Your job contains 1 sequence.
>002280
MGRSGRKKEKHGKRGEPSLADSNEGSAARTRPFSFDEIMIRRKTKNLSENIKEDAMDVSN
IPGDCTIENVSDDHKSGRHHGHKKSPGVDVHTSEEYVKVGSGKKEDNALTKNVDSSRQRD
GENRDLETKLKEDYVAKSNHRRTLKSEIRLKDRSPGNEKDRGNRGSDTKLKADVTKETSS
KPNVKSEKLIPSQGRSHNQSIVDSRDEATKKHSRDLTGKDRHADKSGEKSERESKRKHRN
RDDEKNRDKSAAKKVDLGKGHDLKVSERKEKKESPKSRHGNSRLKRRRSRSREREDRNRR
SLSLSPRAQKRTSYYDREHEGLPSHSTKISSGRQHSDIDSSRVTGNGLSGHYRRHDGSTS
GLGGYSPRKRRTEAAAKTPSPINRSPEKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHE
MVSSDPVTSTTQKPLAGISVSASLAKLNVSMDSVQLTQSNRPMRRLCVENLPLSASEKAL
MEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSIL
KIKRPKEFVEVAIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHEEPCAFIEYVDQ
LVTPKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPKHALPLLKKPTEVLKL
KNVFNPEGFSSLSELEVEEVLEDVRLECARFGSVKSVNVVKYGDSNISTIQACEGNENTA
SAGVGQNLTNDETNEKGERLEEVTDHKSIKNNELEILNDSKEVMEAGEVNNVKDNRPASG
TMGDEPSQLCELDTDMAVEYQARDSTSEIVSQGVPTQVNTLKDSPCAHDDKVTCNIQLEH
MSEENKSSAKEDLNLEEVNGNSEAFTGASNEMGMQSSAVENGDNENQDPNQGHIFEPGCV
FVEYMRAEASCMAAHSLHRRLFDDRIVAVEYIPLNLYRARFSK
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 002280
(943 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:1005716652 - symbol:AT2G33435 species:3702 "Ar... 551 3.1e-60 2
WB|WBGene00006697 - symbol:uaf-1 species:6239 "Caenorhabd... 167 1.1e-24 5
FB|FBgn0005411 - symbol:U2af50 "U2 small nuclear riboprot... 155 9.1e-24 5
ZFIN|ZDB-GENE-050706-131 - symbol:u2af2a "U2 small nuclea... 158 5.3e-23 4
ZFIN|ZDB-GENE-040426-1881 - symbol:u2af2b "U2 small nucle... 161 2.7e-22 4
UNIPROTKB|E2R0G3 - symbol:U2AF2 "Uncharacterized protein"... 161 3.8e-21 3
TAIR|locus:2206001 - symbol:AT1G60900 species:3702 "Arabi... 133 6.5e-21 4
UNIPROTKB|P26368 - symbol:U2AF2 "Splicing factor U2AF 65 ... 161 1.7e-20 3
MGI|MGI:98886 - symbol:U2af2 "U2 small nuclear ribonucleo... 161 1.7e-20 3
RGD|1597319 - symbol:LOC690372 "similar to U2 (RNU2) smal... 161 1.7e-20 3
UNIPROTKB|Q24JZ8 - symbol:U2AF2 "Uncharacterized protein"... 161 2.7e-20 3
DICTYBASE|DDB_G0286395 - symbol:u2af2 "U2 snRNP auxiliary... 157 4.1e-20 5
FB|FBgn0034834 - symbol:LS2 "Large Subunit 2" species:722... 150 4.4e-19 4
TAIR|locus:2115280 - symbol:ATU2AF65A species:3702 "Arabi... 149 4.4e-18 4
UNIPROTKB|K7ENG2 - symbol:U2AF2 "Splicing factor U2AF 65 ... 158 4.5e-17 3
ASPGD|ASPL0000008688 - symbol:AN6681 species:162425 "Emer... 138 3.5e-14 4
GENEDB_PFALCIPARUM|PF14_0656 - symbol:PF14_0656 "U2 snRNP... 133 1.4e-10 3
UNIPROTKB|Q8IKE9 - symbol:PF14_0656 "U2 snRNP auxiliary f... 133 1.4e-10 3
TAIR|locus:2098443 - symbol:AT3G28770 "AT3G28770" species... 137 4.2e-08 2
DICTYBASE|DDB_G0293562 - symbol:DDB_G0293562 species:4468... 121 2.8e-07 2
UNIPROTKB|E2QVN0 - symbol:ANKRD12 "Uncharacterized protei... 135 3.5e-07 3
DICTYBASE|DDB_G0288285 - symbol:mybX "myb domain-containi... 109 7.9e-07 2
DICTYBASE|DDB_G0283687 - symbol:DDB_G0283687 "RNA-binding... 100 9.6e-07 4
TAIR|locus:2137544 - symbol:AT4G37820 "AT4G37820" species... 148 9.9e-07 1
WB|WBGene00018926 - symbol:F56A11.6 species:6239 "Caenorh... 146 1.1e-06 1
FB|FBgn0037707 - symbol:RnpS1 "RNA-binding protein S1" sp... 97 2.8e-06 2
UNIPROTKB|F1NJ03 - symbol:SRSF4 "Uncharacterized protein"... 142 3.2e-06 1
RGD|1304968 - symbol:Rsrc1 "arginine/serine-rich coiled-c... 106 7.0e-06 2
FB|FBgn0031883 - symbol:CG11266 species:7227 "Drosophila ... 83 7.3e-06 4
ZFIN|ZDB-GENE-031112-4 - symbol:stm "starmaker" species:7... 128 7.9e-06 2
TAIR|locus:504955937 - symbol:AT2G22795 "AT2G22795" speci... 130 1.2e-05 2
GENEDB_PFALCIPARUM|MAL13P1.120 - symbol:MAL13P1.120 "spli... 110 1.3e-05 4
UNIPROTKB|Q8IE99 - symbol:MAL13P1.120 "Splicing factor, p... 110 1.3e-05 4
DICTYBASE|DDB_G0268132 - symbol:DDB_G0268132 "SET domain-... 111 1.5e-05 2
WB|WBGene00018119 - symbol:F36H12.3 species:6239 "Caenorh... 132 2.4e-05 1
DICTYBASE|DDB_G0270880 - symbol:gflC "PHD zinc finger-con... 115 3.0e-05 4
GENEDB_PFALCIPARUM|PFB0680w - symbol:PFB0680w "hypothetic... 125 3.1e-05 2
UNIPROTKB|O96229 - symbol:RON6 "Rhoptry neck protein 6" s... 125 3.1e-05 2
TAIR|locus:2076121 - symbol:AT3G23900 species:3702 "Arabi... 127 3.3e-05 2
DICTYBASE|DDB_G0287951 - symbol:DDB_G0287951 "unknown" sp... 119 4.0e-05 3
GENEDB_PFALCIPARUM|PF14_0404 - symbol:PF14_0404 "hypothet... 105 4.3e-05 2
UNIPROTKB|Q8IL45 - symbol:TREP "TRAP-related protein" spe... 105 4.3e-05 2
ZFIN|ZDB-GENE-040426-1146 - symbol:traf3ip1 "TNF receptor... 116 4.7e-05 3
UNIPROTKB|H3BMM9 - symbol:RNPS1 "RNA-binding protein with... 89 5.8e-05 2
UNIPROTKB|E1BDN8 - symbol:E1BDN8 "Uncharacterized protein... 131 6.7e-05 1
UNIPROTKB|Q08170 - symbol:SRSF4 "Serine/arginine-rich spl... 123 6.8e-05 2
UNIPROTKB|H3BTC0 - symbol:RNPS1 "RNA-binding protein with... 89 7.2e-05 2
UNIPROTKB|A6QR16 - symbol:RNPS1 "RNA-binding protein with... 89 7.4e-05 2
UNIPROTKB|F6XEW2 - symbol:RNPS1 "Uncharacterized protein"... 89 7.4e-05 2
UNIPROTKB|Q15287 - symbol:RNPS1 "RNA-binding protein with... 89 7.4e-05 2
MGI|MGI:97960 - symbol:Rnps1 "ribonucleic acid binding pr... 89 7.4e-05 2
RGD|1307522 - symbol:Rnps1 "ribonucleic acid binding prot... 89 7.4e-05 2
UNIPROTKB|Q6AYK1 - symbol:Rnps1 "RNA-binding protein with... 89 7.4e-05 2
ZFIN|ZDB-GENE-070912-117 - symbol:arhgap30 "Rho GTPase ac... 97 9.1e-05 2
UNIPROTKB|Q8WXA9 - symbol:SREK1 "Splicing regulatory glut... 132 9.5e-05 2
DICTYBASE|DDB_G0268640 - symbol:DDB_G0268640 "unknown" sp... 99 9.7e-05 2
TAIR|locus:2037863 - symbol:MBD10 "methyl-CPG-binding dom... 114 0.00010 2
DICTYBASE|DDB_G0285403 - symbol:DDB_G0285403 "RNA-binding... 120 0.00010 3
TAIR|locus:2178198 - symbol:AT5G09880 species:3702 "Arabi... 89 0.00011 3
RGD|620315 - symbol:Ppig "peptidylprolyl isomerase G" spe... 131 0.00011 1
UNIPROTKB|O55035 - symbol:Ppig "Peptidyl-prolyl cis-trans... 131 0.00011 1
DICTYBASE|DDB_G0268098 - symbol:nop58 "nucleolar protein ... 130 0.00012 1
UNIPROTKB|E2R749 - symbol:SREK1 "Uncharacterized protein"... 131 0.00012 2
ZFIN|ZDB-GENE-060503-229 - symbol:fam133b "family with se... 123 0.00013 1
POMBASE|SPBC146.07 - symbol:prp2 "U2AF large subunit (U2A... 95 0.00013 4
UNIPROTKB|E1BV45 - symbol:RNPS1 "Uncharacterized protein"... 89 0.00014 2
ZFIN|ZDB-GENE-030131-5228 - symbol:rnps1 "RNA binding pro... 92 0.00014 2
UNIPROTKB|Q2T9Y0 - symbol:RSRC1 "Serine/Arginine-related ... 103 0.00016 2
ZFIN|ZDB-GENE-091204-67 - symbol:si:dkey-33i22.3 "si:dkey... 114 0.00016 2
TAIR|locus:2178451 - symbol:AT5G53440 "AT5G53440" species... 118 0.00017 4
UNIPROTKB|J9P0H2 - symbol:SREK1 "Uncharacterized protein"... 131 0.00022 2
DICTYBASE|DDB_G0276577 - symbol:fray2 "FRAY subfamily pro... 128 0.00024 2
WB|WBGene00006961 - symbol:xnp-1 species:6239 "Caenorhabd... 128 0.00028 2
GENEDB_PFALCIPARUM|PF10_0217 - symbol:PF10_0217 "pre-mRNA... 108 0.00029 2
UNIPROTKB|Q8IJI0 - symbol:PF10_0217 "Pre-mRNA splicing fa... 108 0.00029 2
TAIR|locus:2132358 - symbol:AT4G02720 "AT4G02720" species... 108 0.00030 2
UNIPROTKB|E7ETC0 - symbol:TIAL1 "Nucleolysin TIAR" specie... 101 0.00031 1
GENEDB_PFALCIPARUM|PF14_0201 - symbol:PF14_0201 "surface ... 128 0.00033 1
UNIPROTKB|Q8ILP3 - symbol:Pf113 "Surface protein, Pf113" ... 128 0.00033 1
UNIPROTKB|Q6UB98 - symbol:ANKRD12 "Ankyrin repeat domain-... 129 0.00035 3
TAIR|locus:2027513 - symbol:AT1G56660 "AT1G56660" species... 124 0.00036 2
GENEDB_PFALCIPARUM|PF13_0191 - symbol:PF13_0191 "hypothet... 89 0.00038 2
UNIPROTKB|Q8IDY5 - symbol:PF13_0191 "Uncharacterized prot... 89 0.00038 2
UNIPROTKB|A8E658 - symbol:PPIG "Uncharacterized protein" ... 126 0.00039 1
FB|FBgn0039215 - symbol:CG6695 species:7227 "Drosophila m... 127 0.00041 1
DICTYBASE|DDB_G0287625 - symbol:DDB_G0287625 species:4468... 96 0.00042 2
ZFIN|ZDB-GENE-081015-2 - symbol:rpgrb "retinitis pigmento... 94 0.00046 2
GENEDB_PFALCIPARUM|PFL0625c - symbol:PFL0625c "eukaryotic... 116 0.00049 2
UNIPROTKB|Q8I5S6 - symbol:PFL0625c "Eukaryotic translatio... 116 0.00049 2
UNIPROTKB|E1C591 - symbol:PPIG "Uncharacterized protein" ... 125 0.00050 1
UNIPROTKB|I3LC61 - symbol:CYLC2 "Uncharacterized protein"... 121 0.00051 1
UNIPROTKB|Q14093 - symbol:CYLC2 "Cylicin-2" species:9606 ... 120 0.00054 1
WB|WBGene00016360 - symbol:C33G8.2 species:6239 "Caenorha... 127 0.00057 2
WB|WBGene00021913 - symbol:cec-8 species:6239 "Caenorhabd... 123 0.00059 2
UNIPROTKB|F1SSA8 - symbol:CYLC2 "Uncharacterized protein"... 120 0.00059 1
DICTYBASE|DDB_G0279317 - symbol:DDB_G0279317 "unknown" sp... 112 0.00061 2
UNIPROTKB|J9NUC9 - symbol:HMGN5 "Uncharacterized protein"... 118 0.00061 1
UNIPROTKB|B5DE93 - symbol:cdk12 "Cyclin-dependent kinase ... 117 0.00062 2
RGD|1587653 - symbol:LOC688526 "similar to ribonucleic ac... 75 0.00062 3
CGD|CAL0003874 - symbol:PGA55 species:5476 "Candida albic... 127 0.00065 1
WARNING: Descriptions of 21 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:1005716652 [details] [associations]
symbol:AT2G33435 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 EMBL:CP002685
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 IPI:IPI00541152
RefSeq:NP_850209.1 UniGene:At.37925 ProteinModelPortal:F4IVU7
SMR:F4IVU7 PRIDE:F4IVU7 EnsemblPlants:AT2G33435.1 GeneID:817908
KEGG:ath:AT2G33435 OMA:KEDHVGA Uniprot:F4IVU7
Length = 979
Score = 551 (199.0 bits), Expect = 3.1e-60, Sum P(2) = 3.1e-60
Identities = 122/251 (48%), Positives = 158/251 (62%)
Query: 306 PRAQKRTSYYDREHEGLPSHSTKISSGRQHSDIDSSRVTGNGLSGHYRRHDGSTSGLGGY 365
PRA+K TS + R HE + K SG+ H + + +VT +S RR+ S S LGGY
Sbjct: 720 PRAEKATSRHKRNHEERSENVVKDRSGKHHCNDNEDKVTST-VSNKSRRYSASKSELGGY 778
Query: 366 SPRKRRTEAAAKTPSPINRSPEKKSAKWDVAPVETYSVPSN-VHTSNQAASSNAHEMVSS 424
SPRKRR +A+ K SP N S EKKSAKW +A T + S+ V + QAA+ A+ +S
Sbjct: 779 SPRKRREQASTKAASPPNLSSEKKSAKWGLAATVTAGMFSDSVFSGLQAATQTAYPTISE 838
Query: 425 DPVTSTTQKPLAGISVSASL--AKLNVSMDSVQLTQSNRPMRRLCVENLPLSASEKALME 482
+ T KPL + A+ S DSVQLT+S R MRRL EN+P SASEK+L+E
Sbjct: 839 --ASLTLLKPLMVMDAPFRTPPARQTTSFDSVQLTESTRRMRRLYAENVPDSASEKSLIE 896
Query: 483 FLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKI 542
N ++LSSG H+ GS PCI C+I +EK QA VEFLT +DASAAL DGCSF+GS LKI
Sbjct: 897 CFNGYMLSSGSNHIKGSEPCISCIINKEKSQALVEFLTPQDASAALSLDGCSFAGSNLKI 956
Query: 543 KRPKEFVEVAI 553
+RPK++V +
Sbjct: 957 RRPKDYVRTTV 967
Score = 138 (53.6 bits), Expect = 3.1e-60, Sum P(2) = 3.1e-60
Identities = 51/176 (28%), Positives = 83/176 (47%)
Query: 94 EEYVKVGSGKKEDNALTKNVDSSRQRDGENRDLETKLKEDYVAKSNHRRTLKSEIRLKDR 153
EE VK S KKE+ + SSR+ EN D K K+D + SN +R + E +
Sbjct: 515 EERVKDSSRKKEEA-----ISSSRE---ENLD---KQKKDE-STSNRKRKAEGECSTAET 562
Query: 154 SPGNEKDRGNRGSDTKLKADVTKETSSKPNVKSEKLIPS---QGR---SHNQSIVDSRDE 207
E + RG + ++ +E K +K E L + +G + +++ D
Sbjct: 563 ESIEEHSKDRRGKKEETNSNCREERRDK-KMKKEDLASNRKIEGEIPTTETKTMTDRDGL 621
Query: 208 ATKKHSRDLTGKDRHADKSGEKSERESKRKHRNRDDEKNRDKSAAKKVDLGKGHDL 263
+KK R L D D+S K + KRK++N + +KNR+ + +K+ D GK H +
Sbjct: 622 CSKKRLRSLVVADVPRDESSIKPDNGDKRKNQNGNHKKNREINMSKRHDPGKVHSV 677
Score = 120 (47.3 bits), Expect = 2.4e-58, Sum P(2) = 2.4e-58
Identities = 63/253 (24%), Positives = 104/253 (41%)
Query: 22 SNEGSAARTRPFSFDEIMIRRKTKNLSENIKEDAMDVSNIPGDCTIENVXXXXXXXXXXX 81
+ EGSAARTRP S +EI +RRK K EN+KE+ + + + G +E
Sbjct: 19 NEEGSAARTRPTSVEEIRLRRKRKESLENVKEETVGAAQLLGYDLVEKASDYHESKNLRR 78
Query: 82 XXXXPGVDVHTSEEYVKVGSGKKEDNALTKNVDSSRQRDGENRDLETKLKEDYVAKSNHR 141
V+ + +E + ++E D +++L K+ + + ++ +
Sbjct: 79 EEH---VEDSSRKEKEAISRCREEKIEKPMKEDPVGAAQLPDKNLVEKVLDCHESEKGYD 135
Query: 142 RT--LKSEIRLKDRSPGNEKD-RGNRGS--DTKLKADVTKETSSKPNVKSEKLIPS---Q 193
R+ L E + D S E+ +R D +K D+ N EK +P
Sbjct: 136 RSEKLSHEELVMDSSRKKEEAISSSREEKLDKPIKDDLVGTAQLLGNDLVEK-VPEYHVS 194
Query: 194 GRSHNQSIVDSRDEATKKHSR---DLTGKDRHADKSGEKSERESKRKHRNRDD-EKNRDK 249
+ H+ S R+E K R D+T R D++ K + + R D EK D
Sbjct: 195 EKEHDGSKNVRREERVKDSLRKKEDITSSSR--DETPMKEDHVGAAQLRGNDIVEKVSDN 252
Query: 250 SAAKKVDLGKGHD 262
A++K GHD
Sbjct: 253 HASEK-----GHD 260
Score = 109 (43.4 bits), Expect = 3.5e-57, Sum P(2) = 3.5e-57
Identities = 39/158 (24%), Positives = 77/158 (48%)
Query: 108 ALTKNVDS-SRQRDGENRDLETKLKEDYVAKSNHRRTLKSEIRLKDRSPGNEK----DRG 162
A T++++ S+ R G+ + + +E+ K + L S +++ P E DR
Sbjct: 560 AETESIEEHSKDRRGKKEETNSNCREERRDKKMKKEDLASNRKIEGEIPTTETKTMTDRD 619
Query: 163 NRGSDTKLK----ADVTKETSS-KPNVKSEKLIPSQGRSHNQSI-VDSRDEATKKHSRDL 216
S +L+ ADV ++ SS KP+ ++ + N+ I + R + K HS ++
Sbjct: 620 GLCSKKRLRSLVVADVPRDESSIKPDNGDKRKNQNGNHKKNREINMSKRHDPGKVHSVEV 679
Query: 217 TGK--DRHADKSGEKSERESKRKHRNRDDEKNRDKSAA 252
+ + R KS ++ RE +R+ R+RD ++R K ++
Sbjct: 680 SERWERREQPKSRQRDLREKRRRSRSRDHGQDRQKRSS 717
Score = 91 (37.1 bits), Expect = 2.7e-55, Sum P(2) = 2.7e-55
Identities = 47/170 (27%), Positives = 76/170 (44%)
Query: 94 EEYVKVGSGKKEDNALTKNVDSSRQRDGENRDLETKLKEDYVAKSNHRRTLKSEIRLKDR 153
EE+VK S KKED + + SR+ D + L D V K + SE R DR
Sbjct: 268 EEHVKDSSRKKEDYISSFREEKSRKEDHVGAAM--LLGHDIVDKFSDYHA--SEKR-HDR 322
Query: 154 SPGNEKDRGNRGSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQSIVDSRDE--ATKK 211
S +D + S K K D T ++ + ++K + +Q H+ IV+ + A++K
Sbjct: 323 SKKVRRDEHVKESSRK-KEDATSGSTEEKSMKEDHAGAAQLLGHD--IVEKVSDYHASEK 379
Query: 212 -HSRD--LTGKDRHADKSGEKSERESKRKHRNRDDEKNRDKSAAKKVDLG 258
H R + ++R D S +K + S + D+ D A ++ LG
Sbjct: 380 GHDRSTKVRREERVKDSSRKKEDATSGSREERVDNSTKEDPVGAAQL-LG 428
Score = 87 (35.7 bits), Expect = 7.2e-55, Sum P(2) = 7.2e-55
Identities = 44/174 (25%), Positives = 76/174 (43%)
Query: 99 VGSGKKEDNALTKNVD----SSRQRDG-ENRDLETKLKEDYVAKSNHRRTLKSEIRLKDR 153
VG+ + N L + V S ++ DG +N E ++K+ K + + + E +K+
Sbjct: 174 VGTAQLLGNDLVEKVPEYHVSEKEHDGSKNVRREERVKDSLRKKEDITSSSRDETPMKED 233
Query: 154 SPGNEKDRGNRGSDTKLKADVTKETSSKPN-VKSEKLIPSQGRSHNQSIVDSRDEATKK- 211
G + RGN + +++ K N V+ E+ + R I R+E ++K
Sbjct: 234 HVGAAQLRGNDIVEKVSDNHASEKGHDKSNKVRREEHVKDSSRKKEDYISSFREEKSRKE 293
Query: 212 -H--SRDLTGKDRHADKSGE--KSERESKRKHRNRDDEKNRDKSAAKKVDLGKG 260
H + L G D DK + SE+ R + R DE ++ S+ KK D G
Sbjct: 294 DHVGAAMLLGHDI-VDKFSDYHASEKRHDRSKKVRRDEHVKE-SSRKKEDATSG 345
Score = 80 (33.2 bits), Expect = 3.9e-54, Sum P(2) = 3.9e-54
Identities = 35/168 (20%), Positives = 66/168 (39%)
Query: 89 DVHTSEEYVKVGSGKKEDNALTKNVDSSRQRDGENRDLETKLKEDYVAKS----NHRRTL 144
D HTSE + + + + N + +R E +KED+V + N +
Sbjct: 437 DYHTSERGHERSKKVRREERVKDNSRKKEEAISSSRG-EKPIKEDHVGAAQLLGNDLVEM 495
Query: 145 KSEIRLKDRSPGNEK--DRGNRGSDTKLKADVTKETSSKPNV---KSEKLIPSQGRSHNQ 199
S+ ++ K R R D+ K + +S + N+ K ++ ++ R
Sbjct: 496 VSDYHETEKGYDRSKKLSREERVKDSSRKKEEAISSSREENLDKQKKDESTSNRKRKAEG 555
Query: 200 SIVDSRDEATKKHSRDLTGKDRHADKSGEKSERESKRKHRNRDDEKNR 247
+ E+ ++HS+D GK + + + R+ K K D NR
Sbjct: 556 ECSTAETESIEEHSKDRRGKKEETNSNCREERRDKKMK--KEDLASNR 601
Score = 78 (32.5 bits), Expect = 6.4e-54, Sum P(2) = 6.4e-54
Identities = 38/165 (23%), Positives = 63/165 (38%)
Query: 111 KNVDSSRQRDGENRDLETKLKEDYVAKSNHRRTLKSEIRLKDRSPGNEKDRGNRGSDTKL 170
K D S + E +++ K++ S+ L I KD G + GN +
Sbjct: 132 KGYDRSEKLSHEELVMDSSRKKEEAISSSREEKLDKPI--KDDLVGTAQLLGNDLVEKVP 189
Query: 171 KADVT-KETSSKPNVKSEKLIPSQGRSHNQSIVDSRDEATKK--H-------SRDLTGK- 219
+ V+ KE NV+ E+ + R SRDE K H D+ K
Sbjct: 190 EYHVSEKEHDGSKNVRREERVKDSLRKKEDITSSSRDETPMKEDHVGAAQLRGNDIVEKV 249
Query: 220 -DRHADKSG-EKSERESKRKHRNRDDEKNRDKSAAKKVDLGKGHD 262
D HA + G +KS + + +H K D ++ + + + D
Sbjct: 250 SDNHASEKGHDKSNKVRREEHVKDSSRKKEDYISSFREEKSRKED 294
Score = 69 (29.3 bits), Expect = 5.7e-53, Sum P(2) = 5.7e-53
Identities = 33/165 (20%), Positives = 75/165 (45%)
Query: 89 DVHTSEEYVKVGSGKKEDNALTKNVDSSRQRDGENRDLETK-LKEDYVAKSNHRRTLKSE 147
D H SE+ + D + ++ S ++ D + E K +KED+ + + L +
Sbjct: 312 DYHASEKRHDRSKKVRRDEHVKES--SRKKEDATSGSTEEKSMKEDHAGAA---QLLGHD 366
Query: 148 IRLKDRSPGNEKDRGNRGSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQSIVDSRDE 207
I ++ S + ++G+ S TK++ + + SS+ K + S+ + S +
Sbjct: 367 I-VEKVSDYHASEKGHDRS-TKVRREERVKDSSRK--KEDATSGSREERVDNSTKEDPVG 422
Query: 208 ATKKHSRDLTGK--DRHADKSGEKSERESKRKHRNRDDEKNRDKS 250
A + D K D H + G + ++ +R+ R +D+ + ++++
Sbjct: 423 AAQLLGNDFVEKVSDYHTSERGHERSKKVRREERVKDNSRKKEEA 467
Score = 68 (29.0 bits), Expect = 7.2e-53, Sum P(2) = 7.2e-53
Identities = 41/148 (27%), Positives = 66/148 (44%)
Query: 122 ENRD-LETKLKEDYVAKSNHRRTLKSEIRLKDR---SPGNEKDRGNRGSDTKLKADVTKE 177
ENRD ET + E+ A + R T EIRL+ + S N K+ G+ L D+ ++
Sbjct: 9 ENRDGHETLVNEEGSA-ARTRPTSVEEIRLRRKRKESLENVKEE-TVGAAQLLGYDLVEK 66
Query: 178 TSS---KPNVKSEKLIPSQGRSHNQSIVDSRDEATKKHSR-DLTGKDRHADKS-GEK--- 229
S N++ E+ + R ++I R+E +K + D G + DK+ EK
Sbjct: 67 ASDYHESKNLRREEHVEDSSRKEKEAISRCREEKIEKPMKEDPVGAAQLPDKNLVEKVLD 126
Query: 230 ---SERESKRKHRNRDDEKNRDKSAAKK 254
SE+ R + +E D S K+
Sbjct: 127 CHESEKGYDRSEKLSHEELVMDSSRKKE 154
Score = 66 (28.3 bits), Expect = 1.2e-52, Sum P(2) = 1.2e-52
Identities = 39/181 (21%), Positives = 82/181 (45%)
Query: 89 DVHTSEE-YVKVGSGKKEDNALTKNVDSSRQRD----GENRD-LETKLKEDYVAKSNHRR 142
D H SE+ + + ++E+ DSSR+++ G + ++ KED V + +
Sbjct: 373 DYHASEKGHDRSTKVRREERVK----DSSRKKEDATSGSREERVDNSTKEDPVGAA---Q 425
Query: 143 TLKSEIRLKDRSPGNEKDRGNRGSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQSIV 202
L ++ ++ S + +RG+ S + + K+ S K K E + S+G + I
Sbjct: 426 LLGNDF-VEKVSDYHTSERGHERSKKVRREERVKDNSRK---KEEAISSSRGE---KPIK 478
Query: 203 DSRDEATKKHSRDLTG--KDRHADKSGEKSERESKRKHRNRDDEKNRDK--SAAKKVDLG 258
+ A + DL D H + G ++ R+ R +D + +++ S++++ +L
Sbjct: 479 EDHVGAAQLLGNDLVEMVSDYHETEKGYDRSKKLSREERVKDSSRKKEEAISSSREENLD 538
Query: 259 K 259
K
Sbjct: 539 K 539
Score = 64 (27.6 bits), Expect = 1.9e-52, Sum P(2) = 1.9e-52
Identities = 38/158 (24%), Positives = 72/158 (45%)
Query: 107 NALTKNVDSSRQ-RDGENRDLETKLKEDYVAKSNHRRTLKSEIRLKDRSPGNEKDRGNRG 165
+A K D S++ R E+ ++ KED + S +++K + + G+ D +
Sbjct: 314 HASEKRHDRSKKVRRDEHVKESSRKKEDATSGSTEEKSMKEDHAGAAQLLGH--DIVEKV 371
Query: 166 SDTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQSIVDSRDE----ATKKH---SRDLTG 218
SD ++ + S+K V+ E+ + R + SR+E +TK+ + L G
Sbjct: 372 SDYHA-SEKGHDRSTK--VRREERVKDSSRKKEDATSGSREERVDNSTKEDPVGAAQLLG 428
Query: 219 KDRHADKSGE--KSERESKRKHRNRDDEKNRDKSAAKK 254
D +K + SER +R + R +E+ +D S K+
Sbjct: 429 ND-FVEKVSDYHTSERGHERSKKVRREERVKDNSRKKE 465
>WB|WBGene00006697 [details] [associations]
symbol:uaf-1 species:6239 "Caenorhabditis elegans"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0040020 "regulation of meiosis" evidence=IMP] [GO:0040022
"feminization of hermaphroditic germ-line" evidence=IMP]
[GO:0007281 "germ cell development" evidence=IMP] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=ISS] [GO:0009790 "embryo
development" evidence=IMP] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0030628 "pre-mRNA 3'-splice site binding"
evidence=IDA] [GO:0048589 "developmental growth" evidence=IMP]
[GO:0010172 "embryonic body morphogenesis" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR000504
InterPro:IPR006529 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0009792 GO:GO:0002119 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0005681 GO:GO:0042127 GO:GO:0040035
GO:GO:0007281 GO:GO:0048589 GO:GO:0010172 GO:GO:0000398
GO:GO:0040020 GO:GO:0040022 EMBL:FO080242
GeneTree:ENSGT00690000102089 GO:GO:0030628 eggNOG:NOG298004
HOGENOM:HOG000180745 KO:K12837 TIGRFAMs:TIGR01642 EMBL:U79157
RefSeq:NP_001022967.1 RefSeq:NP_001022969.1 RefSeq:NP_497326.2
UniGene:Cel.18058 ProteinModelPortal:P90978 SMR:P90978
IntAct:P90978 MINT:MINT-1062639 STRING:P90978 PaxDb:P90978
PRIDE:P90978 EnsemblMetazoa:Y92C3B.2a GeneID:175270
KEGG:cel:CELE_Y92C3B.2 UCSC:Y92C3B.2b.1 CTD:175270
WormBase:Y92C3B.2a WormBase:Y92C3B.2b WormBase:Y92C3B.2c
InParanoid:P90978 OMA:TDGSTRA NextBio:887470 ArrayExpress:P90978
Uniprot:P90978
Length = 496
Score = 167 (63.8 bits), Expect = 1.1e-24, Sum P(5) = 1.1e-24
Identities = 48/157 (30%), Positives = 79/157 (50%)
Query: 553 IFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVN-EDHEEPCAFIEYVDQLVTPKAIAGLN 611
IFIGG+ L+ V E++C+FGPLKA+ V+ + + + AF EY+D +T +AIAGLN
Sbjct: 293 IFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQAIAGLN 352
Query: 612 GLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPKHALPLLK---KPTEVLKLKNVFNPEG 668
G+++G + L VQ N+ N P + L + + TE+L L N+ +
Sbjct: 353 GMQLGDKQLV-VQLACANQQRHNT-NLPNSASAIAGIDLSQGAGRATEILCLMNMVTEDE 410
Query: 669 FXXXXXXXXXXXXXXXXXXCARFGSVKSVNVVK-YGD 704
C+++G V+S+ + + Y D
Sbjct: 411 LKADDEYEEILEDVRDE--CSKYGIVRSLEIPRPYED 445
Score = 154 (59.3 bits), Expect = 1.1e-24, Sum P(5) = 1.1e-24
Identities = 29/85 (34%), Positives = 52/85 (61%)
Query: 464 RRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAED 523
RRL V N+P +E+A+++F N + G+ G+ P + C I +K AF+EF + ++
Sbjct: 184 RRLYVGNIPFGCNEEAMLDFFNQQMHLCGLAQAPGN-PILLCQINLDKNFAFIEFRSIDE 242
Query: 524 ASAALCCDGCSFSGSILKIKRPKEF 548
+A + DG +F G LK++RP+++
Sbjct: 243 TTAGMAFDGINFMGQQLKVRRPRDY 267
Score = 60 (26.2 bits), Expect = 1.1e-24, Sum P(5) = 1.1e-24
Identities = 29/108 (26%), Positives = 40/108 (37%)
Query: 345 GNGLSGHYRRHDGSTSGLGGYSPRKRRTEAAAKT---PSPINRSPEKKSAKWDVAPVETY 401
G G R + G G PR+R + A++ P P KK WDV P
Sbjct: 88 GGGDRDRSRSRERRRGGGGRDEPRRRGGDDEARSRREPEPQKPREPKKYRFWDVPPTGFE 147
Query: 402 SVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSASLAKLNV 449
+ + + QAA V V S P+ G SV+ +L V
Sbjct: 148 TTTPMEYKNMQAAGQ-----VPRGSVQSAV--PVVGPSVTCQSRRLYV 188
Score = 55 (24.4 bits), Expect = 1.1e-24, Sum P(5) = 1.1e-24
Identities = 17/73 (23%), Positives = 30/73 (41%)
Query: 177 ETSSKPNVKSEKLIPSQGRSHNQSIVDSRDEATKKHSRDLTGKDRHADKSGEKSERESKR 236
+ ++ P E L S G + D D +K SR R +S ++ ER
Sbjct: 31 QPTTGPLENEENLKSSTGGGGGE---DDNDRKKRKRSRSRDRDTRRRSRSRDRGERRGGG 87
Query: 237 KHRNRDDEKNRDK 249
+RD ++R++
Sbjct: 88 GGGDRDRSRSRER 100
Score = 52 (23.4 bits), Expect = 5.0e-22, Sum P(4) = 5.0e-22
Identities = 14/48 (29%), Positives = 23/48 (47%)
Query: 204 SRDEATKKHSRDLT-GKDRHADKSGEKSERESKRKHRN---RDDEKNR 247
SRD T++ SR G+ R G++ S+ + R RD+ + R
Sbjct: 66 SRDRDTRRRSRSRDRGERRGGGGGGDRDRSRSRERRRGGGGRDEPRRR 113
Score = 52 (23.4 bits), Expect = 5.0e-22, Sum P(4) = 5.0e-22
Identities = 21/89 (23%), Positives = 36/89 (40%)
Query: 100 GSGKKEDNALTKNVDSSRQRDGENRDLETKLKEDYVAKSNHRRTLKSEIRLKDRSPGNEK 159
G G ++DN D +++ +RD +T+ + + R R DRS E+
Sbjct: 49 GGGGEDDN------DRKKRKRSRSRDRDTRRRSRSRDRGERRGGGGGGDR--DRSRSRER 100
Query: 160 DRGNRGSDTKLKADVTKETSSKPNVKSEK 188
RG G D + E S+ + +K
Sbjct: 101 RRGGGGRDEPRRRGGDDEARSRREPEPQK 129
Score = 51 (23.0 bits), Expect = 1.1e-24, Sum P(5) = 1.1e-24
Identities = 15/44 (34%), Positives = 22/44 (50%)
Query: 898 GCVFVEYMRAEASCMAAHS-LHRRLFDDRIVAVEYIPLNLYRAR 940
G VFVE+ + + C A + L R F +R V Y ++ Y R
Sbjct: 452 GKVFVEFA-STSDCQRAQAALTGRKFANRTVVTSYYDVDKYHNR 494
>FB|FBgn0005411 [details] [associations]
symbol:U2af50 "U2 small nuclear riboprotein auxiliary factor
50" species:7227 "Drosophila melanogaster" [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;ISS;NAS;IMP] [GO:0005686 "U2
snRNP" evidence=TAS] [GO:0008187 "poly-pyrimidine tract binding"
evidence=NAS;IDA] [GO:0005681 "spliceosomal complex"
evidence=ISS;NAS] [GO:0000245 "spliceosomal complex assembly"
evidence=NAS] [GO:0046982 "protein heterodimerization activity"
evidence=NAS] [GO:0005634 "nucleus" evidence=IC;NAS] [GO:0003729
"mRNA binding" evidence=ISS] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0051168 "nuclear export" evidence=IMP]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=IMP] [GO:0007052 "mitotic spindle
organization" evidence=IMP] [GO:0071011 "precatalytic spliceosome"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008380 "RNA splicing" evidence=IMP] [GO:0003723 "RNA binding"
evidence=IMP] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR000504 InterPro:IPR006529 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0007052
GO:GO:0022008 GO:GO:0000166 EMBL:AE014298 GO:GO:0003729
Gene3D:3.30.70.330 GO:GO:0071011 GO:GO:0000398 GO:GO:0051168
GO:GO:0005686 GO:GO:0000381 GO:GO:0008187
GeneTree:ENSGT00690000102089 eggNOG:NOG298004 KO:K12837
TIGRFAMs:TIGR01642 EMBL:L23404 EMBL:AY069320 PIR:A48249
RefSeq:NP_001245710.1 RefSeq:NP_476891.1 UniGene:Dm.5430
ProteinModelPortal:Q24562 SMR:Q24562 DIP:DIP-23323N IntAct:Q24562
MINT:MINT-790159 STRING:Q24562 PaxDb:Q24562 PRIDE:Q24562
EnsemblMetazoa:FBtr0074234 EnsemblMetazoa:FBtr0307178 GeneID:32602
KEGG:dme:Dmel_CG9998 CTD:32602 FlyBase:FBgn0005411
InParanoid:Q24562 OrthoDB:EOG40CFZH PhylomeDB:Q24562
GenomeRNAi:32602 NextBio:779380 Bgee:Q24562 GermOnline:CG9998
Uniprot:Q24562
Length = 416
Score = 155 (59.6 bits), Expect = 9.1e-24, Sum P(5) = 9.1e-24
Identities = 32/88 (36%), Positives = 50/88 (56%)
Query: 461 RPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLT 520
R RRL V N+P +E+ +MEF N + G+ GS P + C I +K AF+EF +
Sbjct: 90 RQARRLYVGNIPFGVTEEEMMEFFNQQMHLVGLAQAAGS-PVLACQINLDKNFAFLEFRS 148
Query: 521 AEDASAALCCDGCSFSGSILKIKRPKEF 548
++ + A+ DG + G LKI+RP ++
Sbjct: 149 IDETTQAMAFDGINLKGQSLKIRRPHDY 176
Score = 149 (57.5 bits), Expect = 9.1e-24, Sum P(5) = 9.1e-24
Identities = 44/153 (28%), Positives = 73/153 (47%)
Query: 553 IFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCAFIEYVDQLVTPKAIAGL 610
IFIGG+ L+ V E++ +FG L+A++ + + AF EYVD +T ++IAGL
Sbjct: 209 IFIGGLPNYLNDDQVKELLLSFGKLRAFNLVKDAATGLSKGYAFCEYVDLSITDQSIAGL 268
Query: 611 NGLKVGGQVLTAVQAVLDGSIMDNSGNPP---FHGIPKHALPLLK-KPTEVLKLKNVFNP 666
NG+++G + L +A + N+ N +P + + PTEVL L N+ P
Sbjct: 269 NGMQLGDKKLIVQRASVGAKNAQNAANTTQSVMLQVPGLSNVVTSGPPTEVLCLLNMVTP 328
Query: 667 EGFXXXXXXXXXXXXXXXXXXCARFGSVKSVNV 699
+ C ++G V+SV +
Sbjct: 329 DELRDEEEYEDILEDIKEE--CTKYGVVRSVEI 359
Score = 67 (28.6 bits), Expect = 9.1e-24, Sum P(5) = 9.1e-24
Identities = 20/55 (36%), Positives = 27/55 (49%)
Query: 889 PNQGHIFEPGC--VFVEYMRAEASCMAAH-SLHRRLFDDRIVAVEYIPLNLYRAR 940
P +G + PGC VFVE+ + C A +L R F DR+V Y + Y R
Sbjct: 362 PIEG-VEVPGCGKVFVEF-NSVLDCQKAQQALTGRKFSDRVVVTSYFDPDKYHRR 414
Score = 53 (23.7 bits), Expect = 9.1e-24, Sum P(5) = 9.1e-24
Identities = 9/38 (23%), Positives = 19/38 (50%)
Query: 220 DRHADKSGEKSERESKRKHRNRDDEKNRDKSAAKKVDL 257
DR D+ + S+ +HR R ++ +++ +K L
Sbjct: 5 DRERDRERRRHRSRSRDRHRERSRDRRHHRNSRRKPSL 42
Score = 49 (22.3 bits), Expect = 9.1e-24, Sum P(5) = 9.1e-24
Identities = 16/65 (24%), Positives = 27/65 (41%)
Query: 385 SPEKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSASL 444
S K S WDV P + + + QA+ +V P T+ P+ G +++
Sbjct: 36 SRRKPSLYWDVPPPGFEHITPMQYKAMQASGQIPASVVPDTPQTAV---PVVGSTITRQA 92
Query: 445 AKLNV 449
+L V
Sbjct: 93 RRLYV 97
Score = 49 (22.3 bits), Expect = 2.3e-23, Sum P(5) = 2.3e-23
Identities = 13/35 (37%), Positives = 21/35 (60%)
Query: 205 RDEATKKH-SRDLTGKDRHADKSGEKSE-RESKRK 237
RD ++H SR +DRH ++S ++ R S+RK
Sbjct: 8 RDRERRRHRSRS---RDRHRERSRDRRHHRNSRRK 39
Score = 47 (21.6 bits), Expect = 1.3e-13, Sum P(5) = 1.3e-13
Identities = 27/102 (26%), Positives = 42/102 (41%)
Query: 693 SVKSVNVVKYGDSNISTIQACEGNENTASA------------GVGQNLTNDETNEKGERL 740
S+ +N ++ GD + +A G +N +A G+ +T+ E L
Sbjct: 264 SIAGLNGMQLGDKKLIVQRASVGAKNAQNAANTTQSVMLQVPGLSNVVTSGPPTEVLCLL 323
Query: 741 EEVTDHKSIKNNELE-ILNDSKE-VMEAGEVNNVKDNRPASG 780
VT + E E IL D KE + G V +V+ RP G
Sbjct: 324 NMVTPDELRDEEEYEDILEDIKEECTKYGVVRSVEIPRPIEG 365
Score = 37 (18.1 bits), Expect = 3.7e-22, Sum P(5) = 3.7e-22
Identities = 8/26 (30%), Positives = 15/26 (57%)
Query: 117 RQRDGENRDLETKLKEDYVAKSNHRR 142
R+RD E R ++ ++ + +S RR
Sbjct: 6 RERDRERRRHRSRSRDRHRERSRDRR 31
Score = 37 (18.1 bits), Expect = 1.2e-12, Sum P(5) = 1.2e-12
Identities = 16/54 (29%), Positives = 25/54 (46%)
Query: 793 DTDMAVEYQARDSTSEIVSQGVPTQVNTLKD--SPCAHDDKVTCNIQLEHMSEE 844
+T +V Q S +V+ G PT+V L + +P D+ LE + EE
Sbjct: 295 NTTQSVMLQV-PGLSNVVTSGPPTEVLCLLNMVTPDELRDEEEYEDILEDIKEE 347
>ZFIN|ZDB-GENE-050706-131 [details] [associations]
symbol:u2af2a "U2 small nuclear RNA auxiliary
factor 2a" species:7955 "Danio rerio" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0046660 "female sex
differentiation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR006529 InterPro:IPR010519 InterPro:IPR012677
Pfam:PF00076 Pfam:PF06495 PROSITE:PS50102 SMART:SM00360
ZFIN:ZDB-GENE-050706-131 GO:GO:0005634 GO:GO:0000166 GO:GO:0006397
Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0046660
GeneTree:ENSGT00690000102089 TIGRFAMs:TIGR01642 EMBL:CR848818
IPI:IPI00503978 Ensembl:ENSDART00000124875 Bgee:E7F8Y4
Uniprot:E7F8Y4
Length = 470
Score = 158 (60.7 bits), Expect = 5.3e-23, Sum P(4) = 5.3e-23
Identities = 53/174 (30%), Positives = 84/174 (48%)
Query: 383 NRSP--EKKSAK----WDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTST--TQKP 434
+RSP EKK K WDV P P H + A + P T+ T P
Sbjct: 69 SRSPHREKKKIKVKKYWDVPP------PGFEHITPM--QYKAMQAAGQIPATALLPTMTP 120
Query: 435 LAGISVSASLAKLNVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQ 494
G++V+ + V + Q+T R RRL V N+P +E+++M+F N + G+
Sbjct: 121 -EGLAVTPT----PVPVVGSQMT---RQARRLYVGNIPFGITEESMMDFFNAQMRLGGLT 172
Query: 495 HVHGSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEF 548
G+ P + I ++K AF+EF + ++ + A+ DG F G LKI+RP ++
Sbjct: 173 QAPGN-PVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDY 225
Score = 150 (57.9 bits), Expect = 5.3e-23, Sum P(4) = 5.3e-23
Identities = 46/156 (29%), Positives = 75/156 (48%)
Query: 553 IFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDH--EEPCAFIEYVDQLVTPKAIAGL 610
+FIGG+ L+ V E++ +FGPLKA++ + + AF EYVD ++ +AIAGL
Sbjct: 259 LFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDVNISDQAIAGL 318
Query: 611 NGLKVGGQVLTAVQAVLDGSIMDNSG---NPPFHGIPKHALPLLKK----PTEVLKLKNV 663
NG+++G + L +A + +G P +P + + PTEVL L N+
Sbjct: 319 NGMQLGDKKLLVQRASVGSKNTTLTGINQTPVTLQVPGLMNSSVNQMGGIPTEVLCLMNM 378
Query: 664 FNPEGFXXXXXXXXXXXXXXXXXXCARFGSVKSVNV 699
PE C+++G VKS+ +
Sbjct: 379 VAPEELLDDEEYEEIVEDVRDE--CSKYGQVKSIEI 412
Score = 65 (27.9 bits), Expect = 5.3e-23, Sum P(4) = 5.3e-23
Identities = 16/53 (30%), Positives = 30/53 (56%)
Query: 207 EATKKHSRDLTGKDRHADKSGEKS---ERESKRKHRNRDDEK--NRDKSAAKK 254
+ T+ D +++H +SG +S +R+ KR+ R+RD E+ +RD+ K
Sbjct: 10 QLTENKQADRDKENKHHRRSGSRSRSRDRDRKRRSRDRDRERRGSRDRHGDSK 62
Score = 61 (26.5 bits), Expect = 1.4e-22, Sum P(4) = 1.4e-22
Identities = 16/43 (37%), Positives = 22/43 (51%)
Query: 204 SRDEATKKHSRDLT-----GKDRHADKSGEKSERESKRKHRNR 241
SRD K+ SRD +DRH D S ++ R S+ HR +
Sbjct: 35 SRDRDRKRRSRDRDRERRGSRDRHGD-SKDRRHRRSRSPHREK 76
Score = 60 (26.2 bits), Expect = 5.3e-23, Sum P(4) = 5.3e-23
Identities = 15/43 (34%), Positives = 21/43 (48%)
Query: 898 GCVFVEYMRAEASCMAAHSLHRRLFDDRIVAVEYIPLNLYRAR 940
G +FVE+M S A L R F +R+V +Y + Y R
Sbjct: 425 GKIFVEFMSVFDSQKAMQGLTGRKFANRVVVTKYCDPDAYHRR 467
Score = 55 (24.4 bits), Expect = 2.0e-13, Sum P(4) = 2.0e-13
Identities = 21/83 (25%), Positives = 39/83 (46%)
Query: 693 SVKSVNVVKYGDSNISTIQACEGNENTASAGVGQN--------LTNDETNEKGERLEEVT 744
++ +N ++ GD + +A G++NT G+ Q L N N+ G EV
Sbjct: 314 AIAGLNGMQLGDKKLLVQRASVGSKNTTLTGINQTPVTLQVPGLMNSSVNQMGGIPTEVL 373
Query: 745 DHKSIKNNELEILNDSK--EVME 765
++ E E+L+D + E++E
Sbjct: 374 CLMNMVAPE-ELLDDEEYEEIVE 395
Score = 52 (23.4 bits), Expect = 1.1e-21, Sum P(4) = 1.1e-21
Identities = 15/38 (39%), Positives = 22/38 (57%)
Query: 214 RDLTGKDRHADKSGE-KSERESKRKHRNRD-DEKNRDK 249
R LT +++ AD+ E K R S + R+RD D K R +
Sbjct: 9 RQLT-ENKQADRDKENKHHRRSGSRSRSRDRDRKRRSR 45
Score = 52 (23.4 bits), Expect = 1.1e-21, Sum P(4) = 1.1e-21
Identities = 15/47 (31%), Positives = 24/47 (51%)
Query: 205 RDEATKKHSRDLTGKDRHADKSGEKSERESKRKHR-NRD---DEKNR 247
RD+ K H R + R D+ ++ R+ R+ R +RD D K+R
Sbjct: 19 RDKENKHHRRS-GSRSRSRDRDRKRRSRDRDRERRGSRDRHGDSKDR 64
Score = 49 (22.3 bits), Expect = 2.3e-21, Sum P(4) = 2.3e-21
Identities = 16/58 (27%), Positives = 26/58 (44%)
Query: 104 KEDNALTKNVDSSRQRDGENRDLETKLKEDYVAKSNHRRTLKSEIRLKDRSPGNEKDR 161
+ + +++ D R+R +RD E + D S RR +S RSP EK +
Sbjct: 27 RRSGSRSRSRDRDRKRRSRDRDRERRGSRDRHGDSKDRRHRRS------RSPHREKKK 78
Score = 48 (22.0 bits), Expect = 2.8e-21, Sum P(4) = 2.8e-21
Identities = 19/75 (25%), Positives = 30/75 (40%)
Query: 120 DGENRDLETKLKEDYVAKSNHRRTLKSEIRLKDRSP---GNEKDRGNRGSDTKL--KADV 174
D R L + D ++ H R S R +DR ++DR RGS + D
Sbjct: 5 DEFERQLTENKQADRDKENKHHRRSGSRSRSRDRDRKRRSRDRDRERRGSRDRHGDSKDR 64
Query: 175 TKETSSKPNVKSEKL 189
S P+ + +K+
Sbjct: 65 RHRRSRSPHREKKKI 79
Score = 46 (21.3 bits), Expect = 2.6e-10, Sum P(3) = 2.6e-10
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 594 FIEYVDQLVTPKAIAGLNGLKVGGQVL 620
F+E++ + KA+ GL G K +V+
Sbjct: 428 FVEFMSVFDSQKAMQGLTGRKFANRVV 454
Score = 45 (20.9 bits), Expect = 2.0e-12, Sum P(4) = 2.0e-12
Identities = 28/122 (22%), Positives = 50/122 (40%)
Query: 691 FGSVKSVNVVKYGDSNISTIQA-CEGNENTASAGVGQNLTNDETNEKGERLEEVTDHKSI 749
FG +K+ N+VK + +S A CE + S L + +K ++ +
Sbjct: 280 FGPLKAFNLVKDSATGLSKGYAFCEYVDVNISDQAIAGLNGMQLGDKKLLVQRAS--VGS 337
Query: 750 KNNELEILNDSKEVMEAGEVNNVKDNRPASGTMGDEPSQ-LCELDTDMAVEYQARDSTSE 808
KN L +N + ++ + N N+ MG P++ LC ++ E + E
Sbjct: 338 KNTTLTGINQTPVTLQVPGLMNSSVNQ-----MGGIPTEVLCLMNMVAPEELLDDEEYEE 392
Query: 809 IV 810
IV
Sbjct: 393 IV 394
Score = 45 (20.9 bits), Expect = 3.3e-10, Sum P(3) = 3.3e-10
Identities = 11/46 (23%), Positives = 22/46 (47%)
Query: 583 EVNEDHEEPCAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLD 628
E+ ED + C+ V + P+ + GL+ + G++ +V D
Sbjct: 392 EIVEDVRDECSKYGQVKSIEIPRPVDGLD-IPGTGKIFVEFMSVFD 436
>ZFIN|ZDB-GENE-040426-1881 [details] [associations]
symbol:u2af2b "U2 small nuclear RNA auxiliary
factor 2b" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0046660 "female sex differentiation" evidence=IEA]
InterPro:IPR000504 InterPro:IPR006529 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
ZFIN:ZDB-GENE-040426-1881 GO:GO:0005634 GO:GO:0000166 GO:GO:0006397
Gene3D:3.30.70.330 GO:GO:0003723 GeneTree:ENSGT00690000102089
eggNOG:NOG298004 HOGENOM:HOG000180745 KO:K12837 TIGRFAMs:TIGR01642
HOVERGEN:HBG062169 OrthoDB:EOG4PRSQX EMBL:BX950195 EMBL:BC065869
IPI:IPI00502836 RefSeq:NP_991252.1 UniGene:Dr.77328 SMR:Q6P022
STRING:Q6P022 Ensembl:ENSDART00000023571 GeneID:402989
KEGG:dre:402989 CTD:402989 InParanoid:Q6P022 OMA:HERDKEN
NextBio:20816796 Uniprot:Q6P022
Length = 475
Score = 161 (61.7 bits), Expect = 2.7e-22, Sum P(4) = 2.7e-22
Identities = 55/189 (29%), Positives = 90/189 (47%)
Query: 368 RKRRTEAAAKTPSP-INRSP---EKKSAK--WDVAPVETYSVPSNVHTSNQAASSNAHEM 421
R RR++ P ++RSP +KK K WDV P P H + A +
Sbjct: 64 RHRRSDHTQNHPQENVSRSPHREKKKKIKKYWDVPP------PGFEHITPM--QYKAMQA 115
Query: 422 VSSDPVTST--TQKPLAGISVSASLAKLNVSMDSVQLTQSNRPMRRLCVENLPLSASEKA 479
P T+ T P G++V+ + V + Q+T R RRL V N+P +E++
Sbjct: 116 AGQIPATALLPTMTP-DGLAVTPT----PVPVVGSQMT---RQARRLYVGNIPFGITEES 167
Query: 480 LMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSI 539
+M+F N + G+ G+ P + I ++K AF+EF + ++ + A+ DG F
Sbjct: 168 MMDFFNAQMRLGGLTQAPGN-PVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQAQS 226
Query: 540 LKIKRPKEF 548
LKI+RP ++
Sbjct: 227 LKIRRPHDY 235
Score = 152 (58.6 bits), Expect = 2.7e-22, Sum P(4) = 2.7e-22
Identities = 47/156 (30%), Positives = 77/156 (49%)
Query: 553 IFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDH--EEPCAFIEYVDQLVTPKAIAGL 610
+FIGG+ L+ V E++ +FGPLKA++ + + AF EYVD V +AIAGL
Sbjct: 264 LFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDVNVNDQAIAGL 323
Query: 611 NGLKVGGQVLTAVQAVLDG--SIMDNSGNPPFH-GIPK-HALPLLKK---PTEVLKLKNV 663
NG+++ + L +A + + M + P +P + P+++ PTEVL L N+
Sbjct: 324 NGMQLADKKLLVQRASVGAKNATMTSINETPVTLQVPGLTSNPMIQMGGIPTEVLCLMNM 383
Query: 664 FNPEGFXXXXXXXXXXXXXXXXXXCARFGSVKSVNV 699
PE C+++G VKS+ +
Sbjct: 384 VAPEELIDDEEYEEIVEDVKEE--CSKYGQVKSIEI 417
Score = 62 (26.9 bits), Expect = 3.1e-10, Sum P(3) = 3.1e-10
Identities = 18/71 (25%), Positives = 30/71 (42%)
Query: 193 QGRSHNQSIVDSRDEATKKHSRDLTGKDRHADKSGEKSERESKRKHRNRDDEKNRDKSAA 252
+ R +S SR K+ SR+ ++R D S E+ R S + + +R
Sbjct: 28 ENRHRRRSPSRSRSRERKRRSRERRSRERRGD-SKERRHRRSDHTQNHPQENVSRSPHRE 86
Query: 253 KKVDLGKGHDL 263
KK + K D+
Sbjct: 87 KKKKIKKYWDV 97
Score = 58 (25.5 bits), Expect = 2.7e-22, Sum P(4) = 2.7e-22
Identities = 14/52 (26%), Positives = 24/52 (46%)
Query: 203 DSRDEATKKHSRDLTGKDRHADKSGEKSERESKRKHRNRDDEKNRDKSAAKK 254
+ + ++ H RD + R S +S RE KR+ R R + R S ++
Sbjct: 14 NKQGDSLNGHERDKENRHRRRSPSRSRS-RERKRRSRERRSRERRGDSKERR 64
Score = 58 (25.5 bits), Expect = 8.0e-10, Sum P(3) = 8.0e-10
Identities = 24/97 (24%), Positives = 47/97 (48%)
Query: 94 EEYVKVGSGKKEDNALTKNVDSSRQRDGENRDLETKLKEDYVAKSNHRRTLKSEIRLKDR 153
+E+ + S K+ ++L + +RD ENR + + ++S R+ E R ++R
Sbjct: 5 DEFERQLSENKQGDSL-----NGHERDKENRH---RRRSPSRSRSRERKRRSRERRSRER 56
Query: 154 SPGNEKDRGNRGSDTKLKADVTKETSSKPNVKSEKLI 190
G+ K+R +R SD + + S P+ + +K I
Sbjct: 57 R-GDSKERRHRRSD-HTQNHPQENVSRSPHREKKKKI 91
Score = 55 (24.4 bits), Expect = 2.7e-22, Sum P(4) = 2.7e-22
Identities = 14/43 (32%), Positives = 20/43 (46%)
Query: 898 GCVFVEYMRAEASCMAAHSLHRRLFDDRIVAVEYIPLNLYRAR 940
G +FVE+ S A L R F +R+V +Y + Y R
Sbjct: 430 GKIFVEFTSVYDSQKAMQGLTGRKFANRVVVTKYCDPDAYHRR 472
Score = 48 (22.0 bits), Expect = 8.1e-09, Sum P(3) = 8.1e-09
Identities = 19/82 (23%), Positives = 35/82 (42%)
Query: 146 SEIRLKDRSPGNEKDRGNRGSDTKLKADVTKETS--SKPNVKSEKLIPSQGRSHNQSIVD 203
SE + D G+E+D+ NR ++E S+ E+ S+ R H +S
Sbjct: 12 SENKQGDSLNGHERDKENRHRRRSPSRSRSRERKRRSRERRSRERRGDSKERRHRRS--- 68
Query: 204 SRDEATKKHSRDLTGKDRHADK 225
+ T+ H ++ + H +K
Sbjct: 69 ---DHTQNHPQENVSRSPHREK 87
Score = 47 (21.6 bits), Expect = 5.2e-10, Sum P(3) = 5.2e-10
Identities = 12/46 (26%), Positives = 23/46 (50%)
Query: 583 EVNEDHEEPCAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQAVLD 628
E+ ED +E C+ V + P+ + GL+ + G++ +V D
Sbjct: 397 EIVEDVKEECSKYGQVKSIEIPRPVDGLD-IPGTGKIFVEFTSVYD 441
Score = 44 (20.5 bits), Expect = 1.1e-09, Sum P(3) = 1.1e-09
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 594 FIEYVDQLVTPKAIAGLNGLKVGGQVL 620
F+E+ + KA+ GL G K +V+
Sbjct: 433 FVEFTSVYDSQKAMQGLTGRKFANRVV 459
Score = 38 (18.4 bits), Expect = 7.8e-11, Sum P(4) = 7.8e-11
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 691 FGSVKSVNVVKYGDSNISTIQA-CE 714
FG +K+ N+VK + +S A CE
Sbjct: 285 FGPLKAFNLVKDSATGLSKGYAFCE 309
>UNIPROTKB|E2R0G3 [details] [associations]
symbol:U2AF2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR006529 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723
GeneTree:ENSGT00690000102089 KO:K12837 TIGRFAMs:TIGR01642
OMA:TQMGGLP CTD:11338 EMBL:AAEX03000723 RefSeq:XP_003638845.1
ProteinModelPortal:E2R0G3 Ensembl:ENSCAFT00000004031
GeneID:100687048 KEGG:cfa:100687048 Uniprot:E2R0G3
Length = 471
Score = 161 (61.7 bits), Expect = 3.8e-21, Sum P(3) = 3.8e-21
Identities = 62/223 (27%), Positives = 97/223 (43%)
Query: 333 RQHSDIDSSRVTGNGLSGHYRRHDGSTSGLGGYSPRKRRTEAAAKTPSPINRSP---EKK 389
R HS S S R D ++ K T A + + RSP +KK
Sbjct: 27 RSHSRSRSRDRKRRSRSRDRRNRDQRSASRDRRRRSKPLTRGAKEEHGGLIRSPRHEKKK 86
Query: 390 SAK--WDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTST--TQKPLAGISVSASLA 445
+ WDV P P H + A + P T+ T P G++V+ +
Sbjct: 87 KVRKYWDVPP------PGFEHITPM--QYKAMQAAGQIPATALLPTMTP-DGLAVTPT-- 135
Query: 446 KLNVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGC 505
V + Q+T R RRL V N+P +E+A+M+F N + G+ G+ P +
Sbjct: 136 --PVPVVGSQMT---RQARRLYVGNIPFGITEEAMMDFFNAQMRLGGLTQAPGN-PVLAV 189
Query: 506 VIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEF 548
I ++K AF+EF + ++ + A+ DG F G LKI+RP ++
Sbjct: 190 QINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDY 232
Score = 158 (60.7 bits), Expect = 3.8e-21, Sum P(3) = 3.8e-21
Identities = 47/155 (30%), Positives = 75/155 (48%)
Query: 553 IFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDH--EEPCAFIEYVDQLVTPKAIAGL 610
+FIGG+ L+ V E++ +FGPLKA++ + + AF EYVD VT +AIAGL
Sbjct: 261 LFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGL 320
Query: 611 NGLKVGGQVLTAVQAVLDG--SIMDNSGNPPFH----GIPKHALPLLKKPTEVLKLKNVF 664
NG+++G + L +A + + + P G+ + + PTEVL L N+
Sbjct: 321 NGMQLGDKKLLVQRASVGAKNATLSTINQTPVTLQVPGLMSSQVQMGGHPTEVLCLMNMV 380
Query: 665 NPEGFXXXXXXXXXXXXXXXXXXCARFGSVKSVNV 699
PE C+++G VKS+ +
Sbjct: 381 LPEELLDDEEYEEIVEDVRDE--CSKYGLVKSIEI 413
Score = 68 (29.0 bits), Expect = 1.3e-11, Sum P(3) = 1.3e-11
Identities = 17/45 (37%), Positives = 28/45 (62%)
Query: 211 KHSRDLTGKDRHADKSGEKSE-RESKRKHRNRDDEKNRDKSAAKK 254
K RD ++RH +S +S R+ KR+ R+RD +NRD+ +A +
Sbjct: 15 KQERDK--ENRHRKRSHSRSRSRDRKRRSRSRD-RRNRDQRSASR 56
Score = 56 (24.8 bits), Expect = 3.8e-21, Sum P(3) = 3.8e-21
Identities = 15/46 (32%), Positives = 21/46 (45%)
Query: 897 PGC--VFVEYMRAEASCMAAHSLHRRLFDDRIVAVEYIPLNLYRAR 940
PGC +FVE+ A L R F +R+V +Y + Y R
Sbjct: 423 PGCGKIFVEFTSVFDCQKAMQGLTGRKFANRVVVTKYCDPDSYHRR 468
Score = 54 (24.1 bits), Expect = 3.4e-10, Sum P(3) = 3.4e-10
Identities = 28/94 (29%), Positives = 37/94 (39%)
Query: 120 DGENRDL-ETKLKEDYVAKSNHRRTLKSEIRLKDRSP-GNEKDRGNRGSDTKLKADVTKE 177
D R L E K + D ++ HR+ S R +DR +DR NR D + A +
Sbjct: 5 DEFERQLNENKQERD--KENRHRKRSHSRSRSRDRKRRSRSRDRRNR--DQR-SASRDRR 59
Query: 178 TSSKPNVKSEKLIPSQGRSHNQSIVDSRDEATKK 211
SKP + K H I R E KK
Sbjct: 60 RRSKPLTRGAK------EEHGGLIRSPRHEKKKK 87
Score = 53 (23.7 bits), Expect = 4.2e-10, Sum P(3) = 4.2e-10
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 195 RSHNQSIVDSRDEATKKHSRDLTGKDRHADKSGEKSERESKRKHRNRDDE 244
RSH++S SRD + SRD +D+ + + R SK R +E
Sbjct: 27 RSHSRS--RSRDRKRRSRSRDRRNRDQRS--ASRDRRRRSKPLTRGAKEE 72
Score = 47 (21.6 bits), Expect = 1.7e-09, Sum P(3) = 1.7e-09
Identities = 19/71 (26%), Positives = 31/71 (43%)
Query: 94 EEYVKVGSGKKEDNALTKNVDS---SRQRDGENRDLETKLKEDYVAKSNHRRTLKSEIRL 150
+E K +K ++ +++ D SR RD NRD + ++ R K E
Sbjct: 16 QERDKENRHRKRSHSRSRSRDRKRRSRSRDRRNRDQRSASRDRRRRSKPLTRGAKEEHGG 75
Query: 151 KDRSPGNEKDR 161
RSP +EK +
Sbjct: 76 LIRSPRHEKKK 86
Score = 43 (20.2 bits), Expect = 6.9e-08, Sum P(2) = 6.9e-08
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 594 FIEYVDQLVTPKAIAGLNGLKVGGQVL 620
F+E+ KA+ GL G K +V+
Sbjct: 429 FVEFTSVFDCQKAMQGLTGRKFANRVV 455
Score = 42 (19.8 bits), Expect = 2.5e-09, Sum P(3) = 2.5e-09
Identities = 27/123 (21%), Positives = 50/123 (40%)
Query: 691 FGSVKSVNVVKYGDSNISTIQA-CEGNE-NTASAGVGQNLTNDETNEKGERLEEVTDHKS 748
FG +K+ N+VK + +S A CE + N + L + +K ++ +
Sbjct: 282 FGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIA-GLNGMQLGDKKLLVQRAS--VG 338
Query: 749 IKNNELEILNDSKEVMEAGEVNNVKDNRPASGTMGDEPSQ-LCELDTDMAVEYQARDSTS 807
KN L +N + ++ V + MG P++ LC ++ + E +
Sbjct: 339 AKNATLSTINQTPVTLQ------VPGLMSSQVQMGGHPTEVLCLMNMVLPEELLDDEEYE 392
Query: 808 EIV 810
EIV
Sbjct: 393 EIV 395
>TAIR|locus:2206001 [details] [associations]
symbol:AT1G60900 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006397 "mRNA processing" evidence=IEA] InterPro:IPR000504
InterPro:IPR006529 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0008380 GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330
GO:GO:0003723 EMBL:AC018908 HSSP:P26368 eggNOG:NOG298004
HOGENOM:HOG000180745 KO:K12837 TIGRFAMs:TIGR01642 EMBL:AY140014
IPI:IPI00528167 PIR:E96634 RefSeq:NP_176287.3 UniGene:At.17780
UniGene:At.52293 ProteinModelPortal:Q8L716 SMR:Q8L716 PaxDb:Q8L716
PRIDE:Q8L716 EnsemblPlants:AT1G60900.1 GeneID:842382
KEGG:ath:AT1G60900 GeneFarm:4545 TAIR:At1g60900 InParanoid:Q8L716
OMA:TQMGGLP PhylomeDB:Q8L716 ProtClustDB:CLSN2918395
Genevestigator:Q8L716 Uniprot:Q8L716
Length = 589
Score = 133 (51.9 bits), Expect = 6.5e-21, Sum P(4) = 6.5e-21
Identities = 51/199 (25%), Positives = 87/199 (43%)
Query: 353 RRHDGSTSGLGGYSPRKRRTEAAAKTPSPINRSPEKKSAKWDVAPVETYSVPSNVHTSNQ 412
R S S S + ++E +++ S +RS K+ + +D+AP P + +
Sbjct: 152 RSRSRSRSERRSRSEHRHKSEHRSRSRSR-SRSKSKRRSGFDMAP------PDMLAATAV 204
Query: 413 AASSNAHEMVSSDPVTSTTQKPLAGISVSA---SLAKLNVSMDSVQLTQSNRPMRRLCVE 469
AA+ V S P T+T + + L L V Q+ R RR+ V
Sbjct: 205 AAAGQ----VPSVPTTATIPGMFSNMFPMVPGQQLGALPVLPVQAMTQQATRHARRVYVG 260
Query: 470 NLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAEDASAALC 529
LP +A+E+++ F + + + G + I EK AFVE + E+AS A+
Sbjct: 261 GLPPTANEQSVSTFFSQVMSAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMA 320
Query: 530 CDGCSFSGSILKIKRPKEF 548
DG G +K++RP ++
Sbjct: 321 LDGIILEGVPVKVRRPTDY 339
Score = 118 (46.6 bits), Expect = 2.2e-12, Sum P(3) = 2.2e-12
Identities = 42/163 (25%), Positives = 78/163 (47%)
Query: 103 KKEDNALT-KNVDSSRQRDGENRDLETKLKEDYVAKSNHRRTLKSEIRLKDRSPGNEKDR 161
KK+ + ++ K+ ++ R +DG N+D + + D KS R KS R +DR ++ R
Sbjct: 43 KKDSSKISEKDNENGRDKDG-NKDRDREKDRDR-EKSRDRDREKSRDRDRDRERSKDRQR 100
Query: 162 GNRGSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQSIVDSRDEATKKHSRDLTGKDR 221
D D ++E S K + + RS ++ SRD R++ + R
Sbjct: 101 DRHHRDRH--RDRSRERSEKRDDLDDD---HHRRSRDRDRRRSRDR-----DREVRHRRR 150
Query: 222 HADKSGEKSERESKRKHRNRDDEKNRDKSAAK-KVDLGKGHDL 263
+S +SER S+ +HR++ + ++R +S ++ K G D+
Sbjct: 151 SRSRSRSRSERRSRSEHRHKSEHRSRSRSRSRSKSKRRSGFDM 193
Score = 117 (46.2 bits), Expect = 6.5e-21, Sum P(4) = 6.5e-21
Identities = 27/81 (33%), Positives = 47/81 (58%)
Query: 553 IFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNED--HEEPCAFIEYVDQLVTPKAIAGL 610
IF+GG+ + + E++ +FGPL+ ++ + + + + AF Y D VT A A L
Sbjct: 377 IFVGGLPYYFTEVQIRELLESFGPLRGFNLVKDRETGNSKGYAFCVYQDPSVTDIACAAL 436
Query: 611 NGLKVGGQVLTAVQAVLDGSI 631
NG+K+G + LT V+ + G+I
Sbjct: 437 NGIKMGDKTLT-VRRAIQGAI 456
Score = 109 (43.4 bits), Expect = 6.5e-21, Sum P(4) = 6.5e-21
Identities = 47/143 (32%), Positives = 67/143 (46%)
Query: 116 SRQRDGENR-DLETK-LKEDYVAKSNHRRTLKSEIRLKDRSPGNEKDRGNRGSDTKLKAD 173
S + EN LE+ ED +KS LK KD S +EKD N G D D
Sbjct: 14 STENHNENYISLESSPFHED--SKSRESHDLK-----KDSSKISEKDNEN-GRDK----D 61
Query: 174 VTKETSSKPNVKSEKLIPSQGRSHNQSIVDSRD-EATKKHSRDLTGKDRHADKSGEKSER 232
K+ + + EK S+ R +S RD E +K RD +DRH D+S E+SE+
Sbjct: 62 GNKDRDREKDRDREK---SRDRDREKSRDRDRDRERSKDRQRDRHHRDRHRDRSRERSEK 118
Query: 233 ------ESKRKHRNRDDEKNRDK 249
+ R+ R+RD ++RD+
Sbjct: 119 RDDLDDDHHRRSRDRDRRRSRDR 141
Score = 69 (29.3 bits), Expect = 7.2e-17, Sum P(4) = 7.2e-17
Identities = 18/71 (25%), Positives = 32/71 (45%)
Query: 196 SHNQSIVDSRDEATKKHSRDLTGKDRHADKS--GEKSERESKRK--HRNRDDEKNRDKSA 251
+HN++ + + S+ D D S EK + K +++RD EK+RD+
Sbjct: 17 NHNENYISLESSPFHEDSKSRESHDLKKDSSKISEKDNENGRDKDGNKDRDREKDRDREK 76
Query: 252 AKKVDLGKGHD 262
++ D K D
Sbjct: 77 SRDRDREKSRD 87
Score = 67 (28.6 bits), Expect = 1.0e-13, Sum P(3) = 1.0e-13
Identities = 18/43 (41%), Positives = 24/43 (55%)
Query: 585 NEDHEE-PCA---FIEYVDQLVTPKAIAGLNGLKVGGQVLTAV 623
N DH+ P F+EY D + KA +G+NG K GG + AV
Sbjct: 533 NPDHDPTPGVGKVFLEYADVDGSSKARSGMNGRKFGGNQVVAV 575
Score = 62 (26.9 bits), Expect = 6.5e-21, Sum P(4) = 6.5e-21
Identities = 19/52 (36%), Positives = 27/52 (51%)
Query: 889 PNQGHIFEPGC--VFVEYMRAEASCMAAHSLHRRLFD-DRIVAVEYIPLNLY 937
PN H PG VF+EY + S A ++ R F +++VAV Y P + Y
Sbjct: 532 PNPDHDPTPGVGKVFLEYADVDGSSKARSGMNGRKFGGNQVVAV-YYPEDKY 582
Score = 56 (24.8 bits), Expect = 3.7e-06, Sum P(3) = 3.7e-06
Identities = 24/85 (28%), Positives = 34/85 (40%)
Query: 116 SRQRDGENRDLE-----TKLKEDYVAKSNHRRTLKSEIRLKDRSPGNEKDRGNRGSDTK- 169
SR RD E R ++ + + ++S HR KSE R + RS K + G D
Sbjct: 138 SRDRDREVRHRRRSRSRSRSRSERRSRSEHRH--KSEHRSRSRSRSRSKSKRRSGFDMAP 195
Query: 170 ---LKADVTKETSSKPNVKSEKLIP 191
L A P+V + IP
Sbjct: 196 PDMLAATAVAAAGQVPSVPTTATIP 220
>UNIPROTKB|P26368 [details] [associations]
symbol:U2AF2 "Splicing factor U2AF 65 kDa subunit"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0070742
"C2H2 zinc finger domain binding" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0019899 "enzyme binding"
evidence=IPI] [GO:0048025 "negative regulation of mRNA splicing,
via spliceosome" evidence=IDA] [GO:0006397 "mRNA processing"
evidence=TAS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC;TAS] [GO:0005681 "spliceosomal complex" evidence=IDA]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006366 "transcription
from RNA polymerase II promoter" evidence=TAS] [GO:0006369
"termination of RNA polymerase II transcription" evidence=TAS]
[GO:0006406 "mRNA export from nucleus" evidence=TAS] [GO:0008380
