Query 002284
Match_columns 943
No_of_seqs 712 out of 4524
Neff 10.5
Searched_HMMs 46136
Date Thu Mar 28 20:38:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002284.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/002284hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 1.2E-45 2.5E-50 457.3 27.5 552 11-787 51-607 (968)
2 PLN00113 leucine-rich repeat r 100.0 8E-43 1.7E-47 431.9 27.5 534 59-812 69-608 (968)
3 KOG0472 Leucine-rich repeat pr 100.0 2.2E-32 4.7E-37 269.7 -10.4 267 87-552 43-309 (565)
4 KOG0472 Leucine-rich repeat pr 100.0 2.4E-32 5.2E-37 269.4 -15.1 468 54-602 63-541 (565)
5 KOG4194 Membrane glycoprotein 100.0 4.2E-29 9.1E-34 257.8 5.8 362 89-570 78-446 (873)
6 PLN03210 Resistant to P. syrin 100.0 9.9E-27 2.1E-31 287.1 27.3 186 1-188 490-686 (1153)
7 KOG4194 Membrane glycoprotein 99.9 3E-28 6.6E-33 251.5 6.5 391 32-550 50-449 (873)
8 KOG0618 Serine/threonine phosp 99.9 5.6E-29 1.2E-33 271.3 -5.5 130 678-811 359-489 (1081)
9 KOG0618 Serine/threonine phosp 99.9 8E-28 1.7E-32 262.4 -1.6 456 82-599 37-510 (1081)
10 PLN03210 Resistant to P. syrin 99.9 2.4E-24 5.2E-29 266.0 24.0 343 512-895 554-911 (1153)
11 KOG0444 Cytoskeletal regulator 99.9 7.5E-27 1.6E-31 242.6 -5.5 252 273-607 127-380 (1255)
12 KOG0444 Cytoskeletal regulator 99.9 2.7E-25 5.9E-30 231.1 -2.7 367 35-557 8-379 (1255)
13 KOG4658 Apoptotic ATPase [Sign 99.8 2.5E-21 5.4E-26 225.6 11.9 300 1-324 483-798 (889)
14 KOG4237 Extracellular matrix p 99.8 2E-20 4.4E-25 185.5 -4.9 110 78-188 79-193 (498)
15 KOG4237 Extracellular matrix p 99.7 7.3E-19 1.6E-23 174.5 -2.0 89 512-603 270-360 (498)
16 PRK15387 E3 ubiquitin-protein 99.6 2.1E-15 4.5E-20 172.3 14.4 79 89-177 201-279 (788)
17 PRK15387 E3 ubiquitin-protein 99.6 2.5E-15 5.5E-20 171.6 13.5 97 678-787 362-458 (788)
18 KOG0617 Ras suppressor protein 99.6 1.9E-17 4.2E-22 144.9 -5.3 109 79-188 46-155 (264)
19 KOG0617 Ras suppressor protein 99.5 1.1E-16 2.4E-21 140.2 -5.4 106 82-188 26-132 (264)
20 PRK15370 E3 ubiquitin-protein 99.5 2E-14 4.4E-19 165.6 10.6 82 89-178 178-259 (754)
21 PRK15370 E3 ubiquitin-protein 99.5 3.9E-14 8.4E-19 163.3 11.5 97 80-188 192-288 (754)
22 KOG4658 Apoptotic ATPase [Sign 99.4 6.8E-13 1.5E-17 155.5 8.9 132 54-194 518-653 (889)
23 cd00116 LRR_RI Leucine-rich re 99.2 1.7E-12 3.6E-17 140.0 0.5 40 512-551 19-62 (319)
24 cd00116 LRR_RI Leucine-rich re 99.2 4.7E-12 1E-16 136.5 0.2 89 82-170 44-148 (319)
25 KOG4341 F-box protein containi 99.0 1.5E-11 3.2E-16 124.4 -4.8 290 563-894 138-443 (483)
26 KOG4341 F-box protein containi 99.0 1.7E-11 3.6E-16 124.0 -4.6 178 680-862 270-460 (483)
27 PF14580 LRR_9: Leucine-rich r 98.9 1.6E-09 3.5E-14 101.3 4.8 131 54-194 14-151 (175)
28 KOG0532 Leucine-rich repeat (L 98.8 3.2E-10 6.9E-15 119.2 -3.5 99 87-188 73-171 (722)
29 COG4886 Leucine-rich repeat (L 98.8 5.1E-09 1.1E-13 116.1 5.7 103 84-188 111-214 (394)
30 KOG3207 Beta-tubulin folding c 98.8 1.6E-09 3.5E-14 110.5 0.6 131 486-619 195-333 (505)
31 PF14580 LRR_9: Leucine-rich r 98.7 8.8E-09 1.9E-13 96.4 4.4 81 87-170 17-99 (175)
32 KOG0532 Leucine-rich repeat (L 98.7 6.1E-10 1.3E-14 117.1 -4.4 109 78-189 87-195 (722)
33 PF13855 LRR_8: Leucine rich r 98.7 1.7E-08 3.6E-13 77.3 4.3 58 89-146 1-60 (61)
34 KOG1259 Nischarin, modulator o 98.6 5.8E-09 1.2E-13 100.8 0.4 81 88-170 283-363 (490)
35 KOG3207 Beta-tubulin folding c 98.6 1.3E-08 2.7E-13 104.2 2.3 216 109-393 118-339 (505)
36 PRK15386 type III secretion pr 98.6 1.6E-07 3.5E-12 98.7 10.5 21 675-695 69-89 (426)
37 PRK15386 type III secretion pr 98.6 2.6E-07 5.7E-12 97.1 11.7 61 852-915 154-215 (426)
38 PLN03150 hypothetical protein; 98.6 8.6E-08 1.9E-12 111.1 7.8 99 90-188 419-520 (623)
39 PF13855 LRR_8: Leucine rich r 98.5 5.1E-08 1.1E-12 74.6 3.2 59 112-170 1-60 (61)
40 COG4886 Leucine-rich repeat (L 98.5 6.4E-08 1.4E-12 107.4 5.2 123 57-188 114-237 (394)
41 PLN03150 hypothetical protein; 98.5 1.8E-07 4E-12 108.3 6.8 109 680-788 420-529 (623)
42 KOG1259 Nischarin, modulator o 98.4 5.3E-08 1.1E-12 94.3 0.6 122 58-190 283-406 (490)
43 KOG2120 SCF ubiquitin ligase, 98.3 1.9E-08 4.2E-13 97.4 -5.2 157 678-835 185-349 (419)
44 KOG2120 SCF ubiquitin ligase, 98.3 4.1E-08 8.9E-13 95.2 -3.9 89 233-331 256-349 (419)
45 PF12799 LRR_4: Leucine Rich r 98.3 9.2E-07 2E-11 61.4 3.4 40 89-128 1-40 (44)
46 KOG0531 Protein phosphatase 1, 98.2 2.3E-07 5E-12 102.8 -0.5 104 81-188 87-191 (414)
47 KOG1909 Ran GTPase-activating 98.2 1.8E-07 4E-12 93.2 -1.6 256 82-388 23-307 (382)
48 KOG0531 Protein phosphatase 1, 98.1 5.4E-07 1.2E-11 99.9 -0.9 100 86-189 69-168 (414)
49 KOG1909 Ran GTPase-activating 98.0 4.4E-07 9.6E-12 90.6 -2.5 108 56-170 27-168 (382)
50 PF12799 LRR_4: Leucine Rich r 98.0 7.2E-06 1.6E-10 57.0 3.2 35 112-146 1-35 (44)
51 KOG4579 Leucine-rich repeat (L 97.9 3.1E-06 6.6E-11 72.6 0.6 92 85-178 49-141 (177)
52 KOG1859 Leucine-rich repeat pr 97.9 4.6E-07 9.9E-12 98.6 -5.4 93 82-177 102-226 (1096)
53 KOG2982 Uncharacterized conser 97.7 1.2E-05 2.7E-10 78.4 1.0 84 87-170 69-157 (418)
54 COG5238 RNA1 Ran GTPase-activa 97.7 3.7E-06 7.9E-11 80.8 -2.8 91 85-176 26-136 (388)
55 KOG4579 Leucine-rich repeat (L 97.7 6.3E-06 1.4E-10 70.8 -1.1 101 87-189 25-129 (177)
56 KOG1859 Leucine-rich repeat pr 97.6 2.4E-06 5.1E-11 93.2 -5.7 80 87-170 185-265 (1096)
57 KOG1947 Leucine rich repeat pr 97.3 4.7E-05 1E-09 87.5 -0.7 38 562-599 187-224 (482)
58 KOG1644 U2-associated snRNP A' 97.2 0.00041 8.9E-09 64.4 4.8 102 440-549 45-149 (233)
59 KOG2982 Uncharacterized conser 97.2 9.5E-05 2.1E-09 72.4 0.5 88 82-170 38-132 (418)
60 KOG3665 ZYG-1-like serine/thre 97.2 0.00034 7.4E-09 81.1 4.9 106 59-170 122-231 (699)
61 KOG1644 U2-associated snRNP A' 97.2 0.00043 9.4E-09 64.2 4.3 104 87-193 40-150 (233)
62 KOG1947 Leucine rich repeat pr 97.2 2.4E-05 5.3E-10 89.9 -4.8 234 678-917 188-444 (482)
63 KOG3665 ZYG-1-like serine/thre 97.0 0.00043 9.3E-09 80.3 3.2 105 87-194 120-231 (699)
64 PF00560 LRR_1: Leucine Rich R 96.6 0.00075 1.6E-08 38.8 0.8 19 114-132 2-20 (22)
65 KOG2123 Uncharacterized conser 96.5 0.00053 1.1E-08 66.7 -0.9 78 87-165 39-123 (388)
66 KOG2123 Uncharacterized conser 96.3 0.00052 1.1E-08 66.8 -1.8 104 87-193 17-127 (388)
67 COG5238 RNA1 Ran GTPase-activa 96.3 0.0029 6.2E-08 61.5 3.0 83 106-189 24-126 (388)
68 PF00560 LRR_1: Leucine Rich R 96.1 0.0036 7.8E-08 35.9 1.6 22 90-111 1-22 (22)
69 KOG2739 Leucine-rich acidic nu 95.9 0.0042 9.2E-08 60.6 2.3 82 87-170 41-127 (260)
70 PF13306 LRR_5: Leucine rich r 95.5 0.035 7.5E-07 50.1 6.7 117 54-185 7-128 (129)
71 KOG0473 Leucine-rich repeat pr 95.5 0.00092 2E-08 63.3 -3.9 86 84-170 37-122 (326)
72 KOG2739 Leucine-rich acidic nu 95.1 0.0086 1.9E-07 58.5 1.3 62 108-170 39-102 (260)
73 PF13504 LRR_7: Leucine rich r 94.9 0.014 3.1E-07 30.9 1.2 16 113-128 2-17 (17)
74 PF13306 LRR_5: Leucine rich r 94.2 0.12 2.7E-06 46.5 6.5 104 483-598 7-112 (129)
75 PF13504 LRR_7: Leucine rich r 93.9 0.04 8.7E-07 29.2 1.5 17 89-105 1-17 (17)
76 KOG3864 Uncharacterized conser 93.8 0.0055 1.2E-07 57.2 -3.2 92 741-833 92-185 (221)
77 KOG0473 Leucine-rich repeat pr 93.7 0.0056 1.2E-07 58.2 -3.3 87 101-189 30-117 (326)
78 KOG3864 Uncharacterized conser 93.4 0.02 4.3E-07 53.7 -0.3 85 798-888 101-187 (221)
79 smart00369 LRR_TYP Leucine-ric 92.4 0.1 2.3E-06 31.3 1.9 20 111-130 1-20 (26)
80 smart00370 LRR Leucine-rich re 92.4 0.1 2.3E-06 31.3 1.9 20 111-130 1-20 (26)
81 smart00370 LRR Leucine-rich re 87.0 0.38 8.3E-06 28.8 1.4 21 88-108 1-21 (26)
82 smart00369 LRR_TYP Leucine-ric 87.0 0.38 8.3E-06 28.8 1.4 21 88-108 1-21 (26)
83 smart00365 LRR_SD22 Leucine-ri 80.1 1.3 2.7E-05 26.6 1.5 17 111-127 1-17 (26)
84 smart00364 LRR_BAC Leucine-ric 78.6 1.2 2.7E-05 26.5 1.1 17 113-129 3-19 (26)
85 smart00367 LRR_CC Leucine-rich 78.1 1.5 3.2E-05 26.3 1.5 16 877-892 2-17 (26)
86 PF13516 LRR_6: Leucine Rich r 74.1 1.8 3.9E-05 25.3 1.1 12 113-124 3-14 (24)
87 smart00368 LRR_RI Leucine rich 57.8 7.2 0.00016 23.8 1.5 14 112-125 2-15 (28)
88 KOG3763 mRNA export factor TAP 38.9 11 0.00023 41.8 0.2 66 296-365 217-285 (585)
89 KOG4308 LRR-containing protein 38.0 1.2 2.5E-05 49.9 -7.5 160 88-249 114-302 (478)
90 PF05725 FNIP: FNIP Repeat; I 33.7 66 0.0014 22.2 3.4 31 590-621 13-43 (44)
91 KOG3763 mRNA export factor TAP 28.5 29 0.00063 38.6 1.4 43 514-556 242-286 (585)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=1.2e-45 Score=457.28 Aligned_cols=552 Identities=17% Similarity=0.216 Sum_probs=296.6
Q ss_pred HhhccceEEEecccccccccccCCceeEEEEEeccCccccccccccccccccEEeecccCCCCCCcchhccchhhh-ccC
Q 002284 11 WAAGEMYFRMEYISEVNKQQSFSRNLHHLSYIRGDYDGVKRFEDLYDIQHLRTLLPVTLLSSRPGYLARSILPRLL-KLQ 89 (943)
Q Consensus 11 ~~~~~e~~~~~~~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~~~~Lr~L~~~~~~~l~~~~~~~~~~~~~~-~l~ 89 (943)
|-+.++||.|.+. .+ ....+++.+.+..+.+.... ...+..+++|++|.+. +|.+.+.+|.+++ .++
T Consensus 51 w~~~~~~c~w~gv----~c-~~~~~v~~L~L~~~~i~~~~-~~~~~~l~~L~~L~Ls------~n~~~~~ip~~~~~~l~ 118 (968)
T PLN00113 51 WNSSADVCLWQGI----TC-NNSSRVVSIDLSGKNISGKI-SSAIFRLPYIQTINLS------NNQLSGPIPDDIFTTSS 118 (968)
T ss_pred CCCCCCCCcCcce----ec-CCCCcEEEEEecCCCccccC-ChHHhCCCCCCEEECC------CCccCCcCChHHhccCC
Confidence 4445567777665 22 22346777777655443222 1345566667766543 3345566666666 677
Q ss_pred cccEEEecCccccc-cCccccCCCCCceeecCCCccc-ccchhhhhccccceeecCCCcccccccHHHhccccCceEEcC
Q 002284 90 RLRVFSLRGYLISE-VPDSIGDLSYLRYLNLSGTQIR-TLPESVNKLYNLHTLLLEGCRELKKKCADMGNLIKLHHLNNS 167 (943)
Q Consensus 90 ~L~~L~L~~n~i~~-lp~~~~~l~~L~~L~Ls~n~i~-~lp~~i~~L~~L~~L~L~~n~~~~~~p~~~~~L~~L~~L~l~ 167 (943)
+||+|+|++|.+.. +|. +.+++|++|+|++|.+. .+|..|+++++|++|++++|...+.+|..|+++++|++|+++
T Consensus 119 ~L~~L~Ls~n~l~~~~p~--~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~ 196 (968)
T PLN00113 119 SLRYLNLSNNNFTGSIPR--GSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLA 196 (968)
T ss_pred CCCEEECcCCccccccCc--cccCCCCEEECcCCcccccCChHHhcCCCCCEEECccCcccccCChhhhhCcCCCeeecc
Confidence 77777777766543 343 44666777777777665 456667777777777777766556666667777777777777
Q ss_pred CCCCCccccccccccccccccCceEeccCCCCCcccccCcccccCceeecccccccCccchhhcccCCCCCCCeEEEEee
Q 002284 168 NTDSLEEMPLGIGKLTCLLTLCNFVVGKDSGSGLRELKLLTHLCGTLNISKLENVKYVGDAMEAQLDGKKNLKVLMLEWT 247 (943)
Q Consensus 168 ~n~~~~~~p~~~~~L~~L~~L~~~~~~~~~~~~~~~l~~l~~L~~~l~~~~l~~~~~~~~~~~~~l~~~~~L~~L~l~~n 247 (943)
+|.+.+.+|..++++++|++| ++++|
T Consensus 197 ~n~l~~~~p~~l~~l~~L~~L------------------------------------------------------~L~~n 222 (968)
T PLN00113 197 SNQLVGQIPRELGQMKSLKWI------------------------------------------------------YLGYN 222 (968)
T ss_pred CCCCcCcCChHHcCcCCccEE------------------------------------------------------ECcCC
Confidence 766555555555555554444 33333
Q ss_pred cCCCCCCchhhhhHHhhhccCCCCCCcceEEEEeeCCCCCCcccCCCCcCCeeEEEEeCCCCCCCCC-CCCCCCCCCeeE
Q 002284 248 RSTNGLSSREAQTEKGVLDMLKPHRSLEQFCISGFGGKKFPTWLGYSLFSNLVTLKFQDCSMCTSMP-SVGQLPSLKHLE 326 (943)
Q Consensus 248 ~~~~~~~~~~~~~~~~~l~~l~~~~~L~~L~l~~~~~~~~p~~~~~~~l~~L~~L~L~~n~~~~~~~-~~~~l~~L~~L~ 326 (943)
.++ ..+|..+.. +++|++|++++|.+.+.+| .++.+++|++|+
T Consensus 223 ~l~----------------------------------~~~p~~l~~--l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~ 266 (968)
T PLN00113 223 NLS----------------------------------GEIPYEIGG--LTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLF 266 (968)
T ss_pred ccC----------------------------------CcCChhHhc--CCCCCEEECcCceeccccChhHhCCCCCCEEE
Confidence 321 112222221 4444555555554444444 444455555555
Q ss_pred EecCcCceeeCccccCCCCCCCCCCcceeecccccccccccccccCCccccCCcccEEeeccCCCccCCCCCCCCCccEE
Q 002284 327 VRGMSRVKRLGSEFYGNDSPIPFPCLETLHFAEMQEWEEWIPHGCSQEIEGFPKLRELHIVRCSKLQGTLPTHLTLLDIL 406 (943)
Q Consensus 327 L~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~~~~~~~L~~L~l~~c~~l~~~~p~~l~~L~~L 406 (943)
+++|.....++..+.. +++|++|++++|. +.+..|..+..+++|++|++++ |.+.+.+|..+
T Consensus 267 L~~n~l~~~~p~~l~~------l~~L~~L~Ls~n~-----l~~~~p~~~~~l~~L~~L~l~~-n~~~~~~~~~~------ 328 (968)
T PLN00113 267 LYQNKLSGPIPPSIFS------LQKLISLDLSDNS-----LSGEIPELVIQLQNLEILHLFS-NNFTGKIPVAL------ 328 (968)
T ss_pred CcCCeeeccCchhHhh------ccCcCEEECcCCe-----eccCCChhHcCCCCCcEEECCC-CccCCcCChhH------
Confidence 5544422222211111 2333333333332 0111223334455555555555 34444444321
Q ss_pred EEeccCCCCccceEEeccCCceeeeccCcccchhhhccccccccCCCccccCCCCceeeeeEeecCccccccchhhhhhc
Q 002284 407 VVQNFTSLPALCKLRIDRCKKVVWRSTTDCESQLYKDISNQMFLGGPLKLQLPKLDELDISIIIDGLSYIWQNETQLLQD 486 (943)
Q Consensus 407 ~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~l~~l~ls~n~l~~~~~~~~l~~L~~L~Ls~~~~~~~~~~~~~~~~~~~ 486 (943)
..+++|+.|++++|. +. ...+..+..
T Consensus 329 -----~~l~~L~~L~L~~n~----------------------l~---------------------------~~~p~~l~~ 354 (968)
T PLN00113 329 -----TSLPRLQVLQLWSNK----------------------FS---------------------------GEIPKNLGK 354 (968)
T ss_pred -----hcCCCCCEEECcCCC----------------------Cc---------------------------CcCChHHhC
Confidence 223333333333322 11 111123445
Q ss_pred ccccCeEEeecCCCcccchhhhhhhcCccceeceEEEecCCCcCccchhccCCCCcCeeeccCCCCCcccCCCC-CCCCc
Q 002284 487 IATLKRLKIERCPKLQFLEEEDQWQFGLSFRLEHLELINCQDLEKLPKSLLSLSSLTEMRIHNCSSLVSFPEAV-LPSQL 565 (943)
Q Consensus 487 l~~L~~L~l~~~~~l~~l~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~L~~n~~l~~~~~~~-~~~~L 565 (943)
+++|+.|++++|.....++.. +..+++|+.|++++|.+.+.+|..+..+++|+.|++++|...+.+|... .++.|
T Consensus 355 ~~~L~~L~Ls~n~l~~~~p~~----~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L 430 (968)
T PLN00113 355 HNNLTVLDLSTNNLTGEIPEG----LCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLV 430 (968)
T ss_pred CCCCcEEECCCCeeEeeCChh----HhCcCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEeeeECChhHhcCCCC
Confidence 566677777666533333332 5666777777777777777777777777777777777776555554422 25677
Q ss_pred cEEEEecCCCCCcCccccccCCCCCccEEEeecCCCcccccCcCCCCCCceEEeccCcCccccccccCcccccccCCccc
Q 002284 566 RVISIWDSGALKFLPEAWMLDNNSSLEILDIRHCHLLTYIAGVQLPPSLKQLEIYNCDNLRTLTAEEGIHSSRRHTSLLE 645 (943)
Q Consensus 566 ~~L~l~~~~~l~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~L~~L~l~~~~~L~~l~~~~~~~~~~~~~~~L~ 645 (943)
+.|++++|...+.++..+ ..+++|++|++++|.+.+.+|.....++|+.|++++|.-...++.
T Consensus 431 ~~L~Ls~N~l~~~~~~~~--~~l~~L~~L~L~~n~~~~~~p~~~~~~~L~~L~ls~n~l~~~~~~--------------- 493 (968)
T PLN00113 431 YFLDISNNNLQGRINSRK--WDMPSLQMLSLARNKFFGGLPDSFGSKRLENLDLSRNQFSGAVPR--------------- 493 (968)
T ss_pred CEEECcCCcccCccChhh--ccCCCCcEEECcCceeeeecCcccccccceEEECcCCccCCccCh---------------
Confidence 777777777655555442 256777777777776665555433334455555555432111110
Q ss_pred eeeeecCCCcccccchhhHHHHhhhhhcCCCcccccEEEeecCCCchhhHhhhcccccccEEEeeccCCcccccccccCC
Q 002284 646 CLEIHSCPSLTCLISKNELRAALDYLVVGNLPQALKFLSIWHCSKLESIVERLDNKISLEVIEIVSCENLKMLPHGLHKL 725 (943)
Q Consensus 646 ~L~i~~c~~l~~~~~~~~~~~~~~~~~~~~lp~~L~~L~l~~~~~l~~~~~~~~~l~~L~~L~l~~~~~~~~~p~~~~~l 725 (943)
....+ ++|+.|++++|...+.+|..+.++++|++|++++|.+.+.+|..+..+
T Consensus 494 --------------------------~~~~l-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 546 (968)
T PLN00113 494 --------------------------KLGSL-SELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEM 546 (968)
T ss_pred --------------------------hhhhh-hccCEEECcCCcceeeCChHHcCccCCCEEECCCCcccccCChhHhCc
Confidence 00111 345666666665555566666666666666666666666666666666
Q ss_pred CCccEEeccCCCCCcccCcCCccccccceeeeccccCCccCCCcCCCCCCCCceeecCCCCC
Q 002284 726 WHLQEIDIQDCENLVSFPEGGLLSAKLKRLVIYGCKKLEALPEGMHNLSSLQYLTIGGVPSL 787 (943)
Q Consensus 726 ~~L~~L~l~~~~~l~~~p~~~~~l~~L~~L~l~~~~~l~~~p~~~~~l~~L~~L~l~~~~~l 787 (943)
++|++|++++|...+.+|..+..+++|+.|++++|+..+.+|.. +.+..+....+.+|+.+
T Consensus 547 ~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p~~-~~~~~~~~~~~~~n~~l 607 (968)
T PLN00113 547 PVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLPST-GAFLAINASAVAGNIDL 607 (968)
T ss_pred ccCCEEECCCCcccccCChhHhcCcccCEEeccCCcceeeCCCc-chhcccChhhhcCCccc
Confidence 66666666666555566665555666666666666666656542 33334444444555433
No 2
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=8e-43 Score=431.95 Aligned_cols=534 Identities=19% Similarity=0.200 Sum_probs=384.2
Q ss_pred ccccEEeecccCCCCCCcchhccchhhhccCcccEEEecCcccc-ccCccc-cCCCCCceeecCCCcccc-cchhhhhcc
Q 002284 59 QHLRTLLPVTLLSSRPGYLARSILPRLLKLQRLRVFSLRGYLIS-EVPDSI-GDLSYLRYLNLSGTQIRT-LPESVNKLY 135 (943)
Q Consensus 59 ~~Lr~L~~~~~~~l~~~~~~~~~~~~~~~l~~L~~L~L~~n~i~-~lp~~~-~~l~~L~~L~Ls~n~i~~-lp~~i~~L~ 135 (943)
.+++.|.+.+ |.+.+.+++.+..+++|++|+|++|.+. .+|..+ ..+++||+|+|++|++.. +|. +.++
T Consensus 69 ~~v~~L~L~~------~~i~~~~~~~~~~l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~--~~l~ 140 (968)
T PLN00113 69 SRVVSIDLSG------KNISGKISSAIFRLPYIQTINLSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPR--GSIP 140 (968)
T ss_pred CcEEEEEecC------CCccccCChHHhCCCCCCEEECCCCccCCcCChHHhccCCCCCEEECcCCccccccCc--cccC
Confidence 4566665533 3456666666668888888888888765 567655 478888888888887763 453 4577
Q ss_pred ccceeecCCCcccccccHHHhccccCceEEcCCCCCCccccccccccccccccCceEeccCCCCCcccccCcccccCcee
Q 002284 136 NLHTLLLEGCRELKKKCADMGNLIKLHHLNNSNTDSLEEMPLGIGKLTCLLTLCNFVVGKDSGSGLRELKLLTHLCGTLN 215 (943)
Q Consensus 136 ~L~~L~L~~n~~~~~~p~~~~~L~~L~~L~l~~n~~~~~~p~~~~~L~~L~~L~~~~~~~~~~~~~~~l~~l~~L~~~l~ 215 (943)
+|++|++++|...+.+|..|+++++|++|++++|.+.+.+|..++++++|+
T Consensus 141 ~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~----------------------------- 191 (968)
T PLN00113 141 NLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLE----------------------------- 191 (968)
T ss_pred CCCEEECcCCcccccCChHHhcCCCCCEEECccCcccccCChhhhhCcCCC-----------------------------
Confidence 888888888876667777788888888888888775556665555444444
Q ss_pred ecccccccCccchhhcccCCCCCCCeEEEEeecCCCCCCchhhhhHHhhhccCCCCCCcceEEEEeeCCCCCCcccCCCC
Q 002284 216 ISKLENVKYVGDAMEAQLDGKKNLKVLMLEWTRSTNGLSSREAQTEKGVLDMLKPHRSLEQFCISGFGGKKFPTWLGYSL 295 (943)
Q Consensus 216 ~~~l~~~~~~~~~~~~~l~~~~~L~~L~l~~n~~~~~~~~~~~~~~~~~l~~l~~~~~L~~L~l~~~~~~~~p~~~~~~~ 295 (943)
+|++++|.++ ..+|..+..
T Consensus 192 -------------------------~L~L~~n~l~----------------------------------~~~p~~l~~-- 210 (968)
T PLN00113 192 -------------------------FLTLASNQLV----------------------------------GQIPRELGQ-- 210 (968)
T ss_pred -------------------------eeeccCCCCc----------------------------------CcCChHHcC--
Confidence 3444433331 133444433
Q ss_pred cCCeeEEEEeCCCCCCCCC-CCCCCCCCCeeEEecCcCceeeCccccCCCCCCCCCCcceeecccccccccccccccCCc
Q 002284 296 FSNLVTLKFQDCSMCTSMP-SVGQLPSLKHLEVRGMSRVKRLGSEFYGNDSPIPFPCLETLHFAEMQEWEEWIPHGCSQE 374 (943)
Q Consensus 296 l~~L~~L~L~~n~~~~~~~-~~~~l~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~ 374 (943)
+++|++|++++|.+.+.+| .++.+++|++|++++|.....++..+.. +++|++|++++|.. .+..|..
T Consensus 211 l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~------l~~L~~L~L~~n~l-----~~~~p~~ 279 (968)
T PLN00113 211 MKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGN------LKNLQYLFLYQNKL-----SGPIPPS 279 (968)
T ss_pred cCCccEEECcCCccCCcCChhHhcCCCCCEEECcCceeccccChhHhC------CCCCCEEECcCCee-----eccCchh
Confidence 7889999999999988887 7889999999999998754444443332 66677777766641 1223445
Q ss_pred cccCCcccEEeeccCCCccCCCCCCCCCccEEEEeccCCCCccceEEeccCCceeeeccCcccchhhhccccccccCCCc
Q 002284 375 IEGFPKLRELHIVRCSKLQGTLPTHLTLLDILVVQNFTSLPALCKLRIDRCKKVVWRSTTDCESQLYKDISNQMFLGGPL 454 (943)
Q Consensus 375 ~~~~~~L~~L~l~~c~~l~~~~p~~l~~L~~L~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~l~~l~ls~n~l~~~~~ 454 (943)
+..+++|++|++++ +++.+.+|..+ ..+++|+.|++++|. +.
T Consensus 280 l~~l~~L~~L~Ls~-n~l~~~~p~~~-----------~~l~~L~~L~l~~n~----------------------~~---- 321 (968)
T PLN00113 280 IFSLQKLISLDLSD-NSLSGEIPELV-----------IQLQNLEILHLFSNN----------------------FT---- 321 (968)
T ss_pred HhhccCcCEEECcC-CeeccCCChhH-----------cCCCCCcEEECCCCc----------------------cC----
Confidence 56666777777776 45555555432 233444444443332 21
Q ss_pred cccCCCCceeeeeEeecCccccccchhhhhhcccccCeEEeecCCCcccchhhhhhhcCccceeceEEEecCCCcCccch
Q 002284 455 KLQLPKLDELDISIIIDGLSYIWQNETQLLQDIATLKRLKIERCPKLQFLEEEDQWQFGLSFRLEHLELINCQDLEKLPK 534 (943)
Q Consensus 455 ~~~l~~L~~L~Ls~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~~l~~l~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~ 534 (943)
...+..+..+++|+.|++++|.....++.. +..+++|+.|++++|.+.+.+|.
T Consensus 322 -----------------------~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~----l~~~~~L~~L~Ls~n~l~~~~p~ 374 (968)
T PLN00113 322 -----------------------GKIPVALTSLPRLQVLQLWSNKFSGEIPKN----LGKHNNLTVLDLSTNNLTGEIPE 374 (968)
T ss_pred -----------------------CcCChhHhcCCCCCEEECcCCCCcCcCChH----HhCCCCCcEEECCCCeeEeeCCh
Confidence 122234567788888888888644444443 77788899999999888888888
Q ss_pred hccCCCCcCeeeccCCCCCcccCCC-CCCCCccEEEEecCCCCCcCccccccCCCCCccEEEeecCCCcccccCc-CCCC
Q 002284 535 SLLSLSSLTEMRIHNCSSLVSFPEA-VLPSQLRVISIWDSGALKFLPEAWMLDNNSSLEILDIRHCHLLTYIAGV-QLPP 612 (943)
Q Consensus 535 ~~~~l~~L~~L~L~~n~~l~~~~~~-~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~-~~~~ 612 (943)
.+..+++|+.|++++|.....+|.. ..+++|+.|++++|...+.+|..+ ..+++|+.|++++|.+.+.++.. ..++
T Consensus 375 ~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~--~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 452 (968)
T PLN00113 375 GLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEF--TKLPLVYFLDISNNNLQGRINSRKWDMP 452 (968)
T ss_pred hHhCcCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEeeeECChhH--hcCCCCCEEECcCCcccCccChhhccCC
Confidence 8888888999999988766666543 236788888888888776777664 47888888888888876655542 3456
Q ss_pred CCceEEeccCcCccccccccCcccccccCCccceeeeecCCCcccccchhhHHHHhhhhhcCCCcccccEEEeecCCCch
Q 002284 613 SLKQLEIYNCDNLRTLTAEEGIHSSRRHTSLLECLEIHSCPSLTCLISKNELRAALDYLVVGNLPQALKFLSIWHCSKLE 692 (943)
Q Consensus 613 ~L~~L~l~~~~~L~~l~~~~~~~~~~~~~~~L~~L~i~~c~~l~~~~~~~~~~~~~~~~~~~~lp~~L~~L~l~~~~~l~ 692 (943)
+|+.|++++|.-...+|.. .-.++|+.|++++|...+
T Consensus 453 ~L~~L~L~~n~~~~~~p~~-------------------------------------------~~~~~L~~L~ls~n~l~~ 489 (968)
T PLN00113 453 SLQMLSLARNKFFGGLPDS-------------------------------------------FGSKRLENLDLSRNQFSG 489 (968)
T ss_pred CCcEEECcCceeeeecCcc-------------------------------------------cccccceEEECcCCccCC
Confidence 6777777777543333310 001479999999998888
Q ss_pred hhHhhhcccccccEEEeeccCCcccccccccCCCCccEEeccCCCCCcccCcCCccccccceeeeccccCCccCCCcCCC
Q 002284 693 SIVERLDNKISLEVIEIVSCENLKMLPHGLHKLWHLQEIDIQDCENLVSFPEGGLLSAKLKRLVIYGCKKLEALPEGMHN 772 (943)
Q Consensus 693 ~~~~~~~~l~~L~~L~l~~~~~~~~~p~~~~~l~~L~~L~l~~~~~l~~~p~~~~~l~~L~~L~l~~~~~l~~~p~~~~~ 772 (943)
.+|..+.++++|+.|++++|.+.+.+|..+.++++|++|+|++|...+.+|..+..+++|+.|++++|...+.+|..+..
