceeCccccccC-CCCCcchhhhHHHHHHHHHhCC-CCCCCCccHHHHHHHhccccccccccCc
Q 002278 767 CIPTAMPHASTFVLGTIGYIDPEYAHTS-RLNEKSDVYSFGIVLLEILTGK-KAVDNESNLHQLIMSKADDNTVMEAVDP 844 (943)
Q Consensus 767 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvil~elltG~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 844 (943)
..... ....++..|+|||++.+. .++.++|||||||++|||++|. .||......... ........
T Consensus 157 ~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~-~~~~~~~~------- 223 (258)
T cd05078 157 TVLPK-----EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKL-QFYEDRHQ------- 223 (258)
T ss_pred ccCCc-----hhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHH-HHHHcccc-------
Confidence 54322 223578899999999874 5789999999999999999985 666544332221 11111111
Q ss_pred ccccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 002278 845 EVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVL 884 (943)
Q Consensus 845 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L 884 (943)
++. ....++.+++..||+.+|++|||++++++.|
T Consensus 224 -~~~-----~~~~~~~~li~~~l~~~p~~Rps~~~il~~l 257 (258)
T cd05078 224 -LPA-----PKWTELANLINQCMDYEPDFRPSFRAIIRDL 257 (258)
T ss_pred -CCC-----CCcHHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 110 0124577999999999999999999999876
No 267
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=4.1e-34 Score=304.00 Aligned_cols=247 Identities=28% Similarity=0.404 Sum_probs=199.0
Q ss_pred eEEeeeceEEEEEEEecCCceEEEEEecccCcc-cHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEEccCCChh
Q 002278 622 YIVGYGASSTVYKCALKNSRPIAVKKLYNQYPH-NLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLW 700 (943)
Q Consensus 622 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~ 700 (943)
+.||+|+||.||+|.+.+++.||+|++...... ....+.+|++++++++||||+++++++.+....++||||+++++|.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~ 80 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLL 80 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHH
Confidence 368999999999999877899999988765433 4567899999999999999999999999999999999999999999
Q ss_pred hhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCCcee-eeE
Q 002278 701 DLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHAS-TFV 779 (943)
Q Consensus 701 ~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~~~~-~~~ 779 (943)
+++... ...+++..+..++.+++.|++|||+. +++||||||+||+++.++.+||+|||.++.......... ...
T Consensus 81 ~~l~~~--~~~~~~~~~~~~~~~~~~~l~~lH~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~ 155 (251)
T cd05041 81 TFLRKK--KNRLTVKKLLQMSLDAAAGMEYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLK 155 (251)
T ss_pred HHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CEehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccC
Confidence 998632 34678999999999999999999999 999999999999999999999999999986542211111 112
Q ss_pred ecccceeCccccccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCccHHHHHHHhccccccccccCcccccCccCHHHHHH
Q 002278 780 LGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAVRK 858 (943)
Q Consensus 780 ~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 858 (943)
.++..|+|||.+.+..++.++|||||||++|||+| |..||............... ... ..+ ......
T Consensus 156 ~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~~-~~~------~~~-----~~~~~~ 223 (251)
T cd05041 156 QIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESG-YRM------PAP-----QLCPEE 223 (251)
T ss_pred cceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhcC-CCC------CCC-----ccCCHH
Confidence 23567999999998899999999999999999999 88998765433222211111 100 000 012246
Q ss_pred HHHHHHHccCCCCCCCCCHHHHHHHHh
Q 002278 859 TFQLALLCTKRYPSERPTMQEVARVLV 885 (943)
Q Consensus 859 l~~l~~~cl~~dP~~RPt~~el~~~L~ 885 (943)
+.+++.+|+..+|++|||+.|+++.|.
T Consensus 224 ~~~li~~~l~~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 224 IYRLMLQCWAYDPENRPSFSEIYNELQ 250 (251)
T ss_pred HHHHHHHHhccChhhCcCHHHHHHHhh
Confidence 788999999999999999999999875
No 268
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=2.7e-34 Score=310.13 Aligned_cols=251 Identities=23% Similarity=0.348 Sum_probs=205.8
Q ss_pred hccccceEEeeeceEEEEEEEec-CCceEEEEEecccC-cccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEE
Q 002278 616 ENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQY-PHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDY 693 (943)
Q Consensus 616 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 693 (943)
..|+..+.||+|+||.||+|.++ .+..||+|.+.... ......+.+|+++++++.||||+++++++.++...++||||
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEY 83 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEec
Confidence 45777788999999999999976 47889999876432 33456788999999999999999999999999999999999
Q ss_pred ccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCC
Q 002278 694 MVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMP 773 (943)
Q Consensus 694 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~ 773 (943)
+++|+|.+++. ...+++.++..++.|++.|++|||+. +++|+||+|+||+++.++.++++|||++........
T Consensus 84 ~~~~~L~~~i~----~~~l~~~~~~~~~~~l~~~l~~lh~~---~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~ 156 (277)
T cd06640 84 LGGGSALDLLR----AGPFDEFQIATMLKEILKGLDYLHSE---KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI 156 (277)
T ss_pred CCCCcHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CccCcCCChhhEEEcCCCCEEEcccccceeccCCcc
Confidence 99999999985 24588999999999999999999998 999999999999999999999999999976644322
Q ss_pred ceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccccCccCH
Q 002278 774 HASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDL 853 (943)
Q Consensus 774 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 853 (943)
......++..|+|||++.+..++.++|+|||||++|||+||+.||.............. ...+.+ ..
T Consensus 157 -~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~-------~~~~~~-----~~ 223 (277)
T cd06640 157 -KRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPK-------NNPPTL-----TG 223 (277)
T ss_pred -ccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhhhhc-------CCCCCC-----ch
Confidence 22234578899999999988899999999999999999999999976544322211111 111111 11
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhh
Q 002278 854 SAVRKTFQLALLCTKRYPSERPTMQEVARVLVS 886 (943)
Q Consensus 854 ~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~ 886 (943)
.....+.+++..||+.+|++||++.+++++-+-
T Consensus 224 ~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 256 (277)
T cd06640 224 EFSKPFKEFIDACLNKDPSFRPTAKELLKHKFI 256 (277)
T ss_pred hhhHHHHHHHHHHcccCcccCcCHHHHHhChHh
Confidence 234567899999999999999999999988653
No 269
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=2.5e-34 Score=306.83 Aligned_cols=250 Identities=22% Similarity=0.308 Sum_probs=201.0
Q ss_pred ccccceEEeeeceEEEEEEEec-CCceEEEEEecccC--cccHHHHHHHHHHHhcCCCCCcceeeeEEecC-CcceEEEE
Q 002278 617 NLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQY--PHNLREFETELETIGSIRHRNIVSLHGYALSP-YGNLLFYD 692 (943)
Q Consensus 617 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-~~~~lv~e 692 (943)
+|+..+.||+|++|.||++..+ +++.||+|++.... ....+.+.+|++++++++|||++++++.+... ...+++||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e 80 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG 80 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence 4788899999999999999976 46889999986432 23445688999999999999999999987644 45789999
Q ss_pred EccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCC
Q 002278 693 YMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAM 772 (943)
Q Consensus 693 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~ 772 (943)
|+++++|.+++... ....+++.++..++.+++.|++|||+. +++||||||+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~~l~~~l~~~-~~~~l~~~~~~~~~~~l~~~l~~lH~~---~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~ 156 (257)
T cd08223 81 FCEGGDLYHKLKEQ-KGKLLPENQVVEWFVQIAMALQYLHEK---HILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQC 156 (257)
T ss_pred ccCCCcHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCchhEEEecCCcEEEecccceEEecccC
Confidence 99999999998642 234589999999999999999999999 99999999999999999999999999998764332
Q ss_pred CceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccccCccC
Q 002278 773 PHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVD 852 (943)
Q Consensus 773 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 852 (943)
. ......|++.|+|||+..+..++.++||||+|+++|||++|+.||...+.......... +.. +...
T Consensus 157 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~--~~~-----~~~~----- 223 (257)
T cd08223 157 D-MASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIE--GKL-----PPMP----- 223 (257)
T ss_pred C-ccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh--cCC-----CCCc-----
Confidence 2 22234588999999999999999999999999999999999999986543322211111 111 1111
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002278 853 LSAVRKTFQLALLCTKRYPSERPTMQEVARV 883 (943)
Q Consensus 853 ~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~ 883 (943)
......+.+++.+|++.+|++||++.+++++
T Consensus 224 ~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 254 (257)
T cd08223 224 KDYSPELGELIATMLSKRPEKRPSVKSILRQ 254 (257)
T ss_pred cccCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 1122467799999999999999999999876
No 270
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=3.1e-34 Score=308.85 Aligned_cols=253 Identities=23% Similarity=0.381 Sum_probs=201.4
Q ss_pred ccccceEEeeeceEEEEEEEec-CCceEEEEEecccCc----------ccHHHHHHHHHHHhcCCCCCcceeeeEEecCC
Q 002278 617 NLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQYP----------HNLREFETELETIGSIRHRNIVSLHGYALSPY 685 (943)
Q Consensus 617 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~----------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 685 (943)
+|...+.||+|+||.||+|... +++.||+|.+..... ...+.+.+|+.+++.++||||+++++++...+
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 4677889999999999999865 578899998753211 11245778999999999999999999999999
Q ss_pred cceEEEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccc
Q 002278 686 GNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIA 765 (943)
Q Consensus 686 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla 765 (943)
..++||||+++|+|.+++.. ...+++..+..++.|++.|+.|||+. +++||||+|+||++++++.++++|||++
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~---~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~~~nil~~~~~~~~l~d~~~~ 155 (272)
T cd06629 82 YLSIFLEYVPGGSIGSCLRT---YGRFEEQLVRFFTEQVLEGLAYLHSK---GILHRDLKADNLLVDADGICKISDFGIS 155 (272)
T ss_pred ceEEEEecCCCCcHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHhhC---CeeecCCChhhEEEcCCCeEEEeecccc
Confidence 99999999999999999863 35689999999999999999999998 9999999999999999999999999999
Q ss_pred cccCCCCCc-eeeeEecccceeCccccccCC--CCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccc--ccccc
Q 002278 766 RCIPTAMPH-ASTFVLGTIGYIDPEYAHTSR--LNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADD--NTVME 840 (943)
Q Consensus 766 ~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~--~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~--~~~~~ 840 (943)
+........ ......|+..|+|||...... ++.++|+||+|+++||+++|..||................ .....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 235 (272)
T cd06629 156 KKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRSAPPIPP 235 (272)
T ss_pred ccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhccccCCcCCc
Confidence 765432111 122345889999999987654 8899999999999999999999997655544333222111 11111
Q ss_pred ccCcccccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 002278 841 AVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVL 884 (943)
Q Consensus 841 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L 884 (943)
...+. ....+.+++..|++++|++||++.++++|-
T Consensus 236 ~~~~~---------~~~~~~~li~~~l~~~p~~Rps~~~il~~~ 270 (272)
T cd06629 236 DVSMN---------LSPVALDFLNACFTINPDNRPTARELLQHP 270 (272)
T ss_pred ccccc---------CCHHHHHHHHHHhcCChhhCCCHHHHhhCC
Confidence 11111 225677899999999999999999999873
No 271
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=1.2e-34 Score=314.57 Aligned_cols=261 Identities=25% Similarity=0.317 Sum_probs=203.2
Q ss_pred hccccceEEeeeceEEEEEEEec-CCceEEEEEecccCc--ccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEE
Q 002278 616 ENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQYP--HNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYD 692 (943)
Q Consensus 616 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 692 (943)
++|+..+.||+|+||.||+|.++ .++.||+|++..... ...+.+.+|+++++.++||||+++++++..++..++|||
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFE 80 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEe
Confidence 36888899999999999999986 478899998764332 234568889999999999999999999999999999999
Q ss_pred EccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCC
Q 002278 693 YMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAM 772 (943)
Q Consensus 693 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~ 772 (943)
|++++++.++.. ....+++.++..++.|++.|++|||+. +++||||+|+||++++++.++|+|||++.......
T Consensus 81 ~~~~~~l~~~~~---~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~ 154 (286)
T cd07846 81 FVDHTVLDDLEK---YPNGLDESRVRKYLFQILRGIEFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG 154 (286)
T ss_pred cCCccHHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCcEEEEeeeeeeeccCCc
Confidence 999999988765 234589999999999999999999999 99999999999999999999999999998764432
Q ss_pred CceeeeEecccceeCcccccc-CCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccc----------
Q 002278 773 PHASTFVLGTIGYIDPEYAHT-SRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEA---------- 841 (943)
Q Consensus 773 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~---------- 841 (943)
. ......++..|+|||+..+ ..++.++|||||||++|||++|++||........+...........+.
T Consensus 155 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (286)
T cd07846 155 E-VYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPL 233 (286)
T ss_pred c-ccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchH
Confidence 2 2223457899999998875 457889999999999999999999998666544333322111111000
Q ss_pred ----cCcccccCc----cCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002278 842 ----VDPEVSVTC----VDLSAVRKTFQLALLCTKRYPSERPTMQEVARV 883 (943)
Q Consensus 842 ----~~~~~~~~~----~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~ 883 (943)
..+...... ........+.+++.+||+.+|++||++.+++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 283 (286)
T cd07846 234 FAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHH 283 (286)
T ss_pred hhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcC
Confidence 000000000 000123567889999999999999999999876
No 272
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=3.8e-34 Score=315.53 Aligned_cols=194 Identities=25% Similarity=0.395 Sum_probs=158.9
Q ss_pred eEEeeeceEEEEEEEecC---CceEEEEEecccCcccHHHHHHHHHHHhcCCCCCcceeeeEEec--CCcceEEEEEccC
Q 002278 622 YIVGYGASSTVYKCALKN---SRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYALS--PYGNLLFYDYMVN 696 (943)
Q Consensus 622 ~~lG~G~~g~Vy~~~~~~---~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~lv~e~~~~ 696 (943)
..||+|+||+||+|..++ +..||+|.+.... ....+.+|+++++.++||||+++++++.. +...++||||+.
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~- 83 (317)
T cd07867 7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG--ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAE- 83 (317)
T ss_pred eEeccCCCeeEEEEEecCCCccceEEEEEecCCC--CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeC-
Confidence 579999999999999753 4789999886542 23567889999999999999999999854 456789999986
Q ss_pred CChhhhccCC------CCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEE----CCCCceeeccccccc
Q 002278 697 GSLWDLLHGP------SKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILI----DENFDAHLSDFGIAR 766 (943)
Q Consensus 697 g~L~~~l~~~------~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill----~~~~~~kl~DFGla~ 766 (943)
++|.+++... .....+++..+..++.|++.||+|||+. +|+||||||+||++ ++++.+||+|||+++
T Consensus 84 ~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~ 160 (317)
T cd07867 84 HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMGFAR 160 (317)
T ss_pred CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEccCCCCCCcEEEeecccee
Confidence 5777766421 1223588999999999999999999999 99999999999999 566789999999998
Q ss_pred ccCCCCCc--eeeeEecccceeCcccccc-CCCCCcchhhhHHHHHHHHHhCCCCCCC
Q 002278 767 CIPTAMPH--ASTFVLGTIGYIDPEYAHT-SRLNEKSDVYSFGIVLLEILTGKKAVDN 821 (943)
Q Consensus 767 ~~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltG~~p~~~ 821 (943)
........ ......||+.|+|||++.+ ..++.++||||+||++|||+||++||..
T Consensus 161 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~ 218 (317)
T cd07867 161 LFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 218 (317)
T ss_pred ccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCccc
Confidence 76443221 1233468999999999876 4589999999999999999999999974
No 273
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=3.4e-34 Score=307.33 Aligned_cols=249 Identities=25% Similarity=0.377 Sum_probs=196.3
Q ss_pred ccccceEEeeeceEEEEEEEec-CCceEEEEEecccC-----cccHHHHHHHHHHHhcCCCCCcceeeeEEecC--Ccce
Q 002278 617 NLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQY-----PHNLREFETELETIGSIRHRNIVSLHGYALSP--YGNL 688 (943)
Q Consensus 617 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~ 688 (943)
+|+..+.||+|+||.||+|... .++.||+|++.... ......+.+|+++++.++||||+++++++.+. ...+
T Consensus 3 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 82 (266)
T cd06651 3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLT 82 (266)
T ss_pred CccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEE
Confidence 6888899999999999999975 57899999875432 12335678899999999999999999998753 4578
Q ss_pred EEEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeeccccccccc
Q 002278 689 LFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCI 768 (943)
Q Consensus 689 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~ 768 (943)
+++||+++++|.+++. ....+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 83 l~~e~~~~~~L~~~l~---~~~~l~~~~~~~~~~qi~~~l~~LH~~---~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~ 156 (266)
T cd06651 83 IFMEYMPGGSVKDQLK---AYGALTESVTRKYTRQILEGMSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKRL 156 (266)
T ss_pred EEEeCCCCCcHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEccCCCcccc
Confidence 9999999999999986 334588999999999999999999998 9999999999999999999999999999765
Q ss_pred CCCCC--ceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCccc
Q 002278 769 PTAMP--HASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEV 846 (943)
Q Consensus 769 ~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 846 (943)
..... .......++..|+|||++.+..++.++||||+||++|||++|+.||................ ..+.+
T Consensus 157 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~~~~~~------~~~~~ 230 (266)
T cd06651 157 QTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIATQP------TNPQL 230 (266)
T ss_pred ccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHHHHHHHhcCC------CCCCC
Confidence 32111 11122347889999999999889999999999999999999999998665444333221111 11222
Q ss_pred ccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002278 847 SVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARV 883 (943)
Q Consensus 847 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~ 883 (943)
+. .....+..++ .||..+|++||+++|+++|
T Consensus 231 ~~-----~~~~~~~~li-~~~~~~p~~Rp~~~eil~h 261 (266)
T cd06651 231 PS-----HISEHARDFL-GCIFVEARHRPSAEELLRH 261 (266)
T ss_pred ch-----hcCHHHHHHH-HHhcCChhhCcCHHHHhcC
Confidence 11 1113444556 6888999999999999886
No 274
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.6e-35 Score=314.69 Aligned_cols=256 Identities=22% Similarity=0.330 Sum_probs=202.0
Q ss_pred HHhhccccceEEeeeceEEEEEEEecCCceEEEEEecc--cCcccHHHHHHHHHHHhcCC-CCCcceeeeEEecCCcceE
Q 002278 613 RSTENLSEKYIVGYGASSTVYKCALKNSRPIAVKKLYN--QYPHNLREFETELETIGSIR-HRNIVSLHGYALSPYGNLL 689 (943)
Q Consensus 613 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~l 689 (943)
.....|++.+.||+||.+.||++...+.+.||+|++.. .+......|..|+..|.+++ |.+||++++|-..++..|+
T Consensus 358 Vkg~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYm 437 (677)
T KOG0596|consen 358 VKGREYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYM 437 (677)
T ss_pred ECcchhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEE
Confidence 35567999999999999999999988888899998743 33556678999999999996 9999999999999999999
Q ss_pred EEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccC
Q 002278 690 FYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIP 769 (943)
Q Consensus 690 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~ 769 (943)
||||- ..+|..+|+... .....| .+..+..|++.|+.++|.+ ||||.||||.|+++-. |.+||+|||+|..+.
T Consensus 438 vmE~G-d~DL~kiL~k~~-~~~~~~-~lk~ywkqML~aV~~IH~~---gIVHSDLKPANFLlVk-G~LKLIDFGIA~aI~ 510 (677)
T KOG0596|consen 438 VMECG-DIDLNKILKKKK-SIDPDW-FLKFYWKQMLLAVKTIHQH---GIVHSDLKPANFLLVK-GRLKLIDFGIANAIQ 510 (677)
T ss_pred Eeecc-cccHHHHHHhcc-CCCchH-HHHHHHHHHHHHHHHHHHh---ceeecCCCcccEEEEe-eeEEeeeechhcccC
Confidence 99974 669999997432 122334 7788999999999999999 9999999999999865 689999999999876
Q ss_pred CCCCc-eeeeEecccceeCccccccCC-----------CCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccc
Q 002278 770 TAMPH-ASTFVLGTIGYIDPEYAHTSR-----------LNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNT 837 (943)
Q Consensus 770 ~~~~~-~~~~~~gt~~y~aPE~~~~~~-----------~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~ 837 (943)
.+... .....+||+.||+||.+.... .++++||||+|||||+|+.|++||....+...-+.
T Consensus 511 ~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~~aKl~------- 583 (677)
T KOG0596|consen 511 PDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQIAKLH------- 583 (677)
T ss_pred ccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHHHHHHHH-------
Confidence 54332 334567999999999875432 55799999999999999999999986543222111
Q ss_pred cccccCcccccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 002278 838 VMEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVL 884 (943)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L 884 (943)
...+|....++++.....+++++++.|++.||.+||+..++++|-
T Consensus 584 --aI~~P~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLqhp 628 (677)
T KOG0596|consen 584 --AITDPNHEIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQHP 628 (677)
T ss_pred --hhcCCCccccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhcCc
Confidence 222332222222222223488999999999999999999999873
No 275
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=2.3e-34 Score=313.12 Aligned_cols=265 Identities=25% Similarity=0.320 Sum_probs=208.2
Q ss_pred cccCHHHHHHHhhccccceEEeeeceEEEEEEEec-CCceEEEEEecccCcccHHHHHHHHHHHhcC-CCCCcceeeeEE
Q 002278 604 AIHTFDDIMRSTENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQYPHNLREFETELETIGSI-RHRNIVSLHGYA 681 (943)
Q Consensus 604 ~~~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~ 681 (943)
+.++.+++..++++|+..+.||+|+||.||+|..+ +++.+|+|.+... ......+.+|+.+++++ +|||++++++++
T Consensus 10 ~~~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~-~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~ 88 (291)
T cd06639 10 SMLGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPI-SDVDEEIEAEYNILQSLPNHPNVVKFYGMF 88 (291)
T ss_pred hhhhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEeccc-ccHHHHHHHHHHHHHHhcCCCCeEEEEEEE
Confidence 34555666677899999999999999999999975 5788999988543 23346778899999998 799999999998
Q ss_pred ecCC-----cceEEEEEccCCChhhhccCCC-CCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCC
Q 002278 682 LSPY-----GNLLFYDYMVNGSLWDLLHGPS-KKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENF 755 (943)
Q Consensus 682 ~~~~-----~~~lv~e~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~ 755 (943)
...+ ..++||||+++|+|.++++... ....+++..+..++.|++.||+|||+. +++||||||+||++++++
T Consensus 89 ~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~nili~~~~ 165 (291)
T cd06639 89 YKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNN---RIIHRDVKGNNILLTTEG 165 (291)
T ss_pred EeccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCC
Confidence 7543 4799999999999999885321 234689999999999999999999998 999999999999999999
Q ss_pred ceeecccccccccCCCCCceeeeEecccceeCccccccC-----CCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHH
Q 002278 756 DAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTS-----RLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIM 830 (943)
Q Consensus 756 ~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~ 830 (943)
.+||+|||+++........ .....|+..|+|||++... .++.++|||||||++|||++|+.||...........
T Consensus 166 ~~kl~dfg~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~ 244 (291)
T cd06639 166 GVKLVDFGVSAQLTSTRLR-RNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFK 244 (291)
T ss_pred CEEEeecccchhccccccc-ccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHH
Confidence 9999999999865433222 1223588999999987643 368899999999999999999999987655444333
Q ss_pred HhccccccccccCcccccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002278 831 SKADDNTVMEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARV 883 (943)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~ 883 (943)
...... +.+... ......+.+++.+|++.+|++||++.++++|
T Consensus 245 ~~~~~~-------~~~~~~---~~~~~~l~~li~~~l~~~p~~Rps~~~il~~ 287 (291)
T cd06639 245 IPRNPP-------PTLLHP---EKWCRSFNHFISQCLIKDFEARPSVTHLLEH 287 (291)
T ss_pred HhcCCC-------CCCCcc---cccCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 222111 111000 0112457789999999999999999999887
No 276
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=2.1e-34 Score=318.59 Aligned_cols=262 Identities=20% Similarity=0.257 Sum_probs=195.6
Q ss_pred cceEEeee--ceEEEEEEEec-CCceEEEEEecccC--cccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEEc
Q 002278 620 EKYIVGYG--ASSTVYKCALK-NSRPIAVKKLYNQY--PHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYM 694 (943)
Q Consensus 620 ~~~~lG~G--~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 694 (943)
...+||+| +||+||++..+ +++.||+|++.... ....+.+.+|+++++.++||||+++++++..++..++||||+
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 81 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM 81 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence 34679999 78999999876 57889999986542 223456778999999999999999999999999999999999
Q ss_pred cCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCCc
Q 002278 695 VNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPH 774 (943)
Q Consensus 695 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~~ 774 (943)
++|+|.+++.... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.++++|||.+.........
T Consensus 82 ~~~~l~~~~~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~ 157 (327)
T cd08227 82 AYGSAKDLICTHF-MDGMSELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQR 157 (327)
T ss_pred CCCcHHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCChhhEEEecCCcEEEcccchhhcccccccc
Confidence 9999999986321 23589999999999999999999999 9999999999999999999999999875443211100
Q ss_pred ------eeeeEecccceeCcccccc--CCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhcccccc-c------
Q 002278 775 ------ASTFVLGTIGYIDPEYAHT--SRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTV-M------ 839 (943)
Q Consensus 775 ------~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~-~------ 839 (943)
......++..|+|||++.+ ..++.++|||||||++|||++|+.||.................+. .
T Consensus 158 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (327)
T cd08227 158 LRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTIP 237 (327)
T ss_pred ccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccccchh
Confidence 0112246778999999876 468999999999999999999999997544322222211110000 0
Q ss_pred -cc---------cC-------------ccccc---CccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 002278 840 -EA---------VD-------------PEVSV---TCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLV 885 (943)
Q Consensus 840 -~~---------~~-------------~~~~~---~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~ 885 (943)
+. .+ +.... ..........+.+++..|++.||++|||+++++++-+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p~ 309 (327)
T cd08227 238 AEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSF 309 (327)
T ss_pred hhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcChh
Confidence 00 00 00000 0001112346789999999999999999999998754
No 277
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=3.1e-34 Score=306.38 Aligned_cols=237 Identities=25% Similarity=0.364 Sum_probs=189.3
Q ss_pred eEEeeeceEEEEEEEecCCc-----------eEEEEEecccCcccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEE
Q 002278 622 YIVGYGASSTVYKCALKNSR-----------PIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLF 690 (943)
Q Consensus 622 ~~lG~G~~g~Vy~~~~~~~~-----------~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 690 (943)
+.||+|+||.||+|.++... .+++|.+...... ...+.+|+.+++.++||||+++++++.. ...++|
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv 78 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMV 78 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEE
Confidence 35899999999999987533 4677766543322 6788999999999999999999999988 788999
Q ss_pred EEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCC-------ceeecccc
Q 002278 691 YDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENF-------DAHLSDFG 763 (943)
Q Consensus 691 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~-------~~kl~DFG 763 (943)
|||+++|+|.+++... ...+++..+..++.|++.||+|||++ +|+||||||+||+++.++ .+|++|||
T Consensus 79 ~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg 153 (259)
T cd05037 79 EEYVKFGPLDVFLHRE--KNNVSLHWKLDVAKQLASALHYLEDK---KLVHGNVCGKNILVARYGLNEGYVPFIKLSDPG 153 (259)
T ss_pred EEcCCCCcHHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHhhC---CeecccCccceEEEecCccccCCceeEEeCCCC
Confidence 9999999999998632 22689999999999999999999998 999999999999999887 79999999
Q ss_pred cccccCCCCCceeeeEecccceeCccccccC--CCCCcchhhhHHHHHHHHHh-CCCCCCCCccHHHHHHHhcccccccc
Q 002278 764 IARCIPTAMPHASTFVLGTIGYIDPEYAHTS--RLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKADDNTVME 840 (943)
Q Consensus 764 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~ 840 (943)
++..... .....++..|+|||++.+. .++.++|||||||++|||++ |..||........ .........
T Consensus 154 ~a~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~-~~~~~~~~~--- 224 (259)
T cd05037 154 IPITVLS-----REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEK-ERFYQDQHR--- 224 (259)
T ss_pred ccccccc-----ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhH-HHHHhcCCC---
Confidence 9986543 1223467889999998876 78999999999999999999 5777865532221 111111000
Q ss_pred ccCcccccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 002278 841 AVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVL 884 (943)
Q Consensus 841 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L 884 (943)
.... . ...+.+++.+||..+|++|||+.++++.|
T Consensus 225 -----~~~~--~---~~~~~~li~~~l~~~p~~Rpt~~~il~~l 258 (259)
T cd05037 225 -----LPMP--D---CAELANLINQCWTYDPTKRPSFRAILRDL 258 (259)
T ss_pred -----CCCC--C---chHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 0000 0 15678999999999999999999999876
No 278
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=4.1e-34 Score=315.02 Aligned_cols=254 Identities=24% Similarity=0.269 Sum_probs=206.4
Q ss_pred hccccceEEeeeceEEEEEEEecC-CceEEEEEecccCcc---cHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEE
Q 002278 616 ENLSEKYIVGYGASSTVYKCALKN-SRPIAVKKLYNQYPH---NLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFY 691 (943)
Q Consensus 616 ~~~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 691 (943)
++|+..+.||+|+||+||+|...+ ++.||+|.+...... ..+.+..|+++++.++||||+++++++.+....++||
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 80 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM 80 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence 368888999999999999999764 889999998654322 4456889999999999999999999999999999999
Q ss_pred EEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCC
Q 002278 692 DYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTA 771 (943)
Q Consensus 692 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~ 771 (943)
||+.+++|.+++... ....+++..+..++.|++.||+|||+. +++||||||+||+++.++.++|+|||++......
T Consensus 81 e~~~~~~L~~~~~~~-~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~ 156 (316)
T cd05574 81 DYCPGGELFRLLQRQ-PGKCLSEEVARFYAAEVLLALEYLHLL---GIVYRDLKPENILLHESGHIMLSDFDLSKQSDVE 156 (316)
T ss_pred EecCCCCHHHHHHhC-CCCccCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChHHeEEcCCCCEEEeecchhhccccc
Confidence 999999999998632 235689999999999999999999999 9999999999999999999999999998765322
Q ss_pred CCc----------------------------eeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCc
Q 002278 772 MPH----------------------------ASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNES 823 (943)
Q Consensus 772 ~~~----------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~ 823 (943)
... ......|+..|+|||+..+..++.++||||||+++|+|++|+.||.+..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~ 236 (316)
T cd05574 157 PPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSN 236 (316)
T ss_pred ccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCc
Confidence 111 0112357889999999999899999999999999999999999998766
Q ss_pred cHHHHHHHhccccccccccCcccccCccCHHHHHHHHHHHHHccCCCCCCCCC----HHHHHHHH
Q 002278 824 NLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPT----MQEVARVL 884 (943)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt----~~el~~~L 884 (943)
....+............. ......+.+++.+|+..||++||+ +.+++.+-
T Consensus 237 ~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~~ 290 (316)
T cd05574 237 RDETFSNILKKEVTFPGS-----------PPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHP 290 (316)
T ss_pred hHHHHHHHhcCCccCCCc-----------cccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcCc
Confidence 544443332221111110 012357789999999999999999 88888763
No 279
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=6.5e-34 Score=308.22 Aligned_cols=251 Identities=22% Similarity=0.336 Sum_probs=204.4
Q ss_pred ccccceEEeeeceEEEEEEEec-CCceEEEEEecccCcccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEEcc
Q 002278 617 NLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMV 695 (943)
Q Consensus 617 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 695 (943)
.|...+.||+|++|.||+|... +++.+|+|++........+.+.+|+.+++.++||||+++++++...+..++++||++
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~ 99 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLE 99 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccC
Confidence 3445578999999999999965 678899998865544455678899999999999999999999999999999999999
Q ss_pred CCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCCce
Q 002278 696 NGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHA 775 (943)
Q Consensus 696 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~~~ 775 (943)
+++|.+++.. .++++..+..++.|++.|++|||+. +++||||+|+||+++.++.++++|||.+........ .
T Consensus 100 ~~~L~~~~~~----~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~-~ 171 (285)
T cd06648 100 GGALTDIVTH----TRMNEEQIATVCLAVLKALSFLHAQ---GVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVP-R 171 (285)
T ss_pred CCCHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChhhEEEcCCCcEEEcccccchhhccCCc-c
Confidence 9999999863 4689999999999999999999999 999999999999999999999999999876543322 2
Q ss_pred eeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccccCccCHHH
Q 002278 776 STFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSA 855 (943)
Q Consensus 776 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 855 (943)
.....|++.|+|||...+..++.++|||||||++|||++|+.||................. +..... ...
T Consensus 172 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~-------~~~~~~---~~~ 241 (285)
T cd06648 172 RKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDNLP-------PKLKNL---HKV 241 (285)
T ss_pred cccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHhcCC-------CCCccc---ccC
Confidence 2234589999999999888899999999999999999999999987655443332222111 111100 012
Q ss_pred HHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 002278 856 VRKTFQLALLCTKRYPSERPTMQEVARVLV 885 (943)
Q Consensus 856 ~~~l~~l~~~cl~~dP~~RPt~~el~~~L~ 885 (943)
...+.+++.+||+.+|++||++.+++++-+
T Consensus 242 ~~~l~~li~~~l~~~p~~Rpt~~~il~~~~ 271 (285)
T cd06648 242 SPRLRSFLDRMLVRDPAQRATAAELLNHPF 271 (285)
T ss_pred CHHHHHHHHHHcccChhhCcCHHHHccCcc
Confidence 246789999999999999999999998643
No 280
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=4.1e-34 Score=304.97 Aligned_cols=250 Identities=24% Similarity=0.355 Sum_probs=204.3
Q ss_pred ccccceEEeeeceEEEEEEEec-CCceEEEEEeccc--CcccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEE
Q 002278 617 NLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQ--YPHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDY 693 (943)
Q Consensus 617 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 693 (943)
+|+..+.||+|+||.||.+... +++.||+|++... ......++.+|+++++.++||||+++++++...+..++||||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY 80 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence 4788899999999999999865 5788999988643 233446788999999999999999999999999999999999
Q ss_pred ccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCC
Q 002278 694 MVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMP 773 (943)
Q Consensus 694 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~ 773 (943)
+++++|.+++... ....+++.++..++.|++.|++|||+. +++|+||+|+||+++.++.++++|||++........
T Consensus 81 ~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~ 156 (256)
T cd08218 81 CEGGDLYKKINAQ-RGVLFPEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVE 156 (256)
T ss_pred CCCCcHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEEeeccceeecCcchh
Confidence 9999999988632 223578999999999999999999998 999999999999999999999999999986644322
Q ss_pred ceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccccCccCH
Q 002278 774 HASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDL 853 (943)
Q Consensus 774 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 853 (943)
. .....|++.|+|||+..+..++.++|+|||||++|+|++|+.||................. +....
T Consensus 157 ~-~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~-------~~~~~----- 223 (256)
T cd08218 157 L-ARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIRGSY-------PPVSS----- 223 (256)
T ss_pred h-hhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHHhcCCC-------CCCcc-----
Confidence 1 1224588899999999988899999999999999999999999986554333322222111 11111
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002278 854 SAVRKTFQLALLCTKRYPSERPTMQEVARV 883 (943)
Q Consensus 854 ~~~~~l~~l~~~cl~~dP~~RPt~~el~~~ 883 (943)
.....+.+++.+||+.+|++||++.+++++
T Consensus 224 ~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~ 253 (256)
T cd08218 224 HYSYDLRNLVSQLFKRNPRDRPSVNSILEK 253 (256)
T ss_pred cCCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence 112467889999999999999999999986
No 281
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=6.5e-34 Score=307.51 Aligned_cols=258 Identities=24% Similarity=0.354 Sum_probs=204.6
Q ss_pred hhccccceEEeeeceEEEEEEEecC-C----ceEEEEEecccCc-ccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcce
Q 002278 615 TENLSEKYIVGYGASSTVYKCALKN-S----RPIAVKKLYNQYP-HNLREFETELETIGSIRHRNIVSLHGYALSPYGNL 688 (943)
Q Consensus 615 ~~~~~~~~~lG~G~~g~Vy~~~~~~-~----~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 688 (943)
..+|+..+.||+|+||.||+|.++. + ..||+|....... .....+.+|+++++.++||||+++++++.. ...+
T Consensus 6 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~ 84 (279)
T cd05057 6 ETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQ 84 (279)
T ss_pred HHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceE
Confidence 3578888999999999999998653 3 2588888765432 344678899999999999999999999987 7889
Q ss_pred EEEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeeccccccccc
Q 002278 689 LFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCI 768 (943)
Q Consensus 689 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~ 768 (943)
+||||+++|+|.+++... ...+++..+..++.|++.|++|||+. +++||||||+||++++++.+||+|||.++..
T Consensus 85 ~v~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kL~dfg~~~~~ 159 (279)
T cd05057 85 LITQLMPLGCLLDYVRNH--KDNIGSQYLLNWCVQIAKGMSYLEEK---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL 159 (279)
T ss_pred EEEecCCCCcHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHhC---CEEecccCcceEEEcCCCeEEECCCcccccc
Confidence 999999999999998642 34589999999999999999999998 9999999999999999999999999999876
Q ss_pred CCCCCcee-eeEecccceeCccccccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCccHHHHHHHhccccccccccCccc
Q 002278 769 PTAMPHAS-TFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKADDNTVMEAVDPEV 846 (943)
Q Consensus 769 ~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 846 (943)
........ ....++..|+|||......++.++|+|||||++||+++ |+.||.+.... .+............ ++.
T Consensus 160 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~-~~~~~~~~~~~~~~--~~~- 235 (279)
T cd05057 160 DVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAV-EIPDLLEKGERLPQ--PPI- 235 (279)
T ss_pred cCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHH-HHHHHHhCCCCCCC--CCC-
Confidence 53322111 11223568999999988889999999999999999999 99999865432 22222221111100 000
Q ss_pred ccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcCCC
Q 002278 847 SVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLVSLLPA 890 (943)
Q Consensus 847 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~~~~~ 890 (943)
....+.+++.+||..+|++||++.++++.+..+...
T Consensus 236 --------~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~~ 271 (279)
T cd05057 236 --------CTIDVYMVLVKCWMIDAESRPTFKELINEFSKMARD 271 (279)
T ss_pred --------CCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhC
Confidence 113567899999999999999999999999887543
No 282
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=4.6e-34 Score=306.98 Aligned_cols=251 Identities=19% Similarity=0.308 Sum_probs=189.4
Q ss_pred EEeeeceEEEEEEEecC---CceEEEEEecccCc-ccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEEccCCC
Q 002278 623 IVGYGASSTVYKCALKN---SRPIAVKKLYNQYP-HNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGS 698 (943)
Q Consensus 623 ~lG~G~~g~Vy~~~~~~---~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 698 (943)
.||+|+||+||+|.... ...+|+|.+..... .....+.+|++.++.++||||+++++++......++||||+++|+
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g~ 81 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGD 81 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCCc
Confidence 48999999999997543 34678887754332 234567889999999999999999999999999999999999999
Q ss_pred hhhhccCCCC--CccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCCc-e
Q 002278 699 LWDLLHGPSK--KVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPH-A 775 (943)
Q Consensus 699 L~~~l~~~~~--~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~~-~ 775 (943)
|.+++..... ....++..+..++.|++.|++|||+. +|+||||||+||++++++.+||+|||++......... .
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~ 158 (269)
T cd05042 82 LKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQA---DFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYIT 158 (269)
T ss_pred HHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhc---CEecccccHhheEecCCCcEEEeccccccccccchheec
Confidence 9999864322 23356788899999999999999999 9999999999999999999999999998754322111 1
Q ss_pred eeeEecccceeCcccccc-------CCCCCcchhhhHHHHHHHHHh-CCCCCCCCccHHHHHHHhccccccccccCcccc
Q 002278 776 STFVLGTIGYIDPEYAHT-------SRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKADDNTVMEAVDPEVS 847 (943)
Q Consensus 776 ~~~~~gt~~y~aPE~~~~-------~~~~~~~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 847 (943)
.....++..|+|||+... ..++.++|||||||++|||++ |..||....+............. ....+.+.
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 236 (269)
T cd05042 159 KDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDI--KLPKPQLD 236 (269)
T ss_pred cCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccCc--cCCCCccc
Confidence 122335678999998643 356789999999999999999 78888766554433332222111 11111111
Q ss_pred cCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 002278 848 VTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVL 884 (943)
Q Consensus 848 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L 884 (943)
. .....+.+++..|| .||++|||+++|++.+
T Consensus 237 ~-----~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l 267 (269)
T cd05042 237 L-----KYSDRWYEVMQFCW-LDPETRPTAEEVHELL 267 (269)
T ss_pred c-----cCCHHHHHHHHHHh-cCcccccCHHHHHHHh
Confidence 1 11245567888898 5999999999999876
No 283
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=2e-34 Score=313.11 Aligned_cols=262 Identities=24% Similarity=0.299 Sum_probs=205.0
Q ss_pred hccccceEEeeeceEEEEEEEec-CCceEEEEEecccC--cccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEE
Q 002278 616 ENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQY--PHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYD 692 (943)
Q Consensus 616 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 692 (943)
++|+..+.||+|+||.||+|.++ +++.||+|++.... ......+.+|+++++.++|+||+++++++..++..+++||
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 80 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFE 80 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEe
Confidence 36888999999999999999976 47889999886432 3345678999999999999999999999999999999999
Q ss_pred EccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCC
Q 002278 693 YMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAM 772 (943)
Q Consensus 693 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~ 772 (943)
|++++.+..+.. ....+++.++..++.|++.|++|||+. +++||||+|+||++++++.+||+|||++.......
T Consensus 81 ~~~~~~l~~~~~---~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~ 154 (288)
T cd07833 81 YVERTLLELLEA---SPGGLPPDAVRSYIWQLLQAIAYCHSH---NIIHRDIKPENILVSESGVLKLCDFGFARALRARP 154 (288)
T ss_pred cCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEEeeecccccCCCc
Confidence 999877766654 334589999999999999999999999 99999999999999999999999999998765543
Q ss_pred CceeeeEecccceeCccccccC-CCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccc------cCcc
Q 002278 773 PHASTFVLGTIGYIDPEYAHTS-RLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEA------VDPE 845 (943)
Q Consensus 773 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~------~~~~ 845 (943)
........++..|+|||++.+. .++.++||||||+++|+|++|+.||.+..............+..... ..+.
T Consensus 155 ~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (288)
T cd07833 155 ASPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPR 234 (288)
T ss_pred cccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCcc
Confidence 3233335578999999999887 88999999999999999999999998665544333222111110000 0000
Q ss_pred ccc-----C--------ccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002278 846 VSV-----T--------CVDLSAVRKTFQLALLCTKRYPSERPTMQEVARV 883 (943)
Q Consensus 846 ~~~-----~--------~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~ 883 (943)
... . .........+.+++++||..+|++||++++++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 285 (288)
T cd07833 235 FAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQH 285 (288)
T ss_pred ccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcC
Confidence 000 0 0000113567899999999999999999999875
No 284
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=5.6e-34 Score=305.54 Aligned_cols=251 Identities=25% Similarity=0.336 Sum_probs=198.1
Q ss_pred hccccceEEeeeceEEEEEEEec-CCceEEEEEecccC-----cccHHHHHHHHHHHhcCCCCCcceeeeEEecC--Ccc
Q 002278 616 ENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQY-----PHNLREFETELETIGSIRHRNIVSLHGYALSP--YGN 687 (943)
Q Consensus 616 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~ 687 (943)
++|+..+.||+|+||.||.|..+ +++.||+|.+.... ....+.+.+|++++++++||||+++++++.+. ...
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 46888999999999999999976 47899999875321 12245678899999999999999999998764 356
Q ss_pred eEEEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccc
Q 002278 688 LLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARC 767 (943)
Q Consensus 688 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~ 767 (943)
+++|||+++++|.+++. ....+++..+..++.|++.||+|||+. +++|+||||+||+++.++.++|+|||+++.
T Consensus 82 ~~v~e~~~~~~L~~~l~---~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~ 155 (265)
T cd06652 82 SIFMEHMPGGSIKDQLK---SYGALTENVTRKYTRQILEGVSYLHSN---MIVHRDIKGANILRDSVGNVKLGDFGASKR 155 (265)
T ss_pred EEEEEecCCCcHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEecCCCCEEECcCccccc
Confidence 78999999999999986 334578899999999999999999999 999999999999999999999999999986
Q ss_pred cCCCCC--ceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcc
Q 002278 768 IPTAMP--HASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPE 845 (943)
Q Consensus 768 ~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 845 (943)
...... .......|+..|+|||++.+..++.++|||||||++|||++|+.||............... . ..+.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~-~-----~~~~ 229 (265)
T cd06652 156 LQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQ-P-----TNPV 229 (265)
T ss_pred cccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHHHHHHHhcC-C-----CCCC
Confidence 532111 1122345889999999998888999999999999999999999999865444333222111 1 0111
Q ss_pred cccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 002278 846 VSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVL 884 (943)
Q Consensus 846 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L 884 (943)
.+ ......+.+++.+|+. +|++||++++++++-
T Consensus 230 ~~-----~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~~ 262 (265)
T cd06652 230 LP-----PHVSDHCRDFLKRIFV-EAKLRPSADELLRHT 262 (265)
T ss_pred Cc-----hhhCHHHHHHHHHHhc-ChhhCCCHHHHhcCc
Confidence 11 1122456678888984 899999999998763
No 285
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=7e-34 Score=303.44 Aligned_cols=251 Identities=29% Similarity=0.435 Sum_probs=201.1
Q ss_pred cccceEEeeeceEEEEEEEecC-----CceEEEEEecccCcc-cHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEE
Q 002278 618 LSEKYIVGYGASSTVYKCALKN-----SRPIAVKKLYNQYPH-NLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFY 691 (943)
Q Consensus 618 ~~~~~~lG~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 691 (943)
++..+.||+|+||.||+|.+.. +..||+|++...... ..+.+..|+++++.++|+||+++++++.+.+..+++|
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~ 80 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVM 80 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEE
Confidence 3566789999999999999764 378999998655433 5678899999999999999999999999999999999
Q ss_pred EEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCC
Q 002278 692 DYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTA 771 (943)
Q Consensus 692 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~ 771 (943)
||+++++|.+++..... ..+++.++..++.|++.|++|||+. +++||||||+||++++++.++++|||+++.....
T Consensus 81 e~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~ql~~~l~~lh~~---~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~ 156 (258)
T smart00219 81 EYMEGGDLLDYLRKNRP-KELSLSDLLSFALQIARGMEYLESK---NFIHRDLAARNCLVGENLVVKISDFGLSRDLYDD 156 (258)
T ss_pred eccCCCCHHHHHHhhhh-ccCCHHHHHHHHHHHHHHHHHHhcC---CeeecccccceEEEccCCeEEEcccCCceecccc
Confidence 99999999999863211 1289999999999999999999999 9999999999999999999999999999876544
Q ss_pred CCceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCccHHHHHHHhccccccccccCcccccCc
Q 002278 772 MPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTC 850 (943)
Q Consensus 772 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 850 (943)
.........+++.|+|||...+..++.++||||+|+++|+|++ |+.||........ ......... . ....
T Consensus 157 ~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~-~~~~~~~~~-~-~~~~------ 227 (258)
T smart00219 157 DYYKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEV-LEYLKKGYR-L-PKPE------ 227 (258)
T ss_pred cccccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHH-HHHHhcCCC-C-CCCC------
Confidence 2222212236789999999988889999999999999999998 8888876443222 222211111 0 0011
Q ss_pred cCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 002278 851 VDLSAVRKTFQLALLCTKRYPSERPTMQEVARVL 884 (943)
Q Consensus 851 ~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L 884 (943)
.....+.+++.+|+..+|++|||+.++++.|
T Consensus 228 ---~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 228 ---NCPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred ---cCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 1235678899999999999999999998754
No 286
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.6e-34 Score=321.14 Aligned_cols=192 Identities=24% Similarity=0.333 Sum_probs=163.6
Q ss_pred HhhccccceEEeeeceEEEEEEEecC-CceEEEEEecccCcccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEE
Q 002278 614 STENLSEKYIVGYGASSTVYKCALKN-SRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYD 692 (943)
Q Consensus 614 ~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 692 (943)
...+|+..+.||+|+||.||+|.... ++.||+|..... ....|+.++++++||||+++++++......++|||
T Consensus 64 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 137 (357)
T PHA03209 64 ASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLP 137 (357)
T ss_pred hhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEE
Confidence 44579999999999999999999764 577888875332 23568999999999999999999999999999999
Q ss_pred EccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCC
Q 002278 693 YMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAM 772 (943)
Q Consensus 693 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~ 772 (943)
++ .++|.+++.. ....+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++......
T Consensus 138 ~~-~~~l~~~l~~--~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 211 (357)
T PHA03209 138 HY-SSDLYTYLTK--RSRPLPIDQALIIEKQILEGLRYLHAQ---RIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVAP 211 (357)
T ss_pred cc-CCcHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEecCccccccccCc
Confidence 98 4688888753 345689999999999999999999999 99999999999999999999999999997543221
Q ss_pred CceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCC
Q 002278 773 PHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAV 819 (943)
Q Consensus 773 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~ 819 (943)
......||+.|+|||++.+..++.++|||||||++|||+++..|+
T Consensus 212 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~ 256 (357)
T PHA03209 212 --AFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTI 256 (357)
T ss_pred --ccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCcc
Confidence 122345899999999999999999999999999999999855444
No 287
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=3.6e-34 Score=311.50 Aligned_cols=253 Identities=24% Similarity=0.337 Sum_probs=206.6
Q ss_pred hhccccceEEeeeceEEEEEEEec-CCceEEEEEecccCcccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEE
Q 002278 615 TENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDY 693 (943)
Q Consensus 615 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 693 (943)
.++|...+.||+|+||.||+|... +++.||+|.+........+.+.+|+.+++.++||||+++++++...+..++|+||
T Consensus 18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~ 97 (293)
T cd06647 18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEY 97 (293)
T ss_pred hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEec
Confidence 468888999999999999999865 5788999998655455567788999999999999999999999999999999999
Q ss_pred ccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCC
Q 002278 694 MVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMP 773 (943)
Q Consensus 694 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~ 773 (943)
+++++|.+++. ...+++..+..++.|++.|++|||+. +++||||||+||+++.++.++|+|||++........
T Consensus 98 ~~~~~L~~~~~----~~~l~~~~~~~i~~~l~~al~~LH~~---gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~ 170 (293)
T cd06647 98 LAGGSLTDVVT----ETCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS 170 (293)
T ss_pred CCCCcHHHHHh----hcCCCHHHHHHHHHHHHHHHHHHHhC---CEeeccCCHHHEEEcCCCCEEEccCcceeccccccc
Confidence 99999999985 23578999999999999999999999 999999999999999999999999999876543322
Q ss_pred ceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccccCccCH
Q 002278 774 HASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDL 853 (943)
Q Consensus 774 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 853 (943)
......|++.|+|||...+..++.++|||||||++|++++|+.||................. +... ...
T Consensus 171 -~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~-------~~~~---~~~ 239 (293)
T cd06647 171 -KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGT-------PELQ---NPE 239 (293)
T ss_pred -ccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeehhcCCC-------CCCC---Ccc
Confidence 22234588999999999888899999999999999999999999986654332221111110 1111 011
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 002278 854 SAVRKTFQLALLCTKRYPSERPTMQEVARVLV 885 (943)
Q Consensus 854 ~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~ 885 (943)
.....+.+++..||..+|++||++.+++.|-+
T Consensus 240 ~~~~~l~~li~~~l~~~p~~Rp~~~~il~h~~ 271 (293)
T cd06647 240 KLSAIFRDFLNRCLEMDVEKRGSAKELLQHPF 271 (293)
T ss_pred ccCHHHHHHHHHHccCChhhCcCHHHHhcCHH
Confidence 12245778999999999999999999998854
No 288
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.5e-35 Score=303.90 Aligned_cols=256 Identities=23% Similarity=0.254 Sum_probs=202.7
Q ss_pred HhhccccceEEeeeceEEEEEEEec-CCceEEEEEecccC---cccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceE
Q 002278 614 STENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQY---PHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLL 689 (943)
Q Consensus 614 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 689 (943)
..+.|..-++||+|+||.||.+..+ .|+.||.|++.+.. .....-...|-++++++..+.||.+--.|+..+..++
T Consensus 183 t~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LCl 262 (591)
T KOG0986|consen 183 TKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCL 262 (591)
T ss_pred cccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEE
Confidence 3456777889999999999999866 57889999885443 2223345689999999999999999989999999999
Q ss_pred EEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccC
Q 002278 690 FYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIP 769 (943)
Q Consensus 690 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~ 769 (943)
|+..|.||+|.-+|..... ..+++..+.-+|.+|+.||++||.. +||+||+||+|||+|+.|+++|+|.|+|..+.
T Consensus 263 VLtlMNGGDLkfHiyn~g~-~gF~e~ra~FYAAEi~cGLehlH~~---~iVYRDLKPeNILLDd~GhvRISDLGLAvei~ 338 (591)
T KOG0986|consen 263 VLTLMNGGDLKFHIYNHGN-PGFDEQRARFYAAEIICGLEHLHRR---RIVYRDLKPENILLDDHGHVRISDLGLAVEIP 338 (591)
T ss_pred EEEeecCCceeEEeeccCC-CCCchHHHHHHHHHHHhhHHHHHhc---ceeeccCChhheeeccCCCeEeeccceEEecC
Confidence 9999999999999975433 4699999999999999999999999 99999999999999999999999999999887
Q ss_pred CCCCceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccccC
Q 002278 770 TAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVT 849 (943)
Q Consensus 770 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 849 (943)
...+.. ..+||.+|||||++....|+..+|.||+||++|||+.|+.||........+...........+.....+
T Consensus 339 ~g~~~~--~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~~~~ey~~kF--- 413 (591)
T KOG0986|consen 339 EGKPIR--GRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLEDPEEYSDKF--- 413 (591)
T ss_pred CCCccc--cccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhcchhhccccc---
Confidence 665443 336999999999999999999999999999999999999999743322221111111001111111111
Q ss_pred ccCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHHH
Q 002278 850 CVDLSAVRKTFQLALLCTKRYPSERP-----TMQEVARVL 884 (943)
Q Consensus 850 ~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~el~~~L 884 (943)
.++.-.+.+..+++||++|- .+++|.+|-
T Consensus 414 ------S~eakslc~~LL~Kdp~~RLGcrg~ga~evk~Hp 447 (591)
T KOG0986|consen 414 ------SEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKEHP 447 (591)
T ss_pred ------CHHHHHHHHHHHccCHHHhccCCCcCcchhhhCc
Confidence 13445678888999999986 567777653
No 289
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=2.9e-34 Score=311.19 Aligned_cols=261 Identities=23% Similarity=0.274 Sum_probs=201.4
Q ss_pred ccccceEEeeeceEEEEEEEec-CCceEEEEEecccC--cccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEE
Q 002278 617 NLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQY--PHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDY 693 (943)
Q Consensus 617 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 693 (943)
+|+..+.||.|++|.||+|+.+ +++.||+|++.... ......+.+|++++++++||||+++++++.+.+..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 80 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence 4778899999999999999976 57889999886432 22345788999999999999999999999999999999999
Q ss_pred ccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCC
Q 002278 694 MVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMP 773 (943)
Q Consensus 694 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~ 773 (943)
+. ++|.+++... ....+++..+..++.|++.|++|||+. +++||||+|+||++++++.+|++|||+++.......
T Consensus 81 ~~-~~l~~~~~~~-~~~~l~~~~~~~~~~~i~~~l~~lh~~---~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~ 155 (284)
T cd07860 81 LH-QDLKKFMDAS-PLSGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 155 (284)
T ss_pred cc-cCHHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEeeccchhhcccCcc
Confidence 95 6888887643 235689999999999999999999998 999999999999999999999999999976543322
Q ss_pred ceeeeEecccceeCccccccCC-CCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCccc------
Q 002278 774 HASTFVLGTIGYIDPEYAHTSR-LNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEV------ 846 (943)
Q Consensus 774 ~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 846 (943)
. .....++..|+|||+..+.. ++.++|||||||++|||+||+.||................+......++..
T Consensus 156 ~-~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (284)
T cd07860 156 T-YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDY 234 (284)
T ss_pred c-cccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHH
Confidence 1 12234688999999887644 688999999999999999999999876654444333322221111111100
Q ss_pred ----ccC-ccC-----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002278 847 ----SVT-CVD-----LSAVRKTFQLALLCTKRYPSERPTMQEVARV 883 (943)
Q Consensus 847 ----~~~-~~~-----~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~ 883 (943)
... ... ......+.+++.+|++.||++|||+.+++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 281 (284)
T cd07860 235 KPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAH 281 (284)
T ss_pred HhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcC
Confidence 000 000 0012356689999999999999999999876
No 290
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=1.6e-34 Score=313.21 Aligned_cols=261 Identities=20% Similarity=0.223 Sum_probs=196.5
Q ss_pred ccccceEEeeeceEEEEEEEec-CCceEEEEEecccC--cccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEE
Q 002278 617 NLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQY--PHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDY 693 (943)
Q Consensus 617 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 693 (943)
+|+..+.||+|+||.||+|..+ +|+.||+|++.... ......+.+|+++++.++||||+++++++.+....++++||
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY 80 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence 4778889999999999999976 57889999886432 22335677899999999999999999999999999999999
Q ss_pred ccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCC
Q 002278 694 MVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMP 773 (943)
Q Consensus 694 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~ 773 (943)
+. ++|.+++.. ....+++..+..++.||++||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 81 ~~-~~l~~~~~~--~~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~ 154 (284)
T cd07839 81 CD-QDLKKYFDS--CNGDIDPEIVKSFMFQLLKGLAFCHSH---NVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVR 154 (284)
T ss_pred CC-CCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEcCCCcEEECccchhhccCCCCC
Confidence 96 578777653 235689999999999999999999999 999999999999999999999999999986543322
Q ss_pred ceeeeEecccceeCccccccC-CCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHH-Hhcccccccc-----------
Q 002278 774 HASTFVLGTIGYIDPEYAHTS-RLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIM-SKADDNTVME----------- 840 (943)
Q Consensus 774 ~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~-~~~~~~~~~~----------- 840 (943)
. .....++..|+|||++.+. .++.++||||+||++|||+||+.|+....+...... ..........
T Consensus 155 ~-~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (284)
T cd07839 155 C-YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPD 233 (284)
T ss_pred C-cCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhccc
Confidence 1 1223478899999988764 478999999999999999999888654333222211 1110000000
Q ss_pred -ccCcccccCc----cCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 002278 841 -AVDPEVSVTC----VDLSAVRKTFQLALLCTKRYPSERPTMQEVARVL 884 (943)
Q Consensus 841 -~~~~~~~~~~----~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L 884 (943)
...+...... ........+.+++.+|++.||++|||+.++++|.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h~ 282 (284)
T cd07839 234 YKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHP 282 (284)
T ss_pred ccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcCC
Confidence 0000000000 0001224667899999999999999999998863
No 291
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=4.4e-35 Score=337.52 Aligned_cols=256 Identities=24% Similarity=0.334 Sum_probs=195.0
Q ss_pred HHHhhccccceEEeeeceEEEEEEEec-CCceEEEEEeccc-CcccHHHHHHHHHHHhcCCCCCcceeeeEEecCC----
Q 002278 612 MRSTENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQ-YPHNLREFETELETIGSIRHRNIVSLHGYALSPY---- 685 (943)
Q Consensus 612 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~---- 685 (943)
.+...+|++...||+||||.||+++.+ ||+.|||||+.-. .......+.+|+..+++++|||||+++..+.+..
T Consensus 475 SRY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~ 554 (1351)
T KOG1035|consen 475 SRYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELT 554 (1351)
T ss_pred hhHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccc
Confidence 466778888999999999999999988 8999999999644 3445667889999999999999999977642110
Q ss_pred --------------------------------------------------------------------------------
Q 002278 686 -------------------------------------------------------------------------------- 685 (943)
Q Consensus 686 -------------------------------------------------------------------------------- 685 (943)
T Consensus 555 ~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS 634 (1351)
T KOG1035|consen 555 VLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTS 634 (1351)
T ss_pred cccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccccc
Confidence
Q ss_pred -----------------------------------cceEEEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHH
Q 002278 686 -----------------------------------GNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAY 730 (943)
Q Consensus 686 -----------------------------------~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~ 730 (943)
..||-||||+...+.++++..... -.....++++++|++||+|
T Consensus 635 ~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~--~~~d~~wrLFreIlEGLaY 712 (1351)
T KOG1035|consen 635 DSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFN--SQRDEAWRLFREILEGLAY 712 (1351)
T ss_pred ccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccc--hhhHHHHHHHHHHHHHHHH
Confidence 026678888888888887632111 1467789999999999999
Q ss_pred hhhCCCCCeEecCCCCccEEECCCCceeecccccccccC-----------------CCCCceeeeEecccceeCcccccc
Q 002278 731 LHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIP-----------------TAMPHASTFVLGTIGYIDPEYAHT 793 (943)
Q Consensus 731 LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~-----------------~~~~~~~~~~~gt~~y~aPE~~~~ 793 (943)
+|+. |||||||||.||+++++..|||+|||+|+... .......+..+||.-|+|||++.+
T Consensus 713 IH~~---giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~ 789 (1351)
T KOG1035|consen 713 IHDQ---GIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSD 789 (1351)
T ss_pred HHhC---ceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcc
Confidence 9999 99999999999999999999999999998721 011112345679999999999887
Q ss_pred CC---CCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccccCccCHHHHHHHHHHHHHccCCC
Q 002278 794 SR---LNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAVRKTFQLALLCTKRY 870 (943)
Q Consensus 794 ~~---~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~d 870 (943)
.. |+.|+|+||+|||++||+. ||.............. .+.++.. +.+. ......-..+|++++++|
T Consensus 790 ~~~~~Yn~KiDmYSLGIVlFEM~y---PF~TsMERa~iL~~LR-~g~iP~~--~~f~-----~~~~~~e~slI~~Ll~hd 858 (1351)
T KOG1035|consen 790 TSSNKYNSKIDMYSLGIVLFEMLY---PFGTSMERASILTNLR-KGSIPEP--ADFF-----DPEHPEEASLIRWLLSHD 858 (1351)
T ss_pred cccccccchhhhHHHHHHHHHHhc---cCCchHHHHHHHHhcc-cCCCCCC--cccc-----cccchHHHHHHHHHhcCC
Confidence 54 9999999999999999984 5765544333333222 3333332 1111 112233457899999999
Q ss_pred CCCCCCHHHHHHH
Q 002278 871 PSERPTMQEVARV 883 (943)
Q Consensus 871 P~~RPt~~el~~~ 883 (943)
|++||||.|++..
T Consensus 859 P~kRPtA~eLL~s 871 (1351)
T KOG1035|consen 859 PSKRPTATELLNS 871 (1351)
T ss_pred CccCCCHHHHhhc
Confidence 9999999999875
No 292
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=6.9e-34 Score=305.59 Aligned_cols=253 Identities=25% Similarity=0.341 Sum_probs=201.2
Q ss_pred ccccceEEeeeceEEEEEEEecC--CceEEEEEecccC----------cccHHHHHHHHHHHhc-CCCCCcceeeeEEec
Q 002278 617 NLSEKYIVGYGASSTVYKCALKN--SRPIAVKKLYNQY----------PHNLREFETELETIGS-IRHRNIVSLHGYALS 683 (943)
Q Consensus 617 ~~~~~~~lG~G~~g~Vy~~~~~~--~~~vavK~~~~~~----------~~~~~~~~~E~~~l~~-l~h~niv~l~~~~~~ 683 (943)
.|+..+.||+|+||.||+|.++. ++.+|+|.+.... .....++.+|+.++.+ ++||||+++++++.+
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 36778889999999999999875 6789999875321 2233456778888765 789999999999999
Q ss_pred CCcceEEEEEccCCChhhhccCC-CCCccCCHHHHHHHHHHHHHHHHHhhh-CCCCCeEecCCCCccEEECCCCceeecc
Q 002278 684 PYGNLLFYDYMVNGSLWDLLHGP-SKKVKLDWETRLKIAVGAAQGLAYLHH-DCNPRIIHRDVKSSNILIDENFDAHLSD 761 (943)
Q Consensus 684 ~~~~~lv~e~~~~g~L~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~ivH~Dlkp~Nill~~~~~~kl~D 761 (943)
++..+++|||+++++|.+++... .....+++..++.++.|++.|+.|||+ . +++||||+|+||++++++.++|+|
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---~i~H~dl~~~nil~~~~~~~~l~d 157 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEK---RIVHRDLTPNNIMLGEDDKVTITD 157 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCC---ceeecCCCHHHEEECCCCcEEEec
Confidence 99999999999999999987431 234568999999999999999999996 5 899999999999999999999999
Q ss_pred cccccccCCCCCceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccc
Q 002278 762 FGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEA 841 (943)
Q Consensus 762 FGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 841 (943)
||.+....... ......|+..|+|||...+..++.++||||||+++|||++|+.||..................
T Consensus 158 fg~~~~~~~~~--~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~---- 231 (269)
T cd08528 158 FGLAKQKQPES--KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVEAVYE---- 231 (269)
T ss_pred ccceeeccccc--ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHHHhhccCC----
Confidence 99998765432 223445899999999999888999999999999999999999999765443322221111111
Q ss_pred cCcccccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 002278 842 VDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLV 885 (943)
Q Consensus 842 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~ 885 (943)
+ .. .......+.+++.+||+.||++||++.|+.++++
T Consensus 232 --~-~~----~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 232 --P-LP----EGMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred --c-CC----cccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 0 00 0011246778999999999999999999999875
No 293
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=5.6e-34 Score=312.11 Aligned_cols=252 Identities=22% Similarity=0.253 Sum_probs=197.7
Q ss_pred ccccceEEeeeceEEEEEEEec-CCceEEEEEecccC---cccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEE
Q 002278 617 NLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQY---PHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYD 692 (943)
Q Consensus 617 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 692 (943)
+|+..+.||+|+||.||++..+ .++.||+|.+.... ......+.+|+++++.++||||+++++++..++..++|||
T Consensus 2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (305)
T cd05609 2 DFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVME 81 (305)
T ss_pred CceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEEe
Confidence 6788899999999999999976 46789999886543 2234567889999999999999999999999999999999
Q ss_pred EccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCC
Q 002278 693 YMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAM 772 (943)
Q Consensus 693 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~ 772 (943)
|+++++|.+++.. ...+++..+..++.|++.|++|||+. +++||||||+||+++.++.+|++|||+++......
T Consensus 82 ~~~g~~L~~~l~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~ 155 (305)
T cd05609 82 YVEGGDCATLLKN---IGALPVDMARMYFAETVLALEYLHNY---GIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSL 155 (305)
T ss_pred cCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHEEECCCCCEEEeeCCCccccCcCc
Confidence 9999999999963 35689999999999999999999999 99999999999999999999999999987421110
Q ss_pred C--------------ceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhcccccc
Q 002278 773 P--------------HASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTV 838 (943)
Q Consensus 773 ~--------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~ 838 (943)
. .......|+..|+|||.+.+..++.++|+|||||++|||++|+.||.+.................
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~~~~~~~~~ 235 (305)
T cd05609 156 TTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEW 235 (305)
T ss_pred cccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCC
Confidence 0 01112347889999999988889999999999999999999999998654432222221111111
Q ss_pred ccccCcccccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 002278 839 MEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVL 884 (943)
Q Consensus 839 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L 884 (943)
+. ..+ .....+.+++.+||+.+|++||++.++.+.+
T Consensus 236 ~~-~~~---------~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll 271 (305)
T cd05609 236 PE-GDE---------ALPADAQDLISRLLRQNPLERLGTGGAFEVK 271 (305)
T ss_pred CC-ccc---------cCCHHHHHHHHHHhccChhhccCccCHHHHH
Confidence 11 000 1124567999999999999999854444333
No 294
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=5.4e-34 Score=310.16 Aligned_cols=263 Identities=22% Similarity=0.253 Sum_probs=198.6
Q ss_pred HhhccccceEEeeeceEEEEEEEec-CCceEEEEEecccC-cccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEE
Q 002278 614 STENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQY-PHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFY 691 (943)
Q Consensus 614 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 691 (943)
+++.|...+.||+|+||.||+|..+ +++.||+|.+.... ......+.+|+++++.++|+||+++++++..++..++||
T Consensus 3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 82 (291)
T cd07870 3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVF 82 (291)
T ss_pred ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEE
Confidence 4578999999999999999999875 57899999986543 233346778999999999999999999999999999999
Q ss_pred EEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCC
Q 002278 692 DYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTA 771 (943)
Q Consensus 692 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~ 771 (943)
||+. +++.+.+.. ....+.+..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 83 e~~~-~~l~~~~~~--~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~ 156 (291)
T cd07870 83 EYMH-TDLAQYMIQ--HPGGLHPYNVRLFMFQLLRGLAYIHGQ---HILHRDLKPQNLLISYLGELKLADFGLARAKSIP 156 (291)
T ss_pred eccc-CCHHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEEcCCCcEEEeccccccccCCC
Confidence 9995 677766642 234578888999999999999999999 9999999999999999999999999999764332
Q ss_pred CCceeeeEecccceeCcccccc-CCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhcc-cccc-----------
Q 002278 772 MPHASTFVLGTIGYIDPEYAHT-SRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKAD-DNTV----------- 838 (943)
Q Consensus 772 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~-~~~~----------- 838 (943)
... .....+++.|+|||++.+ ..++.++|||||||++|||++|+.||+.............. .+..
T Consensus 157 ~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (291)
T cd07870 157 SQT-YSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKL 235 (291)
T ss_pred CCC-CCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhc
Confidence 111 122347899999999876 45788999999999999999999999865443222111110 0000
Q ss_pred ---cccc-----CcccccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002278 839 ---MEAV-----DPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARV 883 (943)
Q Consensus 839 ---~~~~-----~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~ 883 (943)
.... .+..............+.+++.+|+..||++|||+.|++.|
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h 288 (291)
T cd07870 236 PNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLH 288 (291)
T ss_pred ccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcC
Confidence 0000 00000000001113466789999999999999999999876
No 295
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=3.8e-34 Score=309.88 Aligned_cols=260 Identities=22% Similarity=0.336 Sum_probs=203.9
Q ss_pred CHHHHHHHhhccccceEEeeeceEEEEEEEec-CCceEEEEEecccCcccHHHHHHHHHHHhcC-CCCCcceeeeEEec-
Q 002278 607 TFDDIMRSTENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQYPHNLREFETELETIGSI-RHRNIVSLHGYALS- 683 (943)
Q Consensus 607 ~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~- 683 (943)
+..++..+.+.|+..+.||+|+||.||+|.+. .++.+|+|.+... .....++..|+.+++++ +||||+++++++..
T Consensus 7 ~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~-~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~ 85 (282)
T cd06636 7 DLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVT-EDEEEEIKLEINMLKKYSHHRNIATYYGAFIKK 85 (282)
T ss_pred hhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecC-hHHHHHHHHHHHHHHHhcCCCcEEEEeeehhcc
Confidence 45556667789999999999999999999975 5678899987543 23446788899999998 69999999999853
Q ss_pred -----CCcceEEEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCcee
Q 002278 684 -----PYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAH 758 (943)
Q Consensus 684 -----~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~k 758 (943)
....+++|||+++|+|.+++.... ...+++..+..++.|++.|++|||+. +|+||||||+||++++++.++
T Consensus 86 ~~~~~~~~~~iv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dl~~~nili~~~~~~~ 161 (282)
T cd06636 86 SPPGHDDQLWLVMEFCGAGSVTDLVKNTK-GNALKEDWIAYICREILRGLAHLHAH---KVIHRDIKGQNVLLTENAEVK 161 (282)
T ss_pred cccCCCCEEEEEEEeCCCCcHHHHHHHcc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEE
Confidence 346799999999999999886432 34578888999999999999999999 999999999999999999999
Q ss_pred ecccccccccCCCCCceeeeEecccceeCccccc-----cCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhc
Q 002278 759 LSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAH-----TSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKA 833 (943)
Q Consensus 759 l~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~ 833 (943)
|+|||++........ ......|++.|+|||.+. +..++.++|||||||++|||++|+.||..............
T Consensus 162 l~dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~~~~ 240 (282)
T cd06636 162 LVDFGVSAQLDRTVG-RRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFLIPR 240 (282)
T ss_pred EeeCcchhhhhcccc-CCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhhhHhh
Confidence 999999876543222 122345899999999875 34578899999999999999999999976544333222111
Q ss_pred cccccccccCcccccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002278 834 DDNTVMEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARV 883 (943)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~ 883 (943)
. ..+.... ......+.+++..||+.||.+|||+.|++++
T Consensus 241 ~-------~~~~~~~----~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~ 279 (282)
T cd06636 241 N-------PPPKLKS----KKWSKKFIDFIEGCLVKNYLSRPSTEQLLKH 279 (282)
T ss_pred C-------CCCCCcc----cccCHHHHHHHHHHhCCChhhCcCHHHHhcC
Confidence 1 0111110 0123567899999999999999999999876
No 296
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=4.1e-34 Score=307.37 Aligned_cols=248 Identities=29% Similarity=0.416 Sum_probs=197.0
Q ss_pred EEeeeceEEEEEEEecC-------CceEEEEEecccC-cccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEEc
Q 002278 623 IVGYGASSTVYKCALKN-------SRPIAVKKLYNQY-PHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYM 694 (943)
Q Consensus 623 ~lG~G~~g~Vy~~~~~~-------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 694 (943)
.||+|+||.||+|..++ +..+|+|.+.... ......+.+|+++++.++||||+++++++...+..++||||+
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 81 (269)
T cd05044 2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMELM 81 (269)
T ss_pred ccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEecc
Confidence 58999999999998653 2568999875443 244667889999999999999999999999999999999999
Q ss_pred cCCChhhhccCCC----CCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCC-----ceeecccccc
Q 002278 695 VNGSLWDLLHGPS----KKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENF-----DAHLSDFGIA 765 (943)
Q Consensus 695 ~~g~L~~~l~~~~----~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~-----~~kl~DFGla 765 (943)
++|+|.+++.... ....+++.++..++.|++.|++|||+. +++|+||||+||+++.++ .++++|||++
T Consensus 82 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~ 158 (269)
T cd05044 82 EGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQM---HFIHRDLAARNCLVSEKGYDADRVVKIGDFGLA 158 (269)
T ss_pred CCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhC---CcccCCCChheEEEecCCCCCCcceEECCcccc
Confidence 9999999986321 223478999999999999999999998 999999999999999877 8999999999
Q ss_pred cccCCCCC-ceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCccHHHHHHHhccccccccccC
Q 002278 766 RCIPTAMP-HASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKADDNTVMEAVD 843 (943)
Q Consensus 766 ~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 843 (943)
+....... .......++..|+|||++.+..++.++|||||||++|||+| |+.||.............. ....
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~~~~-~~~~----- 232 (269)
T cd05044 159 RDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHVTA-GGRL----- 232 (269)
T ss_pred cccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHHHhc-CCcc-----
Confidence 76533211 11112235678999999999999999999999999999998 9999976554433222211 1100
Q ss_pred cccccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 002278 844 PEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLV 885 (943)
Q Consensus 844 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~ 885 (943)
... ......+.+++.+||..+|++||+++++.+.|.
T Consensus 233 -~~~-----~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 268 (269)
T cd05044 233 -QKP-----ENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQ 268 (269)
T ss_pred -CCc-----ccchHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 011 012356779999999999999999999999875
No 297
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=9.3e-34 Score=303.66 Aligned_cols=250 Identities=27% Similarity=0.410 Sum_probs=207.5
Q ss_pred ccccceEEeeeceEEEEEEEecC-CceEEEEEecccCc-ccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEEc
Q 002278 617 NLSEKYIVGYGASSTVYKCALKN-SRPIAVKKLYNQYP-HNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYM 694 (943)
Q Consensus 617 ~~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 694 (943)
+|+..+.||+|++|.||+|..+. ++.||+|++..... .....+.+|++++++++||||+++++++..+...++||||+
T Consensus 2 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (264)
T cd06623 2 DLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEYM 81 (264)
T ss_pred cceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEec
Confidence 57888999999999999999874 88999999866543 44678999999999999999999999999999999999999
Q ss_pred cCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhh-CCCCCeEecCCCCccEEECCCCceeecccccccccCCCCC
Q 002278 695 VNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHH-DCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMP 773 (943)
Q Consensus 695 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~ 773 (943)
++++|.+++.. ...+++..+..++.|+++|++|||+ . +++||||+|+||+++.++.++|+|||.+........
T Consensus 82 ~~~~L~~~l~~---~~~l~~~~~~~~~~~l~~~l~~lh~~~---~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~ 155 (264)
T cd06623 82 DGGSLADLLKK---VGKIPEPVLAYIARQILKGLDYLHTKR---HIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLD 155 (264)
T ss_pred CCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHhccC---CCccCCCCHHHEEECCCCCEEEccCccceecccCCC
Confidence 99999999963 3668999999999999999999999 8 999999999999999999999999999987654332
Q ss_pred ceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCc--cHHHHHHHhccccccccccCcccccCcc
Q 002278 774 HASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNES--NLHQLIMSKADDNTVMEAVDPEVSVTCV 851 (943)
Q Consensus 774 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 851 (943)
.. ....++..|+|||...+..++.++|+||||+++|+|+||+.||.... ............. .+.....
