Query 002285
Match_columns 942
No_of_seqs 615 out of 3783
Neff 6.9
Searched_HMMs 46136
Date Thu Mar 28 20:39:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002285.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/002285hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03064 alpha,alpha-trehalose 100.0 2E-184 3E-189 1664.2 94.7 911 25-941 1-932 (934)
2 PLN02205 alpha,alpha-trehalose 100.0 6E-156 1E-160 1424.3 80.1 746 103-940 58-849 (854)
3 PLN03063 alpha,alpha-trehalose 100.0 4E-155 8E-160 1419.0 86.9 782 100-940 5-788 (797)
4 PRK14501 putative bifunctional 100.0 5E-140 1E-144 1288.2 80.5 721 105-937 1-725 (726)
5 KOG1050 Trehalose-6-phosphate 100.0 2E-118 3E-123 1063.0 63.0 722 104-933 2-731 (732)
6 PRK10117 trehalose-6-phosphate 100.0 3E-111 6E-116 962.7 46.8 451 105-576 2-457 (474)
7 TIGR02398 gluc_glyc_Psyn gluco 100.0 7E-110 1E-114 961.4 48.8 454 110-572 1-482 (487)
8 PF00982 Glyco_transf_20: Glyc 100.0 6E-110 1E-114 964.3 35.0 464 105-572 1-474 (474)
9 COG0380 OtsA Trehalose-6-phosp 100.0 2E-105 4E-110 909.5 46.8 461 103-573 13-480 (486)
10 TIGR02400 trehalose_OtsA alpha 100.0 6E-102 1E-106 900.4 50.4 452 106-571 1-455 (456)
11 cd03788 GT1_TPS Trehalose-6-Ph 100.0 4.6E-93 1E-97 831.0 49.2 456 106-570 1-459 (460)
12 COG1877 OtsB Trehalose-6-phosp 100.0 2E-40 4.2E-45 354.6 25.8 251 588-938 4-254 (266)
13 PLN02151 trehalose-phosphatase 100.0 2.1E-40 4.6E-45 366.5 25.1 242 597-938 93-347 (354)
14 PLN03017 trehalose-phosphatase 100.0 1.5E-39 3.2E-44 360.7 27.4 246 594-939 103-362 (366)
15 PLN02580 trehalose-phosphatase 100.0 1.9E-39 4E-44 363.1 27.1 246 594-939 111-380 (384)
16 PF02358 Trehalose_PPase: Treh 100.0 1.8E-40 3.9E-45 355.4 13.2 204 606-824 1-206 (235)
17 TIGR02468 sucrsPsyn_pln sucros 100.0 5.1E-35 1.1E-39 357.7 49.3 527 242-819 310-992 (1050)
18 TIGR00685 T6PP trehalose-phosp 100.0 1.2E-36 2.5E-41 327.7 27.5 238 600-936 1-243 (244)
19 PRK10187 trehalose-6-phosphate 100.0 2.9E-36 6.2E-41 328.2 26.2 235 602-940 14-248 (266)
20 PLN02939 transferase, transfer 99.9 7.5E-25 1.6E-29 265.1 35.6 322 221-574 589-968 (977)
21 PLN02316 synthase/transferase 99.9 3.2E-24 6.9E-29 264.2 36.3 310 221-573 688-1034(1036)
22 PRK00654 glgA glycogen synthas 99.9 1.8E-24 3.8E-29 254.5 32.5 310 228-573 104-463 (466)
23 cd03792 GT1_Trehalose_phosphor 99.9 6.9E-25 1.5E-29 250.0 27.8 300 221-572 65-371 (372)
24 TIGR02095 glgA glycogen/starch 99.9 3.3E-24 7.1E-29 252.7 32.2 313 223-571 109-471 (473)
25 TIGR02472 sucr_P_syn_N sucrose 99.9 3.2E-24 6.8E-29 250.5 31.6 313 222-570 94-438 (439)
26 PRK14098 glycogen synthase; Pr 99.9 4.3E-24 9.2E-29 251.9 32.4 323 218-573 117-486 (489)
27 PRK15484 lipopolysaccharide 1, 99.9 9.1E-24 2E-28 242.1 33.1 273 241-573 98-378 (380)
28 PRK15427 colanic acid biosynth 99.9 7.7E-24 1.7E-28 244.7 32.1 276 242-571 118-404 (406)
29 PRK14099 glycogen synthase; Pr 99.9 4.6E-23 1E-27 242.9 34.5 316 220-574 109-480 (485)
30 TIGR03449 mycothiol_MshA UDP-N 99.9 9.6E-23 2.1E-27 234.6 34.3 290 241-573 100-402 (405)
31 cd03791 GT1_Glycogen_synthase_ 99.9 1E-22 2.2E-27 239.8 32.2 313 222-570 109-474 (476)
32 TIGR02470 sucr_synth sucrose s 99.9 4.2E-22 9.2E-27 240.7 35.8 332 222-570 364-745 (784)
33 cd03818 GT1_ExpC_like This fam 99.9 7.6E-23 1.6E-27 235.4 27.3 281 242-567 87-395 (396)
34 cd03813 GT1_like_3 This family 99.9 2.2E-22 4.7E-27 237.4 30.8 283 235-568 166-472 (475)
35 PLN02871 UDP-sulfoquinovose:DA 99.9 3.1E-22 6.8E-27 235.4 30.7 273 242-569 144-430 (465)
36 TIGR02149 glgA_Coryne glycogen 99.9 6.8E-22 1.5E-26 225.6 32.2 287 241-572 82-386 (388)
37 PLN00142 sucrose synthase 99.9 8.8E-22 1.9E-26 238.0 33.9 331 222-570 387-768 (815)
38 TIGR03088 stp2 sugar transfera 99.9 2E-21 4.3E-26 221.2 33.7 209 336-572 159-372 (374)
39 cd03796 GT1_PIG-A_like This fa 99.9 8E-22 1.7E-26 227.2 29.8 278 242-574 88-369 (398)
40 cd03800 GT1_Sucrose_synthase T 99.9 3.9E-21 8.5E-26 219.0 32.6 295 234-567 93-397 (398)