T Consensus 490 ~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~ 569 (968)
T PLN00113 490 AVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGN 569 (968)
T ss_pred ccChhhhhhhccCEEECcCCcceeeCChHHcCccCCCEEECCCCcccccCChhHhCcccCCEEECCCCcccccCChhHhc
Confidence 88889999999999999999999999999999999999999999888899998989999999999999999999999999
Q ss_pred CCCCCceeecCCCCCccccCCCCCCCCcceEEecCCcchh
Q 002284 773 LSSLQYLTIGGVPSLLCFTEDGLFPTNLHSLEIDGMKIWK 812 (943)
Q Consensus 773 l~~L~~L~l~~~~~l~~~~~~~~~~~~L~~L~l~~c~~l~ 812 (943)
+++|+.|++++|+....+|.... +.++....+.+|+.+-
T Consensus 570 l~~L~~l~ls~N~l~~~~p~~~~-~~~~~~~~~~~n~~lc 608 (968)
T PLN00113 570 VESLVQVNISHNHLHGSLPSTGA-FLAINASAVAGNIDLC 608 (968)
T ss_pred CcccCEEeccCCcceeeCCCcch-hcccChhhhcCCcccc
Confidence 99999999999998888887644 4566666677776543
No 3
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.96 E-value=2.2e-32 Score=269.69 Aligned_cols=267 Identities=23% Similarity=0.298 Sum_probs=163.4
Q ss_pred ccCcccEEEecCccccccCccccCCCCCceeecCCCcccccchhhhhccccceeecCCCcccccccHHHhccccCceEEc
Q 002284 87 KLQRLRVFSLRGYLISEVPDSIGDLSYLRYLNLSGTQIRTLPESVNKLYNLHTLLLEGCRELKKKCADMGNLIKLHHLNN 166 (943)
Q Consensus 87 ~l~~L~~L~L~~n~i~~lp~~~~~l~~L~~L~Ls~n~i~~lp~~i~~L~~L~~L~L~~n~~~~~~p~~~~~L~~L~~L~l 166 (943)
.-.-+..|++++|.+..+-+.+.++..|.+|++++|++.++|++|+.+..++.|+.++|. +..+|+.++.+.+|++|+.
T Consensus 43 ~qv~l~~lils~N~l~~l~~dl~nL~~l~vl~~~~n~l~~lp~aig~l~~l~~l~vs~n~-ls~lp~~i~s~~~l~~l~~ 121 (565)
T KOG0472|consen 43 EQVDLQKLILSHNDLEVLREDLKNLACLTVLNVHDNKLSQLPAAIGELEALKSLNVSHNK-LSELPEQIGSLISLVKLDC 121 (565)
T ss_pred hhcchhhhhhccCchhhccHhhhcccceeEEEeccchhhhCCHHHHHHHHHHHhhcccch-HhhccHHHhhhhhhhhhhc
Confidence 445566677777777776666777777777777777777777777777777777777764 6667777777777777777
Q ss_pred CCCCCCccccccccccccccccCceEeccCCCCCcccccCcccccCceeecccccccCccchhhcccCCCCCCCeEEEEe
Q 002284 167 SNTDSLEEMPLGIGKLTCLLTLCNFVVGKDSGSGLRELKLLTHLCGTLNISKLENVKYVGDAMEAQLDGKKNLKVLMLEW 246 (943)
Q Consensus 167 ~~n~~~~~~p~~~~~L~~L~~L~~~~~~~~~~~~~~~l~~l~~L~~~l~~~~l~~~~~~~~~~~~~l~~~~~L~~L~l~~ 246 (943)
++|. ..++|.+++.+-.|..++.. .
T Consensus 122 s~n~-~~el~~~i~~~~~l~dl~~~------------------------------------------------------~ 146 (565)
T KOG0472|consen 122 SSNE-LKELPDSIGRLLDLEDLDAT------------------------------------------------------N 146 (565)
T ss_pred cccc-eeecCchHHHHhhhhhhhcc------------------------------------------------------c
Confidence 7777 66666666655544444110 1
Q ss_pred ecCCCCCCchhhhhHHhhhccCCCCCCcceEEEEeeCCCCCCcccCCCCcCCeeEEEEeCCCCCCCCCCCCCCCCCCeeE
Q 002284 247 TRSTNGLSSREAQTEKGVLDMLKPHRSLEQFCISGFGGKKFPTWLGYSLFSNLVTLKFQDCSMCTSMPSVGQLPSLKHLE 326 (943)
Q Consensus 247 n~~~~~~~~~~~~~~~~~l~~l~~~~~L~~L~l~~~~~~~~p~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~l~~L~~L~ 326 (943)
| .....|..++. +.++..+++.+|++....|..-.+..|++|+
T Consensus 147 N-----------------------------------~i~slp~~~~~--~~~l~~l~~~~n~l~~l~~~~i~m~~L~~ld 189 (565)
T KOG0472|consen 147 N-----------------------------------QISSLPEDMVN--LSKLSKLDLEGNKLKALPENHIAMKRLKHLD 189 (565)
T ss_pred c-----------------------------------ccccCchHHHH--HHHHHHhhccccchhhCCHHHHHHHHHHhcc
Confidence 1 11222322222 4445555555555444433222244455544
Q ss_pred EecCcCceeeCccccCCCCCCCCCCcceeecccccccccccccccCCccccCCcccEEeeccCCCccCCCCCCCCCccEE
Q 002284 327 VRGMSRVKRLGSEFYGNDSPIPFPCLETLHFAEMQEWEEWIPHGCSQEIEGFPKLRELHIVRCSKLQGTLPTHLTLLDIL 406 (943)
Q Consensus 327 L~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~~~~~~~L~~L~l~~c~~l~~~~p~~l~~L~~L 406 (943)
.-.|- ++. +|..++.+.+|+.|++.. |++. .+|.
T Consensus 190 ~~~N~-L~t-----------------------------------lP~~lg~l~~L~~LyL~~-Nki~-~lPe-------- 223 (565)
T KOG0472|consen 190 CNSNL-LET-----------------------------------LPPELGGLESLELLYLRR-NKIR-FLPE-------- 223 (565)
T ss_pred cchhh-hhc-----------------------------------CChhhcchhhhHHHHhhh-cccc-cCCC--------
Confidence 43331 111 234445555555566655 5555 4553
Q ss_pred EEeccCCCCccceEEeccCCceeeeccCcccchhhhccccccccCCCccccCCCCceeeeeEeecCccccccchhhhhhc
Q 002284 407 VVQNFTSLPALCKLRIDRCKKVVWRSTTDCESQLYKDISNQMFLGGPLKLQLPKLDELDISIIIDGLSYIWQNETQLLQD 486 (943)
Q Consensus 407 ~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~l~~l~ls~n~l~~~~~~~~l~~L~~L~Ls~~~~~~~~~~~~~~~~~~~ 486 (943)
|+ +|..+..+.++.|++ ..++.....+
T Consensus 224 ----f~----------------------gcs~L~Elh~g~N~i---------------------------~~lpae~~~~ 250 (565)
T KOG0472|consen 224 ----FP----------------------GCSLLKELHVGENQI---------------------------EMLPAEHLKH 250 (565)
T ss_pred ----CC----------------------ccHHHHHHHhcccHH---------------------------HhhHHHHhcc
Confidence 23 333333444433333 2344455567
Q ss_pred ccccCeEEeecCCCcccchhhhhhhcCccceeceEEEecCCCcCccchhccCCCCcCeeeccCCCC
Q 002284 487 IATLKRLKIERCPKLQFLEEEDQWQFGLSFRLEHLELINCQDLEKLPKSLLSLSSLTEMRIHNCSS 552 (943)
Q Consensus 487 l~~L~~L~l~~~~~l~~l~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~L~~n~~ 552 (943)
++++..|++.+|. ++.+|++ +..+.+|+.||+++|.+ ..+|..++++ .|+.|.+.||+.
T Consensus 251 L~~l~vLDLRdNk-lke~Pde----~clLrsL~rLDlSNN~i-s~Lp~sLgnl-hL~~L~leGNPl 309 (565)
T KOG0472|consen 251 LNSLLVLDLRDNK-LKEVPDE----ICLLRSLERLDLSNNDI-SSLPYSLGNL-HLKFLALEGNPL 309 (565)
T ss_pred cccceeeeccccc-cccCchH----HHHhhhhhhhcccCCcc-ccCCcccccc-eeeehhhcCCch
Confidence 7888888888884 8888877 77888999999999855 5688889999 999999999983
No 4
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.95 E-value=2.4e-32 Score=269.38 Aligned_cols=468 Identities=21% Similarity=0.216 Sum_probs=278.3
Q ss_pred cccccccccEEeecccCCCCCCcchhccchhhhccCcccEEEecCccccccCccccCCCCCceeecCCCcccccchhhhh
Q 002284 54 DLYDIQHLRTLLPVTLLSSRPGYLARSILPRLLKLQRLRVFSLRGYLISEVPDSIGDLSYLRYLNLSGTQIRTLPESVNK 133 (943)
Q Consensus 54 ~~~~~~~Lr~L~~~~~~~l~~~~~~~~~~~~~~~l~~L~~L~L~~n~i~~lp~~~~~l~~L~~L~Ls~n~i~~lp~~i~~ 133 (943)
+..++..+.+|.+.++. ..+.|+++..+..++.|+.++|++..+|+.++.+..|+.|+.++|.+.++|++|+.
T Consensus 63 dl~nL~~l~vl~~~~n~-------l~~lp~aig~l~~l~~l~vs~n~ls~lp~~i~s~~~l~~l~~s~n~~~el~~~i~~ 135 (565)
T KOG0472|consen 63 DLKNLACLTVLNVHDNK-------LSQLPAAIGELEALKSLNVSHNKLSELPEQIGSLISLVKLDCSSNELKELPDSIGR 135 (565)
T ss_pred hhhcccceeEEEeccch-------hhhCCHHHHHHHHHHHhhcccchHhhccHHHhhhhhhhhhhccccceeecCchHHH
Confidence 44455556666554432 45778888888888888888888888888888888888888888888888888888
Q ss_pred ccccceeecCCCcccccccHHHhccccCceEEcCCCCCCccccccccccccccccCceEeccCCCCCcccccCcccccCc
Q 002284 134 LYNLHTLLLEGCRELKKKCADMGNLIKLHHLNNSNTDSLEEMPLGIGKLTCLLTLCNFVVGKDSGSGLRELKLLTHLCGT 213 (943)
Q Consensus 134 L~~L~~L~L~~n~~~~~~p~~~~~L~~L~~L~l~~n~~~~~~p~~~~~L~~L~~L~~~~~~~~~~~~~~~l~~l~~L~~~ 213 (943)
+..|+.|+..+|+ +..+|++++.+.+|..|++.+|. +..+|++.-.|+.|++|+...+-- +..+.+++.++.|. .
T Consensus 136 ~~~l~dl~~~~N~-i~slp~~~~~~~~l~~l~~~~n~-l~~l~~~~i~m~~L~~ld~~~N~L--~tlP~~lg~l~~L~-~ 210 (565)
T KOG0472|consen 136 LLDLEDLDATNNQ-ISSLPEDMVNLSKLSKLDLEGNK-LKALPENHIAMKRLKHLDCNSNLL--ETLPPELGGLESLE-L 210 (565)
T ss_pred Hhhhhhhhccccc-cccCchHHHHHHHHHHhhccccc-hhhCCHHHHHHHHHHhcccchhhh--hcCChhhcchhhhH-H
Confidence 8888888888875 77788888888888888888888 777777655588888885443322 22333344443332 2
Q ss_pred eeecccccccCccchhhcccCCCCCCCeEEEEeecCCCCCCchhhhhHHhhhccCCCCCCcceEEEEeeCCCCCCcccCC
Q 002284 214 LNISKLENVKYVGDAMEAQLDGKKNLKVLMLEWTRSTNGLSSREAQTEKGVLDMLKPHRSLEQFCISGFGGKKFPTWLGY 293 (943)
Q Consensus 214 l~~~~l~~~~~~~~~~~~~l~~~~~L~~L~l~~n~~~~~~~~~~~~~~~~~l~~l~~~~~L~~L~l~~~~~~~~p~~~~~ 293 (943)
+++.+.+.. +...|.++..|.+++++.|.+.. -.-+.++.++.+..|+++.+...+.|+.+..
T Consensus 211 LyL~~Nki~------~lPef~gcs~L~Elh~g~N~i~~-----------lpae~~~~L~~l~vLDLRdNklke~Pde~cl 273 (565)
T KOG0472|consen 211 LYLRRNKIR------FLPEFPGCSLLKELHVGENQIEM-----------LPAEHLKHLNSLLVLDLRDNKLKEVPDEICL 273 (565)
T ss_pred HHhhhcccc------cCCCCCccHHHHHHHhcccHHHh-----------hHHHHhcccccceeeeccccccccCchHHHH
Confidence 222221111 11136777778888877776531 1123456788999999999999999998876
Q ss_pred CCcCCeeEEEEeCCCCCCCCCCCCCCCCCCeeEEecCcCceeeCccccCCCCCCCCCCcceeeccc-cccccc---cccc
Q 002284 294 SLFSNLVTLKFQDCSMCTSMPSVGQLPSLKHLEVRGMSRVKRLGSEFYGNDSPIPFPCLETLHFAE-MQEWEE---WIPH 369 (943)
Q Consensus 294 ~~l~~L~~L~L~~n~~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~-~~~l~~---~~~~ 369 (943)
+.+|++||+++|.+++..+.++++ .|+.|.+.||+. ..+..+.........++.|+.-...+ ...-++ -...
T Consensus 274 --LrsL~rLDlSNN~is~Lp~sLgnl-hL~~L~leGNPl-rTiRr~ii~~gT~~vLKyLrs~~~~dglS~se~~~e~~~t 349 (565)
T KOG0472|consen 274 --LRSLERLDLSNNDISSLPYSLGNL-HLKFLALEGNPL-RTIRREIISKGTQEVLKYLRSKIKDDGLSQSEGGTETAMT 349 (565)
T ss_pred --hhhhhhhcccCCccccCCcccccc-eeeehhhcCCch-HHHHHHHHcccHHHHHHHHHHhhccCCCCCCcccccccCC
Confidence 889999999999998877799999 999999999983 33322222211111122222100000 000000 0000
Q ss_pred ---ccCCccccCCcccEEeeccCCCccCCCCCCCCCccEEEEeccCCCCccceEEeccCCceeeeccCcccchhhhcccc
Q 002284 370 ---GCSQEIEGFPKLRELHIVRCSKLQGTLPTHLTLLDILVVQNFTSLPALCKLRIDRCKKVVWRSTTDCESQLYKDISN 446 (943)
Q Consensus 370 ---~~~~~~~~~~~L~~L~l~~c~~l~~~~p~~l~~L~~L~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~l~~l~ls~ 446 (943)
........+...+.|++++ -+++ .+|... |.. ..-.-....+++.
T Consensus 350 ~~~~~~~~~~~~i~tkiL~~s~-~qlt-~VPdEV----------fea--------------------~~~~~Vt~Vnfsk 397 (565)
T KOG0472|consen 350 LPSESFPDIYAIITTKILDVSD-KQLT-LVPDEV----------FEA--------------------AKSEIVTSVNFSK 397 (565)
T ss_pred CCCCcccchhhhhhhhhhcccc-cccc-cCCHHH----------HHH--------------------hhhcceEEEeccc
Confidence 0000112244566666666 5555 555322 000 0001122334444
Q ss_pred ccccCCCccc-cCCCC-ceeeeeEeecCccccccchhhhhhcccccCeEEeecCCCcccchhhhhhhcCccceeceEEEe
Q 002284 447 QMFLGGPLKL-QLPKL-DELDISIIIDGLSYIWQNETQLLQDIATLKRLKIERCPKLQFLEEEDQWQFGLSFRLEHLELI 524 (943)
Q Consensus 447 n~l~~~~~~~-~l~~L-~~L~Ls~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~~l~~l~~~~~~~~~~l~~L~~L~l~ 524 (943)
|++...|... .+..+ +.+.++ ++...+.+.....+++|..|++++|. +..+|.+ +..+..|+.|+++
T Consensus 398 NqL~elPk~L~~lkelvT~l~ls------nn~isfv~~~l~~l~kLt~L~L~NN~-Ln~LP~e----~~~lv~Lq~LnlS 466 (565)
T KOG0472|consen 398 NQLCELPKRLVELKELVTDLVLS------NNKISFVPLELSQLQKLTFLDLSNNL-LNDLPEE----MGSLVRLQTLNLS 466 (565)
T ss_pred chHhhhhhhhHHHHHHHHHHHhh------cCccccchHHHHhhhcceeeecccch-hhhcchh----hhhhhhhheeccc
Confidence 4444433211 11111 111222 11222334445566666666666664 5666655 5666667777777
Q ss_pred cCCCcCccchhccCCCCcCeeeccCCCCCcccCCCC--CCCCccEEEEecCCCCCcCccccccCCCCCccEEEeecCCCc
Q 002284 525 NCQDLEKLPKSLLSLSSLTEMRIHNCSSLVSFPEAV--LPSQLRVISIWDSGALKFLPEAWMLDNNSSLEILDIRHCHLL 602 (943)
Q Consensus 525 ~~~~~~~~~~~~~~l~~L~~L~L~~n~~l~~~~~~~--~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~L~~L~l~~n~~~ 602 (943)
.|++ ..+|..+..+..++.+-.++|+ ++.+++.+ .+.+|.+|++.+|. +..+|.. ++++++|++|++++|++-
T Consensus 467 ~NrF-r~lP~~~y~lq~lEtllas~nq-i~~vd~~~l~nm~nL~tLDL~nNd-lq~IPp~--LgnmtnL~hLeL~gNpfr 541 (565)
T KOG0472|consen 467 FNRF-RMLPECLYELQTLETLLASNNQ-IGSVDPSGLKNMRNLTTLDLQNND-LQQIPPI--LGNMTNLRHLELDGNPFR 541 (565)
T ss_pred cccc-ccchHHHhhHHHHHHHHhcccc-ccccChHHhhhhhhcceeccCCCc-hhhCChh--hccccceeEEEecCCccC
Confidence 7743 4566655555556555555554 55555442 25677777776666 5556655 457777777777777754
No 5
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=99.95 E-value=4.2e-29 Score=257.80 Aligned_cols=362 Identities=19% Similarity=0.214 Sum_probs=204.3
Q ss_pred CcccEEEecCcccccc-CccccCCCCCceeecCCCcccccchhhhhccccceeecCCCcccccccHHHhccccCceEEcC
Q 002284 89 QRLRVFSLRGYLISEV-PDSIGDLSYLRYLNLSGTQIRTLPESVNKLYNLHTLLLEGCRELKKKCADMGNLIKLHHLNNS 167 (943)
Q Consensus 89 ~~L~~L~L~~n~i~~l-p~~~~~l~~L~~L~Ls~n~i~~lp~~i~~L~~L~~L~L~~n~~~~~~p~~~~~L~~L~~L~l~ 167 (943)
..-++||+++|.+..+ +..|.++++|+.+++..|.++.||...+...+|+.|+|.+|.+...-.+++.-++.||.|||+
T Consensus 78 ~~t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt~IP~f~~~sghl~~L~L~~N~I~sv~se~L~~l~alrslDLS 157 (873)
T KOG4194|consen 78 SQTQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELTRIPRFGHESGHLEKLDLRHNLISSVTSEELSALPALRSLDLS 157 (873)
T ss_pred cceeeeeccccccccCcHHHHhcCCcceeeeeccchhhhcccccccccceeEEeeeccccccccHHHHHhHhhhhhhhhh
Confidence 3446788888888877 567788888888888888888888777777778888888886545555568888888888888
Q ss_pred CCCCCccccccccccccccccCceEeccCCCCCcccccCcccccCceeecccccccCccchhhcccCCCCCCCeEEEEee
Q 002284 168 NTDSLEEMPLGIGKLTCLLTLCNFVVGKDSGSGLRELKLLTHLCGTLNISKLENVKYVGDAMEAQLDGKKNLKVLMLEWT 247 (943)
Q Consensus 168 ~n~~~~~~p~~~~~L~~L~~L~~~~~~~~~~~~~~~l~~l~~L~~~l~~~~l~~~~~~~~~~~~~l~~~~~L~~L~l~~n 247 (943)
.|. +.++|.. .+....+++.|+|++|
T Consensus 158 rN~-is~i~~~-----------------------------------------------------sfp~~~ni~~L~La~N 183 (873)
T KOG4194|consen 158 RNL-ISEIPKP-----------------------------------------------------SFPAKVNIKKLNLASN 183 (873)
T ss_pred hch-hhcccCC-----------------------------------------------------CCCCCCCceEEeeccc
Confidence 887 5555421 1344467778888888
Q ss_pred cCCCCCCchhhhhHHhhhccCCCCCCcceEEEEeeCCCCCCcccCCCCcCCeeEEEEeCCCCCCCCC-CCCCCCCCCeeE
Q 002284 248 RSTNGLSSREAQTEKGVLDMLKPHRSLEQFCISGFGGKKFPTWLGYSLFSNLVTLKFQDCSMCTSMP-SVGQLPSLKHLE 326 (943)
Q Consensus 248 ~~~~~~~~~~~~~~~~~l~~l~~~~~L~~L~l~~~~~~~~p~~~~~~~l~~L~~L~L~~n~~~~~~~-~~~~l~~L~~L~ 326 (943)
+++.... ..|. .+.+|..|.|++|+++...+ .|..+++|+.|+
T Consensus 184 ~It~l~~-----------~~F~-------------------------~lnsL~tlkLsrNrittLp~r~Fk~L~~L~~Ld 227 (873)
T KOG4194|consen 184 RITTLET-----------GHFD-------------------------SLNSLLTLKLSRNRITTLPQRSFKRLPKLESLD 227 (873)
T ss_pred ccccccc-----------cccc-------------------------ccchheeeecccCcccccCHHHhhhcchhhhhh
Confidence 7753222 1222 24456666666666644444 555566666666
Q ss_pred EecCcCceeeCccccCCCCCCCCCCcceeecccccccccccccccCCccccCCcccEEeeccCCCccCCCCCCCCCccEE
Q 002284 327 VRGMSRVKRLGSEFYGNDSPIPFPCLETLHFAEMQEWEEWIPHGCSQEIEGFPKLRELHIVRCSKLQGTLPTHLTLLDIL 406 (943)
Q Consensus 327 L~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~~~~~~~L~~L~l~~c~~l~~~~p~~l~~L~~L 406 (943)
|..|..-...+..|.| +++|+.|.+..|.. .... ...|-.+.++++|+++. |++. .+....
T Consensus 228 LnrN~irive~ltFqg------L~Sl~nlklqrN~I-~kL~----DG~Fy~l~kme~l~L~~-N~l~-~vn~g~------ 288 (873)
T KOG4194|consen 228 LNRNRIRIVEGLTFQG------LPSLQNLKLQRNDI-SKLD----DGAFYGLEKMEHLNLET-NRLQ-AVNEGW------ 288 (873)
T ss_pred ccccceeeehhhhhcC------chhhhhhhhhhcCc-cccc----Ccceeeecccceeeccc-chhh-hhhccc------
Confidence 6666522222444444 56666666655531 1111 23344566666666666 5555 332211
Q ss_pred EEeccCCCCccceEEeccCCc--eeeeccCcccchhhhccccccccCCC--ccccCCCCceeeeeEeecCccccccchhh
Q 002284 407 VVQNFTSLPALCKLRIDRCKK--VVWRSTTDCESQLYKDISNQMFLGGP--LKLQLPKLDELDISIIIDGLSYIWQNETQ 482 (943)
Q Consensus 407 ~~~~~~~l~~L~~L~l~~~~~--~~~~~~~~~~~l~~l~ls~n~l~~~~--~~~~l~~L~~L~Ls~~~~~~~~~~~~~~~ 482 (943)
+-++.+|+.|+++.|.. +...+-..+++|++|+|++|.++..+ .+..+..|++|.|+ .+.+..+...
T Consensus 289 ----lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs-----~Nsi~~l~e~ 359 (873)
T KOG4194|consen 289 ----LFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLS-----HNSIDHLAEG 359 (873)
T ss_pred ----ccccchhhhhccchhhhheeecchhhhcccceeEeccccccccCChhHHHHHHHhhhhccc-----ccchHHHHhh
Confidence 23344444455544442 22233344555556666666665542 22355556666665 3444445555
Q ss_pred hhhcccccCeEEeecCCCcccchhhhhhhcCccceeceEEEecCCCcCccchhccCCCCcCeeeccCCCCCcccCCCCC-
Q 002284 483 LLQDIATLKRLKIERCPKLQFLEEEDQWQFGLSFRLEHLELINCQDLEKLPKSLLSLSSLTEMRIHNCSSLVSFPEAVL- 561 (943)
Q Consensus 483 ~~~~l~~L~~L~l~~~~~l~~l~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~L~~n~~l~~~~~~~~- 561 (943)
.|.++++|++|++++|..--.+.+. ...|.++++|+.|++.+|++-..-..+|.++++|++|+|.+|. +.++....|
T Consensus 360 af~~lssL~~LdLr~N~ls~~IEDa-a~~f~gl~~LrkL~l~gNqlk~I~krAfsgl~~LE~LdL~~Na-iaSIq~nAFe 437 (873)
T KOG4194|consen 360 AFVGLSSLHKLDLRSNELSWCIEDA-AVAFNGLPSLRKLRLTGNQLKSIPKRAFSGLEALEHLDLGDNA-IASIQPNAFE 437 (873)
T ss_pred HHHHhhhhhhhcCcCCeEEEEEecc-hhhhccchhhhheeecCceeeecchhhhccCcccceecCCCCc-ceeecccccc
Confidence 5666666666666665422222222 1225566666666666664433333356666666666666665 233333222
Q ss_pred CCCccEEEE
Q 002284 562 PSQLRVISI 570 (943)
Q Consensus 562 ~~~L~~L~l 570 (943)
+..|+.|.+
T Consensus 438 ~m~Lk~Lv~ 446 (873)
T KOG4194|consen 438 PMELKELVM 446 (873)
T ss_pred cchhhhhhh
Confidence 334555543
No 6
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.95 E-value=9.9e-27 Score=287.11 Aligned_cols=186 Identities=19% Similarity=0.234 Sum_probs=125.7
Q ss_pred CchhHHHHHHHhhccce-------EEEecccc--cccccccCCceeEEEEEeccCcccc-ccccccccccccEEeecccC
Q 002284 1 MHDLVNDLAQWAAGEMY-------FRMEYISE--VNKQQSFSRNLHHLSYIRGDYDGVK-RFEDLYDIQHLRTLLPVTLL 70 (943)
Q Consensus 1 mHDl~~dla~~~~~~e~-------~~~~~~~~--~~~~~~~~~~~~~ls~~~~~~~~~~-~~~~~~~~~~Lr~L~~~~~~ 70 (943)
|||++||||++++.++. +.|....- ........++++++++......... .-..|.++++|+.|.+....
T Consensus 490 MHdLl~~~~r~i~~~~~~~~~~r~~l~~~~di~~vl~~~~g~~~v~~i~l~~~~~~~~~i~~~aF~~m~~L~~L~~~~~~ 569 (1153)
T PLN03210 490 MHSLLQEMGKEIVRAQSNEPGEREFLVDAKDICDVLEDNTGTKKVLGITLDIDEIDELHIHENAFKGMRNLLFLKFYTKK 569 (1153)
T ss_pred hhhHHHHHHHHHHHhhcCCCCcceeEeCHHHHHHHHHhCcccceeeEEEeccCccceeeecHHHHhcCccccEEEEeccc
Confidence 99999999999987653 34433200 0001123467888887654443211 12356788888888775542
Q ss_pred CCCCCcchhccchhhhcc-CcccEEEecCccccccCccccCCCCCceeecCCCcccccchhhhhccccceeecCCCcccc
Q 002284 71 SSRPGYLARSILPRLLKL-QRLRVFSLRGYLISEVPDSIGDLSYLRYLNLSGTQIRTLPESVNKLYNLHTLLLEGCRELK 149 (943)
Q Consensus 71 ~l~~~~~~~~~~~~~~~l-~~L~~L~L~~n~i~~lp~~~~~l~~L~~L~Ls~n~i~~lp~~i~~L~~L~~L~L~~n~~~~ 149 (943)
.-..+.+...+|.++..+ .+||.|++.++.+..+|..| ...+|++|++++|.+..+|..+..+++|++|++++|..++
T Consensus 570 ~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~~lP~~f-~~~~L~~L~L~~s~l~~L~~~~~~l~~Lk~L~Ls~~~~l~ 648 (1153)
T PLN03210 570 WDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLRCMPSNF-RPENLVKLQMQGSKLEKLWDGVHSLTGLRNIDLRGSKNLK 648 (1153)
T ss_pred ccccccceeecCcchhhcCcccEEEEecCCCCCCCCCcC-CccCCcEEECcCccccccccccccCCCCCEEECCCCCCcC
Confidence 111223345667777644 56888888888888888877 4688888888888888888888888888888888877677
Q ss_pred cccHHHhccccCceEEcCCCCCCcccccccccccccccc
Q 002284 150 KKCADMGNLIKLHHLNNSNTDSLEEMPLGIGKLTCLLTL 188 (943)
Q Consensus 150 ~~p~~~~~L~~L~~L~l~~n~~~~~~p~~~~~L~~L~~L 188 (943)
.+|. ++.+++|++|++++|..+..+|..++.+++|+.|
T Consensus 649 ~ip~-ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L 686 (1153)
T PLN03210 649 EIPD-LSMATNLETLKLSDCSSLVELPSSIQYLNKLEDL 686 (1153)
T ss_pred cCCc-cccCCcccEEEecCCCCccccchhhhccCCCCEE
Confidence 7774 7778888888888877566666555555444444
No 7
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=99.94 E-value=3e-28 Score=251.47 Aligned_cols=391 Identities=18% Similarity=0.203 Sum_probs=247.7
Q ss_pred cCCceeEEEEEeccCccccccccccc--cccccEEeecccCCCCCCcchhccchhhh-ccCcccEEEecCccccccCccc
Q 002284 32 FSRNLHHLSYIRGDYDGVKRFEDLYD--IQHLRTLLPVTLLSSRPGYLARSILPRLL-KLQRLRVFSLRGYLISEVPDSI 108 (943)
Q Consensus 32 ~~~~~~~ls~~~~~~~~~~~~~~~~~--~~~Lr~L~~~~~~~l~~~~~~~~~~~~~~-~l~~L~~L~L~~n~i~~lp~~~ 108 (943)
.+...+-+......++... ...+.. .+.-++|.+ ++|.+. .+-..+| ++++|+.+.+.+|.++.+|...
T Consensus 50 c~c~~~lldcs~~~lea~~-~~~l~g~lp~~t~~Ldl------snNkl~-~id~~~f~nl~nLq~v~l~~N~Lt~IP~f~ 121 (873)
T KOG4194|consen 50 CPCNTRLLDCSDRELEAID-KSRLKGFLPSQTQTLDL------SNNKLS-HIDFEFFYNLPNLQEVNLNKNELTRIPRFG 121 (873)
T ss_pred CCCCceeeecCcccccccc-ccccCCcCccceeeeec------cccccc-cCcHHHHhcCCcceeeeeccchhhhccccc
Confidence 4455555555555444322 122222 234566755 344444 4444445 9999999999999999999888
Q ss_pred cCCCCCceeecCCCcccccc-hhhhhccccceeecCCCcccccccH-HHhccccCceEEcCCCCCCcccccc-ccccccc
Q 002284 109 GDLSYLRYLNLSGTQIRTLP-ESVNKLYNLHTLLLEGCRELKKKCA-DMGNLIKLHHLNNSNTDSLEEMPLG-IGKLTCL 185 (943)
Q Consensus 109 ~~l~~L~~L~Ls~n~i~~lp-~~i~~L~~L~~L~L~~n~~~~~~p~-~~~~L~~L~~L~l~~n~~~~~~p~~-~~~L~~L 185 (943)
....||+.|+|.+|.|+++. +++..++.|+.|||+.|. +..+|. .|..-.++++|+|++|. ++.+-.+ |..+.+|
T Consensus 122 ~~sghl~~L~L~~N~I~sv~se~L~~l~alrslDLSrN~-is~i~~~sfp~~~ni~~L~La~N~-It~l~~~~F~~lnsL 199 (873)
T KOG4194|consen 122 HESGHLEKLDLRHNLISSVTSEELSALPALRSLDLSRNL-ISEIPKPSFPAKVNIKKLNLASNR-ITTLETGHFDSLNSL 199 (873)
T ss_pred ccccceeEEeeeccccccccHHHHHhHhhhhhhhhhhch-hhcccCCCCCCCCCceEEeecccc-ccccccccccccchh
Confidence 88889999999999999994 689999999999999985 666665 48888899999999999 6666543 6666655
Q ss_pred cccCceEeccCCCCCcccccCcccccCceeecccccccCccchhhcccCCCCCCCeEEEEeecCCCCCCchhhhhHHhhh
Q 002284 186 LTLCNFVVGKDSGSGLRELKLLTHLCGTLNISKLENVKYVGDAMEAQLDGKKNLKVLMLEWTRSTNGLSSREAQTEKGVL 265 (943)
Q Consensus 186 ~~L~~~~~~~~~~~~~~~l~~l~~L~~~l~~~~l~~~~~~~~~~~~~l~~~~~L~~L~l~~n~~~~~~~~~~~~~~~~~l 265 (943)
.+|.+..+ ++... . ...|+++++|+.|+|..|++.. ...