"RNA splicing" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0031124 "mRNA 3'-end processing" evidence=TAS]
Reactome:REACT_71 InterPro:IPR000504 InterPro:IPR006529
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0005654 GO:GO:0000166 Reactome:REACT_1675 Gene3D:3.30.70.330
GO:GO:0005681 GO:GO:0003723 GO:GO:0006406 GO:GO:0000398
EMBL:CH471135 Reactome:REACT_1788 GO:GO:0048025 GO:GO:0006369
GO:GO:0031124 Reactome:REACT_78 PDB:4FXW PDBsum:4FXW
eggNOG:NOG298004 HOGENOM:HOG000180745 KO:K12837 TIGRFAMs:TIGR01642
OMA:TQMGGLP PDB:1JMT PDBsum:1JMT EMBL:X64044 EMBL:BC008740
EMBL:BC030574 IPI:IPI00031556 IPI:IPI00830039 PIR:S20250
RefSeq:NP_001012496.1 RefSeq:NP_009210.1 UniGene:Hs.528007 PDB:1O0P
PDB:1OPI PDB:1U2F PDB:2G4B PDB:2HZC PDB:2U2F PDB:2YH0 PDB:2YH1
PDBsum:1O0P PDBsum:1OPI PDBsum:1U2F PDBsum:2G4B PDBsum:2HZC
PDBsum:2U2F PDBsum:2YH0 PDBsum:2YH1 ProteinModelPortal:P26368
SMR:P26368 DIP:DIP-2154N IntAct:P26368 MINT:MINT-1192370
STRING:P26368 PhosphoSite:P26368 DMDM:267188 PaxDb:P26368
PRIDE:P26368 DNASU:11338 Ensembl:ENST00000308924
Ensembl:ENST00000450554 GeneID:11338 KEGG:hsa:11338 UCSC:uc002qlt.3
UCSC:uc002qlu.3 CTD:11338 GeneCards:GC19P056165 HGNC:HGNC:23156
HPA:CAB010910 MIM:191318 neXtProt:NX_P26368 PharmGKB:PA134908683
HOVERGEN:HBG062169 InParanoid:P26368 OrthoDB:EOG4PRSQX
PhylomeDB:P26368 ChiTaRS:U2AF2 EvolutionaryTrace:P26368
GenomeRNAi:11338 NextBio:43079 PMAP-CutDB:P26368 Bgee:P26368
CleanEx:HS_U2AF2 Genevestigator:P26368 GermOnline:ENSG00000063244
Uniprot:P26368
Length = 475
Score = 161 (61.7 bits), Expect = 1.7e-20, Sum P(3) = 1.7e-20
Identities = 62/223 (27%), Positives = 97/223 (43%)
Query: 333 RQHSDIDSSRVTGNGLSGHYRRHDGSTSGLGGYSPRKRRTEAAAKTPSPINRSP---EKK 389
R HS S S R D ++ K T A + + RSP +KK
Sbjct: 27 RSHSRSRSRDRKRRSRSRDRRNRDQRSASRDRRRRSKPLTRGAKEEHGGLIRSPRHEKKK 86
Query: 390 SAK--WDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTST--TQKPLAGISVSASLA 445
+ WDV P P H + A + P T+ T P G++V+ +
Sbjct: 87 KVRKYWDVPP------PGFEHITPM--QYKAMQAAGQIPATALLPTMTP-DGLAVTPT-- 135
Query: 446 KLNVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGC 505
V + Q+T R RRL V N+P +E+A+M+F N + G+ G+ P +
Sbjct: 136 --PVPVVGSQMT---RQARRLYVGNIPFGITEEAMMDFFNAQMRLGGLTQAPGN-PVLAV 189
Query: 506 VIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEF 548
I ++K AF+EF + ++ + A+ DG F G LKI+RP ++
Sbjct: 190 QINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDY 232
Score = 152 (58.6 bits), Expect = 1.7e-20, Sum P(3) = 1.7e-20
Identities = 50/160 (31%), Positives = 76/160 (47%)
Query: 553 IFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDH--EEPCAFIEYVDQLVTPKAIAGL 610
+FIGG+ L+ V E++ +FGPLKA++ + + AF EYVD VT +AIAGL
Sbjct: 261 LFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGL 320
Query: 611 NGLKVGGQVLTAVQAVLDGSIMDNSGNPP-----------FHGIPKHALPLLKKPTEVLK 659
NG+++G + L VQ G+ +PP G+ + + PTEVL
Sbjct: 321 NGMQLGDKKLL-VQRASVGAKNATLVSPPSTINQTPVTLQVPGLMSSQVQMGGHPTEVLC 379
Query: 660 LKNVFNPEGFXXXXXXXXXXXXXXXXXXCARFGSVKSVNV 699
L N+ PE C+++G VKS+ +
Sbjct: 380 LMNMVLPEELLDDEEYEEIVEDVRDE--CSKYGLVKSIEI 417
Score = 68 (29.0 bits), Expect = 6.2e-11, Sum P(3) = 6.2e-11
Identities = 17/45 (37%), Positives = 28/45 (62%)
Query: 211 KHSRDLTGKDRHADKSGEKSE-RESKRKHRNRDDEKNRDKSAAKK 254
K RD ++RH +S +S R+ KR+ R+RD +NRD+ +A +
Sbjct: 15 KQERDK--ENRHRKRSHSRSRSRDRKRRSRSRD-RRNRDQRSASR 56
Score = 56 (24.8 bits), Expect = 1.7e-20, Sum P(3) = 1.7e-20
Identities = 15/46 (32%), Positives = 21/46 (45%)
Query: 897 PGC--VFVEYMRAEASCMAAHSLHRRLFDDRIVAVEYIPLNLYRAR 940
PGC +FVE+ A L R F +R+V +Y + Y R
Sbjct: 427 PGCGKIFVEFTSVFDCQKAMQGLTGRKFANRVVVTKYCDPDSYHRR 472
Score = 54 (24.1 bits), Expect = 1.6e-09, Sum P(3) = 1.6e-09
Identities = 28/94 (29%), Positives = 37/94 (39%)
Query: 120 DGENRDL-ETKLKEDYVAKSNHRRTLKSEIRLKDRSP-GNEKDRGNRGSDTKLKADVTKE 177
D R L E K + D ++ HR+ S R +DR +DR NR D + A +
Sbjct: 5 DEFERQLNENKQERD--KENRHRKRSHSRSRSRDRKRRSRSRDRRNR--DQR-SASRDRR 59
Query: 178 TSSKPNVKSEKLIPSQGRSHNQSIVDSRDEATKK 211
SKP + K H I R E KK
Sbjct: 60 RRSKPLTRGAK------EEHGGLIRSPRHEKKKK 87
Score = 53 (23.7 bits), Expect = 2.0e-09, Sum P(3) = 2.0e-09
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 195 RSHNQSIVDSRDEATKKHSRDLTGKDRHADKSGEKSERESKRKHRNRDDE 244
RSH++S SRD + SRD +D+ + + R SK R +E
Sbjct: 27 RSHSRS--RSRDRKRRSRSRDRRNRDQRS--ASRDRRRRSKPLTRGAKEE 72
Score = 47 (21.6 bits), Expect = 8.1e-09, Sum P(3) = 8.1e-09
Identities = 19/71 (26%), Positives = 31/71 (43%)
Query: 94 EEYVKVGSGKKEDNALTKNVDS---SRQRDGENRDLETKLKEDYVAKSNHRRTLKSEIRL 150
+E K +K ++ +++ D SR RD NRD + ++ R K E
Sbjct: 16 QERDKENRHRKRSHSRSRSRDRKRRSRSRDRRNRDQRSASRDRRRRSKPLTRGAKEEHGG 75
Query: 151 KDRSPGNEKDR 161
RSP +EK +
Sbjct: 76 LIRSPRHEKKK 86
Score = 43 (20.2 bits), Expect = 7.1e-08, Sum P(2) = 7.1e-08
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 594 FIEYVDQLVTPKAIAGLNGLKVGGQVL 620
F+E+ KA+ GL G K +V+
Sbjct: 433 FVEFTSVFDCQKAMQGLTGRKFANRVV 459
Score = 39 (18.8 bits), Expect = 5.3e-09, Sum P(3) = 5.3e-09
Identities = 25/123 (20%), Positives = 49/123 (39%)
Query: 691 FGSVKSVNVVKYGDSNISTIQA-CEGNE-NTASAGVGQNLTNDETNEKGERLEEVTDHKS 748
FG +K+ N+VK + +S A CE + N + L + +K +L + S
Sbjct: 282 FGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIA-GLNGMQLGDK--KL--LVQRAS 336
Query: 749 IKNNELEILNDSKEVMEAGEVNNVKDNRPASGTMGDEPSQ-LCELDTDMAVEYQARDSTS 807
+ +++ + + V + MG P++ LC ++ + E +
Sbjct: 337 VGAKNATLVSPPSTINQTPVTLQVPGLMSSQVQMGGHPTEVLCLMNMVLPEELLDDEEYE 396
Query: 808 EIV 810
EIV
Sbjct: 397 EIV 399
>MGI|MGI:98886 [details] [associations]
symbol:U2af2 "U2 small nuclear ribonucleoprotein auxiliary
factor (U2AF) 2" species:10090 "Mus musculus" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=ISO]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IDA] [GO:0016607 "nuclear speck" evidence=TAS]
[GO:0019899 "enzyme binding" evidence=ISO] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0048025 "negative
regulation of mRNA splicing, via spliceosome" evidence=ISO]
[GO:0070742 "C2H2 zinc finger domain binding" evidence=IPI]
InterPro:IPR000504 InterPro:IPR006529 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 MGI:MGI:98886
GO:GO:0008380 GO:GO:0000166 GO:GO:0016607 GO:GO:0006397
Gene3D:3.30.70.330 GO:GO:0005681 GO:GO:0003723 GO:GO:0048025
GeneTree:ENSGT00690000102089 eggNOG:NOG298004 HOGENOM:HOG000180745
KO:K12837 TIGRFAMs:TIGR01642 OMA:TQMGGLP CTD:11338
HOVERGEN:HBG062169 OrthoDB:EOG4PRSQX EMBL:X64587 EMBL:AK078496
IPI:IPI00113746 PIR:S22646 RefSeq:NP_001192160.1 UniGene:Mm.360389
PDB:3V4M PDBsum:3V4M ProteinModelPortal:P26369 SMR:P26369
STRING:P26369 PhosphoSite:P26369 PaxDb:P26369 PRIDE:P26369
Ensembl:ENSMUST00000005041 GeneID:22185 KEGG:mmu:22185
UCSC:uc009ezu.2 InParanoid:P26369 NextBio:302149 PMAP-CutDB:P26369
Bgee:P26369 Genevestigator:P26369 GermOnline:ENSMUSG00000030435
Uniprot:P26369
Length = 475
Score = 161 (61.7 bits), Expect = 1.7e-20, Sum P(3) = 1.7e-20
Identities = 62/223 (27%), Positives = 97/223 (43%)
Query: 333 RQHSDIDSSRVTGNGLSGHYRRHDGSTSGLGGYSPRKRRTEAAAKTPSPINRSP---EKK 389
R HS S S R D ++ K T A + + RSP +KK
Sbjct: 27 RSHSRSRSRDRKRRSRSRDRRNRDQRSASRDRRRRSKPLTRGAKEEHGGLIRSPRHEKKK 86
Query: 390 SAK--WDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTST--TQKPLAGISVSASLA 445
+ WDV P P H + A + P T+ T P G++V+ +
Sbjct: 87 KVRKYWDVPP------PGFEHITPM--QYKAMQAAGQIPATALLPTMTP-DGLAVTPT-- 135
Query: 446 KLNVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGC 505
V + Q+T R RRL V N+P +E+A+M+F N + G+ G+ P +
Sbjct: 136 --PVPVVGSQMT---RQARRLYVGNIPFGITEEAMMDFFNAQMRLGGLTQAPGN-PVLAV 189
Query: 506 VIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEF 548
I ++K AF+EF + ++ + A+ DG F G LKI+RP ++
Sbjct: 190 QINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDY 232
Score = 152 (58.6 bits), Expect = 1.7e-20, Sum P(3) = 1.7e-20
Identities = 48/159 (30%), Positives = 75/159 (47%)
Query: 553 IFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDH--EEPCAFIEYVDQLVTPKAIAGL 610
+FIGG+ L+ V E++ +FGPLKA++ + + AF EYVD VT +AIAGL
Sbjct: 261 LFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGL 320
Query: 611 NGLKVGGQVLTAVQAVLDG------SIMDNSGNPPFH----GIPKHALPLLKKPTEVLKL 660
NG+++G + L +A + S+ P G+ + + PTEVL L
Sbjct: 321 NGMQLGDKKLLVQRASVGAKNATLVSLPSTINQTPVTLQVPGLMSSQVQMGGHPTEVLCL 380
Query: 661 KNVFNPEGFXXXXXXXXXXXXXXXXXXCARFGSVKSVNV 699
N+ PE C+++G VKS+ +
Sbjct: 381 MNMVLPEELLDDEEYEEIVEDVRDE--CSKYGLVKSIEI 417
Score = 68 (29.0 bits), Expect = 6.2e-11, Sum P(3) = 6.2e-11
Identities = 17/45 (37%), Positives = 28/45 (62%)
Query: 211 KHSRDLTGKDRHADKSGEKSE-RESKRKHRNRDDEKNRDKSAAKK 254
K RD ++RH +S +S R+ KR+ R+RD +NRD+ +A +
Sbjct: 15 KQERDK--ENRHRKRSHSRSRSRDRKRRSRSRD-RRNRDQRSASR 56
Score = 56 (24.8 bits), Expect = 1.7e-20, Sum P(3) = 1.7e-20
Identities = 15/46 (32%), Positives = 21/46 (45%)
Query: 897 PGC--VFVEYMRAEASCMAAHSLHRRLFDDRIVAVEYIPLNLYRAR 940
PGC +FVE+ A L R F +R+V +Y + Y R
Sbjct: 427 PGCGKIFVEFTSVFDCQKAMQGLTGRKFANRVVVTKYCDPDSYHRR 472
Score = 54 (24.1 bits), Expect = 1.6e-09, Sum P(3) = 1.6e-09
Identities = 28/94 (29%), Positives = 37/94 (39%)
Query: 120 DGENRDL-ETKLKEDYVAKSNHRRTLKSEIRLKDRSP-GNEKDRGNRGSDTKLKADVTKE 177
D R L E K + D ++ HR+ S R +DR +DR NR D + A +
Sbjct: 5 DEFERQLNENKQERD--KENRHRKRSHSRSRSRDRKRRSRSRDRRNR--DQR-SASRDRR 59
Query: 178 TSSKPNVKSEKLIPSQGRSHNQSIVDSRDEATKK 211
SKP + K H I R E KK
Sbjct: 60 RRSKPLTRGAK------EEHGGLIRSPRHEKKKK 87
Score = 53 (23.7 bits), Expect = 2.0e-09, Sum P(3) = 2.0e-09
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 195 RSHNQSIVDSRDEATKKHSRDLTGKDRHADKSGEKSERESKRKHRNRDDE 244
RSH++S SRD + SRD +D+ + + R SK R +E
Sbjct: 27 RSHSRS--RSRDRKRRSRSRDRRNRDQRS--ASRDRRRRSKPLTRGAKEE 72
Score = 47 (21.6 bits), Expect = 8.1e-09, Sum P(3) = 8.1e-09
Identities = 19/71 (26%), Positives = 31/71 (43%)
Query: 94 EEYVKVGSGKKEDNALTKNVDS---SRQRDGENRDLETKLKEDYVAKSNHRRTLKSEIRL 150
+E K +K ++ +++ D SR RD NRD + ++ R K E
Sbjct: 16 QERDKENRHRKRSHSRSRSRDRKRRSRSRDRRNRDQRSASRDRRRRSKPLTRGAKEEHGG 75
Query: 151 KDRSPGNEKDR 161
RSP +EK +
Sbjct: 76 LIRSPRHEKKK 86
Score = 43 (20.2 bits), Expect = 7.1e-08, Sum P(2) = 7.1e-08
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 594 FIEYVDQLVTPKAIAGLNGLKVGGQVL 620
F+E+ KA+ GL G K +V+
Sbjct: 433 FVEFTSVFDCQKAMQGLTGRKFANRVV 459
Score = 38 (18.4 bits), Expect = 6.7e-09, Sum P(3) = 6.7e-09
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 691 FGSVKSVNVVKYGDSNISTIQA-CE 714
FG +K+ N+VK + +S A CE
Sbjct: 282 FGPLKAFNLVKDSATGLSKGYAFCE 306
>RGD|1597319 [details] [associations]
symbol:LOC690372 "similar to U2 (RNU2) small nuclear RNA
auxiliary factor 2 isoform b" species:10116 "Rattus norvegicus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0019899 "enzyme
binding" evidence=IEA] [GO:0048025 "negative regulation of mRNA
splicing, via spliceosome" evidence=IEA] [GO:0070742 "C2H2 zinc
finger domain binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR006529 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 RGD:1597319 GO:GO:0005634 GO:GO:0000166 GO:GO:0006397
Gene3D:3.30.70.330 GO:GO:0003723 GeneTree:ENSGT00690000102089
KO:K12837 TIGRFAMs:TIGR01642 CTD:11338 IPI:IPI00366387
RefSeq:XP_003748811.1 UniGene:Rn.15383 ProteinModelPortal:F2Z3T9
SMR:F2Z3T9 PRIDE:F2Z3T9 Ensembl:ENSRNOT00000021391 GeneID:308335
KEGG:rno:308335 NextBio:740780 Uniprot:F2Z3T9
Length = 475
Score = 161 (61.7 bits), Expect = 1.7e-20, Sum P(3) = 1.7e-20
Identities = 62/223 (27%), Positives = 97/223 (43%)
Query: 333 RQHSDIDSSRVTGNGLSGHYRRHDGSTSGLGGYSPRKRRTEAAAKTPSPINRSP---EKK 389
R HS S S R D ++ K T A + + RSP +KK
Sbjct: 27 RSHSRSRSRDRKRRSRSRDRRNRDQRSASRDRRRRSKPLTRGAKEEHGGLIRSPRHEKKK 86
Query: 390 SAK--WDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTST--TQKPLAGISVSASLA 445
+ WDV P P H + A + P T+ T P G++V+ +
Sbjct: 87 KVRKYWDVPP------PGFEHITPM--QYKAMQAAGQIPATALLPTMTP-DGLAVTPT-- 135
Query: 446 KLNVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGC 505
V + Q+T R RRL V N+P +E+A+M+F N + G+ G+ P +
Sbjct: 136 --PVPVVGSQMT---RQARRLYVGNIPFGITEEAMMDFFNAQMRLGGLTQAPGN-PVLAV 189
Query: 506 VIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEF 548
I ++K AF+EF + ++ + A+ DG F G LKI+RP ++
Sbjct: 190 QINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDY 232
Score = 152 (58.6 bits), Expect = 1.7e-20, Sum P(3) = 1.7e-20
Identities = 48/159 (30%), Positives = 75/159 (47%)
Query: 553 IFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDH--EEPCAFIEYVDQLVTPKAIAGL 610
+FIGG+ L+ V E++ +FGPLKA++ + + AF EYVD VT +AIAGL
Sbjct: 261 LFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGL 320
Query: 611 NGLKVGGQVLTAVQAVLDG------SIMDNSGNPPFH----GIPKHALPLLKKPTEVLKL 660
NG+++G + L +A + S+ P G+ + + PTEVL L
Sbjct: 321 NGMQLGDKKLLVQRASVGAKNATLVSLPSTINQTPVTLQVPGLMSSQVQMGGHPTEVLCL 380
Query: 661 KNVFNPEGFXXXXXXXXXXXXXXXXXXCARFGSVKSVNV 699
N+ PE C+++G VKS+ +
Sbjct: 381 MNMVLPEELLDDEEYEEIVEDVRDE--CSKYGLVKSIEI 417
Score = 68 (29.0 bits), Expect = 6.2e-11, Sum P(3) = 6.2e-11
Identities = 17/45 (37%), Positives = 28/45 (62%)
Query: 211 KHSRDLTGKDRHADKSGEKSE-RESKRKHRNRDDEKNRDKSAAKK 254
K RD ++RH +S +S R+ KR+ R+RD +NRD+ +A +
Sbjct: 15 KQERDK--ENRHRKRSHSRSRSRDRKRRSRSRD-RRNRDQRSASR 56
Score = 56 (24.8 bits), Expect = 1.7e-20, Sum P(3) = 1.7e-20
Identities = 15/46 (32%), Positives = 21/46 (45%)
Query: 897 PGC--VFVEYMRAEASCMAAHSLHRRLFDDRIVAVEYIPLNLYRAR 940
PGC +FVE+ A L R F +R+V +Y + Y R
Sbjct: 427 PGCGKIFVEFTSVFDCQKAMQGLTGRKFANRVVVTKYCDPDSYHRR 472
Score = 54 (24.1 bits), Expect = 1.6e-09, Sum P(3) = 1.6e-09
Identities = 28/94 (29%), Positives = 37/94 (39%)
Query: 120 DGENRDL-ETKLKEDYVAKSNHRRTLKSEIRLKDRSP-GNEKDRGNRGSDTKLKADVTKE 177
D R L E K + D ++ HR+ S R +DR +DR NR D + A +
Sbjct: 5 DEFERQLNENKQERD--KENRHRKRSHSRSRSRDRKRRSRSRDRRNR--DQR-SASRDRR 59
Query: 178 TSSKPNVKSEKLIPSQGRSHNQSIVDSRDEATKK 211
SKP + K H I R E KK
Sbjct: 60 RRSKPLTRGAK------EEHGGLIRSPRHEKKKK 87
Score = 53 (23.7 bits), Expect = 2.0e-09, Sum P(3) = 2.0e-09
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 195 RSHNQSIVDSRDEATKKHSRDLTGKDRHADKSGEKSERESKRKHRNRDDE 244
RSH++S SRD + SRD +D+ + + R SK R +E
Sbjct: 27 RSHSRS--RSRDRKRRSRSRDRRNRDQRS--ASRDRRRRSKPLTRGAKEE 72
Score = 47 (21.6 bits), Expect = 8.1e-09, Sum P(3) = 8.1e-09
Identities = 19/71 (26%), Positives = 31/71 (43%)
Query: 94 EEYVKVGSGKKEDNALTKNVDS---SRQRDGENRDLETKLKEDYVAKSNHRRTLKSEIRL 150
+E K +K ++ +++ D SR RD NRD + ++ R K E
Sbjct: 16 QERDKENRHRKRSHSRSRSRDRKRRSRSRDRRNRDQRSASRDRRRRSKPLTRGAKEEHGG 75
Query: 151 KDRSPGNEKDR 161
RSP +EK +
Sbjct: 76 LIRSPRHEKKK 86
Score = 43 (20.2 bits), Expect = 7.1e-08, Sum P(2) = 7.1e-08
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 594 FIEYVDQLVTPKAIAGLNGLKVGGQVL 620
F+E+ KA+ GL G K +V+
Sbjct: 433 FVEFTSVFDCQKAMQGLTGRKFANRVV 459
Score = 38 (18.4 bits), Expect = 6.7e-09, Sum P(3) = 6.7e-09
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 691 FGSVKSVNVVKYGDSNISTIQA-CE 714
FG +K+ N+VK + +S A CE
Sbjct: 282 FGPLKAFNLVKDSATGLSKGYAFCE 306
>UNIPROTKB|Q24JZ8 [details] [associations]
symbol:U2AF2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070742 "C2H2 zinc finger domain binding" evidence=IEA]
[GO:0048025 "negative regulation of mRNA splicing, via spliceosome"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR006529
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0008380 GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330
GO:GO:0005681 GO:GO:0003723 GO:GO:0048025
GeneTree:ENSGT00690000102089 eggNOG:NOG298004 HOGENOM:HOG000180745
KO:K12837 TIGRFAMs:TIGR01642 OMA:TQMGGLP CTD:11338
HOVERGEN:HBG062169 OrthoDB:EOG4PRSQX EMBL:DAAA02047732
EMBL:BC114160 IPI:IPI00705989 RefSeq:NP_001068804.1
UniGene:Bt.41502 SMR:Q24JZ8 STRING:Q24JZ8
Ensembl:ENSBTAT00000003664 GeneID:507895 KEGG:bta:507895
InParanoid:Q24JZ8 NextBio:20868263 Uniprot:Q24JZ8
Length = 475
Score = 161 (61.7 bits), Expect = 2.7e-20, Sum P(3) = 2.7e-20
Identities = 62/223 (27%), Positives = 97/223 (43%)
Query: 333 RQHSDIDSSRVTGNGLSGHYRRHDGSTSGLGGYSPRKRRTEAAAKTPSPINRSP---EKK 389
R HS S S R D ++ K T A + + RSP +KK
Sbjct: 27 RSHSRSRSRDRKRRSRSRDRRNRDQRSASRDRRRRSKPLTRGAKEEHGGLIRSPRHEKKK 86
Query: 390 SAK--WDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTST--TQKPLAGISVSASLA 445
+ WDV P P H + A + P T+ T P G++V+ +
Sbjct: 87 KVRKYWDVPP------PGFEHITPM--QYKAMQAAGQIPATALLPTMTP-DGLAVTPT-- 135
Query: 446 KLNVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGC 505
V + Q+T R RRL V N+P +E+A+M+F N + G+ G+ P +
Sbjct: 136 --PVPVVGSQMT---RQARRLYVGNIPFGITEEAMMDFFNAQMRLGGLTQAPGN-PVLAV 189
Query: 506 VIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEF 548
I ++K AF+EF + ++ + A+ DG F G LKI+RP ++
Sbjct: 190 QINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDY 232
Score = 150 (57.9 bits), Expect = 2.7e-20, Sum P(3) = 2.7e-20
Identities = 48/159 (30%), Positives = 74/159 (46%)
Query: 553 IFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDH--EEPCAFIEYVDQLVTPKAIAGL 610
+FIGG+ L+ V E++ +FGPLKA++ + + AF EYVD VT +AIAGL
Sbjct: 261 LFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGL 320
Query: 611 NGLKVGGQVLTAVQAVLDG------SIMDNSGNPPFH----GIPKHALPLLKKPTEVLKL 660
NG+++G + L +A + S + P G+ + + PTEVL L
Sbjct: 321 NGMQLGDKKLLVQRASVGAKNATLVSPLSTINQTPVTLQVPGLMSSQVQMGGHPTEVLCL 380
Query: 661 KNVFNPEGFXXXXXXXXXXXXXXXXXXCARFGSVKSVNV 699
N+ PE C ++G VKS+ +
Sbjct: 381 MNMVLPEELLDDEEYEEIVEDVRDE--CGKYGLVKSIEI 417
Score = 68 (29.0 bits), Expect = 1.0e-10, Sum P(3) = 1.0e-10
Identities = 17/45 (37%), Positives = 28/45 (62%)
Query: 211 KHSRDLTGKDRHADKSGEKSE-RESKRKHRNRDDEKNRDKSAAKK 254
K RD ++RH +S +S R+ KR+ R+RD +NRD+ +A +
Sbjct: 15 KQERDK--ENRHRKRSHSRSRSRDRKRRSRSRD-RRNRDQRSASR 56
Score = 56 (24.8 bits), Expect = 2.7e-20, Sum P(3) = 2.7e-20
Identities = 15/46 (32%), Positives = 21/46 (45%)
Query: 897 PGC--VFVEYMRAEASCMAAHSLHRRLFDDRIVAVEYIPLNLYRAR 940
PGC +FVE+ A L R F +R+V +Y + Y R
Sbjct: 427 PGCGKIFVEFTSVFDCQKAMQGLTGRKFANRVVVTKYCDPDSYHRR 472
Score = 54 (24.1 bits), Expect = 2.7e-09, Sum P(3) = 2.7e-09
Identities = 28/94 (29%), Positives = 37/94 (39%)
Query: 120 DGENRDL-ETKLKEDYVAKSNHRRTLKSEIRLKDRSP-GNEKDRGNRGSDTKLKADVTKE 177
D R L E K + D ++ HR+ S R +DR +DR NR D + A +
Sbjct: 5 DEFERQLNENKQERD--KENRHRKRSHSRSRSRDRKRRSRSRDRRNR--DQR-SASRDRR 59
Query: 178 TSSKPNVKSEKLIPSQGRSHNQSIVDSRDEATKK 211
SKP + K H I R E KK
Sbjct: 60 RRSKPLTRGAK------EEHGGLIRSPRHEKKKK 87
Score = 53 (23.7 bits), Expect = 3.3e-09, Sum P(3) = 3.3e-09
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 195 RSHNQSIVDSRDEATKKHSRDLTGKDRHADKSGEKSERESKRKHRNRDDE 244
RSH++S SRD + SRD +D+ + + R SK R +E
Sbjct: 27 RSHSRS--RSRDRKRRSRSRDRRNRDQRS--ASRDRRRRSKPLTRGAKEE 72
Score = 47 (21.6 bits), Expect = 1.3e-08, Sum P(3) = 1.3e-08
Identities = 19/71 (26%), Positives = 31/71 (43%)
Query: 94 EEYVKVGSGKKEDNALTKNVDS---SRQRDGENRDLETKLKEDYVAKSNHRRTLKSEIRL 150
+E K +K ++ +++ D SR RD NRD + ++ R K E
Sbjct: 16 QERDKENRHRKRSHSRSRSRDRKRRSRSRDRRNRDQRSASRDRRRRSKPLTRGAKEEHGG 75
Query: 151 KDRSPGNEKDR 161
RSP +EK +
Sbjct: 76 LIRSPRHEKKK 86
Score = 43 (20.2 bits), Expect = 7.1e-08, Sum P(2) = 7.1e-08
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 594 FIEYVDQLVTPKAIAGLNGLKVGGQVL 620
F+E+ KA+ GL G K +V+
Sbjct: 433 FVEFTSVFDCQKAMQGLTGRKFANRVV 459
Score = 38 (18.4 bits), Expect = 6.7e-09, Sum P(3) = 6.7e-09
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 691 FGSVKSVNVVKYGDSNISTIQA-CE 714
FG +K+ N+VK + +S A CE
Sbjct: 282 FGPLKAFNLVKDSATGLSKGYAFCE 306
>DICTYBASE|DDB_G0286395 [details] [associations]
symbol:u2af2 "U2 snRNP auxiliary factor large
subunit" species:44689 "Dictyostelium discoideum" [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008187 "poly-pyrimidine tract binding"
evidence=ISS] [GO:0005686 "U2 snRNP" evidence=ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=ISS] InterPro:IPR000504
InterPro:IPR006529 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 dictyBase:DDB_G0286395 GenomeReviews:CM000153_GR
GO:GO:0000166 Gene3D:3.30.70.330 EMBL:AAFI02000085 GO:GO:0000398
GO:GO:0005686 GO:GO:0008187 eggNOG:NOG298004 KO:K12837
TIGRFAMs:TIGR01642 RefSeq:XP_637725.1 ProteinModelPortal:Q54LV5
SMR:Q54LV5 EnsemblProtists:DDB0233353 GeneID:8625590
KEGG:ddi:DDB_G0286395 InParanoid:Q54LV5 OMA:DELMDND Uniprot:Q54LV5
Length = 671
Score = 157 (60.3 bits), Expect = 4.1e-20, Sum P(5) = 4.1e-20
Identities = 39/110 (35%), Positives = 58/110 (52%)
Query: 455 QLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQA 514
Q T + RR+ V N+P S+ LMEF N +L++ + G P + C I K A
Sbjct: 259 QETPQKKQSRRIYVGNIPPGISDSELMEFFNAAVLAANLNTKPGP-PVVFCQINAPKCFA 317
Query: 515 FVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEVAIFIGGISRTLSS 564
F+EF + E+A+ A+ DG S LKI+RPK++ + GG + L S
Sbjct: 318 FIEFRSPEEATNAMRFDGISLKNFTLKIRRPKDYQSTSDNTGGNASLLPS 367
Score = 111 (44.1 bits), Expect = 4.1e-20, Sum P(5) = 4.1e-20
Identities = 28/83 (33%), Positives = 45/83 (54%)
Query: 550 EVAIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCAFIEYVDQLVTPKAI 607
E I++GG+ LS + V ++ A+G LKA++ + N + AF EY D VT A
Sbjct: 377 ENKIYVGGLPSNLSEEQVKSLLSAYGKLKAFNLVKDTNTGVSKGFAFCEYQDSEVTDVAC 436
Query: 608 AGLNGLKVGGQVLTAVQAVLDGS 630
+ LNG+ + + L +A + GS
Sbjct: 437 SKLNGIPLADKTLVVQRASI-GS 458
Score = 77 (32.2 bits), Expect = 4.1e-20, Sum P(5) = 4.1e-20
Identities = 27/104 (25%), Positives = 49/104 (47%)
Query: 150 LKDRSPGNEKDRGNRGSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQSIVDSRDEAT 209
++D+ EK G+R D D ++ S + S S R ++ RD
Sbjct: 1 MEDKED-REKRSGDRDKDRDRDRDRDRDHYSGSSSSSSS---SSRRDRDRDRDRDRDR-D 55
Query: 210 KKHSRDLTGKDRHADKSGEKSERESKRKHRNRDDEKNRDKSAAK 253
+ RD G DR D+ ++ +R+ R R+RD +++RD+S+ +
Sbjct: 56 RDRDRDRGGGDRDRDRDRDR-DRDRDRD-RDRDRDRDRDRSSER 97
Score = 70 (29.7 bits), Expect = 2.0e-19, Sum P(5) = 2.0e-19
Identities = 20/63 (31%), Positives = 30/63 (47%)
Query: 203 DSRDEATKKHSRDLT-GKDRHADK---SGEKSERESK-RKHRNRDDEKNRDKSAAKKVDL 257
D D + RD +DR D+ SG S S R+ R+RD +++RD+ + D
Sbjct: 3 DKEDREKRSGDRDKDRDRDRDRDRDHYSGSSSSSSSSSRRDRDRDRDRDRDRDRDRDRDR 62
Query: 258 GKG 260
G G
Sbjct: 63 GGG 65
Score = 70 (29.7 bits), Expect = 2.0e-19, Sum P(5) = 2.0e-19
Identities = 19/71 (26%), Positives = 35/71 (49%)
Query: 194 GRSHNQSIVDSRD-EATKKHSRDLTGKDRHADKSGEKSERESKR---KHRNRDDEKNRDK 249
G S + S RD + + RD +DR D+ G +R+ R + R+RD +++RD+
Sbjct: 31 GSSSSSSSSSRRDRDRDRDRDRD-RDRDRDRDRGGGDRDRDRDRDRDRDRDRDRDRDRDR 89
Query: 250 SAAKKVDLGKG 260
+ + +G
Sbjct: 90 DRDRSSERNRG 100
Score = 60 (26.2 bits), Expect = 2.0e-18, Sum P(5) = 2.0e-18
Identities = 17/69 (24%), Positives = 33/69 (47%)
Query: 195 RSHNQSIVDSRDEATKKHSRDLTGKDRHADKSGEKS-ERESKRKHRNRDDEKNRDKSAAK 253
R H S S ++ + RD +DR D+ ++ +R + R+RD +++RD+ +
Sbjct: 26 RDH-YSGSSSSSSSSSRRDRD-RDRDRDRDRDRDRDRDRGGGDRDRDRDRDRDRDRDRDR 83
Query: 254 KVDLGKGHD 262
D + D
Sbjct: 84 DRDRDRDRD 92
Score = 59 (25.8 bits), Expect = 4.1e-20, Sum P(5) = 4.1e-20
Identities = 15/41 (36%), Positives = 22/41 (53%)
Query: 361 GLGGYSPRKRRTEAAAKTPS---PINRSP-EKKSAKWDVAP 397
G G YS RKR +A++ + P +P +KS+ WD P
Sbjct: 100 GGGDYSSRKRSRSPSARSSTRSDPFTTTPTSRKSSLWDRQP 140
Score = 58 (25.5 bits), Expect = 3.2e-18, Sum P(5) = 3.2e-18
Identities = 22/109 (20%), Positives = 42/109 (38%)
Query: 142 RTLKSEIRLKDRSPGNEKDRGNRGSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQSI 201
R +S R KDR ++DR + + + ++ + + + R
Sbjct: 7 REKRSGDRDKDRDRDRDRDRDHYSGSSSSSSSSSRRDRDRDRDRDRDRDRDRDRDRGGGD 66
Query: 202 VDSRDEATKKHSRDLTGKDRHADKSGEKSERESKRKHRNRDDEKNRDKS 250
D RD + RD +DR D+ ++ S ++R D +R +S
Sbjct: 67 RD-RDR-DRDRDRD---RDRDRDRDRDRDRDRSSERNRGGGDYSSRKRS 110
Score = 53 (23.7 bits), Expect = 1.0e-17, Sum P(5) = 1.0e-17
Identities = 19/65 (29%), Positives = 28/65 (43%)
Query: 104 KEDNALTK-NVDSSRQRDGENRDLETKLKEDYVAKSNHRRTLKSEIRLKDRSPGNEKDRG 162
KED + D R RD +RD + + S+ RR + R +DR ++DR
Sbjct: 4 KEDREKRSGDRDKDRDRD-RDRDRDHYSGSSSSSSSSSRRD-RDRDRDRDRDRDRDRDRD 61
Query: 163 NRGSD 167
G D
Sbjct: 62 RGGGD 66
Score = 49 (22.3 bits), Expect = 4.1e-20, Sum P(5) = 4.1e-20
Identities = 11/38 (28%), Positives = 22/38 (57%)
Query: 900 VFVEYMRAEASCMAAHSLHRRLFDDRIVAVEYIPLNLY 937
V+VE+ + E + A +L R ++ R++ Y P +L+
Sbjct: 623 VYVEFSQVEFAQKACLALGGRKYNGRVLFSAYYPEDLF 660
Score = 40 (19.1 bits), Expect = 5.9e-12, Sum P(4) = 5.9e-12
Identities = 12/44 (27%), Positives = 20/44 (45%)
Query: 887 QDPNQGHIFEPGCVFVEYMRAEASCMAAHSLHRRLFDDRIVAVE 930
+D N G G F EY +E + +A L+ D+ + V+
Sbjct: 411 KDTNTG--VSKGFAFCEYQDSEVTDVACSKLNGIPLADKTLVVQ 452
Score = 39 (18.8 bits), Expect = 7.4e-12, Sum P(4) = 7.4e-12
Identities = 9/27 (33%), Positives = 13/27 (48%)
Query: 594 FIEYVDQLVTPKAIAGLNGLKVGGQVL 620
++E+ KA L G K G+VL
Sbjct: 624 YVEFSQVEFAQKACLALGGRKYNGRVL 650
Score = 38 (18.4 bits), Expect = 3.1e-16, Sum P(5) = 3.1e-16
Identities = 8/26 (30%), Positives = 15/26 (57%)
Query: 231 ERESKRKHRNRDDEKNRDKSAAKKVD 256
E + R+ R+ D +K+RD+ + D
Sbjct: 2 EDKEDREKRSGDRDKDRDRDRDRDRD 27
>FB|FBgn0034834 [details] [associations]
symbol:LS2 "Large Subunit 2" species:7227 "Drosophila
melanogaster" [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0005686 "U2 snRNP" evidence=ISS] [GO:0003729
"mRNA binding" evidence=ISS] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0060968 "regulation of gene silencing"
evidence=IMP] [GO:0033119 "negative regulation of RNA splicing"
evidence=IMP] [GO:0003723 "RNA binding" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR000504
InterPro:IPR006529 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005634 GO:GO:0000166 GO:GO:0003729
GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0033119 GO:GO:0060968
HSSP:P26368 eggNOG:NOG298004 TIGRFAMs:TIGR01642 EMBL:AY075220
ProteinModelPortal:Q8T8Y4 SMR:Q8T8Y4 STRING:Q8T8Y4 PaxDb:Q8T8Y4
PRIDE:Q8T8Y4 FlyBase:FBgn0034834 InParanoid:Q8T8Y4
OrthoDB:EOG40K6F6 ArrayExpress:Q8T8Y4 Bgee:Q8T8Y4 Uniprot:Q8T8Y4
Length = 449
Score = 150 (57.9 bits), Expect = 4.4e-19, Sum P(4) = 4.4e-19
Identities = 34/104 (32%), Positives = 56/104 (53%)
Query: 452 DSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQ----HVHGSLPCIGCVI 507
+S ++ R RRL V N+P +++ +M+F N+ +++ G + H + C
Sbjct: 99 ESAAISMITRQARRLYVGNIPFGVTDEEMMQFFNHQIMALGFEAKSSHYMDGNAVLTCQT 158
Query: 508 QREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFVEV 551
EK AF+EF + ++AS AL DG F G LKI+RP ++ V
Sbjct: 159 NLEKNFAFLEFRSIDEASQALNFDGMVFRGQTLKIRRPHDYQPV 202
Score = 149 (57.5 bits), Expect = 4.4e-19, Sum P(4) = 4.4e-19
Identities = 44/150 (29%), Positives = 68/150 (45%)
Query: 553 IFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCAFIEYVDQLVTPKAIAGL 610
I++GG+ L+ V E++ +FG LK + + N + + AF EY D VT AIAGL
Sbjct: 244 IYVGGLPTCLNQDQVKELLQSFGELKGLNLVMDTNTNLNKGFAFFEYCDPSVTDHAIAGL 303
Query: 611 NGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPK-HALPLLKKPTEVLKLKNVFNPEGF 669
+G+ +G + L +++ G P +P L PTE L L N+ PE
Sbjct: 304 HGMLLGDRRLVVQRSIPGGKNAFPGHLPTVLQVPGISTLQDPGSPTETLCLLNMVRPEEL 363
Query: 670 XXXXXXXXXXXXXXXXXXCARFGSVKSVNV 699
CA+FG V+S+ +
Sbjct: 364 LDDEEFEDIRTDIKQE--CAKFGEVRSIKI 391
Score = 57 (25.1 bits), Expect = 4.4e-19, Sum P(4) = 4.4e-19
Identities = 18/50 (36%), Positives = 22/50 (44%)
Query: 892 GHIFEPGC--VFVEYMRAEASCMAAHSLHRRLFDDRIVAVEYIPLNLYRA 939
G + GC VFV++ E S A +L R F RIV Y Y A
Sbjct: 396 GQFPKRGCGKVFVQFESVEDSQKALKALSGRKFSGRIVMTSYYDPEKYLA 445
Score = 45 (20.9 bits), Expect = 1.1e-08, Sum P(4) = 1.1e-08
Identities = 15/52 (28%), Positives = 26/52 (50%)
Query: 739 RLEEVTDHKSIKNNELEILNDSKEVMEAGEVNNVKDNRPASGTMGDEPSQLC 790
R EE+ D + ++ +I +E + GEV ++K RP +G P + C
Sbjct: 359 RPEELLDDEEFEDIRTDI---KQECAKFGEVRSIKIPRP----IGQFPKRGC 403
Score = 45 (20.9 bits), Expect = 1.0e-06, Sum P(3) = 1.0e-06
Identities = 17/57 (29%), Positives = 21/57 (36%)
Query: 874 MQSSAVENGDNENQDPNQGHIFEPGCVFVEYMRAEASCMAAHSLHRRLFDDRIVAVE 930
+QS G N D N G F EY + A LH L DR + V+
Sbjct: 262 LQSFGELKGLNLVMDTNTN--LNKGFAFFEYCDPSVTDHAIAGLHGMLLGDRRLVVQ 316
Score = 41 (19.5 bits), Expect = 2.5e-06, Sum P(3) = 2.5e-06
Identities = 18/87 (20%), Positives = 41/87 (47%)
Query: 539 ILKIKRPKEFVEVAIFIGGISRTLSSKMVMEIVCA-FGPLKAYHFE--VNEDHEEPCA-- 593
+L + RP+E ++ F + + + E CA FG +++ + + + C
Sbjct: 354 LLNMVRPEELLDDEEF-----EDIRTDIKQE--CAKFGEVRSIKIPRPIGQFPKRGCGKV 406
Query: 594 FIEYVDQLVTPKAIAGLNGLKVGGQVL 620
F+++ + KA+ L+G K G+++
Sbjct: 407 FVQFESVEDSQKALKALSGRKFSGRIV 433
Score = 38 (18.4 bits), Expect = 4.4e-19, Sum P(4) = 4.4e-19
Identities = 19/82 (23%), Positives = 32/82 (39%)
Query: 346 NGLSGHYRRHDGSTSGLGGYS-PRKR--RTEAAAKTPSPINRSPEKKSAKWDVAPVETYS 402
N L R S S S R R R++ + + R + + WD+ P E Y+
Sbjct: 12 NALRSRSRSRSRSRSPFRSQSITRSRPTRSDTIYTERTRLQRRFSRPPSSWDIPP-EGYN 70
Query: 403 -VPSNVHTSNQAASSNAHEMVS 423
+ H + A+ A ++S
Sbjct: 71 HLTPQQHKAMLASGQIASRILS 92
>TAIR|locus:2115280 [details] [associations]
symbol:ATU2AF65A species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0042742 "defense
response to bacterium" evidence=IEP] [GO:0000398 "mRNA splicing,
via spliceosome" evidence=ISS] InterPro:IPR000504
InterPro:IPR006529 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0000166 GO:GO:0042742 Gene3D:3.30.70.330 GO:GO:0003723
EMBL:AL161589 GO:GO:0000398 EMBL:Z99708 HSSP:P26368 EMBL:AF462805
EMBL:AY080711 EMBL:AY143980 EMBL:BT000965 EMBL:BX827587
IPI:IPI00524736 IPI:IPI00525889 IPI:IPI00534734 PIR:C85433
RefSeq:NP_195387.1 RefSeq:NP_849509.1 RefSeq:NP_974695.1
UniGene:At.21204 ProteinModelPortal:O23212 SMR:O23212 IntAct:O23212
STRING:O23212 PaxDb:O23212 PRIDE:O23212 EnsemblPlants:AT4G36690.1
GeneID:829822 KEGG:ath:AT4G36690 TAIR:At4g36690 eggNOG:NOG298004
HOGENOM:HOG000180745 InParanoid:O23212 KO:K12837 OMA:EDIRMEA
PhylomeDB:O23212 ProtClustDB:CLSN2915914 Genevestigator:O23212
TIGRFAMs:TIGR01642 Uniprot:O23212
Length = 573
Score = 149 (57.5 bits), Expect = 4.4e-18, Sum P(4) = 4.4e-18
Identities = 62/254 (24%), Positives = 111/254 (43%)
Query: 307 RAQKRTSYYDREHEGLPSHSTKISSGRQHS-DIDSSRVTGNGLSGHYRR-----HDGSTS 360
++++R+ DR+H H + S R HS + R G YRR HD
Sbjct: 81 KSKERSRDKDRDHR--ERHH-RSSRHRDHSRERGERRERGGRDDDDYRRSRDRDHDRRRD 137
Query: 361 GLGGYSPRKRRTEAAAKTPSPI-NRSPEKKSAK---WDVAPVETYSVPSNVHTSNQAASS 416
GG R+ R+ + ++ +RSP K + +D+AP P++ + AA +
Sbjct: 138 DRGGRRSRRSRSRSKDRSERRTRSRSPSKSKQRVSGFDMAP------PASAMLAAGAAVT 191
Query: 417 NAHEMVSSDP-VTSTTQKP-LAGISVSASLAKLNVSMDSVQLTQSNRPMRRLCVENLPLS 474
++ + P + P + + S L++ Q+ R RR+ V L +
Sbjct: 192 G--QVPPAPPTLPGAGMFPNMFPLPTGQSFGGLSMMPIQAMTQQATRHARRVYVGGLSPT 249
Query: 475 ASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCS 534
A+E+++ F + + + G + I EK AFVE + E+AS A+ DG
Sbjct: 250 ANEQSVATFFSQVMAAVGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMSLDGII 309
Query: 535 FSGSILKIKRPKEF 548
F G+ +K++RP ++
Sbjct: 310 FEGAPVKVRRPSDY 323
Score = 115 (45.5 bits), Expect = 8.7e-10, Sum P(3) = 8.7e-10
Identities = 44/158 (27%), Positives = 76/158 (48%)
Query: 119 RDGENRD-LETKLKEDYVAKSNHRRTLKSEIRLKDRSPGNEKDRGNRGSDTKLKA----- 172
RDGE D L++K K + ++ + R T +S+ R +R G +KDR R S+ ++
Sbjct: 25 RDGEIEDQLDSKPKRE--SRDHERETSRSKDR--EREKGRDKDR-ERDSEVSRRSRDRDG 79
Query: 173 DVTKETS-SKPNVKSEKLI-PSQGRSHNQSIVD-----SRDEATKKHSRDLTGKDRHADK 225
+ +KE S K E+ S+ R H++ + RD+ + SRD DR D
Sbjct: 80 EKSKERSRDKDRDHRERHHRSSRHRDHSRERGERRERGGRDDDDYRRSRD-RDHDRRRDD 138
Query: 226 SGEKSERESKRKHRNRDDEKNRDKSAAKKVDLGKGHDL 263
G + R S+ + ++R + + R +S +K G D+
Sbjct: 139 RGGRRSRRSRSRSKDRSERRTRSRSPSKSKQRVSGFDM 176
Score = 106 (42.4 bits), Expect = 4.4e-18, Sum P(4) = 4.4e-18
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 553 IFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHE----EPCAFIEYVDQLVTPKAIA 608
IF+GG+ + V E++ +FG LK F++ +D E + AF Y D VT A A
Sbjct: 361 IFVGGLPYYFTESQVRELLESFGGLKG--FDLVKDRETGNSKGYAFCVYQDLSVTDIACA 418
Query: 609 GLNGLKVGGQVLTAVQA 625
LNG+K+G + LT +A
Sbjct: 419 ALNGIKMGDKTLTVRRA 435
Score = 86 (35.3 bits), Expect = 4.4e-18, Sum P(4) = 4.4e-18
Identities = 25/84 (29%), Positives = 42/84 (50%)
Query: 186 SEKLIPSQGRSHNQSIVDSRDEATKKHSRD-----LTGKDRHADKSGEKS-ERESK--RK 237
++ + + + I D D K+ SRD KDR +K +K ER+S+ R+
Sbjct: 14 ADAIYDEENGGRDGEIEDQLDSKPKRESRDHERETSRSKDREREKGRDKDRERDSEVSRR 73
Query: 238 HRNRDDEKNRDKSAAKKVDLGKGH 261
R+RD EK++++S K D + H
Sbjct: 74 SRDRDGEKSKERSRDKDRDHRERH 97
Score = 78 (32.5 bits), Expect = 5.0e-06, Sum P(3) = 5.0e-06
Identities = 29/120 (24%), Positives = 50/120 (41%)
Query: 102 GKKEDNALTKNVDS-SRQRDGENRDLETKLKEDYVAKSNHRRTLKSEIRLKDRSPGNEKD 160
G+ +D V SR RDGE + E +D + H R+ S R R G ++
Sbjct: 59 GRDKDRERDSEVSRRSRDRDGE-KSKERSRDKDRDHRERHHRS--SRHRDHSRERGERRE 115
Query: 161 RGNRGSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQSIVDSRDEATKKHSRDLTGKD 220
RG R D ++ + + + S+ RS ++S +R + K + ++G D
Sbjct: 116 RGGRDDDDYRRSRDRDHDRRRDDRGGRRSRRSRSRSKDRSERRTRSRSPSKSKQRVSGFD 175
Score = 56 (24.8 bits), Expect = 4.9e-12, Sum P(3) = 4.9e-12
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 594 FIEYVDQLVTPKAIAGLNGLKVGGQVLTAV 623
F++Y D + +A G+NG K GG + AV
Sbjct: 530 FLKYADTDGSTRARFGMNGRKFGGNEVVAV 559
Score = 50 (22.7 bits), Expect = 4.4e-18, Sum P(4) = 4.4e-18
Identities = 17/60 (28%), Positives = 27/60 (45%)
Query: 873 GMQSSAVENGDNENQDPNQGHIFEPGCVFVEYMRAEASCMAAHSLHRRLFD-DRIVAVEY 931
G + A+ N PN + G VF++Y + S A ++ R F + +VAV Y
Sbjct: 502 GGKFGALTNVVIPRPSPNGEPVAGLGKVFLKYADTDGSTRARFGMNGRKFGGNEVVAVYY 561
>UNIPROTKB|K7ENG2 [details] [associations]
symbol:U2AF2 "Splicing factor U2AF 65 kDa subunit"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
InterPro:IPR000504 InterPro:IPR006529 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 Gene3D:3.30.70.330
EMBL:AC008735 TIGRFAMs:TIGR01642 HGNC:HGNC:23156
Ensembl:ENST00000590551 Uniprot:K7ENG2
Length = 307
Score = 158 (60.7 bits), Expect = 4.5e-17, Sum P(3) = 4.5e-17
Identities = 47/155 (30%), Positives = 75/155 (48%)
Query: 553 IFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDH--EEPCAFIEYVDQLVTPKAIAGL 610
+FIGG+ L+ V E++ +FGPLKA++ + + AF EYVD VT +AIAGL
Sbjct: 97 LFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGL 156
Query: 611 NGLKVGGQVLTAVQAVLDG--SIMDNSGNPPFH----GIPKHALPLLKKPTEVLKLKNVF 664
NG+++G + L +A + + + P G+ + + PTEVL L N+
Sbjct: 157 NGMQLGDKKLLVQRASVGAKNATLSTINQTPVTLQVPGLMSSQVQMGGHPTEVLCLMNMV 216
Query: 665 NPEGFXXXXXXXXXXXXXXXXXXCARFGSVKSVNV 699
PE C+++G VKS+ +
Sbjct: 217 LPEELLDDEEYEEIVEDVRDE--CSKYGLVKSIEI 249
Score = 109 (43.4 bits), Expect = 4.5e-17, Sum P(3) = 4.5e-17
Identities = 22/69 (31%), Positives = 39/69 (56%)
Query: 480 LMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSI 539
+M+F N + G+ G+ P + I ++K AF+EF + ++ + A+ DG F G
Sbjct: 1 MMDFFNAQMRLGGLTQAPGN-PVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQS 59
Query: 540 LKIKRPKEF 548
LKI+RP ++
Sbjct: 60 LKIRRPHDY 68
Score = 56 (24.8 bits), Expect = 4.5e-17, Sum P(3) = 4.5e-17
Identities = 15/46 (32%), Positives = 21/46 (45%)
Query: 897 PGC--VFVEYMRAEASCMAAHSLHRRLFDDRIVAVEYIPLNLYRAR 940
PGC +FVE+ A L R F +R+V +Y + Y R
Sbjct: 259 PGCGKIFVEFTSVFDCQKAMQGLTGRKFANRVVVTKYCDPDSYHRR 304
Score = 42 (19.8 bits), Expect = 0.00014, Sum P(3) = 0.00014
Identities = 27/123 (21%), Positives = 50/123 (40%)
Query: 691 FGSVKSVNVVKYGDSNISTIQA-CEGNE-NTASAGVGQNLTNDETNEKGERLEEVTDHKS 748
FG +K+ N+VK + +S A CE + N + L + +K ++ +
Sbjct: 118 FGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIA-GLNGMQLGDKKLLVQRAS--VG 174
Query: 749 IKNNELEILNDSKEVMEAGEVNNVKDNRPASGTMGDEPSQ-LCELDTDMAVEYQARDSTS 807
KN L +N + ++ V + MG P++ LC ++ + E +
Sbjct: 175 AKNATLSTINQTPVTLQ------VPGLMSSQVQMGGHPTEVLCLMNMVLPEELLDDEEYE 228
Query: 808 EIV 810
EIV
Sbjct: 229 EIV 231
>ASPGD|ASPL0000008688 [details] [associations]
symbol:AN6681 species:162425 "Emericella nidulans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0000349 "generation of catalytic
spliceosome for first transesterification step" evidence=IEA]
[GO:0045292 "mRNA cis splicing, via spliceosome" evidence=IEA]
[GO:0000243 "commitment complex" evidence=IEA] InterPro:IPR000504
InterPro:IPR006529 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005634 GO:GO:0000166 GO:GO:0006397
Gene3D:3.30.70.330 GO:GO:0003723 EMBL:BN001301 TIGRFAMs:TIGR01642
ProteinModelPortal:C8V1L6 EnsemblFungi:CADANIAT00007466 OMA:CISAQIS
Uniprot:C8V1L6
Length = 547
Score = 138 (53.6 bits), Expect = 3.5e-14, Sum P(4) = 3.5e-14
Identities = 54/196 (27%), Positives = 93/196 (47%)
Query: 366 SPRKRRTEAAAKTPSPINRSPEKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSD 425
SP ++R T P + +++ +WD+ P Y NV T+ QA S A ++
Sbjct: 130 SPSRKREPTPDLTDVPSVLTRKRRLTQWDIKP-PGYE---NV-TAEQAKLS-ADDLGMFP 183
Query: 426 PVTSTTQKPLAGISVSASLAKLNV-SMDSVQLTQSN-RPMRRLCVENLPLSASEKALMEF 483
+ Q+P+ + A + + S D+ L SN R +RL V NLP +A+ + L+ F
Sbjct: 184 LPGAPRQQPMDPSRLQAFMNQSGGGSADTSALKPSNSRQAKRLFVYNLPPNATVENLVSF 243
Query: 484 LNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSF-------- 535
N L +G+ + PCI I + A +EF + D + AL DG +
Sbjct: 244 FN--LQLNGLNVIQSVDPCISAQISDDHSFALLEFKSPNDTTVALALDGITMGEHESNGE 301
Query: 536 SGSI--LKIKRPKEFV 549
+G+ L+++RPK+++
Sbjct: 302 NGAAKGLEVRRPKDYI 317
Score = 93 (37.8 bits), Expect = 3.5e-14, Sum P(4) = 3.5e-14
Identities = 24/75 (32%), Positives = 40/75 (53%)
Query: 553 IFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHEEP--CAFIEYVDQLVTPKAIAGL 610
I + I + + + V ++ +FG LK++ + EE AF EY D T A+ GL
Sbjct: 342 ICVSNIPQYIPEEPVTMLLKSFGELKSFVLVKDSSTEESRGIAFCEYADPNTTTIAVQGL 401
Query: 611 NGLKVGGQVLTAVQA 625
NG+++G + L V+A
Sbjct: 402 NGMELGDRHLKVVRA 416
Score = 62 (26.9 bits), Expect = 4.2e-11, Sum P(4) = 4.2e-11
Identities = 25/100 (25%), Positives = 45/100 (45%)
Query: 693 SVKSVNVVKYGDSNISTIQACEGNENTASAGVGQNL------TNDETNEKG---ERLEEV 743
+V+ +N ++ GD ++ ++A G A +G N T + E + L V
Sbjct: 397 AVQGLNGMELGDRHLKVVRASIGMTQAAGLDMGVNAMSMFAKTTSQDLESSRVLQLLNMV 456
Query: 744 TDHKSIKNNELE-ILNDSK-EVMEAGEVNNVKDNRPASGT 781
T + + N + E I +D + E + G V +K RP G+
Sbjct: 457 TPEELMDNEDYEEICDDVRDECSKFGRVLELKIPRPTGGS 496
Score = 61 (26.5 bits), Expect = 3.5e-14, Sum P(4) = 3.5e-14
Identities = 17/45 (37%), Positives = 21/45 (46%)
Query: 889 PNQGHIFEPGC--VFVEYMRAEASCMAAHSLHRRLFDDRIVAVEY 931
P G PG +FV++ EA+ A SL R F DR V Y
Sbjct: 492 PTGGSRQSPGVGKIFVKFETIEATTAALKSLAGRKFSDRTVVTTY 536
Score = 60 (26.2 bits), Expect = 3.5e-14, Sum P(4) = 3.5e-14
Identities = 23/104 (22%), Positives = 49/104 (47%)
Query: 149 RLKDRSPGNEKDRGNRGSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQSIVDSRDEA 208
R +D ++RG+RG + ++ SS+ +++ S R + + R +
Sbjct: 15 RPRDHYRDERRERGDRGERRRSRSPHYGSRSSRREAEADSY--SSSRDYRAREREDR-YS 71
Query: 209 TKKHSRDLTGKDRHADKSGEKSERESKRKHRNRD---DEKNRDK 249
+++ RD ++R + + +R S+R+ R+RD D RD+
Sbjct: 72 SRRDDRDYD-RERGDRRRRDYDDRPSRRE-RDRDLFEDRPRRDR 113
Score = 55 (24.4 bits), Expect = 1.1e-13, Sum P(4) = 1.1e-13
Identities = 22/89 (24%), Positives = 40/89 (44%)
Query: 163 NRGSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQSIVDSRDEA---TKKHSRDLTGK 219
+RG+D+ D ++ + + E+ + RS + SR EA + SRD +
Sbjct: 8 SRGADSGRPRDHYRDERRERGDRGER---RRSRSPHYGSRSSRREAEADSYSSSRDYRAR 64
Query: 220 DRHADKSGEKSERESKRKHRNRDDEKNRD 248
+R S + +R+ R+ R D + RD
Sbjct: 65 EREDRYSSRRDDRDYDRE---RGDRRRRD 90
Score = 51 (23.0 bits), Expect = 2.8e-13, Sum P(4) = 2.8e-13
Identities = 21/90 (23%), Positives = 40/90 (44%)
Query: 103 KKEDNALTKNVDSSRQRDGENRDLETKLKEDYVAKSNHRRTLKSEIRLKDRSP----GNE 158
++ED ++ D R D E D + +D ++ R L + +DR G+
Sbjct: 65 EREDRYSSRRDD--RDYDRERGDRRRRDYDDRPSRRERDRDLFEDRPRRDRGDRERGGDR 122
Query: 159 KDRGNRGSDTKLKADVTKETSSKPNVKSEK 188
+DR S ++ K + T + + P+V + K
Sbjct: 123 RDRKRSPSPSR-KREPTPDLTDVPSVLTRK 151
Score = 43 (20.2 bits), Expect = 1.7e-12, Sum P(4) = 1.7e-12
Identities = 26/130 (20%), Positives = 50/130 (38%)
Query: 114 DSSRQRDGENRDLETKLKEDYVAKSNHRRTLKSEIRLKDRSPGNEKDRGNRGSDTKLKAD 173
D R+R G+ + Y ++S+ RR +++ R ++R +R S + D
Sbjct: 22 DERRER-GDRGERRRSRSPHYGSRSS-RREAEADSYSSSRDY-RAREREDRYSSRRDDRD 78
Query: 174 VTKETSSKPNVKSEKLIPSQGRSHNQSIVDSRDEATKKHSRDLTGKDRHADKSGEKSERE 233
+E + + PS+ R ++ + + R RD ++R D+ K
Sbjct: 79 YDRERGDRRRRDYDDR-PSR-RERDRDLFEDRPR------RDRGDRERGGDRRDRKRSPS 130
Query: 234 SKRKHRNRDD 243
RK D
Sbjct: 131 PSRKREPTPD 140
>GENEDB_PFALCIPARUM|PF14_0656 [details] [associations]
symbol:PF14_0656 "U2 snRNP auxiliary factor,
putative" species:5833 "Plasmodium falciparum" [GO:0000398 "mRNA
splicing, via spliceosome" evidence=ISS] InterPro:IPR000504
InterPro:IPR006529 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005634 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003723 EMBL:AE014187 GO:GO:0000398 HSSP:P26368 KO:K12837
TIGRFAMs:TIGR01642 RefSeq:XP_001348830.1 ProteinModelPortal:Q8IKE9
IntAct:Q8IKE9 MINT:MINT-1638107 EnsemblProtists:PF14_0656:mRNA
GeneID:812238 KEGG:pfa:PF14_0656 EuPathDB:PlasmoDB:PF3D7_1468800
HOGENOM:HOG000212579 OMA:EYDERYQ ProtClustDB:CLSZ2515245
Uniprot:Q8IKE9
Length = 833
Score = 133 (51.9 bits), Expect = 1.4e-10, Sum P(3) = 1.4e-10
Identities = 68/293 (23%), Positives = 127/293 (43%)
Query: 309 QKRTSYYD-REHEGLPSHSTKISSGRQHSDIDSSRVTGNGLSGHYRRHDG-STSGLGGYS 366
++R+ Y D R+ HS ISS +H + R T S H D S+S +
Sbjct: 313 RRRSRYKDSRDRNKFSYHSRSISSDEEHYSKNKKR-TKRRKSRHNIDKDSYSSSSNSTHR 371
Query: 367 PRKRRTEAAAKTPSPINRSPEKK--SAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSS 424
R R++ ++ T N S +KK +KWD V+ + +N+ N + S + SS
Sbjct: 372 RRNRKSSSSNNTRKDDNNSIQKKRKKSKWDT--VDECLLNNNL--LNNSVSGIFQK--SS 425
Query: 425 DPVTSTTQKPLAGISVSASLAKLNVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFL 484
VT +A + L++ D+ ++ R+L + N+P ++ ++ +++F
Sbjct: 426 LTVTGNL---IAQNNKITDLSRNPYEQDT------DKKQRKLYIGNIPPNSKQEDVVDFF 476
Query: 485 NNFLLS----SGVQHVHGS---LPCIGCVIQREKGQ-AFVEFLTAEDASAALCCDGCSFS 536
NN +L+ S + G +P I C I + F+EF T + L D ++
Sbjct: 477 NNSILAVIKDSSLDVKIGDVQLMPVIKCEIFNSDSRFCFLEFRTVQITWLCLKLDSIPYN 536
Query: 537 GSILKIKRPKEFVEVAIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHE 589
L+I RP +++ + T+ + + M++ P K + + + D E
Sbjct: 537 NYCLRIGRPHDYIPPPEGDPAFT-TVFTDINMDVFEKLRPSKPVNVKTSSDEE 588
Score = 106 (42.4 bits), Expect = 1.4e-10, Sum P(3) = 1.4e-10
Identities = 32/167 (19%), Positives = 82/167 (49%)
Query: 89 DVHTSEEYVKVGSGKKEDNALTKNVDSSRQRDGENRDLETKLKEDYVAKSNHR--RTLKS 146
D+ +EE ++ + KK ++ K + D E++ ++ K ++ + K + + +
Sbjct: 134 DLECNEE--RIHNDKKMNHCHDKEQNEKENEDKESKQIDIKEVKNSIEKIKEKFGKNVDE 191
Query: 147 EIRLKDRSPGNEKDRGNRGSDTKLKADVTKETSSKPNVKSEKLIPSQG--RSHNQSIVDS 204
+IR ++ S +KD + + T + ++ S N ++ + + H+ S +
Sbjct: 192 KIR-RNESLDKKKDAHSVKNKTGNRNSTSRSRSRNRNRSKDRYLNKRKTIEVHSNSEENK 250
Query: 205 RDEA-TKKHSRDLTGKDRHADKSGEKSERESKRKHRNRDDEKNRDKS 250
+++ TK R + + + DK ++S+ +S+++ R+R E++R +S
Sbjct: 251 QEKRRTKSRERSIEYRKKSKDKWRDRSKEKSRQRSRDRSKERSRQRS 297
Score = 99 (39.9 bits), Expect = 6.9e-10, Sum P(3) = 6.9e-10
Identities = 42/164 (25%), Positives = 73/164 (44%)
Query: 91 HTSEEYVKVGSGKKEDNALTKNVDSS----RQRDGENRDLETKLKEDYVAKSNHRRTLKS 146
H E+ K K+ K V +S +++ G+N D + + E + K ++K+
Sbjct: 152 HDKEQNEKENEDKESKQIDIKEVKNSIEKIKEKFGKNVDEKIRRNES-LDKKKDAHSVKN 210
Query: 147 EIRLKDRSPGNEKDRGNRGSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQSIVDSRD 206
+ ++ + + NR D L T E S N + K + +S +SI
Sbjct: 211 KTGNRNSTSRSRSRNRNRSKDRYLNKRKTIEVHS--NSEENKQEKRRTKSRERSI----- 263
Query: 207 EATKKHSRDLTGKDRHADKSGEKSERESKRKHRNRDDEKNRDKS 250
E KK S+D +DR +KS ++S SK + R R ++ RD+S
Sbjct: 264 EYRKK-SKD-KWRDRSKEKSRQRSRDRSKERSRQRSRDRWRDRS 305
Score = 99 (39.9 bits), Expect = 6.9e-10, Sum P(3) = 6.9e-10
Identities = 42/169 (24%), Positives = 77/169 (45%)
Query: 95 EYVKVGSGKKE--DNALTKNVD----SSRQRDGENRDLETKLKEDYVAKSNHRRTLKSEI 148
E++ + KKE + L N + + +++ K ED +K + +K+ I
Sbjct: 119 EFISSNNKKKEKYEKDLECNEERIHNDKKMNHCHDKEQNEKENEDKESKQIDIKEVKNSI 178
Query: 149 -RLKDRSPGN--EKDRGNRGSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQSIVDSR 205
++K++ N EK R N D K A K + N S ++ RS ++ + ++
Sbjct: 179 EKIKEKFGKNVDEKIRRNESLDKKKDAHSVKNKTGNRNSTSRSRSRNRNRSKDRYL--NK 236
Query: 206 DEATKKHSRDLTGK-DRHADKSGEKS---ERESKRKHRNRDDEKNRDKS 250
+ + HS K ++ KS E+S ++SK K R+R EK+R +S
Sbjct: 237 RKTIEVHSNSEENKQEKRRTKSRERSIEYRKKSKDKWRDRSKEKSRQRS 285
Score = 99 (39.9 bits), Expect = 4.8e-07, Sum P(3) = 4.8e-07
Identities = 30/118 (25%), Positives = 55/118 (46%)
Query: 550 EVAIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCAFIEYVDQLVTPKAI 607
E ++I + L + + +++ FG LKA++ ++N + F EY D T AI
Sbjct: 588 ENRLYIQNLPHDLKDEQIKDLLEQFGDLKAFNIIKDLNTGLNKGYGFFEYEDSSCTQLAI 647
Query: 608 AGLNGLKVGGQVLTAVQAVLDG---SIMDNSG----NPPFHGIPKHA-LPLLKKPTEV 657
LNG G +L +A + +I N+ NP F +P ++ +P+ P+ +
Sbjct: 648 HALNGFVCGQNILNVKKATFNKQPTTITTNNNMNNQNPNFIALPNNSDVPVTLLPSSI 705
Score = 93 (37.8 bits), Expect = 6.7e-06, Sum P(4) = 6.7e-06
Identities = 39/153 (25%), Positives = 61/153 (39%)
Query: 97 VKVGSGKKEDNALTKNVDSSRQRDGENRDLETKLKEDYVAKSNHRRTLKSEIRLKDRSPG 156
++V S E+N K SR+R E R K K+ + +S + +S R K+RS
Sbjct: 240 IEVHSNS-EENKQEKRRTKSRERSIEYRK---KSKDKWRDRSKEKSRQRSRDRSKERSRQ 295
Query: 157 NEKDRGNRGSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQSIVDSRDEATKKHSRDL 216
+DR S + D + + K + K H++SI + +K R
Sbjct: 296 RSRDRWRDRSRDRWGLD-RRRSRYKDSRDRNKF-----SYHSRSISSDEEHYSKNKKRTK 349
Query: 217 TGKDRH-ADKSGEKSERESKRKHRNRDDEKNRD 248
K RH DK S S + RNR + +
Sbjct: 350 RRKSRHNIDKDSYSSSSNSTHRRRNRKSSSSNN 382
Score = 90 (36.7 bits), Expect = 2.0e-05, Sum P(3) = 2.0e-05
Identities = 43/223 (19%), Positives = 91/223 (40%)
Query: 43 KTKNLSENIKEDA--MDVSNIPGDCTIENVXXXXXXXXXXXXXXXPGVDVHTSEEYVKVG 100
K +N EN +++ +D+ + +IE + +D VK
Sbjct: 154 KEQNEKENEDKESKQIDIKEVKN--SIEKIKEKFGKNVDEKIRRNESLDKKKDAHSVKNK 211
Query: 101 SGKKEDNALTKNVDSSRQRD---GENRDLETKLKEDYVAKSNHRRTLKSEIRLKDRSPGN 157
+G + + +++ + +R +D + + +E + K RRT E ++ R
Sbjct: 212 TGNRNSTSRSRSRNRNRSKDRYLNKRKTIEVHSNSEE-NKQEKRRTKSRERSIEYRKKSK 270
Query: 158 EK--DRGNRGSDTKLKADVTKETSSKPNVKS--EKLIPSQGRSHNQS-IVDSRDEAT-KK 211
+K DR S + + D +KE S + + ++ G +S DSRD
Sbjct: 271 DKWRDRSKEKSRQRSR-DRSKERSRQRSRDRWRDRSRDRWGLDRRRSRYKDSRDRNKFSY 329
Query: 212 HSRDLTGKDRHADKSGEKSERESKRKHRNRDDEKNRDKSAAKK 254
HSR ++ + H K+ ++++R R + ++D + S ++
Sbjct: 330 HSRSISSDEEHYSKNKKRTKRRKSRHNIDKDSYSSSSNSTHRR 372
Score = 84 (34.6 bits), Expect = 2.2e-08, Sum P(3) = 2.2e-08
Identities = 48/184 (26%), Positives = 76/184 (41%)
Query: 89 DVHTSEEYVKVGSGKKEDNALTKNVDSSRQRDG-ENRDLETKLKEDYVAKSNHRRTLKSE 147
DV EE K KK D T+N DS ++ G N L K K+ L S
Sbjct: 16 DVSNIEENDKKNV-KKSD---TQNEDSEKKSTGTSNGMLSIKKKDTNETDKTDEYNLDSN 71
Query: 148 IRLKDRSPGNEKDRGNRGSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQSIVDSRDE 207
K +S +K N+ + + D+ K+ + V + I N+ + S ++
Sbjct: 72 --KKKKSFYQKKKTSNK--EIEEPKDILKDDTKDVIVDDDTNIKENDNLKNE-FISSNNK 126
Query: 208 ATKKHSRDLT-GKDR-HADKS------GEKSERESKRKHRNRDDEKNRDKSAAK-KVDLG 258
+K+ +DL ++R H DK E++E+E++ K + D K S K K G
Sbjct: 127 KKEKYEKDLECNEERIHNDKKMNHCHDKEQNEKENEDKESKQIDIKEVKNSIEKIKEKFG 186
Query: 259 KGHD 262
K D
Sbjct: 187 KNVD 190
Score = 68 (29.0 bits), Expect = 8.9e-07, Sum P(3) = 8.9e-07
Identities = 35/146 (23%), Positives = 58/146 (39%)
Query: 104 KEDNALTKNVDSSRQRDGENRDLETKLKEDYVAKSNHRRTLKSEIRLKDRSPGNEKDRGN 163
K N + +V + + D +N ED KS I+ KD + ++ D N
Sbjct: 9 KNSNCKS-DVSNIEENDKKNVKKSDTQNEDSEKKSTGTSNGMLSIKKKDTNETDKTDEYN 67
Query: 164 RGSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQSIVDSRDEATKKHSRDLTGKDRHA 223
S+ K K+ K+ +S ++ K I IVD D+ K + +L K+
Sbjct: 68 LDSNKKKKSFYQKKKTSNKEIEEPKDILKDDTK--DVIVD--DDTNIKENDNL--KNEFI 121
Query: 224 DKSGEKSERESKRKHRNRDDEKNRDK 249
+ +K E+ K N + N DK
Sbjct: 122 SSNNKKKEKYEKDLECNEERIHN-DK 146
Score = 45 (20.9 bits), Expect = 1.4e-10, Sum P(3) = 1.4e-10
Identities = 9/34 (26%), Positives = 17/34 (50%)
Query: 898 GCVFVEYMRAEASCMAAHSLHRRLFDDRIVAVEY 931
G +F+ Y + A + + RLF+ R+V +
Sbjct: 786 GKIFLHYADEATARKAQYMFNGRLFEKRVVCAAF 819
Score = 43 (20.2 bits), Expect = 6.7e-06, Sum P(4) = 6.7e-06
Identities = 11/37 (29%), Positives = 19/37 (51%)
Query: 21 DSNEGSAARTRPFSFDEIMIRRKTKNLSENIKEDAMD 57
+S S +R R S D + +RKT + N +E+ +
Sbjct: 216 NSTSRSRSRNRNRSKDRYLNKRKTIEVHSNSEENKQE 252
