Query 002281
Match_columns 943
No_of_seqs 483 out of 2696
Neff 4.5
Searched_HMMs 29240
Date Mon Mar 25 19:58:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002281.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/002281hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3pfn_A NAD kinase; structural 100.0 5.4E-60 1.8E-64 522.5 24.4 254 671-934 21-306 (365)
2 3afo_A NADH kinase POS5; alpha 100.0 5E-56 1.7E-60 494.8 23.2 269 660-934 11-288 (388)
3 1z0s_A Probable inorganic poly 100.0 2.2E-49 7.6E-54 424.4 19.3 208 683-931 19-229 (278)
4 1u0t_A Inorganic polyphosphate 100.0 1.5E-45 5.3E-50 397.8 21.2 235 689-933 3-246 (307)
5 2an1_A Putative kinase; struct 100.0 1.1E-43 3.8E-48 378.4 21.7 229 690-933 5-234 (292)
6 2i2c_A Probable inorganic poly 100.0 1.3E-42 4.6E-47 369.1 26.2 202 692-932 2-211 (272)
7 1yt5_A Inorganic polyphosphate 100.0 3.3E-42 1.1E-46 363.5 22.2 168 753-933 39-206 (258)
8 1ywf_A Phosphotyrosine protein 99.9 5.4E-25 1.8E-29 237.3 14.5 171 242-426 26-282 (296)
9 1xri_A AT1G05000; structural g 99.8 2.4E-20 8.1E-25 179.2 13.2 117 268-389 14-134 (151)
10 2f46_A Hypothetical protein; s 99.8 5.6E-18 1.9E-22 165.4 14.1 118 267-387 22-141 (156)
11 4erc_A Dual specificity protei 99.7 8.1E-17 2.8E-21 153.4 13.3 116 266-390 13-132 (150)
12 2qv7_A Diacylglycerol kinase D 99.7 5.7E-17 1.9E-21 176.3 6.7 210 690-924 24-264 (337)
13 2img_A Dual specificity protei 99.7 8.5E-16 2.9E-20 145.9 13.8 113 267-388 15-131 (151)
14 2i6j_A Ssoptp, sulfolobus solf 99.6 9.6E-16 3.3E-20 147.6 11.7 119 267-387 7-130 (161)
15 3rgo_A Protein-tyrosine phosph 99.6 3E-15 1E-19 143.5 14.5 125 267-393 7-136 (157)
16 1yz4_A DUSP15, dual specificit 99.6 1.6E-14 5.3E-19 140.6 13.0 111 267-389 13-127 (160)
17 2e0t_A Dual specificity phosph 99.6 5.5E-15 1.9E-19 141.8 8.9 111 267-383 7-122 (151)
18 3f81_A Dual specificity protei 99.6 1.4E-14 4.8E-19 143.5 11.6 129 244-388 24-157 (183)
19 1zzw_A Dual specificity protei 99.5 4.1E-14 1.4E-18 135.7 14.1 113 267-388 9-125 (149)
20 1rxd_A Protein tyrosine phosph 99.5 4.8E-14 1.6E-18 134.9 12.9 114 267-388 16-137 (159)
21 3s4o_A Protein tyrosine phosph 99.5 8.7E-14 3E-18 134.1 13.6 109 268-384 24-147 (167)
22 1fpz_A Cyclin-dependent kinase 99.5 4.9E-14 1.7E-18 143.5 11.6 108 276-384 60-172 (212)
23 1wrm_A Dual specificity phosph 99.5 1.2E-13 4.2E-18 135.4 12.3 106 267-384 12-121 (165)
24 1ohe_A CDC14B, CDC14B2 phospha 99.5 8.5E-13 2.9E-17 145.6 18.9 104 276-388 207-311 (348)
25 3ezz_A Dual specificity protei 99.5 1.1E-13 3.7E-18 132.1 9.8 115 267-392 9-127 (144)
26 2oud_A Dual specificity protei 99.4 7.6E-13 2.6E-17 131.5 13.9 113 267-388 13-129 (177)
27 2hcm_A Dual specificity protei 99.4 3.6E-13 1.2E-17 131.6 11.0 107 267-384 17-127 (164)
28 2hxp_A Dual specificity protei 99.4 3.3E-13 1.1E-17 131.3 10.2 107 267-383 11-122 (155)
29 2nt2_A Protein phosphatase sli 99.4 4E-13 1.4E-17 128.5 10.0 104 267-382 9-117 (145)
30 2r0b_A Serine/threonine/tyrosi 99.4 5E-13 1.7E-17 128.6 10.6 110 267-383 11-127 (154)
31 2bon_A Lipid kinase; DAG kinas 99.4 4.3E-14 1.5E-18 153.7 2.6 221 690-933 29-286 (332)
32 3s4e_A Dual specificity protei 99.4 4.7E-13 1.6E-17 128.1 9.5 111 267-388 9-123 (144)
33 3rz2_A Protein tyrosine phosph 99.4 5.9E-13 2E-17 133.4 10.6 113 268-388 38-158 (189)
34 2wgp_A Dual specificity protei 99.4 4.5E-13 1.6E-17 135.0 9.4 106 267-383 31-140 (190)
35 3gxh_A Putative phosphatase (D 99.4 2.5E-12 8.5E-17 126.0 13.5 119 243-379 10-128 (157)
36 2y96_A Dual specificity phosph 99.4 9.7E-13 3.3E-17 135.9 11.0 115 268-386 60-179 (219)
37 2esb_A Dual specificity protei 99.4 3.6E-12 1.2E-16 128.1 13.6 106 267-383 25-134 (188)
38 2pq5_A Dual specificity protei 99.4 3.3E-12 1.1E-16 130.2 12.2 112 268-383 52-168 (205)
39 1yn9_A BVP, polynucleotide 5'- 99.3 1.8E-12 6.2E-17 127.2 9.5 96 285-386 53-153 (169)
40 3emu_A Leucine rich repeat and 99.3 2.6E-12 8.8E-17 126.2 10.3 113 267-390 15-131 (161)
41 2g6z_A Dual specificity protei 99.3 3.9E-12 1.3E-16 131.4 9.0 107 267-384 11-121 (211)
42 2q05_A Late protein H1, dual s 99.3 7.8E-12 2.7E-16 126.5 11.0 108 267-389 54-173 (195)
43 3nme_A Ptpkis1 protein, SEX4 g 99.2 1.1E-11 3.6E-16 133.7 9.2 122 267-389 18-149 (294)
44 2c46_A MRNA capping enzyme; ph 99.2 9.1E-11 3.1E-15 123.2 11.1 106 275-386 67-181 (241)
45 3cm3_A Late protein H1, dual s 99.1 6.9E-11 2.3E-15 117.0 8.4 106 267-387 37-154 (176)
46 2j16_A SDP-1, tyrosine-protein 98.8 5.2E-09 1.8E-13 105.7 7.9 103 267-384 50-155 (182)
47 3f41_A Phytase; tandem repeat, 98.8 1.7E-09 5.7E-14 126.8 4.6 210 161-392 52-281 (629)
48 3mmj_A MYO-inositol hexaphosph 98.7 5.5E-08 1.9E-12 106.2 10.8 208 161-391 29-260 (314)
49 3f41_A Phytase; tandem repeat, 98.5 2.6E-07 9.1E-12 108.4 10.4 83 311-393 493-579 (629)
50 1d5r_A Phosphoinositide phosph 98.4 3.9E-07 1.3E-11 99.3 9.6 87 287-383 57-149 (324)
51 3v0d_A Voltage-sensor containi 98.3 2E-06 6.8E-11 94.9 10.9 95 280-384 56-158 (339)
52 3n0a_A Tyrosine-protein phosph 98.2 3.6E-06 1.2E-10 93.6 10.9 104 268-384 43-154 (361)
53 3s40_A Diacylglycerol kinase; 97.7 5.8E-05 2E-09 81.1 8.1 111 687-812 5-124 (304)
54 1g4w_R Protein tyrosine phosph 97.2 0.00069 2.4E-08 75.7 8.6 65 317-381 271-350 (383)
55 1fpr_A Protein-tyrosine phosph 97.1 0.00057 1.9E-08 73.0 6.9 45 324-368 175-225 (284)
56 2hc1_A Receptor-type tyrosine- 97.0 0.0014 4.8E-08 70.4 9.2 46 325-370 190-241 (291)
57 3b7o_A Tyrosine-protein phosph 96.9 0.0013 4.3E-08 71.6 7.5 46 323-368 209-260 (316)
58 1wch_A Protein tyrosine phosph 96.9 0.0021 7E-08 70.0 8.9 45 325-369 215-261 (315)
59 2b49_A Protein tyrosine phosph 96.8 0.0023 7.9E-08 68.6 8.5 45 324-368 183-230 (287)
60 3m4u_A Tyrosine specific prote 96.8 0.0018 6E-08 70.0 7.5 43 327-369 200-244 (306)
61 4grz_A Tyrosine-protein phosph 96.8 0.002 7E-08 68.7 7.9 42 328-369 181-228 (288)
62 2cm2_A Tyrosine-protein phosph 96.8 0.0025 8.5E-08 68.9 8.6 42 326-367 187-234 (304)
63 4az1_A Tyrosine specific prote 96.7 0.0021 7.3E-08 69.2 7.5 42 328-369 198-241 (302)
64 1p15_A Protein-tyrosine phosph 96.7 0.0011 3.7E-08 69.6 5.0 46 325-370 149-199 (253)
65 1jln_A STEP-like ptpase, prote 96.7 0.0019 6.6E-08 69.6 6.9 45 325-369 194-244 (297)
66 1l8k_A T-cell protein-tyrosine 96.7 0.0031 1.1E-07 68.5 8.3 57 327-383 183-251 (314)
67 2oc3_A Tyrosine-protein phosph 96.6 0.0038 1.3E-07 67.5 8.2 41 328-368 203-247 (303)
68 2i75_A Tyrosine-protein phosph 96.6 0.0036 1.2E-07 68.4 8.0 43 325-367 211-257 (320)
69 1yfo_A D1, receptor protein ty 96.6 0.0031 1.1E-07 68.1 7.3 44 326-369 200-247 (302)
70 2gjt_A Receptor-type tyrosine- 96.6 0.0026 8.8E-08 68.5 6.6 45 324-368 187-237 (295)
71 2cjz_A Human protein tyrosine 96.5 0.0038 1.3E-07 67.7 7.8 43 327-369 204-253 (305)
72 2p6x_A Tyrosine-protein phosph 96.5 0.003 1E-07 68.6 6.5 43 326-368 195-241 (309)
73 1zc0_A Tyrosine-protein phosph 96.5 0.0036 1.2E-07 68.0 7.1 46 325-370 205-256 (309)
74 2bzl_A Tyrosine-protein phosph 96.5 0.0073 2.5E-07 65.9 9.4 24 346-369 251-274 (325)
75 3i36_A Vascular protein tyrosi 96.4 0.0034 1.2E-07 69.1 6.5 44 326-369 210-259 (342)
76 2ooq_A Receptor-type tyrosine- 96.4 0.0038 1.3E-07 66.9 6.6 46 325-370 186-235 (286)
77 2i1y_A Receptor-type tyrosine- 96.4 0.0035 1.2E-07 67.7 6.3 38 331-368 205-245 (301)
78 1lyv_A Protein-tyrosine phosph 96.3 0.0076 2.6E-07 65.2 8.6 25 346-370 233-257 (306)
79 2b3o_A Tyrosine-protein phosph 96.2 0.0084 2.9E-07 69.2 8.6 43 327-369 420-468 (532)
80 2h4v_A Receptor-type tyrosine- 96.2 0.0088 3E-07 65.2 8.3 45 326-370 221-269 (320)
81 4i8n_A Tyrosine-protein phosph 96.2 0.0066 2.3E-07 67.1 7.3 38 331-368 221-263 (354)
82 3s3e_A Tyrosine-protein phosph 96.2 0.0057 2E-07 66.3 6.7 40 331-370 216-258 (307)
83 3ps5_A Tyrosine-protein phosph 96.2 0.01 3.4E-07 69.7 9.1 38 331-368 425-467 (595)
84 1ygr_A CD45 protein tyrosine p 96.1 0.011 3.8E-07 69.5 9.3 45 326-370 504-562 (610)
85 4ge6_A Tyrosine-protein phosph 96.1 0.0059 2E-07 66.3 6.2 23 346-368 232-254 (314)
86 2shp_A SHP-2, SYP, SHPTP-2; ty 95.8 0.012 4.2E-07 67.8 7.3 43 327-369 426-474 (525)
87 2jjd_A Receptor-type tyrosine- 95.8 0.013 4.5E-07 68.8 7.6 41 327-367 199-243 (599)
88 1lar_A Protein (LAR); tyrosine 95.5 0.017 5.7E-07 67.6 7.1 45 326-370 473-523 (575)
89 1ygr_A CD45 protein tyrosine p 95.3 0.022 7.5E-07 67.0 7.5 45 326-370 198-246 (610)
90 2jjd_A Receptor-type tyrosine- 95.2 0.02 7E-07 67.2 6.8 43 327-369 493-540 (599)
91 1lar_A Protein (LAR); tyrosine 95.2 0.035 1.2E-06 64.9 8.7 45 325-369 183-231 (575)
92 2nlk_A Protein tyrosine phosph 93.9 0.039 1.3E-06 65.2 5.0 25 345-369 517-541 (627)
93 2nlk_A Protein tyrosine phosph 93.9 0.066 2.3E-06 63.3 6.8 38 332-369 210-250 (627)
94 3i2v_A Adenylyltransferase and 92.1 0.13 4.3E-06 47.1 4.4 85 274-370 2-94 (127)
95 1vee_A Proline-rich protein fa 91.2 0.21 7.2E-06 46.9 5.0 78 274-370 6-96 (134)
96 1gmx_A GLPE protein; transfera 89.7 0.88 3E-05 40.8 7.6 74 275-370 7-80 (108)
97 3d1p_A Putative thiosulfate su 89.4 0.67 2.3E-05 43.4 6.8 85 274-374 24-116 (139)
98 1tq1_A AT5G66040, senescence-a 88.6 0.4 1.4E-05 44.8 4.6 82 274-370 19-104 (129)
99 3flh_A Uncharacterized protein 86.1 0.76 2.6E-05 42.5 4.9 74 274-368 16-93 (124)
100 1urh_A 3-mercaptopyruvate sulf 85.7 1.5 5.2E-05 45.7 7.6 96 274-374 153-255 (280)
101 2jtq_A Phage shock protein E; 85.3 0.99 3.4E-05 38.8 5.0 39 334-374 28-66 (85)
102 1wv9_A Rhodanese homolog TT165 84.7 0.36 1.2E-05 42.5 1.9 75 275-374 4-78 (94)
103 3hzu_A Thiosulfate sulfurtrans 83.0 0.84 2.9E-05 49.2 4.3 92 275-374 181-285 (318)
104 3iwh_A Rhodanese-like domain p 82.8 0.45 1.5E-05 43.3 1.8 76 275-373 4-80 (103)
105 3gk5_A Uncharacterized rhodane 82.7 0.52 1.8E-05 42.7 2.2 71 275-369 6-76 (108)
106 1rhs_A Sulfur-substituted rhod 81.5 2.8 9.7E-05 44.2 7.6 96 274-374 161-265 (296)
107 2fsx_A RV0390, COG0607: rhodan 81.0 1 3.5E-05 42.8 3.6 88 274-370 6-102 (148)
108 1qxn_A SUD, sulfide dehydrogen 80.1 2.9 0.0001 39.4 6.4 77 274-370 24-104 (137)
109 3aay_A Putative thiosulfate su 79.6 2.6 8.7E-05 43.8 6.4 54 320-374 194-252 (277)
110 2hhg_A Hypothetical protein RP 78.9 3.5 0.00012 38.3 6.4 76 274-370 23-108 (139)
111 4a3s_A 6-phosphofructokinase; 77.4 1.2 4E-05 48.9 3.1 51 755-808 93-153 (319)
112 3olh_A MST, 3-mercaptopyruvate 77.3 2.8 9.7E-05 44.7 6.0 95 275-374 177-279 (302)
113 2k0z_A Uncharacterized protein 76.3 3.6 0.00012 37.1 5.6 61 290-370 18-78 (110)
114 3f4a_A Uncharacterized protein 74.7 3.9 0.00013 40.3 5.8 84 274-370 32-127 (169)
115 3aay_A Putative thiosulfate su 74.3 7.6 0.00026 40.2 8.2 83 275-368 8-98 (277)
116 1zxx_A 6-phosphofructokinase; 73.6 1.7 6E-05 47.6 3.2 43 754-797 92-144 (319)
117 1pfk_A Phosphofructokinase; tr 73.5 1.8 6E-05 47.6 3.2 52 754-808 93-154 (320)
118 3g5j_A Putative ATP/GTP bindin 73.3 3.3 0.00011 37.8 4.5 25 348-374 90-115 (134)
119 3eme_A Rhodanese-like domain p 72.6 1.1 3.6E-05 40.0 1.0 73 275-369 4-77 (103)
120 3ilm_A ALR3790 protein; rhodan 71.7 5.9 0.0002 37.6 6.1 77 275-374 2-81 (141)
121 3foj_A Uncharacterized protein 71.6 0.96 3.3E-05 40.1 0.5 73 275-369 4-77 (100)
122 1e0c_A Rhodanese, sulfurtransf 71.0 4.5 0.00016 41.8 5.5 95 275-374 149-248 (271)
123 2yf0_A Myotubularin-related pr 70.6 3.9 0.00013 47.6 5.3 26 345-370 327-352 (512)
124 1zsq_A Myotubularin-related pr 70.3 4.1 0.00014 47.6 5.4 26 345-370 339-364 (528)
125 3hno_A Pyrophosphate-dependent 69.9 2.2 7.4E-05 48.5 3.0 44 754-797 103-161 (419)
126 3l7n_A Putative uncharacterize 69.4 4.5 0.00016 41.5 5.1 78 692-789 2-94 (236)
127 1e0c_A Rhodanese, sulfurtransf 67.7 7.6 0.00026 40.1 6.4 85 275-370 11-104 (271)
128 2j6p_A SB(V)-AS(V) reductase; 67.1 24 0.00082 33.6 9.3 75 275-365 7-86 (152)
129 1uar_A Rhodanese; sulfurtransf 67.1 6.4 0.00022 40.9 5.7 96 275-374 148-259 (285)
130 4f67_A UPF0176 protein LPG2838 66.1 3.8 0.00013 43.7 3.8 171 180-370 24-203 (265)
131 1lw3_A Myotubularin-related pr 66.0 5.5 0.00019 47.6 5.4 26 345-370 411-436 (657)
132 3bfj_A 1,3-propanediol oxidore 63.8 4.9 0.00017 44.3 4.3 88 690-787 33-142 (387)
133 2hig_A 6-phospho-1-fructokinas 63.6 3 0.0001 48.3 2.6 52 755-808 189-255 (487)
134 2f48_A Diphosphate--fructose-6 61.9 3.4 0.00012 48.6 2.6 53 754-808 165-234 (555)
135 1uar_A Rhodanese; sulfurtransf 61.3 11 0.00036 39.3 6.0 79 275-364 10-96 (285)
136 1vlj_A NADH-dependent butanol 61.2 5.4 0.00019 44.5 4.0 87 691-787 44-151 (407)
137 3lua_A Response regulator rece 60.5 43 0.0015 29.8 9.2 103 690-812 4-128 (140)
138 1oi4_A Hypothetical protein YH 60.4 22 0.00076 35.1 7.9 103 683-789 15-128 (193)
139 3gt7_A Sensor protein; structu 60.2 44 0.0015 30.6 9.5 103 689-812 6-128 (154)
140 3ics_A Coenzyme A-disulfide re 59.6 6.1 0.00021 45.4 4.2 76 275-374 491-566 (588)
141 2wlr_A Putative thiosulfate su 59.5 9.6 0.00033 42.4 5.6 28 345-374 356-383 (423)
142 1rrm_A Lactaldehyde reductase; 58.4 6.3 0.00021 43.4 3.9 88 690-787 31-140 (386)
143 1urh_A 3-mercaptopyruvate sulf 58.4 24 0.00081 36.6 8.1 96 275-374 6-112 (280)
144 1o2d_A Alcohol dehydrogenase, 57.7 7 0.00024 43.0 4.1 75 691-775 41-117 (371)
145 2gru_A 2-deoxy-scyllo-inosose 57.3 15 0.00051 40.5 6.6 92 690-787 34-128 (368)
146 3hix_A ALR3790 protein; rhodan 55.9 11 0.00039 33.5 4.5 28 345-374 50-77 (106)
147 3ox4_A Alcohol dehydrogenase 2 55.9 4.3 0.00015 45.0 2.0 88 690-787 31-138 (383)
148 2o6l_A UDP-glucuronosyltransfe 55.2 12 0.0004 35.4 4.7 54 754-811 85-154 (170)
149 1oj7_A Hypothetical oxidoreduc 54.7 10 0.00035 42.2 4.8 73 691-775 51-125 (408)
150 3nhv_A BH2092 protein; alpha-b 54.5 19 0.00063 34.2 6.0 77 274-370 17-96 (144)
151 3tsa_A SPNG, NDP-rhamnosyltran 54.1 60 0.0021 34.3 10.5 59 749-811 280-356 (391)
152 1xah_A Sadhqs, 3-dehydroquinat 54.1 7.8 0.00027 42.3 3.7 89 691-787 32-124 (354)
153 3ce9_A Glycerol dehydrogenase; 52.8 15 0.0005 40.0 5.6 82 690-787 34-120 (354)
154 3hdv_A Response regulator; PSI 52.7 49 0.0017 29.1 8.2 103 690-812 7-128 (136)
155 3hzu_A Thiosulfate sulfurtrans 52.2 25 0.00085 37.7 7.2 89 275-374 42-137 (318)
156 3op3_A M-phase inducer phospha 51.9 14 0.00046 38.1 4.9 78 274-370 58-147 (216)
157 3okf_A 3-dehydroquinate syntha 51.9 18 0.00061 40.6 6.2 92 689-787 61-157 (390)
158 3uhj_A Probable glycerol dehyd 50.2 8 0.00027 43.1 3.0 84 691-787 53-138 (387)
159 3o8l_A 6-phosphofructokinase, 50.1 7.1 0.00024 47.5 2.8 54 754-809 488-557 (762)
160 3ewn_A THIJ/PFPI family protei 49.8 36 0.0012 35.6 7.8 99 686-789 20-127 (253)
161 3gl9_A Response regulator; bet 49.7 90 0.0031 27.2 9.4 99 691-810 3-121 (122)
162 2pln_A HP1043, response regula 49.2 56 0.0019 28.8 8.0 102 686-811 14-133 (137)
163 3snk_A Response regulator CHEY 48.7 87 0.003 27.6 9.2 100 690-811 14-133 (135)
164 3hl0_A Maleylacetate reductase 48.5 10 0.00036 41.6 3.6 84 690-787 34-119 (353)
165 3opy_A 6-phosphofructo-1-kinas 47.5 8 0.00027 48.2 2.6 52 755-808 688-755 (989)
166 1rhs_A Sulfur-substituted rhod 47.5 47 0.0016 34.8 8.3 96 274-374 9-120 (296)
167 3opy_B 6-phosphofructo-1-kinas 47.4 8.2 0.00028 48.0 2.7 54 754-809 661-730 (941)
168 3jzd_A Iron-containing alcohol 46.9 11 0.00037 41.6 3.4 84 690-787 36-121 (358)
169 3o8o_A 6-phosphofructokinase s 46.0 8.1 0.00028 47.2 2.4 53 754-808 482-550 (787)
170 3cz5_A Two-component response 45.7 1.2E+02 0.004 27.3 9.8 102 690-812 5-126 (153)
171 3o8o_B 6-phosphofructokinase s 45.2 7.6 0.00026 47.3 1.9 52 755-808 484-551 (766)
172 3o8l_A 6-phosphofructokinase, 45.1 11 0.00037 45.9 3.2 55 754-810 108-194 (762)
173 3kto_A Response regulator rece 44.4 1.1E+02 0.0036 27.1 9.1 101 690-812 6-127 (136)
174 2iss_D Glutamine amidotransfer 44.3 23 0.00078 35.4 5.0 35 754-788 56-100 (208)
175 1t3k_A Arath CDC25, dual-speci 44.3 13 0.00045 35.6 3.1 73 275-365 30-103 (152)
176 4dad_A Putative pilus assembly 43.8 46 0.0016 29.8 6.6 106 687-812 17-142 (146)
177 1yt8_A Thiosulfate sulfurtrans 43.6 31 0.0011 39.7 6.6 75 274-370 378-452 (539)
178 1ujn_A Dehydroquinate synthase 43.2 20 0.00068 39.2 4.7 88 690-787 28-118 (348)
179 2wlr_A Putative thiosulfate su 43.1 36 0.0012 37.8 6.9 83 275-369 126-224 (423)
180 3clh_A 3-dehydroquinate syntha 43.0 8.6 0.00029 42.0 1.8 90 690-787 26-119 (343)
181 3h5i_A Response regulator/sens 42.4 86 0.0029 27.9 8.2 99 690-810 5-123 (140)
182 1okg_A Possible 3-mercaptopyru 42.3 33 0.0011 37.9 6.3 82 275-362 16-110 (373)
183 1ta9_A Glycerol dehydrogenase; 41.0 31 0.0011 39.2 6.0 82 691-787 92-177 (450)
184 3t6k_A Response regulator rece 40.8 1.1E+02 0.0038 27.2 8.6 102 690-812 4-125 (136)
185 3tn4_A Phosphotriesterase; lac 40.8 86 0.0029 34.7 9.4 41 278-320 87-127 (360)
186 3m3p_A Glutamine amido transfe 40.8 14 0.00049 38.7 3.0 36 754-789 47-92 (250)
187 3o8o_A 6-phosphofructokinase s 40.3 14 0.00049 45.0 3.3 44 754-797 98-173 (787)
188 3otg_A CALG1; calicheamicin, T 40.2 92 0.0031 33.0 9.3 60 748-811 301-376 (412)
189 4e7p_A Response regulator; DNA 40.2 1.7E+02 0.0059 26.2 10.0 106 686-812 16-141 (150)
190 3opy_B 6-phosphofructo-1-kinas 39.3 15 0.00051 45.7 3.2 55 754-810 275-361 (941)
191 3opy_A 6-phosphofructo-1-kinas 39.2 15 0.00051 45.8 3.2 55 754-810 303-389 (989)
192 1ohe_A CDC14B, CDC14B2 phospha 38.8 50 0.0017 36.3 7.1 60 326-385 50-119 (348)
193 3qbe_A 3-dehydroquinate syntha 38.7 26 0.00088 39.0 4.8 89 691-787 44-137 (368)
194 3f6p_A Transcriptional regulat 38.4 1.1E+02 0.0036 26.6 7.9 97 691-810 3-118 (120)
195 3fij_A LIN1909 protein; 11172J 38.1 19 0.00065 37.4 3.4 36 753-788 59-117 (254)
196 3o8o_B 6-phosphofructokinase s 38.0 16 0.00056 44.4 3.3 43 755-797 98-172 (766)
197 3f5d_A Protein YDEA; unknow pr 37.6 28 0.00094 35.2 4.4 95 690-789 3-103 (206)
198 2p6p_A Glycosyl transferase; X 37.2 29 0.00099 36.8 4.8 58 750-811 274-347 (384)
199 2eg4_A Probable thiosulfate su 36.8 38 0.0013 34.1 5.4 71 290-375 8-87 (230)
200 1hzm_A Dual specificity protei 36.7 26 0.0009 32.8 3.9 72 274-359 17-104 (154)
201 2qr3_A Two-component system re 36.6 1.9E+02 0.0066 25.1 9.5 100 691-812 4-127 (140)
202 1nvm_A HOA, 4-hydroxy-2-oxoval 36.3 47 0.0016 36.2 6.4 81 277-358 123-205 (345)
203 1o1y_A Conserved hypothetical 36.3 25 0.00086 36.2 4.0 80 690-789 12-103 (239)
204 3noq_A THIJ/PFPI family protei 36.2 80 0.0027 32.3 7.7 96 689-789 4-107 (231)
205 3lte_A Response regulator; str 35.8 1.7E+02 0.0057 25.4 8.8 103 689-812 5-126 (132)
206 3n53_A Response regulator rece 33.6 1.4E+02 0.0048 26.3 8.1 58 755-812 46-123 (140)
207 3tp9_A Beta-lactamase and rhod 33.3 12 0.00042 42.0 1.1 28 345-374 425-452 (474)
208 3grc_A Sensor protein, kinase; 33.1 1.3E+02 0.0044 26.5 7.7 102 690-812 6-128 (140)
209 3nhm_A Response regulator; pro 32.9 1.8E+02 0.0062 25.1 8.6 101 690-812 4-123 (133)
210 3eod_A Protein HNR; response r 32.7 2.4E+02 0.0082 24.3 9.7 102 689-812 6-127 (130)
211 3eul_A Possible nitrate/nitrit 32.6 1.5E+02 0.005 26.7 8.1 57 755-812 61-136 (152)
212 1yt8_A Thiosulfate sulfurtrans 32.4 53 0.0018 37.7 6.2 80 274-374 266-347 (539)
213 4fzr_A SSFS6; structural genom 32.1 30 0.001 36.9 3.9 58 750-811 295-368 (398)
214 3hbm_A UDP-sugar hydrolase; PS 32.0 56 0.0019 34.8 5.9 34 748-786 218-251 (282)
215 1okg_A Possible 3-mercaptopyru 31.3 28 0.00094 38.5 3.5 26 347-374 246-271 (373)
216 3ia7_A CALG4; glycosysltransfe 30.9 1.7E+02 0.0057 30.7 9.4 57 751-811 293-366 (402)
217 3c97_A Signal transduction his 30.5 1.7E+02 0.0058 25.8 8.1 58 755-812 54-131 (140)
218 2vsw_A Dual specificity protei 30.4 43 0.0015 31.4 4.2 27 272-298 3-31 (153)
219 1sg6_A Pentafunctional AROM po 30.4 32 0.0011 38.1 3.9 31 756-787 106-139 (393)
220 1dz3_A Stage 0 sporulation pro 30.4 2.3E+02 0.0078 24.5 8.8 58 755-812 48-124 (130)
221 4e08_A DJ-1 beta; flavodoxin-l 30.0 1.3E+02 0.0043 29.3 7.7 95 690-789 5-110 (190)
222 3rhg_A Putative phophotriester 29.5 1.3E+02 0.0046 33.1 8.6 19 277-295 78-96 (365)
223 3klo_A Transcriptional regulat 29.5 1.8E+02 0.0062 28.3 8.8 59 755-813 54-131 (225)
224 3hdg_A Uncharacterized protein 29.0 1.3E+02 0.0044 26.4 7.0 101 690-812 7-126 (137)
225 1srr_A SPO0F, sporulation resp 29.0 2.4E+02 0.0084 24.0 8.7 56 755-811 47-121 (124)
226 1c25_A CDC25A; hydrolase, cell 28.8 1.2E+02 0.0041 28.6 7.1 77 274-369 24-111 (161)
227 3hv2_A Response regulator/HD d 28.8 2.2E+02 0.0074 25.6 8.6 100 690-811 14-133 (153)
228 3cnb_A DNA-binding response re 28.6 2E+02 0.0069 25.0 8.2 58 755-812 54-131 (143)
229 3l18_A Intracellular protease 27.9 1.4E+02 0.0047 28.3 7.4 95 690-789 2-105 (168)
230 2yjn_A ERYCIII, glycosyltransf 27.5 43 0.0015 36.6 4.2 58 750-811 330-403 (441)
231 3rsc_A CALG2; TDP, enediyne, s 27.2 1.3E+02 0.0043 32.1 7.7 57 751-811 309-381 (415)
232 2ywj_A Glutamine amidotransfer 27.1 85 0.0029 30.4 5.8 35 754-788 36-77 (186)
233 2qsj_A DNA-binding response re 26.9 2.7E+02 0.0091 24.9 8.9 58 755-813 50-126 (154)
234 3cg0_A Response regulator rece 26.0 2.9E+02 0.0099 24.0 8.7 56 755-812 54-129 (140)
235 3olh_A MST, 3-mercaptopyruvate 25.8 2.7E+02 0.0091 29.4 9.8 93 274-368 23-130 (302)
236 2qxy_A Response regulator; reg 25.7 3E+02 0.01 24.0 8.9 101 690-812 4-122 (142)
237 3tp9_A Beta-lactamase and rhod 25.4 88 0.003 35.0 6.3 67 274-362 274-340 (474)
238 2f9f_A First mannosyl transfer 25.2 1.4E+02 0.0048 28.1 6.9 58 751-812 93-163 (177)
239 3f6c_A Positive transcription 24.8 2.1E+02 0.0071 24.8 7.5 58 755-813 46-122 (134)
240 3gra_A Transcriptional regulat 24.7 1.3E+02 0.0044 30.0 6.7 37 753-789 69-111 (202)
241 3kht_A Response regulator; PSI 24.6 2.3E+02 0.008 24.9 7.9 56 755-810 51-127 (144)
242 3jte_A Response regulator rece 24.4 2.9E+02 0.0099 24.2 8.5 102 691-812 4-124 (143)
243 1qb0_A Protein (M-phase induce 24.1 1.1E+02 0.0036 30.8 6.0 77 274-369 45-133 (211)
244 3ilh_A Two component response 23.6 3.1E+02 0.011 23.9 8.5 59 754-812 59-140 (146)
245 3m6m_D Sensory/regulatory prot 23.2 2.6E+02 0.0088 25.0 8.0 101 690-811 14-136 (143)
246 3mgk_A Intracellular protease/ 23.0 1.2E+02 0.004 30.5 6.1 96 689-789 3-107 (211)
247 3q9s_A DNA-binding response re 23.0 2.5E+02 0.0084 28.2 8.6 100 690-812 37-155 (249)
248 1qkk_A DCTD, C4-dicarboxylate 22.9 4.1E+02 0.014 23.7 10.6 100 690-811 3-121 (155)
249 3cg4_A Response regulator rece 22.5 2.3E+02 0.0078 24.8 7.4 101 689-810 6-126 (142)
250 3eqz_A Response regulator; str 22.4 3.5E+02 0.012 23.2 8.5 56 756-812 47-126 (135)
251 1rrv_A Glycosyltransferase GTF 22.2 65 0.0022 34.8 4.3 56 749-808 296-367 (416)
252 2iyf_A OLED, oleandomycin glyc 22.0 68 0.0023 34.5 4.4 57 751-811 295-367 (430)
253 1mb3_A Cell division response 21.9 3.6E+02 0.012 22.7 8.9 58 755-812 45-122 (124)
254 3cfy_A Putative LUXO repressor 21.8 4.1E+02 0.014 23.4 9.0 99 691-811 5-122 (137)
255 1tvm_A PTS system, galactitol- 21.6 1.3E+02 0.0045 27.5 5.7 97 683-810 14-112 (113)
256 1dbw_A Transcriptional regulat 21.2 3.9E+02 0.013 22.8 10.2 57 755-812 47-122 (126)
257 3er6_A Putative transcriptiona 21.0 2.1E+02 0.0072 28.5 7.5 105 687-795 5-129 (209)
258 2iya_A OLEI, oleandomycin glyc 20.5 76 0.0026 34.2 4.4 57 751-811 317-389 (424)
259 3h4t_A Glycosyltransferase GTF 20.4 69 0.0023 34.7 4.0 57 750-810 279-351 (404)
260 2qzj_A Two-component response 20.3 3.5E+02 0.012 23.8 8.1 55 755-811 48-121 (136)
261 1erc_A Pheromone ER-1; NMR {Eu 20.2 47 0.0016 25.7 1.8 17 353-369 18-34 (40)
262 3iv7_A Alcohol dehydrogenase I 20.0 48 0.0016 36.6 2.7 33 754-787 87-120 (364)
No 1
>3pfn_A NAD kinase; structural genomics consortium, SNP, SGC, transferase; 2.70A {Homo sapiens}
Probab=100.00 E-value=5.4e-60 Score=522.50 Aligned_cols=254 Identities=48% Similarity=0.860 Sum_probs=218.1
Q ss_pred CccccCCchhhHhcccccCCCEEEEEecCCh-hHHHHHHHHHHHHhcCCCeEEEEcCChhhhhh--cCCCCccce---ee
Q 002281 671 SLAFTHPSTQQQMLMWKTTPRTVLVLKKPGP-ALMEEAKEVASFLYHQEKMNILVEPDVHDIFA--RIPGFGFVQ---TF 744 (943)
Q Consensus 671 ~~~~~~ps~~~~~l~w~~~pk~VlIv~K~~~-~~~~~a~~l~~~L~~~~g~~V~ve~~~~~~~~--~~~~~~~~~---~~ 744 (943)
-+++..|++ |+|+|.++||+|+||+|+++ ++.+.++++++||.+ .|++|+||+++++.+. ....++... ..
T Consensus 21 ~~~~~~~~~--~~l~w~~~~k~I~iv~K~~~~~~~~~~~~l~~~L~~-~~~~V~ve~~~~~~~~~~~~~~~~~~~~~~~~ 97 (365)
T 3pfn_A 21 IMHIQDPAS--QRLTWNKSPKSVLVIKKMRDASLLQPFKELCTHLME-ENMIVYVEKKVLEDPAIASDESFGAVKKKFCT 97 (365)
T ss_dssp EEEEECTTT--CBEEESSCCCEEEEEECTTCGGGHHHHHHHHHHHHH-TSCEEEEEHHHHHSHHHHHCSTTHHHHHHCEE
T ss_pred ceeecCccc--cccccCCCCCEEEEEecCCCHHHHHHHHHHHHHHHH-CCCEEEEehHHhhhhccccccccccccccccc
Confidence 455677766 56999999999999999996 478889999999986 5899999999876431 112221100 01
Q ss_pred eccCccccccCccEEEEEcCCchHHHHhhhccCCCCcEEEEeCCCCcccCCCCchhHHHHHHHHHcCCCCCCceeeeeee
Q 002281 745 YLQDTSDLHERVDFVACLGGDGVILHASNLFRGAVPPVISFNLGSLGFLTSHPFEDYRQDLRQVIYGNNTLDGVYITLRM 824 (943)
Q Consensus 745 ~~~~~~~l~~~~DlVIvLGGDGTiL~Aar~~~~~~~PVLGIN~GsLGFLt~~~~ed~~~~L~~ll~G~~~v~~~~i~~R~ 824 (943)
+..+.+++.+++|+||+||||||||+|++++.+..+||+|||+|+||||+++++++++++|+++++|+|. +++|+
T Consensus 98 ~~~~~~~~~~~~DlvI~lGGDGT~L~aa~~~~~~~~PvlGiN~G~LGFLt~~~~~~~~~~l~~vl~g~~~-----v~~R~ 172 (365)
T 3pfn_A 98 FREDYDDISNQIDFIICLGGDGTLLYASSLFQGSVPPVMAFHLGSLGFLTPFSFENFQSQVTQVIEGNAA-----VVLRS 172 (365)
T ss_dssp ECTTTCCCTTTCSEEEEESSTTHHHHHHHHCSSSCCCEEEEESSSCTTTCCEESTTHHHHHHHHHHSCCB-----EEEEC
T ss_pred cccChhhcccCCCEEEEEcChHHHHHHHHHhccCCCCEEEEcCCCCccceeecHHHHHHHHHHHHcCCCe-----EEEEe
Confidence 1234456778999999999999999999999999999999999999999999999999999999999965 68999
Q ss_pred EEEEEEEeC--------------------------CeecCCccccceeeEEEecCCCCeeEEEEEEECCEEeEEEeeCeE
Q 002281 825 RLCCEIFRN--------------------------GKAMPGKVFDVLNEVVVDRGSNPYLSKIECYEHDRLITKVQGDGV 878 (943)
Q Consensus 825 rL~~~V~r~--------------------------G~~~~~~~~~ALNEVvI~Rg~~~~l~~i~v~idg~~v~~~rgDGl 878 (943)
||+|++.+. |+.+ ..++|||||+|.|+..++|+++++|+||+++++|+||||
T Consensus 173 ~L~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~ALNEvvI~r~~~~~m~~~~v~idg~~~~~~~aDGl 250 (365)
T 3pfn_A 173 RLKVRVVKELRGKKTAVHNGLGEKGSQAAGLDMDVGKQA--MQYQVLNEVVIDRGPSSYLSNVDVYLDGHLITTVQGDGV 250 (365)
T ss_dssp CEEEEEEC-----------------------------CE--EEEEESSEEEEECTTCSSCCCEEEEETTEEEEEECSSEE
T ss_pred eEEEEEEeccccccccccccccccccccccccccCCcee--eccCccceEEEecCCCCcEEEEEEEECCEEEEEEecCeE
Confidence 999999752 2211 246899999999999999999999999999999999999
Q ss_pred EeCCCcchHHHhhhcCCCCCCCCCCeEEEEEccCCCCCCCCEEecCCCeEEEEEec
Q 002281 879 IVATPTGSTAYSTAAGGSMVHPNVPCMLFTPICPHSLSFRPVILPDSARLELKVKL 934 (943)
Q Consensus 879 IVSTPTGSTAYslSAGGPIV~P~v~~ivlTPIcPhsLs~RPlVLp~~s~I~Iki~~ 934 (943)
||||||||||||+|||||||||++++|+|||||||+|++||+|||++++|+|++..
T Consensus 251 IVSTPTGSTAYslSAGGPIv~P~~~~i~ltPI~PhsLs~RPiVlp~~~~I~i~v~~ 306 (365)
T 3pfn_A 251 IVSTPTGSTAYAAAAGASMIHPNVPAIMITPICPHSLSFRPIVVPAGVELKIMLSP 306 (365)
T ss_dssp EEECGGGGGTHHHHTTCCEECTTSCCEEEEEESCSSTTCCCEEECTTCCEEEEECT
T ss_pred EEeCCccHHHHHHhCCCCccCCCCCeEEEEeccCCccCCCceEECCCCEEEEEEcc
Confidence 99999999999999999999999999999999999999999999999999999864
No 2
>3afo_A NADH kinase POS5; alpha/beta+BETA sandwich, ATP-binding, mitochondrion NADP, nucleotide-binding, transferase, transit peptide; HET: NAI; 2.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5e-56 Score=494.80 Aligned_cols=269 Identities=34% Similarity=0.620 Sum_probs=224.4
Q ss_pred cceeeeeecCCCccccCCchhhHhcccccCCCEEEEEecCCh-hHHHHHHHHHHHHhcC-CCeEEEEcCChhhhhhc-CC
Q 002281 660 FSCNREKVTESSLAFTHPSTQQQMLMWKTTPRTVLVLKKPGP-ALMEEAKEVASFLYHQ-EKMNILVEPDVHDIFAR-IP 736 (943)
Q Consensus 660 ~~c~r~~~~~s~~~~~~ps~~~~~l~w~~~pk~VlIv~K~~~-~~~~~a~~l~~~L~~~-~g~~V~ve~~~~~~~~~-~~ 736 (943)
.+|+.+..+.....+.+|+.+++.|.|.+++++|+||.|+++ ++.+.+.++++||.++ .+++|+++++.++.+.. .+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~k~V~II~n~~~~~~~~~~~~l~~~L~~~~~gi~V~ve~~~a~~l~~~~~ 90 (388)
T 3afo_A 11 KPVNNLRSSSSADFVSPPNSKLQSLIWQNPLQNVYITKKPWTPSTREAMVEFITHLHESYPEVNVIVQPDVAEEISQDFK 90 (388)
T ss_dssp EEGGGSCCCCCCEEEC----CCEEEECSSCCCEEEEEECTTCHHHHHHHHHHHHHHHHHCTTCEEECCHHHHHHHHTTCC
T ss_pred eeHhhcCcccCcceEeCcchhheeeEccCCCcEEEEEEeCCCHHHHHHHHHHHHHHHHhCCCeEEEEeCchhhhhhhhcc
Confidence 388888887556677999999999999999999999999886 4678889999999753 48999999887765431 10
Q ss_pred CCc-----cceeeeccCccccccCccEEEEEcCCchHHHHhhhccCCCC-cEEEEeCCCCcccCCCCchhHHHHHHHHHc
Q 002281 737 GFG-----FVQTFYLQDTSDLHERVDFVACLGGDGVILHASNLFRGAVP-PVISFNLGSLGFLTSHPFEDYRQDLRQVIY 810 (943)
Q Consensus 737 ~~~-----~~~~~~~~~~~~l~~~~DlVIvLGGDGTiL~Aar~~~~~~~-PVLGIN~GsLGFLt~~~~ed~~~~L~~ll~ 810 (943)
... ....++..+..++.+++|+||+||||||||+|++.+....+ ||+|||+|++|||+++++++++++|+++++
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~DlVIvlGGDGTlL~aa~~~~~~~vpPiLGIN~G~lGFLt~~~~~~~~~al~~il~ 170 (388)
T 3afo_A 91 SPLENDPNRPHILYTGPEQDIVNRTDLLVTLGGDGTILHGVSMFGNTQVPPVLAFALGTLGFLSPFDFKEHKKVFQEVIS 170 (388)
T ss_dssp SCGGGCTTSCEEEEECCHHHHHHHCSEEEEEESHHHHHHHHHTTTTSCCCCEEEEECSSCCSSCCEEGGGHHHHHHHHHT
T ss_pred ccccccccccccccccchhhcccCCCEEEEEeCcHHHHHHHHHhcccCCCeEEEEECCCcccCCcCChHHHHHHHHHHhc
Confidence 000 00111112223345678999999999999999999987665 899999999999999999999999999999
Q ss_pred CCCCCCceeeeeeeEEEEEEEeCCeecCCccccceeeEEEecCCCCeeEEEEEEECCEEeEEEeeCeEEeCCCcchHHHh
Q 002281 811 GNNTLDGVYITLRMRLCCEIFRNGKAMPGKVFDVLNEVVVDRGSNPYLSKIECYEHDRLITKVQGDGVIVATPTGSTAYS 890 (943)
Q Consensus 811 G~~~v~~~~i~~R~rL~~~V~r~G~~~~~~~~~ALNEVvI~Rg~~~~l~~i~v~idg~~v~~~rgDGlIVSTPTGSTAYs 890 (943)
|+| .++.|+||++++.++|+.. ....+|||||+|.|+..++++++++++||+++++++||||||||||||||||
T Consensus 171 g~~-----~~~~r~~L~~~v~~~~~~~-~~~~~ALNev~i~~~~~~~~~~~~v~id~~~~~~~~~DGliVsTPTGSTAYs 244 (388)
T 3afo_A 171 SRA-----KCLHRTRLECHLKKKDSNS-SIVTHAMNDIFLHRGNSPHLTNLDIFIDGEFLTRTTADGVALATPTGSTAYS 244 (388)
T ss_dssp TCC-----EEEEECCEEEEEECTTCCC-CEEEEESSEEEEECTTCSSCEEEEEEETTEEEEEEEEEEEEEECTGGGGTHH
T ss_pred CCc-----eEEEeeEEEEEEEeCCccc-hhhheeeceEEEecCCCCcEEEEEEEECCEEEEeecCCeEEEeCCCcHHHHH
Confidence 985 4689999999998776532 1236899999999999999999999999999999999999999999999999
Q ss_pred hhcCCCCCCCCCCeEEEEEccCCCCCCCCEEecCCCeEEEEEec
Q 002281 891 TAAGGSMVHPNVPCMLFTPICPHSLSFRPVILPDSARLELKVKL 934 (943)
Q Consensus 891 lSAGGPIV~P~v~~ivlTPIcPhsLs~RPlVLp~~s~I~Iki~~ 934 (943)
+|||||||||.+++|+|||||||+|++||||||+++.|+|++..
T Consensus 245 lSAGGpIv~P~~~~~~ltPI~Ph~l~~RpiVl~~~~~i~i~v~~ 288 (388)
T 3afo_A 245 LSAGGSIVSPLVPAILMTPICPRSLSFRPLILPHSSHIRIKIGS 288 (388)
T ss_dssp HHTTCCEECTTSCEEEEEEEEESCSCCCCEEEETTCCEEEEECC
T ss_pred HhccCCcccCCCCceEEeeecCCcccCCCeEECCCCEEEEEEcc
Confidence 99999999999999999999999999999999999999999853
No 3
>1z0s_A Probable inorganic polyphosphate/ATP-NAD kinase; ATP-binding, structural genomics, NADP, PSI, protein structure initiative; HET: ATP; 1.70A {Archaeoglobus fulgidus} SCOP: e.52.1.1 PDB: 1z0u_A* 1z0z_A* 1suw_A*
Probab=100.00 E-value=2.2e-49 Score=424.35 Aligned_cols=208 Identities=24% Similarity=0.432 Sum_probs=180.1
Q ss_pred hcccccC---CCEEEEEecCChhHHHHHHHHHHHHhcCCCeEEEEcCChhhhhhcCCCCccceeeeccCccccccCccEE
Q 002281 683 MLMWKTT---PRTVLVLKKPGPALMEEAKEVASFLYHQEKMNILVEPDVHDIFARIPGFGFVQTFYLQDTSDLHERVDFV 759 (943)
Q Consensus 683 ~l~w~~~---pk~VlIv~K~~~~~~~~a~~l~~~L~~~~g~~V~ve~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~DlV 759 (943)
++.|.-. .-+|+||.|+..+ +.++.+||.+ .|++|++++..++ ..+++|+|
T Consensus 19 ~~~~~~~~~~~mki~iv~~~~~~----~~~l~~~L~~-~g~~v~~~~~~~~---------------------~~~~~Dlv 72 (278)
T 1z0s_A 19 NLYFQGGGGGGMRAAVVYKTDGH----VKRIEEALKR-LEVEVELFNQPSE---------------------ELENFDFI 72 (278)
T ss_dssp -----------CEEEEEESSSTT----HHHHHHHHHH-TTCEEEEESSCCG---------------------GGGGSSEE
T ss_pred eEEEcCCCccceEEEEEeCCcHH----HHHHHHHHHH-CCCEEEEcccccc---------------------ccCCCCEE
Confidence 4667431 1259999998876 7889999975 5899988665321 12368999
Q ss_pred EEEcCCchHHHHhhhccCCCCcEEEEeCCCCcccCCCCchhHHHHHHHHHcCCCCCCceeeeeeeEEEEEEEeCCeecCC
Q 002281 760 ACLGGDGVILHASNLFRGAVPPVISFNLGSLGFLTSHPFEDYRQDLRQVIYGNNTLDGVYITLRMRLCCEIFRNGKAMPG 839 (943)
Q Consensus 760 IvLGGDGTiL~Aar~~~~~~~PVLGIN~GsLGFLt~~~~ed~~~~L~~ll~G~~~v~~~~i~~R~rL~~~V~r~G~~~~~ 839 (943)
|+||||||+|+|+|.+... +||+|||+|++|||+++++++++++|+++++ +| .++.|+||++ +.+++
T Consensus 73 IvlGGDGT~L~aa~~~~~~-~PilGIN~G~lGFLt~~~~~~~~~~l~~l~~-~~-----~i~~r~~L~~-v~~~~----- 139 (278)
T 1z0s_A 73 VSVGGDGTILRILQKLKRC-PPIFGINTGRVGLLTHASPENFEVELKKAVE-KF-----EVERFPRVSC-SAMPD----- 139 (278)
T ss_dssp EEEECHHHHHHHHTTCSSC-CCEEEEECSSSCTTCCBBTTBCHHHHHHHHH-HC-----CEEEECCEEE-TTEEE-----
T ss_pred EEECCCHHHHHHHHHhCCC-CcEEEECCCCCccccccCHHHHHHHHHHHHh-hC-----eEEEeEEEEE-EECCC-----
Confidence 9999999999999999887 9999999999999999999999999999998 65 4689999998 63321
Q ss_pred ccccceeeEEEecCCCCeeEEEEEEECCEEeEEEeeCeEEeCCCcchHHHhhhcCCCCCCCCCCeEEEEEccCCCCCCCC
Q 002281 840 KVFDVLNEVVVDRGSNPYLSKIECYEHDRLITKVQGDGVIVATPTGSTAYSTAAGGSMVHPNVPCMLFTPICPHSLSFRP 919 (943)
Q Consensus 840 ~~~~ALNEVvI~Rg~~~~l~~i~v~idg~~v~~~rgDGlIVSTPTGSTAYslSAGGPIV~P~v~~ivlTPIcPhsLs~RP 919 (943)
.+|||||+|.++..++++++++++||+++++++||||||||||||||||+|||||||+|++++|++||||||++++||
T Consensus 140 --~~ALNEv~I~~~~~~~~~~~~v~idg~~~~~~~~DGlIVsTPTGSTAY~lSAGGpIv~P~~~~l~ltPI~P~~l~~Rp 217 (278)
T 1z0s_A 140 --VLALNEIAVLSRKPAKMIDVALRVDGVEVDRIRCDGFIVATQIGSTGYAFSAGGPVVEPYLECFILIPIAPFRFGWKP 217 (278)
T ss_dssp --EEESSEEEEEESSTTCCEEEEEEETTEEEEEEEESEEEEEESGGGGTHHHHTTCCEECTTSCCEEEEEESCCSSBCCC
T ss_pred --cEEEEEEEEecCCCccEEEEEEEECCEEEEEEecCeEEEecCCchhHHHhhCCCceeCCCCCeEEEEEeCCCCCCCCc
Confidence 579999999999989999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCeEEEE
Q 002281 920 VILPDSARLELK 931 (943)
Q Consensus 920 lVLp~~s~I~Ik 931 (943)
+|||++++|+|+
T Consensus 218 iVl~~~~~i~i~ 229 (278)
T 1z0s_A 218 YVVSMERKIEVI 229 (278)
T ss_dssp EEECTTSCEEEE
T ss_pred EEECCCCEEEEE
Confidence 999999999997
No 4
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=100.00 E-value=1.5e-45 Score=397.77 Aligned_cols=235 Identities=28% Similarity=0.433 Sum_probs=189.8
Q ss_pred CCCEEEEEecCChh-HHHHHHHHHHHHhcCCCeEEEEcCChhhhhh--cC-C----CCc-cceeeeccCccccccCccEE
Q 002281 689 TPRTVLVLKKPGPA-LMEEAKEVASFLYHQEKMNILVEPDVHDIFA--RI-P----GFG-FVQTFYLQDTSDLHERVDFV 759 (943)
Q Consensus 689 ~pk~VlIv~K~~~~-~~~~a~~l~~~L~~~~g~~V~ve~~~~~~~~--~~-~----~~~-~~~~~~~~~~~~l~~~~DlV 759 (943)
++++|+||.|+... ..+.+.++++||.+ .|++|.+++...+.+. .. + ..+ ....+ .. .....+++|+|
T Consensus 3 ~m~ki~iI~n~~~~~~~~~~~~l~~~L~~-~g~~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~-~~~~~~~~d~v 79 (307)
T 1u0t_A 3 AHRSVLLVVHTGRDEATETARRVEKVLGD-NKIALRVLSAEAVDRGSLHLAPDDMRAMGVEIEVV-DA-DQHAADGCELV 79 (307)
T ss_dssp --CEEEEEESSSGGGGSHHHHHHHHHHHT-TTCEEEEEC-------------------------------------CCCE
T ss_pred CCCEEEEEEeCCCHHHHHHHHHHHHHHHH-CCCEEEEecchhhhhhccccccccccccccccccc-cc-ccccccCCCEE
Confidence 46899999998864 56778999999975 6899988776543220 00 0 000 00100 00 01245678999
Q ss_pred EEEcCCchHHHHhhhccCCCCcEEEEeCCCCcccCCCCchhHHHHHHHHHcCCCCCCceeeeeeeEEEEEEEeCCeecCC
Q 002281 760 ACLGGDGVILHASNLFRGAVPPVISFNLGSLGFLTSHPFEDYRQDLRQVIYGNNTLDGVYITLRMRLCCEIFRNGKAMPG 839 (943)
Q Consensus 760 IvLGGDGTiL~Aar~~~~~~~PVLGIN~GsLGFLt~~~~ed~~~~L~~ll~G~~~v~~~~i~~R~rL~~~V~r~G~~~~~ 839 (943)
|++|||||||++++.+...++|++|||+|++|||+++.+++++++++++++|++. ++.|++|++++.++|+..
T Consensus 80 i~~GGDGT~l~a~~~~~~~~~pvlgi~~G~~gfl~~~~~~~~~~~~~~i~~g~~~-----~~~r~~l~~~v~~~g~~~-- 152 (307)
T 1u0t_A 80 LVLGGDGTFLRAAELARNASIPVLGVNLGRIGFLAEAEAEAIDAVLEHVVAQDYR-----VEDRLTLDVVVRQGGRIV-- 152 (307)
T ss_dssp EEEECHHHHHHHHHHHHHHTCCEEEEECSSCCSSCSEEGGGHHHHHHHHHHTCCE-----EEEECCEEEEEEETTEEE--
T ss_pred EEEeCCHHHHHHHHHhccCCCCEEEEeCCCCccCcccCHHHHHHHHHHHHcCCcE-----EEEEEEEEEEEEeCccce--
Confidence 9999999999999998877899999999999999999999999999999999854 588999999998887653
Q ss_pred ccccceeeEEEecCCCCeeEEEEEEECCEEeEEEeeCeEEeCCCcchHHHhhhcCCCCCCCCCCeEEEEEccCCCCCCCC
Q 002281 840 KVFDVLNEVVVDRGSNPYLSKIECYEHDRLITKVQGDGVIVATPTGSTAYSTAAGGSMVHPNVPCMLFTPICPHSLSFRP 919 (943)
Q Consensus 840 ~~~~ALNEVvI~Rg~~~~l~~i~v~idg~~v~~~rgDGlIVSTPTGSTAYslSAGGPIV~P~v~~ivlTPIcPhsLs~RP 919 (943)
...+||||++|.++..++++++++++||++++++++|||||||||||||||+|||||||+|+++++++||||||+++.||
T Consensus 153 ~~~~ALNev~i~~~~~~~~~~~~v~idg~~~~~~~~dGlivsTptGSTaY~lSaGGpiv~P~~~~~~l~pi~p~~l~~rp 232 (307)
T 1u0t_A 153 NRGWALNEVSLEKGPRLGVLGVVVEIDGRPVSAFGCDGVLVSTPTGSTAYAFSAGGPVLWPDLEAILVVPNNAHALFGRP 232 (307)
T ss_dssp EEEEESSEEEEECSSSSSCEEEEEESSSSEEEEEEESEEEEECTGGGGTHHHHTTCCEECTTCCCEEEEEESCSSSCCCC
T ss_pred eceeeeeeEEEecCCCceEEEEEEEECCEEEEEEcCCEEEEccchhhHHHHhcCCCCccCCCCCeEEEEeecCccccCCC
Confidence 23579999999999888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCeEEEEEe
Q 002281 920 VILPDSARLELKVK 933 (943)
Q Consensus 920 lVLp~~s~I~Iki~ 933 (943)
+|+|++++|+|++.
T Consensus 233 ~v~~~~~~i~i~v~ 246 (307)
T 1u0t_A 233 MVTSPEATIAIEIE 246 (307)
T ss_dssp EEECTTCCEEEEEC
T ss_pred EEECCCCEEEEEEe
Confidence 99999999999875
No 5
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=100.00 E-value=1.1e-43 Score=378.42 Aligned_cols=229 Identities=26% Similarity=0.467 Sum_probs=189.6
Q ss_pred CCEEEEEecCChh-HHHHHHHHHHHHhcCCCeEEEEcCChhhhhhcCCCCccceeeeccCccccccCccEEEEEcCCchH
Q 002281 690 PRTVLVLKKPGPA-LMEEAKEVASFLYHQEKMNILVEPDVHDIFARIPGFGFVQTFYLQDTSDLHERVDFVACLGGDGVI 768 (943)
Q Consensus 690 pk~VlIv~K~~~~-~~~~a~~l~~~L~~~~g~~V~ve~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~DlVIvLGGDGTi 768 (943)
.++|+||.++.++ ..+.+.++++||.+ .|++|.+++...+.+. .++. ..+ ..+...+++|+||++|||||+
T Consensus 5 mkki~ii~np~~~~~~~~~~~i~~~l~~-~g~~v~~~~~~~~~~~-~~~~---~~~---~~~~~~~~~D~vi~~GGDGT~ 76 (292)
T 2an1_A 5 FKCIGIVGHPRHPTALTTHEMLYRWLCD-QGYEVIVEQQIAHELQ-LKNV---PTG---TLAEIGQQADLAVVVGGDGNM 76 (292)
T ss_dssp CCEEEEECC-------CHHHHHHHHHHH-TTCEEEEEHHHHHHTT-CSSC---CEE---CHHHHHHHCSEEEECSCHHHH
T ss_pred CcEEEEEEcCCCHHHHHHHHHHHHHHHH-CCCEEEEecchhhhcc-cccc---ccc---chhhcccCCCEEEEEcCcHHH
Confidence 4789999998754 45678899999975 5899988776544321 1111 111 112334578999999999999
Q ss_pred HHHhhhccCCCCcEEEEeCCCCcccCCCCchhHHHHHHHHHcCCCCCCceeeeeeeEEEEEEEeCCeecCCccccceeeE
Q 002281 769 LHASNLFRGAVPPVISFNLGSLGFLTSHPFEDYRQDLRQVIYGNNTLDGVYITLRMRLCCEIFRNGKAMPGKVFDVLNEV 848 (943)
Q Consensus 769 L~Aar~~~~~~~PVLGIN~GsLGFLt~~~~ed~~~~L~~ll~G~~~v~~~~i~~R~rL~~~V~r~G~~~~~~~~~ALNEV 848 (943)
|++++.+...++|++|||+|++|||+++.+++++++++.+++|++ .+..|++|++.+.++|+.. ...+||||+
T Consensus 77 l~a~~~~~~~~~P~lGI~~Gt~gfla~~~~~~~~~al~~i~~g~~-----~~~~r~~l~~~~~~~~~~~--~~~~alnev 149 (292)
T 2an1_A 77 LGAARTLARYDINVIGINRGNLGFLTDLDPDNALQQLSDVLEGRY-----ISEKRFLLEAQVCQQDRQK--RISTAINEV 149 (292)
T ss_dssp HHHHHHHTTSSCEEEEBCSSSCCSSCCBCTTSHHHHHHHHHTTCE-----EEEEEEEEEEEEECC------CEEEESSEE
T ss_pred HHHHHHhhcCCCCEEEEECCCcccCCcCCHHHHHHHHHHHHcCCC-----EEEEeEEEEEEEEeCCceE--eeeeEeeeE
Confidence 999999987789999999999999999999999999999999984 4688999999987766543 246899999
Q ss_pred EEecCCCCeeEEEEEEECCEEeEEEeeCeEEeCCCcchHHHhhhcCCCCCCCCCCeEEEEEccCCCCCCCCEEecCCCeE
Q 002281 849 VVDRGSNPYLSKIECYEHDRLITKVQGDGVIVATPTGSTAYSTAAGGSMVHPNVPCMLFTPICPHSLSFRPVILPDSARL 928 (943)
Q Consensus 849 vI~Rg~~~~l~~i~v~idg~~v~~~rgDGlIVSTPTGSTAYslSAGGPIV~P~v~~ivlTPIcPhsLs~RPlVLp~~s~I 928 (943)
+|.++...+++++++++||++++++++||+||||||||||||+|||||+++|++++++++|||||+++.||+|+++++.|
T Consensus 150 ~i~~~~~~~~~~~~v~idg~~~~~~~~dglivstptGSTay~~SaGG~iv~P~~~~~~l~pi~p~~l~~r~iv~~~~~~i 229 (292)
T 2an1_A 150 VLHPGKVAHMIEFEVYIDETFAFSQRSDGLIISTPTGSTAYSLSAGGPILTPSLDAITLVPMFPHTLSARPLVINSSSTI 229 (292)
T ss_dssp EEEESSTTCCEEEEEEETTEEEEEEEESEEEEECTGGGGTHHHHTTCCEECTTCSEEEEEEESCSSTTCCCEEEETTCCE
T ss_pred EEecCCCCceEEEEEEECCEEEEEEEeCEEEECCCCchHHHHHhCCCCCCCCCCCeEEEEecCcCcCCCCCEEECCCCEE
Confidence 99998888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEe
Q 002281 929 ELKVK 933 (943)
Q Consensus 929 ~Iki~ 933 (943)
+|++.
T Consensus 230 ~i~~~ 234 (292)
T 2an1_A 230 RLRFS 234 (292)
T ss_dssp EEEEC
T ss_pred EEEEc
Confidence 99873
No 6
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=100.00 E-value=1.3e-42 Score=369.06 Aligned_cols=202 Identities=21% Similarity=0.326 Sum_probs=177.9
Q ss_pred EEEEEecCChhHHHHHHHHHHHHhcCCCeEEEEcCChhhhhhcCCCCccceeeeccCccccccCccEEEEEcCCchHHHH
Q 002281 692 TVLVLKKPGPALMEEAKEVASFLYHQEKMNILVEPDVHDIFARIPGFGFVQTFYLQDTSDLHERVDFVACLGGDGVILHA 771 (943)
Q Consensus 692 ~VlIv~K~~~~~~~~a~~l~~~L~~~~g~~V~ve~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~DlVIvLGGDGTiL~A 771 (943)
+++||.+++++..+.+.++.+||.+ .|+++ + .+++|+||++|||||+|++
T Consensus 2 ki~ii~n~~~~~~~~~~~l~~~l~~-~g~~v--~---------------------------~~~~D~vv~lGGDGT~l~a 51 (272)
T 2i2c_A 2 KYMITSKGDEKSDLLRLNMIAGFGE-YDMEY--D---------------------------DVEPEIVISIGGDGTFLSA 51 (272)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHTT-SSCEE--C---------------------------SSSCSEEEEEESHHHHHHH
T ss_pred EEEEEECCCHHHHHHHHHHHHHHHH-CCCEe--C---------------------------CCCCCEEEEEcCcHHHHHH
Confidence 5888888777777888999999964 46655 0 1357999999999999999
Q ss_pred hhhccCC--CCcEEEEeCCCCcccCCCCchhHHHHHHHHHcCCCCCCceeeeeeeEEEEEEEeC-CeecCCccccceeeE
Q 002281 772 SNLFRGA--VPPVISFNLGSLGFLTSHPFEDYRQDLRQVIYGNNTLDGVYITLRMRLCCEIFRN-GKAMPGKVFDVLNEV 848 (943)
Q Consensus 772 ar~~~~~--~~PVLGIN~GsLGFLt~~~~ed~~~~L~~ll~G~~~v~~~~i~~R~rL~~~V~r~-G~~~~~~~~~ALNEV 848 (943)
++.+.+. ++||+|||+|++|||+++.+++++++++++++|++. ++.|++|++++.++ |+.. ....||||+
T Consensus 52 a~~~~~~~~~~PilGIn~G~lgfl~~~~~~~~~~~l~~l~~g~~~-----i~~r~~L~~~v~~~~g~~~--~~~~ALNev 124 (272)
T 2i2c_A 52 FHQYEERLDEIAFIGIHTGHLGFYADWRPAEADKLVKLLAKGEYQ-----KVSYPLLKTTVKYGIGKKE--ATYLALNES 124 (272)
T ss_dssp HHHTGGGTTTCEEEEEESSSCCSSCCBCGGGHHHHHHHHHTTCCE-----EEEEEEEEEEEEESSSCCE--EEEEESSEE
T ss_pred HHHHhhcCCCCCEEEEeCCCCCcCCcCCHHHHHHHHHHHHcCCCE-----EEEEEEEEEEEEeCCCcEE--eHHhhhhHh
Confidence 9999765 899999999999999999999999999999999854 68899999998764 4321 135799999
Q ss_pred EEecCCCCeeEEEEEEECCEEeEEEeeCeEEeCCCcchHHHhhhcCCCCCCCCCCeEEEEEccCCCCC-CC----CEEec
Q 002281 849 VVDRGSNPYLSKIECYEHDRLITKVQGDGVIVATPTGSTAYSTAAGGSMVHPNVPCMLFTPICPHSLS-FR----PVILP 923 (943)
Q Consensus 849 vI~Rg~~~~l~~i~v~idg~~v~~~rgDGlIVSTPTGSTAYslSAGGPIV~P~v~~ivlTPIcPhsLs-~R----PlVLp 923 (943)
+|.+. ++++++++++||++++++++||+|||||||||||++|||||||+|+++++++||||||++. +| |+|+|
T Consensus 125 ~i~~~--~~~~~~~i~idg~~~~~~~~DGlivsTptGSTaY~~SaGGpiv~P~~~~~~ltpi~p~~l~~~r~~~~p~v~~ 202 (272)
T 2i2c_A 125 TVKSS--GGPFVVDVVINDIHFERFRGDGLCMSTPSGTTAYNKSLGGALMHPSIEAMQLTEMASINNRVYRTIGSPLVFP 202 (272)
T ss_dssp EEEES--SSCEEEEEEETTEEEEEEEESEEEEECTGGGGTHHHHTTCCCCCTTSCEEEEEEESCCCSSSCCCCCSCEEEE
T ss_pred hhccc--CcEEEEEEEECCEEEEEEECCEEEEEccccHHHHHHcCCCCeeCCCCCceEEeCCCCccchhhhccCCcEEeC
Confidence 99884 4899999999999999999999999999999999999999999999999999999999998 55 99999
Q ss_pred CCCeEEEEE
Q 002281 924 DSARLELKV 932 (943)
Q Consensus 924 ~~s~I~Iki 932 (943)
++++|+|++
T Consensus 203 ~~~~i~i~~ 211 (272)
T 2i2c_A 203 KHHVVSLQP 211 (272)
T ss_dssp TTCCEEEEE
T ss_pred CCCEEEEEE
Confidence 999999986
No 7
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}
Probab=100.00 E-value=3.3e-42 Score=363.54 Aligned_cols=168 Identities=28% Similarity=0.440 Sum_probs=156.9
Q ss_pred ccCccEEEEEcCCchHHHHhhhccCCCCcEEEEeCCCCcccCCCCchhHHHHHHHHHcCCCCCCceeeeeeeEEEEEEEe
Q 002281 753 HERVDFVACLGGDGVILHASNLFRGAVPPVISFNLGSLGFLTSHPFEDYRQDLRQVIYGNNTLDGVYITLRMRLCCEIFR 832 (943)
Q Consensus 753 ~~~~DlVIvLGGDGTiL~Aar~~~~~~~PVLGIN~GsLGFLt~~~~ed~~~~L~~ll~G~~~v~~~~i~~R~rL~~~V~r 832 (943)
.+++|+||++|||||||++++.+.. .+|++|||+|++|||+++.+++++++++++++|++ .++.|++|++.+.+
T Consensus 39 ~~~~D~vv~~GGDGTll~~a~~~~~-~~PilGIn~G~~Gfl~~~~~~~~~~al~~i~~g~~-----~i~~r~~l~~~~~~ 112 (258)
T 1yt5_A 39 RVTADLIVVVGGDGTVLKAAKKAAD-GTPMVGFKAGRLGFLTSYTLDEIDRFLEDLRNWNF-----REETRWFIQIESEL 112 (258)
T ss_dssp CBCCSEEEEEECHHHHHHHHTTBCT-TCEEEEEESSSCCSSCCBCGGGHHHHHHHHHTTCC-----EEEEEEEEEEEETT
T ss_pred cCCCCEEEEEeCcHHHHHHHHHhCC-CCCEEEEECCCCCccCcCCHHHHHHHHHHHHcCCc-----eEEEEEEEEEEEcC
Confidence 4578999999999999999999988 99999999999999999999999999999999985 36889999998732
Q ss_pred CCeecCCccccceeeEEEecCCCCeeEEEEEEECCEEeEEEeeCeEEeCCCcchHHHhhhcCCCCCCCCCCeEEEEEccC
Q 002281 833 NGKAMPGKVFDVLNEVVVDRGSNPYLSKIECYEHDRLITKVQGDGVIVATPTGSTAYSTAAGGSMVHPNVPCMLFTPICP 912 (943)
Q Consensus 833 ~G~~~~~~~~~ALNEVvI~Rg~~~~l~~i~v~idg~~v~~~rgDGlIVSTPTGSTAYslSAGGPIV~P~v~~ivlTPIcP 912 (943)
+ ..+||||++|.++...+++++++++||++++++++||+||||||||||||+||||||++|++++|++|||||
T Consensus 113 ~-------~~~alNev~i~~~~~~~~~~~~v~idg~~~~~~~~dGlivsTptGSTaY~~SaGGpiv~P~~~~~~i~pi~p 185 (258)
T 1yt5_A 113 G-------NHLALNDVTLERDLSGKMVEIEVEVEHHSSMWFFADGVVISTPTGSTAYSLSIGGPIIFPECEVLEISPIAP 185 (258)
T ss_dssp E-------EEEESSEEEEECCTTSCCEEEEEEETTSCCEEEEESEEEEECTGGGGTTTTTTTCCCCCTTCCEEEEEEESC
T ss_pred C-------cceeeeEEEEecCCCCceEEEEEEECCEEEEEEEccEEEEEcCCCcHHHHhhCCCcccCCCCCEEEEEEecc
Confidence 1 357999999999878899999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCEEecCCCeEEEEEe
Q 002281 913 HSLSFRPVILPDSARLELKVK 933 (943)
Q Consensus 913 hsLs~RPlVLp~~s~I~Iki~ 933 (943)
|+++.||+|+|++++|+|++.
T Consensus 186 ~~l~~rp~v~~~~~~i~i~~~ 206 (258)
T 1yt5_A 186 QFFLTRSVVIPSNFKVVVESQ 206 (258)
T ss_dssp STTCCCCEEEETTSCEEEEEE
T ss_pred ccccCCCEEECCCCEEEEEEC
Confidence 999999999999999999874
No 8
>1ywf_A Phosphotyrosine protein phosphatase PTPB; four stranded parallel beta sheet with flanking helices, structural genomics, PSI; 1.71A {Mycobacterium tuberculosis} SCOP: c.45.1.5 PDB: 2oz5_A*
Probab=99.92 E-value=5.4e-25 Score=237.31 Aligned_cols=171 Identities=15% Similarity=0.159 Sum_probs=130.1
Q ss_pred CcCCCCceeeeccCCccccccCCCcceEEEcCCC---CHhhHHHHHHcCCcEEEEcCCCcccCcchhhhhHHhhhcCCcE
Q 002281 242 HTLFANWSPVYLSNSKDDIASKDSEVTFCRGGQV---TEEGLKWLMEKGYKTIVDIRAERVKDNFYEAAIDDAILSGKVE 318 (943)
Q Consensus 242 ~t~iaNwr~V~l~~~~d~~~~~~~e~~LYRSGqp---T~eDLa~Lk~lGIKTVIDLRse~~ee~~~~a~e~e~~e~~GI~ 318 (943)
...+.|||++++..+. ...+.||||+++ +++|+++|+++||+||||||++. |.... .......|++
T Consensus 26 l~g~~NfRDlGGy~t~------vr~G~lyRS~~l~~lt~~d~~~L~~lGI~tVIDLR~~~-E~~~~----~pd~~~~Gi~ 94 (296)
T 1ywf_A 26 LPGAWNFRDVADTATA------LRPGRLFRSSELSRLDDAGRATLRRLGITDVADLRSSR-EVARR----GPGRVPDGID 94 (296)
T ss_dssp CTTCCSCEEGGGTCTT------SCTTSEEEESCCTTCCHHHHHHHHHHTCCEEEECCCHH-HHHHH----CSCCCCTTCE
T ss_pred CCCCCccccCCCcccc------ccCcceeccCCcccCCHHHHHHHHhCCCCEEEECcChh-hhhcc----CCCCCCCCCE
Confidence 4457789998765542 445689999975 69999999999999999999875 21111 0123467999
Q ss_pred EEEEecCCCCC-------C-------------------C--------------------------HHHHHHHHHHHhcCC
Q 002281 319 LIKIPVEVRTA-------P-------------------T--------------------------MEQVEKFASLVSNSS 346 (943)
Q Consensus 319 yIhIPV~d~~~-------P-------------------s--------------------------~E~v~aFlelL~ds~ 346 (943)
|+|+|+.+... | . ...+.++++.+. .
T Consensus 95 ~~~iPi~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~m~~~Y~~~~~~~~~~~~~~~~l~~l~-~- 172 (296)
T 1ywf_A 95 VHLLPFPDLADDDADDSAPHETAFKRLLTNDGSNGESGESSQSINDAATRYMTDEYRQFPTRNGAQRALHRVVTLLA-A- 172 (296)
T ss_dssp EEECCCCCSCC-------------------------------CCCHHHHHHHHHHHHHGGGSTTHHHHHHHHHHHHH-T-
T ss_pred EEEecCccccccccccccchhhHHHHHhhhcccccccchhhhcccchHHHHHHHHHHHHHhcchhHHHHHHHHHHhc-c-
Confidence 99999986432 1 0 012334444443 2
Q ss_pred CCcEEEeCccCCchHHHHHHHHHHhcCCCHHHHHHHhhccccccccchH-------------------------------
Q 002281 347 KKPLYLHSKEGVWRTYAMVSRWRQYMARCASQISGQTITSNDVLLKDST------------------------------- 395 (943)
Q Consensus 347 ~~PVLVHC~AGKDRTGALvaLlr~~lGvs~edAiaDYLlsn~~~~~~~e------------------------------- 395 (943)
++|+||||++||||||+++++++.++||+.++|++||++||.++....+
T Consensus 173 ~~pvl~HC~aGkDRTG~~~alll~~~g~~~~~I~~DY~~Tn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (296)
T 1ywf_A 173 GRPVLTHCFAGKDRTGFVVALVLEAVGLDRDVIVADYLRSNDSVPQLRARISEMIQQRFDTELAPEVVTFTKARLSDGVL 252 (296)
T ss_dssp TCCEEEECSSSSSHHHHHHHHHHHHTTCCHHHHHHHHHGGGGGHHHHHHHHHHHHHTTTTSCCCHHHHHHHHTTTCHHHH
T ss_pred CCCEEEECCCCCccccHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccchhHHHhhhhhhhhhhh
Confidence 8899999999999999999999999999999999999999988653211
Q ss_pred HHhhhhhchhhhhhhhhccchhhhHhhhhcc
Q 002281 396 RTRKLKASAGKFLLEEKYETVKENQDEIQTK 426 (943)
Q Consensus 396 ~~r~~~m~a~~~~l~~~~g~~e~~~~~~~~~ 426 (943)
+++++.|.+++..|+++|||+++|+++. +.
T Consensus 253 ~~~~~~l~~~l~~i~~~yGs~~~YL~~~-Gl 282 (296)
T 1ywf_A 253 GVRAEYLAAARQTIDETYGSLGGYLRDA-GI 282 (296)
T ss_dssp SCCHHHHHHHHHHHHHHHSSHHHHHHHT-TC
T ss_pred ccCHHHHHHHHHHHHHHcCCHHHHHHHc-CC
Confidence 1256789999999999999999999887 44
No 9
>1xri_A AT1G05000; structural genomics, protein structure initiative, CESG for eukaryotic structural genomics, phosphoprote phosphatase; 3.30A {Arabidopsis thaliana} SCOP: c.45.1.1 PDB: 2q47_A
Probab=99.83 E-value=2.4e-20 Score=179.23 Aligned_cols=117 Identities=16% Similarity=0.239 Sum_probs=98.6
Q ss_pred eEEEcCCCCHhhHHHHHHcCCcEEEEcCCCcccCcchhhhhHHhhhcCCcEEEEEecCCCC----CCCHHHHHHHHHHHh
Q 002281 268 TFCRGGQVTEEGLKWLMEKGYKTIVDIRAERVKDNFYEAAIDDAILSGKVELIKIPVEVRT----APTMEQVEKFASLVS 343 (943)
Q Consensus 268 ~LYRSGqpT~eDLa~Lk~lGIKTVIDLRse~~ee~~~~a~e~e~~e~~GI~yIhIPV~d~~----~Ps~E~v~aFlelL~ 343 (943)
.||||+++++++++.|+++||++|||||++. +.. ...+.++..|++|+|+|+.+.. .++.+.+.++++.+.
T Consensus 14 ~l~~s~~~~~~d~~~L~~~gi~~Vi~l~~~~-e~~----~~~~~~~~~gi~~~~ipi~d~~~~~~~~~~~~~~~~~~~i~ 88 (151)
T 1xri_A 14 GIFRSGFPDSANFSFLQTLGLRSIIYLCPEP-YPE----SNLQFLKSNGIRLFQFGIEGNKEPFVNIPDHKIRMALKVLL 88 (151)
T ss_dssp TEEEESCCCHHHHHHHHHHTCSEEEECCSSC-CCH----HHHHHHHHHTCEEEECCCCCCCGGGCCCCHHHHHHHHHHHH
T ss_pred CeEECCCcCccCHHHHHHCCCCEEEECCCCC-cCh----hHHHHHHhcCCeEEecccccccCccccCCHHHHHHHHHHHH
Confidence 4999999999999999999999999999875 211 2234566679999999998653 346788888888776
Q ss_pred cCCCCcEEEeCccCCchHHHHHHHHHHhcCCCHHHHHHHhhccccc
Q 002281 344 NSSKKPLYLHSKEGVWRTYAMVSRWRQYMARCASQISGQTITSNDV 389 (943)
Q Consensus 344 ds~~~PVLVHC~AGKDRTGALvaLlr~~lGvs~edAiaDYLlsn~~ 389 (943)
+..++||||||++|+||||+++++++.+.|++.++|+++|..++..
T Consensus 89 ~~~~~~vlvHC~aG~~RTg~~~a~~l~~~g~~~~~a~~~~~~~~~~ 134 (151)
T 1xri_A 89 DEKNHPVLIHCKRGKHRTGCLVGCLRKLQKWCLTSIFDEYQRFAAA 134 (151)
T ss_dssp CGGGCSEEEECSSSSSHHHHHHHHHHHHTTBCHHHHHHHHHHHHGG
T ss_pred cCCCCCEEEECCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHhcCC
Confidence 5567899999999999999999999888999999999999977665
No 10
>2f46_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.41A {Neisseria meningitidis Z2491}
Probab=99.75 E-value=5.6e-18 Score=165.43 Aligned_cols=118 Identities=19% Similarity=0.205 Sum_probs=97.9
Q ss_pred ceEEEcCCCCHhhHHHHHHcCCcEEEEcCCCccc-CcchhhhhHHhhhcCCcE-EEEEecCCCCCCCHHHHHHHHHHHhc
Q 002281 267 VTFCRGGQVTEEGLKWLMEKGYKTIVDIRAERVK-DNFYEAAIDDAILSGKVE-LIKIPVEVRTAPTMEQVEKFASLVSN 344 (943)
Q Consensus 267 ~~LYRSGqpT~eDLa~Lk~lGIKTVIDLRse~~e-e~~~~a~e~e~~e~~GI~-yIhIPV~d~~~Ps~E~v~aFlelL~d 344 (943)
..||||++++++++++|+++||++|||||++.+. ..+....+.++++..||+ |+|+|+.+. .++.+.+.+|.+++.