T Consensus 156 ~~-~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~------~~~~~~~-- 226 (264)
T cd06623 156 QC-NTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICDGP------PPSLPAE-- 226 (264)
T ss_pred cc-cceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHhcCC------CCCCCcc--
Confidence 22 23458899999999999899999999999999999999999998664 3333222222111 1111111
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002278 852 DLSAVRKTFQLALLCTKRYPSERPTMQEVARV 883 (943)
Q Consensus 852 ~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~ 883 (943)
.....+.+++..|++.+|++||++.+++++
T Consensus 227 --~~~~~l~~li~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 227 --EFSPEFRDFISACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred --cCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 022577899999999999999999999986
No 298
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=6.1e-34 Score=309.80 Aligned_cols=262 Identities=23% Similarity=0.285 Sum_probs=198.3
Q ss_pred hhccccceEEeeeceEEEEEEEec-CCceEEEEEecccCc-ccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEE
Q 002278 615 TENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQYP-HNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYD 692 (943)
Q Consensus 615 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 692 (943)
.++|+..+.||+|++|.||+|..+ +++.||+|.+..... .....+.+|+++++.++||||+++++++.+++..++|||
T Consensus 4 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 83 (291)
T cd07844 4 LETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFE 83 (291)
T ss_pred ccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEe
Confidence 367888999999999999999976 578999999864332 223456789999999999999999999999999999999
Q ss_pred EccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCC
Q 002278 693 YMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAM 772 (943)
Q Consensus 693 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~ 772 (943)
|++ ++|.+++... ...+++..+..++.|+++||+|||+. +|+||||||+||++++++.+||+|||+++......
T Consensus 84 ~~~-~~L~~~~~~~--~~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~ 157 (291)
T cd07844 84 YLD-TDLKQYMDDC--GGGLSMHNVRLFLFQLLRGLAYCHQR---RVLHRDLKPQNLLISERGELKLADFGLARAKSVPS 157 (291)
T ss_pred cCC-CCHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCHHHEEEcCCCCEEECccccccccCCCC
Confidence 997 5899888632 34688999999999999999999999 99999999999999999999999999987543221
Q ss_pred CceeeeEecccceeCcccccc-CCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHH-HhccccccccccCcc-----
Q 002278 773 PHASTFVLGTIGYIDPEYAHT-SRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIM-SKADDNTVMEAVDPE----- 845 (943)
Q Consensus 773 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~----- 845 (943)
.. .....++..|+|||+..+ ..++.++||||+||++|||++|+.||........... .............+.
T Consensus 158 ~~-~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (291)
T cd07844 158 KT-YSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNP 236 (291)
T ss_pred cc-ccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhcc
Confidence 11 122246889999998875 4588999999999999999999999976542222111 111000000000000
Q ss_pred --------------cccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002278 846 --------------VSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARV 883 (943)
Q Consensus 846 --------------~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~ 883 (943)
+..............+++..|++.+|++|||+.+++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~ 288 (291)
T cd07844 237 EFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKH 288 (291)
T ss_pred ccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcC
Confidence 00000001111456789999999999999999999875
No 299
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=5e-34 Score=306.51 Aligned_cols=253 Identities=25% Similarity=0.376 Sum_probs=200.5
Q ss_pred ccccceEEeeeceEEEEEEEec-CCceEEEEEecccCc------ccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceE
Q 002278 617 NLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQYP------HNLREFETELETIGSIRHRNIVSLHGYALSPYGNLL 689 (943)
Q Consensus 617 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 689 (943)
+|+..+.||+|++|.||+|... +++.||+|++..... ...+.+.+|++++++++||||+++++++.+.+..++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 4778889999999999999864 678999998864331 134578899999999999999999999999999999
Q ss_pred EEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCC-ceeeccccccccc
Q 002278 690 FYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENF-DAHLSDFGIARCI 768 (943)
Q Consensus 690 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~-~~kl~DFGla~~~ 768 (943)
||||+++++|.+++. ....+++..+..++.|++.||+|||+. +++||||||+||+++.++ .+||+|||.+..+
T Consensus 81 v~e~~~~~~L~~~l~---~~~~~~~~~~~~~~~ql~~al~~LH~~---~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~ 154 (268)
T cd06630 81 FVEWMAGGSVSHLLS---KYGAFKEAVIINYTEQLLRGLSYLHEN---QIIHRDVKGANLLIDSTGQRLRIADFGAAARL 154 (268)
T ss_pred EEeccCCCcHHHHHH---HhCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEccccccccc
Confidence 999999999999986 344688999999999999999999999 999999999999998776 5999999999876
Q ss_pred CCCCCc---eeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcc
Q 002278 769 PTAMPH---ASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPE 845 (943)
Q Consensus 769 ~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 845 (943)
...... ......|+..|+|||.+.+..++.++||||+|+++|+|++|+.||................. ....+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~ 231 (268)
T cd06630 155 AAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIAS---ATTAPS 231 (268)
T ss_pred ccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhc---cCCCCC
Confidence 443211 12234588999999999888899999999999999999999999975432211111110000 000111
Q ss_pred cccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002278 846 VSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARV 883 (943)
Q Consensus 846 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~ 883 (943)
++ ......+.+++..|+..+|++||++.+++++
T Consensus 232 ~~-----~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~ 264 (268)
T cd06630 232 IP-----EHLSPGLRDVTLRCLELQPEDRPPSRELLKH 264 (268)
T ss_pred Cc-----hhhCHHHHHHHHHHcCCCcccCcCHHHHhcC
Confidence 11 1123567789999999999999999999876
No 300
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=8.3e-34 Score=304.59 Aligned_cols=252 Identities=19% Similarity=0.303 Sum_probs=189.0
Q ss_pred EEeeeceEEEEEEEecCCc---eEEEEEecccC-cccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEEccCCC
Q 002278 623 IVGYGASSTVYKCALKNSR---PIAVKKLYNQY-PHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGS 698 (943)
Q Consensus 623 ~lG~G~~g~Vy~~~~~~~~---~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 698 (943)
.||+|+||+||+|...++. .+++|.+.... ....+.+.+|+..++.++||||+++++++......++||||+++|+
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 81 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGD 81 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCc
Confidence 5899999999999865433 45566654432 2345678999999999999999999999999999999999999999
Q ss_pred hhhhccCCCC-CccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCC-Ccee
Q 002278 699 LWDLLHGPSK-KVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAM-PHAS 776 (943)
Q Consensus 699 L~~~l~~~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~-~~~~ 776 (943)
|.+++..... ....++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++....... ....
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~ 158 (268)
T cd05086 82 LKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKH---NFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETE 158 (268)
T ss_pred HHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CeeccCCccceEEEcCCccEEecccccccccCcchhhhcc
Confidence 9999864321 23467778889999999999999998 99999999999999999999999999986432211 1112
Q ss_pred eeEecccceeCcccccc-------CCCCCcchhhhHHHHHHHHHh-CCCCCCCCccHHHHHHHhccccccccccCccccc
Q 002278 777 TFVLGTIGYIDPEYAHT-------SRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSV 848 (943)
Q Consensus 777 ~~~~gt~~y~aPE~~~~-------~~~~~~~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 848 (943)
....|+..|+|||+... ..++.++|||||||++|||++ |..||................ .....+|.+..
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 236 (268)
T cd05086 159 DDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQ--QVKLFKPQLEL 236 (268)
T ss_pred cCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhc--ccccCCCccCC
Confidence 23457889999998753 245789999999999999997 577887655443333222111 11122233221
Q ss_pred CccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 002278 849 TCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLV 885 (943)
Q Consensus 849 ~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~ 885 (943)
. ....+.+++..|| .+|++||+++++++.|.
T Consensus 237 ~-----~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 237 P-----YSERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred C-----CcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 1 1245667889999 57999999999988763
No 301
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=1.2e-33 Score=301.04 Aligned_cols=247 Identities=24% Similarity=0.406 Sum_probs=198.8
Q ss_pred hccccceEEeeeceEEEEEEEecCCceEEEEEecccCcccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEEcc
Q 002278 616 ENLSEKYIVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMV 695 (943)
Q Consensus 616 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 695 (943)
+.|+..+.||+|+||.||++.. .++.||+|.+... .....+.+|+.+++.++|||++++++++..+ ..+++|||++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~--~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e~~~ 81 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCD--VTAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVMELMS 81 (254)
T ss_pred HHceeeeeeccCCCCceEeccc-CCCceEEEeecCc--chHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEECCC
Confidence 5688899999999999999875 4778999988543 2346788999999999999999999998764 5799999999
Q ss_pred CCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCCce
Q 002278 696 NGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHA 775 (943)
Q Consensus 696 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~~~ 775 (943)
+|+|.+++... ....+++.++..++.|++.|++|||+. +++||||||+||+++.++.+||+|||+++.......
T Consensus 82 ~~~L~~~l~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~---~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~~-- 155 (254)
T cd05083 82 KGNLVNFLRTR-GRALVSVIQLLQFSLDVAEGMEYLESK---KLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGVD-- 155 (254)
T ss_pred CCCHHHHHHhc-CcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCcEEECCCccceeccccCC--
Confidence 99999998643 234588999999999999999999998 999999999999999999999999999976432211
Q ss_pred eeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCccHHHHHHHhccccccccccCcccccCccCHH
Q 002278 776 STFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLS 854 (943)
Q Consensus 776 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 854 (943)
....+..|+|||.+.+..++.++|+|||||++|||++ |+.||........ ......... .+ ..+ .
T Consensus 156 --~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~-~~~~~~~~~-~~-~~~---------~ 221 (254)
T cd05083 156 --NSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEV-KECVEKGYR-ME-PPE---------G 221 (254)
T ss_pred --CCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHH-HHHHhCCCC-CC-CCC---------c
Confidence 1224568999999998899999999999999999998 9999976544322 222211111 00 011 1
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHHHhh
Q 002278 855 AVRKTFQLALLCTKRYPSERPTMQEVARVLVS 886 (943)
Q Consensus 855 ~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~ 886 (943)
....+.+++.+||+.+|++||+++++++.++.
T Consensus 222 ~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 222 CPADVYVLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred CCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 12467799999999999999999999998753
No 302
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=1.5e-33 Score=300.66 Aligned_cols=249 Identities=24% Similarity=0.356 Sum_probs=202.5
Q ss_pred ccccceEEeeeceEEEEEEEec-CCceEEEEEecccC--cccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEE
Q 002278 617 NLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQY--PHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDY 693 (943)
Q Consensus 617 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 693 (943)
+|+..+.||+|+||.||+|... +++.+|+|.+.... ......+.+|+++++.++||||+++++.+..++..++||||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY 80 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence 4788899999999999999975 57889999886442 33456788999999999999999999999999999999999
Q ss_pred ccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCC-CceeecccccccccCCCC
Q 002278 694 MVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDEN-FDAHLSDFGIARCIPTAM 772 (943)
Q Consensus 694 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~-~~~kl~DFGla~~~~~~~ 772 (943)
+++++|.+++... ....+++..+.+++.+++.|++|||++ +++||||||+||+++++ +.+|++|||.+.......
T Consensus 81 ~~~~~L~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~ 156 (256)
T cd08220 81 APGGTLAEYIQKR-CNSLLDEDTILHFFVQILLALHHVHTK---LILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKS 156 (256)
T ss_pred CCCCCHHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCc
Confidence 9999999999642 234589999999999999999999999 99999999999999854 468999999998765432
Q ss_pred CceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccccCccC
Q 002278 773 PHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVD 852 (943)
Q Consensus 773 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 852 (943)
. .....|+..|+|||...+..++.++||||||+++|+|++|+.||.................. .....
T Consensus 157 ~--~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~------- 224 (256)
T cd08220 157 K--AYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMSGTFA---PISDR------- 224 (256)
T ss_pred c--ccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHHhcCCC---CCCCC-------
Confidence 2 12245889999999999888999999999999999999999999876543332222211110 11111
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002278 853 LSAVRKTFQLALLCTKRYPSERPTMQEVARV 883 (943)
Q Consensus 853 ~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~ 883 (943)
....+.+++..||+.+|++|||+.+++++
T Consensus 225 --~~~~l~~li~~~l~~~p~~Rpt~~~ll~~ 253 (256)
T cd08220 225 --YSPDLRQLILSMLNLDPSKRPQLSQIMAQ 253 (256)
T ss_pred --cCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 12457789999999999999999999876
No 303
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=4.6e-34 Score=306.26 Aligned_cols=251 Identities=27% Similarity=0.400 Sum_probs=203.6
Q ss_pred ccccceEEeeeceEEEEEEEec-CCceEEEEEecccC-cccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEEc
Q 002278 617 NLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQY-PHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYM 694 (943)
Q Consensus 617 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 694 (943)
+|+..+.||+|+||.||+|.++ +++.||+|.+.... ....+++.+|+++++.++||||+++++++..+...++++||+
T Consensus 2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (265)
T cd06605 2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYM 81 (265)
T ss_pred cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEec
Confidence 5677788999999999999987 57889999886553 344567889999999999999999999999999999999999
Q ss_pred cCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhh-CCCCCeEecCCCCccEEECCCCceeecccccccccCCCCC
Q 002278 695 VNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHH-DCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMP 773 (943)
Q Consensus 695 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~ 773 (943)
++++|.+++... ...+++..+..++.|++.|++|||+ . +++||||||+||++++++.++|+|||.+........
T Consensus 82 ~~~~L~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lH~~~---~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~ 156 (265)
T cd06605 82 DGGSLDKILKEV--QGRIPERILGKIAVAVLKGLTYLHEKH---KIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLA 156 (265)
T ss_pred CCCcHHHHHHHc--cCCCCHHHHHHHHHHHHHHHHHHcCCC---CeecCCCCHHHEEECCCCCEEEeecccchhhHHHHh
Confidence 999999998742 2578999999999999999999999 7 999999999999999999999999999876533221
Q ss_pred ceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCc----cHHHHHHHhccccccccccCcccccC
Q 002278 774 HASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNES----NLHQLIMSKADDNTVMEAVDPEVSVT 849 (943)
Q Consensus 774 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 849 (943)
.. ..|+..|+|||...+..++.++||||+|+++|+|++|+.||.... ............ ..+.....
T Consensus 157 ~~---~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~ 227 (265)
T cd06605 157 KT---FVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNE------PPPRLPSG 227 (265)
T ss_pred hc---ccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcC------CCCCCChh
Confidence 11 558899999999999999999999999999999999999997542 222222211111 11111111
Q ss_pred ccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 002278 850 CVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLV 885 (943)
Q Consensus 850 ~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~ 885 (943)
.....+.+++..||..+|++|||+.+++.+-+
T Consensus 228 ----~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~ 259 (265)
T cd06605 228 ----KFSPDFQDFVNLCLIKDPRERPSYKELLEHPF 259 (265)
T ss_pred ----hcCHHHHHHHHHHcCCCchhCcCHHHHhhCch
Confidence 02346778999999999999999999988743
No 304
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=1.5e-33 Score=309.30 Aligned_cols=267 Identities=23% Similarity=0.254 Sum_probs=204.8
Q ss_pred HhhccccceEEeeeceEEEEEEEec-CCceEEEEEecccCc--ccHHHHHHHHHHHhcCCCCCcceeeeEEecC--Ccce
Q 002278 614 STENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQYP--HNLREFETELETIGSIRHRNIVSLHGYALSP--YGNL 688 (943)
Q Consensus 614 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~ 688 (943)
..++|+..+.||+|+||.||+|.++ +++.||+|++..... .....+.+|++++++++|+||+++++++... +..+
T Consensus 5 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (309)
T cd07845 5 SVTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIF 84 (309)
T ss_pred cccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEE
Confidence 4578999999999999999999976 588999998864332 2233566899999999999999999998765 4579
Q ss_pred EEEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeeccccccccc
Q 002278 689 LFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCI 768 (943)
Q Consensus 689 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~ 768 (943)
+||||+. ++|.+++... ...+++.++..++.|++.|++|||+. +++||||||+||++++++.+||+|||.+...
T Consensus 85 lv~e~~~-~~l~~~l~~~--~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~ 158 (309)
T cd07845 85 LVMEYCE-QDLASLLDNM--PTPFSESQVKCLMLQLLRGLQYLHEN---FIIHRDLKVSNLLLTDKGCLKIADFGLARTY 158 (309)
T ss_pred EEEecCC-CCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccceeeec
Confidence 9999996 5788887632 35689999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCceeeeEecccceeCcccccc-CCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCccc-
Q 002278 769 PTAMPHASTFVLGTIGYIDPEYAHT-SRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEV- 846 (943)
Q Consensus 769 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 846 (943)
...... .....++..|+|||.+.+ ..++.++||||+||++|||++|++||...+............+......++.+
T Consensus 159 ~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (309)
T cd07845 159 GLPAKP-MTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFS 237 (309)
T ss_pred CCccCC-CCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhh
Confidence 543222 222346788999998875 45789999999999999999999999877665554433332211111111100
Q ss_pred --------cc---CccC-----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhc
Q 002278 847 --------SV---TCVD-----LSAVRKTFQLALLCTKRYPSERPTMQEVARVLVSL 887 (943)
Q Consensus 847 --------~~---~~~~-----~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~~ 887 (943)
.. .... ......+.+++..|++.||++|||+.++++|-+-.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~~f~ 294 (309)
T cd07845 238 DLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYFK 294 (309)
T ss_pred cccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcChhhc
Confidence 00 0000 00134567899999999999999999999986643
No 305
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=1.2e-33 Score=306.43 Aligned_cols=256 Identities=26% Similarity=0.408 Sum_probs=202.3
Q ss_pred hccccceEEeeeceEEEEEEEec-----CCceEEEEEecccCcc-cHHHHHHHHHHHhcCCCCCcceeeeEEec--CCcc
Q 002278 616 ENLSEKYIVGYGASSTVYKCALK-----NSRPIAVKKLYNQYPH-NLREFETELETIGSIRHRNIVSLHGYALS--PYGN 687 (943)
Q Consensus 616 ~~~~~~~~lG~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~ 687 (943)
+.|+..+.||+|+||.||+|... .+..||+|.+...... ..+.+.+|+++++.+.||||+++++++.. ....
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSL 83 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCce
Confidence 45677789999999999999854 3678999998755443 46789999999999999999999999877 5578
Q ss_pred eEEEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccc
Q 002278 688 LLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARC 767 (943)
Q Consensus 688 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~ 767 (943)
+++|||+++++|.+++... ...+++.++..++.|++.||+|||+. +++||||||+||+++.++.++|+|||.+..
T Consensus 84 ~lv~e~~~~~~l~~~l~~~--~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~ 158 (284)
T cd05038 84 RLIMEYLPSGSLRDYLQRH--RDQINLKRLLLFSSQICKGMDYLGSQ---RYIHRDLAARNILVESEDLVKISDFGLAKV 158 (284)
T ss_pred EEEEecCCCCCHHHHHHhC--ccccCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEcccccccc
Confidence 9999999999999999642 33589999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCce--eeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHH--------------HHHHH
Q 002278 768 IPTAMPHA--STFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLH--------------QLIMS 831 (943)
Q Consensus 768 ~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~--------------~~~~~ 831 (943)
........ .....++..|+|||...+..++.++||||||+++|||+||+.|+....... .+...
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (284)
T cd05038 159 LPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLEL 238 (284)
T ss_pred cccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHH
Confidence 65322211 111234567999999998899999999999999999999999986432211 01111
Q ss_pred hccccccccccCcccccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhc
Q 002278 832 KADDNTVMEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLVSL 887 (943)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~~ 887 (943)
...... ... ......++.+++.+|++.+|++|||+.|+++.|..+
T Consensus 239 ~~~~~~--------~~~---~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 239 LKEGER--------LPR---PPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred HHcCCc--------CCC---CccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 110000 000 011225688999999999999999999999999764
No 306
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=2.1e-33 Score=302.60 Aligned_cols=255 Identities=23% Similarity=0.382 Sum_probs=198.3
Q ss_pred cccceEEeeeceEEEEEEEec----CCceEEEEEecccC--cccHHHHHHHHHHHhcCCCCCcceeeeEEecCCc-----
Q 002278 618 LSEKYIVGYGASSTVYKCALK----NSRPIAVKKLYNQY--PHNLREFETELETIGSIRHRNIVSLHGYALSPYG----- 686 (943)
Q Consensus 618 ~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~----- 686 (943)
|...+.||+|+||.||+|.++ .++.||+|.+.... ....+++.+|+++++.++||||+++++++.....
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 456778999999999999864 35789999886542 2345678899999999999999999999865432
Q ss_pred -ceEEEEEccCCChhhhccCCC---CCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeeccc
Q 002278 687 -NLLFYDYMVNGSLWDLLHGPS---KKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDF 762 (943)
Q Consensus 687 -~~lv~e~~~~g~L~~~l~~~~---~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DF 762 (943)
.++++||+++|+|.+++.... ....+++..+..++.|++.|++|||+. +|+||||||+||++++++.+|++||
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~nili~~~~~~kl~df 157 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSK---NFIHRDLAARNCMLNENMTVCVADF 157 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccchhhEEEcCCCCEEECcc
Confidence 368899999999988764211 223578999999999999999999998 9999999999999999999999999
Q ss_pred ccccccCCCCCc-eeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCccHHHHHHHhcccccccc
Q 002278 763 GIARCIPTAMPH-ASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKADDNTVME 840 (943)
Q Consensus 763 Gla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~ 840 (943)
|.++........ ......+++.|++||......++.++|||||||++|||++ |++||............... ....
T Consensus 158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~-~~~~- 235 (273)
T cd05074 158 GLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIKG-NRLK- 235 (273)
T ss_pred cccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHcC-CcCC-
Confidence 999866432211 1112235678999999998889999999999999999999 89998765543322222211 1110
Q ss_pred ccCcccccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhc
Q 002278 841 AVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLVSL 887 (943)
Q Consensus 841 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~~ 887 (943)
..+ .....+.+++.+|++.+|++||++.++++.|+.+
T Consensus 236 -~~~---------~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 236 -QPP---------DCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred -CCC---------CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 011 1124678999999999999999999999999764
No 307
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=2.3e-33 Score=302.76 Aligned_cols=250 Identities=24% Similarity=0.377 Sum_probs=202.8
Q ss_pred hccccceEEeeeceEEEEEEEec-CCceEEEEEecccC-cccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEE
Q 002278 616 ENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQY-PHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDY 693 (943)
Q Consensus 616 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 693 (943)
+-|+..+.||+|+||.||+|... +++.||+|.+.... ....+.+.+|+.++++++||||+++++++..++..++||||
T Consensus 4 ~~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 83 (277)
T cd06641 4 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEY 83 (277)
T ss_pred HhhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEe
Confidence 35677888999999999999865 57889999875432 23446788999999999999999999999999999999999
Q ss_pred ccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCC
Q 002278 694 MVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMP 773 (943)
Q Consensus 694 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~ 773 (943)
+++++|.+++. ...+++..+..++.|++.|++|||+. +++|+||||+||+++.++.++++|||++........
T Consensus 84 ~~~~~l~~~i~----~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~ 156 (277)
T cd06641 84 LGGGSALDLLE----PGPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI 156 (277)
T ss_pred CCCCcHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHccC---CeecCCCCHHhEEECCCCCEEEeecccceecccchh
Confidence 99999999985 24589999999999999999999998 999999999999999999999999999876643321
Q ss_pred ceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccccCccCH
Q 002278 774 HASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDL 853 (943)
Q Consensus 774 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 853 (943)
......|+..|+|||...+..++.++|+|||||++|+|++|..||............... . .+.+..
T Consensus 157 -~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~-~------~~~~~~----- 223 (277)
T cd06641 157 -KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIPKN-N------PPTLEG----- 223 (277)
T ss_pred -hhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHHHhcC-C------CCCCCc-----
Confidence 122345788999999998888999999999999999999999999765433222221111 0 111111
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 002278 854 SAVRKTFQLALLCTKRYPSERPTMQEVARVLV 885 (943)
Q Consensus 854 ~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~ 885 (943)
.....+.+++..|++.+|++||++.+++++-+
T Consensus 224 ~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~ 255 (277)
T cd06641 224 NYSKPLKEFVEACLNKEPSFRPTAKELLKHKF 255 (277)
T ss_pred ccCHHHHHHHHHHccCChhhCcCHHHHHhCHH
Confidence 11245778999999999999999999999743
No 308
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=9.8e-36 Score=344.32 Aligned_cols=253 Identities=26% Similarity=0.338 Sum_probs=203.8
Q ss_pred hhccccceEEeeeceEEEEEEEec-CCceEEEEEecccC--cccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEE
Q 002278 615 TENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQY--PHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFY 691 (943)
Q Consensus 615 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 691 (943)
+-++.....||.|.||.||.|... .|.-.|+|-+.-.. ........+|+.++..++|||+|++||+-.+.+..+|.|
T Consensus 1234 ~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFM 1313 (1509)
T KOG4645|consen 1234 TFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFM 1313 (1509)
T ss_pred eeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHH
Confidence 456777889999999999999965 57778999775332 334456789999999999999999999999999999999
Q ss_pred EEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCC
Q 002278 692 DYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTA 771 (943)
Q Consensus 692 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~ 771 (943)
|||.+|+|.+++.. ....++.....+..|++.|++|||++ |||||||||.||+++.+|.+|.+|||.|..+...
T Consensus 1314 EyC~~GsLa~ll~~---gri~dE~vt~vyt~qll~gla~LH~~---gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~ 1387 (1509)
T KOG4645|consen 1314 EYCEGGSLASLLEH---GRIEDEMVTRVYTKQLLEGLAYLHEH---GIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNN 1387 (1509)
T ss_pred HHhccCcHHHHHHh---cchhhhhHHHHHHHHHHHHHHHHHhc---CceecCCCccceeeecCCcEEeecccceeEecCc
Confidence 99999999999962 33355555566888999999999999 9999999999999999999999999999887543
Q ss_pred C---CceeeeEecccceeCcccccc---CCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcc
Q 002278 772 M---PHASTFVLGTIGYIDPEYAHT---SRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPE 845 (943)
Q Consensus 772 ~---~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 845 (943)
. +..-....||+.|||||++.+ ++...++||||+|||+.||+||+.||...++-.+++........ |.
T Consensus 1388 ~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V~~gh~------Pq 1461 (1509)
T KOG4645|consen 1388 AQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYHVAAGHK------PQ 1461 (1509)
T ss_pred hhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhHHhccCC------CC
Confidence 2 122234569999999999976 35778999999999999999999999877665555554433221 11
Q ss_pred cccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 002278 846 VSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVL 884 (943)
Q Consensus 846 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L 884 (943)
++.. ...+-.+++..|+..||++|-++.|++++-
T Consensus 1462 ~P~~-----ls~~g~dFle~Cl~~dP~~Rw~~~qlle~~ 1495 (1509)
T KOG4645|consen 1462 IPER-----LSSEGRDFLEHCLEQDPKMRWTASQLLEHA 1495 (1509)
T ss_pred Cchh-----hhHhHHHHHHHHHhcCchhhhHHHHHHHhh
Confidence 2111 123445899999999999999999998874
No 309
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=9.2e-34 Score=309.08 Aligned_cols=263 Identities=20% Similarity=0.225 Sum_probs=200.1
Q ss_pred hccccceEEeeeceEEEEEEEec-CCceEEEEEecccC--cccHHHHHHHHHHHhcCC-CCCcceeeeEEecCCc-----
Q 002278 616 ENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQY--PHNLREFETELETIGSIR-HRNIVSLHGYALSPYG----- 686 (943)
Q Consensus 616 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~----- 686 (943)
++|+..+.||+|+||.||+|.+. +++.||+|++.... ......+.+|+++++.++ ||||+++++++...+.
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 36888999999999999999976 57899999875433 223457888999999995 6999999999987665
Q ss_pred ceEEEEEccCCChhhhccCCCC--CccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECC-CCceeecccc
Q 002278 687 NLLFYDYMVNGSLWDLLHGPSK--KVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDE-NFDAHLSDFG 763 (943)
Q Consensus 687 ~~lv~e~~~~g~L~~~l~~~~~--~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~-~~~~kl~DFG 763 (943)
.++||||+++ +|.+++..... ...+++..++.++.||+.||+|||+. +|+||||||+||+++. ++.+||+|||
T Consensus 81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~~~nil~~~~~~~~kl~dfg 156 (295)
T cd07837 81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKH---GVMHRDLKPQNLLVDKQKGLLKIADLG 156 (295)
T ss_pred EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEecCCCeEEEeecc
Confidence 7999999975 78888753221 34689999999999999999999999 9999999999999998 8899999999
Q ss_pred cccccCCCCCceeeeEecccceeCcccccc-CCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhcccccccccc
Q 002278 764 IARCIPTAMPHASTFVLGTIGYIDPEYAHT-SRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAV 842 (943)
Q Consensus 764 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 842 (943)
+++.+...... .....+++.|+|||++.+ ..++.++||||||+++|||++|..||.+.....................
T Consensus 157 ~~~~~~~~~~~-~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (295)
T cd07837 157 LGRAFSIPVKS-YTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQV 235 (295)
T ss_pred cceecCCCccc-cCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhh
Confidence 99865432221 122346889999998765 4578999999999999999999999987766655443322111111111
Q ss_pred Cccc------------ccC---ccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002278 843 DPEV------------SVT---CVDLSAVRKTFQLALLCTKRYPSERPTMQEVARV 883 (943)
Q Consensus 843 ~~~~------------~~~---~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~ 883 (943)
.+.. ... .........+.+++..|+.++|++||++.|++.+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~ 291 (295)
T cd07837 236 WPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTH 291 (295)
T ss_pred CcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 1000 000 0000123567889999999999999999999876
No 310
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=1.5e-33 Score=304.35 Aligned_cols=250 Identities=21% Similarity=0.349 Sum_probs=202.2
Q ss_pred ccccceEEeeeceEEEEEEEec-CCceEEEEEecccC-cccHHHHHHHHHHHhcCC---CCCcceeeeEEecCCcceEEE
Q 002278 617 NLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQY-PHNLREFETELETIGSIR---HRNIVSLHGYALSPYGNLLFY 691 (943)
Q Consensus 617 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~~lv~ 691 (943)
.|+..+.||+|+||.||+|.+. +++.||+|.+.... ....+++.+|+++++.++ |||++++++++......++||
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~ 81 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIM 81 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEE
Confidence 4677788999999999999974 67899999886442 344567889999999986 999999999999998999999
Q ss_pred EEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCC
Q 002278 692 DYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTA 771 (943)
Q Consensus 692 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~ 771 (943)
||+++++|.+++.. ..+++..+..++.|++.|++|||+. +|+||||+|+||++++++.++++|||++..+...
T Consensus 82 e~~~~~~L~~~~~~----~~l~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~ 154 (277)
T cd06917 82 EYAEGGSVRTLMKA----GPIAEKYISVIIREVLVALKYIHKV---GVIHRDIKAANILVTNTGNVKLCDFGVAALLNQN 154 (277)
T ss_pred ecCCCCcHHHHHHc----cCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHHEEEcCCCCEEEccCCceeecCCC
Confidence 99999999999852 3689999999999999999999999 9999999999999999999999999999877544
Q ss_pred CCceeeeEecccceeCcccccc-CCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccccCc
Q 002278 772 MPHASTFVLGTIGYIDPEYAHT-SRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTC 850 (943)
Q Consensus 772 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 850 (943)
... .....|+..|+|||.+.+ ..++.++|+|||||++|+|++|+.||............ .. ...+.+...
T Consensus 155 ~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~-~~------~~~~~~~~~- 225 (277)
T cd06917 155 SSK-RSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLI-PK------SKPPRLEDN- 225 (277)
T ss_pred ccc-cccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhcc-cc------CCCCCCCcc-
Confidence 322 223458999999998875 45789999999999999999999999865443222111 10 011112111
Q ss_pred cCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 002278 851 VDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLV 885 (943)
Q Consensus 851 ~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~ 885 (943)
.....+.+++..||+.||++||++.+++++-+
T Consensus 226 ---~~~~~~~~~i~~~l~~~p~~R~~~~~il~~~~ 257 (277)
T cd06917 226 ---GYSKLLREFVAACLDEEPKERLSAEELLKSKW 257 (277)
T ss_pred ---cCCHHHHHHHHHHcCCCcccCcCHHHHhhChH
Confidence 12346778999999999999999999988644
No 311
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=7.9e-34 Score=306.17 Aligned_cols=255 Identities=25% Similarity=0.376 Sum_probs=203.1
Q ss_pred HhhccccceEEeeeceEEEEEEEec-CCceEEEEEecccCcccHHHHHHHHHHHhcC-CCCCcceeeeEEecCC------
Q 002278 614 STENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQYPHNLREFETELETIGSI-RHRNIVSLHGYALSPY------ 685 (943)
Q Consensus 614 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~------ 685 (943)
++++|+..+.||+|++|.||+|..+ +++.+|+|.+.... ...+.+.+|+++++++ +||||+++++++....
T Consensus 4 ~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~ 82 (275)
T cd06608 4 PTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIE-DEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDD 82 (275)
T ss_pred chhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCc-hhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcce
Confidence 5688999999999999999999986 56789999876443 3456789999999999 6999999999997644
Q ss_pred cceEEEEEccCCChhhhccCCC-CCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeeccccc
Q 002278 686 GNLLFYDYMVNGSLWDLLHGPS-KKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGI 764 (943)
Q Consensus 686 ~~~lv~e~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGl 764 (943)
..++||||+++++|.+++.... ....+++..+..++.|++.||+|||+. +++||||+|+||++++++.++|+|||.
T Consensus 83 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~~l~p~ni~~~~~~~~~l~d~~~ 159 (275)
T cd06608 83 QLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHEN---KVIHRDIKGQNILLTKNAEVKLVDFGV 159 (275)
T ss_pred EEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEEccCCeEEECCCcc
Confidence 3799999999999999886422 235789999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCceeeeEecccceeCcccccc-----CCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccc
Q 002278 765 ARCIPTAMPHASTFVLGTIGYIDPEYAHT-----SRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVM 839 (943)
Q Consensus 765 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~ 839 (943)
+......... .....|+..|+|||++.. ..++.++|||||||++|+|++|+.||................
T Consensus 160 ~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~---- 234 (275)
T cd06608 160 SAQLDSTLGR-RNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIPRNP---- 234 (275)
T ss_pred ceecccchhh-hcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHHHhhccC----
Confidence 9765433222 223458899999998754 346789999999999999999999998654443333222111
Q ss_pred cccCcccccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002278 840 EAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARV 883 (943)
Q Consensus 840 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~ 883 (943)
.+.+.. .......+.+++.+|+..||++|||+.+++++
T Consensus 235 ---~~~~~~---~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~ 272 (275)
T cd06608 235 ---PPTLKS---PENWSKKFNDFISECLIKNYEQRPFMEELLEH 272 (275)
T ss_pred ---CCCCCc---hhhcCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 111110 11123567799999999999999999999876
No 312
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=1.1e-33 Score=316.36 Aligned_cols=261 Identities=21% Similarity=0.252 Sum_probs=202.1
Q ss_pred HhhccccceEEeeeceEEEEEEEec-CCceEEEEEecccC--cccHHHHHHHHHHHhcCCCCCcceeeeEEecCC-----
Q 002278 614 STENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQY--PHNLREFETELETIGSIRHRNIVSLHGYALSPY----- 685 (943)
Q Consensus 614 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----- 685 (943)
..++|+..+.||+|+||.||+|... +++.||+|++.... ......+.+|+.+++.++||||+++++++....
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 93 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF 93 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence 4578999999999999999999976 68899999986432 333456778999999999999999999986443
Q ss_pred -cceEEEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeeccccc
Q 002278 686 -GNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGI 764 (943)
Q Consensus 686 -~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGl 764 (943)
..++||||+. ++|.+.+.. .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 94 ~~~~lv~e~~~-~~l~~~~~~-----~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nil~~~~~~~kL~Dfg~ 164 (353)
T cd07850 94 QDVYLVMELMD-ANLCQVIQM-----DLDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGL 164 (353)
T ss_pred CcEEEEEeccC-CCHHHHHhh-----cCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEccCcc
Confidence 4689999995 588887752 288899999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhcccccccc----
Q 002278 765 ARCIPTAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVME---- 840 (943)
Q Consensus 765 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~---- 840 (943)
++....... .....|+..|+|||.+.+..++.++||||+||++|+|++|+.||...+....+.......+....
T Consensus 165 ~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (353)
T cd07850 165 ARTAGTSFM--MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMS 242 (353)
T ss_pred ceeCCCCCC--CCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHH
Confidence 987644322 22335789999999999999999999999999999999999999876554443332211111000
Q ss_pred ----------------------ccCcccccC----ccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 002278 841 ----------------------AVDPEVSVT----CVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLV 885 (943)
Q Consensus 841 ----------------------~~~~~~~~~----~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~ 885 (943)
...+..... .........+.+++.+|++.||++|||+.|++++-+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~~~ 313 (353)
T cd07850 243 RLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQHPY 313 (353)
T ss_pred HhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcChh
Confidence 000000000 000112345779999999999999999999998754
No 313
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=2e-34 Score=316.61 Aligned_cols=265 Identities=22% Similarity=0.293 Sum_probs=200.9
Q ss_pred cccceEEeeeceEEEEEEEec-CCceEEEEEecccC-cccHHHHHHHHHHHhcCCCCCcceeeeEEecCC------cceE
Q 002278 618 LSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQY-PHNLREFETELETIGSIRHRNIVSLHGYALSPY------GNLL 689 (943)
Q Consensus 618 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------~~~l 689 (943)
+...+.||+||||.||+|+.+ .|+.||||.+.... ....+...+|++++++++|||||+++++-.+.. ...+
T Consensus 15 W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vl 94 (732)
T KOG4250|consen 15 WEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVL 94 (732)
T ss_pred eeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceE
Confidence 445567999999999999965 69999999997654 445567789999999999999999998865443 5689
Q ss_pred EEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEEC--CCC--ceeecccccc
Q 002278 690 FYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILID--ENF--DAHLSDFGIA 765 (943)
Q Consensus 690 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~--~~~--~~kl~DFGla 765 (943)
|||||.||||+..+..+.+...+++.+.+.+..+++.||.|||++ +||||||||.||++- ++| ..||+|||.|
T Consensus 95 vmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn---~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~A 171 (732)
T KOG4250|consen 95 VMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLREN---GIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAA 171 (732)
T ss_pred EEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHc---CceeccCCCCcEEEeecCCCceEEeeeccccc
Confidence 999999999999999888888899999999999999999999999 999999999999994 334 4899999999
Q ss_pred cccCCCCCceeeeEecccceeCcccccc-CCCCCcchhhhHHHHHHHHHhCCCCCCCCcc----HHHHHHHhcccc-ccc
Q 002278 766 RCIPTAMPHASTFVLGTIGYIDPEYAHT-SRLNEKSDVYSFGIVLLEILTGKKAVDNESN----LHQLIMSKADDN-TVM 839 (943)
Q Consensus 766 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltG~~p~~~~~~----~~~~~~~~~~~~-~~~ 839 (943)
+.+++.. .....+||..|.|||+... +.|+..+|.|||||++|+.+||..||-.... .+....+..... ...
T Consensus 172 rel~d~s--~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~~tkkp~~v~ 249 (732)
T KOG4250|consen 172 RELDDNS--LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHIITKKPSGVA 249 (732)
T ss_pred ccCCCCC--eeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhhhhccCCCcee
Confidence 9887654 4455779999999999995 8899999999999999999999999963322 222222222211 111
Q ss_pred ccc----------CcccccCc-cCHHHHHHHHHHHHHccCCCCCCCC--CHHHHHHHHhhc
Q 002278 840 EAV----------DPEVSVTC-VDLSAVRKTFQLALLCTKRYPSERP--TMQEVARVLVSL 887 (943)
Q Consensus 840 ~~~----------~~~~~~~~-~~~~~~~~l~~l~~~cl~~dP~~RP--t~~el~~~L~~~ 887 (943)
... ...++..+ ........+...+..++..+|++|- .+.+..+.+..+
T Consensus 250 i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~~~~~~~~Fa~~~dI 310 (732)
T KOG4250|consen 250 IGAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRGHEGFDRFFAEVDDI 310 (732)
T ss_pred EeeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhCCCCcchHHHHHHHH
Confidence 100 01111111 1123334556677777888888887 555544444333
No 314
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=3.2e-33 Score=297.08 Aligned_cols=249 Identities=24% Similarity=0.376 Sum_probs=207.1
Q ss_pred cccceEEeeeceEEEEEEEec-CCceEEEEEecccCcccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEEccC
Q 002278 618 LSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVN 696 (943)
Q Consensus 618 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 696 (943)
|+..+.||+|++|.||+|..+ +++.+++|++..........+.+|+++++.++||+|+++++++..+...++++||+++
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~ 81 (253)
T cd05122 2 FEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCSG 81 (253)
T ss_pred ceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCCC
Confidence 677889999999999999986 6788999998766555667899999999999999999999999999999999999999
Q ss_pred CChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCCcee
Q 002278 697 GSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHAS 776 (943)
Q Consensus 697 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~~~~ 776 (943)
++|.+++... ...+++..+..++.|++.|++|||+. +++||||+|+||++++++.++|+|||.+........ .
T Consensus 82 ~~L~~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~--~ 154 (253)
T cd05122 82 GSLKDLLKST--NQTLTESQIAYVCKELLKGLEYLHSN---GIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA--R 154 (253)
T ss_pred CcHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHhhcC---CEecCCCCHHHEEEccCCeEEEeecccccccccccc--c
Confidence 9999998642 25689999999999999999999998 999999999999999999999999999987654432 2
Q ss_pred eeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccccCccCHHHH
Q 002278 777 TFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAV 856 (943)
Q Consensus 777 ~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 856 (943)
....|+..|+|||...+..++.++||||||+++|+|++|+.||............... .. +...... ...
T Consensus 155 ~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~--~~-----~~~~~~~---~~~ 224 (253)
T cd05122 155 NTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIATN--GP-----PGLRNPE---KWS 224 (253)
T ss_pred cceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhc--CC-----CCcCccc---ccC
Confidence 3456889999999999888999999999999999999999999876544333322221 11 1111000 012
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002278 857 RKTFQLALLCTKRYPSERPTMQEVARV 883 (943)
Q Consensus 857 ~~l~~l~~~cl~~dP~~RPt~~el~~~ 883 (943)
..+.+++..|++.||++|||+.+++++
T Consensus 225 ~~~~~~i~~~l~~~p~~R~t~~~~l~~ 251 (253)
T cd05122 225 DEFKDFLKKCLQKNPEKRPTAEQLLKH 251 (253)
T ss_pred HHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 567899999999999999999999876
No 315
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=1.4e-33 Score=305.89 Aligned_cols=262 Identities=23% Similarity=0.295 Sum_probs=202.2
Q ss_pred ccccceEEeeeceEEEEEEEec-CCceEEEEEecccC-cccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEEc
Q 002278 617 NLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQY-PHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYM 694 (943)
Q Consensus 617 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 694 (943)
+|+..+.||+|++|.||+|+.+ +++.||+|++.... ......+.+|+++++.++||||+++++++.+.+..++||||+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYM 80 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecC
Confidence 4788899999999999999986 57889999886543 233566778999999999999999999999999999999999
Q ss_pred cCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCCc
Q 002278 695 VNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPH 774 (943)
Q Consensus 695 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~~ 774 (943)
+ ++|.+++........+++..+..++.|++.||+|||+. +++||||||+||++++++.++++|||++.........
T Consensus 81 ~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~~ 156 (284)
T cd07836 81 D-KDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHEN---RVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVNT 156 (284)
T ss_pred C-ccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCccc
Confidence 7 48888876443345689999999999999999999998 9999999999999999999999999999765432211
Q ss_pred eeeeEecccceeCccccccC-CCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhcccccccc----------ccC
Q 002278 775 ASTFVLGTIGYIDPEYAHTS-RLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVME----------AVD 843 (943)
Q Consensus 775 ~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~----------~~~ 843 (943)
.....++..|+|||++.+. .++.++||||+||++|+|++|+.||.+................... ...
T Consensus 157 -~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (284)
T cd07836 157 -FSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYK 235 (284)
T ss_pred -cccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhc
Confidence 1223478899999988664 5789999999999999999999999876554433322211100000 000
Q ss_pred cccccCc------cCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002278 844 PEVSVTC------VDLSAVRKTFQLALLCTKRYPSERPTMQEVARV 883 (943)
Q Consensus 844 ~~~~~~~------~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~ 883 (943)
..++... ........+.+++..|++.||++||++.+++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~ 281 (284)
T cd07836 236 PTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQH 281 (284)
T ss_pred ccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 0000000 000123467789999999999999999999875
No 316
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=1.7e-33 Score=301.68 Aligned_cols=251 Identities=21% Similarity=0.313 Sum_probs=201.2
Q ss_pred ccccceEEeeeceEEEEEEEec-CCceEEEEEecccC--cccHHHHHHHHHHHhcCCCCCcceeeeEEecC--CcceEEE
Q 002278 617 NLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQY--PHNLREFETELETIGSIRHRNIVSLHGYALSP--YGNLLFY 691 (943)
Q Consensus 617 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lv~ 691 (943)
+|+..+.||.|+||.||+|... +++.||+|.+.... ....+.+..|+++++.++||||+++++++... ...+++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM 80 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence 4778889999999999999865 57889999886432 33445688899999999999999999988643 4568999
Q ss_pred EEccCCChhhhccCC-CCCccCCHHHHHHHHHHHHHHHHHhh-----hCCCCCeEecCCCCccEEECCCCceeecccccc
Q 002278 692 DYMVNGSLWDLLHGP-SKKVKLDWETRLKIAVGAAQGLAYLH-----HDCNPRIIHRDVKSSNILIDENFDAHLSDFGIA 765 (943)
Q Consensus 692 e~~~~g~L~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l~~LH-----~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla 765 (943)
||+++++|.+++... .....+++..++.++.|++.||+||| +. +++||||||+||+++.++.+|++|||++
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~---~i~h~dl~p~nili~~~~~~kl~d~g~~ 157 (265)
T cd08217 81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGN---TVLHRDLKPANIFLDANNNVKLGDFGLA 157 (265)
T ss_pred hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccC---cceecCCCHHHEEEecCCCEEEeccccc
Confidence 999999999998642 12457899999999999999999999 66 9999999999999999999999999999
Q ss_pred cccCCCCCceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcc
Q 002278 766 RCIPTAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPE 845 (943)
Q Consensus 766 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 845 (943)
.......... ....|++.|+|||.+.+..++.++|+||||+++|+|++|+.||..... ......... ... +.
T Consensus 158 ~~~~~~~~~~-~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-~~~~~~~~~-~~~-----~~ 229 (265)
T cd08217 158 KILGHDSSFA-KTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQ-LQLASKIKE-GKF-----RR 229 (265)
T ss_pred ccccCCcccc-cccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCH-HHHHHHHhc-CCC-----CC
Confidence 8775443212 234589999999999988899999999999999999999999986652 222222111 111 11
Q ss_pred cccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002278 846 VSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARV 883 (943)
Q Consensus 846 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~ 883 (943)
++. .....+.+++..|++.+|++||++.+++++
T Consensus 230 ~~~-----~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~ 262 (265)
T cd08217 230 IPY-----RYSSELNEVIKSMLNVDPDKRPSTEELLQL 262 (265)
T ss_pred Ccc-----ccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 111 122567899999999999999999999986
No 317
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=7.8e-34 Score=309.27 Aligned_cols=262 Identities=22% Similarity=0.249 Sum_probs=201.0
Q ss_pred hhccccceEEeeeceEEEEEEEec-CCceEEEEEecccC--cccHHHHHHHHHHHhcCCCCCcceeeeEEecC--CcceE
Q 002278 615 TENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQY--PHNLREFETELETIGSIRHRNIVSLHGYALSP--YGNLL 689 (943)
Q Consensus 615 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~l 689 (943)
.++|+..+.||+|+||.||+|.++ +++.+|+|++.... ......+.+|++++++++||||+++++++... ...++
T Consensus 4 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~l 83 (293)
T cd07843 4 VDEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYM 83 (293)
T ss_pred hhhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEE
Confidence 357888899999999999999986 57889999886443 22234567899999999999999999999877 78999
Q ss_pred EEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccC
Q 002278 690 FYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIP 769 (943)
Q Consensus 690 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~ 769 (943)
||||+. ++|.+++... ...+++..+..++.|++.||+|||+. +++||||||+||+++.++.++|+|||+++...
T Consensus 84 v~e~~~-~~L~~~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~ 157 (293)
T cd07843 84 VMEYVE-HDLKSLMETM--KQPFLQSEVKCLMLQLLSGVAHLHDN---WILHRDLKTSNLLLNNRGILKICDFGLAREYG 157 (293)
T ss_pred EehhcC-cCHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCcEEEeecCceeecc
Confidence 999997 5898888632 23689999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCceeeeEecccceeCccccccC-CCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhcccccccccc------
Q 002278 770 TAMPHASTFVLGTIGYIDPEYAHTS-RLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAV------ 842 (943)
Q Consensus 770 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~------ 842 (943)
..... .....+++.|+|||.+.+. .++.++|+||+|+++|||++|+.||................+......
T Consensus 158 ~~~~~-~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (293)
T cd07843 158 SPLKP-YTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSE 236 (293)
T ss_pred CCccc-cccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhc
Confidence 43222 2223478899999988764 468999999999999999999999987655443322211111000000
Q ss_pred -------------CcccccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002278 843 -------------DPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARV 883 (943)
Q Consensus 843 -------------~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~ 883 (943)
...+............+.+++..|++.+|++|||+.|++.+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~ 290 (293)
T cd07843 237 LPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKH 290 (293)
T ss_pred cchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcC
Confidence 00000000010013457789999999999999999999876
No 318
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=5.1e-34 Score=304.56 Aligned_cols=247 Identities=24% Similarity=0.291 Sum_probs=202.9
Q ss_pred ccccceEEeeeceEEEEEEEec-CCceEEEEEecccC---cccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEE
Q 002278 617 NLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQY---PHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYD 692 (943)
Q Consensus 617 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 692 (943)
+|+..+.||+|+||.||+|.+. .++.||+|.+.... ....+.+.+|++++++++||||+++++++.++...++|+|
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence 4788899999999999999976 58889999986543 2345678899999999999999999999999999999999
Q ss_pred EccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCC
Q 002278 693 YMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAM 772 (943)
Q Consensus 693 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~ 772 (943)
|+.+++|.+++.. ...+++..+..++.|+++||+|||+. +++|+||+|+||++++++.++|+|||.+.......
T Consensus 81 ~~~~~~L~~~l~~---~~~l~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~ 154 (258)
T cd05578 81 LLLGGDLRYHLSQ---KVKFSEEQVKFWICEIVLALEYLHSK---GIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT 154 (258)
T ss_pred CCCCCCHHHHHHh---cCCcCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEEcCCCCEEEeecccccccCCCc
Confidence 9999999999863 35789999999999999999999998 99999999999999999999999999998664432
Q ss_pred CceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCcc--HHHHHHHhccccccccccCcccccCc
Q 002278 773 PHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESN--LHQLIMSKADDNTVMEAVDPEVSVTC 850 (943)
Q Consensus 773 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 850 (943)
......|+..|+|||.+.+..++.++|+||+|+++|+|++|+.||..... .......... ......+.
T Consensus 155 --~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~----- 224 (258)
T cd05578 155 --LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQET---ADVLYPAT----- 224 (258)
T ss_pred --cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHHhcc---ccccCccc-----
Confidence 12234588899999999988899999999999999999999999986553 2222222111 11111111
Q ss_pred cCHHHHHHHHHHHHHccCCCCCCCCCH--HHHHHH
Q 002278 851 VDLSAVRKTFQLALLCTKRYPSERPTM--QEVARV 883 (943)
Q Consensus 851 ~~~~~~~~l~~l~~~cl~~dP~~RPt~--~el~~~ 883 (943)
....+.+++.+||+.||.+||++ +|++++
T Consensus 225 ----~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~~ 255 (258)
T cd05578 225 ----WSTEAIDAINKLLERDPQKRLGDNLKDLKNH 255 (258)
T ss_pred ----CcHHHHHHHHHHccCChhHcCCccHHHHhcC
Confidence 12567789999999999999999 776654
No 319
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=1.5e-33 Score=305.35 Aligned_cols=260 Identities=23% Similarity=0.272 Sum_probs=200.1
Q ss_pred cccceEEeeeceEEEEEEEec-CCceEEEEEecccC--cccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEEc
Q 002278 618 LSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQY--PHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYM 694 (943)
Q Consensus 618 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 694 (943)
|+..+.||.|++|.||+|.++ ++..||+|++.... ....+.+.+|+++++.++|||++++++++.+++..+++|||+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~ 80 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL 80 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence 567789999999999999975 68899999886443 223457888999999999999999999999999999999999
Q ss_pred cCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCCc
Q 002278 695 VNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPH 774 (943)
Q Consensus 695 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~~ 774 (943)
+ ++|.+++.... ...+++..+..++.|+++||+|||+. +++||||+|+||+++.++.++|+|||+++........
T Consensus 81 ~-~~l~~~~~~~~-~~~~~~~~~~~~~~~i~~~L~~lH~~---~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~ 155 (283)
T cd07835 81 D-LDLKKYMDSSP-LTGLDPPLIKSYLYQLLQGIAYCHSH---RVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVRT 155 (283)
T ss_pred C-cCHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCcEEEeecccccccCCCccc
Confidence 4 68999886432 23689999999999999999999998 9999999999999999999999999999765433221
Q ss_pred eeeeEecccceeCccccccC-CCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCc------c--
Q 002278 775 ASTFVLGTIGYIDPEYAHTS-RLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDP------E-- 845 (943)
Q Consensus 775 ~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~------~-- 845 (943)
. ....++..|+|||++.+. .++.++||||||+++|+|++|+.||.......................++ .
T Consensus 156 ~-~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (283)
T cd07835 156 Y-THEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYK 234 (283)
T ss_pred c-CccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhh
Confidence 1 222468899999987664 57899999999999999999999998766544433322211111110000 0
Q ss_pred --cc---cCc---cCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002278 846 --VS---VTC---VDLSAVRKTFQLALLCTKRYPSERPTMQEVARV 883 (943)
Q Consensus 846 --~~---~~~---~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~ 883 (943)
+. ... ........+.+++.+|++.||++|||+.|++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 280 (283)
T cd07835 235 PTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQH 280 (283)
T ss_pred hhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 00 000 000112467789999999999999999999876
No 320
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=1.7e-33 Score=305.43 Aligned_cols=255 Identities=26% Similarity=0.369 Sum_probs=208.9
Q ss_pred HhhccccceEEeeeceEEEEEEEec-CCceEEEEEecccCcccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEE
Q 002278 614 STENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYD 692 (943)
Q Consensus 614 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 692 (943)
.++.|+....||+|++|.||+|.++ ++..||+|++..... ..+.+.+|+++++.++|+||+++++++......++++|
T Consensus 17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 95 (286)
T cd06614 17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVME 95 (286)
T ss_pred ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEe
Confidence 5667888889999999999999987 678899999865443 46778899999999999999999999999999999999
Q ss_pred EccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCC
Q 002278 693 YMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAM 772 (943)
Q Consensus 693 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~ 772 (943)
|+++++|.+++.... ..+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.++|+|||++.......
T Consensus 96 ~~~~~~L~~~l~~~~--~~l~~~~~~~i~~~i~~~L~~lH~~---gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~ 170 (286)
T cd06614 96 YMDGGSLTDIITQNF--VRMNEPQIAYVCREVLQGLEYLHSQ---NVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEK 170 (286)
T ss_pred ccCCCcHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCChhhEEEcCCCCEEECccchhhhhccch
Confidence 999999999997422 3799999999999999999999998 99999999999999999999999999987654332
Q ss_pred CceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccccCccC
Q 002278 773 PHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVD 852 (943)
Q Consensus 773 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 852 (943)
. ......++..|+|||++.+..++.++|||||||++|+|++|+.||.................. ....+
T Consensus 171 ~-~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~-------- 239 (286)
T cd06614 171 S-KRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTKGIP--PLKNP-------- 239 (286)
T ss_pred h-hhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCC--CCcch--------
Confidence 2 222335788999999998888999999999999999999999999876554433332211110 00000
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 002278 853 LSAVRKTFQLALLCTKRYPSERPTMQEVARVLV 885 (943)
Q Consensus 853 ~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~ 885 (943)
......+.+++.+|++.+|.+||++.+++++.+
T Consensus 240 ~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~ 272 (286)
T cd06614 240 EKWSPEFKDFLNKCLVKDPEKRPSAEELLQHPF 272 (286)
T ss_pred hhCCHHHHHHHHHHhccChhhCcCHHHHhhChH
Confidence 012246778999999999999999999998654
No 321
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=2e-33 Score=304.40 Aligned_cols=254 Identities=26% Similarity=0.356 Sum_probs=196.2
Q ss_pred hccccceEEeeeceEEEEEEEec-CCceEEEEEecccC-cccHHHHHHHHHH-HhcCCCCCcceeeeEEecCCcceEEEE
Q 002278 616 ENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQY-PHNLREFETELET-IGSIRHRNIVSLHGYALSPYGNLLFYD 692 (943)
Q Consensus 616 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~~lv~e 692 (943)
++|+..+.||+|+||.||+|.++ +++.||+|++.... .....++..|+.. ++..+||||+++++++..+...+++||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e 80 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICME 80 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhh
Confidence 36788899999999999999976 58899999886543 2234455566665 666789999999999999999999999
Q ss_pred EccCCChhhhccCC-CCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCC
Q 002278 693 YMVNGSLWDLLHGP-SKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTA 771 (943)
Q Consensus 693 ~~~~g~L~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~ 771 (943)
|++ |+|.+++... .....+++..++.++.|++.|++|||+++ +++||||||+||+++.++.+||+|||+++.....
T Consensus 81 ~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~ 157 (283)
T cd06617 81 VMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKL--SVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDS 157 (283)
T ss_pred hhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeecccccccccc
Confidence 996 6887776532 23356899999999999999999999843 8999999999999999999999999999865432
Q ss_pred CCceeeeEecccceeCcccccc----CCCCCcchhhhHHHHHHHHHhCCCCCCCCcc-HHHHHHHhccccccccccCccc
Q 002278 772 MPHASTFVLGTIGYIDPEYAHT----SRLNEKSDVYSFGIVLLEILTGKKAVDNESN-LHQLIMSKADDNTVMEAVDPEV 846 (943)
Q Consensus 772 ~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~DvwSlGvil~elltG~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 846 (943)
. ......|+..|+|||.+.+ ..++.++|+||+||++|||++|+.||..... .......... ..+.+
T Consensus 158 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~-------~~~~~ 228 (283)
T cd06617 158 V--AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVEE-------PSPQL 228 (283)
T ss_pred c--ccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHHhc-------CCCCC
Confidence 1 1222458899999998865 4568899999999999999999999975332 2222221111 11111
Q ss_pred ccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 002278 847 SVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLV 885 (943)
Q Consensus 847 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~ 885 (943)
... .....+.+++..|+..+|++||++.+++++-+
T Consensus 229 ~~~----~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~ 263 (283)
T cd06617 229 PAE----KFSPEFQDFVNKCLKKNYKERPNYPELLQHPF 263 (283)
T ss_pred Ccc----ccCHHHHHHHHHHccCChhhCcCHHHHhcCch
Confidence 111 11246778999999999999999999998643
No 322
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=2.1e-33 Score=304.95 Aligned_cols=261 Identities=26% Similarity=0.290 Sum_probs=202.4
Q ss_pred cccceEEeeeceEEEEEEEec-CCceEEEEEecccC--cccHHHHHHHHHHHhcCCCCCcceeeeEEecC--CcceEEEE
Q 002278 618 LSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQY--PHNLREFETELETIGSIRHRNIVSLHGYALSP--YGNLLFYD 692 (943)
Q Consensus 618 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lv~e 692 (943)
|+..+.||+|+||.||+|... .++.+|+|++.... ......+.+|+++++.++|||++++++++... +..++|||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 80 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE 80 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence 567789999999999999977 47889999997653 34456788999999999999999999999888 78999999
Q ss_pred EccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCC
Q 002278 693 YMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAM 772 (943)
Q Consensus 693 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~ 772 (943)
|++ ++|.+++... ...+++..+..++.|++.|++|||+. +++|+||||+||++++++.+||+|||++.......
T Consensus 81 ~~~-~~l~~~~~~~--~~~~~~~~~~~i~~~i~~al~~LH~~---~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~ 154 (287)
T cd07840 81 YMD-HDLTGLLDSP--EVKFTESQIKCYMKQLLEGLQYLHSN---GILHRDIKGSNILINNDGVLKLADFGLARPYTKRN 154 (287)
T ss_pred ccc-ccHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEEcCCCCEEEccccceeeccCCC
Confidence 997 4888887632 24689999999999999999999998 99999999999999999999999999998775543
Q ss_pred CceeeeEecccceeCcccccc-CCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCccccc---
Q 002278 773 PHASTFVLGTIGYIDPEYAHT-SRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSV--- 848 (943)
Q Consensus 773 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 848 (943)
........++..|+|||.+.+ ..++.++||||||+++|||+||+.||.......................++....
T Consensus 155 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (287)
T cd07840 155 SADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPW 234 (287)
T ss_pred cccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccchh
Confidence 222333457889999997765 4578999999999999999999999987665433332221111111110110000
Q ss_pred ---------------CccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 002278 849 ---------------TCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVL 884 (943)
Q Consensus 849 ---------------~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L 884 (943)
..........+.++++.|+..+|++||++.+++++-
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~~ 285 (287)
T cd07840 235 FENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQHE 285 (287)
T ss_pred hhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhCc
Confidence 000000145778999999999999999999998763
No 323
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3.6e-34 Score=310.75 Aligned_cols=256 Identities=21% Similarity=0.263 Sum_probs=210.0
Q ss_pred HHhhccccceEEeeeceEEEEEEEec-CCceEEEEEecccC--cccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceE
Q 002278 613 RSTENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQY--PHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLL 689 (943)
Q Consensus 613 ~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 689 (943)
.....|.+...||+|.|+.|..|++. .+..||+|.+.+.. ....+.+.+|+++|..++|||||+++.+.......|+
T Consensus 53 ~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lyl 132 (596)
T KOG0586|consen 53 NSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYL 132 (596)
T ss_pred ccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEE
Confidence 35678889999999999999999976 58999999887654 2334568899999999999999999999999999999
Q ss_pred EEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccC
Q 002278 690 FYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIP 769 (943)
Q Consensus 690 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~ 769 (943)
||||+.+|.+++++. ..++..+..+..++.|+..|++|+|++ .|||||||++||+++.+..+||+|||++.++.
T Consensus 133 V~eya~~ge~~~yl~---~~gr~~e~~ar~~F~q~vsaveYcH~k---~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~ 206 (596)
T KOG0586|consen 133 VMEYASGGELFDYLV---KHGRMKEKEARAKFRQIVSAVEYCHSK---NIVHRDLKAENILLDENMNIKIADFGFSTFFD 206 (596)
T ss_pred EEEeccCchhHHHHH---hcccchhhhhhhhhHHHHHHHHHHhhc---ceeccccchhhcccccccceeeeccccceeec
Confidence 999999999999997 455566788899999999999999999 99999999999999999999999999999887
Q ss_pred CCCCceeeeEecccceeCccccccCCC-CCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCccccc
Q 002278 770 TAMPHASTFVLGTIGYIDPEYAHTSRL-NEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSV 848 (943)
Q Consensus 770 ~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 848 (943)
.. ......+|++.|.|||++.+..| ++++|+||+|+++|.|+.|..||++..-..-.-+.......+ +-.+.
T Consensus 207 ~~--~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~gk~rI----p~~ms- 279 (596)
T KOG0586|consen 207 YG--LMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLRGKYRI----PFYMS- 279 (596)
T ss_pred cc--ccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccchheeeeecc----cceee-
Confidence 44 33345679999999999999776 489999999999999999999998654221111111111111 11111
Q ss_pred CccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcCC
Q 002278 849 TCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLVSLLP 889 (943)
Q Consensus 849 ~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~~~~ 889 (943)
..+.+++++++-.+|.+|++.+++.++-|.-..
T Consensus 280 --------~dce~lLrk~lvl~Pskr~~~dqim~~~W~n~~ 312 (596)
T KOG0586|consen 280 --------CDCEDLLRKFLVLNPSKRGPCDQIMKDRWRNDL 312 (596)
T ss_pred --------chhHHHHHHhhccCccccCCHHHhhhhcccchh
Confidence 244578999999999999999999998775443
No 324
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=3.4e-33 Score=303.13 Aligned_cols=259 Identities=26% Similarity=0.332 Sum_probs=201.2
Q ss_pred hccccceEEeeeceEEEEEEEec-CCceEEEEEecccCc-ccHHHHHHHHHHHhcCCCCCcceeeeEEecC--CcceEEE
Q 002278 616 ENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQYP-HNLREFETELETIGSIRHRNIVSLHGYALSP--YGNLLFY 691 (943)
Q Consensus 616 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lv~ 691 (943)
++|...+.||.|++|.||+|.+. .++.+|+|.+..... ....++.+|+++++.++||||+++++++.+. ...++||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 80 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAM 80 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEE
Confidence 35778899999999999999986 578889998864432 3456788999999999999999999998654 3579999
Q ss_pred EEccCCChhhhccCCC-CCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCC
Q 002278 692 DYMVNGSLWDLLHGPS-KKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPT 770 (943)
Q Consensus 692 e~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~ 770 (943)
||+++++|.+++.... ....+++..+..++.|++.||+|||+. +++|+||+|+||++++++.++|+|||++.....
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~ 157 (287)
T cd06621 81 EYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSR---KIIHRDIKPSNILLTRKGQVKLCDFGVSGELVN 157 (287)
T ss_pred EecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecCCeEEEeeccccccccc
Confidence 9999999998875321 245688999999999999999999999 999999999999999999999999999875533
Q ss_pred CCCceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCcc----HHHHHHHhccccccccccCccc
Q 002278 771 AMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESN----LHQLIMSKADDNTVMEAVDPEV 846 (943)
Q Consensus 771 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 846 (943)
... ....++..|+|||...+..++.++||||+||++|+|++|+.||..... ............. .......
T Consensus 158 ~~~---~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 232 (287)
T cd06621 158 SLA---GTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPN--PELKDEP 232 (287)
T ss_pred ccc---ccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCc--hhhccCC
Confidence 221 123478899999999988999999999999999999999999985521 1111111111010 0000000
Q ss_pred ccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 002278 847 SVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLV 885 (943)
Q Consensus 847 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~ 885 (943)
. ........+.+++.+||+.+|++|||+.|++++-+
T Consensus 233 ~---~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~~~ 268 (287)
T cd06621 233 G---NGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPW 268 (287)
T ss_pred C---CCCchHHHHHHHHHHHcCCCcccCCCHHHHHhCcc
Confidence 0 00112356789999999999999999999999755
No 325
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=2.6e-33 Score=298.89 Aligned_cols=250 Identities=24% Similarity=0.350 Sum_probs=201.9
Q ss_pred ccccceEEeeeceEEEEEEEec-CCceEEEEEecccC--cccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEE
Q 002278 617 NLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQY--PHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDY 693 (943)
Q Consensus 617 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 693 (943)
+|+..+.||+|+||.||+|..+ ++..||+|.+.... ....+.+.+|+++++.++|+||+++++.+..+...++++||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 80 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY 80 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence 4778889999999999999976 47889999885432 23456788999999999999999999999999999999999
Q ss_pred ccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCC-ceeecccccccccCCCC
Q 002278 694 MVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENF-DAHLSDFGIARCIPTAM 772 (943)
Q Consensus 694 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~-~~kl~DFGla~~~~~~~ 772 (943)
+++++|.+++... ....+++..+..++.|+++|++|||+. +++|+||||+||++++++ .+|++|||.+.......
T Consensus 81 ~~~~~L~~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~ 156 (257)
T cd08225 81 CDGGDLMKRINRQ-RGVLFSEDQILSWFVQISLGLKHIHDR---KILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSM 156 (257)
T ss_pred CCCCcHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEcCCCCeEEecccccchhccCCc
Confidence 9999999998642 223579999999999999999999999 999999999999999875 47999999998765432
Q ss_pred CceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccccCccC
Q 002278 773 PHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVD 852 (943)
Q Consensus 773 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 852 (943)
.. .....|++.|+|||+..+..++.++|+||||+++|||++|+.||............. ... . ....+.+
T Consensus 157 ~~-~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~-~~~-~-~~~~~~~------ 226 (257)
T cd08225 157 EL-AYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKIC-QGY-F-APISPNF------ 226 (257)
T ss_pred cc-ccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHh-ccc-C-CCCCCCC------
Confidence 22 223458899999999988889999999999999999999999997654333222211 111 1 1111111
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002278 853 LSAVRKTFQLALLCTKRYPSERPTMQEVARV 883 (943)
Q Consensus 853 ~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~ 883 (943)
...+.+++.+|+..+|++|||+.+++++
T Consensus 227 ---~~~~~~~i~~~l~~~p~~Rpt~~~ll~~ 254 (257)
T cd08225 227 ---SRDLRSLISQLFKVSPRDRPSITSILKR 254 (257)
T ss_pred ---CHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 2467789999999999999999999886
No 326
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=2.2e-33 Score=304.79 Aligned_cols=246 Identities=22% Similarity=0.353 Sum_probs=200.1
Q ss_pred eEEeeeceEEEEEEEec-CCceEEEEEecccCcccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEEccCCChh
Q 002278 622 YIVGYGASSTVYKCALK-NSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLW 700 (943)
Q Consensus 622 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~ 700 (943)
..||+|+||.||+|..+ +++.||+|++..........+.+|+.+++.++|+||+++++++...+..+++|||+++++|.
T Consensus 26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 105 (292)
T cd06657 26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT 105 (292)
T ss_pred HHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcHH
Confidence 56999999999999875 67899999986554455667889999999999999999999999999999999999999999
Q ss_pred hhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCCceeeeEe
Q 002278 701 DLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVL 780 (943)
Q Consensus 701 ~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~~~ 780 (943)
+++. ...+++..+..++.|++.|++|||+. +++||||+|+||++++++.++|+|||++........ ......
T Consensus 106 ~~~~----~~~~~~~~~~~~~~ql~~~l~~lH~~---givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~-~~~~~~ 177 (292)
T cd06657 106 DIVT----HTRMNEEQIAAVCLAVLKALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP-RRKSLV 177 (292)
T ss_pred HHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEcccccceecccccc-cccccc
Confidence 9874 23578999999999999999999999 999999999999999999999999999876643322 223345
Q ss_pred cccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccccCccCHHHHHHHH
Q 002278 781 GTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAVRKTF 860 (943)
Q Consensus 781 gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 860 (943)
|++.|+|||...+..++.++|+||+||++|||++|+.||............... .++.+... ......+.
T Consensus 178 ~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~~-------~~~~~~~~---~~~~~~l~ 247 (292)
T cd06657 178 GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDN-------LPPKLKNL---HKVSPSLK 247 (292)
T ss_pred cCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhh-------CCcccCCc---ccCCHHHH
Confidence 889999999998888999999999999999999999999865544332221111 11111100 01124567
Q ss_pred HHHHHccCCCCCCCCCHHHHHHHHh
Q 002278 861 QLALLCTKRYPSERPTMQEVARVLV 885 (943)
Q Consensus 861 ~l~~~cl~~dP~~RPt~~el~~~L~ 885 (943)
+++.+|++.+|.+||++.+++++-+
T Consensus 248 ~li~~~l~~~P~~R~~~~~ll~~~~ 272 (292)
T cd06657 248 GFLDRLLVRDPAQRATAAELLKHPF 272 (292)
T ss_pred HHHHHHHhCCcccCcCHHHHhcChH
Confidence 8999999999999999999998744
No 327
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=1.3e-33 Score=313.29 Aligned_cols=266 Identities=23% Similarity=0.320 Sum_probs=203.4
Q ss_pred hhccccceEEeeeceEEEEEEEec-CCceEEEEEecccC--cccHHHHHHHHHHHhcCCCCCcceeeeEEecC----Ccc
Q 002278 615 TENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQY--PHNLREFETELETIGSIRHRNIVSLHGYALSP----YGN 687 (943)
Q Consensus 615 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~----~~~ 687 (943)
.++|+..+.||+|+||.||+|..+ +++.||+|++.... ......+.+|+.+++.++||||+++++++... ...
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDV 83 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceE
Confidence 368889999999999999999976 58899999986542 23456778899999999999999999987643 457
Q ss_pred eEEEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccc
Q 002278 688 LLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARC 767 (943)
Q Consensus 688 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~ 767 (943)
++||||+. |+|.+++. ....+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++.
T Consensus 84 ~lv~e~~~-~~l~~~~~---~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~ 156 (334)
T cd07855 84 YVVMDLME-SDLHHIIH---SDQPLTEEHIRYFLYQLLRGLKYIHSA---NVIHRDLKPSNLLVNEDCELRIGDFGMARG 156 (334)
T ss_pred EEEEehhh-hhHHHHhc---cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEeccccccee
Confidence 89999995 68988886 344589999999999999999999998 999999999999999999999999999976
Q ss_pred cCCCCCc---eeeeEecccceeCcccccc-CCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhcccccccccc-
Q 002278 768 IPTAMPH---ASTFVLGTIGYIDPEYAHT-SRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAV- 842 (943)
Q Consensus 768 ~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~- 842 (943)
....... ......|+..|+|||.+.+ ..++.++|||||||++|||++|+.||.+..............+......
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~ 236 (334)
T cd07855 157 LSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVL 236 (334)
T ss_pred ecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhh
Confidence 5432211 1123468899999998765 4688999999999999999999999987655443322221111110000
Q ss_pred ---------------CcccccCc--cCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhc
Q 002278 843 ---------------DPEVSVTC--VDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLVSL 887 (943)
Q Consensus 843 ---------------~~~~~~~~--~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~~ 887 (943)
........ ........+.++++.|++.+|++||++.+++.+.+-.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~~~ 298 (334)
T cd07855 237 NRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHPFLA 298 (334)
T ss_pred hhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhChhhh
Confidence 00000000 0001235678999999999999999999999986643
No 328
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-34 Score=284.33 Aligned_cols=261 Identities=21% Similarity=0.319 Sum_probs=204.4
Q ss_pred cCHHHHHHHhhccccceEEeeeceEEEEEEE-ecCCceEEEEEecccCcccHHHHHHHHHHHhcCC-CCCcceeeeEEec
Q 002278 606 HTFDDIMRSTENLSEKYIVGYGASSTVYKCA-LKNSRPIAVKKLYNQYPHNLREFETELETIGSIR-HRNIVSLHGYALS 683 (943)
Q Consensus 606 ~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~ 683 (943)
.+|+|...-++. .||+|+||.|-.+. ..++..||||++.+.......++.+|++++.+.+ |+||+.++++|++
T Consensus 73 g~F~d~YkLt~e-----~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEd 147 (463)
T KOG0607|consen 73 GKFEDMYKLTSE-----LLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFED 147 (463)
T ss_pred chHHHHHHhHHH-----HhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcc
Confidence 356777666664 59999999999988 5689999999998887778889999999999996 9999999999999
Q ss_pred CCcceEEEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCC---ceeec
Q 002278 684 PYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENF---DAHLS 760 (943)
Q Consensus 684 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~---~~kl~ 760 (943)
++..|+|||-|.||+|..+++ ....+.+.++.+++.+|+.||.|||.+ ||+|||+||+|||..+.. -|||+
T Consensus 148 d~~FYLVfEKm~GGplLshI~---~~~~F~E~EAs~vvkdia~aLdFlH~k---gIAHRDlKPENiLC~~pn~vsPvKiC 221 (463)
T KOG0607|consen 148 DTRFYLVFEKMRGGPLLSHIQ---KRKHFNEREASRVVKDIASALDFLHTK---GIAHRDLKPENILCESPNKVSPVKIC 221 (463)
T ss_pred cceEEEEEecccCchHHHHHH---HhhhccHHHHHHHHHHHHHHHHHHhhc---CcccccCCccceeecCCCCcCceeee
Confidence 999999999999999999997 456799999999999999999999999 999999999999997544 38999
Q ss_pred ccccccccCC--C----CCceeeeEecccceeCccccc-----cCCCCCcchhhhHHHHHHHHHhCCCCCCCCcc-----
Q 002278 761 DFGIARCIPT--A----MPHASTFVLGTIGYIDPEYAH-----TSRLNEKSDVYSFGIVLLEILTGKKAVDNESN----- 824 (943)
Q Consensus 761 DFGla~~~~~--~----~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlGvil~elltG~~p~~~~~~----- 824 (943)
||.++.-... . ....-...+|+..|||||+.. ...|+.+.|.||+|||+|-|++|.+||.+.-.