Score = 38 (18.4 bits), Expect = 6.9e-10, Sum P(3) = 6.9e-10
Identities = 13/49 (26%), Positives = 22/49 (44%)
Query: 887 QDPNQGHIFEPGCVFVEYMRAEASCMAAHSLHRRLFDDRIVAVEYIPLN 935
+D N G G F EY + + +A H+L+ + I+ V+ N
Sbjct: 622 KDLNTG--LNKGYGFFEYEDSSCTQLAIHALNGFVCGQNILNVKKATFN 668
>UNIPROTKB|Q8IKE9 [details] [associations]
symbol:PF14_0656 "U2 snRNP auxiliary factor, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0000398 "mRNA
splicing, via spliceosome" evidence=ISS] InterPro:IPR000504
InterPro:IPR006529 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005634 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003723 EMBL:AE014187 GO:GO:0000398 HSSP:P26368 KO:K12837
TIGRFAMs:TIGR01642 RefSeq:XP_001348830.1 ProteinModelPortal:Q8IKE9
IntAct:Q8IKE9 MINT:MINT-1638107 EnsemblProtists:PF14_0656:mRNA
GeneID:812238 KEGG:pfa:PF14_0656 EuPathDB:PlasmoDB:PF3D7_1468800
HOGENOM:HOG000212579 OMA:EYDERYQ ProtClustDB:CLSZ2515245
Uniprot:Q8IKE9
Length = 833
Score = 133 (51.9 bits), Expect = 1.4e-10, Sum P(3) = 1.4e-10
Identities = 68/293 (23%), Positives = 127/293 (43%)
Query: 309 QKRTSYYD-REHEGLPSHSTKISSGRQHSDIDSSRVTGNGLSGHYRRHDG-STSGLGGYS 366
++R+ Y D R+ HS ISS +H + R T S H D S+S +
Sbjct: 313 RRRSRYKDSRDRNKFSYHSRSISSDEEHYSKNKKR-TKRRKSRHNIDKDSYSSSSNSTHR 371
Query: 367 PRKRRTEAAAKTPSPINRSPEKK--SAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSS 424
R R++ ++ T N S +KK +KWD V+ + +N+ N + S + SS
Sbjct: 372 RRNRKSSSSNNTRKDDNNSIQKKRKKSKWDT--VDECLLNNNL--LNNSVSGIFQK--SS 425
Query: 425 DPVTSTTQKPLAGISVSASLAKLNVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFL 484
VT +A + L++ D+ ++ R+L + N+P ++ ++ +++F
Sbjct: 426 LTVTGNL---IAQNNKITDLSRNPYEQDT------DKKQRKLYIGNIPPNSKQEDVVDFF 476
Query: 485 NNFLLS----SGVQHVHGS---LPCIGCVIQREKGQ-AFVEFLTAEDASAALCCDGCSFS 536
NN +L+ S + G +P I C I + F+EF T + L D ++
Sbjct: 477 NNSILAVIKDSSLDVKIGDVQLMPVIKCEIFNSDSRFCFLEFRTVQITWLCLKLDSIPYN 536
Query: 537 GSILKIKRPKEFVEVAIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHE 589
L+I RP +++ + T+ + + M++ P K + + + D E
Sbjct: 537 NYCLRIGRPHDYIPPPEGDPAFT-TVFTDINMDVFEKLRPSKPVNVKTSSDEE 588
Score = 106 (42.4 bits), Expect = 1.4e-10, Sum P(3) = 1.4e-10
Identities = 32/167 (19%), Positives = 82/167 (49%)
Query: 89 DVHTSEEYVKVGSGKKEDNALTKNVDSSRQRDGENRDLETKLKEDYVAKSNHR--RTLKS 146
D+ +EE ++ + KK ++ K + D E++ ++ K ++ + K + + +
Sbjct: 134 DLECNEE--RIHNDKKMNHCHDKEQNEKENEDKESKQIDIKEVKNSIEKIKEKFGKNVDE 191
Query: 147 EIRLKDRSPGNEKDRGNRGSDTKLKADVTKETSSKPNVKSEKLIPSQG--RSHNQSIVDS 204
+IR ++ S +KD + + T + ++ S N ++ + + H+ S +
Sbjct: 192 KIR-RNESLDKKKDAHSVKNKTGNRNSTSRSRSRNRNRSKDRYLNKRKTIEVHSNSEENK 250
Query: 205 RDEA-TKKHSRDLTGKDRHADKSGEKSERESKRKHRNRDDEKNRDKS 250
+++ TK R + + + DK ++S+ +S+++ R+R E++R +S
Sbjct: 251 QEKRRTKSRERSIEYRKKSKDKWRDRSKEKSRQRSRDRSKERSRQRS 297
Score = 99 (39.9 bits), Expect = 6.9e-10, Sum P(3) = 6.9e-10
Identities = 42/164 (25%), Positives = 73/164 (44%)
Query: 91 HTSEEYVKVGSGKKEDNALTKNVDSS----RQRDGENRDLETKLKEDYVAKSNHRRTLKS 146
H E+ K K+ K V +S +++ G+N D + + E + K ++K+
Sbjct: 152 HDKEQNEKENEDKESKQIDIKEVKNSIEKIKEKFGKNVDEKIRRNES-LDKKKDAHSVKN 210
Query: 147 EIRLKDRSPGNEKDRGNRGSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQSIVDSRD 206
+ ++ + + NR D L T E S N + K + +S +SI
Sbjct: 211 KTGNRNSTSRSRSRNRNRSKDRYLNKRKTIEVHS--NSEENKQEKRRTKSRERSI----- 263
Query: 207 EATKKHSRDLTGKDRHADKSGEKSERESKRKHRNRDDEKNRDKS 250
E KK S+D +DR +KS ++S SK + R R ++ RD+S
Sbjct: 264 EYRKK-SKD-KWRDRSKEKSRQRSRDRSKERSRQRSRDRWRDRS 305
Score = 99 (39.9 bits), Expect = 6.9e-10, Sum P(3) = 6.9e-10
Identities = 42/169 (24%), Positives = 77/169 (45%)
Query: 95 EYVKVGSGKKE--DNALTKNVD----SSRQRDGENRDLETKLKEDYVAKSNHRRTLKSEI 148
E++ + KKE + L N + + +++ K ED +K + +K+ I
Sbjct: 119 EFISSNNKKKEKYEKDLECNEERIHNDKKMNHCHDKEQNEKENEDKESKQIDIKEVKNSI 178
Query: 149 -RLKDRSPGN--EKDRGNRGSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQSIVDSR 205
++K++ N EK R N D K A K + N S ++ RS ++ + ++
Sbjct: 179 EKIKEKFGKNVDEKIRRNESLDKKKDAHSVKNKTGNRNSTSRSRSRNRNRSKDRYL--NK 236
Query: 206 DEATKKHSRDLTGK-DRHADKSGEKS---ERESKRKHRNRDDEKNRDKS 250
+ + HS K ++ KS E+S ++SK K R+R EK+R +S
Sbjct: 237 RKTIEVHSNSEENKQEKRRTKSRERSIEYRKKSKDKWRDRSKEKSRQRS 285
Score = 99 (39.9 bits), Expect = 4.8e-07, Sum P(3) = 4.8e-07
Identities = 30/118 (25%), Positives = 55/118 (46%)
Query: 550 EVAIFIGGISRTLSSKMVMEIVCAFGPLKAYHF--EVNEDHEEPCAFIEYVDQLVTPKAI 607
E ++I + L + + +++ FG LKA++ ++N + F EY D T AI
Sbjct: 588 ENRLYIQNLPHDLKDEQIKDLLEQFGDLKAFNIIKDLNTGLNKGYGFFEYEDSSCTQLAI 647
Query: 608 AGLNGLKVGGQVLTAVQAVLDG---SIMDNSG----NPPFHGIPKHA-LPLLKKPTEV 657
LNG G +L +A + +I N+ NP F +P ++ +P+ P+ +
Sbjct: 648 HALNGFVCGQNILNVKKATFNKQPTTITTNNNMNNQNPNFIALPNNSDVPVTLLPSSI 705
Score = 93 (37.8 bits), Expect = 6.7e-06, Sum P(4) = 6.7e-06
Identities = 39/153 (25%), Positives = 61/153 (39%)
Query: 97 VKVGSGKKEDNALTKNVDSSRQRDGENRDLETKLKEDYVAKSNHRRTLKSEIRLKDRSPG 156
++V S E+N K SR+R E R K K+ + +S + +S R K+RS
Sbjct: 240 IEVHSNS-EENKQEKRRTKSRERSIEYRK---KSKDKWRDRSKEKSRQRSRDRSKERSRQ 295
Query: 157 NEKDRGNRGSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQSIVDSRDEATKKHSRDL 216
+DR S + D + + K + K H++SI + +K R
Sbjct: 296 RSRDRWRDRSRDRWGLD-RRRSRYKDSRDRNKF-----SYHSRSISSDEEHYSKNKKRTK 349
Query: 217 TGKDRH-ADKSGEKSERESKRKHRNRDDEKNRD 248
K RH DK S S + RNR + +
Sbjct: 350 RRKSRHNIDKDSYSSSSNSTHRRRNRKSSSSNN 382
Score = 90 (36.7 bits), Expect = 2.0e-05, Sum P(3) = 2.0e-05
Identities = 43/223 (19%), Positives = 91/223 (40%)
Query: 43 KTKNLSENIKEDA--MDVSNIPGDCTIENVXXXXXXXXXXXXXXXPGVDVHTSEEYVKVG 100
K +N EN +++ +D+ + +IE + +D VK
Sbjct: 154 KEQNEKENEDKESKQIDIKEVKN--SIEKIKEKFGKNVDEKIRRNESLDKKKDAHSVKNK 211
Query: 101 SGKKEDNALTKNVDSSRQRD---GENRDLETKLKEDYVAKSNHRRTLKSEIRLKDRSPGN 157
+G + + +++ + +R +D + + +E + K RRT E ++ R
Sbjct: 212 TGNRNSTSRSRSRNRNRSKDRYLNKRKTIEVHSNSEE-NKQEKRRTKSRERSIEYRKKSK 270
Query: 158 EK--DRGNRGSDTKLKADVTKETSSKPNVKS--EKLIPSQGRSHNQS-IVDSRDEAT-KK 211
+K DR S + + D +KE S + + ++ G +S DSRD
Sbjct: 271 DKWRDRSKEKSRQRSR-DRSKERSRQRSRDRWRDRSRDRWGLDRRRSRYKDSRDRNKFSY 329
Query: 212 HSRDLTGKDRHADKSGEKSERESKRKHRNRDDEKNRDKSAAKK 254
HSR ++ + H K+ ++++R R + ++D + S ++
Sbjct: 330 HSRSISSDEEHYSKNKKRTKRRKSRHNIDKDSYSSSSNSTHRR 372
Score = 84 (34.6 bits), Expect = 2.2e-08, Sum P(3) = 2.2e-08
Identities = 48/184 (26%), Positives = 76/184 (41%)
Query: 89 DVHTSEEYVKVGSGKKEDNALTKNVDSSRQRDG-ENRDLETKLKEDYVAKSNHRRTLKSE 147
DV EE K KK D T+N DS ++ G N L K K+ L S
Sbjct: 16 DVSNIEENDKKNV-KKSD---TQNEDSEKKSTGTSNGMLSIKKKDTNETDKTDEYNLDSN 71
Query: 148 IRLKDRSPGNEKDRGNRGSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQSIVDSRDE 207
K +S +K N+ + + D+ K+ + V + I N+ + S ++
Sbjct: 72 --KKKKSFYQKKKTSNK--EIEEPKDILKDDTKDVIVDDDTNIKENDNLKNE-FISSNNK 126
Query: 208 ATKKHSRDLT-GKDR-HADKS------GEKSERESKRKHRNRDDEKNRDKSAAK-KVDLG 258
+K+ +DL ++R H DK E++E+E++ K + D K S K K G
Sbjct: 127 KKEKYEKDLECNEERIHNDKKMNHCHDKEQNEKENEDKESKQIDIKEVKNSIEKIKEKFG 186
Query: 259 KGHD 262
K D
Sbjct: 187 KNVD 190
Score = 68 (29.0 bits), Expect = 8.9e-07, Sum P(3) = 8.9e-07
Identities = 35/146 (23%), Positives = 58/146 (39%)
Query: 104 KEDNALTKNVDSSRQRDGENRDLETKLKEDYVAKSNHRRTLKSEIRLKDRSPGNEKDRGN 163
K N + +V + + D +N ED KS I+ KD + ++ D N
Sbjct: 9 KNSNCKS-DVSNIEENDKKNVKKSDTQNEDSEKKSTGTSNGMLSIKKKDTNETDKTDEYN 67
Query: 164 RGSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQSIVDSRDEATKKHSRDLTGKDRHA 223
S+ K K+ K+ +S ++ K I IVD D+ K + +L K+
Sbjct: 68 LDSNKKKKSFYQKKKTSNKEIEEPKDILKDDTK--DVIVD--DDTNIKENDNL--KNEFI 121
Query: 224 DKSGEKSERESKRKHRNRDDEKNRDK 249
+ +K E+ K N + N DK
Sbjct: 122 SSNNKKKEKYEKDLECNEERIHN-DK 146
Score = 45 (20.9 bits), Expect = 1.4e-10, Sum P(3) = 1.4e-10
Identities = 9/34 (26%), Positives = 17/34 (50%)
Query: 898 GCVFVEYMRAEASCMAAHSLHRRLFDDRIVAVEY 931
G +F+ Y + A + + RLF+ R+V +
Sbjct: 786 GKIFLHYADEATARKAQYMFNGRLFEKRVVCAAF 819
Score = 43 (20.2 bits), Expect = 6.7e-06, Sum P(4) = 6.7e-06
Identities = 11/37 (29%), Positives = 19/37 (51%)
Query: 21 DSNEGSAARTRPFSFDEIMIRRKTKNLSENIKEDAMD 57
+S S +R R S D + +RKT + N +E+ +
Sbjct: 216 NSTSRSRSRNRNRSKDRYLNKRKTIEVHSNSEENKQE 252
Score = 38 (18.4 bits), Expect = 6.9e-10, Sum P(3) = 6.9e-10
Identities = 13/49 (26%), Positives = 22/49 (44%)
Query: 887 QDPNQGHIFEPGCVFVEYMRAEASCMAAHSLHRRLFDDRIVAVEYIPLN 935
+D N G G F EY + + +A H+L+ + I+ V+ N
Sbjct: 622 KDLNTG--LNKGYGFFEYEDSSCTQLAIHALNGFVCGQNILNVKKATFN 668
>TAIR|locus:2098443 [details] [associations]
symbol:AT3G28770 "AT3G28770" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0009827 "plant-type cell wall modification"
evidence=RCA] [GO:0009860 "pollen tube growth" evidence=RCA]
EMBL:CP002686 GenomeReviews:BA000014_GR HSSP:P01096 eggNOG:NOG12793
EMBL:AP002057 InterPro:IPR009605 Pfam:PF06746 IPI:IPI00529324
RefSeq:NP_189519.1 UniGene:At.42736 ProteinModelPortal:Q9LH98
PaxDb:Q9LH98 PRIDE:Q9LH98 EnsemblPlants:AT3G28770.1 GeneID:822509
KEGG:ath:AT3G28770 TAIR:At3g28770 OMA:SKNEILM
ProtClustDB:CLSN2912834 Genevestigator:Q9LH98 Uniprot:Q9LH98
Length = 2081
Score = 137 (53.3 bits), Expect = 4.2e-08, Sum P(2) = 4.2e-08
Identities = 39/169 (23%), Positives = 83/169 (49%)
Query: 90 VHTSEEYVKVGSGKKEDNALTKNVDSSRQRDGENRDLETKLKEDYVAKSNHRRTLKSE-I 148
++TS + + G KK+ +KN + ++ + + + +LK+ + N + T KSE
Sbjct: 933 INTSSK--QKGKDKKKKKKESKNSNMKKKEEDKKEYVNNELKKQ---EDNKKETTKSENS 987
Query: 149 RLKDRSPGNEKDRGNRGSDTK---LKADVTKETSSKPNVKSEKLIPSQGRSHNQSIVDSR 205
+LK+ + N++ + + S +K K K++ +K K EK + + + +
Sbjct: 988 KLKEENKDNKEKKESEDSASKNREKKEYEEKKSKTKEEAKKEKKKSQDKKREEKDSEERK 1047
Query: 206 DEATKKHSRDLTGKDRHADKSGEKSERESKRKHRNRDDEKNRDKSAAKK 254
+ K+ SRDL K + +++ EK E E+ + + D +++ D + KK
Sbjct: 1048 SKKEKEESRDLKAKKKE-EETKEKKESENHKSKKKEDKKEHEDNKSMKK 1095
Score = 127 (49.8 bits), Expect = 4.7e-07, Sum P(2) = 4.7e-07
Identities = 43/170 (25%), Positives = 83/170 (48%)
Query: 91 HTSEEYVKVGSGKKEDNALTKNVDS-SRQRDGENRDLETKLKEDYVAKSNHRRTLKSE-- 147
H + +K KKE K+ +S SR+++ + +D+E KL++ K + K +
Sbjct: 1087 HEDNKSMKKEEDKKEKK---KHEESKSRKKEEDKKDME-KLEDQNSNKKKEDKNEKKKSQ 1142
Query: 148 -IRL-KDRSPGNEKDRGNRGSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQSIVDSR 205
++L K S EK S+TK + + +K ++ + K +K Q + + + +S
Sbjct: 1143 HVKLVKKESDKKEKKENEEKSETK-EIESSKSQKNEVDKKEKKSSKDQQKKKEKEMKESE 1201
Query: 206 DEATKKHSRDLTGKDRHADKSGEKSERESKRKHRNRDDEKNRDK-SAAKK 254
++ KK+ D K + + + +K + K K++ +DD+KN K S KK
Sbjct: 1202 EKKLKKNEEDR--KKQTSVEENKKQKETKKEKNKPKDDKKNTTKQSGGKK 1249
Score = 122 (48.0 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 40/168 (23%), Positives = 74/168 (44%)
Query: 92 TSEEYVKVGSGKKEDNALTKNVDSSRQRDGENRDLE---TKLKEDYVAKSNHRRTLKSEI 148
T E K+ K DN K + S ++ E ++ E +K KE+ + + K E
Sbjct: 982 TKSENSKLKEENK-DNKEKKESEDSASKNREKKEYEEKKSKTKEEAKKEKKKSQDKKREE 1040
Query: 149 R-LKDRSPGNEKDRGNRGSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQSIVDSRDE 207
+ ++R EK+ +R K K + TKE N KS+K + N+S+ D+
Sbjct: 1041 KDSEERKSKKEKEE-SRDLKAKKKEEETKEKKESENHKSKKKEDKKEHEDNKSMKKEEDK 1099
Query: 208 ATKKHSRDLTGKDRHADKSGEKSERESKRKHRNRDDEKNRDKSAAKKV 255
KK + + + DK + + E + ++ ++D+ + KS K+
Sbjct: 1100 KEKKKHEESKSRKKEEDKK-DMEKLEDQNSNKKKEDKNEKKKSQHVKL 1146
Score = 121 (47.7 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 41/171 (23%), Positives = 77/171 (45%)
Query: 94 EEYVKVGSGKKEDNAL-TKNVDSSRQRDGENRD-LETKLKEDYVAKSNHRRTLKSEIRLK 151
+EYV K+EDN T ++S+ ++ EN+D E K ED +K+ ++ + + K
Sbjct: 964 KEYVNNELKKQEDNKKETTKSENSKLKE-ENKDNKEKKESEDSASKNREKKEYEEK---K 1019
Query: 152 DRSPGNEKDRGNRGSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQSIVDSRDEATKK 211
++ K + D K + ++E SK + + + ++ + + E+
Sbjct: 1020 SKTKEEAKKEKKKSQDKKREEKDSEERKSKKEKEESRDLKAKKKEEETK---EKKESENH 1076
Query: 212 HSRDLTGKDRHADKSGEKSERESKRKHRNRDDEKNRDKSAAKKVDLGKGHD 262
S+ K H D K E + K K ++ ++ K+R K KK D+ K D
Sbjct: 1077 KSKKKEDKKEHEDNKSMKKEEDKKEKKKH-EESKSRKKEEDKK-DMEKLED 1125
Score = 106 (42.4 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 37/153 (24%), Positives = 75/153 (49%)
Query: 102 GKKEDNALTKNVDSSRQRDGENRDLETKLKEDYVAKSNHRRTLKSEIRLKDRSPGNEKDR 161
G KE+N T N SS+Q+ +D + K KE SN ++ K E + + + +K
Sbjct: 924 GNKEENKDTINT-SSKQK---GKDKKKKKKES--KNSNMKK--KEEDKKEYVNNELKKQE 975
Query: 162 GNRGSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQSIVDSRDEATKKHSRDLTGKDR 221
N+ TK + KE +K N + ++ S ++ + + + TK+ ++ K++
Sbjct: 976 DNKKETTKSENSKLKE-ENKDNKEKKESEDSASKNREKKEYEEKKSKTKEEAK----KEK 1030
Query: 222 HADKSGEKSERESKRKHRNRDDEKNRDKSAAKK 254
+ ++ E++S+ + ++ E++RD A KK
Sbjct: 1031 KKSQDKKREEKDSEERKSKKEKEESRDLKAKKK 1063
Score = 106 (42.4 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 38/163 (23%), Positives = 72/163 (44%)
Query: 101 SGKKEDNALTKNVDSSRQRDGENRDLETKLKEDYVA-KSNHRRTLKSEIRLKDRSPGNEK 159
S KE N+D Q+ G ++ K E K ++ T+ + + K + +K
Sbjct: 890 SSTKEVRDFANNMDIDVQK-GSGESVKYKKDEKKEGNKEENKDTINTSSKQKGKDK-KKK 947
Query: 160 DRGNRGSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQSIVD-SRDEATKKHSRDLTG 218
+ ++ S+ K K + KE + K E +S N + + ++D KK S D
Sbjct: 948 KKESKNSNMKKKEEDKKEYVNNELKKQEDNKKETTKSENSKLKEENKDNKEKKESEDSAS 1007
Query: 219 KDR----HADKSGEKSERESKRKHRNRD---DEKNRDKSAAKK 254
K+R + +K + E K K +++D +EK+ ++ +KK
Sbjct: 1008 KNREKKEYEEKKSKTKEEAKKEKKKSQDKKREEKDSEERKSKK 1050
Score = 104 (41.7 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 35/145 (24%), Positives = 66/145 (45%)
Query: 108 ALTKNVDSSRQRDGENRDLETKLKEDYVAKSNHR--RTLKSEIRLKDRSPGNEKDRGNRG 165
A K ++ +++ EN ++K KED K H +++K E K++ E +
Sbjct: 1060 AKKKEEETKEKKESENH--KSKKKED---KKEHEDNKSMKKEEDKKEKKKHEESKSRKKE 1114
Query: 166 SDTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQSIVDSRDEATKKHSRDLTG-KDRHAD 224
D K D+ K N K E + H + + D+ KK + + + K+ +
Sbjct: 1115 EDKK---DMEKLEDQNSNKKKEDKNEKKKSQHVKLVKKESDKKEKKENEEKSETKEIESS 1171
Query: 225 KSGEKSERESKRKHRNRDDEKNRDK 249
KS +K+E + K K ++D +K ++K
Sbjct: 1172 KS-QKNEVDKKEKKSSKDQQKKKEK 1195
Score = 104 (41.7 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 34/173 (19%), Positives = 79/173 (45%)
Query: 93 SEEYVKVGSGKKE-DNALTKNVDSSRQRDGENRDLETKLKEDYVAKSNHRRTLKSEIRLK 151
SE+ KKE + +K + +++ +++D + + K+ KS + +++ K
Sbjct: 1002 SEDSASKNREKKEYEEKKSKTKEEAKKEKKKSQDKKREEKDSEERKSKKEKEESRDLKAK 1061
Query: 152 DRSPGNEKDRGNRGSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQSIVDSRDEATKK 211
+ ++ + + +K K D KE ++K E+ + + H +S ++E K
Sbjct: 1062 KKEEETKEKKESENHKSKKKED-KKEHEDNKSMKKEE-DKKEKKKHEESKSRKKEEDKKD 1119
Query: 212 HSR--DLTGKDRHADKSGEKSERESK--RKHRNRDDEK-NRDKSAAKKVDLGK 259
+ D + DK+ +K + K +K ++ ++K N +KS K+++ K
Sbjct: 1120 MEKLEDQNSNKKKEDKNEKKKSQHVKLVKKESDKKEKKENEEKSETKEIESSK 1172
Score = 103 (41.3 bits), Expect = 9.1e-06, Sum P(2) = 9.1e-06
Identities = 38/168 (22%), Positives = 78/168 (46%)
Query: 732 ETNEKGERLEEVTDHKSIKNNELEILNDSKEVMEAGEVNNVKDNRPASGTMG-DEPSQLC 790
+TNE R +E + K +E + KE +A V KDN+ S T DE +
Sbjct: 762 KTNENRVRNKEENVQGNKKESEKVEKGEKKESKDAKSVET-KDNKKLSSTENRDEAKERS 820
Query: 791 ----ELDTDMAVEYQARDSTSEIVSQGVPTQVNTLKDSPCAHDDKVTCNIQLEHMSEENK 846
+ D + + +YQ+ ++ + + GV T V +DS DD+ +++++ EE+
Sbjct: 821 GEDNKEDKEESKDYQSVEAKEKNENGGVDTNVGNKEDSKDLKDDR---SVEVKANKEESM 877
Query: 847 SSAKEDLNLEEVNGNSEAFTGASN-EMGMQSSAVENGDNENQDPNQGH 893
+E++ + + E A+N ++ +Q + E+ + + +G+
Sbjct: 878 KKKREEVQRNDKSSTKEVRDFANNMDIDVQKGSGESVKYKKDEKKEGN 925
Score = 103 (41.3 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 36/148 (24%), Positives = 72/148 (48%)
Query: 101 SGKKEDNALTKNVDSSRQRDGENRDLETKLKEDYVAKSNHRRTLKSEI-RLKDRSPGNEK 159
S KKED ++ D+ + E++ E K E+ +KS + K ++ +L+D++ +K
Sbjct: 1078 SKKKEDKK--EHEDNKSMKKEEDKK-EKKKHEE--SKSRKKEEDKKDMEKLEDQNSNKKK 1132
Query: 160 DRGNRGSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQSIVDSRDEATKKHSRDLTGK 219
+ N ++ V KE+ K ++E+ ++ ++S ++E KK + + K
Sbjct: 1133 EDKNEKKKSQHVKLVKKESDKKEKKENEEKSETKEIESSKS---QKNEVDKKEKK--SSK 1187
Query: 220 DRHADKSGEKSERESKRKHRNRDDEKNR 247
D+ K E E E K+ +N +D K +
Sbjct: 1188 DQQKKKEKEMKESEEKKLKKNEEDRKKQ 1215
Score = 103 (41.3 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 37/157 (23%), Positives = 65/157 (41%)
Query: 98 KVGSGKKEDNALTKNVDSSRQRDGENRDLETKLKEDYVAKSNHRRTLKSEIRLKDRSPGN 157
K KK + ++ S ++++ E+RDL+ K KE+ + KS+ + +D+
Sbjct: 1031 KKSQDKKREEKDSEERKSKKEKE-ESRDLKAKKKEEETKEKKESENHKSK-KKEDKKEHE 1088
Query: 158 EKDRGNRGSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQSIVDSRDEATKKHSRDLT 217
+ + D K K K SK K E + S D+ KK S+ +
Sbjct: 1089 DNKSMKKEEDKKEKK---KHEESKSRKKEEDKKDMEKLEDQNSNKKKEDKNEKKKSQHVK 1145
Query: 218 GKDRHADKSGEKSERESKRKHRNRDDEKNRDKSAAKK 254
+ +DK EK E E K + + + K++ KK
Sbjct: 1146 LVKKESDKK-EKKENEEKSETKEIESSKSQKNEVDKK 1181
Score = 103 (41.3 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 41/184 (22%), Positives = 85/184 (46%)
Query: 89 DVHTSEEYVKVGSGKKEDNALTKNVDSSRQRDGENRDLETKLKEDYVAKSNHRRTLKSEI 148
+V E+ KK++ + ++ + +++ E+R +T ++E+ K + K +
Sbjct: 1177 EVDKKEKKSSKDQQKKKEKEMKESEEKKLKKNEEDRKKQTSVEENKKQKETKKEKNKPKD 1236
Query: 149 RLKD--RSPGNEKDR---GNRGSDTKLKADVTKETSSKPNVKSEKLIP--SQGRSHNQSI 201
K+ + G +K+ ++ ++ + K+ T + S + K+E L+ SQ SH+ S
Sbjct: 1237 DKKNTTKQSGGKKESMESESKEAENQQKSQATTQADSDES-KNEILMQADSQADSHSDSQ 1295
Query: 202 VDSRDEATKK-----HSRDLTGKDRHADKSGEKSERESKRKHRNRDDEKNRDKSAAKKVD 256
DS DE+ + S+ T ++ D+ + S E+K K + +EKN+ K K
Sbjct: 1296 ADS-DESKNEILMQADSQATTQRNNEEDRKKQTSVAENK-KQKETKEEKNKPKDDKKNTT 1353
Query: 257 LGKG 260
G
Sbjct: 1354 KQSG 1357
Score = 98 (39.6 bits), Expect = 9.1e-06, Sum P(2) = 9.1e-06
Identities = 43/174 (24%), Positives = 83/174 (47%)
Query: 92 TSEEYVKVGSGKKED-NALTKNV-DSSRQRDGENRDLETKLKEDY-VAKSNHRRTLKSEI 148
++E Y+ + K E+ N +++ DS++ EN++ + K K D + N + E
Sbjct: 486 SNEVYMNKETTKGENVNIQGESIGDSTKDNSLENKE-DVKPKVDANESDGNSTKERHQEA 544
Query: 149 RLKDRSPGNEKDRGNRGSDTKLKADVTKE-TSSKPNVKSEKLIPSQGRSHNQSIVDSRDE 207
++ + +K+ N G+D + K D + E T++ + EK +QG +N V + +
Sbjct: 545 QVNNGVSTEDKNLDNIGADEQKKNDKSVEVTTNDGDHTKEKREETQG--NNGESVKNENL 602
Query: 208 ATKKHSRDLTGKDRHADKS-GEKSERESKRKHRNRDDEKNRDKSAAKKVDLGKG 260
K+ ++L KD D+S G K+ E+ + + +K D S K+ KG
Sbjct: 603 ENKEDKKEL--KD---DESVGAKTNNETSLEEKREQTQKGHDNSINSKIVDNKG 651
Score = 98 (39.6 bits), Expect = 0.00051, Sum P(2) = 0.00050
Identities = 38/163 (23%), Positives = 75/163 (46%)
Query: 103 KKEDNALTKNVDSSRQRDG--ENR-DLETKLKEDYVAKSNHRRTLKSEIRLKDRSPGNEK 159
+ E+ L KN + +++ EN+ ETK KE K + + T K K+ K
Sbjct: 1199 ESEEKKLKKNEEDRKKQTSVEENKKQKETK-KEKNKPKDDKKNTTKQSGGKKESMESESK 1257
Query: 160 DRGNRGSD---TKLKADVTK-ETSSKPNVKSEKLIPSQG---RSHNQSIVDSRDEATKKH 212
+ N+ T+ +D +K E + + +++ SQ S N+ ++ + +AT +
Sbjct: 1258 EAENQQKSQATTQADSDESKNEILMQADSQADSHSDSQADSDESKNEILMQADSQATTQR 1317
Query: 213 SRDLTGKDRHADKSGEKSERESKRKHRNRDDEKNRDK-SAAKK 254
+ + K + + +K + + K++ +DD+KN K S KK
Sbjct: 1318 NNEEDRKKQTSVAENKKQKETKEEKNKPKDDKKNTTKQSGGKK 1360
Score = 98 (39.6 bits), Expect = 0.00051, Sum P(2) = 0.00050
Identities = 35/171 (20%), Positives = 74/171 (43%)
Query: 94 EEYVKVGSGKKED--NALTKNVDSSRQ-RDGENRDLETKLKE--DYVAKSNHRRTLKSEI 148
+EY + S KE+ K+ D R+ +D E R + + +E D AK T + +
Sbjct: 1013 KEYEEKKSKTKEEAKKEKKKSQDKKREEKDSEERKSKKEKEESRDLKAKKKEEETKEKKE 1072
Query: 149 RLKDRSPGNEKDRGNRGSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQSIVDSRDEA 208
+S E + + + + K + KE KS K + + + + D
Sbjct: 1073 SENHKSKKKEDKKEHEDNKSMKKEEDKKEKKKHEESKSRK--KEEDKKDMEKLEDQNSNK 1130
Query: 209 TKKHSRDLTGKDRHADKSGEKSERESKRKHRNRDDEKNRDKSAAKKVDLGK 259
KK ++ K +H ++S+++ K+++ + + K + S ++K ++ K
Sbjct: 1131 -KKEDKNEKKKSQHVKLVKKESDKKEKKENEEKSETKEIESSKSQKNEVDK 1180
Score = 97 (39.2 bits), Expect = 0.00064, Sum P(2) = 0.00064
Identities = 49/180 (27%), Positives = 78/180 (43%)
Query: 94 EEYVKVGSGKKEDNALTKNV---DSSRQRDGENRDLETKLK--EDYVAKSNHRRTLKS-E 147
+E KV G+K+++ K+V D+ + ENRD E K + ED + +S E
Sbjct: 780 KESEKVEKGEKKESKDAKSVETKDNKKLSSTENRD-EAKERSGEDNKEDKEESKDYQSVE 838
Query: 148 IRLKDRSPGNEKDRGNRGSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQSIVDSRDE 207
+ K+ + G + + GN+ LK D + E VK+ K + + V D+
Sbjct: 839 AKEKNENGGVDTNVGNKEDSKDLKDDRSVE------VKANK---EESMKKKREEVQRNDK 889
Query: 208 ATKKHSRDLTGK-DRHADK-SGE-----KSERESKRKHRNRDD------EKNRDKSAAKK 254
++ K RD D K SGE K E++ K N+D +K +DK KK
Sbjct: 890 SSTKEVRDFANNMDIDVQKGSGESVKYKKDEKKEGNKEENKDTINTSSKQKGKDKKKKKK 949
Score = 97 (39.2 bits), Expect = 0.00064, Sum P(2) = 0.00064
Identities = 46/179 (25%), Positives = 83/179 (46%)
Query: 93 SEEYVKV--GSGKKEDNALTKNVDSSRQRDGENRDLETKLKEDYVA--KSNHRRTLKSEI 148
SE VK GS +K + N DS + EN++ +T K+D K + E
Sbjct: 681 SEVEVKKNDGSSEKGEEGKENNKDSMEDKKLENKESQTDSKDDKSVDDKQEEAQIYGGES 740
Query: 149 RLKDRS---PGNEKD-RGNRGSDTKLKADVTKETSSKPNVK-SEKLIPSQGR-SHNQSIV 202
+ D+S G +K+ + N+ + T KE + + N K SEK+ + + S + V
Sbjct: 741 K-DDKSVEAKGKKKESKENKKTKTNENRVRNKEENVQGNKKESEKVEKGEKKESKDAKSV 799
Query: 203 DSRDEATKKHSRDLTGKDRHADKSGEKSERESKRKHRNRDDEKNRDKSAAKKVDLGKGH 261
+++D KK S +D ++SGE + +E K + ++ + ++K+ VD G+
Sbjct: 800 ETKDN--KKLS-STENRDEAKERSGEDN-KEDKEESKDYQSVEAKEKNENGGVDTNVGN 854
Score = 94 (38.1 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 41/182 (22%), Positives = 82/182 (45%)
Query: 87 GVDVHTSEEYVKVGSGKKED----NALTKNVDSSRQRDGENRDL--ETKLKEDYVAKSNH 140
GV + + GSG+ + NA T + D ++ E + E+ E+ K+ +
Sbjct: 383 GVSTNETMNSENKGSGESTNDKMVNATTNDEDHKKENKEETHENNGESVKGENLENKAGN 442
Query: 141 RRTLKSEIRLKDRSPGNEKDRGNRGSDTKLKADVTKETSSKPNVKSEKLI----PSQGRS 196
++K E L+++ GNE+ +GN + K + +KE + + +S ++ ++G +
Sbjct: 443 EESMKGE-NLENKV-GNEELKGNASVEAKTNNESSKEEKREESQRSNEVYMNKETTKGEN 500
Query: 197 HN---QSIVDSRDEATKKHSRDLTGK-DRHADKSGEKSERESKRKHRN--RDDEKNRDKS 250
N +SI DS + + ++ D+ K D + ER + + N ++KN D
Sbjct: 501 VNIQGESIGDSTKDNSLENKEDVKPKVDANESDGNSTKERHQEAQVNNGVSTEDKNLDNI 560
Query: 251 AA 252
A
Sbjct: 561 GA 562
Score = 93 (37.8 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 48/189 (25%), Positives = 76/189 (40%)
Query: 698 NVVKYGDSNISTIQACEGNENTASAGVGQNLTNDETNEKGERLEEVTDHKSIKNNELEIL 757
N V D N+ I A E +N S V N D T EK E + + +S+KN LE
Sbjct: 548 NGVSTEDKNLDNIGADEQKKNDKSVEVTTN-DGDHTKEKREETQG-NNGESVKNENLENK 605
Query: 758 NDSKEVMEAGEVNNVKDNRPASGTMGDEPSQLCELDT--DMAVEYQA--RDSTSEI-VSQ 812
D KE+ + V K N S E +Q ++ V+ + DS E V
Sbjct: 606 EDKKELKDDESVG-AKTNNETSLEEKREQTQKGHDNSINSKIVDNKGGNADSNKEKEVHV 664
Query: 813 GVPTQVNTLKDSPCAHDD-KVTCNIQLEHMSEENKSSAKEDLNLEEVNGNSEAFTGASNE 871
G T N ++ + +V N EE K + K+ + +++ N E+ T + ++
Sbjct: 665 GDSTNDNNMESKEDTKSEVEVKKNDGSSEKGEEGKENNKDSMEDKKLE-NKESQTDSKDD 723
Query: 872 MGMQSSAVE 880
+ E
Sbjct: 724 KSVDDKQEE 732
Score = 86 (35.3 bits), Expect = 4.2e-08, Sum P(2) = 4.2e-08
Identities = 50/195 (25%), Positives = 89/195 (45%)
Query: 714 EGNENTASAGVGQNLTNDETNEKGERLEEVTDHKSIKNNEL-EILNDSKEVMEAGE---- 768
EG EN+ G + D+ E+G +E + +S K+ ++ EI D + ME G
Sbjct: 1684 EGKENSTKEG-----SKDDKIEEGMEGKENSTKESSKDGKINEIHGDKEATMEEGSKDGG 1738
Query: 769 VNNV-KDNRPA-----SGTMGD---EPSQLCEL-DTDMAVEYQARDSTSEIVSQGVPTQV 818
N+ KD++ + +G D + S+ ++ + + E +D+ +EI QG +
Sbjct: 1739 TNSTGKDSKDSKSVEINGVKDDSLKDDSKNGDINEINNGKEDSVKDNVTEI--QGNDNSL 1796
Query: 819 -NTLKDSPCAHDDKVTCNIQLEHMSEENKSSAKEDLNLEEVNGNSEAFTGASNEMGMQSS 877
N+ P + DK+ N + + N A+ N + NG +E T SN + M +
Sbjct: 1797 TNSTSSEP--NGDKLDTN---KDSMKNNTMEAQGGSNGDSTNGETEE-TKESN-VSMNNQ 1849
Query: 878 AVEN-GDNENQDPNQ 891
+++ G NEN NQ
Sbjct: 1850 NMQDVGSNENSMNNQ 1864
Score = 84 (34.6 bits), Expect = 6.8e-08, Sum P(2) = 6.8e-08
Identities = 33/132 (25%), Positives = 60/132 (45%)
Query: 692 GSVKSVNVVKYGDSNISTIQACEGNENTASAGVGQNLTNDETNEKGERLEEVTDHKSIKN 751
G + +N K DS + +GN+N+ + N T+ E N G++L+ T+ S+KN
Sbjct: 1769 GDINEINNGKE-DSVKDNVTEIQGNDNSLT-----NSTSSEPN--GDKLD--TNKDSMKN 1818
Query: 752 NELEILNDSKEVMEAGEVNNVKDNRPASGTMGDEPSQLCELDTDMAVEYQARDSTSEIVS 811
N +E S GE K++ + M ++ Q + ++ Q + +I+S
Sbjct: 1819 NTMEAQGGSNGDSTNGETEETKESNVS---MNNQNMQDVG-SNENSMNNQTTGTGDDIIS 1874
Query: 812 QGVPTQVNTLKD 823
T+ NT K+
Sbjct: 1875 TTTDTESNTSKE 1886
Score = 79 (32.9 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 54/219 (24%), Positives = 99/219 (45%)
Query: 692 GSVKSVNVVKYGDSNISTIQACEGNEN--TASAGVGQNLTNDETNEKGERLEEVTDHKSI 749
GS K N+V+ +I+ EG+E+ T G+ L+ +E ++ G ++EE + K
Sbjct: 1633 GS-KDSNIVERNGGKEDSIK--EGSEDGKTVEINGGEELSTEEGSKDG-KIEEGKEGK-- 1686
Query: 750 KNNELEILNDSK--EVMEAGEVNNVKDNRPASGTM----GDEPSQLCELDTDMAVEYQAR 803
+N+ E D K E ME G+ N+ K++ G + GD+ + + E D +
Sbjct: 1687 ENSTKEGSKDDKIEEGME-GKENSTKESSK-DGKINEIHGDKEATMEEGSKDGGTNSTGK 1744
Query: 804 DSTSEIVSQGVPTQVNTLKDSPCAHDDKVTCNIQLEHMSEEN-KSSAKEDLNLEE--VNG 860
DS S+ V ++N +KD D K ++ + E++ K + E + N
Sbjct: 1745 DSKD---SKSV--EINGVKDDSLKDDSKNGDINEINNGKEDSVKDNVTEIQGNDNSLTNS 1799
Query: 861 NSEAFTGA---SNEMGMQSSAVE-----NGDNENQDPNQ 891
S G +N+ M+++ +E NGD+ N + +
Sbjct: 1800 TSSEPNGDKLDTNKDSMKNNTMEAQGGSNGDSTNGETEE 1838
Score = 78 (32.5 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 34/169 (20%), Positives = 72/169 (42%)
Query: 727 NLTNDETNEKGER-----LEEVTDHKSIKNNELEILNDSKEVMEAGEVNNVKDNRPASGT 781
N ++ NEK + +++ +D K K NE + +++KE+ + N D + +
Sbjct: 1129 NKKKEDKNEKKKSQHVKLVKKESDKKEKKENEEK--SETKEIESSKSQKNEVDKKEKKSS 1186
Query: 782 MGDEPSQLCEL--DTDMAVEYQARDSTSEIVSQGVPTQVNTLKDSPCAHDDKVTCNIQLE 839
+ + E+ + ++ D + + Q T K+ DDK Q
Sbjct: 1187 KDQQKKKEKEMKESEEKKLKKNEEDRKKQTSVEENKKQKETKKEKNKPKDDKKNTTKQSG 1246
Query: 840 HMSEENKSSAKEDLNLEEVNGNSEAFTGAS-NEMGMQSSAVENGDNENQ 887
E +S +KE N ++ ++A + S NE+ MQ+ + + +++Q
Sbjct: 1247 GKKESMESESKEAENQQKSQATTQADSDESKNEILMQADSQADSHSDSQ 1295
Score = 75 (31.5 bits), Expect = 5.7e-07, Sum P(2) = 5.7e-07
Identities = 44/210 (20%), Positives = 83/210 (39%)
Query: 703 GDSNISTIQACEGNENTASAGVGQNLTNDETNEKGE-RLEEVTDHKSIKNNELEILNDSK 761
GDS+ S + ++ A + + + +E + + + + TD KN L +
Sbjct: 1518 GDSDESKNEILMQADSQADSQTDSDESKNEILMQADSQADSQTDSDESKNEILMQADSQA 1577
Query: 762 EVMEAGEVNNVKDNRPASGTMGDEPSQLCELDTDMAVEYQARDS-TSEIVSQGVPTQVNT 820
++ E+ E N VK +G E S+ E+ +++D T+E + V T+ +
Sbjct: 1578 KIGESLEDNKVKGKEDNGDEVGKENSKTIEVK---GRHEESKDGKTNENGGKEVSTEEGS 1634
Query: 821 LKDSPCAHDDKVTCNIQLEHMSEENKSSAKEDLNLEEVNGNSEAFTGASNEMGMQSSAVE 880
KDS ++ E++ ED E+NG E T ++ G E
Sbjct: 1635 -KDSNI---------VERNGGKEDSIKEGSEDGKTVEINGGEELSTEEGSKDGKIEEGKE 1684
Query: 881 NGDNENQDPNQGHIFEPGCVFVEYMRAEAS 910
+N ++ ++ E G E E+S
Sbjct: 1685 GKENSTKEGSKDDKIEEGMEGKENSTKESS 1714
Score = 74 (31.1 bits), Expect = 7.2e-07, Sum P(2) = 7.2e-07
Identities = 33/160 (20%), Positives = 59/160 (36%)
Query: 732 ETNEKGERLEEVTDHKSIKNNELEILNDSKEVMEAG--EVNNVKDNRPASGTMGDEPSQL 789
E ++ E EE K K N E KE ME+ E N + ++ + DE
Sbjct: 1442 ENKKQKETKEEKNKPKDDKKNTTEQSGGKKESMESESKEAENQQKSQATTQGESDESKNE 1501
Query: 790 CELDTDMAVEYQARDSTSEIVSQG-VPTQVNTLKDSPCAHDDKVTCNIQLEHMSEENKSS 848
+ D + A S+ + Q ++ DS D+ + ++++
Sbjct: 1502 ILMQADSQADTHANSQGDSDESKNEILMQADSQADSQTDSDESKNEILMQADSQADSQTD 1561
Query: 849 AKEDLNLEEVNGNSEAFTGASNEMGMQSSAVENGDNENQD 888
+ E N + +S+A G S E +NGD ++
Sbjct: 1562 SDESKNEILMQADSQAKIGESLEDNKVKGKEDNGDEVGKE 1601
Score = 74 (31.1 bits), Expect = 7.2e-07, Sum P(2) = 7.2e-07
Identities = 42/169 (24%), Positives = 69/169 (40%)
Query: 732 ETNEKGERLEEVTDHKSIKNNELEILNDSKEVMEAG--EVNNVKDNRPASGTMGDEPSQ- 788
E ++ E EE K K N + KE ME+ E N + ++ + DE
Sbjct: 1331 ENKKQKETKEEKNKPKDDKKNTTKQSGGKKESMESESKEAENQQKSQATTQADSDESKNE 1390
Query: 789 -LCELDT--DMAVEYQAR--DSTSEIVSQGVPTQVNTLKDSPCAHDDKVTCNI-----QL 838
L + D+ D + QA +S +EI+ Q +Q T +++ D K ++ Q
Sbjct: 1391 ILMQADSQADSHSDSQADSDESKNEILMQA-DSQATTQRNNE--EDRKKQTSVAENKKQK 1447
Query: 839 EHMSEENKSSAKEDLNLEEVNGNSEAFTGASNEMGMQ--SSAVENGDNE 885
E E+NK + E+ G E+ S E Q S A G+++
Sbjct: 1448 ETKEEKNKPKDDKKNTTEQSGGKKESMESESKEAENQQKSQATTQGESD 1496
Score = 67 (28.6 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 44/205 (21%), Positives = 81/205 (39%)
Query: 695 KSVNVVKYGDSNISTIQACEGNENTASAGVGQNLTNDETNEKGERLEEVTDHKSIKNNEL 754
K N + G N TI+ +E + +N + + E+G + + + K + +
Sbjct: 1591 KEDNGDEVGKENSKTIEVKGRHEESKDGKTNENGGKEVSTEEGSKDSNIVERNGGKEDSI 1650
Query: 755 -EILNDSKEV-MEAGEVNNV----KDNRPASGTMGDEPSQLCELDTDMAVE--YQARD-S 805
E D K V + GE + KD + G G E S E D +E + ++ S
Sbjct: 1651 KEGSEDGKTVEINGGEELSTEEGSKDGKIEEGKEGKENSTK-EGSKDDKIEEGMEGKENS 1709
Query: 806 TSEIVSQGVPTQVNTLKDSPCAHDDKVTCNIQLEHMSEENKS----SAKED-LNLEEVNG 860
T E G +++ K++ K S+++KS K+D L + NG
Sbjct: 1710 TKESSKDGKINEIHGDKEATMEEGSKDGGTNSTGKDSKDSKSVEINGVKDDSLKDDSKNG 1769
Query: 861 N-SEAFTGASNEMGMQSSAVENGDN 884
+ +E G + + + ++ DN
Sbjct: 1770 DINEINNGKEDSVKDNVTEIQGNDN 1794
Score = 57 (25.1 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 26/116 (22%), Positives = 50/116 (43%)
Query: 700 VKYGDSNISTIQACEGNENTASAGVGQNLTNDETNEKGERLEEVT------DHKSIKNNE 753
V + N+ + + E + N + G G ++ + T+ + +EVT + KS E
Sbjct: 1844 VSMNNQNMQDVGSNENSMNNQTTGTGDDIISTTTDTESNTSKEVTSFISNLEEKSPGTQE 1903
Query: 754 LE-ILNDSKEVME-AGEVNNVKDNRPASGTMGDEPSQLCELDTDMAVEYQARDSTS 807
+ K+ M+ V++ + + + M + S +L MAV QA+ S S
Sbjct: 1904 FQSFFQKLKDYMKYLCPVSSTFEAKDSRSYMSEMISMATKLSDAMAV-LQAKKSGS 1958
Score = 52 (23.4 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 26/127 (20%), Positives = 57/127 (44%)
Query: 730 NDETNEKGERLEEVTDHKSIKNNELEILNDSKEVMEAGEVNNVKDNRPASGTMGDEPSQL 789
++++ +K E +E H+ K+ + E D K++ + + N+ K + + +L
Sbjct: 1089 DNKSMKKEEDKKEKKKHEESKSRKKE--EDKKDMEKLEDQNSNKKKEDKNEKKKSQHVKL 1146
Query: 790 CELDTDMAV--EYQARDSTSEIVSQGVPTQVNTL--KDSPCAHDDKVTCNIQLEHMSEEN 845
+ ++D E + + T EI S +Q N + K+ + D + +++ SEE
Sbjct: 1147 VKKESDKKEKKENEEKSETKEIESS--KSQKNEVDKKEKKSSKDQQKKKEKEMKE-SEEK 1203
Query: 846 KSSAKED 852
K E+
Sbjct: 1204 KLKKNEE 1210
Score = 51 (23.0 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 32/156 (20%), Positives = 58/156 (37%)
Query: 731 DETNEKGERLEEVTDHKSIKNNELEILNDSKEVMEAGEVNNVKDNRPASGTMGDEPSQLC 790
D K E L + + + N E D K+ E K+ + D+
Sbjct: 1297 DSDESKNEILMQADSQATTQRNNEE---DRKKQTSVAENKKQKETKEEKNKPKDDKKNTT 1353
Query: 791 ELDTDMAVEYQARDSTSEIVSQGVPTQVNTLKDSPCAHDDKVTCNIQLEHMSEENKSS-A 849
+ + ++ +S S+ +Q T DS + K +Q + ++ + S A
Sbjct: 1354 K---QSGGKKESMESESKEAENQQKSQATTQADSD---ESKNEILMQADSQADSHSDSQA 1407
Query: 850 KEDLNLEEV--NGNSEAFTGASNEMGM--QSSAVEN 881
D + E+ +S+A T +NE Q+S EN
Sbjct: 1408 DSDESKNEILMQADSQATTQRNNEEDRKKQTSVAEN 1443
>DICTYBASE|DDB_G0293562 [details] [associations]
symbol:DDB_G0293562 species:44689 "Dictyostelium
discoideum" [GO:0044351 "macropinocytosis" evidence=RCA]
dictyBase:DDB_G0293562 EMBL:AAFI02000218 eggNOG:NOG253936
InterPro:IPR014898 Pfam:PF08790 RefSeq:XP_629009.1
ProteinModelPortal:Q54BM0 EnsemblProtists:DDB0192009 GeneID:8629293
KEGG:ddi:DDB_G0293562 InParanoid:Q54BM0 OMA:ECASTVI
ProtClustDB:CLSZ2846558 Uniprot:Q54BM0
Length = 527
Score = 121 (47.7 bits), Expect = 5.3e-07, Sum P(2) = 5.3e-07
Identities = 46/208 (22%), Positives = 79/208 (37%)
Query: 45 KNLSENIKEDAMDVSNIPG-DCTIENVXXXXXXXXXXXXXXXPGVD-VHTSEEYVKVGSG 102
+ L EN KE+A + D + + + V T + KV S
Sbjct: 94 RKLEENKKEEAKKKKKVESSDSSDSSSSDSSSSESEDEKKKKKEIKKVETKKPIKKVESS 153
Query: 103 KKEDNALTKNVDSSRQRDGENRDLETKLKEDYVAKSNHRRTLKSEIRLKDRSPGNEKDRG 162
D+ + + ++ +N+ +ETK E ++ T K E D S +
Sbjct: 154 DSSDSDSSDSSSEDEKKKKDNKKVETKKVETKKVETKKVETKKEESSDSDSSDSDSSSSE 213
Query: 163 NRGSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQSIVDSRDEATKKHSRDLTGKDRH 222
+ D K K D K K +SE S+ S +++ D++ TKK D
Sbjct: 214 SESEDEKKKKDTKKVEIKKEESESES---SESESEDEN-KDNKKVGTKKEE----SSDSD 265
Query: 223 ADKSGEKSERESKRKHRNRDDEKNRDKS 250
+ S +SE E K+K+ + + K + S
Sbjct: 266 SSSSESESEDEKKKKNNKKVEAKKEESS 293
Score = 116 (45.9 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 44/166 (26%), Positives = 73/166 (43%)
Query: 98 KVGSGKKEDNALTKNVDSSRQRDGENRDLETKLKEDYVAKSNHRRTL--KSEIRLKDRSP 155
K+ KKE+ K V+SS D + D + ED K + + K I+ + S
Sbjct: 95 KLEENKKEEAKKKKKVESSDSSDSSSSDSSSSESEDEKKKKKEIKKVETKKPIKKVESSD 154
Query: 156 GNEKDRGNRGS-DTKLKAD----VTKETSSKPNVKSEKLIPSQGRSHNQSIVDSRDEATK 210
++ D + S D K K D TK+ +K V+++K+ + S + DS +++
Sbjct: 155 SSDSDSSDSSSEDEKKKKDNKKVETKKVETK-KVETKKVETKKEESSDSDSSDSDSSSSE 213
Query: 211 KHSRD-LTGKD-RHADKSGEKSERESKRKHRNRDDEKNRDKSAAKK 254
S D KD + + E+SE ES + D+ K+ K KK
Sbjct: 214 SESEDEKKKKDTKKVEIKKEESESESSESE-SEDENKDNKKVGTKK 258
Score = 104 (41.7 bits), Expect = 5.8e-05, Sum P(3) = 5.8e-05
Identities = 36/155 (23%), Positives = 70/155 (45%)
Query: 101 SGKKEDNALTKNVDSSRQRDGENRDLETKLKEDYVAKSNHRRTLKSEIRLKDRSPGNEKD 160
+G +N N +++ + N + + KL+E+ K ++ K ++ D S + D
Sbjct: 67 NGNNNNNKNNNNNNNNNNNNNNNNNNKRKLEEN--KKEEAKK--KKKVESSDSSDSSSSD 122
Query: 161 RGNRGSDT--KLKADVTKETSSKPNVKSEKLIPSQGRSHNQSIVDSRDEATKKHSRDLTG 218
+ S+ K K ++ K + KP K E S S + S S DE KK ++ +
Sbjct: 123 SSSSESEDEKKKKKEIKKVETKKPIKKVESSDSSDSDSSDSS---SEDEKKKKDNKKVET 179
Query: 219 KDRHADKSGEKSERESKRKHRNRDDEKNRDKSAAK 253
K + K E + E+K++ + D + D S+++
Sbjct: 180 K-KVETKKVETKKVETKKEESSDSDSSDSDSSSSE 213
Score = 102 (41.0 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 45/217 (20%), Positives = 88/217 (40%)
Query: 48 SENIKEDAMDVSNIPGDCTIENVXXXXXXXXXXXXXXXPGVDVHTSEEYVKVGSGKKEDN 107
SE+ K+ ++ + I+ V D ++ KV + K E
Sbjct: 128 SEDEKKKKKEIKKVETKKPIKKVESSDSSDSDSSDSSSE--DEKKKKDNKKVETKKVETK 185
Query: 108 AL-TKNVDSSRQR--DGENRDLETKLKEDYVAKSNHRR-TLKSEIRLKD-RSPGNEKDRG 162
+ TK V++ ++ D ++ D ++ E ++ T K EI+ ++ S +E +
Sbjct: 186 KVETKKVETKKEESSDSDSSDSDSSSSESESEDEKKKKDTKKVEIKKEESESESSESESE 245
Query: 163 NRGSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQSIVDSRDEATKKHSRDLTGKDRH 222
+ D K K KE SS + S + S+ + + + EA K+ S D +
Sbjct: 246 DENKDNK-KVGTKKEESSDSDSSSSE---SESEDEKKKKNNKKVEAKKEESSD---SESE 298
Query: 223 ADKSGEKSERESKRKHRNRDDEKNRDKSAAKKVDLGK 259
++ S S + + D++K +D +KKV+ K
Sbjct: 299 SESESSSSSSSSSSESESEDEKKKKD---SKKVETKK 332
Score = 86 (35.3 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 35/199 (17%), Positives = 77/199 (38%)
Query: 695 KSVNVVKY-GDSNISTIQACEGNENTASAGVGQNLTNDETNEKGERLEEVTDHKSIKNNE 753
K V + K +S S ++ + N++ G + ++D + E E D K KNN+
Sbjct: 226 KKVEIKKEESESESSESESEDENKDNKKVGTKKEESSDSDSSSSE--SESEDEKKKKNNK 283
Query: 754 -LEILNDSKEVMEAGEVNNVKDNRPASGTMGDEPSQLCELDTDMAVEYQARDSTSEIVSQ 812
+E + E+ + + +S + + + + D+ + S SE S+
Sbjct: 284 KVEAKKEESSDSESESESESSSSSSSSSSESESEDEKKKKDSKKVETKKEGSSDSESSSE 343
Query: 813 GVPTQVNTLKDSPCAHDDKVTCNIQLEHMSEENKSSAKEDLNLEEVNGNSEAFTGASNEM 872
V + ++ ++ S E+K K D+ EE + + + +E
Sbjct: 344 SVEDEKMDIEKVEIKKEESSDSESS-SPASSESKEEEKMDIEKEETKKEESSSSSSESEE 402
Query: 873 GMQSSAVENGDNENQDPNQ 891
+ S E+ D++ ++
Sbjct: 403 EQKKSKKEDSDSDESSEDE 421
Score = 78 (32.5 bits), Expect = 5.3e-07, Sum P(2) = 5.3e-07
Identities = 36/194 (18%), Positives = 85/194 (43%)
Query: 695 KSVNVVKYGDSNISTIQACEGNENTASAGVGQNLTNDETNEK-GERLEEVTDHKSIKNNE 753
K V K S+ + E + +++S+ ++ + DE +K +++E + S +
Sbjct: 283 KKVEAKKEESSDSESESESESSSSSSSSS-SESESEDEKKKKDSKKVETKKEGSSDSESS 341
Query: 754 LEILNDSKEVMEAGEVNNVKDNRPASGTMGDEPSQLCELDTDMAVEYQARDSTSEIVSQG 813
E + D K +E E+ + + S + S+ E D+ E ++ +S S+
Sbjct: 342 SESVEDEKMDIEKVEIKKEESSDSESSSPASSESKE-EEKMDIEKEETKKEESSSSSSES 400
Query: 814 VPTQVNTLKDSPCAHDDKVTCNIQLEHMSEENKSSAKEDLNLEEVNGNSEAFTGASNEMG 873
Q + K+ + D+ + + E EE+ SS++ + ++ + +SE+ +
Sbjct: 401 EEEQKKSKKED--SDSDESS---EDEKKKEESSSSSESEDEKKKEDSDSESSEDEKKKED 455
Query: 874 MQSSAVENGDNENQ 887
SS+ ++E++
Sbjct: 456 SDSSSSSESEDEDK 469
Score = 74 (31.1 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 35/177 (19%), Positives = 81/177 (45%)
Query: 714 EGNENTASAGVGQNLTNDETN-EKGE-RLEEVTDHKSIKNNELEILNDSKEVMEAGEVNN 771
EG+ ++ S+ +++ +++ + EK E + EE +D +S E + K +E E
Sbjct: 333 EGSSDSESSS--ESVEDEKMDIEKVEIKKEESSDSESSSPASSESKEEEKMDIEKEETKK 390
Query: 772 VKDNRPASGTMGDEP-SQLCELDTDMAVEYQARDSTSEIVSQGVPTQVNTLKDSPCAHDD 830
+ + +S + ++ S+ + D+D + E + + S S+ + DS + D+
Sbjct: 391 EESSSSSSESEEEQKKSKKEDSDSDESSEDEKKKEESSSSSESEDEKKKEDSDSESSEDE 450
Query: 831 KVTCNIQLEHMSE-ENKSSAKEDLNLEEVNGNSEAFTGASNEMGMQSSAVENGDNEN 886
K + SE E++ K+D + E E+ + +S+ SS+ ++ + +
Sbjct: 451 KKKEDSDSSSSSESEDEDKKKKDSSSSESESEKESDSSSSSSESDSSSSSDSDSSSS 507
Score = 57 (25.1 bits), Expect = 7.5e-05, Sum P(2) = 7.5e-05
Identities = 35/177 (19%), Positives = 73/177 (41%)
Query: 714 EGNENTASAGVGQNLTNDETN--EKGERLEEVTDHKSIKNNELEILNDSKEVMEAGEVNN 771
E +++ +S+ +E EK E +E + S ++ E E KE ++ E +
Sbjct: 361 ESSDSESSSPASSESKEEEKMDIEKEETKKEESSSSSSESEE-EQKKSKKEDSDSDESSE 419
Query: 772 VKDNRPASGTMGDEPSQLCELDTDMAV---EYQARDSTSEIVSQGVPTQVNTLKDSPCAH 828
+ + S + + + + D+D E + DS S S+ + KDS +
Sbjct: 420 DEKKKEESSSSSESEDEKKKEDSDSESSEDEKKKEDSDSSSSSES-EDEDKKKKDSSSSE 478
Query: 829 DDKVTCNIQLEHMSEENKSSAKEDLNLEEVNGNSEAFTGASNEMGMQSSAVENGDNE 885
+ E S+ + SS++ D + + +S + + +S+ S E+ D+E
Sbjct: 479 SES-------EKESDSSSSSSESDSSSSSDSDSSSSSSSSSSSSSSSESESES-DSE 527
Score = 54 (24.1 bits), Expect = 1.4e-05, Sum P(3) = 1.4e-05
Identities = 29/133 (21%), Positives = 47/133 (35%)
Query: 312 TSYYDREHEGLPSHSTKISSGRQHSDIDSSRVTGNGLSGHYRRHDGSTSGLGGYSPRKRR 371
+S + E E ++ K+ + ++ S S S S S ++
Sbjct: 268 SSESESEDEKKKKNNKKVEAKKEESSDSESESESESSSSSSSSSSESESEDEKKKKDSKK 327
Query: 372 TEAAAKTPSPINRSPEK-KSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTST 430
E + S S E + K D+ VE S+ S+ ASS + E D
Sbjct: 328 VETKKEGSSDSESSSESVEDEKMDIEKVEIKKEESSDSESSSPASSESKEEEKMDIEKEE 387
Query: 431 TQKPLAGISVSAS 443
T+K + S S S
Sbjct: 388 TKKEESSSSSSES 400
Score = 52 (23.4 bits), Expect = 1.4e-05, Sum P(3) = 1.4e-05
Identities = 20/105 (19%), Positives = 47/105 (44%)
Query: 704 DSNISTIQACEGNENTASA-GVGQNLTNDETNEKGERLEEVTDHKSIKNNELEILNDSKE 762
DS+ S+ + E+++S+ + D +E E ++ D S ++E E + K+
Sbjct: 413 DSDESSEDEKKKEESSSSSESEDEKKKEDSDSESSEDEKKKEDSDSSSSSESEDEDKKKK 472
Query: 763 VMEAGEVNNVKDNRPASGTMGDEPSQLCELDTDMAVEYQARDSTS 807
+ E + K++ +S + + S + D+ + + S+S
Sbjct: 473 DSSSSESESEKESDSSSSSSESDSSSSSDSDSSSSSSSSSSSSSS 517
Score = 44 (20.5 bits), Expect = 5.8e-05, Sum P(3) = 5.8e-05
Identities = 25/141 (17%), Positives = 53/141 (37%)
Query: 312 TSYYDREHEGLPSHSTKISSGRQHSDIDSSRVTGNGLSGHYRRHDGSTSGLGGYSPRKRR 371
+S + E E + K+ ++ S+ +SS + ++
Sbjct: 211 SSESESEDEKKKKDTKKVEIKKEESESESSESESEDENKDNKKVGTKKEESSDSDSSSSE 270
Query: 372 TEAAAKTPSPINRSPEKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTT 431
+E+ + N+ E K + + E+ S S+ +S+ + S + E D T
Sbjct: 271 SESEDEKKKKNNKKVEAKKEESSDSESESESESSSSSSSSSSESESEDEKKKKDSKKVET 330
Query: 432 QKPLAGISVSASLAKLNVSMD 452
+K + S S+S + + MD
Sbjct: 331 KKEGSSDSESSSESVEDEKMD 351
>UNIPROTKB|E2QVN0 [details] [associations]
symbol:ANKRD12 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR002110 Pfam:PF00023
PRINTS:PR01415 PROSITE:PS50088 SMART:SM00248 GO:GO:0005634
GO:GO:0005737 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 CTD:23253 OMA:YSSERAN
GeneTree:ENSGT00550000074487 EMBL:AAEX03005503 RefSeq:XP_537329.2
Ensembl:ENSCAFT00000029672 GeneID:480205 KEGG:cfa:480205
NextBio:20855261 Uniprot:E2QVN0
Length = 2061
Score = 135 (52.6 bits), Expect = 3.5e-07, Sum P(3) = 3.5e-07
Identities = 57/245 (23%), Positives = 107/245 (43%)
Query: 16 EPSLAD---SNEGSAARTRPFSFDEIMIRRKTKNL--SENIKEDAMDVSNIPGDCTIE-- 68
E S+ D + E ++ R F + I+++++ E IK+ + NIP + E
Sbjct: 726 EKSIKDDKSTKEKHVSKERNFKEEREKIKKESEKSFREEKIKDLKEERENIPIEKETECG 785
Query: 69 NVXXXXXXXXXXXXXXXPGVDVHTSEEYVKVGSGKKEDNALTKNVDSSRQRDGENRDLET 128
++ +++ E+Y+K K E TK D + + +N + E
Sbjct: 786 SLGTNASEESIGLHSMEKEIEMEKQEKYIKESKEKSERRFQTKEKDVEKT-ERKNSEKEK 844
Query: 129 KLKEDYVAKSNHRRTLKSEIRLKDRSPGNEKDRGNRGSDTKLKADVTKETSSKPNVKSEK 188
K+K ++ ++ + ++KD+ + +R ++ S+ KLK T+ K N EK
Sbjct: 845 KIKHEHKSEKDKLDLSDCVDKIKDKLYSHHTERCHKESE-KLK----NITTVKKNDDREK 899
Query: 189 LIPSQGRSHNQSIVDS-RDEATKKHSRDLTGKDRHADKSGEKSERESKRKHRNRD-D--E 244
R H++ + R A K + K++ AD S +SK K ++R+ D E
Sbjct: 900 SREKMDRKHDKEKPEKDRHLAESKEKHLIEKKNKAADSSDYTKSEKSKNKEKDREVDKKE 959
Query: 245 KNRDK 249
K+RDK
Sbjct: 960 KSRDK 964
Score = 122 (48.0 bits), Expect = 7.6e-06, Sum P(3) = 7.6e-06
Identities = 46/168 (27%), Positives = 78/168 (46%)
Query: 91 HTSEEYVKVGSGKKEDNALTKNVDSSRQRDGENRDLETKLKEDYVAKSNHRRTLKSEIRL 150
+ SEE + + S +KE + ++ R +TK K+ V K+ R+ + E ++
Sbjct: 790 NASEESIGLHSMEKEIEMEKQEKYIKESKEKSERRFQTKEKD--VEKTE-RKNSEKEKKI 846
Query: 151 KDRSPGNEKDRGNRGSDT--KLKADVTKETSSKPNVKSEKLIPSQGRSHNQSIVDSRDEA 208
K +EKD+ + SD K+K + + + + +SEKL N SR++
Sbjct: 847 KHEHK-SEKDKLDL-SDCVDKIKDKLYSHHTERCHKESEKLKNITTVKKNDDREKSREKM 904
Query: 209 TKKHSRDLTGKDRHADKSGEKSERESKRKHRNRDDEKNRDKSAAKKVD 256
+KH ++ KDRH +S EK E K K + D +KS K+ D
Sbjct: 905 DRKHDKEKPEKDRHLAESKEKHLIEKKNKAADSSDYTKSEKSKNKEKD 952
Score = 70 (29.7 bits), Expect = 3.5e-07, Sum P(3) = 3.5e-07
Identities = 22/70 (31%), Positives = 32/70 (45%)
Query: 394 DVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPL-AGISVSASLAKLNVSMD 452
++ P V SNV + SN H ++ P S K + A ++V S A L MD
Sbjct: 1337 EICPSPKPEVSSNVPERELSNVSNIHSSFAASPTRSVNSKYISADLNVIKSTAPLGTLMD 1396
Query: 453 S-VQLTQSNR 461
+ V L SN+
Sbjct: 1397 NPVHLEPSNQ 1406
Score = 58 (25.5 bits), Expect = 3.5e-07, Sum P(3) = 3.5e-07
Identities = 19/84 (22%), Positives = 39/84 (46%)
Query: 810 VSQGVPTQVNTLKDSP--CAHDDKVTCNIQLEHMSEENKSSAKEDLNLEEVNGNSEAFTG 867
+S G+P + +D+P C+ +K +I+ E + SS + L + + G
Sbjct: 1653 MSTGMPKGILNEQDNPKHCSEGEKCLLSIEDEESQQSTLSSLENHLQ-QSAQPEMHKY-G 1710
Query: 868 ASNEMGMQSSAVENGDNENQDPNQ 891
++ ++ +A E+ ENQ P +
Sbjct: 1711 QLGKVELEENA-EDDKTENQIPQR 1733
Score = 54 (24.1 bits), Expect = 8.8e-07, Sum P(3) = 8.8e-07
Identities = 11/48 (22%), Positives = 24/48 (50%)
Query: 732 ETNEKGERLEEVTDHKSIKNNELEILNDSKEVMEAGEVNNVKDNRPAS 779
E N + ++ E + +N + N SK+++ + + + KDN +S
Sbjct: 1718 EENAEDDKTENQIPQRMTRNKANTVANQSKQILASCTLLSEKDNESSS 1765
Score = 37 (18.1 bits), Expect = 4.3e-05, Sum P(3) = 4.3e-05
Identities = 11/41 (26%), Positives = 21/41 (51%)
Query: 713 CEGNENTASAGVGQNLTNDETNEK----GER-LEEVTDHKS 748
C+ + S G+ + + N++ N K GE+ L + D +S
Sbjct: 1646 CDSDLCEMSTGMPKGILNEQDNPKHCSEGEKCLLSIEDEES 1686
>DICTYBASE|DDB_G0288285 [details] [associations]
symbol:mybX "myb domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001005 InterPro:IPR007526
InterPro:IPR009057 Pfam:PF04433 PROSITE:PS50934 SMART:SM00717
dictyBase:DDB_G0288285 GO:GO:0005634 GO:GO:0003677
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003682
GenomeReviews:CM000154_GR SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 EMBL:AAFI02000109 RefSeq:XP_636792.1 HSSP:P32591
ProteinModelPortal:Q54J55 PRIDE:Q54J55 EnsemblProtists:DDB0220513
GeneID:8626549 KEGG:ddi:DDB_G0288285 eggNOG:COG5259 OMA:WDLINCF
Uniprot:Q54J55
Length = 1620
Score = 109 (43.4 bits), Expect = 7.9e-07, Sum P(2) = 7.9e-07
Identities = 33/152 (21%), Positives = 75/152 (49%)
Query: 114 DSSRQRDGENRDLETKLKEDYVAKSNHRRTLKSEIRLKDRSPGNEKDRGNRGSDTKLKAD 173
+SS E D + ++KE V ++ + ++++ K+ + + N+ +D+ ++ D
Sbjct: 592 ESSSSSSTETDDNDKEMKEQPVQENKDKEMMETDTT-KENNGVETTETTNQTTDS-IETD 649
Query: 174 VTKETSSKPNVKSEKLIPSQGRS----HNQSIVDSRDEATKKHSRDLT--GKDRHADKSG 227
KE +P + EK S+ + HN++ +D+ +K D T G ++ +K
Sbjct: 650 --KEMKDQPIINLEKEKSSEDKEINDDHNENEKQDKDKENEKEKEDKTENGNEKENEKEN 707
Query: 228 EK-----SERESKRKHRNRDDEKNRDKSAAKK 254
EK +E+E++ + N ++++N +K +K
Sbjct: 708 EKENEKENEKENENEKENENEKENENKKEKEK 739
Score = 102 (41.0 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 38/165 (23%), Positives = 69/165 (41%)
Query: 103 KKEDNALTKNVDSSRQRDGENRDLETKLKEDYVAKSNHRRTLKSEIRLKDRSPGNEKDRG 162
K+E + K D + D E ++L+ K ++ K + + E LK+R EK+
Sbjct: 1052 KEELERIQKEKDDKEKEDKE-KELKEKESKEKELKEKDDKEKEKEKELKERED-KEKEED 1109
Query: 163 NRGSDT--------KLKADVTKETSSKPNVKSEKLIPSQGRSHNQSIVDSRDEATKKHSR 214
D K K D KE + K ++ + + N+ D E T K +
Sbjct: 1110 KEAKDKVDKEKEEDKQKQDKEKEEDKEKQEKDKEEDKDKEKEENKE--DKEKEGTDKEGK 1167
Query: 215 DLTGKDRHADKSGEKSERESKRKHRNRDDEKNRDKSAAKKVDLGK 259
D K+ DK E+ ++E+ H ++ D N + K++++ K
Sbjct: 1168 DKEDKEIKEDKEKEEKDKEAIGDH-DKSDSTNT--TTTKEMEIEK 1209
Score = 101 (40.6 bits), Expect = 5.5e-06, Sum P(2) = 5.5e-06
Identities = 30/118 (25%), Positives = 54/118 (45%)
Query: 151 KDRSPGNEK-DRGNRGSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQSIVDSRDEAT 209
K + P E+ +R + D K K D KE K + + E + + R++
Sbjct: 1046 KYQQPSKEELERIQKEKDDKEKEDKEKELKEKESKEKELKEKDDKEKEKEKELKEREDKE 1105
Query: 210 K---KHSRDLTGKDRHADKSGEKSERESKRKHRNRDDEKNRDKSAAK-KVDLGK-GHD 262
K K ++D K++ DK + E+E ++ + +D E+++DK + K D K G D
Sbjct: 1106 KEEDKEAKDKVDKEKEEDKQKQDKEKEEDKEKQEKDKEEDKDKEKEENKEDKEKEGTD 1163
Score = 101 (40.6 bits), Expect = 5.5e-06, Sum P(2) = 5.5e-06
Identities = 31/150 (20%), Positives = 65/150 (43%)
Query: 103 KKEDNALTKNVDSSRQRDGENRDLETKLKEDYVAKSNHR-RTLKSEIRLKDRSP-GNEKD 160
K+ED VD ++ D + +D E + ++ K + + E +D+ G +K+
Sbjct: 1106 KEEDKEAKDKVDKEKEEDKQKQDKEKEEDKEKQEKDKEEDKDKEKEENKEDKEKEGTDKE 1165
Query: 161 RGNRGSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQSI-VDSRDEATKKHSRDLT-G 218
G D ++K D KE K + S + + + ++ +D +T + +
Sbjct: 1166 -GKDKEDKEIKEDKEKEEKDKEAIGDHDKSDSTNTTTTKEMEIEKQDSSTSTNKETVEMN 1224
Query: 219 KDRHADKSGEKSERESKRKHRNRDDEKNRD 248
+D H K EK +E+ +K ++ + +D
Sbjct: 1225 QDDHV-KIDEKETKENDKKSITEEENQQKD 1253
Score = 100 (40.3 bits), Expect = 7.9e-07, Sum P(2) = 7.9e-07
Identities = 42/193 (21%), Positives = 78/193 (40%)
Query: 711 QACEGNENTASAGVGQNLTNDETNEKGERLEEVTDHKSIKN--NELEILNDSKEVMEAGE 768
Q + + N S + + D+ E E+ ++K+ K NE E D + E+
Sbjct: 1251 QKDDNDNNNNSHNHNKEIEKDDNKENENEKEKENENKNEKQIENENEKEKDLNNLSESQS 1310
Query: 769 VNNVKDNRPASGTMGDEPSQLCELDTDMAVEYQARDSTSEIVSQG--VPTQVN--TLKDS 824
N+ + + E + E +++ + + ++ T++ + PT TL +
Sbjct: 1311 SNDQSKSNEQMSSDNQESKENSESNSNTQITSKEQNITTDQSEKPKETPTTTTPATLPAT 1370
Query: 825 PCAHDDKVTCN--IQLEHMSEENKSSAKEDLNLEEVNGNSEAFTGASNEM-----GMQSS 877
P + + T N + E+ +E NK++ N N N E T SN M +
Sbjct: 1371 PISESNTTTTNTIVDKENNNETNKTNEN---NSNNNNTNEENKTAESNNMETVVENNEKK 1427
Query: 878 AVENGDNENQDPN 890
V+N DN N + N
Sbjct: 1428 PVDNDDNNNNNNN 1440
Score = 99 (39.9 bits), Expect = 8.8e-06, Sum P(2) = 8.8e-06
Identities = 32/156 (20%), Positives = 65/156 (41%)
Query: 103 KKEDNALTKNVDSSRQRDGENRDLETKLKEDYVAKSNHRRTLKSEIRLKDRSPGNEKDRG 162
K+++ L + D ++ D E +D K KE+ K + + E + KD+ +K++
Sbjct: 1092 KEKEKELKEREDKEKEEDKEAKDKVDKEKEEDKQKQDKEKEEDKEKQEKDKEEDKDKEKE 1151
Query: 163 NRGSDTKLKADVTKETSSKPN--VKSEKLIPSQGRSHNQSIVDSRDEATKKHSRDLTGKD 220
D K K KE K + +K +K + ++ + D++ ++ T K+
Sbjct: 1152 ENKED-KEKEGTDKEGKDKEDKEIKEDK----EKEEKDKEAIGDHDKSDSTNTT--TTKE 1204
Query: 221 RHADKSGEKSERESKRKHRNRDDEKNRDKSAAKKVD 256
+K + + N+DD D+ K+ D
Sbjct: 1205 MEIEKQDSSTSTNKETVEMNQDDHVKIDEKETKEND 1240
Score = 91 (37.1 bits), Expect = 5.8e-05, Sum P(2) = 5.8e-05
Identities = 32/168 (19%), Positives = 68/168 (40%)
Query: 89 DVHTSEEYVKVGSGKKEDNALTKNV-DSSRQRDGENRDLETKLKEDYVAKSNHRRTLKSE 147
D + +E+ K +KE T+N + +++ E + + KE+ K N K
Sbjct: 674 DHNENEKQDKDKENEKEKEDKTENGNEKENEKENEKENEKENEKENENEKENENE--KEN 731
Query: 148 IRLKDRSPGNEKDRGNRGSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQSIVDSRDE 207
K++ N+K+ N K ++ KE ++ E+ V+S +
Sbjct: 732 ENKKEKEKENKKENENENEKVDEKIEIDKEGINEDEKMDEEKEEKINNKKEDEEVESEIK 791
Query: 208 ATK-KHSRDLTGKDRHADKSGEKSERESKRKHRNRDDEKNRDKSAAKK 254
K K + ++ G+ + GE E + + +DE++ + +K+
Sbjct: 792 KDKLKENEEVEGEIEGENDEGEVVEEDEDEEMEIEEDEEDEEDEKSKE 839
Score = 89 (36.4 bits), Expect = 9.2e-05, Sum P(2) = 9.2e-05
Identities = 36/154 (23%), Positives = 69/154 (44%)
Query: 103 KKEDNALTKNV-DSSRQRDGENRDLET-KLKEDYVA----KSNHRRTLKSEIRLKDRSPG 156
+KE ++ K + D + + +++D E K KED K N + K + ++
Sbjct: 661 EKEKSSEDKEINDDHNENEKQDKDKENEKEKEDKTENGNEKENEKENEKENEKENEKENE 720
Query: 157 NEKDRGNR--GSDTKLKADVTKETSSKPNVK-SEKL-IPSQGRSHNQSIVDSRDEA--TK 210
NEK+ N + K K K+ + N K EK+ I +G + ++ + + ++E K
Sbjct: 721 NEKENENEKENENKKEKEKENKKENENENEKVDEKIEIDKEGINEDEKMDEEKEEKINNK 780
Query: 211 KHSRDLTGKDRHADKSGEKSERESKRKHRNRDDE 244
K ++ + + DK E E E + + N + E
Sbjct: 781 KEDEEVESEIKK-DKLKENEEVEGEIEGENDEGE 813
Score = 87 (35.7 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 25/123 (20%), Positives = 55/123 (44%)
Query: 127 ETKLKEDYVAKSNHRRTLKSEIRLKDRSPGNEKDRGNRGSDTKLKADVTKETSSKPNVKS 186
E + KE+ K R K + +++ EK+R + +L+ + +E K K
Sbjct: 446 EEREKEE---KERLEREEKERLEREEKQEKEEKERLEKEEKERLEREEKQEKEEKEE-KE 501
Query: 187 EKLIPSQGRSHNQSIVDSRDEATKKHSRDLTGKDRHADKSGEKSERESKRKHRNRDDEKN 246
EK + + + ++E K+ D K + ++ + ++E+K +N++ ++N
Sbjct: 502 EKEENEEKEEKEEKEKEEKEEKEKQEKEDDKEKQENENEQEKIEKKENKNDSQNKEIKEN 561
Query: 247 RDK 249
DK
Sbjct: 562 HDK 564