T Consensus 22 ~~l~rs~~~~~~d~~~L~~~Gi~~IIdlR~~~E~~~~p~~~~~~~~~~~~gi~~~~~iPv~~~-~~~~~~~~~~~~~l~- 99 (156)
T 2f46_A 22 EHLYISPQLTKADAEQIAQLGIKTIICNRPDREEESQPDFAQIKQWLEQAGVTGFHHQPVTAR-DIQKHDVETFRQLIG- 99 (156)
T ss_dssp TTEEEESCCCGGGHHHHHHHTCCEEEECSCTTSSTTCCCHHHHHHHHGGGTCCEEEECCCCTT-TCCHHHHHHHHHHHH-
T ss_pred CCEEEcCCCCHHHHHHHHHCCCCEEEECCCCccccCCCcHHHHHHHHHHCCCHhheECccCCC-CCCHHHHHHHHHHHH-
Confidence 3699999999999999999999999999987521 111112344567778999 999999865 788999999999985
Q ss_pred CCCCcEEEeCccCCchHHHHHHHHHHhcCCCHHHHHHHhhccc
Q 002281 345 SSKKPLYLHSKEGVWRTYAMVSRWRQYMARCASQISGQTITSN 387 (943)
Q Consensus 345 s~~~PVLVHC~AGKDRTGALvaLlr~~lGvs~edAiaDYLlsn 387 (943)
..++||||||++|+ |+++++++++...|++.++|++++-...
T Consensus 100 ~~~~pVlvHC~sG~-Rs~~l~al~l~~~g~~~~~a~~~~~~~g 141 (156)
T 2f46_A 100 QAEYPVLAYCRTGT-RCSLLWGFRRAAEGMPVDEIIRRAQAAG 141 (156)
T ss_dssp TSCSSEEEECSSSH-HHHHHHHHHHHHTTCCHHHHHHHHHHTT
T ss_pred hCCCCEEEECCCCC-CHHHHHHHHHHHcCCCHHHHHHHHHHcC
Confidence 45889999999999 9999999988888999999999887553
No 11
>4erc_A Dual specificity protein phosphatase 23; alpha beta, phosphatase(hydrolase), hydrolase; 1.15A {Homo sapiens} PDB: 2img_A
Probab=99.70 E-value=8.1e-17 Score=153.37 Aligned_cols=116 Identities=12% Similarity=0.135 Sum_probs=95.4
Q ss_pred cceEEEcCCC-CHhhHHHHHHcCCcEEEEcCCCcccCcchhhhhHHhhhcCCcEEEEEecCCCCCCCHHHHHHHHHHHhc
Q 002281 266 EVTFCRGGQV-TEEGLKWLMEKGYKTIVDIRAERVKDNFYEAAIDDAILSGKVELIKIPVEVRTAPTMEQVEKFASLVSN 344 (943)
Q Consensus 266 e~~LYRSGqp-T~eDLa~Lk~lGIKTVIDLRse~~ee~~~~a~e~e~~e~~GI~yIhIPV~d~~~Ps~E~v~aFlelL~d 344 (943)
+..||||++| ++++++.|+++||++||||+.+. +. .. ....|++|+++|+.+...|+.+.+..+.+++.+
T Consensus 13 ~~~l~~~~~p~~~~~~~~L~~~gi~~Vi~l~~~~-~~-~~-------~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~i~~ 83 (150)
T 4erc_A 13 PGRLAGLALPRLPAHYQFLLDLGVRHLVSLTERG-PP-HS-------DSCPGLTLHRLRIPDFCPPAPDQIDRFVQIVDE 83 (150)
T ss_dssp TTTEEEESCCCSHHHHHHHHHTTEEEEEECSSSC-CT-TG-------GGCTTSEEEECCCCTTSCCCHHHHHHHHHHHHH
T ss_pred cCceeeecCCCCHHHHHHHHHCCCCEEEEcCCCC-CC-cc-------cccCCceEEEEecCCCCCCCHHHHHHHHHHHHH
Confidence 3469999999 89999999999999999999975 22 11 234699999999999988999999888888754
Q ss_pred --CCCCcEEEeCccCCchHHHHHHHHHHh-cCCCHHHHHHHhhcccccc
Q 002281 345 --SSKKPLYLHSKEGVWRTYAMVSRWRQY-MARCASQISGQTITSNDVL 390 (943)
Q Consensus 345 --s~~~PVLVHC~AGKDRTGALvaLlr~~-lGvs~edAiaDYLlsn~~~ 390 (943)
..++||||||.+|+||||+++++++.. .|++.++|++.+-...+..
T Consensus 84 ~~~~~~~vlVHC~~G~~Rsg~~~a~~l~~~~~~~~~~a~~~vr~~R~~~ 132 (150)
T 4erc_A 84 ANARGEAVGVHCALGFGRTGTMLACYLVKERGLAAGDAIAEIRRLRPGS 132 (150)
T ss_dssp HHHTTCEEEEECSSSSHHHHHHHHHHHHHHHTCCHHHHHHHHHHHSTTC
T ss_pred HHHCCCCEEEECCCCCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHCCCC
Confidence 356899999999999999888876554 7999999998776544443
No 12
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=99.65 E-value=5.7e-17 Score=176.27 Aligned_cols=210 Identities=13% Similarity=0.111 Sum_probs=142.3
Q ss_pred CCEEEEEecCCh---hHHHHHHHHHHHHhcCCCeEEEEcCChh-hhhhcCCCCccceeeeccCccccccCccEEEEEcCC
Q 002281 690 PRTVLVLKKPGP---ALMEEAKEVASFLYHQEKMNILVEPDVH-DIFARIPGFGFVQTFYLQDTSDLHERVDFVACLGGD 765 (943)
Q Consensus 690 pk~VlIv~K~~~---~~~~~a~~l~~~L~~~~g~~V~ve~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~DlVIvLGGD 765 (943)
.++++||..+.. ...+.+.++..+|.+ .++++.+..... ..... + ......+++|+||++|||
T Consensus 24 m~~i~vI~NP~sg~~~~~~~~~~i~~~L~~-~g~~~~~~~t~~~~~a~~---------~---~~~~~~~~~d~vvv~GGD 90 (337)
T 2qv7_A 24 RKRARIIYNPTSGKEQFKRELPDALIKLEK-AGYETSAYATEKIGDATL---------E---AERAMHENYDVLIAAGGD 90 (337)
T ss_dssp CEEEEEEECTTSTTSCHHHHHHHHHHHHHH-TTEEEEEEECCSTTHHHH---------H---HHHHTTTTCSEEEEEECH
T ss_pred cceEEEEECCCCCCCchHHHHHHHHHHHHH-cCCeEEEEEecCcchHHH---------H---HHHHhhcCCCEEEEEcCc
Confidence 467888887774 245667889999965 477766543211 11100 0 001123468999999999
Q ss_pred chHHHHhhhc--cCCCCcEEEEeCCCCcccCCC--CchhHHHHHHHHHcCCCC-CCceeeeeeeEE-EEEE------EeC
Q 002281 766 GVILHASNLF--RGAVPPVISFNLGSLGFLTSH--PFEDYRQDLRQVIYGNNT-LDGVYITLRMRL-CCEI------FRN 833 (943)
Q Consensus 766 GTiL~Aar~~--~~~~~PVLGIN~GsLGFLt~~--~~ed~~~~L~~ll~G~~~-v~~~~i~~R~rL-~~~V------~r~ 833 (943)
||++.+++.+ .+..+|+.+|++|+.+||+.. -+.++.++++.+++|++. +|-..+..|..+ .+.+ .++
T Consensus 91 GTv~~v~~~l~~~~~~~pl~iIP~GT~N~lAr~Lg~~~~~~~al~~i~~g~~~~iD~g~v~~r~fl~~~~~G~~a~v~~~ 170 (337)
T 2qv7_A 91 GTLNEVVNGIAEKPNRPKLGVIPMGTVNDFGRALHIPNDIMGALDVIIEGHSTKVDIGKMNNRYFINLAAGGQLTQVSYE 170 (337)
T ss_dssp HHHHHHHHHHTTCSSCCEEEEEECSSCCHHHHHTTCCSSHHHHHHHHHHTCEEEEEEEEETTEEESSEEEEECBCC----
T ss_pred hHHHHHHHHHHhCCCCCcEEEecCCcHhHHHHHcCCCCCHHHHHHHHHcCCcEEEEEEEECCEEEEEEeeecccHHHHHH
Confidence 9999999998 667899999999999999975 467888999999999743 110112234222 2222 110
Q ss_pred --C--eecCCc---cccceeeEEEecCCCCeeEEEEEEECCEEeEEEeeCeEEeCCCcchHHHhhhcCCCCCCC------
Q 002281 834 --G--KAMPGK---VFDVLNEVVVDRGSNPYLSKIECYEHDRLITKVQGDGVIVATPTGSTAYSTAAGGSMVHP------ 900 (943)
Q Consensus 834 --G--~~~~~~---~~~ALNEVvI~Rg~~~~l~~i~v~idg~~v~~~rgDGlIVSTPTGSTAYslSAGGPIV~P------ 900 (943)
. +...+. ...+||++.- .+..+++|++||+. +++|+++|+|++||| ++|||++.|
T Consensus 171 ~~~~~k~~~G~~~Y~~~~l~~l~~-----~~~~~~~i~~dg~~---~~~~~~~v~v~n~~~----~gGg~~i~P~a~~~D 238 (337)
T 2qv7_A 171 TPSKLKSIVGPFAYYIKGFEMLPQ-----MKAVDLRIEYDGNV---FQGEALLFFLGLTNS----MAGFEKLVPDAKLDD 238 (337)
T ss_dssp ---------CGGGSCCCTTTTGGG-----BCCEEEEEEETTEE---EEEEEEEEEEESSCC----CSSCSCSSTTCCSSS
T ss_pred hhHHHHhccChHHHHHHHHHHHHh-----CCCccEEEEECCEE---EEeeEEEEEEECCCC----CCCCCccCCCCcCCC
Confidence 0 000011 1235666642 24568899999987 679999999999997 899999999
Q ss_pred -CCCeEEEEEccCCCC-CCCCEEecC
Q 002281 901 -NVPCMLFTPICPHSL-SFRPVILPD 924 (943)
Q Consensus 901 -~v~~ivlTPIcPhsL-s~RPlVLp~ 924 (943)
.+++++++|+|||.+ ..+|.+++.
T Consensus 239 G~ldv~~v~~~~~~~l~~~~~~v~~g 264 (337)
T 2qv7_A 239 GYFTLIIVEKSNLAELGHIMTLASRG 264 (337)
T ss_dssp SCEEEEEEECCCHHHHHHHHHHHTTT
T ss_pred CeEEEEEEccCCHHHHHHHHHHHhcC
Confidence 689999999999986 566666653
No 13
>2img_A Dual specificity protein phosphatase 23; DUSP23, VHZ, LDP-3, dual specicity protein phosphatase 23, DUS23_human, malate, structural genomics, PSI; 1.93A {Homo sapiens}
Probab=99.65 E-value=8.5e-16 Score=145.91 Aligned_cols=113 Identities=13% Similarity=0.181 Sum_probs=92.5
Q ss_pred ceEEEcCCC-CHhhHHHHHHcCCcEEEEcCCCcccCcchhhhhHHhhhcCCcEEEEEecCCCCCCCHHHHHHHHHHHhc-
Q 002281 267 VTFCRGGQV-TEEGLKWLMEKGYKTIVDIRAERVKDNFYEAAIDDAILSGKVELIKIPVEVRTAPTMEQVEKFASLVSN- 344 (943)
Q Consensus 267 ~~LYRSGqp-T~eDLa~Lk~lGIKTVIDLRse~~ee~~~~a~e~e~~e~~GI~yIhIPV~d~~~Ps~E~v~aFlelL~d- 344 (943)
..||||++| ++++++.|+++||++||||+.+. +.+. . ...++.|+++|+.+...|+.+.+.++.+++.+
T Consensus 15 ~~l~~~~~p~~~~~~~~l~~~gi~~Vv~l~~~~-e~~~------~--~~~~~~~~~~~~~d~~~p~~~~~~~~~~~i~~~ 85 (151)
T 2img_A 15 GRLAGLALPRLPAHYQFLLDLGVRHLVSLTERG-PPHS------D--SCPGLTLHRLRIPDFCPPAPDQIDRFVQIVDEA 85 (151)
T ss_dssp TTEEEESCCCSHHHHHHHHHTTEEEEEECSSSC-CTTG------G--GCTTSEEEECCCCTTCCCCHHHHHHHHHHHHHH
T ss_pred CceeeeCCCCcHHHHHHHHHCCCCEEEECCCCC-CCCH------H--HHhhCCeEEEeCCCCCCCCHHHHHHHHHHHHHH
Confidence 369999999 89999999999999999999875 2111 1 12357799999998888998888888888754
Q ss_pred -CCCCcEEEeCccCCchHHHHHHHHHHhc-CCCHHHHHHHhhcccc
Q 002281 345 -SSKKPLYLHSKEGVWRTYAMVSRWRQYM-ARCASQISGQTITSND 388 (943)
Q Consensus 345 -s~~~PVLVHC~AGKDRTGALvaLlr~~l-Gvs~edAiaDYLlsn~ 388 (943)
..++||||||++|+||||+++++++... |++.++|++.+-...+
T Consensus 86 ~~~~~~vlVHC~aG~~Rsg~~~~~~l~~~~~~~~~~a~~~~r~~R~ 131 (151)
T 2img_A 86 NARGEAVGVHCALGFGRTGTMLACYLVKERGLAAGDAIAEIRRLRP 131 (151)
T ss_dssp HHTTCEEEEECSSSSSHHHHHHHHHHHHHHCCCHHHHHHHHHHHST
T ss_pred HhCCCcEEEECCCCCChHHHHHHHHHHHHhCcCHHHHHHHHHHHCC
Confidence 3578999999999999999998887766 9999999987654433
No 14
>2i6j_A Ssoptp, sulfolobus solfataricus protein tyrosine phosphatase; PTP domain, hydrolase; 1.66A {Sulfolobus solfataricus} PDB: 2i6i_A 2i6m_A 3ro1_A* 2i6o_A* 2dxp_A* 2i6p_A*
Probab=99.63 E-value=9.6e-16 Score=147.56 Aligned_cols=119 Identities=11% Similarity=0.088 Sum_probs=94.9
Q ss_pred ceEEEcCCCC-HhhHHHHHHcCCcEEEEcCCCcccCcch---hhhhHHhhhcCCcEEEEEecCCCCCCCHHHHHHHHHHH
Q 002281 267 VTFCRGGQVT-EEGLKWLMEKGYKTIVDIRAERVKDNFY---EAAIDDAILSGKVELIKIPVEVRTAPTMEQVEKFASLV 342 (943)
Q Consensus 267 ~~LYRSGqpT-~eDLa~Lk~lGIKTVIDLRse~~ee~~~---~a~e~e~~e~~GI~yIhIPV~d~~~Ps~E~v~aFlelL 342 (943)
..||||++|+ ++|++.|+++||++|||||++. +.... ...+.+.+...|++|+++|+.+...|+.+.+.+|++++
T Consensus 7 ~~l~~~~~~~~~~d~~~L~~~gi~~Vi~l~~~~-e~~~~~~~~~~~~~~~~~~gi~~~~~p~~d~~~p~~~~~~~~~~~i 85 (161)
T 2i6j_A 7 KTIGGSGLPYTENEILEWRKEGVKRVLVLPEDW-EIEESWGDKDYYLSILKKNGLQPLHIPIPDGGVPSDSQFLTIMKWL 85 (161)
T ss_dssp TTEEEECCCSSHHHHHHHHHHTCCEEEECSCHH-HHHHHHSCHHHHHHHHHHTTCEEEECCCCTTCCCCHHHHHHHHHHH
T ss_pred cceeecCCCCCHHHHHHHHHCCCCEEEEcCchh-hhhhhccchhhHHHHHHHcCceEEEecCCCCCCCChHHHHHHHHHH
Confidence 3699999998 6899999999999999999874 11111 01233446778999999999888889989999999998
Q ss_pred hcCCCCcEEEeCccCCchHHHHHHHHHHhc-CCCHHHHHHHhhccc
Q 002281 343 SNSSKKPLYLHSKEGVWRTYAMVSRWRQYM-ARCASQISGQTITSN 387 (943)
Q Consensus 343 ~ds~~~PVLVHC~AGKDRTGALvaLlr~~l-Gvs~edAiaDYLlsn 387 (943)
.+....+ ||||++|++|||+++++++... |++.++|++..-...
T Consensus 86 ~~~~~~~-lVHC~aG~~Rtg~~~~~~l~~~~~~~~~~a~~~~r~~R 130 (161)
T 2i6j_A 86 LSEKEGN-LVHCVGGIGRTGTILASYLILTEGLEVESAIDEVRLVR 130 (161)
T ss_dssp HHCCTTE-EEECSSSSHHHHHHHHHHHHHHHCCCHHHHHHHHHHHS
T ss_pred HHhCCCC-EEECCCCCCHHHHHHHHHHHHHcCCCHHHHHHHHHHhC
Confidence 6554445 9999999999999999888766 999999988654433
No 15
>3rgo_A Protein-tyrosine phosphatase mitochondrial 1; phosphatidylglycerol phosphate (PGP) phosphatase, hydrolase; 1.93A {Mus musculus} PDB: 3rgq_A*
Probab=99.63 E-value=3e-15 Score=143.54 Aligned_cols=125 Identities=14% Similarity=0.176 Sum_probs=94.2
Q ss_pred ceEEEcCCCCHhhHHHH-HHcCCcEEEEcCCCcccCcchhhhhHHhhhcCCcEEEEEecCCCC-CCCHHHHHHHHHHHhc
Q 002281 267 VTFCRGGQVTEEGLKWL-MEKGYKTIVDIRAERVKDNFYEAAIDDAILSGKVELIKIPVEVRT-APTMEQVEKFASLVSN 344 (943)
Q Consensus 267 ~~LYRSGqpT~eDLa~L-k~lGIKTVIDLRse~~ee~~~~a~e~e~~e~~GI~yIhIPV~d~~-~Ps~E~v~aFlelL~d 344 (943)
+.||+|+++...+...+ +++||++||||+.+. +...+. ...+.+...|++|+++|+.+.. .+..+.+.++++++.+
T Consensus 7 ~~l~~g~~~~~~~~~~ll~~~gi~~Vi~l~~~~-e~~~~~-~~~~~~~~~gi~~~~~p~~d~~~~~~~~~~~~~~~~i~~ 84 (157)
T 3rgo_A 7 HTVLLGALPLKNMTRRLVLDENVRGVITMNEEY-ETRFLC-NTSKEWKKAGVEQLRLSTVDMTGVPTLANLHKGVQFALK 84 (157)
T ss_dssp SSEEEESCCCGGGHHHHHHHSCEEEEEEESCCT-TTTTSS-CCHHHHHHTTCEEEEECCCTTTSSCCHHHHHHHHHHHHH
T ss_pred CCeEEecCcCccchHHHHHHcCCCEEEECcccc-cccccc-CCHHHHHHCCCeEEEecCCCCCCCChHHHHHHHHHHHHH
Confidence 47999999998877666 899999999999885 222111 1234466789999999999874 7788888877777643
Q ss_pred --CCCCcEEEeCccCCchHHHHHHHHHHh-cCCCHHHHHHHhhccccccccc
Q 002281 345 --SSKKPLYLHSKEGVWRTYAMVSRWRQY-MARCASQISGQTITSNDVLLKD 393 (943)
Q Consensus 345 --s~~~PVLVHC~AGKDRTGALvaLlr~~-lGvs~edAiaDYLlsn~~~~~~ 393 (943)
..++||||||.+|++|||+++++++.. .|++.++|++..-...+...-+
T Consensus 85 ~~~~~~~vlVHC~~G~~Rsg~~~~a~l~~~~~~~~~~a~~~v~~~R~~~~~~ 136 (157)
T 3rgo_A 85 YQALGQCVYVHCKAGRSRSATMVAAYLIQVHNWSPEEAIEAIAKIRSHISIR 136 (157)
T ss_dssp HHHTTCEEEEESSSSSSHHHHHHHHHHHHHHTCCHHHHHHHHHHHSTTCCCC
T ss_pred HHHCCCEEEEECCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHHCCCCCCC
Confidence 246799999999999999886665443 7999999998766554444333
No 16
>1yz4_A DUSP15, dual specificity phosphatase-like 15 isoform A; hydrolase; HET: BOG; 2.40A {Homo sapiens}
Probab=99.56 E-value=1.6e-14 Score=140.65 Aligned_cols=111 Identities=13% Similarity=0.191 Sum_probs=82.3
Q ss_pred ceEEEcCCCCHhhHHHHHHcCCcEEEEcCCCcccCcchhhhhHHhhhcCCcEEEEEecCCCCCCCH-HHHHHHHHHHhc-
Q 002281 267 VTFCRGGQVTEEGLKWLMEKGYKTIVDIRAERVKDNFYEAAIDDAILSGKVELIKIPVEVRTAPTM-EQVEKFASLVSN- 344 (943)
Q Consensus 267 ~~LYRSGqpT~eDLa~Lk~lGIKTVIDLRse~~ee~~~~a~e~e~~e~~GI~yIhIPV~d~~~Ps~-E~v~aFlelL~d- 344 (943)
+.||+|+++++++++.|+++||++||||+.+. .+ ...|++|+++|+.|...++. +.+..+.+++..
T Consensus 13 ~~lylg~~~~~~d~~~L~~~gI~~Vi~l~~~~--~~----------~~~~i~~~~ipi~D~~~~~~~~~~~~~~~~i~~~ 80 (160)
T 1yz4_A 13 PGLYLGNFIDAKDLDQLGRNKITHIISIHESP--QP----------LLQDITYLRIPVADTPEVPIKKHFKECINFIHCC 80 (160)
T ss_dssp TTEEEECTTGGGCHHHHHHTTCCEEEEECSSC--CC----------CCTTCEEEEECCCSCTTSCGGGGHHHHHHHHHHH
T ss_pred CCEEECChhhhcCHHHHHHCCCeEEEEccCCC--CC----------ccCCCeEEEEECCCCCCccHHHHHHHHHHHHHHH
Confidence 36999999999999999999999999999864 21 13589999999987655442 233333333321
Q ss_pred -CCCCcEEEeCccCCchHHHHHHHHH-HhcCCCHHHHHHHhhccccc
Q 002281 345 -SSKKPLYLHSKEGVWRTYAMVSRWR-QYMARCASQISGQTITSNDV 389 (943)
Q Consensus 345 -s~~~PVLVHC~AGKDRTGALvaLlr-~~lGvs~edAiaDYLlsn~~ 389 (943)
..++||||||++|++|||++++.++ ...|++.++|++..-...+.
T Consensus 81 ~~~~~~VlVHC~aG~~RSg~~~~aylm~~~~~~~~~a~~~v~~~R~~ 127 (160)
T 1yz4_A 81 RLNGGNCLVHSFAGISRSTTIVTAYVMTVTGLGWRDVLEAIKATRPI 127 (160)
T ss_dssp HHTTCCEEEEETTSSSHHHHHHHHHHHHHHCCCHHHHHHHHHHTCTT
T ss_pred HHcCCeEEEECCCCCchHHHHHHHHHHHHcCCCHHHHHHHHHHHCCC
Confidence 2478999999999999997766655 34699999999654433333
No 17
>2e0t_A Dual specificity phosphatase 26; conserved hypothetical protein, structural genomics, NPPSFA, project on protein structural and functional analyses; 1.67A {Homo sapiens}
Probab=99.56 E-value=5.5e-15 Score=141.85 Aligned_cols=111 Identities=13% Similarity=0.102 Sum_probs=82.0
Q ss_pred ceEEEcCCCCHhhHHHHHHcCCcEEEEcCCCcccCcchhhhhHHhhhcCCcEEEEEecCCCCCCC-HHHHHHHHHHHh--
Q 002281 267 VTFCRGGQVTEEGLKWLMEKGYKTIVDIRAERVKDNFYEAAIDDAILSGKVELIKIPVEVRTAPT-MEQVEKFASLVS-- 343 (943)
Q Consensus 267 ~~LYRSGqpT~eDLa~Lk~lGIKTVIDLRse~~ee~~~~a~e~e~~e~~GI~yIhIPV~d~~~Ps-~E~v~aFlelL~-- 343 (943)
+.||+|+++++.+++.|+++||++|||||.+. + ...+ +..+..|++|+++|+.+...++ .+.+..+.+++.
T Consensus 7 ~~ly~g~~~~~~d~~~L~~~gi~~Vi~l~~~~-~-~~~~----~~~~~~~i~~~~ip~~d~~~~~l~~~~~~~~~~i~~~ 80 (151)
T 2e0t_A 7 PGLYLGDQDMANNRRELRRLGITHVLNASHSR-W-RGTP----EAYEGLGIRYLGVEAHDSPAFDMSIHFQTAADFIHRA 80 (151)
T ss_dssp TTEEEECHHHHTCHHHHHHHTCCEEEETTCCT-T-CCSC----TTHHHHTCEEEECCCCSSTTSCTHHHHHHHHHHHHHH
T ss_pred CCeEECChhHhCCHHHHHHcCCCEEEEccCCc-c-cCCc----cccCCCCeEEEEEecccCCCccHHHHHHHHHHHHHHH
Confidence 35999999999999999999999999999875 2 1111 2233469999999998654433 234444444443
Q ss_pred -cCCCCcEEEeCccCCchHHHHHHHH-HHhcCCCHHHHHHHh
Q 002281 344 -NSSKKPLYLHSKEGVWRTYAMVSRW-RQYMARCASQISGQT 383 (943)
Q Consensus 344 -ds~~~PVLVHC~AGKDRTGALvaLl-r~~lGvs~edAiaDY 383 (943)
...++||||||++|++|||++++.| +...|++.++|++..
T Consensus 81 ~~~~~~~vlVHC~aG~~RSg~~~~ayl~~~~~~~~~~a~~~v 122 (151)
T 2e0t_A 81 LSQPGGKILVHCAVGVSRSATLVLAYLMLYHHLTLVEAIKKV 122 (151)
T ss_dssp HHSTTCCEEEECSSSSHHHHHHHHHHHHHHSCCCHHHHHHHH
T ss_pred HhcCCCcEEEECCCCCChHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 2257899999999999999666554 445799999999743
No 18
>3f81_A Dual specificity protein phosphatase 3; hydrolase, protein dual-specificity phosphatase, inhibitor; HET: STT; 1.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1vhr_A* 1j4x_A*
Probab=99.55 E-value=1.4e-14 Score=143.47 Aligned_cols=129 Identities=10% Similarity=0.072 Sum_probs=93.8
Q ss_pred CCCCceeeeccCCccccccCCCcceEEEcCCCCHhhHHHHHHcCCcEEEEcCCCcccCcchhhhhHHhhhcCCcEEEEEe
Q 002281 244 LFANWSPVYLSNSKDDIASKDSEVTFCRGGQVTEEGLKWLMEKGYKTIVDIRAERVKDNFYEAAIDDAILSGKVELIKIP 323 (943)
Q Consensus 244 ~iaNwr~V~l~~~~d~~~~~~~e~~LYRSGqpT~eDLa~Lk~lGIKTVIDLRse~~ee~~~~a~e~e~~e~~GI~yIhIP 323 (943)
+..||..|. +.||+|+++++.+++.|+++||++||||+.+. +.... ....+..+..|++|+++|
T Consensus 24 p~~~~~~I~--------------p~Lylg~~~~a~d~~~L~~~gI~~Vi~l~~~~-~~~~~-~~~~~~~~~~gi~~~~ip 87 (183)
T 3f81_A 24 PSQPCNEVT--------------PRIYVGNASVAQDIPKLQKLGITHVLNAAEGR-SFMHV-NTNANFYKDSGITYLGIK 87 (183)
T ss_dssp CSSSEEEEE--------------TTEEEECHHHHTCHHHHHHHTCCEEEETTBSS-STTSB-CCCTGGGTTTTCEEEECC
T ss_pred CCcCcceEe--------------CCEEECCchhhhCHHHHHHCCCcEEEECCCCc-ccccc-ccchhhcccCCCEEEEEE
Confidence 356777775 36999999999999999999999999999875 21100 012234566899999999
Q ss_pred cCCCCCCCH-HHHH---HHHHHHhcCCCCcEEEeCccCCchHHHHHHHHHH-hcCCCHHHHHHHhhcccc
Q 002281 324 VEVRTAPTM-EQVE---KFASLVSNSSKKPLYLHSKEGVWRTYAMVSRWRQ-YMARCASQISGQTITSND 388 (943)
Q Consensus 324 V~d~~~Ps~-E~v~---aFlelL~ds~~~PVLVHC~AGKDRTGALvaLlr~-~lGvs~edAiaDYLlsn~ 388 (943)
+.|...++. +.+. +|++......++||||||.+|++|||+++++|+. ..|++.++|++..-...+
T Consensus 88 ~~D~~~~~~~~~~~~~~~~i~~~~~~~~~~VlVHC~~G~~RSg~~v~ayLm~~~~~~~~~A~~~v~~~R~ 157 (183)
T 3f81_A 88 ANDTQEFNLSAYFERAADFIDQALAQKNGRVLVHCREGYSRSPTLVIAYLMMRQKMDVKSALSIVRQNRE 157 (183)
T ss_dssp CCCSTTSCGGGGHHHHHHHHHHHHHSTTCCEEEECSSSSSHHHHHHHHHHHHHHCCCHHHHHHHHHHHSC
T ss_pred cCCCCcccHHHHHHHHHHHHHHHHHcCCCeEEEECCCCcchHHHHHHHHHHHHhCCCHHHHHHHHHHcCC
Confidence 998766553 2333 3433332333789999999999999987766654 479999999986554444
No 19
>1zzw_A Dual specificity protein phosphatase 10; MKP, PTP, hydrolase; 1.60A {Homo sapiens}
Probab=99.55 E-value=4.1e-14 Score=135.73 Aligned_cols=113 Identities=12% Similarity=0.157 Sum_probs=85.0
Q ss_pred ceEEEcCCCCHhhHHHHHHcCCcEEEEcCCCcccCcchhhhhHHhhhcCCcEEEEEecCCCCCCC-HHHHHHHHHHHhc-
Q 002281 267 VTFCRGGQVTEEGLKWLMEKGYKTIVDIRAERVKDNFYEAAIDDAILSGKVELIKIPVEVRTAPT-MEQVEKFASLVSN- 344 (943)
Q Consensus 267 ~~LYRSGqpT~eDLa~Lk~lGIKTVIDLRse~~ee~~~~a~e~e~~e~~GI~yIhIPV~d~~~Ps-~E~v~aFlelL~d- 344 (943)
+.||+|+++++++++.|+++||++||||+.+. +.+ .....|++|+++|+.|...++ .+.+.++.+++..
T Consensus 9 ~~ly~g~~~~~~d~~~L~~~gi~~Vi~l~~e~---p~~------~~~~~~~~~~~ipi~D~~~~~~~~~~~~~~~~i~~~ 79 (149)
T 1zzw_A 9 PFLFLGNEQDAQDLDTMQRLNIGYVINVTTHL---PLY------HYEKGLFNYKRLPATDSNKQNLRQYFEEAFEFIEEA 79 (149)
T ss_dssp TTEEEECTTGGGCHHHHHHTTEEEEEECCSSS---CCT------TGGGTCSEEEECCCCCSSSCCCHHHHHHHHHHHHHH
T ss_pred CCeEECChhHhhCHHHHHHCCCcEEEEecCCC---CCc------ccCCCCeEEEEEECCCCCcccHHHHHHHHHHHHHHH
Confidence 36999999999999999999999999999753 211 134579999999998765443 3444444444432
Q ss_pred -CCCCcEEEeCccCCchHHHHHHHHHH-hcCCCHHHHHHHhhcccc
Q 002281 345 -SSKKPLYLHSKEGVWRTYAMVSRWRQ-YMARCASQISGQTITSND 388 (943)
Q Consensus 345 -s~~~PVLVHC~AGKDRTGALvaLlr~-~lGvs~edAiaDYLlsn~ 388 (943)
..++||||||++|++|||+++++|+. ..|++.++|++..-...+
T Consensus 80 ~~~~~~VlVHC~~G~~RSg~~~~ayl~~~~~~~~~~a~~~v~~~R~ 125 (149)
T 1zzw_A 80 HQCGKGLLIHCQAGVSRSATIVIAYLMKHTRMTMTDAYKFVKGKRP 125 (149)
T ss_dssp HHTTCEEEEECSSSSSHHHHHHHHHHHHHSCCCHHHHHHHHHHHCT
T ss_pred HHcCCeEEEECCCCCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHCC
Confidence 25789999999999999988776654 479999999984433333
No 20
>1rxd_A Protein tyrosine phosphatase type IVA, member 1; protein tyrosine phosphatase IVA1...; structural genomics, NYSGXRC, unknown function, PSI; 1.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1xm2_A 1zck_A 1r6h_A 1v3a_A
Probab=99.53 E-value=4.8e-14 Score=134.91 Aligned_cols=114 Identities=16% Similarity=0.129 Sum_probs=88.4
Q ss_pred ceEEEcCCCCH---hh-HHHHHHcCCcEEEEcCCCcccCcchhhhhHHhhhcCCcEEEEEecCCCCCCCHHHHHHHHHHH
Q 002281 267 VTFCRGGQVTE---EG-LKWLMEKGYKTIVDIRAERVKDNFYEAAIDDAILSGKVELIKIPVEVRTAPTMEQVEKFASLV 342 (943)
Q Consensus 267 ~~LYRSGqpT~---eD-La~Lk~lGIKTVIDLRse~~ee~~~~a~e~e~~e~~GI~yIhIPV~d~~~Ps~E~v~aFlelL 342 (943)
..+||++.|.+ +| ++.|.++||++||+|+... ..+ ......|++|+++|+.+...++.+.+..+++.+
T Consensus 16 ~~~i~s~~p~~~t~~df~~~l~~~gi~~Iv~l~~~~-~~~-------~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~i 87 (159)
T 1rxd_A 16 MRFLITHNPTNATLNKFIEELKKYGVTTIVRVCEAT-YDT-------TLVEKEGIHVLDWPFDDGAPPSNQIVDDWLSLV 87 (159)
T ss_dssp EEEEECCCCCGGGHHHHHHHHHHTTEEEEEECSCCC-SCC-------HHHHHTTCEEEECCC--CCCCCHHHHHHHHHHH
T ss_pred ceEEEeCCCccccHHHHHHHHHHcCCCEEEEcCCCc-cCH-------HHHHHcCCEEEeCCCcCCCCCCHHHHHHHHHHH
Confidence 47999998854 34 7889999999999998764 111 124567999999999877778888877777766
Q ss_pred hc----CCCCcEEEeCccCCchHHHHHHHHHHhcCCCHHHHHHHhhcccc
Q 002281 343 SN----SSKKPLYLHSKEGVWRTYAMVSRWRQYMARCASQISGQTITSND 388 (943)
Q Consensus 343 ~d----s~~~PVLVHC~AGKDRTGALvaLlr~~lGvs~edAiaDYLlsn~ 388 (943)
.+ ..++||||||++|+||||+++++++...|++.++|++..-...+
T Consensus 88 ~~~~~~~~~~~vlVHC~aG~~Rtg~~~a~~l~~~~~~~~~a~~~vr~~R~ 137 (159)
T 1rxd_A 88 KIKFREEPGCCIAVHCVAGLGRAPVLVALALIEGGMKYEDAVQFIRQKRR 137 (159)
T ss_dssp HHHHHHSTTCEEEEECSSSSTTHHHHHHHHHHHTTCCHHHHHHHHHTTCT
T ss_pred HHHHHhCCCCeEEEECCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHCC
Confidence 42 35689999999999999999999888889999999876554433
No 21
>3s4o_A Protein tyrosine phosphatase-like protein; structural genomics, medical structural genomics of pathogen protozoa, MSGPP, unknown function; HET: MSE EPE; 2.30A {Leishmania major}
Probab=99.52 E-value=8.7e-14 Score=134.14 Aligned_cols=109 Identities=15% Similarity=0.143 Sum_probs=88.1
Q ss_pred eEEEcCCCC----HhhHHHHHHcCCcEEEEcCCCcccCcchhhhhHHhhhcCCcEEEEEecCCCCCCCHHHHHHHHHHHh
Q 002281 268 TFCRGGQVT----EEGLKWLMEKGYKTIVDIRAERVKDNFYEAAIDDAILSGKVELIKIPVEVRTAPTMEQVEKFASLVS 343 (943)
Q Consensus 268 ~LYRSGqpT----~eDLa~Lk~lGIKTVIDLRse~~ee~~~~a~e~e~~e~~GI~yIhIPV~d~~~Ps~E~v~aFlelL~ 343 (943)
++.++..|. +++++.|.++||++||||+.+. .. ....+..|++|+++|+.+...|+.+.+..|.+++.
T Consensus 24 ~~i~tq~P~~~t~~~~~~~l~~~gi~~Iv~l~~~~-~~-------~~~~~~~~i~~~~~p~~d~~~p~~~~~~~~~~~i~ 95 (167)
T 3s4o_A 24 HFLILDAPSPSNLPTYIKELQHRGVRHLVRVCGPT-YD-------ATLVKSRGIDVHSWPFDDGAPPTRAVLDSWLKLLD 95 (167)
T ss_dssp EEEEECCCCGGGHHHHHHHHHTTTEEEEEECSCCC-SC-------THHHHTTTCEEEECCCCTTCCCCHHHHHHHHHHHH
T ss_pred eEEEeCCCchhhHHHHHHHHHHCCCCEEEECCCCC-CC-------HHHHHHCCCeEEEeccCCCCCCCHHHHHHHHHHHH
Confidence 577777775 4467889999999999999874 11 13356689999999999888999888887777664
Q ss_pred c----------CCCCcEEEeCccCCchHHHHHHHHHHhc-CCCHHHHHHHhh
Q 002281 344 N----------SSKKPLYLHSKEGVWRTYAMVSRWRQYM-ARCASQISGQTI 384 (943)
Q Consensus 344 d----------s~~~PVLVHC~AGKDRTGALvaLlr~~l-Gvs~edAiaDYL 384 (943)
. ..++||||||++|+||||+++++++... |++.++|++..-
T Consensus 96 ~~~~~~~~~~~~~~~~vlVHC~aG~~RTg~~~a~~L~~~~~~~~~~a~~~vr 147 (167)
T 3s4o_A 96 TELARQQEDPSVPPPTIGVHCVAGLGRAPILVALALVEYGNVSALDAIALIR 147 (167)
T ss_dssp HHHHHHHHCTTCCCCEEEEECSSSSSHHHHHHHHHHHHTTCCCHHHHHHHHH
T ss_pred HHHHHHhhccccCCCcEEEECCCCCCHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 2 3378999999999999999999988777 999999987543
No 22
>1fpz_A Cyclin-dependent kinase inhibitor 3; alpha-beta sandwich, hydrolase; 2.00A {Homo sapiens} SCOP: c.45.1.1 PDB: 1fq1_A*
Probab=99.51 E-value=4.9e-14 Score=143.46 Aligned_cols=108 Identities=12% Similarity=0.115 Sum_probs=86.1
Q ss_pred CHhhHHHHHHcCCcEEEEcCCCcccCcchh-hhhHHhhhcCCcEEEEEecCCCCCCCHHHHHHHHHHHhc--CCCCcEEE
Q 002281 276 TEEGLKWLMEKGYKTIVDIRAERVKDNFYE-AAIDDAILSGKVELIKIPVEVRTAPTMEQVEKFASLVSN--SSKKPLYL 352 (943)
Q Consensus 276 T~eDLa~Lk~lGIKTVIDLRse~~ee~~~~-a~e~e~~e~~GI~yIhIPV~d~~~Ps~E~v~aFlelL~d--s~~~PVLV 352 (943)
.+++++.|+++||++||||+.+. |...+. ....+.+...|++|+++|+.+...|+.+.+..+++++.. ..++||||
T Consensus 60 ~~~d~~~L~~~gi~~Vv~l~~~~-E~~~~~~~~~~~~~~~~gi~~~~~pi~d~~~p~~~~~~~~~~~i~~~~~~~~~VlV 138 (212)
T 1fpz_A 60 VQKDTEELKSCGIQDIFVFCTRG-ELSKYRVPNLLDLYQQCGIITHHHPIADGGTPDIASCCEIMEELTTCLKNYRKTLI 138 (212)
T ss_dssp HHHHHHHHHHHTCCEEEECCCHH-HHHHTTCTTHHHHHHHTTCEEEECCCCTTCCCCHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHHCCCCEEEEcCCHH-HHHhcCCccHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHHHHHHHHHhCCCCEEE
Confidence 47899999999999999999874 211111 122345677899999999998888988888888887743 25789999
Q ss_pred eCccCCchHHHHHHHHHHhc--CCCHHHHHHHhh
Q 002281 353 HSKEGVWRTYAMVSRWRQYM--ARCASQISGQTI 384 (943)
Q Consensus 353 HC~AGKDRTGALvaLlr~~l--Gvs~edAiaDYL 384 (943)
||++|+||||+++++++..+ |++.++|++..-
T Consensus 139 HC~aG~gRTg~~~a~~L~~~~~g~~~~~a~~~vr 172 (212)
T 1fpz_A 139 HSYGGLGRSCLVAACLLLYLSDTISPEQAIDSLR 172 (212)
T ss_dssp ECSSSSSHHHHHHHHHHHHHCSSCCHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHHHHHhccCCCHHHHHHHHH
Confidence 99999999999998888764 999999987543
No 23
>1wrm_A Dual specificity phosphatase 22; DSP, JNK, hydrolase; HET: MES; 1.50A {Homo sapiens}
Probab=99.49 E-value=1.2e-13 Score=135.39 Aligned_cols=106 Identities=10% Similarity=0.100 Sum_probs=79.0
Q ss_pred ceEEEcCCCCHhhHHHHHHcCCcEEEEcCCCcccCcchhhhhHHhhhcCCcEEEEEecCCCCCCC-HHHHHHHHHHHhc-
Q 002281 267 VTFCRGGQVTEEGLKWLMEKGYKTIVDIRAERVKDNFYEAAIDDAILSGKVELIKIPVEVRTAPT-MEQVEKFASLVSN- 344 (943)
Q Consensus 267 ~~LYRSGqpT~eDLa~Lk~lGIKTVIDLRse~~ee~~~~a~e~e~~e~~GI~yIhIPV~d~~~Ps-~E~v~aFlelL~d- 344 (943)
+.||+|+++++.+++.|+++||++||||+.+. .+ ...|++|+++|+.|...++ .+.+..+.+++..
T Consensus 12 ~~lylG~~~~~~d~~~L~~~gI~~Vi~l~~~~--~~----------~~~~i~~~~ip~~D~~~~~l~~~~~~~~~fi~~~ 79 (165)
T 1wrm_A 12 PGLYIGNFKDARDAEQLSKNKVTHILSVHDSA--RP----------MLEGVKYLCIPAADSPSQNLTRHFKESIKFIHEC 79 (165)
T ss_dssp TTEEEECTTGGGCHHHHHHTTEEEEEECSTTC--CC----------CSTTCEEEECCCCSSTTSCCGGGHHHHHHHHHHH
T ss_pred CCEEECChhHhcCHHHHHHCCCcEEEEecCCC--CC----------CCCCCeEEEEECCCCCCccHHHHHHHHHHHHHHH
Confidence 36999999999999999999999999999864 11 1358999999998654332 1233333333321
Q ss_pred -CCCCcEEEeCccCCchHHHHHHHH-HHhcCCCHHHHHHHhh
Q 002281 345 -SSKKPLYLHSKEGVWRTYAMVSRW-RQYMARCASQISGQTI 384 (943)
Q Consensus 345 -s~~~PVLVHC~AGKDRTGALvaLl-r~~lGvs~edAiaDYL 384 (943)
..++||||||++|++|||++++.+ ....|++.++|++..-
T Consensus 80 ~~~~~~VlVHC~aG~~RSg~~~~ayLm~~~~~~~~~A~~~v~ 121 (165)
T 1wrm_A 80 RLRGESCLVHCLAGVSRSVTLVIAYIMTVTDFGWEDALHTVR 121 (165)
T ss_dssp HHTTCEEEEECSSSSSHHHHHHHHHHHHTSSCCHHHHHHHHH
T ss_pred HHCCCeEEEECCCCCChhHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 357899999999999999875444 4457999999996433
No 24
>1ohe_A CDC14B, CDC14B2 phosphatase; protein phosphatase, cell cycle, hydrolase; HET: SEP; 2.20A {Homo sapiens} SCOP: c.45.1.1 c.45.1.1 PDB: 1ohc_A 1ohd_A
Probab=99.47 E-value=8.5e-13 Score=145.58 Aligned_cols=104 Identities=14% Similarity=0.197 Sum_probs=85.8
Q ss_pred CHhhHHHHHHcCCcEEEEcCCCcccCcchhhhhHHhhhcCCcEEEEEecCCCCCCCHHHHHHHHHHHhcCCCCcEEEeCc
Q 002281 276 TEEGLKWLMEKGYKTIVDIRAERVKDNFYEAAIDDAILSGKVELIKIPVEVRTAPTMEQVEKFASLVSNSSKKPLYLHSK 355 (943)
Q Consensus 276 T~eDLa~Lk~lGIKTVIDLRse~~ee~~~~a~e~e~~e~~GI~yIhIPV~d~~~Ps~E~v~aFlelL~ds~~~PVLVHC~ 355 (943)
.+++++.|+++||++||||+.+. .. .+.+...|++|+++|+.|...|+.+.+..|++.+. ..++||||||+
T Consensus 207 ~~~~~~~L~~~GI~~VInL~~~~-y~-------~~~~~~~gi~~~~ipi~D~~~P~~~~~~~fi~~~~-~~~~~VLVHC~ 277 (348)
T 1ohe_A 207 PETYIQYFKNHNVTTIIRLNKRM-YD-------AKRFTDAGFDHHDLFFADGSTPTDAIVKEFLDICE-NAEGAIAVHSK 277 (348)
T ss_dssp THHHHHHHHHTTEEEEEECSCCS-SC-------THHHHTTTCEEEECCCCTTCCCCHHHHHHHHHHHH-SCSSEEEEECS
T ss_pred HHHHHHHHHHcCCCEEEECCCCc-CC-------hhhhhcCCcEEEEecCCCCCCCCHHHHHHHHHHHH-hCCCcEEEECC
Confidence 35678999999999999999653 11 12345679999999999888999999999999885 55789999999
Q ss_pred cCCchHHHHHHHHHHh-cCCCHHHHHHHhhcccc
Q 002281 356 EGVWRTYAMVSRWRQY-MARCASQISGQTITSND 388 (943)
Q Consensus 356 AGKDRTGALvaLlr~~-lGvs~edAiaDYLlsn~ 388 (943)
+|++|||+++++++.. .|++.++|++..-...+
T Consensus 278 aG~gRTGtvvaayLm~~~g~s~~eAl~~vr~~Rp 311 (348)
T 1ohe_A 278 AGLGRTGTLIACYIMKHYRMTAAETIAWVRICRP 311 (348)
T ss_dssp SSSHHHHHHHHHHHHHHHCCCHHHHHHHHHHHST
T ss_pred CCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhCC
Confidence 9999999999888776 79999999986654433
No 25
>3ezz_A Dual specificity protein phosphatase 4; alpha/beta, hydrolase, nucleus; 2.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1m3g_A
Probab=99.47 E-value=1.1e-13 Score=132.05 Aligned_cols=115 Identities=11% Similarity=0.143 Sum_probs=86.6
Q ss_pred ceEEEcCCCCHhhHHHHHHcCCcEEEEcCCCcccCcchhhhhHHhhhcCCcEEEEEecCCCCCCC-HHHHHHHHHHHhc-
Q 002281 267 VTFCRGGQVTEEGLKWLMEKGYKTIVDIRAERVKDNFYEAAIDDAILSGKVELIKIPVEVRTAPT-MEQVEKFASLVSN- 344 (943)
Q Consensus 267 ~~LYRSGqpT~eDLa~Lk~lGIKTVIDLRse~~ee~~~~a~e~e~~e~~GI~yIhIPV~d~~~Ps-~E~v~aFlelL~d- 344 (943)
+.||+|++++..+++.|+++||++||||+.+. ... ...+++|+++|+.|...++ .+.+.++.+++++
T Consensus 9 ~~lylg~~~~a~~~~~L~~~gI~~Vi~l~~~~--~~~---------~~~~~~~~~ip~~D~~~~~~~~~~~~~~~~i~~~ 77 (144)
T 3ezz_A 9 PFLYLGSAYHAARRDMLDALGITALLNVSSDC--PNH---------FEGHYQYKCIPVEDNHKADISSWFMEAIEYIDAV 77 (144)
T ss_dssp TTEEEEEHHHHTCHHHHHHTTCCEEEECSSSC--CCT---------TTTTSEEEECCCCSSSSCCTTTTHHHHHHHHHHH
T ss_pred CCEEECChhhcCCHHHHHHCCCeEEEEccCCC--Ccc---------CCCCceEEEEEcccCCCCChHHHHHHHHHHHHHH
Confidence 37999999999999999999999999999864 111 1257999999999876554 2344444444321
Q ss_pred -CCCCcEEEeCccCCchHHHHHHHHHHh-cCCCHHHHHHHhhcccccccc
Q 002281 345 -SSKKPLYLHSKEGVWRTYAMVSRWRQY-MARCASQISGQTITSNDVLLK 392 (943)
Q Consensus 345 -s~~~PVLVHC~AGKDRTGALvaLlr~~-lGvs~edAiaDYLlsn~~~~~ 392 (943)
..++||||||.+|++|||++++.|+.. .|++.++|++..-...+...-
T Consensus 78 ~~~~~~VlVHC~~G~~RS~~~~~aylm~~~~~~~~~A~~~v~~~Rp~~~p 127 (144)
T 3ezz_A 78 KDCRGRVLVHSQAGISRSATICLAYLMMKKRVRLEEAFEFVKQRRSIISP 127 (144)
T ss_dssp HHTTCCEEEEESSSSSHHHHHHHHHHHHHHTCCHHHHHHHHHTTCTTCCC
T ss_pred HhcCCeEEEECCCCCChhHHHHHHHHHHHcCCCHHHHHHHHHHHCCccCC
Confidence 346899999999999999887777654 799999999866555554333
No 26
>2oud_A Dual specificity protein phosphatase 10; A central five-stranded B-sheet, hydrolase; 2.80A {Homo sapiens}
Probab=99.44 E-value=7.6e-13 Score=131.51 Aligned_cols=113 Identities=12% Similarity=0.157 Sum_probs=85.0
Q ss_pred ceEEEcCCCCHhhHHHHHHcCCcEEEEcCCCcccCcchhhhhHHhhhcCCcEEEEEecCCCCCCC-HHHHHHHHHHHhc-
Q 002281 267 VTFCRGGQVTEEGLKWLMEKGYKTIVDIRAERVKDNFYEAAIDDAILSGKVELIKIPVEVRTAPT-MEQVEKFASLVSN- 344 (943)
Q Consensus 267 ~~LYRSGqpT~eDLa~Lk~lGIKTVIDLRse~~ee~~~~a~e~e~~e~~GI~yIhIPV~d~~~Ps-~E~v~aFlelL~d- 344 (943)
+.||+|++++..+++.|+++||++||||+.+. +.+ ..+..|++|+++|+.|...++ .+.+.++.+++..
T Consensus 13 p~LylG~~~~a~d~~~L~~~gI~~Vi~l~~e~---p~~------~~~~~~i~~~~ipi~D~~~~~l~~~~~~~~~~i~~~ 83 (177)
T 2oud_A 13 PFLFLGNEQDAQDLDTMQRLNIGYVINVTTHL---PLY------HYEKGLFNYKRLPATDSNKQNLRQYFEEAFEFIEEA 83 (177)
T ss_dssp TTEEEECTTTTTCHHHHHHTTEEEEEECCSSS---CCT------TTTTTCSEEEECCCCCCSSCCCHHHHHHHHHHHHHH
T ss_pred CCEEEcChhhhcCHHHHHHCCCcEEEEecCCC---Ccc------cccCCCceEEEEECCCCCcccHHHHHHHHHHHHHHH
Confidence 36999999999999999999999999999753 211 134579999999998754443 3445554454432
Q ss_pred -CCCCcEEEeCccCCchHHHHHHHHHH-hcCCCHHHHHHHhhcccc
Q 002281 345 -SSKKPLYLHSKEGVWRTYAMVSRWRQ-YMARCASQISGQTITSND 388 (943)
Q Consensus 345 -s~~~PVLVHC~AGKDRTGALvaLlr~-~lGvs~edAiaDYLlsn~ 388 (943)
..++||||||++|++|||+++++|+. ..|++.++|++..-...+
T Consensus 84 ~~~~~~VlVHC~aG~~RSg~~v~ayLm~~~~~~~~~A~~~v~~~Rp 129 (177)
T 2oud_A 84 HQCGKGLLIHCQAGVSRSATIVIAYLMKHTRMTMTDAYKFVKGKRP 129 (177)
T ss_dssp HHTTCEEEEECSSSSSHHHHHHHHHHHHTSCCCHHHHHHHHHHHCT
T ss_pred HhcCCcEEEEcCCCCCchHHHHHHHHHHHcCCCHHHHHHHHHHHCC
Confidence 25789999999999999988777655 479999999964443333
No 27
>2hcm_A Dual specificity protein phosphatase; structural genomics, PSI, protein structure INI NEW YORK SGX research center for structural genomics; 2.00A {Mus musculus}
Probab=99.43 E-value=3.6e-13 Score=131.57 Aligned_cols=107 Identities=12% Similarity=0.126 Sum_probs=81.1
Q ss_pred ceEEEcCCCCHhhHHHHHHcCCcEEEEcCCCcccCcchhhhhHHhhhcCCcEEEEEecCCCCCCC-HHHHHHHHHHHhc-
Q 002281 267 VTFCRGGQVTEEGLKWLMEKGYKTIVDIRAERVKDNFYEAAIDDAILSGKVELIKIPVEVRTAPT-MEQVEKFASLVSN- 344 (943)
Q Consensus 267 ~~LYRSGqpT~eDLa~Lk~lGIKTVIDLRse~~ee~~~~a~e~e~~e~~GI~yIhIPV~d~~~Ps-~E~v~aFlelL~d- 344 (943)
+.||.|+++++.+++.|+++||++||||+.+. +. . ...|++|+++|+.|...++ .+.+..+.+++..
T Consensus 17 ~~l~lg~~~~~~d~~~L~~~gI~~Vi~l~~~~-~~-~---------~~~~~~~~~ip~~D~~~~~~~~~~~~~~~~i~~~ 85 (164)
T 2hcm_A 17 PALFIGNARAAGATELLVRAGITLCVNVSRQQ-PG-P---------RAPGVAELRVPVFDDPAEDLLTHLEPTCAAMEAA 85 (164)
T ss_dssp TTEEEEEGGGGGCHHHHHHTTEEEEEECSSSC-CC-C---------CCTTCEEEECCCCSCTTSCCHHHHHHHHHHHHHH
T ss_pred CCEEECChhhhcCHHHHHHCCCeEEEEcCCCC-CC-C---------CCCCCEEEEEeCcCCCCchHHHHHHHHHHHHHHH
Confidence 36999999999999999999999999999875 21 1 2368999999998664433 3344444444422
Q ss_pred -CCCCcEEEeCccCCchHHHHHHHHHH-hcCCCHHHHHHHhh
Q 002281 345 -SSKKPLYLHSKEGVWRTYAMVSRWRQ-YMARCASQISGQTI 384 (943)
Q Consensus 345 -s~~~PVLVHC~AGKDRTGALvaLlr~-~lGvs~edAiaDYL 384 (943)
..++||||||++|++|||++++.|+. ..|++.++|++..-
T Consensus 86 ~~~~~~VlVHC~aG~~RSg~~~~ayLm~~~~~~~~~A~~~v~ 127 (164)
T 2hcm_A 86 VRDGGSCLVYCKNGRSRSAAVCTAYLMRHRGHSLDRAFQMVK 127 (164)
T ss_dssp HHTTCEEEEEESSSSHHHHHHHHHHHHHHSCCCHHHHHHHHH
T ss_pred HHcCCEEEEECCCCCchHHHHHHHHHHHHhCCCHHHHHHHHH
Confidence 24689999999999999977665544 47999999986443
No 28
>2hxp_A Dual specificity protein phosphatase 9; human phosphatase, structural genomics, PSI-2, protein structure initiative; 1.83A {Homo sapiens} PDB: 3lj8_A 1mkp_A
Probab=99.43 E-value=3.3e-13 Score=131.25 Aligned_cols=107 Identities=13% Similarity=0.198 Sum_probs=81.0
Q ss_pred ceEEEcCCCCHhhHHHHHHcCCcEEEEcCCCcccCcchhhhhHHhhhcC-CcEEEEEecCCCCCCCH-HHHHHHHHHHhc
Q 002281 267 VTFCRGGQVTEEGLKWLMEKGYKTIVDIRAERVKDNFYEAAIDDAILSG-KVELIKIPVEVRTAPTM-EQVEKFASLVSN 344 (943)
Q Consensus 267 ~~LYRSGqpT~eDLa~Lk~lGIKTVIDLRse~~ee~~~~a~e~e~~e~~-GI~yIhIPV~d~~~Ps~-E~v~aFlelL~d 344 (943)
+.||+|+++++++++.|+++||++||||+.+. .. . .+.. +++|+++|+.|...++. +.+.++.+++.+
T Consensus 11 ~~lylg~~~~~~d~~~L~~~gI~~Vi~l~~~~--~~-~-------~~~~~~i~~~~ipi~D~~~~~l~~~~~~~~~fi~~ 80 (155)
T 2hxp_A 11 PNLYLGSARDSANLESLAKLGIRYILNVTPNL--PN-F-------FEKNGDFHYKQIPISDHWSQNLSRFFPEAIEFIDE 80 (155)
T ss_dssp TTEEEECTTGGGCHHHHHHTTEEEEEECSSSC--CC-T-------TTTCTTCEEEECCCCGGGGGGHHHHHHHHHHHHHH
T ss_pred CCEEECChhhhcCHHHHHHCCCCEEEEeCCCC--cc-c-------ccCCCCeEEEEEECccCCCCCHHHHHHHHHHHHHH
Confidence 37999999999999999999999999999864 11 1 2233 59999999987655543 234444444432
Q ss_pred --CCCCcEEEeCccCCchHHHHHHHHHH-hcCCCHHHHHHHh
Q 002281 345 --SSKKPLYLHSKEGVWRTYAMVSRWRQ-YMARCASQISGQT 383 (943)
Q Consensus 345 --s~~~PVLVHC~AGKDRTGALvaLlr~-~lGvs~edAiaDY 383 (943)
..++||||||.+|++|||++++.|+. ..|++.++|++..
T Consensus 81 ~~~~~~~VlVHC~~G~~RS~~vv~ayLm~~~~~~~~~A~~~v 122 (155)
T 2hxp_A 81 ALSQNCGVLVHSLAGVSRSVTVTVAYLMQKLHLSLNDAYDLV 122 (155)
T ss_dssp HHHTTCEEEEECSSSSSHHHHHHHHHHHHHHTCCHHHHHHHH
T ss_pred HHHcCCcEEEECCCCCchhHHHHHHHHHHHcCCCHHHHHHHH
Confidence 25789999999999999987766654 4699999999833
No 29
>2nt2_A Protein phosphatase slingshot homolog 2; alpha/beta hydrolase; 2.10A {Homo sapiens}
Probab=99.42 E-value=4e-13 Score=128.48 Aligned_cols=104 Identities=23% Similarity=0.249 Sum_probs=78.0
Q ss_pred ceEEEcCCCCHhhHHHHHHcCCcEEEEcCCCcccCcchhhhhHHhhhcCCcEEEEEecCCCCCCC-HHHH---HHHHHHH
Q 002281 267 VTFCRGGQVTEEGLKWLMEKGYKTIVDIRAERVKDNFYEAAIDDAILSGKVELIKIPVEVRTAPT-MEQV---EKFASLV 342 (943)
Q Consensus 267 ~~LYRSGqpT~eDLa~Lk~lGIKTVIDLRse~~ee~~~~a~e~e~~e~~GI~yIhIPV~d~~~Ps-~E~v---~aFlelL 342 (943)
+.||+|+++++.+++.|+++||++||||+.+. ...+ ..|++|+++|+.|...++ .+.+ .+|++..
T Consensus 9 ~~lylg~~~~~~~~~~L~~~gi~~Vi~l~~~~--~~~~---------~~~~~~~~ipi~D~~~~~l~~~~~~~~~fi~~~ 77 (145)
T 2nt2_A 9 EHVFLGSEWNASNLEDLQNRGVRYILNVTREI--DNFF---------PGVFEYHNIRVYDEEATDLLAYWNDTYKFISKA 77 (145)
T ss_dssp TTEEEECHHHHTCHHHHHHTTEEEEEECCSSS--CCSC---------BTTBEEEECCCCSSTTCCCGGGHHHHHHHHHHH
T ss_pred CCEEECChhHhCCHHHHHHCCCCEEEEeCCCC--ccCC---------CCCcEEEEEEEeCCCCCcHHHHHHHHHHHHHHH
Confidence 46999999999999999999999999999864 1111 257999999998754433 1223 3344333
Q ss_pred hcCCCCcEEEeCccCCchHHHHHHHHHH-hcCCCHHHHHHH
Q 002281 343 SNSSKKPLYLHSKEGVWRTYAMVSRWRQ-YMARCASQISGQ 382 (943)
Q Consensus 343 ~ds~~~PVLVHC~AGKDRTGALvaLlr~-~lGvs~edAiaD 382 (943)
. ..++||||||.+|++|||++++.|+. ..|++.++|++.
T Consensus 78 ~-~~~~~VlVHC~~G~~RS~~~v~ayLm~~~~~~~~~A~~~ 117 (145)
T 2nt2_A 78 K-KHGSKCLVHSKMGVSRSASTVIAYAMKEYGWNLDRAYDY 117 (145)
T ss_dssp H-HTTCEEEEECSSSSSHHHHHHHHHHHHHHCCCHHHHHHH
T ss_pred H-HcCCeEEEECCCCCchHHHHHHHHHHHHhCCCHHHHHHH
Confidence 2 34689999999999999977655543 369999999953
No 30
>2r0b_A Serine/threonine/tyrosine-interacting protein; structural genomics, phosphatase, PSI-2, protein structure initiative; 1.60A {Homo sapiens}
Probab=99.42 E-value=5e-13 Score=128.61 Aligned_cols=110 Identities=14% Similarity=0.149 Sum_probs=77.7
Q ss_pred ceEEEcCCCCH--hhHHHHHHcCCcEEEEcCCCcccCcchhhhhHHhhhcCCcEEEEEecCCCCCCC----HHHHHHHHH
Q 002281 267 VTFCRGGQVTE--EGLKWLMEKGYKTIVDIRAERVKDNFYEAAIDDAILSGKVELIKIPVEVRTAPT----MEQVEKFAS 340 (943)
Q Consensus 267 ~~LYRSGqpT~--eDLa~Lk~lGIKTVIDLRse~~ee~~~~a~e~e~~e~~GI~yIhIPV~d~~~Ps----~E~v~aFle 340 (943)
+.||.|+++.. ++++.|+++||++|||||.+. +..... + ....|++|+++|+.+....+ .+.+.+|++
T Consensus 11 ~~lylG~~~~~~~~d~~~L~~~gI~~Vi~l~~~~-e~~~~~-~----~~~~~~~~~~ip~~d~~~~~l~~~~~~~~~~i~ 84 (154)
T 2r0b_A 11 PGLFLGPYSSAMKSKLPVLQKHGITHIICIRQNI-EANFIK-P----NFQQLFRYLVLDIADNPVENIIRFFPMTKEFID 84 (154)
T ss_dssp TTEEEECGGGGSGGGHHHHHHTTCCEEEEEECGG-GTTTSS-C----CCTTTSEEEEEECCSSTTSCCGGGHHHHHHHHH
T ss_pred CCeEECCHHHhhhccHHHHHHcCCeEEEEeCCcc-ccccCC-C----CCcCceeEEEEECCCCCcccHHHHHHHHHHHHH
Confidence 36999998654 789999999999999999875 211100 0 11368999999998654332 123334443
Q ss_pred HHhcCCCCcEEEeCccCCchHHHHHHHHHH-hcCCCHHHHHHHh
Q 002281 341 LVSNSSKKPLYLHSKEGVWRTYAMVSRWRQ-YMARCASQISGQT 383 (943)
Q Consensus 341 lL~ds~~~PVLVHC~AGKDRTGALvaLlr~-~lGvs~edAiaDY 383 (943)
... ..++||||||++|++|||++++.|+. ..|++.++|++..
T Consensus 85 ~~~-~~~~~vlvHC~aG~~RS~~~~~ayl~~~~~~~~~~a~~~v 127 (154)
T 2r0b_A 85 GSL-QMGGKVLVHGNAGISRSAAFVIAYIMETFGMKYRDAFAYV 127 (154)
T ss_dssp HHH-HTTCCEEEECSSSSSHHHHHHHHHHHHHHTCCHHHHHHHH
T ss_pred HHH-hcCCCEEEEcCCCCChHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 332 35689999999999999987766554 4799999998643
No 31
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=99.41 E-value=4.3e-14 Score=153.69 Aligned_cols=221 Identities=21% Similarity=0.210 Sum_probs=138.1
Q ss_pred CCEEEEEecCChhHHHHHHHHHHHHhcCCCeEEEEcCCh-hhhhhcCCCCccceeeeccCccccccCccEEEEEcCCchH
Q 002281 690 PRTVLVLKKPGPALMEEAKEVASFLYHQEKMNILVEPDV-HDIFARIPGFGFVQTFYLQDTSDLHERVDFVACLGGDGVI 768 (943)
Q Consensus 690 pk~VlIv~K~~~~~~~~a~~l~~~L~~~~g~~V~ve~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~DlVIvLGGDGTi 768 (943)
.++++||.++.....+.+.+++++|.+ .++++.+.... ....... . .+...+++|+||++|||||+
T Consensus 29 ~~~~~vi~Np~sg~~~~~~~i~~~l~~-~g~~~~~~~t~~~~~~~~~-----~-------~~~~~~~~d~vvv~GGDGTl 95 (332)
T 2bon_A 29 FPASLLILNGKSTDNLPLREAIMLLRE-EGMTIHVRVTWEKGDAARY-----V-------EEARKFGVATVIAGGGDGTI 95 (332)
T ss_dssp -CCEEEEECSSSTTCHHHHHHHHHHHT-TTCCEEEEECCSTTHHHHH-----H-------HHHHHHTCSEEEEEESHHHH
T ss_pred cceEEEEECCCCCCCchHHHHHHHHHH-cCCcEEEEEecCcchHHHH-----H-------HHHHhcCCCEEEEEccchHH
Confidence 466888877774322566789999864 56666553321 1111000 0 01123468999999999999
Q ss_pred HHHhhhcc----CCCCcEEEEeCCCCc-ccCCCC-chhHHHHHHHHHcCCCC-CCceeeeee-eEEE-------EEEEeC
Q 002281 769 LHASNLFR----GAVPPVISFNLGSLG-FLTSHP-FEDYRQDLRQVIYGNNT-LDGVYITLR-MRLC-------CEIFRN 833 (943)
Q Consensus 769 L~Aar~~~----~~~~PVLGIN~GsLG-FLt~~~-~ed~~~~L~~ll~G~~~-v~~~~i~~R-~rL~-------~~V~r~ 833 (943)
+.+++.+. ...+|+..|++|+.| |...+. +.++.++++.+++|++. +|-..+..| ..+. +.+.++
T Consensus 96 ~~v~~~l~~~~~~~~~plgiiP~Gt~N~fa~~l~i~~~~~~al~~i~~g~~~~iDlg~v~~r~~fl~~~~~G~da~v~~~ 175 (332)
T 2bon_A 96 NEVSTALIQCEGDDIPALGILPLGTANDFATSVGIPEALDKALKLAIAGDAIAIDMAQVNKQTCFINMATGGFGTRITTE 175 (332)
T ss_dssp HHHHHHHHHCCSSCCCEEEEEECSSSCHHHHHTTCCSSHHHHHHHHHHSEEEEEEEEEETTSCEESSEEEEEEEEEC---
T ss_pred HHHHHHHhhcccCCCCeEEEecCcCHHHHHHhcCCCCCHHHHHHHHHcCCeEEeeEEEECCceEEEEEEeECccHHHHHH
Confidence 99999887 678898889999999 665777 67899999999998742 110012223 2221 222211
Q ss_pred -Ceec---CCccccceeeEEEecCCCCeeEEEEEEECCEEeEEEeeCeEEeCCCcchHHHhhhcCCCCCCC-------CC
Q 002281 834 -GKAM---PGKVFDVLNEVVVDRGSNPYLSKIECYEHDRLITKVQGDGVIVATPTGSTAYSTAAGGSMVHP-------NV 902 (943)
Q Consensus 834 -G~~~---~~~~~~ALNEVvI~Rg~~~~l~~i~v~idg~~v~~~rgDGlIVSTPTGSTAYslSAGGPIV~P-------~v 902 (943)
.+.. .+...+++|-+ .+-...+..+++|.+||+. +++|+++|++..|+ | ++||+++.| .+
T Consensus 176 ~~~~~k~~~G~~~Y~~~~l--~~l~~~~~~~~~i~~dg~~---~~~~~~~v~v~N~~--~--~ggg~~i~P~a~~~DG~L 246 (332)
T 2bon_A 176 TPEKLKAALGSVSYIIHGL--MRMDTLQPDRCEIRGENFH---WQGDALVIGIGNGR--Q--AGGGQQLCPNALINDGLL 246 (332)
T ss_dssp -------CCHHHHHHHHHT--SCEEEEECEEEEEEETTEE---EEEEESEEEEESSS--C--BTTTBCSCTTCCTTSSCE
T ss_pred hhHHhHhcccHHHHHHHHH--HHHhhCCCeeEEEEECCEE---EEEEEEEEEEECCC--c--cCCCcccCCCCCCCCCeE
Confidence 1100 01112333321 1111123467888999986 46899999986555 4 789999999 67
Q ss_pred CeEEEEEccCCCCCC----------CCEEecCCCeEEEEEe
Q 002281 903 PCMLFTPICPHSLSF----------RPVILPDSARLELKVK 933 (943)
Q Consensus 903 ~~ivlTPIcPhsLs~----------RPlVLp~~s~I~Iki~ 933 (943)
++++++|+ ++.+.. +++.+....+|+|+..
T Consensus 247 dv~iv~~~-~~~l~~~~~~~~g~~~~~v~~~~~~~i~I~~~ 286 (332)
T 2bon_A 247 QLRIFTGD-EILPALVSTLKSDEDNPNIIEGASSWFDIQAP 286 (332)
T ss_dssp EEEEECCS-SCCHHHHHHHHTTCCCTTEEEEEESEEEEEEE
T ss_pred EEEEECCH-HHHHHHHHHHHcCCCCCcEEEEEeeEEEEEEC
Confidence 89999999 884333 6777777788888753
No 32
>3s4e_A Dual specificity protein phosphatase 19; PTP, protein tyrosine phosphatase, hydrolase; 1.26A {Homo sapiens}
Probab=99.40 E-value=4.7e-13 Score=128.07 Aligned_cols=111 Identities=13% Similarity=0.114 Sum_probs=83.6
Q ss_pred ceEEEcCCCCHhhHHHHHHcCCcEEEEcCCCcccCcchhhhhHHhhhcCCcEEEEEecCCCCCCC-HHHHHHHHHHHhc-
Q 002281 267 VTFCRGGQVTEEGLKWLMEKGYKTIVDIRAERVKDNFYEAAIDDAILSGKVELIKIPVEVRTAPT-MEQVEKFASLVSN- 344 (943)
Q Consensus 267 ~~LYRSGqpT~eDLa~Lk~lGIKTVIDLRse~~ee~~~~a~e~e~~e~~GI~yIhIPV~d~~~Ps-~E~v~aFlelL~d- 344 (943)
+.||+|++++..+++.|+++||++||||+.+. ...+ ..|++|+++|+.|....+ .+.+.+..+++.+
T Consensus 9 ~~LylG~~~~a~~~~~L~~~gI~~Vl~l~~~~--~~~~---------~~~~~~~~ipi~D~~~~~~~~~~~~~~~fi~~~ 77 (144)
T 3s4e_A 9 PWLLLGSQDAAHDLDTLKKNKVTHILNVAYGV--ENAF---------LSDFTYKSISILDLPETNILSYFPECFEFIEEA 77 (144)
T ss_dssp TTEEEECHHHHTCHHHHHHTTCCEEEECSSSC--CCCC---------TTTSEEEECCCCCCTTSCGGGGHHHHHHHHHHH
T ss_pred CCEEECChhHhCCHHHHHHcCCCEEEEccCCC--CCCC---------CCCCEEEEEeccCCCCCchHHHHHHHHHHHHHH
Confidence 46999999999999999999999999999854 2212 248999999998765443 2344444444421
Q ss_pred -CCCCcEEEeCccCCchHHHHHHHHHHh-cCCCHHHHHHHhhcccc
Q 002281 345 -SSKKPLYLHSKEGVWRTYAMVSRWRQY-MARCASQISGQTITSND 388 (943)
Q Consensus 345 -s~~~PVLVHC~AGKDRTGALvaLlr~~-lGvs~edAiaDYLlsn~ 388 (943)
..+++|||||.+|++|||++++.|+.. .|++.++|++.--...+
T Consensus 78 ~~~~~~VlVHC~~G~sRS~~~v~ayLm~~~~~~~~~A~~~v~~~Rp 123 (144)
T 3s4e_A 78 KRKDGVVLVHSNAGVSRAAAIVIGFLMNSEQTSFTSAFSLVKNARP 123 (144)
T ss_dssp HHTTCCEEEECSSSSSHHHHHHHHHHHHHHCCCHHHHHHHHHHHST
T ss_pred HHcCCeEEEEcCCCCchHHHHHHHHHHHHcCCCHHHHHHHHHHHCC
Confidence 346799999999999999887777654 79999999875444443
No 33
>3rz2_A Protein tyrosine phosphatase type IVA 1; tyrosine phosphatase, dual specific phosphatase, COMP with peptide, hydrolase; 2.80A {Rattus norvegicus} PDB: 1x24_A 1zcl_A
Probab=99.40 E-value=5.9e-13 Score=133.42 Aligned_cols=113 Identities=16% Similarity=0.124 Sum_probs=90.0
Q ss_pred eEEEcCCCC----HhhHHHHHHcCCcEEEEcCCCcccCcchhhhhHHhhhcCCcEEEEEecCCCCCCCHHHHHHHHHHHh
Q 002281 268 TFCRGGQVT----EEGLKWLMEKGYKTIVDIRAERVKDNFYEAAIDDAILSGKVELIKIPVEVRTAPTMEQVEKFASLVS 343 (943)
Q Consensus 268 ~LYRSGqpT----~eDLa~Lk~lGIKTVIDLRse~~ee~~~~a~e~e~~e~~GI~yIhIPV~d~~~Ps~E~v~aFlelL~ 343 (943)
++..+..|. +++++.|+++||++||||+.+. .. .+.+...|++|+++|+.+...++.+.+..|++.+.
T Consensus 38 r~I~tq~P~~~t~~~~~~~L~~~gi~~Iv~l~~~~-~~-------~~~~~~~~i~~~~~pi~d~~~~~~~~~~~~~~~i~ 109 (189)
T 3rz2_A 38 RFLITHNPTNATLNKFIEELKKYGVTTIVRVCEAT-YD-------TTLVEKEGIHVLDWPFDDGAPPSNQIVDDWLSLVK 109 (189)
T ss_dssp EEEEECCCCTTTHHHHHHHHHTTTEEEEEECSCCC-SC-------CHHHHHSSCEEEECCCCSSSCCCSHHHHHHHHHHH
T ss_pred eEEEeCCCCcccHHHHHHHHHHcCCcEEEEeCCCc-CC-------HHHHHHcCcEEEEecCCCCCCCCHHHHHHHHHHHH
Confidence 555555553 4678999999999999999865 11 12355689999999998888888888888888774
Q ss_pred ----cCCCCcEEEeCccCCchHHHHHHHHHHhcCCCHHHHHHHhhcccc
Q 002281 344 ----NSSKKPLYLHSKEGVWRTYAMVSRWRQYMARCASQISGQTITSND 388 (943)
Q Consensus 344 ----ds~~~PVLVHC~AGKDRTGALvaLlr~~lGvs~edAiaDYLlsn~ 388 (943)
...++||||||++|++|||+++++++...|++.++|++..-...+
T Consensus 110 ~~~~~~~~~~VlVHC~aG~gRSg~~va~~L~~~g~~~~~a~~~vr~~R~ 158 (189)
T 3rz2_A 110 IKFREEPGCCIAVHCVAGLGRAPVLVALALIEGGMKYEDAVQFIRQKRR 158 (189)
T ss_dssp HHHHHSTTCEEEEECSSSSTTHHHHHHHHHHTTTCCHHHHHHHHHTTSS
T ss_pred HHHHhCCCCcEEEECCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHCc
Confidence 356789999999999999999999988889999999876654433
No 34
>2wgp_A Dual specificity protein phosphatase 14; MKP6, DUSP14, hydrolase, dual specifici phosphatase; 1.88A {Homo sapiens}
Probab=99.40 E-value=4.5e-13 Score=135.03 Aligned_cols=106 Identities=14% Similarity=0.196 Sum_probs=80.0
Q ss_pred ceEEEcCCCCHhhHHHHHHcCCcEEEEcCCCcccCcchhhhhHHhhhcCCcEEEEEecCCCCCCCH-HHHHHHHHHHhc-
Q 002281 267 VTFCRGGQVTEEGLKWLMEKGYKTIVDIRAERVKDNFYEAAIDDAILSGKVELIKIPVEVRTAPTM-EQVEKFASLVSN- 344 (943)
Q Consensus 267 ~~LYRSGqpT~eDLa~Lk~lGIKTVIDLRse~~ee~~~~a~e~e~~e~~GI~yIhIPV~d~~~Ps~-E~v~aFlelL~d- 344 (943)
+.||+|+++++.+++.|+++||++||||+.+. +.. ...|++|+++|+.|...++. +.+..+.++++.
T Consensus 31 ~~LylG~~~~a~d~~~L~~~gI~~Vi~l~~~~-~~~----------~~~gi~y~~ipi~D~~~~~l~~~~~~~~~fi~~~ 99 (190)
T 2wgp_A 31 SSLFLGRGSVASNRHLLQARGITCIVNATIEI-PNF----------NWPQFEYVKVPLADMPHAPIGLYFDTVADKIHSV 99 (190)
T ss_dssp TTEEEECHHHHTCHHHHHHTTCCEEEECCSSS-CCC----------CCTTSEEEECCCCSSTTSCGGGGHHHHHHHHHHH
T ss_pred CcEEEcChhhhcCHHHHHHCCCcEEEEecCCC-CCC----------CCCCCEEEEEEcccCCCCCHHHHHHHHHHHHHHH
Confidence 36999999999999999999999999999864 211 12589999999987665543 333333333321
Q ss_pred -CCCCcEEEeCccCCchHHHHHHHHHH-hcCCCHHHHHHHh
Q 002281 345 -SSKKPLYLHSKEGVWRTYAMVSRWRQ-YMARCASQISGQT 383 (943)
Q Consensus 345 -s~~~PVLVHC~AGKDRTGALvaLlr~-~lGvs~edAiaDY 383 (943)
..++||||||.+|++|||++++.|+. ..|++.++|++..
T Consensus 100 ~~~~~~VlVHC~aG~~RSgtvv~ayLm~~~~~s~~~A~~~v 140 (190)
T 2wgp_A 100 SRKHGATLVHCAAGVSRSATLCIAYLMKFHNVCLLEAYNWV 140 (190)
T ss_dssp HHTTCCEEEECSSSSSHHHHHHHHHHHHHHCCCHHHHHHHH
T ss_pred HhcCCCEEEECCCCCCHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 24789999999999999977655543 4699999998643
No 35
>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*
Probab=99.39 E-value=2.5e-12 Score=125.96 Aligned_cols=119 Identities=13% Similarity=0.221 Sum_probs=96.2
Q ss_pred cCCCCceeeeccCCccccccCCCcceEEEcCCCCHhhHHHHHHcCCcEEEEcCCCcccCcchhhhhHHhhhcCCcEEEEE
Q 002281 243 TLFANWSPVYLSNSKDDIASKDSEVTFCRGGQVTEEGLKWLMEKGYKTIVDIRAERVKDNFYEAAIDDAILSGKVELIKI 322 (943)
Q Consensus 243 t~iaNwr~V~l~~~~d~~~~~~~e~~LYRSGqpT~eDLa~Lk~lGIKTVIDLRse~~ee~~~~a~e~e~~e~~GI~yIhI 322 (943)
..+.||+.|. ..||||+||++++...|++.|+++||++|.+. +....+ ...+.++..|++++++
T Consensus 10 ~~~~n~~~V~--------------~~l~~s~~p~~a~a~~La~~Ga~vvi~~r~~~-e~~~~~-~~~~~~~~~G~~~~~i 73 (157)
T 3gxh_A 10 QGIRALQQQA--------------PQLLSSGLPNEQQFSLLKQAGVDVVINLMPDS-SKDAHP-DEGKLVTQAGMDYVYI 73 (157)
T ss_dssp TTSTTCEEEE--------------TTEEEEBCCCHHHHHHHHHTTCCEEEECSCTT-STTSCT-THHHHHHHTTCEEEEC
T ss_pred hcCcChheec--------------CceeEcCCCCHHHHHHHHHcCCCEEEECCCcc-cccccc-cHHHHHHHcCCeEEEe
Confidence 3467888775 36999999999999999999999999999875 221111 1234567789999999
Q ss_pred ecCCCCCCCHHHHHHHHHHHhcCCCCcEEEeCccCCchHHHHHHHHHHhcCCCHHHH
Q 002281 323 PVEVRTAPTMEQVEKFASLVSNSSKKPLYLHSKEGVWRTYAMVSRWRQYMARCASQI 379 (943)
Q Consensus 323 PV~d~~~Ps~E~v~aFlelL~ds~~~PVLVHC~AGKDRTGALvaLlr~~lGvs~edA 379 (943)
|++ ...++.+++.++++.+.+..+++|||||++|. |+|.++++++...|++.++|
T Consensus 74 ~~D-v~~~~~~~v~~~~~~i~~~~G~dVLVnnAgg~-r~~~l~~~~~~~~G~~~~~A 128 (157)
T 3gxh_A 74 PVD-WQNPKVEDVEAFFAAMDQHKGKDVLVHCLANY-RASAFAYLYQLKQGQNPNMA 128 (157)
T ss_dssp CCC-TTSCCHHHHHHHHHHHHHTTTSCEEEECSBSH-HHHHHHHHHHHHTTCCCCHH
T ss_pred cCC-CCCCCHHHHHHHHHHHHhcCCCCEEEECCCCC-CHHHHHHHHHHHcCCCHHHH
Confidence 995 66778899999998886554559999999997 99988888887789999999
No 36
>2y96_A Dual specificity phosphatase DUPD1; hydrolase; 2.38A {Homo sapiens}
Probab=99.38 E-value=9.7e-13 Score=135.92 Aligned_cols=115 Identities=10% Similarity=0.082 Sum_probs=84.8
Q ss_pred eEEEcCCCCHhhHHHHHHcCCcEEEEcCCCcccCcchhhhhHHhhhcCCcEEEEEecCCCCCCCH-HHHHHHHHHHh---
Q 002281 268 TFCRGGQVTEEGLKWLMEKGYKTIVDIRAERVKDNFYEAAIDDAILSGKVELIKIPVEVRTAPTM-EQVEKFASLVS--- 343 (943)
Q Consensus 268 ~LYRSGqpT~eDLa~Lk~lGIKTVIDLRse~~ee~~~~a~e~e~~e~~GI~yIhIPV~d~~~Ps~-E~v~aFlelL~--- 343 (943)
.||+|++++..+++.|+++||++||||+.+..... .........|++|+++|+.|...++. +.+..+++++.