T Consensus 222 DfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGW 301 (463)
T KOG0607|consen 222 DFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGW 301 (463)
T ss_pred ccccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCc
Confidence 9988754311 1 111122346899999999753 24589999999999999999999999963211
Q ss_pred ---------HHHHHH-HhccccccccccCcccccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhh
Q 002278 825 ---------LHQLIM-SKADDNTVMEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLVS 886 (943)
Q Consensus 825 ---------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~ 886 (943)
...+.. +......+++.-|..++ .+--+++...+..|+.+|-++.+++.|-+-
T Consensus 302 drGe~Cr~CQ~~LFesIQEGkYeFPdkdWahIS---------~eakdlisnLlvrda~~rlsa~~vlnhPw~ 364 (463)
T KOG0607|consen 302 DRGEVCRVCQNKLFESIQEGKYEFPDKDWAHIS---------SEAKDLISNLLVRDAKQRLSAAQVLNHPWV 364 (463)
T ss_pred cCCCccHHHHHHHHHHHhccCCcCChhhhHHhh---------HHHHHHHHHHHhccHHhhhhhhhccCCccc
Confidence 111222 22222233333222222 233467888888999999999999986653
No 329
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=1.6e-33 Score=312.73 Aligned_cols=262 Identities=24% Similarity=0.306 Sum_probs=198.1
Q ss_pred hhccccceEEeeeceEEEEEEEec-CCceEEEEEecccC-cccHHHHHHHHHHHhcCCCCCcceeeeEEecCC-----cc
Q 002278 615 TENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQY-PHNLREFETELETIGSIRHRNIVSLHGYALSPY-----GN 687 (943)
Q Consensus 615 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~~ 687 (943)
.++|+..+.||+|+||.||+|.+. +++.||+|++.... ......+.+|++++++++||||+++++++.... ..
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 83 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV 83 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence 468999999999999999999875 57899999986432 234456788999999999999999999876543 46
Q ss_pred eEEEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccc
Q 002278 688 LLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARC 767 (943)
Q Consensus 688 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~ 767 (943)
++++||+. +++.+++. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 84 ~lv~e~~~-~~l~~~~~----~~~l~~~~~~~i~~ql~~aL~~LH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~~~ 155 (336)
T cd07849 84 YIVQELME-TDLYKLIK----TQHLSNDHIQYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTNCDLKICDFGLARI 155 (336)
T ss_pred EEEehhcc-cCHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEECcccceee
Confidence 89999996 58887774 34689999999999999999999999 999999999999999999999999999986
Q ss_pred cCCCCCc--eeeeEecccceeCcccccc-CCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccc-cccc--
Q 002278 768 IPTAMPH--ASTFVLGTIGYIDPEYAHT-SRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNT-VMEA-- 841 (943)
Q Consensus 768 ~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~-~~~~-- 841 (943)
....... ......|+..|+|||.+.+ ..++.++||||+||++|+|++|+.||.+......+.......+. ..+.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (336)
T cd07849 156 ADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLN 235 (336)
T ss_pred ccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHH
Confidence 5432211 1123458899999998754 56889999999999999999999999765543332221110000 0000
Q ss_pred -------------c--CcccccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 002278 842 -------------V--DPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVL 884 (943)
Q Consensus 842 -------------~--~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L 884 (943)
. .+..............+.+++.+||+.+|++|||+.+++++-
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp 293 (336)
T cd07849 236 CIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHP 293 (336)
T ss_pred HhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCc
Confidence 0 000000000001134678999999999999999999999983
No 330
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=3.7e-33 Score=305.92 Aligned_cols=250 Identities=27% Similarity=0.387 Sum_probs=201.0
Q ss_pred hhccccceEEeeeceEEEEEEEec-CCceEEEEEecccCc---ccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEE
Q 002278 615 TENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQYP---HNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLF 690 (943)
Q Consensus 615 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 690 (943)
.+.|...+.||+|+||+||+|... +++.||+|++..... ...+.+.+|+++++.++||||+++++++.+++..++|
T Consensus 14 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv 93 (307)
T cd06607 14 EKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLV 93 (307)
T ss_pred chhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEE
Confidence 356888899999999999999976 578999998854322 2345688999999999999999999999999999999
Q ss_pred EEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCC
Q 002278 691 YDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPT 770 (943)
Q Consensus 691 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~ 770 (943)
|||++ |++.+++.. ....+++..+..++.|++.||.|||+. +|+||||+|+||++++++.++|+|||++.....
T Consensus 94 ~e~~~-g~l~~~~~~--~~~~l~~~~~~~~~~ql~~~L~~LH~~---~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~ 167 (307)
T cd06607 94 MEYCL-GSASDILEV--HKKPLQEVEIAAICHGALQGLAYLHSH---ERIHRDIKAGNILLTEPGTVKLADFGSASLVSP 167 (307)
T ss_pred HHhhC-CCHHHHHHH--cccCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEECCCCCEEEeecCcceecCC
Confidence 99996 577776642 234689999999999999999999998 999999999999999999999999999976543
Q ss_pred CCCceeeeEecccceeCccccc---cCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccc
Q 002278 771 AMPHASTFVLGTIGYIDPEYAH---TSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVS 847 (943)
Q Consensus 771 ~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 847 (943)
. ....|+..|+|||++. ...++.++||||||+++|||+||+.||.+............... +.+.
T Consensus 168 ~-----~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~-------~~~~ 235 (307)
T cd06607 168 A-----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDS-------PTLS 235 (307)
T ss_pred C-----CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHHhcCCC-------CCCC
Confidence 2 1235788999999874 35688999999999999999999999987655443332221111 1111
Q ss_pred cCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhh
Q 002278 848 VTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLVS 886 (943)
Q Consensus 848 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~ 886 (943)
.......+.+++.+||..+|++||++.+++.+.+-
T Consensus 236 ----~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 270 (307)
T cd06607 236 ----SNDWSDYFRNFVDSCLQKIPQDRPSSEELLKHRFV 270 (307)
T ss_pred ----chhhCHHHHHHHHHHhcCChhhCcCHHHHhcChhh
Confidence 11123567899999999999999999999988653
No 331
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=3.5e-33 Score=301.35 Aligned_cols=247 Identities=21% Similarity=0.240 Sum_probs=194.0
Q ss_pred EeeeceEEEEEEEec-CCceEEEEEecccC---cccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEEccCCCh
Q 002278 624 VGYGASSTVYKCALK-NSRPIAVKKLYNQY---PHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSL 699 (943)
Q Consensus 624 lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 699 (943)
||+|+||+||+|..+ +++.||+|.+.... ......+.+|+++++.++||||+++++++...+..++||||+++++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 689999999999865 57899999886432 22344567899999999999999999999999999999999999999
Q ss_pred hhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCCceeeeE
Q 002278 700 WDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFV 779 (943)
Q Consensus 700 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~~ 779 (943)
.+++.... ...+++.++..++.|++.|+.|||+. +++||||+|+||+++.++.++|+|||.+....... .....
T Consensus 81 ~~~l~~~~-~~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~--~~~~~ 154 (277)
T cd05577 81 KYHIYNVG-EPGFPEARAIFYAAQIICGLEHLHQR---RIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGK--KIKGR 154 (277)
T ss_pred HHHHHHcC-cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEccCcchhhhccCC--ccccc
Confidence 99986432 23689999999999999999999999 99999999999999999999999999997654321 12223
Q ss_pred ecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccccCccCHHHHHHH
Q 002278 780 LGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAVRKT 859 (943)
Q Consensus 780 ~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 859 (943)
.++..|+|||+..+..++.++||||+||++|+|++|+.||........................+.+ ...+
T Consensus 155 ~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~ 225 (277)
T cd05577 155 AGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLEMAVEYPDKF---------SPEA 225 (277)
T ss_pred cCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhccccccccCCccC---------CHHH
Confidence 4788999999998888999999999999999999999999755431111111111000011111111 2466
Q ss_pred HHHHHHccCCCCCCCC-----CHHHHHHHHh
Q 002278 860 FQLALLCTKRYPSERP-----TMQEVARVLV 885 (943)
Q Consensus 860 ~~l~~~cl~~dP~~RP-----t~~el~~~L~ 885 (943)
.+++.+||+.+|++|| ++.+++.|-+
T Consensus 226 ~~li~~~l~~~p~~R~~~~~~~~~~ll~h~~ 256 (277)
T cd05577 226 KDLCEALLQKDPEKRLGCRGGSADEVREHPL 256 (277)
T ss_pred HHHHHHHccCChhHccCCCcccHHHHHhChh
Confidence 7899999999999999 7777877643
No 332
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=2.1e-33 Score=312.16 Aligned_cols=260 Identities=24% Similarity=0.292 Sum_probs=200.3
Q ss_pred HhhccccceEEeeeceEEEEEEEec-CCceEEEEEeccc--CcccHHHHHHHHHHHhcC-CCCCcceeeeEEecCC--cc
Q 002278 614 STENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQ--YPHNLREFETELETIGSI-RHRNIVSLHGYALSPY--GN 687 (943)
Q Consensus 614 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~--~~ 687 (943)
..++|+..+.||+|+||.||+|.+. +++.+|+|++... .......+.+|+.+++++ +||||+++++++...+ ..
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~ 84 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDI 84 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceE
Confidence 4567888899999999999999976 5788999988543 233445677899999999 9999999999986543 57
Q ss_pred eEEEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccc
Q 002278 688 LLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARC 767 (943)
Q Consensus 688 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~ 767 (943)
++||||++ ++|.+++.. ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 85 ~lv~e~~~-~~L~~~~~~----~~~~~~~~~~i~~qi~~~L~~LH~~---~i~H~dl~p~nill~~~~~~kl~d~g~~~~ 156 (337)
T cd07852 85 YLVFEYME-TDLHAVIRA----NILEDVHKRYIMYQLLKALKYIHSG---NVIHRDLKPSNILLNSDCRVKLADFGLARS 156 (337)
T ss_pred EEEecccc-cCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccchhc
Confidence 99999996 589888852 2688999999999999999999998 999999999999999999999999999987
Q ss_pred cCCCCC----ceeeeEecccceeCcccccc-CCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhcccccccc--
Q 002278 768 IPTAMP----HASTFVLGTIGYIDPEYAHT-SRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVME-- 840 (943)
Q Consensus 768 ~~~~~~----~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~-- 840 (943)
...... .......|+..|+|||++.+ ..++.++||||||+++|+|+||+.||................+....
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 236 (337)
T cd07852 157 LSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAED 236 (337)
T ss_pred cccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHH
Confidence 643321 12233458999999998765 56789999999999999999999999866554433322221111100
Q ss_pred --------------ccC----cccccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002278 841 --------------AVD----PEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARV 883 (943)
Q Consensus 841 --------------~~~----~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~ 883 (943)
... ........ .....+.+++..|++.+|++|||+.+++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~li~~~l~~~P~~Rps~~~il~~ 295 (337)
T cd07852 237 IESIKSPFAATMLDSLPSRPRKPLDELLP--KASDDALDLLKKLLVFNPNKRLTAEEALEH 295 (337)
T ss_pred HHHHHhhhHHHhhhhcccccccchhhhcc--CCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence 000 00000000 123567899999999999999999999987
No 333
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=8.3e-34 Score=329.42 Aligned_cols=268 Identities=18% Similarity=0.194 Sum_probs=190.9
Q ss_pred HhhccccceEEeeeceEEEEEEEecC--CceEEEEE--------------ec---ccCcccHHHHHHHHHHHhcCCCCCc
Q 002278 614 STENLSEKYIVGYGASSTVYKCALKN--SRPIAVKK--------------LY---NQYPHNLREFETELETIGSIRHRNI 674 (943)
Q Consensus 614 ~~~~~~~~~~lG~G~~g~Vy~~~~~~--~~~vavK~--------------~~---~~~~~~~~~~~~E~~~l~~l~h~ni 674 (943)
..++|++.+.||+|+||+||+|..+. +..++.|. +. .........+.+|++++++++||||
T Consensus 146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnI 225 (501)
T PHA03210 146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENI 225 (501)
T ss_pred hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCc
Confidence 45789999999999999999987643 22222221 10 1112234567899999999999999
Q ss_pred ceeeeEEecCCcceEEEEEccCCChhhhccCCCC--CccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEEC
Q 002278 675 VSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSK--KVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILID 752 (943)
Q Consensus 675 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~--~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~ 752 (943)
|++++++...+..++++|++. +++.+++..... ........+..++.|++.||+|||++ +||||||||+|||++
T Consensus 226 v~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~---gIiHrDLKP~NILl~ 301 (501)
T PHA03210 226 LKIEEILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDK---KLIHRDIKLENIFLN 301 (501)
T ss_pred CcEeEEEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEC
Confidence 999999999999999999984 577776643211 12234567788999999999999999 999999999999999
Q ss_pred CCCceeecccccccccCCCCCceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCC-CCCC--ccHHHHH
Q 002278 753 ENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKA-VDNE--SNLHQLI 829 (943)
Q Consensus 753 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p-~~~~--~~~~~~~ 829 (943)
.++.+||+|||+++.+............||..|+|||++.+..++.++|||||||++|||++|..+ +... ....+..
T Consensus 302 ~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~ 381 (501)
T PHA03210 302 CDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLL 381 (501)
T ss_pred CCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHH
Confidence 999999999999987755433333345699999999999999999999999999999999998754 4322 1222222
Q ss_pred HHhccccccccccCc-------------------ccccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 002278 830 MSKADDNTVMEAVDP-------------------EVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLV 885 (943)
Q Consensus 830 ~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~ 885 (943)
..........+.+.. .+............+.+++.+|++.||++|||+.|++++-+
T Consensus 382 ~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~hp~ 456 (501)
T PHA03210 382 KIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLALPL 456 (501)
T ss_pred HHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhChh
Confidence 221111110110000 00000000001134567789999999999999999998754
No 334
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=3.5e-33 Score=305.63 Aligned_cols=265 Identities=26% Similarity=0.285 Sum_probs=202.9
Q ss_pred HHhhccccceEEeeeceEEEEEEEec-CCceEEEEEecccC--cccHHHHHHHHHHHhcCCCCCcceeeeEEecCC----
Q 002278 613 RSTENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQY--PHNLREFETELETIGSIRHRNIVSLHGYALSPY---- 685 (943)
Q Consensus 613 ~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~---- 685 (943)
+..++|+..+.||+|+||.||+|..+ +++.||+|++.... ......+.+|++++++++||||+++++++.+..
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~ 83 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD 83 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence 45678999999999999999999986 47889999886432 233456788999999999999999999987654
Q ss_pred ------cceEEEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceee
Q 002278 686 ------GNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHL 759 (943)
Q Consensus 686 ------~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl 759 (943)
..++|+||+++ ++.+.+.. ....+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||
T Consensus 84 ~~~~~~~~~lv~e~~~~-~l~~~l~~--~~~~~~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~kl 157 (302)
T cd07864 84 FKKDKGAFYLVFEYMDH-DLMGLLES--GLVHFSEDHIKSFMKQLLEGLNYCHKK---NFLHRDIKCSNILLNNKGQIKL 157 (302)
T ss_pred ccccCCcEEEEEcccCc-cHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCcEEe
Confidence 67899999976 67666653 234689999999999999999999999 9999999999999999999999
Q ss_pred cccccccccCCCCCceeeeEecccceeCcccccc-CCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhcccccc
Q 002278 760 SDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHT-SRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTV 838 (943)
Q Consensus 760 ~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~ 838 (943)
+|||++...............++..|+|||.+.+ ..++.++||||+||++|||++|++||...................
T Consensus 158 ~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~ 237 (302)
T cd07864 158 ADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSP 237 (302)
T ss_pred CcccccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCC
Confidence 9999998765433222222346788999998765 457899999999999999999999998766554443332221111
Q ss_pred ccccCcccccC-----------------ccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002278 839 MEAVDPEVSVT-----------------CVDLSAVRKTFQLALLCTKRYPSERPTMQEVARV 883 (943)
Q Consensus 839 ~~~~~~~~~~~-----------------~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~ 883 (943)
.....+.+... .........+.+++..||+.+|++||++.+++.+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 299 (302)
T cd07864 238 CPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNS 299 (302)
T ss_pred ChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 11111110000 0000113567899999999999999999999876
No 335
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=5.4e-33 Score=305.35 Aligned_cols=265 Identities=22% Similarity=0.265 Sum_probs=199.3
Q ss_pred HhhccccceEEeeeceEEEEEEEec-CCceEEEEEecccC--cccHHHHHHHHHHHhcCCCCCcceeeeEEecCCc----
Q 002278 614 STENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQY--PHNLREFETELETIGSIRHRNIVSLHGYALSPYG---- 686 (943)
Q Consensus 614 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~---- 686 (943)
..++|+..+.||+|+||.||+|..+ +++.||+|++.... ......+.+|++++++++||||+++++++.....
T Consensus 10 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 89 (310)
T cd07865 10 EVSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNR 89 (310)
T ss_pred hhhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccC
Confidence 3467899999999999999999976 57899999885432 2223456789999999999999999999876543
Q ss_pred ----ceEEEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeeccc
Q 002278 687 ----NLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDF 762 (943)
Q Consensus 687 ----~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DF 762 (943)
.++||||+. +++.+.+.. ....+++.++..++.|++.||+|||++ +++|+||||+||+++.++.+||+||
T Consensus 90 ~~~~~~lv~e~~~-~~l~~~l~~--~~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~df 163 (310)
T cd07865 90 YKGSFYLVFEFCE-HDLAGLLSN--KNVKFTLSEIKKVMKMLLNGLYYIHRN---KILHRDMKAANILITKDGILKLADF 163 (310)
T ss_pred CCceEEEEEcCCC-cCHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEECCCCcEEECcC
Confidence 499999985 578887753 234689999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCCCc---eeeeEecccceeCccccccC-CCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhcccccc
Q 002278 763 GIARCIPTAMPH---ASTFVLGTIGYIDPEYAHTS-RLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTV 838 (943)
Q Consensus 763 Gla~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~ 838 (943)
|++..+...... ......++..|+|||.+.+. .++.++||||||+++|||+||+.||................+..
T Consensus 164 g~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~ 243 (310)
T cd07865 164 GLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSI 243 (310)
T ss_pred CCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCC
Confidence 999866432211 11234578899999988764 47889999999999999999999998766544333222211111
Q ss_pred ccccCcccc-----------cC--------ccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 002278 839 MEAVDPEVS-----------VT--------CVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVL 884 (943)
Q Consensus 839 ~~~~~~~~~-----------~~--------~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L 884 (943)
.....|... .. .........+.+++..|+..||++|||++++++|-
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h~ 308 (310)
T cd07865 244 TPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNHD 308 (310)
T ss_pred ChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcCC
Confidence 111111110 00 00000123556899999999999999999998763
No 336
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=9.5e-33 Score=295.80 Aligned_cols=250 Identities=26% Similarity=0.336 Sum_probs=199.2
Q ss_pred hccccceEEeeeceEEEEEEEec-CCceEEEEEeccc-----CcccHHHHHHHHHHHhcCCCCCcceeeeEEecC--Ccc
Q 002278 616 ENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQ-----YPHNLREFETELETIGSIRHRNIVSLHGYALSP--YGN 687 (943)
Q Consensus 616 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~ 687 (943)
.+|...+.||+|+||.||+|.++ +++.||+|.+... .......+.+|++++++++||||+++++++.+. ...
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 46888999999999999999975 5789999987422 123345788999999999999999999998764 347
Q ss_pred eEEEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccc
Q 002278 688 LLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARC 767 (943)
Q Consensus 688 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~ 767 (943)
++++||+++++|.+++. ....+++..+..++.|++.|++|||+. +++|+||||+||+++.++.++|+|||+++.
T Consensus 82 ~~v~e~~~~~~L~~~~~---~~~~l~~~~~~~~~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~ 155 (264)
T cd06653 82 SIFVEYMPGGSIKDQLK---AYGALTENVTRRYTRQILQGVSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKR 155 (264)
T ss_pred EEEEEeCCCCcHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECccccccc
Confidence 89999999999999886 334588999999999999999999999 999999999999999999999999999986
Q ss_pred cCCCCC--ceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcc
Q 002278 768 IPTAMP--HASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPE 845 (943)
Q Consensus 768 ~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 845 (943)
...... .......|+..|+|||+..+..++.++|+|||||++|||++|+.||............... +.....++.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~--~~~~~~p~~ 233 (264)
T cd06653 156 IQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAAIFKIATQ--PTKPMLPDG 233 (264)
T ss_pred cccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHcC--CCCCCCCcc
Confidence 532111 1112345889999999999888999999999999999999999999876554443322211 111111111
Q ss_pred cccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002278 846 VSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARV 883 (943)
Q Consensus 846 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~ 883 (943)
....+.+++..|+. +|.+||++.+++.|
T Consensus 234 ---------~~~~~~~~i~~~l~-~~~~r~~~~~~~~~ 261 (264)
T cd06653 234 ---------VSDACRDFLKQIFV-EEKRRPTAEFLLRH 261 (264)
T ss_pred ---------cCHHHHHHHHHHhc-CcccCccHHHHhcC
Confidence 12467789999999 57999999998875
No 337
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=3.9e-33 Score=298.47 Aligned_cols=243 Identities=23% Similarity=0.310 Sum_probs=197.5
Q ss_pred EeeeceEEEEEEEecC-CceEEEEEecccC---cccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEEccCCCh
Q 002278 624 VGYGASSTVYKCALKN-SRPIAVKKLYNQY---PHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSL 699 (943)
Q Consensus 624 lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 699 (943)
||.|+||.||+|.... ++.||+|.+.... ....+.+.+|+++++.++||||+++++++.++...++++||+++++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 6899999999999764 7899999886432 23446788999999999999999999999999999999999999999
Q ss_pred hhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCCceeeeE
Q 002278 700 WDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFV 779 (943)
Q Consensus 700 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~~ 779 (943)
.+++.. ...+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.++|+|||.++...... .....
T Consensus 81 ~~~l~~---~~~l~~~~~~~~~~~i~~~l~~lH~~---~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~--~~~~~ 152 (262)
T cd05572 81 WTILRD---RGLFDEYTARFYIACVVLAFEYLHNR---GIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ--KTWTF 152 (262)
T ss_pred HHHHhh---cCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc--ccccc
Confidence 999963 34589999999999999999999998 99999999999999999999999999998765432 22234
Q ss_pred ecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCc--cHHHHHHHhccccccccccCcccccCccCHHHHH
Q 002278 780 LGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNES--NLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAVR 857 (943)
Q Consensus 780 ~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 857 (943)
.|+..|+|||.+.+..++.++|+||+|+++|+|++|+.||.... ............. .+.++.. ...
T Consensus 153 ~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~------~~~~~~~-----~~~ 221 (262)
T cd05572 153 CGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGNG------KLEFPNY-----IDK 221 (262)
T ss_pred cCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhccCC------CCCCCcc-----cCH
Confidence 58899999999988889999999999999999999999997655 2222221111010 1111111 124
Q ss_pred HHHHHHHHccCCCCCCCCC-----HHHHHHHHh
Q 002278 858 KTFQLALLCTKRYPSERPT-----MQEVARVLV 885 (943)
Q Consensus 858 ~l~~l~~~cl~~dP~~RPt-----~~el~~~L~ 885 (943)
.+.+++..||+.+|++||+ +.|++++-+
T Consensus 222 ~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~~~ 254 (262)
T cd05572 222 AAKDLIKQLLRRNPEERLGNLKGGIKDIKKHKW 254 (262)
T ss_pred HHHHHHHHHccCChhhCcCCcccCHHHHhcChh
Confidence 6789999999999999999 888887644
No 338
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=6e-33 Score=302.43 Aligned_cols=263 Identities=22% Similarity=0.257 Sum_probs=198.9
Q ss_pred hccccceEEeeeceEEEEEEEec-CCceEEEEEecccCc--ccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEE
Q 002278 616 ENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQYP--HNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYD 692 (943)
Q Consensus 616 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 692 (943)
++|+..+.||+|++|+||+|..+ +++.||+|++..... .....+.+|++++++++||||+++++++.+....++|||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE 81 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence 46888999999999999999976 578899998854322 234568889999999999999999999999999999999
Q ss_pred EccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECC-CCceeecccccccccCCC
Q 002278 693 YMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDE-NFDAHLSDFGIARCIPTA 771 (943)
Q Consensus 693 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~-~~~~kl~DFGla~~~~~~ 771 (943)
|++ +++.+++... ....+++..+..++.|++.||+|||++ +++||||+|+||+++. ++.+||+|||++......
T Consensus 82 ~~~-~~l~~~~~~~-~~~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~ 156 (294)
T PLN00009 82 YLD-LDLKKHMDSS-PDFAKNPRLIKTYLYQILRGIAYCHSH---RVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIP 156 (294)
T ss_pred ccc-ccHHHHHHhC-CCCCcCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCcceEEEECCCCEEEEcccccccccCCC
Confidence 995 5787777532 223468888999999999999999999 9999999999999985 567999999999765432
Q ss_pred CCceeeeEecccceeCcccccc-CCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccC-------
Q 002278 772 MPHASTFVLGTIGYIDPEYAHT-SRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVD------- 843 (943)
Q Consensus 772 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~------- 843 (943)
... .....+++.|+|||++.+ ..++.++||||+||++|+|+||+.||....................+..+
T Consensus 157 ~~~-~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (294)
T PLN00009 157 VRT-FTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLP 235 (294)
T ss_pred ccc-cccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccch
Confidence 211 122347889999998866 45789999999999999999999999876554444332211111111000
Q ss_pred ------cccccCc---cCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 002278 844 ------PEVSVTC---VDLSAVRKTFQLALLCTKRYPSERPTMQEVARVL 884 (943)
Q Consensus 844 ------~~~~~~~---~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L 884 (943)
+...... ........+.+++.+|++.+|++||++.+++++-
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~~ 285 (294)
T PLN00009 236 DYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEHE 285 (294)
T ss_pred hhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcCc
Confidence 0000000 0001124567899999999999999999999863
No 339
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-34 Score=326.80 Aligned_cols=259 Identities=22% Similarity=0.243 Sum_probs=215.6
Q ss_pred HHHHHHhhccccceEEeeeceEEEEEEEecC-CceEEEEEecc---cCcccHHHHHHHHHHHhcCCCCCcceeeeEEecC
Q 002278 609 DDIMRSTENLSEKYIVGYGASSTVYKCALKN-SRPIAVKKLYN---QYPHNLREFETELETIGSIRHRNIVSLHGYALSP 684 (943)
Q Consensus 609 ~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~---~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 684 (943)
.+++...+.|.+.++||+|+||.|..++.+. ++.||+|++.+ ......+.|..|.++|..-..+=||.++-.|+++
T Consensus 68 ~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~ 147 (1317)
T KOG0612|consen 68 KELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDE 147 (1317)
T ss_pred HHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCc
Confidence 4445567889999999999999999999875 57779998865 2234456788999999999999999999999999
Q ss_pred CcceEEEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeeccccc
Q 002278 685 YGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGI 764 (943)
Q Consensus 685 ~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGl 764 (943)
...|+||||++||+|..++. ...++++..+..++..|+.||.-+|+. |+|||||||+|||+|..|++||+|||.
T Consensus 148 ~~LYlVMdY~pGGDlltLlS---k~~~~pE~~ArFY~aEiVlAldslH~m---gyVHRDiKPDNvLld~~GHikLADFGs 221 (1317)
T KOG0612|consen 148 RYLYLVMDYMPGGDLLTLLS---KFDRLPEDWARFYTAEIVLALDSLHSM---GYVHRDIKPDNVLLDKSGHIKLADFGS 221 (1317)
T ss_pred cceEEEEecccCchHHHHHh---hcCCChHHHHHHHHHHHHHHHHHHHhc---cceeccCCcceeEecccCcEeeccchh
Confidence 99999999999999999997 344799999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCceeeeEecccceeCcccccc-----CCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhcccc--c
Q 002278 765 ARCIPTAMPHASTFVLGTIGYIDPEYAHT-----SRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDN--T 837 (943)
Q Consensus 765 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~--~ 837 (943)
+-.+..+........+|||.|++||++.. +.|++.+|.||+||++|||+.|..||+.+.-.+++-.+..... .
T Consensus 222 Clkm~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~hk~~l~ 301 (1317)
T KOG0612|consen 222 CLKMDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNHKESLS 301 (1317)
T ss_pred HHhcCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhchhhhcC
Confidence 98887666666667789999999998762 5699999999999999999999999998887777777665522 2
Q ss_pred cccccCcccccCccCHHHHHHHHHHHHHccCCCCCCCCC---HHHHHHHHh
Q 002278 838 VMEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPT---MQEVARVLV 885 (943)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt---~~el~~~L~ 885 (943)
+++..+ ++ ...-++|+..+. +|+.|-. +.++..|..
T Consensus 302 FP~~~~--VS---------eeakdLI~~ll~-~~e~RLgrngiedik~HpF 340 (1317)
T KOG0612|consen 302 FPDETD--VS---------EEAKDLIEALLC-DREVRLGRNGIEDIKNHPF 340 (1317)
T ss_pred CCcccc--cC---------HHHHHHHHHHhc-ChhhhcccccHHHHHhCcc
Confidence 332221 22 344566766554 5888887 999988764
No 340
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=3.4e-33 Score=301.51 Aligned_cols=242 Identities=24% Similarity=0.273 Sum_probs=186.8
Q ss_pred EEeeeceEEEEEEEec-CCceEEEEEecccCc---ccHHHHHHHHHHH---hcCCCCCcceeeeEEecCCcceEEEEEcc
Q 002278 623 IVGYGASSTVYKCALK-NSRPIAVKKLYNQYP---HNLREFETELETI---GSIRHRNIVSLHGYALSPYGNLLFYDYMV 695 (943)
Q Consensus 623 ~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l---~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 695 (943)
.||+|+||.||+|... +++.+|+|.+..... .....+.+|..++ ...+||+|+.+++++...+..++||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 3899999999999976 578899998864321 1122334444433 34479999999999999999999999999
Q ss_pred CCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCCce
Q 002278 696 NGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHA 775 (943)
Q Consensus 696 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~~~ 775 (943)
+|+|.+++. ....+++..+..++.|++.||+|||+. +|+||||||+||++++++.++++|||++........
T Consensus 81 ~~~L~~~i~---~~~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~~-- 152 (279)
T cd05633 81 GGDLHYHLS---QHGVFSEKEMRFYATEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP-- 152 (279)
T ss_pred CCCHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHHC---CcCCCCCCHHHEEECCCCCEEEccCCcceeccccCc--
Confidence 999999886 345699999999999999999999999 999999999999999999999999999975543221
Q ss_pred eeeEecccceeCccccc-cCCCCCcchhhhHHHHHHHHHhCCCCCCCCcc--HHHHHHHhccccccccccCcccccCccC
Q 002278 776 STFVLGTIGYIDPEYAH-TSRLNEKSDVYSFGIVLLEILTGKKAVDNESN--LHQLIMSKADDNTVMEAVDPEVSVTCVD 852 (943)
Q Consensus 776 ~~~~~gt~~y~aPE~~~-~~~~~~~~DvwSlGvil~elltG~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 852 (943)
....|+..|+|||... +..++.++||||+||++|||++|+.||..... ........ .. ....++.
T Consensus 153 -~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~---~~----~~~~~~~---- 220 (279)
T cd05633 153 -HASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMT---LT----VNVELPD---- 220 (279)
T ss_pred -cCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHHh---hc----CCcCCcc----
Confidence 2235899999999886 45689999999999999999999999974322 11111111 00 1111111
Q ss_pred HHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHHHh
Q 002278 853 LSAVRKTFQLALLCTKRYPSERP-----TMQEVARVLV 885 (943)
Q Consensus 853 ~~~~~~l~~l~~~cl~~dP~~RP-----t~~el~~~L~ 885 (943)
.....+.+++..|++.||++|| +++++++|.+
T Consensus 221 -~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h~~ 257 (279)
T cd05633 221 -SFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHVF 257 (279)
T ss_pred -ccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhCcc
Confidence 1124677899999999999999 6999998754
No 341
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=7.8e-33 Score=296.59 Aligned_cols=247 Identities=22% Similarity=0.273 Sum_probs=191.7
Q ss_pred HHHHHHHhhccccceEE--eeeceEEEEEEEec-CCceEEEEEecccCcccHHHHHHHHHHHhcC-CCCCcceeeeEEec
Q 002278 608 FDDIMRSTENLSEKYIV--GYGASSTVYKCALK-NSRPIAVKKLYNQYPHNLREFETELETIGSI-RHRNIVSLHGYALS 683 (943)
Q Consensus 608 ~~~~~~~~~~~~~~~~l--G~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 683 (943)
..++....++|+..+.+ |+|+||.||++..+ ++..+|+|.+........ |+.....+ +||||+++++++..
T Consensus 6 ~~~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-----e~~~~~~~~~h~~iv~~~~~~~~ 80 (267)
T PHA03390 6 LSELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAI-----EPMVHQLMKDNPNFIKLYYSVTT 80 (267)
T ss_pred HHHHHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcchh-----hHHHHHHhhcCCCEEEEEEEEec
Confidence 34455556677776666 99999999999976 567788888754322111 22222222 69999999999999
Q ss_pred CCcceEEEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCC-ceeeccc
Q 002278 684 PYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENF-DAHLSDF 762 (943)
Q Consensus 684 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~-~~kl~DF 762 (943)
++..++||||+++|+|.+++.. ...+++.++..++.|+++|++|||+. +++||||||+||+++.++ .++|+||
T Consensus 81 ~~~~~iv~e~~~~~~L~~~l~~---~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~l~df 154 (267)
T PHA03390 81 LKGHVLIMDYIKDGDLFDLLKK---EGKLSEAEVKKIIRQLVEALNDLHKH---NIIHNDIKLENVLYDRAKDRIYLCDY 154 (267)
T ss_pred CCeeEEEEEcCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEeCCCCeEEEecC
Confidence 9999999999999999999863 33789999999999999999999999 999999999999999888 9999999
Q ss_pred ccccccCCCCCceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccH----HHHHHHhcccccc
Q 002278 763 GIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNL----HQLIMSKADDNTV 838 (943)
Q Consensus 763 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~----~~~~~~~~~~~~~ 838 (943)
|+++...... ...|+..|+|||++.+..++.++||||+||++|||++|+.||...... ..+.... ..
T Consensus 155 g~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~---~~- 225 (267)
T PHA03390 155 GLCKIIGTPS-----CYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQ---QK- 225 (267)
T ss_pred ccceecCCCc-----cCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhh---cc-
Confidence 9998664332 234789999999999989999999999999999999999999744321 1111111 00
Q ss_pred ccccCcccccCccCHHHHHHHHHHHHHccCCCCCCCCC-HHHHHHH
Q 002278 839 MEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPT-MQEVARV 883 (943)
Q Consensus 839 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt-~~el~~~ 883 (943)
.....+ .....+.+++..|++.+|.+||+ ++++++|
T Consensus 226 ~~~~~~---------~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h 262 (267)
T PHA03390 226 KLPFIK---------NVSKNANDFVQSMLKYNINYRLTNYNEIIKH 262 (267)
T ss_pred cCCccc---------ccCHHHHHHHHHHhccChhhCCchHHHHhcC
Confidence 000111 12246778999999999999996 6999876
No 342
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=3.4e-33 Score=307.90 Aligned_cols=263 Identities=22% Similarity=0.285 Sum_probs=196.0
Q ss_pred ccccceEEeeeceEEEEEEEecC---CceEEEEEecccC---cccHHHHHHHHHHHhcCCCCCcceeeeEEecC--Ccce
Q 002278 617 NLSEKYIVGYGASSTVYKCALKN---SRPIAVKKLYNQY---PHNLREFETELETIGSIRHRNIVSLHGYALSP--YGNL 688 (943)
Q Consensus 617 ~~~~~~~lG~G~~g~Vy~~~~~~---~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~ 688 (943)
+|+..+.||+|+||.||+|..+. ++.||+|.+.... ....+.+.+|+++++.++||||+++++++.+. ...+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 47788899999999999999764 6899999987632 34456778899999999999999999999988 7789
Q ss_pred EEEEEccCCChhhhccCCC--CCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECC----CCceeeccc
Q 002278 689 LFYDYMVNGSLWDLLHGPS--KKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDE----NFDAHLSDF 762 (943)
Q Consensus 689 lv~e~~~~g~L~~~l~~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~----~~~~kl~DF 762 (943)
+||||+++ ++.+++.... ....+++..+..++.|++.||+|||+. +|+||||||+||+++. ++.+||+||
T Consensus 81 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~h~dlkp~Nil~~~~~~~~~~~kl~Df 156 (316)
T cd07842 81 LLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSN---WVLHRDLKPANILVMGEGPERGVVKIGDL 156 (316)
T ss_pred EEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEEcCCCCccceEEECCC
Confidence 99999964 6766654221 223689999999999999999999999 9999999999999999 899999999
Q ss_pred ccccccCCCCC--ceeeeEecccceeCccccccC-CCCCcchhhhHHHHHHHHHhCCCCCCCCccHH---------HHHH
Q 002278 763 GIARCIPTAMP--HASTFVLGTIGYIDPEYAHTS-RLNEKSDVYSFGIVLLEILTGKKAVDNESNLH---------QLIM 830 (943)
Q Consensus 763 Gla~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvil~elltG~~p~~~~~~~~---------~~~~ 830 (943)
|+++....... .......++..|+|||++.+. .++.++|||||||++|||++|++||....... ....
T Consensus 157 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (316)
T cd07842 157 GLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLER 236 (316)
T ss_pred ccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHH
Confidence 99987643322 112234578999999987764 57899999999999999999999997543211 0000
Q ss_pred Hhccccc--------------ccc----ccCcccccCc----cCH--HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002278 831 SKADDNT--------------VME----AVDPEVSVTC----VDL--SAVRKTFQLALLCTKRYPSERPTMQEVARV 883 (943)
Q Consensus 831 ~~~~~~~--------------~~~----~~~~~~~~~~----~~~--~~~~~l~~l~~~cl~~dP~~RPt~~el~~~ 883 (943)
....... ... .......... ... .....+.+++.+|++.||++|||+.|++++
T Consensus 237 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~ 313 (316)
T cd07842 237 IFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEH 313 (316)
T ss_pred HHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 0000000 000 0000000000 000 122467889999999999999999999876
No 343
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=4.6e-33 Score=302.82 Aligned_cols=258 Identities=17% Similarity=0.193 Sum_probs=182.8
Q ss_pred hhccccceEEeeeceEEEEEEEecCC----ceEEEEEecccCcccH-----------HHHHHHHHHHhcCCCCCcceeee
Q 002278 615 TENLSEKYIVGYGASSTVYKCALKNS----RPIAVKKLYNQYPHNL-----------REFETELETIGSIRHRNIVSLHG 679 (943)
Q Consensus 615 ~~~~~~~~~lG~G~~g~Vy~~~~~~~----~~vavK~~~~~~~~~~-----------~~~~~E~~~l~~l~h~niv~l~~ 679 (943)
.++|.+.+.||+|+||+||+|...++ ..+|+|.......... .....+...+..+.|++++++++
T Consensus 11 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~ 90 (294)
T PHA02882 11 GKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYG 90 (294)
T ss_pred CCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEE
Confidence 36899999999999999999997654 3455554322211110 11123344556778999999999
Q ss_pred EEecCC----cceEEEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCC
Q 002278 680 YALSPY----GNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENF 755 (943)
Q Consensus 680 ~~~~~~----~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~ 755 (943)
++.... ..++++|++. .++.+.+.. ....++..+..++.|++.||+|||+. +|+||||||+||+++.++
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~---~iiHrDiKp~Nill~~~~ 163 (294)
T PHA02882 91 CGSFKRCRMYYRFILLEKLV-ENTKEIFKR---IKCKNKKLIKNIMKDMLTTLEYIHEH---GISHGDIKPENIMVDGNN 163 (294)
T ss_pred eeeEecCCceEEEEEEehhc-cCHHHHHHh---hccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCC
Confidence 775543 2366777663 466666542 23357888999999999999999999 999999999999999999
Q ss_pred ceeecccccccccCCCCC------ceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHH
Q 002278 756 DAHLSDFGIARCIPTAMP------HASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLI 829 (943)
Q Consensus 756 ~~kl~DFGla~~~~~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~ 829 (943)
.++|+|||+|+.+..... .......||+.|+|||+..+..++.++|||||||++|||++|+.||.+.......+
T Consensus 164 ~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~ 243 (294)
T PHA02882 164 RGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLI 243 (294)
T ss_pred cEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHH
Confidence 999999999987643211 11122459999999999999999999999999999999999999998653322222
Q ss_pred HHhccccccccccCcccccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 002278 830 MSKADDNTVMEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVL 884 (943)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L 884 (943)
.....+ .......+..... .....+.+++..|++.+|++||++.++.+.+
T Consensus 244 ~~~~~~-~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~ 293 (294)
T PHA02882 244 HAAKCD-FIKRLHEGKIKIK----NANKFIYDFIECVTKLSYEEKPDYDALIKIF 293 (294)
T ss_pred HHhHHH-HHHHhhhhhhccC----CCCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence 111100 0000000111000 1125678999999999999999999998865
No 344
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=1.3e-32 Score=302.79 Aligned_cols=254 Identities=27% Similarity=0.384 Sum_probs=202.8
Q ss_pred hccccceEEeeeceEEEEEEEec-CCceEEEEEecccC---cccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEE
Q 002278 616 ENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQY---PHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFY 691 (943)
Q Consensus 616 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 691 (943)
+.|+..+.||+|+||.||+|... ++..||+|++.... ......+.+|+++++.++|||++++++++.++...++||
T Consensus 25 ~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 104 (317)
T cd06635 25 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVM 104 (317)
T ss_pred hhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEE
Confidence 34777888999999999999975 57889999886432 233456888999999999999999999999999999999
Q ss_pred EEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCC
Q 002278 692 DYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTA 771 (943)
Q Consensus 692 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~ 771 (943)
||++ |++.+++.. ....+++.++..++.|++.|+.|||+. +|+||||+|+||+++.++.++|+|||++......
T Consensus 105 e~~~-g~l~~~~~~--~~~~l~~~~~~~i~~~i~~~l~~lH~~---~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~ 178 (317)
T cd06635 105 EYCL-GSASDLLEV--HKKPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSASIASPA 178 (317)
T ss_pred eCCC-CCHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcccEEECCCCCEEEecCCCccccCCc
Confidence 9996 577777652 234689999999999999999999999 9999999999999999999999999998755332
Q ss_pred CCceeeeEecccceeCccccc---cCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCccccc
Q 002278 772 MPHASTFVLGTIGYIDPEYAH---TSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSV 848 (943)
Q Consensus 772 ~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 848 (943)
....|++.|+|||++. ...++.++|||||||++|||++|+.||.................. ....
T Consensus 179 -----~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~-------~~~~ 246 (317)
T cd06635 179 -----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESP-------TLQS 246 (317)
T ss_pred -----ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhccCC-------CCCC
Confidence 2235888999999874 456889999999999999999999999876544433332222111 0110
Q ss_pred CccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcCCCC
Q 002278 849 TCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLVSLLPAP 891 (943)
Q Consensus 849 ~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~~~~~~ 891 (943)
......+.+++.+|++.+|.+||++.+++++.+......
T Consensus 247 ----~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~~ 285 (317)
T cd06635 247 ----NEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLRERP 285 (317)
T ss_pred ----ccccHHHHHHHHHHccCCcccCcCHHHHHhChhhhccCc
Confidence 012245778999999999999999999999887655443
No 345
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=1.1e-32 Score=293.37 Aligned_cols=248 Identities=25% Similarity=0.382 Sum_probs=206.1
Q ss_pred ccccceEEeeeceEEEEEEEec-CCceEEEEEecccCc--ccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEE
Q 002278 617 NLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQYP--HNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDY 693 (943)
Q Consensus 617 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 693 (943)
+|+..+.||+|++|.||+|... .++.||+|.+..... .....+.+|++++++++|||++++++++.+....+++|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY 80 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence 4778889999999999999876 578899999876543 4556789999999999999999999999999999999999
Q ss_pred ccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCC
Q 002278 694 MVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMP 773 (943)
Q Consensus 694 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~ 773 (943)
+++++|.+++.. ...+++..+..++.|++.|+.|||+. +|+||||||+||+++.++.++|+|||.+........
T Consensus 81 ~~~~~L~~~~~~---~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~ 154 (254)
T cd06627 81 AENGSLRQIIKK---FGPFPESLVAVYVYQVLQGLAYLHEQ---GVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSK 154 (254)
T ss_pred CCCCcHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEECCCCCEEEeccccceecCCCcc
Confidence 999999999863 35789999999999999999999999 999999999999999999999999999987754433
Q ss_pred ceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccccCccCH
Q 002278 774 HASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDL 853 (943)
Q Consensus 774 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 853 (943)
. .....|+..|+|||...+..++.++||||+|+++|+|++|+.||................. ....+.+
T Consensus 155 ~-~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~------- 223 (254)
T cd06627 155 D-DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQDDH---PPLPEGI------- 223 (254)
T ss_pred c-ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhccCC---CCCCCCC-------
Confidence 2 2234588999999999888889999999999999999999999987665444333221111 1111111
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002278 854 SAVRKTFQLALLCTKRYPSERPTMQEVARV 883 (943)
Q Consensus 854 ~~~~~l~~l~~~cl~~dP~~RPt~~el~~~ 883 (943)
...+.+++.+|+..+|++||++.+++.+
T Consensus 224 --~~~~~~~i~~~l~~~p~~R~~~~~~l~~ 251 (254)
T cd06627 224 --SPELKDFLMQCFQKDPNLRPTAKQLLKH 251 (254)
T ss_pred --CHHHHHHHHHHHhCChhhCcCHHHHhcC
Confidence 2466789999999999999999999864
No 346
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=5.2e-33 Score=301.02 Aligned_cols=257 Identities=23% Similarity=0.252 Sum_probs=195.0
Q ss_pred cccceEEeeeceEEEEEEEec-CCceEEEEEecccC-cccHHHHHHHHHHHhcCC-CCCcceeeeEEecC--CcceEEEE
Q 002278 618 LSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQY-PHNLREFETELETIGSIR-HRNIVSLHGYALSP--YGNLLFYD 692 (943)
Q Consensus 618 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~--~~~~lv~e 692 (943)
|+..+.||+|+||.||+|..+ +++.||+|++.... ........+|+.+++++. ||||+++++++.+. +..++|||
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e 80 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE 80 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence 567788999999999999975 57889999886542 222334457888898885 99999999999887 78899999
Q ss_pred EccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCC
Q 002278 693 YMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAM 772 (943)
Q Consensus 693 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~ 772 (943)
|++ |++.+.+.. ....+++.++..++.|++.||+|||+. +++||||||+||+++. +.+||+|||+++......
T Consensus 81 ~~~-~~l~~~l~~--~~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~ 153 (282)
T cd07831 81 LMD-MNLYELIKG--RKRPLPEKRVKSYMYQLLKSLDHMHRN---GIFHRDIKPENILIKD-DILKLADFGSCRGIYSKP 153 (282)
T ss_pred cCC-ccHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEcC-CCeEEEecccccccccCC
Confidence 996 578887753 234689999999999999999999999 9999999999999999 999999999998764332
Q ss_pred CceeeeEecccceeCcccccc-CCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhcccccccc----------c
Q 002278 773 PHASTFVLGTIGYIDPEYAHT-SRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVME----------A 841 (943)
Q Consensus 773 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~----------~ 841 (943)
.. ....++..|+|||+..+ ..++.++||||+||++|||++|+.||.+.+............+...+ .
T Consensus 154 ~~--~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (282)
T cd07831 154 PY--TEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRH 231 (282)
T ss_pred Cc--CCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhccccc
Confidence 22 22357899999997654 55789999999999999999999999876544332222111111000 0
Q ss_pred cCcccccCc------cCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002278 842 VDPEVSVTC------VDLSAVRKTFQLALLCTKRYPSERPTMQEVARV 883 (943)
Q Consensus 842 ~~~~~~~~~------~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~ 883 (943)
....++... ........+.+++.+|++++|++||++.+++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~ 279 (282)
T cd07831 232 MNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRH 279 (282)
T ss_pred ccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhC
Confidence 000000000 001124678899999999999999999999886
No 347
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=1.5e-32 Score=293.30 Aligned_cols=252 Identities=27% Similarity=0.387 Sum_probs=206.3
Q ss_pred ccccceEEeeeceEEEEEEEec-CCceEEEEEecccCc--ccHHHHHHHHHHHhcCCCCCcceeeeEEecC--CcceEEE
Q 002278 617 NLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQYP--HNLREFETELETIGSIRHRNIVSLHGYALSP--YGNLLFY 691 (943)
Q Consensus 617 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lv~ 691 (943)
+|...+.||+|++|.||+|..+ +++.|++|++..... ...+.+.+|++++++++||||+++++.+... ...++++
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 80 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL 80 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence 4677889999999999999987 688999998865542 4467889999999999999999999999988 7899999
Q ss_pred EEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCC
Q 002278 692 DYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTA 771 (943)
Q Consensus 692 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~ 771 (943)
||+++++|.+++.. ...+++.++..++.|++.|++|||+. +++|+||+|+||+++.++.++|+|||.+......
T Consensus 81 e~~~~~~L~~~~~~---~~~~~~~~~~~~~~~l~~~l~~lh~~---~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~ 154 (260)
T cd06606 81 EYVSGGSLSSLLKK---FGKLPEPVIRKYTRQILEGLAYLHSN---GIVHRDIKGANILVDSDGVVKLADFGCAKRLGDI 154 (260)
T ss_pred EecCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEcccccEEecccc
Confidence 99999999999863 33789999999999999999999998 9999999999999999999999999999877554
Q ss_pred CCc-eeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccccCc
Q 002278 772 MPH-ASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTC 850 (943)
Q Consensus 772 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 850 (943)
... ......++..|+|||...+...+.++||||||+++|+|++|+.||.................. . +.++.
T Consensus 155 ~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~-~----~~~~~-- 227 (260)
T cd06606 155 ETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAALYKIGSSGE-P----PEIPE-- 227 (260)
T ss_pred cccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHhccccCC-C----cCCCc--
Confidence 321 122345889999999999888999999999999999999999999876533322222211011 1 11111
Q ss_pred cCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 002278 851 VDLSAVRKTFQLALLCTKRYPSERPTMQEVARVL 884 (943)
Q Consensus 851 ~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L 884 (943)
.....+.+++.+|+..+|++||++.+++++-
T Consensus 228 ---~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~~ 258 (260)
T cd06606 228 ---HLSEEAKDFLRKCLRRDPKKRPTADELLQHP 258 (260)
T ss_pred ---ccCHHHHHHHHHhCcCChhhCCCHHHHhhCC
Confidence 1135678899999999999999999998863
No 348
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=7e-34 Score=281.51 Aligned_cols=267 Identities=23% Similarity=0.270 Sum_probs=205.9
Q ss_pred hhccccceEEeeeceEEEEEEEecC-----CceEEEEEecccCc--ccHHHHHHHHHHHhcCCCCCcceeeeEEec-CCc
Q 002278 615 TENLSEKYIVGYGASSTVYKCALKN-----SRPIAVKKLYNQYP--HNLREFETELETIGSIRHRNIVSLHGYALS-PYG 686 (943)
Q Consensus 615 ~~~~~~~~~lG~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~ 686 (943)
...|+.+..||+|.||.||+|.-++ ...+|+|+++.... ......-+|+..++.++||||+.+..++.. +..
T Consensus 23 l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~ 102 (438)
T KOG0666|consen 23 LFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKK 102 (438)
T ss_pred HHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCce
Confidence 4578899999999999999996442 23789999976532 223456789999999999999999999877 778
Q ss_pred ceEEEEEccCCChhhhccC--CCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCC----Cceeec
Q 002278 687 NLLFYDYMVNGSLWDLLHG--PSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDEN----FDAHLS 760 (943)
Q Consensus 687 ~~lv~e~~~~g~L~~~l~~--~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~----~~~kl~ 760 (943)
.++++||++. +|..+++. ......++...+..|+.||+.|+.|||+. =|+||||||.|||+..+ |.|||+
T Consensus 103 v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~N---WvlHRDLKPaNIlvmgdgperG~VKIa 178 (438)
T KOG0666|consen 103 VWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSN---WVLHRDLKPANILVMGDGPERGRVKIA 178 (438)
T ss_pred EEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhh---heeeccCCcceEEEeccCCccCeeEee
Confidence 8999999865 78888753 22335789999999999999999999998 79999999999999877 899999
Q ss_pred ccccccccCCCCCc--eeeeEecccceeCccccccC-CCCCcchhhhHHHHHHHHHhCCCCCCCCc---------cHHHH
Q 002278 761 DFGIARCIPTAMPH--ASTFVLGTIGYIDPEYAHTS-RLNEKSDVYSFGIVLLEILTGKKAVDNES---------NLHQL 828 (943)
Q Consensus 761 DFGla~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvil~elltG~~p~~~~~---------~~~~~ 828 (943)
|||+|+.+...... ....++-|.+|+|||++.|. -|+.+.||||.|||..||+|-++.|.+.. ...++
T Consensus 179 DlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl 258 (438)
T KOG0666|consen 179 DLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQL 258 (438)
T ss_pred cccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHH
Confidence 99999988543221 23346679999999999886 48999999999999999999988886431 23344
Q ss_pred HHHhccccccccccCcccccCccC----------------HH--------HHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 002278 829 IMSKADDNTVMEAVDPEVSVTCVD----------------LS--------AVRKTFQLALLCTKRYPSERPTMQEVARVL 884 (943)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~----------------~~--------~~~~l~~l~~~cl~~dP~~RPt~~el~~~L 884 (943)
.++....+...+..+|.+.....- .. ....-++++..++..||.+|.|+.+.+++.
T Consensus 259 ~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh~ 338 (438)
T KOG0666|consen 259 DRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEHP 338 (438)
T ss_pred HHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhccc
Confidence 444444444444444443211100 00 012256889999999999999999999875
Q ss_pred h
Q 002278 885 V 885 (943)
Q Consensus 885 ~ 885 (943)
-
T Consensus 339 y 339 (438)
T KOG0666|consen 339 Y 339 (438)
T ss_pred c
Confidence 3
No 349
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=5.8e-33 Score=307.86 Aligned_cols=262 Identities=25% Similarity=0.280 Sum_probs=205.1
Q ss_pred ccccceEEeeeceEEEEEEEec-CCceEEEEEecccC--cccHHHHHHHHHHHhcCCCCCcceeeeEEecCC-----cce
Q 002278 617 NLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQY--PHNLREFETELETIGSIRHRNIVSLHGYALSPY-----GNL 688 (943)
Q Consensus 617 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~~~ 688 (943)
+|+..+.||+|+||.||+|... .++.||+|++.... ....+.+.+|+++++.++||||+++++++.... ..+
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 4778899999999999999976 47899999987644 344567889999999999999999999998775 679
Q ss_pred EEEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeeccccccccc
Q 002278 689 LFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCI 768 (943)
Q Consensus 689 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~ 768 (943)
++|||++ ++|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++|+|||++...
T Consensus 81 lv~e~~~-~~l~~~l~~---~~~l~~~~~~~i~~~l~~~l~~LH~~---gi~H~dlkp~nili~~~~~~~L~dfg~~~~~ 153 (330)
T cd07834 81 IVTELME-TDLHKVIKS---PQPLTDDHIQYFLYQILRGLKYLHSA---NVIHRDLKPSNILVNSNCDLKICDFGLARGV 153 (330)
T ss_pred EEecchh-hhHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccCceEee
Confidence 9999997 588888863 34799999999999999999999999 9999999999999999999999999999877
Q ss_pred CCCCC--ceeeeEecccceeCccccccC-CCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCc-
Q 002278 769 PTAMP--HASTFVLGTIGYIDPEYAHTS-RLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDP- 844 (943)
Q Consensus 769 ~~~~~--~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~- 844 (943)
..... .......++..|+|||++.+. .++.++|+||+|+++|+|++|+.||.+..............+........
T Consensus 154 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 233 (330)
T cd07834 154 DPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKF 233 (330)
T ss_pred cccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhh
Confidence 54421 112234578899999999887 78999999999999999999999998766544333322211111110000
Q ss_pred ---------------ccccCc--cCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 002278 845 ---------------EVSVTC--VDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLV 885 (943)
Q Consensus 845 ---------------~~~~~~--~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~ 885 (943)
...... ........+.+++.+||+.+|++||++.+++++-+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~ 291 (330)
T cd07834 234 ITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPY 291 (330)
T ss_pred ccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCcc
Confidence 000000 00012356778999999999999999999998743
No 350
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=3.8e-33 Score=303.07 Aligned_cols=257 Identities=27% Similarity=0.330 Sum_probs=195.4
Q ss_pred ccccceEEeeeceEEEEEEEec-CCceEEEEEecccC-cccHHHHHHHHHHHhcCC-CCCcceeeeEEecCCcceEEEEE
Q 002278 617 NLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQY-PHNLREFETELETIGSIR-HRNIVSLHGYALSPYGNLLFYDY 693 (943)
Q Consensus 617 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~ 693 (943)
+|+..+.||+|+||.||++.+. .++.||+|++.... ......+.+|+.++.++. ||||+++++++..+...+++|||
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~ 84 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMEL 84 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEec
Confidence 4556678999999999999976 57899999986543 234557889999999996 99999999999998899999999
Q ss_pred ccCCChhhhccC--CCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCC
Q 002278 694 MVNGSLWDLLHG--PSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTA 771 (943)
Q Consensus 694 ~~~g~L~~~l~~--~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~ 771 (943)
+. +++.++... ......+++..+..++.+++.||+|||+.+ +++||||||+||+++.++.+||+|||+++.....
T Consensus 85 ~~-~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~ 161 (288)
T cd06616 85 MD-ISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEEL--KIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDS 161 (288)
T ss_pred cc-CCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcC--CeeccCCCHHHEEEccCCcEEEeecchhHHhccC
Confidence 85 455443221 112356899999999999999999999732 8999999999999999999999999999765433
Q ss_pred CCceeeeEecccceeCccccccC---CCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCccccc
Q 002278 772 MPHASTFVLGTIGYIDPEYAHTS---RLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSV 848 (943)
Q Consensus 772 ~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 848 (943)
... ....|+..|+|||++.+. .++.++||||+||++|||++|+.||................. .+.+..
T Consensus 162 ~~~--~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~------~~~~~~ 233 (288)
T cd06616 162 IAK--TRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQLTQVVKGD------PPILSN 233 (288)
T ss_pred Ccc--ccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcchHHHHHhhhcCCC------CCcCCC
Confidence 221 223488999999998876 688999999999999999999999976543222111111111 111111
Q ss_pred CccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 002278 849 TCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLV 885 (943)
Q Consensus 849 ~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~ 885 (943)
.. .......+.+++.+|++.+|++|||+.+++++-+
T Consensus 234 ~~-~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~~~ 269 (288)
T cd06616 234 SE-EREFSPSFVNFINLCLIKDESKRPKYKELLEHPF 269 (288)
T ss_pred cC-CCccCHHHHHHHHHHccCChhhCcCHHHHhcChh
Confidence 00 0112356789999999999999999999998744
No 351
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=6.3e-33 Score=301.64 Aligned_cols=249 Identities=21% Similarity=0.280 Sum_probs=196.6
Q ss_pred ccccceEEeeeceEEEEEEEec----CCceEEEEEecccC----cccHHHHHHHHHHHhcC-CCCCcceeeeEEecCCcc
Q 002278 617 NLSEKYIVGYGASSTVYKCALK----NSRPIAVKKLYNQY----PHNLREFETELETIGSI-RHRNIVSLHGYALSPYGN 687 (943)
Q Consensus 617 ~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 687 (943)
+|+..+.||+|+||.||.|... +++.||+|.+.... ....+.+.+|+++++.+ +|++|+++++++..+...
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 4677889999999999999863 57889999986432 22345678899999999 589999999999998889
Q ss_pred eEEEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccc
Q 002278 688 LLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARC 767 (943)
Q Consensus 688 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~ 767 (943)
++||||+++++|.+++. ....+++..+..++.|++.||+|||+. +++||||+|+||+++.++.+||+|||+++.
T Consensus 81 ~lv~e~~~~~~L~~~l~---~~~~l~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~ 154 (290)
T cd05613 81 HLILDYINGGELFTHLS---QRERFKEQEVQIYSGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSKE 154 (290)
T ss_pred EEEEecCCCCcHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEECCCCCEEEeeCcccee
Confidence 99999999999999986 334688999999999999999999998 999999999999999999999999999987
Q ss_pred cCCCCCceeeeEecccceeCccccccC--CCCCcchhhhHHHHHHHHHhCCCCCCCCcc---HHHHHHHhcccccccccc
Q 002278 768 IPTAMPHASTFVLGTIGYIDPEYAHTS--RLNEKSDVYSFGIVLLEILTGKKAVDNESN---LHQLIMSKADDNTVMEAV 842 (943)
Q Consensus 768 ~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DvwSlGvil~elltG~~p~~~~~~---~~~~~~~~~~~~~~~~~~ 842 (943)
.............|+..|+|||...+. .++.++||||||+++|+|++|+.||..... ............
T Consensus 155 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~------ 228 (290)
T cd05613 155 FHEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILKSE------ 228 (290)
T ss_pred cccccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhhccC------
Confidence 644332333345589999999998753 467899999999999999999999964322 122221111111
Q ss_pred CcccccCccCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 002278 843 DPEVSVTCVDLSAVRKTFQLALLCTKRYPSERP-----TMQEVARV 883 (943)
Q Consensus 843 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~el~~~ 883 (943)
+.++. .....+.+++.+|+..||++|| ++.++.++
T Consensus 229 -~~~~~-----~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~ 268 (290)
T cd05613 229 -PPYPQ-----EMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKH 268 (290)
T ss_pred -CCCCc-----cCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcC
Confidence 11110 1124567899999999999997 77777765
No 352
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=6.9e-33 Score=296.23 Aligned_cols=242 Identities=22% Similarity=0.205 Sum_probs=189.0
Q ss_pred eEEeeeceEEEEEEEec-CCceEEEEEecccCc---ccHHHHHHHHHHH-hcCCCCCcceeeeEEecCCcceEEEEEccC
Q 002278 622 YIVGYGASSTVYKCALK-NSRPIAVKKLYNQYP---HNLREFETELETI-GSIRHRNIVSLHGYALSPYGNLLFYDYMVN 696 (943)
Q Consensus 622 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l-~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 696 (943)
+.||+|+||.||+|... .++.||+|.+..... .....+..|..++ ...+|||++++++++..++..++|+||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 45899999999999975 578999998865432 1223344555544 445899999999999999999999999999
Q ss_pred CChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCCcee
Q 002278 697 GSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHAS 776 (943)
Q Consensus 697 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~~~~ 776 (943)
++|.+++. ....+++..+..++.|++.||.|||+. +++||||+|+||++++++.++|+|||+++.....
T Consensus 82 ~~L~~~l~---~~~~~~~~~~~~i~~qi~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~----- 150 (260)
T cd05611 82 GDCASLIK---TLGGLPEDWAKQYIAEVVLGVEDLHQR---GIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLEN----- 150 (260)
T ss_pred CCHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEeecccceecccc-----
Confidence 99999986 334689999999999999999999998 9999999999999999999999999998754331
Q ss_pred eeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccccCccCHHHH
Q 002278 777 TFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAV 856 (943)
Q Consensus 777 ~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 856 (943)
....|+..|+|||...+..++.++||||+|+++|||++|..||........+...............+ ...
T Consensus 151 ~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~ 221 (260)
T cd05611 151 KKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRINWPEEVKE---------FCS 221 (260)
T ss_pred ccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccCCCCcccc---------cCC
Confidence 22347889999999988889999999999999999999999998665443332222211111111111 122
Q ss_pred HHHHHHHHHccCCCCCCCCCHH---HHHHH
Q 002278 857 RKTFQLALLCTKRYPSERPTMQ---EVARV 883 (943)
Q Consensus 857 ~~l~~l~~~cl~~dP~~RPt~~---el~~~ 883 (943)
..+.+++.+|++.+|++||++. |++.|
T Consensus 222 ~~~~~~i~~~l~~~p~~R~~~~~~~~~l~~ 251 (260)
T cd05611 222 PEAVDLINRLLCMDPAKRLGANGYQEIKSH 251 (260)
T ss_pred HHHHHHHHHHccCCHHHccCCCcHHHHHcC
Confidence 5678999999999999999664 55444
No 353
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=5.1e-33 Score=301.29 Aligned_cols=259 Identities=23% Similarity=0.279 Sum_probs=203.7
Q ss_pred cccceEEeeeceEEEEEEEec-CCceEEEEEecccCc--ccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEEc
Q 002278 618 LSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQYP--HNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYM 694 (943)
Q Consensus 618 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 694 (943)
|+..+.||+|++|.||+|... +++.+|+|++..... .....+.+|+++++.++||||+++++++..++..++++||+
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM 80 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence 566788999999999999975 678899998865432 24567889999999999999999999999999999999999
Q ss_pred cCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCCc
Q 002278 695 VNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPH 774 (943)
Q Consensus 695 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~~ 774 (943)
++ ++.+++... ...+++.++..++.|++.|++|||+. +|+|+||||+||++++++.++|+|||.+....... .
T Consensus 81 ~~-~l~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~-~ 153 (283)
T cd05118 81 DT-DLYKLIKDR--QRGLPESLIKSYLYQLLQGLAFCHSH---GILHRDLKPENLLINTEGVLKLADFGLARSFGSPV-R 153 (283)
T ss_pred CC-CHHHHHHhh--cccCCHHHHHHHHHHHHHHHHHHHHC---CeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCc-c
Confidence 65 888877632 25789999999999999999999999 99999999999999999999999999998765443 1
Q ss_pred eeeeEecccceeCccccccC-CCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCccccc-----
Q 002278 775 ASTFVLGTIGYIDPEYAHTS-RLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSV----- 848 (943)
Q Consensus 775 ~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 848 (943)
......++..|+|||...+. .++.++||||+|+++|+|+||+.||................+.......+.+..
T Consensus 154 ~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (283)
T cd05118 154 PYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNY 233 (283)
T ss_pred cccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhh
Confidence 12224578899999998776 789999999999999999999999987666554433322211111111111100
Q ss_pred ------------CccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002278 849 ------------TCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARV 883 (943)
Q Consensus 849 ------------~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~ 883 (943)
..........+.+++..||++||.+||++.+++.+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~ 280 (283)
T cd05118 234 KFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAH 280 (283)
T ss_pred hhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhC
Confidence 00001234578899999999999999999999876
No 354
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=2.8e-33 Score=302.71 Aligned_cols=249 Identities=22% Similarity=0.315 Sum_probs=204.5
Q ss_pred hccccceEEeeeceEEEEEEEec-CCceEEEEEecccC---cccHHHHHHHHHHHhcCC-CCCcceeeeEEecCCcceEE
Q 002278 616 ENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQY---PHNLREFETELETIGSIR-HRNIVSLHGYALSPYGNLLF 690 (943)
Q Consensus 616 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv 690 (943)
++|...+.||+|+||.||+|..+ +++.||+|.+.... ....+.+.+|++++++++ ||||+++++++..++..++|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 36888899999999999999976 68899999886532 233466888999999998 99999999999999999999
Q ss_pred EEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCC
Q 002278 691 YDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPT 770 (943)
Q Consensus 691 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~ 770 (943)
|||+++++|.+++.. ...+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.++++|||++.....
T Consensus 81 ~e~~~~~~L~~~l~~---~~~l~~~~~~~i~~ql~~~l~~Lh~~---~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~ 154 (280)
T cd05581 81 LEYAPNGELLQYIRK---YGSLDEKCTRFYAAEILLALEYLHSK---GIIHRDLKPENILLDKDMHIKITDFGTAKVLDP 154 (280)
T ss_pred EcCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEecCCccccccCC
Confidence 999999999999963 34799999999999999999999999 999999999999999999999999999987643
Q ss_pred CCC-------------------ceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHH
Q 002278 771 AMP-------------------HASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMS 831 (943)
Q Consensus 771 ~~~-------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~ 831 (943)
... .......|+..|+|||...+..++.++||||+|++++++++|+.||............
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~ 234 (280)
T cd05581 155 NSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQKI 234 (280)
T ss_pred ccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHH
Confidence 321 1222345789999999999888999999999999999999999999876543332222
Q ss_pred hccccccccccCcccccCccCHHHHHHHHHHHHHccCCCCCCCCCH----HHHHHH
Q 002278 832 KADDNTVMEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTM----QEVARV 883 (943)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~----~el~~~ 883 (943)
.......+. .+ ...+.+++..|++.+|++||++ .++++|
T Consensus 235 ~~~~~~~~~----~~---------~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~ 277 (280)
T cd05581 235 LKLEYSFPP----NF---------PPDAKDLIEKLLVLDPQDRLGVNEGYDELKAH 277 (280)
T ss_pred HhcCCCCCC----cc---------CHHHHHHHHHHhcCCHhhCCCcccCHHHHhcC
Confidence 211111111 11 2467799999999999999999 888775
No 355
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=5.7e-33 Score=301.65 Aligned_cols=252 Identities=21% Similarity=0.266 Sum_probs=197.5
Q ss_pred ccccceEEeeeceEEEEEEEec----CCceEEEEEecccC----cccHHHHHHHHHHHhcC-CCCCcceeeeEEecCCcc
Q 002278 617 NLSEKYIVGYGASSTVYKCALK----NSRPIAVKKLYNQY----PHNLREFETELETIGSI-RHRNIVSLHGYALSPYGN 687 (943)
Q Consensus 617 ~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 687 (943)
+|+..+.||+|+||.||+|... +++.||+|.+.... ......+.+|+++++++ +||||+++++.+..+...
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 3677889999999999999853 46789999886432 22345678899999999 599999999999999999
Q ss_pred eEEEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccc
Q 002278 688 LLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARC 767 (943)
Q Consensus 688 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~ 767 (943)
++||||+++|+|.+++. ....+++..+..++.|+++||+|||+. +++||||||+||+++.++.++++|||+++.
T Consensus 81 ~lv~e~~~~~~L~~~~~---~~~~~~~~~~~~~~~ql~~~l~~lH~~---~~~H~dl~p~nil~~~~~~~~l~dfg~~~~ 154 (288)
T cd05583 81 HLILDYVNGGELFTHLY---QREHFTESEVRVYIAEIVLALDHLHQL---GIIYRDIKLENILLDSEGHVVLTDFGLSKE 154 (288)
T ss_pred EEEEecCCCCcHHHHHh---hcCCcCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEEECccccc
Confidence 99999999999999886 334688999999999999999999998 999999999999999999999999999987
Q ss_pred cCCCCCceeeeEecccceeCccccccCC--CCCcchhhhHHHHHHHHHhCCCCCCCCccH---HHHHHHhcccccccccc
Q 002278 768 IPTAMPHASTFVLGTIGYIDPEYAHTSR--LNEKSDVYSFGIVLLEILTGKKAVDNESNL---HQLIMSKADDNTVMEAV 842 (943)
Q Consensus 768 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DvwSlGvil~elltG~~p~~~~~~~---~~~~~~~~~~~~~~~~~ 842 (943)
.............|+..|+|||...+.. .+.++||||||+++|||++|+.||...... ..........
T Consensus 155 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~------- 227 (288)
T cd05583 155 FLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILKS------- 227 (288)
T ss_pred cccccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHcc-------
Confidence 6443332233345899999999987655 788999999999999999999999643221 1111111111
Q ss_pred CcccccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhh
Q 002278 843 DPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLVS 886 (943)
Q Consensus 843 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~ 886 (943)
.+..+.. ....+.+++.+|++.+|++|||+.++.+.+..
T Consensus 228 ~~~~~~~-----~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~ 266 (288)
T cd05583 228 KPPFPKT-----MSAEARDFIQKLLEKDPKKRLGANGADEIKNH 266 (288)
T ss_pred CCCCCcc-----cCHHHHHHHHHHhcCCHhhccCcchHHHHhcC
Confidence 0111111 11356789999999999999998777665543
No 356
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=8.9e-33 Score=307.32 Aligned_cols=256 Identities=25% Similarity=0.282 Sum_probs=195.6
Q ss_pred hhccccceEEeeeceEEEEEEEec-CCceEEEEEecccC--cccHHHHHHHHHHHhcCCCCCcceeeeEEecCC------
Q 002278 615 TENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQY--PHNLREFETELETIGSIRHRNIVSLHGYALSPY------ 685 (943)
Q Consensus 615 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------ 685 (943)
..+|.....||+|+||.||+|... +++.||+|++.... ......+.+|+++++.++||||+++++++....
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 93 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ 93 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence 478999999999999999999975 58899999986532 223456789999999999999999999987543
Q ss_pred cceEEEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccc
Q 002278 686 GNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIA 765 (943)
Q Consensus 686 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla 765 (943)
..++|+||+. +++.++.. ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++
T Consensus 94 ~~~lv~e~~~-~~l~~~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dlkp~NIll~~~~~~kL~dfg~~ 164 (342)
T cd07879 94 DFYLVMPYMQ-TDLQKIMG-----HPLSEDKVQYLVYQMLCGLKYIHSA---GIIHRDLKPGNLAVNEDCELKILDFGLA 164 (342)
T ss_pred eEEEEecccc-cCHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCCCC
Confidence 3589999985 46766542 3588999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCceeeeEecccceeCcccccc-CCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhcccccccccc--
Q 002278 766 RCIPTAMPHASTFVLGTIGYIDPEYAHT-SRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAV-- 842 (943)
Q Consensus 766 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~-- 842 (943)
+...... ....++..|+|||.+.+ ..++.++|||||||++|||++|+.||.+..............+......
T Consensus 165 ~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (342)
T cd07879 165 RHADAEM----TGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQ 240 (342)
T ss_pred cCCCCCC----CCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHH
Confidence 7653321 22357889999999876 4688999999999999999999999987654443332222111000000
Q ss_pred -------------CcccccCcc---CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002278 843 -------------DPEVSVTCV---DLSAVRKTFQLALLCTKRYPSERPTMQEVARV 883 (943)
Q Consensus 843 -------------~~~~~~~~~---~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~ 883 (943)
.+....... .......+.+++.+|++.||++||++.+++.|
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h 297 (342)
T cd07879 241 KLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEH 297 (342)
T ss_pred HhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 000000000 00112457799999999999999999999987
No 357
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=1.3e-32 Score=299.89 Aligned_cols=255 Identities=24% Similarity=0.352 Sum_probs=196.7
Q ss_pred HhhccccceEEeeeceEEEEEEEecC-CceEEEEEecccC-cccHHHHHHHHHHHhcCC-CCCcceeeeEEecCCcceEE
Q 002278 614 STENLSEKYIVGYGASSTVYKCALKN-SRPIAVKKLYNQY-PHNLREFETELETIGSIR-HRNIVSLHGYALSPYGNLLF 690 (943)
Q Consensus 614 ~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv 690 (943)
..++|+..+.||+|+||.||+|.++. ++.||||.+.... ......+..|+.++.+.. ||||+++++++.++...+++
T Consensus 13 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v 92 (296)
T cd06618 13 DLNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFIC 92 (296)
T ss_pred CcchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEE
Confidence 34678889999999999999999875 8899999986543 223455667777776665 99999999999999999999
Q ss_pred EEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhh-CCCCCeEecCCCCccEEECCCCceeecccccccccC
Q 002278 691 YDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHH-DCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIP 769 (943)
Q Consensus 691 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~ 769 (943)
|||+. +++.++... ....+++..+..++.|++.|++|||+ . +|+||||+|+||++++++.+||+|||++..+.
T Consensus 93 ~e~~~-~~l~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~lH~~~---~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~ 166 (296)
T cd06618 93 MELMS-TCLDKLLKR--IQGPIPEDILGKMTVAIVKALHYLKEKH---GVIHRDVKPSNILLDASGNVKLCDFGISGRLV 166 (296)
T ss_pred eeccC-cCHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhhC---CEecCCCcHHHEEEcCCCCEEECccccchhcc
Confidence 99984 577776643 23468999999999999999999997 5 89999999999999999999999999998664
Q ss_pred CCCCceeeeEecccceeCccccccCC----CCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcc
Q 002278 770 TAMPHASTFVLGTIGYIDPEYAHTSR----LNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPE 845 (943)
Q Consensus 770 ~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 845 (943)
..... ....++..|+|||.+.+.. ++.++||||||+++|||++|+.||................. .+.
T Consensus 167 ~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~------~~~ 238 (296)
T cd06618 167 DSKAK--TRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQEE------PPS 238 (296)
T ss_pred CCCcc--cCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHhcCC------CCC
Confidence 33222 2234788999999987654 78899999999999999999999975433222221111111 011
Q ss_pred cccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 002278 846 VSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLV 885 (943)
Q Consensus 846 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~ 885 (943)
..... .....+.+++.+||+.||++||++.+++++.+
T Consensus 239 ~~~~~---~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~ 275 (296)
T cd06618 239 LPPNE---GFSPDFCSFVDLCLTKDHRKRPKYRELLQHPF 275 (296)
T ss_pred CCCCC---CCCHHHHHHHHHHccCChhhCCCHHHHhcChh
Confidence 11000 11246788999999999999999999998855
No 358
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=1.2e-32 Score=306.54 Aligned_cols=265 Identities=23% Similarity=0.260 Sum_probs=201.6
Q ss_pred HHHHHHhhccccceEEeeeceEEEEEEEec-CCceEEEEEecccC--cccHHHHHHHHHHHhcCCCCCcceeeeEEecC-
Q 002278 609 DDIMRSTENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQY--PHNLREFETELETIGSIRHRNIVSLHGYALSP- 684 (943)
Q Consensus 609 ~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~- 684 (943)
.++...+++|+..+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++...
T Consensus 10 ~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~ 89 (345)
T cd07877 10 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPAR 89 (345)
T ss_pred HHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeecc
Confidence 455667899999999999999999999864 68899999986532 22345678899999999999999999988643
Q ss_pred -----CcceEEEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceee
Q 002278 685 -----YGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHL 759 (943)
Q Consensus 685 -----~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl 759 (943)
...+++++++ +++|.+++. ...+++..+..++.|++.|++|||+. +|+||||||+||++++++.+||
T Consensus 90 ~~~~~~~~~lv~~~~-~~~L~~~~~----~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kl 161 (345)
T cd07877 90 SLEEFNDVYLVTHLM-GADLNNIVK----CQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKI 161 (345)
T ss_pred cccccccEEEEehhc-ccCHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEcCCCCEEE
Confidence 2356777775 889988875 23589999999999999999999999 9999999999999999999999
Q ss_pred cccccccccCCCCCceeeeEecccceeCcccccc-CCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhcccccc
Q 002278 760 SDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHT-SRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTV 838 (943)
Q Consensus 760 ~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~ 838 (943)
+|||+++..... .....|+..|+|||+..+ ..++.++||||+||++|||++|+.||...................