T Consensus 200 ~tlkLsrN------------------------rittL--p----~r~Fk~L~~L~~LdLnrN~iri-----------ve~ 238 (873)
T KOG4194|consen 200 LTLKLSRN------------------------RITTL--P----QRSFKRLPKLESLDLNRNRIRI-----------VEG 238 (873)
T ss_pred eeeecccC------------------------ccccc--C----HHHhhhcchhhhhhccccceee-----------ehh
Confidence 55522111 11000 0 1114555666666666555420 001
Q ss_pred ccCCCCCCcceEEEEeeCCCCCCcccCCCCcCCeeEEEEeCCCCCCCCC-CCCCCCCCCeeEEecCcCceeeCccccCCC
Q 002284 266 DMLKPHRSLEQFCISGFGGKKFPTWLGYSLFSNLVTLKFQDCSMCTSMP-SVGQLPSLKHLEVRGMSRVKRLGSEFYGND 344 (943)
Q Consensus 266 ~~l~~~~~L~~L~l~~~~~~~~p~~~~~~~l~~L~~L~L~~n~~~~~~~-~~~~l~~L~~L~L~~~~~~~~~~~~~~~~~ 344 (943)
-.|+. +++|+.|.+..|.+...-. .|.++.++++|+|+.|+....-....+|
T Consensus 239 ltFqg-------------------------L~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfg-- 291 (873)
T KOG4194|consen 239 LTFQG-------------------------LPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFG-- 291 (873)
T ss_pred hhhcC-------------------------chhhhhhhhhhcCcccccCcceeeecccceeecccchhhhhhcccccc--
Confidence 12233 4555555555555544333 4555555555555555543333333344
Q ss_pred CCCCCCCcceeecccccccccccccccCCccccCCcccEEeeccCCCccCCCCCCCCCccEEEEeccCCCCccceEEecc
Q 002284 345 SPIPFPCLETLHFAEMQEWEEWIPHGCSQEIEGFPKLRELHIVRCSKLQGTLPTHLTLLDILVVQNFTSLPALCKLRIDR 424 (943)
Q Consensus 345 ~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~~~~~~~L~~L~l~~c~~l~~~~p~~l~~L~~L~~~~~~~l~~L~~L~l~~ 424 (943)
+.+|+.|++++|. ++.+ -++.....++|++|++++ |+++ .++..- |..+..|++|.++
T Consensus 292 ----Lt~L~~L~lS~Na-I~ri----h~d~WsftqkL~~LdLs~-N~i~-~l~~~s----------f~~L~~Le~LnLs- 349 (873)
T KOG4194|consen 292 ----LTSLEQLDLSYNA-IQRI----HIDSWSFTQKLKELDLSS-NRIT-RLDEGS----------FRVLSQLEELNLS- 349 (873)
T ss_pred ----cchhhhhccchhh-hhee----ecchhhhcccceeEeccc-cccc-cCChhH----------HHHHHHhhhhccc-
Confidence 5555555555553 1111 123445677888888888 7777 555422 3334444444444
Q ss_pred CCceeeeccCcccchhhhccccccccCC--CccccCCCCceeeeeEeecCccccccchhhhhhcccccCeEEeecCCCcc
Q 002284 425 CKKVVWRSTTDCESQLYKDISNQMFLGG--PLKLQLPKLDELDISIIIDGLSYIWQNETQLLQDIATLKRLKIERCPKLQ 502 (943)
Q Consensus 425 ~~~~~~~~~~~~~~l~~l~ls~n~l~~~--~~~~~l~~L~~L~Ls~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~~l~ 502 (943)
+|.++.. .++..+.+|+.|||+ .|.++.+-.-....|.++++|+.|.+.+|. ++
T Consensus 350 ---------------------~Nsi~~l~e~af~~lssL~~LdLr--~N~ls~~IEDaa~~f~gl~~LrkL~l~gNq-lk 405 (873)
T KOG4194|consen 350 ---------------------HNSIDHLAEGAFVGLSSLHKLDLR--SNELSWCIEDAAVAFNGLPSLRKLRLTGNQ-LK 405 (873)
T ss_pred ---------------------ccchHHHHhhHHHHhhhhhhhcCc--CCeEEEEEecchhhhccchhhhheeecCce-ee
Confidence 4444433 233345555555555 444444434456678889999999999994 88
Q ss_pred cchhhhhhhcCccceeceEEEecCCCcCccchhccCCCCcCeeeccCC
Q 002284 503 FLEEEDQWQFGLSFRLEHLELINCQDLEKLPKSLLSLSSLTEMRIHNC 550 (943)
Q Consensus 503 ~l~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~L~~n 550 (943)
.++... |.++++|++|++.+|.+...-|.+|..+ .|++|.+..-
T Consensus 406 ~I~krA---fsgl~~LE~LdL~~NaiaSIq~nAFe~m-~Lk~Lv~nSs 449 (873)
T KOG4194|consen 406 SIPKRA---FSGLEALEHLDLGDNAIASIQPNAFEPM-ELKELVMNSS 449 (873)
T ss_pred ecchhh---hccCcccceecCCCCcceeecccccccc-hhhhhhhccc
Confidence 898877 9999999999999999888889999988 8999987653
No 8
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.94 E-value=5.6e-29 Score=271.30 Aligned_cols=130 Identities=22% Similarity=0.230 Sum_probs=86.7
Q ss_pred ccccEEEeecCCCchhhHhhhcccccccEEEeeccCCcccccccccCCCCccEEeccCCCCCcccCcCCccccccceeee
Q 002284 678 QALKFLSIWHCSKLESIVERLDNKISLEVIEIVSCENLKMLPHGLHKLWHLQEIDIQDCENLVSFPEGGLLSAKLKRLVI 757 (943)
Q Consensus 678 ~~L~~L~l~~~~~l~~~~~~~~~l~~L~~L~l~~~~~~~~~p~~~~~l~~L~~L~l~~~~~l~~~p~~~~~l~~L~~L~l 757 (943)
..|+.|++.+|......++.+.++.+|++|++++|+....-...+.++..|++|+||+| .++.+|.....++.|++|..
T Consensus 359 ~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGN-kL~~Lp~tva~~~~L~tL~a 437 (1081)
T KOG0618|consen 359 AALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGN-KLTTLPDTVANLGRLHTLRA 437 (1081)
T ss_pred HHHHHHHHhcCcccccchhhhccccceeeeeecccccccCCHHHHhchHHhHHHhcccc-hhhhhhHHHHhhhhhHHHhh
Confidence 35666677776666666667777777777777777554433345567777777777777 67777777777777777777
Q ss_pred ccccCCccCCCcCCCCCCCCceeecCCCCCccccCCCCCC-CCcceEEecCCcch
Q 002284 758 YGCKKLEALPEGMHNLSSLQYLTIGGVPSLLCFTEDGLFP-TNLHSLEIDGMKIW 811 (943)
Q Consensus 758 ~~~~~l~~~p~~~~~l~~L~~L~l~~~~~l~~~~~~~~~~-~~L~~L~l~~c~~l 811 (943)
.+|. +..+| .+..++.|+.+|++.|..-...-.... + ++|++||++||..+
T Consensus 438 hsN~-l~~fP-e~~~l~qL~~lDlS~N~L~~~~l~~~~-p~p~LkyLdlSGN~~l 489 (1081)
T KOG0618|consen 438 HSNQ-LLSFP-ELAQLPQLKVLDLSCNNLSEVTLPEAL-PSPNLKYLDLSGNTRL 489 (1081)
T ss_pred cCCc-eeech-hhhhcCcceEEecccchhhhhhhhhhC-CCcccceeeccCCccc
Confidence 7765 55666 667777777777776653322222222 3 77777777777753
No 9
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.93 E-value=8e-28 Score=262.35 Aligned_cols=456 Identities=22% Similarity=0.211 Sum_probs=280.5
Q ss_pred chhhh-ccCcccEEEecCccccccCccccCCCCCceeecCCCcccccchhhhhccccceeecCCCcccccccHHHhcccc
Q 002284 82 LPRLL-KLQRLRVFSLRGYLISEVPDSIGDLSYLRYLNLSGTQIRTLPESVNKLYNLHTLLLEGCRELKKKCADMGNLIK 160 (943)
Q Consensus 82 ~~~~~-~l~~L~~L~L~~n~i~~lp~~~~~l~~L~~L~Ls~n~i~~lp~~i~~L~~L~~L~L~~n~~~~~~p~~~~~L~~ 160 (943)
|-++. +.-+|++||+++|.+..+|..+..+.+|+.|+++.|.|..+|.+++++.+|++|.|..| ....+|.++..+++
T Consensus 37 pl~~~~~~v~L~~l~lsnn~~~~fp~~it~l~~L~~ln~s~n~i~~vp~s~~~~~~l~~lnL~~n-~l~~lP~~~~~lkn 115 (1081)
T KOG0618|consen 37 PLEFVEKRVKLKSLDLSNNQISSFPIQITLLSHLRQLNLSRNYIRSVPSSCSNMRNLQYLNLKNN-RLQSLPASISELKN 115 (1081)
T ss_pred chHHhhheeeeEEeeccccccccCCchhhhHHHHhhcccchhhHhhCchhhhhhhcchhheeccc-hhhcCchhHHhhhc
Confidence 33343 44448888888888888888888888888888888888888888888888888888876 47788888888888
Q ss_pred CceEEcCCCCCCccccccccccccccccCceEeccCCCCCcccccCcccccCceeecccccccCccchhhcccCCCCCCC
Q 002284 161 LHHLNNSNTDSLEEMPLGIGKLTCLLTLCNFVVGKDSGSGLRELKLLTHLCGTLNISKLENVKYVGDAMEAQLDGKKNLK 240 (943)
Q Consensus 161 L~~L~l~~n~~~~~~p~~~~~L~~L~~L~~~~~~~~~~~~~~~l~~l~~L~~~l~~~~l~~~~~~~~~~~~~l~~~~~L~ 240 (943)
|++|++++|. .+.+|.-+..++.+..+....+.......... ..++ .+..+.+.. .+...+..+.+
T Consensus 116 l~~LdlS~N~-f~~~Pl~i~~lt~~~~~~~s~N~~~~~lg~~~---ik~~--~l~~n~l~~------~~~~~i~~l~~-- 181 (1081)
T KOG0618|consen 116 LQYLDLSFNH-FGPIPLVIEVLTAEEELAASNNEKIQRLGQTS---IKKL--DLRLNVLGG------SFLIDIYNLTH-- 181 (1081)
T ss_pred ccccccchhc-cCCCchhHHhhhHHHHHhhhcchhhhhhcccc---chhh--hhhhhhccc------chhcchhhhhe--
Confidence 8888888888 77778777777776666443331111111001 1111 111111110 01111111222
Q ss_pred eEEEEeecCCCCCCchhhhhHHhhhccC-C----------CCCCcceEEEEeeCCCCCCcccCCCCcCCeeEEEEeCCCC
Q 002284 241 VLMLEWTRSTNGLSSREAQTEKGVLDML-K----------PHRSLEQFCISGFGGKKFPTWLGYSLFSNLVTLKFQDCSM 309 (943)
Q Consensus 241 ~L~l~~n~~~~~~~~~~~~~~~~~l~~l-~----------~~~~L~~L~l~~~~~~~~p~~~~~~~l~~L~~L~L~~n~~ 309 (943)
.|++.+|.++...-.. ...++.+ + .-++++.|+...+.....-.. ..-.+|++++++.|++
T Consensus 182 ~ldLr~N~~~~~dls~-----~~~l~~l~c~rn~ls~l~~~g~~l~~L~a~~n~l~~~~~~---p~p~nl~~~dis~n~l 253 (1081)
T KOG0618|consen 182 QLDLRYNEMEVLDLSN-----LANLEVLHCERNQLSELEISGPSLTALYADHNPLTTLDVH---PVPLNLQYLDISHNNL 253 (1081)
T ss_pred eeecccchhhhhhhhh-----ccchhhhhhhhcccceEEecCcchheeeeccCcceeeccc---cccccceeeecchhhh
Confidence 3555544442000000 0000000 0 112444444444443321111 1245788888888877
Q ss_pred CCCCCCCCCCCCCCeeEEecCcCceeeCccccCCCCCCCCCCcceeecccccccccccccccCCccccCCcccEEeeccC
Q 002284 310 CTSMPSVGQLPSLKHLEVRGMSRVKRLGSEFYGNDSPIPFPCLETLHFAEMQEWEEWIPHGCSQEIEGFPKLRELHIVRC 389 (943)
Q Consensus 310 ~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~~~~~~~L~~L~l~~c 389 (943)
.+...+++.+.+|+.+...+|.. ..++...+. ..+|+.|...+|. ++. +|.....+..|++|++..
T Consensus 254 ~~lp~wi~~~~nle~l~~n~N~l-~~lp~ri~~------~~~L~~l~~~~ne-l~y-----ip~~le~~~sL~tLdL~~- 319 (1081)
T KOG0618|consen 254 SNLPEWIGACANLEALNANHNRL-VALPLRISR------ITSLVSLSAAYNE-LEY-----IPPFLEGLKSLRTLDLQS- 319 (1081)
T ss_pred hcchHHHHhcccceEecccchhH-HhhHHHHhh------hhhHHHHHhhhhh-hhh-----CCCcccccceeeeeeehh-
Confidence 55544777788888888877764 333333332 5677777777663 332 345566788899999988
Q ss_pred CCccCCCCCCCCCccEEEEeccCCCCc-cceEEeccCCceeeecc--CcccchhhhccccccccCC--CccccCCCCcee
Q 002284 390 SKLQGTLPTHLTLLDILVVQNFTSLPA-LCKLRIDRCKKVVWRST--TDCESQLYKDISNQMFLGG--PLKLQLPKLDEL 464 (943)
Q Consensus 390 ~~l~~~~p~~l~~L~~L~~~~~~~l~~-L~~L~l~~~~~~~~~~~--~~~~~l~~l~ls~n~l~~~--~~~~~l~~L~~L 464 (943)
|++. .+|..+ +..... ++.+..+.+........ ...+.++.|++.+|.+++. |....+.+|+.|
T Consensus 320 N~L~-~lp~~~----------l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVL 388 (1081)
T KOG0618|consen 320 NNLP-SLPDNF----------LAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVL 388 (1081)
T ss_pred cccc-ccchHH----------HhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCcccccchhhhccccceeee
Confidence 7886 777633 222222 44455554443333322 2467789999999999886 677788889999
Q ss_pred eeeEeecCccccccchhhhhhcccccCeEEeecCCCcccchhhhhhhcCccceeceEEEecCCCcCccchhccCCCCcCe
Q 002284 465 DISIIIDGLSYIWQNETQLLQDIATLKRLKIERCPKLQFLEEEDQWQFGLSFRLEHLELINCQDLEKLPKSLLSLSSLTE 544 (943)
Q Consensus 465 ~Ls~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~~l~~l~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~L~~ 544 (943)
+|+ .+.+..++...+.++..|++|++++|. ++.++.. +..+..|++|...+|.+ ..+| .+..+++|+.
T Consensus 389 hLs-----yNrL~~fpas~~~kle~LeeL~LSGNk-L~~Lp~t----va~~~~L~tL~ahsN~l-~~fP-e~~~l~qL~~ 456 (1081)
T KOG0618|consen 389 HLS-----YNRLNSFPASKLRKLEELEELNLSGNK-LTTLPDT----VANLGRLHTLRAHSNQL-LSFP-ELAQLPQLKV 456 (1081)
T ss_pred eec-----ccccccCCHHHHhchHHhHHHhcccch-hhhhhHH----HHhhhhhHHHhhcCCce-eech-hhhhcCcceE
Confidence 988 677777888888888888888888884 7777755 67888888888888744 4566 6778888888
Q ss_pred eeccCCCCCcccCCCCCC-CCccEEEEecCCCCCcCccccccCCCCCccEEEeecC
Q 002284 545 MRIHNCSSLVSFPEAVLP-SQLRVISIWDSGALKFLPEAWMLDNNSSLEILDIRHC 599 (943)
Q Consensus 545 L~L~~n~~l~~~~~~~~~-~~L~~L~l~~~~~l~~~~~~~~~~~l~~L~~L~l~~n 599 (943)
+|++.|......-....+ ++|++||+++|.....-... +..+.++..+++.-+
T Consensus 457 lDlS~N~L~~~~l~~~~p~p~LkyLdlSGN~~l~~d~~~--l~~l~~l~~~~i~~~ 510 (1081)
T KOG0618|consen 457 LDLSCNNLSEVTLPEALPSPNLKYLDLSGNTRLVFDHKT--LKVLKSLSQMDITLN 510 (1081)
T ss_pred EecccchhhhhhhhhhCCCcccceeeccCCcccccchhh--hHHhhhhhheecccC
Confidence 888888754433334445 88888888888743222111 223445555555444
No 10
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.92 E-value=2.4e-24 Score=266.04 Aligned_cols=343 Identities=22% Similarity=0.290 Sum_probs=218.6
Q ss_pred cCccceeceEEEecCC------CcCccchhccCCC-CcCeeeccCCCCCcccCCCCCCCCccEEEEecCCCCCcCccccc
Q 002284 512 FGLSFRLEHLELINCQ------DLEKLPKSLLSLS-SLTEMRIHNCSSLVSFPEAVLPSQLRVISIWDSGALKFLPEAWM 584 (943)
Q Consensus 512 ~~~l~~L~~L~l~~~~------~~~~~~~~~~~l~-~L~~L~L~~n~~l~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~ 584 (943)
|.++++|+.|.+.++. ....+|..+..++ +|+.|++.+++ ++.+|....+.+|+.|++.+|. +..++..
T Consensus 554 F~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~-l~~lP~~f~~~~L~~L~L~~s~-l~~L~~~-- 629 (1153)
T PLN03210 554 FKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYP-LRCMPSNFRPENLVKLQMQGSK-LEKLWDG-- 629 (1153)
T ss_pred HhcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCC-CCCCCCcCCccCCcEEECcCcc-ccccccc--
Confidence 5566666666665432 1113444444443 46667766664 5556655556667777776665 4444444
Q ss_pred cCCCCCccEEEeecCCCcccccCcCCCCCCceEEeccCcCccccccccCcccccccCCccceeeeecCCCcccccchhhH
Q 002284 585 LDNNSSLEILDIRHCHLLTYIAGVQLPPSLKQLEIYNCDNLRTLTAEEGIHSSRRHTSLLECLEIHSCPSLTCLISKNEL 664 (943)
Q Consensus 585 ~~~l~~L~~L~l~~n~~~~~~~~~~~~~~L~~L~l~~~~~L~~l~~~~~~~~~~~~~~~L~~L~i~~c~~l~~~~~~~~~ 664 (943)
.+.+++|++|++++|..++.+|.....++|+.|++.+|..+..+|. .+..+++|+.|++.+|.+++.+
T Consensus 630 ~~~l~~Lk~L~Ls~~~~l~~ip~ls~l~~Le~L~L~~c~~L~~lp~------si~~L~~L~~L~L~~c~~L~~L------ 697 (1153)
T PLN03210 630 VHSLTGLRNIDLRGSKNLKEIPDLSMATNLETLKLSDCSSLVELPS------SIQYLNKLEDLDMSRCENLEIL------ 697 (1153)
T ss_pred cccCCCCCEEECCCCCCcCcCCccccCCcccEEEecCCCCccccch------hhhccCCCCEEeCCCCCCcCcc------
Confidence 2356777777777666666666656666677777777766666552 2355667777777777766655
Q ss_pred HHHhhhhhcCCCcccccEEEeecCCCchhhHhhhcccccccEEEeeccCCcccccccccCCCCccEEeccCCCCCc----
Q 002284 665 RAALDYLVVGNLPQALKFLSIWHCSKLESIVERLDNKISLEVIEIVSCENLKMLPHGLHKLWHLQEIDIQDCENLV---- 740 (943)
Q Consensus 665 ~~~~~~~~~~~lp~~L~~L~l~~~~~l~~~~~~~~~l~~L~~L~l~~~~~~~~~p~~~~~l~~L~~L~l~~~~~l~---- 740 (943)
+.+.-+++|+.|++++|..++.+|.. .++|+.|++++|.+ ..+|..+ .+++|++|++.++....
T Consensus 698 -------p~~i~l~sL~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i-~~lP~~~-~l~~L~~L~l~~~~~~~l~~~ 765 (1153)
T PLN03210 698 -------PTGINLKSLYRLNLSGCSRLKSFPDI---STNISWLDLDETAI-EEFPSNL-RLENLDELILCEMKSEKLWER 765 (1153)
T ss_pred -------CCcCCCCCCCEEeCCCCCCccccccc---cCCcCeeecCCCcc-ccccccc-cccccccccccccchhhcccc
Confidence 22222356777777777766666533 35677777777663 4456544 46777777777653211
Q ss_pred --ccC-cCCccccccceeeeccccCCccCCCcCCCCCCCCceeecCCCCCccccCCCCCCCCcceEEecCCcchhccccc
Q 002284 741 --SFP-EGGLLSAKLKRLVIYGCKKLEALPEGMHNLSSLQYLTIGGVPSLLCFTEDGLFPTNLHSLEIDGMKIWKSLMQL 817 (943)
Q Consensus 741 --~~p-~~~~~l~~L~~L~l~~~~~l~~~p~~~~~l~~L~~L~l~~~~~l~~~~~~~~~~~~L~~L~l~~c~~l~~~~~~ 817 (943)
.++ .....+++|+.|++++|+.++.+|.+++++++|+.|++++|..++.+|... .+++|+.|++++|..+...+.
T Consensus 766 ~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~~L~~~p~- 843 (1153)
T PLN03210 766 VQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-NLESLESLDLSGCSRLRTFPD- 843 (1153)
T ss_pred ccccchhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-CccccCEEECCCCCccccccc-
Confidence 111 112224578888888887777788888888888888888888787777765 367888888888877765442
Q ss_pred cCCCCCCCccEEEecCCCCcCcccCcccccccCCCCCCccEEEeecCCCCccccccc-CCCCCCeEeecCCCCCccCCC
Q 002284 818 GGFHRYTSLRRLAISGCDEDMVSFPLEDIRLGTTLPACLTQLEIFNFPNLERLSSSI-CDQNLTSLKLTNCPKLKYFPE 895 (943)
Q Consensus 818 ~~~~~l~~L~~L~l~~c~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~l~~l~~~~-~~~~L~~L~l~~C~~L~~~~~ 895 (943)
..++|++|++++ +.++.+|... ..+++|+.|++.+|++++.++... .+++|+.|.+++|++|+.++.
T Consensus 844 ----~~~nL~~L~Ls~--n~i~~iP~si-----~~l~~L~~L~L~~C~~L~~l~~~~~~L~~L~~L~l~~C~~L~~~~l 911 (1153)
T PLN03210 844 ----ISTNISDLNLSR--TGIEEVPWWI-----EKFSNLSFLDMNGCNNLQRVSLNISKLKHLETVDFSDCGALTEASW 911 (1153)
T ss_pred ----cccccCEeECCC--CCCccChHHH-----hcCCCCCEEECCCCCCcCccCcccccccCCCeeecCCCcccccccC
Confidence 236788888877 4566666533 356778888888888888776532 567777888888888876643
No 11
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.91 E-value=7.5e-27 Score=242.62 Aligned_cols=252 Identities=19% Similarity=0.209 Sum_probs=167.3
Q ss_pred CcceEEEEeeCCCCCCcccCCCCcCCeeEEEEeCCCCCCCCCCCCCCCCCCeeEEecCcCceeeCccccCCCCCCCCCCc
Q 002284 273 SLEQFCISGFGGKKFPTWLGYSLFSNLVTLKFQDCSMCTSMPSVGQLPSLKHLEVRGMSRVKRLGSEFYGNDSPIPFPCL 352 (943)
Q Consensus 273 ~L~~L~l~~~~~~~~p~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~~L 352 (943)
++-.|.+++|.+..+|..++ -.++.|-.|+|++|++...+|....+..|++|.|++|+....--.. ..++++|
T Consensus 127 n~iVLNLS~N~IetIPn~lf-inLtDLLfLDLS~NrLe~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQ------LPsmtsL 199 (1255)
T KOG0444|consen 127 NSIVLNLSYNNIETIPNSLF-INLTDLLFLDLSNNRLEMLPPQIRRLSMLQTLKLSNNPLNHFQLRQ------LPSMTSL 199 (1255)
T ss_pred CcEEEEcccCccccCCchHH-HhhHhHhhhccccchhhhcCHHHHHHhhhhhhhcCCChhhHHHHhc------Cccchhh
Confidence 33344444445566666555 2467778888888888666667778888888888888732110000 1124455
Q ss_pred ceeecccccccccccccccCCccccCCcccEEeeccCCCccCCCCCCCCCccEEEEeccCCCCccceEEeccCCceeeec
Q 002284 353 ETLHFAEMQEWEEWIPHGCSQEIEGFPKLRELHIVRCSKLQGTLPTHLTLLDILVVQNFTSLPALCKLRIDRCKKVVWRS 432 (943)
Q Consensus 353 ~~L~l~~~~~l~~~~~~~~~~~~~~~~~L~~L~l~~c~~l~~~~p~~l~~L~~L~~~~~~~l~~L~~L~l~~~~~~~~~~ 432 (943)
+.|++++......- +|..+..+.+|..+|++. |++. .+|..+ -.+++|+.|++++|....
T Consensus 200 ~vLhms~TqRTl~N----~Ptsld~l~NL~dvDlS~-N~Lp-~vPecl-----------y~l~~LrrLNLS~N~ite--- 259 (1255)
T KOG0444|consen 200 SVLHMSNTQRTLDN----IPTSLDDLHNLRDVDLSE-NNLP-IVPECL-----------YKLRNLRRLNLSGNKITE--- 259 (1255)
T ss_pred hhhhcccccchhhc----CCCchhhhhhhhhccccc-cCCC-cchHHH-----------hhhhhhheeccCcCceee---
Confidence 55555554321111 466777788888888887 7776 667543 234455555555544222
Q ss_pred cCcccchhhhccccccccCCCccccCCCCceeeeeEeecCccccccchhhhhhcccccCeEEeecCCCcccchhhhhhhc
Q 002284 433 TTDCESQLYKDISNQMFLGGPLKLQLPKLDELDISIIIDGLSYIWQNETQLLQDIATLKRLKIERCPKLQFLEEEDQWQF 512 (943)
Q Consensus 433 ~~~~~~l~~l~ls~n~l~~~~~~~~l~~L~~L~Ls~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~~l~~l~~~~~~~~ 512 (943)
. .+. .....+|++|++++|. ++.+|.. +
T Consensus 260 -------------------L------------~~~----------------~~~W~~lEtLNlSrNQ-Lt~LP~a----v 287 (1255)
T KOG0444|consen 260 -------------------L------------NMT----------------EGEWENLETLNLSRNQ-LTVLPDA----V 287 (1255)
T ss_pred -------------------e------------ecc----------------HHHHhhhhhhccccch-hccchHH----H
Confidence 1 111 1234566777777774 7777766 7
Q ss_pred CccceeceEEEecCCCc-CccchhccCCCCcCeeeccCCCCCcccCCCCC-CCCccEEEEecCCCCCcCccccccCCCCC
Q 002284 513 GLSFRLEHLELINCQDL-EKLPKSLLSLSSLTEMRIHNCSSLVSFPEAVL-PSQLRVISIWDSGALKFLPEAWMLDNNSS 590 (943)
Q Consensus 513 ~~l~~L~~L~l~~~~~~-~~~~~~~~~l~~L~~L~L~~n~~l~~~~~~~~-~~~L~~L~l~~~~~l~~~~~~~~~~~l~~ 590 (943)
..+++|+.|.+.+|+.. .-+|++++++.+|+++...+|. ++-+|+... +..|+.|.++.|+ +-.+|..+ +-++.
T Consensus 288 cKL~kL~kLy~n~NkL~FeGiPSGIGKL~~Levf~aanN~-LElVPEglcRC~kL~kL~L~~Nr-LiTLPeaI--HlL~~ 363 (1255)
T KOG0444|consen 288 CKLTKLTKLYANNNKLTFEGIPSGIGKLIQLEVFHAANNK-LELVPEGLCRCVKLQKLKLDHNR-LITLPEAI--HLLPD 363 (1255)
T ss_pred hhhHHHHHHHhccCcccccCCccchhhhhhhHHHHhhccc-cccCchhhhhhHHHHHhcccccc-eeechhhh--hhcCC
Confidence 88899999999888653 3589999999999999999884 777776554 7889999998888 56678774 36899
Q ss_pred ccEEEeecCCCcccccC
Q 002284 591 LEILDIRHCHLLTYIAG 607 (943)
Q Consensus 591 L~~L~l~~n~~~~~~~~ 607 (943)
|+.||+..|+.+...|.
T Consensus 364 l~vLDlreNpnLVMPPK 380 (1255)
T KOG0444|consen 364 LKVLDLRENPNLVMPPK 380 (1255)
T ss_pred cceeeccCCcCccCCCC
Confidence 99999999988776554
No 12
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.89 E-value=2.7e-25 Score=231.15 Aligned_cols=367 Identities=21% Similarity=0.260 Sum_probs=208.6
Q ss_pred ceeEEEEEeccCccccccccccccccccEEeecccCCCCCCcchhccchhhhccCcccEEEecCccccccCccccCCCCC
Q 002284 35 NLHHLSYIRGDYDGVKRFEDLYDIQHLRTLLPVTLLSSRPGYLARSILPRLLKLQRLRVFSLRGYLISEVPDSIGDLSYL 114 (943)
Q Consensus 35 ~~~~ls~~~~~~~~~~~~~~~~~~~~Lr~L~~~~~~~l~~~~~~~~~~~~~~~l~~L~~L~L~~n~i~~lp~~~~~l~~L 114 (943)
=||.+.+..+++....-......++.++.|.+.+.. ...+|.++..+.+|+.|.+++|++..+-..++.|+.|
T Consensus 8 FVrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~-------L~~vPeEL~~lqkLEHLs~~HN~L~~vhGELs~Lp~L 80 (1255)
T KOG0444|consen 8 FVRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTK-------LEQVPEELSRLQKLEHLSMAHNQLISVHGELSDLPRL 80 (1255)
T ss_pred eeecccccCCcCCCCcCchhHHHhhheeEEEechhh-------hhhChHHHHHHhhhhhhhhhhhhhHhhhhhhccchhh
Confidence 355555555544322111234456666666664432 3456666667777777777777766666666667777
Q ss_pred ceeecCCCccc--ccchhhhhccccceeecCCCcccccccHHHhccccCceEEcCCCCCCcccccc-ccccccccccCce
Q 002284 115 RYLNLSGTQIR--TLPESVNKLYNLHTLLLEGCRELKKKCADMGNLIKLHHLNNSNTDSLEEMPLG-IGKLTCLLTLCNF 191 (943)
Q Consensus 115 ~~L~Ls~n~i~--~lp~~i~~L~~L~~L~L~~n~~~~~~p~~~~~L~~L~~L~l~~n~~~~~~p~~-~~~L~~L~~L~~~ 191 (943)
|.+++++|++. .||..|-+|..|.+|||++|. +...|..+..-+++-+|++++|+ +..+|.. +-+|+.|-.|++.
T Consensus 81 Rsv~~R~N~LKnsGiP~diF~l~dLt~lDLShNq-L~EvP~~LE~AKn~iVLNLS~N~-IetIPn~lfinLtDLLfLDLS 158 (1255)
T KOG0444|consen 81 RSVIVRDNNLKNSGIPTDIFRLKDLTILDLSHNQ-LREVPTNLEYAKNSIVLNLSYNN-IETIPNSLFINLTDLLFLDLS 158 (1255)
T ss_pred HHHhhhccccccCCCCchhcccccceeeecchhh-hhhcchhhhhhcCcEEEEcccCc-cccCCchHHHhhHhHhhhccc
Confidence 77777777655 456666677777777777764 66666667666777777777776 6666654 4555555555322
Q ss_pred EeccCCCCCcccccCcccccCceeecccccccCccchhhcccCCCCCCCeEEEEeecCCCCCCchhhhhHHhhhccCCCC
Q 002284 192 VVGKDSGSGLRELKLLTHLCGTLNISKLENVKYVGDAMEAQLDGKKNLKVLMLEWTRSTNGLSSREAQTEKGVLDMLKPH 271 (943)
Q Consensus 192 ~~~~~~~~~~~~l~~l~~L~~~l~~~~l~~~~~~~~~~~~~l~~~~~L~~L~l~~n~~~~~~~~~~~~~~~~~l~~l~~~ 271 (943)
.+ .+ +.++..+..+.+|++|.+++|++. .-.+..+..+
T Consensus 159 ~N------------------------rL-------e~LPPQ~RRL~~LqtL~Ls~NPL~-----------hfQLrQLPsm 196 (1255)
T KOG0444|consen 159 NN------------------------RL-------EMLPPQIRRLSMLQTLKLSNNPLN-----------HFQLRQLPSM 196 (1255)
T ss_pred cc------------------------hh-------hhcCHHHHHHhhhhhhhcCCChhh-----------HHHHhcCccc
Confidence 11 11 222333455566666666666541 1122333344
Q ss_pred CCcceEEEEeeC--CCCCCcccCCCCcCCeeEEEEeCCCCCCCCCCCCCCCCCCeeEEecCcCceeeCccccCCCCCCCC
Q 002284 272 RSLEQFCISGFG--GKKFPTWLGYSLFSNLVTLKFQDCSMCTSMPSVGQLPSLKHLEVRGMSRVKRLGSEFYGNDSPIPF 349 (943)
Q Consensus 272 ~~L~~L~l~~~~--~~~~p~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~ 349 (943)
+.|+.|.+++.. ...+|..+.. +.+|..++++.|.+...+..+..+++|+.|+|++|.. +.+.