41 PRK15490 Vi polysaccharide bio 99.9 2.2E-21 4.8E-26 225.3 29.6 290 242-572 280-575 (578)
42 TIGR01484 HAD-SF-IIB HAD-super 99.9 1.5E-22 3.2E-27 211.9 16.4 194 604-823 1-200 (204)
43 cd04951 GT1_WbdM_like This fam 99.9 9.7E-21 2.1E-25 212.3 31.1 276 242-570 79-358 (360)
44 cd05844 GT1_like_7 Glycosyltra 99.9 1E-20 2.2E-25 213.6 30.5 270 242-567 82-365 (367)
45 cd03819 GT1_WavL_like This fam 99.9 1.1E-20 2.3E-25 212.1 29.5 266 242-557 78-349 (355)
46 PRK15179 Vi polysaccharide bio 99.9 1E-20 2.2E-25 228.9 31.0 280 242-569 400-690 (694)
47 cd04962 GT1_like_5 This family 99.9 3.1E-20 6.7E-25 210.1 32.0 277 242-572 84-370 (371)
48 TIGR02918 accessory Sec system 99.9 2.7E-20 5.9E-25 219.7 32.1 275 240-572 209-499 (500)
49 PLN02949 transferase, transfer 99.9 4.1E-20 8.8E-25 216.3 32.2 210 337-574 243-458 (463)
50 cd03805 GT1_ALG2_like This fam 99.9 4.8E-20 1E-24 210.7 31.3 284 241-566 93-392 (392)
51 PRK10307 putative glycosyl tra 99.9 4.8E-20 1E-24 213.2 30.9 285 241-574 105-409 (412)
52 cd03812 GT1_CapH_like This fam 99.9 1.8E-20 3.9E-25 210.4 26.0 253 241-543 79-336 (358)
53 cd03806 GT1_ALG11_like This fa 99.9 2.7E-20 5.9E-25 216.1 27.7 275 242-562 107-416 (419)
54 cd04946 GT1_AmsK_like This fam 99.9 1.7E-19 3.6E-24 208.8 31.8 272 242-567 127-406 (407)
55 cd03809 GT1_mtfB_like This fam 99.9 9.9E-20 2.1E-24 203.4 26.6 276 241-567 84-364 (365)
56 cd03821 GT1_Bme6_like This fam 99.9 1.5E-19 3.2E-24 201.2 27.7 279 240-567 85-374 (375)
57 cd03799 GT1_amsK_like This is 99.9 2.7E-19 5.9E-24 200.1 30.0 267 241-564 78-353 (355)
58 cd04949 GT1_gtfA_like This fam 99.9 6.4E-20 1.4E-24 208.5 25.1 279 228-565 86-371 (372)
59 cd03822 GT1_ecORF704_like This 99.9 1.7E-19 3.6E-24 201.7 28.0 280 242-570 76-365 (366)
60 cd03807 GT1_WbnK_like This fam 99.8 5E-19 1.1E-23 196.2 29.7 278 242-569 80-363 (365)
61 cd03794 GT1_wbuB_like This fam 99.8 5.7E-19 1.2E-23 197.2 30.0 280 240-567 97-394 (394)
62 cd03817 GT1_UGDG_like This fam 99.8 3.8E-19 8.3E-24 198.1 28.5 264 242-558 84-362 (374)
63 cd03793 GT1_Glycogen_synthase_ 99.8 6.7E-19 1.5E-23 204.8 31.2 310 241-571 147-585 (590)
64 PRK10125 putative glycosyl tra 99.8 2.2E-19 4.8E-24 207.4 26.6 188 337-571 212-403 (405)
65 cd03801 GT1_YqgM_like This fam 99.8 8.4E-19 1.8E-23 193.3 29.7 282 242-570 85-373 (374)
66 cd03814 GT1_like_2 This family 99.8 5.1E-19 1.1E-23 197.3 27.5 272 242-570 83-363 (364)
67 cd03798 GT1_wlbH_like This fam 99.8 9.7E-19 2.1E-23 193.8 29.5 282 241-572 92-376 (377)
68 PRK09922 UDP-D-galactose:(gluc 99.8 4.2E-19 9.2E-24 201.7 26.8 264 242-572 84-355 (359)
69 cd03820 GT1_amsD_like This fam 99.8 6.5E-19 1.4E-23 193.6 26.3 263 241-567 82-347 (348)
70 PRK15126 thiamin pyrimidine py 99.8 1.6E-19 3.4E-24 197.7 20.8 193 602-823 2-225 (272)
71 PLN02846 digalactosyldiacylgly 99.8 4.6E-19 9.9E-24 205.3 24.8 265 242-572 116-391 (462)
72 COG0561 Cof Predicted hydrolas 99.8 1.6E-19 3.5E-24 196.7 19.9 195 601-824 2-227 (264)
73 PHA01633 putative glycosyl tra 99.8 2.2E-18 4.8E-23 192.6 28.5 196 341-567 117-334 (335)
74 cd03823 GT1_ExpE7_like This fa 99.8 2.9E-18 6.3E-23 190.6 29.0 258 242-569 96-356 (359)
75 PLN02501 digalactosyldiacylgly 99.8 5.1E-19 1.1E-23 207.4 23.1 263 242-569 434-706 (794)
76 PRK01158 phosphoglycolate phos 99.8 5.7E-19 1.2E-23 188.0 21.2 182 602-823 3-194 (230)
77 TIGR03087 stp1 sugar transfera 99.8 4.7E-18 1E-22 195.8 30.4 194 336-571 195-395 (397)
78 PRK03669 mannosyl-3-phosphogly 99.8 9.3E-19 2E-23 191.6 23.3 187 601-823 6-227 (271)
79 cd03816 GT1_ALG1_like This fam 99.8 1.7E-18 3.6E-23 201.0 25.9 268 241-556 94-401 (415)
80 cd03808 GT1_cap1E_like This fa 99.8 5.5E-18 1.2E-22 187.1 28.6 273 242-567 80-358 (359)
81 PHA01630 putative group 1 glyc 99.8 3.2E-18 6.9E-23 192.5 25.6 214 298-572 94-330 (331)
82 PRK10513 sugar phosphate phosp 99.8 1.5E-18 3.3E-23 189.5 22.4 191 602-823 3-233 (270)