Score = 87 (35.7 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 29/133 (21%), Positives = 61/133 (45%)
Query: 137 KSNHRRTLKSEIRLKDRSPGNEKDRGNRGSDTKLKADVTKETSSKPNV-KSEK-LIPSQG 194
+S +R+ K E R K+ EK+R R +L+ + +E K + K EK + +
Sbjct: 436 QSFYRKKFKHEEREKE-----EKERLEREEKERLEREEKQEKEEKERLEKEEKERLEREE 490
Query: 195 RSHNQSIVDSRDEATKKHSRDLTGKDRHADKSGEKSERES-KRKHRNRDD----EKNRDK 249
+ + + ++ + + K++ + EK E+E K K N ++ EK +K
Sbjct: 491 KQEKEEKEEKEEKEENEEKEEKEEKEKEEKEEKEKQEKEDDKEKQENENEQEKIEKKENK 550
Query: 250 SAAKKVDLGKGHD 262
+ ++ ++ + HD
Sbjct: 551 NDSQNKEIKENHD 563
Score = 84 (34.6 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 26/122 (21%), Positives = 46/122 (37%)
Query: 122 ENRDLETKLKEDYVAKSNHRRTLKSEIRLKDRSPGNEKDRGNRGSDTKLKADVTKETSSK 181
E R+ E K + + K R K E K+R EK+R R + + KE +
Sbjct: 446 EEREKEEKERLEREEKERLEREEKQEKEEKERLEKEEKERLEREEKQEKEEKEEKEEKEE 505
Query: 182 PNVKSEKLIPSQGRSHNQSIVDSRDEATKKHSRDLTGKDRHADKSGEKSERESKRKHRNR 241
K EK + + + D+ K+ + + K + + +E K H +
Sbjct: 506 NEEKEEKEEKEKEEKEEKEKQEKEDDKEKQENENEQEKIEKKENKNDSQNKEIKENHDKK 565
Query: 242 DD 243
D+
Sbjct: 566 DE 567
Score = 83 (34.3 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 25/122 (20%), Positives = 55/122 (45%)
Query: 129 KLKEDYVAKSNHRRTLKSEIRLKDRSPGNEKDRGNRGSDTKLKADVTKETSSKPNVKSEK 188
K K + K R + E +R EK+ R + + K + +E + K EK
Sbjct: 442 KFKHEEREKEEKERLEREEKERLEREEKQEKEEKER-LEKEEKERLEREEKQEKEEKEEK 500
Query: 189 LIPSQGRSHNQSIVDSRDEATKKHSRDLTGKDRHADKSGEKSERESKR--KHRNRDDEKN 246
+ + N+ + ++E K+ + +++ DK +++E E ++ K N++D +N
Sbjct: 501 ----EEKEENEE-KEEKEEKEKEEKEEKEKQEKEDDKEKQENENEQEKIEKKENKNDSQN 555
Query: 247 RD 248
++
Sbjct: 556 KE 557
Score = 73 (30.8 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 39/164 (23%), Positives = 65/164 (39%)
Query: 731 DETNEKGERLEEVTDHKSIKNNELEILN-DSKEVMEAGEVNNVKDNRPASGTMGD-EPSQ 788
D+ +K + EE + K + + E + + KE+ E E KD +GD + S
Sbjct: 1141 DKEEDKDKEKEENKEDKEKEGTDKEGKDKEDKEIKEDKEKEE-KDKE----AIGDHDKSD 1195
Query: 789 LCELDTDMAVEYQARDSTSEIVSQGVPTQVNTLKDSPCAHDDKVTC-NIQLEHMSEENKS 847
T +E + +DS++ + V ++N +D D+K T N + EEN+
Sbjct: 1196 STNTTTTKEMEIEKQDSSTSTNKETV--EMN--QDDHVKIDEKETKENDKKSITEEENQQ 1251
Query: 848 SAKEDLNLEEVNGNSEAFTGASNEMGMQSSAVENGDNENQDPNQ 891
D N N N E + E + NE Q N+
Sbjct: 1252 KDDNDNNNNSHNHNKEIEKDDNKENENEKEKENENKNEKQIENE 1295
>DICTYBASE|DDB_G0283687 [details] [associations]
symbol:DDB_G0283687 "RNA-binding region RNP-1
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
dictyBase:DDB_G0283687 EMBL:AAFI02000056 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 eggNOG:COG0724 KO:K13091
RefSeq:XP_638966.1 ProteinModelPortal:Q54QQ7
EnsemblProtists:DDB0233350 GeneID:8624212 KEGG:ddi:DDB_G0283687
InParanoid:Q54QQ7 OMA:VDINIDE Uniprot:Q54QQ7
Length = 727
Score = 100 (40.3 bits), Expect = 9.6e-07, Sum P(4) = 9.6e-07
Identities = 74/324 (22%), Positives = 127/324 (39%)
Query: 315 YDREHEGLPSHSTKISSGRQHSDI--DSSRVTGNGLSGHYRRHDGSTSGLGGYSPRKRRT 372
YDRE+ G S + SGR + D SSR + + R S R R +
Sbjct: 131 YDREYGG---GSGRRDSGRDYRDNRDSSSRDSRDSRDSRDRSDRDRRYSSESSSSRDRHS 187
Query: 373 EAAAK---TPSPINRSPEKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTS 429
E+ + NR ++K +P + S S+ +T+ SS++ S+ P +S
Sbjct: 188 ESNGNINGSSGGSNRDSKEKQKDLQNSPTTSTSSTSSSNTTTNKESSSSSISTSTPPTSS 247
Query: 430 TTQKPLAGISVSASLAKLNVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLL 489
+T S S++L + + D R + V L + EK L + +
Sbjct: 248 STT------SSSSTLPEPDEESDQ----------RTVFVSKLSQNIVEKDLSDLFSQAGT 291
Query: 490 SSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGS-IL--KIKRPK 546
V+ + V +R KG +VEF E A+ G G IL I+ K
Sbjct: 292 VLNVRLITDK------VTKRMKGVGYVEFSQKEMVDKAIALSGSVLDGQQILVHSIQPEK 345
Query: 547 EFV----------EVAIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHEEPCAFIE 596
+ + E I++G I +++ + + I +G + + + AFI+
Sbjct: 346 KVIKSNSTGSSGGESRIYVGYIHLSVAEEQIRVIFQPYGDIDFINIHTKPGISK-YAFIQ 404
Query: 597 YVDQLVTPKAIAGLNGLKVGGQVL 620
+ Q +AI LNG ++ G+ L
Sbjct: 405 FKTQESAKRAITELNGYELMGKNL 428
Score = 76 (31.8 bits), Expect = 9.6e-07, Sum P(4) = 9.6e-07
Identities = 13/44 (29%), Positives = 23/44 (52%)
Query: 898 GCVFVEYMRAEASCMAAHSLHRRLFDDRIVAVEYIPLNLYRARF 941
GC+++ Y E+ A LH R F + + E +P +Y+ +F
Sbjct: 682 GCIYIRYDNNESPLKAIQKLHGRWFSKKQIIAELVPEPVYKLQF 725
Score = 73 (30.8 bits), Expect = 9.6e-07, Sum P(4) = 9.6e-07
Identities = 38/157 (24%), Positives = 58/157 (36%)
Query: 113 VDSSRQRDGENRDLE-TKLKEDYVAKSNHRRTLKSEIRLKDRSPGNEKD----RGNRGS- 166
++ S R+ NRD E + K S L+S + RS +E+D R R S
Sbjct: 12 LEESINREMSNRDREINEKKRSEPDDSQDLDLLRSNDEKRRRS-SSERDYRDSRDYRDSR 70
Query: 167 DTKLKADVTKETSSKPNVKSEKLIP-SQGRSHNQSIVDSRDEATKKHSRDLTGKDRHADK 225
D + D + + GR ++ D D ++ RD G R +D+
Sbjct: 71 DYRDSRDYRDSRDYRDRDRDRDYGGGGSGRDRDRDRYDRYDRDRDRYDRDYGGGGRSSDR 130
Query: 226 SGEKSERESKRKHRNRDDEKNRDKSAAKKVDLGKGHD 262
+ S R+ RD NRD S+ D D
Sbjct: 131 YDREYGGGSGRRDSGRDYRDNRDSSSRDSRDSRDSRD 167
Score = 69 (29.3 bits), Expect = 2.3e-06, Sum P(4) = 2.3e-06
Identities = 20/83 (24%), Positives = 40/83 (48%)
Query: 167 DTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQSIVDSRDEATKKHSRDLTGKDRHADKS 226
D L+ + +E S++ +EK S + ++ S DE ++ S + +D D
Sbjct: 9 DALLEESINREMSNRDREINEKKRSEPDDSQDLDLLRSNDEKRRRSSSERDYRDSR-DYR 67
Query: 227 GEKSERESKRKHRNRDDEKNRDK 249
+ R+S R +R+ D ++RD+
Sbjct: 68 DSRDYRDS-RDYRDSRDYRDRDR 89
Score = 37 (18.1 bits), Expect = 9.6e-07, Sum P(4) = 9.6e-07
Identities = 13/58 (22%), Positives = 21/58 (36%)
Query: 644 PKHALPLLKKPTEVLKLKNVFNPEGFXXXXXXXXXXXXXXXXXXCARFGSVKSVNVVK 701
P LP + L L+N+F+PE C+ FG + + + K
Sbjct: 623 PYTQLPHFAFVSTCLILRNMFDPE--TETEENWDQDILSETHAECSTFGKIMHIYLDK 678
>TAIR|locus:2137544 [details] [associations]
symbol:AT4G37820 "AT4G37820" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005794
"Golgi apparatus" evidence=ISM;IDA] [GO:0008150
"biological_process" evidence=ND] [GO:0005768 "endosome"
evidence=IDA] [GO:0005802 "trans-Golgi network" evidence=IDA]
GO:GO:0005794 EMBL:CP002687 EMBL:AL035709 EMBL:AL161592
GO:GO:0005768 GO:GO:0005802 UniGene:At.2877 EMBL:AK117758
IPI:IPI00537218 PIR:T06029 RefSeq:NP_195495.1 UniGene:At.31227
PRIDE:Q9T069 EnsemblPlants:AT4G37820.1 GeneID:829938
KEGG:ath:AT4G37820 TAIR:At4g37820 HOGENOM:HOG000210060
InParanoid:Q9T069 OMA:EPQATEE ArrayExpress:Q9T069
Genevestigator:Q9T069 Uniprot:Q9T069
Length = 532
Score = 148 (57.2 bits), Expect = 9.9e-07, P = 9.9e-07
Identities = 49/173 (28%), Positives = 82/173 (47%)
Query: 94 EEYVKVGSGKKEDNALTKNVDSSRQRDGENRDLETKLKEDYVAKSNHRRTLK-SEIRLKD 152
EE G GK+E+ + DSS Q + + + E K KE + S +K +EI+ K+
Sbjct: 340 EESSSQGEGKEEEPEKREKEDSSSQEESKEEEPENKEKE--ASSSQEENEIKETEIKEKE 397
Query: 153 RSPGNEKDRGNRGSDTKLKADVTKETSSKPNVKSEKLIP---SQGRSHNQSIVDSR-DEA 208
S E GN +T+ K+ E+ K N SEK I S S+ Q + + DE+
Sbjct: 398 ESSSQE---GNENKETEKKSS---ESQRKENTNSEKKIEQVESTDSSNTQKGDEQKTDES 451
Query: 209 TKKHSRDLTGKDRHADKSGEKSERESKRKHRNRDDEKNRDKSAAKKVDLGKGH 261
++ D + K+ D S +SE++ + +RN + E+ +++ K L H
Sbjct: 452 KRESGNDTSNKETEDDSSKTESEKKEEN-NRNGETEETQNEQEQTKSALEISH 503
Score = 104 (41.7 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 36/173 (20%), Positives = 66/173 (38%)
Query: 88 VDVHTSEEYVKVGSGK-KEDNALTKNVDSSRQRDGENRDLETKLKEDYVAKSNHRRTLKS 146
+D T E+ +G+ E N T N + + G + + Y N K
Sbjct: 243 LDSKTGEKGFSDSNGELPETNLSTSNATETTESSGSDESGSSGKSTGYQQTKNEEDE-KE 301
Query: 147 EIRLKDRSPGNEKDRGNRGSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQSIVDSRD 206
+++ + K+ G D D +KE + K E +G+ + D
Sbjct: 302 KVQSSEEE-SKVKESGKNEKDASSSQDESKEEKPERKKKEESSSQGEGKEEEPEKREKED 360
Query: 207 EATKKHSRDLT--GKDRHADKSGEKSE---RESKRKHRNRDDEKNRDKSAAKK 254
++++ S++ K++ A S E++E E K K + E N +K KK
Sbjct: 361 SSSQEESKEEEPENKEKEASSSQEENEIKETEIKEKEESSSQEGNENKETEKK 413
Score = 68 (29.0 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 20/87 (22%), Positives = 42/87 (48%)
Query: 693 SVKSVNVVKYGDSNISTIQACEGNENTASAGVGQNLTNDETNEKGERLEEVTDHKSIKNN 752
S K + V+ DS+ +T + E + + G + +N ET + + E ++ +N
Sbjct: 425 SEKKIEQVESTDSS-NTQKGDEQKTDESKRESGNDTSNKETEDDSSKTESEKKEENNRNG 483
Query: 753 ELE-ILNDSKEVMEAGEVNNVKDNRPA 778
E E N+ ++ A E+++ +D + A
Sbjct: 484 ETEETQNEQEQTKSALEISHTQDVKDA 510
>WB|WBGene00018926 [details] [associations]
symbol:F56A11.6 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
GO:GO:0009792 EMBL:FO080624 GeneTree:ENSGT00700000104144
RefSeq:NP_499950.3 EnsemblMetazoa:F56A11.6 GeneID:176884
KEGG:cel:CELE_F56A11.6 UCSC:F56A11.6 CTD:176884 WormBase:F56A11.6
eggNOG:NOG250747 InParanoid:O44519 OMA:SHHEKER NextBio:894440
Uniprot:O44519
Length = 419
Score = 146 (56.5 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 48/144 (33%), Positives = 70/144 (48%)
Query: 114 DSSRQRDGENRDL--ETKLKEDYVAKSNHRRTLKSEIRLKDRSPGNEKDRGNRGSDTKLK 171
D R+RD E+R + +D K R+ + R +DRS G EK R R S K
Sbjct: 215 DDDRRRDEEDRRRTEDVDRSKDRSLKRREERSRSRQDRERDRSRGGEKSRSPRKSHQK-S 273
Query: 172 ADVTKETSSKPNVKSEKLIPSQGRSHNQSIVDSRD-EATKKHSRDLTGKDRHADKSGEKS 230
D K S K +S K + R ++ + RD E ++K D + KDR D+ E+S
Sbjct: 274 VDRDKTRSDKDRSRSRKDREDRDRERSRKDREDRDRERSRKEREDRSRKDRE-DRERERS 332
Query: 231 --ERESK-RK--HRNRDDEKNRDK 249
ERE + RK R+R D ++RD+
Sbjct: 333 RKEREDRSRKDRERSRQDREDRDR 356
>FB|FBgn0037707 [details] [associations]
symbol:RnpS1 "RNA-binding protein S1" species:7227
"Drosophila melanogaster" [GO:0003729 "mRNA binding"
evidence=ISS;NAS] [GO:0000184 "nuclear-transcribed mRNA catabolic
process, nonsense-mediated decay" evidence=NAS] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 EMBL:AE014297
GO:GO:0000166 GO:GO:0003729 Gene3D:3.30.70.330 HSSP:P52298
GeneTree:ENSGT00700000104336 CTD:10921 eggNOG:NOG331533 KO:K14325
EMBL:AY118927 EMBL:AJ459409 RefSeq:NP_649903.1 UniGene:Dm.23312
SMR:Q9VHC0 MINT:MINT-1584472 STRING:Q9VHC0
EnsemblMetazoa:FBtr0082066 GeneID:41147 KEGG:dme:Dmel_CG16788
UCSC:CG16788-RA FlyBase:FBgn0037707 InParanoid:Q9VHC0 OMA:GYGYVDY
OrthoDB:EOG4QFTWV GenomeRNAi:41147 NextBio:822407 Uniprot:Q9VHC0
Length = 374
Score = 97 (39.2 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 38/158 (24%), Positives = 64/158 (40%)
Query: 100 GSGKKE-DNA--LTKNVDSSRQRDGENRDLETKLKEDYVAKSNHRRTLKSEIRLKDRSPG 156
G G+KE DN + K D RD E K + + S+ R+ S+ S G
Sbjct: 9 GEGEKEKDNKEKVAKEKDGKATSGSSRRDRERK-RRGSASSSSDSRSSTSDSSSSRSSSG 67
Query: 157 NEKDRGNRGSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQSIVDSRDEATKKHSRDL 216
+ + + SD+ + +SS + +SEK G + + D + + SR
Sbjct: 68 SSRSSSSSSSDSSSSSS----SSSSDSDRSEKNRRRGGGAAGKD-KDKDKPSARSRSRSR 122
Query: 217 TGKDRHADKSGEKSERESKRKHRNRDDEKNRDKSAAKK 254
T R KS + K R+RD ++R + A++
Sbjct: 123 TRSPRRVSKSPRPGSKARKEPERDRD-RRSRSRDRARR 159
Score = 92 (37.4 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 24/81 (29%), Positives = 40/81 (49%)
Query: 550 EVAIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHEE---PCAFIEYVDQLVTPKA 606
+V I +G ++R ++ V EI +FG +K F V+ H AF+EY A
Sbjct: 218 QVRIHVGRLTRNVTKDHVFEIFSSFGDVKNVEFPVDRFHPNFGRGVAFVEYATPEDCESA 277
Query: 607 IAGLNGLKVGGQVLTAVQAVL 627
+ ++G ++ GQ +T VL
Sbjct: 278 MKHMDGGQIDGQEITVSPVVL 298
>UNIPROTKB|F1NJ03 [details] [associations]
symbol:SRSF4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0048025 "negative
regulation of mRNA splicing, via spliceosome" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GO:GO:0048025 GeneTree:ENSGT00700000104103 OMA:KDRGETR
EMBL:AADN02043941 IPI:IPI00581723 Ensembl:ENSGALT00000002149
Uniprot:F1NJ03
Length = 439
Score = 142 (55.0 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 47/165 (28%), Positives = 76/165 (46%)
Query: 102 GKKEDNALTKNVDSSRQRDGENRDLETKLK---EDYVAKSNHRRTLKSEIRLKDRSPGNE 158
G+KE + D SR R L K K E + S+ + +S + K RS
Sbjct: 204 GQKEKSRTPSKEDKSRSRSRSAEKLRNKSKDKSEGTLHNSDEKEKSRSRSKEKSRSRSGS 263
Query: 159 KDRGNRGSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQSIVDSRDEATKKHSRDLT- 217
KDRG + ++ +++ SK +S+ S+ RSH++ + R +K SRD +
Sbjct: 264 KDRGETRESLRSRSKDREKSISKARSRSKSRNESRSRSHSK---EKRKN--RKRSRDDSR 318
Query: 218 GKDRHADKSGEKSERESKRKHRNRDDEKNRD-KSAAKKVDLGKGH 261
+ R KS EKS+R SKR + +K +D + ++ V K H
Sbjct: 319 SRSRSCSKS-EKSKRRSKRDSKPSSKKKRKDSREQSRSVSKEKEH 362
>RGD|1304968 [details] [associations]
symbol:Rsrc1 "arginine/serine-rich coiled-coil 1" species:10116
"Rattus norvegicus" [GO:0000380 "alternative mRNA splicing, via
spliceosome" evidence=ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO;ISS] [GO:0005634 "nucleus"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=ISO;ISS]
[GO:0006468 "protein phosphorylation" evidence=ISO] [GO:0006913
"nucleocytoplasmic transport" evidence=ISO;ISS] [GO:0008380 "RNA
splicing" evidence=ISO] [GO:0016607 "nuclear speck"
evidence=ISO;ISS] [GO:0046677 "response to antibiotic"
evidence=ISO] RGD:1304968 GO:GO:0005737 GO:GO:0016607 GO:GO:0006913
GO:GO:0000398 CTD:51319 eggNOG:NOG238475 EMBL:BC087665
IPI:IPI00515782 RefSeq:NP_001014194.1 UniGene:Rn.73117
STRING:Q5PPJ2 PRIDE:Q5PPJ2 GeneID:361956 KEGG:rno:361956
UCSC:RGD:1304968 InParanoid:Q5PPJ2 NextBio:678176
Genevestigator:Q5PPJ2 GermOnline:ENSRNOG00000012639 Uniprot:Q5PPJ2
Length = 334
Score = 106 (42.4 bits), Expect = 7.0e-06, Sum P(2) = 7.0e-06
Identities = 43/167 (25%), Positives = 71/167 (42%)
Query: 101 SGKKEDNALTKNVDSSRQRDGENRDLETKLKEDYVAKSNHRRTLKSEIRL--KDRSPGN- 157
S E+ + +K R+R + +++ Y K RR +SE R +DR P +
Sbjct: 5 SSDTEEESRSKRKKKHRRRSSSSSSSDSRT---YSRKKGGRRP-RSESRSWSRDRQPRSH 60
Query: 158 --EKDRGNRGSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQSIVDSRDEATKKHSRD 215
E+ R R S + K + S+ S+GR + + SR ++ + SR
Sbjct: 61 SYERRRRRRSSSSSSYGSRRKRSRSR----------SRGRGKSYRVQRSRSKSRTRRSRS 110
Query: 216 LTGKDRHADKSGEKSERESKRKHRNRDDEKNRDKSAAKKVDLGKGHD 262
H+ S S R ++ + R+RD K RDK +K + KG D
Sbjct: 111 RPRPRSHSRSSERSSHRRTRSRSRDRDRRKVRDKEKREK-EKDKGKD 156
Score = 77 (32.2 bits), Expect = 7.0e-06, Sum P(2) = 7.0e-06
Identities = 30/104 (28%), Positives = 52/104 (50%)
Query: 710 IQACEGNENTASAGVGQNLTNDETNEKGERLEEVTDHKSIKNNEL--EILNDSKEVMEAG 767
++A E NE A + D+ GE+++ V + ++I+++ + SK+V ++
Sbjct: 201 LKAKERNEEEAK----RRKEEDQAT-LGEQVKRVKEIEAIESDSFVQQTFRSSKDVKKSV 255
Query: 768 EVNNVKDNRPASG---TMGDEPSQLCELDTDM---AVEYQARDS 805
E + VK PASG D PS E+D D A++YQ +S
Sbjct: 256 EPSEVKHVTPASGPASVAADPPSTGKEIDPDSIPTAIKYQDDNS 299
Score = 56 (24.8 bits), Expect = 0.00097, Sum P(2) = 0.00097
Identities = 27/112 (24%), Positives = 49/112 (43%)
Query: 737 GERLEEVTDHKSIKNNEL--EILNDSKEVMEAGEVNNVKDNRPASGTMGDEPSQLCELDT 794
GE+++ V + ++I+++ + SK+V ++ E + VK PASG P+
Sbjct: 223 GEQVKRVKEIEAIESDSFVQQTFRSSKDVKKSVEPSEVKHVTPASG-----PA------- 270
Query: 795 DMAVEYQARDSTSEIVSQGVPTQVNTLKDSPCAHDDKVTCNIQLEHMSEENK 846
+V + EI +PT + D+ AH N+ +E E K
Sbjct: 271 --SVAADPPSTGKEIDPDSIPTAIKYQDDNSLAHP-----NLFIEKAEAEEK 315
>FB|FBgn0031883 [details] [associations]
symbol:CG11266 species:7227 "Drosophila melanogaster"
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0008380 "RNA
splicing" evidence=ISS] [GO:0003729 "mRNA binding" evidence=ISS]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0005634 "nucleus"
evidence=IC] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
InterPro:IPR000504 InterPro:IPR006509 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 EMBL:AE014134
GO:GO:0000166 GO:GO:0003729 Gene3D:3.30.70.330 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 GO:GO:0000381 HSSP:Q60900
TIGRFAMs:TIGR01622 KO:K13091 OMA:AGWDTEI
GeneTree:ENSGT00690000102089 UniGene:Dm.7322 GeneID:33989
KEGG:dme:Dmel_CG11266 FlyBase:FBgn0031883 ChiTaRS:CG11266
GenomeRNAi:33989 NextBio:786302 EMBL:AY051860 RefSeq:NP_609095.1
RefSeq:NP_723243.1 SMR:Q9VM49 IntAct:Q9VM49 MINT:MINT-745605
STRING:Q9VM49 EnsemblMetazoa:FBtr0089636 EnsemblMetazoa:FBtr0089640
UCSC:CG11266-RA InParanoid:Q9VM49 Uniprot:Q9VM49
Length = 594
Score = 83 (34.3 bits), Expect = 7.3e-06, Sum P(4) = 7.3e-06
Identities = 43/167 (25%), Positives = 73/167 (43%)
Query: 86 PGVDVHTSEEYVKVG--SGKKEDNALTKNVDSSRQRDGENRDLETKLKEDYVAKSNHRRT 143
PG ++Y + G +G ++ K SR R G +RD +++ ++ +S+HR
Sbjct: 37 PGGGGGHDDDYAENGPRNGSGGGSSHKKQSKRSRSRSG-SRDGKSR-RDRGNERSSHRDK 94
Query: 144 LKSEIRLKDRSPGNEKDRGNR-GSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQSIV 202
K R +D G ++DR R G D + + +E +S GR
Sbjct: 95 DKERDRNRD---GGDRDRHRREGGDRDRERERERERDRSRRSRSRDERGGGGR------Y 145
Query: 203 DSRDEATKKHSRDLTG--KDRHADKSGEKSERESKRKHRNRDDEKNR 247
RD+ + SRD G K D+S R+ +R+ R+RD ++ R
Sbjct: 146 GDRDK--DRRSRDRRGGSKSLQVDRS-----RDKRRRSRSRDQQRKR 185
Score = 72 (30.4 bits), Expect = 0.00010, Sum P(4) = 0.00010
Identities = 31/133 (23%), Positives = 57/133 (42%)
Query: 122 ENRDLETKLKEDYVAKSNHRRTLKSEIRLKD-RSPGNEKDRGNRGSDTKLKADVTKETSS 180
E+ D+E L+ Y+ + + S R + SPG G G D + + S
Sbjct: 3 EDFDVEAMLEAPYMKNNVSAGSGGSGGRKRSGSSPG-----GGGGHDDDYAENGPRNGSG 57
Query: 181 KPNVKSEKLIPSQGRSHNQSIVDSRDEATKKHSRDLTGKDRHADKSG---EKSERESKRK 237
+ ++ S+ RS ++ RD ++ S K+R ++ G ++ RE +
Sbjct: 58 GGSSHKKQSKRSRSRSGSRDGKSRRDRGNERSSHRDKDKERDRNRDGGDRDRHRREGGDR 117
Query: 238 HRNRDDEKNRDKS 250
R R+ E+ RD+S
Sbjct: 118 DRERERERERDRS 130
Score = 70 (29.7 bits), Expect = 7.3e-06, Sum P(4) = 7.3e-06
Identities = 14/48 (29%), Positives = 24/48 (50%)
Query: 894 IFEPGCVFVEYMRAEASCMAAHSLHRRLFDDRIVAVEYIPLNLYRARF 941
I G V+V+ + +A ++LH R F R++ Y+P+ Y F
Sbjct: 528 ISHTGTVYVKCPSTTTAVLAVNALHGRWFAGRVITAAYVPVINYHTMF 575
Score = 62 (26.9 bits), Expect = 7.3e-06, Sum P(4) = 7.3e-06
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 351 HYRRHDGSTSGLGGYSPRKRRTEAAAKTPSPINRSPEKKSAK 392
H R D ++ G SPR+R A +P SPE++ A+
Sbjct: 196 HSRSRDRNSRRRGTNSPRRRSPPNGADRTTPTELSPEERDAR 237
Score = 62 (26.9 bits), Expect = 0.00092, Sum P(4) = 0.00092
Identities = 25/98 (25%), Positives = 40/98 (40%)
Query: 157 NEKDRGNRGS-DTKLKADVTKETSSKPNVKSEKLIPSQG--RSHNQSIVDSRD-EATKKH 212
+++ R GS D K + D E SS + E+ G R ++ RD E ++
Sbjct: 66 SKRSRSRSGSRDGKSRRDRGNERSSHRDKDKERDRNRDGGDRDRHRREGGDRDRERERER 125
Query: 213 SRDLTGKDRHADKSGEKSERESKRKHRNRDDEKNRDKS 250
RD + + R D+ G + K R D + KS
Sbjct: 126 ERDRSRRSRSRDERGGGGRYGDRDKDRRSRDRRGGSKS 163
Score = 59 (25.8 bits), Expect = 7.3e-06, Sum P(4) = 7.3e-06
Identities = 17/80 (21%), Positives = 38/80 (47%)
Query: 544 RPKEFV-EVAIFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNED--HEEPCAFIEYVDQ 600
+PK + +++G + ++ M+ I FG + A ++ + + FI Y +
Sbjct: 327 QPKSHTGPMRLYVGSLHFNITEDMLRGIFEPFGKIDAIQLIMDTETGRSKGYGFITYHNA 386
Query: 601 LVTPKAIAGLNGLKVGGQVL 620
KA+ LNG ++ G+++
Sbjct: 387 DDAKKALEQLNGFELAGRLM 406
Score = 57 (25.1 bits), Expect = 1.1e-05, Sum P(4) = 1.1e-05
Identities = 13/44 (29%), Positives = 24/44 (54%)
Query: 509 REKGQAFVEFLTAEDASAAL-CCDGCSFSGSILKIKRPKEFVEV 551
R KG F+ + A+DA AL +G +G ++K+ E +++
Sbjct: 374 RSKGYGFITYHNADDAKKALEQLNGFELAGRLMKVGNVTERLDM 417
Score = 43 (20.2 bits), Expect = 0.00025, Sum P(4) = 0.00025
Identities = 29/121 (23%), Positives = 48/121 (39%)
Query: 473 LSASEKALMEFLNNFLLSSG-VQHVHGSLPCIGC-VIQREKGQAFVEFLTAEDASAALCC 530
+ S++ L F S G V+ V I C +R KG A++EF E + AL
Sbjct: 242 IQLSQRVRARDLEEFFSSVGKVRDVR----LITCNKTKRFKGIAYIEFDDPESVALALGL 297
Query: 531 DGCSFSGSILKIKRPKEFVEVAIFIGGISRTLSSKMVMEIVCAFGPLKAY----HFEVNE 586
G G + ++ + E +R ++ + GP++ Y HF + E
Sbjct: 298 SGQRLLGVPIMVQHTQ--AEK-------NRLQNAAPAFQPKSHTGPMRLYVGSLHFNITE 348
Query: 587 D 587
D
Sbjct: 349 D 349
>ZFIN|ZDB-GENE-031112-4 [details] [associations]
symbol:stm "starmaker" species:7955 "Danio rerio"
[GO:0009590 "detection of gravity" evidence=IMP] [GO:0043049 "otic
placode formation" evidence=IEP] [GO:0005576 "extracellular region"
evidence=IEA] ZFIN:ZDB-GENE-031112-4 GO:GO:0005576 eggNOG:NOG12793
GO:GO:0043049 GeneTree:ENSGT00550000074777 GO:GO:0009590
EMBL:AY372242 EMBL:CT574549 EMBL:BC129155 IPI:IPI00482673
RefSeq:NP_942112.2 UniGene:Dr.79127 Ensembl:ENSDART00000105174
GeneID:386700 KEGG:dre:386700 CTD:20882 HOVERGEN:HBG095247
OMA:RPGDHSQ NextBio:20813980 Bgee:A2VD23 Uniprot:A2VD23
Length = 613
Score = 128 (50.1 bits), Expect = 7.9e-06, Sum P(2) = 7.9e-06
Identities = 51/227 (22%), Positives = 98/227 (43%)
Query: 36 DEIMIRRKTKNLSENIKEDAMDVSNIPGDCTIENVXXXXXXXXXXXXXXXPGVDVHTSEE 95
DE + +++ S+ + + D SN D E+V + H ++
Sbjct: 263 DEKDSSKDSEDKSQEKSDKSDDGSNSEADEQKESVESKDHDSDSQDSDSAEKKEKHDDKD 322
Query: 96 YVKVGSGKKEDNALTKNVDSSRQRDGENRDLETKLKEDYVAKSNHRRTLKSEIRLKDRSP 155
S +D+ K+ D S Q+D E+ + + K +D K H+ + + + +D+S
Sbjct: 323 QDSSDSADSKDSDEDKDKDHSEQKDSEDHEHKEKHTKD---KEEHKDSDEGKDD-EDKSK 378
Query: 156 GNEKDRGNRGSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQSIVDSR-DEATKKHS- 213
+E D+ S K+D +++ K + KS+ S+ SH+ S DS D + HS
Sbjct: 379 SDEHDKDESESKEASKSDESEQEEKKDD-KSDSDNSSRD-SHSDSDSDSHSDSDSDSHSD 436
Query: 214 -RDLTGKDRHADKSGEK-----SERESKRKHRNRDDEKNRDKSAAKK 254
+ D H+D + S+ +S +RD ++ +DKS+ +
Sbjct: 437 SHSDSDSDSHSDSDSDSDSDSDSDSDSDSDSNSRDKDEKKDKSSESR 483
Score = 109 (43.4 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 44/168 (26%), Positives = 76/168 (45%)
Query: 91 HTSEEYVKVGSGK--KEDNALTKNVDSSRQRDGENRDLETKLKEDYVAKSNHRRTLKSEI 148
H+ +E S + K+D + + + + D + D + K ED KS+ + + K
Sbjct: 214 HSPDEDANKSSTEADKDDTSDKDSSQTDEKHDSDASDKDEK-HEDKDEKSDEKDSSKDS- 271
Query: 149 RLKDRSPGNEKDRGNRGSDTKLKADVTKET-SSKPNVKSEKLIPSQGRS--HNQSIVDSR 205
+D+S + D+ + GS+++ AD KE+ SK + + S + H+ DS
Sbjct: 272 --EDKSQ-EKSDKSDDGSNSE--ADEQKESVESKDHDSDSQDSDSAEKKEKHDDKDQDSS 326
Query: 206 DEATKKHSRDLTGKDRHADKSGEKSERESKRKHRNRDDEKNRDKSAAK 253
D A K S + KD K E + E K KH +D E+++D K
Sbjct: 327 DSADSKDSDEDKDKDHSEQKDSE--DHEHKEKH-TKDKEEHKDSDEGK 371
Score = 109 (43.4 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 35/155 (22%), Positives = 59/155 (38%)
Query: 110 TKNVDSSRQRDGENRDLETKLKEDYVAK--SNHRRTLKSEIRLKDRSPGNEKDRGNRGSD 167
TK+ + + D E +D E K K D K S + KS+ ++ ++ D N D
Sbjct: 358 TKDKEEHKDSD-EGKDDEDKSKSDEHDKDESESKEASKSDESEQEEKKDDKSDSDNSSRD 416
Query: 168 TKLKADVTKETSSKPNVKSEKLIPSQGRSHNQSIVDSRDEATKKHSRDLTGKDRHADKSG 227
+ +D + S + S+ S SH+ S DS ++ D R D+
Sbjct: 417 SHSDSDSDSHSDSDSDSHSDSHSDSDSDSHSDSDSDSDSDSDSDSDSDSDSNSRDKDEKK 476
Query: 228 EKSERESKRKHRNRDDEKNRDKSAAKKVDLGKGHD 262
+KS + D + N + S + D D
Sbjct: 477 DKSSESRDEDSSDSDSKSNSESSETAEEDTNDDKD 511
Score = 68 (29.0 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 30/123 (24%), Positives = 50/123 (40%)
Query: 330 SSGRQHSDIDSSRVTGNGLSGHYRRHDGSTSGLGGYSPRKRRTEAAAKTPSPINRSPEKK 389
SS HSD DS + + H H S S S +++ + + S + + K
Sbjct: 413 SSRDSHSDSDSDSHSDSDSDSHSDSHSDSDSDSHSDSDSDSDSDSDSDSDSDSDSNSRDK 472
Query: 390 SAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSASLAKLNV 449
K D + S+ + + + SS E ++D S+ +K S SAS+ + N
Sbjct: 473 DEKKDKSSESRDEDSSDSDSKSNSESSETAEEDTNDDKDSSVEKDKTDSSDSASV-EAND 531
Query: 450 SMD 452
S D
Sbjct: 532 SDD 534
Score = 61 (26.5 bits), Expect = 7.9e-06, Sum P(2) = 7.9e-06
Identities = 21/98 (21%), Positives = 45/98 (45%)
Query: 714 EGNENTASAGVGQNLTNDETNEKGERLE-EVTDHKSIKNNEL--EILNDSKEVMEAGEVN 770
+ N+ S+ + TND+ + E+ + + +D S++ N+ E +DSK+ + E +
Sbjct: 491 DSKSNSESSETAEEDTNDDKDSSVEKDKTDSSDSASVEANDSDDEHDDDSKDATPSSEDH 550
Query: 771 NVKDNRPASGTMGDEPSQLCELDTDMAVEYQARDSTSE 808
+ S + D+ + D + VE+ D S+
Sbjct: 551 TAEKTDEDSHDVSDDDDDIDAHDDEAGVEH-GTDEASK 587
>TAIR|locus:504955937 [details] [associations]
symbol:AT2G22795 "AT2G22795" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0005768 "endosome" evidence=IDA] [GO:0005802
"trans-Golgi network" evidence=IDA] GO:GO:0005794 EMBL:CP002685
GO:GO:0005768 GO:GO:0005802 IPI:IPI00534353 RefSeq:NP_850032.1
UniGene:At.45724 UniGene:At.74141 PRIDE:F4IKG5
EnsemblPlants:AT2G22795.1 GeneID:816810 KEGG:ath:AT2G22795
OMA:ESTCRKT Uniprot:F4IKG5
Length = 734
Score = 130 (50.8 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 41/169 (24%), Positives = 81/169 (47%)
Query: 87 GVDVHTSEEYVKVGSGKKEDNALTKNVDSSRQRDGENRDLETKLKEDYVAKSNHRRTLKS 146
G TSE + S KE K +SS Q + ++R+ ETK KE+ S+ T+
Sbjct: 414 GGSQETSEVSSQEESKGKESETKDKE-ESSSQEESKDRETETKEKEE---SSSQEETMDK 469
Query: 147 EIRLKDRSPGNEKDRGNRGSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQSIVDSRD 206
E K++ + +++ K+++ +ET K + EK S + +++D
Sbjct: 470 ETEAKEKVESSSQEKNEDKETEKIESSFLEETKEKEDETKEKEESSSQEKTEEKETETKD 529
Query: 207 EATKKHSRDLTGKDRHADKSGEKSERESKRKHRNRDDE-KNRDKSAAKK 254
+ S++ T KD+ +K EK E S+ + + + E K +++S++++
Sbjct: 530 NE-ESSSQEET-KDKENEKI-EKEEASSQEESKENETETKEKEESSSQE 575
Score = 113 (44.8 bits), Expect = 0.00077, Sum P(2) = 0.00077
Identities = 32/164 (19%), Positives = 78/164 (47%)
Query: 92 TSEEYVKVGSGKKEDNALTKNVDSSRQRDGENRDLE-TKLKEDYVAKSNH-RRTLKSEIR 149
+S+E K + +D + + + S+ R+ E ++ E + +E+ + K + ++S +
Sbjct: 423 SSQEESKGKESETKDKEESSSQEESKDRETETKEKEESSSQEETMDKETEAKEKVESSSQ 482
Query: 150 LKDRSPGNEKDRGNRGSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQSIVDSRDEAT 209
K+ EK + +TK K D TKE + + + ++ + + +S S++E
Sbjct: 483 EKNEDKETEKIESSFLEETKEKEDETKEKEESSSQEKTEEKETETKDNEES--SSQEETK 540
Query: 210 KKHSRDLTGKDRHADKSGEKSERESKRKHRNRDDEKNRDKSAAK 253
K + + ++ + + +++E E+K K + E+ ++K K
Sbjct: 541 DKENEKIEKEEASSQEESKENETETKEKEESSSQEETKEKENEK 584
Score = 93 (37.8 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 37/172 (21%), Positives = 79/172 (45%)
Query: 100 GSGKKEDNALTKNVDSSRQRDGE----NRDLETKLKEDYVAKSNHRRTLKSEIRLK-DRS 154
G+G ++N + + + +++++ E N D ++++E K + +SE+ K D
Sbjct: 94 GNGDDKENEIVEGGEENKEKESEGIVSNEDSNSEIEE----KKDSGGVEESEVEEKRDNG 149
Query: 155 PGNEKDR--GNRGSDTKLKADVT-KETSSKPNVKSEKLIPSQGRSHNQSIVDSRDEATKK 211
G E++ G S+ + + D E + K + ++ + + S E ++
Sbjct: 150 GGTEENEKSGTEESEVEERKDNGGTEENEKSGTEESEVEERKDNGGTEENEKSGTEESEV 209
Query: 212 HSRDLTGKDRHADKSG-EKSERESKRKHRNRDDEKNRDKSAAKKVDLGKGHD 262
R G +KSG E+SE E K+ N E++R+KS ++ ++ + D
Sbjct: 210 EERKENGGTEENEKSGSEESEVEEKKD--NGGTEESREKSGTEESEVEEKKD 259
Score = 93 (37.8 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 41/172 (23%), Positives = 76/172 (44%)
Query: 730 NDETNEKGERLEEVTDHKSIKNNELEILNDSKEVMEAGEVNNVKDNRPASGTMGDEPSQL 789
+ E +E E+ E +S ++ E +I D K +E NN K + +S + + +
Sbjct: 262 SSEESEVEEKKENRGIDESEESKEKDI--DEKANIEEARENNYKGDDASSEVVHESEEKT 319
Query: 790 CELDTDMAVEYQARDSTSEIVSQGVPTQV-NTLKDSPCAHDDKVTCNIQ------LEHMS 842
E + VE ++ T E+ + + + NT + + D+K T + LE +
Sbjct: 320 SESENSEKVEDKSGIKTEEVEDSVIKSVLPNTTDNGESSSDEKSTGSSSGHESDSLEGIK 379
Query: 843 EENKSSAKEDLNLEEVN-GNSEA-FTGASNEMGMQSSAVENGDNENQDPNQG 892
E +S K +L +E N N E+ TG S G + E + +Q+ ++G
Sbjct: 380 SEGESMEKNELLEKEFNDSNGESSVTGKSTGSG-DGGSQETSEVSSQEESKG 430
Score = 93 (37.8 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 40/175 (22%), Positives = 72/175 (41%)
Query: 714 EGNENTASAGVGQNLTNDETNEKGERLEEVTDHKSIKNNELEILNDSKEVMEAGEVNNVK 773
E +N S+ Q T D+ NEK E+ EE + + K NE E KE + E K
Sbjct: 526 ETKDNEESSS--QEETKDKENEKIEK-EEASSQEESKENETE--TKEKEESSSQEETKEK 580
Query: 774 DNRPASGTMGDEPSQLCELDTDMAVEYQARDSTSEIVSQGVPTQVNTLKDSPCAHDDKVT 833
+N + E + + + + +S S+ ++ T+ K+ +++ +
Sbjct: 581 ENEKIEKEESAPQEETKEKENE---KIEKEESASQEETKEKETETKE-KEESSSNESQEN 636
Query: 834 CNIQLEHMS--EENKSSAKEDLN-LEEVNGNSEAFTGASNEMGMQSSAVENGDNE 885
N + E EEN+ ED + + N S+ S E + + +NG+ E
Sbjct: 637 VNTESEKKEQVEENEKKTDEDTSESSKENSVSDTEQKQSEETSEKEESNKNGETE 691
Score = 59 (25.8 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 33/162 (20%), Positives = 63/162 (38%)
Query: 726 QNLTNDETNEKGERLEEVTDHKSIKNNELEILN--DSKEVMEAGEVNNVKDNRPASGTMG 783
Q T ++ NEK E+ EE + K E E + +S E E + S +
Sbjct: 574 QEETKEKENEKIEK-EESAPQEETKEKENEKIEKEESASQEETKEKETETKEKEESSSNE 632
Query: 784 DEPSQLCELDTDMAVEYQAR---DSTSEIVSQGVPTQVNTLKDSPCAHDDKVTCNIQLEH 840
+ + E + VE + + TSE + + + + ++ N + E
Sbjct: 633 SQENVNTESEKKEQVEENEKKTDEDTSESSKENSVSDTEQKQSEETSEKEESNKNGETEV 692
Query: 841 MSEENKSSAKEDL--NLEEVNGNSEAFTGASNEMGMQSSAVE 880
E++ SS+ +L +++V + E + N +S A E
Sbjct: 693 TQEQSDSSSDTNLPQEVKDVRTDLETLPDSGNGGSNESVAAE 734
Score = 46 (21.3 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 17/84 (20%), Positives = 38/84 (45%)
Query: 717 ENTASAGVGQNL-TNDETNEKGERLEEVTDHKSIKNNELEILNDSKEVMEAGEVNNVKDN 775
E ++S +N+ T E E+ E E+ TD + ++++ ++D+++ + N
Sbjct: 626 EESSSNESQENVNTESEKKEQVEENEKKTDEDTSESSKENSVSDTEQKQSEETSEKEESN 685
Query: 776 RPASGTMGDEPSQLCELDTDMAVE 799
+ + E S DT++ E
Sbjct: 686 KNGETEVTQEQSDSSS-DTNLPQE 708
Score = 44 (20.5 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 14/85 (16%), Positives = 34/85 (40%)
Query: 714 EGNENTASAGVGQNLTNDETNEKGERLEEVTDHKSIKNNELEILNDSKEVMEAGEVNNVK 773
E EN + + + + E E + S+ + E + ++ E E+ + +
Sbjct: 632 ESQENVNTESEKKEQVEENEKKTDEDTSESSKENSVSDTEQKQSEETSEKEESNKNGETE 691
Query: 774 DNRPASGTMGDE--PSQLCELDTDM 796
+ S + D P ++ ++ TD+
Sbjct: 692 VTQEQSDSSSDTNLPQEVKDVRTDL 716
>GENEDB_PFALCIPARUM|MAL13P1.120 [details] [associations]
symbol:MAL13P1.120 "splicing factor,
putative" species:5833 "Plasmodium falciparum" [GO:0003729 "mRNA
binding" evidence=ISS] [GO:0008380 "RNA splicing" evidence=ISS]
InterPro:IPR000504 InterPro:IPR006509 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
GO:GO:0008380 GO:GO:0000166 GO:GO:0003729 GO:GO:0006397
Gene3D:3.30.70.330 EMBL:AL844509 HSSP:Q60900 TIGRFAMs:TIGR01622
KO:K13091 OMA:VDINIDE RefSeq:XP_001349956.1
ProteinModelPortal:Q8IE99 IntAct:Q8IE99 MINT:MINT-1582995
EnsemblProtists:MAL13P1.120:mRNA GeneID:813670 KEGG:pfa:MAL13P1.120
EuPathDB:PlasmoDB:PF3D7_1321700 ProtClustDB:CLSZ2848098
Uniprot:Q8IE99
Length = 864
Score = 110 (43.8 bits), Expect = 1.3e-05, Sum P(4) = 1.3e-05
Identities = 54/234 (23%), Positives = 97/234 (41%)
Query: 40 IRRKTKNLSENIKEDAMDVSNIP-GDCTIENVXXXXXXXXXXXXXXXPGVDVHTSEEYVK 98
IR K+ N S+ KED D +NI + + EN G + ++S+ +
Sbjct: 191 IRSKSSN-SKTKKED--DDNNIHCNNSSQENEQKRKEQLLENKDNKKEGKNTNSSKVKKR 247
Query: 99 VGSGKKEDNALTKNVDSSRQRDGENRDLETKLKEDYVAKSNHRRTLKSEIRLKDRSPGNE 158
+ E++ N S +R + + K K D K N R + S +
Sbjct: 248 YHTSSDENDRNNDNTSSEEER---TKSRKKKHKNDNSDKKNENRVVDYS-----SSSSSS 299
Query: 159 KDRGNRGSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQSIVD----SRDEATKKHSR 214
D N S + + D K K N +S ++ S S++ + D SR K +S+
Sbjct: 300 SDASNEYSSSDEERDHKKRKIRKTN-RSRRISRSSSESNSSTDNDKRGTSRSSEEKVYSK 358
Query: 215 --DLTGKDRHADKSGEKS-ERESKR---KHRNRDDEKNRDKSAAKKVDLGKGHD 262
+ +DR ++ ++ +R+ R + R+RD +++RD+ K D + HD
Sbjct: 359 YDKMKRRDRERERDRDRDRDRDRDRDRDRDRDRDRDRDRDREREKDKDRDRDHD 412
Score = 95 (38.5 bits), Expect = 0.00044, Sum P(4) = 0.00044
Identities = 40/164 (24%), Positives = 68/164 (41%)
Query: 91 HTSEEYVKVGSGKKE---DNALTKNVDSSRQRD-GENRDLETKLKEDYVAKSNHRRTLKS 146
+TS E + S KK+ DN+ KN +R D + + +Y + R K
Sbjct: 261 NTSSEEERTKSRKKKHKNDNSDKKN--ENRVVDYSSSSSSSSDASNEYSSSDEERDHKKR 318
Query: 147 EIRLKDRSPGNEKDRGNRGSDTKL-KADVTKETSSKPNVKSEKLIPSQGRSHNQSIVDSR 205
+IR +RS + S T K ++ + K K +K+ + R + R
Sbjct: 319 KIRKTNRSRRISRSSSESNSSTDNDKRGTSRSSEEKVYSKYDKM-KRRDRERERDRDRDR 377
Query: 206 DEATKKHSRDLTGKDRHADKSGEKSERESKRKHRNRDDEKNRDK 249
D + RD +DR D+ ++ K K R+RD ++ RD+
Sbjct: 378 DR-DRDRDRD---RDRDRDRDRDRDREREKDKDRDRDHDRYRDR 417
Score = 95 (38.5 bits), Expect = 0.00044, Sum P(4) = 0.00044
Identities = 52/232 (22%), Positives = 93/232 (40%)
Query: 46 NLSENIKEDAMDVSNIPGDCTIE-NVXXXXXXXXXXXXXXXPGVD--VHTSEEYVKVGSG 102
N+ EN ED + + D ++ NV G D H E+ + S
Sbjct: 94 NIDENFDEDNDENVDKNVDKNVDKNVDKNDDEDDGEDDGEDDGEDDGEHDGEDDGEDDSD 153
Query: 103 KKEDNALTKN-VDSSRQR----DGENRDLETK-LKEDYVAKSNHRRTLKSE----IRLKD 152
+ + + KN D+ ++ D + + ++K +K +KS++ +T K + I +
Sbjct: 154 EDKHENIPKNKADTLKEESDVSDNHHNNRKSKNIKNSIRSKSSNSKTKKEDDDNNIHCNN 213
Query: 153 RSPGNEKDRGNRGSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQSIVDSRDEATK-- 210
S NE+ R + + K K T+S VK S N S +E TK
Sbjct: 214 SSQENEQKRKEQLLENKDNKKEGKNTNSS-KVKKRYHTSSDENDRNNDNTSSEEERTKSR 272
Query: 211 --KHSRDLTGK---DRHAD-KSGEKSERESKRKHRNRDDEKNRDKSAAKKVD 256
KH D + K +R D S S ++ ++ + D+E++ K +K +
Sbjct: 273 KKKHKNDNSDKKNENRVVDYSSSSSSSSDASNEYSSSDEERDHKKRKIRKTN 324
Score = 73 (30.8 bits), Expect = 1.3e-05, Sum P(4) = 1.3e-05
Identities = 28/93 (30%), Positives = 42/93 (45%)
Query: 455 QLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVI-QRE--- 510
++ ++ R + V NL L A E+ + EF + V G + I C+ QR
Sbjct: 478 EMEEAKRDDLTVLVLNLDLKADERDIYEFFSE---------VAGKVRDIQCIKDQRSGKS 528
Query: 511 KGQAFVEFLTAEDASAALCCDGCSFSGSILKIK 543
KG A+VEF T E AL +G +KI+
Sbjct: 529 KGVAYVEFYTQEAVIKALAANGMMLKNRPIKIQ 561
Score = 54 (24.1 bits), Expect = 1.3e-05, Sum P(4) = 1.3e-05
Identities = 17/75 (22%), Positives = 35/75 (46%)
Query: 549 VEVAIFIGGISRTLSSKMVMEIVCAFGPL-KAYHFEVNED----HEEPCAFIEYVDQLVT 603
+ + ++IGG+ LS+ E+ F P E++ D + FI++
Sbjct: 584 IPLKLYIGGLLGPLSNITEQELKQLFNPFGDILDVEIHRDPYTGKSKGFGFIQFHKASEA 643
Query: 604 PKAIAGLNGLKVGGQ 618
+A+ +NG++V G+
Sbjct: 644 IEALTVMNGMEVAGR 658
Score = 40 (19.1 bits), Expect = 1.3e-05, Sum P(4) = 1.3e-05
Identities = 34/185 (18%), Positives = 71/185 (38%)
Query: 751 NNELEILNDSKEVMEAGEVNNVKDNRPASGTMGDEPSQLCELDTDMAVEYQA-RDSTSEI 809
N + IL + +DN GD + + +A+ + RDS I
Sbjct: 676 NTQENILKQQQMAKNINTEEEEQDNEKIDNDDGDGGGLIAGTGSKIALMQKLQRDS---I 732
Query: 810 VSQGVPTQVNTLKDSPCAHDDKV--TCNIQLEHMSEENKSSAKEDLNLEEVNGNSEAFTG 867
+ +P++ T ++ A + V T NI +++ S N E + + + F
Sbjct: 733 IDPNIPSRYATGANAIMARNSFVPSTNNIN-NNVTTNLVLSNMFSSNDENIGSDPDFFND 791
Query: 868 ASNEMGMQSSAVENGDNENQDPNQGHIFEPGCVFVEYMRAEASCMAAHSLHRRLFDDRIV 927
++ + S + G N + +I G ++++Y + S + L+ R F ++
Sbjct: 792 ILEDVKEECS--KYGKVVNIWLDTKNI--DGKIYIKYSNNDESLKSFQFLNGRYFGGSLI 847
Query: 928 AVEYI 932
+I
Sbjct: 848 NAYFI 852
Score = 38 (18.4 bits), Expect = 0.00039, Sum P(3) = 0.00039
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 594 FIEYVDQLVTPKAIAGLNGLKVGGQVLTA 622
+I+Y + + K+ LNG GG ++ A
Sbjct: 821 YIKYSNNDESLKSFQFLNGRYFGGSLINA 849
>UNIPROTKB|Q8IE99 [details] [associations]
symbol:MAL13P1.120 "Splicing factor, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0003729 "mRNA
binding" evidence=ISS] [GO:0008380 "RNA splicing" evidence=ISS]
InterPro:IPR000504 InterPro:IPR006509 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
GO:GO:0008380 GO:GO:0000166 GO:GO:0003729 GO:GO:0006397
Gene3D:3.30.70.330 EMBL:AL844509 HSSP:Q60900 TIGRFAMs:TIGR01622
KO:K13091 OMA:VDINIDE RefSeq:XP_001349956.1
ProteinModelPortal:Q8IE99 IntAct:Q8IE99 MINT:MINT-1582995
EnsemblProtists:MAL13P1.120:mRNA GeneID:813670 KEGG:pfa:MAL13P1.120
EuPathDB:PlasmoDB:PF3D7_1321700 ProtClustDB:CLSZ2848098
Uniprot:Q8IE99
Length = 864
Score = 110 (43.8 bits), Expect = 1.3e-05, Sum P(4) = 1.3e-05
Identities = 54/234 (23%), Positives = 97/234 (41%)
Query: 40 IRRKTKNLSENIKEDAMDVSNIP-GDCTIENVXXXXXXXXXXXXXXXPGVDVHTSEEYVK 98
IR K+ N S+ KED D +NI + + EN G + ++S+ +
Sbjct: 191 IRSKSSN-SKTKKED--DDNNIHCNNSSQENEQKRKEQLLENKDNKKEGKNTNSSKVKKR 247
Query: 99 VGSGKKEDNALTKNVDSSRQRDGENRDLETKLKEDYVAKSNHRRTLKSEIRLKDRSPGNE 158
+ E++ N S +R + + K K D K N R + S +
Sbjct: 248 YHTSSDENDRNNDNTSSEEER---TKSRKKKHKNDNSDKKNENRVVDYS-----SSSSSS 299
Query: 159 KDRGNRGSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQSIVD----SRDEATKKHSR 214
D N S + + D K K N +S ++ S S++ + D SR K +S+
Sbjct: 300 SDASNEYSSSDEERDHKKRKIRKTN-RSRRISRSSSESNSSTDNDKRGTSRSSEEKVYSK 358
Query: 215 --DLTGKDRHADKSGEKS-ERESKR---KHRNRDDEKNRDKSAAKKVDLGKGHD 262
+ +DR ++ ++ +R+ R + R+RD +++RD+ K D + HD
Sbjct: 359 YDKMKRRDRERERDRDRDRDRDRDRDRDRDRDRDRDRDRDREREKDKDRDRDHD 412
Score = 95 (38.5 bits), Expect = 0.00044, Sum P(4) = 0.00044
Identities = 40/164 (24%), Positives = 68/164 (41%)
Query: 91 HTSEEYVKVGSGKKE---DNALTKNVDSSRQRD-GENRDLETKLKEDYVAKSNHRRTLKS 146
+TS E + S KK+ DN+ KN +R D + + +Y + R K
Sbjct: 261 NTSSEEERTKSRKKKHKNDNSDKKN--ENRVVDYSSSSSSSSDASNEYSSSDEERDHKKR 318
Query: 147 EIRLKDRSPGNEKDRGNRGSDTKL-KADVTKETSSKPNVKSEKLIPSQGRSHNQSIVDSR 205
+IR +RS + S T K ++ + K K +K+ + R + R
Sbjct: 319 KIRKTNRSRRISRSSSESNSSTDNDKRGTSRSSEEKVYSKYDKM-KRRDRERERDRDRDR 377
Query: 206 DEATKKHSRDLTGKDRHADKSGEKSERESKRKHRNRDDEKNRDK 249
D + RD +DR D+ ++ K K R+RD ++ RD+
Sbjct: 378 DR-DRDRDRD---RDRDRDRDRDRDREREKDKDRDRDHDRYRDR 417
Score = 95 (38.5 bits), Expect = 0.00044, Sum P(4) = 0.00044
Identities = 52/232 (22%), Positives = 93/232 (40%)
Query: 46 NLSENIKEDAMDVSNIPGDCTIE-NVXXXXXXXXXXXXXXXPGVD--VHTSEEYVKVGSG 102
N+ EN ED + + D ++ NV G D H E+ + S
Sbjct: 94 NIDENFDEDNDENVDKNVDKNVDKNVDKNDDEDDGEDDGEDDGEDDGEHDGEDDGEDDSD 153
Query: 103 KKEDNALTKN-VDSSRQR----DGENRDLETK-LKEDYVAKSNHRRTLKSE----IRLKD 152
+ + + KN D+ ++ D + + ++K +K +KS++ +T K + I +
Sbjct: 154 EDKHENIPKNKADTLKEESDVSDNHHNNRKSKNIKNSIRSKSSNSKTKKEDDDNNIHCNN 213
Query: 153 RSPGNEKDRGNRGSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQSIVDSRDEATK-- 210
S NE+ R + + K K T+S VK S N S +E TK
Sbjct: 214 SSQENEQKRKEQLLENKDNKKEGKNTNSS-KVKKRYHTSSDENDRNNDNTSSEEERTKSR 272
Query: 211 --KHSRDLTGK---DRHAD-KSGEKSERESKRKHRNRDDEKNRDKSAAKKVD 256
KH D + K +R D S S ++ ++ + D+E++ K +K +
Sbjct: 273 KKKHKNDNSDKKNENRVVDYSSSSSSSSDASNEYSSSDEERDHKKRKIRKTN 324
Score = 73 (30.8 bits), Expect = 1.3e-05, Sum P(4) = 1.3e-05
Identities = 28/93 (30%), Positives = 42/93 (45%)
Query: 455 QLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVI-QRE--- 510
++ ++ R + V NL L A E+ + EF + V G + I C+ QR
Sbjct: 478 EMEEAKRDDLTVLVLNLDLKADERDIYEFFSE---------VAGKVRDIQCIKDQRSGKS 528
Query: 511 KGQAFVEFLTAEDASAALCCDGCSFSGSILKIK 543
KG A+VEF T E AL +G +KI+
Sbjct: 529 KGVAYVEFYTQEAVIKALAANGMMLKNRPIKIQ 561
Score = 54 (24.1 bits), Expect = 1.3e-05, Sum P(4) = 1.3e-05
Identities = 17/75 (22%), Positives = 35/75 (46%)
Query: 549 VEVAIFIGGISRTLSSKMVMEIVCAFGPL-KAYHFEVNED----HEEPCAFIEYVDQLVT 603
+ + ++IGG+ LS+ E+ F P E++ D + FI++
Sbjct: 584 IPLKLYIGGLLGPLSNITEQELKQLFNPFGDILDVEIHRDPYTGKSKGFGFIQFHKASEA 643
Query: 604 PKAIAGLNGLKVGGQ 618
+A+ +NG++V G+
Sbjct: 644 IEALTVMNGMEVAGR 658
Score = 40 (19.1 bits), Expect = 1.3e-05, Sum P(4) = 1.3e-05
Identities = 34/185 (18%), Positives = 71/185 (38%)
Query: 751 NNELEILNDSKEVMEAGEVNNVKDNRPASGTMGDEPSQLCELDTDMAVEYQA-RDSTSEI 809
N + IL + +DN GD + + +A+ + RDS I
Sbjct: 676 NTQENILKQQQMAKNINTEEEEQDNEKIDNDDGDGGGLIAGTGSKIALMQKLQRDS---I 732
Query: 810 VSQGVPTQVNTLKDSPCAHDDKV--TCNIQLEHMSEENKSSAKEDLNLEEVNGNSEAFTG 867
+ +P++ T ++ A + V T NI +++ S N E + + + F
Sbjct: 733 IDPNIPSRYATGANAIMARNSFVPSTNNIN-NNVTTNLVLSNMFSSNDENIGSDPDFFND 791
Query: 868 ASNEMGMQSSAVENGDNENQDPNQGHIFEPGCVFVEYMRAEASCMAAHSLHRRLFDDRIV 927
++ + S + G N + +I G ++++Y + S + L+ R F ++
Sbjct: 792 ILEDVKEECS--KYGKVVNIWLDTKNI--DGKIYIKYSNNDESLKSFQFLNGRYFGGSLI 847
Query: 928 AVEYI 932
+I
Sbjct: 848 NAYFI 852
Score = 38 (18.4 bits), Expect = 0.00039, Sum P(3) = 0.00039
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 594 FIEYVDQLVTPKAIAGLNGLKVGGQVLTA 622
+I+Y + + K+ LNG GG ++ A
Sbjct: 821 YIKYSNNDESLKSFQFLNGRYFGGSLINA 849
>DICTYBASE|DDB_G0268132 [details] [associations]
symbol:DDB_G0268132 "SET domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0034968 "histone
lysine methylation" evidence=IEA] [GO:0018024 "histone-lysine
N-methyltransferase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0032259
"methylation" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0008168 "methyltransferase activity"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
Pfam:PF00856 InterPro:IPR001214 InterPro:IPR006560 PROSITE:PS50280
PROSITE:PS51215 SMART:SM00317 dictyBase:DDB_G0268132 GO:GO:0005634
EMBL:AAFI02000003 eggNOG:COG2940 GO:GO:0018024 GO:GO:0034968
InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868 KO:K11423
RefSeq:XP_647576.1 PRIDE:Q55FF7 EnsemblProtists:DDB0237830
GeneID:8616388 KEGG:ddi:DDB_G0268132 OMA:FFIERTE Uniprot:Q55FF7
Length = 898
Score = 111 (44.1 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 34/148 (22%), Positives = 66/148 (44%)
Query: 107 NALTKNVDSSRQRDGENRDLETKLKEDYVAKSNHRRTLKSEIRLKDRSPGNEKDRGNRGS 166
N + N +++ + N + L +D + R K R+K+R+ K+RG++
Sbjct: 20 NEINNNNNNNNNNNYNNNNNNNNLNKDKDKDKDKERD-KDRERIKERT----KERGDKER 74
Query: 167 DTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQSIVDSRDEATKKHSRDLTGKDRHADKS 226
D + D +E + K + + Q H + E K+ +D KD+ DK
Sbjct: 75 DRDKERD--RERKKEKVEKPQVAVLKQSAQHVKQQRLKEKEKGKEKEKDKE-KDKEKDKE 131
Query: 227 GEKSERESKRKHRNRDDEKNRDKSAAKK 254
E+ + + K K ++R+ EK ++K K+
Sbjct: 132 REREKEKEKEKVKDREKEKEKEKEKEKE 159
Score = 99 (39.9 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 44/156 (28%), Positives = 66/156 (42%)
Query: 114 DSSRQRDGENRDLETK---LKEDYVAKSNHRRTLKSEIRLKDRSPGNEKDRGNRGSDTKL 170
D R RD E RD E K +++ VA + RLK++ G EK++ K
Sbjct: 71 DKERDRDKE-RDRERKKEKVEKPQVAVLKQSAQHVKQQRLKEKEKGKEKEKDKEKDKEKD 129
Query: 171 KADVTKETSSKPNVKS-------EKLIPSQGRSHNQSIVDSRDEATKKHSRD-LTGKD-- 220
K ++ K VK EK + + + D E K+ RD L KD
Sbjct: 130 KEREREKEKEKEKVKDREKEKEKEKEKEKEKVKDREKVKDREKEKEKEKERDKLKPKDSK 189
Query: 221 -RHADKSGEK-SERESKR-KHRNRDDEKNRDKSAAK 253
+ D EK +RE +R K R+R+ +KN + + K
Sbjct: 190 IKERDIEKEKVRDREKEREKIRDREKDKNSNNNIIK 225
Score = 80 (33.2 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 43/202 (21%), Positives = 85/202 (42%)
Query: 704 DSNISTIQACEGNENTASAGVGQNLTNDETNEKGERLEEVTDHKSIKNNEL-EILNDSKE 762
+SN + I+ E + + A +N+T E N +++ SI NN +I+N S
Sbjct: 218 NSNNNIIKPKEKKDESI-AKTQKNITIKE-NGNITSSSSISNSSSINNNNNNKIINKSVS 275
Query: 763 VMEAGEVNNVKDNRPASGTMGDEPSQLCELDTDMAVEYQARDSTSEIVSQGVPTQVNTL- 821
G +N +N ++G+ G + + LD+ + S S+ S T + L
Sbjct: 276 TNGNGNSSNSTNNNNSNGSNGVDIKKKPILDSKKRA-LPSSSSKSQTTSTSTSTSTSKLS 334
Query: 822 -------KDSPCAHDDKVTCNIQLEHMSEE-NKSSAKEDLNLE---EVNGNSEAFTGASN 870
KDS + ++ ++ N S +D + + + +GN + +G+S+
Sbjct: 335 KPIVKKKKDSNLKRIKLSNGGVVTKYKRKKSNNDSGSDDSSYDSSDDSSGNDSSSSGSSS 394
Query: 871 EMGMQSSAVENGDNENQDPNQG 892
G S +N +++ D + G
Sbjct: 395 SSGSDDS--DNSSDDDSDSSDG 414
>WB|WBGene00018119 [details] [associations]
symbol:F36H12.3 species:6239 "Caenorhabditis elegans"
[GO:0005198 "structural molecule activity" evidence=IEA]
InterPro:IPR000535 Pfam:PF00635 PROSITE:PS50202 GO:GO:0005856
GO:GO:0005198 Gene3D:2.60.40.360 InterPro:IPR008962 SUPFAM:SSF49354
GeneTree:ENSGT00690000102102 EMBL:FO081309 PIR:T33457
RefSeq:NP_500767.1 UniGene:Cel.23403 ProteinModelPortal:O76719
SMR:O76719 STRING:O76719 EnsemblMetazoa:F36H12.3 GeneID:177307
KEGG:cel:CELE_F36H12.3 UCSC:F36H12.3 CTD:177307 WormBase:F36H12.3
InParanoid:O76719 OMA:EVTITRN NextBio:896198 Uniprot:O76719
Length = 335
Score = 132 (51.5 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 38/166 (22%), Positives = 77/166 (46%)
Query: 93 SEEYVKVGSGKKEDNALTKNVDSSRQRDGENRDLETKLKEDYVAKSNHRRTLKSEIRLKD 152
S++ K KKE+ K+ S ++ + + + + KE+ K ++ K E KD
Sbjct: 56 SKKSEKKEEPKKEEEKKEKSKKSEGKKSDKKEEKKEEKKEEKEDKKEEKKEEKKEDDKKD 115
Query: 153 RSPGNEKDRG--NRGSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQSIVDSRDEATK 210
+KD ++ S+ K + + K+ K + K +K +S N+ D +D+ K
Sbjct: 116 EKKDEKKDEKEEDKKSEDKKEDEKEKDDDKKEDKKDDK------KSDNK---DDKDDEKK 166
Query: 211 KHSRDLTGKDRHADKSGEKSERESKRKHRNRDDEKNRDKSAAKKVD 256
+ +D + + K +K E++ ++K +++EK +K KK D
Sbjct: 167 EEKKDDKEEKKEEKKEEKKEEKKEEKKEEKKEEEKKEEKKEEKKED 212
>DICTYBASE|DDB_G0270880 [details] [associations]
symbol:gflC "PHD zinc finger-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 SMART:SM00249
dictyBase:DDB_G0270880 EMBL:AAFI02000005 GenomeReviews:CM000150_GR
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 eggNOG:NOG243978 RefSeq:XP_001134472.1
ProteinModelPortal:Q1ZXQ2 EnsemblProtists:DDB0231781 GeneID:8616983
KEGG:ddi:DDB_G0270880 InParanoid:Q1ZXQ2 OMA:HECEDEA Uniprot:Q1ZXQ2
Length = 1720
Score = 115 (45.5 bits), Expect = 3.0e-05, Sum P(4) = 3.0e-05
Identities = 30/150 (20%), Positives = 69/150 (46%)
Query: 111 KNVDSSRQRDGENRDLETKLKEDYVAKSNHRRTLKSEIRLKDRSPGNEKD-RGNRGSDTK 169
+N ++ + E+ D++ + +D KS ++ LK E+ ++ EKD + +
Sbjct: 753 QNKNNKKISSSEDLDVDILVDDDESTKSVNKNHLKKELINNHQNNAKEKDVLQEKDKIIQ 812
Query: 170 LKADVTKETSSKPNVKSEKLIPSQGRSHNQSIVDSRDEATKKHSRDLTGKDRHADKSGEK 229
+ + KE + ++ EK + + ++ E K+ ++ K++ +K EK
Sbjct: 813 FEKEKEKEKEKEKEIEKEKEKEREREKEKERETETETEKEKEKEKE---KEKEKEKEKEK 869
Query: 230 SERESKRKHRNRDDEKNRDKSAAKKVDLGK 259
+ + + K R R+ E+ R+K K+ + K
Sbjct: 870 EKEKEREKEREREREREREKEKEKEKEKEK 899
Score = 113 (44.8 bits), Expect = 4.7e-05, Sum P(4) = 4.7e-05
Identities = 34/153 (22%), Positives = 73/153 (47%)
Query: 103 KKEDNALTKNVDSSRQRDGEN-RDLETKLKEDYVAKSNHRRTLKSEIRLKDRSPGNEKDR 161
K+++ + K + R+R+ E R+ ET+ +++ K + K + + K++ EK+R
Sbjct: 821 KEKEKEIEKEKEKEREREKEKERETETETEKEK-EKEKEKEKEKEKEKEKEKEKEREKER 879
Query: 162 GNRGSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQSIVDSRDEATKKHSRDLTGKDR 221
R + + + + KE + + EK + R + + R++ ++ L + R
Sbjct: 880 -EREREREREKEKEKEKEKEKEKEKEKREKEREREKERE-KEKREKERERDREQLEIQQR 937
Query: 222 HADKSGEKSERESKRKHRNRDDEKNRDKSAAKK 254
+ E+ +RE K + R RD E+ RD+ +K
Sbjct: 938 E-QREREREQRE-KSQERERDRERERDRELREK 968
Score = 102 (41.0 bits), Expect = 0.00059, Sum P(4) = 0.00059
Identities = 34/147 (23%), Positives = 68/147 (46%)
Query: 107 NALTKNVDSSRQRDGENRD-LETKLKEDYVAKSNHRRTLKS-EI-RLKDRSPGNEKDRGN 163
N L K + ++ Q + + +D L+ K K K + K EI + K++ EK++
Sbjct: 784 NHLKKELINNHQNNAKEKDVLQEKDKIIQFEKEKEKEKEKEKEIEKEKEKEREREKEK-E 842
Query: 164 RGSDTKLKADVTKETSSKPNVKSEKLIPSQG-RSHNQSIVDSRDEATKKHSRDLTGKDRH 222
R ++T+ + + KE + + EK + R + R+ +K K++
Sbjct: 843 RETETETEKEKEKEKEKEKEKEKEKEKEKEKEREKEREREREREREKEKEKEKEKEKEKE 902
Query: 223 ADKSGEKSERESKRKHRNRDDEKNRDK 249
+K ++ ERE +R+ R+ E+ RD+
Sbjct: 903 KEKREKEREREKEREKEKREKERERDR 929
Score = 61 (26.5 bits), Expect = 3.0e-05, Sum P(4) = 3.0e-05
Identities = 17/54 (31%), Positives = 25/54 (46%)
Query: 842 SEENKSSAKEDLNLEEVNGNSEAFTGASNEMGMQSSAVENGDNENQDPNQGHIF 895
S K + K++L N N+ SN +S N +N+NQ PNQ +F
Sbjct: 1600 SNSEKCNLKDNLYNNSSNNNNNINNNTSNNSNNNNS---NNNNDNQ-PNQNCLF 1649
Score = 61 (26.5 bits), Expect = 3.0e-05, Sum P(4) = 3.0e-05
Identities = 26/111 (23%), Positives = 43/111 (38%)
Query: 316 DREHEGLPSHSTKISSGRQHSDI-DSSRVTGNGLSGHYRRHDGSTSGLGGYSPRKRRTEA 374
+ +E +++ +S + DI D GNG Y DGS G+ K R
Sbjct: 1016 NNNNENNNNNNNNHNSNEKDVDIEDDQSSNGNGEISRYSHRDGS-----GHHHHKHRHHH 1070
Query: 375 AAKTPSPINRSPEKKSAKWDVAPVETYSVPSNVHTSNQAAS-SNAHEMVSS 424
K ++ ++K + + +P NVH S+Q S E +S
Sbjct: 1071 HKKRS---HKHKDRKEHRIKKQRTKVSDLPMNVHDSDQETEDSGPDEQANS 1118
Score = 49 (22.3 bits), Expect = 3.0e-05, Sum P(4) = 3.0e-05
Identities = 9/24 (37%), Positives = 15/24 (62%)
Query: 822 KDSPCAHDDKVTCNIQLEHMSEEN 845
KD ++DDK N QL+H +++
Sbjct: 1199 KDRSISNDDKEKYNQQLQHQQQQH 1222
Score = 42 (19.8 bits), Expect = 0.00014, Sum P(4) = 0.00014
Identities = 11/36 (30%), Positives = 15/36 (41%)
Query: 727 NLTNDETNEKGERLEEVTDHKSIKNNELEILNDSKE 762
N + E+ ER +E K + I ND KE
Sbjct: 1174 NCIKKKEKERNEREKEKLKEKERFEKDRSISNDDKE 1209
>GENEDB_PFALCIPARUM|PFB0680w [details] [associations]
symbol:PFB0680w "hypothetical protein"
species:5833 "Plasmodium falciparum" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0020011 "apicoplast" evidence=RCA] EMBL:AE001362
GenomeReviews:AE001362_GR RefSeq:XP_001349654.2
ProteinModelPortal:O96229 IntAct:O96229 MINT:MINT-1641190
EnsemblProtists:PFB0680w:mRNA GeneID:812736 KEGG:pfa:PFB0680w
EuPathDB:PlasmoDB:PF3D7_0214900 ProtClustDB:CLSZ2848507
Uniprot:O96229
Length = 950
Score = 125 (49.1 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 41/185 (22%), Positives = 84/185 (45%)
Query: 89 DVHTSEEYVKVGSGKKEDNALTKN--VDSSRQRDGENRDLETKLKEDYVAKSNHRRTLKS 146
D H EE K K E+N + + V+ +++ D + K++E + ++ KS
Sbjct: 193 DDHKVEENKKSDDHKVEENKKSDDHKVEENKKSDDHKIEEVKKVEEHEEDEEEDKKEKKS 252
Query: 147 EIRLKDRSPG-NEKDRGNRGSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQS--IVD 203
E + KD + N++D + ++ DV ++ + ++ +K + + I++
Sbjct: 253 ENKNKDENKDENDEDNDEISDEDEVDDDVEEDKNENDDIDDDKKETDKTHLEEEENEIIE 312
Query: 204 S---------RDEATKKHSRDLTGKDRHADKSGEKSERESKRKHRNRDDEKNRDKSAAKK 254
+++ TKK T K++ D EKS+ + K K ++++ EK +DK K
Sbjct: 313 KEFSDKKKNGKNKDTKKEKSKDTEKEKSKDIEKEKSKDKEKEKSKDKEKEKGKDKEKEKS 372
Query: 255 VDLGK 259
D+ K
Sbjct: 373 KDIEK 377
Score = 122 (48.0 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 41/170 (24%), Positives = 74/170 (43%)
Query: 103 KKEDNALTKNVDSSRQRDGENRDLET-KLKEDYVAKSNHRRTLKSEIRLKDRSPGNEKDR 161
++E+N + + S ++++G+N+D + K K+ KS KS+ + K++S EK++
Sbjct: 304 EEEENEIIEKEFSDKKKNGKNKDTKKEKSKDTEKEKSKDIEKEKSKDKEKEKSKDKEKEK 363
Query: 162 GNRGSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQSIVD---SRD-EATKKHSRDLT 217
G K K D+ KE +++ EK + ++ S+D E K D