T Consensus 197 tsL~vLhms~TqRTl~N~Ptsld~--l~NL~dvDlS~N~Lp~vPecly~l~~LrrLNLS~N~i-teL~------------ 261 (1255)
T KOG0444|consen 197 TSLSVLHMSNTQRTLDNIPTSLDD--LHNLRDVDLSENNLPIVPECLYKLRNLRRLNLSGNKI-TELN------------ 261 (1255)
T ss_pred hhhhhhhcccccchhhcCCCchhh--hhhhhhccccccCCCcchHHHhhhhhhheeccCcCce-eeee------------
Confidence 455555555543 2355665543 6677777777776643333566667777777777652 1111
Q ss_pred CCcceeecccccccccccccccCCccccCCcccEEeeccCCCccCCCCCCCCCccEEEEeccCCCCccceEEeccCCcee
Q 002284 350 PCLETLHFAEMQEWEEWIPHGCSQEIEGFPKLRELHIVRCSKLQGTLPTHLTLLDILVVQNFTSLPALCKLRIDRCKKVV 429 (943)
Q Consensus 350 ~~L~~L~l~~~~~l~~~~~~~~~~~~~~~~~L~~L~l~~c~~l~~~~p~~l~~L~~L~~~~~~~l~~L~~L~l~~~~~~~ 429 (943)
...+.-.+|++|+++. |+++ .+|..+ ..++.|+.|.+.+|....
T Consensus 262 -----------------------~~~~~W~~lEtLNlSr-NQLt-~LP~av-----------cKL~kL~kLy~n~NkL~F 305 (1255)
T KOG0444|consen 262 -----------------------MTEGEWENLETLNLSR-NQLT-VLPDAV-----------CKLTKLTKLYANNNKLTF 305 (1255)
T ss_pred -----------------------ccHHHHhhhhhhcccc-chhc-cchHHH-----------hhhHHHHHHHhccCcccc
Confidence 1123345677777777 6776 666543 233344444433332110
Q ss_pred eeccCcccchhhhccccccccCCCccccCCCCceeeeeEeecCccccccchhhhhhcccccCeEEeecCCCcccchhhhh
Q 002284 430 WRSTTDCESQLYKDISNQMFLGGPLKLQLPKLDELDISIIIDGLSYIWQNETQLLQDIATLKRLKIERCPKLQFLEEEDQ 509 (943)
Q Consensus 430 ~~~~~~~~~l~~l~ls~n~l~~~~~~~~l~~L~~L~Ls~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~~l~~l~~~~~ 509 (943)
.|+| +-.+.+.+|+.+..++| ++.-+|++
T Consensus 306 --------------------eGiP----------------------------SGIGKL~~Levf~aanN-~LElVPEg-- 334 (1255)
T KOG0444|consen 306 --------------------EGIP----------------------------SGIGKLIQLEVFHAANN-KLELVPEG-- 334 (1255)
T ss_pred --------------------cCCc----------------------------cchhhhhhhHHHHhhcc-ccccCchh--
Confidence 0111 11234455555555555 35555655
Q ss_pred hhcCccceeceEEEecCCCcCccchhccCCCCcCeeeccCCCCCcccC
Q 002284 510 WQFGLSFRLEHLELINCQDLEKLPKSLLSLSSLTEMRIHNCSSLVSFP 557 (943)
Q Consensus 510 ~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~L~~n~~l~~~~ 557 (943)
+..+..|+.|.++.|+.+ .+|.++.-++.|+.||+..|+.+.-.|
T Consensus 335 --lcRC~kL~kL~L~~NrLi-TLPeaIHlL~~l~vLDlreNpnLVMPP 379 (1255)
T KOG0444|consen 335 --LCRCVKLQKLKLDHNRLI-TLPEAIHLLPDLKVLDLRENPNLVMPP 379 (1255)
T ss_pred --hhhhHHHHHhccccccee-echhhhhhcCCcceeeccCCcCccCCC
Confidence 677788888888877554 577777778888888888887665433
No 13
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=99.85 E-value=2.5e-21 Score=225.58 Aligned_cols=300 Identities=26% Similarity=0.271 Sum_probs=194.3
Q ss_pred CchhHHHHHHHhhc-----cceEEEecc--cccccccccCCceeEEEEEeccCccccccccccccccccEEeecccCCCC
Q 002284 1 MHDLVNDLAQWAAG-----EMYFRMEYI--SEVNKQQSFSRNLHHLSYIRGDYDGVKRFEDLYDIQHLRTLLPVTLLSSR 73 (943)
Q Consensus 1 mHDl~~dla~~~~~-----~e~~~~~~~--~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~~~~Lr~L~~~~~~~l~ 73 (943)
|||+|||+|.|+|+ .|.+++... .........+..+||+++..+..... ..-..+++|+||.+..+.+
T Consensus 483 mHDvvRe~al~ias~~~~~~e~~iv~~~~~~~~~~~~~~~~~~rr~s~~~~~~~~~---~~~~~~~~L~tLll~~n~~-- 557 (889)
T KOG4658|consen 483 MHDVVREMALWIASDFGKQEENQIVSDGVGLSEIPQVKSWNSVRRMSLMNNKIEHI---AGSSENPKLRTLLLQRNSD-- 557 (889)
T ss_pred eeHHHHHHHHHHhccccccccceEEECCcCccccccccchhheeEEEEeccchhhc---cCCCCCCccceEEEeecch--
Confidence 99999999999999 454444431 01112233457899999998876432 3345677999999987641
Q ss_pred CCcchhccchhhh-ccCcccEEEecCcc-ccccCccccCCCCCceeecCCCcccccchhhhhccccceeecCCCcccccc
Q 002284 74 PGYLARSILPRLL-KLQRLRVFSLRGYL-ISEVPDSIGDLSYLRYLNLSGTQIRTLPESVNKLYNLHTLLLEGCRELKKK 151 (943)
Q Consensus 74 ~~~~~~~~~~~~~-~l~~L~~L~L~~n~-i~~lp~~~~~l~~L~~L~Ls~n~i~~lp~~i~~L~~L~~L~L~~n~~~~~~ 151 (943)
-...++.+|| .++.||+|||++|. ++.+|++|++|.+||||+|+++.|+.+|..+++|..|.+|++.++.....+
T Consensus 558 ---~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~L~~t~I~~LP~~l~~Lk~L~~Lnl~~~~~l~~~ 634 (889)
T KOG4658|consen 558 ---WLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLDLSDTGISHLPSGLGNLKKLIYLNLEVTGRLESI 634 (889)
T ss_pred ---hhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhcccccCCCccccchHHHHHHhhheeccccccccccc
Confidence 1467788888 89999999999886 889999999999999999999999999999999999999999998777777
Q ss_pred cHHHhccccCceEEcCCCCCCccccccccccccccccCceEeccCCCCCcccccCcccccC---ceeecccccccCccch
Q 002284 152 CADMGNLIKLHHLNNSNTDSLEEMPLGIGKLTCLLTLCNFVVGKDSGSGLRELKLLTHLCG---TLNISKLENVKYVGDA 228 (943)
Q Consensus 152 p~~~~~L~~L~~L~l~~n~~~~~~p~~~~~L~~L~~L~~~~~~~~~~~~~~~l~~l~~L~~---~l~~~~l~~~~~~~~~ 228 (943)
|..+..|.+||+|.+.... ...-...++.+.+|++|..+.....+...+..+..+..|+. .+.+.. .....
T Consensus 635 ~~i~~~L~~Lr~L~l~~s~-~~~~~~~l~el~~Le~L~~ls~~~~s~~~~e~l~~~~~L~~~~~~l~~~~-----~~~~~ 708 (889)
T KOG4658|consen 635 PGILLELQSLRVLRLPRSA-LSNDKLLLKELENLEHLENLSITISSVLLLEDLLGMTRLRSLLQSLSIEG-----CSKRT 708 (889)
T ss_pred cchhhhcccccEEEeeccc-cccchhhHHhhhcccchhhheeecchhHhHhhhhhhHHHHHHhHhhhhcc-----cccce
Confidence 7778889999999998765 22222335666677777555554433322233333333320 111111 12223
Q ss_pred hhcccCCCCCCCeEEEEeecCCCCCCchhhhhHHhhhccCC---CCCCcceEEEEeeCCCCCCcccCCCCcCCeeEEEEe
Q 002284 229 MEAQLDGKKNLKVLMLEWTRSTNGLSSREAQTEKGVLDMLK---PHRSLEQFCISGFGGKKFPTWLGYSLFSNLVTLKFQ 305 (943)
Q Consensus 229 ~~~~l~~~~~L~~L~l~~n~~~~~~~~~~~~~~~~~l~~l~---~~~~L~~L~l~~~~~~~~p~~~~~~~l~~L~~L~L~ 305 (943)
....+..+.+|+.|.+....+..... ....... .++++..+.+.++.....+.|... .++|+.|.+.
T Consensus 709 ~~~~~~~l~~L~~L~i~~~~~~e~~~--------~~~~~~~~~~~f~~l~~~~~~~~~~~r~l~~~~f--~~~L~~l~l~ 778 (889)
T KOG4658|consen 709 LISSLGSLGNLEELSILDCGISEIVI--------EWEESLIVLLCFPNLSKVSILNCHMLRDLTWLLF--APHLTSLSLV 778 (889)
T ss_pred eecccccccCcceEEEEcCCCchhhc--------ccccccchhhhHHHHHHHHhhccccccccchhhc--cCcccEEEEe
Confidence 34446677788888887666532111 0000000 122344444445555555666532 6777777777
Q ss_pred CCCCCCCC-CCCCCCCCCCe
Q 002284 306 DCSMCTSM-PSVGQLPSLKH 324 (943)
Q Consensus 306 ~n~~~~~~-~~~~~l~~L~~ 324 (943)
.|...+.+ |....+..++.
T Consensus 779 ~~~~~e~~i~~~k~~~~l~~ 798 (889)
T KOG4658|consen 779 SCRLLEDIIPKLKALLELKE 798 (889)
T ss_pred cccccccCCCHHHHhhhccc
Confidence 77664433 34444444444
No 14
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.75 E-value=2e-20 Score=185.49 Aligned_cols=110 Identities=29% Similarity=0.356 Sum_probs=61.4
Q ss_pred hhccchhhh-ccCcccEEEecCcccccc-CccccCCCCCceeecCC-Ccccccc-hhhhhccccceeecCCCcccccccH
Q 002284 78 ARSILPRLL-KLQRLRVFSLRGYLISEV-PDSIGDLSYLRYLNLSG-TQIRTLP-ESVNKLYNLHTLLLEGCRELKKKCA 153 (943)
Q Consensus 78 ~~~~~~~~~-~l~~L~~L~L~~n~i~~l-p~~~~~l~~L~~L~Ls~-n~i~~lp-~~i~~L~~L~~L~L~~n~~~~~~p~ 153 (943)
...+|+..| .+++||.|||++|.|+.| |++|.+++.|-.|-+.+ |+|+.+| ..|++|..|+.|.+.-|...-...+
T Consensus 79 I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~slqrLllNan~i~Cir~~ 158 (498)
T KOG4237|consen 79 ISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFGGLSSLQRLLLNANHINCIRQD 158 (498)
T ss_pred cccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhhhHHHHHHHhcChhhhcchhHH
Confidence 345555555 566666666666666655 55666666555555544 5566665 3556666666666655543333344
Q ss_pred HHhccccCceEEcCCCCCCcccccc-cccccccccc
Q 002284 154 DMGNLIKLHHLNNSNTDSLEEMPLG-IGKLTCLLTL 188 (943)
Q Consensus 154 ~~~~L~~L~~L~l~~n~~~~~~p~~-~~~L~~L~~L 188 (943)
.|..|++|..|.+.+|. +..++.+ |..+..++++
T Consensus 159 al~dL~~l~lLslyDn~-~q~i~~~tf~~l~~i~tl 193 (498)
T KOG4237|consen 159 ALRDLPSLSLLSLYDNK-IQSICKGTFQGLAAIKTL 193 (498)
T ss_pred HHHHhhhcchhcccchh-hhhhccccccchhccchH
Confidence 46666666666666655 5555542 5555555554
No 15
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.70 E-value=7.3e-19 Score=174.54 Aligned_cols=89 Identities=19% Similarity=0.192 Sum_probs=59.3
Q ss_pred cCccceeceEEEecCCCcCccchhccCCCCcCeeeccCCCCCcccCCCCC--CCCccEEEEecCCCCCcCccccccCCCC
Q 002284 512 FGLSFRLEHLELINCQDLEKLPKSLLSLSSLTEMRIHNCSSLVSFPEAVL--PSQLRVISIWDSGALKFLPEAWMLDNNS 589 (943)
Q Consensus 512 ~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~L~~n~~l~~~~~~~~--~~~L~~L~l~~~~~l~~~~~~~~~~~l~ 589 (943)
|..+++|++|++++|++.++-+.+|.++..+++|+|..|+ +..+....+ +..|++|++.+|++....|.. +..+.
T Consensus 270 f~~L~~L~~lnlsnN~i~~i~~~aFe~~a~l~eL~L~~N~-l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~a--F~~~~ 346 (498)
T KOG4237|consen 270 FKKLPNLRKLNLSNNKITRIEDGAFEGAAELQELYLTRNK-LEFVSSGMFQGLSGLKTLSLYDNQITTVAPGA--FQTLF 346 (498)
T ss_pred HhhcccceEeccCCCccchhhhhhhcchhhhhhhhcCcch-HHHHHHHhhhccccceeeeecCCeeEEEeccc--ccccc
Confidence 6667777777777776666666677777777777777774 444444333 566777777777755555555 34677
Q ss_pred CccEEEeecCCCcc
Q 002284 590 SLEILDIRHCHLLT 603 (943)
Q Consensus 590 ~L~~L~l~~n~~~~ 603 (943)
+|.+|.+-.|++.-
T Consensus 347 ~l~~l~l~~Np~~C 360 (498)
T KOG4237|consen 347 SLSTLNLLSNPFNC 360 (498)
T ss_pred eeeeeehccCcccC
Confidence 78888888777643
No 16
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.63 E-value=2.1e-15 Score=172.26 Aligned_cols=79 Identities=19% Similarity=0.223 Sum_probs=58.9
Q ss_pred CcccEEEecCccccccCccccCCCCCceeecCCCcccccchhhhhccccceeecCCCcccccccHHHhccccCceEEcCC
Q 002284 89 QRLRVFSLRGYLISEVPDSIGDLSYLRYLNLSGTQIRTLPESVNKLYNLHTLLLEGCRELKKKCADMGNLIKLHHLNNSN 168 (943)
Q Consensus 89 ~~L~~L~L~~n~i~~lp~~~~~l~~L~~L~Ls~n~i~~lp~~i~~L~~L~~L~L~~n~~~~~~p~~~~~L~~L~~L~l~~ 168 (943)
..-.+|+++.+.++.+|..+. .+|+.|++++|+++.+|.. +++|++|++++|. +..+|.. .++|+.|++++
T Consensus 201 ~~~~~LdLs~~~LtsLP~~l~--~~L~~L~L~~N~Lt~LP~l---p~~Lk~LdLs~N~-LtsLP~l---p~sL~~L~Ls~ 271 (788)
T PRK15387 201 NGNAVLNVGESGLTTLPDCLP--AHITTLVIPDNNLTSLPAL---PPELRTLEVSGNQ-LTSLPVL---PPGLLELSIFS 271 (788)
T ss_pred CCCcEEEcCCCCCCcCCcchh--cCCCEEEccCCcCCCCCCC---CCCCcEEEecCCc-cCcccCc---ccccceeeccC
Confidence 446688999998888888775 4788999999998888853 5788888888875 5556642 35778888888
Q ss_pred CCCCccccc
Q 002284 169 TDSLEEMPL 177 (943)
Q Consensus 169 n~~~~~~p~ 177 (943)
|. +..+|.
T Consensus 272 N~-L~~Lp~ 279 (788)
T PRK15387 272 NP-LTHLPA 279 (788)
T ss_pred Cc-hhhhhh
Confidence 87 555543
No 17
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.62 E-value=2.5e-15 Score=171.57 Aligned_cols=97 Identities=25% Similarity=0.265 Sum_probs=56.4
Q ss_pred ccccEEEeecCCCchhhHhhhcccccccEEEeeccCCcccccccccCCCCccEEeccCCCCCcccCcCCccccccceeee
Q 002284 678 QALKFLSIWHCSKLESIVERLDNKISLEVIEIVSCENLKMLPHGLHKLWHLQEIDIQDCENLVSFPEGGLLSAKLKRLVI 757 (943)
Q Consensus 678 ~~L~~L~l~~~~~l~~~~~~~~~l~~L~~L~l~~~~~~~~~p~~~~~l~~L~~L~l~~~~~l~~~p~~~~~l~~L~~L~l 757 (943)
.+|+.|++++|. +..+|.. ..+|+.|++++|.+.+ +|.. .++|+.|++++|. +..+|.. ..+|+.|++
T Consensus 362 ~~L~~L~Ls~N~-L~~LP~l---~~~L~~LdLs~N~Lt~-LP~l---~s~L~~LdLS~N~-LssIP~l---~~~L~~L~L 429 (788)
T PRK15387 362 SELYKLWAYNNR-LTSLPAL---PSGLKELIVSGNRLTS-LPVL---PSELKELMVSGNR-LTSLPML---PSGLLSLSV 429 (788)
T ss_pred cccceehhhccc-cccCccc---ccccceEEecCCcccC-CCCc---ccCCCEEEccCCc-CCCCCcc---hhhhhhhhh
Confidence 445555555543 3334432 2356666666665443 4432 3467777777773 4556642 235667777
Q ss_pred ccccCCccCCCcCCCCCCCCceeecCCCCC
Q 002284 758 YGCKKLEALPEGMHNLSSLQYLTIGGVPSL 787 (943)
Q Consensus 758 ~~~~~l~~~p~~~~~l~~L~~L~l~~~~~l 787 (943)
++|+ ++.+|..+..+++|+.|++++|+.-
T Consensus 430 s~Nq-Lt~LP~sl~~L~~L~~LdLs~N~Ls 458 (788)
T PRK15387 430 YRNQ-LTRLPESLIHLSSETTVNLEGNPLS 458 (788)
T ss_pred ccCc-ccccChHHhhccCCCeEECCCCCCC
Confidence 7766 4566777777777777777777644
No 18
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.59 E-value=1.9e-17 Score=144.90 Aligned_cols=109 Identities=28% Similarity=0.379 Sum_probs=64.4
Q ss_pred hccchhhhccCcccEEEecCccccccCccccCCCCCceeecCCCcccccchhhhhccccceeecCCCccc-ccccHHHhc
Q 002284 79 RSILPRLLKLQRLRVFSLRGYLISEVPDSIGDLSYLRYLNLSGTQIRTLPESVNKLYNLHTLLLEGCREL-KKKCADMGN 157 (943)
Q Consensus 79 ~~~~~~~~~l~~L~~L~L~~n~i~~lp~~~~~l~~L~~L~Ls~n~i~~lp~~i~~L~~L~~L~L~~n~~~-~~~p~~~~~ 157 (943)
..+|+.+..+.+|++|++++|+|..+|.+++.+++||.|+++-|++..+|..|+.++.|++|||++|+.. ..+|..|..
T Consensus 46 ~~vppnia~l~nlevln~~nnqie~lp~~issl~klr~lnvgmnrl~~lprgfgs~p~levldltynnl~e~~lpgnff~ 125 (264)
T KOG0617|consen 46 TVVPPNIAELKNLEVLNLSNNQIEELPTSISSLPKLRILNVGMNRLNILPRGFGSFPALEVLDLTYNNLNENSLPGNFFY 125 (264)
T ss_pred eecCCcHHHhhhhhhhhcccchhhhcChhhhhchhhhheecchhhhhcCccccCCCchhhhhhccccccccccCCcchhH
Confidence 4555666666666666666666666666666666666666666666556666666666666666655433 335555556
Q ss_pred cccCceEEcCCCCCCcccccccccccccccc
Q 002284 158 LIKLHHLNNSNTDSLEEMPLGIGKLTCLLTL 188 (943)
Q Consensus 158 L~~L~~L~l~~n~~~~~~p~~~~~L~~L~~L 188 (943)
++.|+.|++++|. ...+|.+++++++||.|
T Consensus 126 m~tlralyl~dnd-fe~lp~dvg~lt~lqil 155 (264)
T KOG0617|consen 126 MTTLRALYLGDND-FEILPPDVGKLTNLQIL 155 (264)
T ss_pred HHHHHHHHhcCCC-cccCChhhhhhcceeEE
Confidence 6666666666665 55556555555555554
No 19
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.54 E-value=1.1e-16 Score=140.17 Aligned_cols=106 Identities=29% Similarity=0.381 Sum_probs=93.2
Q ss_pred chhhhccCcccEEEecCccccccCccccCCCCCceeecCCCcccccchhhhhccccceeecCCCcccccccHHHhccccC
Q 002284 82 LPRLLKLQRLRVFSLRGYLISEVPDSIGDLSYLRYLNLSGTQIRTLPESVNKLYNLHTLLLEGCRELKKKCADMGNLIKL 161 (943)
Q Consensus 82 ~~~~~~l~~L~~L~L~~n~i~~lp~~~~~l~~L~~L~Ls~n~i~~lp~~i~~L~~L~~L~L~~n~~~~~~p~~~~~L~~L 161 (943)
.+++|++.+.+.|-||+|.++.+|..|..+++|+.|++++|+|+++|.+|+.+++|++|+++-|+ +..+|.+|+.++.|
T Consensus 26 ~~gLf~~s~ITrLtLSHNKl~~vppnia~l~nlevln~~nnqie~lp~~issl~klr~lnvgmnr-l~~lprgfgs~p~l 104 (264)
T KOG0617|consen 26 LPGLFNMSNITRLTLSHNKLTVVPPNIAELKNLEVLNLSNNQIEELPTSISSLPKLRILNVGMNR-LNILPRGFGSFPAL 104 (264)
T ss_pred cccccchhhhhhhhcccCceeecCCcHHHhhhhhhhhcccchhhhcChhhhhchhhhheecchhh-hhcCccccCCCchh
Confidence 45677899999999999999999999999999999999999999999999999999999999985 88999999999999
Q ss_pred ceEEcCCCCCCc-ccccccccccccccc
Q 002284 162 HHLNNSNTDSLE-EMPLGIGKLTCLLTL 188 (943)
Q Consensus 162 ~~L~l~~n~~~~-~~p~~~~~L~~L~~L 188 (943)
+.||+.+|.+.. .+|..|..|+.|+.|
T Consensus 105 evldltynnl~e~~lpgnff~m~tlral 132 (264)
T KOG0617|consen 105 EVLDLTYNNLNENSLPGNFFYMTTLRAL 132 (264)
T ss_pred hhhhccccccccccCCcchhHHHHHHHH
Confidence 999999998433 455556666666555
No 20
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.53 E-value=2e-14 Score=165.58 Aligned_cols=82 Identities=20% Similarity=0.297 Sum_probs=66.1
Q ss_pred CcccEEEecCccccccCccccCCCCCceeecCCCcccccchhhhhccccceeecCCCcccccccHHHhccccCceEEcCC
Q 002284 89 QRLRVFSLRGYLISEVPDSIGDLSYLRYLNLSGTQIRTLPESVNKLYNLHTLLLEGCRELKKKCADMGNLIKLHHLNNSN 168 (943)
Q Consensus 89 ~~L~~L~L~~n~i~~lp~~~~~l~~L~~L~Ls~n~i~~lp~~i~~L~~L~~L~L~~n~~~~~~p~~~~~L~~L~~L~l~~ 168 (943)
.+...|+++++.++.+|..+. ++|+.|+|++|+|+.+|..+. .+|++|++++|. +..+|..+. .+|+.|++++
T Consensus 178 ~~~~~L~L~~~~LtsLP~~Ip--~~L~~L~Ls~N~LtsLP~~l~--~nL~~L~Ls~N~-LtsLP~~l~--~~L~~L~Ls~ 250 (754)
T PRK15370 178 NNKTELRLKILGLTTIPACIP--EQITTLILDNNELKSLPENLQ--GNIKTLYANSNQ-LTSIPATLP--DTIQEMELSI 250 (754)
T ss_pred cCceEEEeCCCCcCcCCcccc--cCCcEEEecCCCCCcCChhhc--cCCCEEECCCCc-cccCChhhh--ccccEEECcC
Confidence 557889999999999988775 589999999999999987664 589999999986 567787664 4789999999
Q ss_pred CCCCcccccc
Q 002284 169 TDSLEEMPLG 178 (943)
Q Consensus 169 n~~~~~~p~~ 178 (943)
|. +..+|..
T Consensus 251 N~-L~~LP~~ 259 (754)
T PRK15370 251 NR-ITELPER 259 (754)
T ss_pred Cc-cCcCChh
Confidence 88 5566643
No 21
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.52 E-value=3.9e-14 Score=163.31 Aligned_cols=97 Identities=13% Similarity=0.244 Sum_probs=77.2
Q ss_pred ccchhhhccCcccEEEecCccccccCccccCCCCCceeecCCCcccccchhhhhccccceeecCCCcccccccHHHhccc
Q 002284 80 SILPRLLKLQRLRVFSLRGYLISEVPDSIGDLSYLRYLNLSGTQIRTLPESVNKLYNLHTLLLEGCRELKKKCADMGNLI 159 (943)
Q Consensus 80 ~~~~~~~~l~~L~~L~L~~n~i~~lp~~~~~l~~L~~L~Ls~n~i~~lp~~i~~L~~L~~L~L~~n~~~~~~p~~~~~L~ 159 (943)
.+|..+. +.|+.|+|++|.++.+|..+. .+|++|++++|+++.+|..+. .+|+.|++++|. +..+|..+. .
T Consensus 192 sLP~~Ip--~~L~~L~Ls~N~LtsLP~~l~--~nL~~L~Ls~N~LtsLP~~l~--~~L~~L~Ls~N~-L~~LP~~l~--s 262 (754)
T PRK15370 192 TIPACIP--EQITTLILDNNELKSLPENLQ--GNIKTLYANSNQLTSIPATLP--DTIQEMELSINR-ITELPERLP--S 262 (754)
T ss_pred cCCcccc--cCCcEEEecCCCCCcCChhhc--cCCCEEECCCCccccCChhhh--ccccEEECcCCc-cCcCChhHh--C
Confidence 4565553 579999999999999998765 589999999999999997664 489999999996 568888775 5
Q ss_pred cCceEEcCCCCCCcccccccccccccccc
Q 002284 160 KLHHLNNSNTDSLEEMPLGIGKLTCLLTL 188 (943)
Q Consensus 160 ~L~~L~l~~n~~~~~~p~~~~~L~~L~~L 188 (943)
+|+.|++++|. +..+|..+. .+|+.|
T Consensus 263 ~L~~L~Ls~N~-L~~LP~~l~--~sL~~L 288 (754)
T PRK15370 263 ALQSLDLFHNK-ISCLPENLP--EELRYL 288 (754)
T ss_pred CCCEEECcCCc-cCccccccC--CCCcEE
Confidence 89999999998 667776543 244444
No 22
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=99.38 E-value=6.8e-13 Score=155.55 Aligned_cols=132 Identities=26% Similarity=0.270 Sum_probs=104.1
Q ss_pred cccccccccEEeecccCCCCCCcchhccchhhhccCcccEEEecCcc--ccccCc-cccCCCCCceeecCCC-cccccch
Q 002284 54 DLYDIQHLRTLLPVTLLSSRPGYLARSILPRLLKLQRLRVFSLRGYL--ISEVPD-SIGDLSYLRYLNLSGT-QIRTLPE 129 (943)
Q Consensus 54 ~~~~~~~Lr~L~~~~~~~l~~~~~~~~~~~~~~~l~~L~~L~L~~n~--i~~lp~-~~~~l~~L~~L~Ls~n-~i~~lp~ 129 (943)
...+....|...+..+. ...++. -...+.|++|-+.+|. +..++. .|..++.||+|||++| .+.++|+
T Consensus 518 ~~~~~~~~rr~s~~~~~-------~~~~~~-~~~~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~ 589 (889)
T KOG4658|consen 518 QVKSWNSVRRMSLMNNK-------IEHIAG-SSENPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPS 589 (889)
T ss_pred cccchhheeEEEEeccc-------hhhccC-CCCCCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCCh
Confidence 34455677877776543 122222 2245589999999996 677754 4788999999999988 6889999
Q ss_pred hhhhccccceeecCCCcccccccHHHhccccCceEEcCCCCCCccccccccccccccccCceEec
Q 002284 130 SVNKLYNLHTLLLEGCRELKKKCADMGNLIKLHHLNNSNTDSLEEMPLGIGKLTCLLTLCNFVVG 194 (943)
Q Consensus 130 ~i~~L~~L~~L~L~~n~~~~~~p~~~~~L~~L~~L~l~~n~~~~~~p~~~~~L~~L~~L~~~~~~ 194 (943)
.|+.|.+||+|++++.. +..+|.++++|++|.+|++..+.....+|.....|++||+|..+...
T Consensus 590 ~I~~Li~LryL~L~~t~-I~~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~ 653 (889)
T KOG4658|consen 590 SIGELVHLRYLDLSDTG-ISHLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRSA 653 (889)
T ss_pred HHhhhhhhhcccccCCC-ccccchHHHHHHhhheeccccccccccccchhhhcccccEEEeeccc
Confidence 99999999999999974 88999999999999999999988666666667779999999665554
No 23
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.23 E-value=1.7e-12 Score=140.03 Aligned_cols=40 Identities=23% Similarity=0.117 Sum_probs=22.3
Q ss_pred cCccceeceEEEecCCCcC----ccchhccCCCCcCeeeccCCC
Q 002284 512 FGLSFRLEHLELINCQDLE----KLPKSLLSLSSLTEMRIHNCS 551 (943)
Q Consensus 512 ~~~l~~L~~L~l~~~~~~~----~~~~~~~~l~~L~~L~L~~n~ 551 (943)
+..+.+|+.|++++|.... .++..+...+.|++++++++.
T Consensus 19 ~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~ 62 (319)
T cd00116 19 LPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNE 62 (319)
T ss_pred HHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccc
Confidence 4455556666666665422 234445555666666666654
No 24
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.16 E-value=4.7e-12 Score=136.53 Aligned_cols=89 Identities=16% Similarity=0.072 Sum_probs=52.2
Q ss_pred chhhhccCcccEEEecCccccc-------cCccccCCCCCceeecCCCcccc-cchhhhhccc---cceeecCCCcccc-
Q 002284 82 LPRLLKLQRLRVFSLRGYLISE-------VPDSIGDLSYLRYLNLSGTQIRT-LPESVNKLYN---LHTLLLEGCRELK- 149 (943)
Q Consensus 82 ~~~~~~l~~L~~L~L~~n~i~~-------lp~~~~~l~~L~~L~Ls~n~i~~-lp~~i~~L~~---L~~L~L~~n~~~~- 149 (943)
+..+...+.++.|+++++.+.. ++..+..+++|++|++++|.+.. .+..+..+.+ |++|++++|....
T Consensus 44 ~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~ 123 (319)
T cd00116 44 ASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGCGLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDR 123 (319)
T ss_pred HHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcCceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchH
Confidence 3333456667777777665542 23455566677777777776653 3445555554 7777777765431
Q ss_pred ---cccHHHhcc-ccCceEEcCCCC
Q 002284 150 ---KKCADMGNL-IKLHHLNNSNTD 170 (943)
Q Consensus 150 ---~~p~~~~~L-~~L~~L~l~~n~ 170 (943)
.+...+..+ ++|+.|++++|.
T Consensus 124 ~~~~l~~~l~~~~~~L~~L~L~~n~ 148 (319)
T cd00116 124 GLRLLAKGLKDLPPALEKLVLGRNR 148 (319)
T ss_pred HHHHHHHHHHhCCCCceEEEcCCCc
Confidence 223345555 677777777776
No 25
>KOG4341 consensus F-box protein containing LRR [General function prediction only]
Probab=98.99 E-value=1.5e-11 Score=124.35 Aligned_cols=290 Identities=17% Similarity=0.210 Sum_probs=153.6
Q ss_pred CCccEEEEecCCCCCcCccccccCCCCCccEEEeecCCCcccccC---cCCCCCCceEEeccCcCccccccccCcccccc
Q 002284 563 SQLRVISIWDSGALKFLPEAWMLDNNSSLEILDIRHCHLLTYIAG---VQLPPSLKQLEIYNCDNLRTLTAEEGIHSSRR 639 (943)
Q Consensus 563 ~~L~~L~l~~~~~l~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~---~~~~~~L~~L~l~~~~~L~~l~~~~~~~~~~~ 639 (943)
..|+.|.+.+|...+.-+..-...++|+++.|.+.+|..++...- ..+.+.|+.+++..|..+++.... ....