T Consensus 60 ~LylG~~~~a~d~~~L~~~gIt~VInl~~~~~~~~----~~~~~~~~~~i~y~~ipi~D~~~~~l~~~~~~~~~fI~~~l 135 (219)
T 2y96_A 60 KLYIGDEATALDRYRLQKAGFTHVLNAAHGRWNVD----TGPDYYRDMDIQYHGVEADDLPTFDLSVFFYPAAAFIDRAL 135 (219)
T ss_dssp TEEEECHHHHHCHHHHHHTTCCEEEETTBSTTSBC----CHHHHTTTSCCEEEECCCCSSTTSCGGGGHHHHHHHHHHHH
T ss_pred CEEECChhHhCCHHHHHHCCCeEEEECCCCccccc----cchhhhcccCcEEEEEECCCCCchhHHHHHHHHHHHHHHHH
Confidence 69999999999999999999999999997641111 11234557899999999987544432 23333333332
Q ss_pred cCCCCcEEEeCccCCchHHHHHHHHHH-hcCCCHHHHHHHhhcc
Q 002281 344 NSSKKPLYLHSKEGVWRTYAMVSRWRQ-YMARCASQISGQTITS 386 (943)
Q Consensus 344 ds~~~PVLVHC~AGKDRTGALvaLlr~-~lGvs~edAiaDYLls 386 (943)
...++||||||.+|++|||+++++|+. ..|++.++|++..-..
T Consensus 136 ~~~~~~VLVHC~aG~sRS~tvv~aYLm~~~~~s~~eAl~~vr~~ 179 (219)
T 2y96_A 136 SDDHSKILVHCVMGRSRSATLVLAYLMIHKDMTLVDAIQQVAKN 179 (219)
T ss_dssp TSTTCCEEEECSSSSSHHHHHHHHHHHHHSCCCHHHHHHHHHTT
T ss_pred HccCCeEEEECCCCCCHHHHHHHHHHHHHcCCCHHHHHHHHHHh
Confidence 245789999999999999988777654 4799999999855433
No 37
>2esb_A Dual specificity protein phosphatase 18; alpha/beta structure, hydrolase; HET: EPE; 2.00A {Homo sapiens}
Probab=99.37 E-value=3.6e-12 Score=128.11 Aligned_cols=106 Identities=15% Similarity=0.210 Sum_probs=79.5
Q ss_pred ceEEEcCCCCHhhHHHHHHcCCcEEEEcCCCcccCcchhhhhHHhhhcCCcEEEEEecCCCCCCC-HHHHHHHHHHHhc-
Q 002281 267 VTFCRGGQVTEEGLKWLMEKGYKTIVDIRAERVKDNFYEAAIDDAILSGKVELIKIPVEVRTAPT-MEQVEKFASLVSN- 344 (943)
Q Consensus 267 ~~LYRSGqpT~eDLa~Lk~lGIKTVIDLRse~~ee~~~~a~e~e~~e~~GI~yIhIPV~d~~~Ps-~E~v~aFlelL~d- 344 (943)
+.||.|+++...+++.|+++||++|||++.+. +.. ...|++|+++|+.|..... .+.+....+++++
T Consensus 25 ~~LylG~~~~a~d~~~L~~~gIt~Vi~l~~~~-~~~----------~~~~i~~~~ipi~D~~~~~~~~~~~~~~~fI~~~ 93 (188)
T 2esb_A 25 KSLYISNGVAANNKLMLSSNQITMVINVSVEV-VNT----------LYEDIQYMQVPVADSPNSRLCDFFDPIADHIHSV 93 (188)
T ss_dssp TTEEEECTTGGGCHHHHHHTTCCEEEECCSSC-CCC----------CCTTCEEEECCCCSCTTSCGGGGHHHHHHHHHHH
T ss_pred CCEEEcCchHhcCHHHHHHCCCcEEEEecCCC-CCc----------CCCCCEEEEEeCcCCCCccHHHHHHHHHHHHHHH
Confidence 37999999999999999999999999999864 111 1258999999998654432 2334433344322
Q ss_pred -CCCCcEEEeCccCCchHHHHHHHHHH-hcCCCHHHHHHHh
Q 002281 345 -SSKKPLYLHSKEGVWRTYAMVSRWRQ-YMARCASQISGQT 383 (943)
Q Consensus 345 -s~~~PVLVHC~AGKDRTGALvaLlr~-~lGvs~edAiaDY 383 (943)
..++||||||.+|++|||++++.|+. ..|++.++|++..
T Consensus 94 ~~~~~~VLVHC~aG~sRS~~vv~ayLm~~~~~s~~~A~~~v 134 (188)
T 2esb_A 94 EMKQGRTLLHCAAGVSRSAALCLAYLMKYHAMSLLDAHTWT 134 (188)
T ss_dssp HHTTCCEEEECSSSSSHHHHHHHHHHHHHSCCCHHHHHHHH
T ss_pred HHcCCEEEEECCCCCchHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 35789999999999999977665543 4799999998543
No 38
>2pq5_A Dual specificity protein phosphatase 13; hydrolase, dual specificity phosphatase, DUSP13, testis and skeletal muscle specific DSP; 2.30A {Homo sapiens} PDB: 2gwo_A
Probab=99.35 E-value=3.3e-12 Score=130.22 Aligned_cols=112 Identities=13% Similarity=0.097 Sum_probs=81.3
Q ss_pred eEEEcCCCCHhhHHHHHHcCCcEEEEcCCCcccCcchhhhhHHhhhcCCcEEEEEecCCCCCCCH-H---HHHHHHHHHh
Q 002281 268 TFCRGGQVTEEGLKWLMEKGYKTIVDIRAERVKDNFYEAAIDDAILSGKVELIKIPVEVRTAPTM-E---QVEKFASLVS 343 (943)
Q Consensus 268 ~LYRSGqpT~eDLa~Lk~lGIKTVIDLRse~~ee~~~~a~e~e~~e~~GI~yIhIPV~d~~~Ps~-E---~v~aFlelL~ 343 (943)
.||+|+++++.+++.|+++||++||||+.+. ..... .....+..|++|+++|+.|....+. . ...+|++-..
T Consensus 52 ~LylG~~~~a~d~~~L~~~gIt~Vinl~~~~-~~~~~---~~~~~~~~~i~y~~ipi~D~p~~dl~~~f~~~~~fI~~~l 127 (205)
T 2pq5_A 52 SLFLGDAYAARDKSKLIQLGITHVVNAAAGK-FQVDT---GAKFYRGMSLEYYGIEADDNPFFDLSVYFLPVARYIRAAL 127 (205)
T ss_dssp TEEEECHHHHHCHHHHHHHTCCEEEETBCST-TSCCC---HHHHTTTSSCEEEECBCCCCTTSCGGGGHHHHHHHHHHHH
T ss_pred CEEECChhHhcCHHHHHHcCCeEEEEeCCCc-ccCCc---chhhhccCCceEEeeecCCCCcchHHHHHHHHHHHHHHHH
Confidence 6999999999999999999999999999864 11111 1234456799999999986432221 1 2223333222
Q ss_pred cCCCCcEEEeCccCCchHHHHHHHHHH-hcCCCHHHHHHHh
Q 002281 344 NSSKKPLYLHSKEGVWRTYAMVSRWRQ-YMARCASQISGQT 383 (943)
Q Consensus 344 ds~~~PVLVHC~AGKDRTGALvaLlr~-~lGvs~edAiaDY 383 (943)
...++||||||.+|++|||+++++|+. ..|++.++|++..
T Consensus 128 ~~~~~~VLVHC~aG~sRS~tvv~aYLm~~~~~s~~~A~~~v 168 (205)
T 2pq5_A 128 SVPQGRVLVHCAMGVSRSATLVLAFLMIYENMTLVEAIQTV 168 (205)
T ss_dssp TSTTCCEEEECSSSSSHHHHHHHHHHHHHSCCCHHHHHHHH
T ss_pred hcCCCeEEEECCCCCcHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 235789999999999999988777654 4799999999743
No 39
>1yn9_A BVP, polynucleotide 5'-phosphatase; RNA triphosphatase, cysteine phosphatase, P-loop, hydrolase; HET: PO4; 1.50A {Autographa californicanucleopolyhedrovirus}
Probab=99.34 E-value=1.8e-12 Score=127.16 Aligned_cols=96 Identities=20% Similarity=0.264 Sum_probs=76.2
Q ss_pred HcCCcEEEEcCCCcccCcchhhhhHHhhhcCCcEEEEEecCCCCCCCHHHHHHHHHHHh----cCCCCcEEEeCccCCch
Q 002281 285 EKGYKTIVDIRAERVKDNFYEAAIDDAILSGKVELIKIPVEVRTAPTMEQVEKFASLVS----NSSKKPLYLHSKEGVWR 360 (943)
Q Consensus 285 ~lGIKTVIDLRse~~ee~~~~a~e~e~~e~~GI~yIhIPV~d~~~Ps~E~v~aFlelL~----ds~~~PVLVHC~AGKDR 360 (943)
..||++||||+.+. ..|. .+.+...|++|+++|+.+...|+.+.+..|.+.+. ...++||+|||++|++|
T Consensus 53 ~~gi~~Vi~l~~~~---~~~~---~~~~~~~gi~~~~~~~~d~~~p~~~~~~~~~~~~~~~~~~~~~~~vlVHC~aG~~R 126 (169)
T 1yn9_A 53 NPSIGAIIDLTNTS---KYYD---GVHFLRAGLLYKKIQVPGQTLPPESIVQEFIDTVKEFTEKCPGMLVGVHCTHGINR 126 (169)
T ss_dssp CTTEEEEEECCSCS---CSCC---THHHHHTTCEEEECCCCSSSCCCHHHHHHHHHHHHHHHHHSTTSEEEEECSSSSHH
T ss_pred CCCcCEEEEcCCCC---CCCC---HHHHHhcCCEEEEEeCCCCCCCCHHHHHHHHHHHHHHHHhCCCCcEEEECCCCCCh
Confidence 58999999998754 1221 13356689999999999888898888877776653 23578999999999999
Q ss_pred HHHHHHHHHHh-cCCCHHHHHHHhhcc
Q 002281 361 TYAMVSRWRQY-MARCASQISGQTITS 386 (943)
Q Consensus 361 TGALvaLlr~~-lGvs~edAiaDYLls 386 (943)
||+++++++.. .|++.++|++.+-..
T Consensus 127 Tg~~va~~L~~~~~~~~~~a~~~~r~~ 153 (169)
T 1yn9_A 127 TGYMVCRYLMHTLGIAPQEAIDRFEKA 153 (169)
T ss_dssp HHHHHHHHHHHHHCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHH
Confidence 99999888876 899999999866533
No 40
>3emu_A Leucine rich repeat and phosphatase domain containing protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.30A {Entamoeba histolytica}
Probab=99.34 E-value=2.6e-12 Score=126.21 Aligned_cols=113 Identities=9% Similarity=0.183 Sum_probs=83.0
Q ss_pred ceEEEcCCCCHhhHHHHHHcCCcEEEEcCCCcccCcchhhhhHHhhhcCCcEEEEEecCCCCCCCH-HHHHHHHHHHhc-
Q 002281 267 VTFCRGGQVTEEGLKWLMEKGYKTIVDIRAERVKDNFYEAAIDDAILSGKVELIKIPVEVRTAPTM-EQVEKFASLVSN- 344 (943)
Q Consensus 267 ~~LYRSGqpT~eDLa~Lk~lGIKTVIDLRse~~ee~~~~a~e~e~~e~~GI~yIhIPV~d~~~Ps~-E~v~aFlelL~d- 344 (943)
+.||.|+++...+.+.|+++||++|||++.+. .+. ...|++|+++|+.|....+. +.+.+..+++++
T Consensus 15 ~~LylG~~~~a~~~~~L~~~gIt~Vlnl~~~~--~~~---------~~~~~~~~~ipi~D~~~~~l~~~~~~~~~fI~~~ 83 (161)
T 3emu_A 15 QYIHLGSFLNAHNVDYIHNNNISSILLVGIEV--PSL---------FKDQCDILRLDIVSEEGHQLYDSIPNAIKFIIRS 83 (161)
T ss_dssp TTEEEEETTGGGCHHHHHHTTEEEEEEEC------------------CTTSEEEEECCCCSSTTHHHHHHHHHHHHHHHH
T ss_pred CCEEECChHHhhCHHHHHHCCCCEEEEeCCCC--ccc---------cCCCCEEEEEeCcCCCCCcHHHHHHHHHHHHHHH
Confidence 36999999999999999999999999999753 111 13489999999987654443 235555555543
Q ss_pred -CCCCcEEEeCccCCchHHHHHHHHHH-hcCCCHHHHHHHhhcccccc
Q 002281 345 -SSKKPLYLHSKEGVWRTYAMVSRWRQ-YMARCASQISGQTITSNDVL 390 (943)
Q Consensus 345 -s~~~PVLVHC~AGKDRTGALvaLlr~-~lGvs~edAiaDYLlsn~~~ 390 (943)
..+++|||||.+|++||+++++.|+. ..|++.++|++.--...+..
T Consensus 84 ~~~~~~VlVHC~~G~sRS~~vv~ayLm~~~~~s~~~A~~~v~~~Rp~i 131 (161)
T 3emu_A 84 IQRKEGVLIISGTGVNKAPAIVIAFLMYYQRLSFINAFNKVQGLYPLI 131 (161)
T ss_dssp HHTTCEEEEEESSSSSHHHHHHHHHHHHHTTCCHHHHHHHHHHHCTTC
T ss_pred HhcCCeEEEEcCCCCcHHHHHHHHHHHHHhCCCHHHHHHHHHHHCCCc
Confidence 35689999999999999977766654 47999999988654444433
No 41
>2g6z_A Dual specificity protein phosphatase 5; alpha/beta, hydrolase; 2.70A {Homo sapiens}
Probab=99.29 E-value=3.9e-12 Score=131.38 Aligned_cols=107 Identities=9% Similarity=0.111 Sum_probs=81.3
Q ss_pred ceEEEcCCCCHhhHHHHHHcCCcEEEEcCCCcccCcchhhhhHHhhhcCCcEEEEEecCCCCCCCH-HHHHHHHHHHhc-
Q 002281 267 VTFCRGGQVTEEGLKWLMEKGYKTIVDIRAERVKDNFYEAAIDDAILSGKVELIKIPVEVRTAPTM-EQVEKFASLVSN- 344 (943)
Q Consensus 267 ~~LYRSGqpT~eDLa~Lk~lGIKTVIDLRse~~ee~~~~a~e~e~~e~~GI~yIhIPV~d~~~Ps~-E~v~aFlelL~d- 344 (943)
+.||+|+++...++++|+++||++||||+.+. . . + ...|++|+++|+.|...++. +.+.++.+++++
T Consensus 11 p~LylG~~~~a~d~~~L~~~GIt~VInl~~e~-~-~-~--------~~~gi~y~~ipi~D~~~~~l~~~~~~~~~fI~~~ 79 (211)
T 2g6z_A 11 PFLYLGSAYHASKCEFLANLHITALLNVSRRT-S-E-A--------CMTHLHYKWIPVEDSHTADISSHFQEAIDFIDCV 79 (211)
T ss_dssp TTEEEEEHHHHTCHHHHHHHTCCEEEECSSCC-C-C-T--------TCTTSEEEECCCCSSTTSCCGGGHHHHHHHHHHH
T ss_pred CCEEEcCCccccCHHHHHHCCCCEEEEcCCCC-c-c-c--------cccCCEEEEeeCCCCCCCCHHHHHHHHHHHHHHH
Confidence 37999999999999999999999999999864 1 1 1 13689999999987665542 344444444432
Q ss_pred -CCCCcEEEeCccCCchHHHHHHHHHH-hcCCCHHHHHHHhh
Q 002281 345 -SSKKPLYLHSKEGVWRTYAMVSRWRQ-YMARCASQISGQTI 384 (943)
Q Consensus 345 -s~~~PVLVHC~AGKDRTGALvaLlr~-~lGvs~edAiaDYL 384 (943)
..+++|||||.+|++|||++++.|+. ..|++.++|++..-
T Consensus 80 ~~~~~~VLVHC~aG~sRSgtvv~AYLm~~~g~s~~eAl~~vr 121 (211)
T 2g6z_A 80 REKGGKVLVHSEAGISRSPTICMAYLMKTKQFRLKEAFDYIK 121 (211)
T ss_dssp HHTTCCEEEEESSSSSHHHHHHHHHHHHHHCCCHHHHHHHHH
T ss_pred HhcCCeEEEECCCCCCcHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 35789999999999999977666554 36999999986443
No 42
>2q05_A Late protein H1, dual specificity protein phosphatase; structural genomics, APC7320, P protein structure initiative; HET: MSE; 2.57A {Vaccinia virus WR}
Probab=99.29 E-value=7.8e-12 Score=126.49 Aligned_cols=108 Identities=15% Similarity=0.200 Sum_probs=79.9
Q ss_pred ceEEEcCCCCHhhHHHHHHcCC--cEEEEcCCCcccCcchhhhhHHhhhcCCcEEEEEecCCCCCCC-H---HHHHHHHH
Q 002281 267 VTFCRGGQVTEEGLKWLMEKGY--KTIVDIRAERVKDNFYEAAIDDAILSGKVELIKIPVEVRTAPT-M---EQVEKFAS 340 (943)
Q Consensus 267 ~~LYRSGqpT~eDLa~Lk~lGI--KTVIDLRse~~ee~~~~a~e~e~~e~~GI~yIhIPV~d~~~Ps-~---E~v~aFle 340 (943)
+.||+|+++...+. +++|| ++|||||.+. +. ....|++|+++|+.+...+. . +.+.+|++
T Consensus 54 ~~Lylg~~~~~~~~---~~~gI~~~~Vi~l~~~~-~~----------~~~~~~~~~~~p~~d~~~~~l~~~~~~~~~~i~ 119 (195)
T 2q05_A 54 NNVYLGNYKNAMDA---PSSEVKFKYVLNLTMDK-YT----------LPNSNINIIHIPLVDDTTTDISKYFDDVTAFLS 119 (195)
T ss_dssp SSEEEECHHHHHHS---TTSSSCCSEEEECSSSC-CC----------CTTCCCEEEECCCCCSSSCCCGGGHHHHHHHHH
T ss_pred CCEEECchhhhhCH---HhCCCCCCEEEEECCCC-CC----------cccCCcEEEEEEcCCCCcccHHHHHHHHHHHHH
Confidence 36999999987766 77899 9999999875 11 12468999999998654443 2 34444444
Q ss_pred HHhcCCCCcEEEeCccCCchHHHHHHHHHHh-cCCC-----HHHHHHHhhccccc
Q 002281 341 LVSNSSKKPLYLHSKEGVWRTYAMVSRWRQY-MARC-----ASQISGQTITSNDV 389 (943)
Q Consensus 341 lL~ds~~~PVLVHC~AGKDRTGALvaLlr~~-lGvs-----~edAiaDYLlsn~~ 389 (943)
.+. ..++||||||++|++|||+++++++.. .|++ .++|++..-...+.
T Consensus 120 ~~~-~~~~~VlVHC~aG~~RSg~~v~~yL~~~~~~~~~~v~~~~A~~~vr~~R~~ 173 (195)
T 2q05_A 120 KCD-QRNEPVLVHCAAGVNRSGAMILAYLMSKNKESLPMLYFLYVYHSMRDLRGA 173 (195)
T ss_dssp HHH-HTTCCEEEECSSSSSHHHHHHHHHHHHHCCSSCHHHHHHHHHHHHHHHHSC
T ss_pred HHH-HcCCcEEEEcCCCCChHHHHHHHHHHHHhCCCccccCHHHHHHHHHHHCCC
Confidence 442 347899999999999999998888765 6899 88888765544443
No 43
>3nme_A Ptpkis1 protein, SEX4 glucan phosphatase; dual specificity phosphatase, carbohydrate BIND hydrolase; 2.40A {Arabidopsis thaliana}
Probab=99.24 E-value=1.1e-11 Score=133.71 Aligned_cols=122 Identities=14% Similarity=0.137 Sum_probs=87.0
Q ss_pred ceEEEcCCC-CHhhHHHHHHcCCcEEEEcCCCcccCcc---hhhhhHHhhhcC-CcEEEEEecCCCCCCCH-HHHHHHHH
Q 002281 267 VTFCRGGQV-TEEGLKWLMEKGYKTIVDIRAERVKDNF---YEAAIDDAILSG-KVELIKIPVEVRTAPTM-EQVEKFAS 340 (943)
Q Consensus 267 ~~LYRSGqp-T~eDLa~Lk~lGIKTVIDLRse~~ee~~---~~a~e~e~~e~~-GI~yIhIPV~d~~~Ps~-E~v~aFle 340 (943)
+.||.|+++ ++++++.|+++||++||||+.+. +... ......+.++.. |++|+|+|+.|...++. +.+.+.++
T Consensus 18 p~LylGs~~~~~~d~~~L~~~GIt~Vlnl~~~~-e~~~~g~~~~~~~~~~~~~~gi~~~~ipi~D~~~~~l~~~~~~~~~ 96 (294)
T 3nme_A 18 PDLIVGSCLQTPEDVDKLRKIGVKTIFCLQQDP-DLEYFGVDISSIQAYAKKYSDIQHIRCEIRDFDAFDLRMRLPAVVG 96 (294)
T ss_dssp TTEEEECCCCSTHHHHHHHHTTEEEEEECCCHH-HHHHTTCCHHHHHHHHHTCTTCEEEECCCCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEcCCCCHHHHHHHHHCCCCEEEECCCCc-chhhccCChhhhhhhhhhcCCcEEEEEeCCCCCCCCHHHHHHHHHH
Confidence 368899876 78999999999999999999864 1111 011122344554 79999999997765554 34444444
Q ss_pred HHhc---CCCCcEEEeCccCCchHHHHHHHHHHh-cCCCHHHHHHHhhccccc
Q 002281 341 LVSN---SSKKPLYLHSKEGVWRTYAMVSRWRQY-MARCASQISGQTITSNDV 389 (943)
Q Consensus 341 lL~d---s~~~PVLVHC~AGKDRTGALvaLlr~~-lGvs~edAiaDYLlsn~~ 389 (943)
++.+ ..+++|||||.+|++|||++++.|+.. .|++.++|++..-...+.
T Consensus 97 ~I~~~l~~~g~~VLVHC~aG~sRS~tvv~ayLm~~~g~s~~~A~~~v~~~Rp~ 149 (294)
T 3nme_A 97 TLYKAVKRNGGVTYVHSTAGMGRAPAVALTYMFWVQGYKLMEAHKLLMSKRSC 149 (294)
T ss_dssp HHHHHHHHHCSEEEEECSSSSSHHHHHHHHHHHHTSCCCHHHHHHHHHHHCCC
T ss_pred HHHHHHHhCCCEEEEECCCCCchhHHHHHHHHHHHhCCCHHHHHHHHHHhCCC
Confidence 4432 246799999999999999888777665 599999998865444444
No 44
>2c46_A MRNA capping enzyme; phosphatase, transferase, hydrolase, mRNA processing, multifunctional enzyme, nucleotidyltransferase; 1.6A {Homo sapiens} PDB: 1i9s_A 1i9t_A
Probab=99.16 E-value=9.1e-11 Score=123.23 Aligned_cols=106 Identities=19% Similarity=0.262 Sum_probs=83.1
Q ss_pred CCHhhH-HHHHHc--CCcEEEEcCCCcccCcchhhhhHHhhhcCCcEEEEEecCCC-CCCCHHHHHHHHHHHhcC----C
Q 002281 275 VTEEGL-KWLMEK--GYKTIVDIRAERVKDNFYEAAIDDAILSGKVELIKIPVEVR-TAPTMEQVEKFASLVSNS----S 346 (943)
Q Consensus 275 pT~eDL-a~Lk~l--GIKTVIDLRse~~ee~~~~a~e~e~~e~~GI~yIhIPV~d~-~~Ps~E~v~aFlelL~ds----~ 346 (943)
.+++++ +.|+.. ||++||||+.+. ..|. .+.++..|++|+++|+.|. ..|+.+.+..|++++.+. .
T Consensus 67 ~~~~~v~~~l~~~~~~i~~VInL~~e~---~~y~---~~~~~~~gi~y~~~p~~D~~~~P~~~~l~~~~~~i~~~~~~~~ 140 (241)
T 2c46_A 67 FHPSMLSNYLKSLKVKMGLLVDLTNTS---RFYD---RNDIEKEGIKYIKLQCKGHGECPTTENTETFIRLCERFNERNP 140 (241)
T ss_dssp CCHHHHHHHHHHHTCEEEEEEECSSCS---CSSC---THHHHTTTCEEEECCCCCTTCCCCHHHHHHHHHHHTTC-----
T ss_pred CCHHHHHHHHHHhCCCcceeeeccCCC---CCCC---HHHHHHCCCEEEEEecCCCCCCCChHHHHHHHHHHHHHHHhCC
Confidence 456665 667766 999999999763 1231 2346678999999999874 689999999999988532 3
Q ss_pred CCcEEEeCccCCchHHHHHHHHHHh-cCCCHHHHHHHhhcc
Q 002281 347 KKPLYLHSKEGVWRTYAMVSRWRQY-MARCASQISGQTITS 386 (943)
Q Consensus 347 ~~PVLVHC~AGKDRTGALvaLlr~~-lGvs~edAiaDYLls 386 (943)
++||+|||++|++|||+++++|+.. .|++.++|++.+-..
T Consensus 141 ~~~VlVHC~aG~gRTGt~ia~yLm~~~~~s~~eAi~~vr~~ 181 (241)
T 2c46_A 141 PELIGVHCTHGFNRTGFLICAFLVEKMDWSIEAAVATFAQA 181 (241)
T ss_dssp CEEEEEECSSSSHHHHHHHHHHHHHTTCCCHHHHHHHHHHH
T ss_pred CCeEEEECCCCCCHHHHHHHHHHHHHhCCCHHHHHHHHHHH
Confidence 5799999999999999999998766 799999998876533
No 45
>3cm3_A Late protein H1, dual specificity protein phosphatase; dual-specificity phosphatase, VH1, hydrolase; 1.32A {Vaccinia virus} PDB: 2rf6_A 2p4d_A
Probab=99.14 E-value=6.9e-11 Score=117.01 Aligned_cols=106 Identities=16% Similarity=0.209 Sum_probs=77.5
Q ss_pred ceEEEcCCCCHhhHHHHHHcCC--cEEEEcCCCcccCcchhhhhHHhhhcCCcEEEEEecCCCCCCC----HHHHHHHHH
Q 002281 267 VTFCRGGQVTEEGLKWLMEKGY--KTIVDIRAERVKDNFYEAAIDDAILSGKVELIKIPVEVRTAPT----MEQVEKFAS 340 (943)
Q Consensus 267 ~~LYRSGqpT~eDLa~Lk~lGI--KTVIDLRse~~ee~~~~a~e~e~~e~~GI~yIhIPV~d~~~Ps----~E~v~aFle 340 (943)
+.||+|+++...+. +++|| ++||||+.+. .. + ...|++|+++|+.+...++ .+.+..|++
T Consensus 37 ~~lylg~~~~a~~~---~~~gI~~~~Ii~l~~~~--~~-~--------~~~~~~~~~~p~~d~~~~~l~~~~~~~~~~i~ 102 (176)
T 3cm3_A 37 NNVYLGNYKNAMDA---PSSEVKFKYVLNLTMDK--YT-L--------PNSNINIIHIPLVDDTTTDISKYFDDVTAFLS 102 (176)
T ss_dssp SSEEEECHHHHHTG---GGSSSCCSEEEECSSSC--CC-C--------TTSCCEEEECCCCCSSSCCCGGGHHHHHHHHH
T ss_pred CCEEEcCHHHhhCH---HHcCCCCCEEEEecCCC--CC-c--------CCCCCEEEEEECCCCCcccHHHHHHHHHHHHH
Confidence 36999999887776 77899 9999999864 11 1 2368999999998765544 233444444
Q ss_pred HHhcCCCCcEEEeCccCCchHHHHHHHHHHh-cCCC-----HHHHHHHhhccc
Q 002281 341 LVSNSSKKPLYLHSKEGVWRTYAMVSRWRQY-MARC-----ASQISGQTITSN 387 (943)
Q Consensus 341 lL~ds~~~PVLVHC~AGKDRTGALvaLlr~~-lGvs-----~edAiaDYLlsn 387 (943)
... ..++||||||.+|++|||+++++++.. .|++ .++|++..-...
T Consensus 103 ~~~-~~~~~VlVHC~aG~~RSg~~v~aylm~~~~~~~~~v~~~~A~~~vr~~R 154 (176)
T 3cm3_A 103 KCD-QRNEPVLVHSAAGVNRSGAMILAYLMSKNKESLPMLYFLYVYHSMRDLR 154 (176)
T ss_dssp HHH-HHTCCEEEECSSSSSHHHHHHHHHHHHHCCSSCHHHHHHHHHHHHHHHH
T ss_pred HHH-HCCCcEEEECCcCCCHHHHHHHHHHHHHhCCCCccccHHHHHHHHHHHC
Confidence 332 236899999999999999888877654 5899 888877544333
No 46
>2j16_A SDP-1, tyrosine-protein phosphatase YIL113W; hydrolase, hypothetical protein; 2.7A {Saccharomyces cerevisiae} PDB: 2j17_A* 2j16_B
Probab=98.82 E-value=5.2e-09 Score=105.70 Aligned_cols=103 Identities=10% Similarity=0.143 Sum_probs=71.1
Q ss_pred ceEEEcCCCCHhhHHHHHHcCCcEEEEcCCCcccCcchhhhhHHhhhcCCcEEEEEecCCCCCCCHHHHHHHHHHHhc--
Q 002281 267 VTFCRGGQVTEEGLKWLMEKGYKTIVDIRAERVKDNFYEAAIDDAILSGKVELIKIPVEVRTAPTMEQVEKFASLVSN-- 344 (943)
Q Consensus 267 ~~LYRSGqpT~eDLa~Lk~lGIKTVIDLRse~~ee~~~~a~e~e~~e~~GI~yIhIPV~d~~~Ps~E~v~aFlelL~d-- 344 (943)
+.||.|+.++..++ +||++|||++.+. .. +. ....|++|+++|+.+. .+..+.+..+.+++++
T Consensus 50 ~~LylG~~~~a~d~-----~gIt~Vlnv~~e~--~~-~~------~~~~~i~y~~ip~~d~-~~i~~~~~~~~~fI~~~~ 114 (182)
T 2j16_A 50 EKIYLYSEPTVKEL-----LPFDVVINVAEEA--ND-LR------MQVPAVEYHHYRWEHD-SQIALDLPSLTSIIHAAT 114 (182)
T ss_dssp TTEEEEESCCTTTT-----TTCSEEEECCSCC-----------------CCEEEECCCSSG-GGGGGGHHHHHHHHHHHH
T ss_pred CcEEEeCHHHHHHH-----hCCCEEEEecCCC--CC-ch------hccCCceEEEEecCCC-chHHHHHHHHHHHHHHHH
Confidence 36999998887652 7999999998764 11 11 0124899999999753 3333344444444432
Q ss_pred CCCCcEEEeCccCCchHHHHHHHHHHh-cCCCHHHHHHHhh
Q 002281 345 SSKKPLYLHSKEGVWRTYAMVSRWRQY-MARCASQISGQTI 384 (943)
Q Consensus 345 s~~~PVLVHC~AGKDRTGALvaLlr~~-lGvs~edAiaDYL 384 (943)
..+++|||||.+|.+|||++++.|+.. .|++.++|++.--
T Consensus 115 ~~g~~VLVHC~~G~sRS~tvv~ayLm~~~~~s~~~A~~~v~ 155 (182)
T 2j16_A 115 TKREKILIHAQCGLSRSATLIIAYIMKYHNLSLRHSYDLLK 155 (182)
T ss_dssp HTTCCEEEEESSCCSHHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred hcCCeEEEECCCCCChHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 356899999999999999887776543 6999999987443
No 47
>3f41_A Phytase; tandem repeat, protein tyrosine phosphatase, inositol phosphatase, hydrolase; 2.30A {Mitsuokella multacida}
Probab=98.81 E-value=1.7e-09 Score=126.83 Aligned_cols=210 Identities=13% Similarity=0.143 Sum_probs=122.3
Q ss_pred cccccccccccccccccccccCCchhhhhhhhhhhhhHHHHHHHhccCCCCCchhhHHHHHHHHh---hhcccCCC-CCC
Q 002281 161 SGRSSIMNAYRVADISMTEDQLPPLAIFRSEMKRCCESMHIALENYLTPEDVRSLDVWRKLQRLK---NVCYDSGF-PRG 236 (943)
Q Consensus 161 s~~~~~~~nf~~~~~~~~~~~~p~l~l~r~~l~~~~~~l~~~l~~yl~p~~~~sl~v~rkLqr~~---n~~~d~g~-pR~ 236 (943)
.....|++|||.+.+....-..++....|++|.+ |+++...+++..+-+++ |..+. ...+.+.. .+.
T Consensus 52 ~~~~~lP~~fR~~~~~~~~~~~~~~~p~~~Gl~~----L~IsGsaQpS~~~l~~i-----l~~l~~~~~~VvwVDLREEs 122 (629)
T 3f41_A 52 ADVNQLPRNFRMGSDKYVGVTKTGIMPTRKGMDT----MNVSASSCFSEKELEAI-----LKKVPVKPSQFYDVDLRGES 122 (629)
T ss_dssp CCCSSCCTTCEETTCCCCSCCSSSCCCCCTTSTT----SCEEEESCCCHHHHHHH-----HHHSSSCGGGEEEEEEECSC
T ss_pred CCccccchHhhhccccccccCCCCCCCCccchhh----cCccccCCCCHHHHHHH-----HHHhccCCCCeEEEECCccc
Confidence 3445788999986662211012356677888884 44445555444431111 11111 11333344 246
Q ss_pred CCCCCCcCCCCceeeeccCCccccccCCCcceEEEc-CCCCHhhHHHHHHcCCcE---EEEcCCCc-c-cCc-----chh
Q 002281 237 DDYPIHTLFANWSPVYLSNSKDDIASKDSEVTFCRG-GQVTEEGLKWLMEKGYKT---IVDIRAER-V-KDN-----FYE 305 (943)
Q Consensus 237 ~g~p~~t~iaNwr~V~l~~~~d~~~~~~~e~~LYRS-GqpT~eDLa~Lk~lGIKT---VIDLRse~-~-ee~-----~~~ 305 (943)
+++-+...+. |+... +..+. . .+ .++...+.+.|+++.-+. +..+-... . ..+ ...
T Consensus 123 hg~iNG~~vS-w~~~~-------n~~N~---G--~s~~ev~~~E~~~L~~l~~~~v~~~~~~~~~~~~~~~~~~~~v~~V 189 (629)
T 3f41_A 123 HGYLNGTAVS-WFANH-------DWGND---G--RTEDIIIPLEKEQLASLKGSTVKSIYRFDDKKNVILSPVYVNYNKV 189 (629)
T ss_dssp EEEETTEEEE-EECGG-------GCTTT---T--CCHHHHHHHHHHHHHTTSSCSEEEEEEEETTTTEEEEEEEEECSCE
T ss_pred eeeECCCEEE-cccCC-------CccCC---C--CCHHHHHHHHHHHHHHhhcCCceeeeecCCCCccccccceechhhc
Confidence 6666665553 44432 00000 0 00 022233445566662233 34443322 0 000 001
Q ss_pred hhhHHhhhcCCcEEEEEecCCCCCCCHHHHHHHHHHHhc-CCCCcEEEeCccCCchHHHHHHHHHHh---cCCCHHHHHH
Q 002281 306 AAIDDAILSGKVELIKIPVEVRTAPTMEQVEKFASLVSN-SSKKPLYLHSKEGVWRTYAMVSRWRQY---MARCASQISG 381 (943)
Q Consensus 306 a~e~e~~e~~GI~yIhIPV~d~~~Ps~E~v~aFlelL~d-s~~~PVLVHC~AGKDRTGALvaLlr~~---lGvs~edAia 381 (943)
..+.+.++..|++|++||+.|...|+++.+..|++++.. ..+.+++|||.+|++|||++.+++..+ .+++.++|+.
T Consensus 190 ~tE~el~~~~Gl~Y~Ripi~D~~~P~~e~id~fl~~v~~l~~~~~i~vHC~AG~GRTgT~m~~y~m~k~~~~~s~~diI~ 269 (629)
T 3f41_A 190 RTEEEMVKQHGANYFRLTLQDHFRPDDPDVDKFLEFYKSLPKDAWLHYHCYAGMGRTTIFMVMHDILKNAKDVSFDDIIQ 269 (629)
T ss_dssp ECHHHHHHTTTCEEEEEEECTTSCCCHHHHHHHHHHHHTSCTTCEEEEECSSSSHHHHHHHHHHHHHHHTTTSCHHHHHH
T ss_pred cCHHHHHHhCCCeEEEccCCCCCCCCHHHHHHHHHHHHhcCCCCCEEEECCCCCCHHHHHHHHHHHHhccCCCCHHHHHH
Confidence 235567889999999999999999999999999999864 245789999999999999777777544 4699999998
Q ss_pred -Hhhcccccccc
Q 002281 382 -QTITSNDVLLK 392 (943)
Q Consensus 382 -DYLlsn~~~~~ 392 (943)
++++....+..
T Consensus 270 Rq~~lgg~~~~~ 281 (629)
T 3f41_A 270 RQKLIGIVDLSE 281 (629)
T ss_dssp HHHHHSSCCTTC
T ss_pred HHHHhcCccccc
Confidence 77776644443
No 48
>3mmj_A MYO-inositol hexaphosphate phosphohydrolase; phytase, protein tyrosine phosphatase, inositol phosphate, I phosphatase; HET: IHP; 1.60A {Selenomonas ruminantium} SCOP: c.45.1.4 PDB: 1u24_A 1u25_A* 1u26_A* 3o3l_A* 3moz_A* 2pt0_A 2psz_A 3d1h_A 3d1o_A 3d1q_A 2b4u_A 2b4p_A 2b4o_A
Probab=98.67 E-value=5.5e-08 Score=106.19 Aligned_cols=208 Identities=15% Similarity=0.160 Sum_probs=120.1
Q ss_pred ccccccccccccccccccc------ccCCchhhhhhhhhhhhhHHHHHHHhccCCCCCchhhHHHHHHHHhh----hccc
Q 002281 161 SGRSSIMNAYRVADISMTE------DQLPPLAIFRSEMKRCCESMHIALENYLTPEDVRSLDVWRKLQRLKN----VCYD 230 (943)
Q Consensus 161 s~~~~~~~nf~~~~~~~~~------~~~p~l~l~r~~l~~~~~~l~~~l~~yl~p~~~~sl~v~rkLqr~~n----~~~d 230 (943)
....+|++|||...+ .+. +.=|..+.+|++|. .|.++...+.+.++.++ -|+++.. -++.
T Consensus 29 ~~~~~lP~~fR~~~~-~~~~~~~~~~~~~~~~pn~~gl~----~L~i~GsaQpS~~gl~~-----il~~L~~~~~~~vvw 98 (314)
T 3mmj_A 29 DGKEALPRNFRTSAD-ALRAPEKKFHLDAAYVPSREGMD----ALHISGSSAFTPAQLKN-----VAAKLREKTAGPIYD 98 (314)
T ss_dssp CCCSSSCTTCEETTS-CCCCCCGGGCCCTTCCCCCTTHH----HHCEEEECCCCHHHHHH-----HHHHHHTTCSSCEEE
T ss_pred Ccccccchhhhhccc-cccccccccccCCCCCCccccCC----CCccceecCCCHHHHHH-----HHHHHhccCCCcEEE
Confidence 344578899998555 221 11134455777887 56666666666555222 2444432 1333
Q ss_pred CCC-CCCCCCCCCcCCCCceeeeccCCccccccCCCcceEEEcCCCCHhhHHHHHHc-CCcEEE--EcCCCc-ccCc---
Q 002281 231 SGF-PRGDDYPIHTLFANWSPVYLSNSKDDIASKDSEVTFCRGGQVTEEGLKWLMEK-GYKTIV--DIRAER-VKDN--- 302 (943)
Q Consensus 231 ~g~-pR~~g~p~~t~iaNwr~V~l~~~~d~~~~~~~e~~LYRSGqpT~eDLa~Lk~l-GIKTVI--DLRse~-~ee~--- 302 (943)
+.. .+..+|-+...+. |+.-. +..+ ..+-+ .++-..+.+.|+++ | +.++ .+-.++ ...+
T Consensus 99 VdLREEshg~inG~~vS-~~~~~-------n~~N---~G~s~-~~v~~~E~~~l~~l~~-~~~~~~~~~~~~~~~~p~~~ 165 (314)
T 3mmj_A 99 VDLRQESHGYLDGIPVS-WYGER-------DWAN---LGKSQ-HEALADERHRLHAALH-KTVYIAPLGKHKLPEGGEVR 165 (314)
T ss_dssp EEEECSCEEEETTEEEE-EEEGG-------GCTT---TTCCH-HHHHHHHHHHHHHHTT-SEEEEECBCGGGCBBSCEEE
T ss_pred EEcCccceEEECCceee-cccCC-------CccC---CCCCH-HHHHHHHHHHHHHHhc-CCcEEEecCcccCCCCCeee
Confidence 333 2466666665553 33321 0000 00000 02222333445554 4 3332 221111 0000
Q ss_pred --chhhhhHHhhhcCCcEEEEEecCCCCCCCHHHHHHHHHHHhc-CCCCcEEEeCccCCchHHHHHHHHHHh--cCCCHH
Q 002281 303 --FYEAAIDDAILSGKVELIKIPVEVRTAPTMEQVEKFASLVSN-SSKKPLYLHSKEGVWRTYAMVSRWRQY--MARCAS 377 (943)
Q Consensus 303 --~~~a~e~e~~e~~GI~yIhIPV~d~~~Ps~E~v~aFlelL~d-s~~~PVLVHC~AGKDRTGALvaLlr~~--lGvs~e 377 (943)
.....+.+.++..|++|+++|+.|...|+++.+.+|++++.. ..+.+++|||.+|.+|||++++++..+ .+++.+
T Consensus 166 ~~~~v~te~e~~~~~Gl~Y~rlPi~D~~aP~~e~id~fl~~v~~l~~~~~i~vHC~aG~GRTgt~ma~y~ll~~~~vs~e 245 (314)
T 3mmj_A 166 RVQKVQTEQEVAEAAGMRYFRIAATDHVWPTPENIDRFLAFYRTLPQDAWLHFHSEAGVGRTTAFMVMTDMLKNPSVSLK 245 (314)
T ss_dssp ECCCEECHHHHHHHTTCEEEEEEECTTSCCCHHHHHHHHHHHHTCCTTCEEEEECSSSSHHHHHHHHHHHHHHCTTSCHH
T ss_pred chhccCCHHHHHHhCCCEEEEeCcCCCCCCCHHHHHHHHHHHHHcCCCCCEEEECCCCCchHHHHHHHHHHHHCCCCCHH
Confidence 001234567889999999999999999999999999999864 235789999999999999877775332 589999
Q ss_pred HHHH-Hhhccccccc
Q 002281 378 QISG-QTITSNDVLL 391 (943)
Q Consensus 378 dAia-DYLlsn~~~~ 391 (943)
+|++ +..+-..++.
T Consensus 246 eii~r~~~lgg~~~~ 260 (314)
T 3mmj_A 246 DILYRQHEIGGFYYG 260 (314)
T ss_dssp HHHHHHHHTTSCCCS
T ss_pred HHHHHHHHhCCcccc
Confidence 9998 5555554443
No 49
>3f41_A Phytase; tandem repeat, protein tyrosine phosphatase, inositol phosphatase, hydrolase; 2.30A {Mitsuokella multacida}
Probab=98.49 E-value=2.6e-07 Score=108.45 Aligned_cols=83 Identities=13% Similarity=0.208 Sum_probs=70.3
Q ss_pred hhhcCCcEEEEEecCCCCCCCHHHHHHHHHHHhc-CCCCcEEEeCccCCchHHHHHHHHHHh--cCCCHHHHHH-Hhhcc
Q 002281 311 AILSGKVELIKIPVEVRTAPTMEQVEKFASLVSN-SSKKPLYLHSKEGVWRTYAMVSRWRQY--MARCASQISG-QTITS 386 (943)
Q Consensus 311 ~~e~~GI~yIhIPV~d~~~Ps~E~v~aFlelL~d-s~~~PVLVHC~AGKDRTGALvaLlr~~--lGvs~edAia-DYLls 386 (943)
.++..|++|++||+.|...|+++.+..|++++.. ..+.+++|||.+|.+|||++.++++.+ .+++.++|++ ++++-
T Consensus 493 ~~~~~Gi~Y~Ripi~D~~aP~~e~id~fl~~v~~lp~~~~v~vHC~aG~GRTtT~mv~y~m~k~~~~s~~dii~rq~~lg 572 (629)
T 3f41_A 493 LVEKNGLHYYRIAATDHIWPSAANIDEFINFTRTMPANAWLHFHCQAGAGRTTAYMAMYDMMKNPDVSLGDILSRQYLLG 572 (629)
T ss_dssp HHHHTTCEEEEEEECTTSCCCHHHHHHHHHHHHHSCTTCEEEEECSSSSHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHT
T ss_pred HHHhCCCEEEEeCCCCCCCCCHHHHHHHHHHHHhcCCCCCEEEeCCCCCchHHHHHHHHHHHHcCCCCHHHHHHHHHhhC
Confidence 5667899999999999999999999999999864 345789999999999999877777544 3799999999 88888
Q ss_pred ccccccc
Q 002281 387 NDVLLKD 393 (943)
Q Consensus 387 n~~~~~~ 393 (943)
..++..+
T Consensus 573 g~~l~~~ 579 (629)
T 3f41_A 573 GNYVAYE 579 (629)
T ss_dssp SCCTTCC
T ss_pred ceecccc
Confidence 7776654
No 50
>1d5r_A Phosphoinositide phosphotase PTEN; C2 domain, phosphotidylinositol, hydrolase; HET: TLA; 2.10A {Homo sapiens} SCOP: b.7.1.1 c.45.1.1
Probab=98.44 E-value=3.9e-07 Score=99.27 Aligned_cols=87 Identities=20% Similarity=0.255 Sum_probs=65.8
Q ss_pred CCcEEEEcCCCcccCcchhhhhHHhhhcCCcEEEEEecCCCCCCCHHHHHHHHHHHh----cCCCCcEEEeCccCCchHH
Q 002281 287 GYKTIVDIRAERVKDNFYEAAIDDAILSGKVELIKIPVEVRTAPTMEQVEKFASLVS----NSSKKPLYLHSKEGVWRTY 362 (943)
Q Consensus 287 GIKTVIDLRse~~ee~~~~a~e~e~~e~~GI~yIhIPV~d~~~Ps~E~v~aFlelL~----ds~~~PVLVHC~AGKDRTG 362 (943)
+...|+||..+. .|. ....+++++|+|+.|...|+.+.+..|.+.+. ...++||+|||++|++|||
T Consensus 57 ~~~~v~nl~~e~----~y~------~~~~~~~~~~~~~~D~~~P~~~~l~~~~~~i~~~l~~~~~~~VlVHC~aG~gRTG 126 (324)
T 1d5r_A 57 NHYKIYNLCAER----HYD------TAKFNCRVAQYPFEDHNPPQLELIKPFCEDLDQWLSEDDNHVAAIHCKAGKGRTG 126 (324)
T ss_dssp SCEEEEEEESSC----CCC------TTSCSSCEEEEEECTTSCCCHHHHHHHHHHHHHHHTTTSCSEEEEECSSSSHHHH
T ss_pred CcEEEEEcCCCC----CCC------hHHhCCeEEEEeecCCCCCcHHHHHHHHHHHHHHHHhcCCCeEEEECCCCCChhH
Confidence 677889996542 121 12346789999999999999888877766543 2346799999999999999
Q ss_pred HHHHHHHHhcCC--CHHHHHHHh
Q 002281 363 AMVSRWRQYMAR--CASQISGQT 383 (943)
Q Consensus 363 ALvaLlr~~lGv--s~edAiaDY 383 (943)
+++++++.+.+. +.++|++-+
T Consensus 127 t~ia~yL~~~~~~~~~~eal~~~ 149 (324)
T 1d5r_A 127 VMICAYLLHRGKFLKAQEALDFY 149 (324)
T ss_dssp HHHHHHHHHHTSCSSHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCHHHHHHHH
Confidence 999999887663 888887644
No 51
>3v0d_A Voltage-sensor containing phosphatase; PTP, hydrolase; HET: PO4; 1.10A {Ciona intestinalis} PDB: 3v0f_A* 3v0g_A 3v0h_A* 3awf_A 3v0j_A 3awe_A 3awg_A 3v0e_A 3v0i_A
Probab=98.30 E-value=2e-06 Score=94.87 Aligned_cols=95 Identities=20% Similarity=0.232 Sum_probs=71.4
Q ss_pred HHHHHHc--CCcEEEEcCCCcccCcchhhhhHHhhhcCCcEEEEEecCCCCCCCHHHHHHHHHHHh----cCCCCcEEEe
Q 002281 280 LKWLMEK--GYKTIVDIRAERVKDNFYEAAIDDAILSGKVELIKIPVEVRTAPTMEQVEKFASLVS----NSSKKPLYLH 353 (943)
Q Consensus 280 La~Lk~l--GIKTVIDLRse~~ee~~~~a~e~e~~e~~GI~yIhIPV~d~~~Ps~E~v~aFlelL~----ds~~~PVLVH 353 (943)
..+|... +--.|+||+++. .|. .+..+.++.|+|+.|...|+.+.+..|.+.+. ...+.+++||
T Consensus 56 ~~~L~~~h~~~y~V~NL~sE~----~Yd------~~~f~~~v~~~p~pD~~~P~~~~l~~~~~~v~~~l~~~~~~~v~vH 125 (339)
T 3v0d_A 56 SRFFKTKHPDKFRIYNLCSER----GYD------ETKFDNHVYRVMIDDHNVPTLVDLLKFIDDAKVWMTSDPDHVIAIH 125 (339)
T ss_dssp HHHHHHHSTTCEEEEEEETTC----CCC------GGGGTTCEEEEEECTTSCCCHHHHHHHHHHHHHHHHTCTTCEEEEE
T ss_pred HHHHHHhCCCceEEEECCCCC----CCC------hHHcCCeEEEeccCCCCCCCHHHHHHHHHHHHHHHhcCCCCeEEEE
Confidence 4555443 678999998653 232 11223478899999999999988887776653 2345799999
Q ss_pred CccCCchHHHHHHHHHHhcCC--CHHHHHHHhh
Q 002281 354 SKEGVWRTYAMVSRWRQYMAR--CASQISGQTI 384 (943)
Q Consensus 354 C~AGKDRTGALvaLlr~~lGv--s~edAiaDYL 384 (943)
|++|++|||+++++++.+.|. +.++|++.+-
T Consensus 126 C~~G~gRtg~~ia~~Li~~~~~~~~~~Al~~~~ 158 (339)
T 3v0d_A 126 SKGGKGRTGTLVSSWLLEDGKFDTAKEALEYFG 158 (339)
T ss_dssp CSSSSHHHHHHHHHHHHHTTSCSSHHHHHHHHH
T ss_pred eCCCCcchHHHHHHHHHHhcCCCCHHHHHHHHH
Confidence 999999999999999888776 7888877554
No 52
>3n0a_A Tyrosine-protein phosphatase auxilin; phosphatase-like domain, C2 domain, hydrolase; 2.20A {Bos taurus}
Probab=98.22 E-value=3.6e-06 Score=93.60 Aligned_cols=104 Identities=11% Similarity=0.105 Sum_probs=72.5
Q ss_pred eEEEcCCCCHhhHHHHHHc--CCcEEEEcCCCcccCcchhhhhHHhhhcCCcEEEEEecCCCCCCCHHHHHHHHHHHh--
Q 002281 268 TFCRGGQVTEEGLKWLMEK--GYKTIVDIRAERVKDNFYEAAIDDAILSGKVELIKIPVEVRTAPTMEQVEKFASLVS-- 343 (943)
Q Consensus 268 ~LYRSGqpT~eDLa~Lk~l--GIKTVIDLRse~~ee~~~~a~e~e~~e~~GI~yIhIPV~d~~~Ps~E~v~aFlelL~-- 343 (943)
..|| .+-++=..+|... |--.|+||+... |.. ....-+++|+|+.|...|+.+.+..|.+.+.
T Consensus 43 ~~yr--n~i~~v~~~L~~~H~~~y~V~NLse~~-----Yd~------~~f~~~V~~~~~pD~~~P~l~~l~~~~~~i~~~ 109 (361)
T 3n0a_A 43 IGFR--NQVDDIRSFLDSRHLDHYTVYNLSPKS-----YRT------AKFHSRVSECSWPIRQAPSLHNLFAVCRNMYNW 109 (361)
T ss_dssp --------CHHHHHHHHHHHTTCEEEEECSSSC-----CGG------GSCGGGEEECCCCSSSCCCHHHHHHHHHHHHHH
T ss_pred hhhc--CCHHHHHHHHHHhCCCeEEEEECCCCC-----CCh------hhcCCcEEEeecCCCCCCCHHHHHHHHHHHHHH
Confidence 4566 2334445666554 789999996432 320 1112257899999999999988877776553
Q ss_pred --cCCCCcEEEeCccCCchHHHHHHHHHHhcCC--CHHHHHHHhh
Q 002281 344 --NSSKKPLYLHSKEGVWRTYAMVSRWRQYMAR--CASQISGQTI 384 (943)
Q Consensus 344 --ds~~~PVLVHC~AGKDRTGALvaLlr~~lGv--s~edAiaDYL 384 (943)
...+.+++|||++|++|||+++++++.+.|. +.++|++-+-
T Consensus 110 l~~~~~~~v~VHC~aG~GRtg~~ia~~Li~~~~~~~~~eAl~~~~ 154 (361)
T 3n0a_A 110 LLQNPKNVCVVHCLDGRAASSILVGAMFIFCNLYSTPGPAVRLLY 154 (361)
T ss_dssp HHHCTTCEEEEEECSCTHHHHHHHHHHHHHTTSCSSHHHHHHHHH
T ss_pred HhcCCCCeEEEEeCCCCccHHHHHHHHHHHhcCCCCHHHHHHHHH
Confidence 3456799999999999999999999988776 8898887554
No 53
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=97.69 E-value=5.8e-05 Score=81.12 Aligned_cols=111 Identities=15% Similarity=0.268 Sum_probs=75.4
Q ss_pred ccCCCEEEEEecCCh---hHHHHHHHHHHHHhcCCCeEEEEc--CChhhhhhcCCCCccceeeeccCccccccCccEEEE
Q 002281 687 KTTPRTVLVLKKPGP---ALMEEAKEVASFLYHQEKMNILVE--PDVHDIFARIPGFGFVQTFYLQDTSDLHERVDFVAC 761 (943)
Q Consensus 687 ~~~pk~VlIv~K~~~---~~~~~a~~l~~~L~~~~g~~V~ve--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~DlVIv 761 (943)
++++++++||..|.. ...+.+.++..+|.+. ++++.+. ....+ ... + ..++.+++|+||+
T Consensus 5 ~~~m~~~~vi~Np~sG~~~~~~~~~~i~~~l~~~-~~~~~~~~t~~~~~-a~~---------~----~~~~~~~~d~vv~ 69 (304)
T 3s40_A 5 KTKFEKVLLIVNPKAGQGDLHTNLTKIVPPLAAA-FPDLHILHTKEQGD-ATK---------Y----CQEFASKVDLIIV 69 (304)
T ss_dssp CCSCSSEEEEECTTCSSSCHHHHHHHHHHHHHHH-CSEEEEEECCSTTH-HHH---------H----HHHHTTTCSEEEE
T ss_pred cCCCCEEEEEECcccCCCchHHHHHHHHHHHHHc-CCeEEEEEccCcch-HHH---------H----HHHhhcCCCEEEE
Confidence 345678888877753 3456677888888653 5554332 21111 000 0 0122347899999
Q ss_pred EcCCchHHHHhhhccC--CCCcEEEEeCCCCcccC-CCC-chhHHHHHHHHHcCC
Q 002281 762 LGGDGVILHASNLFRG--AVPPVISFNLGSLGFLT-SHP-FEDYRQDLRQVIYGN 812 (943)
Q Consensus 762 LGGDGTiL~Aar~~~~--~~~PVLGIN~GsLGFLt-~~~-~ed~~~~L~~ll~G~ 812 (943)
+|||||+..+++.+.. ..+|+..|.+|+...|+ .+. +.++.++++.+++|.
T Consensus 70 ~GGDGTl~~v~~~l~~~~~~~~l~iiP~Gt~N~~ar~lg~~~~~~~a~~~i~~g~ 124 (304)
T 3s40_A 70 FGGDGTVFECTNGLAPLEIRPTLAIIPGGTCNDFSRTLGVPQNIAEAAKLITKEH 124 (304)
T ss_dssp EECHHHHHHHHHHHTTCSSCCEEEEEECSSCCHHHHHTTCCSSHHHHHHHHTTCC
T ss_pred EccchHHHHHHHHHhhCCCCCcEEEecCCcHHHHHHHcCCCccHHHHHHHHHhCC
Confidence 9999999999998766 67899999999988665 343 457888999999886
No 54
>1g4w_R Protein tyrosine phosphatase SPTP; virulence factor, GTPase activating protein, 4-helix bundle, disorder, signaling protein; 2.20A {Salmonella typhimurium} SCOP: a.24.11.1 c.45.1.2 PDB: 1g4u_S
Probab=97.17 E-value=0.00069 Score=75.70 Aligned_cols=65 Identities=22% Similarity=0.198 Sum_probs=43.4
Q ss_pred cEEEEEe-cCCCCCC-CHHHHHHHHHHHhcC-----------CCCcEEEeCccCCchHHHHHHHHHHhcC--CCHHHHHH
Q 002281 317 VELIKIP-VEVRTAP-TMEQVEKFASLVSNS-----------SKKPLYLHSKEGVWRTYAMVSRWRQYMA--RCASQISG 381 (943)
Q Consensus 317 I~yIhIP-V~d~~~P-s~E~v~aFlelL~ds-----------~~~PVLVHC~AGKDRTGALvaLlr~~lG--vs~edAia 381 (943)
|..+|++ ..+...| +.+.+..|++.+... ..+|++|||.+|.+|||+++++.....+ ++..+++.
T Consensus 271 V~h~~y~~WpD~gvP~~~~~ll~~i~~v~~~~~~~~~~~~~~~~~PivVHCsAGvGRTGtfiaidll~~~~~vdv~~~v~ 350 (383)
T 1g4w_R 271 IPVLHVKNWPDHQPLPSTDQLEYLADRVKNSNQNGAPGRSSSDKHLPMIHCLGGVGRTGTMAAALVLKDNPHSNLEQVRA 350 (383)
T ss_dssp EEEEEECSCCTTSCCSSHHHHHHHHHHHHTSCCCCCTTCSCTTSSCCEEESSSSSHHHHHHHHHHHHHHCTTCCHHHHHH
T ss_pred EEEEeeCCcCCcCCCCCHHHHHHHHHHHHHHHhhhccccccCCCCCEEEEeCcCCcHHHHHHHHHHHHhCCCCCHHHHHH
Confidence 4445555 4555555 467788888777532 2479999999999999998888654323 55555543
No 55
>1fpr_A Protein-tyrosine phosphatase 1C; protein tyrosine phosphatase, substrate specificity, residue shift, signaling protein; HET: PTR; 2.50A {Homo sapiens} SCOP: c.45.1.2 PDB: 1gwz_A
Probab=97.11 E-value=0.00057 Score=72.97 Aligned_cols=45 Identities=20% Similarity=0.251 Sum_probs=32.5
Q ss_pred cCCCCCCC-HHHHHHHHHHHhc-----CCCCcEEEeCccCCchHHHHHHHH
Q 002281 324 VEVRTAPT-MEQVEKFASLVSN-----SSKKPLYLHSKEGVWRTYAMVSRW 368 (943)
Q Consensus 324 V~d~~~Ps-~E~v~aFlelL~d-----s~~~PVLVHC~AGKDRTGALvaLl 368 (943)
..+...|. .+.+..|++.+.. ..++|++|||.+|.+|||+++++.
T Consensus 175 WpD~~vP~~~~~~l~~~~~v~~~~~~~~~~~pivVHCsaGvGRTGtfia~~ 225 (284)
T 1fpr_A 175 WPDHGVPSEPGGVLSFLDQINQRQESLPHAGPIIVHSSAGIGRTGTIIVID 225 (284)
T ss_dssp SCTTSCCSCSHHHHHHHHHHHHHHTTSTTCCCEEEESSBSSHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHhhcCCCCcEEEEcCCCCcHHHHHHHHH
Confidence 34445554 4667777766632 246899999999999999888774
No 56
>2hc1_A Receptor-type tyrosine-protein phosphatase beta; protein tyrosine phosphatase, WPD-loop, sulfamic acid, inhibitor, drug design, hydrolase; 1.30A {Homo sapiens} PDB: 2h03_A 2hc2_A 2i4g_A* 2h04_A* 2h02_A 2i3u_A 2i3r_A 2i4e_A* 2i4h_A* 2i5x_A* 2ahs_A
Probab=97.04 E-value=0.0014 Score=70.37 Aligned_cols=46 Identities=24% Similarity=0.311 Sum_probs=33.0
Q ss_pred CCCCCC-CHHHHHHHHHHHhc-----CCCCcEEEeCccCCchHHHHHHHHHH
Q 002281 325 EVRTAP-TMEQVEKFASLVSN-----SSKKPLYLHSKEGVWRTYAMVSRWRQ 370 (943)
Q Consensus 325 ~d~~~P-s~E~v~aFlelL~d-----s~~~PVLVHC~AGKDRTGALvaLlr~ 370 (943)
.|...| +.+.+..|+..+.+ ..++|++|||.+|.+|||+++++...
T Consensus 190 PD~gvP~~~~~ll~~i~~v~~~~~~~~~~~PivVHCsaGvGRTGtfiai~~~ 241 (291)
T 2hc1_A 190 PDHGVPETTQSLIQFVRTVRDYINRSPGAGPTVVHCSAGVGRTGTFIALDRI 241 (291)
T ss_dssp CSSSCCSCHHHHHHHHHHHHHHHHHSSCCCCEEEECSSSSHHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCCchhHHHHHHHHH
Confidence 344455 46677777665532 35689999999999999988877543
No 57
>3b7o_A Tyrosine-protein phosphatase non-receptor type 11; SHP2, PTPN11, tyrosine phosphatase, structural genomics, STR genomics consortium, SGC, deafness; 1.60A {Homo sapiens} PDB: 3jrl_A* 3mow_A* 3o5x_A*
Probab=96.91 E-value=0.0013 Score=71.64 Aligned_cols=46 Identities=20% Similarity=0.196 Sum_probs=33.2
Q ss_pred ecCCCCCCC-HHHHHHHHHHHhc-----CCCCcEEEeCccCCchHHHHHHHH
Q 002281 323 PVEVRTAPT-MEQVEKFASLVSN-----SSKKPLYLHSKEGVWRTYAMVSRW 368 (943)
Q Consensus 323 PV~d~~~Ps-~E~v~aFlelL~d-----s~~~PVLVHC~AGKDRTGALvaLl 368 (943)
+..+...|. ++.+..|++.+.. ..++|++|||.+|.+|||+++++.
T Consensus 209 ~WpD~gvP~~~~~~l~fl~~v~~~~~~~~~~~PivVHCsaGvGRTGtfiaid 260 (316)
T 3b7o_A 209 TWPDHGVPSDPGGVLDFLEEVHHKQESIMDAGPVVVHCSAGIGRTGTFIVID 260 (316)
T ss_dssp CCCSSSCCSSSHHHHHHHHHHHHHHHTSTTCCCEEEEESSSSHHHHHHHHHH
T ss_pred CcccCCCCCChHHHHHHHHHHHHHHhhcCCCCCEEEEcCCCCcHHHHHHHHH
Confidence 344555554 4667777776632 356899999999999999888764
No 58
>1wch_A Protein tyrosine phosphatase, non-receptor type 13; hydrolase, phosphate ION, colorectal cancer alternative splicing, coiled coil, cytoskeleton; 1.85A {Homo sapiens} SCOP: c.45.1.2
Probab=96.89 E-value=0.0021 Score=70.04 Aligned_cols=45 Identities=16% Similarity=0.259 Sum_probs=33.4
Q ss_pred CCCCCC-CHHHHHHHHHHHhc-CCCCcEEEeCccCCchHHHHHHHHH
Q 002281 325 EVRTAP-TMEQVEKFASLVSN-SSKKPLYLHSKEGVWRTYAMVSRWR 369 (943)
Q Consensus 325 ~d~~~P-s~E~v~aFlelL~d-s~~~PVLVHC~AGKDRTGALvaLlr 369 (943)
.+...| +.+.+..|++.+.. ...+|++|||.+|.+|||+++++..
T Consensus 215 PD~gvP~~~~~ll~~i~~v~~~~~~~PivVHCsaGvGRTGtfiaid~ 261 (315)
T 1wch_A 215 PDHDTPSQPDDLLTFISYMRHIHRSGPIITHCSAGIGRSGTLICIDV 261 (315)
T ss_dssp CTTSCCSCHHHHHHHHHHHHHHCCSSCEEEECSSSSHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHhhCCCCCEEEEcCCCCcHHHHHHHHHH
Confidence 334445 46777888877653 3468999999999999998877653
No 59
>2b49_A Protein tyrosine phosphatase, non-receptor type 3; human, STRU genomics, structural genomics consortium, SGC, hydrolase; 1.54A {Homo sapiens}
Probab=96.82 E-value=0.0023 Score=68.60 Aligned_cols=45 Identities=20% Similarity=0.301 Sum_probs=32.3
Q ss_pred cCCCCCCC-HHHHHHHHHHHhc--CCCCcEEEeCccCCchHHHHHHHH
Q 002281 324 VEVRTAPT-MEQVEKFASLVSN--SSKKPLYLHSKEGVWRTYAMVSRW 368 (943)
Q Consensus 324 V~d~~~Ps-~E~v~aFlelL~d--s~~~PVLVHC~AGKDRTGALvaLl 368 (943)
..+...|. .+.+..|++.+.. ..++|++|||.+|.+|||+++++.
T Consensus 183 WpD~gvP~~~~~~l~~i~~v~~~~~~~~PivVHCsaGvGRTGtfia~d 230 (287)
T 2b49_A 183 WPDHGVPDDSSDFLEFVNYVRSLRVDSEPVLVHCSAGIGRTGVLVTME 230 (287)
T ss_dssp SCSSSCCSSCHHHHHHHHHHHHHCCTTCCEEEECSSSSHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHhccCCCcEEEEcCCCCcHHHHHHHHH
Confidence 34444553 4667777776643 236899999999999999887764
No 60
>3m4u_A Tyrosine specific protein phosphatase, putative; protein tyrosine phosphatase, hydrolase; 2.39A {Trypanosoma brucei}
Probab=96.81 E-value=0.0018 Score=69.99 Aligned_cols=43 Identities=19% Similarity=0.488 Sum_probs=33.2
Q ss_pred CCCC-CHHHHHHHHHHHhcC-CCCcEEEeCccCCchHHHHHHHHH
Q 002281 327 RTAP-TMEQVEKFASLVSNS-SKKPLYLHSKEGVWRTYAMVSRWR 369 (943)
Q Consensus 327 ~~~P-s~E~v~aFlelL~ds-~~~PVLVHC~AGKDRTGALvaLlr 369 (943)
...| +.+.+..|++.+... .++|++|||.+|.+|||+++++..
T Consensus 200 ~gvP~~~~~~l~~~~~v~~~~~~~PivVHCsaGvGRTGtfiai~~ 244 (306)
T 3m4u_A 200 HGVPESAASFDELLSVIKNCVTTSPILVHCSAGIGRTGTLIGAYA 244 (306)
T ss_dssp TSCCSCHHHHHHHHHHHHTCCCSSCEEEECSSSSHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHhhCCCCCEEEEcCCCCcchheeehHHH
Confidence 3445 567888888888643 368999999999999998877654
No 61
>4grz_A Tyrosine-protein phosphatase non-receptor type 6; phosphatase domain, hydrolase; 1.37A {Homo sapiens} PDB: 4gry_A 4gs0_A* 1gwz_A 1fpr_A*
Probab=96.80 E-value=0.002 Score=68.75 Aligned_cols=42 Identities=21% Similarity=0.285 Sum_probs=30.1
Q ss_pred CCC-CHHHHHHHHHHHhc-----CCCCcEEEeCccCCchHHHHHHHHH
Q 002281 328 TAP-TMEQVEKFASLVSN-----SSKKPLYLHSKEGVWRTYAMVSRWR 369 (943)
Q Consensus 328 ~~P-s~E~v~aFlelL~d-----s~~~PVLVHC~AGKDRTGALvaLlr 369 (943)
..| +...+..|++.+.. ...+|++|||.+|.+|||+++++..
T Consensus 181 gvP~~~~~~l~~~~~v~~~~~~~~~~~PivVHCsaGvGRTGtfiaid~ 228 (288)
T 4grz_A 181 GVPSEPGGVLSFLDQINQRQESLPHAGPIIVHSSAGIGRTGTIIVIDM 228 (288)
T ss_dssp SCCSSSHHHHHHHHHHHHHHHHSTTCCCEEEECSSSSHHHHHHHHHHH
T ss_pred CcccChHHHHHHHHHHHHHHhhcCCCCcEEEEeCCCCcHHHHHHHHHH
Confidence 344 44666666665531 3468999999999999998877643
No 62
>2cm2_A Tyrosine-protein phosphatase non-receptor type 1; polymorphism, phosphorylation, endoplasmic reticulum, oxidation, hydrolase, acetylation; 1.5A {Homo sapiens} SCOP: c.45.1.2 PDB: 2cm3_A 2cmb_A* 2cmc_A* 2cne_A* 3a5j_A 2cma_A 3a5k_A 3eu0_A 3sme_A 2azr_A* 2b07_A* 2h4g_A* 2h4k_A* 2hb1_A* 2qbp_A* 2qbq_A* 2qbr_A* 2qbs_A* 2zmm_A* 2zn7_A* ...
Probab=96.80 E-value=0.0025 Score=68.90 Aligned_cols=42 Identities=17% Similarity=0.214 Sum_probs=30.2
Q ss_pred CCCCC-CHHHHHHHHHHHhc-----CCCCcEEEeCccCCchHHHHHHH
Q 002281 326 VRTAP-TMEQVEKFASLVSN-----SSKKPLYLHSKEGVWRTYAMVSR 367 (943)
Q Consensus 326 d~~~P-s~E~v~aFlelL~d-----s~~~PVLVHC~AGKDRTGALvaL 367 (943)
+...| +.+.+..|+..+.. ..++|++|||.+|.+|||+++++
T Consensus 187 D~gvP~~~~~~l~~l~~v~~~~~~~~~~~PivVHCsaGvGRTGtfiai 234 (304)
T 2cm2_A 187 DFGVPESPASFLNFLFKVRESGSLSPEHGPVVVHCSAGIGRSGTFCLA 234 (304)
T ss_dssp SSSCCSSSHHHHHHHHHHHHHTTTSTTSBCEEEESSSSSSHHHHHHHH
T ss_pred cCCCCCCHHHHHHHHHHHHHHhhccCCCCcEEEEcCcCCchhhHHHHH
Confidence 33445 35666677766642 24689999999999999988776
No 63
>4az1_A Tyrosine specific protein phosphatase; hydrolase, drug design; 2.18A {Trypanosoma cruzi}
Probab=96.74 E-value=0.0021 Score=69.21 Aligned_cols=42 Identities=24% Similarity=0.440 Sum_probs=32.6
Q ss_pred CCC-CHHHHHHHHHHHhcC-CCCcEEEeCccCCchHHHHHHHHH
Q 002281 328 TAP-TMEQVEKFASLVSNS-SKKPLYLHSKEGVWRTYAMVSRWR 369 (943)
Q Consensus 328 ~~P-s~E~v~aFlelL~ds-~~~PVLVHC~AGKDRTGALvaLlr 369 (943)
..| +...+..|++.+... ..+|++|||.+|.+|||+++++..
T Consensus 198 gvP~~~~~~l~~~~~v~~~~~~~PivVHCsaGvGRTGtfiai~~ 241 (302)
T 4az1_A 198 GIPQSATSLEALLTNVKNSPTTVPVVVHCSAGIGRTGTLIGAYA 241 (302)
T ss_dssp SCCSCHHHHHHHHHHHHHSCTTSCEEEESSSSSSHHHHHHHHHH
T ss_pred CccCCHHHHHHHHHHHHHhCCCCCEEEECCCCCcHHHHHHHHHH
Confidence 345 467788888877543 468999999999999998887643
No 64
>1p15_A Protein-tyrosine phosphatase alpha; transmembrane, hydrolase, phosphorylation; 2.00A {Mus musculus} SCOP: c.45.1.2
Probab=96.73 E-value=0.0011 Score=69.65 Aligned_cols=46 Identities=17% Similarity=0.191 Sum_probs=31.4
Q ss_pred CCCCCCC-HHHHHHHHHHHh----cCCCCcEEEeCccCCchHHHHHHHHHH
Q 002281 325 EVRTAPT-MEQVEKFASLVS----NSSKKPLYLHSKEGVWRTYAMVSRWRQ 370 (943)
Q Consensus 325 ~d~~~Ps-~E~v~aFlelL~----ds~~~PVLVHC~AGKDRTGALvaLlr~ 370 (943)
.+...|. .+.+..|++.+. ...++|++|||.+|.+|||+++++...
T Consensus 149 pd~gvP~~~~~~l~~i~~v~~~~~~~~~~pivVHCsaGvGRTGtfia~~~~ 199 (253)
T 1p15_A 149 PEVGIPSDGKGMINIIAAVQKQQQQSGNHPITVHCSAGAGRTGTFCALSTV 199 (253)
T ss_dssp CSSSCCSSSCSHHHHHHHHHHHTTTTTSCCEEEESSSSSHHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHhhhccCCCCEEEEcCCCCchhHHHHHHHHH
Confidence 3444453 345555555543 235689999999999999988877644
No 65
>1jln_A STEP-like ptpase, protein tyrosine phosphatase, receptor type, R; PTP-SL, PTPBR7, ERK2-MAP kinase regulation, hydrolase; 1.81A {Mus musculus} SCOP: c.45.1.2 PDB: 2a8b_A
Probab=96.71 E-value=0.0019 Score=69.57 Aligned_cols=45 Identities=16% Similarity=0.256 Sum_probs=31.9
Q ss_pred CCCCCCC-HHHHHHHHHHHhc-----CCCCcEEEeCccCCchHHHHHHHHH
Q 002281 325 EVRTAPT-MEQVEKFASLVSN-----SSKKPLYLHSKEGVWRTYAMVSRWR 369 (943)
Q Consensus 325 ~d~~~Ps-~E~v~aFlelL~d-----s~~~PVLVHC~AGKDRTGALvaLlr 369 (943)
.+...|. ...+..|+..+.. ..++|++|||.+|.+|||+++++..
T Consensus 194 PD~gvP~~~~~ll~~i~~v~~~~~~~~~~~PivVHCsaGvGRTGtfia~~~ 244 (297)
T 1jln_A 194 PDHKTPDSAQPLLQLMLDVEEDRLASEGRGPVVVHCSAGIGRTGCFIATSI 244 (297)
T ss_dssp CTTSSCSCSHHHHHHHHHHHHHHHTCTTSCCEEEESSSSSHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCEEEEeCCCchhhHHHHHHHH
Confidence 4444553 4566666666532 3578999999999999998887654
No 66
>1l8k_A T-cell protein-tyrosine phosphatase; hydrolase; 2.56A {Homo sapiens} SCOP: c.45.1.2
Probab=96.68 E-value=0.0031 Score=68.51 Aligned_cols=57 Identities=14% Similarity=0.063 Sum_probs=37.6
Q ss_pred CCCC-CHHHHHHHHHHHhc-----CCCCcEEEeCccCCchHHHHHHHHHH---h-c--CCCHHHHHHHh
Q 002281 327 RTAP-TMEQVEKFASLVSN-----SSKKPLYLHSKEGVWRTYAMVSRWRQ---Y-M--ARCASQISGQT 383 (943)
Q Consensus 327 ~~~P-s~E~v~aFlelL~d-----s~~~PVLVHC~AGKDRTGALvaLlr~---~-l--Gvs~edAiaDY 383 (943)
...| +.+.+..|+..+.. ...+|++|||.+|.+|||+++++... + . .++..+++...
T Consensus 183 ~gvP~~~~~~l~~l~~v~~~~~~~~~~~PivVHCsaGvGRTGtfiaid~~l~~l~~~~~vdv~~~v~~l 251 (314)
T 1l8k_A 183 FGVPESPASFLNFLFKVRESGSLNPDHGPAVIHCSAGIGRSGTFSLVDTCLVLMEKGDDINIKQVLLNM 251 (314)
T ss_dssp SSCCSCSHHHHHHHHHHHHTTTTSTTSCCEEEEESSSSSHHHHHHHHHHHHHHSSSSCCCCHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHhhccCCCCcEEEEcCCCCcHHHHHHHHHHHHHHHHhcCCCCHHHHHHHH
Confidence 3445 35667777776643 23689999999999999988776422 1 1 26666665543
No 67
>2oc3_A Tyrosine-protein phosphatase non-receptor type 18; protein tyrosine phosphatase, human, structural genomics, structural genomics consortium, SGC; 1.50A {Homo sapiens}
Probab=96.60 E-value=0.0038 Score=67.51 Aligned_cols=41 Identities=20% Similarity=0.268 Sum_probs=29.7
Q ss_pred CCC-CHHHHHHHHHHHh---cCCCCcEEEeCccCCchHHHHHHHH
Q 002281 328 TAP-TMEQVEKFASLVS---NSSKKPLYLHSKEGVWRTYAMVSRW 368 (943)
Q Consensus 328 ~~P-s~E~v~aFlelL~---ds~~~PVLVHC~AGKDRTGALvaLl 368 (943)
..| +.+.+..|++.+. ...++|++|||.+|.+|||+++++.
T Consensus 203 gvP~~~~~~l~~i~~v~~~~~~~~~PivVHCsaGvGRTGtfiaid 247 (303)
T 2oc3_A 203 GVPSSPDHMLAMVEEARRLQGSGPEPLCVHCSAGCGRTGVLCTVD 247 (303)
T ss_dssp SCCSCSHHHHHHHHHHHHHHCSSCCCEEEECSSSSHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHhcCCCCcEEEEECCCCcceeEEEeHH
Confidence 344 3456666666553 2356899999999999999888875
No 68
>2i75_A Tyrosine-protein phosphatase non-receptor type 4; PTPN4, PTP, tyrosine phosphatase, MEG-1, structural genomics structural genomics consortium, SGC; 2.45A {Homo sapiens}
Probab=96.59 E-value=0.0036 Score=68.35 Aligned_cols=43 Identities=21% Similarity=0.370 Sum_probs=31.0
Q ss_pred CCCCCC-CHHHHHHHHHHHhc---CCCCcEEEeCccCCchHHHHHHH
Q 002281 325 EVRTAP-TMEQVEKFASLVSN---SSKKPLYLHSKEGVWRTYAMVSR 367 (943)
Q Consensus 325 ~d~~~P-s~E~v~aFlelL~d---s~~~PVLVHC~AGKDRTGALvaL 367 (943)
.+...| +.+.+..|+..+.. ..++|++|||.+|.+|||+++++
T Consensus 211 PD~gvP~~~~~~l~~i~~v~~~~~~~~~PivVHCsaGvGRTGtfiai 257 (320)
T 2i75_A 211 PDHGVPDDSSDFLDFVCHVRNKRAGKEEPVVVHCSAGIGRTGVLITM 257 (320)
T ss_dssp CSSSSCSCTHHHHHHHHHHHHHHTTCCSCEEEECSSSSSHHHHHHHH
T ss_pred CCCCCCCchHHHHHHHHHHHHHhccCCCCEEEEcCCCCcHHHHHHHH
Confidence 344445 35666677666542 24689999999999999988776
No 69
>1yfo_A D1, receptor protein tyrosine phosphatase alpha; hydrolase, signal transduction, glycoprotein, phosphorylation, signal; 2.25A {Mus musculus} SCOP: c.45.1.2
Probab=96.56 E-value=0.0031 Score=68.13 Aligned_cols=44 Identities=25% Similarity=0.141 Sum_probs=31.4
Q ss_pred CCCCC-CHHHHHHHHHHHhc---CCCCcEEEeCccCCchHHHHHHHHH
Q 002281 326 VRTAP-TMEQVEKFASLVSN---SSKKPLYLHSKEGVWRTYAMVSRWR 369 (943)
Q Consensus 326 d~~~P-s~E~v~aFlelL~d---s~~~PVLVHC~AGKDRTGALvaLlr 369 (943)
+...| +...+..|++.+.. ...+|++|||.+|.+|||+++++..