T Consensus 162 ~dfg~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~ 237 (345)
T cd07877 162 LDFGLARHTDDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 237 (345)
T ss_pred eccccccccccc----ccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCC
Confidence 999999865332 223457899999998866 568899999999999999999999997655433322221111111
Q ss_pred ccccCcccc---------------cCcc---CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 002278 839 MEAVDPEVS---------------VTCV---DLSAVRKTFQLALLCTKRYPSERPTMQEVARVLV 885 (943)
Q Consensus 839 ~~~~~~~~~---------------~~~~---~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~ 885 (943)
.....+.+. .... .......+.+++..|++.||++||++.+++++-+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~ 302 (345)
T cd07877 238 GAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 302 (345)
T ss_pred CHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcChh
Confidence 000000000 0000 0011245779999999999999999999999864
No 359
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=3.8e-33 Score=298.98 Aligned_cols=244 Identities=23% Similarity=0.280 Sum_probs=196.0
Q ss_pred EeeeceEEEEEEEecC-CceEEEEEecccCc---ccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEEccCCCh
Q 002278 624 VGYGASSTVYKCALKN-SRPIAVKKLYNQYP---HNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSL 699 (943)
Q Consensus 624 lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 699 (943)
||+|+||.||+|+... ++.+|+|.+..... ...+.+.+|++++++++||||+++++.+......+++|||+++++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 5899999999999874 88999998865433 3456788999999999999999999999999999999999999999
Q ss_pred hhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCC------
Q 002278 700 WDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMP------ 773 (943)
Q Consensus 700 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~------ 773 (943)
.+++.. ...+++..+..++.|++.||+|||+. +++||||+|+||++++++.++|+|||++........
T Consensus 81 ~~~l~~---~~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 154 (265)
T cd05579 81 ASLLEN---VGSLDEDVARIYIAEIVLALEYLHSN---GIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDD 154 (265)
T ss_pred HHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHc---CeecCCCCHHHeEEcCCCCEEEEecccchhcccCcccccccc
Confidence 999863 34689999999999999999999999 999999999999999999999999999876533211
Q ss_pred -ceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccccCccC
Q 002278 774 -HASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVD 852 (943)
Q Consensus 774 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 852 (943)
.......++..|+|||...+..++.++||||||+++||+++|+.||.......................
T Consensus 155 ~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~---------- 224 (265)
T cd05579 155 EKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGKIEWPEDV---------- 224 (265)
T ss_pred cccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCcCCCccc----------
Confidence 122334578899999999888899999999999999999999999986654333222222111111100
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 002278 853 LSAVRKTFQLALLCTKRYPSERPTMQEVARVL 884 (943)
Q Consensus 853 ~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L 884 (943)
.....+.+++.+|++.+|++|||+.++.+.+
T Consensus 225 -~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l 255 (265)
T cd05579 225 -EVSDEAIDLISKLLVPDPEKRLGAKSIEEIK 255 (265)
T ss_pred -cCCHHHHHHHHHHhcCCHhhcCCCccHHHHh
Confidence 0125677999999999999999994444433
No 360
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=2.6e-32 Score=291.24 Aligned_cols=251 Identities=23% Similarity=0.326 Sum_probs=205.9
Q ss_pred ccccceEEeeeceEEEEEEEec-CCceEEEEEecccCc--ccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEE
Q 002278 617 NLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQYP--HNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDY 693 (943)
Q Consensus 617 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 693 (943)
+|...+.||+|+||.||++.+. ++..||+|++..... .....+.+|+++++.++|||++++++.+...+..++++||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~ 80 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY 80 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence 4778889999999999999976 578899999865433 4566788999999999999999999999999999999999
Q ss_pred ccCCChhhhccCCC-CCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCC
Q 002278 694 MVNGSLWDLLHGPS-KKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAM 772 (943)
Q Consensus 694 ~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~ 772 (943)
+++++|.+++.... ....+++.++..++.+++.|++|||+. +++|+||+|+||+++.++.++|+|||.+.......
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~---~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~ 157 (258)
T cd08215 81 ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSR---KILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV 157 (258)
T ss_pred cCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHHeEEcCCCcEEECCccceeecccCc
Confidence 99999999986432 136799999999999999999999999 99999999999999999999999999998765443
Q ss_pred CceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccccCccC
Q 002278 773 PHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVD 852 (943)
Q Consensus 773 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 852 (943)
. ......|++.|+|||...+..++.++|+||+|+++|+|++|+.||................ . +.++.
T Consensus 158 ~-~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~---~----~~~~~---- 225 (258)
T cd08215 158 D-LAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILKGQ---Y----PPIPS---- 225 (258)
T ss_pred c-eecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHhcCC---C----CCCCC----
Confidence 2 2233468899999999988889999999999999999999999997655322222111111 1 11111
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002278 853 LSAVRKTFQLALLCTKRYPSERPTMQEVARV 883 (943)
Q Consensus 853 ~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~ 883 (943)
.....+.+++..|+..+|++|||+.+++++
T Consensus 226 -~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 255 (258)
T cd08215 226 -QYSSELRNLVSSLLQKDPEERPSIAQILQS 255 (258)
T ss_pred -CCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 112467789999999999999999999876
No 361
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=6.6e-33 Score=307.83 Aligned_cols=261 Identities=22% Similarity=0.278 Sum_probs=199.5
Q ss_pred hhccccceEEeeeceEEEEEEEec-CCceEEEEEecccC--cccHHHHHHHHHHHhcCCCCCcceeeeEEecCC-----c
Q 002278 615 TENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQY--PHNLREFETELETIGSIRHRNIVSLHGYALSPY-----G 686 (943)
Q Consensus 615 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~ 686 (943)
.++|...+.||+|+||+||+|... +++.||+|++.... ......+.+|+.+++.++||||+++++++.... .
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 83 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND 83 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence 457889999999999999999975 57899999986532 233456778999999999999999999886542 4
Q ss_pred ceEEEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeeccccccc
Q 002278 687 NLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIAR 766 (943)
Q Consensus 687 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~ 766 (943)
.++||||+. ++|.+++. ....+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||+++
T Consensus 84 ~~lv~e~~~-~~L~~~~~---~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~ 156 (337)
T cd07858 84 VYIVYELMD-TDLHQIIR---SSQTLSDDHCQYFLYQLLRGLKYIHSA---NVLHRDLKPSNLLLNANCDLKICDFGLAR 156 (337)
T ss_pred EEEEEeCCC-CCHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECcCcccc
Confidence 799999995 78888886 345689999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCceeeeEecccceeCcccccc-CCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccc-c----
Q 002278 767 CIPTAMPHASTFVLGTIGYIDPEYAHT-SRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVM-E---- 840 (943)
Q Consensus 767 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~-~---- 840 (943)
....... ......++..|+|||.+.+ ..++.++|||||||++|+|++|+.||.+..............+... +
T Consensus 157 ~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (337)
T cd07858 157 TTSEKGD-FMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGF 235 (337)
T ss_pred ccCCCcc-cccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhh
Confidence 7643321 1223457889999998765 4688999999999999999999999976543322221111100000 0
Q ss_pred ---------------ccCcccccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 002278 841 ---------------AVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLV 885 (943)
Q Consensus 841 ---------------~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~ 885 (943)
..++..... .......+.+++.+|++.+|++|||+.++++|-+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~ 293 (337)
T cd07858 236 IRNEKARRYIRSLPYTPRQSFARL--FPHANPLAIDLLEKMLVFDPSKRITVEEALAHPY 293 (337)
T ss_pred cCchhhhHHHHhcCcccccCHHHH--cccCCHHHHHHHHHHhcCChhhccCHHHHHcCcc
Confidence 000000000 0012356789999999999999999999999843
No 362
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=1.7e-32 Score=303.51 Aligned_cols=258 Identities=22% Similarity=0.263 Sum_probs=194.4
Q ss_pred EEeee--ceEEEEEEEec-CCceEEEEEecccC--cccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEEccCC
Q 002278 623 IVGYG--ASSTVYKCALK-NSRPIAVKKLYNQY--PHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNG 697 (943)
Q Consensus 623 ~lG~G--~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 697 (943)
.||+| +||+||.|.+. .++.||+|.+.... ....+.+.+|+.+++.++||||+++++++..++..++||||+.+|
T Consensus 5 ~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~~ 84 (328)
T cd08226 5 EIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAYG 84 (328)
T ss_pred HhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccCC
Confidence 35555 99999999975 68999999886432 233467889999999999999999999999999999999999999
Q ss_pred ChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCCce--
Q 002278 698 SLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHA-- 775 (943)
Q Consensus 698 ~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~~~-- 775 (943)
++.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++++|||.+..........
T Consensus 85 ~l~~~l~~~~-~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (328)
T cd08226 85 SANSLLKTYF-PEGMSEALIGNILFGALRGLNYLHQN---GYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKV 160 (328)
T ss_pred CHHHHHHhhc-ccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccccc
Confidence 9999886432 23588999999999999999999998 99999999999999999999999998654332111110
Q ss_pred ----eeeEecccceeCccccccC--CCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhcccccccc---------
Q 002278 776 ----STFVLGTIGYIDPEYAHTS--RLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVME--------- 840 (943)
Q Consensus 776 ----~~~~~gt~~y~aPE~~~~~--~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~--------- 840 (943)
.....++..|+|||++.+. .++.++||||+||++|||++|+.||...................+.
T Consensus 161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (328)
T cd08226 161 VYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEE 240 (328)
T ss_pred cccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccchhh
Confidence 1112356679999998763 4789999999999999999999999866543333322221110000
Q ss_pred --------------------------ccCcccccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 002278 841 --------------------------AVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLV 885 (943)
Q Consensus 841 --------------------------~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~ 885 (943)
....... ..........+.+++++||..||++|||+.+++++-+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~ 310 (328)
T cd08226 241 SRMKNSQSGVDSGIGESVVAAGMTQTMTSERLR-TPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAF 310 (328)
T ss_pred hhhccchhhhhcccccchhcccccccccccccc-chhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHH
Confidence 0000000 0001123457889999999999999999999998765
No 363
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=5.7e-34 Score=281.02 Aligned_cols=251 Identities=24% Similarity=0.282 Sum_probs=195.7
Q ss_pred hhccccc-eEEeeeceEEEEEEEec-CCceEEEEEecccCcccHHHHHHHHHHHhc-CCCCCcceeeeEEecC----Ccc
Q 002278 615 TENLSEK-YIVGYGASSTVYKCALK-NSRPIAVKKLYNQYPHNLREFETELETIGS-IRHRNIVSLHGYALSP----YGN 687 (943)
Q Consensus 615 ~~~~~~~-~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~-l~h~niv~l~~~~~~~----~~~ 687 (943)
+++|++. .+||-|-.|.|..+..+ .++++|+|++... ...++|++.--. -.|||||.++++|... ...
T Consensus 60 tedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds-----~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcL 134 (400)
T KOG0604|consen 60 TEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS-----PKARREVELHWMASGHPHIVSIIDVYENSYQGRKCL 134 (400)
T ss_pred hhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC-----HHHHhHhhhhhhhcCCCceEEeehhhhhhccCceee
Confidence 4445443 46899999999999976 5789999998654 556778877443 3699999999998653 346
Q ss_pred eEEEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEEC---CCCceeeccccc
Q 002278 688 LLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILID---ENFDAHLSDFGI 764 (943)
Q Consensus 688 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~---~~~~~kl~DFGl 764 (943)
.+|||.++||.|+..++.. ....+.+.++..|+.||+.|++|||+. +|+||||||+|+|.+ .+..+||+|||+
T Consensus 135 LiVmE~meGGeLfsriq~~-g~~afTErea~eI~~qI~~Av~~lH~~---nIAHRDlKpENLLyt~t~~na~lKLtDfGF 210 (400)
T KOG0604|consen 135 LIVMECMEGGELFSRIQDR-GDQAFTEREASEIMKQIGLAVRYLHSM---NIAHRDLKPENLLYTTTSPNAPLKLTDFGF 210 (400)
T ss_pred EeeeecccchHHHHHHHHc-ccccchHHHHHHHHHHHHHHHHHHHhc---chhhccCChhheeeecCCCCcceEeccccc
Confidence 7899999999999999754 345699999999999999999999999 999999999999996 455699999999
Q ss_pred ccccCCCCCceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHH----HHHHHhcccccccc
Q 002278 765 ARCIPTAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLH----QLIMSKADDNTVME 840 (943)
Q Consensus 765 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~----~~~~~~~~~~~~~~ 840 (943)
|+..... ......+-|+.|.|||++...+|+...|+||+||++|-|+.|.+||.+..... ...++......+++
T Consensus 211 AK~t~~~--~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy~FP~ 288 (400)
T KOG0604|consen 211 AKETQEP--GDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQYEFPE 288 (400)
T ss_pred ccccCCC--ccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccCccCCC
Confidence 9965432 22233457999999999999999999999999999999999999998654311 11111122222222
Q ss_pred ccCcccccCccCHHHH-HHHHHHHHHccCCCCCCCCCHHHHHHHHhh
Q 002278 841 AVDPEVSVTCVDLSAV-RKTFQLALLCTKRYPSERPTMQEVARVLVS 886 (943)
Q Consensus 841 ~~~~~~~~~~~~~~~~-~~l~~l~~~cl~~dP~~RPt~~el~~~L~~ 886 (943)
+++.++ +..-++|+.+++.+|.+|.|..++++|-|-
T Consensus 289 ----------pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~hpwi 325 (400)
T KOG0604|consen 289 ----------PEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDHPWI 325 (400)
T ss_pred ----------hhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcCchh
Confidence 222222 344579999999999999999999998764
No 364
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=1.4e-32 Score=296.59 Aligned_cols=242 Identities=23% Similarity=0.259 Sum_probs=187.8
Q ss_pred EEeeeceEEEEEEEec-CCceEEEEEecccCc---ccHHHHHHHH---HHHhcCCCCCcceeeeEEecCCcceEEEEEcc
Q 002278 623 IVGYGASSTVYKCALK-NSRPIAVKKLYNQYP---HNLREFETEL---ETIGSIRHRNIVSLHGYALSPYGNLLFYDYMV 695 (943)
Q Consensus 623 ~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~---~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 695 (943)
+||+|+||.||+|... .++.||+|.+..... .....+..|. +.++...||+|+.+++++.+.+..++||||++
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 3899999999999875 578999998865321 1112233343 34445679999999999999999999999999
Q ss_pred CCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCCce
Q 002278 696 NGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHA 775 (943)
Q Consensus 696 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~~~ 775 (943)
+|+|.+++. ....+++..+..++.|++.|++|||+. +|+||||||+||+++.++.++|+|||+++.......
T Consensus 81 g~~L~~~l~---~~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~~-- 152 (278)
T cd05606 81 GGDLHYHLS---QHGVFSEAEMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP-- 152 (278)
T ss_pred CCcHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCCCCHHHEEECCCCCEEEccCcCccccCccCC--
Confidence 999999886 345699999999999999999999998 999999999999999999999999999976543322
Q ss_pred eeeEecccceeCccccccC-CCCCcchhhhHHHHHHHHHhCCCCCCCCccH--HHHHHHhccccccccccCcccccCccC
Q 002278 776 STFVLGTIGYIDPEYAHTS-RLNEKSDVYSFGIVLLEILTGKKAVDNESNL--HQLIMSKADDNTVMEAVDPEVSVTCVD 852 (943)
Q Consensus 776 ~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvil~elltG~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 852 (943)
....|+..|+|||++.++ .++.++||||+||++|||++|+.||...... ........ ...+.++..
T Consensus 153 -~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~-------~~~~~~~~~--- 221 (278)
T cd05606 153 -HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTL-------TMAVELPDS--- 221 (278)
T ss_pred -cCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhh-------ccCCCCCCc---
Confidence 223589999999998754 6899999999999999999999999765221 11111110 011111111
Q ss_pred HHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHHHh
Q 002278 853 LSAVRKTFQLALLCTKRYPSERP-----TMQEVARVLV 885 (943)
Q Consensus 853 ~~~~~~l~~l~~~cl~~dP~~RP-----t~~el~~~L~ 885 (943)
....+.+++.+|+..+|++|| ++.+++++-+
T Consensus 222 --~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~~~ 257 (278)
T cd05606 222 --FSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEHPF 257 (278)
T ss_pred --CCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhCcc
Confidence 124677899999999999999 9999987643
No 365
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.9e-35 Score=281.33 Aligned_cols=273 Identities=22% Similarity=0.291 Sum_probs=216.2
Q ss_pred HhhccccceEEeeeceEEEEEEEec-CCceEEEEEecccC--cccHHHHHHHHHHHhcCCCCCcceeeeEEecC------
Q 002278 614 STENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQY--PHNLREFETELETIGSIRHRNIVSLHGYALSP------ 684 (943)
Q Consensus 614 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------ 684 (943)
....|.....||+|.||.||+|+.+ .+++||+|++.-.. ........+|+++++.++|+|++.++..|...
T Consensus 15 ~~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r 94 (376)
T KOG0669|consen 15 EVSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNR 94 (376)
T ss_pred cchHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCccc
Confidence 4556777888999999999999976 47889999874322 23345678899999999999999998887432
Q ss_pred --CcceEEEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeeccc
Q 002278 685 --YGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDF 762 (943)
Q Consensus 685 --~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DF 762 (943)
...|+||.+|+. +|..++.. ...+++..++.++..++..||.|+|+. .|+|||+||.|++++.+|.+||+||
T Consensus 95 ~r~t~ylVf~~ceh-DLaGlLsn--~~vr~sls~Ikk~Mk~Lm~GL~~iHr~---kilHRDmKaaNvLIt~dgilklADF 168 (376)
T KOG0669|consen 95 DRATFYLVFDFCEH-DLAGLLSN--RKVRFSLSEIKKVMKGLMNGLYYIHRN---KILHRDMKAANVLITKDGILKLADF 168 (376)
T ss_pred ccceeeeeHHHhhh-hHHHHhcC--ccccccHHHHHHHHHHHHHHHHHHHHh---hHHhhcccHhhEEEcCCceEEeecc
Confidence 236899999854 78888863 335799999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCCC---ceeeeEecccceeCccccccC-CCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhcccccc
Q 002278 763 GIARCIPTAMP---HASTFVLGTIGYIDPEYAHTS-RLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTV 838 (943)
Q Consensus 763 Gla~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~ 838 (943)
|+|+.+..... ...+..+-|.+|++||.+.|. .|+++.|||+.||++.||+||.+-+.+.....++..+..-.+..
T Consensus 169 Glar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~ 248 (376)
T KOG0669|consen 169 GLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSI 248 (376)
T ss_pred ccccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccC
Confidence 99977643221 123334569999999988874 69999999999999999999999999998888887777777776
Q ss_pred ccccCcccccCc----------------------cCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcCCCCC
Q 002278 839 MEAVDPEVSVTC----------------------VDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLVSLLPAPP 892 (943)
Q Consensus 839 ~~~~~~~~~~~~----------------------~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~~~~~~~ 892 (943)
...++|.+.... ..........+++..++..||.+|+++++++.|-+-...+.+
T Consensus 249 tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~F~kdp~p 324 (376)
T KOG0669|consen 249 TKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHDFFWKDPMP 324 (376)
T ss_pred CcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchhhhhcCCcc
Confidence 666666543110 000011245688999999999999999999998776555443
No 366
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=1.7e-32 Score=301.91 Aligned_cols=257 Identities=21% Similarity=0.214 Sum_probs=192.3
Q ss_pred EeeeceEEEEEEEecCCceEEEEEeccc--CcccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEEccCCChhh
Q 002278 624 VGYGASSTVYKCALKNSRPIAVKKLYNQ--YPHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWD 701 (943)
Q Consensus 624 lG~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~ 701 (943)
+|.|+++.||++.. +++.||+|++... .......+.+|+++++.++||||+++++++.+.+..+++|||+++|+|.+
T Consensus 10 ~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~ 88 (314)
T cd08216 10 FEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSCED 88 (314)
T ss_pred hcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCHHH
Confidence 44455555555444 5889999998654 34456789999999999999999999999999999999999999999999
Q ss_pred hccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCC------ce
Q 002278 702 LLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMP------HA 775 (943)
Q Consensus 702 ~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~------~~ 775 (943)
++.... ...+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+|++|||.+..+..... ..
T Consensus 89 ~l~~~~-~~~~~~~~~~~~~~~l~~~L~~LH~~---~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~ 164 (314)
T cd08216 89 LLKTHF-PEGLPELAIAFILKDVLNALDYIHSK---GFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDF 164 (314)
T ss_pred HHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCcceEEEecCCceEEecCccceeeccccccccccccc
Confidence 987432 24588999999999999999999999 999999999999999999999999999875532211 01
Q ss_pred eeeEecccceeCcccccc--CCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccc-------ccc------
Q 002278 776 STFVLGTIGYIDPEYAHT--SRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNT-------VME------ 840 (943)
Q Consensus 776 ~~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~-------~~~------ 840 (943)
.....++..|+|||++.+ ..++.++||||+||++|||++|+.||.................. ...
T Consensus 165 ~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (314)
T cd08216 165 PKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYEDSMS 244 (314)
T ss_pred cccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhhcCCcC
Confidence 122346788999999876 35889999999999999999999999866544433222111100 000
Q ss_pred -----ccCcccc---cCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 002278 841 -----AVDPEVS---VTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLV 885 (943)
Q Consensus 841 -----~~~~~~~---~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~ 885 (943)
...+... ...........+.+++..||..||++|||+++++++-+
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~ 297 (314)
T cd08216 245 QSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHSF 297 (314)
T ss_pred cccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCch
Confidence 0000000 00001122346778999999999999999999999755
No 367
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=1.3e-32 Score=306.08 Aligned_cols=259 Identities=24% Similarity=0.288 Sum_probs=199.4
Q ss_pred HhhccccceEEeeeceEEEEEEEec-CCceEEEEEecccC--cccHHHHHHHHHHHhcCCCCCcceeeeEEecCC-----
Q 002278 614 STENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQY--PHNLREFETELETIGSIRHRNIVSLHGYALSPY----- 685 (943)
Q Consensus 614 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----- 685 (943)
..++|+..+.||+|+||.||+|... ++..||||++.... ......+.+|+++++.++||||+++++++..+.
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07880 13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRF 92 (343)
T ss_pred cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccccc
Confidence 5678999999999999999999865 68899999985432 223456789999999999999999999987654
Q ss_pred -cceEEEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeeccccc
Q 002278 686 -GNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGI 764 (943)
Q Consensus 686 -~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGl 764 (943)
..++||||+ +++|.+++. ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++.++++|||+
T Consensus 93 ~~~~lv~e~~-~~~l~~~~~----~~~l~~~~~~~i~~qi~~al~~LH~~---gi~H~dlkp~Nill~~~~~~kl~dfg~ 164 (343)
T cd07880 93 HDFYLVMPFM-GTDLGKLMK----HEKLSEDRIQFLVYQMLKGLKYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGL 164 (343)
T ss_pred ceEEEEEecC-CCCHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeeccc
Confidence 348999998 789988875 24689999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCceeeeEecccceeCcccccc-CCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccC
Q 002278 765 ARCIPTAMPHASTFVLGTIGYIDPEYAHT-SRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVD 843 (943)
Q Consensus 765 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 843 (943)
+....... ....+++.|+|||.+.+ ..++.++|+||+||++|++++|+.||......................+.
T Consensus 165 ~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 240 (343)
T cd07880 165 ARQTDSEM----TGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFV 240 (343)
T ss_pred ccccccCc----cccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHH
Confidence 98654321 22347889999998876 45889999999999999999999999876554433332221111110000
Q ss_pred c---------------ccccC-c--cCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 002278 844 P---------------EVSVT-C--VDLSAVRKTFQLALLCTKRYPSERPTMQEVARVL 884 (943)
Q Consensus 844 ~---------------~~~~~-~--~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L 884 (943)
. ..... . ........+.+++.+|++.||++|||+.+++++-
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~ 299 (343)
T cd07880 241 QKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHP 299 (343)
T ss_pred HhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCc
Confidence 0 00000 0 0001123577899999999999999999999764
No 368
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=7.3e-34 Score=298.58 Aligned_cols=247 Identities=22% Similarity=0.297 Sum_probs=204.2
Q ss_pred ceEEeeeceEEEEEEEec-CCceEEEEEecccC--cccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEEccCC
Q 002278 621 KYIVGYGASSTVYKCALK-NSRPIAVKKLYNQY--PHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNG 697 (943)
Q Consensus 621 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 697 (943)
.+++|+|.||+||-|.++ .|+.||||++.+.. ......+++|+++++.+.||.||.+.-.|+..+..++|||-+.|.
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~GD 648 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHGD 648 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcch
Confidence 468999999999999976 68999999996543 344578899999999999999999999999999999999999665
Q ss_pred ChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCC---CceeecccccccccCCCCCc
Q 002278 698 SLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDEN---FDAHLSDFGIARCIPTAMPH 774 (943)
Q Consensus 698 ~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~---~~~kl~DFGla~~~~~~~~~ 774 (943)
-|.-++. ...+++++.....++.||+.||.|||.+ +|||.||||+|||+.+. .++||||||+|+..+.. .
T Consensus 649 MLEMILS--sEkgRL~er~TkFlvtQIL~ALr~LH~k---nIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEk--s 721 (888)
T KOG4236|consen 649 MLEMILS--SEKGRLPERITKFLVTQILVALRYLHFK---NIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEK--S 721 (888)
T ss_pred HHHHHHH--hhcccchHHHHHHHHHHHHHHHHHhhhc---ceeeccCCchheeeccCCCCCceeeccccceeecchh--h
Confidence 5555554 2567899999999999999999999999 99999999999999643 46999999999998654 2
Q ss_pred eeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccccCccCHH
Q 002278 775 ASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLS 854 (943)
Q Consensus 775 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 854 (943)
.+..++||+.|.|||++..+.|+..-|+||.||++|--++|..||..+.++...+.... ..++..-|.++.
T Consensus 722 FRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdIndQIQNAa--FMyPp~PW~eis------- 792 (888)
T KOG4236|consen 722 FRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDINDQIQNAA--FMYPPNPWSEIS------- 792 (888)
T ss_pred hhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccchhHHhhccc--cccCCCchhhcC-------
Confidence 33446799999999999999999999999999999999999999988777665544322 122223333333
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 002278 855 AVRKTFQLALLCTKRYPSERPTMQEVARVLV 885 (943)
Q Consensus 855 ~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~ 885 (943)
...+++|...++..-.+|.+.+..+.|.|
T Consensus 793 --~~AidlIn~LLqVkm~kRysvdk~lsh~W 821 (888)
T KOG4236|consen 793 --PEAIDLINNLLQVKMRKRYSVDKSLSHPW 821 (888)
T ss_pred --HHHHHHHHHHHHHHHHHhcchHhhccchh
Confidence 34568888889988999999988877765
No 369
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=1.3e-32 Score=293.33 Aligned_cols=249 Identities=22% Similarity=0.291 Sum_probs=203.6
Q ss_pred ccccceEEeeeceEEEEEEEec-CCceEEEEEecccC--cccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEE
Q 002278 617 NLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQY--PHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDY 693 (943)
Q Consensus 617 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 693 (943)
+|+..+.||+|+||.||++..+ +++.+|+|++.... .....++.+|+++++.++||||+++++++.+....++||||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY 80 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence 4778889999999999999865 57889999986532 33455678899999999999999999999999999999999
Q ss_pred ccCCChhhhccCCC-CCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCC
Q 002278 694 MVNGSLWDLLHGPS-KKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAM 772 (943)
Q Consensus 694 ~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~ 772 (943)
+++++|.+++.... ....+++..+..++.|++.|++|||+. +++||||+|+||++++++.+|++|||+++......
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~---~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~~ 157 (256)
T cd08530 81 APFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQ---KILHRDLKSANILLVANDLVKIGDLGISKVLKKNM 157 (256)
T ss_pred cCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEEecCCcEEEeeccchhhhccCC
Confidence 99999999885321 235689999999999999999999999 99999999999999999999999999998765441
Q ss_pred CceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccccCccC
Q 002278 773 PHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVD 852 (943)
Q Consensus 773 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 852 (943)
.....|++.|+|||...+..++.++|+||+|+++|||++|+.||...+.......... ... +...
T Consensus 158 ---~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~--~~~-----~~~~----- 222 (256)
T cd08530 158 ---AKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQR--GKY-----PPIP----- 222 (256)
T ss_pred ---cccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc--CCC-----CCCc-----
Confidence 1224588999999999998899999999999999999999999986654322221111 111 1111
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002278 853 LSAVRKTFQLALLCTKRYPSERPTMQEVARV 883 (943)
Q Consensus 853 ~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~ 883 (943)
......+.+++..|++.+|++||++.+++++
T Consensus 223 ~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 253 (256)
T cd08530 223 PIYSQDLQNFIRSMLQVKPKLRPNCDKILAS 253 (256)
T ss_pred hhhCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 1223567899999999999999999999876
No 370
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=2.9e-32 Score=298.72 Aligned_cols=252 Identities=28% Similarity=0.388 Sum_probs=199.4
Q ss_pred hhccccceEEeeeceEEEEEEEec-CCceEEEEEeccc---CcccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEE
Q 002278 615 TENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQ---YPHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLF 690 (943)
Q Consensus 615 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 690 (943)
.+.|+..+.||+|+||.||+|..+ ++..+|+|.+... ......++.+|+++++.++|+|++++++++......++|
T Consensus 14 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 93 (308)
T cd06634 14 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLV 93 (308)
T ss_pred HHHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEE
Confidence 344777788999999999999976 4678999988532 223345678899999999999999999999999999999
Q ss_pred EEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCC
Q 002278 691 YDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPT 770 (943)
Q Consensus 691 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~ 770 (943)
|||+. |++.+++.. ....+++.++..++.|++.|+.|||+. +++||||||+||+++.++.++++|||++.....
T Consensus 94 ~e~~~-~~l~~~~~~--~~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~ 167 (308)
T cd06634 94 MEYCL-GSASDLLEV--HKKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP 167 (308)
T ss_pred EEccC-CCHHHHHHH--cCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHhEEECCCCcEEECCcccceeecC
Confidence 99996 678777642 234588999999999999999999999 999999999999999999999999999876543
Q ss_pred CCCceeeeEecccceeCccccc---cCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccc
Q 002278 771 AMPHASTFVLGTIGYIDPEYAH---TSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVS 847 (943)
Q Consensus 771 ~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 847 (943)
. ....|++.|+|||++. ...++.++|||||||++|||++|+.||................. +...
T Consensus 168 ~-----~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~-------~~~~ 235 (308)
T cd06634 168 A-----NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNES-------PALQ 235 (308)
T ss_pred c-----ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHHhhcCC-------CCcC
Confidence 2 2235788999999875 34678899999999999999999999976544332222211111 1111
Q ss_pred cCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcC
Q 002278 848 VTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLVSLL 888 (943)
Q Consensus 848 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~~~ 888 (943)
.......+.+++.+||+.+|++||++.+++++.+...
T Consensus 236 ----~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~~~ 272 (308)
T cd06634 236 ----SGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLR 272 (308)
T ss_pred ----cccccHHHHHHHHHHhhCCcccCCCHHHHhhCccccc
Confidence 0112245778999999999999999999999876544
No 371
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-33 Score=287.69 Aligned_cols=242 Identities=20% Similarity=0.267 Sum_probs=201.0
Q ss_pred HhhccccceEEeeeceEEEEEEEecC-CceEEEEEecccC---cccHHHHHHHHHHHhcCC-CCCcceeeeEEecCCcce
Q 002278 614 STENLSEKYIVGYGASSTVYKCALKN-SRPIAVKKLYNQY---PHNLREFETELETIGSIR-HRNIVSLHGYALSPYGNL 688 (943)
Q Consensus 614 ~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~ 688 (943)
....|....+||+|+||.|.+|..+. .+.+|||++++.. ....+--..|-++|+... -|.++.++..|+.-+..|
T Consensus 347 ~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLy 426 (683)
T KOG0696|consen 347 KATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLY 426 (683)
T ss_pred eecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhhee
Confidence 44568888999999999999998774 5678999887653 223344456777777664 689999999999999999
Q ss_pred EEEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeeccccccccc
Q 002278 689 LFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCI 768 (943)
Q Consensus 689 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~ 768 (943)
+||||+.||+|..+++ +.+++.++.+.-+|..||-||-+||++ ||++||||..|||+|.+|++||+|||+++.-
T Consensus 427 FVMEyvnGGDLMyhiQ---Q~GkFKEp~AvFYAaEiaigLFFLh~k---gIiYRDLKLDNvmLd~eGHiKi~DFGmcKEn 500 (683)
T KOG0696|consen 427 FVMEYVNGGDLMYHIQ---QVGKFKEPVAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKEN 500 (683)
T ss_pred eEEEEecCchhhhHHH---HhcccCCchhhhhhHHHHHHhhhhhcC---CeeeeeccccceEeccCCceEeeeccccccc
Confidence 9999999999999997 567788999999999999999999999 9999999999999999999999999999743
Q ss_pred CCCCCceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCccccc
Q 002278 769 PTAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSV 848 (943)
Q Consensus 769 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 848 (943)
-.. ...+...+|||.|+|||++...+|+..+|.||+||+||||+.|++||++++..+....+.......+..+.
T Consensus 501 i~~-~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~ehnvsyPKslS----- 574 (683)
T KOG0696|consen 501 IFD-GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEHNVSYPKSLS----- 574 (683)
T ss_pred ccC-CcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHccCcCccccc-----
Confidence 222 23344578999999999999999999999999999999999999999998876666555555444443322
Q ss_pred CccCHHHHHHHHHHHHHccCCCCCCCC
Q 002278 849 TCVDLSAVRKTFQLALLCTKRYPSERP 875 (943)
Q Consensus 849 ~~~~~~~~~~l~~l~~~cl~~dP~~RP 875 (943)
.+...+.+..+.+.|.+|-
T Consensus 575 --------kEAv~ickg~ltK~P~kRL 593 (683)
T KOG0696|consen 575 --------KEAVAICKGLLTKHPGKRL 593 (683)
T ss_pred --------HHHHHHHHHHhhcCCcccc
Confidence 3445788888999999985
No 372
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=3.6e-32 Score=295.30 Aligned_cols=259 Identities=25% Similarity=0.252 Sum_probs=197.2
Q ss_pred cccceEEeeeceEEEEEEEecC-CceEEEEEecccCc--ccHHHHHHHHHHHhcC---CCCCcceeeeEEecCCc-----
Q 002278 618 LSEKYIVGYGASSTVYKCALKN-SRPIAVKKLYNQYP--HNLREFETELETIGSI---RHRNIVSLHGYALSPYG----- 686 (943)
Q Consensus 618 ~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~~~~----- 686 (943)
|+..+.||+|+||.||+|+++. ++.||+|++..... .....+.+|+.+++++ +||||+++++++...+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 5677899999999999999874 88999999864332 2234566777776655 59999999999988776
Q ss_pred ceEEEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeeccccccc
Q 002278 687 NLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIAR 766 (943)
Q Consensus 687 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~ 766 (943)
.+++|||+. ++|.+++.... ...+++..+..++.|++.||+|||+. +++|+||+|+||++++++.+||+|||.+.
T Consensus 81 ~~l~~e~~~-~~l~~~l~~~~-~~~l~~~~~~~~~~~i~~al~~LH~~---~i~h~~l~~~nili~~~~~~~l~dfg~~~ 155 (287)
T cd07838 81 LTLVFEHVD-QDLATYLSKCP-KPGLPPETIKDLMRQLLRGVDFLHSH---RIVHRDLKPQNILVTSDGQVKIADFGLAR 155 (287)
T ss_pred eEEEehhcc-cCHHHHHHHcc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhEEEccCCCEEEeccCcce
Confidence 899999996 58888876422 23589999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhcccccccc------
Q 002278 767 CIPTAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVME------ 840 (943)
Q Consensus 767 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~------ 840 (943)
.+...... ....++..|+|||++.+..++.++|||||||++|||++|++||.....................
T Consensus 156 ~~~~~~~~--~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (287)
T cd07838 156 IYSFEMAL--TSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRN 233 (287)
T ss_pred eccCCccc--ccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCC
Confidence 76433221 2234788999999999999999999999999999999999999876654443332221110000
Q ss_pred ------ccCcccccCc--cCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002278 841 ------AVDPEVSVTC--VDLSAVRKTFQLALLCTKRYPSERPTMQEVARV 883 (943)
Q Consensus 841 ------~~~~~~~~~~--~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~ 883 (943)
.......... ........+.+++.+||+.||++||++.+++.+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~ 284 (287)
T cd07838 234 VSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQH 284 (287)
T ss_pred cccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcC
Confidence 0000000000 001223566789999999999999999999876
No 373
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=1.5e-32 Score=302.03 Aligned_cols=261 Identities=24% Similarity=0.276 Sum_probs=197.3
Q ss_pred hhccccceEEeeeceEEEEEEEec-CCceEEEEEecccCc--ccHHHHHHHHHHHhcCCCCCcceeeeEEecCC------
Q 002278 615 TENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQYP--HNLREFETELETIGSIRHRNIVSLHGYALSPY------ 685 (943)
Q Consensus 615 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------ 685 (943)
.++|+..+.||+|+||.||+|.++ +++.||+|++..... .....+.+|+++++.++||||+++++++.+..
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 578999999999999999999976 578999998864432 22346778999999999999999999876544
Q ss_pred --cceEEEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccc
Q 002278 686 --GNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFG 763 (943)
Q Consensus 686 --~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFG 763 (943)
..++||||+.+ ++.+.+.. ....+++.++..++.|+++||+|||+. +|+||||||+||++++++.++|+|||
T Consensus 87 ~~~~~lv~~~~~~-~l~~~~~~--~~~~~~~~~~~~i~~~l~~al~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg 160 (311)
T cd07866 87 RGSVYMVTPYMDH-DLSGLLEN--PSVKLTESQIKCYMLQLLEGINYLHEN---HILHRDIKAANILIDNQGILKIADFG 160 (311)
T ss_pred CceEEEEEecCCc-CHHHHHhc--cccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECcCc
Confidence 35899999864 67666653 234699999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCc----------eeeeEecccceeCccccccC-CCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHh
Q 002278 764 IARCIPTAMPH----------ASTFVLGTIGYIDPEYAHTS-RLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSK 832 (943)
Q Consensus 764 la~~~~~~~~~----------~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~ 832 (943)
+++........ ..+...|++.|+|||.+.+. .++.++|||||||++|||++|++||.+...........
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~ 240 (311)
T cd07866 161 LARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIF 240 (311)
T ss_pred cchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 99865432211 11234578899999987654 58899999999999999999999998665544332221
Q ss_pred cccccccc-------------------ccCcccccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002278 833 ADDNTVME-------------------AVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARV 883 (943)
Q Consensus 833 ~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~ 883 (943)
.......+ ...+...... ......+.+++.+|++.||++|||+.+++.+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~ 308 (311)
T cd07866 241 KLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERF--GKLGPEGLDLLSKLLSLDPYKRLTASDALEH 308 (311)
T ss_pred HHhCCCChhhchhhhhcccccccccCCCCCccHHHHc--ccCChhHHHHHHHHcccCcccCcCHHHHhcC
Confidence 11110000 0000000000 0112467799999999999999999999876
No 374
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=1.3e-32 Score=306.14 Aligned_cols=262 Identities=22% Similarity=0.308 Sum_probs=197.8
Q ss_pred hccccceEEeeeceEEEEEEEec-CCceEEEEEecccCcccHHHHHHHHHHHhcCCCCCcceeeeEEecC----------
Q 002278 616 ENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYALSP---------- 684 (943)
Q Consensus 616 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~---------- 684 (943)
.+|...+.||+|+||.||+|..+ .++.||+|++........+.+.+|+++++.++||||+++++++...
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 84 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGS 84 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccccc
Confidence 67889999999999999999976 5789999998766666667788999999999999999999876554
Q ss_pred ----CcceEEEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEEC-CCCceee
Q 002278 685 ----YGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILID-ENFDAHL 759 (943)
Q Consensus 685 ----~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~-~~~~~kl 759 (943)
...++||||++ ++|.+++. ...+++..+..++.|++.||+|||+. +|+||||||+||+++ +++.+|+
T Consensus 85 ~~~~~~~~lv~e~~~-~~L~~~~~----~~~l~~~~~~~~~~qi~~aL~~LH~~---givH~dikp~Nili~~~~~~~kl 156 (342)
T cd07854 85 LTELNSVYIVQEYME-TDLANVLE----QGPLSEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANVFINTEDLVLKI 156 (342)
T ss_pred ccccceEEEEeeccc-ccHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCceEEE
Confidence 24689999996 58888874 24588999999999999999999999 999999999999997 5567899
Q ss_pred cccccccccCCCCCce--eeeEecccceeCcccccc-CCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhcccc
Q 002278 760 SDFGIARCIPTAMPHA--STFVLGTIGYIDPEYAHT-SRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDN 836 (943)
Q Consensus 760 ~DFGla~~~~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~ 836 (943)
+|||.++......... .....|+..|+|||.+.+ ..++.++|||||||++|||++|+.||.................
T Consensus 157 ~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~ 236 (342)
T cd07854 157 GDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVP 236 (342)
T ss_pred CCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcC
Confidence 9999998654321111 122347889999997654 5688899999999999999999999986655443332221110
Q ss_pred cccc------------cc-----CcccccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 002278 837 TVME------------AV-----DPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLV 885 (943)
Q Consensus 837 ~~~~------------~~-----~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~ 885 (943)
.... .. .+..+...........+.+++..|+..||++|||+.+++.+-+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h~~ 302 (342)
T cd07854 237 VVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMHPY 302 (342)
T ss_pred CCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCCCc
Confidence 0000 00 0000000000011245678999999999999999999998743
No 375
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=1.7e-32 Score=304.56 Aligned_cols=264 Identities=24% Similarity=0.219 Sum_probs=200.7
Q ss_pred hcccc-ceEEeeeceEEEEEEEec-CCceEEEEEecccCccc--------------HHHHHHHHHHHhcCCCCCcceeee
Q 002278 616 ENLSE-KYIVGYGASSTVYKCALK-NSRPIAVKKLYNQYPHN--------------LREFETELETIGSIRHRNIVSLHG 679 (943)
Q Consensus 616 ~~~~~-~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--------------~~~~~~E~~~l~~l~h~niv~l~~ 679 (943)
++|.. .+.||+|+||+||+|.++ .++.||+|++....... ...+.+|+++++.++||||+++++
T Consensus 8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~ 87 (335)
T PTZ00024 8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD 87 (335)
T ss_pred cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence 44543 467999999999999976 58899999886432211 124678999999999999999999
Q ss_pred EEecCCcceEEEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceee
Q 002278 680 YALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHL 759 (943)
Q Consensus 680 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl 759 (943)
++...+..++||||+. |+|.+++. ....+++..+..++.|++.||+|||+. +++||||+|+||+++.++.+++
T Consensus 88 ~~~~~~~~~lv~e~~~-~~l~~~l~---~~~~~~~~~~~~~~~ql~~aL~~LH~~---~i~H~dl~~~nill~~~~~~kl 160 (335)
T PTZ00024 88 VYVEGDFINLVMDIMA-SDLKKVVD---RKIRLTESQVKCILLQILNGLNVLHKW---YFMHRDLSPANIFINSKGICKI 160 (335)
T ss_pred EEecCCcEEEEEeccc-cCHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHeEECCCCCEEE
Confidence 9999999999999996 68988886 345689999999999999999999998 9999999999999999999999
Q ss_pred cccccccccCCCC-------------CceeeeEecccceeCccccccC-CCCCcchhhhHHHHHHHHHhCCCCCCCCccH
Q 002278 760 SDFGIARCIPTAM-------------PHASTFVLGTIGYIDPEYAHTS-RLNEKSDVYSFGIVLLEILTGKKAVDNESNL 825 (943)
Q Consensus 760 ~DFGla~~~~~~~-------------~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvil~elltG~~p~~~~~~~ 825 (943)
+|||.++...... ........++..|+|||.+.+. .++.++||||+||++|||+||+.||.+....
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~ 240 (335)
T PTZ00024 161 ADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEI 240 (335)
T ss_pred CCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 9999998664110 1111223468889999998764 4689999999999999999999999877765
Q ss_pred HHHHHHhccccccccccCc-------------ccccCc--cCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhh
Q 002278 826 HQLIMSKADDNTVMEAVDP-------------EVSVTC--VDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLVS 886 (943)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~-------------~~~~~~--~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~ 886 (943)
..........+.......+ ..+... ........+.+++..|++.+|++||++.+++.+-+-
T Consensus 241 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~~~ 316 (335)
T PTZ00024 241 DQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKHEYF 316 (335)
T ss_pred HHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcCccc
Confidence 5443332211111111000 000000 000112467789999999999999999999987654
No 376
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=8.7e-33 Score=307.55 Aligned_cols=260 Identities=25% Similarity=0.286 Sum_probs=201.7
Q ss_pred HhhccccceEEeeeceEEEEEEEec-CCceEEEEEecccC--cccHHHHHHHHHHHhcCCCCCcceeeeEEecCCc----
Q 002278 614 STENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQY--PHNLREFETELETIGSIRHRNIVSLHGYALSPYG---- 686 (943)
Q Consensus 614 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~---- 686 (943)
..++|+..+.||+|++|.||+|... +++.||+|++.... ......+.+|+.+++.++||||+++++++...+.
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF 92 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence 4678999999999999999999976 57889999886432 2334567789999999999999999998876654
Q ss_pred --ceEEEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeeccccc
Q 002278 687 --NLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGI 764 (943)
Q Consensus 687 --~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGl 764 (943)
.++|+||+ +++|.+++.. ..+++..+..++.|++.|++|||+. +|+||||||+||++++++.++|+|||+
T Consensus 93 ~~~~lv~e~~-~~~L~~~~~~----~~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nill~~~~~~kL~dfg~ 164 (343)
T cd07851 93 QDVYLVTHLM-GADLNNIVKC----QKLSDDHIQFLVYQILRGLKYIHSA---GIIHRDLKPSNIAVNEDCELKILDFGL 164 (343)
T ss_pred ccEEEEEecC-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEccccc
Confidence 78999998 6799998852 4689999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCceeeeEecccceeCcccccc-CCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccC
Q 002278 765 ARCIPTAMPHASTFVLGTIGYIDPEYAHT-SRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVD 843 (943)
Q Consensus 765 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 843 (943)
+...... .....++..|+|||...+ ..++.++||||+||++||+++|+.||.+..............+...+...
T Consensus 165 ~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~ 240 (343)
T cd07851 165 ARHTDDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELL 240 (343)
T ss_pred ccccccc----ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHH
Confidence 9866432 122357889999998765 46789999999999999999999999876654443332221111111100
Q ss_pred cccccC-------------ccC-----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 002278 844 PEVSVT-------------CVD-----LSAVRKTFQLALLCTKRYPSERPTMQEVARVLV 885 (943)
Q Consensus 844 ~~~~~~-------------~~~-----~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~ 885 (943)
..+... ... ......+.+++.+|+..+|++|||+.+++++-+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h~~ 300 (343)
T cd07851 241 QKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAHPY 300 (343)
T ss_pred hhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcCCC
Confidence 000000 000 011356789999999999999999999998743
No 377
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=2.6e-32 Score=301.38 Aligned_cols=263 Identities=25% Similarity=0.311 Sum_probs=200.3
Q ss_pred HHHHhhccccceEEeeeceEEEEEEEec-CCceEEEEEecccC--cccHHHHHHHHHHHhcCCCCCcceeeeEEec-CCc
Q 002278 611 IMRSTENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQY--PHNLREFETELETIGSIRHRNIVSLHGYALS-PYG 686 (943)
Q Consensus 611 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~ 686 (943)
+...+++|+..+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+++++.++||||+++++++.. ...
T Consensus 5 ~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~ 84 (328)
T cd07856 5 VFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLED 84 (328)
T ss_pred eeccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCc
Confidence 3446788999999999999999999866 68899999885432 2345678899999999999999999999876 456
Q ss_pred ceEEEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeeccccccc
Q 002278 687 NLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIAR 766 (943)
Q Consensus 687 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~ 766 (943)
.++++||+ +++|.+++. ...+++..+..++.|+++||+|||+. +|+||||+|+||++++++.++|+|||.+.
T Consensus 85 ~~lv~e~~-~~~L~~~~~----~~~~~~~~~~~~~~ql~~aL~~LH~~---~iiH~dl~p~Nili~~~~~~~l~dfg~~~ 156 (328)
T cd07856 85 IYFVTELL-GTDLHRLLT----SRPLEKQFIQYFLYQILRGLKYVHSA---GVVHRDLKPSNILINENCDLKICDFGLAR 156 (328)
T ss_pred EEEEeehh-ccCHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEeECCCCCEEeCcccccc
Confidence 78999998 678988875 34578888999999999999999999 99999999999999999999999999997
Q ss_pred ccCCCCCceeeeEecccceeCcccccc-CCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccc----
Q 002278 767 CIPTAMPHASTFVLGTIGYIDPEYAHT-SRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEA---- 841 (943)
Q Consensus 767 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~---- 841 (943)
...... ....++..|+|||.+.+ ..++.++||||+||++|||+||+.||................+...+.
T Consensus 157 ~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (328)
T cd07856 157 IQDPQM----TGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINT 232 (328)
T ss_pred ccCCCc----CCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHh
Confidence 553321 22347889999998766 568999999999999999999999997654322221111111100000
Q ss_pred ------------cCc--ccccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 002278 842 ------------VDP--EVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLV 885 (943)
Q Consensus 842 ------------~~~--~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~ 885 (943)
... ..+...........+.+++.+|+..+|++||++.+++.+-+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~~~ 290 (328)
T cd07856 233 ICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAHPY 290 (328)
T ss_pred ccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCCc
Confidence 000 00000000011256788999999999999999999988743
No 378
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=2.2e-32 Score=296.35 Aligned_cols=259 Identities=22% Similarity=0.282 Sum_probs=198.3
Q ss_pred cccceEEeeeceEEEEEEEec-CCceEEEEEecccCc-ccHHHHHHHHHHHhcCC-CCCcceeeeEEecCCcceEEEEEc
Q 002278 618 LSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQYP-HNLREFETELETIGSIR-HRNIVSLHGYALSPYGNLLFYDYM 694 (943)
Q Consensus 618 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~ 694 (943)
|+..+.||+|++|+||+|... .++.||+|++..... .......+|+..+++++ ||||+++++++.+++..++||||+
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM 80 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence 567788999999999999986 478899999865432 22334567999999999 999999999999999999999999
Q ss_pred cCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCCc
Q 002278 695 VNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPH 774 (943)
Q Consensus 695 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~~ 774 (943)
+|+|.+++.... ...+++.++..++.|++.||.|||+. +++|+||+|+||++++++.++|+|||.++........
T Consensus 81 -~~~l~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~~ 155 (283)
T cd07830 81 -EGNLYQLMKDRK-GKPFSESVIRSIIYQILQGLAHIHKH---GFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPPY 155 (283)
T ss_pred -CCCHHHHHHhcc-cccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCCEEEeecccceeccCCCCc
Confidence 889999886432 24689999999999999999999998 9999999999999999999999999999866443221
Q ss_pred eeeeEecccceeCcccccc-CCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhcccccccc-------------
Q 002278 775 ASTFVLGTIGYIDPEYAHT-SRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVME------------- 840 (943)
Q Consensus 775 ~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~------------- 840 (943)
....|+..|+|||++.+ ..++.++|+||||+++|||++|++||................+....
T Consensus 156 --~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (283)
T cd07830 156 --TDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKL 233 (283)
T ss_pred --CCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhccc
Confidence 22357889999998754 45789999999999999999999999766544333222111111000
Q ss_pred --ccCcccccCccC--HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002278 841 --AVDPEVSVTCVD--LSAVRKTFQLALLCTKRYPSERPTMQEVARV 883 (943)
Q Consensus 841 --~~~~~~~~~~~~--~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~ 883 (943)
...........+ ......+.++++.|++.+|++|||+.|++.+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~ 280 (283)
T cd07830 234 GFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQH 280 (283)
T ss_pred cccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhC
Confidence 000000000000 0112567899999999999999999999876
No 379
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=8.1e-32 Score=295.81 Aligned_cols=246 Identities=28% Similarity=0.381 Sum_probs=196.5
Q ss_pred cccceEEeeeceEEEEEEEec-CCceEEEEEecccCc---ccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEE
Q 002278 618 LSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQYP---HNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDY 693 (943)
Q Consensus 618 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 693 (943)
|...+.||+|+||+||+|... +++.||+|++..... ...+.+.+|+++++.++|||++++++++.+....++||||
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 102 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY 102 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence 666778999999999999975 578899998864322 2345678899999999999999999999999999999999
Q ss_pred ccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCC
Q 002278 694 MVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMP 773 (943)
Q Consensus 694 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~ 773 (943)
+. |++.+++.. ....+++.++..++.|++.|++|||+. +++||||+|+||+++.++.+||+|||++......
T Consensus 103 ~~-~~l~~~l~~--~~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~~-- 174 (313)
T cd06633 103 CL-GSASDLLEV--HKKPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSASKSSPA-- 174 (313)
T ss_pred CC-CCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChhhEEECCCCCEEEeecCCCcccCCC--
Confidence 95 577777753 234689999999999999999999999 9999999999999999999999999998643221
Q ss_pred ceeeeEecccceeCccccc---cCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccccCc
Q 002278 774 HASTFVLGTIGYIDPEYAH---TSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTC 850 (943)
Q Consensus 774 ~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 850 (943)
....|+..|+|||++. ...++.++|||||||++|||++|+.||................. .....+.
T Consensus 175 ---~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~----- 244 (313)
T cd06633 175 ---NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDS--PTLQSNE----- 244 (313)
T ss_pred ---CCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCC--CCCCccc-----
Confidence 2245889999999974 35688899999999999999999999987655444333222111 1111111
Q ss_pred cCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 002278 851 VDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLV 885 (943)
Q Consensus 851 ~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~ 885 (943)
....+.+++.+|++.+|++||++.+++.+-+
T Consensus 245 ----~~~~l~~li~~~l~~~P~~Rp~~~~~l~~~~ 275 (313)
T cd06633 245 ----WTDSFRGFVDYCLQKIPQERPASAELLRHDF 275 (313)
T ss_pred ----cCHHHHHHHHHHccCChhhCcCHHHHhcCcc
Confidence 1135678999999999999999999998744
No 380
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-33 Score=295.40 Aligned_cols=291 Identities=20% Similarity=0.271 Sum_probs=230.8
Q ss_pred hhccccceEEeeeceEEEEEEEecCCc-eEEEEEecccC---cccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEE
Q 002278 615 TENLSEKYIVGYGASSTVYKCALKNSR-PIAVKKLYNQY---PHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLF 690 (943)
Q Consensus 615 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~-~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 690 (943)
..+++.+..||-|+||.|=++..+... .+|+|.+++.. ....+.+..|-++|...+.|.||++|-.|.++...|++
T Consensus 419 l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmL 498 (732)
T KOG0614|consen 419 LSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYML 498 (732)
T ss_pred hhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhh
Confidence 345566677999999999999876543 47888776543 34456688899999999999999999999999999999
Q ss_pred EEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCC
Q 002278 691 YDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPT 770 (943)
Q Consensus 691 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~ 770 (943)
||-|-||.+...++ .++.++..+...++..+.+|++|||++ +||+|||||+|.+++.+|-+||.|||+|+.+..
T Consensus 499 mEaClGGElWTiLr---dRg~Fdd~tarF~~acv~EAfeYLH~k---~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~ 572 (732)
T KOG0614|consen 499 MEACLGGELWTILR---DRGSFDDYTARFYVACVLEAFEYLHRK---GIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGS 572 (732)
T ss_pred HHhhcCchhhhhhh---hcCCcccchhhhhHHHHHHHHHHHHhc---CceeccCChhheeeccCCceEEeehhhHHHhcc
Confidence 99999999999997 567899999999999999999999999 999999999999999999999999999998866
Q ss_pred CCCceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccccCc
Q 002278 771 AMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTC 850 (943)
Q Consensus 771 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 850 (943)
.. .+-..+|||.|.|||++..+.++.++|.||+|+++||++||.+||.+.+++..+..+...-..+. ++..+.
T Consensus 573 g~--KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid~i~--~Pr~I~--- 645 (732)
T KOG0614|consen 573 GR--KTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGIDKIE--FPRRIT--- 645 (732)
T ss_pred CC--ceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhhhhh--cccccc---
Confidence 53 34457899999999999999999999999999999999999999999998877766654433211 111121
Q ss_pred cCHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHHHHhhcC----------CCCCCccCcCCCCCCCcccceeecccc
Q 002278 851 VDLSAVRKTFQLALLCTKRYPSERPT-----MQEVARVLVSLL----------PAPPAKLSLAAPKPIDYYTKFVVNRER 915 (943)
Q Consensus 851 ~~~~~~~~l~~l~~~cl~~dP~~RPt-----~~el~~~L~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (943)
+...++++.....+|.+|-- ..++.+|-|-.- -.+|...+.+.|....+|.++. .
T Consensus 646 ------k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~Wf~gfdweglr~~~L~pPi~~~va~ptD~s~Fd~~p----~ 715 (732)
T KOG0614|consen 646 ------KTATDLIKKLCRDNPTERLGYQKGGINDIKKHRWFEGFDWEGLRSRTLPPPIIPSVANPTDVSNFDNFP----P 715 (732)
T ss_pred ------hhHHHHHHHHHhcCcHhhhccccCChHHHHhhhhhhcCChhhhhhccCCCCccccCCCcccchhccCCC----c
Confidence 33457888888999999974 788888876432 1234444566666666665443 2
Q ss_pred ccccccCCCCCcc
Q 002278 916 QQRVEHDDNSSDA 928 (943)
Q Consensus 916 ~~~~e~~~~~~~~ 928 (943)
....+++|+.|.|
T Consensus 716 dnd~pppde~SGW 728 (732)
T KOG0614|consen 716 DNDEPPPDELSGW 728 (732)
T ss_pred ccCCCCchhcccC
Confidence 3444554554433
No 381
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-34 Score=281.11 Aligned_cols=256 Identities=26% Similarity=0.325 Sum_probs=197.4
Q ss_pred ccccceEEeeeceEEEEEEEec-CCceEEEEEecccCc-ccHHHHHHHHHHHhc-CCCCCcceeeeEEecCCcceEEEEE
Q 002278 617 NLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQYP-HNLREFETELETIGS-IRHRNIVSLHGYALSPYGNLLFYDY 693 (943)
Q Consensus 617 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~-l~h~niv~l~~~~~~~~~~~lv~e~ 693 (943)
+++....||.|+||+|++-.++ .|+..|||++..... ...+++..|.++..+ -+.||||++||.+..++..++-||.
T Consensus 65 ~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMEL 144 (361)
T KOG1006|consen 65 NLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMEL 144 (361)
T ss_pred hHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHH
Confidence 3344556999999999999877 578899999976543 556778888887544 4699999999999999999999999
Q ss_pred ccCCChhhhccC--CCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCC
Q 002278 694 MVNGSLWDLLHG--PSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTA 771 (943)
Q Consensus 694 ~~~g~L~~~l~~--~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~ 771 (943)
|. -|+..+-+. .-.+..+++.-.-.|+...+.||.||-+.. .|+|||+||+|||++..|.+|+||||++-.+..+
T Consensus 145 Md-~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~l--kiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~S 221 (361)
T KOG1006|consen 145 MD-ISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEEL--KIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDS 221 (361)
T ss_pred Hh-hhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHh--hhhhccCChhheEEecCCCEeeecccchHhHHHH
Confidence 84 455443211 113456888888889999999999998764 8999999999999999999999999999776543
Q ss_pred CCceeeeEecccceeCcccccc--CCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccccC
Q 002278 772 MPHASTFVLGTIGYIDPEYAHT--SRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVT 849 (943)
Q Consensus 772 ~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 849 (943)
.. .+.-.|-..|||||.+.. ..|+.++||||+|++|||+.||+.||...+.....+.......+. .+..+
T Consensus 222 iA--kT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv~gdpp------~l~~~ 293 (361)
T KOG1006|consen 222 IA--KTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVVIGDPP------ILLFD 293 (361)
T ss_pred HH--hhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHHcCCCC------eecCc
Confidence 22 223358889999998864 458999999999999999999999999877655444433332221 11112
Q ss_pred ccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002278 850 CVDLSAVRKTFQLALLCTKRYPSERPTMQEVARV 883 (943)
Q Consensus 850 ~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~ 883 (943)
..+......+..++..|+.+|-..||.+.++.++
T Consensus 294 ~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~ 327 (361)
T KOG1006|consen 294 KECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKF 327 (361)
T ss_pred ccccccCHHHHHHHHHHhhcccccCcchhhhhcC
Confidence 2222334678899999999999999999998775
No 382
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-32 Score=319.89 Aligned_cols=261 Identities=27% Similarity=0.365 Sum_probs=208.1
Q ss_pred HhhccccceEEeeeceEEEEEEEecC--------CceEEEEEecccCc-ccHHHHHHHHHHHhcCC-CCCcceeeeEEec
Q 002278 614 STENLSEKYIVGYGASSTVYKCALKN--------SRPIAVKKLYNQYP-HNLREFETELETIGSIR-HRNIVSLHGYALS 683 (943)
Q Consensus 614 ~~~~~~~~~~lG~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~ 683 (943)
..++....+.+|+|+||.||+|.... ...||||.++.... ...+.+..|+++|+.+. ||||+.++|+|..
T Consensus 294 ~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~ 373 (609)
T KOG0200|consen 294 PRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQ 373 (609)
T ss_pred chhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeecc
Confidence 44555566699999999999998541 35689999876543 45678899999999995 9999999999999
Q ss_pred CCcceEEEEEccCCChhhhccCCC------C-----C--ccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEE
Q 002278 684 PYGNLLFYDYMVNGSLWDLLHGPS------K-----K--VKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNIL 750 (943)
Q Consensus 684 ~~~~~lv~e~~~~g~L~~~l~~~~------~-----~--~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nil 750 (943)
.+..++|+||+..|+|.++++..+ . . ..++..+.+.++.|||.|++||++. ++|||||.++|||
T Consensus 374 ~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~---~~vHRDLAaRNVL 450 (609)
T KOG0200|consen 374 DGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASV---PCVHRDLAARNVL 450 (609)
T ss_pred CCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhC---CccchhhhhhhEE
Confidence 999999999999999999997543 0 0 2388999999999999999999999 9999999999999
Q ss_pred ECCCCceeecccccccccCCCCCceeeeEec--ccceeCccccccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCccHHH
Q 002278 751 IDENFDAHLSDFGIARCIPTAMPHASTFVLG--TIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQ 827 (943)
Q Consensus 751 l~~~~~~kl~DFGla~~~~~~~~~~~~~~~g--t~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~p~~~~~~~~~ 827 (943)
++++..+||+|||+|+..............| +..|||||.+....|+.++|||||||+|||++| |..||.+......
T Consensus 451 i~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~~~ 530 (609)
T KOG0200|consen 451 ITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPTEE 530 (609)
T ss_pred ecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCcHHH
Confidence 9999999999999999665443333221222 456999999999999999999999999999999 9999987543333
Q ss_pred HHHHhccccccccccCcccccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcC
Q 002278 828 LIMSKADDNTVMEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLVSLL 888 (943)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~~~ 888 (943)
.......... .+.+. .+..+++++|+.||+.+|++||++.++.+.+....
T Consensus 531 l~~~l~~G~r------~~~P~-----~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~l 580 (609)
T KOG0200|consen 531 LLEFLKEGNR------MEQPE-----HCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKHL 580 (609)
T ss_pred HHHHHhcCCC------CCCCC-----CCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHHH
Confidence 3322221111 11111 12357889999999999999999999999998753
No 383
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=100.00 E-value=8.1e-32 Score=322.31 Aligned_cols=146 Identities=29% Similarity=0.369 Sum_probs=130.9
Q ss_pred hhccccceEEeeeceEEEEEEEec-CCceEEEEEecccC---cccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEE
Q 002278 615 TENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQY---PHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLF 690 (943)
Q Consensus 615 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 690 (943)
.++|.+.+.||+|+||+||+|.+. .++.||+|++.... ......+.+|+.+++.++||||+++++++......++|
T Consensus 3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lV 82 (669)
T cd05610 3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLV 82 (669)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEE
Confidence 367889999999999999999977 57899999986532 22346788999999999999999999999999999999
Q ss_pred EEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeeccccccc
Q 002278 691 YDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIAR 766 (943)
Q Consensus 691 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~ 766 (943)
|||+.+++|.+++. ....+++..++.++.||+.||+|||+. +||||||||+|||++.++.+||+|||+++
T Consensus 83 mEy~~g~~L~~li~---~~~~l~~~~~~~i~~qil~aL~yLH~~---gIiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 83 MEYLIGGDVKSLLH---IYGYFDEEMAVKYISEVALALDYLHRH---GIIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred EeCCCCCCHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 99999999999986 334688999999999999999999998 99999999999999999999999999986
No 384
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=2.3e-32 Score=296.00 Aligned_cols=260 Identities=25% Similarity=0.276 Sum_probs=202.0
Q ss_pred cccceEEeeeceEEEEEEEec-CCceEEEEEecccC--cccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEEc
Q 002278 618 LSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQY--PHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYM 694 (943)
Q Consensus 618 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 694 (943)
|+....||+|++|.||+|... +++.||+|.+.... ....+.+..|+++++.++|+|++++++++.+.+..++||||+
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC 80 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence 456678999999999999976 48899999987653 334567788999999999999999999999999999999999
Q ss_pred cCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCCc
Q 002278 695 VNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPH 774 (943)
Q Consensus 695 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~~ 774 (943)
+ ++|.+++... ...+++..+..++.|++.||+|||+. +|+||||+|+||++++++.++|+|||.++........
T Consensus 81 ~-~~l~~~i~~~--~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~ 154 (282)
T cd07829 81 D-MDLKKYLDKR--PGPLSPNLIKSIMYQLLRGLAYCHSH---RILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRT 154 (282)
T ss_pred C-cCHHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChheEEEcCCCCEEEecCCcccccCCCccc
Confidence 7 5899998732 14689999999999999999999999 9999999999999999999999999999876443221
Q ss_pred eeeeEecccceeCccccccC-CCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccc------------
Q 002278 775 ASTFVLGTIGYIDPEYAHTS-RLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEA------------ 841 (943)
Q Consensus 775 ~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~------------ 841 (943)
.....++..|+|||.+.+. .++.++|||||||++||+++|+.||....................+.
T Consensus 155 -~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (282)
T cd07829 155 -YTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYK 233 (282)
T ss_pred -cCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhccccccc
Confidence 1223467889999998776 78999999999999999999999998765544333222111100000
Q ss_pred -cCcccccCcc---CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 002278 842 -VDPEVSVTCV---DLSAVRKTFQLALLCTKRYPSERPTMQEVARVL 884 (943)
Q Consensus 842 -~~~~~~~~~~---~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L 884 (943)
..+....... .......+.+++..|+..+|++||++.+++.+-
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~p 280 (282)
T cd07829 234 PTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKHP 280 (282)
T ss_pred ccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhCc
Confidence 0000000000 001135688999999999999999999998763
No 385
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.98 E-value=6.9e-32 Score=299.13 Aligned_cols=262 Identities=21% Similarity=0.243 Sum_probs=194.7
Q ss_pred ccccceEEeeeceEEEEEEEecC---CceEEEEEecccC--cccHHHHHHHHHHHhcC-CCCCcceeeeEEecC----Cc
Q 002278 617 NLSEKYIVGYGASSTVYKCALKN---SRPIAVKKLYNQY--PHNLREFETELETIGSI-RHRNIVSLHGYALSP----YG 686 (943)
Q Consensus 617 ~~~~~~~lG~G~~g~Vy~~~~~~---~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~----~~ 686 (943)
+|+..+.||+|+||.||+|.... +..||+|++.... ....+.+.+|+++++++ +||||+++++++... ..
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 80 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE 80 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence 47778899999999999999763 6789999886432 22345678899999999 599999999976432 34
Q ss_pred ceEEEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeeccccccc
Q 002278 687 NLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIAR 766 (943)
Q Consensus 687 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~ 766 (943)
.++++||+. ++|.+++. ....+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++
T Consensus 81 ~~~~~e~~~-~~L~~~l~---~~~~~~~~~~~~~~~qi~~aL~~LH~~---givH~dlkp~Nili~~~~~~kl~Dfg~a~ 153 (332)
T cd07857 81 LYLYEELME-ADLHQIIR---SGQPLTDAHFQSFIYQILCGLKYIHSA---NVLHRDLKPGNLLVNADCELKICDFGLAR 153 (332)
T ss_pred EEEEEeccc-CCHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHeEEcCCCCEEeCcCCCce
Confidence 678888875 68988885 345689999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCc---eeeeEecccceeCcccccc-CCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccc-
Q 002278 767 CIPTAMPH---ASTFVLGTIGYIDPEYAHT-SRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEA- 841 (943)
Q Consensus 767 ~~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~- 841 (943)
........ ......|+..|+|||+..+ ..++.++||||+||++|+|++|++||................+...+.
T Consensus 154 ~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 233 (332)
T cd07857 154 GFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEET 233 (332)
T ss_pred ecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHH
Confidence 65432111 1123458999999998765 468999999999999999999999998665433322211111100000
Q ss_pred -----------------cCcccccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 002278 842 -----------------VDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLV 885 (943)
Q Consensus 842 -----------------~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~ 885 (943)
..+..............+.+++.+|++.||++|||+.+++++-+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~~~ 294 (332)
T cd07857 234 LSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEHPY 294 (332)
T ss_pred HHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChh
Confidence 00000000000011246789999999999999999999988754
No 386
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.98 E-value=4.8e-32 Score=289.67 Aligned_cols=250 Identities=23% Similarity=0.298 Sum_probs=196.1
Q ss_pred ccccceEEeeeceEEEEEEEecC-CceEEEEEeccc-----CcccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEE
Q 002278 617 NLSEKYIVGYGASSTVYKCALKN-SRPIAVKKLYNQ-----YPHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLF 690 (943)
Q Consensus 617 ~~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 690 (943)
+|...+.||+|+||.||++.+.. +..+++|.++.. .......+..|+.+++.++||||+++++++.+....++|
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 47788899999999999998764 344555554321 122334577899999999999999999999998899999
Q ss_pred EEEccCCChhhhccCC-CCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccC
Q 002278 691 YDYMVNGSLWDLLHGP-SKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIP 769 (943)
Q Consensus 691 ~e~~~~g~L~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~ 769 (943)
|||+++++|.+++... .....+++.+++.++.|++.|++|||+. +++|+||||+||++++ +.++++|||.++...
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~ 156 (260)
T cd08222 81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQR---RILHRDLKAKNIFLKN-NLLKIGDFGVSRLLM 156 (260)
T ss_pred EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHc---CccccCCChhheEeec-CCEeecccCceeecC
Confidence 9999999999888532 2335689999999999999999999999 9999999999999975 569999999998764
Q ss_pred CCCCceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccccC
Q 002278 770 TAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVT 849 (943)
Q Consensus 770 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 849 (943)
.... ......|++.|+|||...+..++.++|+||||+++|+|++|..||................ .+...
T Consensus 157 ~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~-- 226 (260)
T cd08222 157 GSCD-LATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIVEGP-------TPSLP-- 226 (260)
T ss_pred CCcc-cccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHcCC-------CCCCc--
Confidence 3322 1223447889999999988889999999999999999999999997655433332222111 11111
Q ss_pred ccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002278 850 CVDLSAVRKTFQLALLCTKRYPSERPTMQEVARV 883 (943)
Q Consensus 850 ~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~ 883 (943)
......+.+++.+|++.+|++||++.+++++
T Consensus 227 ---~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 257 (260)
T cd08222 227 ---ETYSRQLNSIMQSMLNKDPSLRPSAAEILRN 257 (260)
T ss_pred ---chhcHHHHHHHHHHhcCChhhCcCHHHHhhC
Confidence 1223467789999999999999999999886
No 387
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.98 E-value=1.8e-32 Score=250.34 Aligned_cols=260 Identities=21% Similarity=0.246 Sum_probs=207.6
Q ss_pred ccccceEEeeeceEEEEEEEec-CCceEEEEEecccC--cccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEE
Q 002278 617 NLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQY--PHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDY 693 (943)
Q Consensus 617 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 693 (943)
+|...+.||+|.||+||+|+.+ .++.||+|++.-.. +.......+|+-+++.++|.|||+++++...+....+|+||
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~ 82 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF 82 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHH
Confidence 4566778999999999999976 46789999886432 33345678999999999999999999999999999999999
Q ss_pred ccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCC
Q 002278 694 MVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMP 773 (943)
Q Consensus 694 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~ 773 (943)
|. .+|..+... -.+.++.+.+..++.|+++|+.|+|++ ++.|||+||+|.+++.+|+.|++|||+|+.++-...
T Consensus 83 cd-qdlkkyfds--lng~~d~~~~rsfmlqllrgl~fchsh---nvlhrdlkpqnllin~ngelkladfglarafgipvr 156 (292)
T KOG0662|consen 83 CD-QDLKKYFDS--LNGDLDPEIVRSFMLQLLRGLGFCHSH---NVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVR 156 (292)
T ss_pred hh-HHHHHHHHh--cCCcCCHHHHHHHHHHHHhhhhhhhhh---hhhhccCCcceEEeccCCcEEecccchhhhcCCceE
Confidence 94 467666642 356789999999999999999999999 999999999999999999999999999997765432
Q ss_pred ceeeeEecccceeCccccccC-CCCCcchhhhHHHHHHHHHh-CCCCCCCCccHHHHHHHhccccccccccCcccccCc-
Q 002278 774 HASTFVLGTIGYIDPEYAHTS-RLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTC- 850 (943)
Q Consensus 774 ~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 850 (943)
..+..+-|.+|.+|.++.+. -|++..|+||.||++.|+.. |++.|.+.+..+++.++...-+...+..+|.+..-.
T Consensus 157 -cysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpd 235 (292)
T KOG0662|consen 157 -CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPD 235 (292)
T ss_pred -eeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCC
Confidence 22333468999999999885 58999999999999999987 888888888788888877766666666555442110
Q ss_pred -------cC----HHHH----HHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002278 851 -------VD----LSAV----RKTFQLALLCTKRYPSERPTMQEVARV 883 (943)
Q Consensus 851 -------~~----~~~~----~~l~~l~~~cl~~dP~~RPt~~el~~~ 883 (943)
+. ...+ ..-.++++..+.-+|.+|.++++.+++
T Consensus 236 yk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqh 283 (292)
T KOG0662|consen 236 YKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQH 283 (292)
T ss_pred CcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcC
Confidence 00 0111 122467777888889999999888776
No 388
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.98 E-value=7.4e-32 Score=286.38 Aligned_cols=240 Identities=25% Similarity=0.296 Sum_probs=194.9
Q ss_pred EeeeceEEEEEEEec-CCceEEEEEecccCc---ccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEEccCCCh
Q 002278 624 VGYGASSTVYKCALK-NSRPIAVKKLYNQYP---HNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSL 699 (943)
Q Consensus 624 lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 699 (943)
||+|+||.||++... +++.+|+|.+..... .....+..|+++++.++||||+++++.+..+...+++|||+++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 689999999999976 478999998865432 2455788999999999999999999999999999999999999999
Q ss_pred hhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCCceeeeE
Q 002278 700 WDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFV 779 (943)
Q Consensus 700 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~~ 779 (943)
.+++.. ...+++..+..++.|++.|+.|||+. +++|+||+|+||+++.++.++|+|||.+........ .....
T Consensus 81 ~~~l~~---~~~l~~~~~~~~~~qi~~~l~~lh~~---~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~-~~~~~ 153 (250)
T cd05123 81 FSHLSK---EGRFSEERARFYAAEIVLALEYLHSL---GIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGS-RTNTF 153 (250)
T ss_pred HHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcceEEEcCCCcEEEeecCcceecccCCC-cccCC
Confidence 999863 34689999999999999999999998 999999999999999999999999999987644321 22234
Q ss_pred ecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccccCccCHHHHHHH
Q 002278 780 LGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAVRKT 859 (943)
Q Consensus 780 ~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 859 (943)
.++..|+|||...+...+.++|+||||+++||+++|+.||...... .......... ..++.. ....+
T Consensus 154 ~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~-~~~~~~~~~~-------~~~~~~-----~~~~l 220 (250)
T cd05123 154 CGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRK-EIYEKILKDP-------LRFPEF-----LSPEA 220 (250)
T ss_pred cCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH-HHHHHHhcCC-------CCCCCC-----CCHHH
Confidence 5788999999999888999999999999999999999999766542 2222221111 111111 12466
Q ss_pred HHHHHHccCCCCCCCCCH---HHHHHH
Q 002278 860 FQLALLCTKRYPSERPTM---QEVARV 883 (943)
Q Consensus 860 ~~l~~~cl~~dP~~RPt~---~el~~~ 883 (943)
.++++.|+..||++||++ .++.++
T Consensus 221 ~~~i~~~l~~~p~~R~~~~~~~~l~~~ 247 (250)
T cd05123 221 RDLISGLLQKDPTKRLGSGGAEEIKAH 247 (250)
T ss_pred HHHHHHHhcCCHhhCCCcccHHHHHhC
Confidence 789999999999999999 666554
No 389
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.98 E-value=3.7e-32 Score=304.18 Aligned_cols=262 Identities=22% Similarity=0.336 Sum_probs=215.6
Q ss_pred CHHHHHHHhhccccceEEeeeceEEEEEEEec-CCceEEEEEecccCcccHHHHHHHHHHHhcC-CCCCcceeeeEEec-
Q 002278 607 TFDDIMRSTENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQYPHNLREFETELETIGSI-RHRNIVSLHGYALS- 683 (943)
Q Consensus 607 ~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~- 683 (943)
.++.+...++.|++..+||+|.+|.||+++.+ +++..|+|+.. ...+..++++.|.++++.. .|||++.++|+|..