T Consensus 138 g~lk~LSlrG~r~v~~sslrt~~~~CpnIehL~l~gc~~iTd~s~~sla~~C~~l~~l~L~~c~~iT~~~Lk----~la~ 213 (483)
T KOG4341|consen 138 GFLKELSLRGCRAVGDSSLRTFASNCPNIEHLALYGCKKITDSSLLSLARYCRKLRHLNLHSCSSITDVSLK----YLAE 213 (483)
T ss_pred cccccccccccccCCcchhhHHhhhCCchhhhhhhcceeccHHHHHHHHHhcchhhhhhhcccchhHHHHHH----HHHH
Confidence 347778888887665544333345677777777777765543221 134455555555555554443211 0112
Q ss_pred cCCccceeeeecCCCcccccchhhHHHHhhhhhcCCCcccccEEEeecCCCchhhHhhhcccccccEEEeeccCCcccc-
Q 002284 640 HTSLLECLEIHSCPSLTCLISKNELRAALDYLVVGNLPQALKFLSIWHCSKLESIVERLDNKISLEVIEIVSCENLKML- 718 (943)
Q Consensus 640 ~~~~L~~L~i~~c~~l~~~~~~~~~~~~~~~~~~~~lp~~L~~L~l~~~~~l~~~~~~~~~l~~L~~L~l~~~~~~~~~- 718 (943)
.+++|++++++.|+.++. + .+-....++..++.+.+.+|...+.-
T Consensus 214 gC~kL~~lNlSwc~qi~~----~------------------------------gv~~~~rG~~~l~~~~~kGC~e~~le~ 259 (483)
T KOG4341|consen 214 GCRKLKYLNLSWCPQISG----N------------------------------GVQALQRGCKELEKLSLKGCLELELEA 259 (483)
T ss_pred hhhhHHHhhhccCchhhc----C------------------------------cchHHhccchhhhhhhhcccccccHHH
Confidence 344444444444443322 0 12222344444444444444333210
Q ss_pred -cccccCCCCccEEeccCCCCCcccCc--CCccccccceeeeccccCCccCCC-cC-CCCCCCCceeecCCCCCccccCC
Q 002284 719 -PHGLHKLWHLQEIDIQDCENLVSFPE--GGLLSAKLKRLVIYGCKKLEALPE-GM-HNLSSLQYLTIGGVPSLLCFTED 793 (943)
Q Consensus 719 -p~~~~~l~~L~~L~l~~~~~l~~~p~--~~~~l~~L~~L~l~~~~~l~~~p~-~~-~~l~~L~~L~l~~~~~l~~~~~~ 793 (943)
-..-....-+.++++.+|..++...- ....+..|+.|+.++|...+..+- .+ .+.++|+.|.+++|..++...-.
T Consensus 260 l~~~~~~~~~i~~lnl~~c~~lTD~~~~~i~~~c~~lq~l~~s~~t~~~d~~l~aLg~~~~~L~~l~l~~c~~fsd~~ft 339 (483)
T KOG4341|consen 260 LLKAAAYCLEILKLNLQHCNQLTDEDLWLIACGCHALQVLCYSSCTDITDEVLWALGQHCHNLQVLELSGCQQFSDRGFT 339 (483)
T ss_pred HHHHhccChHhhccchhhhccccchHHHHHhhhhhHhhhhcccCCCCCchHHHHHHhcCCCceEEEeccccchhhhhhhh
Confidence 01112344455556666644443321 122355667777777665443321 11 45567777777777764433211
Q ss_pred --CCCCCCcceEEecCCcchhccccccCCCCCCCccEEEecCCCCcCcccCccccccc---CCCCCCccEEEeecCCCCc
Q 002284 794 --GLFPTNLHSLEIDGMKIWKSLMQLGGFHRYTSLRRLAISGCDEDMVSFPLEDIRLG---TTLPACLTQLEIFNFPNLE 868 (943)
Q Consensus 794 --~~~~~~L~~L~l~~c~~l~~~~~~~~~~~l~~L~~L~l~~c~~~~~~~~~~~~~~~---~~~~~~L~~L~l~~~~~l~ 868 (943)
....+.|+.+++.+|....+....+...+++.|++|.+++| +.+.++++... ......|+.+.+.+||.++
T Consensus 340 ~l~rn~~~Le~l~~e~~~~~~d~tL~sls~~C~~lr~lslshc----e~itD~gi~~l~~~~c~~~~l~~lEL~n~p~i~ 415 (483)
T KOG4341|consen 340 MLGRNCPHLERLDLEECGLITDGTLASLSRNCPRLRVLSLSHC----ELITDEGIRHLSSSSCSLEGLEVLELDNCPLIT 415 (483)
T ss_pred hhhcCChhhhhhcccccceehhhhHhhhccCCchhccCChhhh----hhhhhhhhhhhhhccccccccceeeecCCCCch
Confidence 12236777888888877766544445667888888888887 45555543221 1345667777777777765
Q ss_pred ccc--cccCCCCCCeEeecCCCCCccCC
Q 002284 869 RLS--SSICDQNLTSLKLTNCPKLKYFP 894 (943)
Q Consensus 869 ~l~--~~~~~~~L~~L~l~~C~~L~~~~ 894 (943)
.-- ....+++|+.+++.+|.....-+
T Consensus 416 d~~Le~l~~c~~Leri~l~~~q~vtk~~ 443 (483)
T KOG4341|consen 416 DATLEHLSICRNLERIELIDCQDVTKEA 443 (483)
T ss_pred HHHHHHHhhCcccceeeeechhhhhhhh
Confidence 432 11256777777777776665543
No 26
>KOG4341 consensus F-box protein containing LRR [General function prediction only]
Probab=98.98 E-value=1.7e-11 Score=124.02 Aligned_cols=178 Identities=17% Similarity=0.182 Sum_probs=89.8
Q ss_pred ccEEEeecCCCch--hhHhhhcccccccEEEeeccCCccccc--ccccCCCCccEEeccCCCCCcccCcC--Cccccccc
Q 002284 680 LKFLSIWHCSKLE--SIVERLDNKISLEVIEIVSCENLKMLP--HGLHKLWHLQEIDIQDCENLVSFPEG--GLLSAKLK 753 (943)
Q Consensus 680 L~~L~l~~~~~l~--~~~~~~~~l~~L~~L~l~~~~~~~~~p--~~~~~l~~L~~L~l~~~~~l~~~p~~--~~~l~~L~ 753 (943)
+.++++.+|..++ .++..-.++.+|++|+.++|...+..+ .--.+.++|+.|.++.|+..+..-.. ..+++.|+
T Consensus 270 i~~lnl~~c~~lTD~~~~~i~~~c~~lq~l~~s~~t~~~d~~l~aLg~~~~~L~~l~l~~c~~fsd~~ft~l~rn~~~Le 349 (483)
T KOG4341|consen 270 ILKLNLQHCNQLTDEDLWLIACGCHALQVLCYSSCTDITDEVLWALGQHCHNLQVLELSGCQQFSDRGFTMLGRNCPHLE 349 (483)
T ss_pred hhccchhhhccccchHHHHHhhhhhHhhhhcccCCCCCchHHHHHHhcCCCceEEEeccccchhhhhhhhhhhcCChhhh
Confidence 3444444554443 223334455556666666655543322 11134556666666666544332211 22355666
Q ss_pred eeeeccccCCccC--CCcCCCCCCCCceeecCCCCCccc-----cCCCCCCCCcceEEecCCcchhccccccCCCCCCCc
Q 002284 754 RLVIYGCKKLEAL--PEGMHNLSSLQYLTIGGVPSLLCF-----TEDGLFPTNLHSLEIDGMKIWKSLMQLGGFHRYTSL 826 (943)
Q Consensus 754 ~L~l~~~~~l~~~--p~~~~~l~~L~~L~l~~~~~l~~~-----~~~~~~~~~L~~L~l~~c~~l~~~~~~~~~~~l~~L 826 (943)
.+++.+|...... -.--.+++.|+.|.++.|..+++- .........|..+.+++|+.+.+... ..+..+++|
T Consensus 350 ~l~~e~~~~~~d~tL~sls~~C~~lr~lslshce~itD~gi~~l~~~~c~~~~l~~lEL~n~p~i~d~~L-e~l~~c~~L 428 (483)
T KOG4341|consen 350 RLDLEECGLITDGTLASLSRNCPRLRVLSLSHCELITDEGIRHLSSSSCSLEGLEVLELDNCPLITDATL-EHLSICRNL 428 (483)
T ss_pred hhcccccceehhhhHhhhccCCchhccCChhhhhhhhhhhhhhhhhccccccccceeeecCCCCchHHHH-HHHhhCccc
Confidence 6666665532211 111145666666666666655433 22223346677777777777665432 245667777
Q ss_pred cEEEecCCCCcCcccCcccccccCCCCCCccEEEee
Q 002284 827 RRLAISGCDEDMVSFPLEDIRLGTTLPACLTQLEIF 862 (943)
Q Consensus 827 ~~L~l~~c~~~~~~~~~~~~~~~~~~~~~L~~L~l~ 862 (943)
|.+++-+| ..+..+.+......+|+++...+.
T Consensus 429 eri~l~~~----q~vtk~~i~~~~~~lp~i~v~a~~ 460 (483)
T KOG4341|consen 429 ERIELIDC----QDVTKEAISRFATHLPNIKVHAYF 460 (483)
T ss_pred ceeeeech----hhhhhhhhHHHHhhCccceehhhc
Confidence 77777776 333444433333455555554443
No 27
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=98.88 E-value=1.6e-09 Score=101.29 Aligned_cols=131 Identities=24% Similarity=0.250 Sum_probs=55.2
Q ss_pred cccccccccEEeecccCCCCCCcchhccchhhh-ccCcccEEEecCccccccCccccCCCCCceeecCCCcccccchhh-
Q 002284 54 DLYDIQHLRTLLPVTLLSSRPGYLARSILPRLL-KLQRLRVFSLRGYLISEVPDSIGDLSYLRYLNLSGTQIRTLPESV- 131 (943)
Q Consensus 54 ~~~~~~~Lr~L~~~~~~~l~~~~~~~~~~~~~~-~l~~L~~L~L~~n~i~~lp~~~~~l~~L~~L~Ls~n~i~~lp~~i- 131 (943)
.+.+..++|.|.+.++ .+ .. ...+. .+.+|++|||++|.|+.++ .+..+++|++|++++|+|+.+++.+
T Consensus 14 ~~~n~~~~~~L~L~~n------~I-~~-Ie~L~~~l~~L~~L~Ls~N~I~~l~-~l~~L~~L~~L~L~~N~I~~i~~~l~ 84 (175)
T PF14580_consen 14 QYNNPVKLRELNLRGN------QI-ST-IENLGATLDKLEVLDLSNNQITKLE-GLPGLPRLKTLDLSNNRISSISEGLD 84 (175)
T ss_dssp ------------------------------S--TT-TT--EEE-TTS--S--T-T----TT--EEE--SS---S-CHHHH
T ss_pred cccccccccccccccc------cc-cc-ccchhhhhcCCCEEECCCCCCcccc-CccChhhhhhcccCCCCCCccccchH
Confidence 3445567788866544 22 22 24555 6889999999999999985 5888999999999999999997666
Q ss_pred hhccccceeecCCCcccccc-cHHHhccccCceEEcCCCCCCccccc----cccccccccccCceEec
Q 002284 132 NKLYNLHTLLLEGCRELKKK-CADMGNLIKLHHLNNSNTDSLEEMPL----GIGKLTCLLTLCNFVVG 194 (943)
Q Consensus 132 ~~L~~L~~L~L~~n~~~~~~-p~~~~~L~~L~~L~l~~n~~~~~~p~----~~~~L~~L~~L~~~~~~ 194 (943)
..+++|++|++++|.+...- -..++.+++|++|++.+|. +...+. -+..+++|+.|+...+.
T Consensus 85 ~~lp~L~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NP-v~~~~~YR~~vi~~lP~Lk~LD~~~V~ 151 (175)
T PF14580_consen 85 KNLPNLQELYLSNNKISDLNELEPLSSLPKLRVLSLEGNP-VCEKKNYRLFVIYKLPSLKVLDGQDVT 151 (175)
T ss_dssp HH-TT--EEE-TTS---SCCCCGGGGG-TT--EEE-TT-G-GGGSTTHHHHHHHH-TT-SEETTEETT
T ss_pred HhCCcCCEEECcCCcCCChHHhHHHHcCCCcceeeccCCc-ccchhhHHHHHHHHcChhheeCCEEcc
Confidence 47899999999999743211 1457889999999999998 554443 37788999988765554
No 28
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=98.79 E-value=3.2e-10 Score=119.21 Aligned_cols=99 Identities=30% Similarity=0.315 Sum_probs=55.4
Q ss_pred ccCcccEEEecCccccccCccccCCCCCceeecCCCcccccchhhhhccccceeecCCCcccccccHHHhccccCceEEc
Q 002284 87 KLQRLRVFSLRGYLISEVPDSIGDLSYLRYLNLSGTQIRTLPESVNKLYNLHTLLLEGCRELKKKCADMGNLIKLHHLNN 166 (943)
Q Consensus 87 ~l~~L~~L~L~~n~i~~lp~~~~~l~~L~~L~Ls~n~i~~lp~~i~~L~~L~~L~L~~n~~~~~~p~~~~~L~~L~~L~l 166 (943)
.+.--...||+.|++..+|..++.+..|+.|.|..|.|..||+.+++|..|.+|||+.|. +..+|..+..|+ |+.|-+
T Consensus 73 ~ltdt~~aDlsrNR~~elp~~~~~f~~Le~liLy~n~~r~ip~~i~~L~~lt~l~ls~Nq-lS~lp~~lC~lp-Lkvli~ 150 (722)
T KOG0532|consen 73 DLTDTVFADLSRNRFSELPEEACAFVSLESLILYHNCIRTIPEAICNLEALTFLDLSSNQ-LSHLPDGLCDLP-LKVLIV 150 (722)
T ss_pred cccchhhhhccccccccCchHHHHHHHHHHHHHHhccceecchhhhhhhHHHHhhhccch-hhcCChhhhcCc-ceeEEE
Confidence 344444555555555555555555555555666666555555555666666666665553 455555555543 555555
Q ss_pred CCCCCCcccccccccccccccc
Q 002284 167 SNTDSLEEMPLGIGKLTCLLTL 188 (943)
Q Consensus 167 ~~n~~~~~~p~~~~~L~~L~~L 188 (943)
++|+ ++.+|.+++.+..|..|
T Consensus 151 sNNk-l~~lp~~ig~~~tl~~l 171 (722)
T KOG0532|consen 151 SNNK-LTSLPEEIGLLPTLAHL 171 (722)
T ss_pred ecCc-cccCCcccccchhHHHh
Confidence 5555 55555555554555544
No 29
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=98.79 E-value=5.1e-09 Score=116.14 Aligned_cols=103 Identities=32% Similarity=0.434 Sum_probs=82.7
Q ss_pred hhhccCcccEEEecCccccccCccccCCC-CCceeecCCCcccccchhhhhccccceeecCCCcccccccHHHhccccCc
Q 002284 84 RLLKLQRLRVFSLRGYLISEVPDSIGDLS-YLRYLNLSGTQIRTLPESVNKLYNLHTLLLEGCRELKKKCADMGNLIKLH 162 (943)
Q Consensus 84 ~~~~l~~L~~L~L~~n~i~~lp~~~~~l~-~L~~L~Ls~n~i~~lp~~i~~L~~L~~L~L~~n~~~~~~p~~~~~L~~L~ 162 (943)
.+..++.++.|++.+|.+..+|.....+. +|++|++++|.+..+|..++.+++|+.|++++|. +..+|...+.+++|+
T Consensus 111 ~~~~~~~l~~L~l~~n~i~~i~~~~~~~~~nL~~L~l~~N~i~~l~~~~~~l~~L~~L~l~~N~-l~~l~~~~~~~~~L~ 189 (394)
T COG4886 111 ELLELTNLTSLDLDNNNITDIPPLIGLLKSNLKELDLSDNKIESLPSPLRNLPNLKNLDLSFND-LSDLPKLLSNLSNLN 189 (394)
T ss_pred hhhcccceeEEecCCcccccCccccccchhhcccccccccchhhhhhhhhccccccccccCCch-hhhhhhhhhhhhhhh
Confidence 33466788888888888888887777775 8888888888888888888888888888888885 677777777888888
Q ss_pred eEEcCCCCCCcccccccccccccccc
Q 002284 163 HLNNSNTDSLEEMPLGIGKLTCLLTL 188 (943)
Q Consensus 163 ~L~l~~n~~~~~~p~~~~~L~~L~~L 188 (943)
.|++++|. +..+|..++.+..|++|
T Consensus 190 ~L~ls~N~-i~~l~~~~~~~~~L~~l 214 (394)
T COG4886 190 NLDLSGNK-ISDLPPEIELLSALEEL 214 (394)
T ss_pred heeccCCc-cccCchhhhhhhhhhhh
Confidence 88888888 77887766666666666
No 30
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=98.76 E-value=1.6e-09 Score=110.55 Aligned_cols=131 Identities=21% Similarity=0.196 Sum_probs=79.7
Q ss_pred cccccCeEEeecCCCcccchhhhhhhcCccceeceEEEecCCCcCccchhccCCCCcCeeeccCCCCCccc--CCCCCCC
Q 002284 486 DIATLKRLKIERCPKLQFLEEEDQWQFGLSFRLEHLELINCQDLEKLPKSLLSLSSLTEMRIHNCSSLVSF--PEAVLPS 563 (943)
Q Consensus 486 ~l~~L~~L~l~~~~~l~~l~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~L~~n~~l~~~--~~~~~~~ 563 (943)
.+++|+.|.++.|. ++ |....+....+|+|+.|++..|.....-......+..|++|+|++|+.+..- +..+.++
T Consensus 195 ~l~~lK~L~l~~CG-ls--~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~ 271 (505)
T KOG3207|consen 195 LLSHLKQLVLNSCG-LS--WKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFDQGYKVGTLP 271 (505)
T ss_pred hhhhhheEEeccCC-CC--HHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCccccccccccccccc
Confidence 56778888888885 44 3333344677888888888888543333334445677888888888755432 2334478
Q ss_pred CccEEEEecCCCCCc-Ccccc---ccCCCCCccEEEeecCCC--cccccCcCCCCCCceEEe
Q 002284 564 QLRVISIWDSGALKF-LPEAW---MLDNNSSLEILDIRHCHL--LTYIAGVQLPPSLKQLEI 619 (943)
Q Consensus 564 ~L~~L~l~~~~~l~~-~~~~~---~~~~l~~L~~L~l~~n~~--~~~~~~~~~~~~L~~L~l 619 (943)
.|..|+++.|.+... .|+.- ....+++|++|++..|++ ..++......++|+.|.+
T Consensus 272 ~L~~Lnls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~w~sl~~l~~l~nlk~l~~ 333 (505)
T KOG3207|consen 272 GLNQLNLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIRDWRSLNHLRTLENLKHLRI 333 (505)
T ss_pred chhhhhccccCcchhcCCCccchhhhcccccceeeecccCccccccccchhhccchhhhhhc
Confidence 888888888774332 12110 013578888888888875 223333334455555544
No 31
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=98.73 E-value=8.8e-09 Score=96.40 Aligned_cols=81 Identities=35% Similarity=0.441 Sum_probs=29.7
Q ss_pred ccCcccEEEecCccccccCcccc-CCCCCceeecCCCcccccchhhhhccccceeecCCCcccccccHHH-hccccCceE
Q 002284 87 KLQRLRVFSLRGYLISEVPDSIG-DLSYLRYLNLSGTQIRTLPESVNKLYNLHTLLLEGCRELKKKCADM-GNLIKLHHL 164 (943)
Q Consensus 87 ~l~~L~~L~L~~n~i~~lp~~~~-~l~~L~~L~Ls~n~i~~lp~~i~~L~~L~~L~L~~n~~~~~~p~~~-~~L~~L~~L 164 (943)
+..++|.|+|++|.|+.+. .++ .+.+|+.|+|++|.|+.++ .+..+++|++|++++|. +..+++.+ ..+++|++|
T Consensus 17 n~~~~~~L~L~~n~I~~Ie-~L~~~l~~L~~L~Ls~N~I~~l~-~l~~L~~L~~L~L~~N~-I~~i~~~l~~~lp~L~~L 93 (175)
T PF14580_consen 17 NPVKLRELNLRGNQISTIE-NLGATLDKLEVLDLSNNQITKLE-GLPGLPRLKTLDLSNNR-ISSISEGLDKNLPNLQEL 93 (175)
T ss_dssp --------------------S--TT-TT--EEE-TTS--S--T-T----TT--EEE--SS----S-CHHHHHH-TT--EE
T ss_pred ccccccccccccccccccc-chhhhhcCCCEEECCCCCCcccc-CccChhhhhhcccCCCC-CCccccchHHhCCcCCEE
Confidence 6678899999999999884 565 6899999999999999994 68899999999999997 55665555 469999999
Q ss_pred EcCCCC
Q 002284 165 NNSNTD 170 (943)
Q Consensus 165 ~l~~n~ 170 (943)
++++|+
T Consensus 94 ~L~~N~ 99 (175)
T PF14580_consen 94 YLSNNK 99 (175)
T ss_dssp E-TTS-
T ss_pred ECcCCc
Confidence 999998
No 32
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=98.71 E-value=6.1e-10 Score=117.13 Aligned_cols=109 Identities=27% Similarity=0.422 Sum_probs=98.8
Q ss_pred hhccchhhhccCcccEEEecCccccccCccccCCCCCceeecCCCcccccchhhhhccccceeecCCCcccccccHHHhc
Q 002284 78 ARSILPRLLKLQRLRVFSLRGYLISEVPDSIGDLSYLRYLNLSGTQIRTLPESVNKLYNLHTLLLEGCRELKKKCADMGN 157 (943)
Q Consensus 78 ~~~~~~~~~~l~~L~~L~L~~n~i~~lp~~~~~l~~L~~L~Ls~n~i~~lp~~i~~L~~L~~L~L~~n~~~~~~p~~~~~ 157 (943)
..++|.++..+..|..+.|.+|.+..+|.+++++..|.||||+.|++..+|..++.|+ |++|-+++|. ++.+|..++.
T Consensus 87 ~~elp~~~~~f~~Le~liLy~n~~r~ip~~i~~L~~lt~l~ls~NqlS~lp~~lC~lp-Lkvli~sNNk-l~~lp~~ig~ 164 (722)
T KOG0532|consen 87 FSELPEEACAFVSLESLILYHNCIRTIPEAICNLEALTFLDLSSNQLSHLPDGLCDLP-LKVLIVSNNK-LTSLPEEIGL 164 (722)
T ss_pred cccCchHHHHHHHHHHHHHHhccceecchhhhhhhHHHHhhhccchhhcCChhhhcCc-ceeEEEecCc-cccCCccccc
Confidence 3577888888999999999999999999999999999999999999999999888876 8999999985 8899999999
Q ss_pred cccCceEEcCCCCCCccccccccccccccccC
Q 002284 158 LIKLHHLNNSNTDSLEEMPLGIGKLTCLLTLC 189 (943)
Q Consensus 158 L~~L~~L~l~~n~~~~~~p~~~~~L~~L~~L~ 189 (943)
+..|.+||.+.|. +..+|..++.+.+|+.|.
T Consensus 165 ~~tl~~ld~s~ne-i~slpsql~~l~slr~l~ 195 (722)
T KOG0532|consen 165 LPTLAHLDVSKNE-IQSLPSQLGYLTSLRDLN 195 (722)
T ss_pred chhHHHhhhhhhh-hhhchHHhhhHHHHHHHH
Confidence 9999999999999 889999999999988883
No 33
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.70 E-value=1.7e-08 Score=77.32 Aligned_cols=58 Identities=29% Similarity=0.495 Sum_probs=43.7
Q ss_pred CcccEEEecCccccccC-ccccCCCCCceeecCCCcccccc-hhhhhccccceeecCCCc
Q 002284 89 QRLRVFSLRGYLISEVP-DSIGDLSYLRYLNLSGTQIRTLP-ESVNKLYNLHTLLLEGCR 146 (943)
Q Consensus 89 ~~L~~L~L~~n~i~~lp-~~~~~l~~L~~L~Ls~n~i~~lp-~~i~~L~~L~~L~L~~n~ 146 (943)
++|++|++++|+++.+| ..|.++++|++|++++|.|+.+| .+|.++++|++|++++|.
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~ 60 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNN 60 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSS
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCc
Confidence 46777888888777775 46677888888888888877774 567777788888777774
No 34
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=98.64 E-value=5.8e-09 Score=100.84 Aligned_cols=81 Identities=28% Similarity=0.305 Sum_probs=47.4
Q ss_pred cCcccEEEecCccccccCccccCCCCCceeecCCCcccccchhhhhccccceeecCCCcccccccHHHhccccCceEEcC
Q 002284 88 LQRLRVFSLRGYLISEVPDSIGDLSYLRYLNLSGTQIRTLPESVNKLYNLHTLLLEGCRELKKKCADMGNLIKLHHLNNS 167 (943)
Q Consensus 88 l~~L~~L~L~~n~i~~lp~~~~~l~~L~~L~Ls~n~i~~lp~~i~~L~~L~~L~L~~n~~~~~~p~~~~~L~~L~~L~l~ 167 (943)
.+.|+.+|||+|.|+.+.+++.-++.+|.|++|+|.|..+- .+..|++|+.|||++|. +..+-..=.+|.+.+.|.++
T Consensus 283 Wq~LtelDLS~N~I~~iDESvKL~Pkir~L~lS~N~i~~v~-nLa~L~~L~~LDLS~N~-Ls~~~Gwh~KLGNIKtL~La 360 (490)
T KOG1259|consen 283 WQELTELDLSGNLITQIDESVKLAPKLRRLILSQNRIRTVQ-NLAELPQLQLLDLSGNL-LAECVGWHLKLGNIKTLKLA 360 (490)
T ss_pred HhhhhhccccccchhhhhhhhhhccceeEEeccccceeeeh-hhhhcccceEeecccch-hHhhhhhHhhhcCEeeeehh
Confidence 44566666666666666666666666666666666666652 35666666666666653 33333334455556666666
Q ss_pred CCC
Q 002284 168 NTD 170 (943)
Q Consensus 168 ~n~ 170 (943)
.|.
T Consensus 361 ~N~ 363 (490)
T KOG1259|consen 361 QNK 363 (490)
T ss_pred hhh
Confidence 554
No 35
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=98.63 E-value=1.3e-08 Score=104.19 Aligned_cols=216 Identities=21% Similarity=0.179 Sum_probs=123.4
Q ss_pred cCCCCCceeecCCCcccccc--hhhhhccccceeecCCCccccccc--HHHhccccCceEEcCCCCCCcccccccccccc
Q 002284 109 GDLSYLRYLNLSGTQIRTLP--ESVNKLYNLHTLLLEGCRELKKKC--ADMGNLIKLHHLNNSNTDSLEEMPLGIGKLTC 184 (943)
Q Consensus 109 ~~l~~L~~L~Ls~n~i~~lp--~~i~~L~~L~~L~L~~n~~~~~~p--~~~~~L~~L~~L~l~~n~~~~~~p~~~~~L~~ 184 (943)
+++++||...|.++.+...+ +....+++++.|||++|-+...-| .-...|++|+.|+++.|. +...-. ...
T Consensus 118 sn~kkL~~IsLdn~~V~~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nr-l~~~~~---s~~- 192 (505)
T KOG3207|consen 118 SNLKKLREISLDNYRVEDAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNR-LSNFIS---SNT- 192 (505)
T ss_pred hhHHhhhheeecCccccccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhccccccc-ccCCcc---ccc-
Confidence 56778888888888877766 356778888888888874332222 335678888888888887 211100 000
Q ss_pred ccccCceEeccCCCCCcccccCcccccCceeecccccccCccchhhcccCCCCCCCeEEEEeecCCCCCCchhhhhHHhh
Q 002284 185 LLTLCNFVVGKDSGSGLRELKLLTHLCGTLNISKLENVKYVGDAMEAQLDGKKNLKVLMLEWTRSTNGLSSREAQTEKGV 264 (943)
Q Consensus 185 L~~L~~~~~~~~~~~~~~~l~~l~~L~~~l~~~~l~~~~~~~~~~~~~l~~~~~L~~L~l~~n~~~~~~~~~~~~~~~~~ 264 (943)
-..+++|+.|.++.++++ ...+
T Consensus 193 ------------------------------------------------~~~l~~lK~L~l~~CGls----------~k~V 214 (505)
T KOG3207|consen 193 ------------------------------------------------TLLLSHLKQLVLNSCGLS----------WKDV 214 (505)
T ss_pred ------------------------------------------------hhhhhhhheEEeccCCCC----------HHHH
Confidence 002345566666655552 2233
Q ss_pred hccCCCCCCcceEEEEeeCCCCCCcccCCCCcCCeeEEEEeCCCCCCCC--CCCCCCCCCCeeEEecCcCceeeCccccC
Q 002284 265 LDMLKPHRSLEQFCISGFGGKKFPTWLGYSLFSNLVTLKFQDCSMCTSM--PSVGQLPSLKHLEVRGMSRVKRLGSEFYG 342 (943)
Q Consensus 265 l~~l~~~~~L~~L~l~~~~~~~~p~~~~~~~l~~L~~L~L~~n~~~~~~--~~~~~l~~L~~L~L~~~~~~~~~~~~~~~ 342 (943)
...+..+|+|+.|++.+|.+. +-.......+..|+.|+|++|.+.... +..+.+|.|+.|+++.+..-..-..+...
T Consensus 215 ~~~~~~fPsl~~L~L~~N~~~-~~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~~L~~Lnls~tgi~si~~~d~~s 293 (505)
T KOG3207|consen 215 QWILLTFPSLEVLYLEANEII-LIKATSTKILQTLQELDLSNNNLIDFDQGYKVGTLPGLNQLNLSSTGIASIAEPDVES 293 (505)
T ss_pred HHHHHhCCcHHHhhhhccccc-ceecchhhhhhHHhhccccCCcccccccccccccccchhhhhccccCcchhcCCCccc
Confidence 344455667777777766311 111111123677888999988875543 46788888888888887633322222111
Q ss_pred CCCCCCCCCcceeecccccccccccccccCCccccCCcccEEeeccCCCcc
Q 002284 343 NDSPIPFPCLETLHFAEMQEWEEWIPHGCSQEIEGFPKLRELHIVRCSKLQ 393 (943)
Q Consensus 343 ~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~~~~~~~L~~L~l~~c~~l~ 393 (943)
......|++|+.|.+..|+. .+|-. -..+..+++|+.|.+.. +.++
T Consensus 294 ~~kt~~f~kL~~L~i~~N~I-~~w~s---l~~l~~l~nlk~l~~~~-n~ln 339 (505)
T KOG3207|consen 294 LDKTHTFPKLEYLNISENNI-RDWRS---LNHLRTLENLKHLRITL-NYLN 339 (505)
T ss_pred hhhhcccccceeeecccCcc-ccccc---cchhhccchhhhhhccc-cccc
Confidence 11134477777777777742 22221 12334456666666554 4553
No 36
>PRK15386 type III secretion protein GogB; Provisional
Probab=98.62 E-value=1.6e-07 Score=98.70 Aligned_cols=21 Identities=29% Similarity=0.558 Sum_probs=11.3
Q ss_pred CCcccccEEEeecCCCchhhH
Q 002284 675 NLPQALKFLSIWHCSKLESIV 695 (943)
Q Consensus 675 ~lp~~L~~L~l~~~~~l~~~~ 695 (943)
.+|.+|++|.+++|..++.+|
T Consensus 69 ~LP~sLtsL~Lsnc~nLtsLP 89 (426)
T PRK15386 69 VLPNELTEITIENCNNLTTLP 89 (426)
T ss_pred CCCCCCcEEEccCCCCcccCC
Confidence 345556666665555554443
No 37
>PRK15386 type III secretion protein GogB; Provisional
Probab=98.61 E-value=2.6e-07 Score=97.12 Aligned_cols=61 Identities=20% Similarity=0.325 Sum_probs=28.5
Q ss_pred CCCCccEEEeecCCCCcccccccCCCCCCeEeecCCCCC-ccCCCCCCCCccceEeecCCchHHH
Q 002284 852 LPACLTQLEIFNFPNLERLSSSICDQNLTSLKLTNCPKL-KYFPEKGLPASLLRLEIKKCPLIEK 915 (943)
Q Consensus 852 ~~~~L~~L~l~~~~~l~~l~~~~~~~~L~~L~l~~C~~L-~~~~~~~l~~sL~~L~i~~C~~l~~ 915 (943)
+|++|++|.+.+|..+. +|.. -..+|++|.+..+... -.++...+|+++ .|++.+|-++..
T Consensus 154 LPsSLk~L~Is~c~~i~-LP~~-LP~SLk~L~ls~n~~~sLeI~~~sLP~nl-~L~f~n~lkL~~ 215 (426)
T PRK15386 154 ISPSLKTLSLTGCSNII-LPEK-LPESLQSITLHIEQKTTWNISFEGFPDGL-DIDLQNSVLLSP 215 (426)
T ss_pred cCCcccEEEecCCCccc-Cccc-ccccCcEEEecccccccccCccccccccc-EechhhhcccCH
Confidence 45555555555555332 2221 1245666655543211 112333456666 666666655443
No 38
>PLN03150 hypothetical protein; Provisional
Probab=98.58 E-value=8.6e-08 Score=111.07 Aligned_cols=99 Identities=23% Similarity=0.287 Sum_probs=86.0
Q ss_pred cccEEEecCcccc-ccCccccCCCCCceeecCCCccc-ccchhhhhccccceeecCCCcccccccHHHhccccCceEEcC
Q 002284 90 RLRVFSLRGYLIS-EVPDSIGDLSYLRYLNLSGTQIR-TLPESVNKLYNLHTLLLEGCRELKKKCADMGNLIKLHHLNNS 167 (943)
Q Consensus 90 ~L~~L~L~~n~i~-~lp~~~~~l~~L~~L~Ls~n~i~-~lp~~i~~L~~L~~L~L~~n~~~~~~p~~~~~L~~L~~L~l~ 167 (943)
.++.|+|++|.+. .+|..|+.+++|++|+|++|.+. .+|..++.+++|++|+|++|.+.+.+|..++++++|++|+++
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls 498 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLN 498 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECc
Confidence 4788999999976 56889999999999999999997 678899999999999999998888999999999999999999
Q ss_pred CCCCCcccccccccc-cccccc
Q 002284 168 NTDSLEEMPLGIGKL-TCLLTL 188 (943)
Q Consensus 168 ~n~~~~~~p~~~~~L-~~L~~L 188 (943)
+|.+.+.+|..++.+ .++..+
T Consensus 499 ~N~l~g~iP~~l~~~~~~~~~l 520 (623)
T PLN03150 499 GNSLSGRVPAALGGRLLHRASF 520 (623)
T ss_pred CCcccccCChHHhhccccCceE
Confidence 999888999887653 234444
No 39
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.55 E-value=5.1e-08 Score=74.63 Aligned_cols=59 Identities=31% Similarity=0.354 Sum_probs=52.9
Q ss_pred CCCceeecCCCcccccc-hhhhhccccceeecCCCcccccccHHHhccccCceEEcCCCC
Q 002284 112 SYLRYLNLSGTQIRTLP-ESVNKLYNLHTLLLEGCRELKKKCADMGNLIKLHHLNNSNTD 170 (943)
Q Consensus 112 ~~L~~L~Ls~n~i~~lp-~~i~~L~~L~~L~L~~n~~~~~~p~~~~~L~~L~~L~l~~n~ 170 (943)
++|++|++++|+|+.+| ..|.++++|++|++++|.+....|..|.++++|++|++++|+
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~ 60 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNN 60 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSS
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCc
Confidence 47999999999999997 588999999999999998655555679999999999999997
No 40
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=98.54 E-value=6.4e-08 Score=107.39 Aligned_cols=123 Identities=25% Similarity=0.337 Sum_probs=102.5
Q ss_pred ccccccEEeecccCCCCCCcchhccchhhhccC-cccEEEecCccccccCccccCCCCCceeecCCCcccccchhhhhcc
Q 002284 57 DIQHLRTLLPVTLLSSRPGYLARSILPRLLKLQ-RLRVFSLRGYLISEVPDSIGDLSYLRYLNLSGTQIRTLPESVNKLY 135 (943)
Q Consensus 57 ~~~~Lr~L~~~~~~~l~~~~~~~~~~~~~~~l~-~L~~L~L~~n~i~~lp~~~~~l~~L~~L~Ls~n~i~~lp~~i~~L~ 135 (943)
..+.+..|.+..+. ...+++....++ +|+.|++++|.+..+|..++.+++|+.|++++|++.++|...+.+.