T Consensus 200 D~gvP~~~~~~l~~i~~v~~~~~~~~~PivVHCsaGvGRTGtfiaid~ 247 (302)
T 1yfo_A 200 DFGVPFTPIGMLKFLKKVKACNPQYAGAIVVHCSAGVGRTGTFVVIDA 247 (302)
T ss_dssp SSSCCSCSHHHHHHHHHHHHHSCTTSCCEEEECSSSSHHHHHHHHHHH
T ss_pred CCCcCCCHHHHHHHHHHHHHhccCCCCCEEEECCCCCcHHHHHHHHHH
Confidence 33444 34566777766642 3468999999999999998887643
No 70
>2gjt_A Receptor-type tyrosine-protein phosphatase PTPro; tyrosine phosphatase, glepp1, PTPU2, structural genom structural genomics consortium, SGC; 2.15A {Homo sapiens} PDB: 2g59_A 2pi7_A
Probab=96.56 E-value=0.0026 Score=68.47 Aligned_cols=45 Identities=29% Similarity=0.397 Sum_probs=31.6
Q ss_pred cCCCCCCCH---HHHHHHHHHHhc---CCCCcEEEeCccCCchHHHHHHHH
Q 002281 324 VEVRTAPTM---EQVEKFASLVSN---SSKKPLYLHSKEGVWRTYAMVSRW 368 (943)
Q Consensus 324 V~d~~~Ps~---E~v~aFlelL~d---s~~~PVLVHC~AGKDRTGALvaLl 368 (943)
..+...|.. +.+..|++.+.. ..++|++|||.+|.+|||+++++.
T Consensus 187 WPD~gvP~~~~~~~~l~~i~~v~~~~~~~~~PivVHCsaGvGRTGtfiaid 237 (295)
T 2gjt_A 187 WPDHGVPTANAAESILQFVHMVRQQATKSKGPMIIHCSAGVGRTGTFIALD 237 (295)
T ss_dssp CCCSSSCCHHHHHHHHHHHHHHHHHHHHCCSCEEEESSSSSHHHHHHHHHH
T ss_pred CCCCCCCCcccHHHHHHHHHHHHHhhccCCCcEEEEECCCCccchHHHHHH
Confidence 345556764 345556555432 357899999999999999887763
No 71
>2cjz_A Human protein tyrosine phosphatase PTPN5; protein phosphatase, STEP, hydrolase; HET: PTR; 1.70A {Homo sapiens} PDB: 2bij_A 2bv5_A*
Probab=96.55 E-value=0.0038 Score=67.69 Aligned_cols=43 Identities=19% Similarity=0.292 Sum_probs=30.6
Q ss_pred CCCC-CHHHHHHHHHHHhc------CCCCcEEEeCccCCchHHHHHHHHH
Q 002281 327 RTAP-TMEQVEKFASLVSN------SSKKPLYLHSKEGVWRTYAMVSRWR 369 (943)
Q Consensus 327 ~~~P-s~E~v~aFlelL~d------s~~~PVLVHC~AGKDRTGALvaLlr 369 (943)
...| +...+..|+..+.. ..++|++|||.+|.+|||+++++..
T Consensus 204 ~gvP~~~~~ll~~i~~v~~~~~~~~~~~~PivVHCsaGvGRTGtfiaid~ 253 (305)
T 2cjz_A 204 QKTPDRAPPLLHLVREVEEAAQQEGPHCAPIIVHSSAGIGRTGCFIATSI 253 (305)
T ss_dssp SCCGGGHHHHHHHHHHHHHHHHHTCSSCCCEEEEESSSSHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHhhcccCCCCCEEEEeCCCcchhHHHHHHHH
Confidence 3344 34566666665532 3578999999999999998887753
No 72
>2p6x_A Tyrosine-protein phosphatase non-receptor type 22; tyrosine phosphatase, lymphoid phosphatase, PEP, LYP, struct genomics; 1.90A {Homo sapiens} PDB: 3h2x_A 3brh_A 2qct_A* 2qcj_A* 3olr_A* 3omh_A*
Probab=96.48 E-value=0.003 Score=68.60 Aligned_cols=43 Identities=16% Similarity=0.226 Sum_probs=30.6
Q ss_pred CCCCCC-HHHHHHHHHHHhc---CCCCcEEEeCccCCchHHHHHHHH
Q 002281 326 VRTAPT-MEQVEKFASLVSN---SSKKPLYLHSKEGVWRTYAMVSRW 368 (943)
Q Consensus 326 d~~~Ps-~E~v~aFlelL~d---s~~~PVLVHC~AGKDRTGALvaLl 368 (943)
+...|. .+.+..|+..+.. ..++|++|||.+|.+|||+++++.
T Consensus 195 D~gvP~~~~~~l~~i~~v~~~~~~~~~PivVHCsaGvGRTGtfiaid 241 (309)
T 2p6x_A 195 DHDVPSSIDPILELIWDVRCYQEDDSVPICIHCSAGCGRTGVICAID 241 (309)
T ss_dssp CTTCGGGGHHHHHHHHHHHHHCCSCSSCEEEECSSSSSHHHHHHHHH
T ss_pred cCCCCCCHHHHHHHHHHHHHHhccCCCcEEEEeCCCCcHHHHHHHHH
Confidence 334443 4566666666532 346899999999999999888764
No 73
>1zc0_A Tyrosine-protein phosphatase, non-receptor type 7; heptp, human tyrosine phosphatase catalytic domain, LC-PTP, hydrolase; 1.85A {Homo sapiens} PDB: 2gp0_A 2qdc_A 2hvl_A 2qdp_A 2qdm_A 3o4s_A 3o4t_A* 3o4u_A* 3d44_A* 3d42_A* 2a3k_A
Probab=96.47 E-value=0.0036 Score=68.03 Aligned_cols=46 Identities=15% Similarity=0.279 Sum_probs=33.6
Q ss_pred CCCCCC-CHHHHHHHHHHHhc-----CCCCcEEEeCccCCchHHHHHHHHHH
Q 002281 325 EVRTAP-TMEQVEKFASLVSN-----SSKKPLYLHSKEGVWRTYAMVSRWRQ 370 (943)
Q Consensus 325 ~d~~~P-s~E~v~aFlelL~d-----s~~~PVLVHC~AGKDRTGALvaLlr~ 370 (943)
.+...| +.+.+..|+..+.. ..++|++|||.+|.+|||+++++...
T Consensus 205 pD~gvP~~~~~ll~~i~~v~~~~~~~~~~~PIvVHCsaGvGRTGtfiai~~~ 256 (309)
T 1zc0_A 205 PDHQTPESAGPLLRLVAEVEESPETAAHPGPIVVHCSAGIGRTGCFIATRIG 256 (309)
T ss_dssp CTTSCCSCHHHHHHHHHHHHTSCCCCSSCCCEEEEESSSSHHHHHHHHHHHH
T ss_pred cCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCEEEEeCCCcchhHHHHHHHHH
Confidence 344445 46777777777742 24689999999999999988887543
No 74
>2bzl_A Tyrosine-protein phosphatase, non-receptor type 14; PTPN14, hydrolase; 1.65A {Homo sapiens}
Probab=96.46 E-value=0.0073 Score=65.90 Aligned_cols=24 Identities=25% Similarity=0.328 Sum_probs=20.8
Q ss_pred CCCcEEEeCccCCchHHHHHHHHH
Q 002281 346 SKKPLYLHSKEGVWRTYAMVSRWR 369 (943)
Q Consensus 346 ~~~PVLVHC~AGKDRTGALvaLlr 369 (943)
.++|++|||.+|.+|||+++++..
T Consensus 251 ~~~PivVHCsaGvGRTGtfiaid~ 274 (325)
T 2bzl_A 251 RHPPIVVHCSAGVGRTGVLILSEL 274 (325)
T ss_dssp CCCCEEEESSSSSHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHH
Confidence 468999999999999998887754
No 75
>3i36_A Vascular protein tyrosine phosphatase 1; PTP, hydrolase; 1.84A {Rattus norvegicus} PDB: 2nz6_A 2cfv_A
Probab=96.41 E-value=0.0034 Score=69.05 Aligned_cols=44 Identities=27% Similarity=0.413 Sum_probs=30.9
Q ss_pred CCCCC-CHHHHHHHHHHHhc-----CCCCcEEEeCccCCchHHHHHHHHH
Q 002281 326 VRTAP-TMEQVEKFASLVSN-----SSKKPLYLHSKEGVWRTYAMVSRWR 369 (943)
Q Consensus 326 d~~~P-s~E~v~aFlelL~d-----s~~~PVLVHC~AGKDRTGALvaLlr 369 (943)
+...| +.+.+..|+..+.. ..++|++|||.+|.+|||+++++-.
T Consensus 210 D~gvP~~~~~ll~f~~~v~~~~~~~~~~~PiVVHCSAGvGRTGtfiaid~ 259 (342)
T 3i36_A 210 DHGVPDTTDLLINFRYLVRDYMKQIPPESPILVHCSAGVGRTGTFIAIDR 259 (342)
T ss_dssp SSSSCSCSHHHHHHHHHHHHHHTTSCSSCCEEEESSSSSHHHHHHHHHHH
T ss_pred cCCCCCCHHHHHHHHHHHHHHHHhCCCCCCEEEEcCCCChHHHHHHHHHH
Confidence 33444 44566666665532 2468999999999999998887653
No 76
>2ooq_A Receptor-type tyrosine-protein phosphatase T; protein tyrosine phosphatase, human, structural GE structural genomics consortium, SGC, hydrolase; HET: B3P; 1.80A {Homo sapiens} PDB: 1rpm_A 2c7s_A
Probab=96.39 E-value=0.0038 Score=66.89 Aligned_cols=46 Identities=17% Similarity=0.182 Sum_probs=32.1
Q ss_pred CCCCCCC-HHHHHHHHHHHhc---CCCCcEEEeCccCCchHHHHHHHHHH
Q 002281 325 EVRTAPT-MEQVEKFASLVSN---SSKKPLYLHSKEGVWRTYAMVSRWRQ 370 (943)
Q Consensus 325 ~d~~~Ps-~E~v~aFlelL~d---s~~~PVLVHC~AGKDRTGALvaLlr~ 370 (943)
.+...|. ...+..|++.+.. ...+|++|||.+|.+|||+++++...
T Consensus 186 pD~gvP~~~~~ll~~i~~v~~~~~~~~~PivVHCsaGvGRTGtfiai~~~ 235 (286)
T 2ooq_A 186 PDHGVPCYATGLLGFVRQVKFLNPPEAGPIVVHCSAGAGRTGCFIAIDTM 235 (286)
T ss_dssp CTTCCCSCSHHHHHHHHHHHHHSCTTSCCEEEECSSSSHHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHhcCCCCCcEEEEeCCCCcHHHHHHHHHHH
Confidence 3344453 4566666666542 24689999999999999988877543
No 77
>2i1y_A Receptor-type tyrosine-protein phosphatase; receptor-type protein tyrosine phosphatase precursor, phosph structural genomics, PSI; 2.23A {Homo sapiens} PDB: 2qep_A
Probab=96.38 E-value=0.0035 Score=67.67 Aligned_cols=38 Identities=18% Similarity=0.242 Sum_probs=29.3
Q ss_pred CHHHHHHHHHHHhc---CCCCcEEEeCccCCchHHHHHHHH
Q 002281 331 TMEQVEKFASLVSN---SSKKPLYLHSKEGVWRTYAMVSRW 368 (943)
Q Consensus 331 s~E~v~aFlelL~d---s~~~PVLVHC~AGKDRTGALvaLl 368 (943)
+...+..|++.+.. ...+|++|||.+|.+|||+++++.
T Consensus 205 ~~~~ll~~~~~v~~~~~~~~~PivVHCsaGvGRTGtfiaid 245 (301)
T 2i1y_A 205 STRPLLDFRRKVNKCYRGRSCPIIVHCSDGAGRTGTYILID 245 (301)
T ss_dssp CSHHHHHHHHHHHHSCCCSSCCEEEECSSSSHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhCCCCCCEEEEECCCCchhHHHHHHH
Confidence 35667777777643 246799999999999999887764
No 78
>1lyv_A Protein-tyrosine phosphatase YOPH; toxin, hydrolase; 1.36A {Yersinia enterocolitica} SCOP: c.45.1.2 PDB: 1qz0_A* 1ytn_A 1ytw_A 2i42_A 2y2f_A* 2ydu_A* 1xxp_A* 3blu_A* 1ypt_A* 3blt_A* 1xxv_A* 3f9b_A 3f9a_A 3f99_A 3bm8_A* 1pa9_A* 1yts_A
Probab=96.34 E-value=0.0076 Score=65.16 Aligned_cols=25 Identities=32% Similarity=0.335 Sum_probs=21.0
Q ss_pred CCCcEEEeCccCCchHHHHHHHHHH
Q 002281 346 SKKPLYLHSKEGVWRTYAMVSRWRQ 370 (943)
Q Consensus 346 ~~~PVLVHC~AGKDRTGALvaLlr~ 370 (943)
...|++|||.+|.+|||+++++...
T Consensus 233 ~~~piVVHCSAGvGRTGtfiaid~l 257 (306)
T 1lyv_A 233 SKLRPVIHSRAGVGRTAQLIGAMCM 257 (306)
T ss_dssp TSSCCEEECSSSSSHHHHHHHHHHH
T ss_pred CCCCcEEEcCCCCchhHHHHHHHHH
Confidence 3568899999999999998887543
No 79
>2b3o_A Tyrosine-protein phosphatase, non-receptor type 6; protein tyrosine phosphatase, SHP-1, signaling, hydrolase; 2.80A {Homo sapiens} PDB: 1x6c_A 2rmx_A* 2yu7_A*
Probab=96.21 E-value=0.0084 Score=69.21 Aligned_cols=43 Identities=19% Similarity=0.267 Sum_probs=30.8
Q ss_pred CCCC-CHHHHHHHHHHHhc-----CCCCcEEEeCccCCchHHHHHHHHH
Q 002281 327 RTAP-TMEQVEKFASLVSN-----SSKKPLYLHSKEGVWRTYAMVSRWR 369 (943)
Q Consensus 327 ~~~P-s~E~v~aFlelL~d-----s~~~PVLVHC~AGKDRTGALvaLlr 369 (943)
...| +.+.+..|++.+.. ..++|++|||.+|.+|||+++++..
T Consensus 420 ~gvP~~~~~~l~~~~~v~~~~~~~~~~~PivVHCsaG~GRTGtfia~d~ 468 (532)
T 2b3o_A 420 HGVPSEPGGVLSFLDQINQRQESLPHAGPIIVHCSAGIGRTGTIIVIDM 468 (532)
T ss_dssp SSCCSSSHHHHHHHHHHHHHHHHSTTCCCEEEECSSSSSHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHhhcCCCCCEEEEcCCCCchhHHHHHHHH
Confidence 3344 34666677666532 2468999999999999998887643
No 80
>2h4v_A Receptor-type tyrosine-protein phosphatase gamma; tyrosine receptor phosphatase, human, structural GENO structural genomics consortium, SGC; HET: FLC; 1.55A {Homo sapiens} PDB: 3qcd_A 3qcc_A 3qcb_A 3qce_A* 3qcf_A* 3qcg_A* 3qch_A* 3qci_A* 3qcj_A* 3qck_A* 2pbn_A 2hy3_A 3qcm_A* 3qcl_A* 3qcn_A
Probab=96.21 E-value=0.0088 Score=65.15 Aligned_cols=45 Identities=22% Similarity=0.169 Sum_probs=30.2
Q ss_pred CCCCC-CHHHHHHHHHHHhc---CCCCcEEEeCccCCchHHHHHHHHHH
Q 002281 326 VRTAP-TMEQVEKFASLVSN---SSKKPLYLHSKEGVWRTYAMVSRWRQ 370 (943)
Q Consensus 326 d~~~P-s~E~v~aFlelL~d---s~~~PVLVHC~AGKDRTGALvaLlr~ 370 (943)
+...| +...+..|+..+.. ...+|++|||.+|.+|||+++++...
T Consensus 221 D~gvP~~~~~~l~~i~~~~~~~~~~~~PivVHCsaGvGRTGtfiaid~~ 269 (320)
T 2h4v_A 221 DMGVPEYALPVLTFVRRSSAARMPETGPVLVHCSAGVGRTGTYIVIDSM 269 (320)
T ss_dssp SSSSCSCSHHHHHHHHHHHHTCCTTCCCEEEESSSSSHHHHHHHHHHHH
T ss_pred cCCCCCCHHHHHHHHHHHHhhccCCCCCEEEECCCCCcHHHHHHHHHHH
Confidence 33444 33455566655432 24689999999999999988776543
No 81
>4i8n_A Tyrosine-protein phosphatase non-receptor type 1; PTP1B, hydrolase-hydrolase inhibitor CO; HET: 1CG; 2.50A {Homo sapiens}
Probab=96.19 E-value=0.0066 Score=67.06 Aligned_cols=38 Identities=18% Similarity=0.202 Sum_probs=29.3
Q ss_pred CHHHHHHHHHHHhcC-----CCCcEEEeCccCCchHHHHHHHH
Q 002281 331 TMEQVEKFASLVSNS-----SKKPLYLHSKEGVWRTYAMVSRW 368 (943)
Q Consensus 331 s~E~v~aFlelL~ds-----~~~PVLVHC~AGKDRTGALvaLl 368 (943)
+...+..|+..+... ..+|++|||.+|.+|||+++++.
T Consensus 221 ~~~~~l~~l~~v~~~~~~~~~~~PivVHCsaGvGRTGtfiaid 263 (354)
T 4i8n_A 221 SPASFLNFLFKVRESGSLSPEHGPVVVHCSAGIGRSGTFCLAD 263 (354)
T ss_dssp CHHHHHHHHHHHHHTTTTCTTSCCEEEECSSSSHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhhccCCCCCEEEEeCCCcchHHHHHHHH
Confidence 466777777766432 45799999999999999887763
No 82
>3s3e_A Tyrosine-protein phosphatase 10D; differentiation, neurogenesis, signal transduction, developm protein, hydrolase; 2.40A {Drosophila melanogaster} PDB: 3s3f_A 3s3h_A* 3s3k_A*
Probab=96.19 E-value=0.0057 Score=66.32 Aligned_cols=40 Identities=18% Similarity=0.360 Sum_probs=29.5
Q ss_pred CHHHHHHHHHHHhc---CCCCcEEEeCccCCchHHHHHHHHHH
Q 002281 331 TMEQVEKFASLVSN---SSKKPLYLHSKEGVWRTYAMVSRWRQ 370 (943)
Q Consensus 331 s~E~v~aFlelL~d---s~~~PVLVHC~AGKDRTGALvaLlr~ 370 (943)
+...+..|++.+.+ ...+|++|||.+|.+|||+++++...
T Consensus 216 ~~~~ll~fi~~v~~~~~~~~~PIvVHCsaGvGRTGtfiaid~~ 258 (307)
T 3s3e_A 216 PPQTLVRFVRAFRDRIGAEQRPIVVHCSAGVGRSGTFITLDRI 258 (307)
T ss_dssp STHHHHHHHHHHHHHHCSCCSCEEEECSSSSHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHhcCCCCCEEEEcCCCchHHHHHHHHHHH
Confidence 45566666665532 35689999999999999988876543
No 83
>3ps5_A Tyrosine-protein phosphatase non-receptor type 6; SH2, PTP, hydrolase, signaling protein; 3.10A {Homo sapiens}
Probab=96.17 E-value=0.01 Score=69.66 Aligned_cols=38 Identities=21% Similarity=0.272 Sum_probs=28.5
Q ss_pred CHHHHHHHHHHHhc-----CCCCcEEEeCccCCchHHHHHHHH
Q 002281 331 TMEQVEKFASLVSN-----SSKKPLYLHSKEGVWRTYAMVSRW 368 (943)
Q Consensus 331 s~E~v~aFlelL~d-----s~~~PVLVHC~AGKDRTGALvaLl 368 (943)
+...+..|+..+.. ...+|++|||.+|.+|||+++++-
T Consensus 425 ~~~~~l~fl~~v~~~~~~~~~~~PivVHCsaGvGRTGtfiaid 467 (595)
T 3ps5_A 425 EPGGVLSFLDQINQRQESLPHAGPIIVHSSAGIGRTGTIIVID 467 (595)
T ss_dssp CSHHHHHHHHHHHHHHHHCTTCCCEEEECSSSSHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhhcCCCCCEEEEcCCCCchHHHHHHHH
Confidence 34566666666532 256899999999999999887764
No 84
>1ygr_A CD45 protein tyrosine phosphatase; protein tyrosine phosphatase, RPTP, LCA, lymphocyte activation, hydrolase; HET: PTR; 2.90A {Homo sapiens} PDB: 1ygu_A*
Probab=96.14 E-value=0.011 Score=69.46 Aligned_cols=45 Identities=18% Similarity=0.323 Sum_probs=33.0
Q ss_pred CCCCC-CHHHHHHHHHHHhc-------------CCCCcEEEeCccCCchHHHHHHHHHH
Q 002281 326 VRTAP-TMEQVEKFASLVSN-------------SSKKPLYLHSKEGVWRTYAMVSRWRQ 370 (943)
Q Consensus 326 d~~~P-s~E~v~aFlelL~d-------------s~~~PVLVHC~AGKDRTGALvaLlr~ 370 (943)
+...| +...+..|+..+.. ...+|++|||.+|.+|||+++++...
T Consensus 504 d~gvP~~~~~ll~~i~~v~~~~~~~~~~~~~~~~~~~PivVHCsaGvGRTGtf~ai~~~ 562 (610)
T 1ygr_A 504 VEQLPAEPKELISMIQVVKQKLPQKNSSEGNKHHKSTPLLIHCRDGSQQTGIFCALLNL 562 (610)
T ss_dssp SSSCCSCHHHHHHHHHHHHTTSCCCC-------CCCCCEEEEESSSSTTHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHhhhhccccccccCCCCCEEEEeCCCCcchhHHHHHHHH
Confidence 34444 56777777777643 13579999999999999988887543
No 85
>4ge6_A Tyrosine-protein phosphatase non-receptor type 9; hydrolase-hydrolase inhibitor complex; HET: B26; 1.40A {Homo sapiens} PDB: 4ge2_A* 4ge5_A* 2pa5_A*
Probab=96.08 E-value=0.0059 Score=66.35 Aligned_cols=23 Identities=26% Similarity=0.352 Sum_probs=19.9
Q ss_pred CCCcEEEeCccCCchHHHHHHHH
Q 002281 346 SKKPLYLHSKEGVWRTYAMVSRW 368 (943)
Q Consensus 346 ~~~PVLVHC~AGKDRTGALvaLl 368 (943)
.++|++|||.+|.+|||+++++-
T Consensus 232 ~~~PivVHCSaGvGRTGtfiaid 254 (314)
T 4ge6_A 232 PEPPIVVHCSAGIGRTGTFCSLD 254 (314)
T ss_dssp CSCCEEEECSSSSHHHHHHHHHH
T ss_pred CCCCEEEECCCCCcHHHHHHHHH
Confidence 35799999999999999888764
No 86
>2shp_A SHP-2, SYP, SHPTP-2; tyrosine phosphatase, insulin signaling, SH2 protein; HET: CAT; 2.00A {Homo sapiens} SCOP: c.45.1.2 d.93.1.1 d.93.1.1
Probab=95.77 E-value=0.012 Score=67.76 Aligned_cols=43 Identities=21% Similarity=0.225 Sum_probs=31.6
Q ss_pred CCCC-CHHHHHHHHHHHhc-----CCCCcEEEeCccCCchHHHHHHHHH
Q 002281 327 RTAP-TMEQVEKFASLVSN-----SSKKPLYLHSKEGVWRTYAMVSRWR 369 (943)
Q Consensus 327 ~~~P-s~E~v~aFlelL~d-----s~~~PVLVHC~AGKDRTGALvaLlr 369 (943)
...| +...+..|++.+.. ..++|++|||.+|.+|||+++++..
T Consensus 426 ~gvP~~~~~~l~~~~~v~~~~~~~~~~~PivVHCsaGvGRTGtfiaid~ 474 (525)
T 2shp_A 426 HGVPSDPGGVLDFLEEVHHKQESIMDAGPVVVHCSAGIGRTGTFIVIDI 474 (525)
T ss_dssp SSCCSCHHHHHHHHHHHHHHHHHSTTCCCEEEECSSSSHHHHHHHHHHH
T ss_pred CCcccChHHHHHHHHHHHHHHhccCCCCCEEEEcCCCCchhHHHHHHHH
Confidence 3344 46777777776632 2468999999999999998887743
No 87
>2jjd_A Receptor-type tyrosine-protein phosphatase epsilo; transmembrane, phosphoprotein, consorti structural, glycoprotein, SGC, PTPRE, membrane genomics; 3.20A {Homo sapiens}
Probab=95.76 E-value=0.013 Score=68.80 Aligned_cols=41 Identities=27% Similarity=0.288 Sum_probs=30.7
Q ss_pred CCCC-CHHHHHHHHHHHhc---CCCCcEEEeCccCCchHHHHHHH
Q 002281 327 RTAP-TMEQVEKFASLVSN---SSKKPLYLHSKEGVWRTYAMVSR 367 (943)
Q Consensus 327 ~~~P-s~E~v~aFlelL~d---s~~~PVLVHC~AGKDRTGALvaL 367 (943)
...| +...+..|++.+.. ...+|++|||.+|.+|||+++++
T Consensus 199 ~gvP~~~~~~l~~~~~v~~~~~~~~~PivVHCsaGvGRTGtfiai 243 (599)
T 2jjd_A 199 FGVPFTPIGMLKFLKKVKTLNPVHAGPIVVHCSAGVGRTGTFIVI 243 (599)
T ss_dssp SSCCSCSHHHHHHHHHHHHHSCTTCCCEEEECSSSSSHHHHHHHH
T ss_pred CCCCCChHHHHHHHHHHHhhccCCCceEEEEeCCCCcccchhhHH
Confidence 3444 45677777777643 24689999999999999988775
No 88
>1lar_A Protein (LAR); tyrosine phosphatease, LAR protein, hydrolase; 2.00A {Homo sapiens} SCOP: c.45.1.2 c.45.1.2 PDB: 2fh7_A 2nv5_A
Probab=95.49 E-value=0.017 Score=67.56 Aligned_cols=45 Identities=24% Similarity=0.278 Sum_probs=31.0
Q ss_pred CCCCC-CHHHHHHHHHHHhc-----CCCCcEEEeCccCCchHHHHHHHHHH
Q 002281 326 VRTAP-TMEQVEKFASLVSN-----SSKKPLYLHSKEGVWRTYAMVSRWRQ 370 (943)
Q Consensus 326 d~~~P-s~E~v~aFlelL~d-----s~~~PVLVHC~AGKDRTGALvaLlr~ 370 (943)
+...| +.+.+..|+..+.. ..++|++|||.+|.+|||+++++...
T Consensus 473 D~gvP~~~~~~l~~i~~v~~~~~~~~~~~PivVHCsaGvGRTGtfiaid~~ 523 (575)
T 1lar_A 473 EQGVPKTGEGFIDFIGQVHKTKEQFGQDGPITVHCSAGVGRTGVFITLSIV 523 (575)
T ss_dssp SSSCCSSCHHHHHHHHHHHHHHHHTTCCSCEEEESSSSSSHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHHhhcCCCCcEEEEECCCCchHHHHHHHHHH
Confidence 33444 34566666655532 34689999999999999988877543
No 89
>1ygr_A CD45 protein tyrosine phosphatase; protein tyrosine phosphatase, RPTP, LCA, lymphocyte activation, hydrolase; HET: PTR; 2.90A {Homo sapiens} PDB: 1ygu_A*
Probab=95.33 E-value=0.022 Score=66.99 Aligned_cols=45 Identities=22% Similarity=0.169 Sum_probs=32.8
Q ss_pred CCCCC-CHHHHHHHHHHHhc---CCCCcEEEeCccCCchHHHHHHHHHH
Q 002281 326 VRTAP-TMEQVEKFASLVSN---SSKKPLYLHSKEGVWRTYAMVSRWRQ 370 (943)
Q Consensus 326 d~~~P-s~E~v~aFlelL~d---s~~~PVLVHC~AGKDRTGALvaLlr~ 370 (943)
+...| +...+..|++.+.. ...+|++|||.+|.+|||+++++...
T Consensus 198 D~gvP~~~~~~l~~~~~v~~~~~~~~~PivVHCsaGvGRTGtfiaid~~ 246 (610)
T 1ygr_A 198 DHGVPEDPHLLLKLRRRVNAFSNFFSGPIVVHSSAGVGRTGTYIGIDAM 246 (610)
T ss_dssp TTSCCSCHHHHHHHHHHHTTSCCTTCCCEEEECSSSSHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHhhccCCCCeEEEcCCCCCchhhHHHHHHH
Confidence 33444 46677778777643 23689999999999999988877543
No 90
>2jjd_A Receptor-type tyrosine-protein phosphatase epsilo; transmembrane, phosphoprotein, consorti structural, glycoprotein, SGC, PTPRE, membrane genomics; 3.20A {Homo sapiens}
Probab=95.24 E-value=0.02 Score=67.18 Aligned_cols=43 Identities=16% Similarity=0.247 Sum_probs=30.6
Q ss_pred CCCC-CHHHHHHHHHHHhc----CCCCcEEEeCccCCchHHHHHHHHH
Q 002281 327 RTAP-TMEQVEKFASLVSN----SSKKPLYLHSKEGVWRTYAMVSRWR 369 (943)
Q Consensus 327 ~~~P-s~E~v~aFlelL~d----s~~~PVLVHC~AGKDRTGALvaLlr 369 (943)
...| +...+..|+..+.. ..++|++|||.+|.+|||+++++..
T Consensus 493 ~gvP~~~~~ll~~i~~v~~~~~~~~~~PivVHCsaGvGRTGtfiaid~ 540 (599)
T 2jjd_A 493 IGIPAEGKGMIDLIAAVQKQQQQTGNHPITVHCSAGAGRTGTFIALSN 540 (599)
T ss_dssp SSCCSCCHHHHHHHHHHHHHHHHSTTCCEEEECSSSSSHHHHHHHHHH
T ss_pred CCCCCChHHHHHHHHHHHHHHhccCCCcEEEEeCCCCchHHHHHHHHH
Confidence 3344 34566666665532 3578999999999999998887754
No 91
>1lar_A Protein (LAR); tyrosine phosphatease, LAR protein, hydrolase; 2.00A {Homo sapiens} SCOP: c.45.1.2 c.45.1.2 PDB: 2fh7_A 2nv5_A
Probab=95.23 E-value=0.035 Score=64.89 Aligned_cols=45 Identities=20% Similarity=0.188 Sum_probs=31.9
Q ss_pred CCCCCC-CHHHHHHHHHHHhc---CCCCcEEEeCccCCchHHHHHHHHH
Q 002281 325 EVRTAP-TMEQVEKFASLVSN---SSKKPLYLHSKEGVWRTYAMVSRWR 369 (943)
Q Consensus 325 ~d~~~P-s~E~v~aFlelL~d---s~~~PVLVHC~AGKDRTGALvaLlr 369 (943)
.|...| +...+..|+..+.. ...+|++|||.+|.+|||+++++..
T Consensus 183 pD~gvP~~~~~~l~~~~~v~~~~~~~~~pivVHCsaGvGRTGtfiaid~ 231 (575)
T 1lar_A 183 PDHGVPEYPTPILAFLRRVKACNPLDAGPMVVHCSAGVGRTGCFIVIDA 231 (575)
T ss_dssp CSSSCCSCSHHHHHHHHHHHHHSCTTCCCEEEESSSSSSHHHHHHHHHH
T ss_pred CCCCcccCHHHHHHHHHHHHHhcCCCCCCEEEEecCCCcceeEEEEhHH
Confidence 334444 35666677766642 2468999999999999998877643
No 92
>2nlk_A Protein tyrosine phosphatase, receptor type, G VA (fragment); PTPRG, R-PTP gamma, protein tyrosine phosphatase gamma, D3S1 HPTPG, RPTPG, PTPG; 2.40A {Homo sapiens}
Probab=93.95 E-value=0.039 Score=65.25 Aligned_cols=25 Identities=12% Similarity=0.147 Sum_probs=21.5
Q ss_pred CCCCcEEEeCccCCchHHHHHHHHH
Q 002281 345 SSKKPLYLHSKEGVWRTYAMVSRWR 369 (943)
Q Consensus 345 s~~~PVLVHC~AGKDRTGALvaLlr 369 (943)
..++|++|||.+|.+|||+++++..
T Consensus 517 ~~~~PivVHCsaGiGRtGtf~a~~~ 541 (627)
T 2nlk_A 517 TRDGPTIVHDEYGAVSAGMLCALTT 541 (627)
T ss_dssp TCCSCEEEEESSSCHHHHHHHHHHH
T ss_pred cCCCeEEEEeCCCCchHHHHHHHHH
Confidence 4578999999999999998887753
No 93
>2nlk_A Protein tyrosine phosphatase, receptor type, G VA (fragment); PTPRG, R-PTP gamma, protein tyrosine phosphatase gamma, D3S1 HPTPG, RPTPG, PTPG; 2.40A {Homo sapiens}
Probab=93.87 E-value=0.066 Score=63.26 Aligned_cols=38 Identities=24% Similarity=0.208 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHhc---CCCCcEEEeCccCCchHHHHHHHHH
Q 002281 332 MEQVEKFASLVSN---SSKKPLYLHSKEGVWRTYAMVSRWR 369 (943)
Q Consensus 332 ~E~v~aFlelL~d---s~~~PVLVHC~AGKDRTGALvaLlr 369 (943)
...+..|++.+.. ...+|++|||.+|.+|||+++++..
T Consensus 210 ~~~ll~~i~~~~~~~~~~~~PivVHCsaGvGRTGtfiaid~ 250 (627)
T 2nlk_A 210 ALPVLTFVRRSSAARMPETGPVLVHCSAGVGRTGTYIVIDS 250 (627)
T ss_dssp SHHHHHHHHHHHHTCCSSCCCEEEECSSSSHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhhccCCCceEEEEcCCCCCCccEEEEHHH
Confidence 4455566655432 2468999999999999998877643
No 94
>3i2v_A Adenylyltransferase and sulfurtransferase MOCS3; rhodanese, UBA4, structural genomics, ubiquitin biology, structural genomics consortium, SGC; 1.25A {Homo sapiens}
Probab=92.08 E-value=0.13 Score=47.13 Aligned_cols=85 Identities=18% Similarity=0.292 Sum_probs=47.6
Q ss_pred CCCHhhHHHHHHcCC-cEEEEcCCCcccCcchhhhhHHhhhcCCcEEEEEecCCCCCCCHHHHHHHHHHHhcC-------
Q 002281 274 QVTEEGLKWLMEKGY-KTIVDIRAERVKDNFYEAAIDDAILSGKVELIKIPVEVRTAPTMEQVEKFASLVSNS------- 345 (943)
Q Consensus 274 qpT~eDLa~Lk~lGI-KTVIDLRse~~ee~~~~a~e~e~~e~~GI~yIhIPV~d~~~Ps~E~v~aFlelL~ds------- 345 (943)
+++++++..+.+.+- -.|||.|+.. + | ..-...|. +++|+........+.+..+.+.+...
T Consensus 2 ~is~~el~~~l~~~~~~~liDvR~~~-e---~-----~~ghIpgA--~~ip~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 70 (127)
T 3i2v_A 2 RVSVTDYKRLLDSGAFHLLLDVRPQV-E---V-----DICRLPHA--LHIPLKHLERRDAESLKLLKEAIWEEKQGTQEG 70 (127)
T ss_dssp EECHHHHHHHHHHTCCCEEEECSCHH-H---H-----HHCCCTTS--EECCHHHHHTTCHHHHHHHHHHHHHHHTTC---
T ss_pred CCCHHHHHHHHhCCCCeEEEECCCHH-H---h-----hheecCCc--eeCChHHHhhhhhhhHHHHHHHHhhhcccccCC
Confidence 357788877766653 5799999864 1 1 11122343 56776432222233333333333211
Q ss_pred CCCcEEEeCccCCchHHHHHHHHHH
Q 002281 346 SKKPLYLHSKEGVWRTYAMVSRWRQ 370 (943)
Q Consensus 346 ~~~PVLVHC~AGKDRTGALvaLlr~ 370 (943)
.+.||+++|..|. |+..++..++.
T Consensus 71 ~~~~ivv~C~~G~-rs~~a~~~L~~ 94 (127)
T 3i2v_A 71 AAVPIYVICKLGN-DSQKAVKILQS 94 (127)
T ss_dssp CCEEEEEECSSSS-HHHHHHHHHHH
T ss_pred CCCeEEEEcCCCC-cHHHHHHHHHH
Confidence 2349999999998 88765555544
No 95
>1vee_A Proline-rich protein family; hypothetical protein, structural genomics, rhodanese domain, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} PDB: 2dcq_A
Probab=91.17 E-value=0.21 Score=46.95 Aligned_cols=78 Identities=12% Similarity=0.055 Sum_probs=46.4
Q ss_pred CCCHhhHHHHHH-cCCcEEEEcCCCcccCcchhhhhHHhhhcCCc--------EEEEEecCCCCCCCHHHHHHHHHHHhc
Q 002281 274 QVTEEGLKWLME-KGYKTIVDIRAERVKDNFYEAAIDDAILSGKV--------ELIKIPVEVRTAPTMEQVEKFASLVSN 344 (943)
Q Consensus 274 qpT~eDLa~Lk~-lGIKTVIDLRse~~ee~~~~a~e~e~~e~~GI--------~yIhIPV~d~~~Ps~E~v~aFlelL~d 344 (943)
.++++++..+.+ .+=-.|||.|++. | | +..++ .-+|||+... + . ..|.+.+..
T Consensus 6 ~is~~e~~~~l~~~~~~~liDVR~~~-E---~--------~~~~~~~~~g~~~ga~~ip~~~~--~-~---~~~~~~l~~ 67 (134)
T 1vee_A 6 SGSAKNAYTKLGTDDNAQLLDIRATA-D---F--------RQVGSPNIKGLGKKAVSTVYNGE--D-K---PGFLKKLSL 67 (134)
T ss_dssp BCCHHHHHHHHHHCTTEEEEECSCHH-H---H--------HHTCEECCTTTSCCCEECCCCGG--G-H---HHHHHHHHT
T ss_pred ccCHHHHHHHHHhCCCeEEEEcCCHH-H---H--------hhcCCCcccccCCceEEeecccc--c-C---hhHHHHHHH
Confidence 578888876654 3334799999875 1 1 11122 2578886531 1 1 123333322
Q ss_pred ----CCCCcEEEeCccCCchHHHHHHHHHH
Q 002281 345 ----SSKKPLYLHSKEGVWRTYAMVSRWRQ 370 (943)
Q Consensus 345 ----s~~~PVLVHC~AGKDRTGALvaLlr~ 370 (943)
..+.||+|+|.+|. |+..++.++..
T Consensus 68 ~~~~~~~~~ivv~C~sG~-RS~~aa~~L~~ 96 (134)
T 1vee_A 68 KFKDPENTTLYILDKFDG-NSELVAELVAL 96 (134)
T ss_dssp TCSCGGGCEEEEECSSST-THHHHHHHHHH
T ss_pred HhCCCCCCEEEEEeCCCC-cHHHHHHHHHH
Confidence 34679999999998 88765555544
No 96
>1gmx_A GLPE protein; transferase, rhodanese, sulfurtransferase, glycerol metabolism; 1.1A {Escherichia coli} SCOP: c.46.1.3 PDB: 1gn0_A
Probab=89.72 E-value=0.88 Score=40.84 Aligned_cols=74 Identities=11% Similarity=0.134 Sum_probs=44.8
Q ss_pred CCHhhHHHHHHcCCcEEEEcCCCcccCcchhhhhHHhhhcCCcEEEEEecCCCCCCCHHHHHHHHHHHhcCCCCcEEEeC
Q 002281 275 VTEEGLKWLMEKGYKTIVDIRAERVKDNFYEAAIDDAILSGKVELIKIPVEVRTAPTMEQVEKFASLVSNSSKKPLYLHS 354 (943)
Q Consensus 275 pT~eDLa~Lk~lGIKTVIDLRse~~ee~~~~a~e~e~~e~~GI~yIhIPV~d~~~Ps~E~v~aFlelL~ds~~~PVLVHC 354 (943)
++++++..+.+.+=-.|||.|+.. + |. .-...|. +++|+. .+..++..+ ..++||+++|
T Consensus 7 i~~~~l~~~~~~~~~~liDvR~~~-e---~~-----~ghIpgA--~~ip~~--------~l~~~~~~l--~~~~~ivvyc 65 (108)
T 1gmx_A 7 INVADAHQKLQEKEAVLVDIRDPQ-S---FA-----MGHAVQA--FHLTND--------TLGAFMRDN--DFDTPVMVMC 65 (108)
T ss_dssp ECHHHHHHHHHTTCCEEEECSCHH-H---HH-----HCEETTC--EECCHH--------HHHHHHHHS--CTTSCEEEEC
T ss_pred cCHHHHHHHHhCCCCEEEEcCCHH-H---HH-----hCCCccC--EeCCHH--------HHHHHHHhc--CCCCCEEEEc
Confidence 577787766555435899999864 1 11 1112232 455542 344444433 4568999999
Q ss_pred ccCCchHHHHHHHHHH
Q 002281 355 KEGVWRTYAMVSRWRQ 370 (943)
Q Consensus 355 ~AGKDRTGALvaLlr~ 370 (943)
..|. |+..++..++.
T Consensus 66 ~~g~-rs~~a~~~L~~ 80 (108)
T 1gmx_A 66 YHGN-SSKGAAQYLLQ 80 (108)
T ss_dssp SSSS-HHHHHHHHHHH
T ss_pred CCCc-hHHHHHHHHHH
Confidence 9998 88766555544
No 97
>3d1p_A Putative thiosulfate sulfurtransferase YOR285W; atomic structure, atomic resolution structure, PSI, MCSG; HET: MSE; 0.98A {Saccharomyces cerevisiae}
Probab=89.39 E-value=0.67 Score=43.43 Aligned_cols=85 Identities=18% Similarity=0.193 Sum_probs=49.8
Q ss_pred CCCHhhHHHHHHc--CCcEEEEcCCCcccCcchhhhhHHhhhcCCcEEEEEecCCCCC---CCHHHHHHHHHHHh---cC
Q 002281 274 QVTEEGLKWLMEK--GYKTIVDIRAERVKDNFYEAAIDDAILSGKVELIKIPVEVRTA---PTMEQVEKFASLVS---NS 345 (943)
Q Consensus 274 qpT~eDLa~Lk~l--GIKTVIDLRse~~ee~~~~a~e~e~~e~~GI~yIhIPV~d~~~---Ps~E~v~aFlelL~---ds 345 (943)
.++++++..+.+. +=-.|||.|+.. + | ..-...|. +++|+..... .+.+. |.+.+. -.
T Consensus 24 ~is~~el~~~l~~~~~~~~liDvR~~~-e---~-----~~ghIpgA--inip~~~l~~~~~~~~~~---~~~~~~~~~~~ 89 (139)
T 3d1p_A 24 SYSFEDMKRIVGKHDPNVVLVDVREPS-E---Y-----SIVHIPAS--INVPYRSHPDAFALDPLE---FEKQIGIPKPD 89 (139)
T ss_dssp ECCHHHHHHHHHHTCTTEEEEECSCHH-H---H-----HHCCCTTC--EECCTTTCTTGGGSCHHH---HHHHHSSCCCC
T ss_pred eecHHHHHHHHhCCCCCeEEEECcCHH-H---H-----hCCCCCCc--EEcCHHHhhhhccCCHHH---HHHHHhccCCC
Confidence 4788888777653 335799999865 1 1 11122343 6788764321 22333 333432 13
Q ss_pred CCCcEEEeCccCCchHHHHHHHHHHhcCC
Q 002281 346 SKKPLYLHSKEGVWRTYAMVSRWRQYMAR 374 (943)
Q Consensus 346 ~~~PVLVHC~AGKDRTGALvaLlr~~lGv 374 (943)
.+.||++||..|. |+..++..++. +|.
T Consensus 90 ~~~~ivvyC~~G~-rs~~aa~~L~~-~G~ 116 (139)
T 3d1p_A 90 SAKELIFYCASGK-RGGEAQKVASS-HGY 116 (139)
T ss_dssp TTSEEEEECSSSH-HHHHHHHHHHT-TTC
T ss_pred CCCeEEEECCCCc-hHHHHHHHHHH-cCC
Confidence 4679999999997 87765555543 454
No 98
>1tq1_A AT5G66040, senescence-associated family protein; CESG, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: c.46.1.3
Probab=88.61 E-value=0.4 Score=44.76 Aligned_cols=82 Identities=15% Similarity=0.199 Sum_probs=47.5
Q ss_pred CCCHhhHHHHHHcCCcEEEEcCCCcccCcchhhhhHHhhhcCCcEEEEEecCCCC----CCCHHHHHHHHHHHhcCCCCc
Q 002281 274 QVTEEGLKWLMEKGYKTIVDIRAERVKDNFYEAAIDDAILSGKVELIKIPVEVRT----APTMEQVEKFASLVSNSSKKP 349 (943)
Q Consensus 274 qpT~eDLa~Lk~lGIKTVIDLRse~~ee~~~~a~e~e~~e~~GI~yIhIPV~d~~----~Ps~E~v~aFlelL~ds~~~P 349 (943)
.++++++..+.+.++ .|||.|+.. + |. .-...|. +++|+.... ..+.+.+..+...+ ..+.|
T Consensus 19 ~is~~e~~~~l~~~~-~lIDvR~~~-e---~~-----~ghIpgA--inip~~~~~~~~~~~~~~~~~~~~~~l--~~~~~ 84 (129)
T 1tq1_A 19 SVSVTVAHDLLLAGH-RYLDVRTPE-E---FS-----QGHACGA--INVPYMNRGASGMSKNTDFLEQVSSHF--GQSDN 84 (129)
T ss_dssp EEEHHHHHHHHHHTC-CEEEESCHH-H---HH-----HCCBTTB--EECCSCCCSTTTCCCTTTHHHHHTTTC--CTTSS
T ss_pred ccCHHHHHHHhcCCC-EEEECCCHH-H---Hh-----cCCCCCc--EECcHhhcccccccCCHHHHHHHHhhC--CCCCe
Confidence 367788877665555 699999865 1 11 1122343 677874221 11123333333322 35679
Q ss_pred EEEeCccCCchHHHHHHHHHH
Q 002281 350 LYLHSKEGVWRTYAMVSRWRQ 370 (943)
Q Consensus 350 VLVHC~AGKDRTGALvaLlr~ 370 (943)
|+++|..|. |+..++..+..
T Consensus 85 ivvyC~~G~-rs~~aa~~L~~ 104 (129)
T 1tq1_A 85 IIVGCQSGG-RSIKATTDLLH 104 (129)
T ss_dssp EEEEESSCS-HHHHHHHHHHH
T ss_pred EEEECCCCc-HHHHHHHHHHH
Confidence 999999997 88766555544
No 99
>3flh_A Uncharacterized protein LP_1913; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} PDB: 3fnj_A 3i3u_A
Probab=86.05 E-value=0.76 Score=42.54 Aligned_cols=74 Identities=9% Similarity=0.060 Sum_probs=42.0
Q ss_pred CCCHhhHHHHHHcCC--cEEEEcCCCcccCcchhhhhHHhhhcCCcEEEEEecCCCCCCCHHHHHHHHHHHhcCCCCcEE
Q 002281 274 QVTEEGLKWLMEKGY--KTIVDIRAERVKDNFYEAAIDDAILSGKVELIKIPVEVRTAPTMEQVEKFASLVSNSSKKPLY 351 (943)
Q Consensus 274 qpT~eDLa~Lk~lGI--KTVIDLRse~~ee~~~~a~e~e~~e~~GI~yIhIPV~d~~~Ps~E~v~aFlelL~ds~~~PVL 351 (943)
.++++++..+.+.+- -.|||.|+.. +. +. .-...|. +++|+. .+...+.-+ ..+.||+
T Consensus 16 ~is~~el~~~l~~~~~~~~liDvR~~~-e~--~~-----~ghIpgA--~nip~~--------~l~~~~~~l--~~~~~iv 75 (124)
T 3flh_A 16 YIDHHTVLADMQNATGKYVVLDVRNAP-AQ--VK-----KDQIKGA--IAMPAK--------DLATRIGEL--DPAKTYV 75 (124)
T ss_dssp EECHHHHHHHHHHTCCCEEEEECCCSC-HH--HH-----CCEETTC--EECCHH--------HHHHHGGGS--CTTSEEE
T ss_pred eecHHHHHHHHHcCCCCEEEEECCCHH-HH--Hh-----cCcCCCC--EECCHH--------HHHHHHhcC--CCCCeEE
Confidence 468888877766654 5899999875 10 00 0111222 445542 333222222 3467999
Q ss_pred EeCccCCch--HHHHHHHH
Q 002281 352 LHSKEGVWR--TYAMVSRW 368 (943)
Q Consensus 352 VHC~AGKDR--TGALvaLl 368 (943)
++|..|. | +..++..+
T Consensus 76 vyC~~g~-r~~s~~a~~~L 93 (124)
T 3flh_A 76 VYDWTGG-TTLGKTALLVL 93 (124)
T ss_dssp EECSSSS-CSHHHHHHHHH
T ss_pred EEeCCCC-chHHHHHHHHH
Confidence 9999998 7 44333333
No 100
>1urh_A 3-mercaptopyruvate sulfurtransferase; rhodanese; 2.8A {Escherichia coli} SCOP: c.46.1.2 c.46.1.2
Probab=85.73 E-value=1.5 Score=45.69 Aligned_cols=96 Identities=13% Similarity=0.053 Sum_probs=51.9
Q ss_pred CCCHhhHHHHHHcCCcEEEEcCCCcccCcc---hhhhhHHhhhcCCcEEEEEecCCCCC----CCHHHHHHHHHHHhcCC
Q 002281 274 QVTEEGLKWLMEKGYKTIVDIRAERVKDNF---YEAAIDDAILSGKVELIKIPVEVRTA----PTMEQVEKFASLVSNSS 346 (943)
Q Consensus 274 qpT~eDLa~Lk~lGIKTVIDLRse~~ee~~---~~a~e~e~~e~~GI~yIhIPV~d~~~----Ps~E~v~aFlelL~ds~ 346 (943)
.++.+++..+.+.+=-.|||.|+.. +... .+......-...|. +|+|+..... .+.+.+.+.+....-..
T Consensus 153 ~i~~~e~~~~~~~~~~~liDvR~~~-e~~G~~~~~~~~~~~ghIpgA--~nip~~~~~~~~~~~~~~~l~~~~~~~~~~~ 229 (280)
T 1urh_A 153 VVKVTDVLLASHENTAQIIDARPAA-RFNAEVDEPRPGLRRGHIPGA--LNVPWTELVREGELKTTDELDAIFFGRGVSY 229 (280)
T ss_dssp BCCHHHHHHHHHHTCSEEEECSCHH-HHSSCCCC----CCSSSCTTC--EECCGGGGBSSSSBCCHHHHHHHHHTTTCCS
T ss_pred EEcHHHHHHHhcCCCcEEEeCCchh-hcccccCCCCCCCcCccCCCc--eEeeHHHhhcCCccCCHHHHHHHHHHcCCCC
Confidence 4688887766554435799999975 1100 00000001112232 6788653222 23455554443221135
Q ss_pred CCcEEEeCccCCchHHHHHHHHHHhcCC
Q 002281 347 KKPLYLHSKEGVWRTYAMVSRWRQYMAR 374 (943)
Q Consensus 347 ~~PVLVHC~AGKDRTGALvaLlr~~lGv 374 (943)
++||++||.+|. |+..++..++. +|.
T Consensus 230 ~~~ivv~C~~G~-rs~~a~~~L~~-~G~ 255 (280)
T 1urh_A 230 DKPIIVSCGSGV-TAAVVLLALAT-LDV 255 (280)
T ss_dssp SSCEEEECCSSS-THHHHHHHHHH-TTC
T ss_pred CCCEEEECChHH-HHHHHHHHHHH-cCC
Confidence 689999999998 87766555543 464
No 101
>2jtq_A Phage shock protein E; solution structure rhodanese, stress response, transferase; NMR {Escherichia coli} PDB: 2jtr_A 2jts_A
Probab=85.34 E-value=0.99 Score=38.76 Aligned_cols=39 Identities=8% Similarity=0.056 Sum_probs=24.7
Q ss_pred HHHHHHHHHhcCCCCcEEEeCccCCchHHHHHHHHHHhcCC
Q 002281 334 QVEKFASLVSNSSKKPLYLHSKEGVWRTYAMVSRWRQYMAR 374 (943)
Q Consensus 334 ~v~aFlelL~ds~~~PVLVHC~AGKDRTGALvaLlr~~lGv 374 (943)
.+...+..+....+.|++++|..|. |+..++..++. +|.
T Consensus 28 ~l~~~~~~l~~~~~~~ivv~C~~g~-rs~~aa~~L~~-~G~ 66 (85)
T 2jtq_A 28 EVKERIATAVPDKNDTVKVYCNAGR-QSGQAKEILSE-MGY 66 (85)
T ss_dssp HHHHHHHHHCCCTTSEEEEEESSSH-HHHHHHHHHHH-TTC
T ss_pred HHHHHHHHhCCCCCCcEEEEcCCCc-hHHHHHHHHHH-cCC
Confidence 4444444442245689999999997 87766555544 454
No 102
>1wv9_A Rhodanese homolog TT1651; CDC25, phosphatase, sulfurtransferase, structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=84.68 E-value=0.36 Score=42.45 Aligned_cols=75 Identities=23% Similarity=0.279 Sum_probs=41.8
Q ss_pred CCHhhHHHHHHcCCcEEEEcCCCcccCcchhhhhHHhhhcCCcEEEEEecCCCCCCCHHHHHHHHHHHhcCCCCcEEEeC
Q 002281 275 VTEEGLKWLMEKGYKTIVDIRAERVKDNFYEAAIDDAILSGKVELIKIPVEVRTAPTMEQVEKFASLVSNSSKKPLYLHS 354 (943)
Q Consensus 275 pT~eDLa~Lk~lGIKTVIDLRse~~ee~~~~a~e~e~~e~~GI~yIhIPV~d~~~Ps~E~v~aFlelL~ds~~~PVLVHC 354 (943)
++++++..+.+.++ .|||.|++. +... -...|. +++|+.. +...+.-+ .. +|++++|
T Consensus 4 is~~~l~~~~~~~~-~liDvR~~~-e~~~--------ghi~gA--i~ip~~~--------l~~~~~~l--~~-~~ivvyC 60 (94)
T 1wv9_A 4 VRPEELPALLEEGV-LVVDVRPAD-RRST--------PLPFAA--EWVPLEK--------IQKGEHGL--PR-RPLLLVC 60 (94)
T ss_dssp ECGGGHHHHHHTTC-EEEECCCC---CCS--------CCSSCC--EECCHHH--------HTTTCCCC--CS-SCEEEEC
T ss_pred CCHHHHHHHHHCCC-EEEECCCHH-HHhc--------ccCCCC--EECCHHH--------HHHHHHhC--CC-CCEEEEc
Confidence 56777776655564 799999976 2110 011222 4666531 11111111 23 8999999
Q ss_pred ccCCchHHHHHHHHHHhcCC
Q 002281 355 KEGVWRTYAMVSRWRQYMAR 374 (943)
Q Consensus 355 ~AGKDRTGALvaLlr~~lGv 374 (943)
..|. |+..++..++. +|.
T Consensus 61 ~~g~-rs~~a~~~L~~-~G~ 78 (94)
T 1wv9_A 61 EKGL-LSQVAALYLEA-EGY 78 (94)
T ss_dssp SSSH-HHHHHHHHHHH-HTC
T ss_pred CCCC-hHHHHHHHHHH-cCC
Confidence 9997 87766555544 354
No 103
>3hzu_A Thiosulfate sulfurtransferase SSEA; niaid, ssgcid, infectious disease, transferase structural genomics; 2.10A {Mycobacterium tuberculosis} PDB: 3p3a_A
Probab=82.96 E-value=0.84 Score=49.19 Aligned_cols=92 Identities=11% Similarity=0.142 Sum_probs=50.0
Q ss_pred CCHhhHHHHHHcCCcEEEEcCCCcccCcc-------hhh-hhHHhhhcCCcEEEEEecCCC-----CCCCHHHHHHHHHH
Q 002281 275 VTEEGLKWLMEKGYKTIVDIRAERVKDNF-------YEA-AIDDAILSGKVELIKIPVEVR-----TAPTMEQVEKFASL 341 (943)
Q Consensus 275 pT~eDLa~Lk~lGIKTVIDLRse~~ee~~-------~~a-~e~e~~e~~GI~yIhIPV~d~-----~~Ps~E~v~aFlel 341 (943)
++.+++..+.+.+ .|||.|+.. +... |+. .....-...| -+++|.... .-.+.+.+.+.+.-
T Consensus 181 i~~~el~~~l~~~--~liDvR~~~-e~~~~~~~~~~~~~~~~~~~GhIpG--A~niP~~~~~~~~g~~~~~~~l~~~~~~ 255 (318)
T 3hzu_A 181 AFRDDVLAILGAQ--PLIDVRSPE-EYTGKRTHMPDYPEEGALRAGHIPT--AVHIPWGKAADESGRFRSREELERLYDF 255 (318)
T ss_dssp CCHHHHHHHTTTS--CEEECSCHH-HHHTSCSSCTTSCSCSCSSCSBCTT--CEECCGGGGBCTTSCBCCHHHHHHHTTT
T ss_pred ccHHHHHHhhcCC--eEEecCCHH-HhcccccCccccccccCCcCcCCCC--eeecCHHHhcCCCCcCCCHHHHHHHhcC
Confidence 5677776665555 899999975 1100 000 0000011223 366776421 12234555544422
Q ss_pred HhcCCCCcEEEeCccCCchHHHHHHHHHHhcCC
Q 002281 342 VSNSSKKPLYLHSKEGVWRTYAMVSRWRQYMAR 374 (943)
Q Consensus 342 L~ds~~~PVLVHC~AGKDRTGALvaLlr~~lGv 374 (943)
+ ..++||+++|.+|. |+...+..++.++|.
T Consensus 256 l--~~~~~ivvyC~sG~-rs~~a~~~L~~~~G~ 285 (318)
T 3hzu_A 256 I--NPDDQTVVYCRIGE-RSSHTWFVLTHLLGK 285 (318)
T ss_dssp C--CTTCCCEEECSSSH-HHHHHHHHHHHTSCC
T ss_pred C--CCCCcEEEEcCChH-HHHHHHHHHHHHcCC
Confidence 2 35689999999998 888776666544564
No 104
>3iwh_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics, C structural genomics of infectious diseases, csgid; 2.00A {Staphylococcus aureus subsp} PDB: 3mzz_A
Probab=82.82 E-value=0.45 Score=43.34 Aligned_cols=76 Identities=18% Similarity=0.204 Sum_probs=42.4
Q ss_pred CCHhhHHHHHHc-CCcEEEEcCCCcccCcchhhhhHHhhhcCCcEEEEEecCCCCCCCHHHHHHHHHHHhcCCCCcEEEe
Q 002281 275 VTEEGLKWLMEK-GYKTIVDIRAERVKDNFYEAAIDDAILSGKVELIKIPVEVRTAPTMEQVEKFASLVSNSSKKPLYLH 353 (943)
Q Consensus 275 pT~eDLa~Lk~l-GIKTVIDLRse~~ee~~~~a~e~e~~e~~GI~yIhIPV~d~~~Ps~E~v~aFlelL~ds~~~PVLVH 353 (943)
+|++++..+... .=-+|||.|++. + |. .-...|. +|+|+... ...+.-+ ..++|++++
T Consensus 4 Is~~el~~~l~~~~~~~liDvR~~~-e---~~-----~ghIpgA--~~ip~~~l--------~~~~~~l--~~~~~ivv~ 62 (103)
T 3iwh_A 4 ITTDELKNKLLESKPVQIVDVRTDE-E---TA-----MGYIPNA--KLIPMDTI--------PDNLNSF--NKNEIYYIV 62 (103)
T ss_dssp ECHHHHHHGGGSSSCCEEEECSCHH-H---HT-----TCBCTTC--EECCGGGG--------GGCGGGC--CTTSEEEEE
T ss_pred cCHHHHHHHHhCCCCeEEEECCChh-H---Hh-----cCccCCc--ccCcccch--------hhhhhhh--cCCCeEEEE
Confidence 567777554333 334799999875 1 11 1112333 56776421 1111112 356899999
Q ss_pred CccCCchHHHHHHHHHHhcC
Q 002281 354 SKEGVWRTYAMVSRWRQYMA 373 (943)
Q Consensus 354 C~AGKDRTGALvaLlr~~lG 373 (943)
|.+|. |+..++..+.. .|
T Consensus 63 C~~G~-rS~~aa~~L~~-~G 80 (103)
T 3iwh_A 63 CAGGV-RSAKVVEYLEA-NG 80 (103)
T ss_dssp CSSSS-HHHHHHHHHHT-TT
T ss_pred CCCCH-HHHHHHHHHHH-cC
Confidence 99998 88765555433 44
No 105
>3gk5_A Uncharacterized rhodanese-related protein TVG0868615; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.40A {Thermoplasma volcanium GSS1}
Probab=82.71 E-value=0.52 Score=42.70 Aligned_cols=71 Identities=17% Similarity=0.174 Sum_probs=40.4
Q ss_pred CCHhhHHHHHHcCCcEEEEcCCCcccCcchhhhhHHhhhcCCcEEEEEecCCCCCCCHHHHHHHHHHHhcCCCCcEEEeC
Q 002281 275 VTEEGLKWLMEKGYKTIVDIRAERVKDNFYEAAIDDAILSGKVELIKIPVEVRTAPTMEQVEKFASLVSNSSKKPLYLHS 354 (943)
Q Consensus 275 pT~eDLa~Lk~lGIKTVIDLRse~~ee~~~~a~e~e~~e~~GI~yIhIPV~d~~~Ps~E~v~aFlelL~ds~~~PVLVHC 354 (943)
++++++..+.+. -.|||.|++. + |. .-...|. +++|+. .+...+.-+ ..+.||+++|
T Consensus 6 is~~el~~~l~~--~~iiDvR~~~-e---~~-----~ghIpgA--~~ip~~--------~l~~~~~~l--~~~~~ivvyC 62 (108)
T 3gk5_A 6 INAADLYENIKA--YTVLDVREPF-E---LI-----FGSIANS--INIPIS--------ELREKWKIL--ERDKKYAVIC 62 (108)
T ss_dssp ECHHHHHHTTTT--CEEEECSCHH-H---HT-----TCBCTTC--EECCHH--------HHHHHGGGS--CTTSCEEEEC
T ss_pred eCHHHHHHHHcC--CEEEECCCHH-H---Hh-----cCcCCCC--EEcCHH--------HHHHHHHhC--CCCCeEEEEc
Confidence 566666655444 7899999865 1 10 0112232 455653 333222222 3567999999
Q ss_pred ccCCchHHHHHHHHH
Q 002281 355 KEGVWRTYAMVSRWR 369 (943)
Q Consensus 355 ~AGKDRTGALvaLlr 369 (943)
..|. |+..++.+++
T Consensus 63 ~~G~-rs~~aa~~L~ 76 (108)
T 3gk5_A 63 AHGN-RSAAAVEFLS 76 (108)
T ss_dssp SSSH-HHHHHHHHHH
T ss_pred CCCc-HHHHHHHHHH
Confidence 9997 8765555443
No 106
>1rhs_A Sulfur-substituted rhodanese; transferase, sulfurtransferase; 1.36A {Bos taurus} SCOP: c.46.1.2 c.46.1.2 PDB: 1boh_A 1boi_A 1orb_A 2ora_A 1dp2_A* 1rhd_A
Probab=81.47 E-value=2.8 Score=44.20 Aligned_cols=96 Identities=16% Similarity=0.048 Sum_probs=50.7
Q ss_pred CCCHhhHHHHHHcCCcEEEEcCCCcccCcch-hhhhH---HhhhcCCcEEEEEecCCCCC-----CCHHHHHHHHHHHhc
Q 002281 274 QVTEEGLKWLMEKGYKTIVDIRAERVKDNFY-EAAID---DAILSGKVELIKIPVEVRTA-----PTMEQVEKFASLVSN 344 (943)
Q Consensus 274 qpT~eDLa~Lk~lGIKTVIDLRse~~ee~~~-~a~e~---e~~e~~GI~yIhIPV~d~~~-----Ps~E~v~aFlelL~d 344 (943)
.++.+++..+.+.+=-.|||.|+.. +.... +.... ..-...| -+|+|+..... .+.+.+.+.+.-..-
T Consensus 161 ~i~~~e~~~~~~~~~~~liDvR~~~-e~~G~~~~~~~~~~~~ghIpg--A~nip~~~l~~~~~~~~~~~~l~~~~~~~~~ 237 (296)
T 1rhs_A 161 LKTYEQVLENLESKRFQLVDSRAQG-RYLGTQPEPDAVGLDSGHIRG--SVNMPFMNFLTEDGFEKSPEELRAMFEAKKV 237 (296)
T ss_dssp EECHHHHHHHHHHCCSEEEECSCHH-HHHTSSCCSSSSSCCCCEETT--CEECCGGGGBCTTSCBCCHHHHHHHHHHTTC
T ss_pred EEcHHHHHHHhcCCCceEEeCCchh-hcccccCCcccCCCcCccCCC--CEeecHHHhcCCCCcCCCHHHHHHHHHHcCC
Confidence 3577777666544434799999975 11000 00000 0011122 25777653221 234555544432211
Q ss_pred CCCCcEEEeCccCCchHHHHHHHHHHhcCC
Q 002281 345 SSKKPLYLHSKEGVWRTYAMVSRWRQYMAR 374 (943)
Q Consensus 345 s~~~PVLVHC~AGKDRTGALvaLlr~~lGv 374 (943)
..++||++||.+|. |+...+..+.. +|.
T Consensus 238 ~~~~~ivv~C~sG~-rs~~a~~~L~~-~G~ 265 (296)
T 1rhs_A 238 DLTKPLIATCRKGV-TACHIALAAYL-CGK 265 (296)
T ss_dssp CTTSCEEEECSSSS-THHHHHHHHHH-TTC
T ss_pred CCCCCEEEECCcHH-HHHHHHHHHHH-cCC
Confidence 45789999999998 88866655543 454
No 107
>2fsx_A RV0390, COG0607: rhodanese-related sulfurtransferase; RV0390 BR SAD DATA with FBAR, structural genomics, PSI; 1.80A {Mycobacterium tuberculosis}
Probab=80.96 E-value=1 Score=42.85 Aligned_cols=88 Identities=10% Similarity=0.170 Sum_probs=44.5
Q ss_pred CCCHhhHHHHHHc-CCcEEEEcCCCcccCcchhhhhHHhhhc--CC--cEEEEEecCCCCC-CCHHHHHHHHHHHhc---
Q 002281 274 QVTEEGLKWLMEK-GYKTIVDIRAERVKDNFYEAAIDDAILS--GK--VELIKIPVEVRTA-PTMEQVEKFASLVSN--- 344 (943)
Q Consensus 274 qpT~eDLa~Lk~l-GIKTVIDLRse~~ee~~~~a~e~e~~e~--~G--I~yIhIPV~d~~~-Ps~E~v~aFlelL~d--- 344 (943)
.++++++..+.+. .=-.|||.|++. + |. ..-.. .| -.-+++|+..... +.++...++.+.+.+
T Consensus 6 ~is~~el~~~l~~~~~~~liDVR~~~-e---~~----~~ghi~~~g~~pgAv~ip~~~~~~~~~~~~~~~l~~~l~~~~~ 77 (148)
T 2fsx_A 6 DITPLQAWEMLSDNPRAVLVDVRCEA-E---WR----FVGVPDLSSLGREVVYVEWATSDGTHNDNFLAELRDRIPADAD 77 (148)
T ss_dssp EECHHHHHHHHHHCTTCEEEECSCHH-H---HH----HTCEECCGGGTCCCEECCSBCTTSCBCTTHHHHHHHHCC----
T ss_pred cCCHHHHHHHHhcCCCeEEEECCCHH-H---HH----hcCCCccccCCCCcEEeeeeccccccCHHHHHHHHHHHhhccC
Confidence 3577777766543 234799999864 1 11 00011 00 1246788864111 111223333333210
Q ss_pred CCCCcEEEeCccCCchHHHHHHHHHH
Q 002281 345 SSKKPLYLHSKEGVWRTYAMVSRWRQ 370 (943)
Q Consensus 345 s~~~PVLVHC~AGKDRTGALvaLlr~ 370 (943)
..+.||+|+|..|. |+..++..++.
T Consensus 78 ~~~~~ivvyC~~G~-rS~~aa~~L~~ 102 (148)
T 2fsx_A 78 QHERPVIFLCRSGN-RSIGAAEVATE 102 (148)
T ss_dssp ---CCEEEECSSSS-THHHHHHHHHH
T ss_pred CCCCEEEEEcCCCh-hHHHHHHHHHH
Confidence 34679999999997 88755555443
No 108
>1qxn_A SUD, sulfide dehydrogenase; polysulfide-sulfur transferase, homodimer; NMR {Wolinella succinogenes} SCOP: c.46.1.3
Probab=80.10 E-value=2.9 Score=39.43 Aligned_cols=77 Identities=13% Similarity=0.112 Sum_probs=45.2
Q ss_pred CCCHhhHHHHHH-cCCcEEEEcCCCcccCcchhhhhHHh-hh--cCCcEEEEEecCCCCCCCHHHHHHHHHHHhcCCCCc
Q 002281 274 QVTEEGLKWLME-KGYKTIVDIRAERVKDNFYEAAIDDA-IL--SGKVELIKIPVEVRTAPTMEQVEKFASLVSNSSKKP 349 (943)
Q Consensus 274 qpT~eDLa~Lk~-lGIKTVIDLRse~~ee~~~~a~e~e~-~e--~~GI~yIhIPV~d~~~Ps~E~v~aFlelL~ds~~~P 349 (943)
.++++++..+.+ .+=-.|||.|++. + |. . -. ..| -+++|+.... + ... +-.-..+.|
T Consensus 24 ~is~~el~~~l~~~~~~~liDVR~~~-E---~~-----~~gh~~Ipg--Ainip~~~l~----~-~~~---~~~l~~~~~ 84 (137)
T 1qxn_A 24 MLSPKDAYKLLQENPDITLIDVRDPD-E---LK-----AMGKPDVKN--YKHMSRGKLE----P-LLA---KSGLDPEKP 84 (137)
T ss_dssp EECHHHHHHHHHHCTTSEEEECCCHH-H---HH-----HTCEECCSS--EEECCTTTSH----H-HHH---HHCCCTTSC
T ss_pred ccCHHHHHHHHhcCCCeEEEECCCHH-H---HH-----hcCCcCCCC--CEEcchHHhh----h-HHh---hccCCCCCe
Confidence 367888776655 4434899999865 1 11 1 11 223 3678876321 1 011 111145789
Q ss_pred EEEeCccCCchHHHHHHHHHH
Q 002281 350 LYLHSKEGVWRTYAMVSRWRQ 370 (943)
Q Consensus 350 VLVHC~AGKDRTGALvaLlr~ 370 (943)
|+|+|..|. |+..++..++.
T Consensus 85 ivvyC~~G~-rS~~aa~~L~~ 104 (137)
T 1qxn_A 85 VVVFCKTAA-RAALAGKTLRE 104 (137)
T ss_dssp EEEECCSSS-CHHHHHHHHHH
T ss_pred EEEEcCCCc-HHHHHHHHHHH
Confidence 999999998 88766655544
No 109
>3aay_A Putative thiosulfate sulfurtransferase; sulfurtranserase, structural genomics, PSI, structure initiative; 1.90A {Mycobacterium tuberculosis} PDB: 3aax_A 3hwi_A
Probab=79.65 E-value=2.6 Score=43.81 Aligned_cols=54 Identities=17% Similarity=0.135 Sum_probs=31.9
Q ss_pred EEEecCC-----CCCCCHHHHHHHHHHHhcCCCCcEEEeCccCCchHHHHHHHHHHhcCC
Q 002281 320 IKIPVEV-----RTAPTMEQVEKFASLVSNSSKKPLYLHSKEGVWRTYAMVSRWRQYMAR 374 (943)
Q Consensus 320 IhIPV~d-----~~~Ps~E~v~aFlelL~ds~~~PVLVHC~AGKDRTGALvaLlr~~lGv 374 (943)
+|+|... ..-.+.+.+.+.+.-+.-..++||++||..|. |+..++..++..+|.
T Consensus 194 ~~ip~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~iv~yC~~G~-rs~~a~~~L~~~~G~ 252 (277)
T 3aay_A 194 INVPWSRAANEDGTFKSDEELAKLYADAGLDNSKETIAYCRIGE-RSSHTWFVLRELLGH 252 (277)
T ss_dssp EECCGGGGBCTTSCBCCHHHHHHHHHHHTCCTTSCEEEECSSHH-HHHHHHHHHHTTSCC
T ss_pred eecCHHHhcCCCCcCCCHHHHHHHHHHcCCCCCCCEEEEcCcHH-HHHHHHHHHHHHcCC
Confidence 5677642 12234566665554332245789999999998 876554444333564
No 110
>2hhg_A Hypothetical protein RPA3614; MCSG, structural genomics, rohopseudom palustris, PSI-2, protein structure initiative; 1.20A {Rhodopseudomonas palustris}
Probab=78.87 E-value=3.5 Score=38.35 Aligned_cols=76 Identities=17% Similarity=0.144 Sum_probs=43.9
Q ss_pred CCCHhhHHHHHH--cCCcEEEEcCCCcccCcchhhhhHHhhhcCCcEEEEEecCCCCCCCHHHHHHHH--------HHHh
Q 002281 274 QVTEEGLKWLME--KGYKTIVDIRAERVKDNFYEAAIDDAILSGKVELIKIPVEVRTAPTMEQVEKFA--------SLVS 343 (943)
Q Consensus 274 qpT~eDLa~Lk~--lGIKTVIDLRse~~ee~~~~a~e~e~~e~~GI~yIhIPV~d~~~Ps~E~v~aFl--------elL~ 343 (943)
.++++++..+.+ .+=-.|||.|+.. + |. ..-...|. +|+|+.. +.... ..+
T Consensus 23 ~is~~~l~~~l~~~~~~~~liDvR~~~-e---~~----~~ghIpgA--~~ip~~~--------l~~~~~~~~~~~~~~~- 83 (139)
T 2hhg_A 23 TLTTADAIALHKSGASDVVIVDIRDPR-E---IE----RDGKIPGS--FSCTRGM--------LEFWIDPQSPYAKPIF- 83 (139)
T ss_dssp EECHHHHHHHHHTTCTTEEEEECSCHH-H---HH----HHCCCTTC--EECCGGG--------HHHHHCTTSTTCCGGG-
T ss_pred ccCHHHHHHHHhccCCCeEEEECCCHH-H---HH----hCCCCCCe--EECChHH--------HHHhcCccchhhhccC-
Confidence 468888877766 4445799999864 1 11 00122333 5677641 11100 011
Q ss_pred cCCCCcEEEeCccCCchHHHHHHHHHH
Q 002281 344 NSSKKPLYLHSKEGVWRTYAMVSRWRQ 370 (943)
Q Consensus 344 ds~~~PVLVHC~AGKDRTGALvaLlr~ 370 (943)
..+.||++||..|. |+..++.+++.
T Consensus 84 -~~~~~ivvyC~~G~-rs~~a~~~L~~ 108 (139)
T 2hhg_A 84 -QEDKKFVFYCAGGL-RSALAAKTAQD 108 (139)
T ss_dssp -GSSSEEEEECSSSH-HHHHHHHHHHH
T ss_pred -CCCCeEEEECCCCh-HHHHHHHHHHH
Confidence 34679999999997 88765555543
No 111
>4a3s_A 6-phosphofructokinase; transferase, glycolysis, degradosome; 2.30A {Bacillus subtilis} PDB: 6pfk_A 3u39_A 3pfk_A 4pfk_A* 1mto_A*
Probab=77.43 E-value=1.2 Score=48.89 Aligned_cols=51 Identities=18% Similarity=0.273 Sum_probs=35.7
Q ss_pred CccEEEEEcCCchHHHHhhhccCCCCcEEEEeC----------CCCcccCCCCchhHHHHHHHH
Q 002281 755 RVDFVACLGGDGVILHASNLFRGAVPPVISFNL----------GSLGFLTSHPFEDYRQDLRQV 808 (943)
Q Consensus 755 ~~DlVIvLGGDGTiL~Aar~~~~~~~PVLGIN~----------GsLGFLt~~~~ed~~~~L~~l 808 (943)
++|.+|++|||||+-.|. .+....+||+||-- -++||-|..+ .+.++++++
T Consensus 93 ~Id~L~~IGGdgS~~~a~-~l~~~~i~vigiPkTIDNDl~~td~t~GfdTA~~--~~~~ai~~i 153 (319)
T 4a3s_A 93 GIEGLVVIGGDGSYMGAK-KLTEHGFPCVGVPGTIDNDIPGTDFTIGFDTALN--TVIDAIDKI 153 (319)
T ss_dssp TCCEEEEEECTTHHHHHH-HHHHTTCCEEEEEEETTCCCTTCSCCEEHHHHHH--HHHHHHHHH
T ss_pred CCCEEEEeCCcHHHHHHH-HHhccCCcEEEeeccccCCCCCCCCCCCHHHHHH--HHHHHHHHH
Confidence 689999999999986554 45567899999942 2688877543 333444444
No 112
>3olh_A MST, 3-mercaptopyruvate sulfurtransferase; structural genomics, structural genomics consortium, SGC, RH fold; 2.50A {Homo sapiens}
Probab=77.25 E-value=2.8 Score=44.67 Aligned_cols=95 Identities=17% Similarity=0.049 Sum_probs=50.1
Q ss_pred CCHhhHHHHHHcCCcEEEEcCCCcccCc---chhhhhHHhhhcCCcEEEEEecCCCC-----CCCHHHHHHHHHHHhcCC
Q 002281 275 VTEEGLKWLMEKGYKTIVDIRAERVKDN---FYEAAIDDAILSGKVELIKIPVEVRT-----APTMEQVEKFASLVSNSS 346 (943)
Q Consensus 275 pT~eDLa~Lk~lGIKTVIDLRse~~ee~---~~~a~e~e~~e~~GI~yIhIPV~d~~-----~Ps~E~v~aFlelL~ds~ 346 (943)
++.+++..+.+.+=-.|||.|++. +-. ..+......-...| -+++|..... -.+.+.+.+.+.-..-..
T Consensus 177 i~~~e~~~~~~~~~~~liDvR~~~-ef~G~~~~p~~~~~~GhIpG--AiniP~~~l~~~~~~~~~~~~l~~~~~~~~~~~ 253 (302)
T 3olh_A 177 KTYEDIKENLESRRFQVVDSRATG-RFRGTEPEPRDGIEPGHIPG--TVNIPFTDFLSQEGLEKSPEEIRHLFQEKKVDL 253 (302)
T ss_dssp ECHHHHHHHHHHCCSEEEECSCHH-HHHTSSCCSSTTCCCCCCTT--CEECCGGGGBCSSSCBCCHHHHHHHHHHTTCCT
T ss_pred ecHHHHHHhhcCCCcEEEecCCHH-HccccccCCCcCCcCccCCC--ceecCHHHhcCCCCccCCHHHHHHHHHhcCCCC
Confidence 466777555444444899999875 110 00000000011223 3567764221 234556655544322245
Q ss_pred CCcEEEeCccCCchHHHHHHHHHHhcCC
Q 002281 347 KKPLYLHSKEGVWRTYAMVSRWRQYMAR 374 (943)
Q Consensus 347 ~~PVLVHC~AGKDRTGALvaLlr~~lGv 374 (943)
++||++||.+|. |+..++..+ ..+|.
T Consensus 254 ~~~iv~yC~sG~-rs~~a~~~L-~~~G~ 279 (302)
T 3olh_A 254 SKPLVATCGSGV-TACHVALGA-YLCGK 279 (302)
T ss_dssp TSCEEEECSSSS-TTHHHHHHH-HTTTC
T ss_pred CCCEEEECCChH-HHHHHHHHH-HHcCC
Confidence 689999999998 887555444 43564
No 113
>2k0z_A Uncharacterized protein HP1203; A/B domain, structural genomics, unknown function, PSI-2, PR structure initiative; NMR {Helicobacter pylori}
Probab=76.25 E-value=3.6 Score=37.14 Aligned_cols=61 Identities=26% Similarity=0.397 Sum_probs=34.9
Q ss_pred EEEEcCCCcccCcchhhhhHHhhhcCCcEEEEEecCCCCCCCHHHHHHHHHHHhcCCCCcEEEeCccCCchHHHHHHHHH
Q 002281 290 TIVDIRAERVKDNFYEAAIDDAILSGKVELIKIPVEVRTAPTMEQVEKFASLVSNSSKKPLYLHSKEGVWRTYAMVSRWR 369 (943)
Q Consensus 290 TVIDLRse~~ee~~~~a~e~e~~e~~GI~yIhIPV~d~~~Ps~E~v~aFlelL~ds~~~PVLVHC~AGKDRTGALvaLlr 369 (943)
.|||.|+.. + |. .-...| -+++|+.. +........-..+.||+++|..|. |+..++..++
T Consensus 18 ~liDvR~~~-e---~~-----~ghIpg--Ai~ip~~~--------l~~~~~~~~~~~~~~ivvyC~~G~-rs~~aa~~L~ 77 (110)
T 2k0z_A 18 IVVDVRELD-E---YE-----ELHLPN--ATLISVND--------QEKLADFLSQHKDKKVLLHCRAGR-RALDAAKSMH 77 (110)
T ss_dssp EEEEEECHH-H---HH-----HSBCTT--EEEEETTC--------HHHHHHHHHSCSSSCEEEECSSSH-HHHHHHHHHH
T ss_pred EEEECCCHH-H---Hh-----cCcCCC--CEEcCHHH--------HHHHHHhcccCCCCEEEEEeCCCc-hHHHHHHHHH
Confidence 799999864 1 11 112233 36788762 111111111245789999999996 8775555554
Q ss_pred H
Q 002281 370 Q 370 (943)
Q Consensus 370 ~ 370 (943)
.