83 cd03795 GT1_like_4 This family 99.8 1.6E-17 3.4E-22 186.1 29.3 265 241-559 82-353 (357)
84 cd03802 GT1_AviGT4_like This f 99.8 1.2E-17 2.5E-22 185.9 27.5 243 241-568 86-332 (335)
85 PRK10976 putative hydrolase; P 99.8 3E-18 6.4E-23 186.9 20.5 193 602-824 2-228 (266)
86 cd03804 GT1_wbaZ_like This fam 99.8 1.9E-17 4.1E-22 186.9 26.3 249 241-566 82-350 (351)
87 cd04955 GT1_like_6 This family 99.8 3.2E-17 6.9E-22 184.3 27.3 268 242-570 84-362 (363)
88 cd03811 GT1_WabH_like This fam 99.8 3.1E-17 6.6E-22 180.4 24.8 246 242-538 81-332 (353)
89 TIGR01482 SPP-subfamily Sucros 99.8 8.1E-18 1.7E-22 178.5 18.6 181 605-823 1-186 (225)
90 PF08282 Hydrolase_3: haloacid 99.8 2.1E-17 4.5E-22 176.5 21.4 185 605-824 1-224 (254)
91 PLN02887 hydrolase family prot 99.8 2.6E-17 5.6E-22 195.4 23.2 198 594-823 301-544 (580)
92 cd03825 GT1_wcfI_like This fam 99.8 1.3E-16 2.9E-21 179.1 27.9 197 336-572 158-364 (365)
93 PRK10530 pyridoxal phosphate ( 99.8 4.4E-17 9.6E-22 177.9 22.5 191 602-823 3-236 (272)
94 PLN02275 transferase, transfer 99.8 1E-16 2.3E-21 183.2 26.0 240 241-536 99-371 (371)
95 PTZ00174 phosphomannomutase; P 99.7 5.8E-17 1.3E-21 175.1 20.9 198 600-823 3-225 (247)
96 TIGR01485 SPP_plant-cyano sucr 99.7 2E-17 4.4E-22 178.8 16.4 191 602-821 1-202 (249)
97 TIGR02471 sucr_syn_bact_C sucr 99.7 3.7E-17 7.9E-22 175.3 16.4 184 604-823 1-196 (236)
98 TIGR00099 Cof-subfamily Cof su 99.7 5.6E-17 1.2E-21 175.9 17.9 191 604-823 1-225 (256)
99 PLN02423 phosphomannomutase 99.7 3.6E-16 7.9E-21 168.6 23.1 188 602-821 7-223 (245)
100 TIGR01487 SPP-like sucrose-pho 99.7 8.6E-17 1.9E-21 169.9 17.7 182 603-824 2-185 (215)
101 TIGR02463 MPGP_rel mannosyl-3- 99.7 1.1E-16 2.4E-21 169.6 18.2 184 604-823 1-216 (221)
102 COG0297 GlgA Glycogen synthase 99.7 1.5E-15 3.2E-20 176.4 28.4 285 222-538 108-442 (487)
103 TIGR01486 HAD-SF-IIB-MPGP mann 99.7 1.8E-16 3.8E-21 172.2 18.7 182 604-824 1-216 (256)
104 PRK05749 3-deoxy-D-manno-octul 99.7 1.5E-14 3.2E-19 168.3 29.8 279 242-571 124-418 (425)
105 PF00534 Glycos_transf_1: Glyc 99.7 4.4E-16 9.6E-21 157.5 14.8 156 372-552 13-171 (172)
106 PRK00192 mannosyl-3-phosphogly 99.7 1.6E-15 3.6E-20 166.2 19.3 185 602-824 4-229 (273)
107 PRK14502 bifunctional mannosyl 99.7 2.4E-15 5.1E-20 177.9 20.1 188 601-824 415-653 (694)
108 PLN02382 probable sucrose-phos 99.6 2.4E-15 5.2E-20 173.5 17.0 196 596-822 3-214 (413)
109 PRK12702 mannosyl-3-phosphogly 99.6 7.4E-15 1.6E-19 158.5 19.1 188 602-823 1-247 (302)
110 TIGR02461 osmo_MPG_phos mannos 99.6 4.8E-15 1E-19 157.9 13.2 187 604-823 1-220 (225)
111 KOG1111 N-acetylglucosaminyltr 99.5 1E-13 2.2E-18 150.0 17.2 165 335-537 167-334 (426)
112 PF05116 S6PP: Sucrose-6F-phos 99.5 1.2E-14 2.7E-19 156.9 9.3 184 602-821 2-200 (247)
113 cd04950 GT1_like_1 Glycosyltra 99.5 1E-12 2.2E-17 150.6 23.8 264 242-572 102-371 (373)
114 PLN02605 monogalactosyldiacylg 99.5 6.4E-12 1.4E-16 144.4 27.4 195 336-569 172-378 (382)
115 KOG0853 Glycosyltransferase [C 99.4 2.7E-11 5.8E-16 139.3 22.2 186 373-572 272-467 (495)
116 cd01635 Glycosyltransferase_GT 99.3 3.1E-11 6.7E-16 125.4 17.9 119 379-520 109-229 (229)
117 COG0438 RfaG Glycosyltransfera 99.3 6.2E-11 1.3E-15 128.8 20.4 199 338-573 173-377 (381)
118 cd03785 GT1_MurG MurG is an N- 99.3 2.3E-10 4.9E-15 129.1 23.6 241 242-560 89-345 (350)
119 PRK00726 murG undecaprenyldiph 99.3 2.5E-10 5.5E-15 129.6 24.0 252 242-571 91-356 (357)
120 PRK13609 diacylglycerol glucos 99.3 1.1E-09 2.4E-14 125.6 27.5 262 242-575 104-374 (380)
121 TIGR01133 murG undecaprenyldip 99.3 4.3E-10 9.4E-15 126.7 23.4 181 340-564 153-346 (348)
122 TIGR02094 more_P_ylases alpha- 99.2 7.8E-09 1.7E-13 124.5 32.9 180 373-569 388-597 (601)
123 KOG1387 Glycosyltransferase [C 99.2 2.7E-09 5.8E-14 115.3 24.6 308 222-573 126-459 (465)
124 cd03786 GT1_UDP-GlcNAc_2-Epime 99.2 1.8E-09 3.8E-14 122.6 23.6 242 242-540 88-339 (363)
125 TIGR00236 wecB UDP-N-acetylglu 99.2 3.4E-09 7.4E-14 121.0 24.4 242 242-539 86-335 (365)