Sbjct: 364 GKDKEKEKSK-DIEKEKEKDKDIEKEKSKDTAKEKEKDKDIEKEKSKDMEKLKNKQNDEK 422
Query: 218 GKDRHADKSGEKSERESKRKHRN-------RDDEKNRDKSAAKKVDLGKG 260
KD + K +K + N DDE++ D+ K KG
Sbjct: 423 KKDDNEKKKNDKQDIHDDNDDENDMEEIEENDDEEDEDEDMENKKKKKKG 472
Score = 118 (46.6 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 46/165 (27%), Positives = 76/165 (46%)
Query: 113 VDSSRQRD-GENRDLETKLKE-DYV-AKSNHRRTLKSEIRLKDRSPGNEKDRGNRGSDT- 168
VD + D EN D++ KE D + ++ E K ++ N+ + + DT
Sbjct: 277 VDDDVEEDKNENDDIDDDKKETDKTHLEEEENEIIEKEFSDKKKNGKNKDTKKEKSKDTE 336
Query: 169 KLKA-DVTKETSS-KPNVKSEKLIPSQGRSHNQSIVDSRD-EATKKHSRDL-------TG 218
K K+ D+ KE S K KS+ +G+ + S+D E K+ +D+ T
Sbjct: 337 KEKSKDIEKEKSKDKEKEKSKDKEKEKGKDKEKE--KSKDIEKEKEKDKDIEKEKSKDTA 394
Query: 219 KDRHADKSGEKSERESKRKHRNR-DDEKNRDKSAAKKVDLGKGHD 262
K++ DK EK + + K +N+ +DEK +D + KK D HD
Sbjct: 395 KEKEKDKDIEKEKSKDMEKLKNKQNDEKKKDDNEKKKNDKQDIHD 439
Score = 114 (45.2 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 39/160 (24%), Positives = 75/160 (46%)
Query: 103 KKEDNALTKNVDSSRQRDGENRDL---ETKLKEDYVAKSNHRRTLKSEIRLKDRSPGNEK 159
KKE + KN D ++ + E+ D E ++ +D N + + + D++ E+
Sbjct: 247 KKEKKSENKNKDENKDENDEDNDEISDEDEVDDDVEEDKNENDDIDDDKKETDKTHLEEE 306
Query: 160 DRGNRGSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQSIVDSRDEATKKHSRDLTGK 219
+ N + + +D K +K K + + +S + S+D+ +K S+D K
Sbjct: 307 E--NEIIEKEF-SDKKKNGKNKDTKKEKSKDTEKEKSKDIEKEKSKDKEKEK-SKDKE-K 361
Query: 220 DRHADKSGEKSERESKRKHRNRDDEKNRDKSAAKKVDLGK 259
++ DK EKS+ K K +++D EK + K AK+ + K
Sbjct: 362 EKGKDKEKEKSKDIEKEKEKDKDIEKEKSKDTAKEKEKDK 401
Score = 113 (44.8 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 36/169 (21%), Positives = 74/169 (43%)
Query: 89 DVHTSEEYVKVGSGKKEDNALTKNVDSSRQRDGENRDLETKLKEDYVAKSNHRRTLKSEI 148
D H EE K K E+ + + + D + + E K K++ +++ S+
Sbjct: 215 DDHKVEENKKSDDHKIEEVKKVEEHEEDEEEDKKEKKSENKNKDENKDENDEDNDEISDE 274
Query: 149 RLKDRSPGNEKDRGNRGSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQSIVDSRDEA 208
D +K+ + D K + D T + + ++ + N+ + +
Sbjct: 275 DEVDDDVEEDKNENDDIDDDKKETDKTHLEEEENEIIEKEFSDKKKNGKNKDTKKEKSKD 334
Query: 209 TKKH-SRDLTGKDRHADKSGEKSERESKRKHRNRDDEKNRDKSAAKKVD 256
T+K S+D+ K++ DK EKS+ + K K ++++ EK++D K+ D
Sbjct: 335 TEKEKSKDIE-KEKSKDKEKEKSKDKEKEKGKDKEKEKSKDIEKEKEKD 382
Score = 111 (44.1 bits), Expect = 0.00090, Sum P(2) = 0.00090
Identities = 40/184 (21%), Positives = 84/184 (45%)
Query: 93 SEEYVKVGSGKKEDNALTKNVDSSRQRDGENRDLETKLKEDYVAKSNHRRTLKSEIRLKD 152
S+++ KV KK D+ V+ +++ D + K++E + ++ KSE + KD
Sbjct: 203 SDDH-KVEENKKSDD---HKVEENKKSDDHKIEEVKKVEEHEEDEEEDKKEKKSENKNKD 258
Query: 153 RSPG-NEKDRGNRGSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQS--IVDS----- 204
+ N++D + ++ DV ++ + ++ +K + + I++
Sbjct: 259 ENKDENDEDNDEISDEDEVDDDVEEDKNENDDIDDDKKETDKTHLEEEENEIIEKEFSDK 318
Query: 205 ----RDEATKKHSRDLTGKDRHADKSGEKSERESKRKHRNRDDEKNRDKSAAKKVDLGKG 260
+++ TKK T K++ D EKS+ + K K ++++ EK +DK K D+ K
Sbjct: 319 KKNGKNKDTKKEKSKDTEKEKSKDIEKEKSKDKEKEKSKDKEKEKGKDKEKEKSKDIEKE 378
Query: 261 H--D 262
D
Sbjct: 379 KEKD 382
Score = 63 (27.2 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 16/75 (21%), Positives = 35/75 (46%)
Query: 703 GDSNISTIQACEGNENTASAGVGQNLTNDETNEKGERLEEVTDHKSIKNNELEILNDSKE 762
G+ N + ++ NEN G N++ NEK + ++E+ + + E +N + E
Sbjct: 495 GNENENKNESENENENENENENGNENENEKENEKDKNIKEIENVTNANKENYEKINKNSE 554
Query: 763 V-MEAGEVNNVKDNR 776
+ + ++ +NR
Sbjct: 555 ITITKSNIDIYNNNR 569
Score = 62 (26.9 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 41/177 (23%), Positives = 74/177 (41%)
Query: 726 QNLTNDET----NEKGER-LEEVTDHKSIKNNELEILNDSKEVMEAGEVNNVKDNRPASG 780
+N NDE NEK + +++ D +N+ EI + E E ++ N K + G
Sbjct: 415 KNKQNDEKKKDDNEKKKNDKQDIHDDNDDENDMEEIEENDDEEDEDEDMENKKKKK--KG 472
Query: 781 TMGDEPSQLCELDTDMAVEY-QARDSTSEIVSQGVPTQVNTLKDSPCAHDDKVTCNIQLE 839
G+E E ++ E + +E ++ N ++ ++ N + +
Sbjct: 473 KNGNENGN--ENGSENGNENGNENGNENENKNESENENENENENENGNENENEKENEKDK 530
Query: 840 HMSE-ENKSSAKEDLNLEEVNGNSEAFTGASNEMGMQSSAVENGDNENQDPNQGHIF 895
++ E EN ++A ++ N E++N NSE SN N N + D HIF
Sbjct: 531 NIKEIENVTNANKE-NYEKINKNSEITITKSN-----IDIYNNNRNNDIDKVNNHIF 581
Score = 57 (25.1 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 22/76 (28%), Positives = 34/76 (44%)
Query: 701 KYGDSNISTIQACEGNENTASAGVGQNLTNDETNEKGERLEEVTDHKSIKNNELEILNDS 760
K G+ N + + GNEN G +N +E+ + E E ++ + NE E D
Sbjct: 473 KNGNENGNENGSENGNENGNENG-NENENKNESENENEN-ENENENGNENENEKENEKD- 529
Query: 761 KEVMEAGEVNNV-KDN 775
K + E V N K+N
Sbjct: 530 KNIKEIENVTNANKEN 545
Score = 49 (22.3 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 28/133 (21%), Positives = 54/133 (40%)
Query: 714 EGNENTASAGVGQNLTNDETNEKGERLEEVTDHKSIKNNEL----EILNDSKEVMEAGEV 769
E N + +NLT+ +T ++++ HK +KN EL E ++ KE E+
Sbjct: 618 ESNMFNVDKRMHKNLTSMDTILHNLN-DKLSHHKDLKNRELKLKFEAMSRIKEYKIYNEL 676
Query: 770 --NNVKDNRPASGTMGDEPSQLCELDTDMAVEYQARDSTSEIVSQGVPTQVNTLKDSPCA 827
+V+ + DE +L ++ + +Y + P + N L++
Sbjct: 677 IQKSVEILTLRLTKINDELKKLKDISENALQKYINEKGYGLMKHYNFP-EYNKLEEEKIM 735
Query: 828 HDDKVTCNIQLEH 840
K+T N + H
Sbjct: 736 KRSKITWNEKKSH 748
>UNIPROTKB|O96229 [details] [associations]
symbol:RON6 "Rhoptry neck protein 6" species:36329
"Plasmodium falciparum 3D7" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0020011 "apicoplast" evidence=RCA] EMBL:AE001362
GenomeReviews:AE001362_GR RefSeq:XP_001349654.2
ProteinModelPortal:O96229 IntAct:O96229 MINT:MINT-1641190
EnsemblProtists:PFB0680w:mRNA GeneID:812736 KEGG:pfa:PFB0680w
EuPathDB:PlasmoDB:PF3D7_0214900 ProtClustDB:CLSZ2848507
Uniprot:O96229
Length = 950
Score = 125 (49.1 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 41/185 (22%), Positives = 84/185 (45%)
Query: 89 DVHTSEEYVKVGSGKKEDNALTKN--VDSSRQRDGENRDLETKLKEDYVAKSNHRRTLKS 146
D H EE K K E+N + + V+ +++ D + K++E + ++ KS
Sbjct: 193 DDHKVEENKKSDDHKVEENKKSDDHKVEENKKSDDHKIEEVKKVEEHEEDEEEDKKEKKS 252
Query: 147 EIRLKDRSPG-NEKDRGNRGSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQS--IVD 203
E + KD + N++D + ++ DV ++ + ++ +K + + I++
Sbjct: 253 ENKNKDENKDENDEDNDEISDEDEVDDDVEEDKNENDDIDDDKKETDKTHLEEEENEIIE 312
Query: 204 S---------RDEATKKHSRDLTGKDRHADKSGEKSERESKRKHRNRDDEKNRDKSAAKK 254
+++ TKK T K++ D EKS+ + K K ++++ EK +DK K
Sbjct: 313 KEFSDKKKNGKNKDTKKEKSKDTEKEKSKDIEKEKSKDKEKEKSKDKEKEKGKDKEKEKS 372
Query: 255 VDLGK 259
D+ K
Sbjct: 373 KDIEK 377
Score = 122 (48.0 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 41/170 (24%), Positives = 74/170 (43%)
Query: 103 KKEDNALTKNVDSSRQRDGENRDLET-KLKEDYVAKSNHRRTLKSEIRLKDRSPGNEKDR 161
++E+N + + S ++++G+N+D + K K+ KS KS+ + K++S EK++
Sbjct: 304 EEEENEIIEKEFSDKKKNGKNKDTKKEKSKDTEKEKSKDIEKEKSKDKEKEKSKDKEKEK 363
Query: 162 GNRGSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQSIVD---SRD-EATKKHSRDLT 217
G K K D+ KE +++ EK + ++ S+D E K D
Sbjct: 364 GKDKEKEKSK-DIEKEKEKDKDIEKEKSKDTAKEKEKDKDIEKEKSKDMEKLKNKQNDEK 422
Query: 218 GKDRHADKSGEKSERESKRKHRN-------RDDEKNRDKSAAKKVDLGKG 260
KD + K +K + N DDE++ D+ K KG
Sbjct: 423 KKDDNEKKKNDKQDIHDDNDDENDMEEIEENDDEEDEDEDMENKKKKKKG 472
Score = 118 (46.6 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 46/165 (27%), Positives = 76/165 (46%)
Query: 113 VDSSRQRD-GENRDLETKLKE-DYV-AKSNHRRTLKSEIRLKDRSPGNEKDRGNRGSDT- 168
VD + D EN D++ KE D + ++ E K ++ N+ + + DT
Sbjct: 277 VDDDVEEDKNENDDIDDDKKETDKTHLEEEENEIIEKEFSDKKKNGKNKDTKKEKSKDTE 336
Query: 169 KLKA-DVTKETSS-KPNVKSEKLIPSQGRSHNQSIVDSRD-EATKKHSRDL-------TG 218
K K+ D+ KE S K KS+ +G+ + S+D E K+ +D+ T
Sbjct: 337 KEKSKDIEKEKSKDKEKEKSKDKEKEKGKDKEKE--KSKDIEKEKEKDKDIEKEKSKDTA 394
Query: 219 KDRHADKSGEKSERESKRKHRNR-DDEKNRDKSAAKKVDLGKGHD 262
K++ DK EK + + K +N+ +DEK +D + KK D HD
Sbjct: 395 KEKEKDKDIEKEKSKDMEKLKNKQNDEKKKDDNEKKKNDKQDIHD 439
Score = 114 (45.2 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 39/160 (24%), Positives = 75/160 (46%)
Query: 103 KKEDNALTKNVDSSRQRDGENRDL---ETKLKEDYVAKSNHRRTLKSEIRLKDRSPGNEK 159
KKE + KN D ++ + E+ D E ++ +D N + + + D++ E+
Sbjct: 247 KKEKKSENKNKDENKDENDEDNDEISDEDEVDDDVEEDKNENDDIDDDKKETDKTHLEEE 306
Query: 160 DRGNRGSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQSIVDSRDEATKKHSRDLTGK 219
+ N + + +D K +K K + + +S + S+D+ +K S+D K
Sbjct: 307 E--NEIIEKEF-SDKKKNGKNKDTKKEKSKDTEKEKSKDIEKEKSKDKEKEK-SKDKE-K 361
Query: 220 DRHADKSGEKSERESKRKHRNRDDEKNRDKSAAKKVDLGK 259
++ DK EKS+ K K +++D EK + K AK+ + K
Sbjct: 362 EKGKDKEKEKSKDIEKEKEKDKDIEKEKSKDTAKEKEKDK 401
Score = 113 (44.8 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 36/169 (21%), Positives = 74/169 (43%)
Query: 89 DVHTSEEYVKVGSGKKEDNALTKNVDSSRQRDGENRDLETKLKEDYVAKSNHRRTLKSEI 148
D H EE K K E+ + + + D + + E K K++ +++ S+
Sbjct: 215 DDHKVEENKKSDDHKIEEVKKVEEHEEDEEEDKKEKKSENKNKDENKDENDEDNDEISDE 274
Query: 149 RLKDRSPGNEKDRGNRGSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQSIVDSRDEA 208
D +K+ + D K + D T + + ++ + N+ + +
Sbjct: 275 DEVDDDVEEDKNENDDIDDDKKETDKTHLEEEENEIIEKEFSDKKKNGKNKDTKKEKSKD 334
Query: 209 TKKH-SRDLTGKDRHADKSGEKSERESKRKHRNRDDEKNRDKSAAKKVD 256
T+K S+D+ K++ DK EKS+ + K K ++++ EK++D K+ D
Sbjct: 335 TEKEKSKDIE-KEKSKDKEKEKSKDKEKEKGKDKEKEKSKDIEKEKEKD 382
Score = 111 (44.1 bits), Expect = 0.00090, Sum P(2) = 0.00090
Identities = 40/184 (21%), Positives = 84/184 (45%)
Query: 93 SEEYVKVGSGKKEDNALTKNVDSSRQRDGENRDLETKLKEDYVAKSNHRRTLKSEIRLKD 152
S+++ KV KK D+ V+ +++ D + K++E + ++ KSE + KD
Sbjct: 203 SDDH-KVEENKKSDD---HKVEENKKSDDHKIEEVKKVEEHEEDEEEDKKEKKSENKNKD 258
Query: 153 RSPG-NEKDRGNRGSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQS--IVDS----- 204
+ N++D + ++ DV ++ + ++ +K + + I++
Sbjct: 259 ENKDENDEDNDEISDEDEVDDDVEEDKNENDDIDDDKKETDKTHLEEEENEIIEKEFSDK 318
Query: 205 ----RDEATKKHSRDLTGKDRHADKSGEKSERESKRKHRNRDDEKNRDKSAAKKVDLGKG 260
+++ TKK T K++ D EKS+ + K K ++++ EK +DK K D+ K
Sbjct: 319 KKNGKNKDTKKEKSKDTEKEKSKDIEKEKSKDKEKEKSKDKEKEKGKDKEKEKSKDIEKE 378
Query: 261 H--D 262
D
Sbjct: 379 KEKD 382
Score = 63 (27.2 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 16/75 (21%), Positives = 35/75 (46%)
Query: 703 GDSNISTIQACEGNENTASAGVGQNLTNDETNEKGERLEEVTDHKSIKNNELEILNDSKE 762
G+ N + ++ NEN G N++ NEK + ++E+ + + E +N + E
Sbjct: 495 GNENENKNESENENENENENENGNENENEKENEKDKNIKEIENVTNANKENYEKINKNSE 554
Query: 763 V-MEAGEVNNVKDNR 776
+ + ++ +NR
Sbjct: 555 ITITKSNIDIYNNNR 569
Score = 62 (26.9 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 41/177 (23%), Positives = 74/177 (41%)
Query: 726 QNLTNDET----NEKGER-LEEVTDHKSIKNNELEILNDSKEVMEAGEVNNVKDNRPASG 780
+N NDE NEK + +++ D +N+ EI + E E ++ N K + G
Sbjct: 415 KNKQNDEKKKDDNEKKKNDKQDIHDDNDDENDMEEIEENDDEEDEDEDMENKKKKK--KG 472
Query: 781 TMGDEPSQLCELDTDMAVEY-QARDSTSEIVSQGVPTQVNTLKDSPCAHDDKVTCNIQLE 839
G+E E ++ E + +E ++ N ++ ++ N + +
Sbjct: 473 KNGNENGN--ENGSENGNENGNENGNENENKNESENENENENENENGNENENEKENEKDK 530
Query: 840 HMSE-ENKSSAKEDLNLEEVNGNSEAFTGASNEMGMQSSAVENGDNENQDPNQGHIF 895
++ E EN ++A ++ N E++N NSE SN N N + D HIF
Sbjct: 531 NIKEIENVTNANKE-NYEKINKNSEITITKSN-----IDIYNNNRNNDIDKVNNHIF 581
Score = 57 (25.1 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 22/76 (28%), Positives = 34/76 (44%)
Query: 701 KYGDSNISTIQACEGNENTASAGVGQNLTNDETNEKGERLEEVTDHKSIKNNELEILNDS 760
K G+ N + + GNEN G +N +E+ + E E ++ + NE E D
Sbjct: 473 KNGNENGNENGSENGNENGNENG-NENENKNESENENEN-ENENENGNENENEKENEKD- 529
Query: 761 KEVMEAGEVNNV-KDN 775
K + E V N K+N
Sbjct: 530 KNIKEIENVTNANKEN 545
Score = 49 (22.3 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 28/133 (21%), Positives = 54/133 (40%)
Query: 714 EGNENTASAGVGQNLTNDETNEKGERLEEVTDHKSIKNNEL----EILNDSKEVMEAGEV 769
E N + +NLT+ +T ++++ HK +KN EL E ++ KE E+
Sbjct: 618 ESNMFNVDKRMHKNLTSMDTILHNLN-DKLSHHKDLKNRELKLKFEAMSRIKEYKIYNEL 676
Query: 770 --NNVKDNRPASGTMGDEPSQLCELDTDMAVEYQARDSTSEIVSQGVPTQVNTLKDSPCA 827
+V+ + DE +L ++ + +Y + P + N L++
Sbjct: 677 IQKSVEILTLRLTKINDELKKLKDISENALQKYINEKGYGLMKHYNFP-EYNKLEEEKIM 735
Query: 828 HDDKVTCNIQLEH 840
K+T N + H
Sbjct: 736 KRSKITWNEKKSH 748
>TAIR|locus:2076121 [details] [associations]
symbol:AT3G23900 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008150 "biological_process" evidence=ND] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0000226 "microtubule cytoskeleton
organization" evidence=RCA] [GO:0000911 "cytokinesis by cell plate
formation" evidence=RCA] [GO:0007155 "cell adhesion" evidence=RCA]
[GO:0009887 "organ morphogenesis" evidence=RCA] [GO:0009888 "tissue
development" evidence=RCA] [GO:0010090 "trichome morphogenesis"
evidence=RCA] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=RCA] [GO:0010638 "positive
regulation of organelle organization" evidence=RCA] [GO:0016926
"protein desumoylation" evidence=RCA] [GO:0033044 "regulation of
chromosome organization" evidence=RCA] [GO:0045010 "actin
nucleation" evidence=RCA] [GO:0050665 "hydrogen peroxide
biosynthetic process" evidence=RCA] InterPro:IPR000504
InterPro:IPR000571 InterPro:IPR001298 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 PROSITE:PS50103 SMART:SM00360
SMART:SM00557 EMBL:CP002686 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0000166 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.70.330
GO:GO:0003723 InterPro:IPR014756 SUPFAM:SSF81296 InterPro:IPR017868
Pfam:PF00630 PROSITE:PS50194 IPI:IPI00521323 RefSeq:NP_001189958.1
RefSeq:NP_189032.2 UniGene:At.37625 UniGene:At.73245
ProteinModelPortal:F4J5A7 SMR:F4J5A7 PRIDE:F4J5A7
EnsemblPlants:AT3G23900.1 EnsemblPlants:AT3G23900.3 GeneID:821973
KEGG:ath:AT3G23900 OMA:HIAYVEY Uniprot:F4J5A7
Length = 987
Score = 127 (49.8 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 46/178 (25%), Positives = 79/178 (44%)
Query: 102 GKKEDNALTKNVDSSRQ--RDGENRDLETKLKEDYVAKSNHRRTLKSEI-RLK-DRSPGN 157
G++ ++++ SR+ R E+ ++ K SE+ RL+ D S
Sbjct: 562 GRRRSYRDSRDISESRRYGRSDEHHSSSSRRSRSVSPKKRKSGQEDSELSRLRRDSSSRG 621
Query: 158 EKDRGNRGSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQSIVDS-------RDEATK 210
EK GS + + KE S P E + + RS ++S+ DS RDE K
Sbjct: 622 EKKSSRAGSRSPRRR---KEVKSTPRDDEENKVKRRTRSRSRSVEDSADIKDKSRDEELK 678
Query: 211 KH---SRDLTGKDRHADKSGEKSERESKRKHRNRDDEKN--RDKSAAKKVDLGKGHDL 263
H SR + +DR + ++ E+K+KHR R ++ D + + VD+ + +DL
Sbjct: 679 HHKKRSRSRSREDRSKTRDTSRNSDEAKQKHRQRSRSRSLENDNGSHENVDVAQDNDL 736
Score = 61 (26.5 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 36/170 (21%), Positives = 68/170 (40%)
Query: 317 REHEGLPSHSTKISSGRQHSDIDSSRVTGNGLSGHYRRHDGSTSGLGGYSPRKRRTEAAA 376
+ G S S S G+Q DI SS + ++RH S S S R +R++
Sbjct: 814 KRRSGRRSRSPS-SEGKQGRDIRSSPGYSDEKKSRHKRHSRSRSIEKKNSSRDKRSKRHE 872
Query: 377 KTPSPINRSPEKKSAKWDVAPV--ETYSVPSNVHTSNQAASSNAH-EMVSSDPVTSTTQK 433
+ S + +K+ ++PV E + + H+ +++ H + D + +
Sbjct: 873 RLRSS-SPGRDKRRGDRSLSPVSSEDHKIKKR-HSGSKSVKEKPHSDYEKVDDGDANSDS 930
Query: 434 PLAGISVSASLAKLN-VSMDSVQLTQSNRPMRRLCVENLPLSASEKALME 482
++ L L+ +S V+ ++ N P VE + EK +E
Sbjct: 931 SQQERNLEGHLLSLDSMSSQDVEKSKENPPSSS-SVERGDANDDEKFKIE 979
Score = 47 (21.6 bits), Expect = 0.00088, Sum P(2) = 0.00088
Identities = 15/50 (30%), Positives = 26/50 (52%)
Query: 843 EENKSSAKEDLNLE----EVNGNSEAFTGASNEMGMQSSAVENGD-NENQ 887
+ N S++++ NLE ++ S S E SS+VE GD N+++
Sbjct: 925 DANSDSSQQERNLEGHLLSLDSMSSQDVEKSKENPPSSSSVERGDANDDE 974
>DICTYBASE|DDB_G0287951 [details] [associations]
symbol:DDB_G0287951 "unknown" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND]
dictyBase:DDB_G0287951 eggNOG:NOG271996 InterPro:IPR013246
InterPro:IPR013243 Pfam:PF08209 PROSITE:PS51505 EMBL:AAFI02000105
RefSeq:XP_636971.1 ProteinModelPortal:Q54JM6
EnsemblProtists:DDB0238210 GeneID:8626380 KEGG:ddi:DDB_G0287951
OMA:RSARKQN Uniprot:Q54JM6
Length = 1447
Score = 119 (46.9 bits), Expect = 4.0e-05, Sum P(3) = 4.0e-05
Identities = 37/161 (22%), Positives = 71/161 (44%)
Query: 95 EYVKVGSGKKEDNALTKNVDSSRQRDGENRDLETKLKEDYVAKSNHRRTLKSEIRLKDRS 154
+Y + + D ++ D R RD +RD + K +DY +++ + K + R +DR
Sbjct: 513 DYKSIDRDRDRDRDRDRDRDRDRDRD-RDRDRDYKDYKDY---KDYKLSEKDKERDRDRD 568
Query: 155 PGNEKDRG-NRGSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQSIVDSRDEATKKHS 213
++DR +R D D +E + ++ + + + RD+ K
Sbjct: 569 RDRDRDRDRDRDRDRDRDRDRDRERDRDRDRDRDR---DREKDREKERDKERDKDKDKEK 625
Query: 214 RDLTGKDRHADKSGEKSERESKRKHRNRDDEKNRDKSAAKK 254
KDR +K EK + + K K +++D EK++ K+ K
Sbjct: 626 EKEKDKDRDKEKEKEKDKEKEKEKDKDKDKEKDKPKNIISK 666
Score = 112 (44.5 bits), Expect = 0.00021, Sum P(3) = 0.00021
Identities = 55/240 (22%), Positives = 98/240 (40%)
Query: 20 ADSNEGSAARTRPFSFDEIMIRRKTKNLSENIKEDAMDVSNIPGDCTIENVXXXXXXXXX 79
+ S+ SA S I TKNLS ++ + P T NV
Sbjct: 406 SSSSNTSAVSNISSSSSSINSGSNTKNLSSPTSSESKSERSSPILST-SNVSTSSSSIPT 464
Query: 80 XXXXXXPGVDVHTSEEYVKVGSGKKEDNALTKNVDSSRQRDGENRDLETKLKEDYVAKSN 139
+ S + V SGK + + K+ D + RD ++RD + K DY K
Sbjct: 465 SSL-------IKKSSSSIGV-SGKSDKDY--KDRDY-KDRDYKDRDYKEK-DRDYKEKDR 512
Query: 140 HRRTL-KSEIRLKDRSPGNEKDRG-NRGSDTKLKADVTKETSSKPNVKSEKLIPSQGRSH 197
+++ + R +DR ++DR +R D K D K + K ++ + R
Sbjct: 513 DYKSIDRDRDRDRDRDRDRDRDRDRDRDRDRDYK-DYKDYKDYKLSEKDKERDRDRDRDR 571
Query: 198 NQSIVDSRD-EATKKHSRDLTGKDRHADKSGEKSERESKRKHRNRDDEKNRDKSAAKKVD 256
++ RD + + RD +DR D+ ++ + + K R+++ +K++DK K+ D
Sbjct: 572 DRDRDRDRDRDRDRDRDRDRE-RDRDRDRDRDRDREKDREKERDKERDKDKDKEKEKEKD 630
Score = 78 (32.5 bits), Expect = 4.0e-05, Sum P(3) = 4.0e-05
Identities = 50/210 (23%), Positives = 86/210 (40%)
Query: 692 GSVKSVNVVKYGDSNISTIQACEGNENTASAGVGQNLTNDETNE-------KGERLEEVT 744
GS S N + +N +T N NT +G N N+E ++ K + + T
Sbjct: 1231 GS-NSTNNINGNGNNTNTNGVNNNNNNTNISGGSINSENEEDSDDDYDPSNKKSKSKRKT 1289
Query: 745 DHKSIKNNELEILNDSKEVMEAGEVNNVKDNRPASGTMGDEPSQLCELDTDMAVEYQARD 804
K+ + ++ L+ K + V N +G M + + C TD E + R
Sbjct: 1290 KSKAYSLDAVKSLSFEKIQSLLSRICGVVSNN--TGKMCTKTLK-CPQHTDSQRE-KLRI 1345
Query: 805 STSEIVSQGVPTQVNT----LKDSPCAHDD--KVTCNIQLEHMSEENKSSAKEDLNLEEV 858
S ++++ PTQ T +P +VT QL++ SE+ S E ++ ++
Sbjct: 1346 SL-KLITPTPPTQTQTPTPPQTPTPTTQTSVKRVTKRQQLQNESEDQ--SPNEFVDTDD- 1401
Query: 859 NGNSEAFTGASNEMGMQSSAVENGDNENQD 888
N N +N M + ++N DN N D
Sbjct: 1402 NNNDNTNNNNNNNNNMDN--IDNMDNNNND 1429
Score = 41 (19.5 bits), Expect = 4.0e-05, Sum P(3) = 4.0e-05
Identities = 12/44 (27%), Positives = 19/44 (43%)
Query: 400 TYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSAS 443
T+ + TS Q ++S + T+TT K S S+S
Sbjct: 986 TFQTETEKDTSAQTSTSTSIPTTIESTTTNTTTKTTNSSSSSSS 1029
>GENEDB_PFALCIPARUM|PF14_0404 [details] [associations]
symbol:PF14_0404 "hypothetical protein"
species:5833 "Plasmodium falciparum" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0020011 "apicoplast" evidence=RCA] EMBL:AE014187
GenomeReviews:AE014187_GR RefSeq:XP_001348578.2
ProteinModelPortal:Q8IL45 EnsemblProtists:PF14_0404:mRNA
GeneID:811986 KEGG:pfa:PF14_0404 EuPathDB:PlasmoDB:PF3D7_1442600
Uniprot:Q8IL45
Length = 3543
Score = 105 (42.0 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 38/174 (21%), Positives = 77/174 (44%)
Query: 93 SEEYVK-VGSGKKEDNALTKNVDSSRQRDGENRDLETKLKEDYVAKSNHRRTLKSEIRLK 151
+EEYV VGSG+ + + N + + G+N++ + ED + + + SE
Sbjct: 1230 NEEYVTDVGSGENKVSEGNSNDNIMPEEYGKNKNSQEN-SEDNIMTEKNGKNKSSEENTD 1288
Query: 152 DR--SPGNEKDRGNR--GSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQSIVDSRDE 207
D + N KD+ + +D + K SS+ N+ + G+++N +
Sbjct: 1289 DNIMTEKNGKDKSSEENANDNIMTEKNGKNKSSQGNIDDNIMTEKNGKNNNSQENSDDNI 1348
Query: 208 ATKKHSRDLTGKDRHADKSGEKSERESKRKHRNRDD----EKN-RDKSAAKKVD 256
T+++ ++ ++ D + ++K N DD EKN +DKS+ + +
Sbjct: 1349 MTEEYEKNKNSQENTDDNIMTEKNGKNKSSEENTDDNIMTEKNGKDKSSEENAN 1402
Score = 101 (40.6 bits), Expect = 8.8e-05, Sum P(2) = 8.8e-05
Identities = 39/184 (21%), Positives = 76/184 (41%)
Query: 93 SEEYVKVGSGKKEDNALTKNVDSSRQRD---GENRDLETKLKEDYVAKSNHRRTLKSEIR 149
+E+ +K G+ K + K ++ + ++ G N+D++ + E + + N +E
Sbjct: 2754 NEKEIKEGNDKIFEEGNYKEINEGKNKEFEEGNNKDVKEE-NEKEINEGNEEEI--NEGN 2810
Query: 150 LKDRSPGNEKD--RGN-----RGSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQSIV 202
K+ GNEK+ GN G+D ++K KE K E+ I Q N +
Sbjct: 2811 EKEIKEGNEKEIKEGNDKKFEEGNDKEIKEGNDKEIKEGDYKKFEEEIEKQIEEGNDKEI 2870
Query: 203 DSRDEATKKHSRDLT---GKDRHADKSGEKSERESKRKHRNRDDEKNRDKSAAKKVDLGK 259
+ E + + D G D+ + EK E K + K ++ K+++ G
Sbjct: 2871 EEEIEKKIEEANDKKFEEGNDKEIKEGNEKEINEGNDKEIKEGEYKKFEEETEKQIEEGN 2930
Query: 260 GHDL 263
++
Sbjct: 2931 DKEI 2934
Score = 99 (39.9 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 33/168 (19%), Positives = 76/168 (45%)
Query: 100 GSGKKEDNALTKNVDSSRQRD---GENRDLETKLKEDYVAKSNHRRTLKSEIRLKDRSPG 156
G K+ + K + R ++ G N++ E + +++ N +K+ +
Sbjct: 2617 GRNKEFEEGRNKEFEDGRNKEFEEGRNKEFEERRNKEFEEGRNKEFEEGKNKEIKEVNDK 2676
Query: 157 NEKDRGNRGSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQSIVDSRD-EATKKHSRD 215
++ N+ K V ++ K N + EKLI +G + + I + R+ E +++ ++
Sbjct: 2677 KFEEGKNKEIKEGNKKKVQEQNDKKFNEEIEKLI-EEG--NEKEIKEGRNKEIRERNDKE 2733
Query: 216 LT-GKDRHADKSGEKSERESKRKHRNRDDEKNRDKSAAKKVDLGKGHD 262
+ G D++ +K EK E+ K ++K ++ K+++ GK +
Sbjct: 2734 INEGNDKNFEKEIEKQSEEANEKEIKEGNDKIFEEGNYKEINEGKNKE 2781
Score = 95 (38.5 bits), Expect = 8.8e-05, Sum P(2) = 8.8e-05
Identities = 49/186 (26%), Positives = 82/186 (44%)
Query: 714 EGNENTASAG---VGQNLTNDETNE-KGERLEEVTDHKSIKN-NELEILN-DSKEVMEAG 767
EGN+ G V + N E E K ++ EEV + K IK NE EI + KE+ E G
Sbjct: 3096 EGNKKVVEEGNKKVVEGGRNKEFEEGKNKQFEEVMN-KVIKEGNEKEINEGNDKEINE-G 3153
Query: 768 EVNNVKDNRPASGTMGDEPSQLCELDT---DMAVEYQARDSTSEIVSQGVPTQVNTLKDS 824
E ++ G++ ++ E D + +E Q + ++++ +G ++N D
Sbjct: 3154 EYKKFEEETEKQIEEGND-KEIKEGDHKKFEEKIEKQVEEGMNKVIKEGNEKEINEGNDK 3212
Query: 825 PCAHDDKVTCNIQLEHMSE-ENKSSAKE--DLNLEEVNGNSEAFTGASN--EMGMQSSAV 879
+ ++E E EN KE D ++E N + E G +N E+G +
Sbjct: 3213 EIKEGEYKKFEEEIEKQIEKENNKEIKELNDKKIKEAN-DKEINEGNNNTIEVGTEK--- 3268
Query: 880 ENGDNE 885
EN D +
Sbjct: 3269 ENKDKK 3274
Score = 95 (38.5 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 38/173 (21%), Positives = 73/173 (42%)
Query: 89 DVHTSEEYVKVGSG---KKEDNALTKNVDSSRQRDGENRDL--ETKLKEDYVAKSNHRRT 143
D+ ++EE+ K+ S +KE T+ + N D + K+KE+ N
Sbjct: 2443 DISSNEEHKKINSNFNDEKEIKNNTREIPIMEHNFNTNMDSVNDDKIKEEMSHIKNMEYV 2502
Query: 144 LKSEIRLKDRSPGNEKDRGNRGSDTKLKADVTKETS-SKPNVKSEKLIPSQGRSHNQSIV 202
+ S ++ D +P + + G + +K ++ ++T K N K ++ Q I
Sbjct: 2503 VDSFDKI-DNAPNEQNIIDHNGKHSVIKGEIKEDTKHEKENAK--QMNEEIKNVKEQEIE 2559
Query: 203 DSRDEATKKHSRDLT--GKDRHADKSGEKSERESKRKH----RNRDDEKNRDK 249
R TK+ GK++ ++ K E + K RN++ E+ R+K
Sbjct: 2560 HERKNETKEEKEQSIKEGKNKEFEEGRNKEFEEGRNKEFEEGRNKEFEEGRNK 2612
Score = 94 (38.1 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 41/202 (20%), Positives = 89/202 (44%)
Query: 698 NVVKYGDSNISTIQACEGNENTASAGVGQNLTND---ETNEKGERLEE-VTDHK-SIKNN 752
N+V GD+ I +E+ G G+N+ +D E N + + EE + + K S K
Sbjct: 1613 NIVS-GDNEEKGISVKNISEDIIPDGKGKNIQDDIILEENGENKNFEENIEEDKISDKTQ 1671
Query: 753 ELEILNDSKE----VMEAGEVNNVKDNRPASGTMGDEPSQLCELDTDMAVEYQARDSTSE 808
+ +I +++ E E+G+ N + D + D + + + + ++ D+ ++
Sbjct: 1672 KSKISHENAEGHFTPYESGK-NKISDENDVEYNISDINTNKDQEEVESKRIFETNDNINK 1730
Query: 809 IVSQGVPTQVNTLKDSPC----AHDDKVTCNIQLEHMSEENKSSAKEDLN-LEEVNGNSE 863
+S ++N +K + + D + + +L+ + + ++ E L ++E NGN+
Sbjct: 1731 HISSSDNNKINKMKQNNILINESQDKNIDVHNKLDKILKNEHVTSDESLEKIKEENGNTR 1790
Query: 864 AFTGASNEMGMQSSAVENGDNE 885
G+ N EN N+
Sbjct: 1791 KNKGSINNEEKIEEEKENVKND 1812
Score = 92 (37.4 bits), Expect = 0.00074, Sum P(2) = 0.00074
Identities = 35/176 (19%), Positives = 77/176 (43%)
Query: 93 SEEYVKVGSGKKEDNALTKNVDSSRQRD---GENRDLETKLKEDYVAKSNHRRTLKSEIR 149
+++ +K G KK + K ++ ++ GE + E + E + + N + ++ EI
Sbjct: 2906 NDKEIKEGEYKKFEEETEKQIEEGNDKEIKEGEYKKFEEET-EKQIEEGNDKE-IEEEIE 2963
Query: 150 LKDRSPGNEKDRGNRGSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHN-QSIVDSRDEA 208
K NEK + +D K + KE + + + +K + N + + D+
Sbjct: 2964 KKIEE-ANEK-KIKEENDKKFEEGNDKEVKEENDKEVKKGNDKEFEEGNDKKFEEGNDKE 3021
Query: 209 TKK-HSRDLT-GKDRHADKSGEKSERESKRKHRNRDDEKNRDKSAAKKVDLGKGHD 262
K+ + +++ G ++ + EK +E K ++KN ++ KK + GK +
Sbjct: 3022 IKEGNEKEIKEGNEKEIKEGNEKEIKEGNEKEIKEGNDKNFEEDDYKKFEEGKNKE 3077
Score = 38 (18.4 bits), Expect = 0.00065, Sum P(3) = 0.00065
Identities = 9/46 (19%), Positives = 20/46 (43%)
Query: 389 KSAKWDVAPV-ETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQK 433
K+ D+ P + ++ ++ + N E + D ++ TQK
Sbjct: 1627 KNISEDIIPDGKGKNIQDDIILEENGENKNFEENIEEDKISDKTQK 1672
>UNIPROTKB|Q8IL45 [details] [associations]
symbol:TREP "TRAP-related protein" species:36329
"Plasmodium falciparum 3D7" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0020011 "apicoplast" evidence=RCA] EMBL:AE014187
GenomeReviews:AE014187_GR RefSeq:XP_001348578.2
ProteinModelPortal:Q8IL45 EnsemblProtists:PF14_0404:mRNA
GeneID:811986 KEGG:pfa:PF14_0404 EuPathDB:PlasmoDB:PF3D7_1442600
Uniprot:Q8IL45
Length = 3543
Score = 105 (42.0 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 38/174 (21%), Positives = 77/174 (44%)
Query: 93 SEEYVK-VGSGKKEDNALTKNVDSSRQRDGENRDLETKLKEDYVAKSNHRRTLKSEIRLK 151
+EEYV VGSG+ + + N + + G+N++ + ED + + + SE
Sbjct: 1230 NEEYVTDVGSGENKVSEGNSNDNIMPEEYGKNKNSQEN-SEDNIMTEKNGKNKSSEENTD 1288
Query: 152 DR--SPGNEKDRGNR--GSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQSIVDSRDE 207
D + N KD+ + +D + K SS+ N+ + G+++N +
Sbjct: 1289 DNIMTEKNGKDKSSEENANDNIMTEKNGKNKSSQGNIDDNIMTEKNGKNNNSQENSDDNI 1348
Query: 208 ATKKHSRDLTGKDRHADKSGEKSERESKRKHRNRDD----EKN-RDKSAAKKVD 256
T+++ ++ ++ D + ++K N DD EKN +DKS+ + +
Sbjct: 1349 MTEEYEKNKNSQENTDDNIMTEKNGKNKSSEENTDDNIMTEKNGKDKSSEENAN 1402
Score = 101 (40.6 bits), Expect = 8.8e-05, Sum P(2) = 8.8e-05
Identities = 39/184 (21%), Positives = 76/184 (41%)
Query: 93 SEEYVKVGSGKKEDNALTKNVDSSRQRD---GENRDLETKLKEDYVAKSNHRRTLKSEIR 149
+E+ +K G+ K + K ++ + ++ G N+D++ + E + + N +E
Sbjct: 2754 NEKEIKEGNDKIFEEGNYKEINEGKNKEFEEGNNKDVKEE-NEKEINEGNEEEI--NEGN 2810
Query: 150 LKDRSPGNEKD--RGN-----RGSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQSIV 202
K+ GNEK+ GN G+D ++K KE K E+ I Q N +
Sbjct: 2811 EKEIKEGNEKEIKEGNDKKFEEGNDKEIKEGNDKEIKEGDYKKFEEEIEKQIEEGNDKEI 2870
Query: 203 DSRDEATKKHSRDLT---GKDRHADKSGEKSERESKRKHRNRDDEKNRDKSAAKKVDLGK 259
+ E + + D G D+ + EK E K + K ++ K+++ G
Sbjct: 2871 EEEIEKKIEEANDKKFEEGNDKEIKEGNEKEINEGNDKEIKEGEYKKFEEETEKQIEEGN 2930
Query: 260 GHDL 263
++
Sbjct: 2931 DKEI 2934
Score = 99 (39.9 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 33/168 (19%), Positives = 76/168 (45%)
Query: 100 GSGKKEDNALTKNVDSSRQRD---GENRDLETKLKEDYVAKSNHRRTLKSEIRLKDRSPG 156
G K+ + K + R ++ G N++ E + +++ N +K+ +
Sbjct: 2617 GRNKEFEEGRNKEFEDGRNKEFEEGRNKEFEERRNKEFEEGRNKEFEEGKNKEIKEVNDK 2676
Query: 157 NEKDRGNRGSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQSIVDSRD-EATKKHSRD 215
++ N+ K V ++ K N + EKLI +G + + I + R+ E +++ ++
Sbjct: 2677 KFEEGKNKEIKEGNKKKVQEQNDKKFNEEIEKLI-EEG--NEKEIKEGRNKEIRERNDKE 2733
Query: 216 LT-GKDRHADKSGEKSERESKRKHRNRDDEKNRDKSAAKKVDLGKGHD 262
+ G D++ +K EK E+ K ++K ++ K+++ GK +
Sbjct: 2734 INEGNDKNFEKEIEKQSEEANEKEIKEGNDKIFEEGNYKEINEGKNKE 2781
Score = 95 (38.5 bits), Expect = 8.8e-05, Sum P(2) = 8.8e-05
Identities = 49/186 (26%), Positives = 82/186 (44%)
Query: 714 EGNENTASAG---VGQNLTNDETNE-KGERLEEVTDHKSIKN-NELEILN-DSKEVMEAG 767
EGN+ G V + N E E K ++ EEV + K IK NE EI + KE+ E G
Sbjct: 3096 EGNKKVVEEGNKKVVEGGRNKEFEEGKNKQFEEVMN-KVIKEGNEKEINEGNDKEINE-G 3153
Query: 768 EVNNVKDNRPASGTMGDEPSQLCELDT---DMAVEYQARDSTSEIVSQGVPTQVNTLKDS 824
E ++ G++ ++ E D + +E Q + ++++ +G ++N D
Sbjct: 3154 EYKKFEEETEKQIEEGND-KEIKEGDHKKFEEKIEKQVEEGMNKVIKEGNEKEINEGNDK 3212
Query: 825 PCAHDDKVTCNIQLEHMSE-ENKSSAKE--DLNLEEVNGNSEAFTGASN--EMGMQSSAV 879
+ ++E E EN KE D ++E N + E G +N E+G +
Sbjct: 3213 EIKEGEYKKFEEEIEKQIEKENNKEIKELNDKKIKEAN-DKEINEGNNNTIEVGTEK--- 3268
Query: 880 ENGDNE 885
EN D +
Sbjct: 3269 ENKDKK 3274
Score = 95 (38.5 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 38/173 (21%), Positives = 73/173 (42%)
Query: 89 DVHTSEEYVKVGSG---KKEDNALTKNVDSSRQRDGENRDL--ETKLKEDYVAKSNHRRT 143
D+ ++EE+ K+ S +KE T+ + N D + K+KE+ N
Sbjct: 2443 DISSNEEHKKINSNFNDEKEIKNNTREIPIMEHNFNTNMDSVNDDKIKEEMSHIKNMEYV 2502
Query: 144 LKSEIRLKDRSPGNEKDRGNRGSDTKLKADVTKETS-SKPNVKSEKLIPSQGRSHNQSIV 202
+ S ++ D +P + + G + +K ++ ++T K N K ++ Q I
Sbjct: 2503 VDSFDKI-DNAPNEQNIIDHNGKHSVIKGEIKEDTKHEKENAK--QMNEEIKNVKEQEIE 2559
Query: 203 DSRDEATKKHSRDLT--GKDRHADKSGEKSERESKRKH----RNRDDEKNRDK 249
R TK+ GK++ ++ K E + K RN++ E+ R+K
Sbjct: 2560 HERKNETKEEKEQSIKEGKNKEFEEGRNKEFEEGRNKEFEEGRNKEFEEGRNK 2612
Score = 94 (38.1 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 41/202 (20%), Positives = 89/202 (44%)
Query: 698 NVVKYGDSNISTIQACEGNENTASAGVGQNLTND---ETNEKGERLEE-VTDHK-SIKNN 752
N+V GD+ I +E+ G G+N+ +D E N + + EE + + K S K
Sbjct: 1613 NIVS-GDNEEKGISVKNISEDIIPDGKGKNIQDDIILEENGENKNFEENIEEDKISDKTQ 1671
Query: 753 ELEILNDSKE----VMEAGEVNNVKDNRPASGTMGDEPSQLCELDTDMAVEYQARDSTSE 808
+ +I +++ E E+G+ N + D + D + + + + ++ D+ ++
Sbjct: 1672 KSKISHENAEGHFTPYESGK-NKISDENDVEYNISDINTNKDQEEVESKRIFETNDNINK 1730
Query: 809 IVSQGVPTQVNTLKDSPC----AHDDKVTCNIQLEHMSEENKSSAKEDLN-LEEVNGNSE 863
+S ++N +K + + D + + +L+ + + ++ E L ++E NGN+
Sbjct: 1731 HISSSDNNKINKMKQNNILINESQDKNIDVHNKLDKILKNEHVTSDESLEKIKEENGNTR 1790
Query: 864 AFTGASNEMGMQSSAVENGDNE 885
G+ N EN N+
Sbjct: 1791 KNKGSINNEEKIEEEKENVKND 1812
Score = 92 (37.4 bits), Expect = 0.00074, Sum P(2) = 0.00074
Identities = 35/176 (19%), Positives = 77/176 (43%)
Query: 93 SEEYVKVGSGKKEDNALTKNVDSSRQRD---GENRDLETKLKEDYVAKSNHRRTLKSEIR 149
+++ +K G KK + K ++ ++ GE + E + E + + N + ++ EI
Sbjct: 2906 NDKEIKEGEYKKFEEETEKQIEEGNDKEIKEGEYKKFEEET-EKQIEEGNDKE-IEEEIE 2963
Query: 150 LKDRSPGNEKDRGNRGSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHN-QSIVDSRDEA 208
K NEK + +D K + KE + + + +K + N + + D+
Sbjct: 2964 KKIEE-ANEK-KIKEENDKKFEEGNDKEVKEENDKEVKKGNDKEFEEGNDKKFEEGNDKE 3021
Query: 209 TKK-HSRDLT-GKDRHADKSGEKSERESKRKHRNRDDEKNRDKSAAKKVDLGKGHD 262
K+ + +++ G ++ + EK +E K ++KN ++ KK + GK +
Sbjct: 3022 IKEGNEKEIKEGNEKEIKEGNEKEIKEGNEKEIKEGNDKNFEEDDYKKFEEGKNKE 3077
Score = 38 (18.4 bits), Expect = 0.00065, Sum P(3) = 0.00065
Identities = 9/46 (19%), Positives = 20/46 (43%)
Query: 389 KSAKWDVAPV-ETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQK 433
K+ D+ P + ++ ++ + N E + D ++ TQK
Sbjct: 1627 KNISEDIIPDGKGKNIQDDIILEENGENKNFEENIEEDKISDKTQK 1672
>ZFIN|ZDB-GENE-040426-1146 [details] [associations]
symbol:traf3ip1 "TNF receptor-associated factor 3
interacting protein 1" species:7955 "Danio rerio" [GO:0008017
"microtubule binding" evidence=IEA] [GO:0048793 "pronephros
development" evidence=IMP] [GO:0042384 "cilium assembly"
evidence=IGI;ISS;IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton"
evidence=IEA] InterPro:IPR018799 ZFIN:ZDB-GENE-040426-1146
GO:GO:0005737 GO:GO:0005856 GO:GO:0042384 GO:GO:0048793
EMBL:BC056776 IPI:IPI00509049 RefSeq:NP_956894.1 UniGene:Dr.18537
ProteinModelPortal:Q6PGZ3 SMR:Q6PGZ3 STRING:Q6PGZ3 GeneID:393572
KEGG:dre:393572 CTD:26146 eggNOG:NOG304934 HOGENOM:HOG000007159
HOVERGEN:HBG101388 InParanoid:Q6PGZ3 OrthoDB:EOG40S0GB
NextBio:20814593 PANTHER:PTHR31363 Uniprot:Q6PGZ3
Length = 629
Score = 116 (45.9 bits), Expect = 4.7e-05, Sum P(3) = 4.7e-05
Identities = 36/166 (21%), Positives = 74/166 (44%)
Query: 92 TSEEYVK-VGSGKKEDNALTKNVDSSRQRDGENRDLETKLKEDYVAKSNHRRTLKSEIRL 150
+S+E VK V +G K D +SR +D ENR+ +E + + + +S
Sbjct: 120 SSDEAVKRVLAGDKLDQK--GKPSTSRSQDKENREG----REHHRDREERKGIKESSGSR 173
Query: 151 KDRSPGNEKDRGNRGSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQSIVDSRDEATK 210
+ + P KD+ ++ D + D + + +++ + +S ++ +R++ +
Sbjct: 174 EQKDPDQPKDQESKRDDKDRRRDAERSDKGRERERTKDRDRDKDKSRDREKDKTREKERE 233
Query: 211 KHSRDLTGKDRHADKSGEKSERESKRKHRNRDDEKNRDKSAAKKVD 256
+ K+R DK +K + K R RD ++ R+K K+ D
Sbjct: 234 REKDRNREKERERDKDRDKKKERESHKDRERDKDREREKRREKEKD 279
Score = 66 (28.3 bits), Expect = 4.7e-05, Sum P(3) = 4.7e-05
Identities = 33/146 (22%), Positives = 63/146 (43%)
Query: 725 GQNLTNDETNEKGERL-EEV----TDHKSIKNNELEILNDSKE---VMEAGEVNNVKDNR 776
G+ L+ DE +E G+ + EE +D +++N LE+ D K V + E ++
Sbjct: 433 GKKLSEDEDDEDGQFVVEEAAPPPSDVPEVESNSLELQGDDKHGGLVKKILETKKDYESS 492
Query: 777 PASGTMGDEPSQLCELDTDMAVEYQARDSTSEIVSQGVPTQVNTL----KDSPCAHDDKV 832
P+S + + S + E E AR+ E + + T + K +D
Sbjct: 493 PSSKSKEQDRSLVSEASRKKERELVAREI--ERLRSSIQTVCRSALPLGKIMDYIQEDMD 550
Query: 833 TCNIQLEHMSEENKSSAKEDLNLEEV 858
+ +L+ +ENK +A+ L + +
Sbjct: 551 SMQNELQSWRKENKENAQALLQEQRI 576
Score = 43 (20.2 bits), Expect = 4.7e-05, Sum P(3) = 4.7e-05
Identities = 11/34 (32%), Positives = 14/34 (41%)
Query: 705 SNISTIQACEGNENTASAGVGQNLTNDETNEKGE 738
S I + +G G GQ DET +GE
Sbjct: 329 SRIPRPSSAKGQRRKPKTG-GQGTEQDETESEGE 361
>UNIPROTKB|H3BMM9 [details] [associations]
symbol:RNPS1 "RNA-binding protein with serine-rich domain
1" species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
EMBL:AC009065 HGNC:HGNC:10080 ChiTaRS:RNPS1 Ensembl:ENST00000561518
Bgee:H3BMM9 Uniprot:H3BMM9
Length = 284
Score = 89 (36.4 bits), Expect = 5.8e-05, Sum P(2) = 5.8e-05
Identities = 32/121 (26%), Positives = 48/121 (39%)
Query: 137 KSNHRRTLKSEIRLKDRSPGNEKDRGNRGSD-TKLKADVTKETSSKPNVKSEKLIPSQGR 195
K R KS+ R KD+ E +RG D T+ + + +SS + S
Sbjct: 30 KRKDRSDEKSKDRSKDKGATKESSEKDRGRDKTRKRRSASSGSSSTRSRSSSTSSSGSST 89
Query: 196 SHNQSIVDSRDEATKKHSRDLTGKDRHADKSGEKSERESKRKHRNRDDEKNRDKSAAKKV 255
S S S A+ + T + + S S S+R+H NR ++R KS K
Sbjct: 90 STGSSSGSSSSSASSRSGSSSTSRSS-SSSSSSGSPSPSRRRHDNR--RRSRSKSKPPKR 146
Query: 256 D 256
D
Sbjct: 147 D 147
Score = 84 (34.6 bits), Expect = 5.8e-05, Sum P(2) = 5.8e-05
Identities = 22/78 (28%), Positives = 41/78 (52%)
Query: 553 IFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDH---EEPCAFIEYVDQLVTPKAIAG 609
+ IG ++R ++ +MEI +G +K V H + A++E+ + KA+
Sbjct: 163 VHIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKH 222
Query: 610 LNGLKVGGQVLTAVQAVL 627
++G ++ GQ +TA AVL
Sbjct: 223 MDGGQIDGQEITAT-AVL 239
Score = 79 (32.9 bits), Expect = 0.00067, Sum P(2) = 0.00067
Identities = 31/155 (20%), Positives = 62/155 (40%)
Query: 101 SGKKEDNALTKNVDSSRQRDGENRDLETKLKEDYVAKSNHRRTLKSEIR-LKDRSPGNEK 159
SG K+ + L V + ++ TK K+ KS R K + ++ G +K
Sbjct: 4 SGVKKKSLL--GVKENNKKSSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRDK 61
Query: 160 DRGNRGSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQSIVDSRDEATKKHSRDLTGK 219
R R + + + ++ +S+ + S S G S + + S +T SR +
Sbjct: 62 TRKRRSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSST---SRSSSSS 118
Query: 220 DRHADKSGEKSERESKRKHRNRDDEKNRDKSAAKK 254
S + +++R+ R++ RD+ K+
Sbjct: 119 SSSGSPSPSRRRHDNRRRSRSKSKPPKRDEKERKR 153
>UNIPROTKB|E1BDN8 [details] [associations]
symbol:E1BDN8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] GO:GO:0005739 GO:GO:0005634
GeneTree:ENSGT00700000104035 EMBL:DAAA02050131 EMBL:DAAA02050132
EMBL:DAAA02050133 IPI:IPI00700301 Ensembl:ENSBTAT00000009630
Uniprot:E1BDN8
Length = 519
Score = 131 (51.2 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 44/159 (27%), Positives = 71/159 (44%)
Query: 101 SGKKEDNALTKNVDSSRQRDGENRDLETKLKEDYVAKSNHRRTLKSEIRLKDRSPGNEKD 160
SGK + + + N+ R R NR ++ K+ +KS H++ KS R K RS +D
Sbjct: 317 SGKSKGDQ-SNNLSFFRSRS-HNRS-RSRQKDRRRSKSPHKKRSKSRERRKSRSRSRSRD 373
Query: 161 RGNRGSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQSIVDSRDEATKKHSRDLTGKD 220
+ DT+ K + K K + + R + R + K RD K+
Sbjct: 374 KRK---DTREKIKEKERVKEKDREKERE--KERDREKEREKEKERGK-NKDKDRD---KE 424
Query: 221 RHADKSGEKSERESKRKHRNRDDEKNRDKSAAKKVDLGK 259
R D+ +K + + K + R++D EK RDK K+ D K
Sbjct: 425 REKDRDKDKDKEKDKERERDKDHEKERDKEKEKEQDKEK 463
>UNIPROTKB|Q08170 [details] [associations]
symbol:SRSF4 "Serine/arginine-rich splicing factor 4"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0016607
"nuclear speck" evidence=IEA] [GO:0048025 "negative regulation of
mRNA splicing, via spliceosome" evidence=IDA] [GO:0005634 "nucleus"
evidence=TAS] [GO:0006397 "mRNA processing" evidence=TAS]
[GO:0000375 "RNA splicing, via transesterification reactions"
evidence=TAS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0006369 "termination of RNA polymerase II transcription"
evidence=TAS] [GO:0006406 "mRNA export from nucleus" evidence=TAS]
[GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0031124 "mRNA 3'-end processing"
evidence=TAS] Reactome:REACT_71 InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0005654 GO:GO:0000166 EMBL:AL357500 GO:GO:0016607
Reactome:REACT_1675 Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0006406
GO:GO:0000398 Reactome:REACT_1788 GO:GO:0048025 eggNOG:COG0724
GO:GO:0006369 GO:GO:0031124 Reactome:REACT_78 HOVERGEN:HBG002295
EMBL:AL590729 KO:K12893 EMBL:L14076 EMBL:BT007415 EMBL:BC002781
EMBL:AC004236 IPI:IPI00000015 PIR:A48133 RefSeq:NP_005617.2
UniGene:Hs.469970 ProteinModelPortal:Q08170 SMR:Q08170
IntAct:Q08170 MINT:MINT-1410521 STRING:Q08170 PhosphoSite:Q08170
DMDM:20981726 PaxDb:Q08170 PeptideAtlas:Q08170 PRIDE:Q08170
DNASU:6429 Ensembl:ENST00000373795 GeneID:6429 KEGG:hsa:6429
UCSC:uc001bro.3 CTD:6429 GeneCards:GC01M029474 H-InvDB:HIX0160019
HGNC:HGNC:10786 HPA:HPA050975 MIM:601940 neXtProt:NX_Q08170
PharmGKB:PA35702 InParanoid:Q08170 OMA:REHAKSE OrthoDB:EOG41C6X9
PhylomeDB:Q08170 ChiTaRS:SRSF4 GenomeRNAi:6429 NextBio:24969
ArrayExpress:Q08170 Bgee:Q08170 CleanEx:HS_SFRS4
Genevestigator:Q08170 GermOnline:ENSG00000116350 Uniprot:Q08170
Length = 494
Score = 123 (48.4 bits), Expect = 0.00046, P = 0.00046
Identities = 48/164 (29%), Positives = 77/164 (46%)
Query: 94 EEYVKVGSGKKEDNALTKNVDSSRQRDGENRDLETKLKEDYVAKSNHRRTLKSEIRLKDR 153
E+ V G+ ++ +L ++ SR + G ++ K K R +S R + R
Sbjct: 312 EKRGSVSRGRSQEKSLRQSRSRSRSKGGSRSRSRSRSKSKDKRKGRKRSREESRSRSRSR 371
Query: 154 SPGNEKDRGNRGSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQSIVDSRDEATKKHS 213
S +E+ R RGS K D +K SSK K E SQ RS ++S+ R+ A + S
Sbjct: 372 SK-SERSR-KRGS----KRD-SKAGSSKKK-KKEDTDRSQSRSPSRSVSKEREHAKSESS 423
Query: 214 -RDLTGKDRHADKSGE---KSERESKRKHRNRDDEKNRDKSAAK 253
R+ G+ +A + E +S SK K + ++R KSA+K
Sbjct: 424 QREGRGESENAGTNQETRSRSRSNSKSKPNLPSESRSRSKSASK 467
Score = 114 (45.2 bits), Expect = 6.8e-05, Sum P(2) = 6.8e-05
Identities = 43/157 (27%), Positives = 74/157 (47%)
Query: 116 SRQRDGENRDLETKLKEDYVA------KSNHRRTLKSEIRL-KDRSPGNEKDRG---NRG 165
SR R G ++ +K + + KS R +S + K RSP EK R + G
Sbjct: 204 SRSRSGSSKSSHSKSRSRSRSGSRSRSKSRSRSQSRSRSKKEKSRSPSKEKSRSRSHSAG 263
Query: 166 -SDTKLKADVTKETSSKPNV-KSEKLIPSQGRSHNQSIVDSRDEATKKHSRDLTGKDRHA 223
S +K K ++ + NV K + PS+ +S ++S S++ ++ R + R
Sbjct: 264 KSRSKSKDQAEEKIQNNDNVGKPKSRSPSRHKSKSKSRSRSQERRVEEEKRGSVSRGR-- 321
Query: 224 DKSGEKSERESKRKHRNRDDEKNRDKSAAKKVDLGKG 260
S EKS R+S+ + R++ ++R +S +K D KG
Sbjct: 322 --SQEKSLRQSRSRSRSKGGSRSRSRSRSKSKDKRKG 356
Score = 109 (43.4 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 46/168 (27%), Positives = 77/168 (45%)
Query: 98 KVGSGKKEDNALTKNVDSSRQRDGENRDLETKLKEDYVAKSNHRRTLKSEIRLKDRSPGN 157
K GS ++ + +++ SR R +R ++ +KS+H ++ +S R RS
Sbjct: 176 KPGSRRRRSYSRSRSHSRSRSRSRHSRKSRSRSGS---SKSSHSKS-RSRSRSGSRSRSK 231
Query: 158 EKDRGNRGSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHN--QSIVDSRDEATKK-HSR 214
+ R S +K KE S P+ EK S+ RSH+ +S S+D+A +K +
Sbjct: 232 SRSRSQSRSRSK------KEKSRSPS--KEK---SRSRSHSAGKSRSKSKDQAEEKIQNN 280
Query: 215 DLTGKDRHADKSGEKSERESKRKHRNRDDEKNRDKSAAKKVDLGKGHD 262
D GK KS S +SK K R+R E+ ++ V G+ +
Sbjct: 281 DNVGKP----KSRSPSRHKSKSKSRSRSQERRVEEEKRGSVSRGRSQE 324
Score = 64 (27.6 bits), Expect = 6.8e-05, Sum P(2) = 6.8e-05
Identities = 39/161 (24%), Positives = 59/161 (36%)
Query: 307 RAQKRTSYYDREHEGLPSHSTKISSGRQHSDIDS-SRVTGNGLSGHYRRHDGSTSGLGGY 365
R++ R+ R S S GR+ S +S SR S R+ G
Sbjct: 331 RSRSRSKGGSRSRSRSRSKSKDKRKGRKRSREESRSRSRSRSKSERSRKRGSKRDSKAGS 390
Query: 366 SPRKRRTEA-AAKTPSPINR-SPEKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVS 423
S +K++ + +++ SP S E++ AK + + E N T NQ S +
Sbjct: 391 SKKKKKEDTDRSQSRSPSRSVSKEREHAKSESSQREGRGESENAGT-NQETRSRSRSNSK 449
Query: 424 SDPVTSTTQKPLAGISVSASLAKLNVSMDSVQLTQSNRPMR 464
S P P S S S +K S + S P R
Sbjct: 450 SKP-----NLPSESRSRSKSASKTRSRSKSRSRSASRSPSR 485
>UNIPROTKB|H3BTC0 [details] [associations]
symbol:RNPS1 "RNA-binding protein with serine-rich domain
1" species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
EMBL:AC009065 HGNC:HGNC:10080 ChiTaRS:RNPS1 Ensembl:ENST00000565870
Bgee:H3BTC0 Uniprot:H3BTC0
Length = 302
Score = 89 (36.4 bits), Expect = 7.2e-05, Sum P(2) = 7.2e-05
Identities = 32/121 (26%), Positives = 48/121 (39%)
Query: 137 KSNHRRTLKSEIRLKDRSPGNEKDRGNRGSD-TKLKADVTKETSSKPNVKSEKLIPSQGR 195
K R KS+ R KD+ E +RG D T+ + + +SS + S
Sbjct: 30 KRKDRSDEKSKDRSKDKGATKESSEKDRGRDKTRKRRSASSGSSSTRSRSSSTSSSGSST 89
Query: 196 SHNQSIVDSRDEATKKHSRDLTGKDRHADKSGEKSERESKRKHRNRDDEKNRDKSAAKKV 255
S S S A+ + T + + S S S+R+H NR ++R KS K
Sbjct: 90 STGSSSGSSSSSASSRSGSSSTSRSS-SSSSSSGSPSPSRRRHDNR--RRSRSKSKPPKR 146
Query: 256 D 256
D
Sbjct: 147 D 147
Score = 84 (34.6 bits), Expect = 7.2e-05, Sum P(2) = 7.2e-05
Identities = 22/78 (28%), Positives = 41/78 (52%)
Query: 553 IFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDH---EEPCAFIEYVDQLVTPKAIAG 609
+ IG ++R ++ +MEI +G +K V H + A++E+ + KA+
Sbjct: 163 VHIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKH 222
Query: 610 LNGLKVGGQVLTAVQAVL 627
++G ++ GQ +TA AVL
Sbjct: 223 MDGGQIDGQEITAT-AVL 239
Score = 79 (32.9 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 31/155 (20%), Positives = 62/155 (40%)
Query: 101 SGKKEDNALTKNVDSSRQRDGENRDLETKLKEDYVAKSNHRRTLKSEIR-LKDRSPGNEK 159
SG K+ + L V + ++ TK K+ KS R K + ++ G +K
Sbjct: 4 SGVKKKSLL--GVKENNKKSSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRDK 61
Query: 160 DRGNRGSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQSIVDSRDEATKKHSRDLTGK 219
R R + + + ++ +S+ + S S G S + + S +T SR +
Sbjct: 62 TRKRRSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSST---SRSSSSS 118
Query: 220 DRHADKSGEKSERESKRKHRNRDDEKNRDKSAAKK 254
S + +++R+ R++ RD+ K+
Sbjct: 119 SSSGSPSPSRRRHDNRRRSRSKSKPPKRDEKERKR 153
>UNIPROTKB|A6QR16 [details] [associations]
symbol:RNPS1 "RNA-binding protein with serine-rich domain
1" species:9913 "Bos taurus" [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008380
"RNA splicing" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005737 GO:GO:0000184 GO:GO:0008380
GO:GO:0000166 GO:GO:0016607 GO:GO:0006397 Gene3D:3.30.70.330
GO:GO:0003730 GeneTree:ENSGT00700000104336 EMBL:BC150075
IPI:IPI00867269 RefSeq:NP_001095311.1 UniGene:Bt.20502
ProteinModelPortal:A6QR16 STRING:A6QR16 Ensembl:ENSBTAT00000013151
GeneID:504506 KEGG:bta:504506 CTD:10921 eggNOG:NOG331533
HOGENOM:HOG000044325 InParanoid:A6QR16 KO:K14325 OMA:TKRKDRT
OrthoDB:EOG44J2KM NextBio:20866696 Uniprot:A6QR16
Length = 305
Score = 89 (36.4 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 32/121 (26%), Positives = 48/121 (39%)
Query: 137 KSNHRRTLKSEIRLKDRSPGNEKDRGNRGSD-TKLKADVTKETSSKPNVKSEKLIPSQGR 195
K R KS+ R KD+ E +RG D T+ + + +SS + S
Sbjct: 30 KRKDRSDEKSKDRSKDKGATKESSEKDRGRDKTRKRRSASSGSSSTRSRSSSTSSSGSST 89
Query: 196 SHNQSIVDSRDEATKKHSRDLTGKDRHADKSGEKSERESKRKHRNRDDEKNRDKSAAKKV 255
S S S A+ + T + + S S S+R+H NR ++R KS K
Sbjct: 90 STGSSSGSSSSSASSRSGSSSTSRSS-SSSSSSGSPSPSRRRHDNR--RRSRSKSKPPKR 146
Query: 256 D 256
D
Sbjct: 147 D 147
Score = 84 (34.6 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 22/78 (28%), Positives = 41/78 (52%)
Query: 553 IFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDH---EEPCAFIEYVDQLVTPKAIAG 609
+ IG ++R ++ +MEI +G +K V H + A++E+ + KA+
Sbjct: 163 VHIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKH 222
Query: 610 LNGLKVGGQVLTAVQAVL 627
++G ++ GQ +TA AVL
Sbjct: 223 MDGGQIDGQEITAT-AVL 239
Score = 79 (32.9 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 31/155 (20%), Positives = 62/155 (40%)
Query: 101 SGKKEDNALTKNVDSSRQRDGENRDLETKLKEDYVAKSNHRRTLKSEIR-LKDRSPGNEK 159
SG K+ + L V + ++ TK K+ KS R K + ++ G +K
Sbjct: 4 SGVKKKSLL--GVKENNKKSSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRDK 61
Query: 160 DRGNRGSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQSIVDSRDEATKKHSRDLTGK 219
R R + + + ++ +S+ + S S G S + + S +T SR +
Sbjct: 62 TRKRRSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSST---SRSSSSS 118
Query: 220 DRHADKSGEKSERESKRKHRNRDDEKNRDKSAAKK 254
S + +++R+ R++ RD+ K+
Sbjct: 119 SSSGSPSPSRRRHDNRRRSRSKSKPPKRDEKERKR 153
>UNIPROTKB|F6XEW2 [details] [associations]
symbol:RNPS1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00700000104336 CTD:10921 KO:K14325 OMA:TKRKDRT
Ensembl:ENSCAFT00000030839 EMBL:AAEX03004619 RefSeq:XP_537005.1
ProteinModelPortal:F6XEW2 GeneID:479880 KEGG:cfa:479880
Uniprot:F6XEW2
Length = 305
Score = 89 (36.4 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 32/121 (26%), Positives = 48/121 (39%)
Query: 137 KSNHRRTLKSEIRLKDRSPGNEKDRGNRGSD-TKLKADVTKETSSKPNVKSEKLIPSQGR 195
K R KS+ R KD+ E +RG D T+ + + +SS + S
Sbjct: 30 KRKDRSDEKSKDRSKDKGATKESSEKDRGRDKTRKRRSASSGSSSTRSRSSSTSSSGSST 89
Query: 196 SHNQSIVDSRDEATKKHSRDLTGKDRHADKSGEKSERESKRKHRNRDDEKNRDKSAAKKV 255
S S S A+ + T + + S S S+R+H NR ++R KS K
Sbjct: 90 STGSSSGSSSSSASSRSGSSSTSRSS-SSSSSSGSPSPSRRRHDNR--RRSRSKSKPPKR 146
Query: 256 D 256
D
Sbjct: 147 D 147
Score = 84 (34.6 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 22/78 (28%), Positives = 41/78 (52%)
Query: 553 IFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDH---EEPCAFIEYVDQLVTPKAIAG 609
+ IG ++R ++ +MEI +G +K V H + A++E+ + KA+
Sbjct: 163 VHIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKH 222
Query: 610 LNGLKVGGQVLTAVQAVL 627
++G ++ GQ +TA AVL
Sbjct: 223 MDGGQIDGQEITAT-AVL 239
Score = 79 (32.9 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 31/155 (20%), Positives = 62/155 (40%)
Query: 101 SGKKEDNALTKNVDSSRQRDGENRDLETKLKEDYVAKSNHRRTLKSEIR-LKDRSPGNEK 159
SG K+ + L V + ++ TK K+ KS R K + ++ G +K
Sbjct: 4 SGVKKKSLL--GVKENNKKSSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRDK 61
Query: 160 DRGNRGSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQSIVDSRDEATKKHSRDLTGK 219
R R + + + ++ +S+ + S S G S + + S +T SR +
Sbjct: 62 TRKRRSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSST---SRSSSSS 118
Query: 220 DRHADKSGEKSERESKRKHRNRDDEKNRDKSAAKK 254
S + +++R+ R++ RD+ K+
Sbjct: 119 SSSGSPSPSRRRHDNRRRSRSKSKPPKRDEKERKR 153
>UNIPROTKB|Q15287 [details] [associations]
symbol:RNPS1 "RNA-binding protein with serine-rich domain
1" species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA] [GO:0035145
"exon-exon junction complex" evidence=TAS] [GO:0003730 "mRNA 3'-UTR
binding" evidence=IDA] [GO:0000184 "nuclear-transcribed mRNA
catabolic process, nonsense-mediated decay" evidence=IMP;IDA;TAS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=TAS] [GO:0003723 "RNA binding" evidence=TAS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=TAS] [GO:0006406 "mRNA export from nucleus"
evidence=TAS] [GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031124 "mRNA 3'-end processing" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] Reactome:REACT_71
Reactome:REACT_21257 InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005829
GO:GO:0005654 GO:GO:0000184 GO:GO:0000166 GO:GO:0016607
Reactome:REACT_1675 Gene3D:3.30.70.330 EMBL:CH471112
TCDB:3.A.18.1.1 GO:GO:0003730 GO:GO:0006406 GO:GO:0000398
Reactome:REACT_1788 EMBL:AC009065 GO:GO:0006369 GO:GO:0031124
Reactome:REACT_78 CTD:10921 eggNOG:NOG331533 KO:K14325 OMA:TKRKDRT
OrthoDB:EOG44J2KM EMBL:L37368 EMBL:AF015608 EMBL:AF274003
EMBL:AK289955 EMBL:AK293343 EMBL:AK303100 EMBL:AK316132
EMBL:BC001659 EMBL:BC001838 EMBL:BC108316 EMBL:AF247662
IPI:IPI00033561 IPI:IPI00479871 IPI:IPI00783594 PIR:JC4525
RefSeq:NP_006702.1 RefSeq:NP_542161.1 UniGene:Hs.355643
UniGene:Hs.507343 UniGene:Hs.733012 PDB:4A8X PDBsum:4A8X
ProteinModelPortal:Q15287 SMR:Q15287 DIP:DIP-32943N IntAct:Q15287
MINT:MINT-1474621 STRING:Q15287 PhosphoSite:Q15287 DMDM:74754492
PaxDb:Q15287 PRIDE:Q15287 DNASU:10921 Ensembl:ENST00000301730
Ensembl:ENST00000320225 Ensembl:ENST00000397086
Ensembl:ENST00000565678 Ensembl:ENST00000566458
Ensembl:ENST00000568631 GeneID:10921 KEGG:hsa:10921 UCSC:uc002cpt.3