T Consensus 114 ~~~~l~~L~l~~n~-------i~~i~~~~~~~~~nL~~L~l~~N~i~~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~~ 186 (394)
T COG4886 114 ELTNLTSLDLDNNN-------ITDIPPLIGLLKSNLKELDLSDNKIESLPSPLRNLPNLKNLDLSFNDLSDLPKLLSNLS 186 (394)
T ss_pred cccceeEEecCCcc-------cccCccccccchhhcccccccccchhhhhhhhhccccccccccCCchhhhhhhhhhhhh
Confidence 44567777654432 567777777775 9999999999999999899999999999999999999998888999
Q ss_pred ccceeecCCCcccccccHHHhccccCceEEcCCCCCCcccccccccccccccc
Q 002284 136 NLHTLLLEGCRELKKKCADMGNLIKLHHLNNSNTDSLEEMPLGIGKLTCLLTL 188 (943)
Q Consensus 136 ~L~~L~L~~n~~~~~~p~~~~~L~~L~~L~l~~n~~~~~~p~~~~~L~~L~~L 188 (943)
+|+.|++++|. +..+|..++.+..|++|++++|. ....+..++++.++..+
T Consensus 187 ~L~~L~ls~N~-i~~l~~~~~~~~~L~~l~~~~N~-~~~~~~~~~~~~~l~~l 237 (394)
T COG4886 187 NLNNLDLSGNK-ISDLPPEIELLSALEELDLSNNS-IIELLSSLSNLKNLSGL 237 (394)
T ss_pred hhhheeccCCc-cccCchhhhhhhhhhhhhhcCCc-ceecchhhhhccccccc
Confidence 99999999985 88899888888899999999997 55566666666666655
No 41
>PLN03150 hypothetical protein; Provisional
Probab=98.47 E-value=1.8e-07 Score=108.34 Aligned_cols=109 Identities=15% Similarity=0.075 Sum_probs=70.8
Q ss_pred ccEEEeecCCCchhhHhhhcccccccEEEeeccCCcccccccccCCCCccEEeccCCCCCcccCcCCccccccceeeecc
Q 002284 680 LKFLSIWHCSKLESIVERLDNKISLEVIEIVSCENLKMLPHGLHKLWHLQEIDIQDCENLVSFPEGGLLSAKLKRLVIYG 759 (943)
Q Consensus 680 L~~L~l~~~~~l~~~~~~~~~l~~L~~L~l~~~~~~~~~p~~~~~l~~L~~L~l~~~~~l~~~p~~~~~l~~L~~L~l~~ 759 (943)
++.|+++++...+.+|..+..+++|+.|++++|.+.+.+|..++.+++|+.|+|++|...+.+|..+..+++|+.|++++
T Consensus 420 v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~ 499 (623)
T PLN03150 420 IDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNG 499 (623)
T ss_pred EEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcC
Confidence 55666666666566666666677777777777766666666666677777777777766666666666666777777777
Q ss_pred ccCCccCCCcCCCC-CCCCceeecCCCCCc
Q 002284 760 CKKLEALPEGMHNL-SSLQYLTIGGVPSLL 788 (943)
Q Consensus 760 ~~~l~~~p~~~~~l-~~L~~L~l~~~~~l~ 788 (943)
|...+.+|..+... .++..+++.+|+.+.
T Consensus 500 N~l~g~iP~~l~~~~~~~~~l~~~~N~~lc 529 (623)
T PLN03150 500 NSLSGRVPAALGGRLLHRASFNFTDNAGLC 529 (623)
T ss_pred CcccccCChHHhhccccCceEEecCCcccc
Confidence 66666666655432 345556666655443
No 42
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=98.43 E-value=5.3e-08 Score=94.34 Aligned_cols=122 Identities=28% Similarity=0.307 Sum_probs=98.7
Q ss_pred cccccEEeecccCCCCCCcchhccchhhhccCcccEEEecCccccccCccccCCCCCceeecCCCcccccchhhhhcccc
Q 002284 58 IQHLRTLLPVTLLSSRPGYLARSILPRLLKLQRLRVFSLRGYLISEVPDSIGDLSYLRYLNLSGTQIRTLPESVNKLYNL 137 (943)
Q Consensus 58 ~~~Lr~L~~~~~~~l~~~~~~~~~~~~~~~l~~L~~L~L~~n~i~~lp~~~~~l~~L~~L~Ls~n~i~~lp~~i~~L~~L 137 (943)
++-|.++.+ ++|. ...+-.++--.+.+|+|++|+|.|..+.. +..|.+|+.||||+|.++++-..-.+|-+.
T Consensus 283 Wq~LtelDL------S~N~-I~~iDESvKL~Pkir~L~lS~N~i~~v~n-La~L~~L~~LDLS~N~Ls~~~Gwh~KLGNI 354 (490)
T KOG1259|consen 283 WQELTELDL------SGNL-ITQIDESVKLAPKLRRLILSQNRIRTVQN-LAELPQLQLLDLSGNLLAECVGWHLKLGNI 354 (490)
T ss_pred Hhhhhhccc------cccc-hhhhhhhhhhccceeEEeccccceeeehh-hhhcccceEeecccchhHhhhhhHhhhcCE
Confidence 445555543 4444 34555666678999999999999988854 899999999999999999997677899999
Q ss_pred ceeecCCCcccccccHHHhccccCceEEcCCCCCCcccc--ccccccccccccCc
Q 002284 138 HTLLLEGCRELKKKCADMGNLIKLHHLNNSNTDSLEEMP--LGIGKLTCLLTLCN 190 (943)
Q Consensus 138 ~~L~L~~n~~~~~~p~~~~~L~~L~~L~l~~n~~~~~~p--~~~~~L~~L~~L~~ 190 (943)
++|.|++|. ++.+ +++++|.+|..||+++|+ +..+. .+||+|+.|+++..
T Consensus 355 KtL~La~N~-iE~L-SGL~KLYSLvnLDl~~N~-Ie~ldeV~~IG~LPCLE~l~L 406 (490)
T KOG1259|consen 355 KTLKLAQNK-IETL-SGLRKLYSLVNLDLSSNQ-IEELDEVNHIGNLPCLETLRL 406 (490)
T ss_pred eeeehhhhh-Hhhh-hhhHhhhhheeccccccc-hhhHHHhcccccccHHHHHhh
Confidence 999999984 6655 579999999999999999 77665 35999999998844
No 43
>KOG2120 consensus SCF ubiquitin ligase, Skp2 component [Posttranslational modification, protein turnover, chaperones]
Probab=98.31 E-value=1.9e-08 Score=97.36 Aligned_cols=157 Identities=15% Similarity=0.133 Sum_probs=112.6
Q ss_pred ccccEEEeecCCCch-hhHhhhcccccccEEEeeccCCcccccccccCCCCccEEeccCCCCCcccCcC--Cccccccce
Q 002284 678 QALKFLSIWHCSKLE-SIVERLDNKISLEVIEIVSCENLKMLPHGLHKLWHLQEIDIQDCENLVSFPEG--GLLSAKLKR 754 (943)
Q Consensus 678 ~~L~~L~l~~~~~l~-~~~~~~~~l~~L~~L~l~~~~~~~~~p~~~~~l~~L~~L~l~~~~~l~~~p~~--~~~l~~L~~ 754 (943)
+.++.||+++-.... .+...+..|.+|+.|.+.+++.-..+...+.+=..|+.|+|+.|..++..... +.+++.|..
T Consensus 185 sRlq~lDLS~s~it~stl~~iLs~C~kLk~lSlEg~~LdD~I~~~iAkN~~L~~lnlsm~sG~t~n~~~ll~~scs~L~~ 264 (419)
T KOG2120|consen 185 SRLQHLDLSNSVITVSTLHGILSQCSKLKNLSLEGLRLDDPIVNTIAKNSNLVRLNLSMCSGFTENALQLLLSSCSRLDE 264 (419)
T ss_pred hhhHHhhcchhheeHHHHHHHHHHHHhhhhccccccccCcHHHHHHhccccceeeccccccccchhHHHHHHHhhhhHhh
Confidence 458888888865544 34445788899999999999888888788888889999999999887765443 456889999
Q ss_pred eeeccccCCccCCCc-CC-CCCCCCceeecCCCCCcccc---CCCCCCCCcceEEecCCcchhccccccCCCCCCCccEE
Q 002284 755 LVIYGCKKLEALPEG-MH-NLSSLQYLTIGGVPSLLCFT---EDGLFPTNLHSLEIDGMKIWKSLMQLGGFHRYTSLRRL 829 (943)
Q Consensus 755 L~l~~~~~l~~~p~~-~~-~l~~L~~L~l~~~~~l~~~~---~~~~~~~~L~~L~l~~c~~l~~~~~~~~~~~l~~L~~L 829 (943)
|++++|......-.. +. --++|..|+++||...-... .-....++|.+||+++|..++... ...+-+++.|++|
T Consensus 265 LNlsWc~l~~~~Vtv~V~hise~l~~LNlsG~rrnl~~sh~~tL~~rcp~l~~LDLSD~v~l~~~~-~~~~~kf~~L~~l 343 (419)
T KOG2120|consen 265 LNLSWCFLFTEKVTVAVAHISETLTQLNLSGYRRNLQKSHLSTLVRRCPNLVHLDLSDSVMLKNDC-FQEFFKFNYLQHL 343 (419)
T ss_pred cCchHhhccchhhhHHHhhhchhhhhhhhhhhHhhhhhhHHHHHHHhCCceeeeccccccccCchH-HHHHHhcchheee
Confidence 999999876554221 12 23578888898877432111 112246888888888888777633 2346678888888
Q ss_pred EecCCC
Q 002284 830 AISGCD 835 (943)
Q Consensus 830 ~l~~c~ 835 (943)
.++.|.
T Consensus 344 SlsRCY 349 (419)
T KOG2120|consen 344 SLSRCY 349 (419)
T ss_pred ehhhhc
Confidence 888873
No 44
>KOG2120 consensus SCF ubiquitin ligase, Skp2 component [Posttranslational modification, protein turnover, chaperones]
Probab=98.28 E-value=4.1e-08 Score=95.16 Aligned_cols=89 Identities=24% Similarity=0.257 Sum_probs=44.6
Q ss_pred cCCCCCCCeEEEEeecCCCCCCchhhhhHHhhhccC-CCCCCcceEEEEeeCCCCCCcccC--CCCcCCeeEEEEeCCCC
Q 002284 233 LDGKKNLKVLMLEWTRSTNGLSSREAQTEKGVLDML-KPHRSLEQFCISGFGGKKFPTWLG--YSLFSNLVTLKFQDCSM 309 (943)
Q Consensus 233 l~~~~~L~~L~l~~n~~~~~~~~~~~~~~~~~l~~l-~~~~~L~~L~l~~~~~~~~p~~~~--~~~l~~L~~L~L~~n~~ 309 (943)
+..++.|+.|+++|+..+. + .+-... .--++|+.|.++|+.-.-.-..+. ...+++|.+|||++|..
T Consensus 256 ~~scs~L~~LNlsWc~l~~---------~-~Vtv~V~hise~l~~LNlsG~rrnl~~sh~~tL~~rcp~l~~LDLSD~v~ 325 (419)
T KOG2120|consen 256 LSSCSRLDELNLSWCFLFT---------E-KVTVAVAHISETLTQLNLSGYRRNLQKSHLSTLVRRCPNLVHLDLSDSVM 325 (419)
T ss_pred HHhhhhHhhcCchHhhccc---------h-hhhHHHhhhchhhhhhhhhhhHhhhhhhHHHHHHHhCCceeeeccccccc
Confidence 6778888899999988641 0 010011 112466677777654221111110 02256666666666543
Q ss_pred CCC-CC-CCCCCCCCCeeEEecCc
Q 002284 310 CTS-MP-SVGQLPSLKHLEVRGMS 331 (943)
Q Consensus 310 ~~~-~~-~~~~l~~L~~L~L~~~~ 331 (943)
... .. .+..++.|++|.++.|.
T Consensus 326 l~~~~~~~~~kf~~L~~lSlsRCY 349 (419)
T KOG2120|consen 326 LKNDCFQEFFKFNYLQHLSLSRCY 349 (419)
T ss_pred cCchHHHHHHhcchheeeehhhhc
Confidence 221 11 44555555555555554
No 45
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=98.25 E-value=9.2e-07 Score=61.44 Aligned_cols=40 Identities=28% Similarity=0.482 Sum_probs=25.9
Q ss_pred CcccEEEecCccccccCccccCCCCCceeecCCCcccccc
Q 002284 89 QRLRVFSLRGYLISEVPDSIGDLSYLRYLNLSGTQIRTLP 128 (943)
Q Consensus 89 ~~L~~L~L~~n~i~~lp~~~~~l~~L~~L~Ls~n~i~~lp 128 (943)
++|++|++++|+|+.+|..+++|++|++|++++|+|+++|
T Consensus 1 ~~L~~L~l~~N~i~~l~~~l~~l~~L~~L~l~~N~i~~i~ 40 (44)
T PF12799_consen 1 KNLEELDLSNNQITDLPPELSNLPNLETLNLSNNPISDIS 40 (44)
T ss_dssp TT-SEEEETSSS-SSHGGHGTTCTTSSEEEETSSCCSBEG
T ss_pred CcceEEEccCCCCcccCchHhCCCCCCEEEecCCCCCCCc
Confidence 3567777777777777666677777777777777766653
No 46
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=98.21 E-value=2.3e-07 Score=102.85 Aligned_cols=104 Identities=27% Similarity=0.344 Sum_probs=70.7
Q ss_pred cchhhhccCcccEEEecCccccccCccccCCCCCceeecCCCcccccchhhhhccccceeecCCCcccccccHHHhcccc
Q 002284 81 ILPRLLKLQRLRVFSLRGYLISEVPDSIGDLSYLRYLNLSGTQIRTLPESVNKLYNLHTLLLEGCRELKKKCADMGNLIK 160 (943)
Q Consensus 81 ~~~~~~~l~~L~~L~L~~n~i~~lp~~~~~l~~L~~L~Ls~n~i~~lp~~i~~L~~L~~L~L~~n~~~~~~p~~~~~L~~ 160 (943)
+...+..++.|..|++.+|.|..+...+..+.+|++|++++|.|+.+ ..+..+..|+.|++++|. +..+ ..+..+++
T Consensus 87 ~~~~l~~~~~l~~l~l~~n~i~~i~~~l~~~~~L~~L~ls~N~I~~i-~~l~~l~~L~~L~l~~N~-i~~~-~~~~~l~~ 163 (414)
T KOG0531|consen 87 ILNHLSKLKSLEALDLYDNKIEKIENLLSSLVNLQVLDLSFNKITKL-EGLSTLTLLKELNLSGNL-ISDI-SGLESLKS 163 (414)
T ss_pred hhcccccccceeeeeccccchhhcccchhhhhcchheeccccccccc-cchhhccchhhheeccCc-chhc-cCCccchh
Confidence 33445577888888888888877765577788888888888888877 456677778888888875 3333 34566778
Q ss_pred CceEEcCCCCCCcccccc-cccccccccc
Q 002284 161 LHHLNNSNTDSLEEMPLG-IGKLTCLLTL 188 (943)
Q Consensus 161 L~~L~l~~n~~~~~~p~~-~~~L~~L~~L 188 (943)
|+.+++++|. +..+... ...+.+++.+
T Consensus 164 L~~l~l~~n~-i~~ie~~~~~~~~~l~~l 191 (414)
T KOG0531|consen 164 LKLLDLSYNR-IVDIENDELSELISLEEL 191 (414)
T ss_pred hhcccCCcch-hhhhhhhhhhhccchHHH
Confidence 8888888887 4444432 3445555554
No 47
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=98.19 E-value=1.8e-07 Score=93.23 Aligned_cols=256 Identities=19% Similarity=0.223 Sum_probs=132.1
Q ss_pred chhhhccCcccEEEecCccccc-----cCccccCCCCCceeecCCCc----ccccchhh-------hhccccceeecCCC
Q 002284 82 LPRLLKLQRLRVFSLRGYLISE-----VPDSIGDLSYLRYLNLSGTQ----IRTLPESV-------NKLYNLHTLLLEGC 145 (943)
Q Consensus 82 ~~~~~~l~~L~~L~L~~n~i~~-----lp~~~~~l~~L~~L~Ls~n~----i~~lp~~i-------~~L~~L~~L~L~~n 145 (943)
.+..-.+..++.++|++|.++. +-..+.+.++||.-++++-. ..++|+.+ -..++|++||||+|
T Consensus 23 ~~~~~~~~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDN 102 (382)
T KOG1909|consen 23 EEELEPMDSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDMFTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDN 102 (382)
T ss_pred HHHhcccCceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhhhcCCcHHHHHHHHHHHHHHHhcCCceeEeecccc
Confidence 3334478899999999998763 44556777888888888652 22455443 34458888888888
Q ss_pred cccccccHH----HhccccCceEEcCCCCCCcccccc-ccccccccccCceEeccCCCCCcccccCcccccCceeecccc
Q 002284 146 RELKKKCAD----MGNLIKLHHLNNSNTDSLEEMPLG-IGKLTCLLTLCNFVVGKDSGSGLRELKLLTHLCGTLNISKLE 220 (943)
Q Consensus 146 ~~~~~~p~~----~~~L~~L~~L~l~~n~~~~~~p~~-~~~L~~L~~L~~~~~~~~~~~~~~~l~~l~~L~~~l~~~~l~ 220 (943)
-+-..-+.. +...+.|++|+|.+|. ++..... +++ .|.+|.
T Consensus 103 A~G~~g~~~l~~ll~s~~~L~eL~L~N~G-lg~~ag~~l~~--al~~l~------------------------------- 148 (382)
T KOG1909|consen 103 AFGPKGIRGLEELLSSCTDLEELYLNNCG-LGPEAGGRLGR--ALFELA------------------------------- 148 (382)
T ss_pred ccCccchHHHHHHHHhccCHHHHhhhcCC-CChhHHHHHHH--HHHHHH-------------------------------
Confidence 643333332 5567888888888887 4433221 221 122220
Q ss_pred cccCccchhhcccCCCCCCCeEEEEeecCCCCCCchhhhhHHhhhccCCCCCCcceEEEEeeCCCCCCccc---CCCCcC
Q 002284 221 NVKYVGDAMEAQLDGKKNLKVLMLEWTRSTNGLSSREAQTEKGVLDMLKPHRSLEQFCISGFGGKKFPTWL---GYSLFS 297 (943)
Q Consensus 221 ~~~~~~~~~~~~l~~~~~L~~L~l~~n~~~~~~~~~~~~~~~~~l~~l~~~~~L~~L~l~~~~~~~~p~~~---~~~~l~ 297 (943)
........++|+++....|++.+.. ....-..++.++.|+.+.+..+.+..--... ....++
T Consensus 149 --------~~kk~~~~~~Lrv~i~~rNrlen~g-------a~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~ 213 (382)
T KOG1909|consen 149 --------VNKKAASKPKLRVFICGRNRLENGG-------ATALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCP 213 (382)
T ss_pred --------HHhccCCCcceEEEEeecccccccc-------HHHHHHHHHhccccceEEEecccccCchhHHHHHHHHhCC
Confidence 0011334566777777766663211 1122234445566666666655432111000 012366
Q ss_pred CeeEEEEeCCCCCCC----CC-CCCCCCCCCeeEEecCcCceeeCccccCCCCCCCCCCcceeecccccccccccccccC
Q 002284 298 NLVTLKFQDCSMCTS----MP-SVGQLPSLKHLEVRGMSRVKRLGSEFYGNDSPIPFPCLETLHFAEMQEWEEWIPHGCS 372 (943)
Q Consensus 298 ~L~~L~L~~n~~~~~----~~-~~~~l~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~ 372 (943)
+|+.|+|++|.++.. +. .+..+++|+.|++++|..-..-...+.. .....+|+|+.|.+.+|..-.+-. ..+.
T Consensus 214 ~LevLdl~DNtft~egs~~LakaL~s~~~L~El~l~dcll~~~Ga~a~~~-al~~~~p~L~vl~l~gNeIt~da~-~~la 291 (382)
T KOG1909|consen 214 HLEVLDLRDNTFTLEGSVALAKALSSWPHLRELNLGDCLLENEGAIAFVD-ALKESAPSLEVLELAGNEITRDAA-LALA 291 (382)
T ss_pred cceeeecccchhhhHHHHHHHHHhcccchheeecccccccccccHHHHHH-HHhccCCCCceeccCcchhHHHHH-HHHH
Confidence 777777777766421 11 4555667777777776421111111100 001115666666666653211100 0011
Q ss_pred CccccCCcccEEeecc
Q 002284 373 QEIEGFPKLRELHIVR 388 (943)
Q Consensus 373 ~~~~~~~~L~~L~l~~ 388 (943)
......|.|+.|+|++
T Consensus 292 ~~~~ek~dL~kLnLng 307 (382)
T KOG1909|consen 292 ACMAEKPDLEKLNLNG 307 (382)
T ss_pred HHHhcchhhHHhcCCc
Confidence 1223356666666666
No 48
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=98.08 E-value=5.4e-07 Score=99.93 Aligned_cols=100 Identities=26% Similarity=0.361 Sum_probs=78.7
Q ss_pred hccCcccEEEecCccccccCccccCCCCCceeecCCCcccccchhhhhccccceeecCCCcccccccHHHhccccCceEE
Q 002284 86 LKLQRLRVFSLRGYLISEVPDSIGDLSYLRYLNLSGTQIRTLPESVNKLYNLHTLLLEGCRELKKKCADMGNLIKLHHLN 165 (943)
Q Consensus 86 ~~l~~L~~L~L~~n~i~~lp~~~~~l~~L~~L~Ls~n~i~~lp~~i~~L~~L~~L~L~~n~~~~~~p~~~~~L~~L~~L~ 165 (943)
..+..++.+.+..|.+..+-..++.+++|++|++.+|.|..+...+..+++|++|++++|. ++.+ .++..++.|+.|+
T Consensus 69 ~~l~~l~~l~l~~n~i~~~~~~l~~~~~l~~l~l~~n~i~~i~~~l~~~~~L~~L~ls~N~-I~~i-~~l~~l~~L~~L~ 146 (414)
T KOG0531|consen 69 ESLTSLKELNLRQNLIAKILNHLSKLKSLEALDLYDNKIEKIENLLSSLVNLQVLDLSFNK-ITKL-EGLSTLTLLKELN 146 (414)
T ss_pred HHhHhHHhhccchhhhhhhhcccccccceeeeeccccchhhcccchhhhhcchheeccccc-cccc-cchhhccchhhhe
Confidence 3567777788999998886566899999999999999999996558999999999999986 4444 3578888899999
Q ss_pred cCCCCCCccccccccccccccccC
Q 002284 166 NSNTDSLEEMPLGIGKLTCLLTLC 189 (943)
Q Consensus 166 l~~n~~~~~~p~~~~~L~~L~~L~ 189 (943)
+.+|. +..+. ++..+++|+.++
T Consensus 147 l~~N~-i~~~~-~~~~l~~L~~l~ 168 (414)
T KOG0531|consen 147 LSGNL-ISDIS-GLESLKSLKLLD 168 (414)
T ss_pred eccCc-chhcc-CCccchhhhccc
Confidence 99998 55543 344455665553
No 49
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=98.03 E-value=4.4e-07 Score=90.58 Aligned_cols=108 Identities=19% Similarity=0.237 Sum_probs=68.9
Q ss_pred cccccccEEeecccCCCCCCcchhccc----hhhhccCcccEEEecCccc----cccC-------ccccCCCCCceeecC
Q 002284 56 YDIQHLRTLLPVTLLSSRPGYLARSIL----PRLLKLQRLRVFSLRGYLI----SEVP-------DSIGDLSYLRYLNLS 120 (943)
Q Consensus 56 ~~~~~Lr~L~~~~~~~l~~~~~~~~~~----~~~~~l~~L~~L~L~~n~i----~~lp-------~~~~~l~~L~~L~Ls 120 (943)
..+..+..+.+ ++|.+...-. +.+.+-+.||.-+++.-.. ..+| ..+-..++|++||||
T Consensus 27 ~~~~s~~~l~l------sgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLS 100 (382)
T KOG1909|consen 27 EPMDSLTKLDL------SGNTFGTEAARAIAKVLASKKELREVNLSDMFTGRLKDEIPEALKMLSKALLGCPKLQKLDLS 100 (382)
T ss_pred cccCceEEEec------cCCchhHHHHHHHHHHHhhcccceeeehHhhhcCCcHHHHHHHHHHHHHHHhcCCceeEeecc
Confidence 34556666654 4455544332 3333778999999987542 2344 345566799999999
Q ss_pred CCccc--cc---chhhhhccccceeecCCCcccccccHH-H-------------hccccCceEEcCCCC
Q 002284 121 GTQIR--TL---PESVNKLYNLHTLLLEGCRELKKKCAD-M-------------GNLIKLHHLNNSNTD 170 (943)
Q Consensus 121 ~n~i~--~l---p~~i~~L~~L~~L~L~~n~~~~~~p~~-~-------------~~L~~L~~L~l~~n~ 170 (943)
+|-+. .+ -+-+.+.+.|++|.|.+|. ++..... + +.-++||++..++|+
T Consensus 101 DNA~G~~g~~~l~~ll~s~~~L~eL~L~N~G-lg~~ag~~l~~al~~l~~~kk~~~~~~Lrv~i~~rNr 168 (382)
T KOG1909|consen 101 DNAFGPKGIRGLEELLSSCTDLEELYLNNCG-LGPEAGGRLGRALFELAVNKKAASKPKLRVFICGRNR 168 (382)
T ss_pred ccccCccchHHHHHHHHhccCHHHHhhhcCC-CChhHHHHHHHHHHHHHHHhccCCCcceEEEEeeccc
Confidence 99765 23 2456789999999999996 4433222 2 234567777776666
No 50
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=97.96 E-value=7.2e-06 Score=56.99 Aligned_cols=35 Identities=40% Similarity=0.472 Sum_probs=27.8
Q ss_pred CCCceeecCCCcccccchhhhhccccceeecCCCc
Q 002284 112 SYLRYLNLSGTQIRTLPESVNKLYNLHTLLLEGCR 146 (943)
Q Consensus 112 ~~L~~L~Ls~n~i~~lp~~i~~L~~L~~L~L~~n~ 146 (943)
++||+|++++|+|+.+|..+++|++|++|++++|.
T Consensus 1 ~~L~~L~l~~N~i~~l~~~l~~l~~L~~L~l~~N~ 35 (44)
T PF12799_consen 1 KNLEELDLSNNQITDLPPELSNLPNLETLNLSNNP 35 (44)
T ss_dssp TT-SEEEETSSS-SSHGGHGTTCTTSSEEEETSSC
T ss_pred CcceEEEccCCCCcccCchHhCCCCCCEEEecCCC
Confidence 47888888888888888778888888888888886
No 51
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=97.90 E-value=3.1e-06 Score=72.65 Aligned_cols=92 Identities=24% Similarity=0.279 Sum_probs=78.0
Q ss_pred hhccCcccEEEecCccccccCcccc-CCCCCceeecCCCcccccchhhhhccccceeecCCCcccccccHHHhccccCce
Q 002284 85 LLKLQRLRVFSLRGYLISEVPDSIG-DLSYLRYLNLSGTQIRTLPESVNKLYNLHTLLLEGCRELKKKCADMGNLIKLHH 163 (943)
Q Consensus 85 ~~~l~~L~~L~L~~n~i~~lp~~~~-~l~~L~~L~Ls~n~i~~lp~~i~~L~~L~~L~L~~n~~~~~~p~~~~~L~~L~~ 163 (943)
+....+|+..+|++|.+..+|..|. ..+-.+.|++++|.|.++|.++..++.|+.|+++.|. +...|..|..|.+|-.
T Consensus 49 l~~~~el~~i~ls~N~fk~fp~kft~kf~t~t~lNl~~neisdvPeE~Aam~aLr~lNl~~N~-l~~~p~vi~~L~~l~~ 127 (177)
T KOG4579|consen 49 LSKGYELTKISLSDNGFKKFPKKFTIKFPTATTLNLANNEISDVPEELAAMPALRSLNLRFNP-LNAEPRVIAPLIKLDM 127 (177)
T ss_pred HhCCceEEEEecccchhhhCCHHHhhccchhhhhhcchhhhhhchHHHhhhHHhhhcccccCc-cccchHHHHHHHhHHH
Confidence 3367788888999999999988874 4558999999999999999889999999999999986 7778888888999999
Q ss_pred EEcCCCCCCcccccc
Q 002284 164 LNNSNTDSLEEMPLG 178 (943)
Q Consensus 164 L~l~~n~~~~~~p~~ 178 (943)
|+...|. ...+|.+
T Consensus 128 Lds~~na-~~eid~d 141 (177)
T KOG4579|consen 128 LDSPENA-RAEIDVD 141 (177)
T ss_pred hcCCCCc-cccCcHH
Confidence 9998888 6777755
No 52
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=97.90 E-value=4.6e-07 Score=98.59 Aligned_cols=93 Identities=28% Similarity=0.319 Sum_probs=66.8
Q ss_pred chhhhccCcccEEEecCccccccCc------c--------------------ccC------CCCCceeecCCCcccccch
Q 002284 82 LPRLLKLQRLRVFSLRGYLISEVPD------S--------------------IGD------LSYLRYLNLSGTQIRTLPE 129 (943)
Q Consensus 82 ~~~~~~l~~L~~L~L~~n~i~~lp~------~--------------------~~~------l~~L~~L~Ls~n~i~~lp~ 129 (943)
|-++|.++.||+|.|.++.+...-. . ++. -..|.+-+.++|.+..+-+
T Consensus 102 pi~ifpF~sLr~LElrg~~L~~~~GL~~lr~qLe~LIC~~Sl~Al~~v~ascggd~~ns~~Wn~L~~a~fsyN~L~~mD~ 181 (1096)
T KOG1859|consen 102 PISIFPFRSLRVLELRGCDLSTAKGLQELRHQLEKLICHNSLDALRHVFASCGGDISNSPVWNKLATASFSYNRLVLMDE 181 (1096)
T ss_pred CceeccccceeeEEecCcchhhhhhhHHHHHhhhhhhhhccHHHHHHHHHHhccccccchhhhhHhhhhcchhhHHhHHH
Confidence 6678899999999999987653210 0 011 1134555666777777777
Q ss_pred hhhhccccceeecCCCcccccccHHHhccccCceEEcCCCCCCccccc
Q 002284 130 SVNKLYNLHTLLLEGCRELKKKCADMGNLIKLHHLNNSNTDSLEEMPL 177 (943)
Q Consensus 130 ~i~~L~~L~~L~L~~n~~~~~~p~~~~~L~~L~~L~l~~n~~~~~~p~ 177 (943)
++.-++.|+.|||++|..... +.+..+++|++||+++|. +..+|.
T Consensus 182 SLqll~ale~LnLshNk~~~v--~~Lr~l~~LkhLDlsyN~-L~~vp~ 226 (1096)
T KOG1859|consen 182 SLQLLPALESLNLSHNKFTKV--DNLRRLPKLKHLDLSYNC-LRHVPQ 226 (1096)
T ss_pred HHHHHHHhhhhccchhhhhhh--HHHHhcccccccccccch-hccccc
Confidence 788889999999999865443 378889999999999998 777774
No 53
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.69 E-value=1.2e-05 Score=78.40 Aligned_cols=84 Identities=26% Similarity=0.347 Sum_probs=36.7
Q ss_pred ccCcccEEEecCccccccC---ccccCCCCCceeecCCCcccccchhh-hhccccceeecCCCccc-ccccHHHhccccC
Q 002284 87 KLQRLRVFSLRGYLISEVP---DSIGDLSYLRYLNLSGTQIRTLPESV-NKLYNLHTLLLEGCREL-KKKCADMGNLIKL 161 (943)
Q Consensus 87 ~l~~L~~L~L~~n~i~~lp---~~~~~l~~L~~L~Ls~n~i~~lp~~i-~~L~~L~~L~L~~n~~~-~~~p~~~~~L~~L 161 (943)
..++++.|||.+|.|+.-. .-+.+|++|++|+|+.|.+..--.+. ..+.+|++|-|.+.... ......+..++.+
T Consensus 69 ~~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~lp~p~~nl~~lVLNgT~L~w~~~~s~l~~lP~v 148 (418)
T KOG2982|consen 69 SVTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSLPLPLKNLRVLVLNGTGLSWTQSTSSLDDLPKV 148 (418)
T ss_pred HhhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccCcccccceEEEEEcCCCCChhhhhhhhhcchhh
Confidence 4555555555555554321 12245555555555555433110111 23445555555543221 1112224445555
Q ss_pred ceEEcCCCC
Q 002284 162 HHLNNSNTD 170 (943)
Q Consensus 162 ~~L~l~~n~ 170 (943)
+.|.++.|.