126 TIGR03713 acc_sec_asp1 accesso 99.1 5.8E-09 1.3E-13 124.0 24.7 279 225-562 203-511 (519)
127 COG3769 Predicted hydrolase (H 99.1 3.6E-10 7.9E-15 115.1 12.0 192 601-824 6-231 (274)
128 PRK13608 diacylglycerol glucos 99.1 1.8E-08 3.9E-13 116.4 25.8 261 242-575 104-374 (391)
129 PRK09814 beta-1,6-galactofuran 99.0 4.6E-08 1E-12 110.5 23.3 248 236-564 58-323 (333)
130 PF13692 Glyco_trans_1_4: Glyc 99.0 1.8E-09 3.9E-14 104.8 9.3 129 374-537 2-134 (135)
131 cd04299 GT1_Glycogen_Phosphory 99.0 8.6E-08 1.9E-12 117.7 26.0 182 375-571 479-688 (778)
132 PRK00025 lpxB lipid-A-disaccha 99.0 8.9E-08 1.9E-12 109.6 24.8 144 373-550 185-352 (380)
133 PF05693 Glycogen_syn: Glycoge 99.0 2.7E-07 5.9E-12 108.1 27.6 107 463-573 462-582 (633)
134 cd01427 HAD_like Haloacid deha 98.5 4.3E-07 9.4E-12 86.8 7.9 62 604-672 1-62 (139)
135 PF03332 PMM: Eukaryotic phosp 98.4 1.1E-06 2.5E-11 91.4 10.1 172 638-821 1-198 (220)
136 PF13524 Glyco_trans_1_2: Glyc 98.4 1.7E-06 3.7E-11 78.7 9.8 87 473-567 1-91 (92)
137 TIGR00215 lpxB lipid-A-disacch 98.4 0.00012 2.6E-09 84.6 26.3 135 373-539 190-348 (385)
138 KOG3189 Phosphomannomutase [Li 98.3 1.2E-05 2.5E-10 81.5 14.4 184 596-809 5-214 (252)
139 COG1519 KdtA 3-deoxy-D-manno-o 98.2 0.00047 1E-08 78.3 26.6 174 358-557 214-404 (419)
140 TIGR02919 accessory Sec system 98.2 0.00026 5.6E-09 82.9 23.7 121 390-540 291-413 (438)
141 smart00775 LNS2 LNS2 domain. T 98.1 6.8E-06 1.5E-10 82.9 6.6 77 604-684 1-88 (157)
142 TIGR01670 YrbI-phosphatas 3-de 98.0 1.7E-05 3.7E-10 79.6 9.2 38 779-823 76-113 (154)
143 PRK09484 3-deoxy-D-manno-octul 97.9 1.7E-05 3.7E-10 82.0 7.2 37 780-823 97-133 (183)
144 TIGR01689 EcbF-BcbF capsule bi 97.8 3E-05 6.5E-10 75.1 6.4 54 603-665 2-55 (126)
145 PRK11133 serB phosphoserine ph 97.6 1.9E-05 4.2E-10 88.7 1.7 40 777-823 246-285 (322)
146 TIGR01684 viral_ppase viral ph 97.6 0.00013 2.7E-09 79.8 7.5 71 601-684 125-200 (301)
147 TIGR01457 HAD-SF-IIA-hyp2 HAD- 97.4 0.00057 1.2E-08 74.2 9.7 64 603-682 2-73 (249)
148 COG0560 SerB Phosphoserine pho 97.4 0.00088 1.9E-08 71.0 10.7 46 771-823 136-181 (212)
149 KOG2941 Beta-1,4-mannosyltrans 97.2 0.0092 2E-07 65.9 15.9 166 373-567 254-433 (444)
150 PHA03398 viral phosphatase sup 97.2 0.00084 1.8E-08 73.5 7.3 71 601-684 127-202 (303)
151 TIGR02726 phenyl_P_delta pheny 97.0 0.0017 3.7E-08 66.4 7.5 65 602-671 7-71 (169)
152 TIGR01662 HAD-SF-IIIA HAD-supe 96.8 0.0011 2.4E-08 64.4 4.2 64 603-673 1-72 (132)
153 COG0763 LpxB Lipid A disacchar 96.7 0.1 2.3E-06 59.1 18.7 264 222-557 71-365 (381)
154 TIGR01681 HAD-SF-IIIC HAD-supe 96.4 0.005 1.1E-07 59.9 5.6 65 603-670 1-66 (128)
155 TIGR01458 HAD-SF-IIA-hyp3 HAD- 96.4 0.0029 6.3E-08 69.1 4.0 52 603-666 2-53 (257)
156 PRK10444 UMP phosphatase; Prov 96.2 0.0039 8.4E-08 67.8 4.0 53 603-671 2-54 (248)
157 PRK13225 phosphoglycolate phos 96.2 0.026 5.7E-07 62.2 10.2 37 779-822 196-232 (273)
158 KOG1050 Trehalose-6-phosphate 96.1 0.00026 5.7E-09 86.7 -6.3 219 587-824 174-425 (732)
159 TIGR01672 AphA HAD superfamily 96.1 0.014 3.1E-07 62.8 7.2 81 589-671 50-155 (237)
160 PF08323 Glyco_transf_5: Starc 96.0 0.025 5.4E-07 61.4 9.0 96 220-315 111-232 (245)
161 PLN02645 phosphoglycolate phos 95.9 0.0063 1.4E-07 68.4 4.0 53 602-670 28-80 (311)
162 PRK13288 pyrophosphatase PpaX; 95.9 0.026 5.7E-07 59.4 8.2 38 779-823 139-176 (214)
163 PRK13223 phosphoglycolate phos 95.8 0.054 1.2E-06 59.7 10.8 41 776-823 155-195 (272)
164 TIGR01452 PGP_euk phosphoglyco 95.8 0.0077 1.7E-07 66.5 4.1 49 602-666 2-50 (279)
165 PF02684 LpxB: Lipid-A-disacch 95.7 1.9 4.2E-05 49.6 23.1 235 241-541 81-343 (373)
166 TIGR03568 NeuC_NnaA UDP-N-acet 95.7 1.8 3.9E-05 49.9 23.0 71 454-537 265-338 (365)
167 TIGR01664 DNA-3'-Pase DNA 3'-p 95.6 0.018 3.8E-07 58.8 5.6 56 601-661 12-69 (166)
168 PF02350 Epimerase_2: UDP-N-ac 95.6 2.6 5.6E-05 48.2 23.4 243 242-538 67-318 (346)