T Consensus 10 ~~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~-~~~d~deEiE~eynil~~~~~hpnv~~fyg~~~k~ 88 (953)
T KOG0587|consen 10 DLSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMD-PTEDEEEEIELEYNMLKKYSHHPNVATFYGAFIKK 88 (953)
T ss_pred chhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeec-CCccccHHHHHHHHHHHhccCCCCcceEEEEEEEe
Confidence 34555567788999999999999999999966 56777777654 4455667888899999888 59999999999853
Q ss_pred ----CCcceEEEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceee
Q 002278 684 ----PYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHL 759 (943)
Q Consensus 684 ----~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl 759 (943)
+++.++|||||.+|+..|+++... ..++.|+.+..|++.++.|+.+||.. .++|||||-.|||++.++.||+
T Consensus 89 ~~~~~DqLWLVMEfC~gGSVTDLVKn~~-g~rl~E~~IaYI~re~lrgl~HLH~n---kviHRDikG~NiLLT~e~~VKL 164 (953)
T KOG0587|consen 89 DPGNGDQLWLVMEFCGGGSVTDLVKNTK-GNRLKEEWIAYILREILRGLAHLHNN---KVIHRDIKGQNVLLTENAEVKL 164 (953)
T ss_pred cCCCCCeEEEEeeccCCccHHHHHhhhc-ccchhhHHHHHHHHHHHHHHHHHhhc---ceeeecccCceEEEeccCcEEE
Confidence 567899999999999999998765 67899999999999999999999999 9999999999999999999999
Q ss_pred cccccccccCCCCCceeeeEecccceeCcccccc-----CCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhcc
Q 002278 760 SDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHT-----SRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKAD 834 (943)
Q Consensus 760 ~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~ 834 (943)
+|||.+..+....... ...+||+.|||||++.- ..|+.++|+||+|++..||.-|.+|+.+..++-.++.+..
T Consensus 165 vDFGvSaQldsT~grR-nT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraLF~IpR- 242 (953)
T KOG0587|consen 165 VDFGVSAQLDSTVGRR-NTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPR- 242 (953)
T ss_pred eeeeeeeeeecccccc-cCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhhccCCC-
Confidence 9999999886654443 34569999999999864 3477899999999999999999999988776655443322
Q ss_pred ccccccccCcccccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 002278 835 DNTVMEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVL 884 (943)
Q Consensus 835 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L 884 (943)
.-+|.+.. .....+++.++|..|+.+|.++||++.++++|-
T Consensus 243 ------NPPPkLkr---p~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~hp 283 (953)
T KOG0587|consen 243 ------NPPPKLKR---PKKWSKKFNDFISTCLVKDYEQRPSTEELLKHP 283 (953)
T ss_pred ------CCCccccc---hhhHHHHHHHHHHHHHhhccccCcchhhhccCC
Confidence 22222221 123457888999999999999999999998874
No 390
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.97 E-value=9.6e-33 Score=282.50 Aligned_cols=261 Identities=20% Similarity=0.243 Sum_probs=207.7
Q ss_pred hhccccceEEeeeceEEEEEEEecC-CceEEEEEecccCcccHHHHHHHHHHHhcCC-C-C----CcceeeeEEecCCcc
Q 002278 615 TENLSEKYIVGYGASSTVYKCALKN-SRPIAVKKLYNQYPHNLREFETELETIGSIR-H-R----NIVSLHGYALSPYGN 687 (943)
Q Consensus 615 ~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h-~----niv~l~~~~~~~~~~ 687 (943)
+.+|.+...+|+|.||.|-.+.++. +..||+|+++.. ....+...-|+++++++. + | -+|.+.++|.-.++.
T Consensus 88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V-~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghi 166 (415)
T KOG0671|consen 88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNV-DKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHI 166 (415)
T ss_pred ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHH-HHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCce
Confidence 7789999999999999999998764 588999988643 344456677999999994 2 3 378888889999999
Q ss_pred eEEEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECC--------------
Q 002278 688 LLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDE-------------- 753 (943)
Q Consensus 688 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~-------------- 753 (943)
+||+|.+ |-|+.|++... +..+++...+..|+.|++++++|||+. +++|-||||+||++.+
T Consensus 167 Civfell-G~S~~dFlk~N-~y~~fpi~~ir~m~~QL~~sv~fLh~~---kl~HTDLKPENILfvss~~~~~~~~k~~~~ 241 (415)
T KOG0671|consen 167 CIVFELL-GLSTFDFLKEN-NYIPFPIDHIRHMGYQLLESVAFLHDL---KLTHTDLKPENILFVSSEYFKTYNPKKKVC 241 (415)
T ss_pred EEEEecc-ChhHHHHhccC-CccccchHHHHHHHHHHHHHHHHHHhc---ceeecCCChheEEEeccceEEEeccCCccc
Confidence 9999987 77999999754 456799999999999999999999999 9999999999999832
Q ss_pred ------CCceeecccccccccCCCCCceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHH
Q 002278 754 ------NFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQ 827 (943)
Q Consensus 754 ------~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~ 827 (943)
+..++++|||.|++..... +..+.|..|+|||++.+-+++.++||||+||||+|+.||...|+.-++.+.
T Consensus 242 ~~r~~ks~~I~vIDFGsAtf~~e~h----s~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EH 317 (415)
T KOG0671|consen 242 FIRPLKSTAIKVIDFGSATFDHEHH----STIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENLEH 317 (415)
T ss_pred eeccCCCcceEEEecCCcceeccCc----ceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcHHH
Confidence 2358999999998654332 456789999999999999999999999999999999999999987776665
Q ss_pred HHHHhcccccccccc---------------------------------CcccccCccCHHHHHHHHHHHHHccCCCCCCC
Q 002278 828 LIMSKADDNTVMEAV---------------------------------DPEVSVTCVDLSAVRKTFQLALLCTKRYPSER 874 (943)
Q Consensus 828 ~~~~~~~~~~~~~~~---------------------------------~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~R 874 (943)
+.....-.++++... .|.-........+...++++++.|+..||.+|
T Consensus 318 LaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~R 397 (415)
T KOG0671|consen 318 LAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARR 397 (415)
T ss_pred HHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCcccc
Confidence 544333333322111 11111111223456789999999999999999
Q ss_pred CCHHHHHHHHh
Q 002278 875 PTMQEVARVLV 885 (943)
Q Consensus 875 Pt~~el~~~L~ 885 (943)
+|+.|++.|-.
T Consensus 398 iTl~EAL~HpF 408 (415)
T KOG0671|consen 398 ITLREALSHPF 408 (415)
T ss_pred ccHHHHhcCHH
Confidence 99999998743
No 391
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.97 E-value=9e-32 Score=274.17 Aligned_cols=264 Identities=19% Similarity=0.284 Sum_probs=209.2
Q ss_pred HHHHHHhhccccceEEeeeceEEEEEEEecC------CceEEEEEecccC-cccHHHHHHHHHHHhcCCCCCcceeeeEE
Q 002278 609 DDIMRSTENLSEKYIVGYGASSTVYKCALKN------SRPIAVKKLYNQY-PHNLREFETELETIGSIRHRNIVSLHGYA 681 (943)
Q Consensus 609 ~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~ 681 (943)
.++.....+++..-.+-+|.||.||.|.+++ .+.|.+|.++... +-....+..|.-.+..+.|||+..+.+++
T Consensus 277 ~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ 356 (563)
T KOG1024|consen 277 QELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVS 356 (563)
T ss_pred HhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEE
Confidence 3344455666667788999999999997653 3557777775432 33345677888888999999999999998
Q ss_pred ecC-CcceEEEEEccCCChhhhcc-----CCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCC
Q 002278 682 LSP-YGNLLFYDYMVNGSLWDLLH-----GPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENF 755 (943)
Q Consensus 682 ~~~-~~~~lv~e~~~~g~L~~~l~-----~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~ 755 (943)
.++ ...+++|.++.-|+|..++. .......+...+...++.|++.|++|||.+ ++||.||.++|.++|+.-
T Consensus 357 ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~---~ViHkDiAaRNCvIdd~L 433 (563)
T KOG1024|consen 357 IEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNH---GVIHKDIAARNCVIDDQL 433 (563)
T ss_pred eeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhc---Ccccchhhhhcceehhhe
Confidence 765 45688899999999999997 444455678888899999999999999999 999999999999999999
Q ss_pred ceeecccccccccCCCCCceeee-EecccceeCccccccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCccHHHHHHHhc
Q 002278 756 DAHLSDFGIARCIPTAMPHASTF-VLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKA 833 (943)
Q Consensus 756 ~~kl~DFGla~~~~~~~~~~~~~-~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~ 833 (943)
+|||+|=.+++.+-..+.+.-.. ...+..||+||.+....|+.++|||||||+||||+| |+.|+...++.+.......
T Consensus 434 qVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~ylkd 513 (563)
T KOG1024|consen 434 QVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEHYLKD 513 (563)
T ss_pred eEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHHHHHhc
Confidence 99999999999775554433211 124678999999999999999999999999999999 9999998877665443322
Q ss_pred cccccccccCcccccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhc
Q 002278 834 DDNTVMEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLVSL 887 (943)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~~ 887 (943)
+. .+. -+. .++.+++.++.-||..+|++||++++++..|.++
T Consensus 514 Gy-Rla------QP~-----NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF 555 (563)
T KOG1024|consen 514 GY-RLA------QPF-----NCPDELFTVMACCWALLPEERPSFSQLVICLSEF 555 (563)
T ss_pred cc-eec------CCC-----CCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHH
Confidence 21 111 112 2345789999999999999999999999988764
No 392
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.97 E-value=5.2e-32 Score=295.70 Aligned_cols=243 Identities=21% Similarity=0.243 Sum_probs=193.4
Q ss_pred hhccccceEEeeeceEEEEEEEec-CCceEEEEEecccCcccHHHHHHHHHHHhcC-CCCCcceeeeEEecCCcceEEEE
Q 002278 615 TENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQYPHNLREFETELETIGSI-RHRNIVSLHGYALSPYGNLLFYD 692 (943)
Q Consensus 615 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e 692 (943)
++.|.....+|.|+|+.|-.+... +++..+||.+.+. ..+..+|+.++... .||||+++.+.+.+..+.++|||
T Consensus 321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~----~~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e 396 (612)
T KOG0603|consen 321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKR----ADDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVME 396 (612)
T ss_pred chhhccccccCCCCccceeeeeccccccchhheecccc----ccccccccchhhhhcCCCcceeecceecCCceeeeeeh
Confidence 566777778999999999999876 4678899998655 23445677665555 69999999999999999999999
Q ss_pred EccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEE-CCCCceeecccccccccCCC
Q 002278 693 YMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILI-DENFDAHLSDFGIARCIPTA 771 (943)
Q Consensus 693 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill-~~~~~~kl~DFGla~~~~~~ 771 (943)
.+.||-+.+.+. ... .....+..|+.+|+.|+.|||++ |+|||||||+|||+ ++.++++|+|||.++.....
T Consensus 397 ~l~g~ell~ri~---~~~-~~~~e~~~w~~~lv~Av~~LH~~---gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~ 469 (612)
T KOG0603|consen 397 LLDGGELLRRIR---SKP-EFCSEASQWAAELVSAVDYLHEQ---GVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS 469 (612)
T ss_pred hccccHHHHHHH---hcc-hhHHHHHHHHHHHHHHHHHHHhc---CeeecCCChhheeecCCCCcEEEEEechhhhCchh
Confidence 999998887775 222 23367778999999999999999 99999999999999 58999999999999877554
Q ss_pred CCceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccccCcc
Q 002278 772 MPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCV 851 (943)
Q Consensus 772 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 851 (943)
....+=|..|.|||+....+|++++|+||||++||+|++|+.||.....-..+.. ....+++.+.
T Consensus 470 ----~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~~-~i~~~~~s~~---------- 534 (612)
T KOG0603|consen 470 ----CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIEIHT-RIQMPKFSEC---------- 534 (612)
T ss_pred ----hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCchHHHHH-hhcCCccccc----------
Confidence 1112347899999999999999999999999999999999999975443322221 1111211111
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhh
Q 002278 852 DLSAVRKTFQLALLCTKRYPSERPTMQEVARVLVS 886 (943)
Q Consensus 852 ~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~ 886 (943)
......+++.+|++.||.+||++.++..|-|.
T Consensus 535 ---vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h~w~ 566 (612)
T KOG0603|consen 535 ---VSDEAKDLLQQLLQVDPALRLGADEIGAHPWF 566 (612)
T ss_pred ---cCHHHHHHHHHhccCChhhCcChhhhccCcch
Confidence 11344589999999999999999999998776
No 393
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.97 E-value=8.2e-31 Score=275.69 Aligned_cols=225 Identities=23% Similarity=0.256 Sum_probs=178.1
Q ss_pred eceEEEEEEEec-CCceEEEEEecccCcccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEEccCCChhhhccC
Q 002278 627 GASSTVYKCALK-NSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHG 705 (943)
Q Consensus 627 G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~ 705 (943)
|.+|.||++.++ +++.||+|++.... .+.+|...+....||||+++++++.+.+..+++|||+++|+|.+++..
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 78 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISK 78 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHH
Confidence 899999999976 57889999986542 234455555566799999999999999999999999999999998863
Q ss_pred CCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCCceeeeEecccce
Q 002278 706 PSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGY 785 (943)
Q Consensus 706 ~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y 785 (943)
...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++++|||.+....... ....++..|
T Consensus 79 ---~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~----~~~~~~~~y 148 (237)
T cd05576 79 ---FLNIPEECVKRWAAEMVVALDALHRE---GIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSC----DGEAVENMY 148 (237)
T ss_pred ---hcCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCCCEEEecccchhcccccc----ccCCcCccc
Confidence 34589999999999999999999998 99999999999999999999999999886554321 122357789
Q ss_pred eCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccccCccCHHHHHHHHHHHHH
Q 002278 786 IDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAVRKTFQLALL 865 (943)
Q Consensus 786 ~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ 865 (943)
+|||...+..++.++||||+|+++|||++|+.|+....... . ......++. .....+.+++.+
T Consensus 149 ~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~-------~-----~~~~~~~~~-----~~~~~~~~li~~ 211 (237)
T cd05576 149 CAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSGI-------N-----THTTLNIPE-----WVSEEARSLLQQ 211 (237)
T ss_pred cCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhc-------c-----cccccCCcc-----cCCHHHHHHHHH
Confidence 99999988889999999999999999999998875321100 0 000001110 112456789999
Q ss_pred ccCCCCCCCCCH-----HHHHHH
Q 002278 866 CTKRYPSERPTM-----QEVARV 883 (943)
Q Consensus 866 cl~~dP~~RPt~-----~el~~~ 883 (943)
|++.||++||++ .++++|
T Consensus 212 ~l~~dp~~R~~~~~~~~~~~~~h 234 (237)
T cd05576 212 LLQFNPTERLGAGVAGVEDIKSH 234 (237)
T ss_pred HccCCHHHhcCCCccchHHHHcC
Confidence 999999999986 555543
No 394
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=9.1e-32 Score=277.37 Aligned_cols=259 Identities=21% Similarity=0.268 Sum_probs=197.3
Q ss_pred HhhccccceEEeeeceEEEEEEEec-CCceEEEEEeccc-Ccc------cHHHHHHHHHHHhcCCCCCcceeeeEEec-C
Q 002278 614 STENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQ-YPH------NLREFETELETIGSIRHRNIVSLHGYALS-P 684 (943)
Q Consensus 614 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~------~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~ 684 (943)
-.++|-..+.||+|||+.||+|.+- ..+.||||+-.-. ... ..+...+|.++-+.+.||.||++|+||.- .
T Consensus 461 Ln~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDt 540 (775)
T KOG1151|consen 461 LNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDT 540 (775)
T ss_pred hHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeecc
Confidence 3567777889999999999999865 4677888865321 111 12235689999999999999999999964 4
Q ss_pred CcceEEEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEEC---CCCceeecc
Q 002278 685 YGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILID---ENFDAHLSD 761 (943)
Q Consensus 685 ~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~---~~~~~kl~D 761 (943)
+..+-|+|||+|.+|.-+|+ ....+++.++..|+.||+.||.||.+. +++|+|-||||.|||+- .-|.+||.|
T Consensus 541 dsFCTVLEYceGNDLDFYLK---QhklmSEKEARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgNILLv~GtacGeIKITD 616 (775)
T KOG1151|consen 541 DSFCTVLEYCEGNDLDFYLK---QHKLMSEKEARSIIMQIVNALKYLNEI-KPPIIHYDLKPGNILLVNGTACGEIKITD 616 (775)
T ss_pred ccceeeeeecCCCchhHHHH---hhhhhhHHHHHHHHHHHHHHHHHHhcc-CCCeeeeccCCccEEEecCcccceeEeee
Confidence 56788999999999999997 455689999999999999999999987 78999999999999994 457899999
Q ss_pred cccccccCCCCCc------eeeeEecccceeCccccccC----CCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHH
Q 002278 762 FGIARCIPTAMPH------ASTFVLGTIGYIDPEYAHTS----RLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMS 831 (943)
Q Consensus 762 FGla~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~----~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~ 831 (943)
||+++.++++... .+....||.+|.+||.+.-+ ..+.|+||||+|||+|..+.|+.||........+...
T Consensus 617 FGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqe 696 (775)
T KOG1151|consen 617 FGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQE 696 (775)
T ss_pred cchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHhh
Confidence 9999998654332 23345699999999977533 4678999999999999999999999876544333221
Q ss_pred hccccccccccCcccccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002278 832 KADDNTVMEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARV 883 (943)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~ 883 (943)
..+...-.-.++... ....+.-.+|++|+++--++|....++..+
T Consensus 697 ----NTIlkAtEVqFP~KP---vVsseAkaFIRRCLaYRKeDR~DV~qLA~d 741 (775)
T KOG1151|consen 697 ----NTILKATEVQFPPKP---VVSSEAKAFIRRCLAYRKEDRIDVQQLACD 741 (775)
T ss_pred ----hchhcceeccCCCCC---ccCHHHHHHHHHHHHhhhhhhhhHHHHccC
Confidence 111111111111000 111344578999999999999999888764
No 395
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.97 E-value=2.4e-30 Score=293.18 Aligned_cols=266 Identities=18% Similarity=0.207 Sum_probs=182.4
Q ss_pred HhhccccceEEeeeceEEEEEEEe-----------------cCCceEEEEEecccCcccHHH--------------HHHH
Q 002278 614 STENLSEKYIVGYGASSTVYKCAL-----------------KNSRPIAVKKLYNQYPHNLRE--------------FETE 662 (943)
Q Consensus 614 ~~~~~~~~~~lG~G~~g~Vy~~~~-----------------~~~~~vavK~~~~~~~~~~~~--------------~~~E 662 (943)
..++|.+.++||+|+||+||+|.. ..++.||||++........++ ...|
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE 222 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE 222 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence 567899999999999999999964 235679999986443222222 3346
Q ss_pred HHHHhcCCCCCc-----ceeeeEEec--------CCcceEEEEEccCCChhhhccCCC---------------------C
Q 002278 663 LETIGSIRHRNI-----VSLHGYALS--------PYGNLLFYDYMVNGSLWDLLHGPS---------------------K 708 (943)
Q Consensus 663 ~~~l~~l~h~ni-----v~l~~~~~~--------~~~~~lv~e~~~~g~L~~~l~~~~---------------------~ 708 (943)
+.++.+++|.++ ++++++|.. .+..++||||+++|+|.++++... .
T Consensus 223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~ 302 (507)
T PLN03224 223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP 302 (507)
T ss_pred HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence 677777766544 677777753 346799999999999999986421 0
Q ss_pred CccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCCceeeeEecccceeCc
Q 002278 709 KVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDP 788 (943)
Q Consensus 709 ~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aP 788 (943)
...+++..+..++.|++.||+|+|+. +|+||||||+||+++.++.+||+|||+++.+............+++.|+||
T Consensus 303 ~~~~~~~~~~~i~~ql~~aL~~lH~~---~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aP 379 (507)
T PLN03224 303 QDKRDINVIKGVMRQVLTGLRKLHRI---GIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPP 379 (507)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeCh
Confidence 12356788899999999999999999 999999999999999999999999999976543322222223358899999
Q ss_pred cccccCC----------------------CCCcchhhhHHHHHHHHHhCCC-CCCCCccHHHHHHHhccccc-c--cccc
Q 002278 789 EYAHTSR----------------------LNEKSDVYSFGIVLLEILTGKK-AVDNESNLHQLIMSKADDNT-V--MEAV 842 (943)
Q Consensus 789 E~~~~~~----------------------~~~~~DvwSlGvil~elltG~~-p~~~~~~~~~~~~~~~~~~~-~--~~~~ 842 (943)
|.+.... ...+.||||+||++|+|++|.. ||.+................ + ....
T Consensus 380 E~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~ 459 (507)
T PLN03224 380 EELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQ 459 (507)
T ss_pred hhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhccc
Confidence 9875432 1134799999999999999875 66532111111100000000 0 0000
Q ss_pred CcccccCccCHHHHHHHHHHHHHccCCCC---CCCCCHHHHHHHHh
Q 002278 843 DPEVSVTCVDLSAVRKTFQLALLCTKRYP---SERPTMQEVARVLV 885 (943)
Q Consensus 843 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP---~~RPt~~el~~~L~ 885 (943)
...+.. .........+++.+++..+| .+|+|++|+++|-+
T Consensus 460 ~~~~~~---~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp~ 502 (507)
T PLN03224 460 KYDFSL---LDRNKEAGWDLACKLITKRDQANRGRLSVGQALSHRF 502 (507)
T ss_pred CCCccc---ccccChHHHHHHHHHhccCCCCcccCCCHHHHhCCCC
Confidence 111110 00112456688999998766 68999999999865
No 396
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.97 E-value=8.2e-30 Score=269.00 Aligned_cols=239 Identities=27% Similarity=0.360 Sum_probs=196.2
Q ss_pred ceEEEEEEEecC-CceEEEEEecccCccc-HHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEEccCCChhhhccC
Q 002278 628 ASSTVYKCALKN-SRPIAVKKLYNQYPHN-LREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHG 705 (943)
Q Consensus 628 ~~g~Vy~~~~~~-~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~ 705 (943)
+||.||+|.... ++.+|+|++....... .+.+.+|++.+++++|+||+++++++......++++||+++++|.+++..
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~ 80 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK 80 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence 589999999874 8899999987655444 67899999999999999999999999999999999999999999999863
Q ss_pred CCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCCceeeeEecccce
Q 002278 706 PSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGY 785 (943)
Q Consensus 706 ~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y 785 (943)
. ..+++..+..++.+++.+++|||+. +++|+||+|+||++++++.++++|||.+....... ......++..|
T Consensus 81 ~---~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~--~~~~~~~~~~~ 152 (244)
T smart00220 81 R---GRLSEDEARFYARQILSALEYLHSN---GIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG--LLTTFVGTPEY 152 (244)
T ss_pred c---cCCCHHHHHHHHHHHHHHHHHHHHc---CeecCCcCHHHeEECCCCcEEEccccceeeecccc--ccccccCCcCC
Confidence 2 2388999999999999999999999 99999999999999999999999999998765432 22334578899
Q ss_pred eCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccccCccCHHHHHHHHHHHHH
Q 002278 786 IDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAVRKTFQLALL 865 (943)
Q Consensus 786 ~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ 865 (943)
+|||...+..++.++||||+|+++|++++|..||.......................... ....+.+++.+
T Consensus 153 ~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~i~~ 223 (244)
T smart00220 153 MAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPPPEWK---------ISPEAKDLIRK 223 (244)
T ss_pred CCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCCCcccccc---------CCHHHHHHHHH
Confidence 999999988899999999999999999999999987444444333322211111110000 22567889999
Q ss_pred ccCCCCCCCCCHHHHHHH
Q 002278 866 CTKRYPSERPTMQEVARV 883 (943)
Q Consensus 866 cl~~dP~~RPt~~el~~~ 883 (943)
|+..+|++||++.+++++
T Consensus 224 ~l~~~p~~Rp~~~~~~~~ 241 (244)
T smart00220 224 LLVKDPEKRLTAEEALQH 241 (244)
T ss_pred HccCCchhccCHHHHhhC
Confidence 999999999999999874
No 397
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.97 E-value=2e-30 Score=302.26 Aligned_cols=263 Identities=19% Similarity=0.170 Sum_probs=173.1
Q ss_pred HhhccccceEEeeeceEEEEEEEecC-----CceEEEEEecccCcccHHHHHHHHHHHhcCCCCCcceeeeE------Ee
Q 002278 614 STENLSEKYIVGYGASSTVYKCALKN-----SRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGY------AL 682 (943)
Q Consensus 614 ~~~~~~~~~~lG~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~------~~ 682 (943)
..++|...+.||+|+||.||+|.+.. +..||+|++...... +....| .++...+.+++.+... ..
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~--e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~ 205 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAV--EIWMNE--RVRRACPNSCADFVYGFLEPVSSK 205 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchh--HHHHHH--HHHhhchhhHHHHHHhhhcccccc
Confidence 56789999999999999999999764 588999987543211 111111 1122222222222221 23
Q ss_pred cCCcceEEEEEccCCChhhhccCCCCC-----------------ccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCC
Q 002278 683 SPYGNLLFYDYMVNGSLWDLLHGPSKK-----------------VKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVK 745 (943)
Q Consensus 683 ~~~~~~lv~e~~~~g~L~~~l~~~~~~-----------------~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk 745 (943)
.+...++||||+.+++|.+++...... .......+..++.|++.||+|||+. +|+|||||
T Consensus 206 ~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~---gIiHRDLK 282 (566)
T PLN03225 206 KEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHST---GIVHRDVK 282 (566)
T ss_pred cCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHC---CEEeCcCC
Confidence 456789999999999999988632110 0112344667999999999999999 99999999
Q ss_pred CccEEECC-CCceeecccccccccCCCCCceeeeEecccceeCccccccC----------------------CCCCcchh
Q 002278 746 SSNILIDE-NFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTS----------------------RLNEKSDV 802 (943)
Q Consensus 746 p~Nill~~-~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----------------------~~~~~~Dv 802 (943)
|+|||+++ ++.+||+|||+|+.+............|++.|+|||.+... .++.++||
T Consensus 283 P~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DV 362 (566)
T PLN03225 283 PQNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDI 362 (566)
T ss_pred HHHEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCccc
Confidence 99999985 57999999999987654433334456789999999965422 23456799
Q ss_pred hhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccc----cccccCcccccC----ccC-HHHHHHHHHHHHHccCCCCCC
Q 002278 803 YSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNT----VMEAVDPEVSVT----CVD-LSAVRKTFQLALLCTKRYPSE 873 (943)
Q Consensus 803 wSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~----~~~-~~~~~~l~~l~~~cl~~dP~~ 873 (943)
||+||++|||+++..|++.. ...+.......+. +.....+..... ... ........+++..|++.||++
T Consensus 363 wSlGviL~el~~~~~~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~k 440 (566)
T PLN03225 363 YSAGLIFLQMAFPNLRSDSN--LIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKGRQ 440 (566)
T ss_pred HHHHHHHHHHHhCcCCCchH--HHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCCccc
Confidence 99999999999977665432 2222221111110 001111110000 000 001123458999999999999
Q ss_pred CCCHHHHHHHHh
Q 002278 874 RPTMQEVARVLV 885 (943)
Q Consensus 874 RPt~~el~~~L~ 885 (943)
|||+.++++|-+
T Consensus 441 R~ta~e~L~Hpf 452 (566)
T PLN03225 441 RISAKAALAHPY 452 (566)
T ss_pred CCCHHHHhCCcC
Confidence 999999999854
No 398
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=8.7e-31 Score=281.07 Aligned_cols=209 Identities=21% Similarity=0.272 Sum_probs=175.8
Q ss_pred hhccccceEEeeeceEEEEEEEecC-CceEEEEEecccC---cccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEE
Q 002278 615 TENLSEKYIVGYGASSTVYKCALKN-SRPIAVKKLYNQY---PHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLF 690 (943)
Q Consensus 615 ~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 690 (943)
..-|..++.||-|+||.|.++...+ ...||.|.+.+.+ ......+..|.++|.....+-||++|-.|.+.+..|+|
T Consensus 628 KSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFV 707 (1034)
T KOG0608|consen 628 KSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFV 707 (1034)
T ss_pred ccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEE
Confidence 3457788899999999999998554 4567999887654 23345677899999999999999999999999999999
Q ss_pred EEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCC
Q 002278 691 YDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPT 770 (943)
Q Consensus 691 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~ 770 (943)
|+|++||++..+|- +.+.|++.-+..++..+..|+++.|.. |+|||||||+|||+|.+|++||.|||+++-+..
T Consensus 708 MdYIPGGDmMSLLI---rmgIFeE~LARFYIAEltcAiesVHkm---GFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRW 781 (1034)
T KOG0608|consen 708 MDYIPGGDMMSLLI---RMGIFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRW 781 (1034)
T ss_pred EeccCCccHHHHHH---HhccCHHHHHHHHHHHHHHHHHHHHhc---cceecccCccceEEccCCceeeeecccccccee
Confidence 99999999999986 456788888888999999999999999 999999999999999999999999999864311
Q ss_pred --------CCCce---------------------------------eeeEecccceeCccccccCCCCCcchhhhHHHHH
Q 002278 771 --------AMPHA---------------------------------STFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVL 809 (943)
Q Consensus 771 --------~~~~~---------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil 809 (943)
...+. ....+||+.|+|||++....|+.-+|.||.||||
T Consensus 782 THdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil 861 (1034)
T KOG0608|consen 782 THDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVIL 861 (1034)
T ss_pred ccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHH
Confidence 00000 0114699999999999999999999999999999
Q ss_pred HHHHhCCCCCCCCccHHHHH
Q 002278 810 LEILTGKKAVDNESNLHQLI 829 (943)
Q Consensus 810 ~elltG~~p~~~~~~~~~~~ 829 (943)
|||+.|++||......+...
T Consensus 862 ~em~~g~~pf~~~tp~~tq~ 881 (1034)
T KOG0608|consen 862 YEMLVGQPPFLADTPGETQY 881 (1034)
T ss_pred HHHhhCCCCccCCCCCccee
Confidence 99999999998766554433
No 399
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=7.3e-32 Score=262.10 Aligned_cols=258 Identities=24% Similarity=0.316 Sum_probs=198.8
Q ss_pred cceEEeeeceEEEEEEEec-CCceEEEEEecccCc--ccHHHHHHHHHHHhcCCCCCcceeeeEEecCC-----cceEEE
Q 002278 620 EKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQYP--HNLREFETELETIGSIRHRNIVSLHGYALSPY-----GNLLFY 691 (943)
Q Consensus 620 ~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~~~lv~ 691 (943)
..+.||.|+||.||.+++. +|+.||.|++..... .+.+.+.+|+.++..++|.||...++...... +.|++.
T Consensus 57 PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~T 136 (449)
T KOG0664|consen 57 PDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVLT 136 (449)
T ss_pred CCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHHH
Confidence 4567999999999999864 789999999865432 34567889999999999999999988875442 457788
Q ss_pred EEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCC
Q 002278 692 DYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTA 771 (943)
Q Consensus 692 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~ 771 (943)
|.+ ..+|..++- ....++...+.-+.+||++||.|||+. +|.||||||.|.+++++...||+|||+|+..+..
T Consensus 137 ELm-QSDLHKIIV---SPQ~Ls~DHvKVFlYQILRGLKYLHsA---~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d 209 (449)
T KOG0664|consen 137 ELM-QSDLHKIIV---SPQALTPDHVKVFVYQILRGLKYLHTA---NILHRDIKPGNLLVNSNCILKICDFGLARTWDQR 209 (449)
T ss_pred HHH-Hhhhhheec---cCCCCCcchhhhhHHHHHhhhHHHhhc---chhhccCCCccEEeccCceEEecccccccccchh
Confidence 877 457777775 556789999999999999999999999 9999999999999999999999999999987665
Q ss_pred CCceeeeEecccceeCccccccC-CCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhcccccc-ccc--------
Q 002278 772 MPHASTFVLGTIGYIDPEYAHTS-RLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTV-MEA-------- 841 (943)
Q Consensus 772 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~-~~~-------- 841 (943)
.....+..+-|..|+|||++.|. .|+.+.||||.||++.|++..+..|....+..++..+...-+.. .+.
T Consensus 210 ~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGA 289 (449)
T KOG0664|consen 210 DRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGA 289 (449)
T ss_pred hhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhh
Confidence 55555555578999999999885 58999999999999999999988888766666554433322211 100
Q ss_pred ---------cCccccc----CccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 002278 842 ---------VDPEVSV----TCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLV 885 (943)
Q Consensus 842 ---------~~~~~~~----~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~ 885 (943)
..|.++. ...+ ..-..-..+...+++.||++|.+..+.+.++-
T Consensus 290 k~H~LR~~~k~Ps~~vLYtlsS~~-~~~heav~~~~~~l~~d~dkris~~~A~~~~~ 345 (449)
T KOG0664|consen 290 KNHVLRAGLRAPDTQRLYKIASPD-DKNHEAVDLLQKLLHFDPDKRISVEEALQHRY 345 (449)
T ss_pred HHHhhccCCCCCCccceeeecCCc-ccchHHHHHHHHHhCCCCcccccHhhhccccc
Confidence 1111111 1111 11123446778899999999999999888753
No 400
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.97 E-value=2.4e-31 Score=296.38 Aligned_cols=246 Identities=24% Similarity=0.346 Sum_probs=188.7
Q ss_pred cccceEEeeeceEE-EEEEEecCCceEEEEEecccCcccHHHHHHHHHHHhcC-CCCCcceeeeEEecCCcceEEEEEcc
Q 002278 618 LSEKYIVGYGASST-VYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSI-RHRNIVSLHGYALSPYGNLLFYDYMV 695 (943)
Q Consensus 618 ~~~~~~lG~G~~g~-Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~ 695 (943)
|...+++|.|+.|+ ||+|... ++.||||++... ...-..+|++.++.- +|||||++|+.-.++...||..|.|
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~ye-~R~VAVKrll~e---~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC- 585 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVYE-GREVAVKRLLEE---FFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELC- 585 (903)
T ss_pred eccHHHcccCCCCcEEEEEeeC-CceehHHHHhhH---hHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHh-
Confidence 44445789999988 7899876 789999998643 335667899999988 4999999999988899999999998
Q ss_pred CCChhhhccCC-CCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECC---C--CceeecccccccccC
Q 002278 696 NGSLWDLLHGP-SKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDE---N--FDAHLSDFGIARCIP 769 (943)
Q Consensus 696 ~g~L~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~---~--~~~kl~DFGla~~~~ 769 (943)
..+|.|+++.. ...........+.+..|++.|+++||+. +||||||||.|||++. + .+++|+|||+++.++
T Consensus 586 ~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl---~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~ 662 (903)
T KOG1027|consen 586 ACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSL---KIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLA 662 (903)
T ss_pred hhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhc---ccccccCCCceEEEEccCCCcceeEEecccccccccC
Confidence 56999999752 1111111144577889999999999998 9999999999999975 3 469999999999986
Q ss_pred CCCCce--eeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCccHHHHHHHhccccccccccCccc
Q 002278 770 TAMPHA--STFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKADDNTVMEAVDPEV 846 (943)
Q Consensus 770 ~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 846 (943)
.+.... .....||-+|+|||++.....+.++||||+||++|+.++ |.+||++.- ++-..+......... +.+..
T Consensus 663 ~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~--~R~~NIl~~~~~L~~-L~~~~ 739 (903)
T KOG1027|consen 663 GGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSL--ERQANILTGNYTLVH-LEPLP 739 (903)
T ss_pred CCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchH--HhhhhhhcCccceee-eccCc
Confidence 553321 334569999999999999988999999999999999999 599998643 222222222222111 11111
Q ss_pred ccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002278 847 SVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARV 883 (943)
Q Consensus 847 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~ 883 (943)
++ ...++|.+|+++||..||+|.+|+.|
T Consensus 740 -------d~--eA~dLI~~ml~~dP~~RPsa~~VL~H 767 (903)
T KOG1027|consen 740 -------DC--EAKDLISRMLNPDPQLRPSATDVLNH 767 (903)
T ss_pred -------hH--HHHHHHHHhcCCCcccCCCHHHHhCC
Confidence 11 45689999999999999999999887
No 401
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=2.9e-30 Score=257.60 Aligned_cols=243 Identities=20% Similarity=0.303 Sum_probs=192.5
Q ss_pred hhccccceEEeeeceEEEEEEEecC-CceEEEEEecccC---cccHHHHHHHHHHHhcC-CCCCcceeeeEEecCCcceE
Q 002278 615 TENLSEKYIVGYGASSTVYKCALKN-SRPIAVKKLYNQY---PHNLREFETELETIGSI-RHRNIVSLHGYALSPYGNLL 689 (943)
Q Consensus 615 ~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 689 (943)
...|...++||+|+|+.|..++++. .+.||+|++++.. .+...-++.|-.+..+. +||.+|.++.+|+.....++
T Consensus 249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlff 328 (593)
T KOG0695|consen 249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFF 328 (593)
T ss_pred cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEE
Confidence 4578889999999999999999764 6778999887653 33444567777777665 69999999999999999999
Q ss_pred EEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccC
Q 002278 690 FYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIP 769 (943)
Q Consensus 690 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~ 769 (943)
|.||++||+|.-+++ +..+++++.+..+...|+-||.|||++ ||++||||..||++|+.|++|+.|+|+++.--
T Consensus 329 vieyv~ggdlmfhmq---rqrklpeeharfys~ei~lal~flh~r---giiyrdlkldnvlldaeghikltdygmcke~l 402 (593)
T KOG0695|consen 329 VIEYVNGGDLMFHMQ---RQRKLPEEHARFYSAEICLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGL 402 (593)
T ss_pred EEEEecCcceeeehh---hhhcCcHHHhhhhhHHHHHHHHHHhhc---CeeeeeccccceEEccCCceeecccchhhcCC
Confidence 999999999988887 456799999999999999999999999 99999999999999999999999999997432
Q ss_pred CCCCceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCC------CccHHHHHHHhccccccccccC
Q 002278 770 TAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDN------ESNLHQLIMSKADDNTVMEAVD 843 (943)
Q Consensus 770 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~------~~~~~~~~~~~~~~~~~~~~~~ 843 (943)
. ....++..+|||.|.|||++.+..|...+|.|++||+++||+.|+.||+- +.+.+.+......+..+ .++
T Consensus 403 ~-~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekqi--rip 479 (593)
T KOG0695|consen 403 G-PGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQI--RIP 479 (593)
T ss_pred C-CCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhcc--ccc
Confidence 2 23345567899999999999999999999999999999999999999971 11222221111111110 011
Q ss_pred cccccCccCHHHHHHHHHHHHHccCCCCCCCC
Q 002278 844 PEVSVTCVDLSAVRKTFQLALLCTKRYPSERP 875 (943)
Q Consensus 844 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP 875 (943)
..++ .+...+++.-+.+||.+|-
T Consensus 480 rsls---------vkas~vlkgflnkdp~erl 502 (593)
T KOG0695|consen 480 RSLS---------VKASHVLKGFLNKDPKERL 502 (593)
T ss_pred ceee---------hhhHHHHHHhhcCCcHHhc
Confidence 1111 2334678888999999985
No 402
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.96 E-value=1.6e-30 Score=243.49 Aligned_cols=213 Identities=25% Similarity=0.307 Sum_probs=170.4
Q ss_pred HHhhccccceEEeeeceEEEEEEEec-CCceEEEEEecccCc-ccHHHHHHHHHHHh-cCCCCCcceeeeEEecCCcceE
Q 002278 613 RSTENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQYP-HNLREFETELETIG-SIRHRNIVSLHGYALSPYGNLL 689 (943)
Q Consensus 613 ~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~-~l~h~niv~l~~~~~~~~~~~l 689 (943)
...+.+.....||+|++|.|-+-++. +|...|+|++..... +..++..+|+.+.. ...+|.+|.+||........+|
T Consensus 43 V~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwI 122 (282)
T KOG0984|consen 43 VPADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWI 122 (282)
T ss_pred cchhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEE
Confidence 34455556667999999999888866 578889999976543 34456778888754 4479999999999999999999
Q ss_pred EEEEccCCChhhhcc-CCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeeccccccccc
Q 002278 690 FYDYMVNGSLWDLLH-GPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCI 768 (943)
Q Consensus 690 v~e~~~~g~L~~~l~-~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~ 768 (943)
.||.|. -||..+-. .....+..++.-+-+||..+.+||.|||++. .++|||+||+|||++.+|+||+||||.+-.+
T Consensus 123 cME~M~-tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL--~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L 199 (282)
T KOG0984|consen 123 CMELMD-TSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKL--SVIHRDVKPSNILINYDGQVKICDFGISGYL 199 (282)
T ss_pred eHHHhh-hhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHh--hhhhccCCcceEEEccCCcEEEcccccceee
Confidence 999984 46655432 1224567899999999999999999999974 8999999999999999999999999999877
Q ss_pred CCCCCceeeeEecccceeCcccccc----CCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHH
Q 002278 769 PTAMPHASTFVLGTIGYIDPEYAHT----SRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIM 830 (943)
Q Consensus 769 ~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~ 830 (943)
.++... +.-.|-..|||||.+.. ..|+.|+||||+|+++.||.+++.||+......+...
T Consensus 200 ~dSiAk--t~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tpF~qLk 263 (282)
T KOG0984|consen 200 VDSIAK--TMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTPFQQLK 263 (282)
T ss_pred hhhhHH--HHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCHHHHHH
Confidence 654332 22347789999998754 4689999999999999999999999997655444433
No 403
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.96 E-value=1.9e-29 Score=252.35 Aligned_cols=258 Identities=24% Similarity=0.285 Sum_probs=204.3
Q ss_pred hhccccceEEeeeceEEEEEEEec-CCceEEEEEecccC--cccHHHHHHHHHHHhcCCCCCcceeeeEEecCC------
Q 002278 615 TENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQY--PHNLREFETELETIGSIRHRNIVSLHGYALSPY------ 685 (943)
Q Consensus 615 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------ 685 (943)
..+|.....+|.|+- .|..|.+. .+++||+|++.... ....++..+|...+..+.|+||++++.+|.-..
T Consensus 16 ~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~ 94 (369)
T KOG0665|consen 16 PKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQ 94 (369)
T ss_pred eeeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHH
Confidence 356777778899998 66666654 57899999985442 345677889999999999999999999986543
Q ss_pred cceEEEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccc
Q 002278 686 GNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIA 765 (943)
Q Consensus 686 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla 765 (943)
+.|+|||+| .++|...+. ..++-+++..+..|++.|++|||+. +|+||||||+||++..++.+||.|||+|
T Consensus 95 e~y~v~e~m-~~nl~~vi~-----~elDH~tis~i~yq~~~~ik~lhs~---~IihRdLkPsnivv~~~~~lKi~dfg~a 165 (369)
T KOG0665|consen 95 EVYLVMELM-DANLCQVIL-----MELDHETISYILYQMLCGIKHLHSA---GIIHRDLKPSNIVVNSDCTLKILDFGLA 165 (369)
T ss_pred hHHHHHHhh-hhHHHHHHH-----HhcchHHHHHHHHHHHHHHHHHHhc---ceeecccCcccceecchhheeeccchhh
Confidence 469999998 568877764 3467788999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccC--
Q 002278 766 RCIPTAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVD-- 843 (943)
Q Consensus 766 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~-- 843 (943)
+..... ...+..+.|..|.|||++.+..+.+.+||||+||++.||++|+.-|.+.+...+|.++....+...+.+.
T Consensus 166 r~e~~~--~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~q 243 (369)
T KOG0665|consen 166 RTEDTD--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQ 243 (369)
T ss_pred cccCcc--cccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHH
Confidence 865443 3456677899999999999988999999999999999999999999999888888877655443221110
Q ss_pred ------------cc--------------cccCcc-CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 002278 844 ------------PE--------------VSVTCV-DLSAVRKTFQLALLCTKRYPSERPTMQEVARVL 884 (943)
Q Consensus 844 ------------~~--------------~~~~~~-~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L 884 (943)
|. ++.... .........+++.+|+..+|++|.+++++++|-
T Consensus 244 L~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~HP 311 (369)
T KOG0665|consen 244 LQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRHP 311 (369)
T ss_pred hhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcCC
Confidence 00 000000 001223456789999999999999999999984
No 404
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.96 E-value=4.7e-29 Score=237.03 Aligned_cols=256 Identities=21% Similarity=0.227 Sum_probs=201.1
Q ss_pred hhccccceEEeeeceEEEEEEEe-cCCceEEEEEecccCcccHHHHHHHHHHHhcCC-CCCcceeeeEEecCC--cceEE
Q 002278 615 TENLSEKYIVGYGASSTVYKCAL-KNSRPIAVKKLYNQYPHNLREFETELETIGSIR-HRNIVSLHGYALSPY--GNLLF 690 (943)
Q Consensus 615 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~--~~~lv 690 (943)
.++|++.+.+|+|.++.||.|.. .+.++++||.++. ...+.+.+|+.+++.+. ||||+++++...++. ...++
T Consensus 37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKP---VkkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLi 113 (338)
T KOG0668|consen 37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKP---VKKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLI 113 (338)
T ss_pred cchHHHHHHHcCccHhhHhcccccCCCceEEEeeech---HHHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhH
Confidence 45788889999999999999984 4678899998864 34578999999999997 999999999987754 45799
Q ss_pred EEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECC-CCceeecccccccccC
Q 002278 691 YDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDE-NFDAHLSDFGIARCIP 769 (943)
Q Consensus 691 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~-~~~~kl~DFGla~~~~ 769 (943)
+||+.+.+...+- ..++..++..++.+++.||.|+|+. ||.|||+||.|+|+|. .-..+++|+|+|.++.
T Consensus 114 FE~v~n~Dfk~ly------~tl~d~dIryY~~elLkALdyCHS~---GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYH 184 (338)
T KOG0668|consen 114 FEYVNNTDFKQLY------PTLTDYDIRYYIYELLKALDYCHSM---GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYH 184 (338)
T ss_pred hhhhccccHHHHh------hhhchhhHHHHHHHHHHHHhHHHhc---CcccccCCcceeeechhhceeeeeecchHhhcC
Confidence 9999888776654 3578888999999999999999999 9999999999999995 4569999999999886
Q ss_pred CCCCceeeeEecccceeCcccccc-CCCCCcchhhhHHHHHHHHHhCCCCCC-CCccHHHHHHHhccccc---------c
Q 002278 770 TAMPHASTFVLGTIGYIDPEYAHT-SRLNEKSDVYSFGIVLLEILTGKKAVD-NESNLHQLIMSKADDNT---------V 838 (943)
Q Consensus 770 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltG~~p~~-~~~~~~~~~~~~~~~~~---------~ 838 (943)
.... ....+.+..|--||.+.. ..|+..-|+|||||++..|+..+.||- +.++.++++++...-+. .
T Consensus 185 p~~e--YnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY 262 (338)
T KOG0668|consen 185 PGKE--YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKY 262 (338)
T ss_pred CCce--eeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHH
Confidence 5433 233457788899998876 458899999999999999999888874 66777777776543322 1
Q ss_pred ccccCccccc---------------CccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 002278 839 MEAVDPEVSV---------------TCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVL 884 (943)
Q Consensus 839 ~~~~~~~~~~---------------~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L 884 (943)
.-.++|.+.. .....-...+..+++...+..|-.+|+|++|.++|-
T Consensus 263 ~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~Hp 323 (338)
T KOG0668|consen 263 QIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAHP 323 (338)
T ss_pred ccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcCc
Confidence 1112332211 000011124667899999999999999999998873
No 405
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.95 E-value=3.6e-29 Score=271.63 Aligned_cols=255 Identities=24% Similarity=0.316 Sum_probs=213.0
Q ss_pred HhhccccceEEeeeceEEEEEEEec-CCceEEEEEecccCcccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEE
Q 002278 614 STENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYD 692 (943)
Q Consensus 614 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 692 (943)
..++|.....+|.|.||.||+|+++ .++..|+|.++-......+..++|+-+++..+|||||.++|.+...+..++.||
T Consensus 13 P~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicME 92 (829)
T KOG0576|consen 13 PQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICME 92 (829)
T ss_pred CccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEE
Confidence 3457888899999999999999976 578889999987767778888999999999999999999999999999999999
Q ss_pred EccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCC
Q 002278 693 YMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAM 772 (943)
Q Consensus 693 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~ 772 (943)
||.+|+|.|.-+ ..+++++.++..+.+...+|++|||+. +-+|||||-.||++++.|.+|++|||.+..+....
T Consensus 93 ycgggslQdiy~---~TgplselqiayvcRetl~gl~ylhs~---gk~hRdiKGanilltd~gDvklaDfgvsaqitati 166 (829)
T KOG0576|consen 93 YCGGGSLQDIYH---VTGPLSELQIAYVCRETLQGLKYLHSQ---GKIHRDIKGANILLTDEGDVKLADFGVSAQITATI 166 (829)
T ss_pred ecCCCcccceee---ecccchhHHHHHHHhhhhccchhhhcC---CcccccccccceeecccCceeecccCchhhhhhhh
Confidence 999999999876 456899999999999999999999999 88999999999999999999999999997765433
Q ss_pred CceeeeEecccceeCccccc---cCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccccC
Q 002278 773 PHASTFVLGTIGYIDPEYAH---TSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVT 849 (943)
Q Consensus 773 ~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 849 (943)
. .+...+||+.|||||+.. .+.|..++|||+.|++..|+---++|..+..++.............+...++.-
T Consensus 167 ~-KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmTkS~~qpp~lkDk~k--- 242 (829)
T KOG0576|consen 167 A-KRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMTKSGFQPPTLKDKTK--- 242 (829)
T ss_pred h-hhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHhhccCCCCCcccCCcc---
Confidence 2 233467999999999764 467999999999999999998888887766665555544444433333333322
Q ss_pred ccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002278 850 CVDLSAVRKTFQLALLCTKRYPSERPTMQEVARV 883 (943)
Q Consensus 850 ~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~ 883 (943)
....+.++++.|+.++|++||++..++.|
T Consensus 243 -----ws~~fh~fvK~altknpKkRptaeklL~h 271 (829)
T KOG0576|consen 243 -----WSEFFHNFVKGALTKNPKKRPTAEKLLQH 271 (829)
T ss_pred -----chHHHHHHHHHHhcCCCccCCChhhheec
Confidence 22456789999999999999999887654
No 406
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.95 E-value=2.7e-30 Score=264.44 Aligned_cols=422 Identities=20% Similarity=0.188 Sum_probs=273.9
Q ss_pred ccCCCcCCCCCCCEEEeeCCcccccCCCCccCCCCCcEEeccCCCcCCccchhccccccceEEEecC-cccccCCCcccC
Q 002278 53 EISPSIGDLRNLQSIDFQGNKLTGQIPDEIGNCGSLVHIELSDNSLYGDIPFSISKLKQLEFLNLKN-NQLTGPIPSTLT 131 (943)
Q Consensus 53 ~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~-n~l~~~~~~~~~ 131 (943)
++|..+- ...+.|+|..|+|+...|++|+.+.+|+.||||+|.|+.+-|.+|.+|.+|-.|-+-+ |+|+....+.|.
T Consensus 60 eVP~~LP--~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~ 137 (498)
T KOG4237|consen 60 EVPANLP--PETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFG 137 (498)
T ss_pred cCcccCC--CcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhh
Confidence 4555443 2567888999999977777899999999999999999988888999998887776666 888877777888
Q ss_pred CCCCCcEEEEeccccccccchhccccccceeccccCCccCCCCCcccccccccceeeccceecccccCCCCcCCCcccEE
Q 002278 132 QIPNLKTLDLARNQLTGEIPRLIYWNEVLQYLGLRGNALTGMLSPDMCQLTGLWYFDVRGNNLTGTIPDSIGNCTSFEIL 211 (943)
Q Consensus 132 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~l~~l~~L~~L 211 (943)
+|..|+.|.+.-|++.....+.|..+++|..|.+.+|.+..+..++|..+..++.+++..|.+- ...+++.+..
T Consensus 138 gL~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~i-----cdCnL~wla~- 211 (498)
T KOG4237|consen 138 GLSSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFI-----CDCNLPWLAD- 211 (498)
T ss_pred hHHHHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCccc-----cccccchhhh-
Confidence 8999999999999988888888888889999999999988888888888888888888888732 1122222221
Q ss_pred EeecccccCcCCCCCCcceEeEEEecCccccccCCcccccc-CCCcEEecCCCCCCCCCC-cccCCCCCcceEEecCCCC
Q 002278 212 DISYNQITGEIPYNIGFLQVATLSLQGNKLTGKIPEVIGLM-QALAVLDLSENELVGPIP-PILGNLSYTGKLYLHGNKL 289 (943)
Q Consensus 212 ~Ls~N~l~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~l-~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~L~~n~l 289 (943)
++.-|.+. ..+..-..-..+.++++....+..|... .++..=-.+.+...++-| ..|..|++|+.|+|++|+|
T Consensus 212 ~~a~~~ie-----tsgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i 286 (498)
T KOG4237|consen 212 DLAMNPIE-----TSGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKI 286 (498)
T ss_pred HHhhchhh-----cccceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCcc
Confidence 11111111 0011112222333444443333333221 222221222333333444 4577777777777777777
Q ss_pred CCCCCCCcCCCCcCcEEEcccCccccccccccCCcccceEEEccccccCCcCcccccCCCcCcEEEeeCCcccCc-cccc
Q 002278 290 TGPIPPELGNMSKLSYLQLQNNQLVGTIPAELGKLEQLFELNLADNNLEGPIPHNISSCTALNQFNVHGNRLSGA-IPSS 368 (943)
Q Consensus 290 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~~~~ 368 (943)
+++-+.+|.++.+++.|.|..|+|..+....|.++..|+.|+|.+|+|+...|.+|..+..|.+|+|-.|.+.-- --.+
T Consensus 287 ~~i~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~CnC~l~w 366 (498)
T KOG4237|consen 287 TRIEDGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFNCNCRLAW 366 (498)
T ss_pred chhhhhhhcchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCcccCccchHH
Confidence 777777777777777777777777766666777777777777777777777777777777777777777766310 0011
Q ss_pred ccccCccceeeccCCcCCCCCCCCCCCCCCccEEecCCCcCCC---ccCCCc---------ccccccc-eeecccccccc
Q 002278 369 FRNLGSLTYLNLSRNNFKGKVPTELGRIINLDTLDLSVNNFSG---SVPASI---------GDLEHLL-TLNLSRNHLNG 435 (943)
Q Consensus 369 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~---~~~~~~---------~~l~~L~-~L~Ls~N~l~~ 435 (943)
+.. .|.++.-.|..| -+....++.+.++++.+.. ..|+.. ..++-+. ....|++.++
T Consensus 367 l~~-------Wlr~~~~~~~~~--Cq~p~~~~~~~~~dv~~~~~~c~~~ee~~~~~s~~cP~~c~c~~tVvRcSnk~lk- 436 (498)
T KOG4237|consen 367 LGE-------WLRKKSVVGNPR--CQSPGFVRQIPISDVAFGDFRCGGPEELGCLTSSPCPPPCTCLDTVVRCSNKLLK- 436 (498)
T ss_pred HHH-------HHhhCCCCCCCC--CCCCchhccccchhccccccccCCccccCCCCCCCCCCCcchhhhhHhhcccchh-
Confidence 111 111222111111 1222345555555554431 122221 1223343 3455555565
Q ss_pred cCCccccCCCccceecccCccccccCChhhhcccccceecccCcccCCCCCCcCccccCCcccccCCc
Q 002278 436 LLPAEFGNLRSIQTIDMSFNQLSGSIPAELGQLQNIISLILNNNNLQGGIPDQLSNCFSLSNLNVSYN 503 (943)
Q Consensus 436 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N 503 (943)
.+|..+. ..-.+|++.+|.++ .+|.+ .+.+| .++|++|++...--..|.++++|.+|-||+|
T Consensus 437 ~lp~~iP--~d~telyl~gn~~~-~vp~~--~~~~l-~~dls~n~i~~Lsn~tf~n~tql~tlilsyn 498 (498)
T KOG4237|consen 437 LLPRGIP--VDVTELYLDGNAIT-SVPDE--LLRSL-LLDLSNNRISSLSNYTFSNMTQLSTLILSYN 498 (498)
T ss_pred hcCCCCC--chhHHHhcccchhc-ccCHH--HHhhh-hcccccCceehhhcccccchhhhheeEEecC
Confidence 5665554 45678999999999 78887 67788 8999999999777778899999999999887
No 407
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.95 E-value=1e-28 Score=263.72 Aligned_cols=197 Identities=23% Similarity=0.352 Sum_probs=168.7
Q ss_pred hccccceEEeeeceEEEEEEEecC-CceEEEEEecccC--------cccHHHHHHHHHHHhcCC---CCCcceeeeEEec
Q 002278 616 ENLSEKYIVGYGASSTVYKCALKN-SRPIAVKKLYNQY--------PHNLREFETELETIGSIR---HRNIVSLHGYALS 683 (943)
Q Consensus 616 ~~~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~ 683 (943)
..|+....+|.|+||.|+.|.++. ...|++|.+.+.. ......+-.|+++|..++ |+||++++++|++
T Consensus 561 s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEd 640 (772)
T KOG1152|consen 561 SDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFED 640 (772)
T ss_pred ccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeec
Confidence 458888999999999999999875 4678888876543 112224557999999997 9999999999999
Q ss_pred CCcceEEEEEcc-CCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeeccc
Q 002278 684 PYGNLLFYDYMV-NGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDF 762 (943)
Q Consensus 684 ~~~~~lv~e~~~-~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DF 762 (943)
++.+|++||-.. +-+|.+++. .+..+++..+..|+.||+.|+++||+. +|||||||-+||.++.+|-+||+||
T Consensus 641 dd~yyl~te~hg~gIDLFd~IE---~kp~m~E~eAk~IFkQV~agi~hlh~~---~ivhrdikdenvivd~~g~~klidf 714 (772)
T KOG1152|consen 641 DDYYYLETEVHGEGIDLFDFIE---FKPRMDEPEAKLIFKQVVAGIKHLHDQ---GIVHRDIKDENVIVDSNGFVKLIDF 714 (772)
T ss_pred CCeeEEEecCCCCCcchhhhhh---ccCccchHHHHHHHHHHHhcccccccc---CceecccccccEEEecCCeEEEeec
Confidence 999999999864 458999987 566799999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCCCceeeeEecccceeCccccccCCC-CCcchhhhHHHHHHHHHhCCCCCCC
Q 002278 763 GIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRL-NEKSDVYSFGIVLLEILTGKKAVDN 821 (943)
Q Consensus 763 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGvil~elltG~~p~~~ 821 (943)
|.|.....+. ....+||..|.|||++.|.+| +..-|||++|++||.++....||++
T Consensus 715 gsaa~~ksgp---fd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyyn 771 (772)
T KOG1152|consen 715 GSAAYTKSGP---FDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYYN 771 (772)
T ss_pred cchhhhcCCC---cceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCcC
Confidence 9998664432 234579999999999999876 4678999999999999999999864
No 408
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=1.5e-27 Score=250.73 Aligned_cols=132 Identities=23% Similarity=0.325 Sum_probs=110.6
Q ss_pred hhccccceEEeeeceEEEEEEEecC-CceEEEEEecccCcccHHHHHHHHHHHhcCC-----C---CCcceeeeEEec--
Q 002278 615 TENLSEKYIVGYGASSTVYKCALKN-SRPIAVKKLYNQYPHNLREFETELETIGSIR-----H---RNIVSLHGYALS-- 683 (943)
Q Consensus 615 ~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----h---~niv~l~~~~~~-- 683 (943)
..+|.+.++||.|.|++||+|.+.. .+.||+|+.+. .....+....|+++|++++ | .+||++++.|..
T Consensus 77 ~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKS-AqhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsG 155 (590)
T KOG1290|consen 77 GGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKS-AQHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSG 155 (590)
T ss_pred CceEEEEEeccccccceeEEEeeccCCeEEEEEEEeh-hhHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecC
Confidence 3688899999999999999999764 57788888753 3455567788999999883 3 369999999965
Q ss_pred --CCcceEEEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEE
Q 002278 684 --PYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILI 751 (943)
Q Consensus 684 --~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill 751 (943)
+.+.++|+|++ |.+|..++... ....++...+.+|++||+.||.|||++| +|+|-||||+|||+
T Consensus 156 pNG~HVCMVfEvL-GdnLLklI~~s-~YrGlpl~~VK~I~~qvL~GLdYLH~ec--gIIHTDlKPENvLl 221 (590)
T KOG1290|consen 156 PNGQHVCMVFEVL-GDNLLKLIKYS-NYRGLPLSCVKEICRQVLTGLDYLHREC--GIIHTDLKPENVLL 221 (590)
T ss_pred CCCcEEEEEehhh-hhHHHHHHHHh-CCCCCcHHHHHHHHHHHHHHHHHHHHhc--CccccCCCcceeee
Confidence 34679999998 77888888643 3445899999999999999999999998 99999999999997
No 409
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.95 E-value=9.3e-28 Score=234.02 Aligned_cols=251 Identities=18% Similarity=0.259 Sum_probs=185.8
Q ss_pred HhhccccceEEeeeceEEEEEEEecC-CceEEEEEecccCcccHHHHHHHHHHHhcCC-CCCcceeeeE-EecCCcceEE
Q 002278 614 STENLSEKYIVGYGASSTVYKCALKN-SRPIAVKKLYNQYPHNLREFETELETIGSIR-HRNIVSLHGY-ALSPYGNLLF 690 (943)
Q Consensus 614 ~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~-~~~~~~~~lv 690 (943)
-.+.|++.+.+|+|.||.+-+|+++. .+.+|+|.+.+. ....++|.+|...--.+. |.||+.-|++ |+..+..+++
T Consensus 22 l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p-~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~ 100 (378)
T KOG1345|consen 22 LEDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRP-QTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFV 100 (378)
T ss_pred hhhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcc-hhhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEe
Confidence 34678888899999999999999885 466788877554 345688999998765664 8999988776 5667778899
Q ss_pred EEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEEC--CCCceeeccccccccc
Q 002278 691 YDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILID--ENFDAHLSDFGIARCI 768 (943)
Q Consensus 691 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~--~~~~~kl~DFGla~~~ 768 (943)
+||++.|+|..-+. ...+-+....+++.|++.|+.|+|++ ++||||||.+|||+- +..++|+||||+.+..
T Consensus 101 qE~aP~gdL~snv~----~~GigE~~~K~v~~ql~SAi~fMHsk---nlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~ 173 (378)
T KOG1345|consen 101 QEFAPRGDLRSNVE----AAGIGEANTKKVFAQLLSAIEFMHSK---NLVHRDLKAENILIFDADFYRVKLCDFGLTRKV 173 (378)
T ss_pred eccCccchhhhhcC----cccccHHHHHHHHHHHHHHHHHhhcc---chhhcccccceEEEecCCccEEEeeeccccccc
Confidence 99999999999885 34577888899999999999999999 999999999999993 3347999999999865
Q ss_pred CCCCCceeeeEecccceeCccccccC-----CCCCcchhhhHHHHHHHHHhCCCCCCCC----ccHHHHHHHhccccccc
Q 002278 769 PTAMPHASTFVLGTIGYIDPEYAHTS-----RLNEKSDVYSFGIVLLEILTGKKAVDNE----SNLHQLIMSKADDNTVM 839 (943)
Q Consensus 769 ~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~DvwSlGvil~elltG~~p~~~~----~~~~~~~~~~~~~~~~~ 839 (943)
+..... ..-+..|.|||+.... ...+.+|||.||+++|..+||+.||+.. ..+..|........+
T Consensus 174 g~tV~~----~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk~~-- 247 (378)
T KOG1345|consen 174 GTTVKY----LEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRKNP-- 247 (378)
T ss_pred Cceehh----hhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcccCc--
Confidence 543222 2235679999976542 3567899999999999999999999732 233333333322221
Q ss_pred cccCcccccCccCHHHHHHHHHHHHHccCCCCCCCC---CHHHHHHHHh
Q 002278 840 EAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERP---TMQEVARVLV 885 (943)
Q Consensus 840 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP---t~~el~~~L~ 885 (943)
.++..+..- .....++.++-+.++|++|- +++.....+|
T Consensus 248 -~~P~~F~~f------s~~a~r~Fkk~lt~~~~drcki~~~kk~rk~~w 289 (378)
T KOG1345|consen 248 -ALPKKFNPF------SEKALRLFKKSLTPRFKDRCKIWTAKKMRKCLW 289 (378)
T ss_pred -cCchhhccc------CHHHHHHHHHhcCCcccccchhHHHHHHHHHHH
Confidence 222222211 13556788889999999994 4444444443
No 410
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.95 E-value=5.1e-28 Score=254.93 Aligned_cols=263 Identities=21% Similarity=0.175 Sum_probs=210.0
Q ss_pred HhhccccceEEeeeceEEEEEEEec-CCceEEEEEecccCcccHHHHHHHHHHHhcCC------CCCcceeeeEEecCCc
Q 002278 614 STENLSEKYIVGYGASSTVYKCALK-NSRPIAVKKLYNQYPHNLREFETELETIGSIR------HRNIVSLHGYALSPYG 686 (943)
Q Consensus 614 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~------h~niv~l~~~~~~~~~ 686 (943)
-..+|.+....|+|-|++|..|.+. .+..||||++.+. ....+.=.+|+++|++|. .-|+++++-.|....+
T Consensus 430 LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnN-E~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknH 508 (752)
T KOG0670|consen 430 LDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNN-EVMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNH 508 (752)
T ss_pred hcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecc-hHHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcce
Confidence 3467888888899999999999976 4789999999764 333445567999999994 3489999999999999
Q ss_pred ceEEEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCC-Cceeecccccc
Q 002278 687 NLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDEN-FDAHLSDFGIA 765 (943)
Q Consensus 687 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~-~~~kl~DFGla 765 (943)
.|+|+|-+ .-+|.++|+.......+....+..++.|+.-||..|-.. +|+|.||||.||||++. ..+||||||.|
T Consensus 509 LClVFE~L-slNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c---~vlHaDIKPDNiLVNE~k~iLKLCDfGSA 584 (752)
T KOG0670|consen 509 LCLVFEPL-SLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKC---GVLHADIKPDNILVNESKNILKLCDFGSA 584 (752)
T ss_pred eEEEehhh-hchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhc---CeeecccCccceEeccCcceeeeccCccc
Confidence 99999987 568999998766666788999999999999999999987 99999999999999965 45899999999
Q ss_pred cccCCCCCceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccc----
Q 002278 766 RCIPTAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEA---- 841 (943)
Q Consensus 766 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~---- 841 (943)
.+..... .+.+.-+..|.|||++.|-+|+...|+||+||+|||+.||+..|.+..+-+.+...+...++++..
T Consensus 585 ~~~~ene---itPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~KmlRK 661 (752)
T KOG0670|consen 585 SFASENE---ITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFPNKMLRK 661 (752)
T ss_pred ccccccc---ccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCcHHHhhh
Confidence 8765432 233345678999999999999999999999999999999999999877766555444444433321
Q ss_pred ---------------------------------cCcc------cc----cCccCHHHHHHHHHHHHHccCCCCCCCCCHH
Q 002278 842 ---------------------------------VDPE------VS----VTCVDLSAVRKTFQLALLCTKRYPSERPTMQ 878 (943)
Q Consensus 842 ---------------------------------~~~~------~~----~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ 878 (943)
+.|. +. ....+.....++.+++..|+..||++|.|..
T Consensus 662 gqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit~n 741 (752)
T KOG0670|consen 662 GQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRITVN 741 (752)
T ss_pred cchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcCCHH
Confidence 1110 00 1112334567888999999999999999999
Q ss_pred HHHHHH
Q 002278 879 EVARVL 884 (943)
Q Consensus 879 el~~~L 884 (943)
++++|-
T Consensus 742 qAL~Hp 747 (752)
T KOG0670|consen 742 QALKHP 747 (752)
T ss_pred HHhcCC
Confidence 998874
No 411
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.94 E-value=1.9e-26 Score=237.34 Aligned_cols=211 Identities=33% Similarity=0.498 Sum_probs=182.9
Q ss_pred EeeeceEEEEEEEecC-CceEEEEEecccCcc-cHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEEccCCChhh
Q 002278 624 VGYGASSTVYKCALKN-SRPIAVKKLYNQYPH-NLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWD 701 (943)
Q Consensus 624 lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~ 701 (943)
||+|++|.||++.... ++++++|++...... ..+.+.+|++.++.++|++|+++++++......++++|++.+++|.+
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~ 80 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD 80 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence 6899999999999864 889999998755432 35678999999999999999999999999999999999999999999
Q ss_pred hccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECC-CCceeecccccccccCCCCCceeeeEe
Q 002278 702 LLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDE-NFDAHLSDFGIARCIPTAMPHASTFVL 780 (943)
Q Consensus 702 ~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~-~~~~kl~DFGla~~~~~~~~~~~~~~~ 780 (943)
++.... ..+++..+..++.++++++++||+. +++|+||+|.||+++. ++.++|+|||.+........ ......
T Consensus 81 ~~~~~~--~~~~~~~~~~~~~~l~~~l~~lh~~---~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~-~~~~~~ 154 (215)
T cd00180 81 LLKENE--GKLSEDEILRILLQILEGLEYLHSN---GIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS-LLKTIV 154 (215)
T ss_pred HHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc-hhhccc
Confidence 986321 4689999999999999999999999 9999999999999998 89999999999987654321 122244
Q ss_pred cccceeCccccccC-CCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccccCccCHHHHHHH
Q 002278 781 GTIGYIDPEYAHTS-RLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAVRKT 859 (943)
Q Consensus 781 gt~~y~aPE~~~~~-~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 859 (943)
+...|++||..... .++.++|+|++|++++++ ..+
T Consensus 155 ~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l--------------------------------------------~~~ 190 (215)
T cd00180 155 GTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL--------------------------------------------PEL 190 (215)
T ss_pred CCCCccChhHhcccCCCCchhhhHHHHHHHHHH--------------------------------------------HHH
Confidence 78899999999887 888999999999999999 245
Q ss_pred HHHHHHccCCCCCCCCCHHHHHHHH
Q 002278 860 FQLALLCTKRYPSERPTMQEVARVL 884 (943)
Q Consensus 860 ~~l~~~cl~~dP~~RPt~~el~~~L 884 (943)
.+++..|++.+|++||++.++++++
T Consensus 191 ~~~l~~~l~~~p~~R~~~~~l~~~~ 215 (215)
T cd00180 191 KDLIRKMLQKDPEKRPSAKEILEHL 215 (215)
T ss_pred HHHHHHHhhCCcccCcCHHHHhhCC
Confidence 6899999999999999999998753
No 412
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.94 E-value=3.2e-26 Score=238.66 Aligned_cols=198 Identities=31% Similarity=0.404 Sum_probs=173.4
Q ss_pred cccceEEeeeceEEEEEEEecC-CceEEEEEecccCcc-cHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEEcc
Q 002278 618 LSEKYIVGYGASSTVYKCALKN-SRPIAVKKLYNQYPH-NLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMV 695 (943)
Q Consensus 618 ~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 695 (943)
|...+.||+|++|.||+|.... ++.+|+|.+...... ..+.+.+|++.++.++|+|++++++++......++++||++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCE 80 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccC
Confidence 4567889999999999999875 789999998765544 56788999999999999999999999999999999999999
Q ss_pred CCChhhhccCCCCCcc-CCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCCc
Q 002278 696 NGSLWDLLHGPSKKVK-LDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPH 774 (943)
Q Consensus 696 ~g~L~~~l~~~~~~~~-l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~~ 774 (943)
+++|.+++... .. +++..+..++.+++.++.+||+. +++|+|++|.||+++.++.++|+|||.+.........
T Consensus 81 ~~~L~~~~~~~---~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~ 154 (225)
T smart00221 81 GGDLFDYLRKK---GGKLSEEEARFYLRQILEALEYLHSL---GIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAA 154 (225)
T ss_pred CCCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeeCceeeEecCcccc
Confidence 99999998632 23 78999999999999999999999 9999999999999999999999999999877554311
Q ss_pred eeeeEecccceeCcccc-ccCCCCCcchhhhHHHHHHHHHhCCCCCCC
Q 002278 775 ASTFVLGTIGYIDPEYA-HTSRLNEKSDVYSFGIVLLEILTGKKAVDN 821 (943)
Q Consensus 775 ~~~~~~gt~~y~aPE~~-~~~~~~~~~DvwSlGvil~elltG~~p~~~ 821 (943)
......++..|++||.. ....++.++|+|+||++++||++|+.||..
T Consensus 155 ~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 155 LLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred cccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 22334578899999998 667788899999999999999999999976
No 413
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.93 E-value=3.7e-26 Score=237.93 Aligned_cols=262 Identities=22% Similarity=0.272 Sum_probs=196.0
Q ss_pred HHHhhccccceEEeeeceEEEEEEEecC----CceEEEEEecccCcccHHHHHHHHHHHhcCC-CCCcceeeeEEecCCc
Q 002278 612 MRSTENLSEKYIVGYGASSTVYKCALKN----SRPIAVKKLYNQYPHNLREFETELETIGSIR-HRNIVSLHGYALSPYG 686 (943)
Q Consensus 612 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~ 686 (943)
....+.|..+++||+|.|++||+|.+.. ++.||+|.+...+ ....+..|++++..+. +.||+++.+++...+.
T Consensus 32 p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts--~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~ 109 (418)
T KOG1167|consen 32 PFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS--SPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQ 109 (418)
T ss_pred hhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeeccccc--CchHHHHHHHHHHHhccchhhhcchhhhccCCe
Confidence 3355678889999999999999998643 5789999997553 3467899999999995 8999999999999999
Q ss_pred ceEEEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEEC-CCCceeecccccc
Q 002278 687 NLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILID-ENFDAHLSDFGIA 765 (943)
Q Consensus 687 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~-~~~~~kl~DFGla 765 (943)
..+|+||++.....++.. .++...+..+++.+..||+++|+. |||||||||+|++.+ ..+.-.|.|||+|
T Consensus 110 v~ivlp~~~H~~f~~l~~------~l~~~~i~~Yl~~ll~Al~~~h~~---GIvHRDiKpsNFL~n~~t~rg~LvDFgLA 180 (418)
T KOG1167|consen 110 VAIVLPYFEHDRFRDLYR------SLSLAEIRWYLRNLLKALAHLHKN---GIVHRDIKPSNFLYNRRTQRGVLVDFGLA 180 (418)
T ss_pred eEEEecccCccCHHHHHh------cCCHHHHHHHHHHHHHHhhhhhcc---CccccCCCccccccccccCCceEEechhH
Confidence 999999999999888875 366888999999999999999999 999999999999997 5677899999999
Q ss_pred cccCCC--------------C-----------------------------CceeeeEecccceeCcccccc-CCCCCcch
Q 002278 766 RCIPTA--------------M-----------------------------PHASTFVLGTIGYIDPEYAHT-SRLNEKSD 801 (943)
Q Consensus 766 ~~~~~~--------------~-----------------------------~~~~~~~~gt~~y~aPE~~~~-~~~~~~~D 801 (943)
..++.. . ........||++|.|||++.. ...++++|
T Consensus 181 ~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiD 260 (418)
T KOG1167|consen 181 QRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAID 260 (418)
T ss_pred HHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccc
Confidence 732100 0 000112459999999999876 45889999
Q ss_pred hhhHHHHHHHHHhCCCCCCC-Ccc---HHHHHHHhc---------cccc--ccc---------------ccC-ccccc--
Q 002278 802 VYSFGIVLLEILTGKKAVDN-ESN---LHQLIMSKA---------DDNT--VME---------------AVD-PEVSV-- 848 (943)
Q Consensus 802 vwSlGvil~elltG~~p~~~-~~~---~~~~~~~~~---------~~~~--~~~---------------~~~-~~~~~-- 848 (943)
|||.||++.-+++++.||-. .++ +...+.+.. ..+. ..+ .++ ..+..