T Consensus 78 ~ 78 (110)
T 2k0z_A 78 E 78 (110)
T ss_dssp H
T ss_pred H
Confidence 3
No 114
>3f4a_A Uncharacterized protein YGR203W; protein phosphatase, rhodanese-like family, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.80A {Saccharomyces cerevisiae} PDB: 3fs5_A*
Probab=74.72 E-value=3.9 Score=40.28 Aligned_cols=84 Identities=12% Similarity=0.055 Sum_probs=45.2
Q ss_pred CCCHhhHHHHHHcCC-------cEEEEcCCCcccCcchhhhhHHhhhcCCcEEEEEecCCCCCCCHHHHHHHHHHHhc--
Q 002281 274 QVTEEGLKWLMEKGY-------KTIVDIRAERVKDNFYEAAIDDAILSGKVELIKIPVEVRTAPTMEQVEKFASLVSN-- 344 (943)
Q Consensus 274 qpT~eDLa~Lk~lGI-------KTVIDLRse~~ee~~~~a~e~e~~e~~GI~yIhIPV~d~~~Ps~E~v~aFlelL~d-- 344 (943)
.++++++..+.+.+- -.|||.|. . + |. .-...|. +++|+..... ....+.++...+.+
T Consensus 32 ~Is~~eL~~~l~~~~~~~~~~~~~iIDVR~-~-E---y~-----~GHIpGA--iniP~~~l~~-~~~~l~~l~~~~~~~~ 98 (169)
T 3f4a_A 32 YLDPTELHRWMQEGHTTTLREPFQVVDVRG-S-D---YM-----GGHIKDG--WHYAYSRLKQ-DPEYLRELKHRLLEKQ 98 (169)
T ss_dssp EECHHHHHHHHHHTSCTTTCCCEEEEECCS-T-T---CT-----TCEETTC--EECCHHHHHH-CHHHHHHHHHHHHHHH
T ss_pred EeCHHHHHHHHhcCCccCcCCCEEEEECCc-h-H---Hc-----cCcCCCC--EECCHHHhhc-ccccHHHHHHHHHhhc
Confidence 368888888776654 57999998 4 2 11 0112232 4566542111 11123333332211
Q ss_pred ---CCCCcEEEeCccCCchHHHHHHHHHH
Q 002281 345 ---SSKKPLYLHSKEGVWRTYAMVSRWRQ 370 (943)
Q Consensus 345 ---s~~~PVLVHC~AGKDRTGALvaLlr~ 370 (943)
....||+|||..|..|....+..++.
T Consensus 99 ~~~~~~~~IVvyC~sG~~Rs~~aa~~l~~ 127 (169)
T 3f4a_A 99 ADGRGALNVIFHCMLSQQRGPSAAMLLLR 127 (169)
T ss_dssp HTSSSCEEEEEECSSSSSHHHHHHHHHHH
T ss_pred ccccCCCeEEEEeCCCCCcHHHHHHHHHH
Confidence 12369999999996687655444433
No 115
>3aay_A Putative thiosulfate sulfurtransferase; sulfurtranserase, structural genomics, PSI, structure initiative; 1.90A {Mycobacterium tuberculosis} PDB: 3aax_A 3hwi_A
Probab=74.33 E-value=7.6 Score=40.21 Aligned_cols=83 Identities=14% Similarity=0.113 Sum_probs=46.3
Q ss_pred CCHhhHHHHHHcCCcEEEEcCC-CcccCcchhhhhHHhhhcCCcEEEEEecCC-------CCCCCHHHHHHHHHHHhcCC
Q 002281 275 VTEEGLKWLMEKGYKTIVDIRA-ERVKDNFYEAAIDDAILSGKVELIKIPVEV-------RTAPTMEQVEKFASLVSNSS 346 (943)
Q Consensus 275 pT~eDLa~Lk~lGIKTVIDLRs-e~~ee~~~~a~e~e~~e~~GI~yIhIPV~d-------~~~Ps~E~v~aFlelL~ds~ 346 (943)
++++++..+.+.+=-.|||.|+ .. + | ......|. +++|+.. ...++.+.+.+.+..+--..
T Consensus 8 is~~~l~~~l~~~~~~liDvR~~~~-e---y-----~~ghIpgA--~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~ 76 (277)
T 3aay_A 8 VSADWAESNLHAPKVVFVEVDEDTS-A---Y-----DRDHIAGA--IKLDWRTDLQDPVKRDFVDAQQFSKLLSERGIAN 76 (277)
T ss_dssp ECHHHHHTTTTCTTEEEEEEESSSH-H---H-----HHCBSTTC--EEEETTTTTBCSSSSSBCCHHHHHHHHHHHTCCT
T ss_pred EcHHHHHHHhCCCCEEEEEcCCChh-h---H-----hhCCCCCc--EEecccccccCCCCCCCCCHHHHHHHHHHcCCCC
Confidence 4566655544333247999997 33 1 2 11223344 4677652 12345667776665542245
Q ss_pred CCcEEEeCccCCchHHHHHHHH
Q 002281 347 KKPLYLHSKEGVWRTYAMVSRW 368 (943)
Q Consensus 347 ~~PVLVHC~AGKDRTGALvaLl 368 (943)
+.+|+|+|..|..|+..++.++
T Consensus 77 ~~~vvvyc~~g~~~s~~a~~~L 98 (277)
T 3aay_A 77 EDTVILYGGNNNWFAAYAYWYF 98 (277)
T ss_dssp TSEEEEECSGGGHHHHHHHHHH
T ss_pred CCeEEEECCCCCchHHHHHHHH
Confidence 6799999999864555444333
No 116
>1zxx_A 6-phosphofructokinase; allosteric regulation, lactobacillus BU transferase; 1.85A {Lactobacillus delbrueckii subsp}
Probab=73.65 E-value=1.7 Score=47.60 Aligned_cols=43 Identities=26% Similarity=0.282 Sum_probs=32.6
Q ss_pred cCccEEEEEcCCchHHHHhhhccCCCCcEEEEeC----------CCCcccCCCC
Q 002281 754 ERVDFVACLGGDGVILHASNLFRGAVPPVISFNL----------GSLGFLTSHP 797 (943)
Q Consensus 754 ~~~DlVIvLGGDGTiL~Aar~~~~~~~PVLGIN~----------GsLGFLt~~~ 797 (943)
.++|.+|++|||||+-.|..+. ...+||+||-- =++||-|..+
T Consensus 92 ~~Id~LvvIGGdgS~~~a~~L~-~~~i~vvgiPkTIDNDl~~td~t~GfdTA~~ 144 (319)
T 1zxx_A 92 HGIDAVVVIGGDGSYHGALQLT-RHGFNSIGLPGTIDNDIPYTDATIGYDTACM 144 (319)
T ss_dssp TTCCEEEEEECHHHHHHHHHHH-HTTCCEEEEEEETTCCCTTCSCCEEHHHHHH
T ss_pred hCCCEEEEECCchHHHHHHHHH-HhCCCEEEEeecccCCCCCCcCCCCHHHHHH
Confidence 4799999999999987766654 45799999842 2678877543
No 117
>1pfk_A Phosphofructokinase; transferase(phosphotransferase); HET: FBP ADP; 2.40A {Escherichia coli} SCOP: c.89.1.1 PDB: 2pfk_A
Probab=73.51 E-value=1.8 Score=47.58 Aligned_cols=52 Identities=25% Similarity=0.448 Sum_probs=36.4
Q ss_pred cCccEEEEEcCCchHHHHhhhccCCCCcEEEEeC-------C---CCcccCCCCchhHHHHHHHH
Q 002281 754 ERVDFVACLGGDGVILHASNLFRGAVPPVISFNL-------G---SLGFLTSHPFEDYRQDLRQV 808 (943)
Q Consensus 754 ~~~DlVIvLGGDGTiL~Aar~~~~~~~PVLGIN~-------G---sLGFLt~~~~ed~~~~L~~l 808 (943)
.++|.+|++|||||+-.|..+. ...+||+||-- | ++||-|..+ .+.++++++
T Consensus 93 ~~Id~LvvIGGdgS~~~a~~L~-~~~i~vvgiPkTIDNDl~~td~t~GfdTA~~--~~~~aid~i 154 (320)
T 1pfk_A 93 RGIDALVVIGGDGSYMGAMRLT-EMGFPCIGLPGTIDNDIKGTDYTIGFFTALS--TVVEAIDRL 154 (320)
T ss_dssp TTCCEEEEEECHHHHHHHHHHH-HTTCCEEEEEBCTTCCCTTCSCCBTHHHHHH--HHHHHHHHH
T ss_pred cCCCEEEEECCCchHHHHHHHH-hhCCCEEEEeccccCCCCCCcCCCCHHHHHH--HHHHHHHHH
Confidence 4799999999999987766654 45799999943 2 678877543 233444443
No 118
>3g5j_A Putative ATP/GTP binding protein; N-terminal domain of ATP/GTP binding protein, PSI, MCSG, STR genomics, protein structure initiative; HET: PGE; 1.76A {Clostridium difficile}
Probab=73.33 E-value=3.3 Score=37.76 Aligned_cols=25 Identities=12% Similarity=0.276 Sum_probs=17.5
Q ss_pred CcEEEeC-ccCCchHHHHHHHHHHhcCC
Q 002281 348 KPLYLHS-KEGVWRTYAMVSRWRQYMAR 374 (943)
Q Consensus 348 ~PVLVHC-~AGKDRTGALvaLlr~~lGv 374 (943)
.||+++| ..|. |+..++..++. +|.
T Consensus 90 ~~ivvyC~~~G~-rs~~a~~~L~~-~G~ 115 (134)
T 3g5j_A 90 DNIVIYCARGGM-RSGSIVNLLSS-LGV 115 (134)
T ss_dssp SEEEEECSSSSH-HHHHHHHHHHH-TTC
T ss_pred CeEEEEECCCCh-HHHHHHHHHHH-cCC
Confidence 7999999 5776 87766555544 453
No 119
>3eme_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics; 2.00A {Staphylococcus aureus subsp} PDB: 3iwh_A 3mzz_A
Probab=72.63 E-value=1.1 Score=39.96 Aligned_cols=73 Identities=21% Similarity=0.239 Sum_probs=41.1
Q ss_pred CCHhhHHHHH-HcCCcEEEEcCCCcccCcchhhhhHHhhhcCCcEEEEEecCCCCCCCHHHHHHHHHHHhcCCCCcEEEe
Q 002281 275 VTEEGLKWLM-EKGYKTIVDIRAERVKDNFYEAAIDDAILSGKVELIKIPVEVRTAPTMEQVEKFASLVSNSSKKPLYLH 353 (943)
Q Consensus 275 pT~eDLa~Lk-~lGIKTVIDLRse~~ee~~~~a~e~e~~e~~GI~yIhIPV~d~~~Ps~E~v~aFlelL~ds~~~PVLVH 353 (943)
++++++..+. +.+=-.|||.|++. + |. .-...| -+++|+... ...+.-+ ..+.||+++
T Consensus 4 is~~el~~~l~~~~~~~liDvR~~~-e---~~-----~ghIpg--A~~ip~~~l--------~~~~~~l--~~~~~iv~y 62 (103)
T 3eme_A 4 ITTDELKNKLLESKPVQIVDVRTDE-E---TA-----MGYIPN--AKLIPMDTI--------PDNLNSF--NKNEIYYIV 62 (103)
T ss_dssp ECHHHHHHGGGSSSCCEEEECSCHH-H---HT-----TCBCTT--CEECCGGGG--------GGCGGGC--CTTSEEEEE
T ss_pred cCHHHHHHHHhcCCCCEEEECCCHH-H---Hh-----cCcCCC--CEEcCHHHH--------HHHHHhC--CCCCeEEEE
Confidence 4667766644 33445799999875 1 10 011223 256776521 1111112 356799999
Q ss_pred CccCCchHHHHHHHHH
Q 002281 354 SKEGVWRTYAMVSRWR 369 (943)
Q Consensus 354 C~AGKDRTGALvaLlr 369 (943)
|..|. |+..++..++
T Consensus 63 C~~g~-rs~~a~~~L~ 77 (103)
T 3eme_A 63 CAGGV-RSAKVVEYLE 77 (103)
T ss_dssp CSSSS-HHHHHHHHHH
T ss_pred CCCCh-HHHHHHHHHH
Confidence 99996 8776555554
No 120
>3ilm_A ALR3790 protein; rhodanese-like, NSR437H, NESG, structural genomics, protein structure initiative, northeast structural genomics consortium; 2.26A {Nostoc SP} PDB: 2kl3_A
Probab=71.68 E-value=5.9 Score=37.62 Aligned_cols=77 Identities=22% Similarity=0.232 Sum_probs=44.1
Q ss_pred CCHhhHHHHHHcCC--cEEEEcCCCcccCcchhhhhHHhhhcCCcEEEEEecCCCCCCCHHHHHHHH-HHHhcCCCCcEE
Q 002281 275 VTEEGLKWLMEKGY--KTIVDIRAERVKDNFYEAAIDDAILSGKVELIKIPVEVRTAPTMEQVEKFA-SLVSNSSKKPLY 351 (943)
Q Consensus 275 pT~eDLa~Lk~lGI--KTVIDLRse~~ee~~~~a~e~e~~e~~GI~yIhIPV~d~~~Ps~E~v~aFl-elL~ds~~~PVL 351 (943)
++++++..+.+.|= -.|||.|+.. + |. .-...|. +++|+. .+.... ..+ ..+.||+
T Consensus 2 Is~~el~~~l~~~~~~~~liDvR~~~-e---~~-----~ghIpgA--i~ip~~--------~l~~~~~~~l--~~~~~iv 60 (141)
T 3ilm_A 2 SDAHVLKSRLEWGEPAFTILDVRDRS-T---YN-----DGHIMGA--MAMPIE--------DLVDRASSSL--EKSRDIY 60 (141)
T ss_dssp CCHHHHHHHHHHSCSCEEEEECSCHH-H---HH-----HCEETTC--EECCGG--------GHHHHHHTTS--CTTSEEE
T ss_pred CCHHHHHHHHhcCCCCEEEEECCCHH-H---Hh-----CCCCCCC--EEcCHH--------HHHHHHHhcC--CCCCeEE
Confidence 57788877766554 4799999864 1 11 1122232 456664 122221 122 3467999
Q ss_pred EeCccCCchHHHHHHHHHHhcCC
Q 002281 352 LHSKEGVWRTYAMVSRWRQYMAR 374 (943)
Q Consensus 352 VHC~AGKDRTGALvaLlr~~lGv 374 (943)
++|..|. |+..++.+++. +|.
T Consensus 61 vyC~~g~-rs~~aa~~L~~-~G~ 81 (141)
T 3ilm_A 61 VYGAGDE-QTSQAVNLLRS-AGF 81 (141)
T ss_dssp EECSSHH-HHHHHHHHHHH-TTC
T ss_pred EEECCCh-HHHHHHHHHHH-cCC
Confidence 9999986 77755554433 454
No 121
>3foj_A Uncharacterized protein; protein SSP1007, structural genomics, PSI-2, protein structure initiative; 1.60A {Staphylococcus saprophyticus subsp}
Probab=71.58 E-value=0.96 Score=40.11 Aligned_cols=73 Identities=19% Similarity=0.208 Sum_probs=40.6
Q ss_pred CCHhhHHHHHH-cCCcEEEEcCCCcccCcchhhhhHHhhhcCCcEEEEEecCCCCCCCHHHHHHHHHHHhcCCCCcEEEe
Q 002281 275 VTEEGLKWLME-KGYKTIVDIRAERVKDNFYEAAIDDAILSGKVELIKIPVEVRTAPTMEQVEKFASLVSNSSKKPLYLH 353 (943)
Q Consensus 275 pT~eDLa~Lk~-lGIKTVIDLRse~~ee~~~~a~e~e~~e~~GI~yIhIPV~d~~~Ps~E~v~aFlelL~ds~~~PVLVH 353 (943)
++++++..+.+ ..=-.|||.|++. + |. .-...| -+++|+... ...+.-+ ..+.|++++
T Consensus 4 is~~el~~~l~~~~~~~liDvR~~~-e---~~-----~ghIpg--A~~ip~~~l--------~~~~~~l--~~~~~ivvy 62 (100)
T 3foj_A 4 ITVTELKEKILDANPVNIVDVRTDQ-E---TA-----MGIIPG--AETIPMNSI--------PDNLNYF--NDNETYYII 62 (100)
T ss_dssp ECHHHHHHGGGSSSCCEEEECSCHH-H---HT-----TCBCTT--CEECCGGGG--------GGCGGGS--CTTSEEEEE
T ss_pred cCHHHHHHHHhcCCCcEEEECCCHH-H---Hh-----cCcCCC--CEECCHHHH--------HHHHHhC--CCCCcEEEE
Confidence 46677666543 3345799999875 1 10 011223 256776521 1111112 346799999
Q ss_pred CccCCchHHHHHHHHH
Q 002281 354 SKEGVWRTYAMVSRWR 369 (943)
Q Consensus 354 C~AGKDRTGALvaLlr 369 (943)
|..|. |+..++..++
T Consensus 63 C~~g~-rs~~a~~~L~ 77 (100)
T 3foj_A 63 CKAGG-RSAQVVQYLE 77 (100)
T ss_dssp CSSSH-HHHHHHHHHH
T ss_pred cCCCc-hHHHHHHHHH
Confidence 99996 7765555543
No 122
>1e0c_A Rhodanese, sulfurtransferase; sulfur metabolism, thiosulfate:cyanide sulfurtransferase; 1.8A {Azotobacter vinelandii} SCOP: c.46.1.2 c.46.1.2 PDB: 1h4k_X 1h4m_X
Probab=71.04 E-value=4.5 Score=41.76 Aligned_cols=95 Identities=8% Similarity=-0.033 Sum_probs=48.2
Q ss_pred CCHhhHHHHHHcCCcEEEEcCCCcccCcchhhhhHHhhhcCCcEEEEEecCCCCCC-----CHHHHHHHHHHHhcCCCCc
Q 002281 275 VTEEGLKWLMEKGYKTIVDIRAERVKDNFYEAAIDDAILSGKVELIKIPVEVRTAP-----TMEQVEKFASLVSNSSKKP 349 (943)
Q Consensus 275 pT~eDLa~Lk~lGIKTVIDLRse~~ee~~~~a~e~e~~e~~GI~yIhIPV~d~~~P-----s~E~v~aFlelL~ds~~~P 349 (943)
++.+++..+.+.+=-.|||.|+.. +...........-...|. +++|+...... ..+.+.+.+.-..-..++|
T Consensus 149 i~~~~l~~~l~~~~~~liDvR~~~-e~~g~~~~~~~~ghIpgA--~~ip~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 225 (271)
T 1e0c_A 149 ASRDYLLGRLGAADLAIWDARSPQ-EYRGEKVLAAKGGHIPGA--VNFEWTAAMDPSRALRIRTDIAGRLEELGITPDKE 225 (271)
T ss_dssp CCHHHHHHHTTCTTEEEEECSCHH-HHTTSSCCSSSCSBCTTC--EECCGGGGEEGGGTTEECTTHHHHHHHTTCCTTSE
T ss_pred ccHHHHHHHhcCCCcEEEEcCChh-hcCCccCCCCcCCcCCCc--eeccHHHhCCCCCCCCCHHHHHHHHHHcCCCCCCC
Confidence 577777666544435799999875 111000000000112232 56776532111 1133444333221245789
Q ss_pred EEEeCccCCchHHHHHHHHHHhcCC
Q 002281 350 LYLHSKEGVWRTYAMVSRWRQYMAR 374 (943)
Q Consensus 350 VLVHC~AGKDRTGALvaLlr~~lGv 374 (943)
|++||..|. |+..++..++ .+|.
T Consensus 226 ivvyC~~G~-rs~~a~~~L~-~~G~ 248 (271)
T 1e0c_A 226 IVTHCQTHH-RSGLTYLIAK-ALGY 248 (271)
T ss_dssp EEEECSSSS-HHHHHHHHHH-HTTC
T ss_pred EEEECCchH-HHHHHHHHHH-HcCC
Confidence 999999997 8776555554 3564
No 123
>2yf0_A Myotubularin-related protein 6; hydrolase; 2.65A {Homo sapiens}
Probab=70.63 E-value=3.9 Score=47.64 Aligned_cols=26 Identities=19% Similarity=0.158 Sum_probs=22.1
Q ss_pred CCCCcEEEeCccCCchHHHHHHHHHH
Q 002281 345 SSKKPLYLHSKEGVWRTYAMVSRWRQ 370 (943)
Q Consensus 345 s~~~PVLVHC~AGKDRTGALvaLlr~ 370 (943)
..+.+|||||..|.|||..+.+|...
T Consensus 327 ~~g~sVLVhcsDGwDrT~ql~SLaql 352 (512)
T 2yf0_A 327 VENASVLVHCSDGWDRTSQVCSLGSL 352 (512)
T ss_dssp TTCCCEEECTTTSSSHHHHHHHHHHH
T ss_pred hCCCeEEEECCCCccccHHHHHHHHH
Confidence 45779999999999999977777655
No 124
>1zsq_A Myotubularin-related protein 2; protein-phospholipid complex, hydrolase; HET: PIB; 1.82A {Homo sapiens} SCOP: b.55.1.8 c.45.1.3 PDB: 1zvr_A*
Probab=70.35 E-value=4.1 Score=47.63 Aligned_cols=26 Identities=31% Similarity=0.249 Sum_probs=21.8
Q ss_pred CCCCcEEEeCccCCchHHHHHHHHHH
Q 002281 345 SSKKPLYLHSKEGVWRTYAMVSRWRQ 370 (943)
Q Consensus 345 s~~~PVLVHC~AGKDRTGALvaLlr~ 370 (943)
..+.+|||||..|.|||..+.+|...
T Consensus 339 ~~~~sVLvhcsdGwDrT~ql~SLaql 364 (528)
T 1zsq_A 339 SGKTSVVVHSSDGWDRTAQLTSLAML 364 (528)
T ss_dssp TTCCCEEEECSSSSSHHHHHHHHHHH
T ss_pred cCCceEEEECCCCccchHHHHHHHHH
Confidence 44569999999999999988877755
No 125
>3hno_A Pyrophosphate-dependent phosphofructokinase; structural genomics, PSI-2, protein structure initiative; 2.00A {Nitrosospira multiformis atcc 25196} PDB: 3k2q_A
Probab=69.89 E-value=2.2 Score=48.51 Aligned_cols=44 Identities=14% Similarity=0.113 Sum_probs=33.4
Q ss_pred cCccEEEEEcCCchHHHHhhhcc-----CCCCcEEEEeC----------CCCcccCCCC
Q 002281 754 ERVDFVACLGGDGVILHASNLFR-----GAVPPVISFNL----------GSLGFLTSHP 797 (943)
Q Consensus 754 ~~~DlVIvLGGDGTiL~Aar~~~-----~~~~PVLGIN~----------GsLGFLt~~~ 797 (943)
.++|.+|+||||||+-.|..+.. +..+||+||-- -+.||-|..+
T Consensus 103 ~~Id~Lv~IGGdgS~~~A~~L~~~~~~~g~~i~vIGiPkTIDNDl~~tD~t~GFdTA~~ 161 (419)
T 3hno_A 103 HDIGYFFYNGGGDSADTCLKVSQLSGTLGYPIQAIHVPKTVDNDLPITDCCPGFGSVAK 161 (419)
T ss_dssp TTEEEEEEEESHHHHHHHHHHHHHHHHTTCCCEEEEEECCTTCCCSSSSSCTTHHHHHH
T ss_pred cCCCEEEEeCCchHHHHHHHHHHHHHHhCCCccEEEecccccCCCcCCCCCCCchHHHH
Confidence 37899999999999877766543 35689999943 2788877543
No 126
>3l7n_A Putative uncharacterized protein; glutamine amidotransferase, transferas; 2.70A {Streptococcus mutans}
Probab=69.43 E-value=4.5 Score=41.54 Aligned_cols=78 Identities=6% Similarity=0.031 Sum_probs=46.6
Q ss_pred EEEEEecCChhHHHHHHHHHHHHhcCCCeEEEEcCChhhhhhcCCCCccceeeeccCccccccCccEEEEEcCCch----
Q 002281 692 TVLVLKKPGPALMEEAKEVASFLYHQEKMNILVEPDVHDIFARIPGFGFVQTFYLQDTSDLHERVDFVACLGGDGV---- 767 (943)
Q Consensus 692 ~VlIv~K~~~~~~~~a~~l~~~L~~~~g~~V~ve~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~DlVIvLGGDGT---- 767 (943)
+|++|.....+... .+..||.+ .|+++.+-.-... +...+...++|.||+.||-++
T Consensus 2 ~i~vi~h~~~e~~g---~~~~~l~~-~g~~~~~~~~~~~----------------~~~p~~~~~~d~lii~GGp~~~~~~ 61 (236)
T 3l7n_A 2 RIHFILHETFEAPG---AYLAWAAL-RGHDVSMTKVYRY----------------EKLPKDIDDFDMLILMGGPQSPSST 61 (236)
T ss_dssp EEEEEECCTTSCCH---HHHHHHHH-TTCEEEEEEGGGT----------------CCCCSCGGGCSEEEECCCSSCTTCC
T ss_pred eEEEEeCCCCCCch---HHHHHHHH-CCCeEEEEeeeCC----------------CCCCCCccccCEEEECCCCCCcccc
Confidence 57888876644322 34566654 5777654222110 000111346899999999887
Q ss_pred -----------HHHHhhhccCCCCcEEEEeCCC
Q 002281 768 -----------ILHASNLFRGAVPPVISFNLGS 789 (943)
Q Consensus 768 -----------iL~Aar~~~~~~~PVLGIN~Gs 789 (943)
.+...+.+....+|||||-+|.
T Consensus 62 ~~~~~~~~~~~~~~~i~~~~~~~~PvLGIClG~ 94 (236)
T 3l7n_A 62 KKEFPYYDAQAEVKLIQKAAKSEKIIVGVCLGA 94 (236)
T ss_dssp TTTCTTCCHHHHHHHHHHHHHTTCEEEEETHHH
T ss_pred cccCcccchHHHHHHHHHHHHcCCCEEEEchHH
Confidence 3455555445679999999883
No 127
>1e0c_A Rhodanese, sulfurtransferase; sulfur metabolism, thiosulfate:cyanide sulfurtransferase; 1.8A {Azotobacter vinelandii} SCOP: c.46.1.2 c.46.1.2 PDB: 1h4k_X 1h4m_X
Probab=67.65 E-value=7.6 Score=40.07 Aligned_cols=85 Identities=12% Similarity=0.059 Sum_probs=49.0
Q ss_pred CCHhhHHHHHHcCCcEEEEcCCCcccCcchhhhhHHhhhcCCcEEEEEecCC---------CCCCCHHHHHHHHHHHhcC
Q 002281 275 VTEEGLKWLMEKGYKTIVDIRAERVKDNFYEAAIDDAILSGKVELIKIPVEV---------RTAPTMEQVEKFASLVSNS 345 (943)
Q Consensus 275 pT~eDLa~Lk~lGIKTVIDLRse~~ee~~~~a~e~e~~e~~GI~yIhIPV~d---------~~~Ps~E~v~aFlelL~ds 345 (943)
++++++..+.+..=-.|||.|+.. + |. .....|. +++|+.. ...|+.+.+.+.+..+--.
T Consensus 11 is~~~l~~~l~~~~~~iiDvR~~~-e---y~-----~ghIpgA--~~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~gi~ 79 (271)
T 1e0c_A 11 IEPADLQARLSAPELILVDLTSAA-R---YA-----EGHIPGA--RFVDPKRTQLGQPPAPGLQPPREQLESLFGELGHR 79 (271)
T ss_dssp ECHHHHHTTTTCTTEEEEECSCHH-H---HH-----HCBSTTC--EECCGGGGSCCCTTCTTSCCCHHHHHHHHHHHTCC
T ss_pred eeHHHHHHhccCCCeEEEEcCCcc-h---hh-----hCcCCCC--EECCHHHhccCCCCCCCCCCCHHHHHHHHHHcCCC
Confidence 466666555432213799999764 1 21 1122343 4566542 1235667777766654224
Q ss_pred CCCcEEEeCccCCchHHHHHHHHHH
Q 002281 346 SKKPLYLHSKEGVWRTYAMVSRWRQ 370 (943)
Q Consensus 346 ~~~PVLVHC~AGKDRTGALvaLlr~ 370 (943)
.+.+|+|+|..|..|+..++.+++.
T Consensus 80 ~~~~vvvyc~~g~~~s~~a~~~L~~ 104 (271)
T 1e0c_A 80 PEAVYVVYDDEGGGWAGRFIWLLDV 104 (271)
T ss_dssp TTCEEEEECSSSSHHHHHHHHHHHH
T ss_pred CCCeEEEEcCCCCccHHHHHHHHHH
Confidence 5789999999998677755555443
No 128
>2j6p_A SB(V)-AS(V) reductase; arsenate reductase, antimonate reductase, CDC25 phosphatase, rhodanese, C-MYC epitope, oxidoreductase; HET: EPE; 2.15A {Leishmania major}
Probab=67.15 E-value=24 Score=33.61 Aligned_cols=75 Identities=21% Similarity=0.207 Sum_probs=42.4
Q ss_pred CCHhhHHHHHHcC----CcEEEEcCCCcccCcchhhhhHHhhhcCCcEEEEEecCCCCCCCHHHHHHHHHHHhcCCCCcE
Q 002281 275 VTEEGLKWLMEKG----YKTIVDIRAERVKDNFYEAAIDDAILSGKVELIKIPVEVRTAPTMEQVEKFASLVSNSSKKPL 350 (943)
Q Consensus 275 pT~eDLa~Lk~lG----IKTVIDLRse~~ee~~~~a~e~e~~e~~GI~yIhIPV~d~~~Ps~E~v~aFlelL~ds~~~PV 350 (943)
++++++..+.+.+ =-.|||.|+++ |. .....|. +++|+... ....+..+...+.+....+|
T Consensus 7 Is~~el~~~l~~~~~~~~~~lIDvR~~e-----y~-----~gHIpGA--inip~~~l---~~~~~~~l~~~l~~~~~~~v 71 (152)
T 2j6p_A 7 IKPEELVELLDNPDSLVKAAVIDCRDSD-----RD-----CGFIVNS--INMPTISC---TEEMYEKLAKTLFEEKKELA 71 (152)
T ss_dssp ECHHHHHHHHHSHHHHHTEEEEECCSTT-----GG-----GCBCTTC--EECCTTTC---CHHHHHHHHHHHHHTTCCEE
T ss_pred cCHHHHHHHHhCCCCCCCEEEEEcCcHH-----hC-----cCcCCCc--EECChhHh---hHHHHHHHHHHhcccCCCEE
Confidence 5777777665542 23799999852 21 0122343 57777632 22234455555533334468
Q ss_pred EEeC-ccCCchHHHHH
Q 002281 351 YLHS-KEGVWRTYAMV 365 (943)
Q Consensus 351 LVHC-~AGKDRTGALv 365 (943)
++|| .+|. |+...+
T Consensus 72 V~yC~~sg~-rs~~aa 86 (152)
T 2j6p_A 72 VFHCAQSLV-RAPKGA 86 (152)
T ss_dssp EEECSSSSS-HHHHHH
T ss_pred EEEcCCCCC-ccHHHH
Confidence 8899 6777 876443
No 129
>1uar_A Rhodanese; sulfurtransferase, riken structural genomics/PROT initiative, RSGI, structural genomics, transferase; 1.70A {Thermus thermophilus} SCOP: c.46.1.2 c.46.1.2
Probab=67.13 E-value=6.4 Score=40.93 Aligned_cols=96 Identities=10% Similarity=0.029 Sum_probs=48.7
Q ss_pred CCHhhHHHHHH---cCCcEEEEcCCCcccCcch-hh-----hhH--HhhhcCCcEEEEEecCCCC-----CCCHHHHHHH
Q 002281 275 VTEEGLKWLME---KGYKTIVDIRAERVKDNFY-EA-----AID--DAILSGKVELIKIPVEVRT-----APTMEQVEKF 338 (943)
Q Consensus 275 pT~eDLa~Lk~---lGIKTVIDLRse~~ee~~~-~a-----~e~--e~~e~~GI~yIhIPV~d~~-----~Ps~E~v~aF 338 (943)
++.+++..+.+ .+=..|||.|+.. +.... .. ... ..-...|. +|+|+.... -++.+.+.+.
T Consensus 148 i~~~el~~~l~~~~~~~~~liDvR~~~-e~~g~~~~~~~~~~~~~~~~ghIpgA--~~ip~~~~~~~~~~~~~~~~l~~~ 224 (285)
T 1uar_A 148 AYRDDVLEHIIKVKEGKGALVDVRSPQ-EYRGELTHMPDYPQEGALRAGHIPGA--KNIPWAKAVNPDGTFKSAEELRAL 224 (285)
T ss_dssp ECHHHHHHHHHHHHTTSEEEEECSCHH-HHHTCC--------CCCSCCSBCTTC--EECCGGGGBCTTSCBCCHHHHHHH
T ss_pred EcHHHHHHHHhhcccCCCcEEEcCCcc-ceeeeccccccccccccccCCcCCCc--cccCHHHhcCCCCcCCCHHHHHHH
Confidence 57788776653 1223699999975 11000 00 000 00112232 567764321 2345555544
Q ss_pred HHHHhcCCCCcEEEeCccCCchHHHHHHHHHHhcCC
Q 002281 339 ASLVSNSSKKPLYLHSKEGVWRTYAMVSRWRQYMAR 374 (943)
Q Consensus 339 lelL~ds~~~PVLVHC~AGKDRTGALvaLlr~~lGv 374 (943)
+.-+.-..++||++||.+|. |+..++.+++..+|.
T Consensus 225 ~~~~g~~~~~~ivvyC~~G~-rs~~a~~~L~~~~G~ 259 (285)
T 1uar_A 225 YEPLGITKDKDIVVYCRIAE-RSSHSWFVLKYLLGY 259 (285)
T ss_dssp HGGGTCCTTSEEEEECSSHH-HHHHHHHHHHTTSCC
T ss_pred HHHcCCCCCCCEEEECCchH-HHHHHHHHHHHHcCC
Confidence 43311135689999999997 776554444414564
No 130
>4f67_A UPF0176 protein LPG2838; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium; 1.79A {Legionella pneumophila subsp}
Probab=66.12 E-value=3.8 Score=43.68 Aligned_cols=171 Identities=13% Similarity=0.132 Sum_probs=80.3
Q ss_pred ccCCchhhhhhhhhhhhhHHHHHHHhccCCCC-CchhhH-HHHHHHHhhh------cccCCCCCCCCCCCCcCCCCceee
Q 002281 180 DQLPPLAIFRSEMKRCCESMHIALENYLTPED-VRSLDV-WRKLQRLKNV------CYDSGFPRGDDYPIHTLFANWSPV 251 (943)
Q Consensus 180 ~~~p~l~l~r~~l~~~~~~l~~~l~~yl~p~~-~~sl~v-~rkLqr~~n~------~~d~g~pR~~g~p~~t~iaNwr~V 251 (943)
-.+++..-+|..+..+|+.+.+..-=|+.+++ -.++.. ...++++.+. +-|+.+-. ...+...+.-.+.-
T Consensus 24 ~~~~d~~~~~~~~~~~~~~~~~~G~i~~a~eGiN~t~~g~~~~~~~~~~~l~~~~~~~~~~~k~--s~~~~~~F~~l~vk 101 (265)
T 4f67_A 24 IPLNDFRSLREPILTKMHEIGIKGTIILAHEGVNGGFAGNREQMNVFYDYLRSDSRFADLHFKE--TYDNKNPFDKAKVK 101 (265)
T ss_dssp CCCTTHHHHHHHHHHHHHHHTCEEEEEEETTEEEEEEEECHHHHHHHHHHHTTSGGGTTCCCEE--EEESSCCCSSEEEE
T ss_pred ecCCCHHHHHHHHHHHHHHCCCeEEEEEcCccceEEEEeCHHHHHHHHHHHHhCCCCCCCceee--ccccCCCccccccc
Confidence 44567788899999999998776666888876 111111 1122232221 22222211 01111122111111
Q ss_pred eccC-CccccccCCCcceEEEcCCCCHhhHHHHHHcCCcEEEEcCCCcccCcchhhhhHHhhhcCCcEEEEEecCCCCCC
Q 002281 252 YLSN-SKDDIASKDSEVTFCRGGQVTEEGLKWLMEKGYKTIVDIRAERVKDNFYEAAIDDAILSGKVELIKIPVEVRTAP 330 (943)
Q Consensus 252 ~l~~-~~d~~~~~~~e~~LYRSGqpT~eDLa~Lk~lGIKTVIDLRse~~ee~~~~a~e~e~~e~~GI~yIhIPV~d~~~P 330 (943)
+.+ +.. .+.....+.--++-.++++++..+.+.+=-.|||.|++. + |. .-...|. +++|+....
T Consensus 102 -~k~eiV~-~g~~~~dp~~~~~~~Is~~el~~ll~~~~~vlIDVR~~~-E---y~-----~GHIpGA--iniP~~~~~-- 166 (265)
T 4f67_A 102 -LRKEIVT-MGVQKVDPSYNAGTYLSPEEWHQFIQDPNVILLDTRNDY-E---YE-----LGTFKNA--INPDIENFR-- 166 (265)
T ss_dssp -ECSSSSC-CCCTTCCCTTCTTCEECHHHHHHHTTCTTSEEEECSCHH-H---HH-----HEEETTC--BCCCCSSGG--
T ss_pred -ccccccc-CCCCCcCcccCCCceECHHHHHHHhcCCCeEEEEeCCch-H---hh-----cCcCCCC--EeCCHHHHH--
Confidence 111 000 000000000001224688888887666656899999864 1 11 1111221 344544211
Q ss_pred CHHHHHHHHHHHhcCCCCcEEEeCccCCchHHHHHHHHHH
Q 002281 331 TMEQVEKFASLVSNSSKKPLYLHSKEGVWRTYAMVSRWRQ 370 (943)
Q Consensus 331 s~E~v~aFlelL~ds~~~PVLVHC~AGKDRTGALvaLlr~ 370 (943)
+....+.+.+....++||+++|+.|. |+..++..++.
T Consensus 167 --~~~~~l~~~l~~~kdk~IVvyC~~G~-RS~~Aa~~L~~ 203 (265)
T 4f67_A 167 --EFPDYVQRNLIDKKDKKIAMFCTGGI-RCEKTTAYMKE 203 (265)
T ss_dssp --GHHHHHHHHTGGGTTSCEEEECSSSH-HHHHHHHHHHH
T ss_pred --hhHHHHHHhhhhCCCCeEEEEeCCCh-HHHHHHHHHHH
Confidence 11122222332345789999999998 87755555544
No 131
>1lw3_A Myotubularin-related protein 2; protein-phosphate complex, hydrolase; 2.30A {Homo sapiens} SCOP: b.55.1.8 c.45.1.3 PDB: 1m7r_A
Probab=65.98 E-value=5.5 Score=47.63 Aligned_cols=26 Identities=31% Similarity=0.249 Sum_probs=22.0
Q ss_pred CCCCcEEEeCccCCchHHHHHHHHHH
Q 002281 345 SSKKPLYLHSKEGVWRTYAMVSRWRQ 370 (943)
Q Consensus 345 s~~~PVLVHC~AGKDRTGALvaLlr~ 370 (943)
..+.+|||||..|.|||..+.+|...
T Consensus 411 ~~~~sVLVhcsDGwDrT~qlsSLaQL 436 (657)
T 1lw3_A 411 SGKTSVVVHSSDGWDRTAQLTSLAML 436 (657)
T ss_dssp TTCCCEEEECSSSSSHHHHHHHHHHH
T ss_pred cCCceEEEECCCCccchHHHHHHHHH
Confidence 44569999999999999988887755
No 132
>3bfj_A 1,3-propanediol oxidoreductase; opportunistic pathogens, decamer, structural genomics,struct proteomics in europe, spine; 2.70A {Klebsiella pneumoniae}
Probab=63.84 E-value=4.9 Score=44.32 Aligned_cols=88 Identities=16% Similarity=0.255 Sum_probs=50.4
Q ss_pred CCEEEEEecCChhHH--HHHHHHHHHHhcCCCeEEEEcCChhhhhhcCCCCccceeeeccCccc-cccCccEEEEEcCCc
Q 002281 690 PRTVLVLKKPGPALM--EEAKEVASFLYHQEKMNILVEPDVHDIFARIPGFGFVQTFYLQDTSD-LHERVDFVACLGGDG 766 (943)
Q Consensus 690 pk~VlIv~K~~~~~~--~~a~~l~~~L~~~~g~~V~ve~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~DlVIvLGGDG 766 (943)
.++++||....-... ....++.+.|.+ .|+++.+-+++. ..|....+... .+. ...++|+||.||| |
T Consensus 33 ~~~~livtd~~~~~~~~g~~~~v~~~L~~-~g~~~~~~~~~~----~~p~~~~v~~~----~~~~~~~~~d~IIavGG-G 102 (387)
T 3bfj_A 33 GKKALLVTDKGLRAIKDGAVDKTLHYLRE-AGIEVAIFDGVE----PNPKDTNVRDG----LAVFRREQCDIIVTVGG-G 102 (387)
T ss_dssp CSEEEEECCTTTC--CCSSHHHHHHHHHH-TTCEEEEECCCC----SSCBHHHHHHH----HHHHHHTTCCEEEEEES-H
T ss_pred CCEEEEEECcchhhccchHHHHHHHHHHH-cCCeEEEECCcc----CCCCHHHHHHH----HHHHHhcCCCEEEEeCC-c
Confidence 378999987653222 246677777754 477764422221 01111000000 011 1246899999999 9
Q ss_pred hHHHHhhhccC-------------------CCCcEEEEeC
Q 002281 767 VILHASNLFRG-------------------AVPPVISFNL 787 (943)
Q Consensus 767 TiL~Aar~~~~-------------------~~~PVLGIN~ 787 (943)
+++-+++...- ..+|++.|-+
T Consensus 103 sv~D~aK~iA~~~~~~~~~~d~~~~~~~~~~~~p~i~IPT 142 (387)
T 3bfj_A 103 SPHDCGKGIGIAATHEGDLYQYAGIETLTNPLPPIVAVNT 142 (387)
T ss_dssp HHHHHHHHHHHHHHSSSCSGGGCBSSCCCSCCCCEEEEEC
T ss_pred chhhHHHHHHHHHhCCCCHHHHhcccccCCCCCCEEEEeC
Confidence 99999886432 3678888875
No 133
>2hig_A 6-phospho-1-fructokinase; transferase; 2.40A {Trypanosoma brucei} PDB: 3f5m_A*
Probab=63.63 E-value=3 Score=48.26 Aligned_cols=52 Identities=25% Similarity=0.296 Sum_probs=36.5
Q ss_pred CccEEEEEcCCchHHHHhhhcc-----CCCCcEEEEeC-------C---CCcccCCCCchhHHHHHHHH
Q 002281 755 RVDFVACLGGDGVILHASNLFR-----GAVPPVISFNL-------G---SLGFLTSHPFEDYRQDLRQV 808 (943)
Q Consensus 755 ~~DlVIvLGGDGTiL~Aar~~~-----~~~~PVLGIN~-------G---sLGFLt~~~~ed~~~~L~~l 808 (943)
++|.+|+||||||+-.|..+.. +..+||+||-- | ++||-|..+ .+.++++++
T Consensus 189 ~Id~LvvIGGdgS~~~A~~L~e~~~~~g~~i~vVGIPkTIDNDl~gTD~T~GFdTAv~--~~~eaId~i 255 (487)
T 2hig_A 189 GVNILFTVGGDGTQRGALVISQEAKRRGVDISVFGVPKTIDNDLSFSHRTFGFQTAVE--KAVQAIRAA 255 (487)
T ss_dssp TCSEEEEEECHHHHHHHHHHHHHHHHHTCCCEEEEEECCTTSSCCCSSCCTTHHHHHH--HHHHHHHHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHHHhCCCceEEeccccccCCCCCCCCCCCHHHHHH--HHHHHHHHH
Confidence 7999999999999887766542 34689999953 2 788877543 333444444
No 134
>2f48_A Diphosphate--fructose-6-phosphate 1-phosphotransf; phosphotransfer, transferase; HET: FBP; 2.11A {Borrelia burgdorferi} SCOP: c.89.1.1 PDB: 1kzh_A*
Probab=61.90 E-value=3.4 Score=48.57 Aligned_cols=53 Identities=23% Similarity=0.328 Sum_probs=36.3
Q ss_pred cCccEEEEEcCCchHHHHhhhcc-----CCCCcEEEEeC-------C-----CCcccCCCCchhHHHHHHHH
Q 002281 754 ERVDFVACLGGDGVILHASNLFR-----GAVPPVISFNL-------G-----SLGFLTSHPFEDYRQDLRQV 808 (943)
Q Consensus 754 ~~~DlVIvLGGDGTiL~Aar~~~-----~~~~PVLGIN~-------G-----sLGFLt~~~~ed~~~~L~~l 808 (943)
-++|.+|+||||||+-.|..+.. +..+||+||-- | ++||-|..+ .+.++++++
T Consensus 165 ~~Id~LvvIGGdgS~~~A~~L~e~~~~~~~~i~vIGiPkTIDNDl~~t~id~tiGFdTA~~--~~~~aId~i 234 (555)
T 2f48_A 165 NNLNAIIIIGGDDSNTNAAILAEYFKKNGENIQVIGVPKTIDADLRNDHIEISFGFDSATK--IYSELIGNL 234 (555)
T ss_dssp TTCSEEEEEESHHHHHHHHHHHHHHHHTTCCCEEEEEEEETTCCCCCSSCCCCEEHHHHHH--HHHHHHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHHHhCCCCcEEEeccccCCCCCCCcCCCCCChhHHHH--HHHHHHHHH
Confidence 47999999999999877776543 24789999842 2 567766543 334455554
No 135
>1uar_A Rhodanese; sulfurtransferase, riken structural genomics/PROT initiative, RSGI, structural genomics, transferase; 1.70A {Thermus thermophilus} SCOP: c.46.1.2 c.46.1.2
Probab=61.35 E-value=11 Score=39.30 Aligned_cols=79 Identities=14% Similarity=0.123 Sum_probs=43.0
Q ss_pred CCHhhHHHHHHcCCcEEEEcCC-CcccCcchhhhhHHhhhcCCcEEEEEecCC-------CCCCCHHHHHHHHHHHhcCC
Q 002281 275 VTEEGLKWLMEKGYKTIVDIRA-ERVKDNFYEAAIDDAILSGKVELIKIPVEV-------RTAPTMEQVEKFASLVSNSS 346 (943)
Q Consensus 275 pT~eDLa~Lk~lGIKTVIDLRs-e~~ee~~~~a~e~e~~e~~GI~yIhIPV~d-------~~~Ps~E~v~aFlelL~ds~ 346 (943)
++++++..+.+.+=-.|||.|+ .. + |. .....|. +++|+.. ...++.+.+.+.+..+--..
T Consensus 10 is~~~l~~~l~~~~~~liDvR~~~~-e---~~-----~ghIpgA--~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~ 78 (285)
T 1uar_A 10 VSTDWVQEHLEDPKVRVLEVDEDIL-L---YD-----TGHIPGA--QKIDWQRDFWDPVVRDFISEEEFAKLMERLGISN 78 (285)
T ss_dssp ECHHHHHTTTTCTTEEEEEECSSTT-H---HH-----HCBCTTC--EEECHHHHHBCSSSSSBCCHHHHHHHHHHTTCCT
T ss_pred EcHHHHHHhcCCCCEEEEEcCCCcc-h---hh-----cCcCCCC--EECCchhhccCCcccCCCCHHHHHHHHHHcCCCC
Confidence 4666665554433246999994 33 1 11 1223343 4555431 22345666666655431245
Q ss_pred CCcEEEeCccCCchHHHH
Q 002281 347 KKPLYLHSKEGVWRTYAM 364 (943)
Q Consensus 347 ~~PVLVHC~AGKDRTGAL 364 (943)
+.||+++|..|.-|+..+
T Consensus 79 ~~~ivvyc~~g~~~s~~a 96 (285)
T 1uar_A 79 DTTVVLYGDKNNWWAAYA 96 (285)
T ss_dssp TCEEEEECHHHHHHHHHH
T ss_pred CCeEEEECCCCCccHHHH
Confidence 789999999987334433
No 136
>1vlj_A NADH-dependent butanol dehydrogenase; TM0820, structural G JCSG, protein structure initiative, PSI, joint center for S genomics; HET: NAP; 1.78A {Thermotoga maritima} SCOP: e.22.1.2
Probab=61.16 E-value=5.4 Score=44.45 Aligned_cols=87 Identities=20% Similarity=0.229 Sum_probs=49.3
Q ss_pred CEEEEEecCCh-hHHHHHHHHHHHHhcCCCeEEEEcCChhhhhhcCCCCccceeeeccCccc-cccCccEEEEEcCCchH
Q 002281 691 RTVLVLKKPGP-ALMEEAKEVASFLYHQEKMNILVEPDVHDIFARIPGFGFVQTFYLQDTSD-LHERVDFVACLGGDGVI 768 (943)
Q Consensus 691 k~VlIv~K~~~-~~~~~a~~l~~~L~~~~g~~V~ve~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~DlVIvLGGDGTi 768 (943)
++++||.-... .......++.+.|.+ .++++.+-+.+. ..|....+... .+. ...++|+||.||| |++
T Consensus 44 ~r~liVtd~~~~~~~g~~~~v~~~L~~-~g~~~~~f~~v~----~~p~~~~v~~~----~~~~~~~~~D~IIavGG-Gsv 113 (407)
T 1vlj_A 44 RKVLFLYGGGSIKKNGVYDQVVDSLKK-HGIEWVEVSGVK----PNPVLSKVHEA----VEVAKKEKVEAVLGVGG-GSV 113 (407)
T ss_dssp CEEEEEECSSHHHHSSHHHHHHHHHHH-TTCEEEEECCCC----SSCBHHHHHHH----HHHHHHTTCSEEEEEES-HHH
T ss_pred CeEEEEECchHHhhccHHHHHHHHHHH-cCCeEEEecCcc----CCCCHHHHHHH----HHHHHhcCCCEEEEeCC-hhH
Confidence 68999985332 111246677777754 466654322221 01111000000 011 1357899999999 999
Q ss_pred HHHhhhccC-------------------CCCcEEEEeC
Q 002281 769 LHASNLFRG-------------------AVPPVISFNL 787 (943)
Q Consensus 769 L~Aar~~~~-------------------~~~PVLGIN~ 787 (943)
+-+++...- ..+|++.|-+
T Consensus 114 iD~AK~iA~~~~~~~~~~d~~~~~~~~~~~~p~i~IPT 151 (407)
T 1vlj_A 114 VDSAKAVAAGALYEGDIWDAFIGKYQIEKALPIFDVLT 151 (407)
T ss_dssp HHHHHHHHHHTTCSSCGGGGGGTSCCCCCCCCEEEEEC
T ss_pred HHHHHHHHHHHhCCCCHHHHhcccccCCCCCCEEEEeC
Confidence 999886532 4678888875
No 137
>3lua_A Response regulator receiver protein; two-component signal transduction system, histidine kinase, phosphorelay, receiver domain, nysgxrc; 2.40A {Clostridium thermocellum}
Probab=60.48 E-value=43 Score=29.77 Aligned_cols=103 Identities=14% Similarity=0.183 Sum_probs=59.5
Q ss_pred CCEEEEEecCChhHHHHHHHHHHHHhcCCCeEEEEcCChhhhhhcCCCCccceeeeccCccccc-cCccEEEEE-----c
Q 002281 690 PRTVLVLKKPGPALMEEAKEVASFLYHQEKMNILVEPDVHDIFARIPGFGFVQTFYLQDTSDLH-ERVDFVACL-----G 763 (943)
Q Consensus 690 pk~VlIv~K~~~~~~~~a~~l~~~L~~~~g~~V~ve~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~DlVIvL-----G 763 (943)
..+|+||-... .. ...+..+|.+..+++|..-.+..+.+..+. . ..+|+||+= |
T Consensus 4 ~~~ilivdd~~-~~---~~~l~~~L~~~~~~~v~~~~~~~~a~~~l~----------------~~~~~dlvi~D~~l~~~ 63 (140)
T 3lua_A 4 DGTVLLIDYFE-YE---REKTKIIFDNIGEYDFIEVENLKKFYSIFK----------------DLDSITLIIMDIAFPVE 63 (140)
T ss_dssp CCEEEEECSCH-HH---HHHHHHHHHHHCCCEEEEECSHHHHHTTTT----------------TCCCCSEEEECSCSSSH
T ss_pred CCeEEEEeCCH-HH---HHHHHHHHHhccCccEEEECCHHHHHHHHh----------------cCCCCcEEEEeCCCCCC
Confidence 45788875432 22 223444444324788876555544432111 1 357888862 4
Q ss_pred CCc-hHHHHhhhc-cCCCCcEEEEe-------------CCCCcccC-CCCchhHHHHHHHHHcCC
Q 002281 764 GDG-VILHASNLF-RGAVPPVISFN-------------LGSLGFLT-SHPFEDYRQDLRQVIYGN 812 (943)
Q Consensus 764 GDG-TiL~Aar~~-~~~~~PVLGIN-------------~GsLGFLt-~~~~ed~~~~L~~ll~G~ 812 (943)
.|| .+++..+.. ....+||+-+. .|-.+||. +++.+++...+++++++.
T Consensus 64 ~~g~~~~~~l~~~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~i~~~~~~~ 128 (140)
T 3lua_A 64 KEGLEVLSAIRNNSRTANTPVIIATKSDNPGYRHAALKFKVSDYILKPYPTKRLENSVRSVLKIC 128 (140)
T ss_dssp HHHHHHHHHHHHSGGGTTCCEEEEESCCCHHHHHHHHHSCCSEEEESSCCTTHHHHHHHHHHCC-
T ss_pred CcHHHHHHHHHhCcccCCCCEEEEeCCCCHHHHHHHHHcCCCEEEECCCCHHHHHHHHHHHHHhc
Confidence 455 244444441 13467887664 26677777 578899999999999876
No 138
>1oi4_A Hypothetical protein YHBO; PFPI/THIJ family, complete proteome, PFPI, THIJ, bacterial targets at IGS-CNRS, france, BIGS, structural genomics; 2.03A {Escherichia coli} SCOP: c.23.16.2
Probab=60.43 E-value=22 Score=35.08 Aligned_cols=103 Identities=14% Similarity=0.074 Sum_probs=52.7
Q ss_pred hccc-ccCCCEEEEEecCChhHHHHHHHHHHHHhcCCCeEEEEcCChhhh-hhcCCCCccceeeeccCcccc-ccCccEE
Q 002281 683 MLMW-KTTPRTVLVLKKPGPALMEEAKEVASFLYHQEKMNILVEPDVHDI-FARIPGFGFVQTFYLQDTSDL-HERVDFV 759 (943)
Q Consensus 683 ~l~w-~~~pk~VlIv~K~~~~~~~~a~~l~~~L~~~~g~~V~ve~~~~~~-~~~~~~~~~~~~~~~~~~~~l-~~~~DlV 759 (943)
.+.| ..++++|+|+.-++-+..+.+ ...+.|.. .|++|.+-...... +....+...+.. ....++. ...+|.|
T Consensus 15 ~~~~~~~~~~kV~ill~~g~~~~e~~-~~~~~l~~-ag~~v~~vs~~~~~~v~~~~g~~~v~~--~~~l~~~~~~~~D~l 90 (193)
T 1oi4_A 15 SLYKKAGLSKKIAVLITDEFEDSEFT-SPADEFRK-AGHEVITIEKQAGKTVKGKKGEASVTI--DKSIDEVTPAEFDAL 90 (193)
T ss_dssp CTTTTTTCCCEEEEECCTTBCTHHHH-HHHHHHHH-TTCEEEEEESSTTCEEECTTSSCEEEC--CEEGGGCCGGGCSEE
T ss_pred ceehhhccCCEEEEEECCCCCHHHHH-HHHHHHHH-CCCEEEEEECCCCcceecCCCCeEEEC--CCChHHCCcccCCEE
Confidence 3556 335678999987764443332 23444433 35655432211110 111111100100 0111222 2468999
Q ss_pred EEEcCCch--------HHHHhhhccCCCCcEEEEeCCC
Q 002281 760 ACLGGDGV--------ILHASNLFRGAVPPVISFNLGS 789 (943)
Q Consensus 760 IvLGGDGT--------iL~Aar~~~~~~~PVLGIN~Gs 789 (943)
|+.||.|+ ++...+.+.....||.||-.|.
T Consensus 91 ivpGG~~~~~l~~~~~l~~~l~~~~~~gk~i~aIC~G~ 128 (193)
T 1oi4_A 91 LLPGGHSPDYLRGDNRFVTFTRDFVNSGKPVFAICHGP 128 (193)
T ss_dssp EECCBTHHHHHTTSHHHHHHHHHHHHTTCCEEEETTTH
T ss_pred EECCCcCHHHhhhCHHHHHHHHHHHHcCCEEEEECHHH
Confidence 99999553 4445555555678999999885
No 139
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=60.20 E-value=44 Score=30.57 Aligned_cols=103 Identities=14% Similarity=0.141 Sum_probs=61.4
Q ss_pred CCCEEEEEecCChhHHHHHHHHHHHHhcCCCeEEEEcCChhhhhhcCCCCccceeeeccCccccccCccEEEEE----cC
Q 002281 689 TPRTVLVLKKPGPALMEEAKEVASFLYHQEKMNILVEPDVHDIFARIPGFGFVQTFYLQDTSDLHERVDFVACL----GG 764 (943)
Q Consensus 689 ~pk~VlIv~K~~~~~~~~a~~l~~~L~~~~g~~V~ve~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~DlVIvL----GG 764 (943)
++.+|+||-... .. ...+..+|. ..|++|..-.+..+.+..+. ...+|+||+= |.
T Consensus 6 ~~~~ILivdd~~-~~---~~~l~~~L~-~~g~~v~~~~~~~~al~~l~----------------~~~~dlii~D~~l~~~ 64 (154)
T 3gt7_A 6 RAGEILIVEDSP-TQ---AEHLKHILE-ETGYQTEHVRNGREAVRFLS----------------LTRPDLIISDVLMPEM 64 (154)
T ss_dssp -CCEEEEECSCH-HH---HHHHHHHHH-TTTCEEEEESSHHHHHHHHT----------------TCCCSEEEEESCCSSS
T ss_pred CCCcEEEEeCCH-HH---HHHHHHHHH-HCCCEEEEeCCHHHHHHHHH----------------hCCCCEEEEeCCCCCC
Confidence 456888885432 22 333445554 34777776555544332111 1246887763 66
Q ss_pred Cc-hHHHHhhhcc-CCCCcEEEEeC-------------CCCcccC-CCCchhHHHHHHHHHcCC
Q 002281 765 DG-VILHASNLFR-GAVPPVISFNL-------------GSLGFLT-SHPFEDYRQDLRQVIYGN 812 (943)
Q Consensus 765 DG-TiL~Aar~~~-~~~~PVLGIN~-------------GsLGFLt-~~~~ed~~~~L~~ll~G~ 812 (943)
|| .+++..+... ...+||+-+.. |-.+||. +++.+++...+++++++.
T Consensus 65 ~g~~~~~~lr~~~~~~~~pii~~s~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~i~~~l~~~ 128 (154)
T 3gt7_A 65 DGYALCRWLKGQPDLRTIPVILLTILSDPRDVVRSLECGADDFITKPCKDVVLASHVKRLLSGV 128 (154)
T ss_dssp CHHHHHHHHHHSTTTTTSCEEEEECCCSHHHHHHHHHHCCSEEEESSCCHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHhCCCcCCCCEEEEECCCChHHHHHHHHCCCCEEEeCCCCHHHHHHHHHHHHHHH
Confidence 77 3455555432 24678887642 6677776 578889999999998875
No 140
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=59.58 E-value=6.1 Score=45.43 Aligned_cols=76 Identities=18% Similarity=0.319 Sum_probs=44.3
Q ss_pred CCHhhHHHHHHcCCcEEEEcCCCcccCcchhhhhHHhhhcCCcEEEEEecCCCCCCCHHHHHHHHHHHhcCCCCcEEEeC
Q 002281 275 VTEEGLKWLMEKGYKTIVDIRAERVKDNFYEAAIDDAILSGKVELIKIPVEVRTAPTMEQVEKFASLVSNSSKKPLYLHS 354 (943)
Q Consensus 275 pT~eDLa~Lk~lGIKTVIDLRse~~ee~~~~a~e~e~~e~~GI~yIhIPV~d~~~Ps~E~v~aFlelL~ds~~~PVLVHC 354 (943)
++++++..+.+.++ .|||.|++. + |. .-...| -+++|+. .+...+.-+ ..++|++++|
T Consensus 491 i~~~~~~~~~~~~~-~~iDvR~~~-e---~~-----~ghi~g--a~~ip~~--------~l~~~~~~l--~~~~~iv~~C 548 (588)
T 3ics_A 491 VQWHEIDRIVENGG-YLIDVREPN-E---LK-----QGMIKG--SINIPLD--------ELRDRLEEV--PVDKDIYITC 548 (588)
T ss_dssp ECTTTHHHHHHTTC-EEEECSCGG-G---GG-----GCBCTT--EEECCHH--------HHTTCGGGS--CSSSCEEEEC
T ss_pred ecHHHHHHHhcCCC-EEEEcCCHH-H---Hh-----cCCCCC--CEECCHH--------HHHHHHhhC--CCCCeEEEEC
Confidence 56777766666674 799999875 1 11 011223 3566652 222111112 3467999999
Q ss_pred ccCCchHHHHHHHHHHhcCC
Q 002281 355 KEGVWRTYAMVSRWRQYMAR 374 (943)
Q Consensus 355 ~AGKDRTGALvaLlr~~lGv 374 (943)
..|. |+..++.+++. +|.
T Consensus 549 ~~g~-rs~~a~~~l~~-~G~ 566 (588)
T 3ics_A 549 QLGM-RGYVAARMLME-KGY 566 (588)
T ss_dssp SSSH-HHHHHHHHHHH-TTC
T ss_pred CCCc-HHHHHHHHHHH-cCC
Confidence 9996 88766655544 454
No 141
>2wlr_A Putative thiosulfate sulfurtransferase YNJE; rhodanese domains; HET: EPE; 1.45A {Escherichia coli} PDB: 2wlx_A* 3ipo_A* 3ipp_A
Probab=59.50 E-value=9.6 Score=42.41 Aligned_cols=28 Identities=14% Similarity=0.114 Sum_probs=20.1
Q ss_pred CCCCcEEEeCccCCchHHHHHHHHHHhcCC
Q 002281 345 SSKKPLYLHSKEGVWRTYAMVSRWRQYMAR 374 (943)
Q Consensus 345 s~~~PVLVHC~AGKDRTGALvaLlr~~lGv 374 (943)
..++||++||.+|. |+..++..++. +|.
T Consensus 356 ~~~~~ivvyC~sG~-rs~~aa~~L~~-~G~ 383 (423)
T 2wlr_A 356 KPEQQVSFYCGTGW-RASETFMYARA-MGW 383 (423)
T ss_dssp CTTSEEEEECSSSH-HHHHHHHHHHH-TTC
T ss_pred CCCCcEEEECCcHH-HHHHHHHHHHH-cCC
Confidence 35689999999998 88866655433 453
No 142
>1rrm_A Lactaldehyde reductase; structural genomics, dehydrogenase, PSI, protein structure initiative; HET: APR; 1.60A {Escherichia coli} SCOP: e.22.1.2 PDB: 2bi4_A* 2bl4_A*
Probab=58.42 E-value=6.3 Score=43.42 Aligned_cols=88 Identities=11% Similarity=0.141 Sum_probs=50.3
Q ss_pred CCEEEEEecCChhHHHHHHHHHHHHhcCCCeEEEEcCChhhhhhcCCCCccceeeeccCccc-cccCccEEEEEcCCchH
Q 002281 690 PRTVLVLKKPGPALMEEAKEVASFLYHQEKMNILVEPDVHDIFARIPGFGFVQTFYLQDTSD-LHERVDFVACLGGDGVI 768 (943)
Q Consensus 690 pk~VlIv~K~~~~~~~~a~~l~~~L~~~~g~~V~ve~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~DlVIvLGGDGTi 768 (943)
.++++||....-.......++.+.|.+ .++++.+-+.+. ..|....+... .+. ...++|+||.||| |++
T Consensus 31 ~~~~livtd~~~~~~g~~~~v~~~L~~-~g~~~~~~~~~~----~~p~~~~v~~~----~~~~~~~~~d~IIavGG-Gsv 100 (386)
T 1rrm_A 31 YQKALIVTDKTLVQCGVVAKVTDKMDA-AGLAWAIYDGVV----PNPTITVVKEG----LGVFQNSGADYLIAIGG-GSP 100 (386)
T ss_dssp CCEEEEECBHHHHHTTHHHHHHHHHHH-TTCEEEEECBCC----SSCBHHHHHHH----HHHHHHHTCSEEEEEES-HHH
T ss_pred CCEEEEEECcchhhchHHHHHHHHHHH-cCCeEEEECCcc----CCCCHHHHHHH----HHHHHhcCcCEEEEeCC-hHH
Confidence 478999985332111246778888854 467765322221 11111000000 011 1246899999999 999
Q ss_pred HHHhhhcc---------------------CCCCcEEEEeC
Q 002281 769 LHASNLFR---------------------GAVPPVISFNL 787 (943)
Q Consensus 769 L~Aar~~~---------------------~~~~PVLGIN~ 787 (943)
+-+++... ...+|++.|-+
T Consensus 101 ~D~aK~iA~~~~~~~~~~~~d~~~~~~~~~~~~p~i~IPT 140 (386)
T 1rrm_A 101 QDTCKAIGIISNNPEFADVRSLEGLSPTNKPSVPILAIPT 140 (386)
T ss_dssp HHHHHHHHHHHHCGGGTTSGGGSEECCCCSCCSCEEEEEC
T ss_pred HHHHHHHHHHHhCCCCCCHHHHhcccccCCCCCCEEEEeC
Confidence 99888542 23678988875
No 143
>1urh_A 3-mercaptopyruvate sulfurtransferase; rhodanese; 2.8A {Escherichia coli} SCOP: c.46.1.2 c.46.1.2
Probab=58.42 E-value=24 Score=36.58 Aligned_cols=96 Identities=13% Similarity=-0.033 Sum_probs=48.4
Q ss_pred CCHhhHHHHHHcCCcEEEEcCCCcccCc-chhhhhHHhhhcCCcEEEEEecCCC---------CCCCHHHHHHHHHHHhc
Q 002281 275 VTEEGLKWLMEKGYKTIVDIRAERVKDN-FYEAAIDDAILSGKVELIKIPVEVR---------TAPTMEQVEKFASLVSN 344 (943)
Q Consensus 275 pT~eDLa~Lk~lGIKTVIDLRse~~ee~-~~~a~e~e~~e~~GI~yIhIPV~d~---------~~Ps~E~v~aFlelL~d 344 (943)
++++++..+.+.+=-.|||.|....... .....+-..-...|. +++|+... ..|+.+.+.+.+..+--
T Consensus 6 is~~~l~~~l~~~~~~iiDvR~~~~~~~~~~~~~e~~~ghIpgA--i~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~gi 83 (280)
T 1urh_A 6 VGADWLAEHIDDPEIQIIDARMASPGQEDRNVAQEYLNGHIPGA--VFFDIEALSDHTSPLPHMLPRPETFAVAMRELGV 83 (280)
T ss_dssp ECHHHHHTTTTCTTEEEEECCCCCSSCTTCCHHHHHHHSBCTTC--EECCGGGGSCSSSSSSSCCCCHHHHHHHHHHTTC
T ss_pred eeHHHHHHhcCCCCeEEEEeeccCCcccccchhhhhhhCcCCCC--EECCHHHhcCCCCCCCCCCCCHHHHHHHHHHcCC
Confidence 4666665544332237999993210000 001111111233444 45666421 23456777666655412
Q ss_pred CCCCcEEEeCccCCch-HHHHHHHHHHhcCC
Q 002281 345 SSKKPLYLHSKEGVWR-TYAMVSRWRQYMAR 374 (943)
Q Consensus 345 s~~~PVLVHC~AGKDR-TGALvaLlr~~lGv 374 (943)
..+.+|+|+|..|. | +..++.+++. +|.
T Consensus 84 ~~~~~ivvyc~~g~-~~a~~a~~~L~~-~G~ 112 (280)
T 1urh_A 84 NQDKHLIVYDEGNL-FSAPRAWWMLRT-FGV 112 (280)
T ss_dssp CTTSEEEEECSSSC-SSHHHHHHHHHH-TTC
T ss_pred CCCCeEEEECCCCC-ccHHHHHHHHHH-cCC
Confidence 45789999999997 6 5544444433 443
No 144
>1o2d_A Alcohol dehydrogenase, iron-containing; TM0920, structural genomics, JCSG, PSI, protein structure initiative; HET: MSE NAP TRS; 1.30A {Thermotoga maritima} SCOP: e.22.1.2 PDB: 1vhd_A*
Probab=57.67 E-value=7 Score=43.02 Aligned_cols=75 Identities=19% Similarity=0.291 Sum_probs=40.8
Q ss_pred CEEEEEecCCh-hHHHHHHHHHHHHhcCCCeEEEEcCChhhhhhcCCCCccceeeeccCccc-cccCccEEEEEcCCchH
Q 002281 691 RTVLVLKKPGP-ALMEEAKEVASFLYHQEKMNILVEPDVHDIFARIPGFGFVQTFYLQDTSD-LHERVDFVACLGGDGVI 768 (943)
Q Consensus 691 k~VlIv~K~~~-~~~~~a~~l~~~L~~~~g~~V~ve~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~DlVIvLGGDGTi 768 (943)
++++||.-.+. .......++.+.|.+ .++++.+-+.+. ..|....+... .+. ...++|+||.||| |++
T Consensus 41 ~~~liVtd~~~~~~~g~~~~v~~~L~~-~g~~~~~~~~~~----~~p~~~~v~~~----~~~~~~~~~d~IIavGG-Gsv 110 (371)
T 1o2d_A 41 KRALVVTGKSSSKKNGSLDDLKKLLDE-TEISYEIFDEVE----ENPSFDNVMKA----VERYRNDSFDFVVGLGG-GSP 110 (371)
T ss_dssp SEEEEEEESSGGGTSSHHHHHHHHHHH-TTCEEEEEEEEC----SSCBHHHHHHH----HHHHTTSCCSEEEEEES-HHH
T ss_pred CEEEEEECchHHhhccHHHHHHHHHHH-cCCeEEEeCCcc----CCCCHHHHHHH----HHHHHhcCCCEEEEeCC-hHH
Confidence 78898886643 222345667777754 466654322111 01110000000 001 1247899999999 999
Q ss_pred HHHhhhc
Q 002281 769 LHASNLF 775 (943)
Q Consensus 769 L~Aar~~ 775 (943)
+-+++..
T Consensus 111 ~D~AK~i 117 (371)
T 1o2d_A 111 MDFAKAV 117 (371)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9998864
No 145
>2gru_A 2-deoxy-scyllo-inosose synthase; aminoglycoside, 2-deoxystreptamine, dehydroquinate synthase, lyase; HET: NAD EXO CAK; 2.15A {Bacillus circulans} PDB: 2d2x_A*
Probab=57.34 E-value=15 Score=40.48 Aligned_cols=92 Identities=11% Similarity=0.059 Sum_probs=50.3
Q ss_pred CCEEEEEecCChhHHHHHHHHHHHHhcCCCeEEEEcCChhhhhhcCCCCccceeeeccCccccccCccEEEEEcCCchHH
Q 002281 690 PRTVLVLKKPGPALMEEAKEVASFLYHQEKMNILVEPDVHDIFARIPGFGFVQTFYLQDTSDLHERVDFVACLGGDGVIL 769 (943)
Q Consensus 690 pk~VlIv~K~~~~~~~~a~~l~~~L~~~~g~~V~ve~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~DlVIvLGGDGTiL 769 (943)
.++++||....-... ...++.+.|.+.-.+.+++-++... .+.+..+...+..-.+.-..+.|+||.||| |+++
T Consensus 34 ~~k~liVtd~~v~~~-~~~~v~~~L~~~~~~~~~~~~~ge~----~k~~~~v~~~~~~~~~~~~~r~d~iIalGG-Gsv~ 107 (368)
T 2gru_A 34 FDQYIMISDSGVPDS-IVHYAAEYFGKLAPVHILRFQGGEE----YKTLSTVTNLQERAIALGANRRTAIVAVGG-GLTG 107 (368)
T ss_dssp CSEEEEEEETTSCHH-HHHHHHHHHTTTSCEEEEEECCSGG----GCSHHHHHHHHHHHHHTTCCTTEEEEEEES-HHHH
T ss_pred CCEEEEEECCcHHHH-HHHHHHHHHHhccceeEEEeCCCCC----CCCHHHHHHHHHHHHhcCCCCCcEEEEECC-hHHH
Confidence 578999987663222 4677888885321233233222211 111111110000000111245799999999 9999
Q ss_pred HHhhhcc---CCCCcEEEEeC
Q 002281 770 HASNLFR---GAVPPVISFNL 787 (943)
Q Consensus 770 ~Aar~~~---~~~~PVLGIN~ 787 (943)
-++.... ...+|++-|-+
T Consensus 108 D~ak~~Aa~~~rgip~i~IPT 128 (368)
T 2gru_A 108 NVAGVAAGMMFRGIALIHVPT 128 (368)
T ss_dssp HHHHHHHHHBTTCCEEEEEEC
T ss_pred HHHHHHHHHhcCCCCEEEECC
Confidence 9888755 45788888776
No 146
>3hix_A ALR3790 protein; rhodanese, rhodanese_3, Q8YQN0, Q8YQN0_anAsp, NSR437I, NESG, structural genomics, PSI-2, protein structure initiative; 1.92A {Anabaena SP} PDB: 3k9r_A
Probab=55.90 E-value=11 Score=33.54 Aligned_cols=28 Identities=14% Similarity=0.170 Sum_probs=18.7
Q ss_pred CCCCcEEEeCccCCchHHHHHHHHHHhcCC
Q 002281 345 SSKKPLYLHSKEGVWRTYAMVSRWRQYMAR 374 (943)
Q Consensus 345 s~~~PVLVHC~AGKDRTGALvaLlr~~lGv 374 (943)
..+.||+++|..|. |+..++.+++. +|.
T Consensus 50 ~~~~~ivvyc~~g~-rs~~a~~~L~~-~G~ 77 (106)
T 3hix_A 50 EKSRDIYVYGAGDE-QTSQAVNLLRS-AGF 77 (106)
T ss_dssp CTTSCEEEECSSHH-HHHHHHHHHHH-TTC
T ss_pred CCCCeEEEEECCCC-hHHHHHHHHHH-cCC
Confidence 35679999999987 76655444433 454
No 147
>3ox4_A Alcohol dehydrogenase 2; iron, NAD, oxidoreductase; HET: NAD; 2.00A {Zymomonas mobilis} PDB: 3owo_A*
Probab=55.89 E-value=4.3 Score=45.00 Aligned_cols=88 Identities=23% Similarity=0.208 Sum_probs=50.5
Q ss_pred CCEEEEEecCChhHHHHHHHHHHHHhcCCCeEEEEcCChhhhhhcCCCCccceeeeccCccc-cccCccEEEEEcCCchH
Q 002281 690 PRTVLVLKKPGPALMEEAKEVASFLYHQEKMNILVEPDVHDIFARIPGFGFVQTFYLQDTSD-LHERVDFVACLGGDGVI 768 (943)
Q Consensus 690 pk~VlIv~K~~~~~~~~a~~l~~~L~~~~g~~V~ve~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~DlVIvLGGDGTi 768 (943)
.++++||....-.......++.+.|.+ .|+++.+-+.+. ..|....+... .+. ...++|+||.||| |++
T Consensus 31 ~~~~liVtd~~~~~~g~~~~v~~~L~~-~gi~~~~~~~v~----~~p~~~~v~~~----~~~~~~~~~D~IIavGG-Gsv 100 (383)
T 3ox4_A 31 FKNALIVSDAFMNKSGVVKQVADLLKA-QGINSAVYDGVM----PNPTVTAVLEG----LKILKDNNSDFVISLGG-GSP 100 (383)
T ss_dssp CCEEEEEEEHHHHHTTHHHHHHHHHHT-TTCEEEEEEEEC----SSCBHHHHHHH----HHHHHHHTCSEEEEEES-HHH
T ss_pred CCEEEEEECCchhhCchHHHHHHHHHH-cCCeEEEECCcc----CCCCHHHHHHH----HHHHHhcCcCEEEEeCC-cHH
Confidence 478999986531111246788888864 577764322211 01111000000 000 1247899999999 999
Q ss_pred HHHhhhcc-------------------CCCCcEEEEeC
Q 002281 769 LHASNLFR-------------------GAVPPVISFNL 787 (943)
Q Consensus 769 L~Aar~~~-------------------~~~~PVLGIN~ 787 (943)
+-+++... ...+|++.|-+
T Consensus 101 ~D~aK~ia~~~~~~~~~~d~~~~~~~~~~~~p~i~IPT 138 (383)
T 3ox4_A 101 HDCAKAIALVATNGGEVKDYEGIDKSKKPALPLMSINT 138 (383)
T ss_dssp HHHHHHHHHHHHSCSSGGGGCEESCCSSCCSCEEEEEC
T ss_pred HHHHHHHHHHHhCCCCHHHHhcccccccCCCCEEEEeC
Confidence 99888642 12678888875
No 148
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=55.21 E-value=12 Score=35.39 Aligned_cols=54 Identities=19% Similarity=0.185 Sum_probs=41.3
Q ss_pred cCccEEEEEcCCchHHHHhhhccCCCCcEEEEeC-------------CCCcccCC---CCchhHHHHHHHHHcC
Q 002281 754 ERVDFVACLGGDGVILHASNLFRGAVPPVISFNL-------------GSLGFLTS---HPFEDYRQDLRQVIYG 811 (943)
Q Consensus 754 ~~~DlVIvLGGDGTiL~Aar~~~~~~~PVLGIN~-------------GsLGFLt~---~~~ed~~~~L~~ll~G 811 (943)
..+|++|+-||-||++.+... ++|++.+.. ...|++.+ ++.+++.++|.+++..
T Consensus 85 ~~ad~~I~~~G~~t~~Ea~~~----G~P~i~~p~~~~Q~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~~ 154 (170)
T 2o6l_A 85 PKTRAFITHGGANGIYEAIYH----GIPMVGIPLFADQPDNIAHMKARGAAVRVDFNTMSSTDLLNALKRVIND 154 (170)
T ss_dssp TTEEEEEECCCHHHHHHHHHH----TCCEEECCCSTTHHHHHHHHHTTTSEEECCTTTCCHHHHHHHHHHHHHC
T ss_pred CCcCEEEEcCCccHHHHHHHc----CCCEEeccchhhHHHHHHHHHHcCCeEEeccccCCHHHHHHHHHHHHcC
Confidence 789999999999999998765 579998864 24566654 3567788888888753
No 149
>1oj7_A Hypothetical oxidoreductase YQHD; structural genomics; HET: NZQ; 2.0A {Escherichia coli} SCOP: e.22.1.2
Probab=54.66 E-value=10 Score=42.22 Aligned_cols=73 Identities=19% Similarity=0.305 Sum_probs=40.4
Q ss_pred CEEEEEecCCh-hHHHHHHHHHHHHhcCCCeEEEEcCChhhhhhcCCCCccceeeeccCccc-cccCccEEEEEcCCchH
Q 002281 691 RTVLVLKKPGP-ALMEEAKEVASFLYHQEKMNILVEPDVHDIFARIPGFGFVQTFYLQDTSD-LHERVDFVACLGGDGVI 768 (943)
Q Consensus 691 k~VlIv~K~~~-~~~~~a~~l~~~L~~~~g~~V~ve~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~DlVIvLGGDGTi 768 (943)
++++||.-... .......++.+.|. ++++.+-+++. ..|....+... .+. ...++|+||.||| |++
T Consensus 51 ~r~liVtd~~~~~~~g~~~~v~~~L~---g~~~~~f~~v~----~~p~~~~v~~~----~~~~~~~~~D~IIavGG-Gsv 118 (408)
T 1oj7_A 51 ARVLITYGGGSVKKTGVLDQVLDALK---GMDVLEFGGIE----PNPAYETLMNA----VKLVREQKVTFLLAVGG-GSV 118 (408)
T ss_dssp CEEEEEECSSHHHHHSHHHHHHHHTT---TSEEEEECCCC----SSCBHHHHHHH----HHHHHHHTCCEEEEEES-HHH
T ss_pred CEEEEEECCchhhhccHHHHHHHHhC---CCEEEEeCCcC----CCcCHHHHHHH----HHHHHHcCCCEEEEeCC-chH
Confidence 78999985442 22225677777773 66654433221 01111000000 001 1246899999999 999
Q ss_pred HHHhhhc
Q 002281 769 LHASNLF 775 (943)
Q Consensus 769 L~Aar~~ 775 (943)
+-+++..