169 COG1778 Low specificity phosph 95.5 0.021 4.6E-07 56.6 5.4 70 600-674 6-75 (170)
170 TIGR00213 GmhB_yaeD D,D-heptos 95.5 0.012 2.6E-07 60.3 3.7 52 603-661 2-53 (176)
171 PRK14986 glycogen phosphorylas 95.5 1.3 2.8E-05 55.3 21.5 150 373-530 542-702 (815)
172 TIGR01656 Histidinol-ppas hist 95.3 0.025 5.4E-07 56.3 5.2 53 603-660 1-53 (147)
173 PF13439 Glyco_transf_4: Glyco 95.3 0.048 1E-06 54.1 7.2 92 242-352 80-177 (177)
174 TIGR01668 YqeG_hyp_ppase HAD s 95.2 0.052 1.1E-06 55.5 7.4 61 599-673 22-83 (170)
175 COG2179 Predicted hydrolase of 95.1 0.066 1.4E-06 53.8 7.4 68 596-677 22-89 (175)
176 PF07429 Glyco_transf_56: 4-al 95.0 1.9 4.1E-05 48.6 19.1 135 382-537 193-332 (360)
177 PRK11009 aphA acid phosphatase 94.7 0.07 1.5E-06 57.5 7.0 71 589-661 50-141 (237)
178 TIGR01261 hisB_Nterm histidino 94.6 0.039 8.5E-07 55.9 4.6 53 603-659 2-54 (161)
179 cd04300 GT1_Glycogen_Phosphory 94.4 3.5 7.7E-05 51.6 21.4 150 373-530 529-689 (797)
180 PF13344 Hydrolase_6: Haloacid 94.3 0.027 5.9E-07 52.5 2.3 54 605-674 1-57 (101)
181 PF08645 PNK3P: Polynucleotide 94.2 0.041 8.9E-07 55.7 3.5 53 603-658 1-53 (159)
182 PF13579 Glyco_trans_4_4: Glyc 94.1 0.13 2.8E-06 50.1 6.9 84 241-345 72-160 (160)
183 COG0546 Gph Predicted phosphat 94.0 0.32 6.9E-06 51.7 10.1 34 782-822 149-182 (220)
184 PHA02530 pseT polynucleotide k 93.9 0.1 2.2E-06 58.0 6.5 67 601-671 157-224 (300)
185 PRK05446 imidazole glycerol-ph 93.8 0.088 1.9E-06 60.0 5.7 55 601-659 1-55 (354)
186 PRK14985 maltodextrin phosphor 93.8 4.5 9.7E-05 50.6 20.4 150 373-530 528-688 (798)
187 PRK08942 D,D-heptose 1,7-bisph 93.7 0.083 1.8E-06 54.3 4.9 53 602-660 3-55 (181)
188 PF09419 PGP_phosphatase: Mito 93.5 0.21 4.6E-06 50.9 7.2 66 597-675 36-109 (168)
189 PRK06769 hypothetical protein; 93.2 0.09 2E-06 53.9 4.2 53 600-660 2-54 (173)
190 PF13844 Glyco_transf_41: Glyc 93.2 2.5 5.5E-05 50.0 16.3 172 373-573 284-467 (468)
191 TIGR01663 PNK-3'Pase polynucle 93.0 0.14 3.1E-06 61.3 6.0 55 600-661 166-224 (526)
192 PLN02954 phosphoserine phospha 93.0 0.13 2.8E-06 54.5 5.1 34 778-820 154-187 (224)
193 TIGR01459 HAD-SF-IIA-hyp4 HAD- 93.0 0.15 3.2E-06 55.1 5.6 55 602-672 8-64 (242)
194 PTZ00445 p36-lilke protein; Pr 92.8 0.22 4.8E-06 52.3 6.2 68 590-661 31-102 (219)
195 TIGR01525 ATPase-IB_hvy heavy 92.5 0.57 1.2E-05 57.0 10.3 65 597-673 359-424 (556)
196 TIGR01460 HAD-SF-IIA Haloacid 92.4 0.18 3.9E-06 54.3 5.3 50 605-670 1-53 (236)
197 TIGR03492 conserved hypothetic 92.2 6 0.00013 46.1 17.9 135 379-539 212-365 (396)
198 PF12710 HAD: haloacid dehalog 92.2 0.37 8E-06 49.3 7.1 37 636-673 92-128 (192)
199 TIGR01675 plant-AP plant acid 92.0 0.2 4.4E-06 53.6 4.9 69 601-670 76-159 (229)
200 PRK13582 thrH phosphoserine ph 92.0 0.25 5.3E-06 51.5 5.6 38 633-672 68-105 (205)
201 TIGR00338 serB phosphoserine p 91.8 0.32 6.9E-06 51.3 6.2 38 779-823 152-189 (219)
202 TIGR01533 lipo_e_P4 5'-nucleot 91.6 0.22 4.7E-06 54.7 4.8 73 600-673 73-160 (266)
203 smart00577 CPDc catalytic doma 91.5 0.33 7.2E-06 48.3 5.6 70 601-672 1-82 (148)
204 PRK02797 4-alpha-L-fucosyltran 91.5 22 0.00047 39.9 19.9 122 376-519 147-271 (322)
205 PRK09552 mtnX 2-hydroxy-3-keto 91.3 0.18 3.8E-06 53.6 3.6 39 632-671 73-111 (219)
206 TIGR01680 Veg_Stor_Prot vegeta 91.1 0.55 1.2E-05 51.4 7.2 64 601-665 100-176 (275)
207 TIGR01685 MDP-1 magnesium-depe 90.9 0.44 9.5E-06 49.0 5.9 71 602-673 2-85 (174)
208 cd03784 GT1_Gtf_like This fami 90.6 37 0.00081 39.0 23.1 72 455-537 292-371 (401)
209 PF06437 ISN1: IMP-specific 5' 90.4 13 0.00029 42.4 17.1 196 589-809 134-377 (408)
210 COG0381 WecB UDP-N-acetylgluco 90.3 24 0.00053 40.6 19.5 134 374-540 205-343 (383)
211 TIGR01488 HAD-SF-IB Haloacid D 90.3 0.18 3.9E-06 51.1 2.4 41 774-821 137-177 (177)
212 TIGR01512 ATPase-IB2_Cd heavy 90.0 1.2 2.7E-05 53.9 9.6 62 600-673 340-402 (536)
213 PF03767 Acid_phosphat_B: HAD 89.5 0.04 8.7E-07 59.2 -3.2 85 600-685 70-167 (229)