T Consensus 261 iws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~ 340 (418)
T KOG1167|consen 261 IWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSR 340 (418)
T ss_pred eeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhccccc
Confidence 99999999999999999852 222 111111110 0111 000 000 00000
Q ss_pred ----CccC-H-HHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 002278 849 ----TCVD-L-SAVRKTFQLALLCTKRYPSERPTMQEVARVL 884 (943)
Q Consensus 849 ----~~~~-~-~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L 884 (943)
...+ . ......++++.+|+..||.+|.|+++.++|-
T Consensus 341 q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHp 382 (418)
T KOG1167|consen 341 QPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHP 382 (418)
T ss_pred ccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcCc
Confidence 0000 0 1123678999999999999999999999884
No 414
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.92 E-value=2.6e-24 Score=272.36 Aligned_cols=347 Identities=20% Similarity=0.246 Sum_probs=216.4
Q ss_pred CCCcCCCCCCCEEEeeCCc------ccccCCCCccCCC-CCcEEeccCCCcCCccchhccccccceEEEecCcccccCCC
Q 002278 55 SPSIGDLRNLQSIDFQGNK------LTGQIPDEIGNCG-SLVHIELSDNSLYGDIPFSISKLKQLEFLNLKNNQLTGPIP 127 (943)
Q Consensus 55 ~~~l~~l~~L~~L~Ls~n~------l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~ 127 (943)
+.+|.++++|+.|.+..+. +...+|+.|..++ +|+.|++.+|.+. .+|..| .+.+|+.|+|++|++. .++
T Consensus 551 ~~aF~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~-~lP~~f-~~~~L~~L~L~~s~l~-~L~ 627 (1153)
T PLN03210 551 ENAFKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLR-CMPSNF-RPENLVKLQMQGSKLE-KLW 627 (1153)
T ss_pred HHHHhcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCC-CCCCcC-CccCCcEEECcCcccc-ccc
Confidence 3468889999999997654 3345777777764 5899999998887 778777 5788999999998887 677
Q ss_pred cccCCCCCCcEEEEeccccccccchhccccccceeccccCCccCCCCCcccccccccceeeccceecccccCCCCcCCCc
Q 002278 128 STLTQIPNLKTLDLARNQLTGEIPRLIYWNEVLQYLGLRGNALTGMLSPDMCQLTGLWYFDVRGNNLTGTIPDSIGNCTS 207 (943)
Q Consensus 128 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~l~~l~~ 207 (943)
..+..+++|+.|+|++|.....+|. +..+++|++|+|++|..-...|..+..+++|+.|++++|.....+|..+ ++++
T Consensus 628 ~~~~~l~~Lk~L~Ls~~~~l~~ip~-ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i-~l~s 705 (1153)
T PLN03210 628 DGVHSLTGLRNIDLRGSKNLKEIPD-LSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI-NLKS 705 (1153)
T ss_pred cccccCCCCCEEECCCCCCcCcCCc-cccCCcccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcC-CCCC
Confidence 7888888999999987754435553 6667777777777765544556667777777777777754333555544 5677
Q ss_pred ccEEEeecccccCcCCCCCCcceEeEEEecCccccccCCccccccCCCcEEecCCCCCCCCCCcccCCCCCcceEEecCC
Q 002278 208 FEILDISYNQITGEIPYNIGFLQVATLSLQGNKLTGKIPEVIGLMQALAVLDLSENELVGPIPPILGNLSYTGKLYLHGN 287 (943)
Q Consensus 208 L~~L~Ls~N~l~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n 287 (943)
|+.|++++|.....+|... .+|+.|++++|.+.. +|..+ .+++|+.|++.++.... +. +
T Consensus 706 L~~L~Lsgc~~L~~~p~~~--~nL~~L~L~~n~i~~-lP~~~-~l~~L~~L~l~~~~~~~-l~----------------~ 764 (1153)
T PLN03210 706 LYRLNLSGCSRLKSFPDIS--TNISWLDLDETAIEE-FPSNL-RLENLDELILCEMKSEK-LW----------------E 764 (1153)
T ss_pred CCEEeCCCCCCcccccccc--CCcCeeecCCCcccc-ccccc-cccccccccccccchhh-cc----------------c
Confidence 7777777765444444321 244555555555542 33322 34444544444432110 00 0
Q ss_pred CCCCCCCCCcCCCCcCcEEEcccCccccccccccCCcccceEEEccccccCCcCcccccCCCcCcEEEeeCCcccCcccc
Q 002278 288 KLTGPIPPELGNMSKLSYLQLQNNQLVGTIPAELGKLEQLFELNLADNNLEGPIPHNISSCTALNQFNVHGNRLSGAIPS 367 (943)
Q Consensus 288 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~ 367 (943)
.+....+..+...++|+.|+|++|.....+|..++++++|+.|+|++|..-+.+|..+ ++++|+.|++++|.....+|.
T Consensus 765 ~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~~L~~~p~ 843 (1153)
T PLN03210 765 RVQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-NLESLESLDLSGCSRLRTFPD 843 (1153)
T ss_pred cccccchhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-CccccCEEECCCCCccccccc
Confidence 0111111122233566666776666555666666666677777776654333455544 566677777776544333443
Q ss_pred cccccCccceeeccCCcCCCCCCCCCCCCCCccEEecCCCcCCCccCCCcccccccceeeccccc
Q 002278 368 SFRNLGSLTYLNLSRNNFKGKVPTELGRIINLDTLDLSVNNFSGSVPASIGDLEHLLTLNLSRNH 432 (943)
Q Consensus 368 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 432 (943)
. .++|+.|+|++|.++ .+|..+..+++|+.|+|++|+--..+|..+..++.|+.|++++|.
T Consensus 844 ~---~~nL~~L~Ls~n~i~-~iP~si~~l~~L~~L~L~~C~~L~~l~~~~~~L~~L~~L~l~~C~ 904 (1153)
T PLN03210 844 I---STNISDLNLSRTGIE-EVPWWIEKFSNLSFLDMNGCNNLQRVSLNISKLKHLETVDFSDCG 904 (1153)
T ss_pred c---ccccCEeECCCCCCc-cChHHHhcCCCCCEEECCCCCCcCccCcccccccCCCeeecCCCc
Confidence 2 356777777777776 566677777777777777743323566666777777777777764
No 415
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.92 E-value=4.6e-24 Score=270.03 Aligned_cols=345 Identities=23% Similarity=0.261 Sum_probs=185.6
Q ss_pred CcccCCCCCCcEEEEeccc------cccccchhcccc-ccceeccccCCccCCCCCcccccccccceeeccceecccccC
Q 002278 127 PSTLTQIPNLKTLDLARNQ------LTGEIPRLIYWN-EVLQYLGLRGNALTGMLSPDMCQLTGLWYFDVRGNNLTGTIP 199 (943)
Q Consensus 127 ~~~~~~l~~L~~L~Ls~N~------l~~~~~~~~~~l-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~ 199 (943)
+.+|.++++|+.|.+..+. +...+|..|..+ .+|+.|++.++.++.++. .| .+.+|+.|++++|++. .++
T Consensus 551 ~~aF~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~~lP~-~f-~~~~L~~L~L~~s~l~-~L~ 627 (1153)
T PLN03210 551 ENAFKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLRCMPS-NF-RPENLVKLQMQGSKLE-KLW 627 (1153)
T ss_pred HHHHhcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCCCCCC-cC-CccCCcEEECcCcccc-ccc
Confidence 4456667777777665543 222345555554 347777777777665543 33 4567777777777776 456
Q ss_pred CCCcCCCcccEEEeecccccCcCCCCCCcceEeEEEecCccccccCCccccccCCCcEEecCCCCCCCCCCcccCCCCCc
Q 002278 200 DSIGNCTSFEILDISYNQITGEIPYNIGFLQVATLSLQGNKLTGKIPEVIGLMQALAVLDLSENELVGPIPPILGNLSYT 279 (943)
Q Consensus 200 ~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 279 (943)
..+..+++|+.|+|++|.....+|......+|+.|+|++|.....+|..+..+++|+.|++++|...+.+|..+ ++++|
T Consensus 628 ~~~~~l~~Lk~L~Ls~~~~l~~ip~ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i-~l~sL 706 (1153)
T PLN03210 628 DGVHSLTGLRNIDLRGSKNLKEIPDLSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI-NLKSL 706 (1153)
T ss_pred cccccCCCCCEEECCCCCCcCcCCccccCCcccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcC-CCCCC
Confidence 66677777777777776544455554444566666666665555666667777777777777664444455444 56667
Q ss_pred ceEEecCCCCCCCCCCCcCCCCcCcEEEcccCccccccccccCCcccceEEEccccccCCcCcccccCCCcCcEEEeeCC
Q 002278 280 GKLYLHGNKLTGPIPPELGNMSKLSYLQLQNNQLVGTIPAELGKLEQLFELNLADNNLEGPIPHNISSCTALNQFNVHGN 359 (943)
Q Consensus 280 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 359 (943)
+.|+|++|...+.+|.. ..+|++|++++|.+. .+|..+ .+++|+.|++.++..... ...
T Consensus 707 ~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~-~lP~~~-~l~~L~~L~l~~~~~~~l-~~~--------------- 765 (1153)
T PLN03210 707 YRLNLSGCSRLKSFPDI---STNISWLDLDETAIE-EFPSNL-RLENLDELILCEMKSEKL-WER--------------- 765 (1153)
T ss_pred CEEeCCCCCCccccccc---cCCcCeeecCCCccc-cccccc-cccccccccccccchhhc-ccc---------------
Confidence 77777766544444432 345666666666665 444433 455666666655332110 000
Q ss_pred cccCcccccccccCccceeeccCCcCCCCCCCCCCCCCCccEEecCCCcCCCccCCCcccccccceeecccccccccCCc
Q 002278 360 RLSGAIPSSFRNLGSLTYLNLSRNNFKGKVPTELGRIINLDTLDLSVNNFSGSVPASIGDLEHLLTLNLSRNHLNGLLPA 439 (943)
Q Consensus 360 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~ 439 (943)
+....+..+...++|+.|+|++|...+.+|..++.+++|+.|++++|...+.+|..+ .+++|+.|+|++|.....+|.
T Consensus 766 -~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~~L~~~p~ 843 (1153)
T PLN03210 766 -VQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-NLESLESLDLSGCSRLRTFPD 843 (1153)
T ss_pred -ccccchhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-CccccCEEECCCCCccccccc
Confidence 000111112223445555555554444455555555555555555543333444433 445555555555433323332
Q ss_pred cccCCCccceecccCccccccCChhhhcccccceecccC-cccCCCCCCcCccccCCcccccCCc
Q 002278 440 EFGNLRSIQTIDMSFNQLSGSIPAELGQLQNIISLILNN-NNLQGGIPDQLSNCFSLSNLNVSYN 503 (943)
Q Consensus 440 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~ls~N 503 (943)
. .++|+.|+|++|.|+ .+|..+..+++|+.|+|++ |+|+ .+|..+..+++|+.++++++
T Consensus 844 ~---~~nL~~L~Ls~n~i~-~iP~si~~l~~L~~L~L~~C~~L~-~l~~~~~~L~~L~~L~l~~C 903 (1153)
T PLN03210 844 I---STNISDLNLSRTGIE-EVPWWIEKFSNLSFLDMNGCNNLQ-RVSLNISKLKHLETVDFSDC 903 (1153)
T ss_pred c---ccccCEeECCCCCCc-cChHHHhcCCCCCEEECCCCCCcC-ccCcccccccCCCeeecCCC
Confidence 2 234555555555555 4555555555555555555 3333 34444555555555555554
No 416
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.91 E-value=5.6e-27 Score=240.26 Aligned_cols=298 Identities=21% Similarity=0.201 Sum_probs=234.8
Q ss_pred ceeEecCCCCc---------EEEEEcCCCCCccccCCCcCCCCCCCEEEeeCCcccccCCCCccCCCCCcEEeccC-CCc
Q 002278 29 RGVFCDNSSLS---------VVSLNLSSLNLGGEISPSIGDLRNLQSIDFQGNKLTGQIPDEIGNCGSLVHIELSD-NSL 98 (943)
Q Consensus 29 ~gv~c~~~~~~---------v~~L~l~~~~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~-N~l 98 (943)
.-|.|.+.++. .+.++|..|+|+..-+.+|+.+++|++||||+|+|+.+-|++|.++.+|..|-+.+ |+|
T Consensus 49 ~~VdCr~~GL~eVP~~LP~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI 128 (498)
T KOG4237|consen 49 GIVDCRGKGLTEVPANLPPETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKI 128 (498)
T ss_pred ceEEccCCCcccCcccCCCcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCch
Confidence 34899877653 67899999999965556899999999999999999999999999999987776665 999
Q ss_pred CCccchhccccccceEEEecCcccccCCCcccCCCCCCcEEEEeccccccccchhccccccceeccccCCccCCCCCccc
Q 002278 99 YGDIPFSISKLKQLEFLNLKNNQLTGPIPSTLTQIPNLKTLDLARNQLTGEIPRLIYWNEVLQYLGLRGNALTGMLSPDM 178 (943)
Q Consensus 99 ~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 178 (943)
+......|++|..|+.|.+.-|++.-+..+.|..+++|..|.|-.|.+.......|..+..++.+.+..|.+.. .
T Consensus 129 ~~l~k~~F~gL~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~ic-----d 203 (498)
T KOG4237|consen 129 TDLPKGAFGGLSSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFIC-----D 203 (498)
T ss_pred hhhhhhHhhhHHHHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCcccc-----c
Confidence 96556789999999999999999998899999999999999999999996656699999999999999998542 2
Q ss_pred ccccccceeeccceecccccCCCCcCCCcccEEEeecccccCcCCCCCCcc--eE-eEEEecCccccccCCccccccCCC
Q 002278 179 CQLTGLWYFDVRGNNLTGTIPDSIGNCTSFEILDISYNQITGEIPYNIGFL--QV-ATLSLQGNKLTGKIPEVIGLMQAL 255 (943)
Q Consensus 179 ~~l~~L~~L~L~~N~i~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~--~L-~~L~L~~n~l~~~~~~~l~~l~~L 255 (943)
++++.+... +. ..|..++...-..-..+.++++..+-+.-+... .+ ..+....+....-+...|..+++|
T Consensus 204 CnL~wla~~-~a------~~~ietsgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L 276 (498)
T KOG4237|consen 204 CNLPWLADD-LA------MNPIETSGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNL 276 (498)
T ss_pred cccchhhhH-Hh------hchhhcccceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccc
Confidence 333333221 11 223334444445555555555554433333221 11 112222223332333558899999
Q ss_pred cEEecCCCCCCCCCCcccCCCCCcceEEecCCCCCCCCCCCcCCCCcCcEEEcccCccccccccccCCcccceEEEcccc
Q 002278 256 AVLDLSENELVGPIPPILGNLSYTGKLYLHGNKLTGPIPPELGNMSKLSYLQLQNNQLVGTIPAELGKLEQLFELNLADN 335 (943)
Q Consensus 256 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 335 (943)
+.|+|++|+|+++.+.+|.++..+++|+|..|+|.......|.++..|+.|+|.+|+|+...|.+|..+.+|.+|+|-.|
T Consensus 277 ~~lnlsnN~i~~i~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~N 356 (498)
T KOG4237|consen 277 RKLNLSNNKITRIEDGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSN 356 (498)
T ss_pred eEeccCCCccchhhhhhhcchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccC
Confidence 99999999999999999999999999999999999877788999999999999999999999999999999999999888
Q ss_pred ccC
Q 002278 336 NLE 338 (943)
Q Consensus 336 ~l~ 338 (943)
.+.
T Consensus 357 p~~ 359 (498)
T KOG4237|consen 357 PFN 359 (498)
T ss_pred ccc
Confidence 653
No 417
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.91 E-value=5.8e-25 Score=270.41 Aligned_cols=198 Identities=20% Similarity=0.241 Sum_probs=142.9
Q ss_pred cCCC-CCcceeeeEE-------ecCCcceEEEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCe
Q 002278 668 SIRH-RNIVSLHGYA-------LSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRI 739 (943)
Q Consensus 668 ~l~h-~niv~l~~~~-------~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i 739 (943)
.++| +||++++++| .++...+.++||+ +++|.+++.. ....+++.+++.++.||++||+|||++ +|
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~--~~~~~~~~~~~~i~~qi~~al~~lH~~---gI 101 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDN--PDRSVDAFECFHVFRQIVEIVNAAHSQ---GI 101 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhc--ccccccHHHHHHHHHHHHHHHHHHHhC---Ce
Confidence 3455 5788888877 2334566778876 6799999963 234689999999999999999999999 99
Q ss_pred EecCCCCccEEECC-------------------CCceeecccccccccCCCC---------------CceeeeEecccce
Q 002278 740 IHRDVKSSNILIDE-------------------NFDAHLSDFGIARCIPTAM---------------PHASTFVLGTIGY 785 (943)
Q Consensus 740 vH~Dlkp~Nill~~-------------------~~~~kl~DFGla~~~~~~~---------------~~~~~~~~gt~~y 785 (943)
+||||||+|||++. ++.+|++|||+++...... ........||+.|
T Consensus 102 vHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y 181 (793)
T PLN00181 102 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWY 181 (793)
T ss_pred eeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcce
Confidence 99999999999954 4556777777776432100 0001123588999
Q ss_pred eCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccccCccCHHHHHHHHHHHHH
Q 002278 786 IDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAVRKTFQLALL 865 (943)
Q Consensus 786 ~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ 865 (943)
||||++.+..++.++|||||||++|||++|.+|+............ . ..++... ........++..
T Consensus 182 ~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~~~~~~~~----~----~~~~~~~------~~~~~~~~~~~~ 247 (793)
T PLN00181 182 TSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSRTMSSLRH----R----VLPPQIL------LNWPKEASFCLW 247 (793)
T ss_pred EChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHHHHHHHHH----h----hcChhhh------hcCHHHHHHHHH
Confidence 9999999999999999999999999999999887643221111110 0 0111111 112234578889
Q ss_pred ccCCCCCCCCCHHHHHHHHh
Q 002278 866 CTKRYPSERPTMQEVARVLV 885 (943)
Q Consensus 866 cl~~dP~~RPt~~el~~~L~ 885 (943)
||+++|.+||++.|++++-+
T Consensus 248 ~L~~~P~~Rps~~eil~h~~ 267 (793)
T PLN00181 248 LLHPEPSCRPSMSELLQSEF 267 (793)
T ss_pred hCCCChhhCcChHHHhhchh
Confidence 99999999999999998765
No 418
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.91 E-value=2.3e-24 Score=215.41 Aligned_cols=170 Identities=24% Similarity=0.267 Sum_probs=128.2
Q ss_pred CChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCCcee
Q 002278 697 GSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHAS 776 (943)
Q Consensus 697 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~~~~ 776 (943)
|+|.+++.. ....+++.+++.++.|++.||+|||+. + ||+||+++.++.+|+ ||.++......
T Consensus 1 GsL~~~l~~--~~~~l~~~~~~~i~~qi~~~L~~lH~~---~------kp~Nil~~~~~~~~~--fG~~~~~~~~~---- 63 (176)
T smart00750 1 VSLADILEV--RGRPLNEEEIWAVCLQCLRALRELHRQ---A------KSGNILLTWDGLLKL--DGSVAFKTPEQ---- 63 (176)
T ss_pred CcHHHHHHH--hCCCCCHHHHHHHHHHHHHHHHHHHhc---C------CcccEeEcCccceee--ccceEeecccc----
Confidence 688998863 244699999999999999999999998 5 999999999999999 99998764432
Q ss_pred eeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccccCccCHHHH
Q 002278 777 TFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAV 856 (943)
Q Consensus 777 ~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 856 (943)
..||+.|+|||++.+..++.++|||||||++|||+||+.||.................. .. .+............
T Consensus 64 --~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~ 138 (176)
T smart00750 64 --SRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMP--AD-DPRDRSNLESVSAA 138 (176)
T ss_pred --CCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhc--cC-CccccccHHHHHhh
Confidence 14899999999999999999999999999999999999999765443322222211111 00 00000000011111
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHHHHhhcC
Q 002278 857 RKTFQLALLCTKRYPSERPTMQEVARVLVSLL 888 (943)
Q Consensus 857 ~~l~~l~~~cl~~dP~~RPt~~el~~~L~~~~ 888 (943)
..+.+++..||..+|++||++.+++++++...
T Consensus 139 ~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~ 170 (176)
T smart00750 139 RSFADFMRVCASRLPQRREAANHYLAHCRALF 170 (176)
T ss_pred hhHHHHHHHHHhcccccccCHHHHHHHHHHHH
Confidence 25889999999999999999999999987653
No 419
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.90 E-value=1.6e-23 Score=245.28 Aligned_cols=264 Identities=27% Similarity=0.357 Sum_probs=165.1
Q ss_pred EEEcCCCCCccccCCCcCCCCCCCEEEeeCCcccccCCCCccCCCCCcEEeccCCCcCCccchhccccccceEEEecCcc
Q 002278 42 SLNLSSLNLGGEISPSIGDLRNLQSIDFQGNKLTGQIPDEIGNCGSLVHIELSDNSLYGDIPFSISKLKQLEFLNLKNNQ 121 (943)
Q Consensus 42 ~L~l~~~~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~ 121 (943)
.|||+.++++ .+|+.+. ++|+.|+|++|+|+ .+|. .+++|++|+|++|+|+ .+|.. .++|+.|+|++|.
T Consensus 205 ~LdLs~~~Lt-sLP~~l~--~~L~~L~L~~N~Lt-~LP~---lp~~Lk~LdLs~N~Lt-sLP~l---p~sL~~L~Ls~N~ 273 (788)
T PRK15387 205 VLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLT-SLPVL---PPGLLELSIFSNP 273 (788)
T ss_pred EEEcCCCCCC-cCCcchh--cCCCEEEccCCcCC-CCCC---CCCCCcEEEecCCccC-cccCc---ccccceeeccCCc
Confidence 4677777777 5777665 36777777777777 4554 2467777777777777 44532 3566777777777
Q ss_pred cccCCCcccCCCCCCcEEEEeccccccccchhccccccceeccccCCccCCCCCcccccccccceeeccceecccccCCC
Q 002278 122 LTGPIPSTLTQIPNLKTLDLARNQLTGEIPRLIYWNEVLQYLGLRGNALTGMLSPDMCQLTGLWYFDVRGNNLTGTIPDS 201 (943)
Q Consensus 122 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~ 201 (943)
++ .+|..+ ++|+.|+|++|+|+. +|.. .++|++|+|++|+|++++. ...+|+.|++++|+|++ +|..
T Consensus 274 L~-~Lp~lp---~~L~~L~Ls~N~Lt~-LP~~---p~~L~~LdLS~N~L~~Lp~----lp~~L~~L~Ls~N~L~~-LP~l 340 (788)
T PRK15387 274 LT-HLPALP---SGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLASLPA----LPSELCKLWAYNNQLTS-LPTL 340 (788)
T ss_pred hh-hhhhch---hhcCEEECcCCcccc-cccc---ccccceeECCCCccccCCC----CcccccccccccCcccc-cccc
Confidence 76 344322 456667777777663 3332 3456666666666665432 12335555555555552 3321
Q ss_pred CcCCCcccEEEeecccccCcCCCCCCcceEeEEEecCccccccCCccccccCCCcEEecCCCCCCCCCCcccCCCCCcce
Q 002278 202 IGNCTSFEILDISYNQITGEIPYNIGFLQVATLSLQGNKLTGKIPEVIGLMQALAVLDLSENELVGPIPPILGNLSYTGK 281 (943)
Q Consensus 202 l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 281 (943)
..+|++|+|++|+|+ + +|.. ..+|+.|++++|+|.. +|.. ..+|+.
T Consensus 341 ---p~~Lq~LdLS~N~Ls-----------------------~-LP~l---p~~L~~L~Ls~N~L~~-LP~l---~~~L~~ 386 (788)
T PRK15387 341 ---PSGLQELSVSDNQLA-----------------------S-LPTL---PSELYKLWAYNNRLTS-LPAL---PSGLKE 386 (788)
T ss_pred ---ccccceEecCCCccC-----------------------C-CCCC---Ccccceehhhcccccc-Cccc---ccccce
Confidence 134555555555554 2 2221 2355666677776663 4432 245777
Q ss_pred EEecCCCCCCCCCCCcCCCCcCcEEEcccCccccccccccCCcccceEEEccccccCCcCcccccCCCcCcEEEeeCCcc
Q 002278 282 LYLHGNKLTGPIPPELGNMSKLSYLQLQNNQLVGTIPAELGKLEQLFELNLADNNLEGPIPHNISSCTALNQFNVHGNRL 361 (943)
Q Consensus 282 L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 361 (943)
|+|++|+|++ +|.. .++|+.|++++|++++ +|.. ..+|+.|+|++|+|+ .+|..+..+++|+.|+|++|+|
T Consensus 387 LdLs~N~Lt~-LP~l---~s~L~~LdLS~N~Lss-IP~l---~~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~N~L 457 (788)
T PRK15387 387 LIVSGNRLTS-LPVL---PSELKELMVSGNRLTS-LPML---PSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPL 457 (788)
T ss_pred EEecCCcccC-CCCc---ccCCCEEEccCCcCCC-CCcc---hhhhhhhhhccCccc-ccChHHhhccCCCeEECCCCCC
Confidence 7777777774 4432 3578888888888874 5543 246778888999988 5788888889999999999999
Q ss_pred cCccccccccc
Q 002278 362 SGAIPSSFRNL 372 (943)
Q Consensus 362 ~~~~~~~~~~l 372 (943)
++..+..+..+
T Consensus 458 s~~~~~~L~~l 468 (788)
T PRK15387 458 SERTLQALREI 468 (788)
T ss_pred CchHHHHHHHH
Confidence 87766665443
No 420
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.90 E-value=8.7e-23 Score=223.79 Aligned_cols=262 Identities=18% Similarity=0.205 Sum_probs=194.8
Q ss_pred ccccceEEeeeceEEEEEEEecCC--ceEEEEEecccCcccHHHHHHHHHHHhcCCC----CCcceeeeEE-ecCCcceE
Q 002278 617 NLSEKYIVGYGASSTVYKCALKNS--RPIAVKKLYNQYPHNLREFETELETIGSIRH----RNIVSLHGYA-LSPYGNLL 689 (943)
Q Consensus 617 ~~~~~~~lG~G~~g~Vy~~~~~~~--~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h----~niv~l~~~~-~~~~~~~l 689 (943)
+|.+.+.||+|+||.||.|..... ..+|+|............+..|..++..+.. +++..+++.+ ..+...++
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i 98 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI 98 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence 899999999999999999997654 4678877655433322367788888888862 6899999999 47778899
Q ss_pred EEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCC-----Cceeeccccc
Q 002278 690 FYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDEN-----FDAHLSDFGI 764 (943)
Q Consensus 690 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~-----~~~kl~DFGl 764 (943)
||+.+ |.+|.++..... ...++..++..++.|++.+|+++|+. |++||||||.|+++... ..+.+.|||+
T Consensus 99 VM~l~-G~sL~dl~~~~~-~~~fs~~T~l~ia~q~l~~l~~lH~~---G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGl 173 (322)
T KOG1164|consen 99 VMSLL-GPSLEDLRKRNP-PGRFSRKTVLRIAIQNLNALEDLHSK---GFIHRDIKPENFVVGQSSRSEVRTLYLLDFGL 173 (322)
T ss_pred EEecc-CccHHHHHHhCC-CCCcCHhHHHHHHHHHHHHHHHHHhc---CcccCCcCHHHeeecCCCCcccceEEEEecCC
Confidence 99986 899999875433 56799999999999999999999999 99999999999999754 4699999999
Q ss_pred cc--ccCCCCC------ce-eeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccc
Q 002278 765 AR--CIPTAMP------HA-STFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADD 835 (943)
Q Consensus 765 a~--~~~~~~~------~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~ 835 (943)
|+ .+..... .. .....||.+|+++....+.+.+++.|+||++.++.|+..|..||................
T Consensus 174 ar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~~~~ 253 (322)
T KOG1164|consen 174 ARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFEKDP 253 (322)
T ss_pred CccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchHHHHHHHh
Confidence 99 3321111 11 233559999999999999999999999999999999999999997544322211111110
Q ss_pred cccccccCcccccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcCCCC
Q 002278 836 NTVMEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLVSLLPAP 891 (943)
Q Consensus 836 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~~~~~~ 891 (943)
... ...+ . .. .....+.++...+-..+...+|.+..+...++......
T Consensus 254 ~~~--~~~~-~--~~---~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~~~ 301 (322)
T KOG1164|consen 254 RKL--LTDR-F--GD---LKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVFDSE 301 (322)
T ss_pred hhh--cccc-c--cC---CChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHHhc
Confidence 000 0000 0 00 11234445555555688999999999999887665544
No 421
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.90 E-value=2.8e-23 Score=243.16 Aligned_cols=265 Identities=29% Similarity=0.398 Sum_probs=174.9
Q ss_pred CCCEEEeeCCcccccCCCCccCCCCCcEEeccCCCcCCccchhccccccceEEEecCcccccCCCcccCCCCCCcEEEEe
Q 002278 63 NLQSIDFQGNKLTGQIPDEIGNCGSLVHIELSDNSLYGDIPFSISKLKQLEFLNLKNNQLTGPIPSTLTQIPNLKTLDLA 142 (943)
Q Consensus 63 ~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls 142 (943)
.-..|||+.|+|+ .+|..+. .+|+.|++++|+|+ .+|. .+++|++|+|++|+|+ .+|.. .++|+.|+|+
T Consensus 202 ~~~~LdLs~~~Lt-sLP~~l~--~~L~~L~L~~N~Lt-~LP~---lp~~Lk~LdLs~N~Lt-sLP~l---p~sL~~L~Ls 270 (788)
T PRK15387 202 GNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLT-SLPVL---PPGLLELSIF 270 (788)
T ss_pred CCcEEEcCCCCCC-cCCcchh--cCCCEEEccCCcCC-CCCC---CCCCCcEEEecCCccC-cccCc---ccccceeecc
Confidence 3456677777776 5666554 36667777777666 3443 2455666666666666 33432 2455666666
Q ss_pred ccccccccchhccccccceeccccCCccCCCCCcccccccccceeeccceecccccCCCCcCCCcccEEEeecccccCcC
Q 002278 143 RNQLTGEIPRLIYWNEVLQYLGLRGNALTGMLSPDMCQLTGLWYFDVRGNNLTGTIPDSIGNCTSFEILDISYNQITGEI 222 (943)
Q Consensus 143 ~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~l~~l~~L~~L~Ls~N~l~~~~ 222 (943)
+|.|+ .+|..+ .+|+.|+|++|+|+.+ |. .+++|+.|+|++|+|++ +
T Consensus 271 ~N~L~-~Lp~lp---~~L~~L~Ls~N~Lt~L-------------------------P~---~p~~L~~LdLS~N~L~~-L 317 (788)
T PRK15387 271 SNPLT-HLPALP---SGLCKLWIFGNQLTSL-------------------------PV---LPPGLQELSVSDNQLAS-L 317 (788)
T ss_pred CCchh-hhhhch---hhcCEEECcCCccccc-------------------------cc---cccccceeECCCCcccc-C
Confidence 66655 233211 2344444444444433 22 12456666666666653 2
Q ss_pred CCCCCcceEeEEEecCccccccCCccccccCCCcEEecCCCCCCCCCCcccCCCCCcceEEecCCCCCCCCCCCcCCCCc
Q 002278 223 PYNIGFLQVATLSLQGNKLTGKIPEVIGLMQALAVLDLSENELVGPIPPILGNLSYTGKLYLHGNKLTGPIPPELGNMSK 302 (943)
Q Consensus 223 ~~~~~~~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~ 302 (943)
|.. ..+|+.|++++|++++ +|.. ..+|+.|+|++|+|++ +|.. ..+|+.|++++|+|+. +|.. ..+
T Consensus 318 p~l--p~~L~~L~Ls~N~L~~-LP~l---p~~Lq~LdLS~N~Ls~-LP~l---p~~L~~L~Ls~N~L~~-LP~l---~~~ 383 (788)
T PRK15387 318 PAL--PSELCKLWAYNNQLTS-LPTL---PSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLTS-LPAL---PSG 383 (788)
T ss_pred CCC--cccccccccccCcccc-cccc---ccccceEecCCCccCC-CCCC---Ccccceehhhcccccc-Cccc---ccc
Confidence 321 1245566666666664 3431 2579999999999995 5543 3568889999999995 5543 367
Q ss_pred CcEEEcccCccccccccccCCcccceEEEccccccCCcCcccccCCCcCcEEEeeCCcccCcccccccccCccceeeccC
Q 002278 303 LSYLQLQNNQLVGTIPAELGKLEQLFELNLADNNLEGPIPHNISSCTALNQFNVHGNRLSGAIPSSFRNLGSLTYLNLSR 382 (943)
Q Consensus 303 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 382 (943)
|+.|++++|+|++ +|.. .++|+.|++++|+|++ +|.. ..+|+.|++++|+|+ .+|..|..+++|+.|+|++
T Consensus 384 L~~LdLs~N~Lt~-LP~l---~s~L~~LdLS~N~Lss-IP~l---~~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~ 454 (788)
T PRK15387 384 LKELIVSGNRLTS-LPVL---PSELKELMVSGNRLTS-LPML---PSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEG 454 (788)
T ss_pred cceEEecCCcccC-CCCc---ccCCCEEEccCCcCCC-CCcc---hhhhhhhhhccCccc-ccChHHhhccCCCeEECCC
Confidence 9999999999994 5543 3579999999999985 5553 356889999999998 6788999999999999999
Q ss_pred CcCCCCCCCCCC
Q 002278 383 NNFKGKVPTELG 394 (943)
Q Consensus 383 N~l~~~~~~~~~ 394 (943)
|+|++..+..+.
T Consensus 455 N~Ls~~~~~~L~ 466 (788)
T PRK15387 455 NPLSERTLQALR 466 (788)
T ss_pred CCCCchHHHHHH
Confidence 999987666553
No 422
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.89 E-value=7.7e-24 Score=206.36 Aligned_cols=249 Identities=23% Similarity=0.370 Sum_probs=193.7
Q ss_pred cccceEEeeeceEEEEEEEecCCceEEEEEeccc--CcccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEEcc
Q 002278 618 LSEKYIVGYGASSTVYKCALKNSRPIAVKKLYNQ--YPHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMV 695 (943)
Q Consensus 618 ~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 695 (943)
+....+|.+...|..|+|+++ |..+++|++... .....++|..|.-.++.+.||||.+++|.|..+....++..||+
T Consensus 192 lnl~tkl~e~hsgelwrgrwq-gndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp 270 (448)
T KOG0195|consen 192 LNLITKLAESHSGELWRGRWQ-GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMP 270 (448)
T ss_pred hhhhhhhccCCCccccccccc-CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeecc
Confidence 344456888999999999998 445666766432 23445689999999999999999999999999999999999999
Q ss_pred CCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeec--ccccccccCCCCC
Q 002278 696 NGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLS--DFGIARCIPTAMP 773 (943)
Q Consensus 696 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~--DFGla~~~~~~~~ 773 (943)
.|+|+..+++.. .-..+..++.+++.++|+|++|||+. .|-|.---+.+..|++|++.+++|+ |--++. ....
T Consensus 271 ~gslynvlhe~t-~vvvd~sqav~faldiargmaflhsl-ep~ipr~~lns~hvmidedltarismad~kfsf---qe~g 345 (448)
T KOG0195|consen 271 FGSLYNVLHEQT-SVVVDHSQAVRFALDIARGMAFLHSL-EPMIPRFYLNSKHVMIDEDLTARISMADTKFSF---QEVG 345 (448)
T ss_pred chHHHHHHhcCc-cEEEecchHHHHHHHHHhhHHHHhhc-chhhhhhhcccceEEecchhhhheecccceeee---eccc
Confidence 999999998653 34577889999999999999999996 4445556789999999999887764 322221 1111
Q ss_pred ceeeeEecccceeCccccccCCCC---CcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccccCc
Q 002278 774 HASTFVLGTIGYIDPEYAHTSRLN---EKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTC 850 (943)
Q Consensus 774 ~~~~~~~gt~~y~aPE~~~~~~~~---~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 850 (943)
..=.|.||+||.++.++-+ .++|+|||++++||+.|...||.+..+++.-+.+..+. ....++|.+.
T Consensus 346 -----r~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkialeg--lrv~ippgis--- 415 (448)
T KOG0195|consen 346 -----RAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIALEG--LRVHIPPGIS--- 415 (448)
T ss_pred -----cccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhhhcc--ccccCCCCcc---
Confidence 1236889999999876644 58999999999999999999999888877655543322 2223334443
Q ss_pred cCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcC
Q 002278 851 VDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLVSLL 888 (943)
Q Consensus 851 ~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~~~ 888 (943)
..+.+++.-|+..||.+||.++.++-.|+++.
T Consensus 416 ------~hm~klm~icmnedpgkrpkfdmivpilekm~ 447 (448)
T KOG0195|consen 416 ------RHMNKLMNICMNEDPGKRPKFDMIVPILEKMI 447 (448)
T ss_pred ------HHHHHHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence 56788999999999999999999999888653
No 423
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.89 E-value=5.2e-23 Score=223.68 Aligned_cols=176 Identities=16% Similarity=0.119 Sum_probs=134.2
Q ss_pred HHHhhccccceEEeeeceEEEEEEEec--CCceEEEEEecccC-----cccHHHHHHHHHHHhcCCCCCcceeeeEEecC
Q 002278 612 MRSTENLSEKYIVGYGASSTVYKCALK--NSRPIAVKKLYNQY-----PHNLREFETELETIGSIRHRNIVSLHGYALSP 684 (943)
Q Consensus 612 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~--~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 684 (943)
....++|...+.||+|+||+||+|.++ +++.||||++.... ....+.+.+|++++++++|+|+++.+.. .
T Consensus 14 ~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~---~ 90 (365)
T PRK09188 14 PALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLA---T 90 (365)
T ss_pred ccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEE---c
Confidence 345678999999999999999999875 46778999875331 2234568999999999999999853322 2
Q ss_pred CcceEEEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCC-CCccEEECCCCceeecccc
Q 002278 685 YGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDV-KSSNILIDENFDAHLSDFG 763 (943)
Q Consensus 685 ~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dl-kp~Nill~~~~~~kl~DFG 763 (943)
+..++||||++|++|... . ... ...++.++++||+|||+. ||+|||| ||+||+++.++.+||+|||
T Consensus 91 ~~~~LVmE~~~G~~L~~~-~---~~~------~~~~~~~i~~aL~~lH~~---gIiHrDL~KP~NILv~~~~~ikLiDFG 157 (365)
T PRK09188 91 GKDGLVRGWTEGVPLHLA-R---PHG------DPAWFRSAHRALRDLHRA---GITHNDLAKPQNWLMGPDGEAAVIDFQ 157 (365)
T ss_pred CCcEEEEEccCCCCHHHh-C---ccc------hHHHHHHHHHHHHHHHHC---CCeeCCCCCcceEEEcCCCCEEEEECc
Confidence 467999999999999632 1 111 146788999999999999 9999999 9999999999999999999
Q ss_pred cccccCCCCCcee-------eeEecccceeCccccccCC------CCCcchhh
Q 002278 764 IARCIPTAMPHAS-------TFVLGTIGYIDPEYAHTSR------LNEKSDVY 803 (943)
Q Consensus 764 la~~~~~~~~~~~-------~~~~gt~~y~aPE~~~~~~------~~~~~Dvw 803 (943)
+|+.+........ +...+++.|+|||++...+ .+..+|-|
T Consensus 158 lA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~~dgW 210 (365)
T PRK09188 158 LASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPRERKILARKSLPSRIW 210 (365)
T ss_pred cceecccCcchhhhhhhhhhhhhhccCccCCcccCChhhhccccccccccCcE
Confidence 9997644321111 2455788899999886533 33456766
No 424
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.89 E-value=1.6e-23 Score=201.20 Aligned_cols=259 Identities=18% Similarity=0.187 Sum_probs=197.8
Q ss_pred hhccccceEEeeeceEEEEEEE-ecCCceEEEEEecccCcccHHHHHHHHHHHhcCCC-CCcceeeeEEecCCcceEEEE
Q 002278 615 TENLSEKYIVGYGASSTVYKCA-LKNSRPIAVKKLYNQYPHNLREFETELETIGSIRH-RNIVSLHGYALSPYGNLLFYD 692 (943)
Q Consensus 615 ~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~l~~~~~~~~~~~lv~e 692 (943)
...|..++.||.|+||.+|.|. ..+|..||+|.-..... ...+.-|..+++.+++ ..|..+..++.+.....+||+
T Consensus 14 ~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~--hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMd 91 (341)
T KOG1163|consen 14 GGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAK--HPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMD 91 (341)
T ss_pred ccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCC--CcchhHHHHHHHHhccCCCCchhhhhccccccceeeee
Confidence 4678999999999999999998 46799999998654332 2467778999999975 788888889999999999999
Q ss_pred EccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECC---CCceeecccccccccC
Q 002278 693 YMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDE---NFDAHLSDFGIARCIP 769 (943)
Q Consensus 693 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~---~~~~kl~DFGla~~~~ 769 (943)
.+ |.+|.++.... ...++..+++-.|-|++.-++|+|.+ +++||||||+|+|+.- ...+.++|||+|+.+.
T Consensus 92 LL-GPsLEdLfnfC--~R~ftmkTvLMLaDQml~RiEyvH~r---~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~ 165 (341)
T KOG1163|consen 92 LL-GPSLEDLFNFC--SRRFTMKTVLMLADQMLSRIEYVHLR---NFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYR 165 (341)
T ss_pred cc-CccHHHHHHHH--hhhhhHHhHHHHHHHHHHHHHHHHhh---ccccccCCccceeeccccccceEEEEeccchhhhc
Confidence 87 89999988643 23588999999999999999999999 9999999999999963 3459999999999875
Q ss_pred CCCCc------eeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHH---HHHHHhccc-cccc
Q 002278 770 TAMPH------ASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLH---QLIMSKADD-NTVM 839 (943)
Q Consensus 770 ~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~---~~~~~~~~~-~~~~ 839 (943)
+.... ......||.+|.+--...+.+.+.+.|+-|+|.++.++--|..||++-.... ....+.... ....
T Consensus 166 d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyEkI~EkK~s~~i 245 (341)
T KOG1163|consen 166 DIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYEKISEKKMSTPI 245 (341)
T ss_pred cccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHHHHHHhhcCCCH
Confidence 43221 2234569999999999999999999999999999999999999998653321 111111111 1122
Q ss_pred cccCcccccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcCCC
Q 002278 840 EAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLVSLLPA 890 (943)
Q Consensus 840 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~~~~~ 890 (943)
+.+-..+ +.++.-.+.-|-..--++-|...-+.+.+..+...
T Consensus 246 e~LC~G~---------P~EF~myl~Y~R~L~F~E~Pdy~ylrqlFriLfr~ 287 (341)
T KOG1163|consen 246 EVLCKGF---------PAEFAMYLNYCRGLGFEEKPDYMYLRQLFRILFRT 287 (341)
T ss_pred HHHhCCC---------cHHHHHHHHHHhhcCCCCCCcHHHHHHHHHHHHhh
Confidence 2222222 24556677777777788888887776666554443
No 425
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.87 E-value=9.6e-22 Score=197.65 Aligned_cols=254 Identities=18% Similarity=0.201 Sum_probs=193.1
Q ss_pred ccccceEEeeeceEEEEEEEe-cCCceEEEEEecccCcccHHHHHHHHHHHhcCC-CCCcceeeeEEecCCcceEEEEEc
Q 002278 617 NLSEKYIVGYGASSTVYKCAL-KNSRPIAVKKLYNQYPHNLREFETELETIGSIR-HRNIVSLHGYALSPYGNLLFYDYM 694 (943)
Q Consensus 617 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~ 694 (943)
.|.+.++||+|+||.++.|+. -++++||||.-... ....++..|.+.++.+. .++|..+|-+..++....+|+|.+
T Consensus 29 hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrk--S~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidLL 106 (449)
T KOG1165|consen 29 HYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRK--SEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDLL 106 (449)
T ss_pred cceeccccccCcceeeecccccccCceEEEEecccc--CCcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhhh
Confidence 688999999999999999984 46899999975443 33467888999999885 699999998888888999999987
Q ss_pred cCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCC-----CceeecccccccccC
Q 002278 695 VNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDEN-----FDAHLSDFGIARCIP 769 (943)
Q Consensus 695 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~-----~~~kl~DFGla~~~~ 769 (943)
|.+|.|+.... ..+++..+++.+|.|++.-++|+|++ .+|.|||||+|+|+... ..+.++|||+|+.+.
T Consensus 107 -GPSLEDLFD~C--gR~FSvKTV~miA~Qmi~rie~vH~k---~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~Yr 180 (449)
T KOG1165|consen 107 -GPSLEDLFDLC--GRRFSVKTVAMIAKQMITRIEYVHEK---DLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYR 180 (449)
T ss_pred -CcCHHHHHHHh--cCcccHHhHHHHHHHHHHHHHHHHhc---ceeecccCccceeecCCCCCCCceEEEEeccchhhhc
Confidence 88999987643 34699999999999999999999999 99999999999999643 348999999999886
Q ss_pred CCCCce------eeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCC---ccHHHHHHHhcccc-ccc
Q 002278 770 TAMPHA------STFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNE---SNLHQLIMSKADDN-TVM 839 (943)
Q Consensus 770 ~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~---~~~~~~~~~~~~~~-~~~ 839 (943)
+..... .....||.+||+-....+.+.+.+.|+-|+|=++++++-|..||.+- ...+.+..+..... ...
T Consensus 181 Dp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYeKIGe~Kr~T~i 260 (449)
T KOG1165|consen 181 DPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKYEKIGETKRSTPI 260 (449)
T ss_pred CccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcchHHHHHHhccccccCCH
Confidence 554322 23356999999999999999999999999999999999999999853 22222222222111 111
Q ss_pred cccCcccccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhc
Q 002278 840 EAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLVSL 887 (943)
Q Consensus 840 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~~ 887 (943)
+.+.. ..+.++...++-.=..+-.+-|.++-+...+..+
T Consensus 261 ~~Lc~---------g~P~efa~Yl~yvR~L~F~E~PDYdylr~Lf~dv 299 (449)
T KOG1165|consen 261 EVLCE---------GFPEEFATYLRYVRRLDFFETPDYDYLRKLFDDV 299 (449)
T ss_pred HHHHh---------cCHHHHHHHHHHHHhcCcccCCCHHHHHHHHHHH
Confidence 11111 1223444444444456677888876665554433
No 426
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.85 E-value=3.4e-20 Score=205.95 Aligned_cols=256 Identities=27% Similarity=0.367 Sum_probs=199.0
Q ss_pred cccceEEeeeceEEEEEEEecCCceEEEEEecccCcc---cHHHHHHHHHHHhcCCCC-CcceeeeEEecCCcceEEEEE
Q 002278 618 LSEKYIVGYGASSTVYKCALKNSRPIAVKKLYNQYPH---NLREFETELETIGSIRHR-NIVSLHGYALSPYGNLLFYDY 693 (943)
Q Consensus 618 ~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~-niv~l~~~~~~~~~~~lv~e~ 693 (943)
|.....||.|+||.||++... ..+|+|.+...... ....+.+|+..++.+.|+ +++++++++......++++++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 79 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEY 79 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEec
Confidence 567788999999999999987 77899988655433 367889999999999988 799999999777778999999
Q ss_pred ccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCC-ceeecccccccccCCCC
Q 002278 694 MVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENF-DAHLSDFGIARCIPTAM 772 (943)
Q Consensus 694 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~-~~kl~DFGla~~~~~~~ 772 (943)
+.++++.+++........+.......++.|++.+++|+|+. +++|||+||+||+++..+ .++++|||.++......
T Consensus 80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~---~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~ 156 (384)
T COG0515 80 VDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSK---GIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPG 156 (384)
T ss_pred CCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeecCCCCeEEEeccCcceecCCCC
Confidence 99999997775321113688999999999999999999999 999999999999999888 79999999998654433
Q ss_pred Cc-----eeeeEecccceeCcccccc---CCCCCcchhhhHHHHHHHHHhCCCCCCCCcc---HHHHHHHhcccc-c-cc
Q 002278 773 PH-----ASTFVLGTIGYIDPEYAHT---SRLNEKSDVYSFGIVLLEILTGKKAVDNESN---LHQLIMSKADDN-T-VM 839 (943)
Q Consensus 773 ~~-----~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwSlGvil~elltG~~p~~~~~~---~~~~~~~~~~~~-~-~~ 839 (943)
.. ......|+..|+|||...+ ..+....|+||+|++++++++|..||..... ............ . ..
T Consensus 157 ~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (384)
T COG0515 157 STSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLA 236 (384)
T ss_pred ccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCcccc
Confidence 22 2345679999999999988 5788999999999999999999999876653 222222222111 1 11
Q ss_pred cccCcccccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002278 840 EAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARV 883 (943)
Q Consensus 840 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~ 883 (943)
....+... ......+.+++..|+..+|..|.+..+....
T Consensus 237 ~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 237 SPLSPSNP-----ELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred cccCcccc-----chhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 11111110 1122456788999999999999999887765
No 427
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.85 E-value=1.6e-21 Score=230.33 Aligned_cols=222 Identities=28% Similarity=0.422 Sum_probs=96.4
Q ss_pred CcEEeccCCCcCCccchhccccccceEEEecCcccccCCCcccCCCCCCcEEEEeccccccccchhccccccceeccccC
Q 002278 88 LVHIELSDNSLYGDIPFSISKLKQLEFLNLKNNQLTGPIPSTLTQIPNLKTLDLARNQLTGEIPRLIYWNEVLQYLGLRG 167 (943)
Q Consensus 88 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~ 167 (943)
...|+|+++.++ .+|..+. ++|+.|+|++|+|+ .+|..+. ++|++|+|++|+|+ .+|..+. .+|+.|+|++
T Consensus 180 ~~~L~L~~~~Lt-sLP~~Ip--~~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~Ls~ 250 (754)
T PRK15370 180 KTELRLKILGLT-TIPACIP--EQITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLT-SIPATLP--DTIQEMELSI 250 (754)
T ss_pred ceEEEeCCCCcC-cCCcccc--cCCcEEEecCCCCC-cCChhhc--cCCCEEECCCCccc-cCChhhh--ccccEEECcC
Confidence 344444444444 3343332 24444455554444 2333322 24555555555544 2333221 2455555555
Q ss_pred CccCCCCCcccccccccceeeccceecccccCCCCcCCCcccEEEeecccccCcCCCCCCcceEeEEEecCccccccCCc
Q 002278 168 NALTGMLSPDMCQLTGLWYFDVRGNNLTGTIPDSIGNCTSFEILDISYNQITGEIPYNIGFLQVATLSLQGNKLTGKIPE 247 (943)
Q Consensus 168 n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~L~~L~L~~n~l~~~~~~ 247 (943)
|.+..++. .+. .+|+.|++++|+|+ .+|..+. .+|+.|++++|++++ +|..+. .+|+.|++++|.++. +|.
T Consensus 251 N~L~~LP~-~l~--s~L~~L~Ls~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt~-LP~~lp-~sL~~L~Ls~N~Lt~-LP~ 321 (754)
T PRK15370 251 NRITELPE-RLP--SALQSLDLFHNKIS-CLPENLP--EELRYLSVYDNSIRT-LPAHLP-SGITHLNVQSNSLTA-LPE 321 (754)
T ss_pred CccCcCCh-hHh--CCCCEEECcCCccC-ccccccC--CCCcEEECCCCcccc-Ccccch-hhHHHHHhcCCcccc-CCc
Confidence 55554322 221 34566666666665 3444332 356666666666652 232211 133444444444442 222
Q ss_pred cccccCCCcEEecCCCCCCCCCCcccCCCCCcceEEecCCCCCCCCCCCcCCCCcCcEEEcccCccccccccccCCcccc
Q 002278 248 VIGLMQALAVLDLSENELVGPIPPILGNLSYTGKLYLHGNKLTGPIPPELGNMSKLSYLQLQNNQLVGTIPAELGKLEQL 327 (943)
Q Consensus 248 ~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 327 (943)
.+ .++|+.|++++|.++. +|..+. ++|+.|+|++|+|+ .+|..+. ++|+.|+|++|+++ .+|..+. ..|
T Consensus 322 ~l--~~sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~L~-~LP~~lp--~~L~~LdLs~N~Lt-~LP~~l~--~sL 390 (754)
T PRK15370 322 TL--PPGLKTLEAGENALTS-LPASLP--PELQVLDVSKNQIT-VLPETLP--PTITTLDVSRNALT-NLPENLP--AAL 390 (754)
T ss_pred cc--cccceeccccCCcccc-CChhhc--CcccEEECCCCCCC-cCChhhc--CCcCEEECCCCcCC-CCCHhHH--HHH
Confidence 21 1345555555555543 333221 34445555555444 2333221 34555555555554 2232221 134
Q ss_pred eEEEccccccC
Q 002278 328 FELNLADNNLE 338 (943)
Q Consensus 328 ~~L~L~~N~l~ 338 (943)
+.|++++|+|.
T Consensus 391 ~~LdLs~N~L~ 401 (754)
T PRK15370 391 QIMQASRNNLV 401 (754)
T ss_pred HHHhhccCCcc
Confidence 44444444444
No 428
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.85 E-value=3.1e-21 Score=227.94 Aligned_cols=183 Identities=28% Similarity=0.457 Sum_probs=81.2
Q ss_pred CCcEEecCCCCCCCCCCcccCCCCCcceEEecCCCCCCCCCCCcCCCCcCcEEEcccCccccccccccCCcccceEEEcc
Q 002278 254 ALAVLDLSENELVGPIPPILGNLSYTGKLYLHGNKLTGPIPPELGNMSKLSYLQLQNNQLVGTIPAELGKLEQLFELNLA 333 (943)
Q Consensus 254 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 333 (943)
+|+.|+|++|.+. .+|..+. ++|+.|+|++|+++ .+|..+. ++|+.|++++|+++. +|..+. ++|+.|+++
T Consensus 242 ~L~~L~Ls~N~L~-~LP~~l~--s~L~~L~Ls~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt~-LP~~lp--~sL~~L~Ls 312 (754)
T PRK15370 242 TIQEMELSINRIT-ELPERLP--SALQSLDLFHNKIS-CLPENLP--EELRYLSVYDNSIRT-LPAHLP--SGITHLNVQ 312 (754)
T ss_pred cccEEECcCCccC-cCChhHh--CCCCEEECcCCccC-ccccccC--CCCcEEECCCCcccc-Ccccch--hhHHHHHhc
Confidence 4555555555555 2333322 24555555555555 2333332 345555555555552 232221 234445555
Q ss_pred ccccCCcCcccccCCCcCcEEEeeCCcccCcccccccccCccceeeccCCcCCCCCCCCCCCCCCccEEecCCCcCCCcc
Q 002278 334 DNNLEGPIPHNISSCTALNQFNVHGNRLSGAIPSSFRNLGSLTYLNLSRNNFKGKVPTELGRIINLDTLDLSVNNFSGSV 413 (943)
Q Consensus 334 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 413 (943)
+|+++. +|..+ .+ +|+.|++++|.+++ +|..+. ++|+.|++++|+|+ .+
T Consensus 313 ~N~Lt~-LP~~l--~~------------------------sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~L~-~L 361 (754)
T PRK15370 313 SNSLTA-LPETL--PP------------------------GLKTLEAGENALTS-LPASLP--PELQVLDVSKNQIT-VL 361 (754)
T ss_pred CCcccc-CCccc--cc------------------------cceeccccCCcccc-CChhhc--CcccEEECCCCCCC-cC
Confidence 555442 22211 13 34444444444442 333222 34555555555554 23
Q ss_pred CCCcccccccceeecccccccccCCccccCCCccceecccCccccccCChhhh----cccccceecccCcccC
Q 002278 414 PASIGDLEHLLTLNLSRNHLNGLLPAEFGNLRSIQTIDMSFNQLSGSIPAELG----QLQNIISLILNNNNLQ 482 (943)
Q Consensus 414 ~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~----~l~~L~~L~L~~N~l~ 482 (943)
|..+. +.|+.|+|++|+|+. +|..+. .+|+.|++++|+|+ .+|..+. .++++..|+|.+|+++
T Consensus 362 P~~lp--~~L~~LdLs~N~Lt~-LP~~l~--~sL~~LdLs~N~L~-~LP~sl~~~~~~~~~l~~L~L~~Npls 428 (754)
T PRK15370 362 PETLP--PTITTLDVSRNALTN-LPENLP--AALQIMQASRNNLV-RLPESLPHFRGEGPQPTRIIVEYNPFS 428 (754)
T ss_pred Chhhc--CCcCEEECCCCcCCC-CCHhHH--HHHHHHhhccCCcc-cCchhHHHHhhcCCCccEEEeeCCCcc
Confidence 33331 345555555555552 333332 24555555555555 3343322 2345555666666554
No 429
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.84 E-value=8.7e-22 Score=228.54 Aligned_cols=255 Identities=20% Similarity=0.227 Sum_probs=185.2
Q ss_pred cceEEeeeceEEEEEEEecC-CceEEEEEeccc--CcccHH----HHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEE
Q 002278 620 EKYIVGYGASSTVYKCALKN-SRPIAVKKLYNQ--YPHNLR----EFETELETIGSIRHRNIVSLHGYALSPYGNLLFYD 692 (943)
Q Consensus 620 ~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~--~~~~~~----~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 692 (943)
..+++|.|++|.|+.+.... ....+.|..... ...... .+..|+-+-..+.|||++..+..+.+.....-.||
T Consensus 322 ~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~mE 401 (601)
T KOG0590|consen 322 PGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSME 401 (601)
T ss_pred ccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhhh
Confidence 45679999999888776542 333444433210 111111 25567777778899999988888877777777799
Q ss_pred EccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCC
Q 002278 693 YMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAM 772 (943)
Q Consensus 693 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~ 772 (943)
||++ +|..++.. ...+...++-.++.|+..|++|+|+. ||.|||+|++|++++.+|.+||+|||.+.......
T Consensus 402 ~~~~-Dlf~~~~~---~~~~~~~e~~c~fKqL~~Gv~y~h~~---GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~ 474 (601)
T KOG0590|consen 402 YCPY-DLFSLVMS---NGKLTPLEADCFFKQLLRGVKYLHSM---GLAHRDLKLENLLVTENGILKIIDFGAASVFRYPW 474 (601)
T ss_pred cccH-HHHHHHhc---ccccchhhhhHHHHHHHHHHHHHHhc---CceeccCccccEEEecCCceEEeecCcceeeccCc
Confidence 9999 99999863 34688888999999999999999999 99999999999999999999999999998764432
Q ss_pred C---ceeeeEecccceeCccccccCCCCC-cchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCccccc
Q 002278 773 P---HASTFVLGTIGYIDPEYAHTSRLNE-KSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSV 848 (943)
Q Consensus 773 ~---~~~~~~~gt~~y~aPE~~~~~~~~~-~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 848 (943)
. ......+|+..|+|||+..+.+|++ ..||||.|+++..|.+|+.||........................+
T Consensus 475 e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~~~~~~---- 550 (601)
T KOG0590|consen 475 EKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNYSDQRNIFEGP---- 550 (601)
T ss_pred chhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhccccccccccCh----
Confidence 2 3455677999999999999999886 6899999999999999999996332211110000000000000000
Q ss_pred CccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 002278 849 TCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLV 885 (943)
Q Consensus 849 ~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~ 885 (943)
.......+.+...++.+++++||.+|.|++++++.=|
T Consensus 551 ~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d~W 587 (601)
T KOG0590|consen 551 NRLLSLLPRETRIIIYRMLQLDPTKRITIEQILNDEW 587 (601)
T ss_pred HHHHHhchhhHHHHHHHHccCChhheecHHHHhhChH
Confidence 0011123356667999999999999999999988644
No 430
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.83 E-value=9e-21 Score=191.08 Aligned_cols=171 Identities=14% Similarity=0.197 Sum_probs=134.5
Q ss_pred HhhccccceEEeeeceEEEEEEEecCCceEEEEEecccCcccHHH---------HHHHHHHHhcCCCCCcceeeeEEecC
Q 002278 614 STENLSEKYIVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLRE---------FETELETIGSIRHRNIVSLHGYALSP 684 (943)
Q Consensus 614 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~---------~~~E~~~l~~l~h~niv~l~~~~~~~ 684 (943)
-.++|...+++|.|+||.||.+.. +++.+|+|.+.......... +++|++.++++.||+|..+.+++...
T Consensus 29 l~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~ 107 (232)
T PRK10359 29 LSYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLA 107 (232)
T ss_pred hhCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeec
Confidence 467899999999999999999766 57789999997554333322 67899999999999999999886643
Q ss_pred --------CcceEEEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCc
Q 002278 685 --------YGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFD 756 (943)
Q Consensus 685 --------~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~ 756 (943)
...+++|||++|.+|.++.. ++. ....+++.+++.+|+. |++|||+||+||+++.+|
T Consensus 108 ~~~~~~~~~~~~lvmEyi~G~tL~~~~~-------~~~----~~~~~i~~~l~~lH~~---gi~H~Dikp~Nili~~~g- 172 (232)
T PRK10359 108 ERKTLRYAHTYIMLIEYIEGVELNDMPE-------ISE----DVKAKIKASIESLHQH---GMVSGDPHKGNFIVSKNG- 172 (232)
T ss_pred ccccccccCCeEEEEEEECCccHHHhhh-------ccH----HHHHHHHHHHHHHHHc---CCccCCCChHHEEEeCCC-
Confidence 35789999999999988642 222 2456899999999999 999999999999999988
Q ss_pred eeecccccccccCCCCCceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHH
Q 002278 757 AHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEIL 813 (943)
Q Consensus 757 ~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ell 813 (943)
++++|||..+........ ..+.....++.++|+||||+++..+.
T Consensus 173 i~liDfg~~~~~~e~~a~-------------d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 173 LRIIDLSGKRCTAQRKAK-------------DRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred EEEEECCCcccccchhhH-------------HHHHHHhHhcccccccceeEeehHHH
Confidence 999999988755322111 11334445668999999999987664
No 431
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.82 E-value=3.7e-20 Score=185.44 Aligned_cols=139 Identities=15% Similarity=0.135 Sum_probs=108.9
Q ss_pred eEEeeeceEEEEEEEecCCceEEEEEecccCcc--c-------H-----------------HHHHHHHHHHhcCCCCCcc
Q 002278 622 YIVGYGASSTVYKCALKNSRPIAVKKLYNQYPH--N-------L-----------------REFETELETIGSIRHRNIV 675 (943)
Q Consensus 622 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~-------~-----------------~~~~~E~~~l~~l~h~niv 675 (943)
..||+|+||.||+|...+|+.||||++...... . . .....|++.++++.++++.
T Consensus 3 ~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v~ 82 (190)
T cd05147 3 GCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGIP 82 (190)
T ss_pred CccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCCC
Confidence 569999999999999888999999998654211 1 0 1223599999999888775
Q ss_pred eeeeEEecCCcceEEEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHh-hhCCCCCeEecCCCCccEEECCC
Q 002278 676 SLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYL-HHDCNPRIIHRDVKSSNILIDEN 754 (943)
Q Consensus 676 ~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~L-H~~~~~~ivH~Dlkp~Nill~~~ 754 (943)
....+.. ...++||||++++++..... ....++..++..++.|++.+|+|+ |+. +|+||||||+||+++ +
T Consensus 83 ~p~~~~~--~~~~iVmE~i~g~~l~~~~~---~~~~~~~~~~~~i~~qi~~~L~~l~H~~---giiHrDlkP~NIli~-~ 153 (190)
T cd05147 83 CPEPILL--KSHVLVMEFIGDDGWAAPRL---KDAPLSESKARELYLQVIQIMRILYQDC---RLVHADLSEYNLLYH-D 153 (190)
T ss_pred CCcEEEe--cCCEEEEEEeCCCCCcchhh---hcCCCCHHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEE-C
Confidence 4433322 23489999999887755432 234688999999999999999999 687 999999999999998 4
Q ss_pred CceeecccccccccC
Q 002278 755 FDAHLSDFGIARCIP 769 (943)
Q Consensus 755 ~~~kl~DFGla~~~~ 769 (943)
+.++++|||+|....
T Consensus 154 ~~v~LiDFG~a~~~~ 168 (190)
T cd05147 154 GKLYIIDVSQSVEHD 168 (190)
T ss_pred CcEEEEEccccccCC
Confidence 789999999997543
No 432
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.81 E-value=7.4e-22 Score=179.96 Aligned_cols=165 Identities=32% Similarity=0.553 Sum_probs=151.7
Q ss_pred CCcCCCCCCCEEEeeCCcccccCCCCccCCCCCcEEeccCCCcCCccchhccccccceEEEecCcccccCCCcccCCCCC
Q 002278 56 PSIGDLRNLQSIDFQGNKLTGQIPDEIGNCGSLVHIELSDNSLYGDIPFSISKLKQLEFLNLKNNQLTGPIPSTLTQIPN 135 (943)
Q Consensus 56 ~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~ 135 (943)
+.+-++.+++.|-||+|+++ .+|..|..+.+|+.|++++|+|+ ++|.+++.+++|+.|+++-|++. +.|..|+.+|.
T Consensus 27 ~gLf~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~ 103 (264)
T KOG0617|consen 27 PGLFNMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPA 103 (264)
T ss_pred ccccchhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCch
Confidence 35667888999999999999 78889999999999999999999 89999999999999999999998 89999999999
Q ss_pred CcEEEEeccccc-cccchhccccccceeccccCCccCCCCCcccccccccceeeccceecccccCCCCcCCCcccEEEee
Q 002278 136 LKTLDLARNQLT-GEIPRLIYWNEVLQYLGLRGNALTGMLSPDMCQLTGLWYFDVRGNNLTGTIPDSIGNCTSFEILDIS 214 (943)
Q Consensus 136 L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~l~~l~~L~~L~Ls 214 (943)
|+.|||+.|++. ..+|..|+.+..|+.|+|++|.+. +.|++++.+++|+.|.++.|.+- .+|..++.++.|++|++.
T Consensus 104 levldltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelhiq 181 (264)
T KOG0617|consen 104 LEVLDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHIQ 181 (264)
T ss_pred hhhhhccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHhcc
Confidence 999999999997 468999999999999999999998 56789999999999999999998 789999999999999999
Q ss_pred cccccCcCCCCC
Q 002278 215 YNQITGEIPYNI 226 (943)
Q Consensus 215 ~N~l~~~~~~~~ 226 (943)
+|+++ .+|..+
T Consensus 182 gnrl~-vlppel 192 (264)
T KOG0617|consen 182 GNRLT-VLPPEL 192 (264)
T ss_pred cceee-ecChhh
Confidence 99998 444443
No 433
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.80 E-value=1.2e-21 Score=178.66 Aligned_cols=155 Identities=30% Similarity=0.537 Sum_probs=88.3
Q ss_pred CcccceEEEccccccCCcCcccccCCCcCcEEEeeCCcccCcccccccccCccceeeccCCcCCCCCCCCCCCCCCccEE
Q 002278 323 KLEQLFELNLADNNLEGPIPHNISSCTALNQFNVHGNRLSGAIPSSFRNLGSLTYLNLSRNNFKGKVPTELGRIINLDTL 402 (943)
Q Consensus 323 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 402 (943)
++..++.|.|++|+++ .+|..++.+.+|+.|++++|+|. .+|..+..+++|+.|+++-|++. ..|..|+.++.|+.|
T Consensus 31 ~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~levl 107 (264)
T KOG0617|consen 31 NMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEVL 107 (264)
T ss_pred chhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhhhh
Confidence 3455556666666665 44555666666666666666665 45555666666666666666655 555666666666666
Q ss_pred ecCCCcCCC-ccCCCcccccccceeecccccccccCCccccCCCccceecccCccccccCChhhhcccccceecccCccc
Q 002278 403 DLSVNNFSG-SVPASIGDLEHLLTLNLSRNHLNGLLPAEFGNLRSIQTIDMSFNQLSGSIPAELGQLQNIISLILNNNNL 481 (943)
Q Consensus 403 ~Ls~N~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l 481 (943)
||++|++.. .+|..|-.++.|+.|+|+.|.+. .+|..+++|++|+.|.+..|.+- .+|.+++.|..|++|.+++|++
T Consensus 108 dltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelhiqgnrl 185 (264)
T KOG0617|consen 108 DLTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHIQGNRL 185 (264)
T ss_pred hccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHhccccee
Confidence 666655542 34555555555555555555554 45555555555555555555554 4555555555555555555555
Q ss_pred C
Q 002278 482 Q 482 (943)
Q Consensus 482 ~ 482 (943)
+
T Consensus 186 ~ 186 (264)
T KOG0617|consen 186 T 186 (264)
T ss_pred e
Confidence 4
No 434
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.80 E-value=5.9e-21 Score=209.51 Aligned_cols=223 Identities=22% Similarity=0.225 Sum_probs=174.8
Q ss_pred EeeeceEEEEEEEe----cCCceEEEEEecccCccc--HHHHHHHHHHHhcCC-CCCcceeeeEEecCCcceEEEEEccC
Q 002278 624 VGYGASSTVYKCAL----KNSRPIAVKKLYNQYPHN--LREFETELETIGSIR-HRNIVSLHGYALSPYGNLLFYDYMVN 696 (943)
Q Consensus 624 lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~~ 696 (943)
+|+|+||.|+.++- ..+.-+|+|..++..... ......|..++...+ ||.+|+++-.++.+...+++++|..+
T Consensus 2 lg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~rg 81 (612)
T KOG0603|consen 2 LGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLRG 81 (612)
T ss_pred CCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhccc
Confidence 69999999998753 236778888876554221 124556888888887 99999999999999999999999999
Q ss_pred CChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCCcee
Q 002278 697 GSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHAS 776 (943)
Q Consensus 697 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~~~~ 776 (943)
|.+...+. ....+.+.....+...++-|++++|+. +|+|||+|++||+++.+|++++.|||+++..-.....
T Consensus 82 g~lft~l~---~~~~f~~~~~~~~~aelaLald~lh~l---~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~-- 153 (612)
T KOG0603|consen 82 GDLFTRLS---KEVMFDELDVAFYLAELALALDHLHKL---GIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIA-- 153 (612)
T ss_pred chhhhccc---cCCchHHHHHHHHHHHHHHHHhhcchh---HHHHhcccccceeecccCccccCCchhhhHhHhhhhc--
Confidence 99988886 455678888888888999999999999 9999999999999999999999999999865433222
Q ss_pred eeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccccccCcccccCccCHHHH
Q 002278 777 TFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAV 856 (943)
Q Consensus 777 ~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 856 (943)
+||..|||||++. .+..++|.||||++++||+||..||.. +....+...+..++...+
T Consensus 154 ---cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~----~~~~~Il~~~~~~p~~l~------------- 211 (612)
T KOG0603|consen 154 ---CGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG----DTMKRILKAELEMPRELS------------- 211 (612)
T ss_pred ---ccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch----HHHHHHhhhccCCchhhh-------------
Confidence 7999999999998 678899999999999999999999987 222222222222222222
Q ss_pred HHHHHHHHHccCCCCCCCCC
Q 002278 857 RKTFQLALLCTKRYPSERPT 876 (943)
Q Consensus 857 ~~l~~l~~~cl~~dP~~RPt 876 (943)
.....++..+...+|..|--
T Consensus 212 ~~a~~~~~~l~~r~p~nrLg 231 (612)
T KOG0603|consen 212 AEARSLFRQLFKRNPENRLG 231 (612)
T ss_pred HHHHHHHHHHHhhCHHHHhc
Confidence 23335666777777777753
No 435
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.80 E-value=2.4e-19 Score=176.28 Aligned_cols=185 Identities=14% Similarity=0.077 Sum_probs=139.0
Q ss_pred cceEEeeeceEEEEEEEecCCceEEEEEecccCcc----cHHHHHHHHHHHhcCC-CCCcceeeeEEecCCcceEEEEEc
Q 002278 620 EKYIVGYGASSTVYKCALKNSRPIAVKKLYNQYPH----NLREFETELETIGSIR-HRNIVSLHGYALSPYGNLLFYDYM 694 (943)
Q Consensus 620 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~----~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~ 694 (943)
....|++|+||+||.+.. .+.+++.+.+.....- ....+.+|+++++++. |++|++++++ ...+++|||+
T Consensus 6 ~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmeyI 80 (218)
T PRK12274 6 VNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSYL 80 (218)
T ss_pred cceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEeee
Confidence 456899999999997765 5778887776543221 1125789999999996 5889999886 4579999999
Q ss_pred cCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCC-CCccEEECCCCceeecccccccccCCCCC
Q 002278 695 VNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDV-KSSNILIDENFDAHLSDFGIARCIPTAMP 773 (943)
Q Consensus 695 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dl-kp~Nill~~~~~~kl~DFGla~~~~~~~~ 773 (943)
.|.+|..... . ....++.|++.+++++|+. ||+|||| ||+||+++.++.++|+|||+|........
T Consensus 81 ~G~~L~~~~~----~------~~~~~~~qi~~~L~~lH~~---GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~ 147 (218)
T PRK12274 81 AGAAMYQRPP----R------GDLAYFRAARRLLQQLHRC---GVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRAR 147 (218)
T ss_pred cCccHHhhhh----h------hhHHHHHHHHHHHHHHHHC---cCccCCCCCcceEEEcCCCCEEEEECCCceecCCcch
Confidence 9999865432 1 1235778999999999999 9999999 79999999999999999999986543221
Q ss_pred c----e--------eeeEecccceeCccccccC-CCC-CcchhhhHHHHHHHHHhCCCCCCCC
Q 002278 774 H----A--------STFVLGTIGYIDPEYAHTS-RLN-EKSDVYSFGIVLLEILTGKKAVDNE 822 (943)
Q Consensus 774 ~----~--------~~~~~gt~~y~aPE~~~~~-~~~-~~~DvwSlGvil~elltG~~p~~~~ 822 (943)
. . ......++.|++|+....- ..+ .+.+.++.|+-+|.++|++.|..++
T Consensus 148 ~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~ 210 (218)
T PRK12274 148 WMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWED 210 (218)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCcccc
Confidence 1 0 1112256777888754432 333 6789999999999999998887543
No 436
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.80 E-value=4.6e-19 Score=178.58 Aligned_cols=141 Identities=16% Similarity=0.171 Sum_probs=111.8
Q ss_pred ceEEeeeceEEEEEEEecCCceEEEEEecccCcc--c------------------------HHHHHHHHHHHhcCCCCCc
Q 002278 621 KYIVGYGASSTVYKCALKNSRPIAVKKLYNQYPH--N------------------------LREFETELETIGSIRHRNI 674 (943)
Q Consensus 621 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~------------------------~~~~~~E~~~l~~l~h~ni 674 (943)
...||+|+||.||+|...+|+.||||.+...... . ...+..|.+.+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 4579999999999999878999999998654211 0 1123578999999999988
Q ss_pred ceeeeEEecCCcceEEEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhh-CCCCCeEecCCCCccEEECC
Q 002278 675 VSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHH-DCNPRIIHRDVKSSNILIDE 753 (943)
Q Consensus 675 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~ivH~Dlkp~Nill~~ 753 (943)
.....+... ..++||||++|+++..... ....++..+...++.|++.++.++|+ . ||+||||||+||+++
T Consensus 82 ~~p~~~~~~--~~~lVmE~~~g~~~~~~~l---~~~~~~~~~~~~i~~~l~~~l~~lH~~~---givHrDlkP~NIll~- 152 (190)
T cd05145 82 PVPEPILLK--KNVLVMEFIGDDGSPAPRL---KDVPLEEEEAEELYEQVVEQMRRLYQEA---GLVHGDLSEYNILYH- 152 (190)
T ss_pred CCceEEEec--CCEEEEEEecCCCchhhhh---hhccCCHHHHHHHHHHHHHHHHHHHHhC---CEecCCCChhhEEEE-
Confidence 655544433 3589999999885543321 23457788999999999999999999 8 999999999999999
Q ss_pred CCceeecccccccccCC
Q 002278 754 NFDAHLSDFGIARCIPT 770 (943)
Q Consensus 754 ~~~~kl~DFGla~~~~~ 770 (943)
++.++|+|||+|+....
T Consensus 153 ~~~~~liDFG~a~~~~~ 169 (190)
T cd05145 153 DGKPYIIDVSQAVELDH 169 (190)
T ss_pred CCCEEEEEcccceecCC
Confidence 78999999999986643
No 437
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.79 E-value=7.7e-20 Score=209.83 Aligned_cols=251 Identities=24% Similarity=0.290 Sum_probs=184.1
Q ss_pred ccccceEEeeeceEEEEEEEecCCceEEEEEecccCc-ccHHHHHHHHHH--HhcCCCCCcceeeeEEecCCcceEEEEE
Q 002278 617 NLSEKYIVGYGASSTVYKCALKNSRPIAVKKLYNQYP-HNLREFETELET--IGSIRHRNIVSLHGYALSPYGNLLFYDY 693 (943)
Q Consensus 617 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~--l~~l~h~niv~l~~~~~~~~~~~lv~e~ 693 (943)
+|...+.+|++.|=.|.+|+++.|. |+||++.+..+ -..+.+.++++- ...++|||++++.-+-..+...|+|-+|
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~~t~kAAylvRqy 102 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVLVTDKAAYLVRQY 102 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHHHhhHHHHHHHHH
Confidence 6777788999999999999998776 89999876653 334444443333 5566899999998887777778888888
Q ss_pred ccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccc--cCCC
Q 002278 694 MVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARC--IPTA 771 (943)
Q Consensus 694 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~--~~~~ 771 (943)
+ .-+|+|.+. .+..+...+.+-|+.|++.|+.-+|.. ||+|||||.+|||+++=.=+.|+||..-+. ++.+
T Consensus 103 v-khnLyDRlS---TRPFL~~iEKkWiaFQLL~al~qcH~~---gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeD 175 (1431)
T KOG1240|consen 103 V-KHNLYDRLS---TRPFLVLIEKKWIAFQLLKALSQCHKL---GVCHGDIKSENILITSWNWLYLTDFASFKPTYLPED 175 (1431)
T ss_pred H-hhhhhhhhc---cchHHHHHHHHHHHHHHHHHHHHHHHc---CccccccccceEEEeeechhhhhcccccCCccCCCC
Confidence 7 458999886 445566777778999999999999999 999999999999999887899999977653 2344
Q ss_pred CCceeeeEecc----cceeCccccccC----------C-CCCcchhhhHHHHHHHHHh-CCCCCCCCccHHHHHHHhccc
Q 002278 772 MPHASTFVLGT----IGYIDPEYAHTS----------R-LNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKADD 835 (943)
Q Consensus 772 ~~~~~~~~~gt----~~y~aPE~~~~~----------~-~~~~~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~ 835 (943)
.+...+...-| ..|.|||.+... . .+++-||||+||+++|+++ |++||. +.++.......
