Your job contains 1 sequence.
>002279
MNNSSLLTTPTSNRPLLFSPFLNPSPLPKRRRFKVSFPRNRSAATSASASAEATPTATPS
DNIWGPRKELQGIQPVVDKLSPPVRLATSAVVIAGAVFAGFKLGSKYGGGSRNVAIGGAA
ILGAAGGAMAYAMNAAVPEVAAKRLHDYVTDCNDPGAVKREDIEAIASKYGVSKQDEAFN
AELSEIYCRFVTSVLPPGGEDLRGDEVDKIVQFKKALGIDDPDAAAMHVEIGRRLFRQRL
EVGDRDGDMEQRWAFQKLIYVSTLVFGEASSFLLPWKRVFKVTDSQVEIAIRDNAKRLYA
SKLKSVGRDVDAEHIVRLREEQLSYRLSDALAEDLFREHTRKLVEENIVTALSILKSRTR
VVKGVAQVVEELDKVLAFNNLLISLRQHPNADRFARGVGPVSLVGGEFDGDRKMDDLKLL
YRAYVTDSLSGGRMEESKLAALNQLRNIFGLGKRESEAIIVDVTSKVYRKRLGQAVSGGA
LEAADSKASFLQSLCEELHFDPQKASEIHEEIYRQKLQQCVADGELNDEDVAALLRLRVM
LCVPQQTVEAAHSDICGSLFEKVVKDAISSGVEGYDGEVKKAVRKAAHGLRLTREAAMSI
ASKAVRRIFVIYIKRARAAENRTEAAKELKKLITFNTLVVTELVADIKGESSDTSEEEPI
KEEEKQTDEDEEEWESLETLKKITPSKELAEKMGKPGQTEINLKDDLPERDRTDLYKTYL
LYCLTGEVTKIPFGASITTKKDDSEYVLLSQLGGILGLTTKEIVDVHRGLAEQAFRQQAE
VILADGQLTKARIEQLNEVQKQVGLPSEYAQKIIKNITTTKMAAAIETAVAQGKLNIKQI
RELKEASVDLDNMISESLRENLFKKTVDEIFSSGTGEFDAEEVYEKIPADLSINAEKARR
VVHELARNRLSNSLIQAVSLLRQKNRQGVLCQLSRCLGNCQMS
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 002279
(943 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2007437 - symbol:TIC110 "translocon at the inn... 2993 5.1e-312 1
>TAIR|locus:2007437 [details] [associations]
symbol:TIC110 "translocon at the inner envelope membrane
of chloroplasts 110" species:3702 "Arabidopsis thaliana"
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0009658 "chloroplast
organization" evidence=IMP] [GO:0031897 "Tic complex" evidence=TAS]
[GO:0045037 "protein import into chloroplast stroma" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0016020 "membrane"
evidence=IDA] [GO:0045036 "protein targeting to chloroplast"
evidence=RCA] [GO:0009536 "plastid" evidence=IDA] GO:GO:0016021
EMBL:CP002684 GO:GO:0009658 EMBL:AC067971 GO:GO:0031897
GO:GO:0045037 EMBL:AC011001 EMBL:AY094426 EMBL:AY099850
EMBL:AK229869 IPI:IPI00540685 PIR:B86204 RefSeq:NP_172176.1
UniGene:At.12081 IntAct:Q8LPR9 STRING:Q8LPR9 PRIDE:Q8LPR9
EnsemblPlants:AT1G06950.1 GeneID:837205 KEGG:ath:AT1G06950
TAIR:At1g06950 eggNOG:NOG259340 HOGENOM:HOG000243512
InParanoid:Q8LPR9 OMA:HMEIGRR PhylomeDB:Q8LPR9
ProtClustDB:CLSN2682158 Genevestigator:Q8LPR9 Uniprot:Q8LPR9
Length = 1016
Score = 2993 (1058.6 bits), Expect = 5.1e-312, P = 5.1e-312
Identities = 597/908 (65%), Positives = 710/908 (78%)
Query: 30 RRRFKVSFPRNRXXXXXXXXXXXXXXXXXXXDNIWGPRKELQGIQPVVDKLSPPVRLATS 89
RRR++VSFPR+ I G +KEL G+QP+V+K++PPVRLATS
Sbjct: 41 RRRYRVSFPRS----SAASSDQLSVSTQAKNPGIHGNKKELTGLQPIVEKMTPPVRLATS 96
Query: 90 XXXXXXXXXXXXKLGSKYGGGSRNVXXXXXXXXXXXXXXXXXXXXXXVPEVAAKRLHDYV 149
LG + G SRN+ VPEVAA LH+YV
Sbjct: 97 AVVLAASLATGYGLGLRLAG-SRNIAFGGAAVAGAAGGAVVYALNSAVPEVAAISLHNYV 155
Query: 150 TDCNDPGAVKREDIEAIASKYGVSKQDEAFNAELSEIYCRFVTSVLPPGGEDLRGDEVDK 209
+ DP +V ++D+E IA +YGV+K DEAF AE+ +IYCR+VTSVLP G+ L+GDEV K
Sbjct: 156 AEFEDPASVTKDDVEKIADRYGVNKGDEAFQAEICDIYCRYVTSVLPTEGQSLKGDEVAK 215
Query: 210 IVQFKKALGIDDPDAAAMHVEIGRRLFRQRLEVGDRDGDMEQRWAFQKLIYVSTLVFGEA 269