T Consensus 119 iD~AK~i 125 (408)
T 1oj7_A 119 LDGTKFI 125 (408)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9988864
No 150
>3nhv_A BH2092 protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 2.50A {Bacillus halodurans} PDB: 3o3w_A
Probab=54.49 E-value=19 Score=34.23 Aligned_cols=77 Identities=17% Similarity=0.146 Sum_probs=44.9
Q ss_pred CCCHhhHHHHHHcC--CcEEEEcCCCcccCcchhhhhHHhhhcCCcEEEEEecCCCCCCCHHHHHHHHHHHhcCCCCcEE
Q 002281 274 QVTEEGLKWLMEKG--YKTIVDIRAERVKDNFYEAAIDDAILSGKVELIKIPVEVRTAPTMEQVEKFASLVSNSSKKPLY 351 (943)
Q Consensus 274 qpT~eDLa~Lk~lG--IKTVIDLRse~~ee~~~~a~e~e~~e~~GI~yIhIPV~d~~~Ps~E~v~aFlelL~ds~~~PVL 351 (943)
.++++++..+.+.+ =-.|||.|+.. + |. .-...|. +++|+...... .+.-+ ..+.||+
T Consensus 17 ~is~~el~~~l~~~~~~~~liDvR~~~-e---y~-----~ghIpgA--inip~~~l~~~-------~~~~l--~~~~~iv 76 (144)
T 3nhv_A 17 ETDIADLSIDIKKGYEGIIVVDVRDAE-A---YK-----ECHIPTA--ISIPGNKINED-------TTKRL--SKEKVII 76 (144)
T ss_dssp EEEHHHHHHHHHTTCCSEEEEECSCHH-H---HH-----HCBCTTC--EECCGGGCSTT-------TTTTC--CTTSEEE
T ss_pred ccCHHHHHHHHHcCCCCEEEEECcCHH-H---Hh-----cCCCCCC--EECCHHHHhHH-------HHhhC--CCCCeEE
Confidence 35778877766665 35799999864 1 11 1122343 56776532210 01111 3467999
Q ss_pred EeCccCC-chHHHHHHHHHH
Q 002281 352 LHSKEGV-WRTYAMVSRWRQ 370 (943)
Q Consensus 352 VHC~AGK-DRTGALvaLlr~ 370 (943)
++|..|. .|+..++..++.
T Consensus 77 vyC~~g~~~rs~~aa~~L~~ 96 (144)
T 3nhv_A 77 TYCWGPACNGATKAAAKFAQ 96 (144)
T ss_dssp EECSCTTCCHHHHHHHHHHH
T ss_pred EEECCCCccHHHHHHHHHHH
Confidence 9999995 487766655544
No 151
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=54.12 E-value=60 Score=34.32 Aligned_cols=59 Identities=19% Similarity=0.364 Sum_probs=45.3
Q ss_pred ccccccCccEEEEEcCCchHHHHhhhccCCCCcEEEEeC-------------CCCcccCCC-----CchhHHHHHHHHHc
Q 002281 749 TSDLHERVDFVACLGGDGVILHASNLFRGAVPPVISFNL-------------GSLGFLTSH-----PFEDYRQDLRQVIY 810 (943)
Q Consensus 749 ~~~l~~~~DlVIvLGGDGTiL~Aar~~~~~~~PVLGIN~-------------GsLGFLt~~-----~~ed~~~~L~~ll~ 810 (943)
..++...+|++|+=||=||++.|+.. ++|++.+.. +..|++.+. +.+.+.+++.++++
T Consensus 280 ~~~ll~~ad~~v~~~G~~t~~Ea~~~----G~P~v~~p~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~~~l~~ai~~ll~ 355 (391)
T 3tsa_A 280 LNLFLRTCELVICAGGSGTAFTATRL----GIPQLVLPQYFDQFDYARNLAAAGAGICLPDEQAQSDHEQFTDSIATVLG 355 (391)
T ss_dssp GGGTGGGCSEEEECCCHHHHHHHHHT----TCCEEECCCSTTHHHHHHHHHHTTSEEECCSHHHHTCHHHHHHHHHHHHT
T ss_pred HHHHHhhCCEEEeCCCHHHHHHHHHh----CCCEEecCCcccHHHHHHHHHHcCCEEecCcccccCCHHHHHHHHHHHHc
Confidence 34566889999999999999988764 579988644 246777654 57788889988886
Q ss_pred C
Q 002281 811 G 811 (943)
Q Consensus 811 G 811 (943)
.
T Consensus 356 ~ 356 (391)
T 3tsa_A 356 D 356 (391)
T ss_dssp C
T ss_pred C
Confidence 4
No 152
>1xah_A Sadhqs, 3-dehydroquinate synthase; shikimate pathway, aromatic amino acid biosynthesis, open form, form B, domain movement, cyclase; HET: NAD; 2.20A {Staphylococcus aureus} PDB: 1xag_A* 1xai_A* 1xaj_A* 1xal_A*
Probab=54.10 E-value=7.8 Score=42.33 Aligned_cols=89 Identities=13% Similarity=0.043 Sum_probs=44.8
Q ss_pred CEEEEEecCChhHHHHHHHHHHHHhcCCC-eEEEEcCChhhhhhcCCCCccceeeeccCccccccCccEEEEEcCCchHH
Q 002281 691 RTVLVLKKPGPALMEEAKEVASFLYHQEK-MNILVEPDVHDIFARIPGFGFVQTFYLQDTSDLHERVDFVACLGGDGVIL 769 (943)
Q Consensus 691 k~VlIv~K~~~~~~~~a~~l~~~L~~~~g-~~V~ve~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~DlVIvLGGDGTiL 769 (943)
++++||....-... ...++.+.| +. + +.+++-++... .|....+......-.+.-.++.|+||.||| |+++
T Consensus 32 ~~~liVtd~~~~~~-~~~~v~~~L-~~-g~~~~~~~~~~e~----~p~~~~v~~~~~~~~~~~~~r~d~iIavGG-Gsv~ 103 (354)
T 1xah_A 32 DQSFLLIDEYVNQY-FANKFDDIL-SY-ENVHKVIIPAGEK----TKTFEQYQETLEYILSHHVTRNTAIIAVGG-GATG 103 (354)
T ss_dssp SCEEEEEEHHHHHH-HHHHHC--------CEEEEEECSGGG----GCSHHHHHHHHHHHHTTCCCTTCEEEEEES-HHHH
T ss_pred CeEEEEECCcHHHH-HHHHHHHHH-hc-CCeEEEEECCCCC----CCCHHHHHHHHHHHHHcCCCCCceEEEECC-hHHH
Confidence 67899876432111 456777777 43 4 55443333221 111111100000000011123499999999 9999
Q ss_pred HHhhhcc---CCCCcEEEEeC
Q 002281 770 HASNLFR---GAVPPVISFNL 787 (943)
Q Consensus 770 ~Aar~~~---~~~~PVLGIN~ 787 (943)
-+++... ...+|++.|-+
T Consensus 104 D~ak~vA~~~~rgip~i~IPT 124 (354)
T 1xah_A 104 DFAGFVAATLLRGVHFIQVPT 124 (354)
T ss_dssp HHHHHHHHHBTTCCEEEEEEC
T ss_pred HHHHHHHHHhccCCCEEEECC
Confidence 9988764 46789998876
No 153
>3ce9_A Glycerol dehydrogenase; NP_348253.1, 3-dehydroquinate syntha structural genomics, joint center for structural genomics; HET: MSE; 2.37A {Clostridium acetobutylicum atcc 824}
Probab=52.80 E-value=15 Score=39.97 Aligned_cols=82 Identities=16% Similarity=0.127 Sum_probs=50.7
Q ss_pred CCEEEEEecCChhHHHHHHHHHHHHhcCCCeEE--EE-cCC-hhhhhhcCCCCccceeeeccCccccccCccEEEEEcCC
Q 002281 690 PRTVLVLKKPGPALMEEAKEVASFLYHQEKMNI--LV-EPD-VHDIFARIPGFGFVQTFYLQDTSDLHERVDFVACLGGD 765 (943)
Q Consensus 690 pk~VlIv~K~~~~~~~~a~~l~~~L~~~~g~~V--~v-e~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~DlVIvLGGD 765 (943)
.++++||....-.. ....++.+.|.+ .++++ +. .++ ..+.+.+. . .-...++|+||.|||
T Consensus 34 ~~~~livtd~~~~~-~~~~~v~~~L~~-~g~~~~~~~~~~~~~~~~v~~~-~------------~~~~~~~d~IIavGG- 97 (354)
T 3ce9_A 34 FKRVSLYFGEGIYE-LFGETIEKSIKS-SNIEIEAVETVKNIDFDEIGTN-A------------FKIPAEVDALIGIGG- 97 (354)
T ss_dssp CSEEEEEEETTHHH-HHHHHHHHHHHT-TTCEEEEEEEECCCBHHHHHHH-H------------TTSCTTCCEEEEEES-
T ss_pred CCeEEEEECccHHH-HHHHHHHHHHHH-cCCeEEEEecCCCCCHHHHHHH-H------------HhhhcCCCEEEEECC-
Confidence 36899998766422 345778888854 46554 32 121 11111110 0 011257899999999
Q ss_pred chHHHHhhhccC-CCCcEEEEeC
Q 002281 766 GVILHASNLFRG-AVPPVISFNL 787 (943)
Q Consensus 766 GTiL~Aar~~~~-~~~PVLGIN~ 787 (943)
|+++-+++...- ..+|++.|-+
T Consensus 98 Gsv~D~aK~vA~~~~~p~i~IPT 120 (354)
T 3ce9_A 98 GKAIDAVKYMAFLRKLPFISVPT 120 (354)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEES
T ss_pred hHHHHHHHHHHhhcCCCEEEecC
Confidence 999999987652 4689998875
No 154
>3hdv_A Response regulator; PSI-II, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.09A {Pseudomonas putida} SCOP: c.23.1.0
Probab=52.74 E-value=49 Score=29.10 Aligned_cols=103 Identities=11% Similarity=0.135 Sum_probs=57.2
Q ss_pred CCEEEEEecCChhHHHHHHHHHHHHhcCCCeEEEEcCChhhhhhcCCCCccceeeeccCccccccCccEEEE----EcCC
Q 002281 690 PRTVLVLKKPGPALMEEAKEVASFLYHQEKMNILVEPDVHDIFARIPGFGFVQTFYLQDTSDLHERVDFVAC----LGGD 765 (943)
Q Consensus 690 pk~VlIv~K~~~~~~~~a~~l~~~L~~~~g~~V~ve~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~DlVIv----LGGD 765 (943)
..+|+||-... .. ...+.++|.+ .|++|....+..+.+... .-...+|+||+ -|+|
T Consensus 7 ~~~ilivdd~~-~~---~~~l~~~L~~-~g~~v~~~~~~~~a~~~~---------------~~~~~~dlvi~D~~l~~~~ 66 (136)
T 3hdv_A 7 RPLVLVVDDNA-VN---REALILYLKS-RGIDAVGADGAEEARLYL---------------HYQKRIGLMITDLRMQPES 66 (136)
T ss_dssp CCEEEEECSCH-HH---HHHHHHHHHH-TTCCEEEESSHHHHHHHH---------------HHCTTEEEEEECSCCSSSC
T ss_pred CCeEEEECCCH-HH---HHHHHHHHHH-cCceEEEeCCHHHHHHHH---------------HhCCCCcEEEEeccCCCCC
Confidence 46788886433 22 2334444543 367776544443322110 00113677775 3556
Q ss_pred c-hHHHHhhhccCCCCcEEEEeC-------------CCCcccC-CCCchhHHHHHHHHHcCC
Q 002281 766 G-VILHASNLFRGAVPPVISFNL-------------GSLGFLT-SHPFEDYRQDLRQVIYGN 812 (943)
Q Consensus 766 G-TiL~Aar~~~~~~~PVLGIN~-------------GsLGFLt-~~~~ed~~~~L~~ll~G~ 812 (943)
| .+++..+......+||+-+.. |-.+||. +++.+++...|+++..|.
T Consensus 67 g~~~~~~l~~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~i~~~~~~~ 128 (136)
T 3hdv_A 67 GLDLIRTIRASERAALSIIVVSGDTDVEEAVDVMHLGVVDFLLKPVDLGKLLELVNKELKIG 128 (136)
T ss_dssp HHHHHHHHHTSTTTTCEEEEEESSCCHHHHHHHHHTTCSEEEESSCCHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHhcCCCCCCEEEEeCCCChHHHHHHHhCCcceEEeCCCCHHHHHHHHHHHhcCc
Confidence 6 344555443234578876643 5667776 578889999999998876
No 155
>3hzu_A Thiosulfate sulfurtransferase SSEA; niaid, ssgcid, infectious disease, transferase structural genomics; 2.10A {Mycobacterium tuberculosis} PDB: 3p3a_A
Probab=52.19 E-value=25 Score=37.68 Aligned_cols=89 Identities=16% Similarity=0.120 Sum_probs=50.2
Q ss_pred CCHhhHHHHHHcCCcEEEEcCCCcccCcchhhhhHHhhhcCCcEEEEEecC-------CCCCCCHHHHHHHHHHHhcCCC
Q 002281 275 VTEEGLKWLMEKGYKTIVDIRAERVKDNFYEAAIDDAILSGKVELIKIPVE-------VRTAPTMEQVEKFASLVSNSSK 347 (943)
Q Consensus 275 pT~eDLa~Lk~lGIKTVIDLRse~~ee~~~~a~e~e~~e~~GI~yIhIPV~-------d~~~Ps~E~v~aFlelL~ds~~ 347 (943)
++.+++..+.+.+=-.|||.|+.. + .|. .-...| -+++|+. ....++.+.+...+..+--..+
T Consensus 42 is~~~l~~~l~~~~~~iiDvR~~~-e--~y~-----~gHIpG--Ai~ip~~~~~~~~~~~~~~~~~~~~~~l~~lgi~~~ 111 (318)
T 3hzu_A 42 VTADWLSAHMGAPGLAIVESDEDV-L--LYD-----VGHIPG--AVKIDWHTDLNDPRVRDYINGEQFAELMDRKGIARD 111 (318)
T ss_dssp ECHHHHHHHTTCTTEEEEECCSST-T--SGG-----GCBCTT--EEECCHHHHHBCSSSSSBCCHHHHHHHHHHTTCCTT
T ss_pred ecHHHHHHhccCCCEEEEECCCCh-h--HHh-----cCcCCC--CeEeCchhhhccCcccCCCCHHHHHHHHHHcCCCCC
Confidence 577777666544335799999864 1 111 012234 3445541 1234566777666655322457
Q ss_pred CcEEEeCccCCchHHHHHHHHHHhcCC
Q 002281 348 KPLYLHSKEGVWRTYAMVSRWRQYMAR 374 (943)
Q Consensus 348 ~PVLVHC~AGKDRTGALvaLlr~~lGv 374 (943)
.||+|+|..|..|+..++.+++ .+|.
T Consensus 112 ~~vVvyc~~g~~~a~~a~~~L~-~~G~ 137 (318)
T 3hzu_A 112 DTVVIYGDKSNWWAAYALWVFT-LFGH 137 (318)
T ss_dssp CEEEEECSGGGHHHHHHHHHHH-HTTC
T ss_pred CeEEEECCCCCccHHHHHHHHH-HcCC
Confidence 8999999999866654444443 3444
No 156
>3op3_A M-phase inducer phosphatase 3; structural genomics, structural genomics consortium, SGC, Al alpha sandwich, kinase, cytosol, hydrolase; 2.63A {Homo sapiens}
Probab=51.95 E-value=14 Score=38.14 Aligned_cols=78 Identities=18% Similarity=0.203 Sum_probs=42.1
Q ss_pred CCCHhhHHHHHHcCC------cEEEEcCCCcccCcchhhhhHHhhhcCCcEEEEEecCCCCCCCHHHHHHHH-H--HHhc
Q 002281 274 QVTEEGLKWLMEKGY------KTIVDIRAERVKDNFYEAAIDDAILSGKVELIKIPVEVRTAPTMEQVEKFA-S--LVSN 344 (943)
Q Consensus 274 qpT~eDLa~Lk~lGI------KTVIDLRse~~ee~~~~a~e~e~~e~~GI~yIhIPV~d~~~Ps~E~v~aFl-e--lL~d 344 (943)
.++++++..+.+.+. -.|||.|.+. + | ..-...|. ++||. .+.+..++ + .+..
T Consensus 58 ~Is~~eL~~~l~~~~~~~~~~~~lIDVR~~~-E---y-----~~GHIpGA--inIP~-------~~~l~~~l~~~~~~~~ 119 (216)
T 3op3_A 58 YVNPETVAALLSGKFQGLIEKFYVIDCRYPY-E---Y-----LGGHIQGA--LNLYS-------QEELFNFFLKKPIVPL 119 (216)
T ss_dssp EECHHHHHHHHTTTTTTTEEEEEEEECSCHH-H---H-----HTSEETTC--EECCS-------HHHHHHHHTSSCCCCS
T ss_pred EeCHHHHHHHHhCCCccccCCEEEEEeCcHH-H---H-----hcCCccCC--EECCh-------HHHHHHHHhhcccccc
Confidence 468888888877663 3799999864 1 1 11112232 34444 23333322 1 1101
Q ss_pred CCCC--cEEEeCc-cCCchHHHHHHHHHH
Q 002281 345 SSKK--PLYLHSK-EGVWRTYAMVSRWRQ 370 (943)
Q Consensus 345 s~~~--PVLVHC~-AGKDRTGALvaLlr~ 370 (943)
..++ +|+|||. +|. |+..++..++.
T Consensus 120 ~~~k~~~VVvyC~~SG~-Rs~~aa~~L~~ 147 (216)
T 3op3_A 120 DTQKRIIIVFHCEFSSE-RGPRMCRCLRE 147 (216)
T ss_dssp STTSEEEEEEECCC--C-CHHHHHHHHHH
T ss_pred ccCCCCEEEEEeCCCCh-HHHHHHHHHHH
Confidence 1234 4999999 888 98877666654
No 157
>3okf_A 3-dehydroquinate synthase; structural genomics, center for structural genomics of infec diseases, csgid, NAD, lyase; HET: NAD; 2.50A {Vibrio cholerae o1 biovar eltor}
Probab=51.90 E-value=18 Score=40.64 Aligned_cols=92 Identities=21% Similarity=0.130 Sum_probs=50.9
Q ss_pred CCCEEEEEecCChhHHHHHHHHHHHHhcCCCeEE--EEcCChhhhhhcCCCCccceeeeccCccccccCccEEEEEcCCc
Q 002281 689 TPRTVLVLKKPGPALMEEAKEVASFLYHQEKMNI--LVEPDVHDIFARIPGFGFVQTFYLQDTSDLHERVDFVACLGGDG 766 (943)
Q Consensus 689 ~pk~VlIv~K~~~~~~~~a~~l~~~L~~~~g~~V--~ve~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~DlVIvLGGDG 766 (943)
..++++||.-..-... ...++.+.|.+ .|+++ ++-+.... .+.+..+......-.+.-..+.|+||.||| |
T Consensus 61 ~~~rvlIVtd~~v~~~-~~~~v~~~L~~-~g~~~~~~~~~~gE~----~kt~~~v~~~~~~l~~~~~~R~d~IIAvGG-G 133 (390)
T 3okf_A 61 AKQKVVIVTNHTVAPL-YAPAIISLLDH-IGCQHALLELPDGEQ----YKTLETFNTVMSFLLEHNYSRDVVVIALGG-G 133 (390)
T ss_dssp TTCEEEEEEETTTHHH-HHHHHHHHHHH-HTCEEEEEEECSSGG----GCBHHHHHHHHHHHHHTTCCTTCEEEEEES-H
T ss_pred CCCEEEEEECCcHHHH-HHHHHHHHHHH-cCCeEEEEEECCCcC----CchHHHHHHHHHHHHhcCCCcCcEEEEECC-c
Confidence 4578999988774322 56778888864 35554 22222110 011100100000000011123489999999 9
Q ss_pred hHHHHhhhcc---CCCCcEEEEeC
Q 002281 767 VILHASNLFR---GAVPPVISFNL 787 (943)
Q Consensus 767 TiL~Aar~~~---~~~~PVLGIN~ 787 (943)
+++-++.... ...+|++-|-+
T Consensus 134 sv~D~ak~~Aa~~~rgip~I~IPT 157 (390)
T 3okf_A 134 VIGDLVGFAAACYQRGVDFIQIPT 157 (390)
T ss_dssp HHHHHHHHHHHHBTTCCEEEEEEC
T ss_pred HHhhHHHHHHHHhcCCCCEEEeCC
Confidence 9999988652 46788887765
No 158
>3uhj_A Probable glycerol dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.34A {Sinorhizobium meliloti}
Probab=50.21 E-value=8 Score=43.11 Aligned_cols=84 Identities=11% Similarity=0.076 Sum_probs=45.8
Q ss_pred CEEEEEecCChhHHHHHHHHHHHHhcCCCeEEEEcCChhhhhhcCCCCccceeeeccCccc-cccCccEEEEEcCCchHH
Q 002281 691 RTVLVLKKPGPALMEEAKEVASFLYHQEKMNILVEPDVHDIFARIPGFGFVQTFYLQDTSD-LHERVDFVACLGGDGVIL 769 (943)
Q Consensus 691 k~VlIv~K~~~~~~~~a~~l~~~L~~~~g~~V~ve~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~DlVIvLGGDGTiL 769 (943)
++++||.-..-... ...++.+.|. + ++++.+. .+. ..+....+... .+. ...++|+||.||| |+++
T Consensus 53 ~r~liVtd~~~~~~-~~~~v~~~L~-~-g~~~~~~-~~~----~~p~~~~v~~~----~~~~~~~~~d~IIavGG-Gs~~ 119 (387)
T 3uhj_A 53 KRALVLIDRVLFDA-LSERIGKSCG-D-SLDIRFE-RFG----GECCTSEIERV----RKVAIEHGSDILVGVGG-GKTA 119 (387)
T ss_dssp SEEEEEECTTTHHH-HHHHC--------CCEEEEE-ECC----SSCSHHHHHHH----HHHHHHHTCSEEEEESS-HHHH
T ss_pred CEEEEEECchHHHH-HHHHHHHHHH-c-CCCeEEE-EcC----CCCCHHHHHHH----HHHHhhcCCCEEEEeCC-cHHH
Confidence 78999987764322 5567777775 3 7765221 110 01110000000 001 1246899999999 9999
Q ss_pred HHhhhcc-CCCCcEEEEeC
Q 002281 770 HASNLFR-GAVPPVISFNL 787 (943)
Q Consensus 770 ~Aar~~~-~~~~PVLGIN~ 787 (943)
-+++... ...+|++.|.+
T Consensus 120 D~AK~iA~~~~~p~i~IPT 138 (387)
T 3uhj_A 120 DTAKIVAIDTGARIVIAPT 138 (387)
T ss_dssp HHHHHHHHHTTCEEEECCS
T ss_pred HHHHHHHHhcCCCEEEecC
Confidence 9998754 24689998875
No 159
>3o8l_A 6-phosphofructokinase, muscle type; transferase; HET: ATP ADP; 3.20A {Oryctolagus cuniculus} PDB: 3o8n_A*
Probab=50.12 E-value=7.1 Score=47.49 Aligned_cols=54 Identities=15% Similarity=0.146 Sum_probs=38.1
Q ss_pred cCccEEEEEcCCchHHHHhhhc------cCCCCcEEEEeC-------C---CCcccCCCCchhHHHHHHHHH
Q 002281 754 ERVDFVACLGGDGVILHASNLF------RGAVPPVISFNL-------G---SLGFLTSHPFEDYRQDLRQVI 809 (943)
Q Consensus 754 ~~~DlVIvLGGDGTiL~Aar~~------~~~~~PVLGIN~-------G---sLGFLt~~~~ed~~~~L~~ll 809 (943)
-++|.+|++|||||+-.|..+. ....+||+||-- | ++||-|.. +.+-++++++.
T Consensus 488 ~~Id~LvvIGGdgS~~~a~~L~~~~~~~~~~~i~vvgiPkTIDNDl~gTD~TiGfdTA~--~~~~~aid~i~ 557 (762)
T 3o8l_A 488 FNIQGLVIIGGFEAYTGGLELMEGRKQFDELCIPFVVIPATVSNNVPGSDFSVGADTAL--NTICTTCDRIK 557 (762)
T ss_dssp TTCCCEEEEESHHHHHHHHHHHHHHHHCSTTCSCEEEEEBCTTCCCTTCSCCBTHHHHH--HHHHHHHHHHT
T ss_pred cCCCEEEEeCCchHHHHHHHHHHHHHhccccCCCEEeeccccCCCCCCCcCCCChHHHH--HHHHHHHHHHH
Confidence 3789999999999998876553 234789999953 2 67776653 33455666664
No 160
>3ewn_A THIJ/PFPI family protein; monomer, PSI nysgrc, structural genomics, protein structure initiative; 1.65A {Pseudomonas syringae PV}
Probab=49.83 E-value=36 Score=35.65 Aligned_cols=99 Identities=15% Similarity=0.144 Sum_probs=53.8
Q ss_pred cccCCCEEEEEecCChhHHHHHHHHHHHHhcCCCeEEEEcCChhhhhhcCCCCccceeeeccCccccccCccEEEEEcCC
Q 002281 686 WKTTPRTVLVLKKPGPALMEEAKEVASFLYHQEKMNILVEPDVHDIFARIPGFGFVQTFYLQDTSDLHERVDFVACLGGD 765 (943)
Q Consensus 686 w~~~pk~VlIv~K~~~~~~~~a~~l~~~L~~~~g~~V~ve~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~DlVIvLGGD 765 (943)
|. ..++|+|+.-++-+..+.+ -.++.|....+++|.+-......+....++ ........++....+|+||+-||.
T Consensus 20 ~~-m~~~I~ill~~gf~~~e~~-~p~dvl~~~~~~~v~~vs~~~~~V~~~~G~---~i~~d~~l~~~~~~yD~liVPGG~ 94 (253)
T 3ewn_A 20 WM-GDEQIAMLVYPGMTVMDLV-GPHCMFGSLMGAKIYIVAKSLDPVTSDAGL---AIVPTATFGTCPRDLTVLFAPGGT 94 (253)
T ss_dssp CC-CCCEEEEECCTTBCHHHHH-HHHHHHTTSTTCEEEEEESSSSCEECTTSC---EECCSEETTTSCSSCSEEEECCBS
T ss_pred cC-CCeEEEEEeCCCCcHHHHH-HHHHHHHhCCCCEEEEEeCCCCeEEcCCCC---EEeCCcCHHHcCCCCCEEEECCCc
Confidence 44 3478999988775555443 234445334567665422111111111111 110011123333456999999998
Q ss_pred -ch--------HHHHhhhccCCCCcEEEEeCCC
Q 002281 766 -GV--------ILHASNLFRGAVPPVISFNLGS 789 (943)
Q Consensus 766 -GT--------iL~Aar~~~~~~~PVLGIN~Gs 789 (943)
|+ ++..++.+.....+|.+|-.|.
T Consensus 95 ~g~~~l~~~~~l~~~Lr~~~~~gk~IaaICtG~ 127 (253)
T 3ewn_A 95 DGTLAAASDAETLAFMADRGARAKYITSVCSGS 127 (253)
T ss_dssp HHHHHHTTCHHHHHHHHHHHTTCSEEEEETTHH
T ss_pred cchhhhccCHHHHHHHHHHHHcCCEEEEEChHH
Confidence 75 3455566666788999998875
No 161
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=49.67 E-value=90 Score=27.19 Aligned_cols=99 Identities=15% Similarity=0.212 Sum_probs=53.8
Q ss_pred CEEEEEecCChhHHHHHHHHHHHHhcCCCeEEEEcCChhhhhhcCCCCccceeeeccCccccccCccEEEE----EcCCc
Q 002281 691 RTVLVLKKPGPALMEEAKEVASFLYHQEKMNILVEPDVHDIFARIPGFGFVQTFYLQDTSDLHERVDFVAC----LGGDG 766 (943)
Q Consensus 691 k~VlIv~K~~~~~~~~a~~l~~~L~~~~g~~V~ve~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~DlVIv----LGGDG 766 (943)
++|+||-... ... ..+..+|.+ .|++|..-.+..+.+.... ...+|+||+ =|.||
T Consensus 3 ~~ILivdd~~-~~~---~~l~~~l~~-~g~~v~~~~~~~~al~~l~----------------~~~~dlvllD~~~p~~~g 61 (122)
T 3gl9_A 3 KKVLLVDDSA-VLR---KIVSFNLKK-EGYEVIEAENGQIALEKLS----------------EFTPDLIVLXIMMPVMDG 61 (122)
T ss_dssp CEEEEECSCH-HHH---HHHHHHHHH-TTCEEEEESSHHHHHHHHT----------------TBCCSEEEECSCCSSSCH
T ss_pred ceEEEEeCCH-HHH---HHHHHHHHH-CCcEEEEeCCHHHHHHHHH----------------hcCCCEEEEeccCCCCcH
Confidence 5788875432 222 233444543 4777775555444332110 124677776 36677
Q ss_pred -hHHHHhhhcc-CCCCcEEEEeC-------------CCCcccC-CCCchhHHHHHHHHHc
Q 002281 767 -VILHASNLFR-GAVPPVISFNL-------------GSLGFLT-SHPFEDYRQDLRQVIY 810 (943)
Q Consensus 767 -TiL~Aar~~~-~~~~PVLGIN~-------------GsLGFLt-~~~~ed~~~~L~~ll~ 810 (943)
.+++..+... ...+||+-+.. |--+||. +++++++...++++++
T Consensus 62 ~~~~~~l~~~~~~~~~pii~~s~~~~~~~~~~~~~~Ga~~~l~KP~~~~~L~~~i~~~l~ 121 (122)
T 3gl9_A 62 FTVLKKLQEKEEWKRIPVIVLTAKGGEEDESLALSLGARKVMRKPFSPSQFIEEVKHLLN 121 (122)
T ss_dssp HHHHHHHHTSTTTTTSCEEEEESCCSHHHHHHHHHTTCSEEEESSCCHHHHHHHHHHHHC
T ss_pred HHHHHHHHhcccccCCCEEEEecCCchHHHHHHHhcChhhhccCCCCHHHHHHHHHHHhc
Confidence 3444444322 24678876542 5666766 4677777777776653
No 162
>2pln_A HP1043, response regulator; signaling protein; 1.80A {Helicobacter pylori} PDB: 2hqo_A
Probab=49.24 E-value=56 Score=28.84 Aligned_cols=102 Identities=12% Similarity=0.057 Sum_probs=56.4
Q ss_pred cccCCCEEEEEecCChhHHHHHHHHHHHHhcCCCeEEEEcCChhhhhhcCCCCccceeeeccCccccccCccEEEEEcC-
Q 002281 686 WKTTPRTVLVLKKPGPALMEEAKEVASFLYHQEKMNILVEPDVHDIFARIPGFGFVQTFYLQDTSDLHERVDFVACLGG- 764 (943)
Q Consensus 686 w~~~pk~VlIv~K~~~~~~~~a~~l~~~L~~~~g~~V~ve~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~DlVIvLGG- 764 (943)
|.....+|+||-... .. ...+..+|.. .|++|..-.+..+.+..+ . ...+|+|| +.+
T Consensus 14 ~~~~~~~ilivdd~~-~~---~~~l~~~L~~-~g~~v~~~~~~~~al~~l--------------~--~~~~dlvi-~~~~ 71 (137)
T 2pln_A 14 VPRGSMRVLLIEKNS-VL---GGEIEKGLNV-KGFMADVTESLEDGEYLM--------------D--IRNYDLVM-VSDK 71 (137)
T ss_dssp -CTTCSEEEEECSCH-HH---HHHHHHHHHH-TTCEEEEESCHHHHHHHH--------------H--HSCCSEEE-ECST
T ss_pred cCCCCCeEEEEeCCH-HH---HHHHHHHHHH-cCcEEEEeCCHHHHHHHH--------------H--cCCCCEEE-EcCc
Confidence 345567888885432 22 2234444433 467777555544433210 0 13579999 654
Q ss_pred Cc-hHHHHhhhccCC-CCcEEEEeC-------------CCCcccC-CC-CchhHHHHHHHHHcC
Q 002281 765 DG-VILHASNLFRGA-VPPVISFNL-------------GSLGFLT-SH-PFEDYRQDLRQVIYG 811 (943)
Q Consensus 765 DG-TiL~Aar~~~~~-~~PVLGIN~-------------GsLGFLt-~~-~~ed~~~~L~~ll~G 811 (943)
|| .+++..+.. . .+||+-+.. |-.+||. ++ +.+++...|.+++.+
T Consensus 72 ~g~~~~~~l~~~--~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~kP~~~~~~l~~~i~~~~~~ 133 (137)
T 2pln_A 72 NALSFVSRIKEK--HSSIVVLVSSDNPTSEEEVHAFEQGADDYIAKPYRSIKALVARIEARLRF 133 (137)
T ss_dssp THHHHHHHHHHH--STTSEEEEEESSCCHHHHHHHHHTTCSEEEESSCSCHHHHHHHHHHHTC-
T ss_pred cHHHHHHHHHhc--CCCccEEEEeCCCCHHHHHHHHHcCCceeeeCCCCCHHHHHHHHHHHHhh
Confidence 55 234444443 3 678887642 5667776 46 777787888777654
No 163
>3snk_A Response regulator CHEY-like protein; P-loop containing nucleoside triphosphate hydrolases, struct genomics; 2.02A {Mesorhizobium loti}
Probab=48.72 E-value=87 Score=27.60 Aligned_cols=100 Identities=12% Similarity=0.044 Sum_probs=54.1
Q ss_pred CCEEEEEecCChhHHHHHHHHHHHHhcCCC-eEEEEcCChhhhhhcCCCCccceeeeccCccccccCccEEEEE----cC
Q 002281 690 PRTVLVLKKPGPALMEEAKEVASFLYHQEK-MNILVEPDVHDIFARIPGFGFVQTFYLQDTSDLHERVDFVACL----GG 764 (943)
Q Consensus 690 pk~VlIv~K~~~~~~~~a~~l~~~L~~~~g-~~V~ve~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~DlVIvL----GG 764 (943)
..+|+||-... .. ...+..+|.+ .| ++|..-.+..+.+..+ ....+|+||+= |.
T Consensus 14 ~~~ilivdd~~-~~---~~~l~~~L~~-~g~~~v~~~~~~~~a~~~l----------------~~~~~dlvi~D~~l~~~ 72 (135)
T 3snk_A 14 RKQVALFSSDP-NF---KRDVATRLDA-LAIYDVRVSETDDFLKGPP----------------ADTRPGIVILDLGGGDL 72 (135)
T ss_dssp CEEEEEECSCH-HH---HHHHHHHHHH-TSSEEEEEECGGGGGGCCC----------------TTCCCSEEEEEEETTGG
T ss_pred CcEEEEEcCCH-HH---HHHHHHHHhh-cCCeEEEEeccHHHHHHHH----------------hccCCCEEEEeCCCCCc
Confidence 45788875432 22 2334455544 46 8877555443322111 01347887762 55
Q ss_pred Cc-hHHHHhhhccCCCCcEEEEeC-------------CCCcccC-CCCchhHHHHHHHHHcC
Q 002281 765 DG-VILHASNLFRGAVPPVISFNL-------------GSLGFLT-SHPFEDYRQDLRQVIYG 811 (943)
Q Consensus 765 DG-TiL~Aar~~~~~~~PVLGIN~-------------GsLGFLt-~~~~ed~~~~L~~ll~G 811 (943)
|| .+++..+.... .+||+-+.. |-.+||. +++++++...+++++.|
T Consensus 73 ~g~~~~~~l~~~~~-~~~ii~~s~~~~~~~~~~~~~~g~~~~l~KP~~~~~L~~~i~~~~~~ 133 (135)
T 3snk_A 73 LGKPGIVEARALWA-TVPLIAVSDELTSEQTRVLVRMNASDWLHKPLDGKELLNAVTFHDTG 133 (135)
T ss_dssp GGSTTHHHHHGGGT-TCCEEEEESCCCHHHHHHHHHTTCSEEEESSCCHHHHHHHHHHTC--
T ss_pred hHHHHHHHHHhhCC-CCcEEEEeCCCCHHHHHHHHHcCcHhhccCCCCHHHHHHHHHHHhcc
Confidence 66 35555555433 678876543 5566666 46677777777766554
No 164
>3hl0_A Maleylacetate reductase; structur genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; HET: MSE NAD EPE; 1.60A {Agrobacterium tumefaciens str}
Probab=48.49 E-value=10 Score=41.59 Aligned_cols=84 Identities=19% Similarity=0.172 Sum_probs=49.7
Q ss_pred CCEEEEEecCChhHHHHHHHHHHHHhcCCCeEEEEcCChhhhhhcCCCCccceeeeccCccc-cccCccEEEEEcCCchH
Q 002281 690 PRTVLVLKKPGPALMEEAKEVASFLYHQEKMNILVEPDVHDIFARIPGFGFVQTFYLQDTSD-LHERVDFVACLGGDGVI 768 (943)
Q Consensus 690 pk~VlIv~K~~~~~~~~a~~l~~~L~~~~g~~V~ve~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~DlVIvLGGDGTi 768 (943)
.++++||.-... .....++.+.|.+ .++.++ ..+. ..+....+... .+. ...++|+||.||| |++
T Consensus 34 ~~r~liVtd~~~--~~~~~~v~~~L~~-~~~~v~--~~v~----~~p~~~~v~~~----~~~~~~~~~D~IIavGG-Gs~ 99 (353)
T 3hl0_A 34 LSRALVLSTPQQ--KGDAEALASRLGR-LAAGVF--SEAA----MHTPVEVTKTA----VEAYRAAGADCVVSLGG-GST 99 (353)
T ss_dssp CCCEEEECCGGG--HHHHHHHHHHHGG-GEEEEE--CCCC----TTCBHHHHHHH----HHHHHHTTCSEEEEEES-HHH
T ss_pred CCEEEEEecCch--hhHHHHHHHHHhh-CCcEEe--cCcC----CCCcHHHHHHH----HHHHhccCCCEEEEeCC-cHH
Confidence 467999986553 3456778888864 345443 2211 01110000000 000 1247899999999 999
Q ss_pred HHHhhhcc-CCCCcEEEEeC
Q 002281 769 LHASNLFR-GAVPPVISFNL 787 (943)
Q Consensus 769 L~Aar~~~-~~~~PVLGIN~ 787 (943)
+-+++... ...+|++.|.+
T Consensus 100 iD~aK~iA~~~~~p~i~IPT 119 (353)
T 3hl0_A 100 TGLGKAIALRTDAAQIVIPT 119 (353)
T ss_dssp HHHHHHHHHHHCCEEEEEEC
T ss_pred HHHHHHHHhccCCCEEEEeC
Confidence 99998764 34689998876
No 165
>3opy_A 6-phosphofructo-1-kinase alpha-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}
Probab=47.53 E-value=8 Score=48.17 Aligned_cols=52 Identities=19% Similarity=0.062 Sum_probs=34.2
Q ss_pred CccEEEEEcCCchHHHHhhhccC------CCCcEEEEeC----------CCCcccCCCCchhHHHHHHHH
Q 002281 755 RVDFVACLGGDGVILHASNLFRG------AVPPVISFNL----------GSLGFLTSHPFEDYRQDLRQV 808 (943)
Q Consensus 755 ~~DlVIvLGGDGTiL~Aar~~~~------~~~PVLGIN~----------GsLGFLt~~~~ed~~~~L~~l 808 (943)
++|.+|+||||||+-.|..+... ..+||+||-- =++||-|..+ .+-++++++
T Consensus 688 ~Id~LvvIGGdgS~~~a~~L~~~~~~y~~~~I~vVGIPkTIDNDl~gTD~TiGFdTAvn--~~~eaId~i 755 (989)
T 3opy_A 688 KFDGLIIIGGFEAFTALYELDAARAQYPIFNIPMCCLPATVSNNVPGTEYSLGSDTCLN--TLSGYCDAV 755 (989)
T ss_dssp TCSEEEEEESHHHHHHHHHHHHHTTTCGGGCSCEEEEEBCSSCCCTTCSCCBTHHHHHH--HHHHHHHHH
T ss_pred CCCEEEEeCCchHHHHHHHHHHHHhhCCCcCCcEEeccccccCCCCCCcCCCChHHHHH--HHHHHHHHH
Confidence 78999999999998655544321 3789999953 2677766433 233444444
No 166
>1rhs_A Sulfur-substituted rhodanese; transferase, sulfurtransferase; 1.36A {Bos taurus} SCOP: c.46.1.2 c.46.1.2 PDB: 1boh_A 1boi_A 1orb_A 2ora_A 1dp2_A* 1rhd_A
Probab=47.47 E-value=47 Score=34.79 Aligned_cols=96 Identities=8% Similarity=-0.048 Sum_probs=49.4
Q ss_pred CCCHhhHHHHHHcC----CcEEEEcCCCcccCcchhhhhHHhhhcCCcEEEEEecCCC---------CCCCHHHHHHHHH
Q 002281 274 QVTEEGLKWLMEKG----YKTIVDIRAERVKDNFYEAAIDDAILSGKVELIKIPVEVR---------TAPTMEQVEKFAS 340 (943)
Q Consensus 274 qpT~eDLa~Lk~lG----IKTVIDLRse~~ee~~~~a~e~e~~e~~GI~yIhIPV~d~---------~~Ps~E~v~aFle 340 (943)
.++++++..+.+.+ =-.|||.|..-.. ......+-..-...|. +++|+... ..|+.+.+.+.+.
T Consensus 9 ~is~~~l~~~l~~~~~~~~~~liDvR~~~~~-~~~~~~ey~~gHIpGA--i~ip~~~l~~~~~~~~~~lp~~~~~~~~l~ 85 (296)
T 1rhs_A 9 LVSTKWLAESVRAGKVGPGLRVLDASWYSPG-TREARKEYLERHVPGA--SFFDIEECRDKASPYEVMLPSEAGFADYVG 85 (296)
T ss_dssp EECHHHHHHHHHTTCCBTTEEEEECCCCCTT-SCCHHHHHHHSBCTTC--EECCTTTSSCTTSSSSSCCCCHHHHHHHHH
T ss_pred eeeHHHHHHHHhccccCCCeEEEEecccCcC-CcchhhhHhhCcCCCC--EEeCHHHhcCCCCCCCCCCCCHHHHHHHHH
Confidence 46788887766541 2379999942100 0000011111223443 45666422 2345666666655
Q ss_pred HHhcCCCCcEEEeCcc--CCch-HHHHHHHHHHhcCC
Q 002281 341 LVSNSSKKPLYLHSKE--GVWR-TYAMVSRWRQYMAR 374 (943)
Q Consensus 341 lL~ds~~~PVLVHC~A--GKDR-TGALvaLlr~~lGv 374 (943)
-+.-..+.+|+++|.. |. | +..++.++ ..+|.
T Consensus 86 ~lgi~~~~~vVvyc~~~~g~-~~a~~a~~~L-~~~G~ 120 (296)
T 1rhs_A 86 SLGISNDTHVVVYDGDDLGS-FYAPRVWWMF-RVFGH 120 (296)
T ss_dssp HTTCCTTCEEEEECCCSSSC-SSHHHHHHHH-HHTTC
T ss_pred HcCCCCCCeEEEEcCCCCCc-chHHHHHHHH-HHcCC
Confidence 4322456899999999 76 5 43333333 33454
No 167
>3opy_B 6-phosphofructo-1-kinase beta-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}
Probab=47.45 E-value=8.2 Score=47.95 Aligned_cols=54 Identities=20% Similarity=0.185 Sum_probs=36.3
Q ss_pred cCccEEEEEcCCchHHHHhhhcc------CCCCcEEEEeC-------C---CCcccCCCCchhHHHHHHHHH
Q 002281 754 ERVDFVACLGGDGVILHASNLFR------GAVPPVISFNL-------G---SLGFLTSHPFEDYRQDLRQVI 809 (943)
Q Consensus 754 ~~~DlVIvLGGDGTiL~Aar~~~------~~~~PVLGIN~-------G---sLGFLt~~~~ed~~~~L~~ll 809 (943)
-++|.+|+||||||+-.|..+.. ...+||+||-- | ++||-|..+ .+-++++++.
T Consensus 661 ~~Id~LvvIGGdgS~~~a~~L~~~~~~~~~~~i~vVGIPkTIDNDl~gTD~TiGfdTA~~--~i~eaid~i~ 730 (941)
T 3opy_B 661 YGFDGLILVGGFEAFISLHQLERARINYPSLRIPLVLIPATISNNVPGTEYSLGSDTCLN--SFMEYCDVIK 730 (941)
T ss_dssp TTCSEEEEEESHHHHHHHHHHHHGGGTCGGGCSCEEEEEBCSSCCCTTCSCCBTHHHHHH--HHHHHHHHHH
T ss_pred cCCCEEEEeCCchHHHHHHHHHHHHHhcCccCCcEEeeeccccCCCCCCCCCCChHHHHH--HHHHHHHHHH
Confidence 37899999999999866655432 13689999943 2 778777543 2334555543
No 168
>3jzd_A Iron-containing alcohol dehydrogenase; YP_298327.1, putative alcohol dehedrogenase, structural GENO joint center for structural genomics; HET: MSE NAD PG4 P6G PGE; 2.10A {Ralstonia eutropha}
Probab=46.88 E-value=11 Score=41.61 Aligned_cols=84 Identities=17% Similarity=0.207 Sum_probs=49.6
Q ss_pred CCEEEEEecCChhHHHHHHHHHHHHhcCCCeEEEEcCChhhhhhcCCCCccceeeeccCccc-cccCccEEEEEcCCchH
Q 002281 690 PRTVLVLKKPGPALMEEAKEVASFLYHQEKMNILVEPDVHDIFARIPGFGFVQTFYLQDTSD-LHERVDFVACLGGDGVI 768 (943)
Q Consensus 690 pk~VlIv~K~~~~~~~~a~~l~~~L~~~~g~~V~ve~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~DlVIvLGGDGTi 768 (943)
.++++||.-... .....++.+.|.+. ++.++ ..+. ..|....+... .+. ...++|+||.||| |++
T Consensus 36 ~~r~liVtd~~~--~~~~~~v~~~L~~~-~~~~f--~~v~----~~p~~~~v~~~----~~~~~~~~~D~IIavGG-Gsv 101 (358)
T 3jzd_A 36 AKRALVLCTPNQ--QAEAERIADLLGPL-SAGVY--AGAV----MHVPIESARDA----TARAREAGADCAVAVGG-GST 101 (358)
T ss_dssp CSCEEEECCGGG--HHHHHHHHHHHGGG-EEEEE--CCCC----TTCBHHHHHHH----HHHHHHHTCSEEEEEES-HHH
T ss_pred CCeEEEEeCCcH--HHHHHHHHHHhccC-CEEEe--cCCc----CCCCHHHHHHH----HHHhhccCCCEEEEeCC-cHH
Confidence 368999986542 34567788888643 44443 2211 00110000000 000 1247899999999 999
Q ss_pred HHHhhhcc-CCCCcEEEEeC
Q 002281 769 LHASNLFR-GAVPPVISFNL 787 (943)
Q Consensus 769 L~Aar~~~-~~~~PVLGIN~ 787 (943)
+-+++... ...+|++.|.+
T Consensus 102 iD~aK~iA~~~~~p~i~IPT 121 (358)
T 3jzd_A 102 TGLGKAIALETGMPIVAIPT 121 (358)
T ss_dssp HHHHHHHHHHHCCCEEEEEC
T ss_pred HHHHHHHHhccCCCEEEEeC
Confidence 99998764 34689999876
No 169
>3o8o_A 6-phosphofructokinase subunit alpha; transferase; HET: F6P FDP; 2.90A {Saccharomyces cerevisiae}
Probab=46.04 E-value=8.1 Score=47.15 Aligned_cols=53 Identities=21% Similarity=0.120 Sum_probs=36.3
Q ss_pred cCccEEEEEcCCchHHHHhhhcc------CCCCcEEEEeC-------C---CCcccCCCCchhHHHHHHHH
Q 002281 754 ERVDFVACLGGDGVILHASNLFR------GAVPPVISFNL-------G---SLGFLTSHPFEDYRQDLRQV 808 (943)
Q Consensus 754 ~~~DlVIvLGGDGTiL~Aar~~~------~~~~PVLGIN~-------G---sLGFLt~~~~ed~~~~L~~l 808 (943)
-++|.+|+||||||+-.|..+.. ...+||+||-- | ++||=|..+ .+-++++++
T Consensus 482 ~~Id~LvvIGGdgS~~~a~~L~~~~~~~~~~~i~vIgiPkTIDNDl~gTD~t~GfdTA~~--~~~eaid~i 550 (787)
T 3o8o_A 482 NKLDGLIILGGFEGFRSLKQLRDGRTQHPIFNIPMCLIPATVSNNVPGTEYSLGVDTCLN--ALVNYTDDI 550 (787)
T ss_dssp TTCSEEEEEESHHHHHHHHHHHHHTTTCGGGGSCEEEEEBCTTCCCTTCSCCBTHHHHHH--HHHHHHHHH
T ss_pred hCCCEEEEeCCchHHHHHHHHHHHHHhcCccCCceeecccccccCCCCCcCCCCchHHHH--HHHHHHHHH
Confidence 37899999999999987766542 13689999953 2 677776543 233455544
No 170
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=45.65 E-value=1.2e+02 Score=27.34 Aligned_cols=102 Identities=12% Similarity=0.240 Sum_probs=58.1
Q ss_pred CCEEEEEecCChhHHHHHHHHHHHHhcCCCeEEE-EcCChhhhhhcCCCCccceeeeccCccccccCccEEEE----EcC
Q 002281 690 PRTVLVLKKPGPALMEEAKEVASFLYHQEKMNIL-VEPDVHDIFARIPGFGFVQTFYLQDTSDLHERVDFVAC----LGG 764 (943)
Q Consensus 690 pk~VlIv~K~~~~~~~~a~~l~~~L~~~~g~~V~-ve~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~DlVIv----LGG 764 (943)
..+|+||-... . ....+..+|.+..++.+. .-.+..+.+..+ . ...+|+||+ -+.
T Consensus 5 ~~~ILivdd~~-~---~~~~l~~~L~~~~~~~v~~~~~~~~~a~~~l--------------~--~~~~dlii~D~~l~~~ 64 (153)
T 3cz5_A 5 TARIMLVDDHP-I---VREGYRRLIERRPGYAVVAEAADAGEAYRLY--------------R--ETTPDIVVMDLTLPGP 64 (153)
T ss_dssp CEEEEEECSCH-H---HHHHHHHHHTTSTTEEEEEEESSHHHHHHHH--------------H--TTCCSEEEECSCCSSS
T ss_pred ccEEEEECCcH-H---HHHHHHHHHhhCCCcEEEEEeCCHHHHHHHH--------------h--cCCCCEEEEecCCCCC
Confidence 35788775432 2 233455556443578876 444443332110 0 124677775 244
Q ss_pred Cc-hHHHHhhhccCCCCcEEEEe-------------CCCCcccC-CCCchhHHHHHHHHHcCC
Q 002281 765 DG-VILHASNLFRGAVPPVISFN-------------LGSLGFLT-SHPFEDYRQDLRQVIYGN 812 (943)
Q Consensus 765 DG-TiL~Aar~~~~~~~PVLGIN-------------~GsLGFLt-~~~~ed~~~~L~~ll~G~ 812 (943)
|| .+++..+.. ...+||+-+. .|-.|||. +++.+++...+++++.+.
T Consensus 65 ~g~~~~~~l~~~-~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~kp~~~~~L~~~i~~~~~~~ 126 (153)
T 3cz5_A 65 GGIEATRHIRQW-DGAARILIFTMHQGSAFALKAFEAGASGYVTKSSDPAELVQAIEAILAGR 126 (153)
T ss_dssp CHHHHHHHHHHH-CTTCCEEEEESCCSHHHHHHHHHTTCSEEEETTSCTTHHHHHHHHHTTTC
T ss_pred CHHHHHHHHHHh-CCCCeEEEEECCCCHHHHHHHHHCCCcEEEecCCCHHHHHHHHHHHHhCC
Confidence 65 244554443 2456887664 25677776 478889999999988775
No 171
>3o8o_B 6-phosphofructokinase subunit beta; transferase; HET: F6P FDP; 2.90A {Saccharomyces cerevisiae}
Probab=45.16 E-value=7.6 Score=47.30 Aligned_cols=52 Identities=23% Similarity=0.162 Sum_probs=35.9
Q ss_pred CccEEEEEcCCchHHHHhhhcc------CCCCcEEEEeC-------C---CCcccCCCCchhHHHHHHHH
Q 002281 755 RVDFVACLGGDGVILHASNLFR------GAVPPVISFNL-------G---SLGFLTSHPFEDYRQDLRQV 808 (943)
Q Consensus 755 ~~DlVIvLGGDGTiL~Aar~~~------~~~~PVLGIN~-------G---sLGFLt~~~~ed~~~~L~~l 808 (943)
++|.+|+||||||+-.|..+.. ...+||+||-- | ++||-|..+ .+-++++++
T Consensus 484 ~Id~LvvIGGdgS~~~a~~L~~~~~~~~~~~i~vvgiPkTIDNDl~gTD~T~GfdTA~~--~~~~aid~i 551 (766)
T 3o8o_B 484 EFDGLIIVGGFEAFESLHQLERARESYPAFRIPMVLIPATLSNNVPGTEYSLGSDTALN--ALMEYCDVV 551 (766)
T ss_dssp TCSEEEEEESHHHHHHHHHHHTTTTTCGGGCSCCCEEEBCTTCCCSSCSCCBTHHHHHH--HHHHHHHHH
T ss_pred CCCEEEEeCCchHHHHHHHHHHHHHhcCccCCcEEeeccccccCCCCCCCCCChhHHHH--HHHHHHHHH
Confidence 7899999999999877665532 13689999843 2 678777543 333455544
No 172
>3o8l_A 6-phosphofructokinase, muscle type; transferase; HET: ATP ADP; 3.20A {Oryctolagus cuniculus} PDB: 3o8n_A*
Probab=45.05 E-value=11 Score=45.94 Aligned_cols=55 Identities=15% Similarity=0.266 Sum_probs=37.7
Q ss_pred cCccEEEEEcCCchHHHHhhhc----------------------cCCCCcEEEEeC-------C---CCcccCCCCchhH
Q 002281 754 ERVDFVACLGGDGVILHASNLF----------------------RGAVPPVISFNL-------G---SLGFLTSHPFEDY 801 (943)
Q Consensus 754 ~~~DlVIvLGGDGTiL~Aar~~----------------------~~~~~PVLGIN~-------G---sLGFLt~~~~ed~ 801 (943)
.++|.+|++|||||+-.|..+. ....+||+||-- | ++||-|..+ .+
T Consensus 108 ~~Id~LvvIGGdgS~~gA~~l~~e~~~ll~eL~~~g~i~~~~~~~~~~i~vVGIPkTIDNDl~gTD~TiGfdTA~~--~i 185 (762)
T 3o8l_A 108 RGITNLCVIGGDGSLTGADTFRSEWSDLLSDLQKAGKITAEEATRSSYLNIVGLVGSIDNDFCGTDMTIGTDSALH--RI 185 (762)
T ss_dssp HCCCEEEEEECHHHHHHHHHHHHTTHHHHHHTTTTTSCTTTGGGSTTCCEEEEEEBCTTCCCSSCSCCBTHHHHHH--HH
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHhHHHHHHHHhccchhHHHHhcCCCCCeEEeecCcccCCCCCcCCcCchhHHH--HH
Confidence 3799999999999998776431 124689999842 2 678777543 34
Q ss_pred HHHHHHHHc
Q 002281 802 RQDLRQVIY 810 (943)
Q Consensus 802 ~~~L~~ll~ 810 (943)
.++++++..
T Consensus 186 ~eaid~i~~ 194 (762)
T 3o8l_A 186 TEIVDAITT 194 (762)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHH
Confidence 566666653
No 173
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0
Probab=44.38 E-value=1.1e+02 Score=27.13 Aligned_cols=101 Identities=12% Similarity=0.116 Sum_probs=58.5
Q ss_pred CCEEEEEecCChhHHHHHHHHHHHHhcCCCeEEEEcCChhhhhhcCCCCccceeeeccCccccccCccEEEEE----c--
Q 002281 690 PRTVLVLKKPGPALMEEAKEVASFLYHQEKMNILVEPDVHDIFARIPGFGFVQTFYLQDTSDLHERVDFVACL----G-- 763 (943)
Q Consensus 690 pk~VlIv~K~~~~~~~~a~~l~~~L~~~~g~~V~ve~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~DlVIvL----G-- 763 (943)
..+|+||-... . ....+..+|.+ .|++|..-.+..+.+..+. ...+|+||+= |
T Consensus 6 ~~~ilivdd~~-~---~~~~l~~~L~~-~g~~v~~~~~~~~a~~~l~----------------~~~~dlvi~D~~l~~~~ 64 (136)
T 3kto_A 6 HPIIYLVDHQK-D---ARAALSKLLSP-LDVTIQCFASAESFMRQQI----------------SDDAIGMIIEAHLEDKK 64 (136)
T ss_dssp -CEEEEECSCH-H---HHHHHHHHHTT-SSSEEEEESSHHHHTTSCC----------------CTTEEEEEEETTGGGBT
T ss_pred CCeEEEEcCCH-H---HHHHHHHHHHH-CCcEEEEeCCHHHHHHHHh----------------ccCCCEEEEeCcCCCCC
Confidence 35788885432 1 23345555643 5788876555444332111 1247887762 3
Q ss_pred CCc-hHHHHhhhccCCCCcEEEEeC-------------CCCcccC-CCCchhHHHHHHHHHcCC
Q 002281 764 GDG-VILHASNLFRGAVPPVISFNL-------------GSLGFLT-SHPFEDYRQDLRQVIYGN 812 (943)
Q Consensus 764 GDG-TiL~Aar~~~~~~~PVLGIN~-------------GsLGFLt-~~~~ed~~~~L~~ll~G~ 812 (943)
.|| .+++..+.. ...+||+-+.. |-.+||. +++.+++...++++..+.
T Consensus 65 ~~g~~~~~~l~~~-~~~~~ii~~s~~~~~~~~~~~~~~ga~~~l~KP~~~~~l~~~i~~~~~~~ 127 (136)
T 3kto_A 65 DSGIELLETLVKR-GFHLPTIVMASSSDIPTAVRAMRASAADFIEKPFIEHVLVHDVQQIINGA 127 (136)
T ss_dssp THHHHHHHHHHHT-TCCCCEEEEESSCCHHHHHHHHHTTCSEEEESSBCHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHhC-CCCCCEEEEEcCCCHHHHHHHHHcChHHheeCCCCHHHHHHHHHHHHhcc
Confidence 455 244444443 24678876643 6677776 578888999998888765
No 174
>2iss_D Glutamine amidotransferase subunit PDXT; (beta/alpha)8-barrel, alpha/beta three layer sandwich, lyase transferase; HET: 5RP; 2.90A {Thermotoga maritima}
Probab=44.32 E-value=23 Score=35.44 Aligned_cols=35 Identities=20% Similarity=0.153 Sum_probs=24.9
Q ss_pred cCccEEEEEcCCchHH----------HHhhhccCCCCcEEEEeCC
Q 002281 754 ERVDFVACLGGDGVIL----------HASNLFRGAVPPVISFNLG 788 (943)
Q Consensus 754 ~~~DlVIvLGGDGTiL----------~Aar~~~~~~~PVLGIN~G 788 (943)
.++|.||.-||..+.. ...+.+...++||+||-.|
T Consensus 56 ~~~d~iil~GG~~~~~~~~~~~~~~~~~i~~~~~~g~PilGIC~G 100 (208)
T 2iss_D 56 DMVDGLILPGGESTTMIRILKEMDMDEKLVERINNGLPVFATCAG 100 (208)
T ss_dssp GGCSEEEECSSCHHHHHHHHHHTTCHHHHHHHHHTTCCEEEETHH
T ss_pred hhCCEEEECCCcHHHHHhhhhhhhHHHHHHHHHHCCCeEEEECHH
Confidence 3689999999976643 2334443467899999887
No 175
>1t3k_A Arath CDC25, dual-specificity tyrosine phosphatase; cell cycle, phosphorylation, plant, hydrolase; NMR {Arabidopsis thaliana} SCOP: c.46.1.1
Probab=44.29 E-value=13 Score=35.61 Aligned_cols=73 Identities=19% Similarity=0.182 Sum_probs=38.2
Q ss_pred CCHhhHHHHHHcCCcEEEEcCCCcccCcchhhhhHHhhhcCCcEEEEEecCCCCCCCHHHHHHHHHHHhcCCCCcEEEeC
Q 002281 275 VTEEGLKWLMEKGYKTIVDIRAERVKDNFYEAAIDDAILSGKVELIKIPVEVRTAPTMEQVEKFASLVSNSSKKPLYLHS 354 (943)
Q Consensus 275 pT~eDLa~Lk~lGIKTVIDLRse~~ee~~~~a~e~e~~e~~GI~yIhIPV~d~~~Ps~E~v~aFlelL~ds~~~PVLVHC 354 (943)
++++++..+.+.+=-.|||.|+.+ + |. .-...|. +++|+..... .+.++...+ ..+.||+++|
T Consensus 30 Is~~el~~~l~~~~~~lIDvR~~~-e---y~-----~ghIpgA--inip~~~l~~----~~~~l~~~~--~~~~~iVvyC 92 (152)
T 1t3k_A 30 ITSTQLLPLHRRPNIAIIDVRDEE-R---NY-----DGHIAGS--LHYASGSFDD----KISHLVQNV--KDKDTLVFHS 92 (152)
T ss_dssp ECTTTTTTCCCCTTEEEEEESCSH-H---HH-----SSCCCSS--EEECCSSSST----THHHHHHTC--CSCCEEEESS
T ss_pred ECHHHHHHHhcCCCEEEEECCChh-h---cc-----CccCCCC--EECCHHHHHH----HHHHHHHhc--CCCCEEEEEc
Confidence 355555443322223799999875 1 10 1122333 6778763321 222322222 3567999999
Q ss_pred c-cCCchHHHHH
Q 002281 355 K-EGVWRTYAMV 365 (943)
Q Consensus 355 ~-AGKDRTGALv 365 (943)
. .|. |+...+
T Consensus 93 ~~~G~-rs~~aa 103 (152)
T 1t3k_A 93 ALSQV-RGPTCA 103 (152)
T ss_dssp SCCSS-SHHHHH
T ss_pred CCCCc-chHHHH
Confidence 9 776 765333
No 176
>4dad_A Putative pilus assembly-related protein; response regulator receiver domain, CHEY-related protein, ST genomics; 2.50A {Burkholderia pseudomallei} PDB: 4dn6_A
Probab=43.83 E-value=46 Score=29.79 Aligned_cols=106 Identities=8% Similarity=0.012 Sum_probs=57.3
Q ss_pred ccCCCEEEEEecCChhHHHHHHHHHHHHhcCCCeEEEEcCChhhhhhcCCCCccceeeeccCccccc-cCccEEEE----
Q 002281 687 KTTPRTVLVLKKPGPALMEEAKEVASFLYHQEKMNILVEPDVHDIFARIPGFGFVQTFYLQDTSDLH-ERVDFVAC---- 761 (943)
Q Consensus 687 ~~~pk~VlIv~K~~~~~~~~a~~l~~~L~~~~g~~V~ve~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~DlVIv---- 761 (943)
..+..+|+||-... .. ...+..+|.+..+++|....+..+.+..+ . -. ..+|+||+
T Consensus 17 ~~~~~~ilivdd~~-~~---~~~l~~~L~~~g~~~v~~~~~~~~~~~~~--------------~-~~~~~~dlvi~D~~l 77 (146)
T 4dad_A 17 FQGMINILVASEDA-SR---LAHLARLVGDAGRYRVTRTVGRAAQIVQR--------------T-DGLDAFDILMIDGAA 77 (146)
T ss_dssp CGGGCEEEEECSCH-HH---HHHHHHHHHHHCSCEEEEECCCHHHHTTC--------------H-HHHTTCSEEEEECTT
T ss_pred cCCCCeEEEEeCCH-HH---HHHHHHHHhhCCCeEEEEeCCHHHHHHHH--------------H-hcCCCCCEEEEeCCC
Confidence 33567888885433 22 22344444433237777655443332110 0 01 35788776
Q ss_pred EcCCc-hHHHHhhhccCCCCcEEEEeC-------------CCCcccC-CCCchhHHHHHHHHHcCC
Q 002281 762 LGGDG-VILHASNLFRGAVPPVISFNL-------------GSLGFLT-SHPFEDYRQDLRQVIYGN 812 (943)
Q Consensus 762 LGGDG-TiL~Aar~~~~~~~PVLGIN~-------------GsLGFLt-~~~~ed~~~~L~~ll~G~ 812 (943)
-|.|| .+++..+.. ...+||+-+.. |-.+||. +++.+++...|++++++.
T Consensus 78 ~~~~g~~~~~~l~~~-~~~~~ii~lt~~~~~~~~~~~~~~ga~~~l~Kp~~~~~L~~~i~~~~~~~ 142 (146)
T 4dad_A 78 LDTAELAAIEKLSRL-HPGLTCLLVTTDASSQTLLDAMRAGVRDVLRWPLEPRALDDALKRAAAQC 142 (146)
T ss_dssp CCHHHHHHHHHHHHH-CTTCEEEEEESCCCHHHHHHHHTTTEEEEEESSCCHHHHHHHHHHHHHTC
T ss_pred CCccHHHHHHHHHHh-CCCCcEEEEeCCCCHHHHHHHHHhCCceeEcCCCCHHHHHHHHHHHHhhh
Confidence 24455 234444433 24568876542 5556666 477888888888888765
No 177
>1yt8_A Thiosulfate sulfurtransferase; rhodanase domains, cyanide detoxification, structural genomics, PSI, protein structure initiative; 1.90A {Pseudomonas aeruginosa} SCOP: c.46.1.2 c.46.1.2 c.46.1.2 c.46.1.2
Probab=43.56 E-value=31 Score=39.69 Aligned_cols=75 Identities=9% Similarity=0.046 Sum_probs=43.5
Q ss_pred CCCHhhHHHHHHcCCcEEEEcCCCcccCcchhhhhHHhhhcCCcEEEEEecCCCCCCCHHHHHHHHHHHhcCCCCcEEEe
Q 002281 274 QVTEEGLKWLMEKGYKTIVDIRAERVKDNFYEAAIDDAILSGKVELIKIPVEVRTAPTMEQVEKFASLVSNSSKKPLYLH 353 (943)
Q Consensus 274 qpT~eDLa~Lk~lGIKTVIDLRse~~ee~~~~a~e~e~~e~~GI~yIhIPV~d~~~Ps~E~v~aFlelL~ds~~~PVLVH 353 (943)
.++.+++..+.+.+=-.|||.|+.. + |. .-...|. +++|.. .+...+.-+ ..++||++|
T Consensus 378 ~i~~~~l~~~l~~~~~~liDvR~~~-e---~~-----~ghIpgA--~~ip~~--------~l~~~l~~l--~~~~~ivv~ 436 (539)
T 1yt8_A 378 TIDPTTLADWLGEPGTRVLDFTASA-N---YA-----KRHIPGA--AWVLRS--------QLKQALERL--GTAERYVLT 436 (539)
T ss_dssp EECHHHHHHHTTSTTEEEEECSCHH-H---HH-----HCBCTTC--EECCGG--------GHHHHHHHH--CCCSEEEEE
T ss_pred ccCHHHHHHHhcCCCeEEEEeCCHH-H---hh-----cCcCCCc--hhCCHH--------HHHHHHHhC--CCCCeEEEE
Confidence 3567777666554445799999864 1 11 1122333 344442 333333334 456799999
Q ss_pred CccCCchHHHHHHHHHH
Q 002281 354 SKEGVWRTYAMVSRWRQ 370 (943)
Q Consensus 354 C~AGKDRTGALvaLlr~ 370 (943)
|.+|. |+..++..++.
T Consensus 437 C~sG~-rs~~aa~~L~~ 452 (539)
T 1yt8_A 437 CGSSL-LARFAVAEVQA 452 (539)
T ss_dssp CSSSH-HHHHHHHHHHH
T ss_pred eCCCh-HHHHHHHHHHH
Confidence 99998 87765555543
No 178
>1ujn_A Dehydroquinate synthase; riken structu genomics/proteomics initiative, RSGI, structural genomics,; 1.80A {Thermus thermophilus} SCOP: e.22.1.1
Probab=43.24 E-value=20 Score=39.20 Aligned_cols=88 Identities=13% Similarity=0.007 Sum_probs=48.2
Q ss_pred CCEEEEEecCChhHHHHHHHHHHHHhcCCCeEEEEcCChhhhhhcCCCCccceeeeccCccccccCccEEEEEcCCchHH
Q 002281 690 PRTVLVLKKPGPALMEEAKEVASFLYHQEKMNILVEPDVHDIFARIPGFGFVQTFYLQDTSDLHERVDFVACLGGDGVIL 769 (943)
Q Consensus 690 pk~VlIv~K~~~~~~~~a~~l~~~L~~~~g~~V~ve~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~DlVIvLGGDGTiL 769 (943)
.++++||....- .+...++.+.|. .++.+.+..... .+.+..+......-.+.-..+.|+||.||| |.++
T Consensus 28 ~~kvliVtd~~v--~~~~~~v~~~L~--~~~~~~~~~ge~-----~~~~~~v~~~~~~~~~~~~~r~d~IIavGG-Gsv~ 97 (348)
T 1ujn_A 28 AGPAALLFDRRV--EGFAQEVAKALG--VRHLLGLPGGEA-----AKSLEVYGKVLSWLAEKGLPRNATLLVVGG-GTLT 97 (348)
T ss_dssp SSCEEEEEEGGG--HHHHHHHHHHHT--CCCEEEECCSGG-----GSSHHHHHHHHHHHHHHTCCTTCEEEEEES-HHHH
T ss_pred CCEEEEEECCcH--HHHHHHHHHHhc--cCeEEEECCCCC-----CCCHHHHHHHHHHHHHcCCCCCCEEEEECC-cHHH
Confidence 467899886542 225677777775 345433332111 011100100000000111235699999999 9999
Q ss_pred HHhhhcc---CCCCcEEEEeC
Q 002281 770 HASNLFR---GAVPPVISFNL 787 (943)
Q Consensus 770 ~Aar~~~---~~~~PVLGIN~ 787 (943)
-++.... ...+|++-|-+
T Consensus 98 D~ak~~A~~~~rgip~i~IPT 118 (348)
T 1ujn_A 98 DLGGFVAATYLRGVAYLAFPT 118 (348)
T ss_dssp HHHHHHHHHBTTCCEEEEEEC
T ss_pred HHHHHHHHHhccCCCEEEecC
Confidence 9988765 45788888876
No 179
>2wlr_A Putative thiosulfate sulfurtransferase YNJE; rhodanese domains; HET: EPE; 1.45A {Escherichia coli} PDB: 2wlx_A* 3ipo_A* 3ipp_A
Probab=43.10 E-value=36 Score=37.77 Aligned_cols=83 Identities=12% Similarity=0.001 Sum_probs=45.2
Q ss_pred CCHhhHHHHHHc--------CCcEEEEcC--CCcccCcchhhhhHHhhhcCCcEEEEEecCCCC------CCCHHHHHHH
Q 002281 275 VTEEGLKWLMEK--------GYKTIVDIR--AERVKDNFYEAAIDDAILSGKVELIKIPVEVRT------APTMEQVEKF 338 (943)
Q Consensus 275 pT~eDLa~Lk~l--------GIKTVIDLR--se~~ee~~~~a~e~e~~e~~GI~yIhIPV~d~~------~Ps~E~v~aF 338 (943)
++++.+..+.+. +=-.|||.| +.. + + ..-...|. +++|..... -++.+.+++.
T Consensus 126 i~~~~l~~~~~~~~~~~~~~~~~~liDvR~~~~~-e---~-----~~ghIpgA--~nip~~~~~~~~~~~~~~~~~l~~~ 194 (423)
T 2wlr_A 126 VYPQWLHDLQQGKEVTAKPAGDWKVIEAAWGAPK-L---Y-----LISHIPGA--DYIDTNEVESEPLWNKVSDEQLKAM 194 (423)
T ss_dssp ECHHHHHHHHTTCCCTTCCSSCEEEEEEESSSCS-H---H-----HHCBCTTC--EEEEGGGTEETTTTEECCHHHHHHH
T ss_pred cCHHHHHHHhhccccccccCCCeEEEEecCCCch-h---h-----ccCcCCCc--EEcCHHHhccCCCCCCCCHHHHHHH
Confidence 466666666552 224699999 543 1 1 11223343 456654221 2355666655
Q ss_pred HHHHhcCCCCcEEEeCccCCchHHHHHHHHH
Q 002281 339 ASLVSNSSKKPLYLHSKEGVWRTYAMVSRWR 369 (943)
Q Consensus 339 lelL~ds~~~PVLVHC~AGKDRTGALvaLlr 369 (943)
+.-..-..+.||+++|..|. |+..++..++
T Consensus 195 ~~~~gi~~~~~ivvyC~~G~-~a~~~~~~L~ 224 (423)
T 2wlr_A 195 LAKHGIRHDTTVILYGRDVY-AAARVAQIML 224 (423)
T ss_dssp HHHTTCCTTSEEEEECSSHH-HHHHHHHHHH
T ss_pred HHHcCCCCCCeEEEECCCch-HHHHHHHHHH
Confidence 54321145679999999776 6665544443
No 180
>3clh_A 3-dehydroquinate synthase; shikimate pathway, aromatic amino acid biosynthesis, DHQS, amino-acid biosynthesis, cytoplasm, lyase, NAD; HET: NAD; 2.40A {Helicobacter pylori}
Probab=43.01 E-value=8.6 Score=41.97 Aligned_cols=90 Identities=13% Similarity=0.096 Sum_probs=47.8
Q ss_pred CCEEEEEecCChhHHH-HHHHHHHHHhcCCCeEEEEcCChhhhhhcCCCCccceeeeccCccccccCccEEEEEcCCchH
Q 002281 690 PRTVLVLKKPGPALME-EAKEVASFLYHQEKMNILVEPDVHDIFARIPGFGFVQTFYLQDTSDLHERVDFVACLGGDGVI 768 (943)
Q Consensus 690 pk~VlIv~K~~~~~~~-~a~~l~~~L~~~~g~~V~ve~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~DlVIvLGGDGTi 768 (943)
.++++||.... +.+ ...++.+.|.+. ++.+++-+.... .|.+..+......-.+.-..+.|+||.||| |.+
T Consensus 26 ~~~~livtd~~--v~~~~~~~v~~~L~~~-~~~~~~~~~~e~----~k~~~~v~~~~~~~~~~~~~r~d~iIavGG-Gsv 97 (343)
T 3clh_A 26 KQKALIISDSI--VAGLHLPYLLERLKAL-EVRVCVIESGEK----YKNFHSLERILNNAFEMQLNRHSLMIALGG-GVI 97 (343)
T ss_dssp SSCEEEEEEHH--HHTTTHHHHHTTEECS-CEEEEEECSSGG----GCSHHHHHHHHHHHHHTTCCTTCEEEEEES-HHH
T ss_pred CCEEEEEECCc--HHHHHHHHHHHHHHhC-CcEEEEeCCCCC----CCCHHHHHHHHHHHHhcCCCCCceEEEECC-hHH
Confidence 36788887543 222 356777777543 566554333211 111111100000000011123499999999 999
Q ss_pred HHHhhhcc---CCCCcEEEEeC
Q 002281 769 LHASNLFR---GAVPPVISFNL 787 (943)
Q Consensus 769 L~Aar~~~---~~~~PVLGIN~ 787 (943)
+-++.... ...+|++-|-+
T Consensus 98 ~D~ak~~A~~~~rgip~i~IPT 119 (343)
T 3clh_A 98 SDMVGFASSIYFRGIDFINIPT 119 (343)
T ss_dssp HHHHHHHHHHBTTCCEEEEEEC
T ss_pred HHHHHHHHHHhccCCCEEEeCC
Confidence 99988654 45788887763
No 181
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=42.38 E-value=86 Score=27.88 Aligned_cols=99 Identities=15% Similarity=0.171 Sum_probs=55.6
Q ss_pred CCEEEEEecCChhHHHHHHHHHHHHhcCCCeEEEEcCChhhhhhcCCCCccceeeeccCccccccCccEEEE---E--cC
Q 002281 690 PRTVLVLKKPGPALMEEAKEVASFLYHQEKMNILVEPDVHDIFARIPGFGFVQTFYLQDTSDLHERVDFVAC---L--GG 764 (943)
Q Consensus 690 pk~VlIv~K~~~~~~~~a~~l~~~L~~~~g~~V~ve~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~DlVIv---L--GG 764 (943)
..+|+||-... .. ...+..+|.+ .|++|..-.+..+.+..+ .-...+|+||+ + |.
T Consensus 5 ~~~ilivdd~~-~~---~~~l~~~L~~-~g~~v~~~~~~~~a~~~l---------------~~~~~~dlvi~D~~l~~~~ 64 (140)
T 3h5i_A 5 DKKILIVEDSK-FQ---AKTIANILNK-YGYTVEIALTGEAAVEKV---------------SGGWYPDLILMDIELGEGM 64 (140)
T ss_dssp -CEEEEECSCH-HH---HHHHHHHHHH-TTCEEEEESSHHHHHHHH---------------HTTCCCSEEEEESSCSSSC
T ss_pred CcEEEEEeCCH-HH---HHHHHHHHHH-cCCEEEEecChHHHHHHH---------------hcCCCCCEEEEeccCCCCC
Confidence 46788885432 22 2334445543 477776555444332210 00135788876 2 46
Q ss_pred Cc-hHHHHhhhccCCCCcEEEEeC-------------CCCcccC-CCCchhHHHHHHHHHc
Q 002281 765 DG-VILHASNLFRGAVPPVISFNL-------------GSLGFLT-SHPFEDYRQDLRQVIY 810 (943)
Q Consensus 765 DG-TiL~Aar~~~~~~~PVLGIN~-------------GsLGFLt-~~~~ed~~~~L~~ll~ 810 (943)
|| .+++..+.. ..+||+-+.. |-.+||. +++.+++...++++++
T Consensus 65 ~g~~~~~~l~~~--~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~i~~~l~ 123 (140)
T 3h5i_A 65 DGVQTALAIQQI--SELPVVFLTAHTEPAVVEKIRSVTAYGYVMKSATEQVLITIVEMALR 123 (140)
T ss_dssp CHHHHHHHHHHH--CCCCEEEEESSSSCCCCGGGGGSCEEEEEETTCCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhC--CCCCEEEEECCCCHHHHHHHHhCCCcEEEeCCCCHHHHHHHHHHHHH
Confidence 77 355555554 4678876643 4556665 5778888888887765
No 182
>1okg_A Possible 3-mercaptopyruvate sulfurtransferase; rhodanese, prolyl isomerase, catalytic triad, serine protease, leishmania pyruvate; HET: CSR; 2.10A {Leishmania major} SCOP: c.46.1.2 c.46.1.2 d.26.1.3
Probab=42.26 E-value=33 Score=37.87 Aligned_cols=82 Identities=12% Similarity=0.022 Sum_probs=41.4
Q ss_pred CCHhhHHHHHHcCCcEEEEcCCCcccCcchhhhhHHhhhcCCcEEEEEecCC-C-----------CCCCHHHHHHHHHHH
Q 002281 275 VTEEGLKWLMEKGYKTIVDIRAERVKDNFYEAAIDDAILSGKVELIKIPVEV-R-----------TAPTMEQVEKFASLV 342 (943)
Q Consensus 275 pT~eDLa~Lk~lGIKTVIDLRse~~ee~~~~a~e~e~~e~~GI~yIhIPV~d-~-----------~~Ps~E~v~aFlelL 342 (943)
++++++..+.+. -.|||.|... ..+.....+-..-...|. +++|+.. . ..|+.+.+.+.+.-+
T Consensus 16 Is~~el~~~l~~--~~iIDvR~~~-~~~~~~~~ey~~gHIpGA--i~ip~~~~l~~~~~~~~~~~~lp~~~~f~~~l~~~ 90 (373)
T 1okg_A 16 LDPSEVADHLAE--YRIVDCRYSL-KIKDHGSIQYAKEHVKSA--IRADVDTNLSKLVPTSTARHPLPPXAEFIDWCMAN 90 (373)
T ss_dssp ECHHHHTTCGGG--SEEEECCCCS-SSTTTTTTHHHHCEETTC--EECCTTTTSCCCCTTCCCSSCCCCHHHHHHHHHHT
T ss_pred EcHHHHHHHcCC--cEEEEecCCc-cccccchhHHhhCcCCCC--EEeCchhhhhcccccCCccccCCCHHHHHHHHHHc
Confidence 455555443333 5799999842 000000011111223343 4566542 1 124556666555433
Q ss_pred hcCCCCcEEEeC-ccCCchHH
Q 002281 343 SNSSKKPLYLHS-KEGVWRTY 362 (943)
Q Consensus 343 ~ds~~~PVLVHC-~AGKDRTG 362 (943)
.-..+.||+++| ..|. |+.