T Consensus 176 NPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~----LSQL~aYr~~~ 251 (1431)
T KOG1240|consen 176 NPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFT----LSQLLAYRSGN 251 (1431)
T ss_pred CcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCccc----HHHHHhHhccC
Confidence 44333333222 469999976531 1 5678999999999999998 899986 33333322221
Q ss_pred cccccccCcccccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhc
Q 002278 836 NTVMEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLVSL 887 (943)
Q Consensus 836 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~~ 887 (943)
....+..-..+. ...+..++..|++.||++|-++++.++.-++.
T Consensus 252 ~~~~e~~Le~Ie--------d~~~Rnlil~Mi~rdPs~RlSAedyL~~yrG~ 295 (1431)
T KOG1240|consen 252 ADDPEQLLEKIE--------DVSLRNLILSMIQRDPSKRLSAEDYLQKYRGL 295 (1431)
T ss_pred ccCHHHHHHhCc--------CccHHHHHHHHHccCchhccCHHHHHHhhhcc
Confidence 111111111111 12456899999999999999999999875544
No 438
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.77 E-value=1.5e-18 Score=180.30 Aligned_cols=234 Identities=21% Similarity=0.279 Sum_probs=148.3
Q ss_pred hccccceEEeeeceEEEEEEEecC-CceEEEEEecccC---cccHHHHHHHHHHHhcCC----------CCCcceeeeEE
Q 002278 616 ENLSEKYIVGYGASSTVYKCALKN-SRPIAVKKLYNQY---PHNLREFETELETIGSIR----------HRNIVSLHGYA 681 (943)
Q Consensus 616 ~~~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~----------h~niv~l~~~~ 681 (943)
..+.....||.|+++.||.+++.. ++++|||.+.-.. ....+++.+|.-....+. |-.++-.++..
T Consensus 12 r~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~ 91 (288)
T PF14531_consen 12 RTLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLL 91 (288)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEE
T ss_pred eEEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEE
Confidence 355667889999999999999875 7899999875332 234566776665555532 22333333332
Q ss_pred ecC---------C--------cceEEEEEccCCChhhhccC----CCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeE
Q 002278 682 LSP---------Y--------GNLLFYDYMVNGSLWDLLHG----PSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRII 740 (943)
Q Consensus 682 ~~~---------~--------~~~lv~e~~~~g~L~~~l~~----~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iv 740 (943)
... . ..+++|+-+ .++|.+++.. ......+....+..+..|+++.+++||+. |+|
T Consensus 92 ~i~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~---GlV 167 (288)
T PF14531_consen 92 RIPGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSY---GLV 167 (288)
T ss_dssp EETTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEE
T ss_pred EEcCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhc---ceE
Confidence 211 1 125667766 5688777542 11122344555667889999999999999 999
Q ss_pred ecCCCCccEEECCCCceeecccccccccCCCCCceeeeEecccceeCcccccc--------CCCCCcchhhhHHHHHHHH
Q 002278 741 HRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHT--------SRLNEKSDVYSFGIVLLEI 812 (943)
Q Consensus 741 H~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DvwSlGvil~el 812 (943)
|+||||+|++++.+|.++|+||+.....+..... ...+..|.+||.... -.++.+.|.|++|+++|.|
T Consensus 168 Hgdi~~~nfll~~~G~v~Lg~F~~~~r~g~~~~~----~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~l 243 (288)
T PF14531_consen 168 HGDIKPENFLLDQDGGVFLGDFSSLVRAGTRYRC----SEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSL 243 (288)
T ss_dssp EST-SGGGEEE-TTS-EEE--GGGEEETTEEEEG----GGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHH
T ss_pred ecccceeeEEEcCCCCEEEcChHHHeecCceeec----cCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHH
Confidence 9999999999999999999999988755432111 224578999997643 2478899999999999999
Q ss_pred HhCCCCCCCCccHHHHHHHhccccccccccCcccccCccCHHHHHHHHHHHHHccCCCCCCC
Q 002278 813 LTGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSER 874 (943)
Q Consensus 813 ltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~R 874 (943)
++|+.||+...... .... .+. .|. ..++.+..+|..+++++|.+|
T Consensus 244 WC~~lPf~~~~~~~-------~~~~-------~f~-~C~--~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 244 WCGRLPFGLSSPEA-------DPEW-------DFS-RCR--DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp HHSS-STCCCGGGS-------TSGG-------GGT-TSS-----HHHHHHHHHHT-SSGGGS
T ss_pred HHccCCCCCCCccc-------cccc-------cch-hcC--CcCHHHHHHHHHHccCCcccC
Confidence 99999998543210 0000 111 122 445677889999999999988
No 439
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.77 E-value=8e-19 Score=180.54 Aligned_cols=194 Identities=24% Similarity=0.273 Sum_probs=135.6
Q ss_pred CCCCcceeeeEEecC---------------------------CcceEEEEEccCCChhhhccCCCCCccCCHHHHHHHHH
Q 002278 670 RHRNIVSLHGYALSP---------------------------YGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAV 722 (943)
Q Consensus 670 ~h~niv~l~~~~~~~---------------------------~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~ 722 (943)
+|||||++.++|.+. ...|+||...+ .+|.+++.. ...+.....-++.
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~-~tLr~yl~~----~~~s~r~~~~~la 348 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYR-QTLREYLWT----RHRSYRTGRVILA 348 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcch-hhHHHHHhc----CCCchHHHHHHHH
Confidence 699999999987643 22478888763 588888863 3456677778899
Q ss_pred HHHHHHHHhhhCCCCCeEecCCCCccEEE--CCCC--ceeecccccccccCC---CCCcee--eeEecccceeCcccccc
Q 002278 723 GAAQGLAYLHHDCNPRIIHRDVKSSNILI--DENF--DAHLSDFGIARCIPT---AMPHAS--TFVLGTIGYIDPEYAHT 793 (943)
Q Consensus 723 ~i~~~l~~LH~~~~~~ivH~Dlkp~Nill--~~~~--~~kl~DFGla~~~~~---~~~~~~--~~~~gt~~y~aPE~~~~ 793 (943)
|+++|+.|||.+ ||.|||+|++||++ |+|+ ...|+|||.+---+. ..+..+ -..-|....||||+...
T Consensus 349 QlLEav~hL~~h---gvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta 425 (598)
T KOG4158|consen 349 QLLEAVTHLHKH---GVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATA 425 (598)
T ss_pred HHHHHHHHHHHc---cchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhc
Confidence 999999999999 99999999999999 3443 478999998743211 011111 11236778999998875
Q ss_pred CC------CCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHH--hccccccccccCcccccCccCHHHHHHHHHHHHH
Q 002278 794 SR------LNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMS--KADDNTVMEAVDPEVSVTCVDLSAVRKTFQLALL 865 (943)
Q Consensus 794 ~~------~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ 865 (943)
.+ .-.|+|.|+.|.+.||+++...||++...+.--.+. ..+-..+++.+. ..+.+++..
T Consensus 426 ~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Yqe~qLPalp~~vp-------------p~~rqlV~~ 492 (598)
T KOG4158|consen 426 VPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTYQESQLPALPSRVP-------------PVARQLVFD 492 (598)
T ss_pred CCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhhhhhhhCCCCcccCC-------------hHHHHHHHH
Confidence 33 125899999999999999999999875433221111 111122222222 345578999
Q ss_pred ccCCCCCCCCCHHHHHHHH
Q 002278 866 CTKRYPSERPTMQEVARVL 884 (943)
Q Consensus 866 cl~~dP~~RPt~~el~~~L 884 (943)
.++.||++|++..-....+
T Consensus 493 lL~r~pskRvsp~iAANvl 511 (598)
T KOG4158|consen 493 LLKRDPSKRVSPNIAANVL 511 (598)
T ss_pred HhcCCccccCCccHHHhHH
Confidence 9999999999876655544
No 440
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.76 E-value=1.2e-18 Score=192.43 Aligned_cols=216 Identities=26% Similarity=0.461 Sum_probs=165.2
Q ss_pred HhcCCCCCcceeeeEEecCCcceEEEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCe-EecCC
Q 002278 666 IGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRI-IHRDV 744 (943)
Q Consensus 666 l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i-vH~Dl 744 (943)
|+.+.|.|+.+++|.+.++...++|.+||..|+|.|.+.. ....+++.-...++++|+.||+|+|.. .| .|+.+
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~--~~~~~d~~F~~s~~rdi~~Gl~ylh~s---~i~~hg~l 75 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSN--EDIKLDYFFILSFIRDISKGLAYLHNS---PIGYHGAL 75 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhc--cccCccHHHHHHHHHHHHHHHHHHhcC---cceeeeee
Confidence 3567899999999999999999999999999999999974 345688999999999999999999987 55 99999
Q ss_pred CCccEEECCCCceeecccccccccCC-CCCceeeeEecccceeCccccccCC-------CCCcchhhhHHHHHHHHHhCC
Q 002278 745 KSSNILIDENFDAHLSDFGIARCIPT-AMPHASTFVLGTIGYIDPEYAHTSR-------LNEKSDVYSFGIVLLEILTGK 816 (943)
Q Consensus 745 kp~Nill~~~~~~kl~DFGla~~~~~-~~~~~~~~~~gt~~y~aPE~~~~~~-------~~~~~DvwSlGvil~elltG~ 816 (943)
++.|.++|....+|++|||+...... ..........-..-|.|||.+.+.. .+.++||||||++++|+++.+
T Consensus 76 ~s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~ 155 (484)
T KOG1023|consen 76 KSSNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRS 155 (484)
T ss_pred ccccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhcc
Confidence 99999999999999999999987642 1111111122345799999887631 467899999999999999999
Q ss_pred CCCCCCccH---HHHHHHhccccccccccCcccccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcCCCC
Q 002278 817 KAVDNESNL---HQLIMSKADDNTVMEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLVSLLPAP 891 (943)
Q Consensus 817 ~p~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~~~~~~ 891 (943)
.||+..... .+.+..... .......|.+.... +....+..+++.||..+|++||+++++...++.+....
T Consensus 156 ~~~~~~~~~~~~~eii~~~~~--~~~~~~rP~i~~~~---e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~~~ 228 (484)
T KOG1023|consen 156 GPFDLRNLVEDPDEIILRVKK--GGSNPFRPSIELLN---ELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINKGG 228 (484)
T ss_pred CccccccccCChHHHHHHHHh--cCCCCcCcchhhhh---hcchHHHHHHHHhcccChhhCccHHHHHhhhhhhcccc
Confidence 999843221 223333222 12223344443221 22236788999999999999999999999888766543
No 441
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.76 E-value=1.1e-20 Score=208.59 Aligned_cols=260 Identities=25% Similarity=0.309 Sum_probs=139.1
Q ss_pred CccccccCCCcEEecCCCCCCCC----CCcccCCCCCcceEEecCCCCCC------CCCCCcCCCCcCcEEEcccCcccc
Q 002278 246 PEVIGLMQALAVLDLSENELVGP----IPPILGNLSYTGKLYLHGNKLTG------PIPPELGNMSKLSYLQLQNNQLVG 315 (943)
Q Consensus 246 ~~~l~~l~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~L~~n~l~~------~~~~~~~~l~~L~~L~L~~N~l~~ 315 (943)
...+..+.+|+.|++++|.++.. ++..+...++++.|+++++.+.+ .++..+..+++|+.|++++|.+.+
T Consensus 16 ~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~ 95 (319)
T cd00116 16 TELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGCGLQELDLSDNALGP 95 (319)
T ss_pred HHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcCceeEEEccCCCCCh
Confidence 34445555566666666665431 23344455556666666655542 122344556666667776666654
Q ss_pred ccccccCCccc---ceEEEccccccCC----cCcccccCC-CcCcEEEeeCCcccCc----ccccccccCccceeeccCC
Q 002278 316 TIPAELGKLEQ---LFELNLADNNLEG----PIPHNISSC-TALNQFNVHGNRLSGA----IPSSFRNLGSLTYLNLSRN 383 (943)
Q Consensus 316 ~~~~~~~~l~~---L~~L~L~~N~l~~----~~p~~~~~l-~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~L~~N 383 (943)
..+..+..+.+ |++|++++|++.+ .+...+..+ ++|+.|++++|.+++. ++..+..+++|++|+|++|
T Consensus 96 ~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~n 175 (319)
T cd00116 96 DGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKALRANRDLKELNLANN 175 (319)
T ss_pred hHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHHHHhCCCcCEEECcCC
Confidence 44444444444 6666666666652 222334444 6666666666666522 2334445556666676666
Q ss_pred cCCCC----CCCCCCCCCCccEEecCCCcCCCc----cCCCcccccccceeecccccccccCCcccc-----CCCcccee
Q 002278 384 NFKGK----VPTELGRIINLDTLDLSVNNFSGS----VPASIGDLEHLLTLNLSRNHLNGLLPAEFG-----NLRSIQTI 450 (943)
Q Consensus 384 ~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-----~l~~L~~L 450 (943)
.+++. ++..+...++|+.|++++|.+.+. ++..+..+++|++|++++|.+++.....+. ..+.|+.|
T Consensus 176 ~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~L 255 (319)
T cd00116 176 GIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTDAGAAALASALLSPNISLLTL 255 (319)
T ss_pred CCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCchHHHHHHHHHHhccCCCceEE
Confidence 66532 222233445666666666666532 223344556666777776666542222221 13566777
Q ss_pred cccCccccc----cCChhhhcccccceecccCcccCCC----CCCcCccc-cCCcccccCCccc
Q 002278 451 DMSFNQLSG----SIPAELGQLQNIISLILNNNNLQGG----IPDQLSNC-FSLSNLNVSYNNL 505 (943)
Q Consensus 451 ~Ls~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l-~~L~~L~ls~N~l 505 (943)
++++|.++. .+...+..+++|+.+++++|+++.. ....+... +.|+.+++.+|++
T Consensus 256 ~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (319)
T cd00116 256 SLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFGEEGAQLLAESLLEPGNELESLWVKDDSF 319 (319)
T ss_pred EccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCcHHHHHHHHHHHhhcCCchhhcccCCCCC
Confidence 777776651 2334455556666667777666633 22222233 4666666666653
No 442
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.75 E-value=2.2e-18 Score=198.19 Aligned_cols=208 Identities=24% Similarity=0.291 Sum_probs=149.1
Q ss_pred hhccccceEEeeeceEEEEEEEecC-CceEEEEEecccCcccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEE
Q 002278 615 TENLSEKYIVGYGASSTVYKCALKN-SRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDY 693 (943)
Q Consensus 615 ~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 693 (943)
...|+.++.|..|+||.||.++++. .+.+|+ ++.+..- +.+- ++.....|.+|
T Consensus 82 e~df~~IklisngAygavylvrh~~trqrfa~-kiNkq~l-----ilRn--ilt~a~npfvv------------------ 135 (1205)
T KOG0606|consen 82 ESDFNTIKLISNGAYGAVYLVRHKETRQRFAM-KINKQNL-----ILRN--ILTFAGNPFVV------------------ 135 (1205)
T ss_pred ccccceeEeeccCCCCceeeeeccccccchhh-cccccch-----hhhc--cccccCCccee------------------
Confidence 4578899999999999999999885 456777 4433211 1110 33333445444
Q ss_pred ccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCC-
Q 002278 694 MVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAM- 772 (943)
Q Consensus 694 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~- 772 (943)
|+=.+.++ ..++++.. ++.+++|+|+. +|+|||+||+|.+++.-|++|+.|||+++..-...
T Consensus 136 ---gDc~tllk---~~g~lPvd--------mvla~Eylh~y---givhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~a 198 (1205)
T KOG0606|consen 136 ---GDCATLLK---NIGPLPVD--------MVLAVEYLHSY---GIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLA 198 (1205)
T ss_pred ---chhhhhcc---cCCCCcch--------hhHHhHhhccC---CeecCCCCCCcceeeecccccccchhhhhhhhhhcc
Confidence 33344443 22333322 27889999999 99999999999999999999999999997532111
Q ss_pred -------------CceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhccccccc
Q 002278 773 -------------PHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVM 839 (943)
Q Consensus 773 -------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~ 839 (943)
......++||+.|+|||++....|+..+|+|++|+++||++-|+.||.++.+-+.+-........++
T Consensus 199 tnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i~wp 278 (1205)
T KOG0606|consen 199 TNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWP 278 (1205)
T ss_pred chhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhcccc
Confidence 1112346899999999999999999999999999999999999999998876554444443333344
Q ss_pred cccCcccccCccCHHHHHHHHHHHHHccCCCCCCCC
Q 002278 840 EAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERP 875 (943)
Q Consensus 840 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP 875 (943)
+. +..+. .+..+++...++.+|..|-
T Consensus 279 E~-dea~p---------~Ea~dli~~LL~qnp~~Rl 304 (1205)
T KOG0606|consen 279 EE-DEALP---------PEAQDLIEQLLRQNPLCRL 304 (1205)
T ss_pred cc-CcCCC---------HHHHHHHHHHHHhChHhhc
Confidence 43 33222 3556788899999999995
No 443
>PRK10345 hypothetical protein; Provisional
Probab=99.75 E-value=9e-18 Score=169.44 Aligned_cols=137 Identities=18% Similarity=0.203 Sum_probs=106.6
Q ss_pred cccceEEeeeceEEEEEEEecCCceEEEEEecccCcccHHHHHHHHHHHhcC-----CCCCcceeeeEEecCC---cce-
Q 002278 618 LSEKYIVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSI-----RHRNIVSLHGYALSPY---GNL- 688 (943)
Q Consensus 618 ~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-----~h~niv~l~~~~~~~~---~~~- 688 (943)
++....||+|+||.||. +......+||++........+.+.+|+++++.+ .||||++++|++.++. ..+
T Consensus 4 L~~~~~LG~G~~~~Vy~--hp~~~~k~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~ 81 (210)
T PRK10345 4 LSEQSPLGTGRHRKCYA--HPEDAQRCIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYD 81 (210)
T ss_pred cCCcceecCCCceEEEE--CCCCcCeEEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEE
Confidence 34567899999999995 444344479988665444567899999999999 5799999999998874 223
Q ss_pred EEEEE--ccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHH-HHhhhCCCCCeEecCCCCccEEECC----CCceeecc
Q 002278 689 LFYDY--MVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGL-AYLHHDCNPRIIHRDVKSSNILIDE----NFDAHLSD 761 (943)
Q Consensus 689 lv~e~--~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l-~~LH~~~~~~ivH~Dlkp~Nill~~----~~~~kl~D 761 (943)
+|+|| +.+|+|.+++.. ..+++. ..++.+++.++ +|||++ +||||||||+||+++. ++.++|+|
T Consensus 82 ~I~e~~G~~~~tL~~~l~~----~~~~e~--~~~~~~~L~~l~~yLh~~---~IvhrDlKp~NILl~~~~~~~~~~~LiD 152 (210)
T PRK10345 82 VIADFDGKPSITLTEFAEQ----CRYEED--VAQLRQLLKKLKRYLLDN---RIVTMELKPQNILCQRISESEVIPVVCD 152 (210)
T ss_pred EEecCCCCcchhHHHHHHc----ccccHh--HHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEeccCCCCCcEEEEE
Confidence 68999 557999999963 235555 35677777777 999999 9999999999999974 34799999
Q ss_pred cccc
Q 002278 762 FGIA 765 (943)
Q Consensus 762 FGla 765 (943)
|+.+
T Consensus 153 g~G~ 156 (210)
T PRK10345 153 NIGE 156 (210)
T ss_pred CCCC
Confidence 5443
No 444
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.74 E-value=5.7e-20 Score=202.73 Aligned_cols=83 Identities=22% Similarity=0.245 Sum_probs=45.7
Q ss_pred EEEeeCCccc-ccCCCCccCCCCCcEEeccCCCcCCc----cchhccccccceEEEecCccccc------CCCcccCCCC
Q 002278 66 SIDFQGNKLT-GQIPDEIGNCGSLVHIELSDNSLYGD----IPFSISKLKQLEFLNLKNNQLTG------PIPSTLTQIP 134 (943)
Q Consensus 66 ~L~Ls~n~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~n~l~~------~~~~~~~~l~ 134 (943)
.|+|+.+.++ ...+..|..+.+|+.|+++++.++.. ++..+...++|++|+++++.+.+ .++..+..++
T Consensus 2 ~l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~ 81 (319)
T cd00116 2 QLSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGC 81 (319)
T ss_pred ccccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcC
Confidence 4666666666 23444455666677777777776432 34445555666677776666542 1123344445
Q ss_pred CCcEEEEecccccc
Q 002278 135 NLKTLDLARNQLTG 148 (943)
Q Consensus 135 ~L~~L~Ls~N~l~~ 148 (943)
+|+.|+|++|.+..
T Consensus 82 ~L~~L~l~~~~~~~ 95 (319)
T cd00116 82 GLQELDLSDNALGP 95 (319)
T ss_pred ceeEEEccCCCCCh
Confidence 55555555555543
No 445
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.73 E-value=2.4e-17 Score=194.49 Aligned_cols=199 Identities=20% Similarity=0.214 Sum_probs=160.7
Q ss_pred HHHHHhhccccceEEeeeceEEEEEEEecCCceEEEEEecccCcccHHHHHHHHHHHhcCC---CCCcceeeeEEecCCc
Q 002278 610 DIMRSTENLSEKYIVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSIR---HRNIVSLHGYALSPYG 686 (943)
Q Consensus 610 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~ 686 (943)
++....+.|.+.+.||+|+||+||.|...+++.||+|+-+.... -+|.=-.+++.+|+ -+-|..+...+.-.+.
T Consensus 692 ~~~~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~---WEfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~ 768 (974)
T KOG1166|consen 692 EFEVGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNP---WEFYICLQVMERLKPQMLPSIMHISSAHVFQNA 768 (974)
T ss_pred eeeecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCc---eeeeehHHHHHhhchhhhcchHHHHHHHccCCc
Confidence 34445677888999999999999999988899999998765432 22322234444554 3556666666677778
Q ss_pred ceEEEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEEC-------CCCceee
Q 002278 687 NLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILID-------ENFDAHL 759 (943)
Q Consensus 687 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~-------~~~~~kl 759 (943)
-++|+||.+.|+|.|++. .....+|.-+..++.|++..+++||.. +||||||||+|+|+. +...++|
T Consensus 769 S~lv~ey~~~Gtlld~~N---~~~~m~e~lv~~~~~qml~ive~lH~~---~IIHgDiKPDNfll~~~~~~~~~~~~l~l 842 (974)
T KOG1166|consen 769 SVLVSEYSPYGTLLDLIN---TNKVMDEYLVMFFSCQMLRIVEHLHAM---GIIHGDIKPDNFLLRREICADSDSKGLYL 842 (974)
T ss_pred ceeeeeccccccHHHhhc---cCCCCCchhhhHHHHHHHHHHHHHHhc---ceecccCCcceeEeecccCCCCcccceEE
Confidence 899999999999999997 455689999999999999999999999 999999999999994 2345999
Q ss_pred cccccccccCCC-CCceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCC
Q 002278 760 SDFGIARCIPTA-MPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKK 817 (943)
Q Consensus 760 ~DFGla~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~ 817 (943)
+|||.+-.+.-- ........++|-.+-.+|...|.+++.++|.|.++.+++-|+.|+.
T Consensus 843 IDfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y 901 (974)
T KOG1166|consen 843 IDFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKY 901 (974)
T ss_pred EecccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHH
Confidence 999999765321 1234456778999999999999999999999999999999999854
No 446
>smart00090 RIO RIO-like kinase.
Probab=99.70 E-value=7.2e-17 Score=167.36 Aligned_cols=142 Identities=15% Similarity=0.130 Sum_probs=111.0
Q ss_pred ccccceEEeeeceEEEEEEE--ecCCceEEEEEecccCcc------------------------cHHHHHHHHHHHhcCC
Q 002278 617 NLSEKYIVGYGASSTVYKCA--LKNSRPIAVKKLYNQYPH------------------------NLREFETELETIGSIR 670 (943)
Q Consensus 617 ~~~~~~~lG~G~~g~Vy~~~--~~~~~~vavK~~~~~~~~------------------------~~~~~~~E~~~l~~l~ 670 (943)
-|.+.+.||+|+||.||+|. ..+|+.||+|++...... ....+.+|++.++++.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 47788899999999999998 457899999988643210 0123568999999997
Q ss_pred CCC--cceeeeEEecCCcceEEEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCC-eEecCCCCc
Q 002278 671 HRN--IVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPR-IIHRDVKSS 747 (943)
Q Consensus 671 h~n--iv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~-ivH~Dlkp~ 747 (943)
+.. +.+++++ ...++||||++++++..... ........++..++.|++.++++||+. + |+||||||+
T Consensus 109 ~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~---~~~~~~~~~~~~i~~qi~~~l~~LH~~---g~iiH~Dikp~ 178 (237)
T smart00090 109 EAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRL---KDVEPEEEEEFELYDDILEEMRKLYKE---GELVHGDLSEY 178 (237)
T ss_pred hcCCCCCeeeEe----cCceEEEEEecCCccccccc---ccCCcchHHHHHHHHHHHHHHHHHHhc---CCEEeCCCChh
Confidence 533 3444443 24589999999988876542 223456667789999999999999999 9 999999999
Q ss_pred cEEECCCCceeecccccccccC
Q 002278 748 NILIDENFDAHLSDFGIARCIP 769 (943)
Q Consensus 748 Nill~~~~~~kl~DFGla~~~~ 769 (943)
||+++ ++.++++|||.|....
T Consensus 179 NIli~-~~~i~LiDFg~a~~~~ 199 (237)
T smart00090 179 NILVH-DGKVVIIDVSQSVELD 199 (237)
T ss_pred hEEEE-CCCEEEEEChhhhccC
Confidence 99999 8899999999987543
No 447
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.70 E-value=3.6e-18 Score=184.23 Aligned_cols=177 Identities=24% Similarity=0.343 Sum_probs=135.4
Q ss_pred cceEEEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccc
Q 002278 686 GNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIA 765 (943)
Q Consensus 686 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla 765 (943)
..||.|++|..++|.+++.+.+.....++...+.++.|++.|++| + +.+|||+||.||+...+..+||.|||+.
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k---~~ihrdlkp~nif~~~d~q~kIgDFgl~ 403 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---K---GLIHRDLKPSNIFFSDDDQLKIGDFGLV 403 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---c---cchhhhccccccccccchhhhhhhhhhe
Confidence 468999999999999999877777778899999999999999999 6 8999999999999999999999999999
Q ss_pred cccCCCC-----CceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHh-CCCCCCCCccHHHHHHHhccccccc
Q 002278 766 RCIPTAM-----PHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILT-GKKAVDNESNLHQLIMSKADDNTVM 839 (943)
Q Consensus 766 ~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~ 839 (943)
....... ....+...||..||+||.+.+..|+.++||||||++++|+++ -..+++..... .....+.++
T Consensus 404 ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er~~t~-----~d~r~g~ip 478 (516)
T KOG1033|consen 404 TSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFERIATL-----TDIRDGIIP 478 (516)
T ss_pred eecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHHHHhh-----hhhhcCCCC
Confidence 8775544 233455679999999999999999999999999999999997 22322211100 011122222
Q ss_pred cccCcccccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002278 840 EAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARV 883 (943)
Q Consensus 840 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~ 883 (943)
+ .+..+. ..-..++.+++++.|.+||++.++..+
T Consensus 479 ~----~~~~d~------p~e~~ll~~lls~~p~~RP~~~~~~~~ 512 (516)
T KOG1033|consen 479 P----EFLQDY------PEEYTLLQQLLSPSPEERPSAIEVALH 512 (516)
T ss_pred h----HHhhcC------cHHHHHHHHhcCCCcccCchHHHHhhh
Confidence 1 221111 223478999999999999966555443
No 448
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.68 E-value=2.5e-16 Score=162.24 Aligned_cols=134 Identities=19% Similarity=0.283 Sum_probs=112.9
Q ss_pred eEEeeeceEEEEEEEecCCceEEEEEecccCcc--------cHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEE
Q 002278 622 YIVGYGASSTVYKCALKNSRPIAVKKLYNQYPH--------NLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDY 693 (943)
Q Consensus 622 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 693 (943)
+.||+|++|.||+|.. .+..|++|+....... ....+.+|++++..+.|++|.....++......+++|||
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 80 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY 80 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence 4689999999999987 5778999976543221 123577899999999999998888887777888999999
Q ss_pred ccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccc
Q 002278 694 MVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARC 767 (943)
Q Consensus 694 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~ 767 (943)
++|++|.+++... .+ .+..++.+++.+++++|+. +++|||++|.||+++ ++.++++|||.++.
T Consensus 81 ~~G~~L~~~~~~~------~~-~~~~i~~~i~~~l~~lH~~---~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 81 IEGEPLKDLINSN------GM-EELELSREIGRLVGKLHSA---GIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred eCCcCHHHHHHhc------cH-HHHHHHHHHHHHHHHHHhC---CcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 9999999988521 12 7889999999999999999 999999999999999 78899999998864
No 449
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.66 E-value=4.1e-16 Score=158.53 Aligned_cols=144 Identities=15% Similarity=0.147 Sum_probs=111.9
Q ss_pred HHHHHhhccccceEEeeeceEEEEEEEecCCceEEEEEecccCcc----------------------cHHHHHHHHHHHh
Q 002278 610 DIMRSTENLSEKYIVGYGASSTVYKCALKNSRPIAVKKLYNQYPH----------------------NLREFETELETIG 667 (943)
Q Consensus 610 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~----------------------~~~~~~~E~~~l~ 667 (943)
++......|...+.||+|+||.||+|..++++.||||++...... .......|+.++.
T Consensus 9 ~~~~~~~~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 88 (198)
T cd05144 9 TLVKRGVVESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALK 88 (198)
T ss_pred HHHHcCchhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHH
Confidence 344444457778899999999999999888999999986532210 1123567888888
Q ss_pred cCCCCC--cceeeeEEecCCcceEEEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCC
Q 002278 668 SIRHRN--IVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVK 745 (943)
Q Consensus 668 ~l~h~n--iv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk 745 (943)
.+.|++ +...++ ....++||||+++++|.++... .....++.+++.++.++|+. +|+|||||
T Consensus 89 ~l~~~~i~v~~~~~----~~~~~lv~e~~~g~~L~~~~~~---------~~~~~~~~~i~~~l~~lh~~---gi~H~Dl~ 152 (198)
T cd05144 89 ALYEEGFPVPKPID----WNRHAVVMEYIDGVELYRVRVL---------EDPEEVLDEILEEIVKAYKH---GIIHGDLS 152 (198)
T ss_pred HHHHcCCCCCceee----cCCceEEEEEeCCcchhhcccc---------ccHHHHHHHHHHHHHHHHHC---CCCcCCCC
Confidence 888774 444443 2456899999999998765420 33567889999999999998 99999999
Q ss_pred CccEEECCCCceeecccccccccC
Q 002278 746 SSNILIDENFDAHLSDFGIARCIP 769 (943)
Q Consensus 746 p~Nill~~~~~~kl~DFGla~~~~ 769 (943)
|+||++++++.++|+|||.+....
T Consensus 153 p~Nill~~~~~~~liDfg~~~~~~ 176 (198)
T cd05144 153 EFNILVDDDEKIYIIDWPQMVSTD 176 (198)
T ss_pred cccEEEcCCCcEEEEECCccccCC
Confidence 999999999999999999996544
No 450
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.66 E-value=3e-16 Score=160.07 Aligned_cols=130 Identities=18% Similarity=0.298 Sum_probs=106.6
Q ss_pred EeeeceEEEEEEEecCCceEEEEEecccCc-c-------cHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEEcc
Q 002278 624 VGYGASSTVYKCALKNSRPIAVKKLYNQYP-H-------NLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMV 695 (943)
Q Consensus 624 lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~-------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 695 (943)
||+|+||.||+|.+ ++..|++|+...... . ...++.+|+++++.++|+++.....++......+++|||++
T Consensus 2 ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~~ 80 (199)
T TIGR03724 2 IAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYIE 80 (199)
T ss_pred CCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEEC
Confidence 79999999999985 467899998654321 1 12456789999999998887666666666777899999999
Q ss_pred CCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeeccccccccc
Q 002278 696 NGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCI 768 (943)
Q Consensus 696 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~ 768 (943)
|++|.+++... .. .++.+++.+|+++|+. +++|||++|.||+++ ++.++++|||+++..
T Consensus 81 g~~l~~~~~~~---~~-------~~~~~i~~~l~~lH~~---gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~~ 139 (199)
T TIGR03724 81 GKPLKDVIEEG---ND-------ELLREIGRLVGKLHKA---GIVHGDLTTSNIIVR-DDKLYLIDFGLGKYS 139 (199)
T ss_pred CccHHHHHhhc---HH-------HHHHHHHHHHHHHHHC---CeecCCCCcceEEEE-CCcEEEEECCCCcCC
Confidence 99999887521 10 7899999999999999 999999999999999 789999999998753
No 451
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.64 E-value=9.5e-16 Score=179.81 Aligned_cols=137 Identities=19% Similarity=0.296 Sum_probs=112.2
Q ss_pred hhccccceEEeeeceEEEEEEEecCCceEEEEEe-cccCc-------ccHHHHHHHHHHHhcCCCCCcceeeeEEecCCc
Q 002278 615 TENLSEKYIVGYGASSTVYKCALKNSRPIAVKKL-YNQYP-------HNLREFETELETIGSIRHRNIVSLHGYALSPYG 686 (943)
Q Consensus 615 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~-~~~~~-------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 686 (943)
...|...+.||+|+||+||+|.+.... +++|+. .+... ...+.+.+|+++++.++|++++....++.....
T Consensus 332 ~~~~~~~~~iG~G~~g~Vy~~~~~~~~-~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~ 410 (535)
T PRK09605 332 KRRKIPDHLIGKGAEADIKKGEYLGRD-AVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEE 410 (535)
T ss_pred ccccCccceeccCCcEEEEEEeecCcc-ceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCC
Confidence 445567789999999999999876443 444433 22111 113467899999999999999988888888778
Q ss_pred ceEEEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeeccccccc
Q 002278 687 NLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIAR 766 (943)
Q Consensus 687 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~ 766 (943)
.++||||+++++|.+++. ....++.+++++++|||+. +++|||+||+||++ +++.++|+|||+++
T Consensus 411 ~~lv~E~~~g~~L~~~l~-----------~~~~~~~~i~~~L~~lH~~---giiHrDlkp~NILl-~~~~~~liDFGla~ 475 (535)
T PRK09605 411 KTIVMEYIGGKDLKDVLE-----------GNPELVRKVGEIVAKLHKA---GIVHGDLTTSNFIV-RDDRLYLIDFGLGK 475 (535)
T ss_pred CEEEEEecCCCcHHHHHH-----------HHHHHHHHHHHHHHHHHhC---CCccCCCChHHEEE-ECCcEEEEeCcccc
Confidence 899999999999998874 3567899999999999999 99999999999999 67899999999997
Q ss_pred c
Q 002278 767 C 767 (943)
Q Consensus 767 ~ 767 (943)
.
T Consensus 476 ~ 476 (535)
T PRK09605 476 Y 476 (535)
T ss_pred c
Confidence 5
No 452
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.56 E-value=2.5e-14 Score=138.88 Aligned_cols=135 Identities=19% Similarity=0.154 Sum_probs=114.1
Q ss_pred cceEEeeeceEEEEEEEecCCceEEEEEecccCcccHHHHHHHHHHHhcCCC--CCcceeeeEEecCCcceEEEEEccCC
Q 002278 620 EKYIVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSIRH--RNIVSLHGYALSPYGNLLFYDYMVNG 697 (943)
Q Consensus 620 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~~~~lv~e~~~~g 697 (943)
+.+.||+|.++.||++...+ ..+++|....... ...+.+|+.+++.++| .++++++++....+..+++|||++++
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~ 78 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGE 78 (155)
T ss_pred cceecccccccceEEEEecC-CeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCe
Confidence 35679999999999999864 7899998765433 5678899999999976 58999999888888899999999887
Q ss_pred ChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccc
Q 002278 698 SLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARC 767 (943)
Q Consensus 698 ~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~ 767 (943)
.+..+ +......++.+++++++++|.....+++|||++|+||+++..+.++++|||.++.
T Consensus 79 ~~~~~----------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 79 TLDEV----------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred ecccC----------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 76543 5567788899999999999986445799999999999999989999999998864
No 453
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.56 E-value=1.5e-16 Score=171.36 Aligned_cols=195 Identities=30% Similarity=0.491 Sum_probs=165.0
Q ss_pred CCcCcEEEcccCccccccccccCCcccceEEEccccccCCcCcccccCCCcCcEEEeeCCcccCcccccccccCccceee
Q 002278 300 MSKLSYLQLQNNQLVGTIPAELGKLEQLFELNLADNNLEGPIPHNISSCTALNQFNVHGNRLSGAIPSSFRNLGSLTYLN 379 (943)
Q Consensus 300 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 379 (943)
+.--...||+.|++. .+|..++.+..|+.+.|..|.|. .+|..++++..|++|+|+.|+++ ..|..++.|+ |+.|-
T Consensus 74 ltdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli 149 (722)
T KOG0532|consen 74 LTDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVLI 149 (722)
T ss_pred ccchhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeEE
Confidence 444567888888888 78888888888888889999887 78888899999999999999998 6777788776 89999
Q ss_pred ccCCcCCCCCCCCCCCCCCccEEecCCCcCCCccCCCcccccccceeecccccccccCCccccCCCccceecccCccccc
Q 002278 380 LSRNNFKGKVPTELGRIINLDTLDLSVNNFSGSVPASIGDLEHLLTLNLSRNHLNGLLPAEFGNLRSIQTIDMSFNQLSG 459 (943)
Q Consensus 380 L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 459 (943)
+++|+++ .+|..++.+..|..||.+.|.+. .+|..++++..|+.|++..|++. .+|.++..| .|..||+|.|+++
T Consensus 150 ~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~El~~L-pLi~lDfScNkis- 224 (722)
T KOG0532|consen 150 VSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEELCSL-PLIRLDFSCNKIS- 224 (722)
T ss_pred EecCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCHHHhCC-ceeeeecccCcee-
Confidence 9999998 78889998899999999999998 68888999999999999999998 567777766 4899999999998
Q ss_pred cCChhhhcccccceecccCcccCCCCCCcCccc---cCCcccccCCcc
Q 002278 460 SIPAELGQLQNIISLILNNNNLQGGIPDQLSNC---FSLSNLNVSYNN 504 (943)
Q Consensus 460 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l---~~L~~L~ls~N~ 504 (943)
.+|.+|.+|+.|++|-|.+|.|+ .+|..++.. .=.++|+....+
T Consensus 225 ~iPv~fr~m~~Lq~l~LenNPLq-SPPAqIC~kGkVHIFKyL~~qA~q 271 (722)
T KOG0532|consen 225 YLPVDFRKMRHLQVLQLENNPLQ-SPPAQICEKGKVHIFKYLSTQACQ 271 (722)
T ss_pred ecchhhhhhhhheeeeeccCCCC-CChHHHHhccceeeeeeecchhcc
Confidence 89999999999999999999998 677776533 334667766664
No 454
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.55 E-value=2e-14 Score=145.05 Aligned_cols=136 Identities=18% Similarity=0.183 Sum_probs=97.9
Q ss_pred ceEEeeeceEEEEEEEecCCceEEEEEecccCccc--HHH----------------------HHHHHHHHhcCCCCC--c
Q 002278 621 KYIVGYGASSTVYKCALKNSRPIAVKKLYNQYPHN--LRE----------------------FETELETIGSIRHRN--I 674 (943)
Q Consensus 621 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--~~~----------------------~~~E~~~l~~l~h~n--i 674 (943)
.+.||+|+||+||+|...+++.||||++....... ... ...|.+.+..+.+.. +
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 35799999999999998889999999876432111 111 134555666654433 4
Q ss_pred ceeeeEEecCCcceEEEEEccCCChhhh-ccCCCCCccCCHHHHHHHHHHHHHHHHHhhh-CCCCCeEecCCCCccEEEC
Q 002278 675 VSLHGYALSPYGNLLFYDYMVNGSLWDL-LHGPSKKVKLDWETRLKIAVGAAQGLAYLHH-DCNPRIIHRDVKSSNILID 752 (943)
Q Consensus 675 v~l~~~~~~~~~~~lv~e~~~~g~L~~~-l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~ivH~Dlkp~Nill~ 752 (943)
.+.+++ ...++||||++++.+... +... ... .+...++.+++.++.++|+ . +|+||||||+||+++
T Consensus 82 ~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~----~~~-~~~~~~~~~~~~~l~~lh~~~---~ivH~Dl~p~Nili~ 149 (187)
T cd05119 82 PKPIDL----NRHVLVMEFIGGDGIPAPRLKDV----RLL-EDPEELYDQILELMRKLYREA---GLVHGDLSEYNILVD 149 (187)
T ss_pred CceEec----CCCEEEEEEeCCCCccChhhhhh----hhc-ccHHHHHHHHHHHHHHHhhcc---CcCcCCCChhhEEEE
Confidence 444433 246899999998654321 2110 011 5678899999999999999 7 999999999999999
Q ss_pred CCCceeecccccccccC
Q 002278 753 ENFDAHLSDFGIARCIP 769 (943)
Q Consensus 753 ~~~~~kl~DFGla~~~~ 769 (943)
++.++++|||.+....
T Consensus 150 -~~~~~liDfg~a~~~~ 165 (187)
T cd05119 150 -DGKVYIIDVPQAVEID 165 (187)
T ss_pred -CCcEEEEECccccccc
Confidence 8899999999997553
No 455
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.54 E-value=8.6e-16 Score=178.75 Aligned_cols=261 Identities=23% Similarity=0.253 Sum_probs=190.6
Q ss_pred hhccccceEEeeeceEEEEEEEecCC--ceEEEEEecccC--cccHHHHHHHHHHHhcCC-CCCcceeeeEEecCCcceE
Q 002278 615 TENLSEKYIVGYGASSTVYKCALKNS--RPIAVKKLYNQY--PHNLREFETELETIGSIR-HRNIVSLHGYALSPYGNLL 689 (943)
Q Consensus 615 ~~~~~~~~~lG~G~~g~Vy~~~~~~~--~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~l 689 (943)
...|...+.||+|+|+.|-.+..... ..+|+|.+.... .........|..+-..+. |+|++.+++........++
T Consensus 19 ~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~ 98 (601)
T KOG0590|consen 19 NSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLL 98 (601)
T ss_pred cccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCccccc
Confidence 44677777899999999988876433 445666554332 233344555777766776 9999999999999999999
Q ss_pred EEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhh-hCCCCCeEecCCCCccEEECCCC-ceeecccccccc
Q 002278 690 FYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLH-HDCNPRIIHRDVKSSNILIDENF-DAHLSDFGIARC 767 (943)
Q Consensus 690 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH-~~~~~~ivH~Dlkp~Nill~~~~-~~kl~DFGla~~ 767 (943)
..+|..+|++.+.+... .....+......++.|+..++.|+| .. +++|||+||+|.+++..+ ..+++|||+|..
T Consensus 99 ~~~~s~g~~~f~~i~~~-~~~~~~~~~~~~~~~ql~s~l~~~H~~~---~~~h~~ikP~n~~l~~s~~~l~~~df~~At~ 174 (601)
T KOG0590|consen 99 SLSYSDGGSLFSKISHP-DSTGTSSSSASRYLPQLNSGLSYLHPEN---GVTHRDIKPSNSLLDESGSALKIADFGLATA 174 (601)
T ss_pred ccCcccccccccccccC-CccCCCCcchhhhhhhhccCccccCccc---ccccCCCCCccchhccCCCcccCCCchhhcc
Confidence 99999999999988311 1114566777889999999999999 77 999999999999999999 999999999998
Q ss_pred cCC--CCCceeeeEec-ccceeCccccccC-CCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhc-ccccccccc
Q 002278 768 IPT--AMPHASTFVLG-TIGYIDPEYAHTS-RLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKA-DDNTVMEAV 842 (943)
Q Consensus 768 ~~~--~~~~~~~~~~g-t~~y~aPE~~~~~-~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~-~~~~~~~~~ 842 (943)
+.. +........+| ++.|+|||...+. ...+..|+||.|+++.-+++|..||+............. .........
T Consensus 175 ~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (601)
T KOG0590|consen 175 YRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWKSNKGRFTQLP 254 (601)
T ss_pred ccccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccceeecccccccccCc
Confidence 765 33333445568 9999999999884 456889999999999999999999975432221100000 000111111
Q ss_pred CcccccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcC
Q 002278 843 DPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLVSLL 888 (943)
Q Consensus 843 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~~~ 888 (943)
+..+. ....++...++..+|..|.+..++...-+...
T Consensus 255 ~~~~~---------~~~~~~l~k~l~~~~~~r~s~~~~~~d~~~~~ 291 (601)
T KOG0590|consen 255 WNSIS---------DQAHDLLHKILKENPSNRLSIEELKLDNWLSS 291 (601)
T ss_pred cccCC---------hhhhhcccccccCCchhccccccccccccccc
Confidence 11111 23456788888899999999999877655443
No 456
>PLN03150 hypothetical protein; Provisional
Probab=99.54 E-value=1.1e-14 Score=172.56 Aligned_cols=141 Identities=32% Similarity=0.542 Sum_probs=119.2
Q ss_pred cccccccCccccCCCCCCCCCCCCC----CcceeEecCC--C--CcEEEEEcCCCCCccccCCCcCCCCCCCEEEeeCCc
Q 002278 2 AIKASFSNLANVLLDWDDVHNSDFC----SWRGVFCDNS--S--LSVVSLNLSSLNLGGEISPSIGDLRNLQSIDFQGNK 73 (943)
Q Consensus 2 ~~~~~~~~~~~~~~~w~~~~~~~~c----~w~gv~c~~~--~--~~v~~L~l~~~~~~~~~~~~l~~l~~L~~L~Ls~n~ 73 (943)
+||+++.++.. .+|.+ ..|| .|.||.|... . ..|+.|+|++|++.|.+|+.++.+++|+.|+|++|+
T Consensus 379 ~~k~~~~~~~~--~~W~g---~~C~p~~~~w~Gv~C~~~~~~~~~~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~ 453 (623)
T PLN03150 379 TLKSSLGLPLR--FGWNG---DPCVPQQHPWSGADCQFDSTKGKWFIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNS 453 (623)
T ss_pred HHHHhcCCccc--CCCCC---CCCCCcccccccceeeccCCCCceEEEEEECCCCCccccCCHHHhCCCCCCEEECCCCc
Confidence 46777776542 48963 3443 7999999532 2 358999999999999999999999999999999999
Q ss_pred ccccCCCCccCCCCCcEEeccCCCcCCccchhccccccceEEEecCcccccCCCcccCCC-CCCcEEEEeccccc
Q 002278 74 LTGQIPDEIGNCGSLVHIELSDNSLYGDIPFSISKLKQLEFLNLKNNQLTGPIPSTLTQI-PNLKTLDLARNQLT 147 (943)
Q Consensus 74 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l-~~L~~L~Ls~N~l~ 147 (943)
|+|.+|..++.+++|+.|+|++|++++.+|..+++|++|+.|+|++|++++.+|..+..+ .++..+++++|...
T Consensus 454 l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~~~~~~~~l~~~~N~~l 528 (623)
T PLN03150 454 IRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAALGGRLLHRASFNFTDNAGL 528 (623)
T ss_pred ccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcCCcccccCChHHhhccccCceEEecCCccc
Confidence 999999999999999999999999999999999999999999999999999999888764 46778888888643
No 457
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.53 E-value=4.9e-14 Score=146.57 Aligned_cols=135 Identities=16% Similarity=0.144 Sum_probs=105.0
Q ss_pred ceEEe-eeceEEEEEEEecCCceEEEEEecccC-------------cccHHHHHHHHHHHhcCCCCCc--ceeeeEEecC
Q 002278 621 KYIVG-YGASSTVYKCALKNSRPIAVKKLYNQY-------------PHNLREFETELETIGSIRHRNI--VSLHGYALSP 684 (943)
Q Consensus 621 ~~~lG-~G~~g~Vy~~~~~~~~~vavK~~~~~~-------------~~~~~~~~~E~~~l~~l~h~ni--v~l~~~~~~~ 684 (943)
.+.|| .|+.|+||.+... +..+|||.+.... ......+.+|+++++.++|++| +..+++....
T Consensus 36 ~~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred CceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 45788 9999999999875 6788998774311 1223467889999999998875 6677765433
Q ss_pred Cc----ceEEEEEccC-CChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceee
Q 002278 685 YG----NLLFYDYMVN-GSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHL 759 (943)
Q Consensus 685 ~~----~~lv~e~~~~-g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl 759 (943)
.. .++|||+++| .+|.+++.. ..++.. .+.+++.++++||+. ||+||||||+|||++.++.++|
T Consensus 115 ~~~~~~~~lV~e~l~G~~~L~~~l~~----~~l~~~----~~~~i~~~l~~lH~~---GI~HrDlkp~NILv~~~~~v~L 183 (239)
T PRK01723 115 HGLFYRADILIERIEGARDLVALLQE----APLSEE----QWQAIGQLIARFHDA---GVYHADLNAHNILLDPDGKFWL 183 (239)
T ss_pred cCcceeeeEEEEecCCCCCHHHHHhc----CCCCHH----HHHHHHHHHHHHHHC---CCCCCCCCchhEEEcCCCCEEE
Confidence 22 2599999997 689888752 234443 356899999999999 9999999999999999889999
Q ss_pred cccccccc
Q 002278 760 SDFGIARC 767 (943)
Q Consensus 760 ~DFGla~~ 767 (943)
+|||.++.
T Consensus 184 IDfg~~~~ 191 (239)
T PRK01723 184 IDFDRGEL 191 (239)
T ss_pred EECCCccc
Confidence 99998864
No 458
>PLN03150 hypothetical protein; Provisional
Probab=99.53 E-value=1.1e-14 Score=172.33 Aligned_cols=119 Identities=34% Similarity=0.553 Sum_probs=96.2
Q ss_pred ccceeecccccccccCCccccCCCccceecccCccccccCChhhhcccccceecccCcccCCCCCCcCccccCCcccccC
Q 002278 422 HLLTLNLSRNHLNGLLPAEFGNLRSIQTIDMSFNQLSGSIPAELGQLQNIISLILNNNNLQGGIPDQLSNCFSLSNLNVS 501 (943)
Q Consensus 422 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls 501 (943)
.++.|+|++|.+++.+|..+..+++|+.|+|++|+|+|.+|..++.+++|+.|+|++|+++|.+|+.++++++|+.|+|+
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls 498 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLN 498 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECc
Confidence 46778888888888888888888888888888888888888888888888888888888888888888888888888888
Q ss_pred CccccccCCCCcc--cCcCCCCccccCCCCCCCCCCCccCC
Q 002278 502 YNNLSGIIPPIRN--FSRFSSNSFIGNPLLCGNWIGSICGP 540 (943)
Q Consensus 502 ~N~l~~~~~~~~~--~~~~~~~~~~~Np~~c~~~~~~~c~~ 540 (943)
+|+|+|.+|.... ...+....+.+|+.+||.+.-..|..
T Consensus 499 ~N~l~g~iP~~l~~~~~~~~~l~~~~N~~lc~~p~l~~C~~ 539 (623)
T PLN03150 499 GNSLSGRVPAALGGRLLHRASFNFTDNAGLCGIPGLRACGP 539 (623)
T ss_pred CCcccccCChHHhhccccCceEEecCCccccCCCCCCCCcc
Confidence 8888888775311 22344567899999999876667853
No 459
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.52 E-value=5.3e-16 Score=167.17 Aligned_cols=180 Identities=28% Similarity=0.450 Sum_probs=164.9
Q ss_pred CcccceEEEccccccCCcCcccccCCCcCcEEEeeCCcccCcccccccccCccceeeccCCcCCCCCCCCCCCCCCccEE
Q 002278 323 KLEQLFELNLADNNLEGPIPHNISSCTALNQFNVHGNRLSGAIPSSFRNLGSLTYLNLSRNNFKGKVPTELGRIINLDTL 402 (943)
Q Consensus 323 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 402 (943)
.+.--...+|+.|++. .+|..++.+..|+.+.|+.|.|. .+|.+++++..|++|+|+.|+++ .+|..++.++ |+.|
T Consensus 73 ~ltdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvl 148 (722)
T KOG0532|consen 73 DLTDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVL 148 (722)
T ss_pred cccchhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeE
Confidence 3445567899999998 88999999999999999999998 78999999999999999999999 7888888875 8999
Q ss_pred ecCCCcCCCccCCCcccccccceeecccccccccCCccccCCCccceecccCccccccCChhhhcccccceecccCcccC
Q 002278 403 DLSVNNFSGSVPASIGDLEHLLTLNLSRNHLNGLLPAEFGNLRSIQTIDMSFNQLSGSIPAELGQLQNIISLILNNNNLQ 482 (943)
Q Consensus 403 ~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 482 (943)
-+++|+++ .+|..++.+..|..||.|.|.+. .+|..+++|.+|+.|++..|++. .+|.+++.|+ |..||++.|+++
T Consensus 149 i~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~El~~Lp-Li~lDfScNkis 224 (722)
T KOG0532|consen 149 IVSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEELCSLP-LIRLDFSCNKIS 224 (722)
T ss_pred EEecCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCHHHhCCc-eeeeecccCcee
Confidence 99999999 78999999999999999999998 68889999999999999999998 7899999776 999999999999
Q ss_pred CCCCCcCccccCCcccccCCccccccCCC
Q 002278 483 GGIPDQLSNCFSLSNLNVSYNNLSGIIPP 511 (943)
Q Consensus 483 ~~~p~~~~~l~~L~~L~ls~N~l~~~~~~ 511 (943)
.+|-.|.+|..|++|-|.+|+|+..+..
T Consensus 225 -~iPv~fr~m~~Lq~l~LenNPLqSPPAq 252 (722)
T KOG0532|consen 225 -YLPVDFRKMRHLQVLQLENNPLQSPPAQ 252 (722)
T ss_pred -ecchhhhhhhhheeeeeccCCCCCChHH
Confidence 8899999999999999999999976654
No 460
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.43 E-value=1.7e-13 Score=155.55 Aligned_cols=180 Identities=34% Similarity=0.584 Sum_probs=102.8
Q ss_pred CCCcceEEecCCCCCCCCCCCcCCCC-cCcEEEcccCccccccccccCCcccceEEEccccccCCcCcccccCCCcCcEE
Q 002278 276 LSYTGKLYLHGNKLTGPIPPELGNMS-KLSYLQLQNNQLVGTIPAELGKLEQLFELNLADNNLEGPIPHNISSCTALNQF 354 (943)
Q Consensus 276 l~~L~~L~L~~n~l~~~~~~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 354 (943)
++.++.|++.+|.++ .++.....+. +|+.|++++|++. .+|..+..+++|+.|++++|++. .+|.....+++|+.|
T Consensus 115 ~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N~l~-~l~~~~~~~~~L~~L 191 (394)
T COG4886 115 LTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFNDLS-DLPKLLSNLSNLNNL 191 (394)
T ss_pred ccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCchhh-hhhhhhhhhhhhhhe
Confidence 344555555555555 3333444442 5666666666665 44445555666666666666665 333333355666666
Q ss_pred EeeCCcccCcccccccccCccceeeccCCcCCCCCCCCCCCCCCccEEecCCCcCCCccCCCcccccccceeeccccccc
Q 002278 355 NVHGNRLSGAIPSSFRNLGSLTYLNLSRNNFKGKVPTELGRIINLDTLDLSVNNFSGSVPASIGDLEHLLTLNLSRNHLN 434 (943)
Q Consensus 355 ~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 434 (943)
++++|+++ .+|.....+..|++|.+++|.+. ..+..+..+.++..|.+++|++. ..+..++.+++|+.|++++|+++
T Consensus 192 ~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~-~~~~~~~~l~~l~~L~~s~n~i~ 268 (394)
T COG4886 192 DLSGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLE-DLPESIGNLSNLETLDLSNNQIS 268 (394)
T ss_pred eccCCccc-cCchhhhhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCceee-eccchhccccccceecccccccc
Confidence 66666665 34443334444666666666433 34555666666666666666665 33556666666777777777776
Q ss_pred ccCCccccCCCccceecccCccccccCCh
Q 002278 435 GLLPAEFGNLRSIQTIDMSFNQLSGSIPA 463 (943)
Q Consensus 435 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 463 (943)
...+ ++.+.+|+.|++++|.+....|.
T Consensus 269 ~i~~--~~~~~~l~~L~~s~n~~~~~~~~ 295 (394)
T COG4886 269 SISS--LGSLTNLRELDLSGNSLSNALPL 295 (394)
T ss_pred cccc--ccccCccCEEeccCccccccchh
Confidence 4322 66667777777777776644443
No 461
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.40 E-value=3.8e-13 Score=152.75 Aligned_cols=201 Identities=36% Similarity=0.555 Sum_probs=154.6
Q ss_pred eEEecCCCCCCCCCCCcCCCCcCcEEEcccCccccccccccCCcc-cceEEEccccccCCcCcccccCCCcCcEEEeeCC
Q 002278 281 KLYLHGNKLTGPIPPELGNMSKLSYLQLQNNQLVGTIPAELGKLE-QLFELNLADNNLEGPIPHNISSCTALNQFNVHGN 359 (943)
Q Consensus 281 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 359 (943)
.+.+..|.+.. ....+..++.++.|++.+|.++ .++.....+. +|+.|++++|++. .+|..+..+++|+.|++++|
T Consensus 97 ~l~~~~~~~~~-~~~~~~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N 173 (394)
T COG4886 97 SLDLNLNRLRS-NISELLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFN 173 (394)
T ss_pred eeecccccccc-CchhhhcccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCc
Confidence 56667776642 2334555678888999999888 5666666674 8889999999887 55567888888999999999
Q ss_pred cccCcccccccccCccceeeccCCcCCCCCCCCCCCCCCccEEecCCCcCCCccCCCcccccccceeecccccccccCCc
Q 002278 360 RLSGAIPSSFRNLGSLTYLNLSRNNFKGKVPTELGRIINLDTLDLSVNNFSGSVPASIGDLEHLLTLNLSRNHLNGLLPA 439 (943)
Q Consensus 360 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~ 439 (943)
+++ .+|.....+++|+.|++++|++. .+|.....+..|++|++++|.+. ..+..+.++.++..|.+++|++.. .+.
T Consensus 174 ~l~-~l~~~~~~~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~~-~~~ 249 (394)
T COG4886 174 DLS-DLPKLLSNLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLED-LPE 249 (394)
T ss_pred hhh-hhhhhhhhhhhhhheeccCCccc-cCchhhhhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCceeee-ccc
Confidence 988 45555557888888999999888 66766666667888899988654 467778888888888888888873 477
Q ss_pred cccCCCccceecccCccccccCChhhhcccccceecccCcccCCCCCCcCc
Q 002278 440 EFGNLRSIQTIDMSFNQLSGSIPAELGQLQNIISLILNNNNLQGGIPDQLS 490 (943)
Q Consensus 440 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 490 (943)
.++++++|++|++++|+++ .++. ++.+.+|+.|++++|.+...+|....
T Consensus 250 ~~~~l~~l~~L~~s~n~i~-~i~~-~~~~~~l~~L~~s~n~~~~~~~~~~~ 298 (394)
T COG4886 250 SIGNLSNLETLDLSNNQIS-SISS-LGSLTNLRELDLSGNSLSNALPLIAL 298 (394)
T ss_pred hhccccccceecccccccc-cccc-ccccCccCEEeccCccccccchhhhc
Confidence 7888888999999999888 4555 88888899999999988866665443
No 462
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.38 E-value=3.7e-13 Score=136.18 Aligned_cols=206 Identities=21% Similarity=0.310 Sum_probs=143.9
Q ss_pred HHHHhcCCCCCcceeeeEEecCC-----cceEEEEEccCCChhhhccCCCC-CccCCHHHHHHHHHHHHHHHHHhhhCCC
Q 002278 663 LETIGSIRHRNIVSLHGYALSPY-----GNLLFYDYMVNGSLWDLLHGPSK-KVKLDWETRLKIAVGAAQGLAYLHHDCN 736 (943)
Q Consensus 663 ~~~l~~l~h~niv~l~~~~~~~~-----~~~lv~e~~~~g~L~~~l~~~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~ 736 (943)
..-+-++.|.|||+++.|+.+.. ...++.||+..|++..+|++.+. ...+......+++.||..||.|||+ |+
T Consensus 118 FdnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs-~~ 196 (458)
T KOG1266|consen 118 FDNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHS-CD 196 (458)
T ss_pred HHHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhc-cC
Confidence 34455567999999999986543 45788999999999999975432 3457788888999999999999999 59
Q ss_pred CCeEecCCCCccEEECCCCceeeccccccccc---CCCCCceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHH
Q 002278 737 PRIIHRDVKSSNILIDENFDAHLSDFGIARCI---PTAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEIL 813 (943)
Q Consensus 737 ~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~---~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ell 813 (943)
|.|+|+++..+-|++..+|-+|+.--.-.... ..........-.|-++|.|||.-.....+.++|||+||+...||.
T Consensus 197 PpiihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlema 276 (458)
T KOG1266|consen 197 PPIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMA 276 (458)
T ss_pred CccccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHH
Confidence 99999999999999999998887532111111 001111122234678999999988888889999999999999998
Q ss_pred hCCCCC-CCCccHHHHHHHhccccccccccCcccccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 002278 814 TGKKAV-DNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLV 885 (943)
Q Consensus 814 tG~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~ 885 (943)
.|..-- .+......-..+. ...-...... -..++..|+...|..||+|.+++.|.-
T Consensus 277 ilEiq~tnseS~~~~ee~ia----~~i~~len~l------------qr~~i~kcl~~eP~~rp~ar~llfHpl 333 (458)
T KOG1266|consen 277 ILEIQSTNSESKVEVEENIA----NVIIGLENGL------------QRGSITKCLEGEPNGRPDARLLLFHPL 333 (458)
T ss_pred HheeccCCCcceeehhhhhh----hheeeccCcc------------ccCcCcccccCCCCCCcchhhhhcCce
Confidence 876432 2222111000000 0000000001 124688899999999999999987653
No 463
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.37 E-value=1.5e-12 Score=147.32 Aligned_cols=141 Identities=18% Similarity=0.191 Sum_probs=99.4
Q ss_pred ceEEeeeceEEEEEEEecCCceEEEEEecccCcccH----------------------------------------HHHH
Q 002278 621 KYIVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNL----------------------------------------REFE 660 (943)
Q Consensus 621 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~----------------------------------------~~~~ 660 (943)
.+.||.|++|.||+|+.++|+.||||+......+.. -++.
T Consensus 122 ~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~ 201 (437)
T TIGR01982 122 EKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLR 201 (437)
T ss_pred CcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHH
Confidence 357999999999999999999999999754311100 0234
Q ss_pred HHHHHHhcC----CCCCcceeeeEE-ecCCcceEEEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHH-HHHHhhhC
Q 002278 661 TELETIGSI----RHRNIVSLHGYA-LSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQ-GLAYLHHD 734 (943)
Q Consensus 661 ~E~~~l~~l----~h~niv~l~~~~-~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~-~l~~LH~~ 734 (943)
+|++.+.++ +|..-+.+-.++ ......++||||++|+++.++.... .... ...+++..++. .+..+|..
T Consensus 202 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~--~~~~---~~~~ia~~~~~~~l~ql~~~ 276 (437)
T TIGR01982 202 REAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALD--EAGL---DRKALAENLARSFLNQVLRD 276 (437)
T ss_pred HHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHH--hcCC---CHHHHHHHHHHHHHHHHHhC
Confidence 455555544 233333333333 2345679999999999998876421 1112 23456666665 47788988
Q ss_pred CCCCeEecCCCCccEEECCCCceeecccccccccC
Q 002278 735 CNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIP 769 (943)
Q Consensus 735 ~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~ 769 (943)
|++|+|++|.||++++++.++++|||++..+.
T Consensus 277 ---g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 277 ---GFFHADLHPGNIFVLKDGKIIALDFGIVGRLS 308 (437)
T ss_pred ---CceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence 99999999999999999999999999997664
No 464
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.29 E-value=3.9e-12 Score=140.99 Aligned_cols=247 Identities=21% Similarity=0.178 Sum_probs=179.2
Q ss_pred hccccceEEee--eceEEEEEEEe--c-CCceEEEEEecccC--cccHHHHHHHHHHHhcCC-CCCcceeeeEEecCCcc
Q 002278 616 ENLSEKYIVGY--GASSTVYKCAL--K-NSRPIAVKKLYNQY--PHNLREFETELETIGSIR-HRNIVSLHGYALSPYGN 687 (943)
Q Consensus 616 ~~~~~~~~lG~--G~~g~Vy~~~~--~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~ 687 (943)
..|.....+|. |.+|.||.+.. + ++..+|+|+-+... +.....-.+|+.....++ |++.++.+..+...+..
T Consensus 114 ~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~l 193 (524)
T KOG0601|consen 114 QRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGIL 193 (524)
T ss_pred hhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcc
Confidence 34556677899 99999999986 3 57889999854332 233334456676666665 99999999999999999
Q ss_pred eEEEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHH----HHHHhhhCCCCCeEecCCCCccEEECCC-Cceeeccc
Q 002278 688 LLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQ----GLAYLHHDCNPRIIHRDVKSSNILIDEN-FDAHLSDF 762 (943)
Q Consensus 688 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~----~l~~LH~~~~~~ivH~Dlkp~Nill~~~-~~~kl~DF 762 (943)
++-.|++ +.++..+.+.. ...++....+.+..+..+ |+.++|+. +++|-|+||.||+...+ ...+++||
T Consensus 194 fiqtE~~-~~sl~~~~~~~--~~~~p~~~l~~~~~~~~~~~~~al~~~hs~---~~~~~~~kp~~i~~~~~~~s~~~~df 267 (524)
T KOG0601|consen 194 FIQTELC-GESLQSYCHTP--CNFLPDNLLWNSLRDWLSRDVTALSHLHSN---NIVHDDLKPANIFTTSDWTSCKLTDF 267 (524)
T ss_pred eeeeccc-cchhHHhhhcc--cccCCchhhhhHHhhhhhcccccccccCCC---cccccccchhheecccccceeecCCc
Confidence 9989987 57888877642 233677778888888888 99999999 99999999999999999 88999999
Q ss_pred ccccccCCCCCceee----eEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCC--ccHHHHHHHhcccc
Q 002278 763 GIARCIPTAMPHAST----FVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNE--SNLHQLIMSKADDN 836 (943)
Q Consensus 763 Gla~~~~~~~~~~~~----~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~--~~~~~~~~~~~~~~ 836 (943)
|+...+....-.... ...|...|++||...+ .++..+|+|++|.+..+..+|..+.... ..+.+ .....
T Consensus 268 ~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~-l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~---~r~~~- 342 (524)
T KOG0601|consen 268 GLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNG-LATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQ---LRQGY- 342 (524)
T ss_pred ceeEEccCCccccceeeeecCCCCceEeChhhhcc-ccchHhhhcchhhhhHhhHhhcccccCCCCCCccc---ccccc-
Confidence 999887655322111 1247888999998774 5788999999999999999887666433 21111 10000
Q ss_pred ccccccCcccccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002278 837 TVMEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARV 883 (943)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~ 883 (943)
.+. ++- .....++...+..+++.+|-.|++++.+..+
T Consensus 343 -ip~----e~~-----~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l 379 (524)
T KOG0601|consen 343 -IPL----EFC-----EGGSSSLRSVTSQMLDEDPRLRLTAQILTAL 379 (524)
T ss_pred -Cch----hhh-----cCcchhhhhHHHHhcCcchhhhhHHHHHhcc
Confidence 111 110 0111344458888999999999999888764
No 465
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.29 E-value=7.2e-13 Score=132.10 Aligned_cols=138 Identities=25% Similarity=0.281 Sum_probs=105.0
Q ss_pred ccccccCccceeeccCCcCCCCCCCCCCCCCCccEEecCCCcCCCccCCCcccccccceeecccccccccCCccccCCCc
Q 002278 367 SSFRNLGSLTYLNLSRNNFKGKVPTELGRIINLDTLDLSVNNFSGSVPASIGDLEHLLTLNLSRNHLNGLLPAEFGNLRS 446 (943)
Q Consensus 367 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 446 (943)
..+.....|++||||+|.|+ .+.+...-++.++.|++|+|.|.. + ..+..+++|+.||||+|.++ .+..+-..|-+
T Consensus 278 ~~~dTWq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~-v-~nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLGN 353 (490)
T KOG1259|consen 278 VSADTWQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRT-V-QNLAELPQLQLLDLSGNLLA-ECVGWHLKLGN 353 (490)
T ss_pred EecchHhhhhhccccccchh-hhhhhhhhccceeEEeccccceee-e-hhhhhcccceEeecccchhH-hhhhhHhhhcC
Confidence 34444567888888888887 566777778888888888888873 2 33778888888888888887 44455556778
Q ss_pred cceecccCccccccCChhhhcccccceecccCcccCCCC-CCcCccccCCcccccCCccccccCC
Q 002278 447 IQTIDMSFNQLSGSIPAELGQLQNIISLILNNNNLQGGI-PDQLSNCFSLSNLNVSYNNLSGIIP 510 (943)
Q Consensus 447 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~ls~N~l~~~~~ 510 (943)
+++|.|++|.|. .-..++.|-+|..||+++|+|.... -..++++|.|+.+.|.+|+|++++.
T Consensus 354 IKtL~La~N~iE--~LSGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~vd 416 (490)
T KOG1259|consen 354 IKTLKLAQNKIE--TLSGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGSVD 416 (490)
T ss_pred EeeeehhhhhHh--hhhhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccccch
Confidence 888889988886 2346777888888999999887422 2347889999999999999988765
No 466
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.24 E-value=1.5e-12 Score=129.79 Aligned_cols=131 Identities=27% Similarity=0.358 Sum_probs=103.1
Q ss_pred CCcCcEEEeeCCcccCcccccccccCccceeeccCCcCCCCCCCCCCCCCCccEEecCCCcCCCccCCCcccccccceee
Q 002278 348 CTALNQFNVHGNRLSGAIPSSFRNLGSLTYLNLSRNNFKGKVPTELGRIINLDTLDLSVNNFSGSVPASIGDLEHLLTLN 427 (943)
Q Consensus 348 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 427 (943)
...|+++||++|.|+ .+.++..-+|.++.|++|+|.+... +.+..+++|+.||||+|.++ .+-..-.++-++++|.
T Consensus 283 Wq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~v--~nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIKtL~ 358 (490)
T KOG1259|consen 283 WQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRTV--QNLAELPQLQLLDLSGNLLA-ECVGWHLKLGNIKTLK 358 (490)
T ss_pred Hhhhhhccccccchh-hhhhhhhhccceeEEeccccceeee--hhhhhcccceEeecccchhH-hhhhhHhhhcCEeeee
Confidence 356777777777777 5566677778888888888888732 34788888999999999887 4555556788899999
Q ss_pred cccccccccCCccccCCCccceecccCccccccC-ChhhhcccccceecccCcccCCC
Q 002278 428 LSRNHLNGLLPAEFGNLRSIQTIDMSFNQLSGSI-PAELGQLQNIISLILNNNNLQGG 484 (943)
Q Consensus 428 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~ 484 (943)
|++|.|.+. ..++.|-+|..||+++|+|.... -..+++||-|+.|.|.+|+|.+.
T Consensus 359 La~N~iE~L--SGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~ 414 (490)
T KOG1259|consen 359 LAQNKIETL--SGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGS 414 (490)
T ss_pred hhhhhHhhh--hhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCcccc
Confidence 999998743 56778889999999999997422 35789999999999999999843
No 467
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.22 E-value=3.3e-11 Score=119.39 Aligned_cols=130 Identities=19% Similarity=0.134 Sum_probs=95.7
Q ss_pred ceEEeeeceEEEEEEEecCCceEEEEEecccCcccHHHHHHHHHHHhcCCCCCcc-eeeeEEecCCcceEEEEEccCCCh
Q 002278 621 KYIVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIV-SLHGYALSPYGNLLFYDYMVNGSL 699 (943)
Q Consensus 621 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv-~l~~~~~~~~~~~lv~e~~~~g~L 699 (943)
.+.++.|.++.||++... ++.|++|....... ....+.+|+++++.+.+.+++ +++.+. ....++||||++|.++
T Consensus 3 ~~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~--~~~~~lv~e~i~G~~l 78 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFD--PETGVLITEFIEGSEL 78 (170)
T ss_pred eeecCCcccCceEEEEEC-CeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEe--CCCCeEEEEecCCCcc
Confidence 356899999999999876 77899998754321 234567899999988665544 444443 3346899999999877
Q ss_pred hhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCC--CCCeEecCCCCccEEECCCCceeeccccccc
Q 002278 700 WDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDC--NPRIIHRDVKSSNILIDENFDAHLSDFGIAR 766 (943)
Q Consensus 700 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~--~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~ 766 (943)
.+.- .....++.+++++++.||+.. ..+++|||++|.||+++ ++.++++|||.+.
T Consensus 79 ~~~~-----------~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~ 135 (170)
T cd05151 79 LTED-----------FSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAG 135 (170)
T ss_pred cccc-----------ccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEeccccc
Confidence 5430 111345678999999999872 12359999999999999 6689999999875
No 468
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=99.20 E-value=2.7e-12 Score=145.74 Aligned_cols=203 Identities=26% Similarity=0.315 Sum_probs=102.5
Q ss_pred ccccCCCcEEecCCCCCCCCCCcccCCCCCcceEEecCCCCCCCCCCCcCCCCcCcEEEcccCccccccccccCCcccce
Q 002278 249 IGLMQALAVLDLSENELVGPIPPILGNLSYTGKLYLHGNKLTGPIPPELGNMSKLSYLQLQNNQLVGTIPAELGKLEQLF 328 (943)
Q Consensus 249 l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 328 (943)
+..+.+|++|++++|.|+.+. .+..++.|+.|++.+|.|+.. ..+..+..|+.+++++|++..+.+.....+.+++
T Consensus 114 l~~~~~L~~L~ls~N~I~~i~--~l~~l~~L~~L~l~~N~i~~~--~~~~~l~~L~~l~l~~n~i~~ie~~~~~~~~~l~ 189 (414)
T KOG0531|consen 114 LSSLVNLQVLDLSFNKITKLE--GLSTLTLLKELNLSGNLISDI--SGLESLKSLKLLDLSYNRIVDIENDELSELISLE 189 (414)
T ss_pred hhhhhcchheecccccccccc--chhhccchhhheeccCcchhc--cCCccchhhhcccCCcchhhhhhhhhhhhccchH
Confidence 445666666666666666432 233444455566666665532 3344455666666666666533321024444455
Q ss_pred EEEccccccCCcCcccccCCCcCcEEEeeCCcccCcccccccccCccceeeccCCcCCCCCCCCCCCCCC--ccEEecCC
Q 002278 329 ELNLADNNLEGPIPHNISSCTALNQFNVHGNRLSGAIPSSFRNLGSLTYLNLSRNNFKGKVPTELGRIIN--LDTLDLSV 406 (943)
Q Consensus 329 ~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~--L~~L~Ls~ 406 (943)
.+.+.+|.+.. ...+..+. .+..+++..|.++..- .+..+.. |+.+++++
T Consensus 190 ~l~l~~n~i~~--i~~~~~~~------------------------~l~~~~l~~n~i~~~~--~l~~~~~~~L~~l~l~~ 241 (414)
T KOG0531|consen 190 ELDLGGNSIRE--IEGLDLLK------------------------KLVLLSLLDNKISKLE--GLNELVMLHLRELYLSG 241 (414)
T ss_pred HHhccCCchhc--ccchHHHH------------------------HHHHhhcccccceecc--CcccchhHHHHHHhccc
Confidence 55555555431 12222333 3333344444444221 1122222 55666666
Q ss_pred CcCCCccCCCcccccccceeecccccccccCCccccCCCccceecccCccccc---cCChh-hhcccccceecccCcccC
Q 002278 407 NNFSGSVPASIGDLEHLLTLNLSRNHLNGLLPAEFGNLRSIQTIDMSFNQLSG---SIPAE-LGQLQNIISLILNNNNLQ 482 (943)
Q Consensus 407 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~---~~p~~-~~~l~~L~~L~L~~N~l~ 482 (943)
|.+. ..+..+..+.++..|++++|++... ..+.....+..+.++.|.+.. ..... ....+.++.+.+.+|.+.