214 COG1778 Low specificity phosph 89.2 0.23 5E-06 49.5 2.2 39 779-824 83-121 (170)
215 PF08235 LNS2: LNS2 (Lipin/Ned 89.2 0.56 1.2E-05 47.3 4.9 57 604-665 1-58 (157)
216 COG0707 MurG UDP-N-acetylgluco 89.1 49 0.0011 38.1 24.6 87 461-556 243-341 (357)
217 PLN03243 haloacid dehalogenase 88.2 1 2.2E-05 49.4 6.5 17 600-616 22-38 (260)
218 PRK01021 lpxB lipid-A-disaccha 88.2 56 0.0012 40.1 21.5 49 241-294 309-359 (608)
219 TIGR01426 MGT glycosyltransfer 88.2 6.9 0.00015 45.1 13.9 99 455-566 279-386 (392)
220 PRK14089 ipid-A-disaccharide s 87.9 52 0.0011 37.7 20.3 44 241-289 75-120 (347)
221 PRK14988 GMP/IMP nucleotidase; 87.3 1 2.2E-05 48.1 5.8 15 602-616 10-24 (224)
222 TIGR03590 PseG pseudaminic aci 87.1 3.5 7.7E-05 45.5 10.1 89 374-493 171-259 (279)
223 TIGR01686 FkbH FkbH-like domai 86.7 1.4 3.1E-05 49.7 6.9 63 602-670 3-67 (320)
224 TIGR01489 DKMTPPase-SF 2,3-dik 86.5 1.3 2.8E-05 45.1 5.8 39 775-823 145-183 (188)
225 TIGR03333 salvage_mtnX 2-hydro 86.4 1.3 2.7E-05 46.9 5.9 39 632-671 69-107 (214)
226 COG0241 HisB Histidinol phosph 86.3 0.68 1.5E-05 47.8 3.6 51 602-659 5-56 (181)
227 PF00343 Phosphorylase: Carboh 86.1 26 0.00057 43.6 17.4 149 373-530 443-603 (713)
228 COG0637 Predicted phosphatase/ 84.8 0.72 1.6E-05 49.2 3.1 40 632-672 85-124 (221)
229 KOG3742 Glycogen synthase [Car 84.7 16 0.00035 42.3 13.5 72 463-538 493-578 (692)
230 PF12689 Acid_PPase: Acid Phos 84.3 1.6 3.4E-05 44.8 5.1 72 602-674 3-86 (169)
231 PF03031 NIF: NLI interacting 84.2 1 2.2E-05 45.1 3.8 67 603-671 1-72 (159)
232 TIGR02137 HSK-PSP phosphoserin 84.1 1.3 2.9E-05 46.6 4.7 39 633-673 68-106 (203)
233 COG0647 NagD Predicted sugar p 83.8 1.2 2.7E-05 48.8 4.4 53 602-670 8-63 (269)
234 TIGR02250 FCP1_euk FCP1-like p 83.1 1.8 3.9E-05 43.7 5.0 71 599-671 3-94 (156)
235 TIGR01456 CECR5 HAD-superfamil 83.1 2.1 4.5E-05 48.5 6.0 49 604-668 2-57 (321)
236 COG0058 GlgP Glucan phosphoryl 82.6 24 0.00052 44.0 15.0 137 373-522 486-630 (750)
237 PRK08238 hypothetical protein; 81.8 2.9 6.3E-05 49.9 6.8 47 633-680 72-120 (479)
238 TIGR01522 ATPase-IIA2_Ca golgi 81.7 14 0.0003 47.8 13.3 68 594-673 495-567 (884)
239 TIGR01491 HAD-SF-IB-PSPlk HAD- 81.2 1.3 2.8E-05 45.6 3.3 39 778-823 146-184 (201)
240 TIGR02245 HAD_IIID1 HAD-superf 80.0 3.1 6.8E-05 43.6 5.6 62 600-671 19-81 (195)
241 COG4641 Uncharacterized protei 79.9 3.5 7.6E-05 46.9 6.2 116 452-572 239-361 (373)
242 PRK10671 copA copper exporting 79.7 4.1 9E-05 52.2 7.7 67 594-672 622-688 (834)
243 PLN02954 phosphoserine phospha 79.4 4.2 9.1E-05 42.9 6.5 15 602-616 12-26 (224)
244 TIGR01490 HAD-SF-IB-hyp1 HAD-s 77.8 2.2 4.7E-05 44.3 3.6 42 775-823 151-192 (202)
245 PRK13222 phosphoglycolate phos 77.7 4.5 9.7E-05 42.5 6.1 37 780-823 151-187 (226)
246 TIGR02251 HIF-SF_euk Dullard-l 77.4 4.1 8.9E-05 41.3 5.4 68 602-671 1-78 (162)
247 PRK10725 fructose-1-P/6-phosph 77.3 2.1 4.6E-05 43.7 3.4 36 780-822 144-179 (188)
248 PF12000 Glyco_trans_4_3: Gkyc 76.3 11 0.00024 38.7 8.1 47 222-270 43-92 (171)
249 PF06888 Put_Phosphatase: Puta 73.6 7.5 0.00016 41.9 6.4 45 774-822 145-189 (234)
250 PRK11590 hypothetical protein; 73.0 1.9 4.2E-05 45.4 1.8 38 776-823 160-197 (211)
251 TIGR02093 P_ylase glycogen/sta 72.8 50 0.0011 41.7 13.9 150 373-530 526-686 (794)
252 PRK13226 phosphoglycolate phos 72.6 7.8 0.00017 41.3 6.4 37 780-823 153-189 (229)
253 TIGR02252 DREG-2 REG-2-like, H 71.6 2.5 5.3E-05 43.9 2.1 35 781-822 163-198 (203)
254 TIGR01548 HAD-SF-IA-hyp1 haloa 70.9 1.9 4.1E-05 44.7 1.1 31 780-817 163-193 (197)
255 PHA02597 30.2 hypothetical pro 70.0 2.2 4.7E-05 44.2 1.3 32 780-820 132-163 (197)
256 TIGR01422 phosphonatase phosph 69.7 3.4 7.3E-05 44.7 2.8 36 781-822 159-194 (253)
257 TIGR02009 PGMB-YQAB-SF beta-ph 68.8 2.5 5.4E-05 42.9 1.5 35 781-822 145-179 (185)
258 TIGR01454 AHBA_synth_RP 3-amin 66.9 11 0.00024 39.2 5.9 37 780-823 133-169 (205)
259 PRK11587 putative phosphatase; 66.8 3.2 6.8E-05 43.9 1.8 35 781-822 141-175 (218)