T Consensus 91 gi~~d~~VVvYc~~~G~-rsa 110 (373)
T 1okg_A 91 GMAGELPVLCYDDECGA-MGG 110 (373)
T ss_dssp TCSSSSCEEEECSSTTT-TTH
T ss_pred CCCCCCeEEEEeCCCCc-hHH
Confidence 224568999999 7776 765
No 183
>1ta9_A Glycerol dehydrogenase; oxidoredu; 1.90A {Schizosaccharomyces pombe}
Probab=41.00 E-value=31 Score=39.20 Aligned_cols=82 Identities=12% Similarity=0.168 Sum_probs=48.9
Q ss_pred CEEEEEecCChhHHHHHHHHHHHHhcCCCeEEE---EcCChhhhhhcCCCCccceeeeccCccccccCccEEEEEcCCch
Q 002281 691 RTVLVLKKPGPALMEEAKEVASFLYHQEKMNIL---VEPDVHDIFARIPGFGFVQTFYLQDTSDLHERVDFVACLGGDGV 767 (943)
Q Consensus 691 k~VlIv~K~~~~~~~~a~~l~~~L~~~~g~~V~---ve~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~DlVIvLGGDGT 767 (943)
++++||....-.. ....++.+.|.+ .++++. +..+ +....+.... +.+.+++|+||.||| |+
T Consensus 92 ~rvlIVtd~~~~~-~~~~~v~~~L~~-~gi~~~~~~~~ge--------~~~~~v~~~~----~~~~~~~D~IIAvGG-GS 156 (450)
T 1ta9_A 92 KSAVVLADQNVWN-ICANKIVDSLSQ-NGMTVTKLVFGGE--------ASLVELDKLR----KQCPDDTQVIIGVGG-GK 156 (450)
T ss_dssp SEEEEEEEHHHHH-HTHHHHHHHHHH-TTCEEEEEEECSC--------CCHHHHHHHH----TTSCTTCCEEEEEES-HH
T ss_pred CEEEEEECccHHH-HHHHHHHHHHHH-CCCeEEEEeeCCC--------CCHHHHHHHH----HHHhhCCCEEEEeCC-cH
Confidence 4899998644211 246778888854 466652 2211 1100011000 011117899999999 99
Q ss_pred HHHHhhhccC-CCCcEEEEeC
Q 002281 768 ILHASNLFRG-AVPPVISFNL 787 (943)
Q Consensus 768 iL~Aar~~~~-~~~PVLGIN~ 787 (943)
++-+++.... ..+|++.|-+
T Consensus 157 viD~AK~iA~~~giP~I~IPT 177 (450)
T 1ta9_A 157 TMDSAKYIAHSMNLPSIICPT 177 (450)
T ss_dssp HHHHHHHHHHHTTCCEEEEES
T ss_pred HHHHHHHHHHhcCCCEEEEeC
Confidence 9999987642 4689998875
No 184
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=40.84 E-value=1.1e+02 Score=27.17 Aligned_cols=102 Identities=14% Similarity=0.265 Sum_probs=57.9
Q ss_pred CCEEEEEecCChhHHHHHHHHHHHHhcCCCeEEEEcCChhhhhhcCCCCccceeeeccCccccccCccEEEEE----cCC
Q 002281 690 PRTVLVLKKPGPALMEEAKEVASFLYHQEKMNILVEPDVHDIFARIPGFGFVQTFYLQDTSDLHERVDFVACL----GGD 765 (943)
Q Consensus 690 pk~VlIv~K~~~~~~~~a~~l~~~L~~~~g~~V~ve~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~DlVIvL----GGD 765 (943)
+.+|+||-... .. ...+..+|.+ .|++|..-.+..+.+..+ ....+|+||+= |.|
T Consensus 4 ~~~iLivdd~~-~~---~~~l~~~L~~-~g~~v~~~~~~~~al~~~----------------~~~~~dlvl~D~~lp~~~ 62 (136)
T 3t6k_A 4 PHTLLIVDDDD-TV---AEMLELVLRG-AGYEVRRAASGEEALQQI----------------YKNLPDALICDVLLPGID 62 (136)
T ss_dssp CCEEEEECSCH-HH---HHHHHHHHHH-TTCEEEEESSHHHHHHHH----------------HHSCCSEEEEESCCSSSC
T ss_pred CCEEEEEeCCH-HH---HHHHHHHHHH-CCCEEEEeCCHHHHHHHH----------------HhCCCCEEEEeCCCCCCC
Confidence 45788875432 22 2234444543 477777555544332210 01346877762 667
Q ss_pred c-hHHHHhhhcc-CCCCcEEEEeC-------------CCCcccC-CCCchhHHHHHHHHHcCC
Q 002281 766 G-VILHASNLFR-GAVPPVISFNL-------------GSLGFLT-SHPFEDYRQDLRQVIYGN 812 (943)
Q Consensus 766 G-TiL~Aar~~~-~~~~PVLGIN~-------------GsLGFLt-~~~~ed~~~~L~~ll~G~ 812 (943)
| .+++..+... ...+||+-+.. |-.+||. +++.+++...+++++.+.
T Consensus 63 g~~~~~~lr~~~~~~~~pii~~t~~~~~~~~~~~~~~ga~~~l~KP~~~~~L~~~i~~~l~~~ 125 (136)
T 3t6k_A 63 GYTLCKRVRQHPLTKTLPILMLTAQGDISAKIAGFEAGANDYLAKPFEPQELVYRVKNILART 125 (136)
T ss_dssp HHHHHHHHHHSGGGTTCCEEEEECTTCHHHHHHHHHHTCSEEEETTCCHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHcCCCcCCccEEEEecCCCHHHHHHHHhcCcceEEeCCCCHHHHHHHHHHHHhcc
Confidence 7 3455554421 24578876542 6677777 578888999998888654
No 185
>3tn4_A Phosphotriesterase; lactonase, hydrolase; HET: KCX; 1.50A {Geobacillus kaustophilus} PDB: 3tnb_A* 3tn3_A* 3tn5_A* 3tn6_A* 3ojg_A* 3orw_A* 3f4c_A* 3f4d_A*
Probab=40.82 E-value=86 Score=34.67 Aligned_cols=41 Identities=17% Similarity=0.207 Sum_probs=24.8
Q ss_pred hhHHHHHHcCCcEEEEcCCCcccCcchhhhhHHhhhcCCcEEE
Q 002281 278 EGLKWLMEKGYKTIVDIRAERVKDNFYEAAIDDAILSGKVELI 320 (943)
Q Consensus 278 eDLa~Lk~lGIKTVIDLRse~~ee~~~~a~e~e~~e~~GI~yI 320 (943)
++++.++++|++||||........ .+...++..+.-|++.|
T Consensus 87 ~~l~~~k~~Gg~tIVd~T~~g~GR--d~~~l~~is~~tGv~IV 127 (360)
T 3tn4_A 87 EAAEKMKRHGIQTVVDPTPNDCGR--NPAFLRRVAEETGLNII 127 (360)
T ss_dssp HHHHHHHHTTCCEEEECCCTTTTC--CHHHHHHHHHHHCCEEE
T ss_pred HHHHHHHhcCCCeEEECCCCCcCc--CHHHHHHHHHHcCCCEE
Confidence 456778889999999998765211 11223344445565554
No 186
>3m3p_A Glutamine amido transferase; structural genomics, nysgrc, PSI-2; HET: MSE; 1.30A {Methylobacillus flagellatus} PDB: 3l83_A*
Probab=40.79 E-value=14 Score=38.69 Aligned_cols=36 Identities=25% Similarity=0.205 Sum_probs=24.6
Q ss_pred cCccEEEEEcCCchH----------HHHhhhccCCCCcEEEEeCCC
Q 002281 754 ERVDFVACLGGDGVI----------LHASNLFRGAVPPVISFNLGS 789 (943)
Q Consensus 754 ~~~DlVIvLGGDGTi----------L~Aar~~~~~~~PVLGIN~Gs 789 (943)
.++|.+|+.||-++. +...+.+...++|||||-+|.
T Consensus 47 ~~~d~lIl~GGp~~~~d~~~~~~~~~~~i~~~~~~~~PvlGIC~G~ 92 (250)
T 3m3p_A 47 RDCSGLAMMGGPMSANDDLPWMPTLLALIRDAVAQRVPVIGHCLGG 92 (250)
T ss_dssp GGSSEEEECCCSSCTTSCCTTHHHHHHHHHHHHHHTCCEEEETHHH
T ss_pred ccCCEEEECCCCCcccccchHHHHHHHHHHHHHHcCCCEEEECHHH
Confidence 468999999997652 222233333478999998873
No 187
>3o8o_A 6-phosphofructokinase subunit alpha; transferase; HET: F6P FDP; 2.90A {Saccharomyces cerevisiae}
Probab=40.27 E-value=14 Score=45.04 Aligned_cols=44 Identities=18% Similarity=0.281 Sum_probs=31.3
Q ss_pred cCccEEEEEcCCchHHHHhhhc----------------------cCCCCcEEEEeC-------C---CCcccCCCC
Q 002281 754 ERVDFVACLGGDGVILHASNLF----------------------RGAVPPVISFNL-------G---SLGFLTSHP 797 (943)
Q Consensus 754 ~~~DlVIvLGGDGTiL~Aar~~----------------------~~~~~PVLGIN~-------G---sLGFLt~~~ 797 (943)
.++|.+|+||||||+-.|..+. ....+||+||-- | ++||-|..+
T Consensus 98 ~~Id~LvvIGGdgS~~~A~~l~~e~~~l~~eL~~~~~is~e~~~~~~~i~vVGIPkTIDNDl~gTD~TiGfdTAl~ 173 (787)
T 3o8o_A 98 QGIDALVVCGGDGSLTGADLFRHEWPSLVDELVAEGRFTKEEVAPYKNLSIVGLVGSIDNDMSGTDSTIGAYSALE 173 (787)
T ss_dssp HTEEEEEEEECHHHHHHHHHHHTTHHHHHHHHHSSSSCCTTTTTTTCSCEEEEEEEESSCCCTTSSCCEEHHHHHH
T ss_pred cCCCEEEEeCCCchHHHHHHHHHhhHHHHHHHHhcccccHHHHhcCCCCcEEEEeecCcCCCCCCCCCCCcHHHHH
Confidence 4689999999999987764321 113689999842 2 788877654
No 188
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=40.24 E-value=92 Score=33.01 Aligned_cols=60 Identities=22% Similarity=0.241 Sum_probs=45.8
Q ss_pred CccccccCccEEEEEcCCchHHHHhhhccCCCCcEEEEeCC-------------CCcccCCC---CchhHHHHHHHHHcC
Q 002281 748 DTSDLHERVDFVACLGGDGVILHASNLFRGAVPPVISFNLG-------------SLGFLTSH---PFEDYRQDLRQVIYG 811 (943)
Q Consensus 748 ~~~~l~~~~DlVIvLGGDGTiL~Aar~~~~~~~PVLGIN~G-------------sLGFLt~~---~~ed~~~~L~~ll~G 811 (943)
+..++...+|++|+-||=+|++.|... ++|++.+..+ ..|++.+. +++++.+++.++++.
T Consensus 301 ~~~~~l~~ad~~v~~~g~~t~~Ea~a~----G~P~v~~p~~~~q~~~~~~v~~~g~g~~~~~~~~~~~~l~~ai~~ll~~ 376 (412)
T 3otg_A 301 PQAALLPHVDLVVHHGGSGTTLGALGA----GVPQLSFPWAGDSFANAQAVAQAGAGDHLLPDNISPDSVSGAAKRLLAE 376 (412)
T ss_dssp CHHHHGGGCSEEEESCCHHHHHHHHHH----TCCEEECCCSTTHHHHHHHHHHHTSEEECCGGGCCHHHHHHHHHHHHHC
T ss_pred CHHHHHhcCcEEEECCchHHHHHHHHh----CCCEEecCCchhHHHHHHHHHHcCCEEecCcccCCHHHHHHHHHHHHhC
Confidence 345667789999999999999998765 5799987553 35777654 677888888888754
No 189
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=40.19 E-value=1.7e+02 Score=26.19 Aligned_cols=106 Identities=18% Similarity=0.191 Sum_probs=58.0
Q ss_pred cccCCCEEEEEecCChhHHHHHHHHHHHHhcCCC-eEEEEcCChhhhhhcCCCCccceeeeccCccccccCccEEEE---
Q 002281 686 WKTTPRTVLVLKKPGPALMEEAKEVASFLYHQEK-MNILVEPDVHDIFARIPGFGFVQTFYLQDTSDLHERVDFVAC--- 761 (943)
Q Consensus 686 w~~~pk~VlIv~K~~~~~~~~a~~l~~~L~~~~g-~~V~ve~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~DlVIv--- 761 (943)
+.....+|+||-... .. ...+..+|....+ ..|..-.+..+.+..+. ...+|+||+
T Consensus 16 ~~~~m~~iLivdd~~-~~---~~~l~~~L~~~~~~~~v~~~~~~~~al~~l~----------------~~~~dlii~D~~ 75 (150)
T 4e7p_A 16 PRGSHMKVLVAEDQS-ML---RDAMCQLLTLQPDVESVLQAKNGQEAIQLLE----------------KESVDIAILDVE 75 (150)
T ss_dssp ----CEEEEEECSCH-HH---HHHHHHHHHTSTTEEEEEEESSHHHHHHHHT----------------TSCCSEEEECSS
T ss_pred CCCCccEEEEEcCCH-HH---HHHHHHHHHhCCCcEEEEEECCHHHHHHHhh----------------ccCCCEEEEeCC
Confidence 344556888886432 22 2334555543322 45555455444332111 124677775
Q ss_pred -EcCCc-hHHHHhhhccCCCCcEEEEeC-------------CCCcccC-CCCchhHHHHHHHHHcCC
Q 002281 762 -LGGDG-VILHASNLFRGAVPPVISFNL-------------GSLGFLT-SHPFEDYRQDLRQVIYGN 812 (943)
Q Consensus 762 -LGGDG-TiL~Aar~~~~~~~PVLGIN~-------------GsLGFLt-~~~~ed~~~~L~~ll~G~ 812 (943)
-++|| .+++..+.. ...+||+-+.. |-.+||. +++.+++...|++++++.
T Consensus 76 l~~~~g~~~~~~l~~~-~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~Kp~~~~~l~~~i~~~~~~~ 141 (150)
T 4e7p_A 76 MPVKTGLEVLEWIRSE-KLETKVVVVTTFKRAGYFERAVKAGVDAYVLKERSIADLMQTLHTVLEGR 141 (150)
T ss_dssp CSSSCHHHHHHHHHHT-TCSCEEEEEESCCCHHHHHHHHHTTCSEEEETTSCHHHHHHHHHHHHTTC
T ss_pred CCCCcHHHHHHHHHHh-CCCCeEEEEeCCCCHHHHHHHHHCCCcEEEecCCCHHHHHHHHHHHHcCC
Confidence 24555 344444442 34678876643 5667776 578889999999999876
No 190
>3opy_B 6-phosphofructo-1-kinase beta-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}
Probab=39.33 E-value=15 Score=45.72 Aligned_cols=55 Identities=15% Similarity=0.135 Sum_probs=36.9
Q ss_pred cCccEEEEEcCCchHHHHhhhc----------------------cCCCCcEEEEeC-------C---CCcccCCCCchhH
Q 002281 754 ERVDFVACLGGDGVILHASNLF----------------------RGAVPPVISFNL-------G---SLGFLTSHPFEDY 801 (943)
Q Consensus 754 ~~~DlVIvLGGDGTiL~Aar~~----------------------~~~~~PVLGIN~-------G---sLGFLt~~~~ed~ 801 (943)
.++|.+|+||||||+-.|..+. ....+||+||-- | ++||-|..+ .+
T Consensus 275 ~gId~LvvIGGDGS~~gA~~l~~e~~~l~~eL~~~gkis~e~~~~~~~i~VVGIPkTIDNDl~gTD~TiGfdTAv~--~i 352 (941)
T 3opy_B 275 MGIDALIVCGGDGSLTGADRFRSEWPSLIEELLQTEQISQQQFNTHQNLNICGAVGSIDNDMSSTDATIGAFSSLD--RI 352 (941)
T ss_dssp HTCCEEEEEECHHHHHHHHHHHHTCCCCCCC--------CHHHHHTCSCEEEEEEEESSCCCSSCSSCEEHHHHHH--HH
T ss_pred cCCCEEEEeCCChhHHHHHHHHHhhhHHHHHHHhhccccHHHHhcCCCCcEEEEeecccCCCCCCCCCCChHHHHH--HH
Confidence 3789999999999998775421 123689999842 2 678777543 34
Q ss_pred HHHHHHHHc
Q 002281 802 RQDLRQVIY 810 (943)
Q Consensus 802 ~~~L~~ll~ 810 (943)
-++++++..
T Consensus 353 ~eaId~I~~ 361 (941)
T 3opy_B 353 CRAIDYIDA 361 (941)
T ss_dssp HHHHHHHHS
T ss_pred HHHHHHHHh
Confidence 456666643
No 191
>3opy_A 6-phosphofructo-1-kinase alpha-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}
Probab=39.17 E-value=15 Score=45.83 Aligned_cols=55 Identities=16% Similarity=0.179 Sum_probs=36.4
Q ss_pred cCccEEEEEcCCchHHHHhhhc----------c------------CCCCcEEEEeC-------C---CCcccCCCCchhH
Q 002281 754 ERVDFVACLGGDGVILHASNLF----------R------------GAVPPVISFNL-------G---SLGFLTSHPFEDY 801 (943)
Q Consensus 754 ~~~DlVIvLGGDGTiL~Aar~~----------~------------~~~~PVLGIN~-------G---sLGFLt~~~~ed~ 801 (943)
.++|.+|+||||||+-.|..+. . ...+||+||-- | ++||-|..+ .+
T Consensus 303 ~gId~LvvIGGDGS~~gA~~L~~e~~~l~~eL~~~gkls~~~~~~~~~i~VVGIPkTIDNDl~gTD~TiGFdTAl~--~i 380 (989)
T 3opy_A 303 NGIDALVVCGGDGSLTGADLFRKEWPELIKELLGEDKITKEQYETHRNLTIVGLVGSIDNDMCGTDSTIGAYSSLE--RI 380 (989)
T ss_dssp TTCCEEEEEECHHHHHHHHHHHHHTTCCCCC--------CHHHHHTTSCEEEEEEEESSCCCTTCSCCEEHHHHHH--HH
T ss_pred cCCCEEEEeCCChhhHHHHHHHHHhhHHHHHHHHccccchhhhhccCCCcEEEEeecccCCCCCCCCCCChhhHHH--HH
Confidence 4789999999999987765421 0 14689999842 2 678777543 33
Q ss_pred HHHHHHHHc
Q 002281 802 RQDLRQVIY 810 (943)
Q Consensus 802 ~~~L~~ll~ 810 (943)
-++++++..
T Consensus 381 ~eaId~I~~ 389 (989)
T 3opy_A 381 IELVDYIDA 389 (989)
T ss_dssp HHHHHHHHS
T ss_pred HHHHHHHHh
Confidence 455555543
No 192
>1ohe_A CDC14B, CDC14B2 phosphatase; protein phosphatase, cell cycle, hydrolase; HET: SEP; 2.20A {Homo sapiens} SCOP: c.45.1.1 c.45.1.1 PDB: 1ohc_A 1ohd_A
Probab=38.83 E-value=50 Score=36.25 Aligned_cols=60 Identities=12% Similarity=0.113 Sum_probs=40.1
Q ss_pred CCCCCCHHHHHHHHHHHh----c-CCCCcEEEeCccCCchHH----HHHHHHHH-hcCCCHHHHHHHhhc
Q 002281 326 VRTAPTMEQVEKFASLVS----N-SSKKPLYLHSKEGVWRTY----AMVSRWRQ-YMARCASQISGQTIT 385 (943)
Q Consensus 326 d~~~Ps~E~v~aFlelL~----d-s~~~PVLVHC~AGKDRTG----ALvaLlr~-~lGvs~edAiaDYLl 385 (943)
|...+...++-.|...+. + .....+++||+.|..|.- .|+++|+. ++|++.++|+.....
T Consensus 50 dfgp~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~~~r~naa~L~~~y~~~~~~~~~~~a~~~~~~ 119 (348)
T 1ohe_A 50 DFGPLNLAMVYRYCCKINKKLKSITMLRKKIVHFTGSDQRKQANAAFLVGCYMVIYLGRTPEEAYRILIF 119 (348)
T ss_dssp CCCCCCHHHHHHHHHHHHHHHHCGGGTTSEEEEEECSCHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHTT
T ss_pred hcCCccHHHHHHHHHHHHHHHhChhhcCCEEEEECCCCchHHHHHHHHHHHHHHHhcCCCHHHHHHHHHh
Confidence 455667788777766543 2 124678999999986433 44444443 489999999886553
No 193
>3qbe_A 3-dehydroquinate synthase; shikimate pathway, mycobacte tuberculosis, nicotinamide adenine dinucleotide (NAD)-depen enzyme; 2.07A {Mycobacterium tuberculosis} PDB: 3qbd_A
Probab=38.65 E-value=26 Score=39.00 Aligned_cols=89 Identities=19% Similarity=0.197 Sum_probs=49.9
Q ss_pred CEEEEEecCChhHHHHHHHHHHHHhcCCCeEE--EEcCChhhhhhcCCCCccceeeeccCccccccCccEEEEEcCCchH
Q 002281 691 RTVLVLKKPGPALMEEAKEVASFLYHQEKMNI--LVEPDVHDIFARIPGFGFVQTFYLQDTSDLHERVDFVACLGGDGVI 768 (943)
Q Consensus 691 k~VlIv~K~~~~~~~~a~~l~~~L~~~~g~~V--~ve~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~DlVIvLGGDGTi 768 (943)
++++||.-..- .+...++.+.|.+ .|+++ ++-+.... .+.+..+......-.+.-..+.|+||.||| |.+
T Consensus 44 ~rvlIVtd~~v--~~~~~~v~~~L~~-~g~~~~~~~~~~gE~----~kt~~~v~~~~~~l~~~~~~r~d~IIavGG-Gsv 115 (368)
T 3qbe_A 44 HKVAVVHQPGL--AETAEEIRKRLAG-KGVDAHRIEIPDAEA----GKDLPVVGFIWEVLGRIGIGRKDALVSLGG-GAA 115 (368)
T ss_dssp SEEEEEECGGG--HHHHHHHHHHHHH-TTCEEEEEECCSGGG----GGBHHHHHHHHHHHHHHTCCTTCEEEEEES-HHH
T ss_pred CEEEEEECccH--HHHHHHHHHHHHh-cCCcceEEEeCCCCC----CCCHHHHHHHHHHHHHcCCCCCcEEEEECC-hHH
Confidence 89999987663 2336778888865 46664 33222211 000000000000000111235799999999 999
Q ss_pred HHHhhhcc---CCCCcEEEEeC
Q 002281 769 LHASNLFR---GAVPPVISFNL 787 (943)
Q Consensus 769 L~Aar~~~---~~~~PVLGIN~ 787 (943)
+-++.... ...+|++-|-+
T Consensus 116 ~D~ak~~Aa~~~rgip~i~IPT 137 (368)
T 3qbe_A 116 TDVAGFAAATWLRGVSIVHLPT 137 (368)
T ss_dssp HHHHHHHHHHGGGCCEEEEEEC
T ss_pred HHHHHHHHHHhccCCcEEEECC
Confidence 99888654 24678877765
No 194
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=38.44 E-value=1.1e+02 Score=26.58 Aligned_cols=97 Identities=13% Similarity=0.191 Sum_probs=51.0
Q ss_pred CEEEEEecCChhHHHHHHHHHHHHhcCCCeEEEEcCChhhhhhcCCCCccceeeeccCccccccCccEEEEE----cCCc
Q 002281 691 RTVLVLKKPGPALMEEAKEVASFLYHQEKMNILVEPDVHDIFARIPGFGFVQTFYLQDTSDLHERVDFVACL----GGDG 766 (943)
Q Consensus 691 k~VlIv~K~~~~~~~~a~~l~~~L~~~~g~~V~ve~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~DlVIvL----GGDG 766 (943)
++|+||-... .. ...+..+|.+ .|++|..-.+..+.+.... ...+|+||+= |+||
T Consensus 3 ~~ilivdd~~-~~---~~~l~~~L~~-~g~~v~~~~~~~~al~~~~----------------~~~~dlii~D~~~p~~~g 61 (120)
T 3f6p_A 3 KKILVVDDEK-PI---ADILEFNLRK-EGYEVHCAHDGNEAVEMVE----------------ELQPDLILLDIMLPNKDG 61 (120)
T ss_dssp CEEEEECSCH-HH---HHHHHHHHHH-TTCEEEEESSHHHHHHHHH----------------TTCCSEEEEETTSTTTHH
T ss_pred CeEEEEECCH-HH---HHHHHHHHHh-CCEEEEEeCCHHHHHHHHh----------------hCCCCEEEEeCCCCCCCH
Confidence 5788875432 22 2233344443 4777765444433322110 1246877762 5566
Q ss_pred -hHHHHhhhccCCCCcEEEEeC-------------CCCcccC-CCCchhHHHHHHHHHc
Q 002281 767 -VILHASNLFRGAVPPVISFNL-------------GSLGFLT-SHPFEDYRQDLRQVIY 810 (943)
Q Consensus 767 -TiL~Aar~~~~~~~PVLGIN~-------------GsLGFLt-~~~~ed~~~~L~~ll~ 810 (943)
.+++..+. ....||+-+.. |-.+||. +++.+++...+++++.
T Consensus 62 ~~~~~~lr~--~~~~~ii~~t~~~~~~~~~~~~~~ga~~~l~KP~~~~~l~~~i~~~l~ 118 (120)
T 3f6p_A 62 VEVCREVRK--KYDMPIIMLTAKDSEIDKVIGLEIGADDYVTKPFSTRELLARVKANLR 118 (120)
T ss_dssp HHHHHHHHT--TCCSCEEEEEESSCHHHHHHHHHTTCCEEEEESCCHHHHHHHHHHHHT
T ss_pred HHHHHHHHh--cCCCCEEEEECCCChHHHHHHHhCCcceeEcCCCCHHHHHHHHHHHHh
Confidence 34444443 23578876532 5566666 4666777777666654
No 195
>3fij_A LIN1909 protein; 11172J, uncharacterized protein, nysgrc, PSI-II, structural genomics, protein structure initiative; 2.30A {Listeria innocua}
Probab=38.13 E-value=19 Score=37.39 Aligned_cols=36 Identities=19% Similarity=0.153 Sum_probs=27.6
Q ss_pred ccCccEEEEEcCCc-----------------------hHHHHhhhccCCCCcEEEEeCC
Q 002281 753 HERVDFVACLGGDG-----------------------VILHASNLFRGAVPPVISFNLG 788 (943)
Q Consensus 753 ~~~~DlVIvLGGDG-----------------------TiL~Aar~~~~~~~PVLGIN~G 788 (943)
.+.+|.+|.-||-+ ..+..++.+...++|||||-+|
T Consensus 59 l~~~DGlil~GG~~v~P~~yg~~~~~~~~~~~~~rd~~~~~lir~a~~~~~PiLGIC~G 117 (254)
T 3fij_A 59 ISLVDGLLLTGGQDITPQLYLEEPSQEIGAYFPPRDSYEIALVRAALDAGKPIFAICRG 117 (254)
T ss_dssp HHTCSEEEECCCSCCCGGGGTCCCCTTCCCCCHHHHHHHHHHHHHHHHTTCCEEEETHH
T ss_pred HhhCCEEEECCCCCCChhhcCCccCcccCCcChhhhHHHHHHHHHHHHcCCCEEEECHH
Confidence 35689999999944 2566666665668999999887
No 196
>3o8o_B 6-phosphofructokinase subunit beta; transferase; HET: F6P FDP; 2.90A {Saccharomyces cerevisiae}
Probab=38.00 E-value=16 Score=44.44 Aligned_cols=43 Identities=21% Similarity=0.223 Sum_probs=31.2
Q ss_pred CccEEEEEcCCchHHHHhhh----------c------------cCCCCcEEEEeC-------C---CCcccCCCC
Q 002281 755 RVDFVACLGGDGVILHASNL----------F------------RGAVPPVISFNL-------G---SLGFLTSHP 797 (943)
Q Consensus 755 ~~DlVIvLGGDGTiL~Aar~----------~------------~~~~~PVLGIN~-------G---sLGFLt~~~ 797 (943)
++|.+|++|||||+-.|..+ + ....+||+||-- | ++||-|..+
T Consensus 98 ~Id~LvvIGGdgS~~~A~~l~~e~~~l~~eL~~~~~is~e~~~~~~~i~vVGiPkTIDNDl~gTD~TiGfdTA~~ 172 (766)
T 3o8o_B 98 GVDALIVCGGDGSLTGADLFRSEWPSLIEELLKTNRISNEQYERMKHLNICGTVGSIDNDMSTTDATIGAYSALD 172 (766)
T ss_dssp TCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHTCCCEEEEEEBCTTCCCTTCSCCBTHHHHHH
T ss_pred CCCEEEEeCCChhHHHHHHHHHhhhHHHHHHHhcccccHHHHhcCCCCcEEEEeccccCCCCCCCCCCChhHHHH
Confidence 78999999999999776532 1 124689999942 2 788877653
No 197
>3f5d_A Protein YDEA; unknow protein, PSI-II, nysgrc, structural genomics, protein structure initiative; 2.06A {Bacillus subtilis}
Probab=37.56 E-value=28 Score=35.18 Aligned_cols=95 Identities=19% Similarity=0.092 Sum_probs=53.5
Q ss_pred CCEEEEEecCChhHHHHHHHHHHHHhcCCCeEEEEcCChhhhhhcCCCCccceeeeccCccccccCccEEEEEcCCc---
Q 002281 690 PRTVLVLKKPGPALMEEAKEVASFLYHQEKMNILVEPDVHDIFARIPGFGFVQTFYLQDTSDLHERVDFVACLGGDG--- 766 (943)
Q Consensus 690 pk~VlIv~K~~~~~~~~a~~l~~~L~~~~g~~V~ve~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~DlVIvLGGDG--- 766 (943)
.++|+|+.-++-+..+.+ ..++.|.+.++++|.+-..... +....++ ........++....+|+||+.||.|
T Consensus 3 m~kV~ill~~g~~~~E~~-~~~~~l~~~~~~~v~~vs~~~~-V~~~~G~---~v~~d~~l~~~~~~~D~livpGG~~~~~ 77 (206)
T 3f5d_A 3 LKKALFLILDQYADWEGV-YLASALNQREDWSVHTVSLDPI-VSSIGGF---KTSVDYIIGLEPANFNLLVMIGGDSWSN 77 (206)
T ss_dssp CEEEEEECCSSBCTTTSH-HHHHHHHTSTTEEEEEEESSSE-EEBTTSC---EEECSEETTSSCSCCSEEEECCBSCCCC
T ss_pred ccEEEEEEcCCCcHHHHH-HHHHHHhccCCeEEEEEECCCC-EEecCCc---EEecCcChhhCCcCCCEEEEcCCCChhh
Confidence 468888877764433322 2444454434677654222111 2111121 1111111233345789999999965
Q ss_pred ---hHHHHhhhccCCCCcEEEEeCCC
Q 002281 767 ---VILHASNLFRGAVPPVISFNLGS 789 (943)
Q Consensus 767 ---TiL~Aar~~~~~~~PVLGIN~Gs 789 (943)
.++...+.+.....||.+|-.|.
T Consensus 78 ~~~~l~~~l~~~~~~gk~iaaiC~G~ 103 (206)
T 3f5d_A 78 DNKKLLHFVKTAFQKNIPIAAICGAV 103 (206)
T ss_dssp CCHHHHHHHHHHHHTTCCEEEETHHH
T ss_pred cCHHHHHHHHHHHHcCCEEEEECHHH
Confidence 57777777777788999998875
No 198
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=37.18 E-value=29 Score=36.77 Aligned_cols=58 Identities=10% Similarity=0.060 Sum_probs=43.8
Q ss_pred cccccCccEEEEEcCCchHHHHhhhccCCCCcEEEEeCC-------------CCcccCC---CCchhHHHHHHHHHcC
Q 002281 750 SDLHERVDFVACLGGDGVILHASNLFRGAVPPVISFNLG-------------SLGFLTS---HPFEDYRQDLRQVIYG 811 (943)
Q Consensus 750 ~~l~~~~DlVIvLGGDGTiL~Aar~~~~~~~PVLGIN~G-------------sLGFLt~---~~~ed~~~~L~~ll~G 811 (943)
.++...+|++|+=||=||++.|+.. ++|++.+..+ ..|++.+ .+.+++.+++++++..
T Consensus 274 ~~~l~~~d~~v~~~G~~t~~Ea~~~----G~P~v~~p~~~dq~~~a~~~~~~g~g~~~~~~~~~~~~l~~~i~~ll~~ 347 (384)
T 2p6p_A 274 DVVAPTCDLLVHHAGGVSTLTGLSA----GVPQLLIPKGSVLEAPARRVADYGAAIALLPGEDSTEAIADSCQELQAK 347 (384)
T ss_dssp HHHGGGCSEEEECSCTTHHHHHHHT----TCCEEECCCSHHHHHHHHHHHHHTSEEECCTTCCCHHHHHHHHHHHHHC
T ss_pred HHHHhhCCEEEeCCcHHHHHHHHHh----CCCEEEccCcccchHHHHHHHHCCCeEecCcCCCCHHHHHHHHHHHHcC
Confidence 3455679999999999999998764 5899988542 3566654 3577888888888764
No 199
>2eg4_A Probable thiosulfate sulfurtransferase; structural genomics, NPPSFA, national Pro protein structural and functional analyses; 1.70A {Thermus thermophilus} PDB: 2eg3_A
Probab=36.79 E-value=38 Score=34.06 Aligned_cols=71 Identities=10% Similarity=0.006 Sum_probs=0.0
Q ss_pred EEEEcCCCcccCcchhhhhHHhhhcCCcEEEEEecC--CCC-------CCCHHHHHHHHHHHhcCCCCcEEEeCccCCch
Q 002281 290 TIVDIRAERVKDNFYEAAIDDAILSGKVELIKIPVE--VRT-------APTMEQVEKFASLVSNSSKKPLYLHSKEGVWR 360 (943)
Q Consensus 290 TVIDLRse~~ee~~~~a~e~e~~e~~GI~yIhIPV~--d~~-------~Ps~E~v~aFlelL~ds~~~PVLVHC~AGKDR 360 (943)
.|||.|+.. +-..-...|- +++|+. ... .++.+.+.+++..+ .. +.+|+++|..|..|
T Consensus 8 ~iiDvR~~~---------ey~~ghIpgA--i~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~-~~~ivvyc~~g~~~ 74 (230)
T 2eg4_A 8 VLVDTRPRP---------AYEAGHLPGA--RHLDLSAPKLRLREEAELKALEGGLTELFQTL-GL-RSPVVLYDEGLTSR 74 (230)
T ss_dssp EEEECSCHH---------HHHHCBCTTC--EECCCCSCCCCCCSHHHHHHHHHHHHHHHHHT-TC-CSSEEEECSSSCHH
T ss_pred EEEECCChh---------hHhhCcCCCC--EECCccchhcccCCCCCcCCCHHHHHHHHHhc-CC-CCEEEEEcCCCCcc
Q ss_pred HHHHHHHHHHhcCCC
Q 002281 361 TYAMVSRWRQYMARC 375 (943)
Q Consensus 361 TGALvaLlr~~lGvs 375 (943)
+..++.+++ +|..
T Consensus 75 s~~a~~~L~--~G~~ 87 (230)
T 2eg4_A 75 LCRTAFFLG--LGGL 87 (230)
T ss_dssp HHHHHHHHH--HTTC
T ss_pred HHHHHHHHH--cCCc
No 200
>1hzm_A Dual specificity protein phosphatase 6; hydrolase; NMR {Homo sapiens} SCOP: c.46.1.1
Probab=36.68 E-value=26 Score=32.78 Aligned_cols=72 Identities=17% Similarity=0.147 Sum_probs=38.6
Q ss_pred CCCHhhHHHHHHcC--CcEEEEcCCCcccCcchhhhhHHhhhcCCcEEEEEecCC--------C------CCCCHHHHHH
Q 002281 274 QVTEEGLKWLMEKG--YKTIVDIRAERVKDNFYEAAIDDAILSGKVELIKIPVEV--------R------TAPTMEQVEK 337 (943)
Q Consensus 274 qpT~eDLa~Lk~lG--IKTVIDLRse~~ee~~~~a~e~e~~e~~GI~yIhIPV~d--------~------~~Ps~E~v~a 337 (943)
.++++++..+.+.+ =-.|||.|+.. + |. .-...|. +++|+.. . ..++.+....
T Consensus 17 ~is~~~l~~~l~~~~~~~~liDvR~~~-e---y~-----~gHIpgA--inip~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 85 (154)
T 1hzm_A 17 SKTVAWLNEQLELGNERLLLMDCRPQE-L---YE-----SSHIESA--INVAIPGIMLRRLQKGNLPVRALFTRGEDRDR 85 (154)
T ss_dssp BSCCCCHHHHHHHCSSSCEEECCSTTH-H---HH-----HHTSSSC--CCCCCSSHHHHTBCCSCCCTTTTSTTSHHHHH
T ss_pred ccCHHHHHHHHhCCCCCEEEEEcCCHH-H---Hh-----hccccCc--eEeCccHHHHhhhhcCcccHHHhCCCHHHHHH
Confidence 35677776665543 34799999875 1 21 1122332 3455432 0 1122233344
Q ss_pred HHHHHhcCCCCcEEEeCccCCc
Q 002281 338 FASLVSNSSKKPLYLHSKEGVW 359 (943)
Q Consensus 338 FlelL~ds~~~PVLVHC~AGKD 359 (943)
|..+ ..+.+|+++|..|..
T Consensus 86 ~~~~---~~~~~iVvyc~~g~~ 104 (154)
T 1hzm_A 86 FTRR---CGTDTVVLYDESSSD 104 (154)
T ss_dssp HHHS---TTSSCEEECCCSSSS
T ss_pred Hhcc---CCCCeEEEEeCCCCc
Confidence 4332 346799999999983
No 201
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=36.61 E-value=1.9e+02 Score=25.13 Aligned_cols=100 Identities=15% Similarity=0.180 Sum_probs=58.0
Q ss_pred CEEEEEecCChhHHHHHHHHHHHHhcCCCeEEEEcCChhhhhhcCCCCccceeeeccCccccccCccEEEEE--------
Q 002281 691 RTVLVLKKPGPALMEEAKEVASFLYHQEKMNILVEPDVHDIFARIPGFGFVQTFYLQDTSDLHERVDFVACL-------- 762 (943)
Q Consensus 691 k~VlIv~K~~~~~~~~a~~l~~~L~~~~g~~V~ve~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~DlVIvL-------- 762 (943)
.+|+||-... . ....+..+|.. .|++|..-.+..+.+..+ . ...+|+||+=
T Consensus 4 ~~ilivdd~~-~---~~~~l~~~L~~-~g~~v~~~~~~~~a~~~l--------------~--~~~~dlvi~d~~~~~~~~ 62 (140)
T 2qr3_A 4 GTIIIVDDNK-G---VLTAVQLLLKN-HFSKVITLSSPVSLSTVL--------------R--EENPEVVLLDMNFTSGIN 62 (140)
T ss_dssp CEEEEECSCH-H---HHHHHHHHHTT-TSSEEEEECCHHHHHHHH--------------H--HSCEEEEEEETTTTC---
T ss_pred ceEEEEeCCH-H---HHHHHHHHHHh-CCcEEEEeCCHHHHHHHH--------------H--cCCCCEEEEeCCcCCCCC
Confidence 5788875432 2 23345555643 477777555544332210 0 1246887763
Q ss_pred -cCCch-HHHHhhhccCCCCcEEEEe-------------CCCCcccC-CCCchhHHHHHHHHHcCC
Q 002281 763 -GGDGV-ILHASNLFRGAVPPVISFN-------------LGSLGFLT-SHPFEDYRQDLRQVIYGN 812 (943)
Q Consensus 763 -GGDGT-iL~Aar~~~~~~~PVLGIN-------------~GsLGFLt-~~~~ed~~~~L~~ll~G~ 812 (943)
+.||. +++..+.. ...+||+-+. .|-.+||. +++.+++...|.+++++.
T Consensus 63 ~~~~g~~~~~~l~~~-~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~kp~~~~~l~~~l~~~~~~~ 127 (140)
T 2qr3_A 63 NGNEGLFWLHEIKRQ-YRDLPVVLFTAYADIDLAVRGIKEGASDFVVKPWDNQKLLETLLNAASQA 127 (140)
T ss_dssp --CCHHHHHHHHHHH-CTTCCEEEEEEGGGHHHHHHHHHTTCCEEEEESCCHHHHHHHHHHHHTCC
T ss_pred CCccHHHHHHHHHhh-CcCCCEEEEECCCCHHHHHHHHHcCchheeeCCCCHHHHHHHHHHHHHhc
Confidence 44552 44444443 3467887663 36678776 578888999999988765
No 202
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=36.34 E-value=47 Score=36.16 Aligned_cols=81 Identities=10% Similarity=0.049 Sum_probs=51.0
Q ss_pred HhhHHHHHHcCCcEEEEcCCCcccCcchhhhhHHhhhcCCcEEEEEecCCCCCCCHHHHHHHHHHHhcCC--CCcEEEeC
Q 002281 277 EEGLKWLMEKGYKTIVDIRAERVKDNFYEAAIDDAILSGKVELIKIPVEVRTAPTMEQVEKFASLVSNSS--KKPLYLHS 354 (943)
Q Consensus 277 ~eDLa~Lk~lGIKTVIDLRse~~ee~~~~a~e~e~~e~~GI~yIhIPV~d~~~Ps~E~v~aFlelL~ds~--~~PVLVHC 354 (943)
.+-++..+++|++.++.+-....-.+.+.....+.+...|+..+.++=. ....+++++.++++.+.+.. +-|+-+||
T Consensus 123 ~~~i~~ak~~G~~v~~~~~~a~~~~~e~~~~ia~~~~~~Ga~~i~l~DT-~G~~~P~~v~~lv~~l~~~~~~~~pi~~H~ 201 (345)
T 1nvm_A 123 KQHIEYARNLGMDTVGFLMMSHMIPAEKLAEQGKLMESYGATCIYMADS-GGAMSMNDIRDRMRAFKAVLKPETQVGMHA 201 (345)
T ss_dssp HHHHHHHHHHTCEEEEEEESTTSSCHHHHHHHHHHHHHHTCSEEEEECT-TCCCCHHHHHHHHHHHHHHSCTTSEEEEEC
T ss_pred HHHHHHHHHCCCEEEEEEEeCCCCCHHHHHHHHHHHHHCCCCEEEECCC-cCccCHHHHHHHHHHHHHhcCCCceEEEEE
Confidence 3446777888999999983221011112223344566678888888854 23446888888777775444 67999988
Q ss_pred ccCC
Q 002281 355 KEGV 358 (943)
Q Consensus 355 ~AGK 358 (943)
+--.
T Consensus 202 Hn~~ 205 (345)
T 1nvm_A 202 HHNL 205 (345)
T ss_dssp BCTT
T ss_pred CCCc
Confidence 7544
No 203
>1o1y_A Conserved hypothetical protein TM1158; flavodoxin-like fold, structural genomics, joint center for structural genomics, JCSG; 1.70A {Thermotoga maritima} SCOP: c.23.16.1
Probab=36.34 E-value=25 Score=36.18 Aligned_cols=80 Identities=14% Similarity=0.080 Sum_probs=45.2
Q ss_pred CCEEEEEecCChhHHHHHHHHHHHHhcCCCeEEEEcCChhhhhhcCCCCccceeeeccCccccccCccEEEEEcCCch--
Q 002281 690 PRTVLVLKKPGPALMEEAKEVASFLYHQEKMNILVEPDVHDIFARIPGFGFVQTFYLQDTSDLHERVDFVACLGGDGV-- 767 (943)
Q Consensus 690 pk~VlIv~K~~~~~~~~a~~l~~~L~~~~g~~V~ve~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~DlVIvLGGDGT-- 767 (943)
.-+|+||.+....... -+.+||.. .|++|.+-+.... . ...+....+|.||.-||-++
T Consensus 12 ~~~~~~i~~~~~~~~~---~i~~~l~~-~G~~v~v~~~~~~-----~-----------~~~~~l~~~Dglil~GG~~~~~ 71 (239)
T 1o1y_A 12 HVRVLAIRHVEIEDLG---MMEDIFRE-KNWSFDYLDTPKG-----E-----------KLERPLEEYSLVVLLGGYMGAY 71 (239)
T ss_dssp CCEEEEECSSTTSSCT---HHHHHHHH-TTCEEEEECGGGT-----C-----------CCSSCGGGCSEEEECCCSCCTT
T ss_pred eeEEEEEECCCCCCch---HHHHHHHh-CCCcEEEeCCcCc-----c-----------ccccchhcCCEEEECCCCcccc
Confidence 4578888886644332 24455543 4777764221100 0 01112346899999998643
Q ss_pred ----------HHHHhhhccCCCCcEEEEeCCC
Q 002281 768 ----------ILHASNLFRGAVPPVISFNLGS 789 (943)
Q Consensus 768 ----------iL~Aar~~~~~~~PVLGIN~Gs 789 (943)
++...+.+....+|||||-+|.
T Consensus 72 ~~~~~~~l~~~~~~i~~~~~~~~PiLGIC~G~ 103 (239)
T 1o1y_A 72 EEEKYPFLKYEFQLIEEILKKEIPFLGICLGS 103 (239)
T ss_dssp CTTTCTHHHHHHHHHHHHHHHTCCEEEETHHH
T ss_pred CCccChhHHHHHHHHHHHHHCCCCEEEEchhH
Confidence 2334444434568999998873
No 204
>3noq_A THIJ/PFPI family protein; DJ-1 superfamily, isocyanide hydratase, isonitrIle hydratase; HET: NHE; 1.00A {Pseudomonas fluorescens} PDB: 3noo_A 3non_A 3nor_A* 3nov_A
Probab=36.17 E-value=80 Score=32.29 Aligned_cols=96 Identities=16% Similarity=0.084 Sum_probs=52.3
Q ss_pred CCCEEEEEecCChhHHHHHHHHHHHHhcCCCeEEEEcCChhhhhhcCCCCccceeeeccCccccccCccEEEEEcCCch-
Q 002281 689 TPRTVLVLKKPGPALMEEAKEVASFLYHQEKMNILVEPDVHDIFARIPGFGFVQTFYLQDTSDLHERVDFVACLGGDGV- 767 (943)
Q Consensus 689 ~pk~VlIv~K~~~~~~~~a~~l~~~L~~~~g~~V~ve~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~DlVIvLGGDGT- 767 (943)
.+++|+|+.-++-+..+.+. .++.|....+++|.+-......+....+. ........++. ..+|+||+-||.|+
T Consensus 4 m~~~V~ill~~gf~~~e~~~-p~evl~~~~~~~v~~vs~~~~~V~~~~G~---~v~~d~~l~~~-~~~D~livpGG~g~~ 78 (231)
T 3noq_A 4 MAVQIGFLLFPEVQQLDLTG-PHDVLASLPDVQVHLIWKEPGPVVASSGL---VLQATTSFADC-PPLDVICIPGGTGVG 78 (231)
T ss_dssp CCEEEEEECCTTCCHHHHHH-HHHHHTTSTTEEEEEEESSSEEEECTTSC---EEEECEETTTC-CCCSEEEECCSTTHH
T ss_pred CcEEEEEEEeCCCcHHHHHH-HHHHHHcCCCCEEEEEECCCCcEEcCCCC---EEecccChhHC-CcCCEEEECCCCChh
Confidence 45789999877755544432 33444332567665432211111111111 11111112232 46899999999886
Q ss_pred -------HHHHhhhccCCCCcEEEEeCCC
Q 002281 768 -------ILHASNLFRGAVPPVISFNLGS 789 (943)
Q Consensus 768 -------iL~Aar~~~~~~~PVLGIN~Gs 789 (943)
++...+.+.....+|.+|-.|.
T Consensus 79 ~~~~~~~l~~~lr~~~~~g~~v~aiC~G~ 107 (231)
T 3noq_A 79 ALMEDPQALAFIRQQAARARYVTSVSTGS 107 (231)
T ss_dssp HHTTCHHHHHHHHHHHTTCSEEEEETTHH
T ss_pred hhccCHHHHHHHHHHHhcCCEEEEECHHH
Confidence 3444555666788999998875
No 205
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=35.84 E-value=1.7e+02 Score=25.37 Aligned_cols=103 Identities=11% Similarity=0.170 Sum_probs=53.8
Q ss_pred CCCEEEEEecCChhHHHHHHHHHHHHhcCCCeEEEEcCChhhhhhcCCCCccceeeeccCccccccCccEEEEE----cC
Q 002281 689 TPRTVLVLKKPGPALMEEAKEVASFLYHQEKMNILVEPDVHDIFARIPGFGFVQTFYLQDTSDLHERVDFVACL----GG 764 (943)
Q Consensus 689 ~pk~VlIv~K~~~~~~~~a~~l~~~L~~~~g~~V~ve~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~DlVIvL----GG 764 (943)
...+|+||-... .. ...+..+|.+ .|+.|..-.+..+.+..+ ....+|+||+= |+
T Consensus 5 ~~~~ilivdd~~-~~---~~~l~~~L~~-~g~~v~~~~~~~~a~~~l----------------~~~~~dlii~d~~l~~~ 63 (132)
T 3lte_A 5 QSKRILVVDDDQ-AM---AAAIERVLKR-DHWQVEIAHNGFDAGIKL----------------STFEPAIMTLDLSMPKL 63 (132)
T ss_dssp --CEEEEECSCH-HH---HHHHHHHHHH-TTCEEEEESSHHHHHHHH----------------HHTCCSEEEEESCBTTB
T ss_pred CCccEEEEECCH-HH---HHHHHHHHHH-CCcEEEEeCCHHHHHHHH----------------HhcCCCEEEEecCCCCC
Confidence 356888885432 22 2234444543 577777655544432211 01246777652 44
Q ss_pred Cc-hHHHHhhhccC-CCCcEEEEeC------------CCCcccC-CCCchhHHHHHHHHHcCC
Q 002281 765 DG-VILHASNLFRG-AVPPVISFNL------------GSLGFLT-SHPFEDYRQDLRQVIYGN 812 (943)
Q Consensus 765 DG-TiL~Aar~~~~-~~~PVLGIN~------------GsLGFLt-~~~~ed~~~~L~~ll~G~ 812 (943)
|| .+++..+.... ..+||+-+.. |-.+||. +++.+++...|++...+.
T Consensus 64 ~g~~~~~~l~~~~~~~~~~ii~~~~~~~~~~~~~~~~g~~~~l~kP~~~~~l~~~i~~~~~~~ 126 (132)
T 3lte_A 64 DGLDVIRSLRQNKVANQPKILVVSGLDKAKLQQAVTEGADDYLEKPFDNDALLDRIHDLVNEG 126 (132)
T ss_dssp CHHHHHHHHHTTTCSSCCEEEEECCSCSHHHHHHHHHTCCEEECSSCCHHHHHHHHHHHHC--
T ss_pred CHHHHHHHHHhcCccCCCeEEEEeCCChHHHHHHHHhChHHHhhCCCCHHHHHHHHHHHcCCC
Confidence 55 34444444322 3456654432 5666776 477888888888887765
No 206
>3n53_A Response regulator receiver modulated diguanylate; diguanylate cyclase, protein structure I II(PSI II), NYSGXRC, structural genomics; 2.20A {Pelobacter carbinolicus} SCOP: c.23.1.0
Probab=33.64 E-value=1.4e+02 Score=26.30 Aligned_cols=58 Identities=17% Similarity=0.209 Sum_probs=34.2
Q ss_pred CccEEEE----EcCCc-hHHHHhhhccC-CCCcEEEEeC-------------CCCcccC-CCCchhHHHHHHHHHcCC
Q 002281 755 RVDFVAC----LGGDG-VILHASNLFRG-AVPPVISFNL-------------GSLGFLT-SHPFEDYRQDLRQVIYGN 812 (943)
Q Consensus 755 ~~DlVIv----LGGDG-TiL~Aar~~~~-~~~PVLGIN~-------------GsLGFLt-~~~~ed~~~~L~~ll~G~ 812 (943)
.+|+||+ -|+|| .+++..+.... ..+||+-+.. |-.+||. +++.+++...+++++.+.
T Consensus 46 ~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~i~~~~~~~ 123 (140)
T 3n53_A 46 HPDLVILDMDIIGENSPNLCLKLKRSKGLKNVPLILLFSSEHKEAIVNGLHSGADDYLTKPFNRNDLLSRIEIHLRTQ 123 (140)
T ss_dssp CCSEEEEETTC------CHHHHHHTSTTCTTCCEEEEECC----CTTTTTTCCCSEEEESSCCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHcCcccCCCCEEEEecCCCHHHHHHHHhcCCCeeeeCCCCHHHHHHHHHHHHhhH
Confidence 4677775 25566 34555554321 4678875532 5556665 578889999999888764
No 207
>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp}
Probab=33.27 E-value=12 Score=41.95 Aligned_cols=28 Identities=14% Similarity=0.127 Sum_probs=19.9
Q ss_pred CCCCcEEEeCccCCchHHHHHHHHHHhcCC
Q 002281 345 SSKKPLYLHSKEGVWRTYAMVSRWRQYMAR 374 (943)
Q Consensus 345 s~~~PVLVHC~AGKDRTGALvaLlr~~lGv 374 (943)
..++||++||..|. |+..++..++. +|.
T Consensus 425 ~~~~~vvv~C~~G~-ra~~a~~~L~~-~G~ 452 (474)
T 3tp9_A 425 PRDGSVCVYCRTGG-RSAIAASLLRA-HGV 452 (474)
T ss_dssp CSSSCEEEECSSSH-HHHHHHHHHHH-HTC
T ss_pred CCCCEEEEECCCCH-HHHHHHHHHHH-cCC
Confidence 35679999999998 87765555543 454
No 208
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=33.12 E-value=1.3e+02 Score=26.49 Aligned_cols=102 Identities=12% Similarity=0.101 Sum_probs=56.7
Q ss_pred CCEEEEEecCChhHHHHHHHHHHHHhcCCCeEEEEcCChhhhhhcCCCCccceeeeccCccccccCccEEEE----EcCC
Q 002281 690 PRTVLVLKKPGPALMEEAKEVASFLYHQEKMNILVEPDVHDIFARIPGFGFVQTFYLQDTSDLHERVDFVAC----LGGD 765 (943)
Q Consensus 690 pk~VlIv~K~~~~~~~~a~~l~~~L~~~~g~~V~ve~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~DlVIv----LGGD 765 (943)
..+|+||-... .. ...+..+|.+ .|++|..-.+..+.+..+. ...+|+||+ -|.|
T Consensus 6 ~~~iLivdd~~-~~---~~~l~~~l~~-~g~~v~~~~~~~~a~~~l~----------------~~~~dlvi~d~~l~~~~ 64 (140)
T 3grc_A 6 RPRILICEDDP-DI---ARLLNLMLEK-GGFDSDMVHSAAQALEQVA----------------RRPYAAMTVDLNLPDQD 64 (140)
T ss_dssp CSEEEEECSCH-HH---HHHHHHHHHH-TTCEEEEECSHHHHHHHHH----------------HSCCSEEEECSCCSSSC
T ss_pred CCCEEEEcCCH-HH---HHHHHHHHHH-CCCeEEEECCHHHHHHHHH----------------hCCCCEEEEeCCCCCCC
Confidence 46788885433 22 2334444543 4677765555443332110 124677776 2556
Q ss_pred ch-HHHHhhhc-cCCCCcEEEEe--------------CCCCcccC-CCCchhHHHHHHHHHcCC
Q 002281 766 GV-ILHASNLF-RGAVPPVISFN--------------LGSLGFLT-SHPFEDYRQDLRQVIYGN 812 (943)
Q Consensus 766 GT-iL~Aar~~-~~~~~PVLGIN--------------~GsLGFLt-~~~~ed~~~~L~~ll~G~ 812 (943)
|. +++..+.. ....+||+-+. .|-.+||. +++.+++...|++++++.
T Consensus 65 g~~~~~~l~~~~~~~~~~ii~~s~~~~~~~~~~~~~~~g~~~~l~kP~~~~~l~~~i~~~l~~~ 128 (140)
T 3grc_A 65 GVSLIRALRRDSRTRDLAIVVVSANAREGELEFNSQPLAVSTWLEKPIDENLLILSLHRAIDNM 128 (140)
T ss_dssp HHHHHHHHHTSGGGTTCEEEEECTTHHHHHHHHCCTTTCCCEEECSSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCcccCCCCEEEEecCCChHHHHHHhhhcCCCEEEeCCCCHHHHHHHHHHHHHhc
Confidence 62 34444431 12467887653 25566666 578889999999988765
No 209
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=32.91 E-value=1.8e+02 Score=25.14 Aligned_cols=101 Identities=14% Similarity=0.068 Sum_probs=56.4
Q ss_pred CCEEEEEecCChhHHHHHHHHHHHHhcCCCeEEEEcCChhhhhhcCCCCccceeeeccCccccccCccEEEE----EcCC
Q 002281 690 PRTVLVLKKPGPALMEEAKEVASFLYHQEKMNILVEPDVHDIFARIPGFGFVQTFYLQDTSDLHERVDFVAC----LGGD 765 (943)
Q Consensus 690 pk~VlIv~K~~~~~~~~a~~l~~~L~~~~g~~V~ve~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~DlVIv----LGGD 765 (943)
..+|+||-... ... ..+..+|. .+.+|..-.+..+.+..+ ....+|+||+ -|.|
T Consensus 4 ~~~ilivdd~~-~~~---~~l~~~l~--~~~~v~~~~~~~~a~~~l----------------~~~~~dlvi~d~~l~~~~ 61 (133)
T 3nhm_A 4 KPKVLIVENSW-TMR---ETLRLLLS--GEFDCTTAADGASGLQQA----------------LAHPPDVLISDVNMDGMD 61 (133)
T ss_dssp -CEEEEECSCH-HHH---HHHHHHHT--TTSEEEEESSHHHHHHHH----------------HHSCCSEEEECSSCSSSC
T ss_pred CCEEEEEcCCH-HHH---HHHHHHHh--CCcEEEEECCHHHHHHHH----------------hcCCCCEEEEeCCCCCCC
Confidence 35788885432 222 22344443 467777655544433211 0124677776 2556
Q ss_pred c-hHHHHhhhcc-CCCCcEEEEeC------------CCCcccC-CCCchhHHHHHHHHHcCC
Q 002281 766 G-VILHASNLFR-GAVPPVISFNL------------GSLGFLT-SHPFEDYRQDLRQVIYGN 812 (943)
Q Consensus 766 G-TiL~Aar~~~-~~~~PVLGIN~------------GsLGFLt-~~~~ed~~~~L~~ll~G~ 812 (943)
| .+++..+... ...+||+-+.. |--+||. +++++++...+++++++.
T Consensus 62 g~~~~~~l~~~~~~~~~pii~~s~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~i~~~l~~~ 123 (133)
T 3nhm_A 62 GYALCGHFRSEPTLKHIPVIFVSGYAPRTEGPADQPVPDAYLVKPVKPPVLIAQLHALLARA 123 (133)
T ss_dssp HHHHHHHHHHSTTTTTCCEEEEESCCC-----TTSCCCSEEEESSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCccCCCCEEEEeCCCcHhHHHHhhcCCceEEeccCCHHHHHHHHHHHHhhh
Confidence 6 2444444432 23678876542 4455665 578899999999998765
No 210
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=32.69 E-value=2.4e+02 Score=24.29 Aligned_cols=102 Identities=15% Similarity=0.229 Sum_probs=51.8
Q ss_pred CCCEEEEEecCChhHHHHHHHHHHHHhcCCCeEEEEcCChhhhhhcCCCCccceeeeccCccccccCccEEEE----EcC
Q 002281 689 TPRTVLVLKKPGPALMEEAKEVASFLYHQEKMNILVEPDVHDIFARIPGFGFVQTFYLQDTSDLHERVDFVAC----LGG 764 (943)
Q Consensus 689 ~pk~VlIv~K~~~~~~~~a~~l~~~L~~~~g~~V~ve~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~DlVIv----LGG 764 (943)
+.++|+||-... .. ...+.++|.+ .|..|..-.+..+.+..+. ...+|+||+ -|+
T Consensus 6 ~~~~ilivdd~~-~~---~~~l~~~L~~-~g~~v~~~~~~~~a~~~l~----------------~~~~dlvi~d~~l~~~ 64 (130)
T 3eod_A 6 VGKQILIVEDEQ-VF---RSLLDSWFSS-LGATTVLAADGVDALELLG----------------GFTPDLMICDIAMPRM 64 (130)
T ss_dssp TTCEEEEECSCH-HH---HHHHHHHHHH-TTCEEEEESCHHHHHHHHT----------------TCCCSEEEECCC----
T ss_pred CCCeEEEEeCCH-HH---HHHHHHHHHh-CCceEEEeCCHHHHHHHHh----------------cCCCCEEEEecCCCCC
Confidence 356888886432 22 2334444543 4677766554443332111 124677775 355
Q ss_pred Cc-hHHHHhhhccCCCCcEEEEeC-------------CCCcccC-CC-CchhHHHHHHHHHcCC
Q 002281 765 DG-VILHASNLFRGAVPPVISFNL-------------GSLGFLT-SH-PFEDYRQDLRQVIYGN 812 (943)
Q Consensus 765 DG-TiL~Aar~~~~~~~PVLGIN~-------------GsLGFLt-~~-~~ed~~~~L~~ll~G~ 812 (943)
|| .+++..+.. ...+||+-+.. |-.+||. ++ +.+++...+++++.+.
T Consensus 65 ~g~~~~~~l~~~-~~~~~ii~~t~~~~~~~~~~~~~~g~~~~l~KP~~~~~~l~~~i~~~l~~~ 127 (130)
T 3eod_A 65 NGLKLLEHIRNR-GDQTPVLVISATENMADIAKALRLGVEDVLLKPVKDLNRLREMVFACLYPS 127 (130)
T ss_dssp -CHHHHHHHHHT-TCCCCEEEEECCCCHHHHHHHHHHCCSEEEESCC---CHHHHHHHHHHC--
T ss_pred CHHHHHHHHHhc-CCCCCEEEEEcCCCHHHHHHHHHcCCCEEEeCCCCcHHHHHHHHHHHhchh
Confidence 66 345555543 34678876542 5666666 35 6677888888777654
No 211
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=32.58 E-value=1.5e+02 Score=26.68 Aligned_cols=57 Identities=19% Similarity=0.238 Sum_probs=37.9
Q ss_pred CccEEEE----EcCCc-hHHHHhhhccCCCCcEEEEeC-------------CCCcccC-CCCchhHHHHHHHHHcCC
Q 002281 755 RVDFVAC----LGGDG-VILHASNLFRGAVPPVISFNL-------------GSLGFLT-SHPFEDYRQDLRQVIYGN 812 (943)
Q Consensus 755 ~~DlVIv----LGGDG-TiL~Aar~~~~~~~PVLGIN~-------------GsLGFLt-~~~~ed~~~~L~~ll~G~ 812 (943)
.+|+||+ -|+|| .+++..+.. ...+||+-+.. |-.|||. +++.+++..++.+++.+.
T Consensus 61 ~~dlii~d~~l~~~~g~~~~~~l~~~-~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~Kp~~~~~l~~~i~~~~~~~ 136 (152)
T 3eul_A 61 LPDVALLDYRMPGMDGAQVAAAVRSY-ELPTRVLLISAHDEPAIVYQALQQGAAGFLLKDSTRTEIVKAVLDCAKGR 136 (152)
T ss_dssp CCSEEEEETTCSSSCHHHHHHHHHHT-TCSCEEEEEESCCCHHHHHHHHHTTCSEEEETTCCHHHHHHHHHHHHHCC
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHhc-CCCCeEEEEEccCCHHHHHHHHHcCCCEEEecCCCHHHHHHHHHHHHcCC
Confidence 4687776 24455 344444443 34567876543 6677776 467889999999999876
No 212
>1yt8_A Thiosulfate sulfurtransferase; rhodanase domains, cyanide detoxification, structural genomics, PSI, protein structure initiative; 1.90A {Pseudomonas aeruginosa} SCOP: c.46.1.2 c.46.1.2 c.46.1.2 c.46.1.2
Probab=32.43 E-value=53 Score=37.73 Aligned_cols=80 Identities=21% Similarity=0.206 Sum_probs=45.3
Q ss_pred CCCHhhHHHHHHcC--CcEEEEcCCCcccCcchhhhhHHhhhcCCcEEEEEecCCCCCCCHHHHHHHHHHHhcCCCCcEE
Q 002281 274 QVTEEGLKWLMEKG--YKTIVDIRAERVKDNFYEAAIDDAILSGKVELIKIPVEVRTAPTMEQVEKFASLVSNSSKKPLY 351 (943)
Q Consensus 274 qpT~eDLa~Lk~lG--IKTVIDLRse~~ee~~~~a~e~e~~e~~GI~yIhIPV~d~~~Ps~E~v~aFlelL~ds~~~PVL 351 (943)
.++++++..+.+.+ =-.|||.|+.. + |. .-...|. +++|+. ++......+....+.||+
T Consensus 266 ~is~~~l~~~~~~~~~~~~liDvR~~~-e---y~-----~ghIpgA--inip~~--------~l~~~~~~~~~~~~~~iv 326 (539)
T 1yt8_A 266 RLDLAGLAQWQDEHDRTTYLLDVRTPE-E---YE-----AGHLPGS--RSTPGG--------QLVQETDHVASVRGARLV 326 (539)
T ss_dssp EECHHHHHHHHHCTTSCEEEEECSCHH-H---HH-----HCBCTTC--EECCHH--------HHHHSHHHHCCSBTCEEE
T ss_pred eECHHHHHHHHhCCCCCeEEEECCCHH-H---Hh-----cCCCCCC--EeCCHH--------HHHHHHHhhcCCCCCeEE
Confidence 35778887776553 24799999864 1 11 1122332 455552 333333333222468999
Q ss_pred EeCccCCchHHHHHHHHHHhcCC
Q 002281 352 LHSKEGVWRTYAMVSRWRQYMAR 374 (943)
Q Consensus 352 VHC~AGKDRTGALvaLlr~~lGv 374 (943)
++|..|. |+...+..+ ..+|.
T Consensus 327 v~c~~g~-rs~~aa~~L-~~~G~ 347 (539)
T 1yt8_A 327 LVDDDGV-RANMSASWL-AQMGW 347 (539)
T ss_dssp EECSSSS-HHHHHHHHH-HHTTC
T ss_pred EEeCCCC-cHHHHHHHH-HHcCC
Confidence 9999997 877555444 33454
No 213
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=32.11 E-value=30 Score=36.91 Aligned_cols=58 Identities=19% Similarity=0.168 Sum_probs=41.1
Q ss_pred cccccCccEEEEEcCCchHHHHhhhccCCCCcEEEEeCC-------------CCcccCCC---CchhHHHHHHHHHcC
Q 002281 750 SDLHERVDFVACLGGDGVILHASNLFRGAVPPVISFNLG-------------SLGFLTSH---PFEDYRQDLRQVIYG 811 (943)
Q Consensus 750 ~~l~~~~DlVIvLGGDGTiL~Aar~~~~~~~PVLGIN~G-------------sLGFLt~~---~~ed~~~~L~~ll~G 811 (943)
.++...+|++|+=||=||++.|... ++|++.+..+ ..|++.+. +.+++.+++.++++.
T Consensus 295 ~~ll~~ad~~v~~gG~~t~~Ea~~~----G~P~v~~p~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~ai~~ll~~ 368 (398)
T 4fzr_A 295 SAIMPACDVVVHHGGHGTTLTCLSE----GVPQVSVPVIAEVWDSARLLHAAGAGVEVPWEQAGVESVLAACARIRDD 368 (398)
T ss_dssp HHHGGGCSEEEECCCHHHHHHHHHT----TCCEEECCCSGGGHHHHHHHHHTTSEEECC-------CHHHHHHHHHHC
T ss_pred HHHHhhCCEEEecCCHHHHHHHHHh----CCCEEecCCchhHHHHHHHHHHcCCEEecCcccCCHHHHHHHHHHHHhC
Confidence 4556679999999999999988764 5799986542 46776543 567788888888764
No 214
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=31.95 E-value=56 Score=34.78 Aligned_cols=34 Identities=9% Similarity=0.040 Sum_probs=26.3
Q ss_pred CccccccCccEEEEEcCCchHHHHhhhccCCCCcEEEEe
Q 002281 748 DTSDLHERVDFVACLGGDGVILHASNLFRGAVPPVISFN 786 (943)
Q Consensus 748 ~~~~l~~~~DlVIvLGGDGTiL~Aar~~~~~~~PVLGIN 786 (943)
+..++...+|++|+-|| +|+..++.. .+|.+-|-
T Consensus 218 ~m~~~m~~aDlvI~~gG-~T~~E~~~~----g~P~i~ip 251 (282)
T 3hbm_A 218 NIAKLMNESNKLIISAS-SLVNEALLL----KANFKAIC 251 (282)
T ss_dssp CHHHHHHTEEEEEEESS-HHHHHHHHT----TCCEEEEC
T ss_pred HHHHHHHHCCEEEECCc-HHHHHHHHc----CCCEEEEe
Confidence 34456678999999999 899877654 57888875
No 215
>1okg_A Possible 3-mercaptopyruvate sulfurtransferase; rhodanese, prolyl isomerase, catalytic triad, serine protease, leishmania pyruvate; HET: CSR; 2.10A {Leishmania major} SCOP: c.46.1.2 c.46.1.2 d.26.1.3
Probab=31.29 E-value=28 Score=38.45 Aligned_cols=26 Identities=8% Similarity=0.124 Sum_probs=19.9
Q ss_pred CCcEEEeCccCCchHHHHHHHHHHhcCC
Q 002281 347 KKPLYLHSKEGVWRTYAMVSRWRQYMAR 374 (943)
Q Consensus 347 ~~PVLVHC~AGKDRTGALvaLlr~~lGv 374 (943)
++||++||.+|. |+..++..+.. +|.
T Consensus 246 d~~ivvyC~sG~-rs~~a~~~L~~-~G~ 271 (373)
T 1okg_A 246 LSSFVFSCGSGV-TACINIALVHH-LGL 271 (373)
T ss_dssp CTTSEEECSSSS-THHHHHHHHHH-TTS
T ss_pred CCCEEEECCchH-HHHHHHHHHHH-cCC
Confidence 679999999999 88866655543 564
No 216
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=30.89 E-value=1.7e+02 Score=30.71 Aligned_cols=57 Identities=14% Similarity=0.134 Sum_probs=42.0
Q ss_pred ccccCccEEEEEcCCchHHHHhhhccCCCCcEEEEeC--------------CCCcccCCC---CchhHHHHHHHHHcC
Q 002281 751 DLHERVDFVACLGGDGVILHASNLFRGAVPPVISFNL--------------GSLGFLTSH---PFEDYRQDLRQVIYG 811 (943)
Q Consensus 751 ~l~~~~DlVIvLGGDGTiL~Aar~~~~~~~PVLGIN~--------------GsLGFLt~~---~~ed~~~~L~~ll~G 811 (943)
++...+|++|+-||-||++.++.. ++|++.+-. +..|.+... +.+++.+++.++++.
T Consensus 293 ~ll~~ad~~v~~~G~~t~~Ea~~~----G~P~v~~p~~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~~~~ll~~ 366 (402)
T 3ia7_A 293 SVLAHARACLTHGTTGAVLEAFAA----GVPLVLVPHFATEAAPSAERVIELGLGSVLRPDQLEPASIREAVERLAAD 366 (402)
T ss_dssp HHHTTEEEEEECCCHHHHHHHHHT----TCCEEECGGGCGGGHHHHHHHHHTTSEEECCGGGCSHHHHHHHHHHHHHC
T ss_pred HHHhhCCEEEECCCHHHHHHHHHh----CCCEEEeCCCcccHHHHHHHHHHcCCEEEccCCCCCHHHHHHHHHHHHcC
Confidence 667789999999999999988754 578886543 235555543 567788888888754
No 217
>3c97_A Signal transduction histidine kinase; structural genomics, signaling, PSI-2, protein structure initiative; 1.70A {Aspergillus oryzae RIB40}
Probab=30.50 E-value=1.7e+02 Score=25.79 Aligned_cols=58 Identities=9% Similarity=0.079 Sum_probs=36.6
Q ss_pred CccEEEE----EcCCch-HHHHhhhcc----CCCCcEEEEe----------CCCCcccC-CCCchhHHHHHHHHHcCC
Q 002281 755 RVDFVAC----LGGDGV-ILHASNLFR----GAVPPVISFN----------LGSLGFLT-SHPFEDYRQDLRQVIYGN 812 (943)
Q Consensus 755 ~~DlVIv----LGGDGT-iL~Aar~~~----~~~~PVLGIN----------~GsLGFLt-~~~~ed~~~~L~~ll~G~ 812 (943)
.+|+||+ -|.||. +++..+... ...+||+.+. .|-.|||. +++.+++...+++++.|.
T Consensus 54 ~~dlvllD~~lp~~~g~~~~~~l~~~~~~~~~~~~~ii~~s~~~~~~~~~~~g~~~~l~KP~~~~~L~~~i~~~~~~~ 131 (140)
T 3c97_A 54 QFDVIIMDIQMPVMDGLEAVSEIRNYERTHNTKRASIIAITADTIDDDRPGAELDEYVSKPLNPNQLRDVVLTCHSEG 131 (140)
T ss_dssp CCSEEEECTTCCSSCHHHHHHHHHHHHHHHTCCCCCCEEEESSCCSCCCCCSSCSEEEESSCCHHHHHHHHHHHHC--
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHhhhhhcCCCceEEEEEeCccchhHHHhCChhheEeCCCCHHHHHHHHHHHhCCC
Confidence 4688776 255773 445444321 2456787764 24456776 578899999999998876
No 218
>2vsw_A Dual specificity protein phosphatase 16; hydrolase, dual specificity phosphatase, nucleus, cytoplasm, rhodanese domain, CAsp8; 2.20A {Homo sapiens} PDB: 3tg3_A
Probab=30.41 E-value=43 Score=31.41 Aligned_cols=27 Identities=30% Similarity=0.310 Sum_probs=18.5
Q ss_pred cCCCCHhhHHHHHHc--CCcEEEEcCCCc
Q 002281 272 GGQVTEEGLKWLMEK--GYKTIVDIRAER 298 (943)
Q Consensus 272 SGqpT~eDLa~Lk~l--GIKTVIDLRse~ 298 (943)
|.+++++++..+.+. +=-.|||.|+..
T Consensus 3 ~~~Is~~~l~~~l~~~~~~~~iiDvR~~~ 31 (153)
T 2vsw_A 3 GTQIVTERLVALLESGTEKVLLIDSRPFV 31 (153)
T ss_dssp CEEECHHHHHHHHTSTTCCEEEEECSCHH
T ss_pred CccccHHHHHHHHhcCCCCEEEEECCCHH
Confidence 446788888776652 224799999864
No 219
>1sg6_A Pentafunctional AROM polypeptide; shikimate pathway, aromatic amino acid biosynthesis, DHQS, O form J, domain movement, cyclase, lyase; HET: NAD; 1.70A {Emericella nidulans} SCOP: e.22.1.1 PDB: 1nr5_A* 1nrx_A* 1nua_A 1nva_A* 1nvb_A* 1nvd_A* 1nve_A* 1nvf_A* 1dqs_A*
Probab=30.36 E-value=32 Score=38.12 Aligned_cols=31 Identities=23% Similarity=0.214 Sum_probs=25.6
Q ss_pred ccEEEEEcCCchHHHHhhhcc---CCCCcEEEEeC
Q 002281 756 VDFVACLGGDGVILHASNLFR---GAVPPVISFNL 787 (943)
Q Consensus 756 ~DlVIvLGGDGTiL~Aar~~~---~~~~PVLGIN~ 787 (943)
.|+||.||| |.++-++.... ...+|++-|-+
T Consensus 106 ~d~iIalGG-Gsv~D~ak~~Aa~~~rgip~i~IPT 139 (393)
T 1sg6_A 106 DTVVIALGG-GVIGDLTGFVASTYMRGVRYVQVPT 139 (393)
T ss_dssp TCEEEEEES-HHHHHHHHHHHHHGGGCCEEEEEEC
T ss_pred CCEEEEECC-cHHHHHHHHHHHHhcCCCCEEEECC
Confidence 499999999 99999988754 35788888876
No 220
>1dz3_A Stage 0 sporulation protein A; response regulator, domain swapping; 1.65A {Bacillus stearothermophilus} SCOP: c.23.1.1 PDB: 1qmp_A*
Probab=30.35 E-value=2.3e+02 Score=24.50 Aligned_cols=58 Identities=26% Similarity=0.285 Sum_probs=36.5
Q ss_pred CccEEEEE----cCCch-HHHHhhhccCCCCcEEEEe-------------CCCCcccC-CCCchhHHHHHHHHHcCC
Q 002281 755 RVDFVACL----GGDGV-ILHASNLFRGAVPPVISFN-------------LGSLGFLT-SHPFEDYRQDLRQVIYGN 812 (943)
Q Consensus 755 ~~DlVIvL----GGDGT-iL~Aar~~~~~~~PVLGIN-------------~GsLGFLt-~~~~ed~~~~L~~ll~G~ 812 (943)
.+|+||+= |.||. +++..+......+||+-+. .|-.|||. +++++++...+++++...
T Consensus 48 ~~dlvllD~~l~~~~g~~~~~~l~~~~~~~~~ii~ls~~~~~~~~~~~~~~ga~~~l~KP~~~~~l~~~i~~~~~~~ 124 (130)
T 1dz3_A 48 RPDILLLDIIMPHLDGLAVLERIRAGFEHQPNVIMLTAFGQEDVTKKAVELGASYFILKPFDMENLAHHIRQVYGKT 124 (130)
T ss_dssp CCSEEEEESCCSSSCHHHHHHHHHHHCSSCCEEEEEEETTCHHHHHHHHHTTCEEEEECSSCCTTHHHHHHHHHHCC
T ss_pred CCCEEEEecCCCCCCHHHHHHHHHhcCCCCCcEEEEecCCCHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHHHhcCC
Confidence 46777752 55773 4555554223456776542 36677776 578889999998887653
No 221
>4e08_A DJ-1 beta; flavodoxin-like fold, stress response, motor protein; 2.00A {Drosophila melanogaster}
Probab=30.05 E-value=1.3e+02 Score=29.35 Aligned_cols=95 Identities=16% Similarity=0.151 Sum_probs=49.0
Q ss_pred CCEEEEEecCChhHHHHHHHHHHHHhcCCCeEEEEc-CChhhhhhcCCCCccceeeeccCcccc-ccCccEEEEEcCC-c
Q 002281 690 PRTVLVLKKPGPALMEEAKEVASFLYHQEKMNILVE-PDVHDIFARIPGFGFVQTFYLQDTSDL-HERVDFVACLGGD-G 766 (943)
Q Consensus 690 pk~VlIv~K~~~~~~~~a~~l~~~L~~~~g~~V~ve-~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~DlVIvLGGD-G 766 (943)
.|+|+|+.-++-+..+.+ ..++.|.+ .|++|.+- ++-...+....+. ........++. ...+|+||+.||. |
T Consensus 5 ~kkv~ill~~g~~~~e~~-~~~~~l~~-ag~~v~~~s~~~~~~v~~~~g~---~i~~d~~l~~~~~~~~D~livpGG~~~ 79 (190)
T 4e08_A 5 SKSALVILAPGAEEMEFI-IAADVLRR-AGIKVTVAGLNGGEAVKCSRDV---QILPDTSLAQVASDKFDVVVLPGGLGG 79 (190)
T ss_dssp CCEEEEEECTTCCHHHHH-HHHHHHHH-TTCEEEEEESSSSSCEECTTSC---EEECSEETGGGTTCCCSEEEECCCHHH
T ss_pred CcEEEEEECCCchHHHHH-HHHHHHHH-CCCEEEEEECCCCcceecCCCc---EEECCCCHHHCCcccCCEEEECCCChH
Confidence 478988877665544443 23344433 35655442 2110111111111 11001112232 2468999999995 3
Q ss_pred h--------HHHHhhhccCCCCcEEEEeCCC
Q 002281 767 V--------ILHASNLFRGAVPPVISFNLGS 789 (943)
Q Consensus 767 T--------iL~Aar~~~~~~~PVLGIN~Gs 789 (943)
. ++...+.+.....||.+|-.|.
T Consensus 80 ~~~~~~~~~~~~~l~~~~~~~k~i~aiC~G~ 110 (190)
T 4e08_A 80 SNAMGESSLVGDLLRSQESGGGLIAAICAAP 110 (190)
T ss_dssp HHHHHHCHHHHHHHHHHHHTTCEEEEETTTH
T ss_pred HHHhhhCHHHHHHHHHHHHCCCEEEEECHHH
Confidence 2 3444555556788999998886
No 222
>3rhg_A Putative phophotriesterase; hydrolase, amidohydrolase, zinc binding site, enzyme functio initiative, EFI; HET: SO4; 1.53A {Proteus mirabilis}
Probab=29.55 E-value=1.3e+02 Score=33.05 Aligned_cols=19 Identities=42% Similarity=0.270 Sum_probs=15.9
Q ss_pred HhhHHHHHHcCCcEEEEcC
Q 002281 277 EEGLKWLMEKGYKTIVDIR 295 (943)
Q Consensus 277 ~eDLa~Lk~lGIKTVIDLR 295 (943)
.++++.+++.|++|||+..
T Consensus 78 ~~el~~~~~aGv~tiV~~~ 96 (365)
T 3rhg_A 78 IFELNNFKELGGKTIVDAT 96 (365)
T ss_dssp HHHHHHHHHTTEEEEEECC
T ss_pred HHHHHHHHhcCCCeEEEcC
Confidence 3567888888999999998
No 223
>3klo_A Transcriptional regulator VPST; REC domain, HTH domain, DNA-binding, transcription regulation; HET: C2E TAR; 2.80A {Vibrio cholerae} PDB: 3kln_A*
Probab=29.48 E-value=1.8e+02 Score=28.30 Aligned_cols=59 Identities=5% Similarity=0.092 Sum_probs=40.0
Q ss_pred CccEEEE----EcCCc-hHHHHhhhccCCCCcEEEEe-------------CCCCcccC-CCCchhHHHHHHHHHcCCC
Q 002281 755 RVDFVAC----LGGDG-VILHASNLFRGAVPPVISFN-------------LGSLGFLT-SHPFEDYRQDLRQVIYGNN 813 (943)
Q Consensus 755 ~~DlVIv----LGGDG-TiL~Aar~~~~~~~PVLGIN-------------~GsLGFLt-~~~~ed~~~~L~~ll~G~~ 813 (943)
.+|+||+ -|+|| .+++..+......+||+-+. .|--|||. +++++++..+++.++.|..