T Consensus 242 n~i~-~~~~~~~~~~~l~~l~~~~n~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (414)
T KOG0531|consen 242 NRIS-RSPEGLENLKNLPVLDLSSNRISNL--EGLERLPKLSELWLNDNKLALSEAISQEYITSAAPTLVTLTLELNPIR 318 (414)
T ss_pred Cccc-cccccccccccccccchhhcccccc--ccccccchHHHhccCcchhcchhhhhccccccccccccccccccCccc
Confidence 6655 2334555566666666666666533 334445566666666666552 11111 455666777777777776
Q ss_pred CCCC
Q 002278 483 GGIP 486 (943)
Q Consensus 483 ~~~p 486 (943)
...+
T Consensus 319 ~~~~ 322 (414)
T KOG0531|consen 319 KISS 322 (414)
T ss_pred cccc
Confidence 5444
No 469
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.18 E-value=4.9e-11 Score=136.24 Aligned_cols=143 Identities=14% Similarity=0.136 Sum_probs=94.6
Q ss_pred ccccceEEeeeceEEEEEEEecC-CceEEEEEecccCcc----------------------------------cHH----
Q 002278 617 NLSEKYIVGYGASSTVYKCALKN-SRPIAVKKLYNQYPH----------------------------------NLR---- 657 (943)
Q Consensus 617 ~~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~----------------------------------~~~---- 657 (943)
.|+. +.||+|++|.||+|++++ |+.||||+....... ..+
T Consensus 121 ~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~ 199 (537)
T PRK04750 121 DFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHD 199 (537)
T ss_pred hcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHH
Confidence 4555 689999999999999987 999999998643110 011
Q ss_pred --HHHHHHHHHhcC----CCCCcceeeeEEec-CCcceEEEEEccCCChhhhc--cCCC-CCccCCHHHHHHHHHHHHHH
Q 002278 658 --EFETELETIGSI----RHRNIVSLHGYALS-PYGNLLFYDYMVNGSLWDLL--HGPS-KKVKLDWETRLKIAVGAAQG 727 (943)
Q Consensus 658 --~~~~E~~~l~~l----~h~niv~l~~~~~~-~~~~~lv~e~~~~g~L~~~l--~~~~-~~~~l~~~~~~~i~~~i~~~ 727 (943)
++.+|+..+.++ .+...+.+-.++.+ ....++||||+.|+.+.++- .... ....+....+..++.|+
T Consensus 200 ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qi--- 276 (537)
T PRK04750 200 ELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQV--- 276 (537)
T ss_pred hhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHH---
Confidence 133444444444 24444444444433 45678999999999998742 2110 01123333333344444
Q ss_pred HHHhhhCCCCCeEecCCCCccEEECCCC----ceeecccccccccCC
Q 002278 728 LAYLHHDCNPRIIHRDVKSSNILIDENF----DAHLSDFGIARCIPT 770 (943)
Q Consensus 728 l~~LH~~~~~~ivH~Dlkp~Nill~~~~----~~kl~DFGla~~~~~ 770 (943)
... |++|+|+||.||+++.++ +++++|||++..+..
T Consensus 277 ----f~~---GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~ 316 (537)
T PRK04750 277 ----FRD---GFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK 316 (537)
T ss_pred ----HhC---CeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence 345 999999999999999888 999999999987644
No 470
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=99.17 E-value=3.7e-12 Score=144.69 Aligned_cols=216 Identities=28% Similarity=0.337 Sum_probs=117.2
Q ss_pred CCcceEEecCCCCCCCCCCCcCCCCcCcEEEcccCccccccccccCCcccceEEEccccccCCcCcccccCCCcCcEEEe
Q 002278 277 SYTGKLYLHGNKLTGPIPPELGNMSKLSYLQLQNNQLVGTIPAELGKLEQLFELNLADNNLEGPIPHNISSCTALNQFNV 356 (943)
Q Consensus 277 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 356 (943)
..++.+.+..|.+.. +-..+..+++|..|++.+|+|.. +...+..+++|++|+|++|.|+.+. .+..++.|+.|++
T Consensus 72 ~~l~~l~l~~n~i~~-~~~~l~~~~~l~~l~l~~n~i~~-i~~~l~~~~~L~~L~ls~N~I~~i~--~l~~l~~L~~L~l 147 (414)
T KOG0531|consen 72 TSLKELNLRQNLIAK-ILNHLSKLKSLEALDLYDNKIEK-IENLLSSLVNLQVLDLSFNKITKLE--GLSTLTLLKELNL 147 (414)
T ss_pred HhHHhhccchhhhhh-hhcccccccceeeeeccccchhh-cccchhhhhcchheecccccccccc--chhhccchhhhee
Confidence 334444444454442 22234455555566666665552 2222455556666666666665432 2444455666666
Q ss_pred eCCcccCcccccccccCccceeeccCCcCCCCCC-CCCCCCCCccEEecCCCcCCCccCCCcccccccceeecccccccc
Q 002278 357 HGNRLSGAIPSSFRNLGSLTYLNLSRNNFKGKVP-TELGRIINLDTLDLSVNNFSGSVPASIGDLEHLLTLNLSRNHLNG 435 (943)
Q Consensus 357 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 435 (943)
++|.|+.+ ..+..+.+|+.+++++|++....+ . ...+.+++.+++++|.+. ....+..+..+..+++..|+++.
T Consensus 148 ~~N~i~~~--~~~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~--~i~~~~~~~~l~~~~l~~n~i~~ 222 (414)
T KOG0531|consen 148 SGNLISDI--SGLESLKSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSIR--EIEGLDLLKKLVLLSLLDNKISK 222 (414)
T ss_pred ccCcchhc--cCCccchhhhcccCCcchhhhhhhhh-hhhccchHHHhccCCchh--cccchHHHHHHHHhhccccccee
Confidence 66666522 234446666666666666663332 1 355666666777777665 23334445555555667777663
Q ss_pred cCCccccCCCc--cceecccCccccccCChhhhcccccceecccCcccCCCCCCcCccccCCcccccCCcccc
Q 002278 436 LLPAEFGNLRS--IQTIDMSFNQLSGSIPAELGQLQNIISLILNNNNLQGGIPDQLSNCFSLSNLNVSYNNLS 506 (943)
Q Consensus 436 ~~p~~~~~l~~--L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~ 506 (943)
.- .+..+.. |+.+++++|++. .++..+..+..+..|++.+|++...- .+.....+..+....|.+.
T Consensus 223 ~~--~l~~~~~~~L~~l~l~~n~i~-~~~~~~~~~~~l~~l~~~~n~~~~~~--~~~~~~~~~~~~~~~~~~~ 290 (414)
T KOG0531|consen 223 LE--GLNELVMLHLRELYLSGNRIS-RSPEGLENLKNLPVLDLSSNRISNLE--GLERLPKLSELWLNDNKLA 290 (414)
T ss_pred cc--CcccchhHHHHHHhcccCccc-cccccccccccccccchhhccccccc--cccccchHHHhccCcchhc
Confidence 32 1222233 677777777776 44455666667777777777765321 2334455666666666665
No 471
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.17 E-value=2.5e-11 Score=134.62 Aligned_cols=250 Identities=18% Similarity=0.165 Sum_probs=181.3
Q ss_pred HHHHhhccccceEEeeeceEEEEEEEec--CCceEEEEEecccCcccHHHH--HHHHHHHhcCC-CCCcceeeeEEecCC
Q 002278 611 IMRSTENLSEKYIVGYGASSTVYKCALK--NSRPIAVKKLYNQYPHNLREF--ETELETIGSIR-HRNIVSLHGYALSPY 685 (943)
Q Consensus 611 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~~--~~~~vavK~~~~~~~~~~~~~--~~E~~~l~~l~-h~niv~l~~~~~~~~ 685 (943)
......+|..+..||.|.|+.||....+ ++..|++|.+.+.......+. ..|+.+...+. |.++++.+..+...+
T Consensus 260 ~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r 339 (524)
T KOG0601|consen 260 TSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLR 339 (524)
T ss_pred ceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccc
Confidence 3445678888999999999999998744 578899998876554433332 35666666664 899999888888888
Q ss_pred cceEEEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCC-Cceeeccccc
Q 002278 686 GNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDEN-FDAHLSDFGI 764 (943)
Q Consensus 686 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~-~~~kl~DFGl 764 (943)
..|+--||+.++++..... -...+++..++++..|++.++.++|+. .++|+|+||+||++..+ +..+++|||.
T Consensus 340 ~~~ip~e~~~~~s~~l~~~---~~~~~d~~~~~~~~~q~~~~l~~i~s~---~~~~~d~~psni~i~~~~~~~~~~~~~~ 413 (524)
T KOG0601|consen 340 QGYIPLEFCEGGSSSLRSV---TSQMLDEDPRLRLTAQILTALNVIHSK---LFVHLDVKPSNILISNDGFFSKLGDFGC 413 (524)
T ss_pred cccCchhhhcCcchhhhhH---HHHhcCcchhhhhHHHHHhccccccch---hhhcccccccceeeccchhhhhcccccc
Confidence 8889999999998877652 345688888999999999999999998 99999999999999875 8899999999
Q ss_pred ccccCCCCCceeeeEeccccee--CccccccCCCCCcchhhhHHHHHHHHHhCCCCCCCCccHHHHHHHhcccccccccc
Q 002278 765 ARCIPTAMPHASTFVLGTIGYI--DPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAVDNESNLHQLIMSKADDNTVMEAV 842 (943)
Q Consensus 765 a~~~~~~~~~~~~~~~gt~~y~--aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 842 (943)
++.+.-. .....+.-+++ +|+......+..++|++|||..+.|..+|..--...... ..+. ...
T Consensus 414 ~t~~~~~----~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~~---~~i~-------~~~ 479 (524)
T KOG0601|consen 414 WTRLAFS----SGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGVQS---LTIR-------SGD 479 (524)
T ss_pred cccccee----cccccccccccccchhhccccccccccccccccccccccccCcccCcccccc---eeee-------ccc
Confidence 8753211 11112233444 566666778899999999999999999986544332221 1111 111
Q ss_pred CcccccCccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhh
Q 002278 843 DPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQEVARVLVS 886 (943)
Q Consensus 843 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~el~~~L~~ 886 (943)
-+... . ....+..+.+.+..+++..||.+.++..+.+.
T Consensus 480 ~p~~~----~--~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~ 517 (524)
T KOG0601|consen 480 TPNLP----G--LKLQLQVLLKVMINPDRKRRPSAVELSLHSEF 517 (524)
T ss_pred ccCCC----c--hHHhhhhhhhhhcCCccccchhhhhhcccchh
Confidence 11111 1 11345567788889999999999888776543
No 472
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.16 E-value=1.3e-12 Score=133.93 Aligned_cols=234 Identities=22% Similarity=0.315 Sum_probs=144.6
Q ss_pred CCcEEEEEcCCCCCccc----cCCCcCCCCCCCEEEeeCC---cccccCCC-------CccCCCCCcEEeccCCCcCCcc
Q 002278 37 SLSVVSLNLSSLNLGGE----ISPSIGDLRNLQSIDFQGN---KLTGQIPD-------EIGNCGSLVHIELSDNSLYGDI 102 (943)
Q Consensus 37 ~~~v~~L~l~~~~~~~~----~~~~l~~l~~L~~L~Ls~n---~l~~~~p~-------~~~~l~~L~~L~Ls~N~l~~~~ 102 (943)
...++.++||+|.+... +.+.|...++|+..++|+- ++...+|. .+...++|++||||+|-+.-..
T Consensus 29 ~~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA~G~~g 108 (382)
T KOG1909|consen 29 MDSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDMFTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDNAFGPKG 108 (382)
T ss_pred cCceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhhhcCCcHHHHHHHHHHHHHHHhcCCceeEeeccccccCccc
Confidence 34688999999998864 5567888889999999973 23334444 3445679999999999987555
Q ss_pred chh----ccccccceEEEecCcccccCCCc-------------ccCCCCCCcEEEEeccccccc----cchhccccccce
Q 002278 103 PFS----ISKLKQLEFLNLKNNQLTGPIPS-------------TLTQIPNLKTLDLARNQLTGE----IPRLIYWNEVLQ 161 (943)
Q Consensus 103 p~~----~~~l~~L~~L~Ls~n~l~~~~~~-------------~~~~l~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~ 161 (943)
+.. ++.+..|++|+|.+|.+.-.... -...-++|++++..+|++... +...|...+.|+
T Consensus 109 ~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~al~~l~~~kk~~~~~~Lrv~i~~rNrlen~ga~~~A~~~~~~~~le 188 (382)
T KOG1909|consen 109 IRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGRALFELAVNKKAASKPKLRVFICGRNRLENGGATALAEAFQSHPTLE 188 (382)
T ss_pred hHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHHHHHHHHHHhccCCCcceEEEEeeccccccccHHHHHHHHHhccccc
Confidence 544 45678999999999988732222 233457889999999988732 344555666777
Q ss_pred eccccCCccCCC----CCcccccccccceeeccceeccc----ccCCCCcCCCcccEEEeecccccCcCCCCCCcceEeE
Q 002278 162 YLGLRGNALTGM----LSPDMCQLTGLWYFDVRGNNLTG----TIPDSIGNCTSFEILDISYNQITGEIPYNIGFLQVAT 233 (943)
Q Consensus 162 ~L~L~~n~l~~~----~~~~~~~l~~L~~L~L~~N~i~~----~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~L~~ 233 (943)
.+.++.|.|..- ....|..+++|++|||+.|-++. .+...++.+++|++|++++|.+...-...
T Consensus 189 evr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~l~dcll~~~Ga~a-------- 260 (382)
T KOG1909|consen 189 EVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELNLGDCLLENEGAIA-------- 260 (382)
T ss_pred eEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccchheeecccccccccccHHH--------
Confidence 777777776522 12234555666666666665542 12234444555555555555554221111
Q ss_pred EEecCccccccCCccc-cccCCCcEEecCCCCCCC----CCCcccCCCCCcceEEecCCCC
Q 002278 234 LSLQGNKLTGKIPEVI-GLMQALAVLDLSENELVG----PIPPILGNLSYTGKLYLHGNKL 289 (943)
Q Consensus 234 L~L~~n~l~~~~~~~l-~~l~~L~~L~Ls~N~l~~----~~~~~~~~l~~L~~L~L~~n~l 289 (943)
+.+.+ ...++|++|.|.+|.|+. .+.......+.|..|+|++|.+
T Consensus 261 -----------~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l 310 (382)
T KOG1909|consen 261 -----------FVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRL 310 (382)
T ss_pred -----------HHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCcccc
Confidence 11111 124566677777776653 1222344466677777777776
No 473
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.16 E-value=1.9e-10 Score=128.50 Aligned_cols=165 Identities=17% Similarity=0.218 Sum_probs=125.5
Q ss_pred cCCceEEEEEecccCcccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEEccCCChhhhccCCCCCccCCHHHH
Q 002278 638 KNSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETR 717 (943)
Q Consensus 638 ~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~ 717 (943)
.++.+|.|...............+.++.++.+|||+|+++++.+..++..|+|+|.+. .|..++.. +....+
T Consensus 35 ~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~------l~~~~v 106 (690)
T KOG1243|consen 35 ADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKE------LGKEEV 106 (690)
T ss_pred ccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHH------hHHHHH
Confidence 3578888888776655445567788889999999999999999999999999999874 45556642 335667
Q ss_pred HHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCCceeeeEecccceeCccccccCCCC
Q 002278 718 LKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHASTFVLGTIGYIDPEYAHTSRLN 797 (943)
Q Consensus 718 ~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~ 797 (943)
...+.||+.||.|||..| +++|++|.-.-|++++.|+.||++|-++......... .....--..|..|+.+....
T Consensus 107 ~~Gl~qIl~AL~FL~~d~--~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~~-~~~~~~~~s~~~P~~~~~s~-- 181 (690)
T KOG1243|consen 107 CLGLFQILAALSFLNDDC--NLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNAP-AKSLYLIESFDDPEEIDPSE-- 181 (690)
T ss_pred HHHHHHHHHHHHHHhccC--CeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCcc-cccchhhhcccChhhcCccc--
Confidence 778899999999999765 9999999999999999999999999888654332210 11111122455666544322
Q ss_pred CcchhhhHHHHHHHHHhC
Q 002278 798 EKSDVYSFGIVLLEILTG 815 (943)
Q Consensus 798 ~~~DvwSlGvil~elltG 815 (943)
...|.|.|||+++|++.|
T Consensus 182 ~s~D~~~Lg~li~el~ng 199 (690)
T KOG1243|consen 182 WSIDSWGLGCLIEELFNG 199 (690)
T ss_pred cchhhhhHHHHHHHHhCc
Confidence 356999999999999998
No 474
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.15 E-value=1.8e-11 Score=118.74 Aligned_cols=123 Identities=28% Similarity=0.340 Sum_probs=34.2
Q ss_pred CCCCcEEeccCCCcCCccchhcc-ccccceEEEecCcccccCCCcccCCCCCCcEEEEeccccccccchhc-ccccccee
Q 002278 85 CGSLVHIELSDNSLYGDIPFSIS-KLKQLEFLNLKNNQLTGPIPSTLTQIPNLKTLDLARNQLTGEIPRLI-YWNEVLQY 162 (943)
Q Consensus 85 l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~-~~l~~L~~ 162 (943)
..++++|+|++|+|+. + +.++ .+.+|+.|+|++|.|+.. +.+..+++|++|+|++|+|+.. ...+ ..+++|++
T Consensus 18 ~~~~~~L~L~~n~I~~-I-e~L~~~l~~L~~L~Ls~N~I~~l--~~l~~L~~L~~L~L~~N~I~~i-~~~l~~~lp~L~~ 92 (175)
T PF14580_consen 18 PVKLRELNLRGNQIST-I-ENLGATLDKLEVLDLSNNQITKL--EGLPGLPRLKTLDLSNNRISSI-SEGLDKNLPNLQE 92 (175)
T ss_dssp --------------------S--TT-TT--EEE-TTS--S----TT----TT--EEE--SS---S--CHHHHHH-TT--E
T ss_pred cccccccccccccccc-c-cchhhhhcCCCEEECCCCCCccc--cCccChhhhhhcccCCCCCCcc-ccchHHhCCcCCE
Confidence 3344445555554442 1 1232 344555555555555422 2344455555555555555522 2222 23455555
Q ss_pred ccccCCccCCCCC-cccccccccceeeccceecccccC---CCCcCCCcccEEE
Q 002278 163 LGLRGNALTGMLS-PDMCQLTGLWYFDVRGNNLTGTIP---DSIGNCTSFEILD 212 (943)
Q Consensus 163 L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~N~i~~~~~---~~l~~l~~L~~L~ 212 (943)
|+|++|+|..+.. ..+..+++|++|+|.+|.++...- ..+..+++|+.||
T Consensus 93 L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~~~~YR~~vi~~lP~Lk~LD 146 (175)
T PF14580_consen 93 LYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVCEKKNYRLFVIYKLPSLKVLD 146 (175)
T ss_dssp EE-TTS---SCCCCGGGGG-TT--EEE-TT-GGGGSTTHHHHHHHH-TT-SEET
T ss_pred EECcCCcCCChHHhHHHHcCCCcceeeccCCcccchhhHHHHHHHHcChhheeC
Confidence 5555555544321 345556677777777777663211 1345677777777
No 475
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.15 E-value=4.8e-10 Score=111.03 Aligned_cols=136 Identities=13% Similarity=0.111 Sum_probs=98.0
Q ss_pred eEEeeeceEEEEEEEecC-------CceEEEEEecccC------------c----------ccHHHH----HHHHHHHhc
Q 002278 622 YIVGYGASSTVYKCALKN-------SRPIAVKKLYNQY------------P----------HNLREF----ETELETIGS 668 (943)
Q Consensus 622 ~~lG~G~~g~Vy~~~~~~-------~~~vavK~~~~~~------------~----------~~~~~~----~~E~~~l~~ 668 (943)
..||.|.-+.||.|...+ +..+|||..+... + .....+ ++|++.|++
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999998553 4789999764211 0 001222 379999998
Q ss_pred CCC--CCcceeeeEEecCCcceEEEEEccCCChhh-hccCCCCCccCCHHHHHHHHHHHHHHHHHh-hhCCCCCeEecCC
Q 002278 669 IRH--RNIVSLHGYALSPYGNLLFYDYMVNGSLWD-LLHGPSKKVKLDWETRLKIAVGAAQGLAYL-HHDCNPRIIHRDV 744 (943)
Q Consensus 669 l~h--~niv~l~~~~~~~~~~~lv~e~~~~g~L~~-~l~~~~~~~~l~~~~~~~i~~~i~~~l~~L-H~~~~~~ivH~Dl 744 (943)
+.. -++..++++ ...++||||+.++.+.. .++ ...++..+...+..+++.++..+ |.. ++|||||
T Consensus 83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lk----d~~~~~~~~~~i~~~i~~~l~~l~H~~---glVHGDL 151 (197)
T cd05146 83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLK----DAKLNDEEMKNAYYQVLSMMKQLYKEC---NLVHADL 151 (197)
T ss_pred HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhh----ccccCHHHHHHHHHHHHHHHHHHHHhC---CeecCCC
Confidence 864 355566554 56799999997654322 222 12345566777889999999999 777 9999999
Q ss_pred CCccEEECCCCceeecccccccccC
Q 002278 745 KSSNILIDENFDAHLSDFGIARCIP 769 (943)
Q Consensus 745 kp~Nill~~~~~~kl~DFGla~~~~ 769 (943)
++.||+++ ++.++++|||.|....
T Consensus 152 s~~NIL~~-~~~v~iIDF~qav~~~ 175 (197)
T cd05146 152 SEYNMLWH-DGKVWFIDVSQSVEPT 175 (197)
T ss_pred CHHHEEEE-CCcEEEEECCCceeCC
Confidence 99999997 4689999999887553
No 476
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.13 E-value=8e-12 Score=131.53 Aligned_cols=137 Identities=27% Similarity=0.247 Sum_probs=65.3
Q ss_pred cCCCCcCcEEEcccCccccccc--cccCCcccceEEEccccccCCcCcccc-cCCCcCcEEEeeCCcccCc-cccccccc
Q 002278 297 LGNMSKLSYLQLQNNQLVGTIP--AELGKLEQLFELNLADNNLEGPIPHNI-SSCTALNQFNVHGNRLSGA-IPSSFRNL 372 (943)
Q Consensus 297 ~~~l~~L~~L~L~~N~l~~~~~--~~~~~l~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~L~~N~l~~~-~~~~~~~l 372 (943)
...+++++.|||+.|-+....+ .....|++|+.|+|+.|++.-...... ..++.|+.|.|+.|.++-. +......+
T Consensus 142 ~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~~lK~L~l~~CGls~k~V~~~~~~f 221 (505)
T KOG3207|consen 142 SKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLSHLKQLVLNSCGLSWKDVQWILLTF 221 (505)
T ss_pred hhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhhhhheEEeccCCCCHHHHHHHHHhC
Confidence 3445566666666665542211 223456666666666666652221111 1344555666666655421 11223345
Q ss_pred CccceeeccCCcCCCCCCCCCCCCCCccEEecCCCcCCCccC--CCcccccccceeeccccccc
Q 002278 373 GSLTYLNLSRNNFKGKVPTELGRIINLDTLDLSVNNFSGSVP--ASIGDLEHLLTLNLSRNHLN 434 (943)
Q Consensus 373 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--~~~~~l~~L~~L~Ls~N~l~ 434 (943)
|+|+.|+|..|..-........-+..|+.|||++|++.. .+ ...+.++.|+.|+++.+.+.
T Consensus 222 Psl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~-~~~~~~~~~l~~L~~Lnls~tgi~ 284 (505)
T KOG3207|consen 222 PSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLID-FDQGYKVGTLPGLNQLNLSSTGIA 284 (505)
T ss_pred CcHHHhhhhcccccceecchhhhhhHHhhccccCCcccc-cccccccccccchhhhhccccCcc
Confidence 566666666663222333333344455555555555542 22 22344555555555555554
No 477
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.12 E-value=1.3e-11 Score=129.88 Aligned_cols=208 Identities=20% Similarity=0.158 Sum_probs=94.3
Q ss_pred CCCCCcEEeccCCCcCCccc--hhccccccceEEEecCcccccCC--CcccCCCCCCcEEEEeccccccccchhc-cccc
Q 002278 84 NCGSLVHIELSDNSLYGDIP--FSISKLKQLEFLNLKNNQLTGPI--PSTLTQIPNLKTLDLARNQLTGEIPRLI-YWNE 158 (943)
Q Consensus 84 ~l~~L~~L~Ls~N~l~~~~p--~~~~~l~~L~~L~Ls~n~l~~~~--~~~~~~l~~L~~L~Ls~N~l~~~~~~~~-~~l~ 158 (943)
++.+|+...|.+..+. ..+ .....|++++.||||+|-+.... ......||+|+.|+|+.|++........ ..++
T Consensus 119 n~kkL~~IsLdn~~V~-~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~ 197 (505)
T KOG3207|consen 119 NLKKLREISLDNYRVE-DAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLS 197 (505)
T ss_pred hHHhhhheeecCcccc-ccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhh
Confidence 3455555555555544 222 13344555555555555444221 1233445555555555555542111111 1234
Q ss_pred cceeccccCCccCCCC-CcccccccccceeeccceecccccCCCCcCCCcccEEEeecccccCcCCCCCCcceEeEEEec
Q 002278 159 VLQYLGLRGNALTGML-SPDMCQLTGLWYFDVRGNNLTGTIPDSIGNCTSFEILDISYNQITGEIPYNIGFLQVATLSLQ 237 (943)
Q Consensus 159 ~L~~L~L~~n~l~~~~-~~~~~~l~~L~~L~L~~N~i~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~L~~L~L~ 237 (943)
.|+.|.|+.|.++.-. ......+++|+.|+|..|.....-......+..|++|||++|++-... .
T Consensus 198 ~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~-~------------- 263 (505)
T KOG3207|consen 198 HLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFD-Q------------- 263 (505)
T ss_pred hhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccccc-c-------------
Confidence 4555555555554211 011233456666666666432233334445566666666666654211 0
Q ss_pred CccccccCCccccccCCCcEEecCCCCCCCC-CCcc-----cCCCCCcceEEecCCCCCCC-CCCCcCCCCcCcEEEccc
Q 002278 238 GNKLTGKIPEVIGLMQALAVLDLSENELVGP-IPPI-----LGNLSYTGKLYLHGNKLTGP-IPPELGNMSKLSYLQLQN 310 (943)
Q Consensus 238 ~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~-~~~~-----~~~l~~L~~L~L~~n~l~~~-~~~~~~~l~~L~~L~L~~ 310 (943)
-...+.++.|+.|+++.+.+..+ .|+. ...+++|+.|++..|+|... .-..+..+.+|+.|.+..
T Consensus 264 --------~~~~~~l~~L~~Lnls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~w~sl~~l~~l~nlk~l~~~~ 335 (505)
T KOG3207|consen 264 --------GYKVGTLPGLNQLNLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIRDWRSLNHLRTLENLKHLRITL 335 (505)
T ss_pred --------ccccccccchhhhhccccCcchhcCCCccchhhhcccccceeeecccCccccccccchhhccchhhhhhccc
Confidence 01122333444444444443321 1111 23345555555555555321 112344456677777777
Q ss_pred Cccc
Q 002278 311 NQLV 314 (943)
Q Consensus 311 N~l~ 314 (943)
|.+.
T Consensus 336 n~ln 339 (505)
T KOG3207|consen 336 NYLN 339 (505)
T ss_pred cccc
Confidence 7776
No 478
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.10 E-value=3.5e-11 Score=116.65 Aligned_cols=16 Identities=19% Similarity=0.106 Sum_probs=4.6
Q ss_pred cccCCcccccCCcccc
Q 002278 491 NCFSLSNLNVSYNNLS 506 (943)
Q Consensus 491 ~l~~L~~L~ls~N~l~ 506 (943)
.+++|+.|++.+|+++
T Consensus 111 ~l~~L~~L~L~~NPv~ 126 (175)
T PF14580_consen 111 SLPKLRVLSLEGNPVC 126 (175)
T ss_dssp G-TT--EEE-TT-GGG
T ss_pred cCCCcceeeccCCccc
Confidence 3444444444444443
No 479
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.10 E-value=6.7e-10 Score=105.39 Aligned_cols=130 Identities=22% Similarity=0.349 Sum_probs=100.6
Q ss_pred EEeeeceEEEEEEEecCCceEEEEEe-cccCc--c-----cHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEEEEc
Q 002278 623 IVGYGASSTVYKCALKNSRPIAVKKL-YNQYP--H-----NLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFYDYM 694 (943)
Q Consensus 623 ~lG~G~~g~Vy~~~~~~~~~vavK~~-~~~~~--~-----~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 694 (943)
.+++|+-+.+|.+.+. |.++++|.= .+... . ...+..+|++++.+++--.|....-+..+++...|+|||+
T Consensus 3 ~i~~GAEa~i~~~~~~-g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~I 81 (204)
T COG3642 3 LIKQGAEAIIYLTDFL-GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEYI 81 (204)
T ss_pred hhhCCcceeEEeeecc-CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEEe
Confidence 5789999999999775 444555533 22221 1 1234567999999988777766667778888889999999
Q ss_pred cCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccc
Q 002278 695 VNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARC 767 (943)
Q Consensus 695 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~ 767 (943)
+|..|.+.+... ...++..+-.-+.-||.. +|||+||.++||++..+. +.++|||++.+
T Consensus 82 ~G~~lkd~l~~~----------~~~~~r~vG~~vg~lH~~---givHGDLTtsNiIl~~~~-i~~IDfGLg~~ 140 (204)
T COG3642 82 EGELLKDALEEA----------RPDLLREVGRLVGKLHKA---GIVHGDLTTSNIILSGGR-IYFIDFGLGEF 140 (204)
T ss_pred CChhHHHHHHhc----------chHHHHHHHHHHHHHHhc---CeecCCCccceEEEeCCc-EEEEECCcccc
Confidence 999999888632 245667777778899999 999999999999998764 99999999874
No 480
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.07 E-value=5.6e-12 Score=129.37 Aligned_cols=98 Identities=24% Similarity=0.319 Sum_probs=47.7
Q ss_pred CcCCCCCCCEEEeeCCcccc----cCCCCccCCCCCcEEeccCC---CcCCccchhccccccceEEEecCcccccCCCcc
Q 002278 57 SIGDLRNLQSIDFQGNKLTG----QIPDEIGNCGSLVHIELSDN---SLYGDIPFSISKLKQLEFLNLKNNQLTGPIPST 129 (943)
Q Consensus 57 ~l~~l~~L~~L~Ls~n~l~~----~~p~~~~~l~~L~~L~Ls~N---~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~ 129 (943)
-+..+..+++|+||+|.|.. .+...+.+.++|+..++|+= ++...+|.++.- +...
T Consensus 25 ~~~~~~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~ftGR~~~Ei~e~L~~-----------------l~~a 87 (382)
T KOG1909|consen 25 ELEPMDSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDMFTGRLKDEIPEALKM-----------------LSKA 87 (382)
T ss_pred HhcccCceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhhhcCCcHHHHHHHHHH-----------------HHHH
Confidence 34455666666777666642 23334455556666666542 222333333211 1123
Q ss_pred cCCCCCCcEEEEeccccccccchh----ccccccceeccccCCccC
Q 002278 130 LTQIPNLKTLDLARNQLTGEIPRL----IYWNEVLQYLGLRGNALT 171 (943)
Q Consensus 130 ~~~l~~L~~L~Ls~N~l~~~~~~~----~~~l~~L~~L~L~~n~l~ 171 (943)
+...++|++||||.|-+....+.. +..+..|++|+|.+|.+.
T Consensus 88 L~~~~~L~~ldLSDNA~G~~g~~~l~~ll~s~~~L~eL~L~N~Glg 133 (382)
T KOG1909|consen 88 LLGCPKLQKLDLSDNAFGPKGIRGLEELLSSCTDLEELYLNNCGLG 133 (382)
T ss_pred HhcCCceeEeeccccccCccchHHHHHHHHhccCHHHHhhhcCCCC
Confidence 334455555555555554222222 233455666666666665
No 481
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.04 E-value=1.9e-09 Score=111.99 Aligned_cols=141 Identities=18% Similarity=0.195 Sum_probs=109.7
Q ss_pred eEEeeeceEEEEEEEecCCceEEEEEecccCc-ccHHHHHHHHHHHhcCCCC--CcceeeeEEecCC---cceEEEEEcc
Q 002278 622 YIVGYGASSTVYKCALKNSRPIAVKKLYNQYP-HNLREFETELETIGSIRHR--NIVSLHGYALSPY---GNLLFYDYMV 695 (943)
Q Consensus 622 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~--niv~l~~~~~~~~---~~~lv~e~~~ 695 (943)
+.+|.|.++.||++...+|+.+++|....... .....+.+|+++++.+++. .+.+++.+..... ..++||||++
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~ 83 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVD 83 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeC
Confidence 56899999999999887668899998754322 1346788999999999764 4566777766542 5689999999
Q ss_pred CCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCC----------------------------------------
Q 002278 696 NGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDC---------------------------------------- 735 (943)
Q Consensus 696 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~---------------------------------------- 735 (943)
|+++.+.+.. ..++..+...++.++++++++||+..
T Consensus 84 G~~l~~~~~~----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (223)
T cd05154 84 GRVLRDRLLR----PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMER 159 (223)
T ss_pred CEecCCCCCC----CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHH
Confidence 9888776531 34677788888889999999998531
Q ss_pred -------------CCCeEecCCCCccEEECC--CCceeeccccccc
Q 002278 736 -------------NPRIIHRDVKSSNILIDE--NFDAHLSDFGIAR 766 (943)
Q Consensus 736 -------------~~~ivH~Dlkp~Nill~~--~~~~kl~DFGla~ 766 (943)
...++|+|+.|.||+++. ++.+.++||+.+.
T Consensus 160 ~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~ 205 (223)
T cd05154 160 LLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELAT 205 (223)
T ss_pred HHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEeccccc
Confidence 246799999999999998 6678999999875
No 482
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=99.04 E-value=1.7e-10 Score=139.55 Aligned_cols=151 Identities=21% Similarity=0.270 Sum_probs=99.4
Q ss_pred CCCCCCEEEeeCCcccccCCCCccCCCCCcEEeccCCC--cCCccchhccccccceEEEecCcccccCCCcccCCCCCCc
Q 002278 60 DLRNLQSIDFQGNKLTGQIPDEIGNCGSLVHIELSDNS--LYGDIPFSISKLKQLEFLNLKNNQLTGPIPSTLTQIPNLK 137 (943)
Q Consensus 60 ~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~--l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~ 137 (943)
+....+++.+.+|++. .++....+ ++|+.|-+..|. +.......|..++.|+.|||++|.=.+.+|..++.|-+||
T Consensus 521 ~~~~~rr~s~~~~~~~-~~~~~~~~-~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~Lr 598 (889)
T KOG4658|consen 521 SWNSVRRMSLMNNKIE-HIAGSSEN-PKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLR 598 (889)
T ss_pred chhheeEEEEeccchh-hccCCCCC-CccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhh
Confidence 3356777777777776 45544433 367777777775 4423333466778888888887766567788888888888
Q ss_pred EEEEeccccccccchhccccccceeccccCCccCCCCCcccccccccceeeccceecc--cccCCCCcCCCcccEEEe
Q 002278 138 TLDLARNQLTGEIPRLIYWNEVLQYLGLRGNALTGMLSPDMCQLTGLWYFDVRGNNLT--GTIPDSIGNCTSFEILDI 213 (943)
Q Consensus 138 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~--~~~~~~l~~l~~L~~L~L 213 (943)
+|+|+...+. .+|..+..++.|.+|++..+.-....++....|.+|++|.+..-... ...-..+.++.+|+.|..
T Consensus 599 yL~L~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~~~~~~~~l~el~~Le~L~~ls~ 675 (889)
T KOG4658|consen 599 YLDLSDTGIS-HLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRSALSNDKLLLKELENLEHLENLSI 675 (889)
T ss_pred cccccCCCcc-ccchHHHHHHhhheeccccccccccccchhhhcccccEEEeeccccccchhhHHhhhcccchhhhee
Confidence 8888888777 67777788888888888777655555666667788888777665422 122233344555555554
No 483
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.03 E-value=2.3e-09 Score=100.92 Aligned_cols=142 Identities=20% Similarity=0.320 Sum_probs=105.0
Q ss_pred cceEEeeeceEEEEEEEecCCceEEEEEe-cccCcc-------cHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceEEE
Q 002278 620 EKYIVGYGASSTVYKCALKNSRPIAVKKL-YNQYPH-------NLREFETELETIGSIRHRNIVSLHGYALSPYGNLLFY 691 (943)
Q Consensus 620 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~-~~~~~~-------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 691 (943)
....+-||+-+.|+++.+. |+...||.- .+.... ..++..+|++.+.+++--.|.-..-++.+.....++|
T Consensus 11 ~l~likQGAEArv~~~~~~-Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~M 89 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSFS-GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYM 89 (229)
T ss_pred cceeeeccceeeEeeeccC-CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEE
Confidence 4567899999999999887 666666643 222211 2345678999999887666665556777777889999
Q ss_pred EEccC-CChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCC---ceeeccccccc
Q 002278 692 DYMVN-GSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENF---DAHLSDFGIAR 766 (943)
Q Consensus 692 e~~~~-g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~---~~kl~DFGla~ 766 (943)
||++| .++.+++....... ...+.....+..|-+.+.-||.. +|+||||..+||++..++ .+.++|||++.
T Consensus 90 E~~~g~~~vk~~i~~~~~~~-~~d~~~~~~~~~iG~~igklH~n---diiHGDLTTSNill~~~~~~~~~~lIdfgls~ 164 (229)
T KOG3087|consen 90 EFIDGASTVKDFILSTMEDE-SEDEGLAELARRIGELIGKLHDN---DIIHGDLTTSNILLRSDGNQITPILIDFGLSS 164 (229)
T ss_pred EeccchhHHHHHHHHHccCc-ccchhHHHHHHHHHHHHHHhhhC---CeecccccccceEEecCCCcCceEEEeecchh
Confidence 99977 47788775332222 22233367889999999999999 999999999999997554 35899999985
No 484
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.00 E-value=7.8e-11 Score=136.92 Aligned_cols=249 Identities=20% Similarity=0.178 Sum_probs=166.6
Q ss_pred HhhccccceEEeeeceEEEEEEEecC-CceEEEEEeccc---CcccHHHHHHHHHHHhcCCCCCcceeeeEEecCCcceE
Q 002278 614 STENLSEKYIVGYGASSTVYKCALKN-SRPIAVKKLYNQ---YPHNLREFETELETIGSIRHRNIVSLHGYALSPYGNLL 689 (943)
Q Consensus 614 ~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 689 (943)
.-+.+.+.+-+-+|+++.++.+.-.. +...+.|..... .....+....+-.+.-..++|-+++....+.-....++
T Consensus 802 S~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L 881 (1205)
T KOG0606|consen 802 SPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPL 881 (1205)
T ss_pred CCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcch
Confidence 34456666678899999999876442 333344433211 11122233333333333456777766555555667899
Q ss_pred EEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccC
Q 002278 690 FYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIP 769 (943)
Q Consensus 690 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~ 769 (943)
+++|+.+++|...++. .+..+.+........+..+.+|||.. .+.|||++|.|.+...+++.+++|||......
T Consensus 882 ~~~~~~~~~~~Skl~~---~~~~saepaRs~i~~~vqs~e~L~s~---~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg 955 (1205)
T KOG0606|consen 882 VGHYLNGGDLPSKLHN---SGCLSAEPARSPILERVQSLESLHSS---LRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVG 955 (1205)
T ss_pred hhHHhccCCchhhhhc---CCCcccccccchhHHHHhhhhccccc---hhhcccccccchhhcccCCcccCccccccccc
Confidence 9999999999999873 33455555666777888999999997 79999999999999999999999998443221
Q ss_pred CC------------------------------CCceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCCC
Q 002278 770 TA------------------------------MPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKAV 819 (943)
Q Consensus 770 ~~------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p~ 819 (943)
.- .........||+.|.|||...+......+|+|++|++++|.++|.+||
T Consensus 956 ~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~ 1035 (1205)
T KOG0606|consen 956 LIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPF 1035 (1205)
T ss_pred cccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCC
Confidence 00 001122356899999999999999999999999999999999999999
Q ss_pred CCCccHHHHHHHhccccccccccCcccccCccCHHHHHHHHHHHHHccCCCCCCCCCHH
Q 002278 820 DNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYPSERPTMQ 878 (943)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ 878 (943)
...........+..... -+|..... ......+++...+..+|.+|-.+.
T Consensus 1036 na~tpq~~f~ni~~~~~-----~~p~g~~~-----~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1036 NAETPQQIFENILNRDI-----PWPEGPEE-----GSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred CCcchhhhhhccccCCC-----CCCCCccc-----cChhhhhhhhhhhccCchhccCcc
Confidence 87665433322211111 12222111 112334567777788899987665
No 485
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.90 E-value=1.1e-09 Score=132.38 Aligned_cols=272 Identities=23% Similarity=0.267 Sum_probs=147.3
Q ss_pred CcccEEEeecccccCcCCCCCCcceEeEEEecCcc--ccccCCccccccCCCcEEecCCCCCCCCCCcccCCCCCcceEE
Q 002278 206 TSFEILDISYNQITGEIPYNIGFLQVATLSLQGNK--LTGKIPEVIGLMQALAVLDLSENELVGPIPPILGNLSYTGKLY 283 (943)
Q Consensus 206 ~~L~~L~Ls~N~l~~~~~~~~~~~~L~~L~L~~n~--l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 283 (943)
...+...+-+|++. .++......++++|-+.+|. +.....+.|..++.|++|||++|.=-+.+|..+++|-+|+.|+
T Consensus 523 ~~~rr~s~~~~~~~-~~~~~~~~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~ 601 (889)
T KOG4658|consen 523 NSVRRMSLMNNKIE-HIAGSSENPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLD 601 (889)
T ss_pred hheeEEEEeccchh-hccCCCCCCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhccc
Confidence 55677777777765 45555555577777777775 5555556677788888888888766567788888888888888
Q ss_pred ecCCCCCCCCCCCcCCCCcCcEEEcccCccccccccccCCcccceEEEccccccC--CcCcccccCCCcCcEEEeeCCcc
Q 002278 284 LHGNKLTGPIPPELGNMSKLSYLQLQNNQLVGTIPAELGKLEQLFELNLADNNLE--GPIPHNISSCTALNQFNVHGNRL 361 (943)
Q Consensus 284 L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~--~~~p~~~~~l~~L~~L~L~~N~l 361 (943)
|++..++ .+|..+.++++|.+|++..+.-...+|.....+++|++|.+..-... ...-..+..+.+|+.|.......
T Consensus 602 L~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~~~~~~~~l~el~~Le~L~~ls~~~~s~ 680 (889)
T KOG4658|consen 602 LSDTGIS-HLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRSALSNDKLLLKELENLEHLENLSITISSV 680 (889)
T ss_pred ccCCCcc-ccchHHHHHHhhheeccccccccccccchhhhcccccEEEeeccccccchhhHHhhhcccchhhheeecchh
Confidence 8888877 67777888888888888777655555666666777777777654421 12222334444444444432222
Q ss_pred cCcccccccccCccc----eeeccCCcCCCCCCCCCCCCCCccEEecCCCcCCCccCCCccc------ccccceeecccc
Q 002278 362 SGAIPSSFRNLGSLT----YLNLSRNNFKGKVPTELGRIINLDTLDLSVNNFSGSVPASIGD------LEHLLTLNLSRN 431 (943)
Q Consensus 362 ~~~~~~~~~~l~~L~----~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~------l~~L~~L~Ls~N 431 (943)
.+-..+..++.|. .+.+.++... ..+..+..+.+|+.|.+.++.+.......... ++++..+...++
T Consensus 681 --~~~e~l~~~~~L~~~~~~l~~~~~~~~-~~~~~~~~l~~L~~L~i~~~~~~e~~~~~~~~~~~~~~f~~l~~~~~~~~ 757 (889)
T KOG4658|consen 681 --LLLEDLLGMTRLRSLLQSLSIEGCSKR-TLISSLGSLGNLEELSILDCGISEIVIEWEESLIVLLCFPNLSKVSILNC 757 (889)
T ss_pred --HhHhhhhhhHHHHHHhHhhhhcccccc-eeecccccccCcceEEEEcCCCchhhcccccccchhhhHHHHHHHHhhcc
Confidence 0111122222222 2222222222 33445556666666666666654322211111 112222222222
Q ss_pred cccccCCccccCCCccceecccCccccccCChhhhcccccceecccCcccCC
Q 002278 432 HLNGLLPAEFGNLRSIQTIDMSFNQLSGSIPAELGQLQNIISLILNNNNLQG 483 (943)
Q Consensus 432 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 483 (943)
..- ..+....-.++|+.|++.++.....+.+....+..+..+.+..+.+.+
T Consensus 758 ~~~-r~l~~~~f~~~L~~l~l~~~~~~e~~i~~~k~~~~l~~~i~~f~~~~~ 808 (889)
T KOG4658|consen 758 HML-RDLTWLLFAPHLTSLSLVSCRLLEDIIPKLKALLELKELILPFNKLEG 808 (889)
T ss_pred ccc-cccchhhccCcccEEEEecccccccCCCHHHHhhhcccEEeccccccc
Confidence 211 112222233556666666555544444444444444444444444443
No 486
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.82 E-value=2.6e-09 Score=85.17 Aligned_cols=59 Identities=41% Similarity=0.579 Sum_probs=25.5
Q ss_pred CCCEEEeeCCcccccCCCCccCCCCCcEEeccCCCcCCccchhccccccceEEEecCcc
Q 002278 63 NLQSIDFQGNKLTGQIPDEIGNCGSLVHIELSDNSLYGDIPFSISKLKQLEFLNLKNNQ 121 (943)
Q Consensus 63 ~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~ 121 (943)
+|++|+|++|+|+...++.|.++++|++|+|++|+++...|.+|.++++|++|++++|+
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~ 60 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNN 60 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSS
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCc
Confidence 34444444444443333344444444444444444443333344444444444444443
No 487
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.81 E-value=6.4e-11 Score=131.52 Aligned_cols=130 Identities=31% Similarity=0.434 Sum_probs=90.0
Q ss_pred CccEEecCCCcCCCccCCCcccccccceeecccccccccCCccccCCCccceecccCccccccCCh-hhhcccccceecc
Q 002278 398 NLDTLDLSVNNFSGSVPASIGDLEHLLTLNLSRNHLNGLLPAEFGNLRSIQTIDMSFNQLSGSIPA-ELGQLQNIISLIL 476 (943)
Q Consensus 398 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~L 476 (943)
.|...+.+.|.+. .+-.++.-++.|+.||||+|+++.. ..+..|+.|++|||++|.|. .+|. ....++ |+.|+|
T Consensus 165 ~L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~~v--~~Lr~l~~LkhLDlsyN~L~-~vp~l~~~gc~-L~~L~l 239 (1096)
T KOG1859|consen 165 KLATASFSYNRLV-LMDESLQLLPALESLNLSHNKFTKV--DNLRRLPKLKHLDLSYNCLR-HVPQLSMVGCK-LQLLNL 239 (1096)
T ss_pred hHhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhhhh--HHHHhcccccccccccchhc-cccccchhhhh-heeeee
Confidence 5667777888777 5566677778888888888888754 36777788888888888887 4553 223333 788888
Q ss_pred cCcccCCCCCCcCccccCCcccccCCcccccc--CCCCcccCcCCCCccccCCCCCCCCC
Q 002278 477 NNNNLQGGIPDQLSNCFSLSNLNVSYNNLSGI--IPPIRNFSRFSSNSFIGNPLLCGNWI 534 (943)
Q Consensus 477 ~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~--~~~~~~~~~~~~~~~~~Np~~c~~~~ 534 (943)
+||.++... .+.++.+|+.||||+|-|++. ..++..+..+..+.++|||.-|.+|-
T Consensus 240 rnN~l~tL~--gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~c~p~h 297 (1096)
T KOG1859|consen 240 RNNALTTLR--GIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLCCAPWH 297 (1096)
T ss_pred cccHHHhhh--hHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccccCHHH
Confidence 888877432 356788888888888888763 22334455556667888887776553
No 488
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.81 E-value=4.4e-08 Score=96.87 Aligned_cols=126 Identities=21% Similarity=0.233 Sum_probs=82.6
Q ss_pred EEEEEEecCCceEEEEEecccC-------------cc-------------cHHHHHHHHHHHhcCCCC--CcceeeeEEe
Q 002278 631 TVYKCALKNSRPIAVKKLYNQY-------------PH-------------NLREFETELETIGSIRHR--NIVSLHGYAL 682 (943)
Q Consensus 631 ~Vy~~~~~~~~~vavK~~~~~~-------------~~-------------~~~~~~~E~~~l~~l~h~--niv~l~~~~~ 682 (943)
.||.|...++..+|||..+... .. ......+|.+.|.++..- ++.+++++.
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~- 79 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN- 79 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence 4899998889999999764211 00 122456899999999866 455565442
Q ss_pred cCCcceEEEEEcc--CCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHH-hhhCCCCCeEecCCCCccEEECCCCceee
Q 002278 683 SPYGNLLFYDYMV--NGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAY-LHHDCNPRIIHRDVKSSNILIDENFDAHL 759 (943)
Q Consensus 683 ~~~~~~lv~e~~~--~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~-LH~~~~~~ivH~Dlkp~Nill~~~~~~kl 759 (943)
..++||||++ |..+..+... .++......++.+++..+.. +|.. ||+|||+.+.||+++++ .+.+
T Consensus 80 ---~~~ivME~I~~~G~~~~~l~~~-----~~~~~~~~~~~~~il~~~~~~~~~~---givHGDLs~~NIlv~~~-~~~i 147 (188)
T PF01163_consen 80 ---RNVIVMEYIGEDGVPLPRLKDV-----DLSPEEPKELLEEILEEIIKMLHKA---GIVHGDLSEYNILVDDG-KVYI 147 (188)
T ss_dssp ---TTEEEEE--EETTEEGGCHHHC-----GGGGSTHHHHHHHHHHHHHHHHHCT---TEEESS-STTSEEEETT-CEEE
T ss_pred ---CCEEEEEecCCCccchhhHHhc-----cccchhHHHHHHHHHHHHHHHHHhc---CceecCCChhhEEeecc-eEEE
Confidence 5689999998 5455443321 11234456677777775555 4677 99999999999999987 8999
Q ss_pred cccccccccC
Q 002278 760 SDFGIARCIP 769 (943)
Q Consensus 760 ~DFGla~~~~ 769 (943)
+|||.+....
T Consensus 148 IDf~qav~~~ 157 (188)
T PF01163_consen 148 IDFGQAVDSS 157 (188)
T ss_dssp --GTTEEETT
T ss_pred EecCcceecC
Confidence 9999887543
No 489
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.81 E-value=3.9e-09 Score=84.11 Aligned_cols=61 Identities=43% Similarity=0.588 Sum_probs=51.9
Q ss_pred CCCcEEeccCCCcCCccchhccccccceEEEecCcccccCCCcccCCCCCCcEEEEecccc
Q 002278 86 GSLVHIELSDNSLYGDIPFSISKLKQLEFLNLKNNQLTGPIPSTLTQIPNLKTLDLARNQL 146 (943)
Q Consensus 86 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l 146 (943)
++|++|+|++|+|+...+..|.++++|++|++++|+++...+..|.++++|++|++++|+|
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 5788899999998855557888899999999999999888888889999999999998875
No 490
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.78 E-value=9.3e-08 Score=103.78 Aligned_cols=170 Identities=21% Similarity=0.313 Sum_probs=129.2
Q ss_pred ceEEEEEEEec-CCceEEEEEecccCcccHHHHHHHHHHHhcCCCCCcceeeeEEe----cCCcceEEEEEccC-CChhh
Q 002278 628 ASSTVYKCALK-NSRPIAVKKLYNQYPHNLREFETELETIGSIRHRNIVSLHGYAL----SPYGNLLFYDYMVN-GSLWD 701 (943)
Q Consensus 628 ~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~----~~~~~~lv~e~~~~-g~L~~ 701 (943)
-..+.|++... +|..|++|++..........-..-+++++++.|+|||++.++|. .+...++||+|.++ ++|.+
T Consensus 288 ~~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d 367 (655)
T KOG3741|consen 288 FSITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYD 367 (655)
T ss_pred ccceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHH
Confidence 44578999854 78999999994433333333345678899999999999999986 34457899999986 57777
Q ss_pred hccCC------------CCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccC
Q 002278 702 LLHGP------------SKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIP 769 (943)
Q Consensus 702 ~l~~~------------~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~ 769 (943)
+--.. ......++...|.++.|+..||.++|+. |+.-+-|.+.+|+++.+.+++|+..|......
T Consensus 368 ~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHss---GLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~ 444 (655)
T KOG3741|consen 368 LYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSS---GLACKTLDLKKILVTGKMRIRISGCGIMDVLQ 444 (655)
T ss_pred HHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhc---CceeecccHhHeEeeCcceEEEecccceeeec
Confidence 53211 1233577899999999999999999999 99999999999999999999999999876654
Q ss_pred CCCCceeeeEecccceeCccccccCCCCCcchhhhHHHHHHHHHhCCCC
Q 002278 770 TAMPHASTFVLGTIGYIDPEYAHTSRLNEKSDVYSFGIVLLEILTGKKA 818 (943)
Q Consensus 770 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltG~~p 818 (943)
.+.. |.+. --.+-|.=.||.+++.|.||..-
T Consensus 445 ~d~~---------------~~le---~~Qq~D~~~lG~ll~aLAt~~~n 475 (655)
T KOG3741|consen 445 EDPT---------------EPLE---SQQQNDLRDLGLLLLALATGTEN 475 (655)
T ss_pred CCCC---------------cchh---HHhhhhHHHHHHHHHHHhhcccc
Confidence 4320 1111 12367889999999999999553
No 491
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.77 E-value=2e-07 Score=98.57 Aligned_cols=263 Identities=12% Similarity=0.085 Sum_probs=153.4
Q ss_pred ccceEEeeeceEEEEEEEecCCceEEEEEecccCcccHHHHHHHHHHHhcC-CCCCcceeeeE----Ee--cCCc-ceEE
Q 002278 619 SEKYIVGYGASSTVYKCALKNSRPIAVKKLYNQYPHNLREFETELETIGSI-RHRNIVSLHGY----AL--SPYG-NLLF 690 (943)
Q Consensus 619 ~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~----~~--~~~~-~~lv 690 (943)
...+.+|+|+-+.+|..-.-. ..+.|+..+..+....+. ++.|... .||-+-.=+.+ .. +... .-+.
T Consensus 14 ~~gr~LgqGgea~ly~l~e~~--d~VAKIYh~Pppa~~aqk---~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iGfl 88 (637)
T COG4248 14 PPGRPLGQGGEADLYTLGEVR--DQVAKIYHAPPPAAQAQK---VAELAATPDAPLLNYRVAWPQATLHGGRRGKVIGFL 88 (637)
T ss_pred CCCccccCCccceeeecchhh--chhheeecCCCchHHHHH---HHHhccCCCCcchhhhhcccHHHhhCCCccceeEEe
Confidence 345679999999999653221 224566655444322222 2333333 46644331111 11 1111 3456
Q ss_pred EEEccCC-Chhhhcc---CCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeeccccccc
Q 002278 691 YDYMVNG-SLWDLLH---GPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIAR 766 (943)
Q Consensus 691 ~e~~~~g-~L~~~l~---~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~ 766 (943)
|..+.+. -..++.. ++.......|.-.+++++.+|.+.+.||.. |.+-||+.++|+|+.+++.|.+.|-..-.
T Consensus 89 mP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~---Gh~vGDVn~~~~lVsd~~~V~LVdsDsfq 165 (637)
T COG4248 89 MPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEH---GHVVGDVNQNSFLVSDDSKVVLVDSDSFQ 165 (637)
T ss_pred cccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhc---CCcccccCccceeeecCceEEEEccccee
Confidence 7666554 2222222 122344588999999999999999999999 99999999999999999999999854332
Q ss_pred ccCCCCCceeeeEecccceeCccccc-----cCCCCCcchhhhHHHHHHHHHhC-CCCCCCC-------ccHHHHHHHhc
Q 002278 767 CIPTAMPHASTFVLGTIGYIDPEYAH-----TSRLNEKSDVYSFGIVLLEILTG-KKAVDNE-------SNLHQLIMSKA 833 (943)
Q Consensus 767 ~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlGvil~elltG-~~p~~~~-------~~~~~~~~~~~ 833 (943)
... ........+|...|.+||.-. +-.-+...|-|.+||++++++.| ++||.+. ...+..+....
T Consensus 166 i~~--ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~g~ 243 (637)
T COG4248 166 INA--NGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAHGR 243 (637)
T ss_pred ecc--CCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhhcce
Confidence 221 122233345899999999643 44567889999999999999885 9999742 22221111100
Q ss_pred cccccccccCccc--ccCccCHHHHHHHHHHHHHccCC--CCCCCCCHHHHHHHHhhcCCCCC
Q 002278 834 DDNTVMEAVDPEV--SVTCVDLSAVRKTFQLALLCTKR--YPSERPTMQEVARVLVSLLPAPP 892 (943)
Q Consensus 834 ~~~~~~~~~~~~~--~~~~~~~~~~~~l~~l~~~cl~~--dP~~RPt~~el~~~L~~~~~~~~ 892 (943)
-... .+.-.+.. +...+-.-....+..+..+|... .|.-|||++..+..|........
T Consensus 244 f~ya-~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al~~~L~ 305 (637)
T COG4248 244 FAYA-SDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDALRQQLK 305 (637)
T ss_pred eeec-hhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHHhhh
Confidence 0000 00000000 00111111123444556666543 26689999988887765554433
No 492
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.72 E-value=6.9e-08 Score=97.43 Aligned_cols=135 Identities=21% Similarity=0.193 Sum_probs=96.5
Q ss_pred cccceEEeeeceEEEEEEEecCCceEEEEEecccC-----------------c-----ccHHHHHHHHHHHhcCCCC--C
Q 002278 618 LSEKYIVGYGASSTVYKCALKNSRPIAVKKLYNQY-----------------P-----HNLREFETELETIGSIRHR--N 673 (943)
Q Consensus 618 ~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~-----------------~-----~~~~~~~~E~~~l~~l~h~--n 673 (943)
..+...||-|.-|.||.|....|.++|||.-.... . ......++|.++|+.+.-. .
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~ 172 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVK 172 (304)
T ss_pred HhhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCC
Confidence 44567899999999999999999999999542110 0 1123457899999998754 5
Q ss_pred cceeeeEEecCCcceEEEEEccCCChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECC
Q 002278 674 IVSLHGYALSPYGNLLFYDYMVNGSLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDE 753 (943)
Q Consensus 674 iv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~ 753 (943)
|.+.+++ +.+.+|||+++|-.|...- ++.+..-.++..|.+-+..+-.. ||||+|+.+-||++++
T Consensus 173 VP~P~~~----nRHaVvMe~ieG~eL~~~r--------~~~en~~~il~~il~~~~~~~~~---GiVHGDlSefNIlV~~ 237 (304)
T COG0478 173 VPKPIAW----NRHAVVMEYIEGVELYRLR--------LDVENPDEILDKILEEVRKAYRR---GIVHGDLSEFNILVTE 237 (304)
T ss_pred CCCcccc----ccceeeeehcccceeeccc--------CcccCHHHHHHHHHHHHHHHHHc---CccccCCchheEEEec
Confidence 6666553 4678999999886664422 12333344444455444444455 9999999999999999
Q ss_pred CCceeecccccccc
Q 002278 754 NFDAHLSDFGIARC 767 (943)
Q Consensus 754 ~~~~kl~DFGla~~ 767 (943)
+|.++++||--+..
T Consensus 238 dg~~~vIDwPQ~v~ 251 (304)
T COG0478 238 DGDIVVIDWPQAVP 251 (304)
T ss_pred CCCEEEEeCccccc
Confidence 99999999987653
No 493
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.70 E-value=1.2e-07 Score=99.67 Aligned_cols=140 Identities=12% Similarity=0.065 Sum_probs=98.2
Q ss_pred EEeeeceEEEEEEEecCCceEEEEEecccCcc-----------cHHHHHHHHHHHhcCCCCCc--ceeeeEEec-----C
Q 002278 623 IVGYGASSTVYKCALKNSRPIAVKKLYNQYPH-----------NLREFETELETIGSIRHRNI--VSLHGYALS-----P 684 (943)
Q Consensus 623 ~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-----------~~~~~~~E~~~l~~l~h~ni--v~l~~~~~~-----~ 684 (943)
.+-......|+++.. +|+.|.||+....... ....+.+|.+.+.++...+| .++++++.. .
T Consensus 29 ~v~~~~~rrvvr~~~-~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~ 107 (268)
T PRK15123 29 VFRELEGRRTLRFEL-AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPAT 107 (268)
T ss_pred EEecCCCceEEEEEE-CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCcc
Confidence 344444445667655 4678999976433211 11247788888888754333 344455543 2
Q ss_pred CcceEEEEEccCC-ChhhhccCCCCCccCCHHHHHHHHHHHHHHHHHhhhCCCCCeEecCCCCccEEECC-------CCc
Q 002278 685 YGNLLFYDYMVNG-SLWDLLHGPSKKVKLDWETRLKIAVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDE-------NFD 756 (943)
Q Consensus 685 ~~~~lv~e~~~~g-~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~-------~~~ 756 (943)
...++|+|++++. +|.+++.... ....+......++.+++..++-||.. ||+|+|++++|||++. ++.
T Consensus 108 ~~s~LVte~l~~~~sL~~~~~~~~-~~~~~~~~~~~ll~~la~~i~~LH~~---Gi~HgDL~~~NiLl~~~~~~~~~~~~ 183 (268)
T PRK15123 108 RTSFIITEDLAPTISLEDYCADWA-TNPPDPRLKRMLIKRVATMVRDMHAA---GINHRDCYICHFLLHLPFPGREEDLK 183 (268)
T ss_pred ceeEEEEeeCCCCccHHHHHHhhc-ccCCCHHHHHHHHHHHHHHHHHHHHC---cCccCCCChhhEEEeccccCCCCCce
Confidence 2468999999886 8988874211 23455667788999999999999999 9999999999999975 467
Q ss_pred eeecccccccc
Q 002278 757 AHLSDFGIARC 767 (943)
Q Consensus 757 ~kl~DFGla~~ 767 (943)
+.++||+.++.
T Consensus 184 ~~LIDl~r~~~ 194 (268)
T PRK15123 184 LSVIDLHRAQI 194 (268)
T ss_pred EEEEECCcccc
Confidence 99999998753
No 494
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.70 E-value=1.1e-09 Score=121.87 Aligned_cols=180 Identities=32% Similarity=0.371 Sum_probs=122.8
Q ss_pred CCCcCCCCcCcEEEcccCccccccccccCCc-ccceEEEccccccCC---cCc---ccccCC---CcCcEEEeeCCcccC
Q 002278 294 PPELGNMSKLSYLQLQNNQLVGTIPAELGKL-EQLFELNLADNNLEG---PIP---HNISSC---TALNQFNVHGNRLSG 363 (943)
Q Consensus 294 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l-~~L~~L~L~~N~l~~---~~p---~~~~~l---~~L~~L~L~~N~l~~ 363 (943)
|-.+..+.+|+.|.|.++.|.. ...+..+ .+|+.|.- .|.+.. ++. +.|++- ..|...+.+.|.+.
T Consensus 102 pi~ifpF~sLr~LElrg~~L~~--~~GL~~lr~qLe~LIC-~~Sl~Al~~v~ascggd~~ns~~Wn~L~~a~fsyN~L~- 177 (1096)
T KOG1859|consen 102 PISIFPFRSLRVLELRGCDLST--AKGLQELRHQLEKLIC-HNSLDALRHVFASCGGDISNSPVWNKLATASFSYNRLV- 177 (1096)
T ss_pred CceeccccceeeEEecCcchhh--hhhhHHHHHhhhhhhh-hccHHHHHHHHHHhccccccchhhhhHhhhhcchhhHH-
Confidence 5567778889999999998873 1122222 23444432 222220 111 112221 25777788888887
Q ss_pred cccccccccCccceeeccCCcCCCCCCCCCCCCCCccEEecCCCcCCCccCCCcccccccceeecccccccccCCccccC
Q 002278 364 AIPSSFRNLGSLTYLNLSRNNFKGKVPTELGRIINLDTLDLSVNNFSGSVPASIGDLEHLLTLNLSRNHLNGLLPAEFGN 443 (943)
Q Consensus 364 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 443 (943)
....++.-++.|+.|+|++|+++.. +.+..++.|++|||++|.+..+.--...++. |+.|.|++|.+++. ..+.+
T Consensus 178 ~mD~SLqll~ale~LnLshNk~~~v--~~Lr~l~~LkhLDlsyN~L~~vp~l~~~gc~-L~~L~lrnN~l~tL--~gie~ 252 (1096)
T KOG1859|consen 178 LMDESLQLLPALESLNLSHNKFTKV--DNLRRLPKLKHLDLSYNCLRHVPQLSMVGCK-LQLLNLRNNALTTL--RGIEN 252 (1096)
T ss_pred hHHHHHHHHHHhhhhccchhhhhhh--HHHHhcccccccccccchhccccccchhhhh-heeeeecccHHHhh--hhHHh
Confidence 6677788888899999999998743 3778888899999999988843333344444 88899999988854 45778
Q ss_pred CCccceecccCccccccCC-hhhhcccccceecccCcccC
Q 002278 444 LRSIQTIDMSFNQLSGSIP-AELGQLQNIISLILNNNNLQ 482 (943)
Q Consensus 444 l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~ 482 (943)
|++|+.||+++|-|.+.-. .-++.|..|+.|+|.||.+-
T Consensus 253 LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~ 292 (1096)
T KOG1859|consen 253 LKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLC 292 (1096)
T ss_pred hhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccc
Confidence 8889999999998875322 34677888888899998875
No 495
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.56 E-value=3.2e-08 Score=111.54 Aligned_cols=151 Identities=19% Similarity=0.287 Sum_probs=102.4
Q ss_pred HHHHHHHHHHhhhCCCCCeEecCCCCccEEECCCCceeecccccccccCCCCCce--------eeeEecccceeCccccc
Q 002278 721 AVGAAQGLAYLHHDCNPRIIHRDVKSSNILIDENFDAHLSDFGIARCIPTAMPHA--------STFVLGTIGYIDPEYAH 792 (943)
Q Consensus 721 ~~~i~~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~DFGla~~~~~~~~~~--------~~~~~gt~~y~aPE~~~ 792 (943)
+.+++.|+.|+|.. +++||++|.|++|.+++.+..||+.|+.+.......... .....-...|.|||++.
T Consensus 105 l~~v~dgl~flh~s--Ak~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~ 182 (700)
T KOG2137|consen 105 LGNVADGLAFLHRS--AKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLL 182 (700)
T ss_pred hhcccchhhhhccC--cceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhc
Confidence 34555999999976 599999999999999999999999999886543311110 01112346799999999
Q ss_pred cCCCCCcchhhhHHHHHHHHH-hCCCCCCCCccHHHHHHHhccccccccccCcccccCccCHHHHHHHHHHHHHccCCCC
Q 002278 793 TSRLNEKSDVYSFGIVLLEIL-TGKKAVDNESNLHQLIMSKADDNTVMEAVDPEVSVTCVDLSAVRKTFQLALLCTKRYP 871 (943)
Q Consensus 793 ~~~~~~~~DvwSlGvil~ell-tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP 871 (943)
+...+.++|+||+||++|.+. .|+.-+................+....... ...+.++.+-+.+++..++
T Consensus 183 ~~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~~~~~~~~~~~~s---------~~~p~el~~~l~k~l~~~~ 253 (700)
T KOG2137|consen 183 GTTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFSRNLLNAGAFGYS---------NNLPSELRESLKKLLNGDS 253 (700)
T ss_pred cccccccccceeeeeEEEEEecCCcchhhccCCcchhhhhhccccccccccc---------ccCcHHHHHHHHHHhcCCc
Confidence 988899999999999999999 566655543222211111111111011111 1223566677888999999
Q ss_pred CCCCCHHHHHH
Q 002278 872 SERPTMQEVAR 882 (943)
Q Consensus 872 ~~RPt~~el~~ 882 (943)
..||++.++..
T Consensus 254 ~~rp~~~~l~~ 264 (700)
T KOG2137|consen 254 AVRPTLDLLLS 264 (700)
T ss_pred ccCcchhhhhc
Confidence 99998777654
No 496
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.56 E-value=3.3e-09 Score=94.39 Aligned_cols=131 Identities=21% Similarity=0.304 Sum_probs=78.9
Q ss_pred ccceeeccCCcCCCCCCCC---CCCCCCccEEecCCCcCCCccCCCc-ccccccceeecccccccccCCccccCCCccce
Q 002278 374 SLTYLNLSRNNFKGKVPTE---LGRIINLDTLDLSVNNFSGSVPASI-GDLEHLLTLNLSRNHLNGLLPAEFGNLRSIQT 449 (943)
Q Consensus 374 ~L~~L~L~~N~l~~~~~~~---~~~l~~L~~L~Ls~N~l~~~~~~~~-~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 449 (943)
.+..++|+++++. .+++. +.....|+..+|++|.+.. .|..| ...+.++.|+|++|+|+ .+|.++..++.|+.
T Consensus 28 E~h~ldLssc~lm-~i~davy~l~~~~el~~i~ls~N~fk~-fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~ 104 (177)
T KOG4579|consen 28 ELHFLDLSSCQLM-YIADAVYMLSKGYELTKISLSDNGFKK-FPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRS 104 (177)
T ss_pred Hhhhcccccchhh-HHHHHHHHHhCCceEEEEecccchhhh-CCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhh
Confidence 3455666666654 23332 3334455666777777773 44444 33456777777777777 46666777777777
Q ss_pred ecccCccccccCChhhhcccccceecccCcccCCCCCCcCccccCCcccccCCccccccC
Q 002278 450 IDMSFNQLSGSIPAELGQLQNIISLILNNNNLQGGIPDQLSNCFSLSNLNVSYNNLSGII 509 (943)
Q Consensus 450 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~ 509 (943)
|++++|.|. ..|..+..|.+|-.|+..+|.+. .+|..+.--..+...++.+|++.+--
T Consensus 105 lNl~~N~l~-~~p~vi~~L~~l~~Lds~~na~~-eid~dl~~s~~~al~~lgnepl~~~~ 162 (177)
T KOG4579|consen 105 LNLRFNPLN-AEPRVIAPLIKLDMLDSPENARA-EIDVDLFYSSLPALIKLGNEPLGDET 162 (177)
T ss_pred cccccCccc-cchHHHHHHHhHHHhcCCCCccc-cCcHHHhccccHHHHHhcCCcccccC
Confidence 777777777 56666777777777777777776 44444322233333445555555443
No 497
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.47 E-value=1.9e-08 Score=101.14 Aligned_cols=77 Identities=22% Similarity=0.242 Sum_probs=38.3
Q ss_pred cceEEecCCCCCCCCCCCcCCCCcCcEEEcccCcccccc-ccccCCcccceEEEccccccCCcC-cccccCCCcCcEEEe
Q 002278 279 TGKLYLHGNKLTGPIPPELGNMSKLSYLQLQNNQLVGTI-PAELGKLEQLFELNLADNNLEGPI-PHNISSCTALNQFNV 356 (943)
Q Consensus 279 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~-~~~~~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~L 356 (943)
+..++++-|++... ++++..+.+..|.+.... ...+..++.+--|+|+.|+|.... -+++..++.|..|.+
T Consensus 184 ~~~~w~~~~~l~r~-------Fpnv~sv~v~e~PlK~~s~ek~se~~p~~~~LnL~~~~idswasvD~Ln~f~~l~dlRv 256 (418)
T KOG2982|consen 184 LEQLWLNKNKLSRI-------FPNVNSVFVCEGPLKTESSEKGSEPFPSLSCLNLGANNIDSWASVDALNGFPQLVDLRV 256 (418)
T ss_pred HHHHHHHHHhHHhh-------cccchheeeecCcccchhhcccCCCCCcchhhhhcccccccHHHHHHHcCCchhheeec
Confidence 33444455555432 245555666666554221 123444555556666666664321 133445555555555
Q ss_pred eCCccc
Q 002278 357 HGNRLS 362 (943)
Q Consensus 357 ~~N~l~ 362 (943)
++|.+.
T Consensus 257 ~~~Pl~ 262 (418)
T KOG2982|consen 257 SENPLS 262 (418)
T ss_pred cCCccc
Confidence 655554
No 498
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.46 E-value=8.7e-07 Score=90.27 Aligned_cols=107 Identities=24% Similarity=0.244 Sum_probs=82.8
Q ss_pred HHHHHHHHHHHhcCCCCC--cceeeeEEecCC----cceEEEEEccCC-ChhhhccCCCCCccCCHHHHHHHHHHHHHHH
Q 002278 656 LREFETELETIGSIRHRN--IVSLHGYALSPY----GNLLFYDYMVNG-SLWDLLHGPSKKVKLDWETRLKIAVGAAQGL 728 (943)
Q Consensus 656 ~~~~~~E~~~l~~l~h~n--iv~l~~~~~~~~----~~~lv~e~~~~g-~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l 728 (943)
.....+|.+.+..+...+ +.+.+++..... ..++|+|++++. +|.+++... ...+......++.+++..+
T Consensus 55 ~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~---~~~~~~~~~~ll~~l~~~i 131 (206)
T PF06293_consen 55 RSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQW---EQLDPSQRRELLRALARLI 131 (206)
T ss_pred chHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhh---cccchhhHHHHHHHHHHHH
Confidence 346778888877775333 445566655432 348999999884 799988631 2256677888999999999
Q ss_pred HHhhhCCCCCeEecCCCCccEEECCCC---ceeeccccccccc
Q 002278 729 AYLHHDCNPRIIHRDVKSSNILIDENF---DAHLSDFGIARCI 768 (943)
Q Consensus 729 ~~LH~~~~~~ivH~Dlkp~Nill~~~~---~~kl~DFGla~~~ 768 (943)
+-||+. ||+|+|+++.|||++.++ .+.++||+-++..
T Consensus 132 ~~lH~~---gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~ 171 (206)
T PF06293_consen 132 AKLHDA---GIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFR 171 (206)
T ss_pred HHHHHC---cCCCCCCCcccEEEeCCCCceeEEEEcchhceeC
Confidence 999999 999999999999999876 8999999987643
No 499
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.42 E-value=1.9e-08 Score=89.64 Aligned_cols=113 Identities=29% Similarity=0.345 Sum_probs=81.8
Q ss_pred CccceeeccCCcCCCCCCCCCC-CCCCccEEecCCCcCCCccCCCcccccccceeecccccccccCCccccCCCccceec
Q 002278 373 GSLTYLNLSRNNFKGKVPTELG-RIINLDTLDLSVNNFSGSVPASIGDLEHLLTLNLSRNHLNGLLPAEFGNLRSIQTID 451 (943)
Q Consensus 373 ~~L~~L~L~~N~l~~~~~~~~~-~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 451 (943)
..|+..+|++|.++ .+|..|. ..+.++.|+|++|.|+ .+|..+..++.|+.|+++.|.+. ..|..|..|.+|-.||
T Consensus 53 ~el~~i~ls~N~fk-~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~lNl~~N~l~-~~p~vi~~L~~l~~Ld 129 (177)
T KOG4579|consen 53 YELTKISLSDNGFK-KFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSLNLRFNPLN-AEPRVIAPLIKLDMLD 129 (177)
T ss_pred ceEEEEecccchhh-hCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhcccccCccc-cchHHHHHHHhHHHhc
Confidence 45666677888777 4444443 3447788888888888 57777888888888888888887 5677777788888888
Q ss_pred ccCccccccCChhhhcccccceecccCcccCCCCCCcC
Q 002278 452 MSFNQLSGSIPAELGQLQNIISLILNNNNLQGGIPDQL 489 (943)
Q Consensus 452 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~ 489 (943)
..+|.+. .+|..+-.-...-..++.++.+.+.-+..+
T Consensus 130 s~~na~~-eid~dl~~s~~~al~~lgnepl~~~~~~kl 166 (177)
T KOG4579|consen 130 SPENARA-EIDVDLFYSSLPALIKLGNEPLGDETKKKL 166 (177)
T ss_pred CCCCccc-cCcHHHhccccHHHHHhcCCcccccCcccc
Confidence 8888887 666655444445556677888877655443
No 500
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.39 E-value=5.6e-08 Score=97.80 Aligned_cols=87 Identities=25% Similarity=0.308 Sum_probs=47.6
Q ss_pred CCCCCEEEeeCCcccccCC-CCcc-CCCCCcEEeccCCCcCCc--cchhccccccceEEEecCcccccCCCcccCCCCCC
Q 002278 61 LRNLQSIDFQGNKLTGQIP-DEIG-NCGSLVHIELSDNSLYGD--IPFSISKLKQLEFLNLKNNQLTGPIPSTLTQIPNL 136 (943)
Q Consensus 61 l~~L~~L~Ls~n~l~~~~p-~~~~-~l~~L~~L~Ls~N~l~~~--~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L 136 (943)
+..++-|-+.++.|..+.- ..|+ ..+.++.|||.+|.|+.. +..-+.+|+.|+.|+|++|++...+...-..+.+|
T Consensus 44 ~ra~ellvln~~~id~~gd~~~~~~~~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~lp~p~~nl 123 (418)
T KOG2982|consen 44 LRALELLVLNGSIIDNEGDVMLFGSSVTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSLPLPLKNL 123 (418)
T ss_pred ccchhhheecCCCCCcchhHHHHHHHhhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccCcccccce
Confidence 3344455555555542111 1122 356677777777777632 22334567777777777777763332222455677
Q ss_pred cEEEEeccccc
Q 002278 137 KTLDLARNQLT 147 (943)
Q Consensus 137 ~~L~Ls~N~l~ 147 (943)
++|-|.+..+.
T Consensus 124 ~~lVLNgT~L~ 134 (418)
T KOG2982|consen 124 RVLVLNGTGLS 134 (418)
T ss_pred EEEEEcCCCCC
Confidence 77777766655
Done!