260 TIGR03351 PhnX-like phosphonat 66.5 4.7 0.0001 42.4 3.0 37 780-823 147-184 (220)
261 PLN02779 haloacid dehalogenase 66.4 3.1 6.7E-05 46.2 1.7 36 781-823 205-240 (286)
262 TIGR02253 CTE7 HAD superfamily 66.3 6.4 0.00014 41.3 4.0 37 780-823 152-189 (221)
263 PRK13582 thrH phosphoserine ph 65.5 9.6 0.00021 39.5 5.1 21 801-822 144-164 (205)
264 PF05152 DUF705: Protein of un 64.9 17 0.00037 40.1 6.8 60 601-672 121-180 (297)
265 TIGR01990 bPGM beta-phosphoglu 64.8 4.6 9.9E-05 41.0 2.5 36 780-822 143-178 (185)
266 PF06888 Put_Phosphatase: Puta 64.6 7.3 0.00016 42.0 4.0 38 634-671 72-110 (234)
267 TIGR01449 PGP_bact 2-phosphogl 64.5 9.4 0.0002 39.7 4.8 37 780-823 143-179 (213)
268 PLN02770 haloacid dehalogenase 64.4 3.7 8.1E-05 44.4 1.8 36 780-822 166-201 (248)
269 PRK10563 6-phosphogluconate ph 63.9 5.5 0.00012 42.0 2.9 36 780-822 144-179 (221)
270 COG4087 Soluble P-type ATPase 63.8 15 0.00032 35.9 5.4 22 800-822 92-113 (152)
271 PRK13226 phosphoglycolate phos 63.5 5.3 0.00012 42.6 2.8 17 917-933 209-225 (229)
272 PRK10748 flavin mononucleotide 63.2 4.2 9E-05 43.7 1.9 36 780-822 165-201 (238)
273 PF00702 Hydrolase: haloacid d 62.6 6.7 0.00015 40.5 3.3 33 783-822 183-215 (215)
274 TIGR00338 serB phosphoserine p 62.3 5.7 0.00012 41.7 2.7 37 634-671 86-122 (219)
275 TIGR01993 Pyr-5-nucltdase pyri 61.2 4.8 0.0001 41.1 1.9 35 780-821 143-177 (184)
276 COG4087 Soluble P-type ATPase 60.8 7.9 0.00017 37.8 3.0 52 605-673 17-68 (152)
277 COG3914 Spy Predicted O-linked 60.7 2.8E+02 0.0061 33.8 16.1 102 384-507 438-539 (620)
278 COG4030 Uncharacterized protei 60.6 8.7 0.00019 40.7 3.5 51 632-684 82-132 (315)
279 KOG3120 Predicted haloacid deh 59.5 21 0.00045 38.0 6.0 46 772-821 156-201 (256)
280 TIGR02254 YjjG/YfnB HAD superf 58.9 4.7 0.0001 42.3 1.3 37 780-823 154-192 (224)
281 TIGR01652 ATPase-Plipid phosph 57.7 56 0.0012 43.2 11.1 36 634-670 632-667 (1057)
282 PRK09449 dUMP phosphatase; Pro 56.5 5.7 0.00012 41.9 1.5 36 781-822 153-189 (224)
283 TIGR01493 HAD-SF-IA-v2 Haloaci 55.7 5.3 0.00012 40.3 1.0 30 781-817 142-171 (175)
284 TIGR01428 HAD_type_II 2-haloal 54.7 6.6 0.00014 40.6 1.6 36 781-823 151-186 (198)
285 COG4359 Uncharacterized conser 53.9 20 0.00043 37.0 4.7 39 774-823 142-180 (220)
286 COG1819 Glycosyl transferases, 52.4 3E+02 0.0064 32.3 14.9 97 456-568 289-396 (406)
287 TIGR01517 ATPase-IIB_Ca plasma 52.1 72 0.0016 41.6 10.7 39 633-672 579-617 (941)
288 TIGR02247 HAD-1A3-hyp Epoxide 51.7 8.1 0.00018 40.3 1.7 35 781-822 155-189 (211)
289 TIGR03333 salvage_mtnX 2-hydro 51.6 15 0.00032 38.8 3.6 37 777-824 142-178 (214)
290 KOG0210 P-type ATPase [Inorgan 50.5 1.1E+02 0.0024 37.8 10.7 146 633-824 658-803 (1051)
291 PF13477 Glyco_trans_4_2: Glyc 50.5 26 0.00056 33.5 4.9 34 242-275 74-108 (139)
292 TIGR01489 DKMTPPase-SF 2,3-dik 50.3 18 0.00039 36.6 4.0 38 634-672 73-110 (188)
293 KOG2116 Protein involved in pl 50.3 20 0.00044 43.5 4.7 81 599-684 527-612 (738)
294 TIGR02137 HSK-PSP phosphoserin 47.4 26 0.00056 36.9 4.7 37 776-823 129-165 (203)
295 PLN02940 riboflavin kinase 47.2 13 0.00027 43.2 2.5 33 603-653 12-44 (382)
296 KOG0206 P-type ATPase [General 47.1 67 0.0015 42.3 9.0 47 767-823 769-815 (1151)
297 COG4567 Response regulator con 45.9 40 0.00086 33.9 5.2 75 461-535 42-124 (182)
298 PF12710 HAD: haloacid dehalog 45.6 11 0.00023 38.4 1.4 33 779-819 157-192 (192)
299 COG0816 Predicted endonuclease 45.3 91 0.002 31.0 7.7 73 391-473 40-112 (141)
300 TIGR01511 ATPase-IB1_Cu copper 44.1 33 0.00072 41.9 5.6 63 599-673 382-444 (562)
301 TIGR01511 ATPase-IB1_Cu copper 43.4 50 0.0011 40.4 6.9 33 779-822 454-486 (562)
302 PF11440 AGT: DNA alpha-glucos 43.0 5.2E+02 0.011 28.9 19.0 264 233-537 52-352 (355)
303 COG3882 FkbH Predicted enzyme 42.3 50 0.0011 39.0 6.1 83 589-672 209-293 (574)
304 PF11019 DUF2608: Protein of u 41.4 52 0.0011 36.0 5.9 83 589-675 6-123 (252)