T Consensus 149 telHmS~N~ 157 (418)
T KOG2982|consen 149 TELHMSDNS 157 (418)
T ss_pred hhhhhccch
Confidence 555555543
No 54
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=97.67 E-value=3.7e-06 Score=80.84 Aligned_cols=91 Identities=21% Similarity=0.202 Sum_probs=63.5
Q ss_pred hhccCcccEEEecCccccc-----cCccccCCCCCceeecCCCccc----ccc-------hhhhhccccceeecCCCccc
Q 002284 85 LLKLQRLRVFSLRGYLISE-----VPDSIGDLSYLRYLNLSGTQIR----TLP-------ESVNKLYNLHTLLLEGCREL 148 (943)
Q Consensus 85 ~~~l~~L~~L~L~~n~i~~-----lp~~~~~l~~L~~L~Ls~n~i~----~lp-------~~i~~L~~L~~L~L~~n~~~ 148 (943)
+..+..+..+|||+|.|+. +...|.+-.+|+.-+++.-... ++| .++-++++|+..+||.|.+-
T Consensus 26 l~~~d~~~evdLSGNtigtEA~e~l~~~ia~~~~L~vvnfsd~ftgr~kde~~~~L~~Ll~aLlkcp~l~~v~LSDNAfg 105 (388)
T COG5238 26 LEMMDELVEVDLSGNTIGTEAMEELCNVIANVRNLRVVNFSDAFTGRDKDELYSNLVMLLKALLKCPRLQKVDLSDNAFG 105 (388)
T ss_pred HHhhcceeEEeccCCcccHHHHHHHHHHHhhhcceeEeehhhhhhcccHHHHHHHHHHHHHHHhcCCcceeeeccccccC
Confidence 3357888888888888763 4455666778888888764222 233 34567889999999998755
Q ss_pred ccccHH----HhccccCceEEcCCCCCCcccc
Q 002284 149 KKKCAD----MGNLIKLHHLNNSNTDSLEEMP 176 (943)
Q Consensus 149 ~~~p~~----~~~L~~L~~L~l~~n~~~~~~p 176 (943)
...|+. |+.-+.|.||.+++|. ++.+.
T Consensus 106 ~~~~e~L~d~is~~t~l~HL~l~NnG-lGp~a 136 (388)
T COG5238 106 SEFPEELGDLISSSTDLVHLKLNNNG-LGPIA 136 (388)
T ss_pred cccchHHHHHHhcCCCceeEEeecCC-CCccc
Confidence 554443 6677889999999887 66554
No 55
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=97.67 E-value=6.3e-06 Score=70.77 Aligned_cols=101 Identities=20% Similarity=0.222 Sum_probs=85.1
Q ss_pred ccCcccEEEecCccccccCcc---ccCCCCCceeecCCCcccccchhhh-hccccceeecCCCcccccccHHHhccccCc
Q 002284 87 KLQRLRVFSLRGYLISEVPDS---IGDLSYLRYLNLSGTQIRTLPESVN-KLYNLHTLLLEGCRELKKKCADMGNLIKLH 162 (943)
Q Consensus 87 ~l~~L~~L~L~~n~i~~lp~~---~~~l~~L~~L~Ls~n~i~~lp~~i~-~L~~L~~L~L~~n~~~~~~p~~~~~L~~L~ 162 (943)
.-+.+-.+||+.+.+..+++. +....+|...+|++|.++..|+.|. +.+-.++|++++|. +..+|.++..++.|+
T Consensus 25 dakE~h~ldLssc~lm~i~davy~l~~~~el~~i~ls~N~fk~fp~kft~kf~t~t~lNl~~ne-isdvPeE~Aam~aLr 103 (177)
T KOG4579|consen 25 DAKELHFLDLSSCQLMYIADAVYMLSKGYELTKISLSDNGFKKFPKKFTIKFPTATTLNLANNE-ISDVPEELAAMPALR 103 (177)
T ss_pred HHHHhhhcccccchhhHHHHHHHHHhCCceEEEEecccchhhhCCHHHhhccchhhhhhcchhh-hhhchHHHhhhHHhh
Confidence 345667789999998877654 4667788888999999999998775 45699999999985 889999999999999
Q ss_pred eEEcCCCCCCccccccccccccccccC
Q 002284 163 HLNNSNTDSLEEMPLGIGKLTCLLTLC 189 (943)
Q Consensus 163 ~L~l~~n~~~~~~p~~~~~L~~L~~L~ 189 (943)
.|+++.|. +...|+.|..|.+|-.|+
T Consensus 104 ~lNl~~N~-l~~~p~vi~~L~~l~~Ld 129 (177)
T KOG4579|consen 104 SLNLRFNP-LNAEPRVIAPLIKLDMLD 129 (177)
T ss_pred hcccccCc-cccchHHHHHHHhHHHhc
Confidence 99999999 788888888888877774
No 56
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=97.60 E-value=2.4e-06 Score=93.25 Aligned_cols=80 Identities=26% Similarity=0.255 Sum_probs=42.9
Q ss_pred ccCcccEEEecCccccccCccccCCCCCceeecCCCcccccch-hhhhccccceeecCCCcccccccHHHhccccCceEE
Q 002284 87 KLQRLRVFSLRGYLISEVPDSIGDLSYLRYLNLSGTQIRTLPE-SVNKLYNLHTLLLEGCRELKKKCADMGNLIKLHHLN 165 (943)
Q Consensus 87 ~l~~L~~L~L~~n~i~~lp~~~~~l~~L~~L~Ls~n~i~~lp~-~i~~L~~L~~L~L~~n~~~~~~p~~~~~L~~L~~L~ 165 (943)
-+++|+.|+|++|+++... .+..+++|++|||++|.++.+|. ....+. |+.|.+++|. +..+ .++.+|.+|+.||
T Consensus 185 ll~ale~LnLshNk~~~v~-~Lr~l~~LkhLDlsyN~L~~vp~l~~~gc~-L~~L~lrnN~-l~tL-~gie~LksL~~LD 260 (1096)
T KOG1859|consen 185 LLPALESLNLSHNKFTKVD-NLRRLPKLKHLDLSYNCLRHVPQLSMVGCK-LQLLNLRNNA-LTTL-RGIENLKSLYGLD 260 (1096)
T ss_pred HHHHhhhhccchhhhhhhH-HHHhcccccccccccchhccccccchhhhh-heeeeecccH-HHhh-hhHHhhhhhhccc
Confidence 4455566666666655543 45556666666666666655553 122222 6666666553 3333 3455666666666
Q ss_pred cCCCC
Q 002284 166 NSNTD 170 (943)
Q Consensus 166 l~~n~ 170 (943)
+++|-
T Consensus 261 lsyNl 265 (1096)
T KOG1859|consen 261 LSYNL 265 (1096)
T ss_pred hhHhh
Confidence 66654
No 57
>KOG1947 consensus Leucine rich repeat proteins, some proteins contain F-box [General function prediction only]
Probab=97.29 E-value=4.7e-05 Score=87.54 Aligned_cols=38 Identities=18% Similarity=0.155 Sum_probs=23.9
Q ss_pred CCCccEEEEecCCCCCcCccccccCCCCCccEEEeecC
Q 002284 562 PSQLRVISIWDSGALKFLPEAWMLDNNSSLEILDIRHC 599 (943)
Q Consensus 562 ~~~L~~L~l~~~~~l~~~~~~~~~~~l~~L~~L~l~~n 599 (943)
.+.|+.+.+.+|..+...........++.|+.|++++|
T Consensus 187 ~~~L~~l~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~ 224 (482)
T KOG1947|consen 187 CPLLKRLSLSGCSKITDDSLDALALKCPNLEELDLSGC 224 (482)
T ss_pred CchhhHhhhcccccCChhhHHHHHhhCchhheecccCc
Confidence 46777788887776665221111346788888888774
No 58
>KOG1644 consensus U2-associated snRNP A' protein [RNA processing and modification]
Probab=97.23 E-value=0.00041 Score=64.39 Aligned_cols=102 Identities=22% Similarity=0.173 Sum_probs=54.2
Q ss_pred hhhccccccccCCCccccCCCCceeeeeEeecCccccccchhhhhhcccccCeEEeecCCCcccchhhhhhhcCccceec
Q 002284 440 LYKDISNQMFLGGPLKLQLPKLDELDISIIIDGLSYIWQNETQLLQDIATLKRLKIERCPKLQFLEEEDQWQFGLSFRLE 519 (943)
Q Consensus 440 ~~l~ls~n~l~~~~~~~~l~~L~~L~Ls~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~~l~~l~~~~~~~~~~l~~L~ 519 (943)
..+|+++|.+.....+..++.|.+|.++ .+.|..+.+.....+++|+.|.+.+|+ +..+.+-.+ +..+|+|+
T Consensus 45 d~iDLtdNdl~~l~~lp~l~rL~tLll~-----nNrIt~I~p~L~~~~p~l~~L~LtnNs-i~~l~dl~p--La~~p~L~ 116 (233)
T KOG1644|consen 45 DAIDLTDNDLRKLDNLPHLPRLHTLLLN-----NNRITRIDPDLDTFLPNLKTLILTNNS-IQELGDLDP--LASCPKLE 116 (233)
T ss_pred ceecccccchhhcccCCCccccceEEec-----CCcceeeccchhhhccccceEEecCcc-hhhhhhcch--hccCCccc
Confidence 3456666666665555566666666665 444555555555566666666666664 333332221 55556666
Q ss_pred eEEEecCCCcCcc---chhccCCCCcCeeeccC
Q 002284 520 HLELINCQDLEKL---PKSLLSLSSLTEMRIHN 549 (943)
Q Consensus 520 ~L~l~~~~~~~~~---~~~~~~l~~L~~L~L~~ 549 (943)
+|.+-+|+....- -..+..+++|+.||..+
T Consensus 117 ~Ltll~Npv~~k~~YR~yvl~klp~l~~LDF~k 149 (233)
T KOG1644|consen 117 YLTLLGNPVEHKKNYRLYVLYKLPSLRTLDFQK 149 (233)
T ss_pred eeeecCCchhcccCceeEEEEecCcceEeehhh
Confidence 6666665433211 11234455555555544
No 59
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.21 E-value=9.5e-05 Score=72.42 Aligned_cols=88 Identities=20% Similarity=0.203 Sum_probs=52.3
Q ss_pred chhhhccCcccEEEecCccccccC--ccc-cCCCCCceeecCCCcccc---cchhhhhccccceeecCCCcccccccHHH
Q 002284 82 LPRLLKLQRLRVFSLRGYLISEVP--DSI-GDLSYLRYLNLSGTQIRT---LPESVNKLYNLHTLLLEGCRELKKKCADM 155 (943)
Q Consensus 82 ~~~~~~l~~L~~L~L~~n~i~~lp--~~~-~~l~~L~~L~Ls~n~i~~---lp~~i~~L~~L~~L~L~~n~~~~~~p~~~ 155 (943)
+-+++....+..|.+.++.|...- ..| ...++++.|||.+|.|+. |-.-..+|++|++|+++.|.....+ ...
T Consensus 38 ~~~v~s~ra~ellvln~~~id~~gd~~~~~~~~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I-~~l 116 (418)
T KOG2982|consen 38 YLGVSSLRALELLVLNGSIIDNEGDVMLFGSSVTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDI-KSL 116 (418)
T ss_pred eeeeccccchhhheecCCCCCcchhHHHHHHHhhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCcc-ccC
Confidence 344445556667777777665542 233 456678888888888773 3333467788888888877532221 111
Q ss_pred -hccccCceEEcCCCC
Q 002284 156 -GNLIKLHHLNNSNTD 170 (943)
Q Consensus 156 -~~L~~L~~L~l~~n~ 170 (943)
..+.+|+.|-+.+..
T Consensus 117 p~p~~nl~~lVLNgT~ 132 (418)
T KOG2982|consen 117 PLPLKNLRVLVLNGTG 132 (418)
T ss_pred cccccceEEEEEcCCC
Confidence 345567777666655
No 60
>KOG3665 consensus ZYG-1-like serine/threonine protein kinases [General function prediction only]
Probab=97.19 E-value=0.00034 Score=81.06 Aligned_cols=106 Identities=25% Similarity=0.288 Sum_probs=51.5
Q ss_pred ccccEEeecccCCCCCCcchhccchhhh-ccCcccEEEecCccccc--cCccccCCCCCceeecCCCcccccchhhhhcc
Q 002284 59 QHLRTLLPVTLLSSRPGYLARSILPRLL-KLQRLRVFSLRGYLISE--VPDSIGDLSYLRYLNLSGTQIRTLPESVNKLY 135 (943)
Q Consensus 59 ~~Lr~L~~~~~~~l~~~~~~~~~~~~~~-~l~~L~~L~L~~n~i~~--lp~~~~~l~~L~~L~Ls~n~i~~lp~~i~~L~ 135 (943)
.+||.|.+.+.. .+...-|..++ .+|.||.|.+++-.+.. +-.-..++++|+.||+|+++|+.+ ..+++|+
T Consensus 122 ~nL~~LdI~G~~-----~~s~~W~~kig~~LPsL~sL~i~~~~~~~~dF~~lc~sFpNL~sLDIS~TnI~nl-~GIS~Lk 195 (699)
T KOG3665|consen 122 QNLQHLDISGSE-----LFSNGWPKKIGTMLPSLRSLVISGRQFDNDDFSQLCASFPNLRSLDISGTNISNL-SGISRLK 195 (699)
T ss_pred HhhhhcCccccc-----hhhccHHHHHhhhCcccceEEecCceecchhHHHHhhccCccceeecCCCCccCc-HHHhccc
Confidence 455555554432 12333344445 55666666665544321 112224555666666666666655 5556666
Q ss_pred ccceeecCCCcccc-cccHHHhccccCceEEcCCCC
Q 002284 136 NLHTLLLEGCRELK-KKCADMGNLIKLHHLNNSNTD 170 (943)
Q Consensus 136 ~L~~L~L~~n~~~~-~~p~~~~~L~~L~~L~l~~n~ 170 (943)
+||+|.+.+=.+.. ..-..+.+|++|++||+|...
T Consensus 196 nLq~L~mrnLe~e~~~~l~~LF~L~~L~vLDIS~~~ 231 (699)
T KOG3665|consen 196 NLQVLSMRNLEFESYQDLIDLFNLKKLRVLDISRDK 231 (699)
T ss_pred cHHHHhccCCCCCchhhHHHHhcccCCCeeeccccc
Confidence 66666555421110 111235556666666666544
No 61
>KOG1644 consensus U2-associated snRNP A' protein [RNA processing and modification]
Probab=97.17 E-value=0.00043 Score=64.22 Aligned_cols=104 Identities=22% Similarity=0.193 Sum_probs=77.7
Q ss_pred ccCcccEEEecCccccccCccccCCCCCceeecCCCcccccchhh-hhccccceeecCCCccccccc--HHHhccccCce
Q 002284 87 KLQRLRVFSLRGYLISEVPDSIGDLSYLRYLNLSGTQIRTLPESV-NKLYNLHTLLLEGCRELKKKC--ADMGNLIKLHH 163 (943)
Q Consensus 87 ~l~~L~~L~L~~n~i~~lp~~~~~l~~L~~L~Ls~n~i~~lp~~i-~~L~~L~~L~L~~n~~~~~~p--~~~~~L~~L~~ 163 (943)
-+...-.+||++|.+..++ .|..+..|.+|.|..|+|+.|-+.+ .-+++|++|.|.+|++ ..+. ..+..+++|++
T Consensus 40 ~~d~~d~iDLtdNdl~~l~-~lp~l~rL~tLll~nNrIt~I~p~L~~~~p~l~~L~LtnNsi-~~l~dl~pLa~~p~L~~ 117 (233)
T KOG1644|consen 40 TLDQFDAIDLTDNDLRKLD-NLPHLPRLHTLLLNNNRITRIDPDLDTFLPNLKTLILTNNSI-QELGDLDPLASCPKLEY 117 (233)
T ss_pred cccccceecccccchhhcc-cCCCccccceEEecCCcceeeccchhhhccccceEEecCcch-hhhhhcchhccCCccce
Confidence 4567778999999988875 5788999999999999999995555 4567899999999863 3332 23778889999
Q ss_pred EEcCCCCCCccccc----cccccccccccCceEe
Q 002284 164 LNNSNTDSLEEMPL----GIGKLTCLLTLCNFVV 193 (943)
Q Consensus 164 L~l~~n~~~~~~p~----~~~~L~~L~~L~~~~~ 193 (943)
|.+-+|. ...-+. -+..+++|+.|+...+
T Consensus 118 Ltll~Np-v~~k~~YR~yvl~klp~l~~LDF~kV 150 (233)
T KOG1644|consen 118 LTLLGNP-VEHKKNYRLYVLYKLPSLRTLDFQKV 150 (233)
T ss_pred eeecCCc-hhcccCceeEEEEecCcceEeehhhh
Confidence 9999888 444442 2677788887754443
No 62
>KOG1947 consensus Leucine rich repeat proteins, some proteins contain F-box [General function prediction only]
Probab=97.17 E-value=2.4e-05 Score=89.87 Aligned_cols=234 Identities=21% Similarity=0.264 Sum_probs=117.2
Q ss_pred ccccEEEeecCCCchh--hHhhhcccccccEEEeecc-CCccccc----ccccCCCCccEEeccCCCCCcccCcC--Ccc
Q 002284 678 QALKFLSIWHCSKLES--IVERLDNKISLEVIEIVSC-ENLKMLP----HGLHKLWHLQEIDIQDCENLVSFPEG--GLL 748 (943)
Q Consensus 678 ~~L~~L~l~~~~~l~~--~~~~~~~l~~L~~L~l~~~-~~~~~~p----~~~~~l~~L~~L~l~~~~~l~~~p~~--~~~ 748 (943)
+.|+.+.+.+|..+.. +......++.|+.|++++| ......+ .....+++|+.|++++|..++..--. ...
T Consensus 188 ~~L~~l~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~L~~l~l~~~~~isd~~l~~l~~~ 267 (482)
T KOG1947|consen 188 PLLKRLSLSGCSKITDDSLDALALKCPNLEELDLSGCCLLITLSPLLLLLLLSICRKLKSLDLSGCGLVTDIGLSALASR 267 (482)
T ss_pred chhhHhhhcccccCChhhHHHHHhhCchhheecccCcccccccchhHhhhhhhhcCCcCccchhhhhccCchhHHHHHhh
Confidence 5788888888887775 5566777888888888773 2222222 22344677788888877644332211 112
Q ss_pred ccccceeeeccccCCcc--CCCcCCCCCCCCceeecCCCCCccc--cCCCCCCCCcceEEecCC---cchhccccccCCC
Q 002284 749 SAKLKRLVIYGCKKLEA--LPEGMHNLSSLQYLTIGGVPSLLCF--TEDGLFPTNLHSLEIDGM---KIWKSLMQLGGFH 821 (943)
Q Consensus 749 l~~L~~L~l~~~~~l~~--~p~~~~~l~~L~~L~l~~~~~l~~~--~~~~~~~~~L~~L~l~~c---~~l~~~~~~~~~~ 821 (943)
+++|+.|.+.+|..+.. +-.....++.|++|++++|..+..- .......++|+.|.+..+ ..++.........
T Consensus 268 c~~L~~L~l~~c~~lt~~gl~~i~~~~~~L~~L~l~~c~~~~d~~l~~~~~~c~~l~~l~~~~~~~c~~l~~~~l~~~~~ 347 (482)
T KOG1947|consen 268 CPNLETLSLSNCSNLTDEGLVSIAERCPSLRELDLSGCHGLTDSGLEALLKNCPNLRELKLLSLNGCPSLTDLSLSGLLT 347 (482)
T ss_pred CCCcceEccCCCCccchhHHHHHHHhcCcccEEeeecCccchHHHHHHHHHhCcchhhhhhhhcCCCccHHHHHHHHhhc
Confidence 66777777777764211 1112255677777777777765221 111112344444333332 2333332211111
Q ss_pred CC-CCccEEEecCCCCcCcccCcccccccCCCCCCcc-EEEeecCCCC-ccccccc-CCCCCCeEeecCCCCCccCCCCC
Q 002284 822 RY-TSLRRLAISGCDEDMVSFPLEDIRLGTTLPACLT-QLEIFNFPNL-ERLSSSI-CDQNLTSLKLTNCPKLKYFPEKG 897 (943)
Q Consensus 822 ~l-~~L~~L~l~~c~~~~~~~~~~~~~~~~~~~~~L~-~L~l~~~~~l-~~l~~~~-~~~~L~~L~l~~C~~L~~~~~~~ 897 (943)
.. ..++.+.+.+| ..++....... ...... .+.+.+||.+ ..+.... .+.+++.|.+..|...+.-.-..
T Consensus 348 ~~~d~~~~~~~~~~-~~l~~~~l~~~-----~~~~~~~~~~l~gc~~l~~~l~~~~~~~~~l~~L~l~~~~~~t~~~l~~ 421 (482)
T KOG1947|consen 348 LTSDDLAELILRSC-PKLTDLSLSYC-----GISDLGLELSLRGCPNLTESLELRLCRSDSLRVLNLSDCRLVTDKGLRC 421 (482)
T ss_pred cCchhHhHHHHhcC-CCcchhhhhhh-----hccCcchHHHhcCCcccchHHHHHhccCCccceEecccCccccccchHH
Confidence 11 14555555553 33322221110 011111 3555566666 3332211 22336777777777665532111
Q ss_pred C---CCccceEeecCCchHHHHh
Q 002284 898 L---PASLLRLEIKKCPLIEKMC 917 (943)
Q Consensus 898 l---~~sL~~L~i~~C~~l~~~~ 917 (943)
. ...++.+++.+|+.+....
T Consensus 422 ~~~~~~~~~~l~~~~~~~~~~~~ 444 (482)
T KOG1947|consen 422 LADSCSNLKDLDLSGCRVITLKS 444 (482)
T ss_pred HhhhhhccccCCccCcccccchh
Confidence 1 3456777777777666554
No 63
>KOG3665 consensus ZYG-1-like serine/threonine protein kinases [General function prediction only]
Probab=96.99 E-value=0.00043 Score=80.26 Aligned_cols=105 Identities=23% Similarity=0.258 Sum_probs=69.5
Q ss_pred ccCcccEEEecCcccc--ccCccc-cCCCCCceeecCCCccc--ccchhhhhccccceeecCCCcccccccHHHhccccC
Q 002284 87 KLQRLRVFSLRGYLIS--EVPDSI-GDLSYLRYLNLSGTQIR--TLPESVNKLYNLHTLLLEGCRELKKKCADMGNLIKL 161 (943)
Q Consensus 87 ~l~~L~~L~L~~n~i~--~lp~~~-~~l~~L~~L~Ls~n~i~--~lp~~i~~L~~L~~L~L~~n~~~~~~p~~~~~L~~L 161 (943)
.-.+|+.||+++...- .-|..+ ..|+.||.|.+++-.+. +.-.-..++++|..||+|+++ +..+ .++++|++|
T Consensus 120 sr~nL~~LdI~G~~~~s~~W~~kig~~LPsL~sL~i~~~~~~~~dF~~lc~sFpNL~sLDIS~Tn-I~nl-~GIS~LknL 197 (699)
T KOG3665|consen 120 SRQNLQHLDISGSELFSNGWPKKIGTMLPSLRSLVISGRQFDNDDFSQLCASFPNLRSLDISGTN-ISNL-SGISRLKNL 197 (699)
T ss_pred HHHhhhhcCccccchhhccHHHHHhhhCcccceEEecCceecchhHHHHhhccCccceeecCCCC-ccCc-HHHhccccH
Confidence 5678888888886521 224444 45788888888876543 222345678888888888865 4544 678888888
Q ss_pred ceEEcCCCCCCcccc--ccccccccccccCceEec
Q 002284 162 HHLNNSNTDSLEEMP--LGIGKLTCLLTLCNFVVG 194 (943)
Q Consensus 162 ~~L~l~~n~~~~~~p--~~~~~L~~L~~L~~~~~~ 194 (943)
+.|.+.+-. ...-. .++.+|++|+.|+.....
T Consensus 198 q~L~mrnLe-~e~~~~l~~LF~L~~L~vLDIS~~~ 231 (699)
T KOG3665|consen 198 QVLSMRNLE-FESYQDLIDLFNLKKLRVLDISRDK 231 (699)
T ss_pred HHHhccCCC-CCchhhHHHHhcccCCCeeeccccc
Confidence 888877655 33222 246677788877655443
No 64
>PF00560 LRR_1: Leucine Rich Repeat; InterPro: IPR001611 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. ; GO: 0005515 protein binding; PDB: 4ECO_B 2A0Z_A 3ULU_A 1ZIW_A 3ULV_A 1DCE_C 1LTX_A 3J0A_B 3A79_B 4FCG_A ....
Probab=96.63 E-value=0.00075 Score=38.77 Aligned_cols=19 Identities=42% Similarity=0.882 Sum_probs=9.5
Q ss_pred CceeecCCCcccccchhhh
Q 002284 114 LRYLNLSGTQIRTLPESVN 132 (943)
Q Consensus 114 L~~L~Ls~n~i~~lp~~i~ 132 (943)
||+|||++|+|+.+|++|+
T Consensus 2 L~~Ldls~n~l~~ip~~~~ 20 (22)
T PF00560_consen 2 LEYLDLSGNNLTSIPSSFS 20 (22)
T ss_dssp ESEEEETSSEESEEGTTTT
T ss_pred ccEEECCCCcCEeCChhhc
Confidence 4555555555555554443
No 65
>KOG2123 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.46 E-value=0.00053 Score=66.71 Aligned_cols=78 Identities=27% Similarity=0.262 Sum_probs=55.0
Q ss_pred ccCcccEEEecCccccccCccccCCCCCceeecCCCcccccc--hhhhhccccceeecCCCcccccccH-----HHhccc
Q 002284 87 KLQRLRVFSLRGYLISEVPDSIGDLSYLRYLNLSGTQIRTLP--ESVNKLYNLHTLLLEGCRELKKKCA-----DMGNLI 159 (943)
Q Consensus 87 ~l~~L~~L~L~~n~i~~lp~~~~~l~~L~~L~Ls~n~i~~lp--~~i~~L~~L~~L~L~~n~~~~~~p~-----~~~~L~ 159 (943)
+|+.|+||.||-|.|+.+ ..+..+++|+.|+|..|.|..+- ..+.++++|++|.|..|.-.+.-+. .+.-|+
T Consensus 39 kMp~lEVLsLSvNkIssL-~pl~rCtrLkElYLRkN~I~sldEL~YLknlpsLr~LWL~ENPCc~~ag~nYR~~VLR~LP 117 (388)
T KOG2123|consen 39 KMPLLEVLSLSVNKISSL-APLQRCTRLKELYLRKNCIESLDELEYLKNLPSLRTLWLDENPCCGEAGQNYRRKVLRVLP 117 (388)
T ss_pred hcccceeEEeeccccccc-hhHHHHHHHHHHHHHhcccccHHHHHHHhcCchhhhHhhccCCcccccchhHHHHHHHHcc
Confidence 788888888888888877 34777888888888888887773 3456777888888877765554443 244556
Q ss_pred cCceEE
Q 002284 160 KLHHLN 165 (943)
Q Consensus 160 ~L~~L~ 165 (943)
+|+.||
T Consensus 118 nLkKLD 123 (388)
T KOG2123|consen 118 NLKKLD 123 (388)
T ss_pred cchhcc
Confidence 666654
No 66
>KOG2123 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.33 E-value=0.00052 Score=66.76 Aligned_cols=104 Identities=20% Similarity=0.207 Sum_probs=80.7
Q ss_pred ccCcccEEEecCccccccCccccCCCCCceeecCCCcccccchhhhhccccceeecCCCcccccccH--HHhccccCceE
Q 002284 87 KLQRLRVFSLRGYLISEVPDSIGDLSYLRYLNLSGTQIRTLPESVNKLYNLHTLLLEGCRELKKKCA--DMGNLIKLHHL 164 (943)
Q Consensus 87 ~l~~L~~L~L~~n~i~~lp~~~~~l~~L~~L~Ls~n~i~~lp~~i~~L~~L~~L~L~~n~~~~~~p~--~~~~L~~L~~L 164 (943)
.+.+.+.|++-++.+..+ .-..+++.|++|.||-|.|+.+ +.+..+++|+.|+|..|. +..+-+ -+.++++|+.|
T Consensus 17 dl~~vkKLNcwg~~L~DI-sic~kMp~lEVLsLSvNkIssL-~pl~rCtrLkElYLRkN~-I~sldEL~YLknlpsLr~L 93 (388)
T KOG2123|consen 17 DLENVKKLNCWGCGLDDI-SICEKMPLLEVLSLSVNKISSL-APLQRCTRLKELYLRKNC-IESLDELEYLKNLPSLRTL 93 (388)
T ss_pred HHHHhhhhcccCCCccHH-HHHHhcccceeEEeeccccccc-hhHHHHHHHHHHHHHhcc-cccHHHHHHHhcCchhhhH
Confidence 567788899999988876 2347899999999999999999 568999999999999986 444432 37889999999
Q ss_pred EcCCCCCCccccc-----cccccccccccCceEe
Q 002284 165 NNSNTDSLEEMPL-----GIGKLTCLLTLCNFVV 193 (943)
Q Consensus 165 ~l~~n~~~~~~p~-----~~~~L~~L~~L~~~~~ 193 (943)
-|..|.=.+.-+. .+.-|++|+.|++..+
T Consensus 94 WL~ENPCc~~ag~nYR~~VLR~LPnLkKLDnv~V 127 (388)
T KOG2123|consen 94 WLDENPCCGEAGQNYRRKVLRVLPNLKKLDNVPV 127 (388)
T ss_pred hhccCCcccccchhHHHHHHHHcccchhccCccc
Confidence 9998874454443 2566788888865443
No 67
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=96.29 E-value=0.0029 Score=61.55 Aligned_cols=83 Identities=19% Similarity=0.200 Sum_probs=58.2
Q ss_pred ccccCCCCCceeecCCCccc-----ccchhhhhccccceeecCCCccccc----cc-------HHHhccccCceEEcCCC
Q 002284 106 DSIGDLSYLRYLNLSGTQIR-----TLPESVNKLYNLHTLLLEGCRELKK----KC-------ADMGNLIKLHHLNNSNT 169 (943)
Q Consensus 106 ~~~~~l~~L~~L~Ls~n~i~-----~lp~~i~~L~~L~~L~L~~n~~~~~----~p-------~~~~~L~~L~~L~l~~n 169 (943)
..+..+..+..++||+|.|. .+...|.+-.+|++.+++.- +.+. +| ..+-++++|+..++++|
T Consensus 24 eel~~~d~~~evdLSGNtigtEA~e~l~~~ia~~~~L~vvnfsd~-ftgr~kde~~~~L~~Ll~aLlkcp~l~~v~LSDN 102 (388)
T COG5238 24 EELEMMDELVEVDLSGNTIGTEAMEELCNVIANVRNLRVVNFSDA-FTGRDKDELYSNLVMLLKALLKCPRLQKVDLSDN 102 (388)
T ss_pred HHHHhhcceeEEeccCCcccHHHHHHHHHHHhhhcceeEeehhhh-hhcccHHHHHHHHHHHHHHHhcCCcceeeecccc
Confidence 33455788999999999887 35556777889999988863 2322 23 34567899999999999
Q ss_pred CCCcccccc----ccccccccccC
Q 002284 170 DSLEEMPLG----IGKLTCLLTLC 189 (943)
Q Consensus 170 ~~~~~~p~~----~~~L~~L~~L~ 189 (943)
.+....|.. |++-+.|.+|.
T Consensus 103 Afg~~~~e~L~d~is~~t~l~HL~ 126 (388)
T COG5238 103 AFGSEFPEELGDLISSSTDLVHLK 126 (388)
T ss_pred ccCcccchHHHHHHhcCCCceeEE
Confidence 865556643 45556666663
No 68
>PF00560 LRR_1: Leucine Rich Repeat; InterPro: IPR001611 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. ; GO: 0005515 protein binding; PDB: 4ECO_B 2A0Z_A 3ULU_A 1ZIW_A 3ULV_A 1DCE_C 1LTX_A 3J0A_B 3A79_B 4FCG_A ....