IV+FK ALGID+PDAAAMH+EIGRR+FRQRLE G+R+GD EQR AF +L+YVS LVFG+A
Sbjct: 216 IVKFKNALGIDEPDAAAMHMEIGRRIFRQRLETGEREGDAEQRRAFMRLVYVSALVFGDA 275
Query: 270 SSFLLPWKRVFKVTDSQVEIAIRDNAKRLYASKLKSVGRDVDAEHIVRLREEQLSYRLSD 329
SSFLLPWKRV KVTD+QVEIAIR+NAK+LYA +LK VGRD++ E++V LR+ QLS++LSD
Sbjct: 276 SSFLLPWKRVLKVTDAQVEIAIRENAKQLYAERLKLVGRDINVENLVDLRKSQLSFKLSD 335
Query: 330 ALAEDLFREHTRKLVEENIVTALSILKSRTRVVKGVAQVVEELDKVLAFNNLLISLRQHP 389
LAEDLFREHTRK+V ENI +ALSILKSRTR K +A VVEEL+KVL FNNLL+SL+ H
Sbjct: 336 ELAEDLFREHTRKVVVENISSALSILKSRTRAAKSLASVVEELEKVLEFNNLLVSLKSHS 395
Query: 390 NADRFARGVGPVSLVGGEFDGDRKMDDLKLLYRAYVTDSLSGGRMEESKLAALNQLRNIF 449
AD+FARGVGP+SL+G E D +R+MDDLKLLYRAYVTD+LSGGR+EE+KL A++QLRNI
Sbjct: 396 EADQFARGVGPISLIGDESDFERRMDDLKLLYRAYVTDALSGGRLEENKLVAMSQLRNIL 455
Query: 450 GLGKRESEAIIVDVTSKVYRKRLGQAVSGGALEAADSKASFLQSLCEELHFDPQKASEIH 509
GLGKRE+EAI VDVTSK YRKRL AVS G LEA DSKA +LQ LCEELHFD QKA IH
Sbjct: 456 GLGKREAEAISVDVTSKSYRKRLANAVSSGDLEAQDSKAKYLQKLCEELHFDAQKAGAIH 515
Query: 510 EEIYRQKLQQCVADGELNDEDVAALLRLRVMLCVPQQTVEAAHSDICGSLFEKVVKDAIS 569
EEIYRQKLQQCV DGEL+D++VAALLRLRVMLC+PQQTV+ AH++ICG++FEKVV+DAIS
Sbjct: 516 EEIYRQKLQQCVTDGELSDDNVAALLRLRVMLCIPQQTVDTAHAEICGTIFEKVVRDAIS 575
Query: 570 SGVEGYDGEVKKAVRKAAHGLRLTREAAMSIASKAVRRIFVIYIKXXXXXXXXXXXXXXL 629
SGV+GYD E +K+VRKAAHGLRL+RE AMSIASKAVRR+F YI+ L
Sbjct: 576 SGVDGYDAETRKSVRKAAHGLRLSRETAMSIASKAVRRVFTNYIRRARAAENRTDSAKEL 635
Query: 630 KKLITFNTLVVTELVADIKGESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXITPSKEL 689
KK+I FNTLVVTE+VADIKGES P KEL
Sbjct: 636 KKMIAFNTLVVTEMVADIKGESSDKAPEEDPVQEKEEDDEDEEWGSLESLRKT-RPDKEL 694
Query: 690 AEKMGKPGQTEINLKDDLPERDRTDLYKTYLLYCLTGEVTKIPFGASITTKKDDSEYVLL 749
AEKMGKPGQTEI LKDDLP+RDR DLYKTYLLYC+TGEVT+IPFGA ITTK+DDSEY+LL
Sbjct: 695 AEKMGKPGQTEITLKDDLPDRDRIDLYKTYLLYCVTGEVTRIPFGAQITTKRDDSEYLLL 754
Query: 750 SQLGGILGLTTKEIVDVHRGLAEQAFRQQAEVILADGQLTKARIEQLNEVQKQVGLPSEY 809
+QLGGILGL++KEIV++H GLAEQAFRQQAEVILADGQLTKAR+EQL+E+QKQVGLP
Sbjct: 755 NQLGGILGLSSKEIVNIHVGLAEQAFRQQAEVILADGQLTKARVEQLDELQKQVGLPQPQ 814
Query: 810 AQKIIKNITTTKMAAAIETAVAQGKLNIKQIRELKEASVDLDNMISESLRENLFKKTVDE 869
A+K+IKNITTTKMA AIETAV QG+LNIKQIRELKEA+V LD+MI+ SLRE LFKKTV +
Sbjct: 815 AEKVIKNITTTKMANAIETAVNQGRLNIKQIRELKEANVSLDSMIAVSLREKLFKKTVSD 874
Query: 870 IFSSGTGEFDAEEVYEKIPADLSINAEKARRVVHELARNRLSNSLIQAVSLLRQKNRQGV 929
IFSSGTGEFD EVY+ IP+DLSI+ EKA+RVVH+LA++RLSNSL+QAV+LLRQ+N +GV
Sbjct: 875 IFSSGTGEFDETEVYQTIPSDLSIDVEKAKRVVHDLAQSRLSNSLVQAVALLRQRNSKGV 934
Query: 930 LCQLSRCL 937
+ L+ L
Sbjct: 935 VLSLNDLL 942
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.134 0.368 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 943 831 0.00080 122 3 11 22 0.41 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 1
No. of states in DFA: 614 (65 KB)
Total size of DFA: 331 KB (2168 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 67.07u 0.22s 67.29t Elapsed: 00:00:03
Total cpu time: 67.07u 0.22s 67.29t Elapsed: 00:00:03
Start: Sat May 11 09:59:10 2013 End: Sat May 11 09:59:13 2013