UCSC:uc002cpx.3 GeneCards:GC16M002303 H-InvDB:HIX0031789
HGNC:HGNC:10080 HPA:HPA044014 MIM:606447 neXtProt:NX_Q15287
PharmGKB:PA34453 HOVERGEN:HBG053138 InParanoid:Q15287 ChiTaRS:RNPS1
GenomeRNAi:10921 NextBio:41487 ArrayExpress:Q15287 Bgee:Q15287
CleanEx:HS_RNPS1 Genevestigator:Q15287 GermOnline:ENSG00000205937
Uniprot:Q15287
Length = 305
Score = 89 (36.4 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 32/121 (26%), Positives = 48/121 (39%)
Query: 137 KSNHRRTLKSEIRLKDRSPGNEKDRGNRGSD-TKLKADVTKETSSKPNVKSEKLIPSQGR 195
K R KS+ R KD+ E +RG D T+ + + +SS + S
Sbjct: 30 KRKDRSDEKSKDRSKDKGATKESSEKDRGRDKTRKRRSASSGSSSTRSRSSSTSSSGSST 89
Query: 196 SHNQSIVDSRDEATKKHSRDLTGKDRHADKSGEKSERESKRKHRNRDDEKNRDKSAAKKV 255
S S S A+ + T + + S S S+R+H NR ++R KS K
Sbjct: 90 STGSSSGSSSSSASSRSGSSSTSRSS-SSSSSSGSPSPSRRRHDNR--RRSRSKSKPPKR 146
Query: 256 D 256
D
Sbjct: 147 D 147
Score = 84 (34.6 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 22/78 (28%), Positives = 41/78 (52%)
Query: 553 IFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDH---EEPCAFIEYVDQLVTPKAIAG 609
+ IG ++R ++ +MEI +G +K V H + A++E+ + KA+
Sbjct: 163 VHIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKH 222
Query: 610 LNGLKVGGQVLTAVQAVL 627
++G ++ GQ +TA AVL
Sbjct: 223 MDGGQIDGQEITAT-AVL 239
Score = 79 (32.9 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 31/155 (20%), Positives = 62/155 (40%)
Query: 101 SGKKEDNALTKNVDSSRQRDGENRDLETKLKEDYVAKSNHRRTLKSEIR-LKDRSPGNEK 159
SG K+ + L V + ++ TK K+ KS R K + ++ G +K
Sbjct: 4 SGVKKKSLL--GVKENNKKSSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRDK 61
Query: 160 DRGNRGSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQSIVDSRDEATKKHSRDLTGK 219
R R + + + ++ +S+ + S S G S + + S +T SR +
Sbjct: 62 TRKRRSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSST---SRSSSSS 118
Query: 220 DRHADKSGEKSERESKRKHRNRDDEKNRDKSAAKK 254
S + +++R+ R++ RD+ K+
Sbjct: 119 SSSGSPSPSRRRHDNRRRSRSKSKPPKRDEKERKR 153
>MGI|MGI:97960 [details] [associations]
symbol:Rnps1 "ribonucleic acid binding protein S1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA catabolic
process, nonsense-mediated decay" evidence=ISO] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0003730
"mRNA 3'-UTR binding" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 MGI:MGI:97960 GO:GO:0005737
GO:GO:0000184 GO:GO:0008380 GO:GO:0000166 GO:GO:0016607
GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723
GeneTree:ENSGT00700000104336 CTD:10921 eggNOG:NOG331533
HOGENOM:HOG000044325 KO:K14325 OMA:TKRKDRT OrthoDB:EOG44J2KM
HOVERGEN:HBG053138 ChiTaRS:RNPS1 EMBL:AK146443 EMBL:AK151150
EMBL:AK165905 EMBL:BC002061 EMBL:BC008089 IPI:IPI00462424
IPI:IPI00656166 RefSeq:NP_001073596.1 RefSeq:NP_001073597.1
RefSeq:NP_033096.2 UniGene:Mm.1951 ProteinModelPortal:Q99M28
SMR:Q99M28 STRING:Q99M28 PhosphoSite:Q99M28 PaxDb:Q99M28
PRIDE:Q99M28 Ensembl:ENSMUST00000088512 Ensembl:ENSMUST00000115371
Ensembl:ENSMUST00000163717 GeneID:19826 KEGG:mmu:19826
UCSC:uc008avs.1 UCSC:uc008avu.1 NextBio:297301 Bgee:Q99M28
CleanEx:MM_RNPS1 Genevestigator:Q99M28
GermOnline:ENSMUSG00000034681 Uniprot:Q99M28
Length = 305
Score = 89 (36.4 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 32/121 (26%), Positives = 48/121 (39%)
Query: 137 KSNHRRTLKSEIRLKDRSPGNEKDRGNRGSD-TKLKADVTKETSSKPNVKSEKLIPSQGR 195
K R KS+ R KD+ E +RG D T+ + + +SS + S
Sbjct: 30 KRKDRSDEKSKDRSKDKGATKESSEKDRGRDKTRKRRSASSGSSSTRSRSSSTSSSGSST 89
Query: 196 SHNQSIVDSRDEATKKHSRDLTGKDRHADKSGEKSERESKRKHRNRDDEKNRDKSAAKKV 255
S S S A+ + T + + S S S+R+H NR ++R KS K
Sbjct: 90 STGSSSGSSSSSASSRSGSSSTSRSS-SSSSSSGSPSPSRRRHDNR--RRSRSKSKPPKR 146
Query: 256 D 256
D
Sbjct: 147 D 147
Score = 84 (34.6 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 22/78 (28%), Positives = 41/78 (52%)
Query: 553 IFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDH---EEPCAFIEYVDQLVTPKAIAG 609
+ IG ++R ++ +MEI +G +K V H + A++E+ + KA+
Sbjct: 163 VHIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKH 222
Query: 610 LNGLKVGGQVLTAVQAVL 627
++G ++ GQ +TA AVL
Sbjct: 223 MDGGQIDGQEITAT-AVL 239
Score = 79 (32.9 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 31/155 (20%), Positives = 62/155 (40%)
Query: 101 SGKKEDNALTKNVDSSRQRDGENRDLETKLKEDYVAKSNHRRTLKSEIR-LKDRSPGNEK 159
SG K+ + L V + ++ TK K+ KS R K + ++ G +K
Sbjct: 4 SGVKKKSLL--GVKENNKKSSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRDK 61
Query: 160 DRGNRGSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQSIVDSRDEATKKHSRDLTGK 219
R R + + + ++ +S+ + S S G S + + S +T SR +
Sbjct: 62 TRKRRSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSST---SRSSSSS 118
Query: 220 DRHADKSGEKSERESKRKHRNRDDEKNRDKSAAKK 254
S + +++R+ R++ RD+ K+
Sbjct: 119 SSSGSPSPSRRRHDNRRRSRSKSKPPKRDEKERKR 153
>RGD|1307522 [details] [associations]
symbol:Rnps1 "ribonucleic acid binding protein S1" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA;ISO] [GO:0003674
"molecular_function" evidence=ND] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003730 "mRNA 3'-UTR binding" evidence=ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0016607
"nuclear speck" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 RGD:1307522
GO:GO:0005737 GO:GO:0000184 GO:GO:0008380 GO:GO:0000166
GO:GO:0016607 GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723
GeneTree:ENSGT00700000104336 CTD:10921 eggNOG:NOG331533
HOGENOM:HOG000044325 KO:K14325 OrthoDB:EOG44J2KM HOVERGEN:HBG053138
EMBL:BC079014 IPI:IPI00464732 RefSeq:NP_001011890.1 UniGene:Rn.7235
ProteinModelPortal:Q6AYK1 STRING:Q6AYK1 Ensembl:ENSRNOT00000010915
GeneID:287113 KEGG:rno:287113 UCSC:RGD:1307522 NextBio:625524
ArrayExpress:Q6AYK1 Genevestigator:Q6AYK1
GermOnline:ENSRNOG00000008703 Uniprot:Q6AYK1
Length = 305
Score = 89 (36.4 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 32/121 (26%), Positives = 48/121 (39%)
Query: 137 KSNHRRTLKSEIRLKDRSPGNEKDRGNRGSD-TKLKADVTKETSSKPNVKSEKLIPSQGR 195
K R KS+ R KD+ E +RG D T+ + + +SS + S
Sbjct: 30 KRKDRSDEKSKDRSKDKGTTKESSEKDRGRDKTRKRRSASSGSSSTRSRSSSTSSSGSST 89
Query: 196 SHNQSIVDSRDEATKKHSRDLTGKDRHADKSGEKSERESKRKHRNRDDEKNRDKSAAKKV 255
S S S A+ + T + + S S S+R+H NR ++R KS K
Sbjct: 90 STGSSSGSSSSSASSRSGSSSTSRSS-SSSSSSGSPSPSRRRHDNR--RRSRSKSKPPKR 146
Query: 256 D 256
D
Sbjct: 147 D 147
Score = 84 (34.6 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 22/78 (28%), Positives = 41/78 (52%)
Query: 553 IFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDH---EEPCAFIEYVDQLVTPKAIAG 609
+ IG ++R ++ +MEI +G +K V H + A++E+ + KA+
Sbjct: 163 VHIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKH 222
Query: 610 LNGLKVGGQVLTAVQAVL 627
++G ++ GQ +TA AVL
Sbjct: 223 MDGGQIDGQEITAT-AVL 239
Score = 79 (32.9 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 31/155 (20%), Positives = 62/155 (40%)
Query: 101 SGKKEDNALTKNVDSSRQRDGENRDLETKLKEDYVAKSNHRRTLKSEIR-LKDRSPGNEK 159
SG K+ + L V + ++ TK K+ KS R K + ++ G +K
Sbjct: 4 SGVKKKSLL--GVKENNKKSSTRAPSPTKRKDRSDEKSKDRSKDKGTTKESSEKDRGRDK 61
Query: 160 DRGNRGSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQSIVDSRDEATKKHSRDLTGK 219
R R + + + ++ +S+ + S S G S + + S +T SR +
Sbjct: 62 TRKRRSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSST---SRSSSSS 118
Query: 220 DRHADKSGEKSERESKRKHRNRDDEKNRDKSAAKK 254
S + +++R+ R++ RD+ K+
Sbjct: 119 SSSGSPSPSRRRHDNRRRSRSKSKPPKRDEKERKR 153
>UNIPROTKB|Q6AYK1 [details] [associations]
symbol:Rnps1 "RNA-binding protein with serine-rich domain
1" species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 RGD:1307522
GO:GO:0005737 GO:GO:0000184 GO:GO:0008380 GO:GO:0000166
GO:GO:0016607 GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723
GeneTree:ENSGT00700000104336 CTD:10921 eggNOG:NOG331533
HOGENOM:HOG000044325 KO:K14325 OrthoDB:EOG44J2KM HOVERGEN:HBG053138
EMBL:BC079014 IPI:IPI00464732 RefSeq:NP_001011890.1 UniGene:Rn.7235
ProteinModelPortal:Q6AYK1 STRING:Q6AYK1 Ensembl:ENSRNOT00000010915
GeneID:287113 KEGG:rno:287113 UCSC:RGD:1307522 NextBio:625524
ArrayExpress:Q6AYK1 Genevestigator:Q6AYK1
GermOnline:ENSRNOG00000008703 Uniprot:Q6AYK1
Length = 305
Score = 89 (36.4 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 32/121 (26%), Positives = 48/121 (39%)
Query: 137 KSNHRRTLKSEIRLKDRSPGNEKDRGNRGSD-TKLKADVTKETSSKPNVKSEKLIPSQGR 195
K R KS+ R KD+ E +RG D T+ + + +SS + S
Sbjct: 30 KRKDRSDEKSKDRSKDKGTTKESSEKDRGRDKTRKRRSASSGSSSTRSRSSSTSSSGSST 89
Query: 196 SHNQSIVDSRDEATKKHSRDLTGKDRHADKSGEKSERESKRKHRNRDDEKNRDKSAAKKV 255
S S S A+ + T + + S S S+R+H NR ++R KS K
Sbjct: 90 STGSSSGSSSSSASSRSGSSSTSRSS-SSSSSSGSPSPSRRRHDNR--RRSRSKSKPPKR 146
Query: 256 D 256
D
Sbjct: 147 D 147
Score = 84 (34.6 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 22/78 (28%), Positives = 41/78 (52%)
Query: 553 IFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDH---EEPCAFIEYVDQLVTPKAIAG 609
+ IG ++R ++ +MEI +G +K V H + A++E+ + KA+
Sbjct: 163 VHIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKH 222
Query: 610 LNGLKVGGQVLTAVQAVL 627
++G ++ GQ +TA AVL
Sbjct: 223 MDGGQIDGQEITAT-AVL 239
Score = 79 (32.9 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 31/155 (20%), Positives = 62/155 (40%)
Query: 101 SGKKEDNALTKNVDSSRQRDGENRDLETKLKEDYVAKSNHRRTLKSEIR-LKDRSPGNEK 159
SG K+ + L V + ++ TK K+ KS R K + ++ G +K
Sbjct: 4 SGVKKKSLL--GVKENNKKSSTRAPSPTKRKDRSDEKSKDRSKDKGTTKESSEKDRGRDK 61
Query: 160 DRGNRGSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQSIVDSRDEATKKHSRDLTGK 219
R R + + + ++ +S+ + S S G S + + S +T SR +
Sbjct: 62 TRKRRSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSST---SRSSSSS 118
Query: 220 DRHADKSGEKSERESKRKHRNRDDEKNRDKSAAKK 254
S + +++R+ R++ RD+ K+
Sbjct: 119 SSSGSPSPSRRRHDNRRRSRSKSKPPKRDEKERKR 153
>ZFIN|ZDB-GENE-070912-117 [details] [associations]
symbol:arhgap30 "Rho GTPase activating protein 30"
species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
InterPro:IPR000198 InterPro:IPR008936 Pfam:PF00620 PROSITE:PS50238
ZFIN:ZDB-GENE-070912-117 GO:GO:0007165 Gene3D:1.10.555.10
SUPFAM:SSF48350 GO:GO:0005622 GeneTree:ENSGT00550000074777
EMBL:CR774186 IPI:IPI00972507 Ensembl:ENSDART00000109648
Bgee:E7FDZ9 Uniprot:E7FDZ9
Length = 1284
Score = 97 (39.2 bits), Expect = 9.1e-05, Sum P(2) = 9.1e-05
Identities = 48/212 (22%), Positives = 90/212 (42%)
Query: 705 SNISTIQACEGNENTASAGVGQNLTNDETNEKGERLEEVTDHKSIKNNELEILNDSKEVM 764
S +S +Q N V + N+E NEK E+ +E +I N + + ++ E+
Sbjct: 864 SQMSEVQDLWQNNEQIQENVTDSEQNEEENEKEEQKQETEMQDNIGENTEDEMKET-ELQ 922
Query: 765 EAGEVNNVKDNRPASGT------MGDEPSQLCELDT------DMAVEYQARDSTSEIVSQ 812
E E NN + R + +L E + + + + D+ +E Q
Sbjct: 923 EI-EQNNAETEREEQNQEIQWQDIEQNNEELAENEKKEQKQENKMQDLEQNDAENEGEEQ 981
Query: 813 GVPTQVNTLKDSPCAHDDKVT---CNIQ-LEHMSEEN-KSSAKEDLNLEEVNGNSEAFTG 867
T++ L+ + ++ K +Q LE + EN K K++ ++++ N+ G
Sbjct: 982 NQETKMQDLEQNNAENEGKEQNQETKMQDLEQNNAENEKKEQKQENKMQDIEQNNAENEG 1041
Query: 868 ASN--EMGMQSSAVENGDNE-NQDPNQGHIFE 896
E MQ S +N +NE N++ NQ ++ E
Sbjct: 1042 EKQKQETKMQDSNEDNPENEKNKERNQENVTE 1073
Score = 91 (37.1 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 49/201 (24%), Positives = 84/201 (41%)
Query: 706 NISTIQACEGNEN--TASAGVGQNLTNDET-NEKGERLEEVTDHKSIKNNEL--EILNDS 760
N+ CE E T + QN N+E EK ++ EV D +NNE E + DS
Sbjct: 831 NVEENAKCEKEETQVTQMNDIEQN--NEENAEEKQSQMSEVQD--LWQNNEQIQENVTDS 886
Query: 761 KEVMEAGEVNNVKDNRPASGTMG----DE--PSQLCELDTDMAVEYQARDSTSEIVSQGV 814
++ E E K +G DE ++L E++ + A E + + EI Q +
Sbjct: 887 EQNEEENEKEEQKQETEMQDNIGENTEDEMKETELQEIEQNNA-ETEREEQNQEIQWQDI 945
Query: 815 PTQVNTLKDSPCAHDDKVTCNIQ-LEHMSEENKSSAK-EDLNLEEVNGNSEAFTGA--SN 870
L ++ + K +Q LE EN+ + ++ ++++ N+ G +
Sbjct: 946 EQNNEELAENE-KKEQKQENKMQDLEQNDAENEGEEQNQETKMQDLEQNNAENEGKEQNQ 1004
Query: 871 EMGMQSSAVENGDNENQDPNQ 891
E MQ N +NE ++ Q
Sbjct: 1005 ETKMQDLEQNNAENEKKEQKQ 1025
Score = 90 (36.7 bits), Expect = 9.1e-05, Sum P(2) = 9.1e-05
Identities = 30/157 (19%), Positives = 75/157 (47%)
Query: 101 SGKKEDNALTKNVDSSRQRDGENR-DLETKLKEDYVAKSNHRRTLKSEIRLKDRSPGNEK 159
S + E N ++ + D +R E + ++T+ + D +S+ + TL+ + ++++ NE
Sbjct: 635 SPEPEKNHISVHEDINRNSASEEQTQIKTQRETDE-PESSVKTTLQDDEE-QNKTENNED 692
Query: 160 -DRGNRGSDTKLKADVTKETSS--KPNVKSEKLIPSQGRSHNQSIVDSRDEATKKHSRDL 216
+ + ++T+ + D+ ++ K K EK S+ N +E +KH ++
Sbjct: 693 LESAHDQNNTERQEDLEEDAKDDDKGEQKQEKTAQSEDLQQNNEENAEDEEREEKHEAEM 752
Query: 217 TGKDRHADKSGEKSERESKRKHRNRDDEKNRDKSAAK 253
+++ + + + E+ K D E+N +++A +
Sbjct: 753 NDVEQNNEGNADDEEKRLKDMSEINDTEQNNEENAGE 789
Score = 88 (36.0 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 31/157 (19%), Positives = 73/157 (46%)
Query: 100 GSGKKEDNALTKNVDSSRQRDGENRDLETKLKEDY--VAKSNHRRTLKSEIRLKDRSPGN 157
G K+E A ++++ + + + E+ + E K + + V ++N E RLKD S N
Sbjct: 718 GEQKQEKTAQSEDLQQNNEENAEDEEREEKHEAEMNDVEQNNEGNADDEEKRLKDMSEIN 777
Query: 158 EKDRGNRGSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQSIVDSRDEATKKHSRDLT 217
+ ++ N + ++ K+ + N+ Q + NQ V + + ++ ++
Sbjct: 778 DTEQNNEEN----AGEIQKQMTDMDNL-------GQNKEGNQENVMEINNIEQNNALEMQ 826
Query: 218 GKDRHADKSGEKSERESKRKHRNRDDEKNRDKSAAKK 254
+ +++ K E+E + + D E+N +++A +K
Sbjct: 827 NLKLNVEENA-KCEKEETQVTQMNDIEQNNEENAEEK 862
>UNIPROTKB|Q8WXA9 [details] [associations]
symbol:SREK1 "Splicing regulatory glutamine/lysine-rich
protein 1" species:9606 "Homo sapiens" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IDA] InterPro:IPR000504 InterPro:IPR012677
PROSITE:PS50102 SMART:SM00360 GO:GO:0005739 GO:GO:0005634
GO:GO:0008380 GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330
GO:GO:0005681 GO:GO:0003676 eggNOG:NOG277302 KO:K13165
EMBL:AF459094 EMBL:BC047322 EMBL:BC067770 EMBL:BC112343
IPI:IPI00103497 IPI:IPI00375462 RefSeq:NP_001070667.1
RefSeq:NP_001257421.1 RefSeq:NP_631907.1 UniGene:Hs.49367
UniGene:Hs.519347 ProteinModelPortal:Q8WXA9 SMR:Q8WXA9
IntAct:Q8WXA9 STRING:Q8WXA9 PhosphoSite:Q8WXA9 DMDM:37537968
PaxDb:Q8WXA9 PeptideAtlas:Q8WXA9 PRIDE:Q8WXA9
Ensembl:ENST00000334121 Ensembl:ENST00000380918 GeneID:140890
KEGG:hsa:140890 UCSC:uc003jun.3 UCSC:uc003juo.3 CTD:140890
GeneCards:GC05P065435 HGNC:HGNC:17882 HPA:HPA037674 MIM:609268
neXtProt:NX_Q8WXA9 PharmGKB:PA38255 HOVERGEN:HBG079174
InParanoid:Q8WXA9 OMA:EKEQDKD OrthoDB:EOG4K3KWS ChiTaRS:SREK1
GenomeRNAi:140890 NextBio:84548 ArrayExpress:Q8WXA9 Bgee:Q8WXA9
CleanEx:HS_SFRS12 Genevestigator:Q8WXA9 GermOnline:ENSG00000153914
Uniprot:Q8WXA9
Length = 508
Score = 132 (51.5 bits), Expect = 9.5e-05, Sum P(2) = 9.5e-05
Identities = 39/159 (24%), Positives = 68/159 (42%)
Query: 98 KVGSGKKEDNALTKNVDSSRQRDGENRDLETKLKEDYVAKSNHRRTLKSEIRLKDRSPGN 157
K S K + ++ R R NR ++ K+ +KS H++ KS R K RS +
Sbjct: 199 KSRSSSKSHSRRKRSQSKHRSRS-HNRS-RSRQKDRRRSKSPHKKRSKSRERRKSRSRSH 256
Query: 158 EKDRGNRGSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQSIVDSRDEATKKHSRDLT 217
+D+ DT+ K + K K + + + + RD+ +K
Sbjct: 257 SRDKRK---DTREKIKEKERVKEKDREKEREREKEREKEKERGKNKDRDKEREKDREKDK 313
Query: 218 GKDRHADKSGEKSERESKRKHRNRDDEKNRDKSAAKKVD 256
KDR ++ E + K K + +D EK R+K +K++D
Sbjct: 314 EKDREREREKEHEKDRDKEKEKEQDKEKEREKDRSKEID 352
Score = 44 (20.5 bits), Expect = 9.5e-05, Sum P(2) = 9.5e-05
Identities = 16/44 (36%), Positives = 18/44 (40%)
Query: 349 SGHYRRHDGSTSGLGGYSPRKRRTEAAAKTPSPINRSPEKKSAK 392
S RR S S SPR +T + SP RS KK K
Sbjct: 377 SSRERRRRRSRSS--SRSPRTSKTIKRKSSRSPSPRSRNKKDKK 418
>DICTYBASE|DDB_G0268640 [details] [associations]
symbol:DDB_G0268640 "unknown" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND]
dictyBase:DDB_G0268640 EMBL:AAFI02000004 eggNOG:NOG12793
RefSeq:XP_646824.1 EnsemblProtists:DDB0233766 GeneID:8616507
KEGG:ddi:DDB_G0268640 InParanoid:Q55F46 OMA:HSTSEVS Uniprot:Q55F46
Length = 784
Score = 99 (39.9 bits), Expect = 9.7e-05, Sum P(2) = 9.7e-05
Identities = 72/337 (21%), Positives = 126/337 (37%)
Query: 152 DRSPGNEKDRGNRGSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQSIV--DSRDEAT 209
+ SP + D GS+ + + + SS+ + S +P+ G SH+ S V DS + A+
Sbjct: 28 NNSPSSSLDSLKPGSEGSISSSQSGSESSRGSSHSAPEVPT-GSSHSTSEVSSDSSNSAS 86
Query: 210 K-KHSRDLTGKDRHADKSGEKSERESKRKHRNRDDEKNRDKSAAKKVDLGKGHDLXXXXX 268
K S + + S +SE S H + + SA++ V +G H
Sbjct: 87 KVPTSSSHSASEASTGSSHSESEVPSGSTHSSSEVSTGSSNSASE-VSIGSSHSTSEVST 145
Query: 269 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRAQKRT--SYYDREHEGLPSHS 326
++ T S+ E SHS
Sbjct: 146 GSSHSTSEVPSGSSHSTSEVSTGSSHSASEVSIGSSHSTSEVPTGSSHSSSEVPTGSSHS 205
Query: 327 T-KISSGRQHSDIDSSRV-TGNGLSGHYRRHDGSTSGLGGYSPRKRRTEAAAKTPSPINR 384
+ ++ +G HS SS V TG S H + S + +A++ PS +
Sbjct: 206 SSEVPTGSSHS---SSEVPTG---SSHSSSEVPTGSSHSASEVPTGSSNSASEVPSDSSH 259
Query: 385 SPEKKSAKWDVAPVETYSVPS-NVHTSNQAASSNAHEM--VSSDPVTSTTQKPLAGISVS 441
S + + + E VP+ + H++++ + ++H V SD S ++ P G S S
Sbjct: 260 SASEVPSGSSHSASE---VPTGSSHSASEVPTGSSHSSSEVPSDSSNSASEVP-TGSSHS 315
Query: 442 ASLAKLNVSMDSVQL-TQSNRPMRRLCVENLPLSASE 477
S S + ++ T S+ + + LSASE
Sbjct: 316 NSEVPTGSSHSASEVSTGSSHSASEVSTSS-SLSASE 351
Score = 83 (34.3 bits), Expect = 9.7e-05, Sum P(2) = 9.7e-05
Identities = 48/209 (22%), Positives = 80/209 (38%)
Query: 692 GSVKSVNVVKYGDSNISTIQACEGNENTAS---AGVGQNLTNDETNEKGERLEEVTDHKS 748
GS +S + V SN S + G+ N+AS G + + T E TD +
Sbjct: 465 GSSRSTSEVSTSSSN-SASEVLSGSSNSASEVLTGSSNSASEVPTGSSNSASEVPTDSSN 523
Query: 749 IKNNELEILNDSKEVMEAGEVNNVKDNRPASGTMGDEPSQLCELDT---DMAVEYQARDS 805
+ ++S + G N+V + P + + + E+ T + E S
Sbjct: 524 SASEVPTGSSNSASEVPTGSSNSVTEV-PTGSSNSASSNSVSEVPTGSSNSVTEVSTTSS 582
Query: 806 TSEIVSQGVPTQVNTLKDSPCAHDDKVTCNIQLEHMSEENKSSAKEDLNLEEVNGNSEAF 865
S S ++V+T S + + T + H E S LN V+ NS++
Sbjct: 583 HSASGSSHSTSEVST--GSSQSGSEGSTGSNGSSHSGSEG-SIGSGSLNSGSVSHNSDSG 639
Query: 866 TGASNEMGMQSSAVENGDNENQDPNQGHI 894
+ SN S V NG + Q ++G I
Sbjct: 640 SEDSNGSSQSGSEVSNGSS--QSVSEGSI 666
>TAIR|locus:2037863 [details] [associations]
symbol:MBD10 "methyl-CPG-binding domain 10" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA;IDA] [GO:0008150
"biological_process" evidence=ND] [GO:0008327 "methyl-CpG binding"
evidence=ISS] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR001739 InterPro:IPR016177 Pfam:PF01429 PROSITE:PS50982
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005634
GO:GO:0006355 GO:GO:0006351 EMBL:AC007591 SUPFAM:SSF54171
Gene3D:3.30.890.10 GO:GO:0008327 EMBL:AY094439 EMBL:BT020367
EMBL:AK230256 IPI:IPI00519005 IPI:IPI00785822 PIR:G86287
RefSeq:NP_001185003.1 RefSeq:NP_563971.1 UniGene:At.27594
UniGene:At.70811 ProteinModelPortal:Q9XI36 SMR:Q9XI36 STRING:Q9XI36
PaxDb:Q9XI36 PRIDE:Q9XI36 ProMEX:Q9XI36 EnsemblPlants:AT1G15340.1
GeneID:838103 KEGG:ath:AT1G15340 TAIR:At1g15340 eggNOG:NOG328305
HOGENOM:HOG000120681 InParanoid:Q9XI36 OMA:KKESMEV
ProtClustDB:CLSN2917009 Genevestigator:Q9XI36 Uniprot:Q9XI36
Length = 384
Score = 114 (45.2 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 50/184 (27%), Positives = 86/184 (46%)
Query: 714 EGNENTASAGVGQN-LTNDETNEKGERLEEVTDHKSIKNNELEILNDSKEVMEAGEVNNV 772
EG E T + GQ + E ++GE+ E +N E E++ D KE ME + + +
Sbjct: 172 EG-EKTEAGKEGQTEIAEAEKEKEGEKAEA-------ENKEAEVVRDKKESMEV-DTSEL 222
Query: 773 KDNRPASGTMGDEPSQLCEL-DTDMAVEYQARDSTSEIVSQGVPTQVNTL-KDSPCAH-- 828
+ + SG +EPS++ L DT+M +A++ +E + P + T K S
Sbjct: 223 -EKKAGSGEGAEEPSKVEGLKDTEMK---EAQEVVTEADVEKKPAEEKTENKGSVTTEAN 278
Query: 829 -DDKVTC---NIQLEHMSEENKSSAKEDLNLEEVNGNSEAFTGASNEMGMQSSAVENGDN 884
+ VT N+ + +++ K S + D E N E T S+E +++A N +N
Sbjct: 279 GEQNVTLGEPNLDADAEADKGKESKEYDEKTTEAEANKENDTQESDEKKTEAAA--NKEN 336
Query: 885 ENQD 888
E Q+
Sbjct: 337 ETQE 340
Score = 59 (25.8 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 24/108 (22%), Positives = 48/108 (44%)
Query: 141 RRTLKSEIRLKDRSPGNEKD---RGNRGSDTKLKADVTKETSSKPNVKSEKLIPSQGRSH 197
RR+ + ++K +P +K+ + R S TK E + + VK + G++
Sbjct: 76 RRSSRISQKVKATTPTPDKEPLLKKRRSSLTKKDNKEAAEKNEEAAVKENMDVDKDGKTE 135
Query: 198 NQSIVDSRDEATKKHSRDLTGKDRHADKSGEKSERESKRKHRNRDDEK 245
N ++ E K+ ++ ++ + GEK+E E N++ EK
Sbjct: 136 N---AEAEKEKEKEGVTEIAEAEKE-NNEGEKTEAEKV----NKEGEK 175
Score = 53 (23.7 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 17/82 (20%), Positives = 37/82 (45%)
Query: 175 TKETSSKPNVKSEKLIPSQGRSHNQSIVDSRDEA-TKKHSRDLTGKDRHADKSGEKSERE 233
T ET + + S+K+ + + ++ R + TKK +++ K+ A E + +
Sbjct: 71 TGETPRRSSRISQKVKATTPTPDKEPLLKKRRSSLTKKDNKEAAEKNEEAAVK-ENMDVD 129
Query: 234 SKRKHRNRDDEKNRDKSAAKKV 255
K N + EK ++K ++
Sbjct: 130 KDGKTENAEAEKEKEKEGVTEI 151
>DICTYBASE|DDB_G0285403 [details] [associations]
symbol:DDB_G0285403 "RNA-binding region RNP-1
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 dictyBase:DDB_G0285403 GO:GO:0000166
EMBL:AAFI02000079 Gene3D:3.30.70.330 GO:GO:0003676 eggNOG:COG0724
KO:K14407 RefSeq:XP_638262.1 ProteinModelPortal:Q54NB8
EnsemblProtists:DDB0233345 GeneID:8625070 KEGG:ddi:DDB_G0285403
InParanoid:Q54NB8 OMA:YIGSINW Uniprot:Q54NB8
Length = 1035
Score = 120 (47.3 bits), Expect = 0.00010, Sum P(3) = 0.00010
Identities = 88/448 (19%), Positives = 153/448 (34%)
Query: 110 TKNVDSSRQRDGENRDLETKLKEDYVAKSNHRRTLKSEIRLKDRSPGNEKDRGNRGSDTK 169
+K+ SS + + + N R +S + +DR + + N S +
Sbjct: 243 SKHKKSSSNGNNNTNQTTSAIPTTSTTHKNSRSRSRSRSKSRDRKKSHYNNNNNNSSSSN 302
Query: 170 LKADVTKETSSKPNVKSEKLIPSQGRSHNQSIVDSRDEATKKHSRDLTGKDRHADKSGEK 229
+T + + +S S+ RS +++ SR K+ R + +
Sbjct: 303 NNKSLTSKDKRRSKSRSRSKSKSKSRSRSRTKSRSRSRDRKRSDRYYRRRSSYNSSDVGS 362
Query: 230 SERESKRKHRNRDDEKNRDKSAAKKVDLGKGHDLXXXXXXXXXXXXXXXXXXXXXXXXXX 289
R S +K RNR +++ KS ++ G+ H
Sbjct: 363 DSRRSSKKFRNRSS-RSKSKSRSRSRSSGRKHK---SSRSRSRSTTKSNRDTKSSRMDIS 418
Query: 290 XXXXXXXXXXXXXXXXPRAQKRTSYYDREHEGLPSHSTKISSGRQHSDIDSSRVTGNGLS 349
R+ KRT DR S S S+GR SR LS
Sbjct: 419 RSRSRSKSAGAGGRRRDRSPKRTKTTDRSK----SRSRSNSNGRSRKKRGRSRDRSRSLS 474
Query: 350 GHYRRHDG--STSGLGGYSPRKRRTEAAAKT-------PS--PINRSPEKKSAKWDVAPV 398
R+ G + S K T A+ T PS PI+ SP + APV
Sbjct: 475 SK-RKSSGWDNLPSESSNSENKNTTLQASPTITTFTVKPSENPIS-SPSSQFKPQIGAPV 532
Query: 399 ETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSASLAKLNVSMDSVQLTQ 458
+ P + + ++ SS P + +T I + + + +++ Q T
Sbjct: 533 IQTATP--LQQPPHQLHHHQTQIFSSIPTSPSTTI----IQPTTTTTPIPPTLN--QSTS 584
Query: 459 SNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEF 518
++ R+ V +L S +E + F + ++ + G + KG AF+E+
Sbjct: 585 QDQS--RIYVGSLHFSLTEDVIRA---TFSVFGNIKSLALGKDASG----KSKGYAFIEY 635
Query: 519 LTAEDASAAL-CCDGCSFSGSILKIKRP 545
E A+ AL G +K+ RP
Sbjct: 636 DNQESAAKALQSMTNYVMCGRAIKVARP 663
Score = 58 (25.5 bits), Expect = 0.00010, Sum P(3) = 0.00010
Identities = 19/87 (21%), Positives = 39/87 (44%)
Query: 553 IFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNED--HEEPCAFIEYVDQLVTPKAIAGL 610
I+IG I+ ++ V I FG + + N D + F+++ + AIA +
Sbjct: 771 IYIGSINWNVTEDQVRSIFSQFGRVISCFLMQNADTGKHKGFGFVDFELKKSADDAIATM 830
Query: 611 NGLKVGGQVLTAVQAVLDGSIMDNSGN 637
NG ++ G+ + + + +N+ N
Sbjct: 831 NGFELLGRSIKVGRPTKSSNNNNNNNN 857
Score = 51 (23.0 bits), Expect = 0.00010, Sum P(3) = 0.00010
Identities = 29/148 (19%), Positives = 55/148 (37%)
Query: 693 SVKSVNVVKYGDSNISTIQACEGNENTASAGVGQNLTNDETNEKGERLEEVTDHKSIKNN 752
S+K K ++N + + N NT + N+ N+ N ++ + NN
Sbjct: 839 SIKVGRPTKSSNNNNNNNNSINNNNNTNNNNNNNNINNNINNNNNNNNNN--NNTNTNNN 896
Query: 753 ELEILNDSKEVMEAGEVNNVKDNRPASGTMGDEPSQLCELDTDMAVEYQARDSTSE---- 808
+ N++ + G N+ D + + +EPS E + + D+T
Sbjct: 897 NINN-NNNNNIFNNG---NIVDK---TTFLENEPSLTSEQRIQLTQKLLGSDTTQPSRCL 949
Query: 809 -IVSQGVPTQVNTLKDSPCAHDDKVTCN 835
+ + G P + DS D + CN
Sbjct: 950 VLKNAGSPDDI----DSSFEDDIRSGCN 973
Score = 42 (19.8 bits), Expect = 0.00080, Sum P(3) = 0.00080
Identities = 12/52 (23%), Positives = 22/52 (42%)
Query: 846 KSSAKEDLNLEEVNGNSEAFTGASNEM---GMQSSAVENGDNENQDPNQGHI 894
KSS + N +N N+ +N + ++ N +N N + N +I
Sbjct: 847 KSSNNNNNNNNSINNNNNTNNNNNNNNINNNINNNNNNNNNNNNTNTNNNNI 898
>TAIR|locus:2178198 [details] [associations]
symbol:AT5G09880 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA;ISS] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006397
"mRNA processing" evidence=IEA] InterPro:IPR000504
InterPro:IPR006509 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005634 EMBL:CP002688 GO:GO:0000166
GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723 HSSP:Q14103
TIGRFAMs:TIGR01622 KO:K13091 OMA:AGWDTEI EMBL:AY054603
IPI:IPI00543371 RefSeq:NP_568220.1 UniGene:At.6946
ProteinModelPortal:Q93Y25 SMR:Q93Y25 STRING:Q93Y25 PRIDE:Q93Y25
EnsemblPlants:AT5G09880.1 GeneID:830848 KEGG:ath:AT5G09880
TAIR:At5g09880 InParanoid:Q93Y25 PhylomeDB:Q93Y25
ProtClustDB:CLSN2723619 Genevestigator:Q93Y25 Uniprot:Q93Y25
Length = 527
Score = 89 (36.4 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 43/167 (25%), Positives = 72/167 (43%)
Query: 94 EEYVKVGSG---KKEDNALTKNVDSSRQRDGENRDLETKLKEDYVA-KSNHRRTLKSEIR 149
E+ V+ G+G KKE++ ++ S R+R+G R E +E+ V+ +S R E
Sbjct: 10 EKTVEEGAGSNKKKEESGNERSERSYRKREGGERQGEEGGEEERVSSRSKKSRGDGEENG 69
Query: 150 LKDRSPGNEKDRGNRGSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQSIVDSRDEAT 209
R E+ R +R D + D +E S E+ + RS RD
Sbjct: 70 GGKRDRERERHRSSRDKDRE--RDKVREGSRDKESDRERSSKERDRSDRDK---PRDRER 124
Query: 210 KKHSRDLTGKDRHADKSGEKSERESKRKHRNRDDEKNRDKSAAKKVD 256
++ + + + R +K E ER S+R HR++ DE + D
Sbjct: 125 REREKRSSSRSRREEKEPEVVERGSRR-HRDKKDEP--------EAD 162
Score = 69 (29.3 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 40/202 (19%), Positives = 80/202 (39%)
Query: 751 NNELEILNDSKEVMEAGEVNNVKDNRPASGTMGDEPSQLCELDTDM-AVEYQARD----S 805
N +LEI + +V + +D+ P S D+ L+ A+ Q D +
Sbjct: 327 NGKLEIAGRTIKVSSVSDHIGTQDSAPKSADFDDDDGGGLALNAQSRAMLMQKLDRSGIA 386
Query: 806 TSEIVSQGVPTQVNTLKDSPCAHDD---KVTCNIQLEHMSEENKSSAKEDLNLEEVNGNS 862
TS + S GVP + P + V + E+ E L L+ + +
Sbjct: 387 TSIVGSLGVPGLNGAAFNQPGMNPSFPTSVLPTTAIPSFVNEHVGLPSECLLLKNMFDPA 446
Query: 863 EAFTGASNEMGMQSSAVENGDNENQDPNQGHIF----EPGCVFVEYMRAEASCMAAHSLH 918
T + ++ ++ + + P HI+ G V++ + EA+ A ++H
Sbjct: 447 TE-TEPNFDLEIRDDVAD--ECSKYGP-VNHIYVDKNSAGFVYLRFQSVEAAAAAQRAMH 502
Query: 919 RRLFDDRIVAVEYIPLNLYRAR 940
R F ++++ ++P + Y A+
Sbjct: 503 MRWFAQKMISATFMPPHEYEAK 524
Score = 62 (26.9 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 39/203 (19%), Positives = 80/203 (39%)
Query: 461 RPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLT 520
R R + +PL A+E+ + EF F + V+ V + +R KG ++EF
Sbjct: 165 RDQRTVFAYQMPLKATERDVYEF---FSKAGKVRDVRLIMDRNS---RRSKGVGYIEFYD 218
Query: 521 AEDASAALCCDGCSFSGSILKIKRPKEFVEVA----------------IFIGGISRTLSS 564
A+ G F G + +K + +A +++G + +S
Sbjct: 219 VMSVPMAIALSGQLFLGQPVMVKPSEAEKNLAQSNSTTVGGTGPADRKLYVGNLHFNMSE 278
Query: 565 KMVMEIVCAFGPLKAYHFEVNEDHEEPCAFIEYVDQLVTPKAIAGLNGLKVGGQVLTAVQ 624
+ +I AFGP++ ++ + + C ++ + + A + + G++ A +
Sbjct: 279 LQLRQIFEAFGPVELVQLPLDPETGQ-CKGFGFIQFVQLEHSKAAQ--IALNGKLEIAGR 335
Query: 625 AVLDGSIMDNSGNPPFHGIPKHA 647
+ S+ D+ G PK A
Sbjct: 336 TIKVSSVSDHIGTQD--SAPKSA 356
>RGD|620315 [details] [associations]
symbol:Ppig "peptidylprolyl isomerase G" species:10116 "Rattus
norvegicus" [GO:0000413 "protein peptidyl-prolyl isomerization"
evidence=IDA] [GO:0003755 "peptidyl-prolyl cis-trans isomerase
activity" evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0006457 "protein
folding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0016363 "nuclear matrix" evidence=IDA] [GO:0016607
"nuclear speck" evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR002130 InterPro:IPR020892 Pfam:PF00160 PRINTS:PR00153
PROSITE:PS00170 PROSITE:PS50072 EMBL:AF043642 RGD:620315
GO:GO:0006457 GO:GO:0016607 GO:GO:0016363 eggNOG:COG0652
GO:GO:0003755 SUPFAM:SSF50891 KO:K09566 CTD:9360 HOVERGEN:HBG048162
OrthoDB:EOG43FGWT HOGENOM:HOG000115659 EMBL:BC085723
IPI:IPI00194996 RefSeq:NP_113981.1 UniGene:Rn.10898
ProteinModelPortal:O55035 SMR:O55035 STRING:O55035
PhosphoSite:O55035 GeneID:83624 KEGG:rno:83624 UCSC:RGD:620315
InParanoid:O55035 NextBio:616195 Genevestigator:O55035
GermOnline:ENSRNOG00000007673 Uniprot:O55035
Length = 752
Score = 131 (51.2 bits), Expect = 0.00011, P = 0.00011
Identities = 88/364 (24%), Positives = 133/364 (36%)
Query: 90 VHTSEEYVKVGSGKKEDNALTKNVDSSRQRDGENRDLETKLKEDYVAKSNHRRTLKSEIR 149
V + E ++K G K E N + +N QR R E K+ + + R ++ E +
Sbjct: 372 VSSGERWIK-GD-KSELNEIKEN-----QRSPV-RVKEKKITDHRHMSESPNRKIEKEKK 423
Query: 150 LKD-RSPGNEKD-RGNRGSDTKL-KADVTKETSSKPNVKSEKLIPSQGRS-----HNQSI 201
+KD +S E+D R N D K K V K SK KS++ S+ R H
Sbjct: 424 VKDHKSESKERDIRRNSEKDDKYNKNKVKKRGKSKSRSKSKERSKSKERDSKHSRHEDKR 483
Query: 202 VDSRD-----EATKKHSRDLT--GKDRHADKSGEKSER-ESKRKHRNRDDEKNRDKSA-- 251
V SR E TK+ + L GKD+ +S E S++ ESK + K +D+ A
Sbjct: 484 VRSRSKERDHETTKEKEKQLDSKGKDQERSRSKENSKQVESKSNEHDHSKSKEKDRRAQS 543
Query: 252 -AKKVDLGKGHDLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRAQK 310
+++ DL K R +
Sbjct: 544 RSRERDLTKSKHSYNSRTRERSRSRDRSRRVRSRSHDRDRSRSKEYHRYREQEYRRRGRS 603
Query: 311 RTSYYDREHEGLPSHSTKISSGRQHSDIDSSRVTGNGLSGH-YRRHDGSTSGLGGYSPRK 369
R+ DR G S S K R+ S R + YR D +S S +
Sbjct: 604 RSR--DRRTPGR-SRS-KDRRRRRRDSRSSEREESQSRNKEKYRSQDSKSSHRKENSEGE 659
Query: 370 RRTEAAAKTPSPINRSPEKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTS 429
+R + ++ S N + EKK A D +PV S + + N + + PV
Sbjct: 660 KRMYSKSRDHSSSNNNREKK-ADIDQSPVSKTKQSSQDNEVKSSTLKNQEDEKTRSPVEK 718
Query: 430 TTQK 433
QK
Sbjct: 719 ENQK 722
>UNIPROTKB|O55035 [details] [associations]
symbol:Ppig "Peptidyl-prolyl cis-trans isomerase G"
species:10116 "Rattus norvegicus" [GO:0006457 "protein folding"
evidence=IEA] InterPro:IPR002130 InterPro:IPR020892 Pfam:PF00160
PRINTS:PR00153 PROSITE:PS00170 PROSITE:PS50072 EMBL:AF043642
RGD:620315 GO:GO:0006457 GO:GO:0016607 GO:GO:0016363 eggNOG:COG0652
GO:GO:0003755 SUPFAM:SSF50891 KO:K09566 CTD:9360 HOVERGEN:HBG048162
OrthoDB:EOG43FGWT HOGENOM:HOG000115659 EMBL:BC085723
IPI:IPI00194996 RefSeq:NP_113981.1 UniGene:Rn.10898
ProteinModelPortal:O55035 SMR:O55035 STRING:O55035
PhosphoSite:O55035 GeneID:83624 KEGG:rno:83624 UCSC:RGD:620315
InParanoid:O55035 NextBio:616195 Genevestigator:O55035
GermOnline:ENSRNOG00000007673 Uniprot:O55035
Length = 752
Score = 131 (51.2 bits), Expect = 0.00011, P = 0.00011
Identities = 88/364 (24%), Positives = 133/364 (36%)
Query: 90 VHTSEEYVKVGSGKKEDNALTKNVDSSRQRDGENRDLETKLKEDYVAKSNHRRTLKSEIR 149
V + E ++K G K E N + +N QR R E K+ + + R ++ E +
Sbjct: 372 VSSGERWIK-GD-KSELNEIKEN-----QRSPV-RVKEKKITDHRHMSESPNRKIEKEKK 423
Query: 150 LKD-RSPGNEKD-RGNRGSDTKL-KADVTKETSSKPNVKSEKLIPSQGRS-----HNQSI 201
+KD +S E+D R N D K K V K SK KS++ S+ R H
Sbjct: 424 VKDHKSESKERDIRRNSEKDDKYNKNKVKKRGKSKSRSKSKERSKSKERDSKHSRHEDKR 483
Query: 202 VDSRD-----EATKKHSRDLT--GKDRHADKSGEKSER-ESKRKHRNRDDEKNRDKSA-- 251
V SR E TK+ + L GKD+ +S E S++ ESK + K +D+ A
Sbjct: 484 VRSRSKERDHETTKEKEKQLDSKGKDQERSRSKENSKQVESKSNEHDHSKSKEKDRRAQS 543
Query: 252 -AKKVDLGKGHDLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRAQK 310
+++ DL K R +
Sbjct: 544 RSRERDLTKSKHSYNSRTRERSRSRDRSRRVRSRSHDRDRSRSKEYHRYREQEYRRRGRS 603
Query: 311 RTSYYDREHEGLPSHSTKISSGRQHSDIDSSRVTGNGLSGH-YRRHDGSTSGLGGYSPRK 369
R+ DR G S S K R+ S R + YR D +S S +
Sbjct: 604 RSR--DRRTPGR-SRS-KDRRRRRRDSRSSEREESQSRNKEKYRSQDSKSSHRKENSEGE 659
Query: 370 RRTEAAAKTPSPINRSPEKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTS 429
+R + ++ S N + EKK A D +PV S + + N + + PV
Sbjct: 660 KRMYSKSRDHSSSNNNREKK-ADIDQSPVSKTKQSSQDNEVKSSTLKNQEDEKTRSPVEK 718
Query: 430 TTQK 433
QK
Sbjct: 719 ENQK 722
>DICTYBASE|DDB_G0268098 [details] [associations]
symbol:nop58 "nucleolar protein 58" species:44689
"Dictyostelium discoideum" [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] dictyBase:DDB_G0268098 Pfam:PF01798
GenomeReviews:CM000150_GR GO:GO:0005730 EMBL:AAFI02000003
GO:GO:0042254 eggNOG:COG1498 InterPro:IPR012974 InterPro:IPR012976
InterPro:IPR002687 Pfam:PF08156 Pfam:PF08060 SMART:SM00931
PROSITE:PS51358 RefSeq:XP_647549.1 ProteinModelPortal:Q55FI4
STRING:Q55FI4 PRIDE:Q55FI4 EnsemblProtists:DDB0305289
GeneID:8616357 KEGG:ddi:DDB_G0268098 KO:K14565 OMA:HTELTEY
Uniprot:Q55FI4
Length = 638
Score = 130 (50.8 bits), Expect = 0.00012, P = 0.00012
Identities = 46/214 (21%), Positives = 79/214 (36%)
Query: 44 TKNLSENIKEDAMDVSNIPGDCTIENVXXXXXXXXXXXXXXXPGVDVHTSEEYVKVGSGK 103
TK+ + N D S+ E D E+ K K
Sbjct: 426 TKSATTNTTRDVATKSSKESSIKQEKQDVKMEEASSSDSDSSSDSDSSEEEKSKKSKKSK 485
Query: 104 KEDNALTKNVDSSRQRDGENRDL---ETKLKEDYVAKSNHRRTLKSEIRLKDRSPGNEKD 160
KE+ + K ++ E + E K KE+ K + ++ K E K +KD
Sbjct: 486 KEETPVAKEEKKEKKSKKEETPVAKEEKKEKEEKKEKKD-KKEKKEEKEDKKEEKKEKKD 544
Query: 161 RGNRGSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQSIVDSRDEATKKHSRDLTGKD 220
+ + +T + + KE K K EK + + + + +++ KK S K+
Sbjct: 545 KKEKTEETPVAKEEKKEKKEKKEEKEEKKDKKEKKEKKEEKEEKKEKKEKKSSSKEDKKE 604
Query: 221 RHADKSGEKSERESKRKHRNRDDEKNRDKSAAKK 254
+ K + S +E K K ++RD+E KS K
Sbjct: 605 KEEKKEKKSSSKEDK-KRKDRDEEPEEKKSKKSK 637
>UNIPROTKB|E2R749 [details] [associations]
symbol:SREK1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GeneTree:ENSGT00700000104035
EMBL:AAEX03001478 Ensembl:ENSCAFT00000012107 Uniprot:E2R749
Length = 510
Score = 131 (51.2 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 40/160 (25%), Positives = 70/160 (43%)
Query: 98 KVGSGKKEDNALTKNVDSSRQRDGENRDLETKLKEDYVAKSNHRRTLKSEIRLKDRSPGN 157
K S K + ++ R R NR ++ K+ +KS H++ KS R K RS
Sbjct: 199 KSRSSSKSHSRRKRSQSKHRSRS-HNRS-RSRQKDRRRSKSPHKKRSKSRERRKSRSRSR 256
Query: 158 EKDRGNRGSDTKLKA-DVTKETSSKPNVKSEKLIPSQGRSHNQSIVDSRDEATKKHSRDL 216
+D+ + + K+K + KE + + E+ + + + E K +D
Sbjct: 257 SRDK-RKDTREKIKEKERVKEKDREKEREKERDREKEREKEKERGKNKDKEREKDRDKDK 315
Query: 217 TGKDRHADKSGEKSERESKRKHRNRDDEKNRDKSAAKKVD 256
KDR ++ E + K K + +D EK RDK +K++D
Sbjct: 316 E-KDRERERDKEHDKERDKEKEKEQDKEKERDKDRSKEID 354
Score = 127 (49.8 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 36/164 (21%), Positives = 79/164 (48%)
Query: 102 GKKEDNALTKNVDSSRQRDGENRDLETKLKEDYVAKSNHRRTLKSEIRLKDRSPGNE--K 159
G+ + +K+ SS+ R ++K + ++S++R + + R + +SP + K
Sbjct: 190 GRSRSHTRSKSRSSSKSHSRRKRS-QSKHR----SRSHNRSRSRQKDRRRSKSPHKKRSK 244
Query: 160 DRGNRGSDTKLKA-DVTKETSSKPNVKSEKLIPSQGRSHNQSIVDSRDEATKKHSRDLTG 218
R R S ++ ++ D K+T K +K ++ + + R + R++ +K
Sbjct: 245 SRERRKSRSRSRSRDKRKDTREK--IKEKERVKEKDREKEREKERDREKEREKEKERGKN 302
Query: 219 KDRHADKSGEKSERESKRKHRNRDDEKNRDKSAAKKVDLGKGHD 262
KD+ +K +K + + + + R+++ +K RDK K+ D K D
Sbjct: 303 KDKEREKDRDKDKEKDRERERDKEHDKERDKEKEKEQDKEKERD 346
Score = 44 (20.5 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 16/44 (36%), Positives = 18/44 (40%)
Query: 349 SGHYRRHDGSTSGLGGYSPRKRRTEAAAKTPSPINRSPEKKSAK 392
S RR S S SPR +T + SP RS KK K
Sbjct: 379 SSRERRRRRSRSS--SRSPRTSKTIKRKSSRSPSPRSRNKKDKK 420
>ZFIN|ZDB-GENE-060503-229 [details] [associations]
symbol:fam133b "family with sequence similarity
133, member B" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
ZFIN:ZDB-GENE-060503-229 GeneTree:ENSGT00690000102159 CTD:257415
eggNOG:NOG45308 HOVERGEN:HBG088046 InterPro:IPR026766
PANTHER:PTHR31911 EMBL:BX936336 EMBL:CT027751 EMBL:BC076108
EMBL:BC095122 EMBL:BC115144 EMBL:BC128660 IPI:IPI00501968
RefSeq:NP_001073556.1 UniGene:Dr.14852 Ensembl:ENSDART00000089547
GeneID:790942 KEGG:dre:790942 InParanoid:A1A5I1 OMA:PRISIWE
NextBio:20930426 ArrayExpress:A1A5I1 Bgee:A1A5I1 Uniprot:A1A5I1
Length = 259
Score = 123 (48.4 bits), Expect = 0.00013, P = 0.00013
Identities = 42/157 (26%), Positives = 70/157 (44%)
Query: 101 SGKKEDNALTKNVDSSRQRDGENRDLETKLKEDYVAKSNHRRTLKSEIRLKDRSPGNEKD 160
S ++ + + SS D E+ D + LK+ K + R E + + E
Sbjct: 114 SSSSSSSSSSSDSSSSSSSDAEDDDEKKNLKKKKKRKRSSTRKASDETDSESETDSRESF 173
Query: 161 RGNRGSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQSIVDS-RDEATKKHSRDLTGK 219
+ R K D K+ K + K K SQ S ++S VD D KKHS + K
Sbjct: 174 KKKRK-----KTDGEKDKDEKDSRKKRKAERSQSESSDESDVDKDADSKKKKHSSE--EK 226
Query: 220 DRHADKSGEKSERESKRKHRNRDDEKNRDKSAAKKVD 256
++ DKS +K + K+KH+ +K R K+++ ++D
Sbjct: 227 EKITDKSKKKKK---KKKHKKHSKKKKR-KTSSSELD 259
>POMBASE|SPBC146.07 [details] [associations]
symbol:prp2 "U2AF large subunit (U2AF-59)" species:4896
"Schizosaccharomyces pombe" [GO:0000243 "commitment complex"
evidence=IDA] [GO:0000348 "mRNA branch site recognition"
evidence=ISS] [GO:0000349 "generation of catalytic spliceosome for
first transesterification step" evidence=IDA] [GO:0003729 "mRNA
binding" evidence=ISS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005686 "U2 snRNP" evidence=TAS] [GO:0030515 "snoRNA binding"
evidence=TAS] [GO:0045292 "mRNA cis splicing, via spliceosome"
evidence=IMP] InterPro:IPR000504 InterPro:IPR006529
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
PomBase:SPBC146.07 GO:GO:0000166 EMBL:CU329671 GO:GO:0030515
GO:GO:0003729 Gene3D:3.30.70.330 GenomeReviews:CU329671_GR
GO:GO:0000243 GO:GO:0000349 GO:GO:0005686 GO:GO:0045292
OrthoDB:EOG44XNS9 GO:GO:0000348 eggNOG:NOG298004 KO:K12837
TIGRFAMs:TIGR01642 OMA:TQMGGLP EMBL:L22577 EMBL:AB027985 PIR:A48250
RefSeq:NP_595396.1 ProteinModelPortal:P36629 IntAct:P36629
STRING:P36629 PRIDE:P36629 EnsemblFungi:SPBC146.07.1 GeneID:2539645
KEGG:spo:SPBC146.07 NextBio:20800799 Uniprot:P36629
Length = 517
Score = 95 (38.5 bits), Expect = 0.00013, Sum P(4) = 0.00013
Identities = 41/171 (23%), Positives = 74/171 (43%)
Query: 380 SPINRSPEKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGIS 439
+PIN+ K+S WD+ P Y + T++QA S + + T + L +
Sbjct: 123 TPINQWKRKRSL-WDIKP-PGYELV----TADQAKMSGVFPLPGAPRAAVTDPEKLLEFA 176
Query: 440 VSASLAKLNVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLNNFLLSSGVQHVHGS 499
SA + +Q ++R RRL V +P E A + F+ + +S+ H +
Sbjct: 177 RSAE-GSIIAPPPPLQ-PGASRQARRLVVTGIPNEFVEDAFVSFIEDLFIST-TYHKPET 233
Query: 500 LPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSI-LKIKRPKEFV 549
+ +E+ A +E T EDA+ S+S + LK +R + ++
Sbjct: 234 KHFSSVNVCKEENFAILEVATPEDATFLWGLQSESYSNDVFLKFQRIQNYI 284
Score = 71 (30.1 bits), Expect = 0.00013, Sum P(4) = 0.00013
Identities = 31/116 (26%), Positives = 53/116 (45%)
Query: 553 IFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVN--EDHEEPCAFIEYVDQLVTPKAIAGL 610
I+I + L V+E++ FG L ++ N + + F E+ + AI+GL
Sbjct: 312 IYISNLPLNLGEDQVVELLKPFGDLLSFQLIKNIADGSSKGFCFCEFKNPSDAEVAISGL 371
Query: 611 NGLKVGGQVLTAVQAV--LDGSIMDNS-GNPPFHGIPKHALPLLKKPTEVLKLKNV 663
+G G L A A L+ +++D S G + K + + PT VL+L N+
Sbjct: 372 DGKDTYGNKLHAQFACVGLNQAMIDKSNGMAILTELAKASSQSI--PTRVLQLHNL 425
Score = 48 (22.0 bits), Expect = 0.00013, Sum P(4) = 0.00013
Identities = 11/42 (26%), Positives = 21/42 (50%)
Query: 898 GCVFVEYMRAEASCMAAHSLHRRLFDDRIVAVEYIPLNLYRA 939
G VFV Y ++ +A + F+DR + + + + Y+A
Sbjct: 473 GKVFVRYSDIRSAEVAMEEMKGCKFNDRTIVIAFYGEDCYKA 514
Score = 43 (20.2 bits), Expect = 0.00013, Sum P(4) = 0.00013
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 221 RHADKSGEKSERESKRKHRNRDDEKNR 247
R D+S + RES R+ R+DE+ R
Sbjct: 52 RRRDESDFRRHRES-RERSYREDERPR 77
Score = 39 (18.8 bits), Expect = 0.00032, Sum P(4) = 0.00032
Identities = 10/31 (32%), Positives = 18/31 (58%)
Query: 224 DKSGEKSERESK--RKHRN-RDDEKNRDKSA 251
D S S S+ ++HR+ RD+E R++ +
Sbjct: 2 DLSSRLSSGSSRIPKRHRDYRDEEPRRERGS 32
>UNIPROTKB|E1BV45 [details] [associations]
symbol:RNPS1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] [GO:0003730 "mRNA 3'-UTR binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
GO:GO:0005737 GO:GO:0000184 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003730 GeneTree:ENSGT00700000104336 EMBL:AADN02049470
IPI:IPI00602926 ProteinModelPortal:E1BV45
Ensembl:ENSGALT00000015109 OMA:LNPPKCT Uniprot:E1BV45
Length = 243
Score = 89 (36.4 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 32/120 (26%), Positives = 44/120 (36%)
Query: 137 KSNHRRTLKSEIRLKDRSPGNEKDRGNRGSDTKLKADVTKETSSKPNVKSEKLIPSQGRS 196
K R KS+ R KD++ E +RG D K SS +S S S
Sbjct: 30 KRKDRSEEKSKDRSKDKAATKESGEKDRGRDKTRKRRSASSGSSSTRSRSSSTSSSGSSS 89
Query: 197 HNQSIVDSRDEATKKHSRDLTGKDRHADKSGEKSERESKRKHRNRDDEKNRDKSAAKKVD 256
S S + S + + S S S+R+H NR ++R KS K D
Sbjct: 90 STGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSPSPSRRRHDNR--RRSRSKSKPPKRD 147
Score = 78 (32.5 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 21/78 (26%), Positives = 42/78 (53%)
Query: 553 IFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNE--DH-EEPCAFIEYVDQLVTPKAIAG 609
+ +G ++R ++ +MEI +G +K V+ H + A++E+ + KA+
Sbjct: 163 VHVGRLTRNVTKDHIMEIFSTYGKIKMIDMPVDRLNPHLSKGYAYVEFENPDDAEKALKH 222
Query: 610 LNGLKVGGQVLTAVQAVL 627
++G ++ GQ +TA AVL
Sbjct: 223 MDGGQIDGQEITAT-AVL 239
>ZFIN|ZDB-GENE-030131-5228 [details] [associations]
symbol:rnps1 "RNA binding protein S1, serine-rich
domain" species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 ZFIN:ZDB-GENE-030131-5228 GO:GO:0005737 GO:GO:0008380
GO:GO:0000166 GO:GO:0016607 GO:GO:0006397 Gene3D:3.30.70.330
GO:GO:0003723 HSSP:Q9V535 GeneTree:ENSGT00700000104336 CTD:10921
eggNOG:NOG331533 HOGENOM:HOG000044325 KO:K14325 EMBL:BC057251
EMBL:BC065953 IPI:IPI00490683 RefSeq:NP_956055.1 UniGene:Dr.75879
ProteinModelPortal:Q6PG31 STRING:Q6PG31 Ensembl:ENSDART00000128731
GeneID:327020 KEGG:dre:327020 InParanoid:Q6PG31 NextBio:20809844
Bgee:Q6PG31 Uniprot:Q6PG31
Length = 283
Score = 92 (37.4 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 32/121 (26%), Positives = 49/121 (40%)
Query: 137 KSNHRRTLKSEIRLKDRSPGNEKDRGNRGSDTKLKADVTKETSSKPNVKSEKLIPSQGRS 196
K R K R K+++P E RG D K++ + T S + S S G S
Sbjct: 7 KRRERSEDKPRERGKEKAPAKEGAEKERGRD-KIRKRRSNSTGSSSSRSSSSSSSSSGSS 65
Query: 197 HNQSIVDSRDEATKKHSRDLTGKDRHADKSGEK-SERESKRKHRNRDDEKNRDKSAAKKV 255
S S + + + R + SG S S+R+H NR +++ KS K+
Sbjct: 66 SGSSSGSSSSSGSSRSGS--SSSSRSSSSSGSSGSPSPSRRRHDNRRRSRSKSKSQ-KRT 122
Query: 256 D 256
D
Sbjct: 123 D 123
Score = 77 (32.2 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 19/78 (24%), Positives = 40/78 (51%)
Query: 553 IFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDH---EEPCAFIEYVDQLVTPKAIAG 609
+++G ++R ++ + EI +G +K + H + A++EY KA+
Sbjct: 139 LYLGRLTRNVTKDHIQEIFATYGKIKMIDMPSDRLHPNVSKGYAYVEYESPEDAQKALKH 198
Query: 610 LNGLKVGGQVLTAVQAVL 627
++G ++ GQ +TA A+L
Sbjct: 199 MDGGQIDGQEITAT-AIL 215
>UNIPROTKB|Q2T9Y0 [details] [associations]
symbol:RSRC1 "Serine/Arginine-related protein 53"
species:9913 "Bos taurus" [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0006913 "nucleocytoplasmic transport" evidence=ISS] [GO:0016607
"nuclear speck" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0046677 "response to antibiotic" evidence=IEA] [GO:0006468
"protein phosphorylation" evidence=IEA] [GO:0000380 "alternative
mRNA splicing, via spliceosome" evidence=IEA] GO:GO:0005737
GO:GO:0016607 GO:GO:0006468 GO:GO:0046677 GO:GO:0006913
GO:GO:0000398 GO:GO:0000380 GeneTree:ENSGT00700000104061
EMBL:BC111215 IPI:IPI00724758 RefSeq:NP_001068872.1
UniGene:Bt.29540 STRING:Q2T9Y0 Ensembl:ENSBTAT00000044707
GeneID:509437 KEGG:bta:509437 CTD:51319 eggNOG:NOG238475
HOGENOM:HOG000129917 HOVERGEN:HBG060410 InParanoid:Q2T9Y0
OMA:EKWFQRL OrthoDB:EOG4GB77K NextBio:20868969 Uniprot:Q2T9Y0
Length = 334
Score = 103 (41.3 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 38/164 (23%), Positives = 69/164 (42%)
Query: 101 SGKKEDNALTKNVDSSRQRDGENRDLETKLKEDYVAKSNHRRTLKSEIRLKDRSPGNEKD 160
S E+ + +K R+R + +++ Y K RR+ R K RS +
Sbjct: 5 SSDTEEESRSKRKKKHRRRSSSSSSSDSRT---YSRKKGGRRS-----RSKSRSWSRDLQ 56
Query: 161 RGNRGSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQSIVDSRDEATKKHSRDLTGKD 220
+ D + + + +SS + + S+GR + + SR ++ + SR
Sbjct: 57 PRSHSYDRR-RRHRSSSSSSYGSRRKRSQSRSRGRGKSYRVQRSRSKSRTRRSRSRPRPR 115
Query: 221 RHADKSGEKSERESKRKHRNRDDEKNRDKSAAKKV-DLGKGHDL 263
H+ S S R ++ + R+R+ K RDK +K D GK +L
Sbjct: 116 SHSRSSERSSHRRTRSRSRDRERRKGRDKEKREKEKDKGKDKEL 159
Score = 67 (28.6 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 28/104 (26%), Positives = 50/104 (48%)
Query: 710 IQACEGNENTASAGVGQNLTNDETNEKGERLEEVTDHKSIKNNEL--EILNDSKEVMEAG 767
++A E NE A + D+T E+++ V + ++I+++ + SKE+ +A
Sbjct: 201 LKAKERNEEEAK----RRKEEDQTTLV-EQVKRVKEIEAIESDSFVQQTFRSSKEIKKAV 255
Query: 768 EVNNVKDNRPASG---TMGDEPSQLCELDTD---MAVEYQARDS 805
E + VK SG + D PS E+D A++YQ +S
Sbjct: 256 EASEVKHAATTSGPASVVADPPSNEKEIDPSNIPTAIKYQDDNS 299
>ZFIN|ZDB-GENE-091204-67 [details] [associations]
symbol:si:dkey-33i22.3 "si:dkey-33i22.3"
species:7955 "Danio rerio" [GO:0035556 "intracellular signal
transduction" evidence=IEA] InterPro:IPR003533 Pfam:PF03607
PROSITE:PS50309 ZFIN:ZDB-GENE-091204-67 GO:GO:0035556 GO:GO:0005622
Gene3D:3.10.20.230 SUPFAM:SSF89837 GeneTree:ENSGT00530000063898
EMBL:BX842684 IPI:IPI00859599 Ensembl:ENSDART00000122595
Ensembl:ENSDART00000151881 Uniprot:E7F542
Length = 3919
Score = 114 (45.2 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 43/163 (26%), Positives = 65/163 (39%)
Query: 729 TNDETNEKGERLEEVTDHKSIKNNELEILNDSK-EVMEAGEVNNVKDNRPASGTMGDEPS 787
T DE E ++E V D + + +E N S E E GE N +N A T DE
Sbjct: 3439 TADEC-ETSSKIESVEDEEIAEAESVEESNRSNDETAENGETANNNNNNNAEDTQTDEAD 3497
Query: 788 QLCELDTDMAVEYQARDSTSEIVSQGVPTQVNTLKDSPCAHDDKVTCNIQLEHMSEENKS 847
E DT + ++ + ++G + ++ DD+ N + +
Sbjct: 3498 TAEESDTGYEDTTKDSETAEDETAEGTSAEERGTEEQRADDDDETGENT--DDVDNTGDV 3555
Query: 848 SAKEDLNLEEVNGNSEAFTGASNEMGMQSSAVENGDNENQDPN 890
SA+E E E T A +EM + A E+G E QD N
Sbjct: 3556 SAEEK-ETSEAESEDEGTTNAESEMH-EGKATEDGSTE-QDEN 3595
Score = 80 (33.2 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 35/161 (21%), Positives = 72/161 (44%)
Query: 101 SGKKEDNALTKNVDSSRQ---RDGENRDLETKLKEDYVAKSNHRRTLKSEIRLKDRSPG- 156
+ +++++ +DS+ Q + E +L K +D +A+ + + +SE +DR P
Sbjct: 2874 AAEQDEDQEEDGIDSAGQDKITEDETGELSEKDNDD-IAEVSEKA--ESETA-EDRQPAK 2929
Query: 157 NEKDRGNRGSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQSIVDSRDEATKKHSRDL 216
+E D G+ DT + + + S+ +K+ + +Q+ VD K
Sbjct: 2930 DETDEGDSVIDTAEENEAAESESADGQTAEDKIKQDKQTDEDQATVDGESVEEKTSDGGQ 2989
Query: 217 TGKDRHADKSGEKSERESKR-KHRNRDD-----EKNRDKSA 251
+D+ K G+ ++ E+ +H D+ EK DKS+
Sbjct: 2990 AAEDK-TSKDGQTADDETAEDEHIIEDETAEEIEKFEDKSS 3029
>TAIR|locus:2178451 [details] [associations]
symbol:AT5G53440 "AT5G53440" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0005829 "cytosol" evidence=IDA] [GO:0000226
"microtubule cytoskeleton organization" evidence=RCA] [GO:0000911
"cytokinesis by cell plate formation" evidence=RCA] [GO:0006635
"fatty acid beta-oxidation" evidence=RCA] [GO:0009630
"gravitropism" evidence=RCA] [GO:0016558 "protein import into
peroxisome matrix" evidence=RCA] GO:GO:0005829 EMBL:CP002688
GenomeReviews:BA000015_GR EMBL:AB020754 IPI:IPI00547660
RefSeq:NP_200156.1 UniGene:At.43905 PaxDb:Q9LV05 PRIDE:Q9LV05
EnsemblPlants:AT5G53440.1 GeneID:835425 KEGG:ath:AT5G53440
TAIR:At5g53440 eggNOG:NOG294538 InParanoid:Q9LV05 OMA:WERQKER
PhylomeDB:Q9LV05 ProtClustDB:CLSN2686539 Genevestigator:Q9LV05
Uniprot:Q9LV05
Length = 1181
Score = 118 (46.6 bits), Expect = 0.00017, Sum P(4) = 0.00017
Identities = 49/190 (25%), Positives = 84/190 (44%)
Query: 93 SEEYVKVGSGK-KEDNALTKNVDSSRQRDGENR-----DLETKLKEDYVAKSNHRRTLKS 146
SE+ + K KE+++ T V S G+ R + + E+Y + S+ RR KS
Sbjct: 22 SEKETSLKEKKSKEESSTTVRV-SKESGSGDKRKEYYDSVNGEYYEEYTSSSSKRRKGKS 80
Query: 147 EIRLKDRSPGNEKDRGNRGSDTKLKADVTK-------ETSSKPNVKSEKLIPSQGRSHNQ 199
DR G + D+G TK+ ++ ++ E + K + KS+ R ++
Sbjct: 81 GESGSDRWNGKDDDKGESSKKTKVSSEKSRKRDEGDGEETKKSSGKSDGKHRESSRRESK 140
Query: 200 SIVDSRDEATKKHSRD--LTGKDRHADKSG-EKSERESKRKHRNRDDEKNRDK-SAAKKV 255
+ +D K+ D G D H K+G +K+E +++ R+ E +K S K+
Sbjct: 141 DVDKEKDRKYKEGKSDKFYDGDDHHKSKAGSDKTESKAQDHARSPGTENYTEKRSRRKRD 200
Query: 256 DLGKG---HD 262
D G G HD
Sbjct: 201 DHGTGDKHHD 210
Score = 58 (25.5 bits), Expect = 0.00017, Sum P(4) = 0.00017
Identities = 41/188 (21%), Positives = 81/188 (43%)
Query: 708 STIQACEGN-ENTASAGVGQNLTNDETNEKGERLE-EVTDHKSIKNNELEILNDSKEVME 765
S+I+A + + + + Q ++ G ++E E D S N ++S E +
Sbjct: 976 SSIEATDMKIADVSDSDTSQKELQKVSSNAGAKMETETRDEGSSSPNP----DNSPEALN 1031
Query: 766 AGEVNNVKDNRPASGTMGDEPSQLCELDTDMAVEYQARDSTSEIVSQGVPTQVNTLKDSP 825
A ++++ + A + E S+ +A+++ D + G T++ +P
Sbjct: 1032 AVSSDHIEGSEEAMASDHIEGSEEA-----VALDHIEGDEQEAKLDDGAGVD-QTMETAP 1085