Probab=96.11 E-value=0.0036 Score=35.94 Aligned_cols=22 Identities=27% Similarity=0.570 Sum_probs=18.7
Q ss_pred cccEEEecCccccccCccccCC
Q 002284 90 RLRVFSLRGYLISEVPDSIGDL 111 (943)
Q Consensus 90 ~L~~L~L~~n~i~~lp~~~~~l 111 (943)
+|++|||++|.++.+|.+|++|
T Consensus 1 ~L~~Ldls~n~l~~ip~~~~~l 22 (22)
T PF00560_consen 1 NLEYLDLSGNNLTSIPSSFSNL 22 (22)
T ss_dssp TESEEEETSSEESEEGTTTTT-
T ss_pred CccEEECCCCcCEeCChhhcCC
Confidence 5899999999999999888754
No 69
>KOG2739 consensus Leucine-rich acidic nuclear protein [Cell cycle control, cell division, chromosome partitioning; General function prediction only]
Probab=95.95 E-value=0.0042 Score=60.61 Aligned_cols=82 Identities=23% Similarity=0.296 Sum_probs=33.2
Q ss_pred ccCcccEEEecCccccccCccccCCCCCceeecCCC--ccc-ccchhhhhccccceeecCCCccccccc--HHHhccccC
Q 002284 87 KLQRLRVFSLRGYLISEVPDSIGDLSYLRYLNLSGT--QIR-TLPESVNKLYNLHTLLLEGCRELKKKC--ADMGNLIKL 161 (943)
Q Consensus 87 ~l~~L~~L~L~~n~i~~lp~~~~~l~~L~~L~Ls~n--~i~-~lp~~i~~L~~L~~L~L~~n~~~~~~p--~~~~~L~~L 161 (943)
.+..|+.|++.+..++.+ ..|..|++|++|.++.| ++. .++.-...+++|++|++++|. +..+- .....+.+|
T Consensus 41 ~~~~le~ls~~n~gltt~-~~~P~Lp~LkkL~lsdn~~~~~~~l~vl~e~~P~l~~l~ls~Nk-i~~lstl~pl~~l~nL 118 (260)
T KOG2739|consen 41 EFVELELLSVINVGLTTL-TNFPKLPKLKKLELSDNYRRVSGGLEVLAEKAPNLKVLNLSGNK-IKDLSTLRPLKELENL 118 (260)
T ss_pred cccchhhhhhhccceeec-ccCCCcchhhhhcccCCcccccccceehhhhCCceeEEeecCCc-cccccccchhhhhcch
Confidence 334444444444433332 22334445555555555 222 222222333555555555543 21110 113344445
Q ss_pred ceEEcCCCC
Q 002284 162 HHLNNSNTD 170 (943)
Q Consensus 162 ~~L~l~~n~ 170 (943)
..|++..|.
T Consensus 119 ~~Ldl~n~~ 127 (260)
T KOG2739|consen 119 KSLDLFNCS 127 (260)
T ss_pred hhhhcccCC
Confidence 555555544
No 70
>PF13306 LRR_5: Leucine rich repeats (6 copies); PDB: 3ZYJ_A 3V47_B 3V44_A 3ZYN_A 3ZYO_A 3SB4_A.
Probab=95.55 E-value=0.035 Score=50.13 Aligned_cols=117 Identities=10% Similarity=0.235 Sum_probs=56.4
Q ss_pred cccccccccEEeecccCCCCCCcchhccchhhh-ccCcccEEEecCccccccC-ccccCCCCCceeecCCCcccccc-hh
Q 002284 54 DLYDIQHLRTLLPVTLLSSRPGYLARSILPRLL-KLQRLRVFSLRGYLISEVP-DSIGDLSYLRYLNLSGTQIRTLP-ES 130 (943)
Q Consensus 54 ~~~~~~~Lr~L~~~~~~~l~~~~~~~~~~~~~~-~l~~L~~L~L~~n~i~~lp-~~~~~l~~L~~L~Ls~n~i~~lp-~~ 130 (943)
.|.++++|+.+.+... ...+....| .++.|+.+.+..+ +..++ ..|.++..|+++.+.. .+..++ ..
T Consensus 7 ~F~~~~~l~~i~~~~~--------~~~I~~~~F~~~~~l~~i~~~~~-~~~i~~~~F~~~~~l~~i~~~~-~~~~i~~~~ 76 (129)
T PF13306_consen 7 AFYNCSNLESITFPNT--------IKKIGENAFSNCTSLKSINFPNN-LTSIGDNAFSNCKSLESITFPN-NLKSIGDNA 76 (129)
T ss_dssp TTTT-TT--EEEETST----------EE-TTTTTT-TT-SEEEESST-TSCE-TTTTTT-TT-EEEEETS-TT-EE-TTT
T ss_pred HHhCCCCCCEEEECCC--------eeEeChhhccccccccccccccc-ccccceeeeecccccccccccc-ccccccccc
Confidence 4556667777765432 345666666 7777888888764 66664 4567777788888865 566664 45
Q ss_pred hhhccccceeecCCCccccccc-HHHhccccCceEEcCCCCCCcccccc-ccccccc
Q 002284 131 VNKLYNLHTLLLEGCRELKKKC-ADMGNLIKLHHLNNSNTDSLEEMPLG-IGKLTCL 185 (943)
Q Consensus 131 i~~L~~L~~L~L~~n~~~~~~p-~~~~~L~~L~~L~l~~n~~~~~~p~~-~~~L~~L 185 (943)
|...++|+.+++..+ +..++ ..|.+. +|+.+.+..+ ...++.. |.+.++|
T Consensus 77 F~~~~~l~~i~~~~~--~~~i~~~~f~~~-~l~~i~~~~~--~~~i~~~~F~~~~~l 128 (129)
T PF13306_consen 77 FSNCTNLKNIDIPSN--ITEIGSSSFSNC-NLKEINIPSN--ITKIEENAFKNCTKL 128 (129)
T ss_dssp TTT-TTECEEEETTT---BEEHTTTTTT--T--EEE-TTB---SS----GGG-----
T ss_pred ccccccccccccCcc--ccEEchhhhcCC-CceEEEECCC--ccEECCccccccccC
Confidence 667788888887654 33333 346666 7777777653 3444443 5544444
No 71
>KOG0473 consensus Leucine-rich repeat protein [Function unknown]
Probab=95.51 E-value=0.00092 Score=63.28 Aligned_cols=86 Identities=15% Similarity=0.167 Sum_probs=76.5
Q ss_pred hhhccCcccEEEecCccccccCccccCCCCCceeecCCCcccccchhhhhccccceeecCCCcccccccHHHhccccCce
Q 002284 84 RLLKLQRLRVFSLRGYLISEVPDSIGDLSYLRYLNLSGTQIRTLPESVNKLYNLHTLLLEGCRELKKKCADMGNLIKLHH 163 (943)
Q Consensus 84 ~~~~l~~L~~L~L~~n~i~~lp~~~~~l~~L~~L~Ls~n~i~~lp~~i~~L~~L~~L~L~~n~~~~~~p~~~~~L~~L~~ 163 (943)
++..++..++||++.|++..+-..|+-++.|.-||++.|.|..+|..++.+..++.+++..|. ....|.++++++++++
T Consensus 37 ei~~~kr~tvld~~s~r~vn~~~n~s~~t~~~rl~~sknq~~~~~~d~~q~~e~~~~~~~~n~-~~~~p~s~~k~~~~k~ 115 (326)
T KOG0473|consen 37 EIASFKRVTVLDLSSNRLVNLGKNFSILTRLVRLDLSKNQIKFLPKDAKQQRETVNAASHKNN-HSQQPKSQKKEPHPKK 115 (326)
T ss_pred hhhccceeeeehhhhhHHHhhccchHHHHHHHHHhccHhhHhhChhhHHHHHHHHHHHhhccc-hhhCCccccccCCcch
Confidence 444788899999999998888778888999999999999999999999999999999998875 7888999999999999
Q ss_pred EEcCCCC
Q 002284 164 LNNSNTD 170 (943)
Q Consensus 164 L~l~~n~ 170 (943)
++...+.
T Consensus 116 ~e~k~~~ 122 (326)
T KOG0473|consen 116 NEQKKTE 122 (326)
T ss_pred hhhccCc
Confidence 9998887
No 72
>KOG2739 consensus Leucine-rich acidic nuclear protein [Cell cycle control, cell division, chromosome partitioning; General function prediction only]
Probab=95.15 E-value=0.0086 Score=58.53 Aligned_cols=62 Identities=23% Similarity=0.155 Sum_probs=47.4
Q ss_pred ccCCCCCceeecCCCcccccchhhhhccccceeecCCC--cccccccHHHhccccCceEEcCCCC
Q 002284 108 IGDLSYLRYLNLSGTQIRTLPESVNKLYNLHTLLLEGC--RELKKKCADMGNLIKLHHLNNSNTD 170 (943)
Q Consensus 108 ~~~l~~L~~L~Ls~n~i~~lp~~i~~L~~L~~L~L~~n--~~~~~~p~~~~~L~~L~~L~l~~n~ 170 (943)
.-.+..|+.|++.+..++.+ ..+-.|++|++|.++.| +....++.-..++++|++|++++|+
T Consensus 39 ~d~~~~le~ls~~n~gltt~-~~~P~Lp~LkkL~lsdn~~~~~~~l~vl~e~~P~l~~l~ls~Nk 102 (260)
T KOG2739|consen 39 TDEFVELELLSVINVGLTTL-TNFPKLPKLKKLELSDNYRRVSGGLEVLAEKAPNLKVLNLSGNK 102 (260)
T ss_pred cccccchhhhhhhccceeec-ccCCCcchhhhhcccCCcccccccceehhhhCCceeEEeecCCc
Confidence 34556777777777777666 44558899999999999 5555555556677999999999998
No 73
>PF13504 LRR_7: Leucine rich repeat; PDB: 3OJA_B 3G06_A 1OOK_G 1QYY_G 1SQ0_B 1P9A_G 1GWB_A 1P8V_A 1M0Z_A 1U0N_D ....
Probab=94.93 E-value=0.014 Score=30.90 Aligned_cols=16 Identities=44% Similarity=0.748 Sum_probs=5.9
Q ss_pred CCceeecCCCcccccc
Q 002284 113 YLRYLNLSGTQIRTLP 128 (943)
Q Consensus 113 ~L~~L~Ls~n~i~~lp 128 (943)
+|++|+|++|+++++|
T Consensus 2 ~L~~L~l~~n~L~~lP 17 (17)
T PF13504_consen 2 NLRTLDLSNNRLTSLP 17 (17)
T ss_dssp T-SEEEETSS--SSE-
T ss_pred ccCEEECCCCCCCCCc
Confidence 4455555555544443
No 74
>PF13306 LRR_5: Leucine rich repeats (6 copies); PDB: 3ZYJ_A 3V47_B 3V44_A 3ZYN_A 3ZYO_A 3SB4_A.
Probab=94.23 E-value=0.12 Score=46.46 Aligned_cols=104 Identities=15% Similarity=0.204 Sum_probs=35.1
Q ss_pred hhhcccccCeEEeecCCCcccchhhhhhhcCccceeceEEEecCCCcCccchhccCCCCcCeeeccCCCCCcccCCCCC-
Q 002284 483 LLQDIATLKRLKIERCPKLQFLEEEDQWQFGLSFRLEHLELINCQDLEKLPKSLLSLSSLTEMRIHNCSSLVSFPEAVL- 561 (943)
Q Consensus 483 ~~~~l~~L~~L~l~~~~~l~~l~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~L~~n~~l~~~~~~~~- 561 (943)
.|.+.++|+.+.+.. .++.+.... |..+++|+.+.+.++ ....-..+|..+++++.+.+.+ ....++...+
T Consensus 7 ~F~~~~~l~~i~~~~--~~~~I~~~~---F~~~~~l~~i~~~~~-~~~i~~~~F~~~~~l~~i~~~~--~~~~i~~~~F~ 78 (129)
T PF13306_consen 7 AFYNCSNLESITFPN--TIKKIGENA---FSNCTSLKSINFPNN-LTSIGDNAFSNCKSLESITFPN--NLKSIGDNAFS 78 (129)
T ss_dssp TTTT-TT--EEEETS--T--EE-TTT---TTT-TT-SEEEESST-TSCE-TTTTTT-TT-EEEEETS--TT-EE-TTTTT
T ss_pred HHhCCCCCCEEEECC--CeeEeChhh---ccccccccccccccc-ccccceeeeecccccccccccc--ccccccccccc
Confidence 344444444444442 233444333 445545555555442 2211222444444555555543 1222332222
Q ss_pred -CCCccEEEEecCCCCCcCccccccCCCCCccEEEeec
Q 002284 562 -PSQLRVISIWDSGALKFLPEAWMLDNNSSLEILDIRH 598 (943)
Q Consensus 562 -~~~L~~L~l~~~~~l~~~~~~~~~~~l~~L~~L~l~~ 598 (943)
.++++.+.+..+ +..++... +.+. .|+.+.+..
T Consensus 79 ~~~~l~~i~~~~~--~~~i~~~~-f~~~-~l~~i~~~~ 112 (129)
T PF13306_consen 79 NCTNLKNIDIPSN--ITEIGSSS-FSNC-NLKEINIPS 112 (129)
T ss_dssp T-TTECEEEETTT---BEEHTTT-TTT--T--EEE-TT
T ss_pred ccccccccccCcc--ccEEchhh-hcCC-CceEEEECC
Confidence 345555555332 22333322 2344 566555543
No 75
>PF13504 LRR_7: Leucine rich repeat; PDB: 3OJA_B 3G06_A 1OOK_G 1QYY_G 1SQ0_B 1P9A_G 1GWB_A 1P8V_A 1M0Z_A 1U0N_D ....
Probab=93.89 E-value=0.04 Score=29.19 Aligned_cols=17 Identities=24% Similarity=0.507 Sum_probs=11.5
Q ss_pred CcccEEEecCccccccC
Q 002284 89 QRLRVFSLRGYLISEVP 105 (943)
Q Consensus 89 ~~L~~L~L~~n~i~~lp 105 (943)
++||+|++++|+++.+|
T Consensus 1 ~~L~~L~l~~n~L~~lP 17 (17)
T PF13504_consen 1 PNLRTLDLSNNRLTSLP 17 (17)
T ss_dssp TT-SEEEETSS--SSE-
T ss_pred CccCEEECCCCCCCCCc
Confidence 47999999999998876
No 76
>KOG3864 consensus Uncharacterized conserved protein [Function unknown]
Probab=93.78 E-value=0.0055 Score=57.25 Aligned_cols=92 Identities=16% Similarity=0.200 Sum_probs=60.2
Q ss_pred ccCcCCccccccceeeeccccCCccCCCcCCCCCCCCceeecCCCCCccccCCCC--CCCCcceEEecCCcchhcccccc
Q 002284 741 SFPEGGLLSAKLKRLVIYGCKKLEALPEGMHNLSSLQYLTIGGVPSLLCFTEDGL--FPTNLHSLEIDGMKIWKSLMQLG 818 (943)
Q Consensus 741 ~~p~~~~~l~~L~~L~l~~~~~l~~~p~~~~~l~~L~~L~l~~~~~l~~~~~~~~--~~~~L~~L~l~~c~~l~~~~~~~ 818 (943)
+.|.....=..++.++-+++.....--+.+.++++++.|.+.+|..+.+..-+.. -.++|+.|+|++|+.+++... .
T Consensus 92 ~lp~~~~~~~~IeaVDAsds~I~~eGle~L~~l~~i~~l~l~~ck~~dD~~L~~l~~~~~~L~~L~lsgC~rIT~~GL-~ 170 (221)
T KOG3864|consen 92 SLPGPNADNVKIEAVDASDSSIMYEGLEHLRDLRSIKSLSLANCKYFDDWCLERLGGLAPSLQDLDLSGCPRITDGGL-A 170 (221)
T ss_pred cCCCCCCCcceEEEEecCCchHHHHHHHHHhccchhhhheeccccchhhHHHHHhcccccchheeeccCCCeechhHH-H
Confidence 3443323333677888887776555445667778888888888887765533221 247888888888888876653 2
Q ss_pred CCCCCCCccEEEecC
Q 002284 819 GFHRYTSLRRLAISG 833 (943)
Q Consensus 819 ~~~~l~~L~~L~l~~ 833 (943)
.+..+++|+.|.+.+
T Consensus 171 ~L~~lknLr~L~l~~ 185 (221)
T KOG3864|consen 171 CLLKLKNLRRLHLYD 185 (221)
T ss_pred HHHHhhhhHHHHhcC
Confidence 456677777777766
No 77
>KOG0473 consensus Leucine-rich repeat protein [Function unknown]
Probab=93.75 E-value=0.0056 Score=58.15 Aligned_cols=87 Identities=18% Similarity=0.158 Sum_probs=76.6
Q ss_pred ccccC-ccccCCCCCceeecCCCcccccchhhhhccccceeecCCCcccccccHHHhccccCceEEcCCCCCCccccccc
Q 002284 101 ISEVP-DSIGDLSYLRYLNLSGTQIRTLPESVNKLYNLHTLLLEGCRELKKKCADMGNLIKLHHLNNSNTDSLEEMPLGI 179 (943)
Q Consensus 101 i~~lp-~~~~~l~~L~~L~Ls~n~i~~lp~~i~~L~~L~~L~L~~n~~~~~~p~~~~~L~~L~~L~l~~n~~~~~~p~~~ 179 (943)
+..+| ..+...+.-+.||++.|++..+-..|+.++.|..||++.|. +..+|..++.+..++++++..|. ....|..+
T Consensus 30 ~s~~~v~ei~~~kr~tvld~~s~r~vn~~~n~s~~t~~~rl~~sknq-~~~~~~d~~q~~e~~~~~~~~n~-~~~~p~s~ 107 (326)
T KOG0473|consen 30 LSEIPVREIASFKRVTVLDLSSNRLVNLGKNFSILTRLVRLDLSKNQ-IKFLPKDAKQQRETVNAASHKNN-HSQQPKSQ 107 (326)
T ss_pred hcccchhhhhccceeeeehhhhhHHHhhccchHHHHHHHHHhccHhh-HhhChhhHHHHHHHHHHHhhccc-hhhCCccc
Confidence 34454 45777889999999999999988889999999999999985 88999999999999999999888 88999999
Q ss_pred cccccccccC
Q 002284 180 GKLTCLLTLC 189 (943)
Q Consensus 180 ~~L~~L~~L~ 189 (943)
++++.++.++
T Consensus 108 ~k~~~~k~~e 117 (326)
T KOG0473|consen 108 KKEPHPKKNE 117 (326)
T ss_pred cccCCcchhh
Confidence 9999988874
No 78
>KOG3864 consensus Uncharacterized conserved protein [Function unknown]
Probab=93.40 E-value=0.02 Score=53.65 Aligned_cols=85 Identities=16% Similarity=0.257 Sum_probs=51.1
Q ss_pred CCcceEEecCCcchhccccccCCCCCCCccEEEecCCCCcCcccCcccccccCCCCCCccEEEeecCCCCcccccc--cC
Q 002284 798 TNLHSLEIDGMKIWKSLMQLGGFHRYTSLRRLAISGCDEDMVSFPLEDIRLGTTLPACLTQLEIFNFPNLERLSSS--IC 875 (943)
Q Consensus 798 ~~L~~L~l~~c~~l~~~~~~~~~~~l~~L~~L~l~~c~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~l~~l~~~--~~ 875 (943)
..++.+|-+++..+..... .+..+++++.|.+.+| ..+.+.....-+...++|+.|++++||.+++-... ..
T Consensus 101 ~~IeaVDAsds~I~~eGle--~L~~l~~i~~l~l~~c----k~~dD~~L~~l~~~~~~L~~L~lsgC~rIT~~GL~~L~~ 174 (221)
T KOG3864|consen 101 VKIEAVDASDSSIMYEGLE--HLRDLRSIKSLSLANC----KYFDDWCLERLGGLAPSLQDLDLSGCPRITDGGLACLLK 174 (221)
T ss_pred ceEEEEecCCchHHHHHHH--HHhccchhhhheeccc----cchhhHHHHHhcccccchheeeccCCCeechhHHHHHHH
Confidence 4566677777776666554 5777778888888886 34444443333335666777777777766654321 13
Q ss_pred CCCCCeEeecCCC
Q 002284 876 DQNLTSLKLTNCP 888 (943)
Q Consensus 876 ~~~L~~L~l~~C~ 888 (943)
+++|+.|.+.+.+
T Consensus 175 lknLr~L~l~~l~ 187 (221)
T KOG3864|consen 175 LKNLRRLHLYDLP 187 (221)
T ss_pred hhhhHHHHhcCch
Confidence 5555555555543
No 79
>smart00369 LRR_TYP Leucine-rich repeats, typical (most populated) subfamily.
Probab=92.36 E-value=0.1 Score=31.34 Aligned_cols=20 Identities=45% Similarity=0.677 Sum_probs=14.4
Q ss_pred CCCCceeecCCCcccccchh
Q 002284 111 LSYLRYLNLSGTQIRTLPES 130 (943)
Q Consensus 111 l~~L~~L~Ls~n~i~~lp~~ 130 (943)
|++|++|+|++|+|+.+|..
T Consensus 1 L~~L~~L~L~~N~l~~lp~~ 20 (26)
T smart00369 1 LPNLRELDLSNNQLSSLPPG 20 (26)
T ss_pred CCCCCEEECCCCcCCcCCHH
Confidence 45677788888877777653
No 80
>smart00370 LRR Leucine-rich repeats, outliers.
Probab=92.36 E-value=0.1 Score=31.34 Aligned_cols=20 Identities=45% Similarity=0.677 Sum_probs=14.4
Q ss_pred CCCCceeecCCCcccccchh
Q 002284 111 LSYLRYLNLSGTQIRTLPES 130 (943)
Q Consensus 111 l~~L~~L~Ls~n~i~~lp~~ 130 (943)
|++|++|+|++|+|+.+|..
T Consensus 1 L~~L~~L~L~~N~l~~lp~~ 20 (26)
T smart00370 1 LPNLRELDLSNNQLSSLPPG 20 (26)
T ss_pred CCCCCEEECCCCcCCcCCHH
Confidence 45677788888877777653
No 81
>smart00370 LRR Leucine-rich repeats, outliers.
Probab=87.04 E-value=0.38 Score=28.83 Aligned_cols=21 Identities=29% Similarity=0.447 Sum_probs=18.1
Q ss_pred cCcccEEEecCccccccCccc
Q 002284 88 LQRLRVFSLRGYLISEVPDSI 108 (943)
Q Consensus 88 l~~L~~L~L~~n~i~~lp~~~ 108 (943)
+++|++|+|++|.+..+|...
T Consensus 1 L~~L~~L~L~~N~l~~lp~~~ 21 (26)
T smart00370 1 LPNLRELDLSNNQLSSLPPGA 21 (26)
T ss_pred CCCCCEEECCCCcCCcCCHHH
Confidence 578999999999999998643
No 82
>smart00369 LRR_TYP Leucine-rich repeats, typical (most populated) subfamily.
Probab=87.04 E-value=0.38 Score=28.83 Aligned_cols=21 Identities=29% Similarity=0.447 Sum_probs=18.1
Q ss_pred cCcccEEEecCccccccCccc
Q 002284 88 LQRLRVFSLRGYLISEVPDSI 108 (943)
Q Consensus 88 l~~L~~L~L~~n~i~~lp~~~ 108 (943)
+++|++|+|++|.+..+|...
T Consensus 1 L~~L~~L~L~~N~l~~lp~~~ 21 (26)
T smart00369 1 LPNLRELDLSNNQLSSLPPGA 21 (26)
T ss_pred CCCCCEEECCCCcCCcCCHHH
Confidence 578999999999999998643
No 83
>smart00365 LRR_SD22 Leucine-rich repeat, SDS22-like subfamily.
Probab=80.08 E-value=1.3 Score=26.60 Aligned_cols=17 Identities=35% Similarity=0.565 Sum_probs=11.7
Q ss_pred CCCCceeecCCCccccc
Q 002284 111 LSYLRYLNLSGTQIRTL 127 (943)
Q Consensus 111 l~~L~~L~Ls~n~i~~l 127 (943)
+++|++|+|++|+|+.+
T Consensus 1 L~~L~~L~L~~NkI~~I 17 (26)
T smart00365 1 LTNLEELDLSQNKIKKI 17 (26)
T ss_pred CCccCEEECCCCcccee
Confidence 35677777777777655
No 84
>smart00364 LRR_BAC Leucine-rich repeats, bacterial type.
Probab=78.60 E-value=1.2 Score=26.51 Aligned_cols=17 Identities=47% Similarity=0.722 Sum_probs=13.1
Q ss_pred CCceeecCCCcccccch
Q 002284 113 YLRYLNLSGTQIRTLPE 129 (943)
Q Consensus 113 ~L~~L~Ls~n~i~~lp~ 129 (943)
+|++|++++|+++.+|+
T Consensus 3 ~L~~L~vs~N~Lt~LPe 19 (26)
T smart00364 3 SLKELNVSNNQLTSLPE 19 (26)
T ss_pred ccceeecCCCccccCcc
Confidence 57778888888887775
No 85
>smart00367 LRR_CC Leucine-rich repeat - CC (cysteine-containing) subfamily.
Probab=78.11 E-value=1.5 Score=26.29 Aligned_cols=16 Identities=31% Similarity=0.636 Sum_probs=8.0
Q ss_pred CCCCeEeecCCCCCcc
Q 002284 877 QNLTSLKLTNCPKLKY 892 (943)
Q Consensus 877 ~~L~~L~l~~C~~L~~ 892 (943)
++|+.|+|++|++++.
T Consensus 2 ~~L~~L~l~~C~~itD 17 (26)
T smart00367 2 PNLRELDLSGCTNITD 17 (26)
T ss_pred CCCCEeCCCCCCCcCH
Confidence 4455555555554443
No 86
>PF13516 LRR_6: Leucine Rich repeat; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1DFJ_I 2BNH_A 3VQ1_A 3VQ2_A 2Z64_A 2OMX_A ....
Probab=74.10 E-value=1.8 Score=25.26 Aligned_cols=12 Identities=50% Similarity=0.587 Sum_probs=4.4
Q ss_pred CCceeecCCCcc
Q 002284 113 YLRYLNLSGTQI 124 (943)
Q Consensus 113 ~L~~L~Ls~n~i 124 (943)
+|++|+|++|.|
T Consensus 3 ~L~~L~l~~n~i 14 (24)
T PF13516_consen 3 NLETLDLSNNQI 14 (24)
T ss_dssp T-SEEE-TSSBE
T ss_pred CCCEEEccCCcC
Confidence 344444444443
No 87
>smart00368 LRR_RI Leucine rich repeat, ribonuclease inhibitor type.
Probab=57.79 E-value=7.2 Score=23.84 Aligned_cols=14 Identities=36% Similarity=0.503 Sum_probs=8.3
Q ss_pred CCCceeecCCCccc
Q 002284 112 SYLRYLNLSGTQIR 125 (943)
Q Consensus 112 ~~L~~L~Ls~n~i~ 125 (943)
++|++|||++|.|.
T Consensus 2 ~~L~~LdL~~N~i~ 15 (28)
T smart00368 2 PSLRELDLSNNKLG 15 (28)
T ss_pred CccCEEECCCCCCC
Confidence 35666666666554
No 88
>KOG3763 consensus mRNA export factor TAP/MEX67 [RNA processing and modification]
Probab=38.89 E-value=11 Score=41.84 Aligned_cols=66 Identities=17% Similarity=0.120 Sum_probs=38.1
Q ss_pred cCCeeEEEEeCCCCCCCC--C-CCCCCCCCCeeEEecCcCceeeCccccCCCCCCCCCCcceeeccccccccc
Q 002284 296 FSNLVTLKFQDCSMCTSM--P-SVGQLPSLKHLEVRGMSRVKRLGSEFYGNDSPIPFPCLETLHFAEMQEWEE 365 (943)
Q Consensus 296 l~~L~~L~L~~n~~~~~~--~-~~~~l~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~l~~ 365 (943)
++.+..+.|++|++...- . .....|+|+.|+|++|...-....+.. ......|++|.+.+|+.-+.
T Consensus 217 ~p~i~sl~lsnNrL~~Ld~~sslsq~apklk~L~LS~N~~~~~~~~el~----K~k~l~Leel~l~GNPlc~t 285 (585)
T KOG3763|consen 217 FPEILSLSLSNNRLYHLDALSSLSQIAPKLKTLDLSHNHSKISSESELD----KLKGLPLEELVLEGNPLCTT 285 (585)
T ss_pred CcceeeeecccchhhchhhhhHHHHhcchhheeecccchhhhcchhhhh----hhcCCCHHHeeecCCccccc
Confidence 566777888888774321 1 234467888888888832221111111 12256678888888774433
No 89
>KOG4308 consensus LRR-containing protein [Function unknown]
Probab=38.05 E-value=1.2 Score=49.93 Aligned_cols=160 Identities=18% Similarity=0.076 Sum_probs=0.0
Q ss_pred cCcccEEEecCccccc-----cCccccCC-CCCceeecCCCccc-----ccchhhhhccccceeecCCCcc----ccccc
Q 002284 88 LQRLRVFSLRGYLISE-----VPDSIGDL-SYLRYLNLSGTQIR-----TLPESVNKLYNLHTLLLEGCRE----LKKKC 152 (943)
Q Consensus 88 l~~L~~L~L~~n~i~~-----lp~~~~~l-~~L~~L~Ls~n~i~-----~lp~~i~~L~~L~~L~L~~n~~----~~~~p 152 (943)
...|..|++++|.++. +-..+... ..|++|++..|.++ .+.+.+.....++.+|++.|.+ ...++
T Consensus 114 ~~~L~~L~l~~n~l~~~g~~~l~~~l~~~~~~l~~L~l~~c~l~~~g~~~l~~~L~~~~~l~~l~l~~n~l~~~g~~~l~ 193 (478)
T KOG4308|consen 114 LPTLGQLDLSGNNLGDEGARLLCEGLRLPQCLLQTLELVSCSLTSEGAAPLAAVLEKNEHLTELDLSLNGLIELGLLVLS 193 (478)
T ss_pred cccHhHhhcccCCCccHhHHHHHhhcccchHHHHHHHhhcccccccchHHHHHHHhcccchhHHHHHhcccchhhhHHHh
Q ss_pred HHHhc----cccCceEEcCCCCCCcccc-----cccccccc-ccccCceEeccCCCCCcccccCcccc----cCceeecc
Q 002284 153 ADMGN----LIKLHHLNNSNTDSLEEMP-----LGIGKLTC-LLTLCNFVVGKDSGSGLRELKLLTHL----CGTLNISK 218 (943)
Q Consensus 153 ~~~~~----L~~L~~L~l~~n~~~~~~p-----~~~~~L~~-L~~L~~~~~~~~~~~~~~~l~~l~~L----~~~l~~~~ 218 (943)
..+.. ..++++|.+.+|. ++... ..+...+. +..|+...+...+...-...+.+... + .+....
T Consensus 194 ~~l~~~~~~~~~le~L~L~~~~-~t~~~c~~l~~~l~~~~~~~~el~l~~n~l~d~g~~~L~~~l~~~~~~l~-~l~l~~ 271 (478)
T KOG4308|consen 194 QALESAASPLSSLETLKLSRCG-VTSSSCALLDEVLASGESLLRELDLASNKLGDVGVEKLLPCLSVLSETLR-VLDLSR 271 (478)
T ss_pred hhhhhhhcccccHHHHhhhhcC-cChHHHHHHHHHHhccchhhHHHHHHhcCcchHHHHHHHHHhcccchhhh-hhhhhc
Q ss_pred cccccCccchhhcccCCCCCCCeEEEEeecC
Q 002284 219 LENVKYVGDAMEAQLDGKKNLKVLMLEWTRS 249 (943)
Q Consensus 219 l~~~~~~~~~~~~~l~~~~~L~~L~l~~n~~ 249 (943)
+.............+..+++++.+.++.|.+
T Consensus 272 nsi~~~~~~~L~~~l~~~~~l~~l~l~~n~l 302 (478)
T KOG4308|consen 272 NSITEKGVRDLAEVLVSCRQLEELSLSNNPL 302 (478)
T ss_pred CCccccchHHHHHHHhhhHHHHHhhcccCcc
No 90
>PF05725 FNIP: FNIP Repeat; InterPro: IPR008615 This repeat is approximately 22 residues long and is only found in Dictyostelium discoideum (Slime mould). It appears to be related to IPR001611 from INTERPRO. The alignment consists of two tandem repeats. It is termed the FNIP repeat after the pattern of conserved residues.
Probab=33.69 E-value=66 Score=22.20 Aligned_cols=31 Identities=32% Similarity=0.227 Sum_probs=15.7
Q ss_pred CccEEEeecCCCcccccCcCCCCCCceEEecc
Q 002284 590 SLEILDIRHCHLLTYIAGVQLPPSLKQLEIYN 621 (943)
Q Consensus 590 ~L~~L~l~~n~~~~~~~~~~~~~~L~~L~l~~ 621 (943)
++++|.++++ +-..+....+|+++++|.+.+
T Consensus 13 ~l~~L~~g~~-fn~~i~~~~lP~sl~~L~fg~ 43 (44)
T PF05725_consen 13 SLKSLIFGSS-FNQPIEPGSLPNSLKSLSFGY 43 (44)
T ss_pred CCeEEEECCc-cCccCCCCccCCCceEEEeeC
Confidence 4555665322 333344445666666666543
No 91
>KOG3763 consensus mRNA export factor TAP/MEX67 [RNA processing and modification]
Probab=28.52 E-value=29 Score=38.60 Aligned_cols=43 Identities=16% Similarity=0.158 Sum_probs=19.0
Q ss_pred ccceeceEEEecCCCcCccchhcc--CCCCcCeeeccCCCCCccc
Q 002284 514 LSFRLEHLELINCQDLEKLPKSLL--SLSSLTEMRIHNCSSLVSF 556 (943)
Q Consensus 514 ~l~~L~~L~l~~~~~~~~~~~~~~--~l~~L~~L~L~~n~~l~~~ 556 (943)
..|+|..|+|++|........++. +...|++|.+.||+..+.+
T Consensus 242 ~apklk~L~LS~N~~~~~~~~el~K~k~l~Leel~l~GNPlc~tf 286 (585)
T KOG3763|consen 242 IAPKLKTLDLSHNHSKISSESELDKLKGLPLEELVLEGNPLCTTF 286 (585)
T ss_pred hcchhheeecccchhhhcchhhhhhhcCCCHHHeeecCCccccch
Confidence 345666666666522111111111 2234555666666544433
Done!