T Consensus 54 ~~dlvllD~~mp~~~G~~~~~~lr~~~~~~~~ii~lt~~~~~~~~~~~~~~Ga~~~l~Kp~~~~~L~~~i~~~~~~~~ 131 (225)
T 3klo_A 54 SIQMLVIDYSRISDDVLTDYSSFKHISCPDAKEVIINCPQDIEHKLLFKWNNLAGVFYIDDDMDTLIKGMSKILQDEM 131 (225)
T ss_dssp GCCEEEEEGGGCCHHHHHHHHHHHHHHCTTCEEEEEEECTTCCHHHHTTSTTEEEEEETTCCHHHHHHHHHHHHTTCC
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHhhCCCCcEEEEECCcchhHHHHHHHhCCCEEEecCCCHHHHHHHHHHHHCCCE
Confidence 4788886 36677 34555544123467887653 35667776 5788999999999998863
No 224
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=29.02 E-value=1.3e+02 Score=26.36 Aligned_cols=101 Identities=14% Similarity=0.064 Sum_probs=56.2
Q ss_pred CCEEEEEecCChhHHHHHHHHHHHHhcCCCeEEEEcCChhhhhhcCCCCccceeeeccCccccccCccEEEEE----cCC
Q 002281 690 PRTVLVLKKPGPALMEEAKEVASFLYHQEKMNILVEPDVHDIFARIPGFGFVQTFYLQDTSDLHERVDFVACL----GGD 765 (943)
Q Consensus 690 pk~VlIv~K~~~~~~~~a~~l~~~L~~~~g~~V~ve~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~DlVIvL----GGD 765 (943)
+.+|+||-... .. ...+.++|.+ .+..|..-.+..+.+..+ . ...+|+||+= ++|
T Consensus 7 ~~~ilivdd~~-~~---~~~l~~~L~~-~~~~v~~~~~~~~a~~~l--------------~--~~~~dlvi~d~~l~~~~ 65 (137)
T 3hdg_A 7 ALKILIVEDDT-DA---REWLSTIISN-HFPEVWSAGDGEEGERLF--------------G--LHAPDVIITDIRMPKLG 65 (137)
T ss_dssp CCCEEEECSCH-HH---HHHHHHHHHT-TCSCEEEESSHHHHHHHH--------------H--HHCCSEEEECSSCSSSC
T ss_pred ccEEEEEeCCH-HH---HHHHHHHHHh-cCcEEEEECCHHHHHHHH--------------h--ccCCCEEEEeCCCCCCC
Confidence 45688776533 22 2334445543 455565544444332210 0 1246777652 445
Q ss_pred c-hHHHHhhhccCCCCcEEEEeC-------------CCCcccC-CCCchhHHHHHHHHHcCC
Q 002281 766 G-VILHASNLFRGAVPPVISFNL-------------GSLGFLT-SHPFEDYRQDLRQVIYGN 812 (943)
Q Consensus 766 G-TiL~Aar~~~~~~~PVLGIN~-------------GsLGFLt-~~~~ed~~~~L~~ll~G~ 812 (943)
| .+++..+.. ...+||+-+.. |-.+||. +++++++...|++++++.
T Consensus 66 g~~~~~~l~~~-~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~kP~~~~~l~~~i~~~~~~~ 126 (137)
T 3hdg_A 66 GLEMLDRIKAG-GAKPYVIVISAFSEMKYFIKAIELGVHLFLPKPIEPGRLMETLEDFRHIK 126 (137)
T ss_dssp HHHHHHHHHHT-TCCCEEEECCCCCCHHHHHHHHHHCCSEECCSSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhc-CCCCcEEEEecCcChHHHHHHHhCCcceeEcCCCCHHHHHHHHHHHHHHH
Confidence 5 344444443 24678876532 6677776 578899999999988765
No 225
>1srr_A SPO0F, sporulation response regulatory protein; aspartate pocket, two component system; 1.90A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 1pey_A 3q15_C 2ftk_E* 1fsp_A 1nat_A 1pux_A 2fsp_A 2jvj_A 2jvk_A 2jvi_A 1f51_E
Probab=28.98 E-value=2.4e+02 Score=24.02 Aligned_cols=56 Identities=23% Similarity=0.392 Sum_probs=35.1
Q ss_pred CccEEEE---E-cCCch-HHHHhhhccCCCCcEEEEeC-------------CCCcccC-CCCchhHHHHHHHHHcC
Q 002281 755 RVDFVAC---L-GGDGV-ILHASNLFRGAVPPVISFNL-------------GSLGFLT-SHPFEDYRQDLRQVIYG 811 (943)
Q Consensus 755 ~~DlVIv---L-GGDGT-iL~Aar~~~~~~~PVLGIN~-------------GsLGFLt-~~~~ed~~~~L~~ll~G 811 (943)
.+|+||+ + |.||. +++..+.. ...+||+-+.. |-.|||. +++.+++...+++++.+
T Consensus 47 ~~dlvl~D~~l~~~~g~~~~~~l~~~-~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~i~~~~~~ 121 (124)
T 1srr_A 47 RPDLVLLDMKIPGMDGIEILKRMKVI-DENIRVIIMTAYGELDMIQESKELGALTHFAKPFDIDEIRDAVKKYLPL 121 (124)
T ss_dssp CCSEEEEESCCTTCCHHHHHHHHHHH-CTTCEEEEEESSCCHHHHHHHHHHTCCCEEESSCCHHHHHHHHHHHSCC
T ss_pred CCCEEEEecCCCCCCHHHHHHHHHHh-CCCCCEEEEEccCchHHHHHHHhcChHhhccCCCCHHHHHHHHHHHhcc
Confidence 4687775 2 45663 44544443 34678876632 5667775 57778888888777654
No 226
>1c25_A CDC25A; hydrolase, cell cycle phosphatase,dual specificity protein phosphatase, CDK2; 2.30A {Homo sapiens} SCOP: c.46.1.1
Probab=28.83 E-value=1.2e+02 Score=28.60 Aligned_cols=77 Identities=21% Similarity=0.216 Sum_probs=40.8
Q ss_pred CCCHhhHHHHHHcC------CcEEEEcCCCcccCcchhhhhHHhhhcCCcEEEEEecCCCCCCCHHHHHHHHHHH--hcC
Q 002281 274 QVTEEGLKWLMEKG------YKTIVDIRAERVKDNFYEAAIDDAILSGKVELIKIPVEVRTAPTMEQVEKFASLV--SNS 345 (943)
Q Consensus 274 qpT~eDLa~Lk~lG------IKTVIDLRse~~ee~~~~a~e~e~~e~~GI~yIhIPV~d~~~Ps~E~v~aFlelL--~ds 345 (943)
.++++++..+.+.+ =-.|||.|+.. + |. .....|. +|+|+. +....+.... ...
T Consensus 24 ~is~~el~~~l~~~~~~~~~~~~liDvR~~~-e---~~-----~ghIpgA--inip~~-------~~~~~~~~~~~~~~~ 85 (161)
T 1c25_A 24 YISPEIMASVLNGKFANLIKEFVIIDCRYPY-E---YE-----GGHIKGA--VNLHME-------EEVEDFLLKKPIVPT 85 (161)
T ss_dssp EECHHHHHHHHTTTTTTTEEEEEEEECSCHH-H---HH-----TCEETTC--EECCSH-------HHHHHHTTTSCCCCC
T ss_pred eeCHHHHHHHHhccccccCCCeEEEECCChH-H---cc-----CCcccCc--EeCChh-------HHHHHHHhhhhhccC
Confidence 36888887776653 23699999864 1 11 1112232 455553 2222221110 012
Q ss_pred CCCcE--EEeCc-cCCchHHHHHHHHH
Q 002281 346 SKKPL--YLHSK-EGVWRTYAMVSRWR 369 (943)
Q Consensus 346 ~~~PV--LVHC~-AGKDRTGALvaLlr 369 (943)
.++|+ ++||. +|. |+..++..++
T Consensus 86 ~~~~ivvv~yC~~sg~-rs~~aa~~L~ 111 (161)
T 1c25_A 86 DGKRVIVVFHCEFSSE-RGPRMCRYVR 111 (161)
T ss_dssp TTSEEEEEEECSSSSS-HHHHHHHHHH
T ss_pred CCCCeEEEEEcCCCCc-chHHHHHHHH
Confidence 45675 68999 887 8875555544
No 227
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=28.78 E-value=2.2e+02 Score=25.61 Aligned_cols=100 Identities=15% Similarity=0.146 Sum_probs=57.0
Q ss_pred CCEEEEEecCChhHHHHHHHHHHHHhcCCCeEEEEcCChhhhhhcCCCCccceeeeccCccccccCccEEEE----EcCC
Q 002281 690 PRTVLVLKKPGPALMEEAKEVASFLYHQEKMNILVEPDVHDIFARIPGFGFVQTFYLQDTSDLHERVDFVAC----LGGD 765 (943)
Q Consensus 690 pk~VlIv~K~~~~~~~~a~~l~~~L~~~~g~~V~ve~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~DlVIv----LGGD 765 (943)
..+|+||-.... ....+..+|.+ .|+.|..-.+..+.+..+. ...+|+||+ -|+|
T Consensus 14 ~~~ILivdd~~~----~~~~l~~~L~~-~g~~v~~~~~~~~a~~~l~----------------~~~~dlvi~D~~l~~~~ 72 (153)
T 3hv2_A 14 RPEILLVDSQEV----ILQRLQQLLSP-LPYTLHFARDATQALQLLA----------------SREVDLVISAAHLPQMD 72 (153)
T ss_dssp CCEEEEECSCHH----HHHHHHHHHTT-SSCEEEEESSHHHHHHHHH----------------HSCCSEEEEESCCSSSC
T ss_pred CceEEEECCCHH----HHHHHHHHhcc-cCcEEEEECCHHHHHHHHH----------------cCCCCEEEEeCCCCcCc
Confidence 467888854331 23345556654 4777776555444332110 124677776 2556
Q ss_pred ch-HHHHhhhccCCCCcEEEEeC-------------C-CCcccC-CCCchhHHHHHHHHHcC
Q 002281 766 GV-ILHASNLFRGAVPPVISFNL-------------G-SLGFLT-SHPFEDYRQDLRQVIYG 811 (943)
Q Consensus 766 GT-iL~Aar~~~~~~~PVLGIN~-------------G-sLGFLt-~~~~ed~~~~L~~ll~G 811 (943)
|. +++..+.. ...+||+-+.. | -.+||. +++.+++...|++++++
T Consensus 73 g~~~~~~l~~~-~~~~~ii~~s~~~~~~~~~~~~~~g~~~~~l~KP~~~~~l~~~i~~~l~~ 133 (153)
T 3hv2_A 73 GPTLLARIHQQ-YPSTTRILLTGDPDLKLIAKAINEGEIYRYLSKPWDDQELLLALRQALEH 133 (153)
T ss_dssp HHHHHHHHHHH-CTTSEEEEECCCCCHHHHHHHHHTTCCSEEECSSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhH-CCCCeEEEEECCCCHHHHHHHHhCCCcceEEeCCCCHHHHHHHHHHHHHH
Confidence 62 34444442 34678876542 5 566776 46788888888887764
No 228
>3cnb_A DNA-binding response regulator, MERR family; signal receiver domain, DNA binding protein, protein structu initiative, PSI-2; 2.00A {Colwellia psychrerythraea}
Probab=28.57 E-value=2e+02 Score=25.04 Aligned_cols=58 Identities=24% Similarity=0.257 Sum_probs=37.0
Q ss_pred CccEEEEE----cCCch-HHHHhhhc-cCCCCcEEEEe-------------CCCCcccC-CCCchhHHHHHHHHHcCC
Q 002281 755 RVDFVACL----GGDGV-ILHASNLF-RGAVPPVISFN-------------LGSLGFLT-SHPFEDYRQDLRQVIYGN 812 (943)
Q Consensus 755 ~~DlVIvL----GGDGT-iL~Aar~~-~~~~~PVLGIN-------------~GsLGFLt-~~~~ed~~~~L~~ll~G~ 812 (943)
.+|+||+= +.||. +++..+.. ....+||+-+. .|-.+||. +++.+++...+++++++.
T Consensus 54 ~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~kP~~~~~l~~~i~~~~~~~ 131 (143)
T 3cnb_A 54 KPDVVMLDLMMVGMDGFSICHRIKSTPATANIIVIAMTGALTDDNVSRIVALGAETCFGKPLNFTLLEKTIKQLVEQK 131 (143)
T ss_dssp CCSEEEEETTCTTSCHHHHHHHHHTSTTTTTSEEEEEESSCCHHHHHHHHHTTCSEEEESSCCHHHHHHHHHHHHHTT
T ss_pred CCCEEEEecccCCCcHHHHHHHHHhCccccCCcEEEEeCCCCHHHHHHHHhcCCcEEEeCCCCHHHHHHHHHHHHHhh
Confidence 46777763 44552 34444432 23467888664 35667776 578889999999888765
No 229
>3l18_A Intracellular protease I; gatase1_PFPI_LIKE, hydrolase; 1.78A {Thermococcus onnurineus} SCOP: c.23.16.2 PDB: 1g2i_A
Probab=27.93 E-value=1.4e+02 Score=28.25 Aligned_cols=95 Identities=16% Similarity=0.105 Sum_probs=48.8
Q ss_pred CCEEEEEecCChhHHHHHHHHHHHHhcCCCeEEEEcCChhhhhhcCCCCccceeeeccCcccc-ccCccEEEEEcCCchH
Q 002281 690 PRTVLVLKKPGPALMEEAKEVASFLYHQEKMNILVEPDVHDIFARIPGFGFVQTFYLQDTSDL-HERVDFVACLGGDGVI 768 (943)
Q Consensus 690 pk~VlIv~K~~~~~~~~a~~l~~~L~~~~g~~V~ve~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~DlVIvLGGDGTi 768 (943)
.++|+|+.-++-+..+.+. ..+.|.. .+++|.+-......+....+. ........++. ...+|.||+-||.|+.
T Consensus 2 ~~ki~il~~~g~~~~e~~~-~~~~l~~-ag~~v~~vs~~~~~v~~~~g~---~i~~~~~~~~~~~~~~D~livpGG~~~~ 76 (168)
T 3l18_A 2 SMKVLFLSADGFEDLELIY-PLHRIKE-EGHEVYVASFQRGKITGKHGY---SVNVDLTFEEVDPDEFDALVLPGGKAPE 76 (168)
T ss_dssp CCEEEEECCTTBCHHHHHH-HHHHHHH-TTCEEEEEESSSEEEECTTSC---EEEECEEGGGCCGGGCSEEEECCBSHHH
T ss_pred CcEEEEEeCCCccHHHHHH-HHHHHHH-CCCEEEEEECCCCEEecCCCc---EEeccCChhHCCHhhCCEEEECCCcCHH
Confidence 3678888877755444332 3333332 356554322111111111111 11111112232 2468999999998753
Q ss_pred --------HHHhhhccCCCCcEEEEeCCC
Q 002281 769 --------LHASNLFRGAVPPVISFNLGS 789 (943)
Q Consensus 769 --------L~Aar~~~~~~~PVLGIN~Gs 789 (943)
+...+.+.....||.+|-.|.
T Consensus 77 ~~~~~~~l~~~l~~~~~~~k~i~aiC~G~ 105 (168)
T 3l18_A 77 IVRLNEKAVMITRRMFEDDKPVASICHGP 105 (168)
T ss_dssp HHTTCHHHHHHHHHHHHTTCCEEEETTTH
T ss_pred HhccCHHHHHHHHHHHHCCCEEEEECHhH
Confidence 344455555678999998874
No 230
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=27.50 E-value=43 Score=36.57 Aligned_cols=58 Identities=17% Similarity=0.193 Sum_probs=43.6
Q ss_pred cccccCccEEEEEcCCchHHHHhhhccCCCCcEEEEeCC-------------CCcccCC---CCchhHHHHHHHHHcC
Q 002281 750 SDLHERVDFVACLGGDGVILHASNLFRGAVPPVISFNLG-------------SLGFLTS---HPFEDYRQDLRQVIYG 811 (943)
Q Consensus 750 ~~l~~~~DlVIvLGGDGTiL~Aar~~~~~~~PVLGIN~G-------------sLGFLt~---~~~ed~~~~L~~ll~G 811 (943)
.++...+|++|+=||=||++.++.. ++|++.+..+ ..|++.+ .+.+++.++|.++++.
T Consensus 330 ~~ll~~ad~~V~~~G~~t~~Ea~~~----G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~~ 403 (441)
T 2yjn_A 330 HALLPTCAATVHHGGPGSWHTAAIH----GVPQVILPDGWDTGVRAQRTQEFGAGIALPVPELTPDQLRESVKRVLDD 403 (441)
T ss_dssp HHHGGGCSEEEECCCHHHHHHHHHT----TCCEEECCCSHHHHHHHHHHHHHTSEEECCTTTCCHHHHHHHHHHHHHC
T ss_pred HHHHhhCCEEEECCCHHHHHHHHHh----CCCEEEeCCcccHHHHHHHHHHcCCEEEcccccCCHHHHHHHHHHHhcC
Confidence 3456789999999999999998764 5799888542 3566554 3667888888888754
No 231
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=27.21 E-value=1.3e+02 Score=32.11 Aligned_cols=57 Identities=16% Similarity=0.199 Sum_probs=41.1
Q ss_pred ccccCccEEEEEcCCchHHHHhhhccCCCCcEEEEeCC-------------CCcccCC---CCchhHHHHHHHHHcC
Q 002281 751 DLHERVDFVACLGGDGVILHASNLFRGAVPPVISFNLG-------------SLGFLTS---HPFEDYRQDLRQVIYG 811 (943)
Q Consensus 751 ~l~~~~DlVIvLGGDGTiL~Aar~~~~~~~PVLGIN~G-------------sLGFLt~---~~~ed~~~~L~~ll~G 811 (943)
++...+|++|+-||=||++.++.. ++|++.+-.. ..|.+.. ++.+++.+++.++++.
T Consensus 309 ~ll~~ad~~v~~~G~~t~~Ea~~~----G~P~v~~p~~~~q~~~a~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~~ 381 (415)
T 3rsc_A 309 KVLEQATVCVTHGGMGTLMEALYW----GRPLVVVPQSFDVQPMARRVDQLGLGAVLPGEKADGDTLLAAVGAVAAD 381 (415)
T ss_dssp HHHHHEEEEEESCCHHHHHHHHHT----TCCEEECCCSGGGHHHHHHHHHHTCEEECCGGGCCHHHHHHHHHHHHTC
T ss_pred HHHhhCCEEEECCcHHHHHHHHHh----CCCEEEeCCcchHHHHHHHHHHcCCEEEcccCCCCHHHHHHHHHHHHcC
Confidence 556779999999999999988754 5788876331 3454443 3567788888888754
No 232
>2ywj_A Glutamine amidotransferase subunit PDXT; uncharacterized conserved protein, structural genomics; 1.90A {Methanocaldococcus jannaschii}
Probab=27.14 E-value=85 Score=30.43 Aligned_cols=35 Identities=17% Similarity=0.334 Sum_probs=24.3
Q ss_pred cCccEEEEEcCCchHHHH-------hhhccCCCCcEEEEeCC
Q 002281 754 ERVDFVACLGGDGVILHA-------SNLFRGAVPPVISFNLG 788 (943)
Q Consensus 754 ~~~DlVIvLGGDGTiL~A-------ar~~~~~~~PVLGIN~G 788 (943)
..+|.||.-||-++.... ...+...++||+||-.|
T Consensus 36 ~~~dglil~GG~~~~~~~~~~~~~~~~~i~~~~~PilGIC~G 77 (186)
T 2ywj_A 36 EGIDALIIPGGESTAIGKLMKKYGLLEKIKNSNLPILGTCAG 77 (186)
T ss_dssp TTCSEEEECCSCHHHHHHHHHHTTHHHHHHTCCCCEEEETHH
T ss_pred ccCCEEEECCCCchhhhhhhhccCHHHHHHhcCCcEEEECHH
Confidence 457999999997765421 11222567899999887
No 233
>2qsj_A DNA-binding response regulator, LUXR family; structural genomics, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi dss-3}
Probab=26.87 E-value=2.7e+02 Score=24.87 Aligned_cols=58 Identities=17% Similarity=0.183 Sum_probs=36.6
Q ss_pred CccEEEE----EcCCc-hHHHHhhhccCCCCcEEEEe-------------CCCCcccC-CCCchhHHHHHHHHHcCCC
Q 002281 755 RVDFVAC----LGGDG-VILHASNLFRGAVPPVISFN-------------LGSLGFLT-SHPFEDYRQDLRQVIYGNN 813 (943)
Q Consensus 755 ~~DlVIv----LGGDG-TiL~Aar~~~~~~~PVLGIN-------------~GsLGFLt-~~~~ed~~~~L~~ll~G~~ 813 (943)
.+|+||+ -+.|| .+++..+.. ...+||+-+. .|-.|||. +++.+++...|.+++.+..
T Consensus 50 ~~dlvi~d~~l~~~~g~~~~~~l~~~-~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~kp~~~~~L~~~l~~~~~~~~ 126 (154)
T 2qsj_A 50 TVDLILLDVNLPDAEAIDGLVRLKRF-DPSNAVALISGETDHELIRAALEAGADGFIPKSADPQVLIHAVSLILEGEI 126 (154)
T ss_dssp CCSEEEECC------CHHHHHHHHHH-CTTSEEEEC-----CHHHHHHHHTTCCBBCCTTSCHHHHHHHHHHHHTTCC
T ss_pred CCCEEEEeCCCCCCchHHHHHHHHHh-CCCCeEEEEeCCCCHHHHHHHHHccCCEEEeCCCCHHHHHHHHHHHHcCCE
Confidence 4677775 24466 245555543 3457887653 36678877 4788899999999998764
No 234
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=25.96 E-value=2.9e+02 Score=23.95 Aligned_cols=56 Identities=18% Similarity=0.205 Sum_probs=36.3
Q ss_pred CccEEEEE-----cCCch-HHHHhhhccCCCCcEEEEeC-------------CCCcccC-CCCchhHHHHHHHHHcCC
Q 002281 755 RVDFVACL-----GGDGV-ILHASNLFRGAVPPVISFNL-------------GSLGFLT-SHPFEDYRQDLRQVIYGN 812 (943)
Q Consensus 755 ~~DlVIvL-----GGDGT-iL~Aar~~~~~~~PVLGIN~-------------GsLGFLt-~~~~ed~~~~L~~ll~G~ 812 (943)
.+|+||+= +.||. +++..+.. ..+||+-+.. |-.+||. +++.+++...+++++++.
T Consensus 54 ~~dlii~d~~~~~~~~g~~~~~~l~~~--~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~kp~~~~~l~~~i~~~~~~~ 129 (140)
T 3cg0_A 54 RPDIALVDIMLCGALDGVETAARLAAG--CNLPIIFITSSQDVETFQRAKRVNPFGYLAKPVAADTLHRSIEMAIHKK 129 (140)
T ss_dssp CCSEEEEESSCCSSSCHHHHHHHHHHH--SCCCEEEEECCCCHHHHHHHHTTCCSEEEEESCCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEecCCCCCCCHHHHHHHHHhC--CCCCEEEEecCCCHHHHHHHHhcCCCEEEeCCCCHHHHHHHHHHHHhcc
Confidence 46888763 35663 55555544 4678876632 5566666 567788888888887654
No 235
>3olh_A MST, 3-mercaptopyruvate sulfurtransferase; structural genomics, structural genomics consortium, SGC, RH fold; 2.50A {Homo sapiens}
Probab=25.75 E-value=2.7e+02 Score=29.35 Aligned_cols=93 Identities=6% Similarity=-0.045 Sum_probs=47.9
Q ss_pred CCCHhhHHHHHHcC----CcEEEEcCCCcccCcchhhhhHHhhhcCCcEEEEEecCCC---------CCCCHHHHHHHHH
Q 002281 274 QVTEEGLKWLMEKG----YKTIVDIRAERVKDNFYEAAIDDAILSGKVELIKIPVEVR---------TAPTMEQVEKFAS 340 (943)
Q Consensus 274 qpT~eDLa~Lk~lG----IKTVIDLRse~~ee~~~~a~e~e~~e~~GI~yIhIPV~d~---------~~Ps~E~v~aFle 340 (943)
.++++++..+.+.+ =-.|||.|..-.........+-..-...|- +++|+... ..|+.+.+.+.+.
T Consensus 23 lIs~~~l~~~l~~~~~~~~~~ilDvR~~~~~~~~~~~~ey~~gHIpGA--i~i~~~~~~~~~~~~~~~lp~~~~~~~~~~ 100 (302)
T 3olh_A 23 MVSAQWVAEALRAPRAGQPLQLLDASWYLPKLGRDARREFEERHIPGA--AFFDIDQCSDRTSPYDHMLPGAEHFAEYAG 100 (302)
T ss_dssp EECHHHHHHHHHCCCSSCCEEEEECCCCCCC--CCHHHHHHHSCCTTC--EECCTTTSSCSSCSSSSCCCCHHHHHHHHH
T ss_pred ccCHHHHHHHhcCcCCCCCEEEEEeecCCCccCcccHHHHhhCcCCCC--eEeCHHHhcCcCCCCCCCCCCHHHHHHHHH
Confidence 36788887776653 347999994310000000011111223443 45555421 1256677776666
Q ss_pred HHhcCCCCcEEEeCccC--CchHHHHHHHH
Q 002281 341 LVSNSSKKPLYLHSKEG--VWRTYAMVSRW 368 (943)
Q Consensus 341 lL~ds~~~PVLVHC~AG--KDRTGALvaLl 368 (943)
-+--..+.+|+|+|..+ .-++.-++.++
T Consensus 101 ~lgi~~~~~VVvyc~~~~g~~~a~ra~~~L 130 (302)
T 3olh_A 101 RLGVGAATHVVIYDASDQGLYSAPRVWWMF 130 (302)
T ss_dssp HTTCCSSCEEEEECCCTTSCSSHHHHHHHH
T ss_pred HcCCCCCCEEEEEeCCCCCcchHHHHHHHH
Confidence 54224577999999753 33455444444
No 236
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=25.74 E-value=3e+02 Score=24.02 Aligned_cols=101 Identities=14% Similarity=0.257 Sum_probs=57.6
Q ss_pred CCEEEEEecCChhHHHHHHHHHHHHhcCCCeEEEEcCChhhhhhcCCCCccceeeeccCccccccCccEEEEE---cCCc
Q 002281 690 PRTVLVLKKPGPALMEEAKEVASFLYHQEKMNILVEPDVHDIFARIPGFGFVQTFYLQDTSDLHERVDFVACL---GGDG 766 (943)
Q Consensus 690 pk~VlIv~K~~~~~~~~a~~l~~~L~~~~g~~V~ve~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~DlVIvL---GGDG 766 (943)
..+|+||-... . ....+..+|.+ .|++|..-.+..+.+..+. ...+|+||+= |.||
T Consensus 4 ~~~iLivdd~~-~---~~~~l~~~L~~-~g~~v~~~~~~~~a~~~l~----------------~~~~dlvi~d~~~~~~g 62 (142)
T 2qxy_A 4 TPTVMVVDESR-I---TFLAVKNALEK-DGFNVIWAKNEQEAFTFLR----------------REKIDLVFVDVFEGEES 62 (142)
T ss_dssp CCEEEEECSCH-H---HHHHHHHHHGG-GTCEEEEESSHHHHHHHHT----------------TSCCSEEEEECTTTHHH
T ss_pred CCeEEEEeCCH-H---HHHHHHHHHHh-CCCEEEEECCHHHHHHHHh----------------ccCCCEEEEeCCCCCcH
Confidence 45788885432 2 23344555543 5788776555444332111 1246877763 3344
Q ss_pred h-HHHHhhhccCCCCcEEEEeC-------------CCCcccC-CCCchhHHHHHHHHHcCC
Q 002281 767 V-ILHASNLFRGAVPPVISFNL-------------GSLGFLT-SHPFEDYRQDLRQVIYGN 812 (943)
Q Consensus 767 T-iL~Aar~~~~~~~PVLGIN~-------------GsLGFLt-~~~~ed~~~~L~~ll~G~ 812 (943)
. +++..+.. ...+||+-+.. |-.+||. +++.+++...+++++.+.
T Consensus 63 ~~~~~~l~~~-~~~~pii~ls~~~~~~~~~~~~~~g~~~~l~kP~~~~~l~~~i~~~~~~~ 122 (142)
T 2qxy_A 63 LNLIRRIREE-FPDTKVAVLSAYVDKDLIINSVKAGAVDYILKPFRLDYLLERVKKIISST 122 (142)
T ss_dssp HHHHHHHHHH-CTTCEEEEEESCCCHHHHHHHHHHTCSCEEESSCCHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHH-CCCCCEEEEECCCCHHHHHHHHHCCcceeEeCCCCHHHHHHHHHHHHhhc
Confidence 2 34444432 34678887642 6677776 478889999999888765
No 237
>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp}
Probab=25.43 E-value=88 Score=34.99 Aligned_cols=67 Identities=15% Similarity=0.303 Sum_probs=40.6
Q ss_pred CCCHhhHHHHHHcCCcEEEEcCCCcccCcchhhhhHHhhhcCCcEEEEEecCCCCCCCHHHHHHHHHHHhcCCCCcEEEe
Q 002281 274 QVTEEGLKWLMEKGYKTIVDIRAERVKDNFYEAAIDDAILSGKVELIKIPVEVRTAPTMEQVEKFASLVSNSSKKPLYLH 353 (943)
Q Consensus 274 qpT~eDLa~Lk~lGIKTVIDLRse~~ee~~~~a~e~e~~e~~GI~yIhIPV~d~~~Ps~E~v~aFlelL~ds~~~PVLVH 353 (943)
.+++++++.+.+.+ .|||.|+.. + |. .-...|- +++|+.. .+..++..+- ..+.||+++
T Consensus 274 ~is~~~l~~~l~~~--~iiD~R~~~-~---y~-----~ghIpGA--~~i~~~~-------~~~~~~~~l~-~~~~~vvvy 332 (474)
T 3tp9_A 274 DLPPERVRAWREGG--VVLDVRPAD-A---FA-----KRHLAGS--LNIPWNK-------SFVTWAGWLL-PADRPIHLL 332 (474)
T ss_dssp CCCGGGHHHHHHTS--EEEECSCHH-H---HH-----HSEETTC--EECCSST-------THHHHHHHHC-CSSSCEEEE
T ss_pred eeCHHHHHHHhCCC--EEEECCChH-H---Hh-----ccCCCCe--EEECcch-------HHHHHHHhcC-CCCCeEEEE
Confidence 57888888777667 999999754 1 11 1122332 3445431 3444444442 457799999
Q ss_pred CccCCchHH
Q 002281 354 SKEGVWRTY 362 (943)
Q Consensus 354 C~AGKDRTG 362 (943)
|..|. +..
T Consensus 333 ~~~~~-~~~ 340 (474)
T 3tp9_A 333 AADAI-APD 340 (474)
T ss_dssp CCTTT-HHH
T ss_pred ECCCc-HHH
Confidence 99886 444
No 238
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=25.18 E-value=1.4e+02 Score=28.07 Aligned_cols=58 Identities=22% Similarity=0.317 Sum_probs=39.7
Q ss_pred ccccCccEEEEE---cCCc-hHHHHhhhccCCCCcEEEEeC---------CCCcccCCCCchhHHHHHHHHHcCC
Q 002281 751 DLHERVDFVACL---GGDG-VILHASNLFRGAVPPVISFNL---------GSLGFLTSHPFEDYRQDLRQVIYGN 812 (943)
Q Consensus 751 ~l~~~~DlVIvL---GGDG-TiL~Aar~~~~~~~PVLGIN~---------GsLGFLt~~~~ed~~~~L~~ll~G~ 812 (943)
++...+|++|.. .|=| +++.|.. .++||+..+. |..|++..-+.+++.++|.++++..
T Consensus 93 ~~~~~adi~v~ps~~e~~~~~~~Eama----~G~PvI~~~~~~~~e~i~~~~~g~~~~~d~~~l~~~i~~l~~~~ 163 (177)
T 2f9f_A 93 DLYSRCKGLLCTAKDEDFGLTPIEAMA----SGKPVIAVNEGGFKETVINEKTGYLVNADVNEIIDAMKKVSKNP 163 (177)
T ss_dssp HHHHHCSEEEECCSSCCSCHHHHHHHH----TTCCEEEESSHHHHHHCCBTTTEEEECSCHHHHHHHHHHHHHCT
T ss_pred HHHHhCCEEEeCCCcCCCChHHHHHHH----cCCcEEEeCCCCHHHHhcCCCccEEeCCCHHHHHHHHHHHHhCH
Confidence 455678998872 2444 4544433 3679998776 4577777667888999999988643
No 239
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=24.84 E-value=2.1e+02 Score=24.77 Aligned_cols=58 Identities=17% Similarity=0.224 Sum_probs=38.7
Q ss_pred CccEEEE----EcCCc-hHHHHhhhccCCCCcEEEEe-------------CCCCcccC-CCCchhHHHHHHHHHcCCC
Q 002281 755 RVDFVAC----LGGDG-VILHASNLFRGAVPPVISFN-------------LGSLGFLT-SHPFEDYRQDLRQVIYGNN 813 (943)
Q Consensus 755 ~~DlVIv----LGGDG-TiL~Aar~~~~~~~PVLGIN-------------~GsLGFLt-~~~~ed~~~~L~~ll~G~~ 813 (943)
.+|+||+ -|.|| .+++..+.. ...+||+-+. .|-.|||. +++.+++..+++++++|..
T Consensus 46 ~~dlii~d~~l~~~~g~~~~~~l~~~-~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~kp~~~~~l~~~i~~~~~~~~ 122 (134)
T 3f6c_A 46 KPDIVIIDVDIPGVNGIQVLETLRKR-QYSGIIIIVSAKNDHFYGKHCADAGANGFVSKKEGMNNIIAAIEAAKNGYC 122 (134)
T ss_dssp CCSEEEEETTCSSSCHHHHHHHHHHT-TCCSEEEEEECC---CTHHHHHHTTCSEEEEGGGCTHHHHHHHHHHHTTCC
T ss_pred CCCEEEEecCCCCCChHHHHHHHHhc-CCCCeEEEEeCCCChHHHHHHHHhCCCEEEeCCCCHHHHHHHHHHHHCCCE
Confidence 4687776 25566 345555543 3457887653 26677776 4788999999999998763
No 240
>3gra_A Transcriptional regulator, ARAC family; transcription regulator, PSI-II, structural genomics structure initiative; 2.30A {Pseudomonas putida}
Probab=24.73 E-value=1.3e+02 Score=29.96 Aligned_cols=37 Identities=14% Similarity=0.060 Sum_probs=28.2
Q ss_pred ccCccEEEEEcCCch------HHHHhhhccCCCCcEEEEeCCC
Q 002281 753 HERVDFVACLGGDGV------ILHASNLFRGAVPPVISFNLGS 789 (943)
Q Consensus 753 ~~~~DlVIvLGGDGT------iL~Aar~~~~~~~PVLGIN~Gs 789 (943)
...+|+||+-||.|. ++...+.+.....+|.+|-.|.
T Consensus 69 ~~~~D~livpGG~~~~~~~~~l~~~l~~~~~~g~~iaaIC~G~ 111 (202)
T 3gra_A 69 LKELDLLVVCGGLRTPLKYPELDRLLNDCAAHGMALGGLWNGA 111 (202)
T ss_dssp GTTCSEEEEECCTTCCSCCTTHHHHHHHHHHHTCEEEEETTHH
T ss_pred CCCCCEEEEeCCCchhhccHHHHHHHHHHHhhCCEEEEECHHH
Confidence 357899999999864 5666666655678999988874
No 241
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=24.61 E-value=2.3e+02 Score=24.93 Aligned_cols=56 Identities=13% Similarity=0.228 Sum_probs=34.5
Q ss_pred CccEEEE----EcCCc-hHHHHhhhc-cCCCCcEEEEeC-------------CCCcccC-CC-CchhHHHHHHHHHc
Q 002281 755 RVDFVAC----LGGDG-VILHASNLF-RGAVPPVISFNL-------------GSLGFLT-SH-PFEDYRQDLRQVIY 810 (943)
Q Consensus 755 ~~DlVIv----LGGDG-TiL~Aar~~-~~~~~PVLGIN~-------------GsLGFLt-~~-~~ed~~~~L~~ll~ 810 (943)
.+|+||+ -|+|| .+++..+.. ....+||+-+.. |-.+||. ++ +.+++...|+++++
T Consensus 51 ~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~pii~~s~~~~~~~~~~~~~~ga~~~l~Kp~~~~~~l~~~i~~~l~ 127 (144)
T 3kht_A 51 KYDLIILDIGLPIANGFEVMSAVRKPGANQHTPIVILTDNVSDDRAKQCMAAGASSVVDKSSNNVTDFYGRIYAIFS 127 (144)
T ss_dssp CCSEEEECTTCGGGCHHHHHHHHHSSSTTTTCCEEEEETTCCHHHHHHHHHTTCSEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHhcccccCCCEEEEeCCCCHHHHHHHHHcCCCEEEECCCCcHHHHHHHHHHHHH
Confidence 4677776 24556 244444442 134678887652 6677776 45 77788888877764
No 242
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=24.36 E-value=2.9e+02 Score=24.20 Aligned_cols=102 Identities=15% Similarity=0.202 Sum_probs=56.6
Q ss_pred CEEEEEecCChhHHHHHHHHHHHHhcCCCeEEEEcCChhhhhhcCCCCccceeeeccCccccccCccEEEE----EcCCc
Q 002281 691 RTVLVLKKPGPALMEEAKEVASFLYHQEKMNILVEPDVHDIFARIPGFGFVQTFYLQDTSDLHERVDFVAC----LGGDG 766 (943)
Q Consensus 691 k~VlIv~K~~~~~~~~a~~l~~~L~~~~g~~V~ve~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~DlVIv----LGGDG 766 (943)
.+|+||-... .. ...+..+|.+ .+..|..-.+..+.+..+ ......+|+||+ -++||
T Consensus 4 ~~ilivdd~~-~~---~~~l~~~l~~-~g~~v~~~~~~~~a~~~~--------------~~~~~~~dlvi~d~~l~~~~g 64 (143)
T 3jte_A 4 AKILVIDDES-TI---LQNIKFLLEI-DGNEVLTASSSTEGLRIF--------------TENCNSIDVVITDMKMPKLSG 64 (143)
T ss_dssp CEEEEECSCH-HH---HHHHHHHHHH-TTCEEEEESSHHHHHHHH--------------HHTTTTCCEEEEESCCSSSCH
T ss_pred CEEEEEcCCH-HH---HHHHHHHHHh-CCceEEEeCCHHHHHHHH--------------HhCCCCCCEEEEeCCCCCCcH
Confidence 4788875432 22 2234444433 467776555544332110 000235687776 24566
Q ss_pred -hHHHHhhhccCCCCcEEEEeC-------------CCCcccC-CCCchhHHHHHHHHHcCC
Q 002281 767 -VILHASNLFRGAVPPVISFNL-------------GSLGFLT-SHPFEDYRQDLRQVIYGN 812 (943)
Q Consensus 767 -TiL~Aar~~~~~~~PVLGIN~-------------GsLGFLt-~~~~ed~~~~L~~ll~G~ 812 (943)
.+++..+.. ...+||+-+.. |-.+||. +++.+++...|++++++.
T Consensus 65 ~~~~~~l~~~-~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~kp~~~~~l~~~l~~~~~~~ 124 (143)
T 3jte_A 65 MDILREIKKI-TPHMAVIILTGHGDLDNAILAMKEGAFEYLRKPVTAQDLSIAINNAINRK 124 (143)
T ss_dssp HHHHHHHHHH-CTTCEEEEEECTTCHHHHHHHHHTTCSEEEESSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHh-CCCCeEEEEECCCCHHHHHHHHHhCcceeEeCCCCHHHHHHHHHHHHHHH
Confidence 344545443 34578876542 5667776 478888988998887654
No 243
>1qb0_A Protein (M-phase inducer phosphatase 2 (CDC25B)); hydrolase, cell cycle phosphatase, dual specificity protein phosphatase; 1.91A {Homo sapiens} SCOP: c.46.1.1 PDB: 1cwr_A 1cws_A 2uzq_A
Probab=24.06 E-value=1.1e+02 Score=30.81 Aligned_cols=77 Identities=23% Similarity=0.272 Sum_probs=41.4
Q ss_pred CCCHhhHHHHHHcC------CcEEEEcCCCcccCcchhhhhHHhhhcCCcEEEEEecCCCCCCCHHHHHHHHH---HHhc
Q 002281 274 QVTEEGLKWLMEKG------YKTIVDIRAERVKDNFYEAAIDDAILSGKVELIKIPVEVRTAPTMEQVEKFAS---LVSN 344 (943)
Q Consensus 274 qpT~eDLa~Lk~lG------IKTVIDLRse~~ee~~~~a~e~e~~e~~GI~yIhIPV~d~~~Ps~E~v~aFle---lL~d 344 (943)
.++++++..+.+.+ =-.|||.|+.. + |. .-...|. +++|+. +....++. .+..
T Consensus 45 ~Is~~el~~~l~~~~~~~~~~~~lIDvR~~~-E---y~-----~gHIpGA--inip~~-------~l~~~~~~~~~~l~~ 106 (211)
T 1qb0_A 45 YISPETMVALLTGKFSNIVDKFVIVDCRYPY-E---YE-----GGHIKTA--VNLPLE-------RDAESFLLKSPIAPC 106 (211)
T ss_dssp EECHHHHHHHHTTTTTTTEEEEEEEECSCHH-H---HH-----TCEETTC--EECCSH-------HHHHHHHHTTTCCCS
T ss_pred eeCHHHHHHHHhcccccCCCCEEEEECCCHH-H---Hc-----cCcCCCC--EECCch-------HHHHHhhhhhhhccc
Confidence 35788887776553 23699999864 1 11 1112232 455543 22222221 1111
Q ss_pred CCCCcE--EEeCc-cCCchHHHHHHHHH
Q 002281 345 SSKKPL--YLHSK-EGVWRTYAMVSRWR 369 (943)
Q Consensus 345 s~~~PV--LVHC~-AGKDRTGALvaLlr 369 (943)
..++|+ ++||. +|. |+..++..++
T Consensus 107 ~~d~~ivvVvyC~~sG~-rs~~aa~~L~ 133 (211)
T 1qb0_A 107 SLDKRVILIFHCEFSSE-RGPRMCRFIR 133 (211)
T ss_dssp STTSEEEEEEECSSSSS-HHHHHHHHHH
T ss_pred cCCCCeEEEEECCCCCc-cHHHHHHHHH
Confidence 245787 78999 888 8775555544
No 244
>3ilh_A Two component response regulator; NYSGXRC, PSI-II, protein S initiative, structural genomics; 2.59A {Cytophaga hutchinsonii}
Probab=23.57 E-value=3.1e+02 Score=23.88 Aligned_cols=59 Identities=7% Similarity=0.016 Sum_probs=38.0
Q ss_pred cCccEEEE----EcCCc-hHHHHhhhc---cCCCCcEEEEeC-------------C-CCcccC-CCCchhHHHHHHHHHc
Q 002281 754 ERVDFVAC----LGGDG-VILHASNLF---RGAVPPVISFNL-------------G-SLGFLT-SHPFEDYRQDLRQVIY 810 (943)
Q Consensus 754 ~~~DlVIv----LGGDG-TiL~Aar~~---~~~~~PVLGIN~-------------G-sLGFLt-~~~~ed~~~~L~~ll~ 810 (943)
..+|+||+ -|+|| .+++..+.. ....+||+-+.. | -.+||. +++++++...|++...
T Consensus 59 ~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~~~ii~~t~~~~~~~~~~~~~~g~~~~~l~KP~~~~~L~~~i~~~~~ 138 (146)
T 3ilh_A 59 RWPSIICIDINMPGINGWELIDLFKQHFQPMKNKSIVCLLSSSLDPRDQAKAEASDWVDYYVSKPLTANALNNLYNKVLN 138 (146)
T ss_dssp CCCSEEEEESSCSSSCHHHHHHHHHHHCGGGTTTCEEEEECSSCCHHHHHHHHHCSSCCEEECSSCCHHHHHHHHHHHHC
T ss_pred CCCCEEEEcCCCCCCCHHHHHHHHHHhhhhccCCCeEEEEeCCCChHHHHHHHhcCCcceeeeCCCCHHHHHHHHHHHHH
Confidence 45788876 25566 355555542 234678876643 4 556776 5788889999988887
Q ss_pred CC
Q 002281 811 GN 812 (943)
Q Consensus 811 G~ 812 (943)
+.
T Consensus 139 ~~ 140 (146)
T 3ilh_A 139 EG 140 (146)
T ss_dssp C-
T ss_pred hc
Confidence 65
No 245
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=23.23 E-value=2.6e+02 Score=24.97 Aligned_cols=101 Identities=17% Similarity=0.218 Sum_probs=53.3
Q ss_pred CCEEEEEecCChhHHHHHHHHHHHHhcCCCeEEEEcCChhhhhhcCCCCccceeeeccCccccccCccEEEE----EcCC
Q 002281 690 PRTVLVLKKPGPALMEEAKEVASFLYHQEKMNILVEPDVHDIFARIPGFGFVQTFYLQDTSDLHERVDFVAC----LGGD 765 (943)
Q Consensus 690 pk~VlIv~K~~~~~~~~a~~l~~~L~~~~g~~V~ve~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~DlVIv----LGGD 765 (943)
..+|+||-... .. ...+..+|.+ .|+.|..-.+..+.+... ....+|+||+ =|+|
T Consensus 14 ~~~iLivdd~~-~~---~~~l~~~L~~-~g~~v~~~~~~~~al~~~----------------~~~~~dlvl~D~~mp~~~ 72 (143)
T 3m6m_D 14 SMRMLVADDHE-AN---RMVLQRLLEK-AGHKVLCVNGAEQVLDAM----------------AEEDYDAVIVDLHMPGMN 72 (143)
T ss_dssp -CEEEEECSSH-HH---HHHHHHHHHC---CEEEEESSHHHHHHHH----------------HHSCCSEEEEESCCSSSC
T ss_pred cceEEEEeCCH-HH---HHHHHHHHHH-cCCeEEEeCCHHHHHHHH----------------hcCCCCEEEEeCCCCCCC
Confidence 35788885322 12 2334445543 467766544433322110 0135788886 3677
Q ss_pred c-hHHHHhhhcc---CCCCcEEEEeC-------------CCCcccC-CCCchhHHHHHHHHHcC
Q 002281 766 G-VILHASNLFR---GAVPPVISFNL-------------GSLGFLT-SHPFEDYRQDLRQVIYG 811 (943)
Q Consensus 766 G-TiL~Aar~~~---~~~~PVLGIN~-------------GsLGFLt-~~~~ed~~~~L~~ll~G 811 (943)
| .+++..+... ...+||+-+.. |-.+||. +++.+++.+.|.++..+
T Consensus 73 g~~~~~~lr~~~~~~~~~~pii~~s~~~~~~~~~~~~~~Ga~~~l~KP~~~~~L~~~l~~~~~~ 136 (143)
T 3m6m_D 73 GLDMLKQLRVMQASGMRYTPVVVLSADVTPEAIRACEQAGARAFLAKPVVAAKLLDTLADLAVS 136 (143)
T ss_dssp HHHHHHHHHHHHHTTCCCCCEEEEESCCCHHHHHHHHHTTCSEEEESSCCHHHHHHHHHHHC--
T ss_pred HHHHHHHHHhchhccCCCCeEEEEeCCCCHHHHHHHHHcChhheeeCCCCHHHHHHHHHHHHHh
Confidence 7 4555555321 23468876643 5566766 57778888888877644
No 246
>3mgk_A Intracellular protease/amidase related enzyme (THIJ family); amidotranferase-like, structural genomics, PSI; 2.00A {Clostridium acetobutylicum}
Probab=23.00 E-value=1.2e+02 Score=30.48 Aligned_cols=96 Identities=11% Similarity=0.004 Sum_probs=49.1
Q ss_pred CCCEEEEEecCChhHHHHHHHHHHHHhcC-CCeEEEEcCChhhhhhcCCCCccceeeeccCccccccCccEEEEEcCCch
Q 002281 689 TPRTVLVLKKPGPALMEEAKEVASFLYHQ-EKMNILVEPDVHDIFARIPGFGFVQTFYLQDTSDLHERVDFVACLGGDGV 767 (943)
Q Consensus 689 ~pk~VlIv~K~~~~~~~~a~~l~~~L~~~-~g~~V~ve~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~DlVIvLGGDGT 767 (943)
.+++|+|+.-++-+..+.+. .++.|... .+++|.+-......+....+. ........++. ...|+||+-||.|+
T Consensus 3 ~~~~V~ill~~g~~~~e~~~-~~~~l~~a~~~~~v~~vs~~~~~V~~~~G~---~v~~d~~~~~~-~~~D~livpGG~~~ 77 (211)
T 3mgk_A 3 LSYRIDVLLFNKFETLDVFG-PVEIFGNLQDDFELNFISSDGGLVESSQKV---RVETSLYTRDE-NIEKILFVPGGSGT 77 (211)
T ss_dssp -CEEEEEECCTTCCHHHHHH-HHHHHTTCTTTEEEEEECSSCEEEECTTCC---EEEEBCCCCCS-SSEEEEEECCSTHH
T ss_pred CceEEEEEEeCCcchhHHHH-HHHHHHhCCCceEEEEEECCCCeEecCCCc---EEEeccchhhC-CCCCEEEECCCcch
Confidence 56889999887755544432 34444332 246654432211111111111 11111111222 34799999999875
Q ss_pred H--------HHHhhhccCCCCcEEEEeCCC
Q 002281 768 I--------LHASNLFRGAVPPVISFNLGS 789 (943)
Q Consensus 768 i--------L~Aar~~~~~~~PVLGIN~Gs 789 (943)
. +...+.+.....+|.+|-.|.
T Consensus 78 ~~~~~~~~~~~~l~~~~~~~k~iaaiC~G~ 107 (211)
T 3mgk_A 78 REKVNDDNFINFIGNMVKESKYIISVCTGS 107 (211)
T ss_dssp HHHTTCHHHHHHHHHHHHHCSEEEECTTHH
T ss_pred hhhcCCHHHHHHHHHHHHcCCEEEEEchHH
Confidence 3 334444545678899988764
No 247
>3q9s_A DNA-binding response regulator; DNA binding protein; 2.40A {Deinococcus radiodurans}
Probab=22.98 E-value=2.5e+02 Score=28.17 Aligned_cols=100 Identities=11% Similarity=0.144 Sum_probs=58.3
Q ss_pred CCEEEEEecCChhHHHHHHHHHHHHhcCCCeEEEEcCChhhhhhcCCCCccceeeeccCccccccCccEEEEE----cCC
Q 002281 690 PRTVLVLKKPGPALMEEAKEVASFLYHQEKMNILVEPDVHDIFARIPGFGFVQTFYLQDTSDLHERVDFVACL----GGD 765 (943)
Q Consensus 690 pk~VlIv~K~~~~~~~~a~~l~~~L~~~~g~~V~ve~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~DlVIvL----GGD 765 (943)
..+|+||-... .. ...+..+|.. .+..|..-.+..+.+..+ ....+|+||+= |+|
T Consensus 37 ~~~ILivdd~~-~~---~~~l~~~L~~-~g~~v~~~~~~~~al~~~----------------~~~~~DlvllD~~lp~~~ 95 (249)
T 3q9s_A 37 EQRILVIEDDH-DI---ANVLRMDLTD-AGYVVDHADSAMNGLIKA----------------REDHPDLILLDLGLPDFD 95 (249)
T ss_dssp CCEEEEECSCH-HH---HHHHHHHHHT-TTCEEEEESSHHHHHHHH----------------HHSCCSEEEEECCSCHHH
T ss_pred CCEEEEEECCH-HH---HHHHHHHHHH-CCCEEEEeCCHHHHHHHH----------------hcCCCCEEEEcCCCCCCC
Confidence 35788875432 22 2234445543 467666544444332110 01246887762 556
Q ss_pred c-hHHHHhhhccCCCCcEEEEeC-------------CCCcccC-CCCchhHHHHHHHHHcCC
Q 002281 766 G-VILHASNLFRGAVPPVISFNL-------------GSLGFLT-SHPFEDYRQDLRQVIYGN 812 (943)
Q Consensus 766 G-TiL~Aar~~~~~~~PVLGIN~-------------GsLGFLt-~~~~ed~~~~L~~ll~G~ 812 (943)
| .+++..+. ...+||+-+.. |-.|||. +++++++..+++.++.+.
T Consensus 96 G~~l~~~lr~--~~~~~iI~lt~~~~~~~~~~a~~~Ga~~yl~Kp~~~~~L~~~i~~~l~~~ 155 (249)
T 3q9s_A 96 GGDVVQRLRK--NSALPIIVLTARDTVEEKVRLLGLGADDYLIKPFHPDELLARVKVQLRQR 155 (249)
T ss_dssp HHHHHHHHHT--TCCCCEEEEESCCSHHHHHHHHHHTCSEEEESSCCHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHc--CCCCCEEEEECCCCHHHHHHHHHCCCcEEEECCCCHHHHHHHHHHHHhhc
Confidence 6 34444443 24578886653 6678887 478899999999999876
No 248
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=22.93 E-value=4.1e+02 Score=23.71 Aligned_cols=100 Identities=15% Similarity=0.198 Sum_probs=56.2
Q ss_pred CCEEEEEecCChhHHHHHHHHHHHHhcCCCeEEEEcCChhhhhhcCCCCccceeeeccCccccccCccEEEEE----cCC
Q 002281 690 PRTVLVLKKPGPALMEEAKEVASFLYHQEKMNILVEPDVHDIFARIPGFGFVQTFYLQDTSDLHERVDFVACL----GGD 765 (943)
Q Consensus 690 pk~VlIv~K~~~~~~~~a~~l~~~L~~~~g~~V~ve~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~DlVIvL----GGD 765 (943)
+.+|+||-... .. ...+..+|.. .|++|..-.+..+.+..+. ...+|+||+= +.|
T Consensus 3 ~~~ILivdd~~-~~---~~~l~~~L~~-~g~~v~~~~~~~~a~~~l~----------------~~~~dliild~~l~~~~ 61 (155)
T 1qkk_A 3 APSVFLIDDDR-DL---RKAMQQTLEL-AGFTVSSFASATEALAGLS----------------ADFAGIVISDIRMPGMD 61 (155)
T ss_dssp -CEEEEECSCH-HH---HHHHHHHHHH-TTCEEEEESCHHHHHHTCC----------------TTCCSEEEEESCCSSSC
T ss_pred CCEEEEEeCCH-HH---HHHHHHHHHH-cCcEEEEECCHHHHHHHHH----------------hCCCCEEEEeCCCCCCC
Confidence 35788775432 22 2334444443 4777776555544332111 1246877752 345
Q ss_pred ch-HHHHhhhccCCCCcEEEEe-------------CCCCcccC-CCCchhHHHHHHHHHcC
Q 002281 766 GV-ILHASNLFRGAVPPVISFN-------------LGSLGFLT-SHPFEDYRQDLRQVIYG 811 (943)
Q Consensus 766 GT-iL~Aar~~~~~~~PVLGIN-------------~GsLGFLt-~~~~ed~~~~L~~ll~G 811 (943)
|. +++..+.. ...+||+-+. .|-.+||. +++.+++...+..++.+
T Consensus 62 g~~~~~~l~~~-~~~~pii~ls~~~~~~~~~~~~~~g~~~~l~kP~~~~~L~~~i~~~~~~ 121 (155)
T 1qkk_A 62 GLALFRKILAL-DPDLPMILVTGHGDIPMAVQAIQDGAYDFIAKPFAADRLVQSARRAEEK 121 (155)
T ss_dssp HHHHHHHHHHH-CTTSCEEEEECGGGHHHHHHHHHTTCCEEEESSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhh-CCCCCEEEEECCCChHHHHHHHhcCCCeEEeCCCCHHHHHHHHHHHHHH
Confidence 52 34444443 3467887663 36677776 46788888888887764
No 249
>3cg4_A Response regulator receiver domain protein (CHEY-; structural genomics, unknown function; HET: MSE; 1.61A {Methanospirillum hungatei jf-1}
Probab=22.49 E-value=2.3e+02 Score=24.78 Aligned_cols=101 Identities=12% Similarity=0.070 Sum_probs=54.3
Q ss_pred CCCEEEEEecCChhHHHHHHHHHHHHhcCCCeEEEEcCChhhhhhcCCCCccceeeeccCccccccCccEEEEE----cC
Q 002281 689 TPRTVLVLKKPGPALMEEAKEVASFLYHQEKMNILVEPDVHDIFARIPGFGFVQTFYLQDTSDLHERVDFVACL----GG 764 (943)
Q Consensus 689 ~pk~VlIv~K~~~~~~~~a~~l~~~L~~~~g~~V~ve~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~DlVIvL----GG 764 (943)
...+|+||-... .. ...+..+|.. .|++|..-.+..+.+..+. ...+|+||+= +.
T Consensus 6 ~~~~iLivdd~~-~~---~~~l~~~L~~-~g~~v~~~~~~~~a~~~l~----------------~~~~dlii~d~~l~~~ 64 (142)
T 3cg4_A 6 HKGDVMIVDDDA-HV---RIAVKTILSD-AGFHIISADSGGQCIDLLK----------------KGFSGVVLLDIMMPGM 64 (142)
T ss_dssp CCCEEEEECSCH-HH---HHHHHHHHHH-TTCEEEEESSHHHHHHHHH----------------TCCCEEEEEESCCSSS
T ss_pred CCCeEEEEcCCH-HH---HHHHHHHHHH-CCeEEEEeCCHHHHHHHHH----------------hcCCCEEEEeCCCCCC
Confidence 456788885432 22 2334444443 3677765555444332110 1246777752 44
Q ss_pred Cc-hHHHHhhhc-cCCCCcEEEEeC-------------CCCcccC-CCCchhHHHHHHHHHc
Q 002281 765 DG-VILHASNLF-RGAVPPVISFNL-------------GSLGFLT-SHPFEDYRQDLRQVIY 810 (943)
Q Consensus 765 DG-TiL~Aar~~-~~~~~PVLGIN~-------------GsLGFLt-~~~~ed~~~~L~~ll~ 810 (943)
|| .+++..+.. ....+||+-+.. |-.+||. +++.+++...++.+++
T Consensus 65 ~g~~~~~~l~~~~~~~~~pii~~s~~~~~~~~~~~~~~g~~~~l~kp~~~~~l~~~i~~~~~ 126 (142)
T 3cg4_A 65 DGWDTIRAILDNSLEQGIAIVMLTAKNAPDAKMIGLQEYVVDYITKPFDNEDLIEKTTFFMG 126 (142)
T ss_dssp CHHHHHHHHHHTTCCTTEEEEEEECTTCCCCSSTTGGGGEEEEEESSCCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhhcccCCCCEEEEECCCCHHHHHHHHhcCccEEEeCCCCHHHHHHHHHHHHH
Confidence 66 244554441 234578887643 3345555 4677888888887764
No 250
>3eqz_A Response regulator; structural genomics, unknown function, PSI-2, protein struct initiative; 2.15A {Colwellia psychrerythraea} SCOP: c.23.1.0
Probab=22.40 E-value=3.5e+02 Score=23.18 Aligned_cols=56 Identities=13% Similarity=0.023 Sum_probs=34.8
Q ss_pred ccEEEEE----cCCc-hHHHHhhhccCCCCcEEEEeC------------------CCCcccC-CCCchhHHHHHHHHHcC
Q 002281 756 VDFVACL----GGDG-VILHASNLFRGAVPPVISFNL------------------GSLGFLT-SHPFEDYRQDLRQVIYG 811 (943)
Q Consensus 756 ~DlVIvL----GGDG-TiL~Aar~~~~~~~PVLGIN~------------------GsLGFLt-~~~~ed~~~~L~~ll~G 811 (943)
+|+||+= +.|| .+++..+.. ...+||+-+.. |-.+||. +++.+++...|+++..+
T Consensus 47 ~dlvi~D~~l~~~~g~~~~~~l~~~-~~~~~ii~~s~~~~~~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~l~~~~~~ 125 (135)
T 3eqz_A 47 QDIIILDLMMPDMDGIEVIRHLAEH-KSPASLILISGYDSGVLHSAETLALSCGLNVINTFTKPINTEVLTCFLTSLSNR 125 (135)
T ss_dssp TEEEEEECCTTTTHHHHHHHHHHHT-TCCCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEEESSCCHHHHHHHHHHHSCC
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHhC-CCCCCEEEEEeccchhHHHHHHHHHHcCCCcceeeCCCCCHHHHHHHHHHHHhh
Confidence 6888762 4555 234444432 24568876542 2225565 57888999999988877
Q ss_pred C
Q 002281 812 N 812 (943)
Q Consensus 812 ~ 812 (943)
.
T Consensus 126 ~ 126 (135)
T 3eqz_A 126 Q 126 (135)
T ss_dssp C
T ss_pred c
Confidence 6
No 251
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=22.20 E-value=65 Score=34.77 Aligned_cols=56 Identities=23% Similarity=0.259 Sum_probs=42.2
Q ss_pred ccccccCccEEEEEcCCchHHHHhhhccCCCCcEEEEeCC-------------CCcccCC---CCchhHHHHHHHH
Q 002281 749 TSDLHERVDFVACLGGDGVILHASNLFRGAVPPVISFNLG-------------SLGFLTS---HPFEDYRQDLRQV 808 (943)
Q Consensus 749 ~~~l~~~~DlVIvLGGDGTiL~Aar~~~~~~~PVLGIN~G-------------sLGFLt~---~~~ed~~~~L~~l 808 (943)
..++...+|++|+-||=||++.++.. ++|++.+..+ ..|...+ .+.+++.++++++
T Consensus 296 ~~~ll~~~d~~v~~~G~~t~~Ea~~~----G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~l 367 (416)
T 1rrv_A 296 FQALFRRVAAVIHHGSAGTEHVATRA----GVPQLVIPRNTDQPYFAGRVAALGIGVAHDGPTPTFESLSAALTTV 367 (416)
T ss_dssp HHHHGGGSSEEEECCCHHHHHHHHHH----TCCEEECCCSBTHHHHHHHHHHHTSEEECSSSCCCHHHHHHHHHHH
T ss_pred hHHHhccCCEEEecCChhHHHHHHHc----CCCEEEccCCCCcHHHHHHHHHCCCccCCCCCCCCHHHHHHHHHHh
Confidence 34566889999999999999998875 5799987542 3455443 4667788888887
No 252
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=22.04 E-value=68 Score=34.48 Aligned_cols=57 Identities=11% Similarity=0.102 Sum_probs=43.5
Q ss_pred ccccCccEEEEEcCCchHHHHhhhccCCCCcEEEEeC-------------CCCcccCCC---CchhHHHHHHHHHcC
Q 002281 751 DLHERVDFVACLGGDGVILHASNLFRGAVPPVISFNL-------------GSLGFLTSH---PFEDYRQDLRQVIYG 811 (943)
Q Consensus 751 ~l~~~~DlVIvLGGDGTiL~Aar~~~~~~~PVLGIN~-------------GsLGFLt~~---~~ed~~~~L~~ll~G 811 (943)
++...+|++|+-||=+|++.|+.. ++|++.+.. +..|++.+. +.+++.+++.++++.
T Consensus 295 ~~l~~ad~~v~~~G~~t~~Ea~~~----G~P~i~~p~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~i~~ll~~ 367 (430)
T 2iyf_A 295 AILRQADLFVTHAGAGGSQEGLAT----ATPMIAVPQAVDQFGNADMLQGLGVARKLATEEATADLLRETALALVDD 367 (430)
T ss_dssp HHHTTCSEEEECCCHHHHHHHHHT----TCCEEECCCSHHHHHHHHHHHHTTSEEECCCC-CCHHHHHHHHHHHHHC
T ss_pred HHhhccCEEEECCCccHHHHHHHh----CCCEEECCCccchHHHHHHHHHcCCEEEcCCCCCCHHHHHHHHHHHHcC
Confidence 456789999999998899988754 579998754 246777653 567888899888864
No 253
>1mb3_A Cell division response regulator DIVK; signal transduction protein, structural proteomics in europe, spine, structural genomics; 1.41A {Caulobacter vibrioides} SCOP: c.23.1.1 PDB: 1m5u_A 1mav_A 1mb0_A 1m5t_A
Probab=21.94 E-value=3.6e+02 Score=22.75 Aligned_cols=58 Identities=10% Similarity=0.158 Sum_probs=36.1
Q ss_pred CccEEEEE----cCCch-HHHHhhhcc-CCCCcEEEEe-------------CCCCcccC-CCCchhHHHHHHHHHcCC
Q 002281 755 RVDFVACL----GGDGV-ILHASNLFR-GAVPPVISFN-------------LGSLGFLT-SHPFEDYRQDLRQVIYGN 812 (943)
Q Consensus 755 ~~DlVIvL----GGDGT-iL~Aar~~~-~~~~PVLGIN-------------~GsLGFLt-~~~~ed~~~~L~~ll~G~ 812 (943)
.+|+||+= |.||. +++..+... ...+||+-+. .|-.+||. +++.+++...+++++.+.
T Consensus 45 ~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~i~~~~~~~ 122 (124)
T 1mb3_A 45 KPDLILMDIQLPEISGLEVTKWLKEDDDLAHIPVVAVTAFAMKGDEERIREGGCEAYISKPISVVHFLETIKRLLERQ 122 (124)
T ss_dssp CCSEEEEESBCSSSBHHHHHHHHHHSTTTTTSCEEEEC------CHHHHHHHTCSEEECSSCCHHHHHHHHHHHHSCC
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHcCccccCCcEEEEECCCCHHHHHHHHhCCCCEEEeCCCCHHHHHHHHHHHHhcC
Confidence 46777752 45663 445444422 2357887663 25667776 577888888888877653
No 254
>3cfy_A Putative LUXO repressor protein; structural genomics, unknown function, uncharacterized protein, signal receiver domain; 2.50A {Vibrio parahaemolyticus rimd 2210633}
Probab=21.76 E-value=4.1e+02 Score=23.37 Aligned_cols=99 Identities=17% Similarity=0.179 Sum_probs=54.6
Q ss_pred CEEEEEecCChhHHHHHHHHHHHHhcCCCeEEEEcCChhhhhhcCCCCccceeeeccCccccccCccEEEE---E-cCCc
Q 002281 691 RTVLVLKKPGPALMEEAKEVASFLYHQEKMNILVEPDVHDIFARIPGFGFVQTFYLQDTSDLHERVDFVAC---L-GGDG 766 (943)
Q Consensus 691 k~VlIv~K~~~~~~~~a~~l~~~L~~~~g~~V~ve~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~DlVIv---L-GGDG 766 (943)
.+|+||-.... . ...+..+|. ..|++|..-.+..+.+..+ . ...+|+||+ + |.||
T Consensus 5 ~~ILivdd~~~-~---~~~l~~~L~-~~g~~v~~~~~~~~a~~~l--------------~--~~~~dlvllD~~l~~~~g 63 (137)
T 3cfy_A 5 PRVLLVEDSTS-L---AILYKQYVK-DEPYDIFHVETGRDAIQFI--------------E--RSKPQLIILDLKLPDMSG 63 (137)
T ss_dssp CEEEEECSCTT-H---HHHHHHHTT-TSSSEEEEESSHHHHHHHH--------------H--HHCCSEEEECSBCSSSBH
T ss_pred ceEEEEeCCHH-H---HHHHHHHHH-hcCceEEEeCCHHHHHHHH--------------H--hcCCCEEEEecCCCCCCH
Confidence 37888765432 2 233444554 3577776544433322110 0 124677775 2 5577
Q ss_pred h-HHHHhhhccCCCCcEEEEe-------------CCCCcccC-CCCchhHHHHHHHHHcC
Q 002281 767 V-ILHASNLFRGAVPPVISFN-------------LGSLGFLT-SHPFEDYRQDLRQVIYG 811 (943)
Q Consensus 767 T-iL~Aar~~~~~~~PVLGIN-------------~GsLGFLt-~~~~ed~~~~L~~ll~G 811 (943)
. +++..+.. ...+||+-+. .|-.|||. +++.+++...+++++.+
T Consensus 64 ~~l~~~l~~~-~~~~~ii~ls~~~~~~~~~~~~~~ga~~~l~KP~~~~~L~~~i~~~~~~ 122 (137)
T 3cfy_A 64 EDVLDWINQN-DIPTSVIIATAHGSVDLAVNLIQKGAEDFLEKPINADRLKTSVALHLKR 122 (137)
T ss_dssp HHHHHHHHHT-TCCCEEEEEESSCCHHHHHHHHHTTCSEEEESSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhc-CCCCCEEEEEecCcHHHHHHHHHCCccEEEeCCCCHHHHHHHHHHHHHH
Confidence 3 44544443 2456777653 26677776 57788888888877654
No 255
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=21.63 E-value=1.3e+02 Score=27.52 Aligned_cols=97 Identities=11% Similarity=0.169 Sum_probs=56.6
Q ss_pred hcccccCCCEEEEEecCChhHHH-HHHHHHHHHhcCCCeEEEEcCChhhhhhcCCCCccceeeeccCccccccCccEEEE
Q 002281 683 MLMWKTTPRTVLVLKKPGPALME-EAKEVASFLYHQEKMNILVEPDVHDIFARIPGFGFVQTFYLQDTSDLHERVDFVAC 761 (943)
Q Consensus 683 ~l~w~~~pk~VlIv~K~~~~~~~-~a~~l~~~L~~~~g~~V~ve~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~DlVIv 761 (943)
+|.-..+.++|++++-.+-.... .+.++-+.+.+ .|+++-++..-. .. .....+++|+||+
T Consensus 14 ~~~~~~~~kkIlvvC~sG~gTS~ll~~kl~~~~~~-~gi~~~V~~~~~------~~-----------~~~~~~~~DlIis 75 (113)
T 1tvm_A 14 NLYFQGSKRKIIVACGGAVATSTMAAEEIKELCQS-HNIPVELIQCRV------NE-----------IETYMDGVHLICT 75 (113)
T ss_dssp CCCCSCSSEEEEEESCSCSSHHHHHHHHHHHHHHH-TTCCEEEEEECT------TT-----------TTTSTTSCSEEEE
T ss_pred hHhhcccccEEEEECCCCHHHHHHHHHHHHHHHHH-cCCeEEEEEecH------HH-----------HhhccCCCCEEEE
Confidence 34445567899999999976555 35677777754 466654433110 00 0111246898776
Q ss_pred EcCCchHHHHhhhccCC-CCcEEEEeCCCCcccCCCCchhHHHHHHHHHc
Q 002281 762 LGGDGVILHASNLFRGA-VPPVISFNLGSLGFLTSHPFEDYRQDLRQVIY 810 (943)
Q Consensus 762 LGGDGTiL~Aar~~~~~-~~PVLGIN~GsLGFLt~~~~ed~~~~L~~ll~ 810 (943)
-- + |. ... .+|++-+ ..|++..+.+.+.+.+.+++.
T Consensus 76 t~-~---l~-----~~~~~ipvi~v----~~~l~~~d~~~i~~~i~~~l~ 112 (113)
T 1tvm_A 76 TA-R---VD-----RSFGDIPLVHG----MPFVSGVGIEALQNKILTILQ 112 (113)
T ss_dssp SS-C---CC-----CCSTTCCEECC----HHHHHSSSHHHHHHHHHHHHH
T ss_pred CC-c---cc-----cccCCCCEEEE----eeccccCCHHHHHHHHHHHHh
Confidence 22 1 10 122 5688643 268888888887777776653
No 256
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=21.24 E-value=3.9e+02 Score=22.84 Aligned_cols=57 Identities=14% Similarity=0.117 Sum_probs=37.2
Q ss_pred CccEEEEE----cCCch-HHHHhhhccCCCCcEEEEe-------------CCCCcccC-CCCchhHHHHHHHHHcCC
Q 002281 755 RVDFVACL----GGDGV-ILHASNLFRGAVPPVISFN-------------LGSLGFLT-SHPFEDYRQDLRQVIYGN 812 (943)
Q Consensus 755 ~~DlVIvL----GGDGT-iL~Aar~~~~~~~PVLGIN-------------~GsLGFLt-~~~~ed~~~~L~~ll~G~ 812 (943)
.+|+||+= |.||. +++..+.. ...+||+-+. .|-.|||. +++.+++...+++++.+.
T Consensus 47 ~~dlvi~D~~l~~~~g~~~~~~l~~~-~~~~~ii~~s~~~~~~~~~~~~~~ga~~~l~Kp~~~~~l~~~i~~~~~~~ 122 (126)
T 1dbw_A 47 RNGVLVTDLRMPDMSGVELLRNLGDL-KINIPSIVITGHGDVPMAVEAMKAGAVDFIEKPFEDTVIIEAIERASEHL 122 (126)
T ss_dssp CSEEEEEECCSTTSCHHHHHHHHHHT-TCCCCEEEEECTTCHHHHHHHHHTTCSEEEESSCCHHHHHHHHHHHHTTC
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHhc-CCCCCEEEEECCCCHHHHHHHHHhCHHHheeCCCCHHHHHHHHHHHHHhh
Confidence 46777752 56774 45555443 2457887663 26678876 477888888888887653
No 257
>3er6_A Putative transcriptional regulator protein; structural genomics, unknown function, DNA-binding, transcription regulation, PSI-2; 1.90A {Vibrio parahaemolyticus}
Probab=20.99 E-value=2.1e+02 Score=28.49 Aligned_cols=105 Identities=9% Similarity=0.046 Sum_probs=53.3
Q ss_pred ccCCCEEEEEecCChhHHHH--HHHHHHH---HhcCCCeEEEEcCChhhhhhcCCCCccceeeeccCccccccCccEEEE
Q 002281 687 KTTPRTVLVLKKPGPALMEE--AKEVASF---LYHQEKMNILVEPDVHDIFARIPGFGFVQTFYLQDTSDLHERVDFVAC 761 (943)
Q Consensus 687 ~~~pk~VlIv~K~~~~~~~~--a~~l~~~---L~~~~g~~V~ve~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~DlVIv 761 (943)
..++++|+|+.-++-+..+. ..++.+. +...++++|.+-......+....+ +........++. ..+|+||+
T Consensus 5 ~~~~~~v~ill~~g~~~~e~~~~~d~l~~a~~~~~~~~~~v~~vs~~~~~v~~~~G---~~v~~d~~~~~~-~~~D~liv 80 (209)
T 3er6_A 5 NKKNLRVVALAPTGRYFASIISSLEILETAAEFAEFQGFMTHVVTPNNRPLIGRGG---ISVQPTAQWQSF-DFTNILII 80 (209)
T ss_dssp --CCEEEEEECCCTTSCHHHHHHHHHHHHHHHHTTCSCEEEEEECTTSSCEEETTT---EEEECSSCGGGC-SCCSEEEE
T ss_pred CCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHhhcCCCCcEEEEEeCCCCceecCCC---eEEeCCcCcccc-CCCCEEEE
Confidence 34578999998877443332 2333332 222345666542221111111111 111111112232 57899999
Q ss_pred EcCCch----------HHHHhhhccCCCCcEEEEeCC-----CCcccCC
Q 002281 762 LGGDGV----------ILHASNLFRGAVPPVISFNLG-----SLGFLTS 795 (943)
Q Consensus 762 LGGDGT----------iL~Aar~~~~~~~PVLGIN~G-----sLGFLt~ 795 (943)
-||.|. ++...+.+.....+|.+|-.| ..|.|..
T Consensus 81 pGg~~~~~~~~~~~~~l~~~l~~~~~~g~~iaaIC~G~~~La~aGLL~g 129 (209)
T 3er6_A 81 GSIGDPLESLDKIDPALFDWIRELHLKGSKIVAIDTGIFVVAKAGLLQQ 129 (209)
T ss_dssp CCCSCHHHHGGGSCHHHHHHHHHHHHTTCEEEEETTHHHHHHHHTCCSS
T ss_pred CCCCCchhhhccCCHHHHHHHHHHHhcCCEEEEEcHHHHHHHHcCCCCC
Confidence 999764 344455555677899999886 3455544
No 258
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=20.45 E-value=76 Score=34.17 Aligned_cols=57 Identities=18% Similarity=0.181 Sum_probs=42.8
Q ss_pred ccccCccEEEEEcCCchHHHHhhhccCCCCcEEEEeCC-------------CCcccCC---CCchhHHHHHHHHHcC
Q 002281 751 DLHERVDFVACLGGDGVILHASNLFRGAVPPVISFNLG-------------SLGFLTS---HPFEDYRQDLRQVIYG 811 (943)
Q Consensus 751 ~l~~~~DlVIvLGGDGTiL~Aar~~~~~~~PVLGIN~G-------------sLGFLt~---~~~ed~~~~L~~ll~G 811 (943)
++...+|++|+-||=||++.++.. ++|++.+... ..|...+ .+.+++.++++++++.
T Consensus 317 ~~l~~~d~~v~~~G~~t~~Ea~~~----G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~~ 389 (424)
T 2iya_A 317 DILTKASAFITHAGMGSTMEALSN----AVPMVAVPQIAEQTMNAERIVELGLGRHIPRDQVTAEKLREAVLAVASD 389 (424)
T ss_dssp HHHTTCSEEEECCCHHHHHHHHHT----TCCEEECCCSHHHHHHHHHHHHTTSEEECCGGGCCHHHHHHHHHHHHHC
T ss_pred HHHhhCCEEEECCchhHHHHHHHc----CCCEEEecCccchHHHHHHHHHCCCEEEcCcCCCCHHHHHHHHHHHHcC
Confidence 566789999999999999998764 5799888542 3455543 3667888888888754
No 259
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=20.39 E-value=69 Score=34.69 Aligned_cols=57 Identities=19% Similarity=0.237 Sum_probs=42.1
Q ss_pred cccccCccEEEEEcCCchHHHHhhhccCCCCcEEEEeCC-------------CCcccCC---CCchhHHHHHHHHHc
Q 002281 750 SDLHERVDFVACLGGDGVILHASNLFRGAVPPVISFNLG-------------SLGFLTS---HPFEDYRQDLRQVIY 810 (943)
Q Consensus 750 ~~l~~~~DlVIvLGGDGTiL~Aar~~~~~~~PVLGIN~G-------------sLGFLt~---~~~ed~~~~L~~ll~ 810 (943)
.++...+|++|+=||=||+..+... ++|++.+-.+ ..|.... .+.+++.+++.++++
T Consensus 279 ~~ll~~~d~~v~~gG~~t~~Eal~~----GvP~v~~p~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~ 351 (404)
T 3h4t_A 279 QVLFGRVAAVVHHGGAGTTTAVTRA----GAPQVVVPQKADQPYYAGRVADLGVGVAHDGPTPTVESLSAALATALT 351 (404)
T ss_dssp HHHGGGSSEEEECCCHHHHHHHHHH----TCCEEECCCSTTHHHHHHHHHHHTSEEECSSSSCCHHHHHHHHHHHTS
T ss_pred HHHHhhCcEEEECCcHHHHHHHHHc----CCCEEEcCCcccHHHHHHHHHHCCCEeccCcCCCCHHHHHHHHHHHhC
Confidence 4566789999999999999988765 5799887432 2454432 366778888888875
No 260
>2qzj_A Two-component response regulator; 11017X, PSI-II, structural genomics; 2.89A {Clostridium difficile}
Probab=20.31 E-value=3.5e+02 Score=23.81 Aligned_cols=55 Identities=16% Similarity=0.302 Sum_probs=34.5
Q ss_pred CccEEEE---E-cCCch-HHHHhhhccCCCCcEEEEe-------------CCCCcccC-CCCchhHHHHHHHHHcC
Q 002281 755 RVDFVAC---L-GGDGV-ILHASNLFRGAVPPVISFN-------------LGSLGFLT-SHPFEDYRQDLRQVIYG 811 (943)
Q Consensus 755 ~~DlVIv---L-GGDGT-iL~Aar~~~~~~~PVLGIN-------------~GsLGFLt-~~~~ed~~~~L~~ll~G 811 (943)
.+|+||+ + |.||. +++..+... .+||+-+. .|-.|||. +++++++...+++++.+
T Consensus 48 ~~dlvllD~~l~~~~g~~l~~~l~~~~--~~~ii~ls~~~~~~~~~~~~~~ga~~~l~KP~~~~~L~~~l~~~~~~ 121 (136)
T 2qzj_A 48 KYDLIFLEIILSDGDGWTLCKKIRNVT--TCPIVYMTYINEDQSILNALNSGGDDYLIKPLNLEILYAKVKAILRR 121 (136)
T ss_dssp CCSEEEEESEETTEEHHHHHHHHHTTC--CCCEEEEESCCCHHHHHHHHHTTCCEEEESSCCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHccCC--CCCEEEEEcCCCHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHHHHH
Confidence 4677775 2 44662 344444322 57887663 26678876 57888888888877654
No 261
>1erc_A Pheromone ER-1; NMR {Euplotes raikovi} SCOP: a.10.1.1 PDB: 2erl_A*
Probab=20.16 E-value=47 Score=25.71 Aligned_cols=17 Identities=24% Similarity=0.122 Sum_probs=14.5
Q ss_pred eCccCCchHHHHHHHHH
Q 002281 353 HSKEGVWRTYAMVSRWR 369 (943)
Q Consensus 353 HC~AGKDRTGALvaLlr 369 (943)
.|+.|.||||.+.++|-
T Consensus 18 ~Ct~gEDr~GC~~~i~~ 34 (40)
T 1erc_A 18 LCTEGEDRTGCYMYIYS 34 (40)
T ss_dssp HSCSSSHHHHHHHHHHH
T ss_pred ccCCCCCCCCeEEEEec
Confidence 49999999998877774
No 262
>3iv7_A Alcohol dehydrogenase IV; NP_602249.1, iron-containing alcohol dehydrogenase, structur genomics, joint center for structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=20.01 E-value=48 Score=36.56 Aligned_cols=33 Identities=18% Similarity=0.574 Sum_probs=27.6
Q ss_pred cCccEEEEEcCCchHHHHhhhcc-CCCCcEEEEeC
Q 002281 754 ERVDFVACLGGDGVILHASNLFR-GAVPPVISFNL 787 (943)
Q Consensus 754 ~~~DlVIvLGGDGTiL~Aar~~~-~~~~PVLGIN~ 787 (943)
.++|+||.||| |+++-+++... ...+|++.|-+
T Consensus 87 ~~~D~IIavGG-Gs~iD~aK~iA~~~~~P~i~IPT 120 (364)
T 3iv7_A 87 NEIDLLVCVGG-GSTIGLAKAIAMTTALPIVAIPT 120 (364)
T ss_dssp TTCCEEEEEES-HHHHHHHHHHHHHHCCCEEEEEC
T ss_pred cCCCEEEEeCC-cHHHHHHHHHHhccCCCEEEEcC
Confidence 47899999999 99999998764 24689998876
Done!