Query: 826 CAHD-----DKVTCNIQ---LEHMSEENKSSAKEDLNLEEVNGNSEAFTGASNEMGMQSS 877
HD D VT + LE M + + ED N+EE +E GA++ G ++
Sbjct: 1086 -EHDGVPEGDAVTLTVAPPTLEAMDVDERKDLSEDENMEE----AEEKKGAND--GEEAE 1138
Query: 878 AVENGDNE 885
A ++GD +
Sbjct: 1139 A-DDGDGD 1145
Score = 54 (24.1 bits), Expect = 0.00017, Sum P(4) = 0.00017
Identities = 24/88 (27%), Positives = 38/88 (43%)
Query: 306 PRAQKRTSYYDREHEGLPSHSTKISSGRQHSDID--SSRVTGNGLSGHYRRHDGSTSGLG 363
P Q +S E+ TK +S R+ +++ S R T +S + G+
Sbjct: 454 PERQLSSSVVQEENGNASDQITKGASSREVAELSGGSERGTRQKVS---EKTANMEDGVL 510
Query: 364 GYSPRKRRTEAAAKTPSP-INRSPEKKS 390
G P +R + AA +P P + RSP S
Sbjct: 511 GEFPAER-SFAAKASPRPMVERSPSSTS 537
Score = 41 (19.5 bits), Expect = 0.00017, Sum P(4) = 0.00017
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 486 NFLLSSGVQHVHG 498
N + SSG H+HG
Sbjct: 717 NMMDSSGASHMHG 729
>UNIPROTKB|J9P0H2 [details] [associations]
symbol:SREK1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00700000104035 KO:K13165 CTD:140890 OMA:EKEQDKD
EMBL:AAEX03001478 RefSeq:XP_544361.3 Ensembl:ENSCAFT00000044884
GeneID:487233 KEGG:cfa:487233 Uniprot:J9P0H2
Length = 626
Score = 131 (51.2 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 40/160 (25%), Positives = 70/160 (43%)
Query: 98 KVGSGKKEDNALTKNVDSSRQRDGENRDLETKLKEDYVAKSNHRRTLKSEIRLKDRSPGN 157
K S K + ++ R R NR ++ K+ +KS H++ KS R K RS
Sbjct: 315 KSRSSSKSHSRRKRSQSKHRSRS-HNRS-RSRQKDRRRSKSPHKKRSKSRERRKSRSRSR 372
Query: 158 EKDRGNRGSDTKLKA-DVTKETSSKPNVKSEKLIPSQGRSHNQSIVDSRDEATKKHSRDL 216
+D+ + + K+K + KE + + E+ + + + E K +D
Sbjct: 373 SRDK-RKDTREKIKEKERVKEKDREKEREKERDREKEREKEKERGKNKDKEREKDRDKDK 431
Query: 217 TGKDRHADKSGEKSERESKRKHRNRDDEKNRDKSAAKKVD 256
KDR ++ E + K K + +D EK RDK +K++D
Sbjct: 432 E-KDRERERDKEHDKERDKEKEKEQDKEKERDKDRSKEID 470
Score = 127 (49.8 bits), Expect = 0.00058, Sum P(2) = 0.00058
Identities = 36/164 (21%), Positives = 79/164 (48%)
Query: 102 GKKEDNALTKNVDSSRQRDGENRDLETKLKEDYVAKSNHRRTLKSEIRLKDRSPGNE--K 159
G+ + +K+ SS+ R ++K + ++S++R + + R + +SP + K
Sbjct: 306 GRSRSHTRSKSRSSSKSHSRRKRS-QSKHR----SRSHNRSRSRQKDRRRSKSPHKKRSK 360
Query: 160 DRGNRGSDTKLKA-DVTKETSSKPNVKSEKLIPSQGRSHNQSIVDSRDEATKKHSRDLTG 218
R R S ++ ++ D K+T K +K ++ + + R + R++ +K
Sbjct: 361 SRERRKSRSRSRSRDKRKDTREK--IKEKERVKEKDREKEREKERDREKEREKEKERGKN 418
Query: 219 KDRHADKSGEKSERESKRKHRNRDDEKNRDKSAAKKVDLGKGHD 262
KD+ +K +K + + + + R+++ +K RDK K+ D K D
Sbjct: 419 KDKEREKDRDKDKEKDRERERDKEHDKERDKEKEKEQDKEKERD 462
Score = 44 (20.5 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 16/44 (36%), Positives = 18/44 (40%)
Query: 349 SGHYRRHDGSTSGLGGYSPRKRRTEAAAKTPSPINRSPEKKSAK 392
S RR S S SPR +T + SP RS KK K
Sbjct: 495 SSRERRRRRSRSS--SRSPRTSKTIKRKSSRSPSPRSRNKKDKK 536
>DICTYBASE|DDB_G0276577 [details] [associations]
symbol:fray2 "FRAY subfamily protein kinase"
species:44689 "Dictyostelium discoideum" [GO:0016772 "transferase
activity, transferring phosphorus-containing groups" evidence=IEA]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004672 "protein kinase activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016310
"phosphorylation" evidence=IEA] [GO:0016301 "kinase activity"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220
dictyBase:DDB_G0276577 GO:GO:0005524 GO:GO:0046872 eggNOG:COG0515
SUPFAM:SSF56112 GO:GO:0004674 GenomeReviews:CM000151_GR
EMBL:AAFI02000015 HSSP:Q13153 RefSeq:XP_643160.1
ProteinModelPortal:Q551H4 STRING:Q551H4 EnsemblProtists:DDB0229911
GeneID:8620567 KEGG:ddi:DDB_G0276577 KO:K08835 OMA:ATHISYL
Uniprot:Q551H4
Length = 1028
Score = 128 (50.1 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 46/156 (29%), Positives = 82/156 (52%)
Query: 101 SGKKEDNALTKNV--DSSRQRDGENRDLET-KLKEDYVAKSNHRRTLKSEIRLKDRSPGN 157
S K N+ ++NV D R+RD NR + + +E + R +S R +DRS
Sbjct: 741 SNKTYKNSRSRNVSRDRERERDRHNRSRDRDRERERERDRDRERDRDRSRDRSRDRSRDR 800
Query: 158 EKDRG-NRGSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQSIVDSRDEATKKHSRDL 216
E+DR +R D D +++ S + + ++ S+ RS ++S SRD ++ SRD
Sbjct: 801 ERDRSRDRSRDRDRSRDRSRDRSRERD--RDR---SRDRSRDRS--RSRDSDSRDRSRDR 853
Query: 217 TGKDRHADKSGEKSERESKRKHRNR--DDEKNRDKS 250
+ H+++ +S R+S+ K R+R D +++RD+S
Sbjct: 854 SRS--HSNRRRSRS-RDSRNKSRDRSSDSDRSRDRS 886
Score = 52 (23.4 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 25/105 (23%), Positives = 45/105 (42%)
Query: 773 KDNRPASGTMGDE-PSQLCELDTDMA-VEYQARDSTSEIVSQGVPTQVNTLKDSPCAHDD 830
K +R SG ++ S+L T ++ +E + T+ + Q + N SP +
Sbjct: 898 KSSRGTSGRKNNKIQSKLDSQATHISYLEDKISTLTNWLQQQNLLNTSNGQVLSPTDPNL 957
Query: 831 KVTCNIQLEHMSEENKSSAKEDLNLEE-VNGNSEAFTGASNEMGM 874
QL+ + EN E++NL+ VNG++ + GM
Sbjct: 958 VSKLQTQLDVLQSENSYLRNENINLKTIVNGSNSTNNSLNQSSGM 1002
>WB|WBGene00006961 [details] [associations]
symbol:xnp-1 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000003 "reproduction"
evidence=IMP] [GO:0008406 "gonad development" evidence=IMP]
[GO:0040025 "vulval development" evidence=IMP] [GO:0006915
"apoptotic process" evidence=IMP] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0002009
"morphogenesis of an epithelium" evidence=IMP] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0009792 GO:GO:0002009 GO:GO:0006915 GO:GO:0008406
GO:GO:0003677 GO:GO:0006281 GO:GO:0040035 GO:GO:0004386
GO:GO:0040025 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AF134186 EMBL:FO080106 PIR:T34036
RefSeq:NP_001020958.1 ProteinModelPortal:Q9U7E0 SMR:Q9U7E0
STRING:Q9U7E0 PaxDb:Q9U7E0 GeneID:172077 KEGG:cel:CELE_B0041.7
UCSC:B0041.7 CTD:172077 WormBase:B0041.7 HOGENOM:HOG000199608
InParanoid:Q9U7E0 KO:K10779 NextBio:873923 Uniprot:Q9U7E0
Length = 1359
Score = 128 (50.1 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 42/169 (24%), Positives = 82/169 (48%)
Query: 89 DVHTSEEYVKVGSGKKEDNALTKNVDSSRQRDG-ENRDLETKLKEDYVAKSNHRRTLKSE 147
D S+ KV KKE + + SS D E R+ ++K K K + SE
Sbjct: 100 DRKKSKSKKKVDQKKKEKSKKKRTTSSSEDEDSDEEREQKSKKKSKKTKKQTSSES--SE 157
Query: 148 IRLKDRSPGNEKDRGNRGSDTKLKADVTKETSS--KPNVKSEKLIPSQGRSHNQSIVDSR 205
++R +K + N+ K +A+ ++E+ KP+ KS+K + + +S ++S +
Sbjct: 158 ESEEERKV--KKSKKNKEKSVKKRAETSEESDEDEKPSKKSKKGLKKKAKSESESESEDE 215
Query: 206 DEA--TKKHSRDLTGKDRHA-DKSGEKSERESKRKHRNRDDEKNR-DKS 250
E +KK S+ + K+ + D++ EK + E +++ + +E + +KS
Sbjct: 216 KEVKKSKKKSKKVVKKESESEDEAPEKKKTEKRKRSKTSSEESSESEKS 264
Score = 54 (24.1 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 33/177 (18%), Positives = 71/177 (40%)
Query: 726 QNLTNDETNEKGERLEEVTDHKSIKNNELEILNDS---KEVMEAGEVNNVKDNRPASGTM 782
+ L++DE +E+ + EV K K + +++DS K+ E ++V++
Sbjct: 286 KKLSSDEESEESD--VEVLPQKK-KRGAVTLISDSEDEKDQKSESEASDVEEKVSKKKAK 342
Query: 783 GDEPSQLCELDTDMAVEYQARDSTSEIVSQGVPTQVNTLKDSPCAHDDKVTCN-IQLEHM 841
E S+ ++ ++ + E + + + DS + + + E
Sbjct: 343 KQESSESGSDSSEGSITVNRKSKKKEKPEK---KKKGIIMDSSKLQKETIDAERAEKERR 399
Query: 842 SE-ENKSSAKEDLNLEEVNGNSEAFTGASNEMGMQSSAVENG----DNENQDPNQGH 893
E K + LEE +E TG S++ ++S ++ D E++ P + H
Sbjct: 400 KRLEKKQKEFNGIVLEEGEDLTEMLTGTSSQRKLKSVVLDPDSSTVDEESKKPVEVH 456
>GENEDB_PFALCIPARUM|PF10_0217 [details] [associations]
symbol:PF10_0217 "pre-mRNA splicing factor,
putative" species:5833 "Plasmodium falciparum" [GO:0008380 "RNA
splicing" evidence=ISS] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0008380
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AE014185
HSSP:P52298 RefSeq:XP_001347501.1 ProteinModelPortal:Q8IJI0
IntAct:Q8IJI0 MINT:MINT-1545014 PRIDE:Q8IJI0
EnsemblProtists:PF10_0217:mRNA GeneID:810374 KEGG:pfa:PF10_0217
EuPathDB:PlasmoDB:PF3D7_1022400 HOGENOM:HOG000284632 OMA:IRTENRV
ProtClustDB:CLSZ2500844 Uniprot:Q8IJI0
Length = 538
Score = 108 (43.1 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 47/168 (27%), Positives = 73/168 (43%)
Query: 98 KVGSGKKEDNALTKNVDSSRQRDGE-NRDLETKLKEDYVAKSNHRRTLKSEIRLKDRSPG 156
K + + L+K+ + R D E N+ +L D +S+ RR SE R + R
Sbjct: 298 KKNKNESSSDVLSKHSSAYRDSDSEKNKSYRKRLSSDN--RSHSRRRTVSEDRSERRRSL 355
Query: 157 NEKDRGNRGSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQSIVDSRDEATKKHSRDL 216
+E DR N +D +E +S + KS+K RS++ S A K SR+L
Sbjct: 356 SE-DRSN-SRKRNASSDFKRELNSDDDKKSKKK-----RSYSAS----PGSAYKSSSREL 404
Query: 217 TGKDRHADKSGE--KSERESKRKHR-NRDDEKNRDKSAAKKVDLGKGH 261
+D+ D+ E KS + R N +EK D K G+G+
Sbjct: 405 KSQDKSNDRLSESKKSYKSQSASVRYNSTEEKKSDDETVKPKRGGRGN 452
Score = 65 (27.9 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 22/84 (26%), Positives = 39/84 (46%)
Query: 705 SNISTIQACEGNENTASAGVGQNLTNDETNEKGERLEEVTDHKSIKNNELEILNDSKEVM 764
S+ T++ G A G+N N + ++KG + EE D KS+ N+ + +D E
Sbjct: 438 SDDETVKPKRGGRGNAK-NTGKN-KNTKGSKKGAKTEENHDSKSVSNDRNK--SDKSEEK 493
Query: 765 EAGEVNNVKDNRPASGTMGDEPSQ 788
E EV + + +G +P +
Sbjct: 494 EKPEVVSKDEEDKKTGGAEVKPKR 517
>UNIPROTKB|Q8IJI0 [details] [associations]
symbol:PF10_0217 "Pre-mRNA splicing factor, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0008380 "RNA
splicing" evidence=ISS] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0008380
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AE014185
HSSP:P52298 RefSeq:XP_001347501.1 ProteinModelPortal:Q8IJI0
IntAct:Q8IJI0 MINT:MINT-1545014 PRIDE:Q8IJI0
EnsemblProtists:PF10_0217:mRNA GeneID:810374 KEGG:pfa:PF10_0217
EuPathDB:PlasmoDB:PF3D7_1022400 HOGENOM:HOG000284632 OMA:IRTENRV
ProtClustDB:CLSZ2500844 Uniprot:Q8IJI0
Length = 538
Score = 108 (43.1 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 47/168 (27%), Positives = 73/168 (43%)
Query: 98 KVGSGKKEDNALTKNVDSSRQRDGE-NRDLETKLKEDYVAKSNHRRTLKSEIRLKDRSPG 156
K + + L+K+ + R D E N+ +L D +S+ RR SE R + R
Sbjct: 298 KKNKNESSSDVLSKHSSAYRDSDSEKNKSYRKRLSSDN--RSHSRRRTVSEDRSERRRSL 355
Query: 157 NEKDRGNRGSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQSIVDSRDEATKKHSRDL 216
+E DR N +D +E +S + KS+K RS++ S A K SR+L
Sbjct: 356 SE-DRSN-SRKRNASSDFKRELNSDDDKKSKKK-----RSYSAS----PGSAYKSSSREL 404
Query: 217 TGKDRHADKSGE--KSERESKRKHR-NRDDEKNRDKSAAKKVDLGKGH 261
+D+ D+ E KS + R N +EK D K G+G+
Sbjct: 405 KSQDKSNDRLSESKKSYKSQSASVRYNSTEEKKSDDETVKPKRGGRGN 452
Score = 65 (27.9 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 22/84 (26%), Positives = 39/84 (46%)
Query: 705 SNISTIQACEGNENTASAGVGQNLTNDETNEKGERLEEVTDHKSIKNNELEILNDSKEVM 764
S+ T++ G A G+N N + ++KG + EE D KS+ N+ + +D E
Sbjct: 438 SDDETVKPKRGGRGNAK-NTGKN-KNTKGSKKGAKTEENHDSKSVSNDRNK--SDKSEEK 493
Query: 765 EAGEVNNVKDNRPASGTMGDEPSQ 788
E EV + + +G +P +
Sbjct: 494 EKPEVVSKDEEDKKTGGAEVKPKR 517
>TAIR|locus:2132358 [details] [associations]
symbol:AT4G02720 "AT4G02720" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002687 InterPro:IPR009269 PANTHER:PTHR13087
Pfam:PF06047 EMBL:AY075686 EMBL:AY102143 IPI:IPI00531384
RefSeq:NP_192181.2 UniGene:At.34274 IntAct:Q8S9I4 PRIDE:Q8S9I4
EnsemblPlants:AT4G02720.1 GeneID:828193 KEGG:ath:AT4G02720
TAIR:At4g02720 HOGENOM:HOG000243180 InParanoid:Q8S9I4 OMA:PALDNEP
PhylomeDB:Q8S9I4 ProtClustDB:CLSN2714409 Genevestigator:Q8S9I4
Uniprot:Q8S9I4
Length = 422
Score = 108 (43.1 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 38/171 (22%), Positives = 75/171 (43%)
Query: 93 SEEYVKVGSGKKEDNALTKNVDSSRQRDGENRDLETKLKEDYVAKSNHRRTLKSEIRLKD 152
++E G+++DN+ K + E+ L ++ ++ ++S RR K
Sbjct: 78 ADEIQDKNGGERDDNSKGKERKGKSDSESESDGLRSRKRKSKSSRSKRRR--KRSYDSDS 135
Query: 153 RSPGNEKDRGNRGSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQSIVDS-RDEATKK 211
S G+E D + D + + K +S + +S + + RSH + S DE++ +
Sbjct: 136 ESEGSESD--SEEEDRRRRR---KSSSKRKKSRSSRSFRKK-RSHRRKTKYSDSDESSDE 189
Query: 212 HSRDLTGKDRHADKSGEKSERESKRKHRNRDDEKNRDKSAAKKVDLGKGHD 262
S+ + A SGE+ + +SK K R + + + +S +K G D
Sbjct: 190 DSK----AEISASSSGEEEDTKSKSKRRKKSSDSSSKRSKGEKTKSGSDSD 236
Score = 62 (26.9 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 21/106 (19%), Positives = 48/106 (45%)
Query: 714 EGNENTASAGVGQNLTNDETNEKGERLEEVTDHKSIKNNELEI----LNDSKEVMEAGEV 769
+ +++++ G+ + ++ E ++ +++KN ELE+ L KE++E +
Sbjct: 215 KSSDSSSKRSKGEKTKSGSDSDGTEEDSKMQVDETVKNTELELDEEELKKFKEMIELKKK 274
Query: 770 NNVKDNRPASGTMGDEPSQLCE--LDTDMAVEYQARDSTSEIVSQG 813
++ D G +G P E + A+ D+ ++ V QG
Sbjct: 275 SSAVDEEEEEGDVGPMPLPKAEGHISYGGALRPGEGDAIAQYVQQG 320
>UNIPROTKB|E7ETC0 [details] [associations]
symbol:TIAL1 "Nucleolysin TIAR" species:9606 "Homo sapiens"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC012468 HGNC:HGNC:11804
ChiTaRS:TIAL1 IPI:IPI01012546 ProteinModelPortal:E7ETC0 SMR:E7ETC0
Ensembl:ENST00000497671 ArrayExpress:E7ETC0 Bgee:E7ETC0
Uniprot:E7ETC0
Length = 135
Score = 101 (40.6 bits), Expect = 0.00031, P = 0.00031
Identities = 27/116 (23%), Positives = 53/116 (45%)
Query: 553 IFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNEDHEEPCAFIEYVDQLVTPKAIAGLNG 612
+++G +SR ++ +++++ GP K+ +P F+E+ + A+A +NG
Sbjct: 11 LYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAAALAAMNG 70
Query: 613 LKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPKHALPLLKKPTEVLKLKNVFNPEG 668
K+ G+ + A S ++ N FH P + TE +K+ F P G
Sbjct: 71 RKILGKEVKVNWATTPSSQKKDTSNH-FHVFVGDLSPEIT--TE--DIKSAFAPFG 121
>GENEDB_PFALCIPARUM|PF14_0201 [details] [associations]
symbol:PF14_0201 "surface protein, putative,
Pf113" species:5833 "Plasmodium falciparum" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] EMBL:AE014187 GenomeReviews:AE014187_GR
RefSeq:XP_001348374.1 ProteinModelPortal:Q8ILP3 IntAct:Q8ILP3
MINT:MINT-1573265 PRIDE:Q8ILP3 EnsemblProtists:PF14_0201:mRNA
GeneID:811782 KEGG:pfa:PF14_0201 EuPathDB:PlasmoDB:PF3D7_1420700
HOGENOM:HOG000281296 ProtClustDB:CLSZ2446712 Uniprot:Q8ILP3
Length = 969
Score = 128 (50.1 bits), Expect = 0.00033, P = 0.00033
Identities = 48/228 (21%), Positives = 98/228 (42%)
Query: 19 LADSNEGSAARTRPFSFDEIMIRRKTKNLSENIKEDAMDVSNIPGDCTIENVXXXXXXXX 78
L++SN + +T + + + + S+NI+ED D + + +E +
Sbjct: 723 LSESNNENKEKTSDDATHKETQEKSDQEPSQNIQEDNSDEKHAENEENVEQIETDSNVSE 782
Query: 79 XXXXXXXPGVDVHTSEEYVKVGSGKKEDNALTK-NVDSSRQRDGENRDLETKLKEDYVAK 137
+ T E ++ ++ +LTK N S Q + ++ D E KE+ +
Sbjct: 783 EANDENKDNMQTTTDEGTEELQQNDEDAESLTKENSKSEEQENEDSTDAEAIDKEEVETE 842
Query: 138 SNHR-RTLKSEIRLKDRSPGNEKDRGNRGSDTKLKADVTKETSSKPNVKSEKLIPSQGRS 196
+ K E + +D EK+ ++ S+T + VT +K VK E+ + QG
Sbjct: 843 EKGKDEQKKDEQKEQDEEEDGEKENKHKSSETTNET-VTDIEENKNEVKGEEHL--QGSE 899
Query: 197 HNQSIVDSRDEATKKHSRDLTGKDRHADKSG-EKSERESKRKHRNRDD 243
QSI ++ + + K +++ K+ + + + E SE ++ N+ D
Sbjct: 900 --QSI-EASESSQKDETKETEDKEEYVNANDDESSEEDTTPNETNKTD 944
>UNIPROTKB|Q8ILP3 [details] [associations]
symbol:Pf113 "Surface protein, Pf113" species:36329
"Plasmodium falciparum 3D7" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
EMBL:AE014187 GenomeReviews:AE014187_GR RefSeq:XP_001348374.1
ProteinModelPortal:Q8ILP3 IntAct:Q8ILP3 MINT:MINT-1573265
PRIDE:Q8ILP3 EnsemblProtists:PF14_0201:mRNA GeneID:811782
KEGG:pfa:PF14_0201 EuPathDB:PlasmoDB:PF3D7_1420700
HOGENOM:HOG000281296 ProtClustDB:CLSZ2446712 Uniprot:Q8ILP3
Length = 969
Score = 128 (50.1 bits), Expect = 0.00033, P = 0.00033
Identities = 48/228 (21%), Positives = 98/228 (42%)
Query: 19 LADSNEGSAARTRPFSFDEIMIRRKTKNLSENIKEDAMDVSNIPGDCTIENVXXXXXXXX 78
L++SN + +T + + + + S+NI+ED D + + +E +
Sbjct: 723 LSESNNENKEKTSDDATHKETQEKSDQEPSQNIQEDNSDEKHAENEENVEQIETDSNVSE 782
Query: 79 XXXXXXXPGVDVHTSEEYVKVGSGKKEDNALTK-NVDSSRQRDGENRDLETKLKEDYVAK 137
+ T E ++ ++ +LTK N S Q + ++ D E KE+ +
Sbjct: 783 EANDENKDNMQTTTDEGTEELQQNDEDAESLTKENSKSEEQENEDSTDAEAIDKEEVETE 842
Query: 138 SNHR-RTLKSEIRLKDRSPGNEKDRGNRGSDTKLKADVTKETSSKPNVKSEKLIPSQGRS 196
+ K E + +D EK+ ++ S+T + VT +K VK E+ + QG
Sbjct: 843 EKGKDEQKKDEQKEQDEEEDGEKENKHKSSETTNET-VTDIEENKNEVKGEEHL--QGSE 899
Query: 197 HNQSIVDSRDEATKKHSRDLTGKDRHADKSG-EKSERESKRKHRNRDD 243
QSI ++ + + K +++ K+ + + + E SE ++ N+ D
Sbjct: 900 --QSI-EASESSQKDETKETEDKEEYVNANDDESSEEDTTPNETNKTD 944
>UNIPROTKB|Q6UB98 [details] [associations]
symbol:ANKRD12 "Ankyrin repeat domain-containing protein
12" species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR002110 Pfam:PF00023 PRINTS:PR01415
PROSITE:PS50088 SMART:SM00248 GO:GO:0005634 GO:GO:0005737
eggNOG:COG0666 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 EMBL:AF317425 EMBL:AY373757
EMBL:AY533564 EMBL:AL834204 EMBL:AK024808 EMBL:AB020681
IPI:IPI00448465 IPI:IPI00448466 RefSeq:NP_001077094.1
RefSeq:NP_001190985.1 RefSeq:NP_056023.3 UniGene:Hs.464585
ProteinModelPortal:Q6UB98 SMR:Q6UB98 IntAct:Q6UB98 STRING:Q6UB98
PhosphoSite:Q6UB98 DMDM:160358772 PaxDb:Q6UB98 PRIDE:Q6UB98
DNASU:23253 Ensembl:ENST00000262126 Ensembl:ENST00000383440
Ensembl:ENST00000400020 GeneID:23253 KEGG:hsa:23253 UCSC:uc002knv.3
UCSC:uc002knw.3 CTD:23253 GeneCards:GC18P009126 H-InvDB:HIX0014323
HGNC:HGNC:29135 HPA:HPA040705 MIM:610616 neXtProt:NX_Q6UB98
PharmGKB:PA134899860 HOGENOM:HOG000033954 HOVERGEN:HBG106885
InParanoid:Q6UB98 OMA:YSSERAN OrthoDB:EOG4P8FH5 ChiTaRS:ANKRD12
GenomeRNAi:23253 NextBio:44963 ArrayExpress:Q6UB98 Bgee:Q6UB98
CleanEx:HS_ANKRD12 Genevestigator:Q6UB98 Uniprot:Q6UB98
Length = 2062
Score = 129 (50.5 bits), Expect = 0.00035, Sum P(3) = 0.00035
Identities = 45/168 (26%), Positives = 87/168 (51%)
Query: 91 HTSEEYVKVGSGKKEDNALTKNVDSSRQRDGENR--DLETKLKEDYVAKSNHRRTLKSEI 148
H +E+ K G K A+ K D + R+ +R D E KE ++A+S + ++ +
Sbjct: 876 HHTEKCHKEGEKSKNTAAIKKTDDREKSREKMDRKHDKEKPEKERHLAESKEKHLMEKKN 935
Query: 149 RLKDRSPGNEKDRG-NRGSDTKL-KADVTKETSSKPNVKSEKLIPSQGRSHNQSIVDSRD 206
+ D S ++ ++G N+ D +L K + +++ S N+ + K I + +S SIVD +
Sbjct: 936 KQSDNSEYSKSEKGKNKEKDRELDKKEKSRDKESI-NITNSKHIQEEKKS---SIVDG-N 990
Query: 207 EATKKHSRDLTGKDRHADKSGEKSE-RESKRKHRNRDDEKNRDKSAAK 253
+A +H + L+ K++ D+ + + +E +K ++ D K RDK K
Sbjct: 991 KA--QHEKPLSLKEKTKDEPLKTPDGKEKDKKDKDIDRYKERDKHKDK 1036
Score = 56 (24.8 bits), Expect = 0.00035, Sum P(3) = 0.00035
Identities = 20/70 (28%), Positives = 34/70 (48%)
Query: 394 DVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPL-AGISVSASLAKLNVSMD 452
D +P V SNV + + SN H ++ P ++ K + A ++ + A +N MD
Sbjct: 1341 DTSPSPKPEVFSNVPERDLSNVSNIHSSFATSPTGASNSKYVSADRNLIKNTAPVNTVMD 1400
Query: 453 S-VQLTQSNR 461
S V L S++
Sbjct: 1401 SPVHLEPSSQ 1410
Score = 53 (23.7 bits), Expect = 0.00068, Sum P(2) = 0.00068
Identities = 15/62 (24%), Positives = 30/62 (48%)
Query: 714 EGNENTASAGVGQNLTNDETNEKGERLEEVTDHKSIKNNELEILNDSKEVMEAGEVNNVK 773
E ++T + + LT +++E + + K +N + + D+K VM G+ + V
Sbjct: 1124 EKTKHTPTESKNKELTRSKSSEVTDAYTKEKQPKDAVSNRSQSV-DTKNVMTLGKSSFVS 1182
Query: 774 DN 775
DN
Sbjct: 1183 DN 1184
Score = 48 (22.0 bits), Expect = 0.00035, Sum P(3) = 0.00035
Identities = 19/88 (21%), Positives = 39/88 (44%)
Query: 732 ETNEKGERLEEVTDHKSIKNNELEILNDSKEVMEAGEVNNVKDNRPASGTMGDEPSQLCE 791
E N + ++ E + +N + N SK+++ + + + KD+ +S G +L E
Sbjct: 1719 EENAEDDKTENQIPQRMTRNKANTMANQSKQILASCTLLSEKDSE-SSSPRGR--IRLTE 1775
Query: 792 LDTDMAVEYQARDSTSEIVSQGVPTQVN 819
D D + + + S + P QV+
Sbjct: 1776 -DDDPQIHHPRKRKVSRVPQ---PVQVS 1799
>TAIR|locus:2027513 [details] [associations]
symbol:AT1G56660 "AT1G56660" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] EMBL:CP002684 EMBL:AC009323
IPI:IPI00548934 PIR:C96608 RefSeq:NP_176058.1 UniGene:At.48313
PRIDE:Q9FXB5 EnsemblPlants:AT1G56660.1 GeneID:842121
KEGG:ath:AT1G56660 TAIR:At1g56660 OMA:KKHEDVS
ProtClustDB:CLSN2912802 Genevestigator:Q9FXB5 Uniprot:Q9FXB5
Length = 522
Score = 124 (48.7 bits), Expect = 0.00092, Sum P(2) = 0.00092
Identities = 57/236 (24%), Positives = 94/236 (39%)
Query: 41 RRKTKNLSENIKEDAMDVSNIPGDCTIENVXXXXXXXXXXXXXXXPGVDVHTSEEYVKVG 100
++K KN+ +KED D G + V V V E+ K G
Sbjct: 63 KKKGKNVDSEVKEDKDDDKKKDG----KMVSKKHEEGHGDLEVKESDVKVEEHEKEHKKG 118
Query: 101 SGKKEDNALTKNVDSSRQRDGENRDL----ETKLKEDYVAKSNHRRTLKSEIRLKDRSPG 156
KK + L + + ++++ + +D E K D K K E+ +D
Sbjct: 119 KEKKHEE-LEEEKEGKKKKNKKEKDESGPEEKNKKADKEKKHEDVSQEKEELEEEDGKKN 177
Query: 157 NEKDRGNRGSDTKLKADVTKETSSKPNVKS--EKLIPSQGRSHNQSIVDSRDEATKK-HS 213
+K++ G++ K K KE K KS +K + + + ++ DE KK H
Sbjct: 178 KKKEKDESGTEEKKKKP-KKEKKQKEESKSNEDKKVKGKKEKGEKGDLEKEDEEKKKEHD 236
Query: 214 ---RDLTGKDRHADKSGEKSERESKRKHRNRDDEKN-RDKSAAK-----KVDLGKG 260
+++ KD +K EK E ++ K + D EK +D+S K K GKG
Sbjct: 237 ETDQEMKEKDSKKNKKKEKDESCAEEKKKKPDKEKKEKDESTEKEDKKLKGKKGKG 292
Score = 103 (41.3 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 36/154 (23%), Positives = 73/154 (47%)
Query: 110 TKNVDSSRQRDGENRDLETKLKEDYVAKSNHRRTLKSEIRLKDRSPGNEKDRGNRGSDTK 169
T+ +D + GEN ++E ++K + K ++ +S + K EK +G + D++
Sbjct: 19 TQELDPKEK--GENVEVEMEVKAKSIEKVKAKKDEESSGKSKK---DKEKKKG-KNVDSE 72
Query: 170 LKADVTKETSSKPNVKSEKLIPSQGRSHNQSIVDSRDEATKKHSRD-LTGKDRHADKSGE 228
+K D K+ K + K +G H V D ++H ++ GK++ ++ E
Sbjct: 73 VKED--KDDDKKKDGKMVSKKHEEG--HGDLEVKESDVKVEEHEKEHKKGKEKKHEELEE 128
Query: 229 KSERESKRKHRNRDDEKNRDKSAAKKVDLGKGHD 262
+ E + K+ + +D+ +K+ KK D K H+
Sbjct: 129 EKEGKKKKNKKEKDESGPEEKN--KKADKEKKHE 160
Score = 69 (29.3 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 33/130 (25%), Positives = 53/130 (40%)
Query: 734 NEKGERLEEVTDHKSIKNNELEILNDSKEVMEAGEVNNVKDNRPASGTMGDEPSQLCELD 793
N+K E+ E T+ K K + E KE ++ E VK + G GD + D
Sbjct: 177 NKKKEKDESGTEEKK-KKPKKE--KKQKEESKSNEDKKVKGKKE-KGEKGDLEKE----D 228
Query: 794 TDMAVEYQARDSTSEIVSQGVPTQVNTLKDSPCAHDDKVTCNIQLEHMSEENKSSAKEDL 853
+ E+ D E+ + KD CA + K + + E+++S+ KED
Sbjct: 229 EEKKKEHDETDQ--EMKEKDSKKNKKKEKDESCAEEKKKKPD---KEKKEKDESTEKEDK 283
Query: 854 NLEEVNGNSE 863
L+ G E
Sbjct: 284 KLKGKKGKGE 293
Score = 43 (20.2 bits), Expect = 0.00092, Sum P(2) = 0.00092
Identities = 14/51 (27%), Positives = 28/51 (54%)
Query: 726 QNLTNDETNEKGERLEEVTDHKSIKNNELEILNDSKEV-MEAGEVNNVKDN 775
+N ++ +EKGE+ +V + K K N LE S+++ +E E +++
Sbjct: 362 KNKKKEKKSEKGEK--DVKEDKK-KENPLETEVMSRDIKLEEPEAEKKEED 409
>GENEDB_PFALCIPARUM|PF13_0191 [details] [associations]
symbol:PF13_0191 "hypothetical protein,
conserved" species:5833 "Plasmodium falciparum" [GO:0020011
"apicoplast" evidence=RCA] EMBL:AL844509 InterPro:IPR024781
Pfam:PF12948 RefSeq:XP_001350074.1 ProteinModelPortal:Q8IDY5
EnsemblProtists:PF13_0191:mRNA GeneID:814161 KEGG:pfa:PF13_0191
EuPathDB:PlasmoDB:PF3D7_1334300 OMA:ANEDNVE Uniprot:Q8IDY5
Length = 459
Score = 89 (36.4 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 43/198 (21%), Positives = 88/198 (44%)
Query: 714 EGNENTASAGVGQNLTNDETNEKGERLEE--VTD--------HKSIKNNELEILNDSKEV 763
E EN + +N NDE + E EE VTD +K+++NN + N +K++
Sbjct: 212 ENEENNDNETNEENEDNDENEDNDENEEEIEVTDVEFVGQSTNKNVRNNMIR--NSNKDI 269
Query: 764 MEAGEVNNVKDNRPASGTMGDEPSQLCELDTDMAVEYQARDSTSEIVSQGVPTQVNTLKD 823
+ + +++K +S +G+ P++L +T + +++ S+ ++V+ K+
Sbjct: 270 KSSSQNSSIKAQN-SSTKIGNTPTKLSTQNTKS--NSTSNQLITQLQSEKSSSKVDNNKN 326
Query: 824 SP--CAHDDKVTCNIQLEHMSEENKSSAKEDLNLEEVNGNSE---AFTGASNEMGMQSSA 878
+ + DK+ C+ L + E K + ++N + N + FT NE +
Sbjct: 327 NTNEIKYMDKL-CDDVLTELKE--KDNVDNNMNHSKYNNLKKEFSTFTMNQNECDLIKKL 383
Query: 879 VENGDNENQDPNQGHIFE 896
+ EN + + I E
Sbjct: 384 IITFSQENVEMKRDSIKE 401
Score = 82 (33.9 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 30/150 (20%), Positives = 59/150 (39%)
Query: 103 KKEDNALTKNVDSSRQRDGENRDLETKLKEDYVAKSNHRRTLKSEIRLKDRSPGNEKDRG 162
KKED+ + D D + D E +E+ + R + E D E ++
Sbjct: 89 KKEDDDDEEETDEDDDEDSDEDDEE---QEELNVEPKEREDEQEET--DDEQKETEDEQK 143
Query: 163 NRGSDTKLKADVTKETSS--KPNVKSEKLIPSQGRSHNQSIVDSRDEATKKHS--RDLTG 218
+ K D KET K +K + + ++ DEA++++S +
Sbjct: 144 ETEDEQKETEDEQKETEDEQKETEDEQKESDDEQKETEDEQKETEDEASEEYSDNEEDDE 203
Query: 219 KDRHADKSGEKSERESKRKHRNRDDEKNRD 248
+D D+ + +++ N D+++N D
Sbjct: 204 EDEEDDEEENEENNDNETNEENEDNDENED 233
>UNIPROTKB|Q8IDY5 [details] [associations]
symbol:PF13_0191 "Uncharacterized protein" species:36329
"Plasmodium falciparum 3D7" [GO:0020011 "apicoplast" evidence=RCA]
EMBL:AL844509 InterPro:IPR024781 Pfam:PF12948 RefSeq:XP_001350074.1
ProteinModelPortal:Q8IDY5 EnsemblProtists:PF13_0191:mRNA
GeneID:814161 KEGG:pfa:PF13_0191 EuPathDB:PlasmoDB:PF3D7_1334300
OMA:ANEDNVE Uniprot:Q8IDY5
Length = 459
Score = 89 (36.4 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 43/198 (21%), Positives = 88/198 (44%)
Query: 714 EGNENTASAGVGQNLTNDETNEKGERLEE--VTD--------HKSIKNNELEILNDSKEV 763
E EN + +N NDE + E EE VTD +K+++NN + N +K++
Sbjct: 212 ENEENNDNETNEENEDNDENEDNDENEEEIEVTDVEFVGQSTNKNVRNNMIR--NSNKDI 269
Query: 764 MEAGEVNNVKDNRPASGTMGDEPSQLCELDTDMAVEYQARDSTSEIVSQGVPTQVNTLKD 823
+ + +++K +S +G+ P++L +T + +++ S+ ++V+ K+
Sbjct: 270 KSSSQNSSIKAQN-SSTKIGNTPTKLSTQNTKS--NSTSNQLITQLQSEKSSSKVDNNKN 326
Query: 824 SP--CAHDDKVTCNIQLEHMSEENKSSAKEDLNLEEVNGNSE---AFTGASNEMGMQSSA 878
+ + DK+ C+ L + E K + ++N + N + FT NE +
Sbjct: 327 NTNEIKYMDKL-CDDVLTELKE--KDNVDNNMNHSKYNNLKKEFSTFTMNQNECDLIKKL 383
Query: 879 VENGDNENQDPNQGHIFE 896
+ EN + + I E
Sbjct: 384 IITFSQENVEMKRDSIKE 401
Score = 82 (33.9 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 30/150 (20%), Positives = 59/150 (39%)
Query: 103 KKEDNALTKNVDSSRQRDGENRDLETKLKEDYVAKSNHRRTLKSEIRLKDRSPGNEKDRG 162
KKED+ + D D + D E +E+ + R + E D E ++
Sbjct: 89 KKEDDDDEEETDEDDDEDSDEDDEE---QEELNVEPKEREDEQEET--DDEQKETEDEQK 143
Query: 163 NRGSDTKLKADVTKETSS--KPNVKSEKLIPSQGRSHNQSIVDSRDEATKKHS--RDLTG 218
+ K D KET K +K + + ++ DEA++++S +
Sbjct: 144 ETEDEQKETEDEQKETEDEQKETEDEQKESDDEQKETEDEQKETEDEASEEYSDNEEDDE 203
Query: 219 KDRHADKSGEKSERESKRKHRNRDDEKNRD 248
+D D+ + +++ N D+++N D
Sbjct: 204 EDEEDDEEENEENNDNETNEENEDNDENED 233
>UNIPROTKB|A8E658 [details] [associations]
symbol:PPIG "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006457 "protein folding" evidence=IEA]
[GO:0003755 "peptidyl-prolyl cis-trans isomerase activity"
evidence=IEA] InterPro:IPR002130 InterPro:IPR020892 Pfam:PF00160
PRINTS:PR00153 PROSITE:PS00170 PROSITE:PS50072 GO:GO:0005634
GO:GO:0005737 GO:GO:0006457 eggNOG:COG0652 GO:GO:0003755
SUPFAM:SSF50891 GO:GO:0000413 GeneTree:ENSGT00550000074595
KO:K09566 CTD:9360 HOVERGEN:HBG048162 OMA:NKKFDHE OrthoDB:EOG43FGWT
HOGENOM:HOG000115659 EMBL:DAAA02004279 EMBL:DAAA02004278
EMBL:BC153852 IPI:IPI00714529 RefSeq:NP_001103277.1
UniGene:Bt.21987 SMR:A8E658 Ensembl:ENSBTAT00000040072
GeneID:783720 KEGG:bta:783720 InParanoid:A8E658 NextBio:20926266
Uniprot:A8E658
Length = 753
Score = 126 (49.4 bits), Expect = 0.00039, P = 0.00039
Identities = 45/179 (25%), Positives = 82/179 (45%)
Query: 92 TSEEYVKVGSGKKEDNALTKNVDSSRQRDGENRDLETKLKED-YVAKSNHRRTLKSEIRL 150
T +V +K + K V + E K+D Y K R KS +
Sbjct: 407 TDHRHVSESPNRKSEKE--KKVKDHKSNSKEREIRRNSEKDDKYKNKVKKRAKSKSRSKS 464
Query: 151 KDRSPGNEKD-RGNRGSDTKLKADVTKETSSKPNVKSEKLIPSQGRSH--NQSIVDSRDE 207
K++S E+D + NR + ++K+ +KE + NVK ++ S+G+ ++S S+
Sbjct: 465 KEKSKSKERDTKHNRHEEKRMKSR-SKERDHE-NVKEKEKPDSKGKEQERSRSKEKSKQL 522
Query: 208 ATKKHSRDLT---GKDRHAD-KSGEKSERESKRKHRNRDDEKNRDKSAAKKVDLGKGHD 262
+K + D KDR A +S E+ +SK + +R E++R + +++V + HD
Sbjct: 523 ESKNNEHDHNKSKDKDRRAQSRSRERDMTKSKHSYNSRTKERSRSRDRSRRVR-SRSHD 580
>FB|FBgn0039215 [details] [associations]
symbol:CG6695 species:7227 "Drosophila melanogaster"
[GO:0003729 "mRNA binding" evidence=ISS] EMBL:AE014297
GeneTree:ENSGT00700000104518 KO:K13168 OMA:HQLYLEE
InterPro:IPR019147 Pfam:PF09750 UniGene:Dm.10895 GeneID:42937
KEGG:dme:Dmel_CG6695 FlyBase:FBgn0039215 GenomeRNAi:42937
NextBio:831379 EMBL:AY118441 RefSeq:NP_651276.2 IntAct:Q9VC54
MINT:MINT-1654882 EnsemblMetazoa:FBtr0089916 UCSC:CG6695-RA
InParanoid:Q9VC54 Uniprot:Q9VC54
Length = 961
Score = 127 (49.8 bits), Expect = 0.00041, P = 0.00041
Identities = 40/143 (27%), Positives = 66/143 (46%)
Query: 125 DLETKLKEDYVAKSNHRRTLKSEIRLKDRSPGNEKDRGNRGSDTKLKADVTKETSSKPN- 183
D E+ E +AKS+ RR+ +S + RSP E R S + T+ S K N
Sbjct: 796 DAESVASESQLAKSSTRRS-RSRSESRRRSPPPETQHSRRSSSRTERRRRTRTPSPKYNR 854
Query: 184 -----VKSEKLIPSQGRSHNQSIVDSRDEATKKHSRDLTGKDRHADKSGEKS-ERESKRK 237
+S + + RSH++ SRD + R + + R D+S E++ ERE R+
Sbjct: 855 RQRSRSRSGSRVERKRRSHSRRRSGSRDRRRSRSRRSQSRRRRQRDRSIERNREREQYRQ 914
Query: 238 HRNRDDEKNRDKSAAKKVDLGKG 260
+ +E+ R + ++ D G G
Sbjct: 915 QHQQQNERLRGRDRDREADYGHG 937
>DICTYBASE|DDB_G0287625 [details] [associations]
symbol:DDB_G0287625 species:44689 "Dictyostelium
discoideum" [GO:0005615 "extracellular space" evidence=IDA]
dictyBase:DDB_G0287625 GO:GO:0005615 EMBL:AAFI02000103
RefSeq:XP_637128.1 EnsemblProtists:DDB0187557 GeneID:8626223
KEGG:ddi:DDB_G0287625 eggNOG:NOG285146 OMA:ESTERNE Uniprot:Q54K36
Length = 981
Score = 96 (38.9 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 36/154 (23%), Positives = 69/154 (44%)
Query: 116 SRQRDGENRDLETKLKEDYVAKSNHRRTLKSEIRLKDRSPGNEKDRGNRGSDTKLKADVT 175
SR R +R ++ + +KS RR+ + RS + + R + ++ ++D
Sbjct: 232 SRSRRSRSRSSRSRSRSRSKSKSKSRRSRSRSRSRRSRSRSDSRSRSDSRGRSRSRSDSR 291
Query: 176 KETS--SKPNVKSEKLIPSQGRS---HNQSIVDSRDEA---TKKHSRDLTGKDRHADKSG 227
K + +K +SE +P + S H S +R + T+ SR T + R + G
Sbjct: 292 KNSKRQTKSRSRSESRLPDKNYSSKRHQNSRKRNRSYSRSRTRSWSRSRT-RSRSRRRYG 350
Query: 228 EKSERESKR-----KHRNRDDEKNRDKSAAKKVD 256
++ R +R + R RD E++RD++ + D
Sbjct: 351 GRTFRSPRRSRDDSRDRGRDRERDRDRNRCRDRD 384
Score = 96 (38.9 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 44/214 (20%), Positives = 75/214 (35%)
Query: 40 IRRKTKNLSENIKEDAMDVSNIPGDC-TIENVXXXXXXXXXXXXXXXPGVDVHTSEEYVK 98
I N S NI + ++S I +I N TS +
Sbjct: 125 INNSLSNNSSNINNSSNNISYIGNSSNSINNNDNKLSRSRSRSRGSAKTTSSLTSSKRSL 184
Query: 99 VGSGKKEDNALTKNVDSSRQRDGEN--RDLETKLKEDYVAKSNHRRTLKSEIRLKDRSPG 156
+ D + T++ SR R L S R +S R + RS
Sbjct: 185 DSRNRNRDRSYTRSRSRSRSRSYSRGFSSLSRSRSRSRSISSRSRSRSRSR-RSRSRS-S 242
Query: 157 NEKDRGNRGSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQSIVDSRDEATKKHSRDL 216
+ R S +K + ++ S + +S+ S R ++S DSR + ++
Sbjct: 243 RSRSRSRSKSKSKSRRSRSRSRSRRSRSRSDSRSRSDSRGRSRSRSDSRKNSKRQTKSRS 302
Query: 217 TGKDRHADKSGEKSERESKRKHRNRDDEKNRDKS 250
+ R DK+ ++ RK RNR ++R +S
Sbjct: 303 RSESRLPDKNYSSKRHQNSRK-RNRSYSRSRTRS 335
Score = 82 (33.9 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 31/142 (21%), Positives = 59/142 (41%)
Query: 716 NENTASAGVGQNLTNDETNEKGERLEEVTDHKSIKNNELEILNDSKEVMEAGEVNNVKDN 775
N N + N N+ N ++ + KNN + S+E E G +N V++
Sbjct: 778 NNNPNNNNPNNNNNNNNNNNNNNNNNNNNNNNNNKNNNNNNNSFSEEEEEEGSLNQVRNI 837
Query: 776 RPASGTMGDEPSQLCELDTDMAVEYQARDSTSEIVSQGVPTQVNTLKDSPCAHDDKVTCN 835
P G ++ S L E + + Q D+ S +SQ + T + K + ++D +
Sbjct: 838 SPKIGKYNEDISFL-EKEWNRLGNVQ-NDTNSSPISQQLSTSSSPFKSTGGSNDGNSSDI 895
Query: 836 IQLEHMSEENKSSAKEDLNLEE 857
I +E ++ K++ +E
Sbjct: 896 IMMESNNDIINDGGKKNRVFKE 917
Score = 81 (33.6 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 40/209 (19%), Positives = 82/209 (39%)
Query: 698 NVVKYGD----SNISTI---QACEGN--ENTASAGVGQNLTNDETNEKGERLEEVTDHKS 748
N+ KY D +NI+ I N +N+ + N N+ N ++ +
Sbjct: 472 NITKYSDMDIDNNINNIINSNNINNNNIKNSNNINNSNNNNNNNNNNNNNNNNNNNNNNN 531
Query: 749 IKNNELEILNDSKEVMEAGEVNNVKDNRPASGTMGDEPSQLC-ELDTDMAVEYQARDSTS 807
NN N++ G VN V + + P + +LD+ + + Q +
Sbjct: 532 NNNNNNNNNNNNSHNNTNGNVNGVSKTTSSPASDNSTPENISTDLDSPLLKKNQQLNLIK 591
Query: 808 EIVSQGVPTQVNTLKDSPCAHDD--KVTCN-IQLEHMSEENKSSAKEDLNLEEVNGNSEA 864
E ++ + T+ +++ +S +D K C+ + E+ + EN+ + E+ N N
Sbjct: 592 EQTNK-LKTE-DSIDESNNNGNDRFKTKCSSTENENKNRENEKNNSENSKNNPNNNNPNN 649
Query: 865 FTGASNEMGMQSSAVENGDNENQDPNQGH 893
+N ++ N +N N + N +
Sbjct: 650 NNNNNNNNNNNNNNNNNNNNNNNNNNNNN 678
>ZFIN|ZDB-GENE-081015-2 [details] [associations]
symbol:rpgrb "retinitis pigmentosa GTPase regulator
b" species:7955 "Danio rerio" [GO:0060287 "epithelial cilium
movement involved in determination of left/right asymmetry"
evidence=IMP] [GO:0060271 "cilium morphogenesis" evidence=IMP]
[GO:0010842 "retina layer formation" evidence=IMP] [GO:0060041
"retina development in camera-type eye" evidence=IMP] [GO:0007018
"microtubule-based movement" evidence=IMP] INTERPRO:IPR000408
Pfam:PF00415 ZFIN:ZDB-GENE-081015-2 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0010842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0060271 GO:GO:0060287
GeneTree:ENSGT00700000104160 EMBL:CR450831 IPI:IPI00798788
RefSeq:XP_685964.5 UniGene:Dr.100975 Ensembl:ENSDART00000088624
GeneID:557752 KEGG:dre:557752 CTD:557752 NextBio:20882140
Bgee:F1QM29 Uniprot:F1QM29
Length = 1413
Score = 94 (38.1 bits), Expect = 0.00047, Sum P(2) = 0.00046
Identities = 40/185 (21%), Positives = 76/185 (41%)
Query: 714 EGNENTASAGVGQNLTNDETNE-----KGERLEEVTDHKSIKNNELEILNDSKEVMEAGE 768
E N++ + Q + E +E + ER EE + + + E E+ ++++E E GE
Sbjct: 1165 ESNDDEDKSETSQEEESGEESEGNSESRSERSEEDDEDEESEKEESEVESEAEED-ETGE 1223
Query: 769 VNNVKDNRPASGTMGDEPSQLCELD-TDMAVEYQARDSTSEIVSQGVPTQVNTLKDSPCA 827
+ +D+ + DE E + + E D + E S + + +
Sbjct: 1224 NTSEEDDEEQESSSEDEEKSESEAEGEEEESEGDQEDESDEETSDKDEEEEESENEEEEE 1283
Query: 828 HDDKVTCNIQLEHMSEENKSSAKEDLNLEEVNGNSE-AFTGASNEMGMQSSAVENGDNEN 886
+ KV + E S E + + +E+ EE ++E A E Q ENGD+E
Sbjct: 1284 EESKVE---EEEEESNEEEENEEEEAEEEEPGEDTEEAEDEEGEEEDTQEEEQENGDDEE 1340
Query: 887 QDPNQ 891
++ +
Sbjct: 1341 EEEEE 1345
Score = 87 (35.7 bits), Expect = 0.00047, Sum P(2) = 0.00046
Identities = 31/174 (17%), Positives = 73/174 (41%)
Query: 90 VHTSEEYVKVGSGKKEDNALTKNVDSSRQRDGENRDLETKLKEDYVAKSNHRRTLKSEIR 149
+ S E + K ++ +TK + +R+ E + ++++ + S+ + E +
Sbjct: 991 IKDSSEEEESEEEKTVNDTVTKASSENEEREEEEKSNDSEVNDTMTKHSSEDEEKEKEEK 1050
Query: 150 LKDRSPGN---EKDRGNRGSDTKLKA-DVTKETSSKPNVKSEKLIPSQGRSHNQSI-VDS 204
D S + E++ G K + D +E S +VK+ + + S S
Sbjct: 1051 SSDSSNASSEDEEEEEKNGDSAKASSEDEEEEEKSGSSVKASSEDEEEEEENGDSFKASS 1110
Query: 205 RDEATKKHSRDLTGKDRHADKSGEKS--ERESKRKHRNRDDEKNRDKSAAKKVD 256
++E+ + + KS ++ + ES+ + N D+E+ + +++A D
Sbjct: 1111 KEESGDSANASNVNSEEEEQKSKSEATDDLESEEEEDNEDNEEEKSETSASTED 1164
Score = 86 (35.3 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 36/164 (21%), Positives = 65/164 (39%)
Query: 102 GKKEDNALTKNVDSSRQRDGENR----DLETKLKEDYVAKSNHRRTLKSEIR---LKDRS 154
G ++D+ + K DSS + + E D TK + + ++ SE+ K S
Sbjct: 983 GDEDDDTMIK--DSSEEEESEEEKTVNDTVTKASSENEEREEEEKSNDSEVNDTMTKHSS 1040
Query: 155 PGNEKDRGNRGSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQSIVDSRDEATKKHSR 214
EK++ + SD+ + +E K N S K S ++ + + K S
Sbjct: 1041 EDEEKEKEEKSSDSSNASSEDEEEEEK-NGDSAK-----ASSEDEEEEEKSGSSVKASSE 1094
Query: 215 DLTGKDRHAD--KSGEKSERESKRKHRNRDDEKNRDKSAAKKVD 256
D ++ + D K+ K E N + E+ KS ++ D
Sbjct: 1095 DEEEEEENGDSFKASSKEESGDSANASNVNSEEEEQKSKSEATD 1138
Score = 80 (33.2 bits), Expect = 0.00087, Sum P(3) = 0.00087
Identities = 31/105 (29%), Positives = 48/105 (45%)
Query: 137 KSNHRRTLKSE---IRLKDRSPGNEKDRG---NRGSDTKLKADVTKETSSKPNVKSEKLI 190
KS RR E I L+ R PG++ +G +R LK T+ S VK +
Sbjct: 578 KSPKRRGHDKENVLIALEGRKPGSKTGKGMDKSRAGSKSLKLKHTELMESSDKVKKQSTE 637
Query: 191 PSQGRSHNQSIVDSRDEATKKHSRDLTGKDRHADKSGE-KSERES 234
+Q NQ + R + T K +++ TGK + D E KS+ ++
Sbjct: 638 KTQ---QNQEVEVQRSKGTSKPTQEGTGKAKAKDHQLEVKSQLQN 679
Score = 51 (23.0 bits), Expect = 0.00087, Sum P(3) = 0.00087
Identities = 25/95 (26%), Positives = 34/95 (35%)
Query: 386 PEKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQKPLAGISVSASLA 445
P+ + K D ET + S V S ++ S + + STT P +G SA
Sbjct: 713 PKVQKVKGDTKIAETEN-KSFVPQSKKSGSEKDLKSSKTTKEISTTSHPTSGKDTSAKTK 771
Query: 446 KLNVSMDSVQLTQSNRPMRRLCVENLPLSASEKAL 480
K V+ M V S SE AL
Sbjct: 772 KSRAEQRQVEDKLKKTKMVPTVVSEAA-SVSESAL 805
>GENEDB_PFALCIPARUM|PFL0625c [details] [associations]
symbol:PFL0625c "eukaryotictranslation
initiation factor 3 subunit 10, putative" species:5833 "Plasmodium
falciparum" [GO:0003743 "translation initiation factor activity"
evidence=ISS] [GO:0005852 "eukaryotic translation initiation factor
3 complex" evidence=ISS] [GO:0006446 "regulation of translational
initiation" evidence=ISS] InterPro:IPR000717 Pfam:PF01399
GO:GO:0006446 Gene3D:1.10.10.10 InterPro:IPR011991 EMBL:AE014188
GO:GO:0003743 GO:GO:0005852 KO:K03254 RefSeq:XP_001350534.1
ProteinModelPortal:Q8I5S6 IntAct:Q8I5S6 MINT:MINT-1551532
PRIDE:Q8I5S6 EnsemblProtists:PFL0625c:mRNA GeneID:811178
KEGG:pfa:PFL0625c EuPathDB:PlasmoDB:PF3D7_1212700
HOGENOM:HOG000280986 OMA:RENDISK ProtClustDB:CLSZ2500953
Uniprot:Q8I5S6
Length = 1377
Score = 116 (45.9 bits), Expect = 0.00049, Sum P(2) = 0.00049
Identities = 41/164 (25%), Positives = 81/164 (49%)
Query: 103 KKEDNALTKNVDSSRQRDGENRDLETKLKEDYVAKSNHRRTLKSEIRLKDRSPGNEK-DR 161
++E+ L K + R++ E R KL+E ++K+ R L+ ++++K + + + +R
Sbjct: 970 EEEEERLLKE-EMERKKKEEARK---KLEE--ISKAQRERDLEMDLQMKRKKEESRRSER 1023
Query: 162 GNRGSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQSIVDSRDEATKKHSRDLTGKDR 221
+R S + D+T K S+ S R + RD + + RD +G+DR
Sbjct: 1024 SHRKSS--IDDDLTWRRGDKGG--SQNGDDSYRRHDDHHDGTHRDRSEMRDRRDWSGRDR 1079
Query: 222 HADKSGEKSERESKRKHR---NRDDEKNRDKSAAKKVDLGKGHD 262
D+ ++ +R+ R+HR +RD E++RD+ + D + D
Sbjct: 1080 DRDRERDR-DRDRDREHRRDRDRDRERDRDRDRERDRDRDRERD 1122
Score = 64 (27.6 bits), Expect = 0.00049, Sum P(2) = 0.00049
Identities = 36/156 (23%), Positives = 64/156 (41%)
Query: 745 DHKSIKNNELEILNDSKEVMEAGEVNNVK----DNRPASGTMGDEPSQLCELDTDMAVEY 800
DHK ++++L+ DS+ +G+ N K D +GT + L D +
Sbjct: 1223 DHKKDRDDKLD--RDSRRRERSGKPENEKKRENDISKRNGTTEERTKNAWNLKEDD--DS 1278
Query: 801 QARDSTSEIVSQGVPTQVNTLKDSPCAHDDKVTCNIQLEHMSEENKSSAKEDLNLEEVNG 860
+A+ TSE ++ N + D+ +K + + ++++S+K N E NG
Sbjct: 1279 KAKHETSEENTKSWRNN-NKVIDNEIEKAEKYKDGEKKDGEKNKDENSSKNKENDELANG 1337
Query: 861 NSEAFTGASNEMGMQSSAVENGDNENQDPNQGHIFE 896
N E NE +N D E D +F+
Sbjct: 1338 NEE------NE---NDEVKKNDDEEASDGGDFTVFK 1364
>UNIPROTKB|Q8I5S6 [details] [associations]
symbol:PFL0625c "Eukaryotic translation initiation factor 3
subunit 10, putative" species:36329 "Plasmodium falciparum 3D7"
[GO:0003743 "translation initiation factor activity" evidence=ISS]
[GO:0005852 "eukaryotic translation initiation factor 3 complex"
evidence=ISS] [GO:0006446 "regulation of translational initiation"
evidence=ISS] InterPro:IPR000717 Pfam:PF01399 GO:GO:0006446
Gene3D:1.10.10.10 InterPro:IPR011991 EMBL:AE014188 GO:GO:0003743
GO:GO:0005852 KO:K03254 RefSeq:XP_001350534.1
ProteinModelPortal:Q8I5S6 IntAct:Q8I5S6 MINT:MINT-1551532
PRIDE:Q8I5S6 EnsemblProtists:PFL0625c:mRNA GeneID:811178
KEGG:pfa:PFL0625c EuPathDB:PlasmoDB:PF3D7_1212700
HOGENOM:HOG000280986 OMA:RENDISK ProtClustDB:CLSZ2500953
Uniprot:Q8I5S6
Length = 1377
Score = 116 (45.9 bits), Expect = 0.00049, Sum P(2) = 0.00049
Identities = 41/164 (25%), Positives = 81/164 (49%)
Query: 103 KKEDNALTKNVDSSRQRDGENRDLETKLKEDYVAKSNHRRTLKSEIRLKDRSPGNEK-DR 161
++E+ L K + R++ E R KL+E ++K+ R L+ ++++K + + + +R
Sbjct: 970 EEEEERLLKE-EMERKKKEEARK---KLEE--ISKAQRERDLEMDLQMKRKKEESRRSER 1023
Query: 162 GNRGSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQSIVDSRDEATKKHSRDLTGKDR 221
+R S + D+T K S+ S R + RD + + RD +G+DR
Sbjct: 1024 SHRKSS--IDDDLTWRRGDKGG--SQNGDDSYRRHDDHHDGTHRDRSEMRDRRDWSGRDR 1079
Query: 222 HADKSGEKSERESKRKHR---NRDDEKNRDKSAAKKVDLGKGHD 262
D+ ++ +R+ R+HR +RD E++RD+ + D + D
Sbjct: 1080 DRDRERDR-DRDRDREHRRDRDRDRERDRDRDRERDRDRDRERD 1122
Score = 64 (27.6 bits), Expect = 0.00049, Sum P(2) = 0.00049
Identities = 36/156 (23%), Positives = 64/156 (41%)
Query: 745 DHKSIKNNELEILNDSKEVMEAGEVNNVK----DNRPASGTMGDEPSQLCELDTDMAVEY 800
DHK ++++L+ DS+ +G+ N K D +GT + L D +
Sbjct: 1223 DHKKDRDDKLD--RDSRRRERSGKPENEKKRENDISKRNGTTEERTKNAWNLKEDD--DS 1278
Query: 801 QARDSTSEIVSQGVPTQVNTLKDSPCAHDDKVTCNIQLEHMSEENKSSAKEDLNLEEVNG 860
+A+ TSE ++ N + D+ +K + + ++++S+K N E NG
Sbjct: 1279 KAKHETSEENTKSWRNN-NKVIDNEIEKAEKYKDGEKKDGEKNKDENSSKNKENDELANG 1337
Query: 861 NSEAFTGASNEMGMQSSAVENGDNENQDPNQGHIFE 896
N E NE +N D E D +F+
Sbjct: 1338 NEE------NE---NDEVKKNDDEEASDGGDFTVFK 1364
>UNIPROTKB|E1C591 [details] [associations]
symbol:PPIG "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003755 "peptidyl-prolyl cis-trans isomerase activity"
evidence=IEA] [GO:0006457 "protein folding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR002130 InterPro:IPR020892 Pfam:PF00160
PRINTS:PR00153 PROSITE:PS00170 PROSITE:PS50072 GO:GO:0005634
GO:GO:0005737 GO:GO:0006457 GO:GO:0003755 SUPFAM:SSF50891
GO:GO:0000413 GeneTree:ENSGT00550000074595 OMA:NKKFDHE
EMBL:AADN02020271 IPI:IPI00602148 Ensembl:ENSGALT00000015996
Uniprot:E1C591
Length = 747
Score = 125 (49.1 bits), Expect = 0.00050, P = 0.00050
Identities = 67/328 (20%), Positives = 119/328 (36%)
Query: 111 KNVDSSRQRDGENRDLETKLKEDYVAKSNHRRTLKSEIRLKDRSPGNEKDRGNRGSDTKL 170
K D + + +R E + K+D+ + S R T ++ + + K RG S +K
Sbjct: 402 KASDHRQVSESPSRRGEKEKKKDHKSSSKDRETRRNLEKDDKHNRSKTKKRGKSRSHSKS 461
Query: 171 KADV-TKETSSKPNVKSEKLIPSQGRSHNQSIVDSRDEATKKHSRDLTGKDRHADKSGEK 229
+ +KE SK + EK RS ++ +D +KH D G+D+ +S E+
Sbjct: 462 REKSRSKERDSKHSRHDEKR-----RSRSKERDREKDREKEKHY-DSRGRDKERSRSKER 515
Query: 230 SERESKRKHRNRDDEKNRDKSAAKKVDLGKGHDLXXXXXXXXXXXXXXXXXXXXXXXXXX 289
S R R + RD K++D+ K + H
Sbjct: 516 SRRAGSRSNE-RDHRKSKDREKHKSRSREREHARGKHSSSSRTRERSKSRDRGRRGRSRS 574
Query: 290 XXXXXXXXXXXXXXXXPRAQKRTSYYDREHEGLPSHSTKISSGRQHSDIDSSRVTGNGLS 349
+++R S RE G P + R+ + S R +
Sbjct: 575 RDRDRSRSKEYSRNRDRESRRRRSR-SRERRGTPDRYRGRENRRRRNSRSSEREESQSRN 633
Query: 350 GH-YRRHDGSTSGLGGYSPRKRRTEAAA-KTPSPINRSPEKKSAKWDVAPVETYSVPSNV 407
Y + +S S +R+ + + ++ SP + +K S D +P ++ PS+
Sbjct: 634 RERYSNRESRSSYKRNDSESQRKRHSKSHESSSPESSKGKKSSRDQDRSP-DSKKRPSSK 692
Query: 408 HTSNQAAS--SNAHEMVSSDPVTSTTQK 433
+++ S SN E S QK
Sbjct: 693 ERESKSYSHRSNEKEKTRSSAEKEINQK 720
>UNIPROTKB|I3LC61 [details] [associations]
symbol:CYLC2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005200 "structural constituent of cytoskeleton"
evidence=IEA] InterPro:IPR026189 GO:GO:0005200 PANTHER:PTHR16742
OMA:KKPSSTD GeneTree:ENSGT00690000102102 EMBL:CU571436
Ensembl:ENSSSCT00000023377 Uniprot:I3LC61
Length = 388
Score = 121 (47.7 bits), Expect = 0.00051, P = 0.00051
Identities = 42/155 (27%), Positives = 75/155 (48%)
Query: 103 KKEDNALTKNVDSSRQRDGENRDLETKLKEDYVA-KSNHRRTLKSEIRLKDRSPGNEKDR 161
KK+ K +S+ + +GE D + K+D K +SE D ++KD+
Sbjct: 174 KKDKKGPKKGKESATESEGEKGDAKKDSKKDKKGPKKGKESATESEGEKGDAKKDSKKDK 233
Query: 162 -G-NRGSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQSIVDSRDEATKKHSRDLTGK 219
G +G ++ +++ K + K + K +K P +G+ +S +S E KK ++D GK
Sbjct: 234 KGPKKGKESATESEGEKGDAKKDS-KKDKKGPKKGK---ESATESEGE--KKDAKDKEGK 287
Query: 220 DRHADKSGEKSERESKRKHRNRDDEKNRDKSAAKK 254
+ + K G+K + ESK K ++ E + K KK
Sbjct: 288 -KDSKKPGDKGD-ESKDKKDSKKKESKKGKKDEKK 320
>UNIPROTKB|Q14093 [details] [associations]
symbol:CYLC2 "Cylicin-2" species:9606 "Homo sapiens"
[GO:0005200 "structural constituent of cytoskeleton" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0033150 "cytoskeletal calyx"
evidence=IEA] InterPro:IPR026189 GO:GO:0007275 GO:GO:0030154
GO:GO:0005200 GO:GO:0007283 GO:GO:0033150 PANTHER:PTHR16742
OrthoDB:EOG40VVPZ CTD:1539 eggNOG:NOG73087 EMBL:Z46788
EMBL:AK313349 EMBL:AL449304 EMBL:BC114547 IPI:IPI00028539
PIR:I37271 RefSeq:NP_001331.1 UniGene:Hs.3232
ProteinModelPortal:Q14093 STRING:Q14093 PhosphoSite:Q14093
DMDM:2498278 PaxDb:Q14093 PRIDE:Q14093 Ensembl:ENST00000374798
Ensembl:ENST00000487798 GeneID:1539 KEGG:hsa:1539 UCSC:uc004bbs.2
GeneCards:GC09P105757 HGNC:HGNC:2583 MIM:604035 neXtProt:NX_Q14093
PharmGKB:PA27083 HOGENOM:HOG000112131 OMA:KKPSSTD ChiTaRS:CYLC2
GenomeRNAi:1539 NextBio:6373 Bgee:Q14093 CleanEx:HS_CYLC2
Genevestigator:Q14093 GermOnline:ENSG00000155833 Uniprot:Q14093
Length = 348
Score = 120 (47.3 bits), Expect = 0.00054, P = 0.00054
Identities = 48/175 (27%), Positives = 79/175 (45%)
Query: 87 GVDVHTSEEYVKVGS---GKKEDNALTKNVDSSRQRDGENRDLETKLKEDYVAKSNHRRT 143
G D T E K G+ KK+ K DS+ + +GE E K+ K + ++
Sbjct: 171 GKDSATESEDEKGGAKKDNKKDKKDSNKGKDSATESEGEKGGTE---KDSKKGKKDSKKG 227
Query: 144 LKSEIRLKDRSPGNEKDRGNRGSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQSIVD 203
S I L+ +KD + D K D +K+ +K + K K + + + D
Sbjct: 228 KDSAIELQAVKADEKKDEDGK-KDAN-KGDESKD--AKKDAKEIKKGKKDKKKPSSTDSD 283
Query: 204 SRDEATKKHSRDLTGKD--RHADKSGEKSERESKR---KHRNRDDEKNRDKSAAK 253
S+D+ K+ +D T KD + A K EK +SK+ K+ +D +K+ K+A K
Sbjct: 284 SKDDVKKESKKDAT-KDAKKVAKKDTEKESADSKKDAKKNAKKDAKKDAKKNAKK 337
>WB|WBGene00016360 [details] [associations]
symbol:C33G8.2 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0007067 "mitosis" evidence=IMP] GO:GO:0009792
GO:GO:0007067 GeneTree:ENSGT00690000102070 EMBL:FO080765 PIR:T34137
RefSeq:NP_504775.1 UniGene:Cel.30633 ProteinModelPortal:Q18401
EnsemblMetazoa:C33G8.2 GeneID:183174 KEGG:cel:CELE_C33G8.2
UCSC:C33G8.2 CTD:183174 WormBase:C33G8.2 eggNOG:NOG145231
InParanoid:Q18401 OMA:DDVDKDM NextBio:920178 Uniprot:Q18401
Length = 390
Score = 127 (49.8 bits), Expect = 0.00057, Sum P(2) = 0.00057
Identities = 38/155 (24%), Positives = 71/155 (45%)
Query: 103 KKEDNALTKNVDSSRQRDGENRDLETKLKEDYVAKSNHRRTLKSEIRLK-DRSPGNEKDR 161
K+E+ K D ++ D E + + K K+D + K + + K D + EK++
Sbjct: 138 KEEEEKDKKKKDKKKEEDDEEEEQKDKKKKDEKNDDDDEEDKKKDKKKKKDDNDEEEKEK 197
Query: 162 GNRGSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQSIVDSRDEATKKHSRDLTGKDR 221
+ D K D ++ + K K +K + +++ D + + KK +D KD
Sbjct: 198 DKKKKDKKKDDDDDEDENDKKKDKKKK---KDDKDDDENEDDKKKD--KKKKKDDKEKD- 251
Query: 222 HADKSGEKSERESKRKHRNRDDEKNRDKSAAKKVD 256
D E+ +++ K K +N DDE+++ K KK D
Sbjct: 252 --DDDEEEKDKKKKDKKKNDDDEEDKKKDKKKKKD 284
Score = 38 (18.4 bits), Expect = 0.00057, Sum P(2) = 0.00057
Identities = 9/46 (19%), Positives = 20/46 (43%)
Query: 843 EENKSSAKEDLNLEEVNGNSEAFTGASNEMGMQSSAVENGDNENQD 888
++ K K+D E+ + + ++M E+ D E++D
Sbjct: 336 DKKKKDDKDDDEDEDKDDKKKKKDDVDDDMKKDKKKKEDDDKEDED 381
>WB|WBGene00021913 [details] [associations]
symbol:cec-8 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] InterPro:IPR000953
PROSITE:PS50013 SMART:SM00298 Pfam:PF00385 GO:GO:0005634
GO:GO:0009792 InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR023780
GeneTree:ENSGT00690000102102 EMBL:FO081109 RefSeq:NP_497198.1
ProteinModelPortal:Q95XW8 SMR:Q95XW8 DIP:DIP-25228N IntAct:Q95XW8
MINT:MINT-1109877 STRING:Q95XW8 PaxDb:Q95XW8
EnsemblMetazoa:Y55B1BR.3 GeneID:175202 KEGG:cel:CELE_Y55B1BR.3
UCSC:Y55B1BR.3 CTD:175202 WormBase:Y55B1BR.3 eggNOG:NOG255798
InParanoid:Q95XW8 OMA:PRANNEN NextBio:887184 Uniprot:Q95XW8
Length = 679
Score = 123 (48.4 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 41/164 (25%), Positives = 72/164 (43%)
Query: 94 EEYVKVGSGKKEDNALTKNVDSSRQRDGENRDLETKLKEDYVAKSNHRRTLKSEIRLKDR 153
EE VK KK+ + + K D E E+ K+ + + +++ E ++
Sbjct: 375 EEVVK----KKKSSKINKRKAKESSSDEEEEVEESPKKKTKSPRKSSKKSAAKEESEEES 430
Query: 154 SPGNEKDRGNRGSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQSIVDS---RDEATK 210
S E++ + K+K+ K++S KP K E PS + + +S +D+ +
Sbjct: 431 SDNEEEEEVDYSPKKKVKSP--KKSSKKPAAKVESEEPSDNEEEEEEVEESPIKKDKTPR 488
Query: 211 KHSRDLTGKDRHADKSG--EKSERESKRKHRNRDDEKNRDKSAA 252
K+SR K + SG E+ E E K + + K+ KSAA
Sbjct: 489 KYSRKSAAKVESTESSGNEEEEEVEESPKKKGKTPRKSSKKSAA 532
Score = 49 (22.3 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 19/79 (24%), Positives = 29/79 (36%)
Query: 717 ENTASAGVGQNLTNDETNEKGERLEEVTDHKSIKNNELEILNDSKEVMEAGEVNNVKDNR 776
E+ S G + +E+ +K + + KS E E +D +E +A E N
Sbjct: 600 ESEESFGNEEEEEVEESPKKKGKTPRKSSKKSAAKEESEESSDDEEEEQAEETNGSHTES 659
Query: 777 PASGTMGDEPSQLCELDTD 795
P DE D D
Sbjct: 660 PTKSKT-DESDNSTSSDED 677
>UNIPROTKB|F1SSA8 [details] [associations]
symbol:CYLC2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005200 "structural constituent of cytoskeleton"
evidence=IEA] InterPro:IPR026189 GO:GO:0005200 PANTHER:PTHR16742
GeneTree:ENSGT00690000102102 EMBL:CU571436
Ensembl:ENSSSCT00000005944 Uniprot:F1SSA8
Length = 364
Score = 120 (47.3 bits), Expect = 0.00059, P = 0.00059
Identities = 46/160 (28%), Positives = 72/160 (45%)
Query: 103 KKEDNALTKNVDSSRQRDGENRDLETKLKEDYVA-KSNHRRTLKSEIRLKD-RSPGNEKD 160
KK+ K +S+ + +GE D + K+D K +SE KD + +KD
Sbjct: 202 KKDKKGPKKGKESATESEGEKGDAKKDSKKDKKGPKKGKESATESEGEKKDAKDKEGKKD 261
Query: 161 R---GNRGSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQSIVDSRDEATKKHSRDLT 217
G++G ++K K D +K+ SK K EK PS+ S +S+D K +D
Sbjct: 262 SKKPGDKGDESKDKKD-SKKKESKKGKKDEKK-PSEADS------ESKDTPKKDAKKDAK 313
Query: 218 GKDRHAD-KSGEKSERESKRKHRNRDDEKNRDKSAAKKVD 256
KD D K G + E +K +D +K+ K +VD
Sbjct: 314 -KDAKKDAKKGTEPESADAKKDAKKDAKKDAKKDKDVEVD 352
>DICTYBASE|DDB_G0279317 [details] [associations]
symbol:DDB_G0279317 "unknown" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] InterPro:IPR019134
Pfam:PF09732 SMART:SM01050 dictyBase:DDB_G0279317 EMBL:AAFI02000030
OMA:NADNPFG InterPro:IPR018816 Pfam:PF10312 eggNOG:NOG290728
RefSeq:XP_641790.1 EnsemblProtists:DDB0233566 GeneID:8621987
KEGG:ddi:DDB_G0279317 InParanoid:Q54WY7 ProtClustDB:CLSZ2729091
Uniprot:Q54WY7
Length = 727
Score = 112 (44.5 bits), Expect = 0.00061, Sum P(2) = 0.00061
Identities = 43/166 (25%), Positives = 75/166 (45%)
Query: 102 GKKEDNALTKNVDSSRQRDGE----NRDLETKLKED-YVA--KSNHRRTLKSEIRLKDRS 154
GK D ++ D R RDGE +RD + + D Y K N R + R K+R
Sbjct: 24 GKDRDRERDRDRDRERDRDGERDRMDRDRDRSEERDRYRGRDKENQRDRERDRDRSKER- 82
Query: 155 PGNEKDRGNRGSDTKLKADVTKETSSKPNVKS-EKLIPSQGRSHNQSIVDSRDEAT---K 210
N+KDR +R + D+ ++ + +S +K S + ++S SRD+ + K
Sbjct: 83 --NKKDR-DRSEERDRSRDIDRDRKYRDRSRSRDKKKSSSEKDRSKSRSRSRDKKSSSYK 139
Query: 211 KHSRDLTGKDRHADKSG--EKSERESKRKHRNRDDEKNRDKSAAKK 254
++ +D + D +D S + S+ E KRK + + +K+
Sbjct: 140 RNRKDYSDSDSDSDSSSGSDDSDYERKRKSSSSTSTSSTSNKESKE 185
Score = 61 (26.5 bits), Expect = 0.00061, Sum P(2) = 0.00061
Identities = 22/111 (19%), Positives = 46/111 (41%)
Query: 783 GDEPSQLCELDTDMAVEYQARDSTSEIVSQGVPTQVNTLKDSPCAHDDKVTCNIQLEHMS 842
G +LC+L+ D+ + ++ + + + + + K S ++ T N++L+
Sbjct: 461 GKSYKELCDLEVDIIKKLESGSAMNVEYWETLLKHLKMYKASSFL-SERFTENLKLKLSE 519
Query: 843 EENKSSAKEDLNLEEVNGNSEAFTGASNEMGMQSSAVENGDNENQDPNQGH 893
E + K N + NSE +N +S N +N N + N +
Sbjct: 520 METEKYLKGVANDMNLPFNSENTDDNNNNQSNTTSTSTNNNNNNNNNNSNY 570
>UNIPROTKB|J9NUC9 [details] [associations]
symbol:HMGN5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0031492 "nucleosomal DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0000785
"chromatin" evidence=IEA] InterPro:IPR000079 Pfam:PF01101
PRINTS:PR00925 PROSITE:PS00355 SMART:SM00527 GO:GO:0005634
GO:GO:0000785 GO:GO:0031492 GeneTree:ENSGT00690000102194
EMBL:AAEX03026575 Ensembl:ENSCAFT00000044595 OMA:DEMEENT
Uniprot:J9NUC9
Length = 287
Score = 118 (46.6 bits), Expect = 0.00061, P = 0.00061
Identities = 51/234 (21%), Positives = 93/234 (39%)
Query: 41 RRKTKN--LSENIKEDAMDVSNIPGDCTIENVXXXXXXXXXXXXXXXPGVDVHTSEEYVK 98
+ KTKN + +N I G+C EN + +E+ +
Sbjct: 44 KMKTKNDMMEKNTDTTESKQEVIEGECDAEN-GETKITEPQTPEKLLEEMKEEKNEDVEE 102
Query: 99 VGSGKKEDNALTKNVDSSRQRDG--ENRDLETKLKED---YVAKSNHRRTLKSEIRLKDR 153
G KE A + + ++G E++ T+ +ED Y K K E K +
Sbjct: 103 EGIEMKEAVATAFSSSEGKDQEGYVEDQKKRTENREDEKEYKDKKGKGDRKKDEDG-KGK 161
Query: 154 SPGNEKDRGNR-GSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQSIVD---SRDEAT 209
G E+++ + G + K K +KE K K ++ G+ + + + +D
Sbjct: 162 GDGKEEEKKEKNGEEGKGKGANSKEEEEKEKKKGDEKEGEDGKGKGEDVKEFENEKDTGE 221
Query: 210 KKHSRDLT-GKDRHADKSGEKSERESKRKHRNRDDEKNRDKSAAKKVDLGKGHD 262
KK D +D DK G++ +R +K + N+ K +++ A++ G G D
Sbjct: 222 KKQGDDRKENEDGRVDKDGKEEKRGNKEEVGNKKGGKEKEEDGAEENGNGDGKD 275
>UNIPROTKB|B5DE93 [details] [associations]
symbol:cdk12 "Cyclin-dependent kinase 12" species:8364
"Xenopus (Silurana) tropicalis" [GO:0008353 "RNA polymerase II
carboxy-terminal domain kinase activity" evidence=ISS] [GO:0008380
"RNA splicing" evidence=ISS] [GO:0016607 "nuclear speck"
evidence=ISS] [GO:0019908 "nuclear cyclin-dependent protein kinase
holoenzyme complex" evidence=ISS] [GO:0043405 "regulation of MAP
kinase activity" evidence=ISS] [GO:0070816 "phosphorylation of RNA
polymerase II C-terminal domain" evidence=ISS] InterPro:IPR000719
InterPro:IPR002290 InterPro:IPR008271 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 GO:GO:0005524 GO:GO:0008380
GO:GO:0016607 eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0006397
GO:GO:0007049 GO:GO:0019908 GO:GO:0004693 GO:GO:0008353
GO:GO:0070816 CTD:51755 KO:K08819 GO:GO:0043405 HOVERGEN:HBG050852
EMBL:BC168577 RefSeq:NP_001128283.1 UniGene:Str.6962
ProteinModelPortal:B5DE93 PRIDE:B5DE93 GeneID:100038049
KEGG:xtr:100038049 Xenbase:XB-GENE-493308 Uniprot:B5DE93
Length = 1239
Score = 117 (46.2 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 39/145 (26%), Positives = 68/145 (46%)
Query: 116 SRQRDGENRDLETKLKEDYVAKSNHRRTLKSEIRLKDRSPGNEKDRGNRGSDTKLKADVT 175
++Q EN + K D + KS HR K RLK+ + + ++ + T+ + V
Sbjct: 81 AKQERRENDERRPSEKSDKMHKSRHRHQHK---RLKEATRTKQVEKERKPEKTQ-EVMVN 136
Query: 176 KETSSKPNVKS--EKLIPSQ---GRSHNQSIVDSRDEATK-KHSRDLTGKDRHADKSGEK 229
K SSK + S ++ Q GR+ S DSR + K K R+ K H ++S
Sbjct: 137 KVPSSKDKIISSAKRTADEQEEHGRTSKSSSKDSRSKMHKDKSRREREMKSGHKERSKSH 196
Query: 230 SERESKRKHRNRDDEKNRDKSAAKK 254
+R+S ++++ D K + +S +K
Sbjct: 197 RKRDSSKRYKTSDSPKRKGRSPRRK 221
Score = 61 (26.5 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 56/260 (21%), Positives = 104/260 (40%)
Query: 317 REHEGLPSHSTKISSGRQHSDIDSS--RVTGNG-LSGHYRRHDGSTSGLGGYSPRKRRTE 373
R++ G P S G D D S RV +G + YR++ S S Y +
Sbjct: 220 RKYGGSPKQDDSHSEGSCGQDYDDSPSRVHASGNFNETYRKNMDSPS----YK-EPAAYQ 274
Query: 374 AAAKTPSPINR-----SP-EKKSAKWDVAPVETYS--VPSNVHTSNQAASSNAHEMVSSD 425
++A++PSP +R SP ++S+ ++ +YS PS ++ + +S
Sbjct: 275 SSARSPSPYSRKQRSVSPYRRRSSSYERGS-GSYSGRSPSPYVRRRSSSPFVSRRSLSRS 333
Query: 426 PVTSTTQKPLAGISVSASLAKLNVSMDSVQLTQSNRPMRRLCVENLPLSASEKALMEFLN 485
P + K + + + + S Q +QS + LPL++S A E
Sbjct: 334 PAPRKSAKSRSRSPLYPRKSSSS-SRSKKQKSQSRSRHSSISPARLPLNSSLGA--E--- 387
Query: 486 NFLLSSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRP 545
LS + + + G + KG + + D+ A D + +LK+++P
Sbjct: 388 ---LSRKKKEIAAAAAAAG---RESKGSPLILKKESGDSRVASALD-LKKATKVLKLEKP 440
Query: 546 KEFVEVAIFIGGISRTLSSK 565
E+ ++T+S+K
Sbjct: 441 VSEPEMVTATSSETKTISAK 460
>RGD|1587653 [details] [associations]
symbol:LOC688526 "similar to ribonucleic acid binding protein
S1" species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 RGD:1587653 GO:GO:0005634
GO:GO:0005737 GO:GO:0000184 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003730 GeneTree:ENSGT00700000104336 IPI:IPI00560964
Ensembl:ENSRNOT00000037439 Uniprot:F1M6U2
Length = 301
Score = 75 (31.5 bits), Expect = 0.00062, Sum P(3) = 0.00062
Identities = 18/64 (28%), Positives = 34/64 (53%)
Query: 192 SQGRSHNQSIVDSRDEATKKHSRDLTGKDRHADKSGEKSERESKRKHRNRDD-EKNRDKS 250
S G+S +S++ ++ K +R + + D+S EKS+ SK K ++ EK+R +
Sbjct: 3 SSGKSEKKSLLGVKENNIKSSTR-VPSPTKRKDRSDEKSKDRSKDKRATKESSEKDRGRD 61
Query: 251 AAKK 254
+K
Sbjct: 62 KTRK 65
Score = 68 (29.0 bits), Expect = 0.00062, Sum P(3) = 0.00062
Identities = 20/78 (25%), Positives = 38/78 (48%)
Query: 553 IFIGGISRTLSSKMVMEIVCAFGPLKAYHFEVNE--DH-EEPCAFIEYVDQLVTPKAIAG 609
+ I ++R ++ +MEI +G +K V H + ++E+ + K +
Sbjct: 159 VHIERLTRNVTKDHIMEIFSTYGKIKMIDMPVERILPHLSKGYVYVEFENPDEAEKTLKH 218
Query: 610 LNGLKVGGQVLTAVQAVL 627
+NG ++ GQ +TA AVL
Sbjct: 219 MNGGQIDGQEITAT-AVL 235
Score = 61 (26.5 bits), Expect = 0.00062, Sum P(3) = 0.00062
Identities = 24/62 (38%), Positives = 28/62 (45%)
Query: 321 GLPSHSTKISSGRQHSDIDSSRVTGNGLSGHYRRHDGSTSGLGGYSPRKR-RTEAAAKTP 379
G S S SG QH I SS +G+ S RRHD S P KR E ++P
Sbjct: 97 GSSSFSASSRSGSQH--IRSSS-SGSP-SPSRRRHDNRRSSHSKSKPPKRDEKERKRRSP 152
Query: 380 SP 381
SP
Sbjct: 153 SP 154
>CGD|CAL0003874 [details] [associations]
symbol:PGA55 species:5476 "Candida albicans" [GO:0009986
"cell surface" evidence=ISS] [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
CGD:CAL0003874 GO:GO:0009986 EMBL:AACQ01000152 RefSeq:XP_712591.1
GeneID:3645784 KEGG:cal:CaO19.207 Uniprot:Q59SG9
Length = 1404
Score = 127 (49.8 bits), Expect = 0.00065, P = 0.00065
Identities = 127/764 (16%), Positives = 262/764 (34%)
Query: 135 VAKSNHRRTLKSEIRLKDRSPGNEKDRGNRGSDTKLKADVTKETSSKPNVKSEKLIPSQG 194
V S+ SEI S + + S+ +++ +S + S+ S+
Sbjct: 111 VISSSSEEASSSEIT--SSSEISSSSEVSSSSEVLSSSEIISSSSEVVSSSSKVSSSSEA 168
Query: 195 RSHNQSIVDSRDEATKKHSRDLTGKDRHADKSGE----KSERESKRKHRNRDDEKNRDKS 250
S + I+ S E S+ +T S E SE S + + E +
Sbjct: 169 TSSSSEIISSSSEVVSSSSQ-VTSSSEVVSSSSEVVSSSSEVSSSSEVVSSSSEVSSSSE 227
Query: 251 AAKKVDLGKGHDLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRAQK 310
+ ++ +
Sbjct: 228 VSSSSEVSSSSQVTSSSEIVSSSSEVSSSSSEVVSSSSEVSSSSEVVSSSSEVSSSSEVS 287
Query: 311 RTSYYDREHEGLPSHSTKISSGRQHSDIDSSRVTGNGLSGHYRRHDGSTSGLGGYSPRKR 370
+S E S S+++SS Q I SS V + + S+S S
Sbjct: 288 SSSEVSSSSE--VSSSSEVSSSSQV--ISSSEVVSSSSEVVSSSSEVSSSSEVSSSSEVV 343
Query: 371 RTEAAAKTPSPINRSPEKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTST 430
+ + + S ++ S E S+ + E S S V +S+ S++ E+ SS V S+
Sbjct: 344 SSSSEVSSSSEVSSSSEVSSSSQVTSSSEIVSSSSEVSSSSSEVVSSSSEVSSSSEVVSS 403
Query: 431 TQKPLAGISVSASLAKLNVSMDSVQLTQSNRPMRRLCVENLPLSASE-KALMEFLNNFLL 489
+ + + VS+S ++++ S + ++ + + + + S+SE + E +++
Sbjct: 404 SSEVSSSSEVSSS-SEVSSSSEVSSSSEVSSSSQVISSSEVVSSSSEVSSSSEVVSSSSE 462
Query: 490 SSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFV 549
S V S + Q V + +S++ S S ++ V
Sbjct: 463 VSSSSEVSSSSE-VSSSSQVTSSSEIVSSSSEVSSSSSEVVSSSSEVSSSSEVVSSSSEV 521
Query: 550 EVAIFIGGISRTLSSKMVM---EIVCAFGPLKAYHFEVNEDHEEPCAFIEYVD---QLVT 603
+ + S SS V+ EIV + + + EV E + E V ++ +
Sbjct: 522 SSSSEVSSSSEVSSSSQVISSSEIVSSSSEVSSSSSEVVSSSSEVSSSSEVVSSSSEVSS 581
Query: 604 PKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPKHALPLLKKPTEVLKLKNV 663
++ + + QV+++ + V S + +S + + + +EV V
Sbjct: 582 SSEVSSSSEVSSSSQVISSSEVVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSEVSSSSEV 641
Query: 664 FNPEGFXXXXXXXXXXXXXXXXXX--CARFGSVKSVNVVKYGDSNISTIQACEGNENTAS 721
+ + V S + V S +S+ + +S
Sbjct: 642 SSSSQVTSSSEIVSSSSEVSSSSSEVVSSSSEVSSSSEVVSSSSEVSSSSEVSSSSEVSS 701
Query: 722 AG--VGQNLTNDETNEKGERLEEVTDHKSIKNNELEILNDSKEVMEAGEVNNVKD-NRPA 778
+ + + ++E EV+ + ++ E+ + S EV + EV++ + +
Sbjct: 702 SSQVISSSEVVSSSSEVVSSSSEVSSSSEVSSSS-EV-SSSSEVSSSSEVSSSSEVTSSS 759
Query: 779 SGTMGDEPSQLCELDTDMAVEYQARDSTSEIVSQG--VPTQVNTLKDSPCAHDDKVTCNI 836
S + S ++++ QA S+SEI+S V + S C +
Sbjct: 760 SEIISSSSSSEVTSSSEVSSSSQATSSSSEIISSSSKVSSSSEITSSSECISSTSEVNSS 819
Query: 837 QLEHMSEENKSSAKEDLNLEEVNGNSEAFTGASNEMGMQSSAVE 880
E +S + SS + E ++ +SEA + +S + SS+ E
Sbjct: 820 SSEVVSSSSASSEVVSSSTECISSSSEAISSSSQ---VTSSSTE 860
>UNIPROTKB|Q59SG9 [details] [associations]
symbol:PGA55 "Flocculin-like protein" species:237561
"Candida albicans SC5314" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0009986 "cell surface" evidence=ISS] CGD:CAL0003874
GO:GO:0009986 EMBL:AACQ01000152 RefSeq:XP_712591.1 GeneID:3645784
KEGG:cal:CaO19.207 Uniprot:Q59SG9
Length = 1404
Score = 127 (49.8 bits), Expect = 0.00065, P = 0.00065
Identities = 127/764 (16%), Positives = 262/764 (34%)
Query: 135 VAKSNHRRTLKSEIRLKDRSPGNEKDRGNRGSDTKLKADVTKETSSKPNVKSEKLIPSQG 194
V S+ SEI S + + S+ +++ +S + S+ S+
Sbjct: 111 VISSSSEEASSSEIT--SSSEISSSSEVSSSSEVLSSSEIISSSSEVVSSSSKVSSSSEA 168
Query: 195 RSHNQSIVDSRDEATKKHSRDLTGKDRHADKSGE----KSERESKRKHRNRDDEKNRDKS 250
S + I+ S E S+ +T S E SE S + + E +
Sbjct: 169 TSSSSEIISSSSEVVSSSSQ-VTSSSEVVSSSSEVVSSSSEVSSSSEVVSSSSEVSSSSE 227
Query: 251 AAKKVDLGKGHDLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRAQK 310
+ ++ +
Sbjct: 228 VSSSSEVSSSSQVTSSSEIVSSSSEVSSSSSEVVSSSSEVSSSSEVVSSSSEVSSSSEVS 287
Query: 311 RTSYYDREHEGLPSHSTKISSGRQHSDIDSSRVTGNGLSGHYRRHDGSTSGLGGYSPRKR 370
+S E S S+++SS Q I SS V + + S+S S
Sbjct: 288 SSSEVSSSSE--VSSSSEVSSSSQV--ISSSEVVSSSSEVVSSSSEVSSSSEVSSSSEVV 343
Query: 371 RTEAAAKTPSPINRSPEKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTST 430
+ + + S ++ S E S+ + E S S V +S+ S++ E+ SS V S+
Sbjct: 344 SSSSEVSSSSEVSSSSEVSSSSQVTSSSEIVSSSSEVSSSSSEVVSSSSEVSSSSEVVSS 403
Query: 431 TQKPLAGISVSASLAKLNVSMDSVQLTQSNRPMRRLCVENLPLSASE-KALMEFLNNFLL 489
+ + + VS+S ++++ S + ++ + + + + S+SE + E +++
Sbjct: 404 SSEVSSSSEVSSS-SEVSSSSEVSSSSEVSSSSQVISSSEVVSSSSEVSSSSEVVSSSSE 462
Query: 490 SSGVQHVHGSLPCIGCVIQREKGQAFVEFLTAEDASAALCCDGCSFSGSILKIKRPKEFV 549
S V S + Q V + +S++ S S ++ V
Sbjct: 463 VSSSSEVSSSSE-VSSSSQVTSSSEIVSSSSEVSSSSSEVVSSSSEVSSSSEVVSSSSEV 521
Query: 550 EVAIFIGGISRTLSSKMVM---EIVCAFGPLKAYHFEVNEDHEEPCAFIEYVD---QLVT 603
+ + S SS V+ EIV + + + EV E + E V ++ +
Sbjct: 522 SSSSEVSSSSEVSSSSQVISSSEIVSSSSEVSSSSSEVVSSSSEVSSSSEVVSSSSEVSS 581
Query: 604 PKAIAGLNGLKVGGQVLTAVQAVLDGSIMDNSGNPPFHGIPKHALPLLKKPTEVLKLKNV 663
++ + + QV+++ + V S + +S + + + +EV V
Sbjct: 582 SSEVSSSSEVSSSSQVISSSEVVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSEVSSSSEV 641
Query: 664 FNPEGFXXXXXXXXXXXXXXXXXX--CARFGSVKSVNVVKYGDSNISTIQACEGNENTAS 721
+ + V S + V S +S+ + +S
Sbjct: 642 SSSSQVTSSSEIVSSSSEVSSSSSEVVSSSSEVSSSSEVVSSSSEVSSSSEVSSSSEVSS 701
Query: 722 AG--VGQNLTNDETNEKGERLEEVTDHKSIKNNELEILNDSKEVMEAGEVNNVKD-NRPA 778
+ + + ++E EV+ + ++ E+ + S EV + EV++ + +
Sbjct: 702 SSQVISSSEVVSSSSEVVSSSSEVSSSSEVSSSS-EV-SSSSEVSSSSEVSSSSEVTSSS 759
Query: 779 SGTMGDEPSQLCELDTDMAVEYQARDSTSEIVSQG--VPTQVNTLKDSPCAHDDKVTCNI 836
S + S ++++ QA S+SEI+S V + S C +
Sbjct: 760 SEIISSSSSSEVTSSSEVSSSSQATSSSSEIISSSSKVSSSSEITSSSECISSTSEVNSS 819
Query: 837 QLEHMSEENKSSAKEDLNLEEVNGNSEAFTGASNEMGMQSSAVE 880
E +S + SS + E ++ +SEA + +S + SS+ E
Sbjct: 820 SSEVVSSSSASSEVVSSSTECISSSSEAISSSSQ---VTSSSTE 860
>GENEDB_PFALCIPARUM|PF10_0135 [details] [associations]
symbol:PF10_0135 "hypothetical protein"
species:5833 "Plasmodium falciparum" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] EMBL:AE014185 RefSeq:XP_001347420.2
ProteinModelPortal:Q8IJQ7 IntAct:Q8IJQ7 MINT:MINT-1560502
EnsemblProtists:PF10_0135:mRNA GeneID:810293 KEGG:pfa:PF10_0135
EuPathDB:PlasmoDB:PF3D7_1013800 ProtClustDB:CLSZ2500831
Uniprot:Q8IJQ7
Length = 486
Score = 115 (45.5 bits), Expect = 0.00067, Sum P(2) = 0.00067
Identities = 39/162 (24%), Positives = 73/162 (45%)
Query: 104 KEDNALTKNVDSSRQRDGENRDLETKLKEDYVAKSNHRRTLKSEIRLKDRSPGNEKDRGN 163
K+D + TKN +Q G+N+D E +D + ++S+ LK++S K +
Sbjct: 137 KDDKSKTKN---EKQDKGKNKD-EFDNDDDLIDDEEVDDDVESD-DLKNKSKNKSKSK-- 189
Query: 164 RGSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQSIVD--SRDEATKKHSRDLTGKDR 221
D K K D K+ ++ + + N + ++E KK D D
Sbjct: 190 --QDEKKKNDKKKKNPHDTEDDEDEDLNEEDEEENDEDEEHKKKNEKKKKDGDDDEPDDE 247
Query: 222 HADKSGEKSERESKRKHRNRDDEKNRDKSAAKKVDLGKG-HD 262
H ++ EK +++ K K++ ++++KN +K+ D K HD
Sbjct: 248 HDEEDEEKEKKKKKEKNKEKNNKKNNNKNIKPHEDHHKNDHD 289
Score = 53 (23.7 bits), Expect = 0.00067, Sum P(2) = 0.00067
Identities = 36/158 (22%), Positives = 65/158 (41%)
Query: 730 NDETNEKG-ERLEEVTDHK-SIK---NNELEILNDSK-EVMEAGEVNNVKDNRPASGTMG 783
N + EK E + +HK +IK N+E+ ILN++ M + NV N M
Sbjct: 306 NKKHQEKQHEEHQNNNNHKENIKKEENHEIPILNNNPLNQMTNMAIPNVSQN--ILPIMD 363
Query: 784 DEPSQLCELDTDMAVEYQARDSTSEI-VSQGVPTQ-VNTLKDSPCAHDDKVTCNIQLEHM 841
+ ++ E T + E Q + +I + + + LK+ + Q EH+
Sbjct: 364 NSIPKMEEKHTPINNEIQYNKNNEDIHIPDDIKNDFMKLLKNVVSLNSKNNLYKSQHEHL 423
Query: 842 SEENKSSAKEDLNL-------EEVNGNSEAFTGASNEM 872
E+ K+ E+ L ++++ NS F N +
Sbjct: 424 KEDEKNKHSENPALYNKLFYGQDIHNNSSFFNKIINHI 461
>UNIPROTKB|Q8IJQ7 [details] [associations]
symbol:PF10_0135 "Conserved Plasmodium protein"
species:36329 "Plasmodium falciparum 3D7" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] EMBL:AE014185 RefSeq:XP_001347420.2
ProteinModelPortal:Q8IJQ7 IntAct:Q8IJQ7 MINT:MINT-1560502
EnsemblProtists:PF10_0135:mRNA GeneID:810293 KEGG:pfa:PF10_0135
EuPathDB:PlasmoDB:PF3D7_1013800 ProtClustDB:CLSZ2500831
Uniprot:Q8IJQ7
Length = 486
Score = 115 (45.5 bits), Expect = 0.00067, Sum P(2) = 0.00067
Identities = 39/162 (24%), Positives = 73/162 (45%)
Query: 104 KEDNALTKNVDSSRQRDGENRDLETKLKEDYVAKSNHRRTLKSEIRLKDRSPGNEKDRGN 163
K+D + TKN +Q G+N+D E +D + ++S+ LK++S K +
Sbjct: 137 KDDKSKTKN---EKQDKGKNKD-EFDNDDDLIDDEEVDDDVESD-DLKNKSKNKSKSK-- 189
Query: 164 RGSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQSIVD--SRDEATKKHSRDLTGKDR 221
D K K D K+ ++ + + N + ++E KK D D
Sbjct: 190 --QDEKKKNDKKKKNPHDTEDDEDEDLNEEDEEENDEDEEHKKKNEKKKKDGDDDEPDDE 247
Query: 222 HADKSGEKSERESKRKHRNRDDEKNRDKSAAKKVDLGKG-HD 262
H ++ EK +++ K K++ ++++KN +K+ D K HD
Sbjct: 248 HDEEDEEKEKKKKKEKNKEKNNKKNNNKNIKPHEDHHKNDHD 289
Score = 53 (23.7 bits), Expect = 0.00067, Sum P(2) = 0.00067
Identities = 36/158 (22%), Positives = 65/158 (41%)
Query: 730 NDETNEKG-ERLEEVTDHK-SIK---NNELEILNDSK-EVMEAGEVNNVKDNRPASGTMG 783
N + EK E + +HK +IK N+E+ ILN++ M + NV N M
Sbjct: 306 NKKHQEKQHEEHQNNNNHKENIKKEENHEIPILNNNPLNQMTNMAIPNVSQN--ILPIMD 363
Query: 784 DEPSQLCELDTDMAVEYQARDSTSEI-VSQGVPTQ-VNTLKDSPCAHDDKVTCNIQLEHM 841
+ ++ E T + E Q + +I + + + LK+ + Q EH+
Sbjct: 364 NSIPKMEEKHTPINNEIQYNKNNEDIHIPDDIKNDFMKLLKNVVSLNSKNNLYKSQHEHL 423
Query: 842 SEENKSSAKEDLNL-------EEVNGNSEAFTGASNEM 872
E+ K+ E+ L ++++ NS F N +
Sbjct: 424 KEDEKNKHSENPALYNKLFYGQDIHNNSSFFNKIINHI 461
>CGD|CAL0000983 [details] [associations]
symbol:orf19.4332 species:5476 "Candida albicans" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
EMBL:AACQ01000021 RefSeq:XP_720763.1 GeneID:3637581
KEGG:cal:CaO19.11806 CGD:CAL0062632 Uniprot:Q5AGI7
Length = 1486
Score = 123 (48.4 bits), Expect = 0.00070, Sum P(2) = 0.00070
Identities = 47/175 (26%), Positives = 74/175 (42%)
Query: 95 EYVKVGSGKKEDNALTKNVD--SSRQRDGEN---RDLETKLKEDYVA-KSNHRRTLKSEI 148
E KV KK+D+ K D +Q D E+ ++ E K +ED+ K +H + E
Sbjct: 681 EKPKVIDKKKQDHERKKQEDHDKKKQEDHEHEKQKEHERKKQEDHEREKEDHEHEKEKEH 740
Query: 149 RLKDRSPGNEKDRGNRGSDTKLKA-DVTKETSSKPNVKSEKLIPSQGRSHNQSIVDSRDE 207
K++ EK+ K K D KE + + EK +G+ H + + E
Sbjct: 741 E-KEKEHEKEKEHEKEKEHEKEKEKDHGKEKEKEKEHEKEKE-HGKGKDHGK---EKDHE 795
Query: 208 ATKKHSRDLTGKDRHADKSGEKSERESKRKHRNRDDEKNRDKSAAKKVDLGKGHD 262
K H ++ KD +K EK + K K ++ EK+ +K K K HD
Sbjct: 796 KEKDHEKE---KDHEKEKDHEKEKDHEKEKDHEKEKEKDHEKEKPKDHGKKKEHD 847
Score = 56 (24.8 bits), Expect = 0.00070, Sum P(2) = 0.00070
Identities = 16/49 (32%), Positives = 29/49 (59%)
Query: 720 ASAGVGQ-NLTNDETNEKGERLE--EVTDHKSIKNNELEILNDSKEVME 765
A A VG NL + ++++ + L ++ ++K +K NEL +ND E +E
Sbjct: 1009 AKAKVGSFNLVSQGSDKQQDELTIAKLKENKVVKENELFGMNDEIEELE 1057
>UNIPROTKB|Q5AGI7 [details] [associations]
symbol:CaO19.11806 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
EMBL:AACQ01000021 RefSeq:XP_720763.1 GeneID:3637581
KEGG:cal:CaO19.11806 CGD:CAL0062632 Uniprot:Q5AGI7
Length = 1486
Score = 123 (48.4 bits), Expect = 0.00070, Sum P(2) = 0.00070
Identities = 47/175 (26%), Positives = 74/175 (42%)
Query: 95 EYVKVGSGKKEDNALTKNVD--SSRQRDGEN---RDLETKLKEDYVA-KSNHRRTLKSEI 148
E KV KK+D+ K D +Q D E+ ++ E K +ED+ K +H + E
Sbjct: 681 EKPKVIDKKKQDHERKKQEDHDKKKQEDHEHEKQKEHERKKQEDHEREKEDHEHEKEKEH 740
Query: 149 RLKDRSPGNEKDRGNRGSDTKLKA-DVTKETSSKPNVKSEKLIPSQGRSHNQSIVDSRDE 207
K++ EK+ K K D KE + + EK +G+ H + + E
Sbjct: 741 E-KEKEHEKEKEHEKEKEHEKEKEKDHGKEKEKEKEHEKEKE-HGKGKDHGK---EKDHE 795
Query: 208 ATKKHSRDLTGKDRHADKSGEKSERESKRKHRNRDDEKNRDKSAAKKVDLGKGHD 262
K H ++ KD +K EK + K K ++ EK+ +K K K HD
Sbjct: 796 KEKDHEKE---KDHEKEKDHEKEKDHEKEKDHEKEKEKDHEKEKPKDHGKKKEHD 847
Score = 56 (24.8 bits), Expect = 0.00070, Sum P(2) = 0.00070
Identities = 16/49 (32%), Positives = 29/49 (59%)
Query: 720 ASAGVGQ-NLTNDETNEKGERLE--EVTDHKSIKNNELEILNDSKEVME 765
A A VG NL + ++++ + L ++ ++K +K NEL +ND E +E
Sbjct: 1009 AKAKVGSFNLVSQGSDKQQDELTIAKLKENKVVKENELFGMNDEIEELE 1057
>DICTYBASE|DDB_G0302588 [details] [associations]
symbol:DDB_G0302588 "RanBP2-type zinc finger"
species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR001876 PROSITE:PS01358 SMART:SM00547
dictyBase:DDB_G0302588 GO:GO:0008270 EMBL:AAFI02000003
GO:GO:0005622 RefSeq:XP_002649209.1 EnsemblProtists:DDB0302589
GeneID:8616202 KEGG:ddi:DDB_G0302588 OMA:VKFESPA Uniprot:C7FZW3
Length = 3566
Score = 95 (38.5 bits), Expect = 0.00071, Sum P(3) = 0.00071
Identities = 49/246 (19%), Positives = 96/246 (39%)
Query: 17 PSLADSNEGSAART-RPFSFDEIMIRRKTKNLSENIKEDAMDVSNIPGDCTIENVXXXXX 75
PS++++ + + T +P ++SEN D +N P + T N
Sbjct: 1232 PSISENKSTTTSDTNKPVETTTTTTATSPPSISENKPITTSD-TNKPVETTTSNTLFGAT 1290
Query: 76 XXXXXXXXXXPGVDVHTSEEYVKVGSGKKEDNALTKNVDSSRQRDGENRDLETKLKEDYV 135
+ T S + L+K SS + E+ D E +ED
Sbjct: 1291 TTTTGLFGLTKTSNTATGISLFGNSSSILNSSLLSKKDGSSDEDSDEDSD-EQDSEEDSE 1349
Query: 136 AKSNHRRTLKSEIRLKDRSPGNEKDRGNRGSDTKLKADVTKETSSKPNVKSEKLIPSQGR 195
+ S ++ K ++KD NR T LK ++K+ ++ N + + + P Q +
Sbjct: 1350 EEKGKTTKSNSSLQRKKNEVSHKKDSKNR-LQT-LKDKISKKNNNN-NTQKDIIKPQQQK 1406
Query: 196 SH-NQSIV----DSRDEATKKHSRDLTGKDRHADKSGEKSERESKRKHRNRDDEKNRDKS 250
+QS D +DE + D D A++ ++ + E + + +DE++ D+
Sbjct: 1407 QQTSQSSKNLSDDDQDEEYESQEEDENQDDDQANEEYDEDDYEEEDEDYE-EDEEDEDEE 1465
Query: 251 AAKKVD 256
++ D
Sbjct: 1466 EEEEED 1471
Score = 87 (35.7 bits), Expect = 0.00071, Sum P(3) = 0.00071
Identities = 43/213 (20%), Positives = 86/213 (40%)
Query: 691 FGSVKSVNVVKYGDSNISTIQACEGNENTASAGVGQNLTNDETN--EKGERLEEVTD--- 745
FGS ++ +GD + S+ E + +S+ T++ T EK + +E+ TD
Sbjct: 3247 FGSTATIKT--FGDLSKSSSSNNENKDQPSSSPSPSKPTSESTTKEEKVDIVEDKTDKIE 3304
Query: 746 -HKSIKNNELEILNDSKEVMEAGEVNNVKDNRPASGTMGDEPSQLCELDTDMAVEYQARD 804
+K +E I D+ E N ++N+ + E ++ E + + ++ Q +
Sbjct: 3305 ENKEDSEDEKVITEDTNNQSEIKVEENKEENKEENKEENKEENKEEEKEEEKRIKQQQQS 3364
Query: 805 STSEIVSQGVPTQVNTLKDSPCAHDDKVTCNIQLEHMSEENKSSAKEDLNLEEVNGNSEA 864
SE + + K D + C ++ E +SEE KE+++ + N + +
Sbjct: 3365 IESESDKRENEMEDKFSKIEELVKPDFIPCKVE-EKLSEEQ---TKENIDNNDDNNTTSS 3420
Query: 865 FTGASNEMGMQSSAVENGDNENQ---DPNQGHI 894
N + + DN+ D N+ I
Sbjct: 3421 IVVQENT----TETISENDNDQSIQLDSNKQEI 3449
Score = 56 (24.8 bits), Expect = 0.00071, Sum P(3) = 0.00071
Identities = 23/69 (33%), Positives = 31/69 (44%)
Query: 372 TEAAAKTPSPINRSPEKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTT 431
T A+T +P +P S+ + P + SV + T +ASSN SS TT
Sbjct: 1491 TSNPAQTTTPTTSTPTPSSSIFGQPPTSS-SVFGSKPTVFGSASSN-----SSSVFGQTT 1544
Query: 432 QKPLAGISV 440
KP G SV
Sbjct: 1545 TKPSTGSSV 1553
>FB|FBgn0031273 [details] [associations]
symbol:CG2839 species:7227 "Drosophila melanogaster"
[GO:0030246 "carbohydrate binding" evidence=IEA] InterPro:IPR001304
Pfam:PF00059 PROSITE:PS50041 SMART:SM00034 EMBL:AE014134
GO:GO:0030246 Gene3D:3.10.100.10 InterPro:IPR016186
InterPro:IPR016187 SUPFAM:SSF56436 HSSP:P22897
GeneTree:ENSGT00700000104356 RefSeq:NP_608540.1
ProteinModelPortal:Q9VPS3 SMR:Q9VPS3 EnsemblMetazoa:FBtr0077999
GeneID:33244 KEGG:dme:Dmel_CG2839 UCSC:CG2839-RA
FlyBase:FBgn0031273 eggNOG:NOG243297 OMA:RIMEKER OrthoDB:EOG4DBRWH
PhylomeDB:Q9VPS3 GenomeRNAi:33244 NextBio:782628
ArrayExpress:Q9VPS3 Uniprot:Q9VPS3
Length = 826
Score = 124 (48.7 bits), Expect = 0.00072, P = 0.00072
Identities = 35/152 (23%), Positives = 68/152 (44%)
Query: 103 KKEDNALTKNVDSSRQRDGENRDLETKLKEDYVAKSNHRRTLKSEIRLKDRSPGNEKDRG 162
KKED + KN R + E E K KE+ + R+ + E R ++ E++R
Sbjct: 269 KKEDE-INKNQGKPRIMEKERSKEEEKRKEEERRREEERK--REEERKREEERKREEER- 324
Query: 163 NRGSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQSIVDSRDEATKKHSRDLTGKDRH 222
R + K + + KE K + E+ + R HN+ + R K+ + K+
Sbjct: 325 KREEERKREEERRKEEERKKEEERERE-EERKREHNRKKEEERKREEKRRKEEEKRKEEE 383
Query: 223 ADKSGEKSERESKRKHRNRDDEKNRDKSAAKK 254
K E+ E E +++ +++E+ +++ K+
Sbjct: 384 RRKEEERKEEERRKEEERKEEERRKEEERRKE 415
>UNIPROTKB|Q5LKH1 [details] [associations]
symbol:Q5LKH1 "Putative uncharacterized protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR008160 Pfam:PF01391 EMBL:CP000032
GenomeReviews:CP000032_GR RefSeq:YP_165237.1 GeneID:3196697
KEGG:sil:SPOA0410 PATRIC:23382176 OMA:NEGNEGD Uniprot:Q5LKH1
Length = 642
Score = 81 (33.6 bits), Expect = 0.00077, Sum P(3) = 0.00077
Identities = 45/189 (23%), Positives = 79/189 (41%)
Query: 714 EGNENTASAGVGQNLTNDETNEKGERLEEVTDHKSIKNNELEILNDSKEVMEAGEVNNV- 772
EGNE S + NDE +E E E + + +NNE + N+ E E E N
Sbjct: 444 EGNEGNESNEGNEGGLNDEGDEGDENDEGNENDEGDENNEGDEGNEDNEGNEEDEGNEDD 503
Query: 773 ---KDNRPASGTMGDEPSQLCELDTDMAVEYQARDSTSEIVSQGVPTQVNTLKDSPCAHD 829
+DN G DE + E D + ++ +R + +G +D+ D
Sbjct: 504 EGDEDNEDDEGDEDDEGDEDDEGDESLEPDHPSRHDEGD---EGDEDDEGD-EDADALLD 559
Query: 830 DKVTCNIQLEHMSEENKSSAKEDLNLEEVNGNSEAFTGASNEMGMQSSAVENGDNENQDP 889
D+ + + + N+ ED NL + +GN + + G + + +NGD E +
Sbjct: 560 DEGDEGDEGDENDDGNEGD--EDDNLAD-SGNED-------DEGDELNEPDNGD-EGDEH 608
Query: 890 NQGHIFEPG 898
++G+ + G
Sbjct: 609 DEGNEHDEG 617
Score = 76 (31.8 bits), Expect = 0.00077, Sum P(3) = 0.00077
Identities = 22/93 (23%), Positives = 38/93 (40%)
Query: 156 GNEKDRGNRGSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQSIVDSRDEATKKHSRD 215
GNE D GN G + + + + ++ N E +G N++ D DE + + D
Sbjct: 213 GNEGDEGNEGDEGLINIGLEGDEGNEGNEGDEN---DEGNEGNEN--DENDEGDENNEAD 267
Query: 216 LTGKDRHADKSGEKSERESKRKHRNRDDEKNRD 248
+ D+ GE R + + DE + D
Sbjct: 268 EGNEFDEGDEDGEFFGRGQEADEGDEGDEDDED 300
Score = 58 (25.5 bits), Expect = 0.00077, Sum P(3) = 0.00077
Identities = 14/69 (20%), Positives = 26/69 (37%)
Query: 99 VGSGKKEDNALTKNVDSSRQRDGENRDLETKLKEDYVAKSNHRRTLKSEIRLKDRSPGNE 158
+ SG + D N + E ++ +D + N + ++ GNE
Sbjct: 26 ISSGDEGDEGNEDNEGNENDEGNEGNEISASTYDDDHNEGNEGNEGNEGVDGQEDDEGNE 85
Query: 159 KDRGNRGSD 167
D GN G++
Sbjct: 86 GDEGNEGNE 94
>TIGR_CMR|SPO_A0410 [details] [associations]
symbol:SPO_A0410 "hypothetical protein" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR008160
Pfam:PF01391 EMBL:CP000032 GenomeReviews:CP000032_GR
RefSeq:YP_165237.1 GeneID:3196697 KEGG:sil:SPOA0410 PATRIC:23382176
OMA:NEGNEGD Uniprot:Q5LKH1
Length = 642
Score = 81 (33.6 bits), Expect = 0.00077, Sum P(3) = 0.00077
Identities = 45/189 (23%), Positives = 79/189 (41%)
Query: 714 EGNENTASAGVGQNLTNDETNEKGERLEEVTDHKSIKNNELEILNDSKEVMEAGEVNNV- 772
EGNE S + NDE +E E E + + +NNE + N+ E E E N
Sbjct: 444 EGNEGNESNEGNEGGLNDEGDEGDENDEGNENDEGDENNEGDEGNEDNEGNEEDEGNEDD 503
Query: 773 ---KDNRPASGTMGDEPSQLCELDTDMAVEYQARDSTSEIVSQGVPTQVNTLKDSPCAHD 829
+DN G DE + E D + ++ +R + +G +D+ D
Sbjct: 504 EGDEDNEDDEGDEDDEGDEDDEGDESLEPDHPSRHDEGD---EGDEDDEGD-EDADALLD 559
Query: 830 DKVTCNIQLEHMSEENKSSAKEDLNLEEVNGNSEAFTGASNEMGMQSSAVENGDNENQDP 889
D+ + + + N+ ED NL + +GN + + G + + +NGD E +
Sbjct: 560 DEGDEGDEGDENDDGNEGD--EDDNLAD-SGNED-------DEGDELNEPDNGD-EGDEH 608
Query: 890 NQGHIFEPG 898
++G+ + G
Sbjct: 609 DEGNEHDEG 617
Score = 76 (31.8 bits), Expect = 0.00077, Sum P(3) = 0.00077
Identities = 22/93 (23%), Positives = 38/93 (40%)
Query: 156 GNEKDRGNRGSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQSIVDSRDEATKKHSRD 215
GNE D GN G + + + + ++ N E +G N++ D DE + + D
Sbjct: 213 GNEGDEGNEGDEGLINIGLEGDEGNEGNEGDEN---DEGNEGNEN--DENDEGDENNEAD 267
Query: 216 LTGKDRHADKSGEKSERESKRKHRNRDDEKNRD 248
+ D+ GE R + + DE + D
Sbjct: 268 EGNEFDEGDEDGEFFGRGQEADEGDEGDEDDED 300
Score = 58 (25.5 bits), Expect = 0.00077, Sum P(3) = 0.00077
Identities = 14/69 (20%), Positives = 26/69 (37%)
Query: 99 VGSGKKEDNALTKNVDSSRQRDGENRDLETKLKEDYVAKSNHRRTLKSEIRLKDRSPGNE 158
+ SG + D N + E ++ +D + N + ++ GNE
Sbjct: 26 ISSGDEGDEGNEDNEGNENDEGNEGNEISASTYDDDHNEGNEGNEGNEGVDGQEDDEGNE 85
Query: 159 KDRGNRGSD 167
D GN G++
Sbjct: 86 GDEGNEGNE 94
>DICTYBASE|DDB_G0276189 [details] [associations]
symbol:DDB_G0276189 species:44689 "Dictyostelium
discoideum" [GO:0044351 "macropinocytosis" evidence=RCA]
dictyBase:DDB_G0276189 EMBL:AAFI02000014 InterPro:IPR013240
Pfam:PF08208 RefSeq:XP_643299.1 EnsemblProtists:DDB0203501
GeneID:8620345 KEGG:ddi:DDB_G0276189 eggNOG:NOG292646 OMA:GKELWLI
Uniprot:Q552C9
Length = 321
Score = 118 (46.6 bits), Expect = 0.00077, P = 0.00077
Identities = 34/147 (23%), Positives = 69/147 (46%)
Query: 110 TKNVDSSRQRDGENRDLETKLKEDYVAKSNHRRTLKSEIRLKDRSPGNEK--DRGNRGSD 167
T +S+ + EN+ K KE+ +SE K +S N+K + ++ S
Sbjct: 175 TTTTTTSKTAEKENKKENKKEKENKKEVKKQESESESESEDKKKSSKNDKKSSKKDKKSS 234
Query: 168 TKLKADVTKETSSKPNVKSEKLIPSQGRSHNQSIVDSRDEATKKHSRDLTGKDRHADKSG 227
K ++ +E+S + + + EK +S + +++ E +KK + + K+ KS
Sbjct: 235 KKQESSSEEESSDESSSEEEKKTKKSKKSSSSKKEETKKEESKKSKKSSSKKE----KSD 290
Query: 228 EKSERESKRKHRNRDDEKNRDKSAAKK 254
+SE E K+K + + D+ + + +KK
Sbjct: 291 SESEPEKKKKEKRKKDDSSENNEQSKK 317
>MGI|MGI:2445173 [details] [associations]
symbol:Ppig "peptidyl-prolyl isomerase G (cyclophilin G)"
species:10090 "Mus musculus" [GO:0000413 "protein peptidyl-prolyl
isomerization" evidence=ISO] [GO:0003755 "peptidyl-prolyl cis-trans
isomerase activity" evidence=ISO] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006457 "protein folding" evidence=IEA]
[GO:0016363 "nuclear matrix" evidence=ISO] [GO:0016853 "isomerase
activity" evidence=IEA] InterPro:IPR002130 InterPro:IPR020892
Pfam:PF00160 PRINTS:PR00153 PROSITE:PS00170 PROSITE:PS50072
MGI:MGI:2445173 GO:GO:0005737 GO:GO:0006457 GO:GO:0016607
GO:GO:0016363 EMBL:AL845261 eggNOG:COG0652 GO:GO:0003755
SUPFAM:SSF50891 GO:GO:0000413 GeneTree:ENSGT00550000074595
KO:K09566 CTD:9360 HOVERGEN:HBG048162 OMA:NKKFDHE OrthoDB:EOG43FGWT
EMBL:U91923 EMBL:AK135713 EMBL:AK164670 IPI:IPI00349306
RefSeq:NP_001074555.1 UniGene:Mm.11815 UniGene:Mm.474951
UniGene:Mm.488936 ProteinModelPortal:A2AR02 SMR:A2AR02
STRING:A2AR02 PhosphoSite:A2AR02 PaxDb:A2AR02 PRIDE:A2AR02
Ensembl:ENSMUST00000040915 Ensembl:ENSMUST00000090858 GeneID:228005
KEGG:mmu:228005 UCSC:uc008jyl.1 HOGENOM:HOG000115659
InParanoid:A2AR02 NextBio:378889 Bgee:A2AR02 CleanEx:MM_PPIG
Genevestigator:A2AR02 Uniprot:A2AR02
Length = 752
Score = 120 (47.3 bits), Expect = 0.00078, Sum P(2) = 0.00078
Identities = 43/168 (25%), Positives = 85/168 (50%)
Query: 103 KKEDNALTKNVDSSRQRD-GENRDLETKLKEDYVAKSNHRRTLKSEIRLKDRSPGNEKD- 160
+KE A + S++RD N + + K ++ V K R KS + K+RS E+D
Sbjct: 419 EKEKKA-KDHKSESKERDIRRNSEKDDKYNKNKVKK---RGKSKSRSKSKERSKSKERDS 474
Query: 161 RGNRGSDTKLKADVTKETSSKPNVKSEKLIPSQGRSH--NQSIVDSRDEATKKHSRDLTG 218
+ +R D ++++ +KE + + EK + +G+ ++S +S+ +K + D +
Sbjct: 475 KHSRHEDKRVRSR-SKERDHETTKEKEKPLDPKGKDQERSRSKENSKQVESKSNEHDHSK 533
Query: 219 ---KDRHAD-KSGEKSERESKRKHRNRDDEKNRDKSAAKKVDLGKGHD 262
KDR A +S E+ +SK + +R E++R + +++V + HD
Sbjct: 534 SKEKDRRAQSRSRERDLTKSKHSYNSRTRERSRSRDRSRRVR-SRSHD 580
Score = 52 (23.4 bits), Expect = 0.00078, Sum P(2) = 0.00078
Identities = 26/127 (20%), Positives = 49/127 (38%)
Query: 307 RAQKRTSYYDREHEGLPSHSTKISSGRQHSDIDSSRVTGNGLSGHYRRHDGSTSGLGGYS 366
R + R+ DR G S S R+ S + + YR + +S S
Sbjct: 598 RRRGRSRSRDRRTPGR-SRSKDRRRRRRDSRSSEREESQSRNKDKYRSQESKSSHRKENS 656
Query: 367 PRKRRTEAAAKTPSPINRSPEKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDP 426
++RT + ++ + + + EKK+ + + +PV S + + N + + P
Sbjct: 657 EGEKRTYSKSRDHNSSSNNREKKADR-EQSPVSKTKQSSQDNEVKSSTLKNQEDEKTRSP 715
Query: 427 VTSTTQK 433
V QK
Sbjct: 716 VEKENQK 722
>RGD|1595401 [details] [associations]
symbol:LOC681423 "similar to delangin isoform A" species:10116
"Rattus norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] REFSEQ:XM_001056725
Ncbi:XP_001056725
Length = 2577
Score = 133 (51.9 bits), Expect = 0.00082, Sum P(3) = 0.00082
Identities = 45/166 (27%), Positives = 72/166 (43%)
Query: 98 KVGSGKKEDNAL-TKNVDSSRQ-RDGENRDLETKLKEDYVAKSNHRRTLKSEIRLKDRSP 155
++G K ++ L TK + + + EN+ E+K E V + ++E RL D P
Sbjct: 629 QLGESKSNESKLETKTETQTEELKQSENKTTESKQSESAVVEPK-----QNENRLCDTKP 683
Query: 156 GNEKDRGNRGSDTKLKADVTKETS-SKPNVKSEKLIPSQGRSHN-QSIVDSRDEATKKHS 213
+ K R +TK + + K+ + S+P +K S+GR + D R E K+ S
Sbjct: 684 NDNKQNNTRSENTKARPETPKQKAESRPETPKQK---SEGRPETPKQKGDGRPETPKQKS 740
Query: 214 RDLTGKDRHADKSGEKSERESKRKHRNRDDEKNRDKSAAKKVDLGK 259
G+ + GE K +H NR D S KK D+ K
Sbjct: 741 E---GRPETPKQKGEGRPETPKHRHENRKDSGK--PSTEKKPDVSK 781
Score = 62 (26.9 bits), Expect = 0.00082, Sum P(3) = 0.00082
Identities = 24/90 (26%), Positives = 35/90 (38%)
Query: 310 KRTSYYDREHEGLPSHSTKISSGRQHSDIDSSRVTGNGLSGHYRRHDGSTSGLGGYSPRK 369
K Y +R+ H SG H D R +G G YR S S + YSP
Sbjct: 1107 KAWEYEERDRRSSGDHRR---SGHSH---DGRRSSGGG---RYRNRSPSDSDMEDYSPPP 1157
Query: 370 RRTEAAAKTPSPINRSPEKKSAKWDVAPVE 399
+E A K + ++K+ + + P E
Sbjct: 1158 SLSEVARKMKKK-EKQKKRKAYEPKLTPEE 1186
Score = 37 (18.1 bits), Expect = 0.00082, Sum P(3) = 0.00082
Identities = 11/38 (28%), Positives = 18/38 (47%)
Query: 794 TDMAVEYQARDSTSEIVSQGVPTQVNTLKDSPCAHDDK 831
T+M V+ R + E + + V L +P H+DK
Sbjct: 1659 TEMCVKMIRRVNDEEGIKKLVNETFQKLWFTPTPHNDK 1696
>ZFIN|ZDB-GENE-070912-423 [details] [associations]
symbol:rpgra "retinitis pigmentosa GTPase regulator
a" species:7955 "Danio rerio" [GO:0072001 "renal system
development" evidence=IMP] INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-070912-423 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GO:GO:0072001 GeneTree:ENSGT00700000104160 EMBL:BX571713
IPI:IPI00955233 RefSeq:XP_003199276.1 Ensembl:ENSDART00000079095
GeneID:571327 KEGG:dre:571327 CTD:571327 NextBio:20890513
Bgee:F1QV77 Uniprot:F1QV77
Length = 1698
Score = 102 (41.0 bits), Expect = 0.00083, Sum P(2) = 0.00083
Identities = 35/170 (20%), Positives = 75/170 (44%)
Query: 89 DVHTSEEYVKVGSGKKEDNALTKNV-DSSRQRDGENRDLETKLKEDYVA------KSNHR 141
D+ SEE V+ G++E K+ D +R+ E+ D E +++++ SN
Sbjct: 1173 DMAESEE-VEESEGQEEGETEDKDAEDEEEERESEDEDSERQIEDEEKTDAEEGESSNEG 1231
Query: 142 RTLKSE---IRLKDRSPGNEKDRGNRGSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHN 198
+SE + DRS E + GS+ + + DV + + V +E + N
Sbjct: 1232 EPERSESEDVSKNDRSDEEEGESEENGSEREEEEDVLEGEQEESEVGNEDEENQEEEEEN 1291
Query: 199 QSIVDSRDEATKKHSRDLTGKDRHADKSGEKSERESKRKHRNRDDEKNRD 248
Q+ + +E ++ + + +D + EK E+E + + + + + ++
Sbjct: 1292 QTKEEEEEENNEEMKEENSSEDEGEESVREKEEQEVEEEKLSEEGSERQE 1341
Score = 78 (32.5 bits), Expect = 0.00083, Sum P(2) = 0.00083
Identities = 33/161 (20%), Positives = 68/161 (42%)
Query: 730 NDETNEKGERLEEVTDHKSIKNNELEILNDSKEVMEAGEVN-NVKDNRPASGTMGDEPSQ 788
N+E E+ E E + K ++NE E +E E GE NV+ ++ S ++ +
Sbjct: 1465 NEEEEEEEEEAEW-KEKKQRESNEEEEEEGEEEKEEEGEQKENVEKDKQNSKLRENKDEE 1523
Query: 789 LCELDTDMAVEYQARDSTSEIVSQGVPTQVNTLKDSPCAHDDKVTCNIQLEHMSEENKSS 848
E + E + + +E ++ + T + K +++ E EE + +
Sbjct: 1524 EEEEEEGEEEEEEGEEEENEPKNKNIKTGKDGRKQRTITEEEEEEEEGN-EEEEEEEEET 1582
Query: 849 AKEDLNLE-EVNGNSEAFTGASNEMGMQSSAVENGDNENQD 888
+E N++ E N + + T E G + E ++E ++
Sbjct: 1583 KREKKNIKTEKNRHKQTVTSEEEEEGEEEEEEEEEESEEEE 1623
>GENEDB_PFALCIPARUM|PFD0207c [details] [associations]
symbol:PFD0207c "hypothetical protein,
conserved" species:5833 "Plasmodium falciparum" [GO:0020011
"apicoplast" evidence=RCA] InterPro:IPR000156 SMART:SM00160
GO:GO:0046907 EMBL:AL844503 RefSeq:XP_001351355.1
ProteinModelPortal:Q8I1Y6 PRIDE:Q8I1Y6
EnsemblProtists:PFD0207c:mRNA GeneID:812454 KEGG:pfa:PFD0207c
EuPathDB:PlasmoDB:PF3D7_0404300 OMA:ANEDEFP ProtClustDB:CLSZ2433358
Uniprot:Q8I1Y6
Length = 639
Score = 92 (37.4 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 32/162 (19%), Positives = 65/162 (40%)
Query: 103 KKEDNALTKNVDSSRQRDGENRDLETKLKEDYVAKSNHRRTLKSEIRLKDRSP----GNE 158
K E ++L +N ++ ++ +D+ T + + + + I + D++ N
Sbjct: 42 KTELDSLNQNENTIENKNDYTKDIRTTQHDAIMQEGIEKNEDSCNIIINDKNKMKKKKNG 101
Query: 159 KDRGNR-GSDTKL---KADVTKETSSKPNVKSEKLIPSQGRSHNQSIVDSRDEATKKHSR 214
KDR N +TK K KE K +K K + S N D +E +
Sbjct: 102 KDRKNSFAEETKKTIQKKSNVKEKKRKKELKKNKKVTSDENVRNAE--DEEEEEDEDEEE 159
Query: 215 DLTGKDRHADKSGEKSERESKRKHRNRDDEKNRDKSAAKKVD 256
+ ++ ++ E+ E E + + +DE+ D+ + D
Sbjct: 160 EEEDEEEEEEEEDEEEEDEEDEEEEDEEDEEEEDEEDEDEED 201
Score = 79 (32.9 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 41/177 (23%), Positives = 66/177 (37%)
Query: 714 EGNENTASAGVGQNLTNDETNEKGERLEEVTDHKSIKNNELEILNDSKEVMEAGEVNNVK 773
E E G ND+ NEK + EE D + ++E E ND E + E N+
Sbjct: 216 EDEEENDDNGNDDGEENDD-NEKDDDDEEKDDEEENDDDE-E--NDDDENDDDVE-NDDN 270
Query: 774 DNRPASGTMGDEPSQLCELDTDMAVEYQARDSTSEIVSQGVPTQVNTLKDSPCAHDDKVT 833
+N +E E D D+ + + E + D +DD
Sbjct: 271 ENDDDEENNDNENDDDVENDDDVENDDDEENDDDEENDDDEENDDDEENDDDVENDDDEE 330
Query: 834 CNIQLEHMSEENKSSAKEDLNLEEVNGNSEAFTGASNEMGMQSSAVENGDNENQDPN 890
+ E+ +E +E+ + EE + N E N+ ++ EN D+E D N
Sbjct: 331 NDDDEENDDDEENDDDEENDDDEENDDNEENDDNEENDDNEENDDNENDDDEENDDN 387
>UNIPROTKB|Q8I1Y6 [details] [associations]
symbol:PFD0207c "Putative uncharacterized protein"
species:36329 "Plasmodium falciparum 3D7" [GO:0020011 "apicoplast"
evidence=RCA] InterPro:IPR000156 SMART:SM00160 GO:GO:0046907
EMBL:AL844503 RefSeq:XP_001351355.1 ProteinModelPortal:Q8I1Y6
PRIDE:Q8I1Y6 EnsemblProtists:PFD0207c:mRNA GeneID:812454
KEGG:pfa:PFD0207c EuPathDB:PlasmoDB:PF3D7_0404300 OMA:ANEDEFP
ProtClustDB:CLSZ2433358 Uniprot:Q8I1Y6
Length = 639
Score = 92 (37.4 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 32/162 (19%), Positives = 65/162 (40%)
Query: 103 KKEDNALTKNVDSSRQRDGENRDLETKLKEDYVAKSNHRRTLKSEIRLKDRSP----GNE 158
K E ++L +N ++ ++ +D+ T + + + + I + D++ N
Sbjct: 42 KTELDSLNQNENTIENKNDYTKDIRTTQHDAIMQEGIEKNEDSCNIIINDKNKMKKKKNG 101
Query: 159 KDRGNR-GSDTKL---KADVTKETSSKPNVKSEKLIPSQGRSHNQSIVDSRDEATKKHSR 214
KDR N +TK K KE K +K K + S N D +E +
Sbjct: 102 KDRKNSFAEETKKTIQKKSNVKEKKRKKELKKNKKVTSDENVRNAE--DEEEEEDEDEEE 159
Query: 215 DLTGKDRHADKSGEKSERESKRKHRNRDDEKNRDKSAAKKVD 256
+ ++ ++ E+ E E + + +DE+ D+ + D
Sbjct: 160 EEEDEEEEEEEEDEEEEDEEDEEEEDEEDEEEEDEEDEDEED 201
Score = 79 (32.9 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 41/177 (23%), Positives = 66/177 (37%)
Query: 714 EGNENTASAGVGQNLTNDETNEKGERLEEVTDHKSIKNNELEILNDSKEVMEAGEVNNVK 773
E E G ND+ NEK + EE D + ++E E ND E + E N+
Sbjct: 216 EDEEENDDNGNDDGEENDD-NEKDDDDEEKDDEEENDDDE-E--NDDDENDDDVE-NDDN 270
Query: 774 DNRPASGTMGDEPSQLCELDTDMAVEYQARDSTSEIVSQGVPTQVNTLKDSPCAHDDKVT 833
+N +E E D D+ + + E + D +DD
Sbjct: 271 ENDDDEENNDNENDDDVENDDDVENDDDEENDDDEENDDDEENDDDEENDDDVENDDDEE 330
Query: 834 CNIQLEHMSEENKSSAKEDLNLEEVNGNSEAFTGASNEMGMQSSAVENGDNENQDPN 890
+ E+ +E +E+ + EE + N E N+ ++ EN D+E D N
Sbjct: 331 NDDDEENDDDEENDDDEENDDDEENDDNEENDDNEENDDNEENDDNENDDDEENDDN 387
>UNIPROTKB|E1BWK3 [details] [associations]
symbol:AP3D1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0008565
"protein transporter activity" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0030117 "membrane
coat" evidence=IEA] InterPro:IPR002553 InterPro:IPR016024
InterPro:IPR017105 Pfam:PF01602 PIRSF:PIRSF037092 GO:GO:0005794
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0030117 GO:GO:0016192 GO:GO:0008565 CTD:8943
GeneTree:ENSGT00550000075067 KO:K12396 InterPro:IPR010474
Pfam:PF06375 EMBL:AADN02066738 IPI:IPI00819277
RefSeq:XP_003642902.1 UniGene:Gga.55207 Ensembl:ENSGALT00000041197
GeneID:420079 KEGG:gga:420079 ArrayExpress:E1BWK3 Uniprot:E1BWK3
Length = 1153
Score = 125 (49.1 bits), Expect = 0.00084, P = 0.00084
Identities = 47/188 (25%), Positives = 88/188 (46%)
Query: 86 PGVDVHTSEEYVKVGSGKKEDNALTKNVDSSRQRD---GENR---DLETKLKEDYVAKSN 139
PG+ + S++YVK+ ++ L K+ +Q+ G++ L T+ +ED +A ++
Sbjct: 716 PGMPM--SDQYVKLEEERRHKQKLEKDKKKKKQKKEKRGKHHRHNSLHTESEED-IAPAH 772
Query: 140 HRRTLKSEIRLKDRSPGNEKDRGNRGSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQ 199
H + E+ ++ P +E D+ L D+ KP SEKL P Q + +
Sbjct: 773 HVDIITEEMP-ENALPSDEDDKDPNDPYKALDIDL-----DKPLADSEKL-PVQRHRNAE 825
Query: 200 SI---------VDSRDEATKK----HSRDLTGKDRHADKSGEKSERESKRKHRNRDDEKN 246
++ V+ + + KK H K + +K +KS + K+KH+ +EK+
Sbjct: 826 ALKMPESEVPPVEKKSKKPKKKEKKHKEKEKDKGKKKEKEKKKSSKHKKKKHKKEKEEKS 885
Query: 247 RDKSAAKK 254
+DK +KK
Sbjct: 886 KDKKKSKK 893
>FB|FBgn0027567 [details] [associations]
symbol:CG8108 species:7227 "Drosophila melanogaster"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0046427 "positive regulation of
JAK-STAT cascade" evidence=IMP] InterPro:IPR015880 SMART:SM00355
EMBL:AE014296 GO:GO:0008270 GO:GO:0005622 GO:GO:0046427
GeneTree:ENSGT00690000102102 FlyBase:FBgn0027567 EMBL:BT023501
RefSeq:NP_648367.1 RefSeq:NP_729568.1 UniGene:Dm.7293
MINT:MINT-884114 STRING:Q9VT61 EnsemblMetazoa:FBtr0076339
EnsemblMetazoa:FBtr0076340 GeneID:39161 KEGG:dme:Dmel_CG8108
UCSC:CG8108-RA InParanoid:Q9VT61 OMA:DYRRTSS GenomeRNAi:39161
NextBio:812268 Uniprot:Q9VT61
Length = 919
Score = 108 (43.1 bits), Expect = 0.00086, Sum P(2) = 0.00086
Identities = 44/173 (25%), Positives = 76/173 (43%)
Query: 89 DVHTSEEYVKVGSGKKEDNALTKNVDSSRQRDGENRDLETKLKEDYVAKSNHRRTLKSEI 148
D E+ K GKK N N D S + +G + D + +D + +
Sbjct: 315 DDEKDEKSKKTSPGKKR-NKSANNEDKS-EAEGNDDDDDD---DDEHGDGDD----DDDK 365
Query: 149 RLKDRSPGNEK-DRGNRGSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQSIVDSRDE 207
L + P + K D + D K+K D K + K++ + G+ ++ D++D
Sbjct: 366 DLNESDPKSAKADDASDDEDVKVKGDGEDGDGDKSDEKAKSSVEKSGKKKDKD--DAKDS 423
Query: 208 ATKKHS---RDLTG-KDRHADKSGEKSERESKRKHRNRD-DEKNRDKSAAKKV 255
+KK S ++ T KD+ + SG+ +E +R R+RD D NR +S K +
Sbjct: 424 KSKKSSSTKKERTSRKDKDKESSGDDRSKE-RRSSRHRDEDHNNRKRSFIKLI 475
Score = 66 (28.3 bits), Expect = 0.00086, Sum P(2) = 0.00086
Identities = 21/62 (33%), Positives = 28/62 (45%)
Query: 373 EAAAKTPSPINRSPEKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTSTTQ 432
E AAK +P+ +SPEKK A S P+ AA+S +M + P T
Sbjct: 831 EGAAKENAPVAKSPEKKHAA---------SAPTTPTAKTTAAASQPAKMATPKPTAKAT- 880
Query: 433 KP 434
KP
Sbjct: 881 KP 882
>UNIPROTKB|E1C270 [details] [associations]
symbol:E1C270 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0048025 "negative regulation of mRNA
splicing, via spliceosome" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0005634 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GO:GO:0048025 GeneTree:ENSGT00700000104103 OMA:KPRSSHR
EMBL:AADN02019572 EMBL:AADN02019573 IPI:IPI00578317
ProteinModelPortal:E1C270 Ensembl:ENSGALT00000001462 Uniprot:E1C270
Length = 348
Score = 118 (46.6 bits), Expect = 0.00090, P = 0.00090
Identities = 45/148 (30%), Positives = 69/148 (46%)
Query: 117 RQRDGENRDLETKLKEDYVAKSNHRRTLKSEIRLKDRSPGNEKDRGNRG-SDTKLKADVT 175
R R R ++ + V+KS R KS R KDRS K R +R S +K K+D
Sbjct: 204 RSRSRSRRSRSSRSRSRSVSKSRSRS--KSRSRSKDRSRSRSKSRKSRSKSKSKPKSDRG 261
Query: 176 KETSSKPNVKSEKLIPSQGRSHNQSIVDSR--DEATKKHSRDLTGKDRHADKSGEKSERE 233
+ S+ KSEK S+ RS ++S ++ D +K SR + + + K+ E
Sbjct: 262 SRSHSRSKEKSEKS-RSRSRSRSRSPKENGKGDTKSKSRSRSRSRSNSPQQQPSAKARSE 320
Query: 234 S--KR---KHRNRDDEKNRDKSAAKKVD 256
S KR + R+R K+R +S + D
Sbjct: 321 SPPKRAASRSRSRSRSKSRSRSRSSSRD 348
>UNIPROTKB|P09406 [details] [associations]
symbol:snrnp70 "U1 small nuclear ribonucleoprotein 70 kDa"
species:8355 "Xenopus laevis" [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0043484
"regulation of RNA splicing" evidence=ISS] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 GO:GO:0016607 Gene3D:3.30.70.330 GO:GO:0005681
GO:GO:0003723 GO:GO:0043484 GO:GO:0000398 InterPro:IPR022023
Pfam:PF12220 EMBL:X12430 PIR:S02016 UniGene:Xl.5366
ProteinModelPortal:P09406 Xenbase:XB-GENE-992825 HOVERGEN:HBG012300
Uniprot:P09406
Length = 471
Score = 120 (47.3 bits), Expect = 0.00091, P = 0.00090
Identities = 35/142 (24%), Positives = 67/142 (47%)
Query: 116 SRQRDGENRDLE-TKLKEDYVAKSNHRRTLKSEIRLKDRSPGNEKDRGNRGSDTKLKADV 174
SR+++ R E +K K+ K N R K R ++R E+DR + +++A+V
Sbjct: 261 SREKEERKRTREKSKDKDKEKDKDNKDRDRKRRSRSRERK--RERDRDREKKEERVEAEV 318
Query: 175 TKETSSKPNVKSEKLIPSQGRSHNQSIVDSRDEATKKHSRDLTGKDRHADKSGEKSERES 234
+ + + + G Q + E ++ RD ++ DK ++ +R+
Sbjct: 319 PEADDAPQDDAQIGDLGIDGIELKQEPEEKSRERDRERDRDREKGEKDRDKDRDR-DRDR 377
Query: 235 KRKHRNRDDEKNRDKSAAKKVD 256
+R HR+RD EK+RD+ ++ D
Sbjct: 378 RRSHRDRDREKDRDRDRDRRRD 399
>UNIPROTKB|P82970 [details] [associations]
symbol:HMGN5 "High mobility group nucleosome-binding
domain-containing protein 5" species:9606 "Homo sapiens"
[GO:0000785 "chromatin" evidence=IEA] [GO:0031492 "nucleosomal DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0005654 "nucleoplasm" evidence=IEA] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0005634 "nucleus" evidence=IDA;NAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=NAS]
[GO:0003682 "chromatin binding" evidence=NAS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] InterPro:IPR000079
Pfam:PF01101 PRINTS:PR00925 PROSITE:PS00355 SMART:SM00527
GO:GO:0045893 GO:GO:0005654 GO:GO:0005730 GO:GO:0000785
GO:GO:0006357 GO:GO:0006351 GO:GO:0003682 GO:GO:0016568
EMBL:CH471104 GO:GO:0031492 OrthoDB:EOG4CZBHP EMBL:AF250329
EMBL:AF250330 EMBL:AK094058 EMBL:AL391294 EMBL:BC005342
IPI:IPI00006157 RefSeq:NP_110390.1 UniGene:Hs.282204
ProteinModelPortal:P82970 IntAct:P82970 STRING:P82970
PhosphoSite:P82970 DMDM:23396771 PaxDb:P82970 PRIDE:P82970
DNASU:79366 Ensembl:ENST00000358130 GeneID:79366 KEGG:hsa:79366
UCSC:uc004eee.1 CTD:79366 GeneCards:GC0XM080370 HGNC:HGNC:8013
HPA:HPA000511 MIM:300385 neXtProt:NX_P82970 PharmGKB:PA31789
eggNOG:NOG134182 HOGENOM:HOG000113856 HOVERGEN:HBG094823
InParanoid:P82970 OMA:KDDGGKD ChiTaRS:HMGN5 GenomeRNAi:79366
NextBio:68337 ArrayExpress:P82970 Bgee:P82970 CleanEx:HS_NSBP1
Genevestigator:P82970 GermOnline:ENSG00000198157 Uniprot:P82970
Length = 282
Score = 116 (45.9 bits), Expect = 0.00097, P = 0.00097
Identities = 54/224 (24%), Positives = 87/224 (38%)
Query: 41 RRKTKN--LSENIKEDAMDVSNIPGDCTIENVXXXXXXXXXXXXXXXPGVDVHTSEEYVK 98
+ KTK+ + ENI A V+ + +E P + +E V+
Sbjct: 44 KMKTKSDMMEENIDTSAQAVAETKQEAVVEEDYNENAKNGEAKITEAPA----SEKEIVE 99
Query: 99 VGSGKKEDNALTKNVDSSRQRDGENRDLETKLKEDYVAKSNHRRTLKSEIR-LKDRSPGN 157
V ED A K + E ++ E KED ++ + E + K G
Sbjct: 100 VKEENIED-ATEKGGEKKEAVAAEVKNEEEDQKEDEEDQNEEKGEAGKEDKDEKGEEDGK 158
Query: 158 EKDRGN-RGSDTKLKADVTKETSSKPNVKSEKLIPSQGRSHNQSIVDSRDEATKKHSRDL 216
E GN +G D K K D K K N + K +G + D ++ K + D
Sbjct: 159 EDKNGNEKGEDAKEKEDGKKGEDGKGNGEDGK---EKGEDEKEE-EDRKETGDGKENED- 213
Query: 217 TGKDRHADKSGE--KSERESKRKHRNRDDEKNRDKSAAK-KVDL 257
GK++ K G+ K + + K + ++DE ++ A K K DL
Sbjct: 214 -GKEKGDKKEGKDVKVKEDEKEREDGKEDEGGNEEEAGKEKEDL 256
>FB|FBgn0038492 [details] [associations]
symbol:Mur89F "Mucin related 89F" species:7227 "Drosophila
melanogaster" [GO:0008061 "chitin binding" evidence=IEA]
[GO:0006030 "chitin metabolic process" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0031012 "extracellular
matrix" evidence=ISM] [GO:0005201 "extracellular matrix structural
constituent" evidence=ISM] InterPro:IPR002557 Pfam:PF01607
PROSITE:PS50940 SMART:SM00494 EMBL:AE014297 GO:GO:0005576
eggNOG:NOG12793 GO:GO:0031012 GO:GO:0008061 GO:GO:0005201
CAZy:CBM14 Gene3D:2.170.140.10 SUPFAM:SSF57625 GO:GO:0006030
GeneTree:ENSGT00700000104174 RefSeq:NP_650611.1 UniGene:Dm.16781
ProteinModelPortal:Q9VEL9 SMR:Q9VEL9 PRIDE:Q9VEL9
EnsemblMetazoa:FBtr0083413 GeneID:42080 KEGG:dme:Dmel_CG4090
UCSC:CG4090-RA CTD:42080 FlyBase:FBgn0038492 InParanoid:Q9VEL9
OMA:QWNNNNQ OrthoDB:EOG46Q59B PhylomeDB:Q9VEL9 GenomeRNAi:42080
NextBio:827084 ArrayExpress:Q9VEL9 Bgee:Q9VEL9 Uniprot:Q9VEL9
Length = 2112
Score = 109 (43.4 bits), Expect = 0.00099, Sum P(2) = 0.00099
Identities = 55/216 (25%), Positives = 84/216 (38%)
Query: 696 SVNVVKYGDSNISTIQACEGNENTAS-AGVGQNLTNDETNEKGERLEEVTDHKSIKNNEL 754
S N N + Q+ ++N+ S G N ++ N+ + ++S NN+
Sbjct: 353 SSNNQNQSSQNSGSNQSSSSSQNSGSNQSSGSNQSSGN-NQSSSSNQSSGSNQSSNNNQS 411
Query: 755 EILNDSKEVMEAGEVNNVKDNRPASGTMGDEPSQLCELDTDMAVEYQARDSTSEIVSQGV 814
N S + + + NN N+P DE + + + + D A Y+ R + Q V
Sbjct: 412 SSSN-SNQTSSSSQ-NNSGSNKPVPTECEDENTYIPDKE-DCAKFYRCRQDKDGKLEQ-V 467
Query: 815 P---------TQVNTLKDSPCAHDDKVTCNIQLEHMSEEN----KSSAKEDLNLEEVNGN 861
P QV+ + D P D K CNIQ S N +SS N N
Sbjct: 468 PFTCGPGTVWNQVDKVCDLP-TEDQKKKCNIQSGSSSGSNNSGQQSSGSSSNNQGSSNNQ 526
Query: 862 SEAFTGASNEMGM---QSSAVENGDNENQ--DPNQG 892
S + +SN G Q S+ G + NQ NQG
Sbjct: 527 SSSNQSSSNNQGSSNNQGSSSNQGSSSNQGSSSNQG 562
Score = 72 (30.4 bits), Expect = 0.00099, Sum P(2) = 0.00099
Identities = 33/151 (21%), Positives = 55/151 (36%)
Query: 311 RTSYYDREHEGLPSHSTKISSGRQHSDIDSSRVTGNGLSGHYRRHDGSTSGLGGYSPRKR 370
+TSY + S ST S+ Q S SS T N S S++ S +
Sbjct: 231 QTSYQNSTTSSQQSSSTSSSNSSQSSSSTSSS-TSNSSSSQESSTSSSSNQSSSTSSNHQ 289
Query: 371 RTEAAAKTPSPINRSPEKKSAKWDVAPVETYSVPSNVHTSNQAASSNAHEMVSSDPVTST 430
+ + + N + S N +SNQ SS +++ S +++
Sbjct: 290 ESSSESSNNQESNSGSSSNQESSTSSSSNQGSSSQNAGSSNQNQSSGSNQSSGSSQSSNS 349
Query: 431 TQKPLAGISVSASLAKLNVSMDSVQLTQSNR 461
Q + S+ + N S S Q + SN+
Sbjct: 350 NQNSSNNQNQSSQNSGSNQSSSSSQNSGSNQ 380
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.310 0.127 0.356 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 943 854 0.00082 122 3 11 23 0.50 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 121
No. of states in DFA: 613 (65 KB)
Total size of DFA: 382 KB (2186 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 105.71u 0.09s 105.80t Elapsed: 00:00:07
Total cpu time: 105.75u 0.10s 105.85t Elapsed: 00:00:07
Start: Sat May 11 10:00:31 2013 End: Sat May 11 10:00:38 2013
WARNINGS ISSUED: 1