305 PF06941 NT5C: 5' nucleotidase 41.4 14 0.00031 38.2 1.6 15 602-616 1-16 (191)
306 COG1011 Predicted hydrolase (H 40.9 16 0.00036 38.2 2.0 16 601-616 3-18 (229)
307 TIGR02193 heptsyl_trn_I lipopo 40.8 4.2E+02 0.0091 29.4 13.4 23 456-478 240-262 (319)
308 PRK13478 phosphonoacetaldehyde 40.6 63 0.0014 35.2 6.6 37 781-823 161-197 (267)
309 KOG2134 Polynucleotide kinase 40.3 27 0.00059 40.0 3.6 57 599-658 72-128 (422)
310 PRK09456 ?-D-glucose-1-phospha 40.1 16 0.00034 38.0 1.6 31 780-817 143-173 (199)
311 TIGR00661 MJ1255 conserved hyp 39.8 76 0.0017 35.5 7.2 69 462-539 239-315 (321)
312 PF13242 Hydrolase_like: HAD-h 39.3 36 0.00077 29.4 3.5 34 783-823 9-43 (75)
313 KOG1618 Predicted phosphatase 38.8 30 0.00064 38.7 3.5 41 602-657 35-78 (389)
314 PF06258 Mito_fiss_Elm1: Mitoc 38.7 6.2E+02 0.013 28.5 16.1 194 243-508 58-259 (311)
315 COG5083 SMP2 Uncharacterized p 38.2 19 0.00041 41.7 1.9 80 599-684 372-451 (580)
316 COG3700 AphA Acid phosphatase 38.0 45 0.00097 34.3 4.3 81 589-671 50-151 (237)
317 PRK06769 hypothetical protein; 37.9 48 0.001 33.8 4.8 35 781-822 96-130 (173)
318 PRK08942 D,D-heptose 1,7-bisph 37.6 78 0.0017 32.2 6.3 36 781-823 106-141 (181)
319 PRK10422 lipopolysaccharide co 37.2 6.6E+02 0.014 28.4 15.8 27 452-478 244-270 (352)
320 PRK04128 1-(5-phosphoribosyl)- 36.0 74 0.0016 34.2 6.0 61 589-669 31-93 (228)
321 KOG2884 26S proteasome regulat 35.6 3.9E+02 0.0084 28.6 10.7 133 381-536 83-227 (259)
322 PRK11033 zntA zinc/cadmium/mer 35.1 56 0.0012 41.5 5.7 69 594-674 540-608 (741)
323 PRK05282 (alpha)-aspartyl dipe 35.0 3.3E+02 0.0072 29.4 10.8 112 375-510 3-124 (233)
324 PF13419 HAD_2: Haloacid dehal 33.5 35 0.00075 33.5 2.9 40 633-673 77-116 (176)
325 TIGR01491 HAD-SF-IB-PSPlk HAD- 33.1 68 0.0015 32.7 5.1 39 634-673 81-119 (201)
326 TIGR02254 YjjG/YfnB HAD superf 33.0 76 0.0017 33.0 5.6 14 603-616 2-15 (224)
327 PRK09552 mtnX 2-hydroxy-3-keto 32.9 32 0.0007 36.3 2.7 35 778-823 147-181 (219)
328 KOG3120 Predicted haloacid deh 32.2 42 0.0009 35.8 3.2 19 598-616 9-27 (256)
329 PF13528 Glyco_trans_1_3: Glyc 31.7 3.9E+02 0.0084 29.4 11.3 67 460-534 240-316 (318)
330 TIGR01116 ATPase-IIA1_Ca sarco 31.6 76 0.0016 41.3 6.2 40 633-673 537-576 (917)
331 TIGR01497 kdpB K+-transporting 31.5 59 0.0013 40.6 4.9 71 591-673 415-485 (675)
332 PRK12446 undecaprenyldiphospho 30.9 6.8E+02 0.015 28.5 13.2 70 462-539 244-326 (352)
333 KOG4549 Magnesium-dependent ph 30.6 77 0.0017 30.9 4.4 64 602-671 18-82 (144)
334 PRK05632 phosphate acetyltrans 30.4 3.1E+02 0.0067 34.5 11.0 194 456-686 231-434 (684)
335 PHA03392 egt ecdysteroid UDP-g 30.2 1E+03 0.023 28.7 15.7 75 455-539 350-433 (507)
336 TIGR01454 AHBA_synth_RP 3-amin 29.9 66 0.0014 33.3 4.4 40 633-673 75-114 (205)
337 COG4996 Predicted phosphatase 29.8 67 0.0014 31.5 3.8 15 603-617 1-15 (164)
338 PRK10826 2-deoxyglucose-6-phos 29.7 38 0.00083 35.6 2.6 38 779-823 149-186 (222)
339 TIGR01449 PGP_bact 2-phosphogl 29.6 65 0.0014 33.3 4.3 40 633-673 85-124 (213)
340 KOG2882 p-Nitrophenyl phosphat 28.7 64 0.0014 36.0 4.0 53 603-671 23-75 (306)
341 PF15024 Glyco_transf_18: Glyc 28.7 1.8E+02 0.0039 35.4 8.0 78 456-539 327-431 (559)
342 PRK10840 transcriptional regul 28.0 2.8E+02 0.0061 28.7 8.8 77 461-537 38-125 (216)
343 TIGR01488 HAD-SF-IB Haloacid D 27.8 79 0.0017 31.6 4.4 39 634-673 74-112 (177)
344 PLN02410 UDP-glucoronosyl/UDP- 26.6 3.2E+02 0.0069 32.5 9.8 73 457-539 330-411 (451)
345 PRK10826 2-deoxyglucose-6-phos 26.6 84 0.0018 33.0 4.5 39 633-672 92-130 (222)
346 PLN02919 haloacid dehalogenase 26.3 42 0.00091 44.3 2.5 35 601-653 74-108 (1057)
347 PRK13288 pyrophosphatase PpaX; 25.6 82 0.0018 32.8 4.2 39 633-672 82-120 (214)
348 PLN00414 glycosyltransferase f 25.3 2.9E+02 0.0063 32.9 9.1 108 456-573 317-441 (446)
349 KOG1615 Phosphoserine phosphat 25.0 1.1E+02 0.0024 32.2 4.7 44 631-675 86-129 (227)
350 KOG1615 Phosphoserine phosphat 24.7 53 0.0012 34.4 2.4 45 770-823 150-194 (227)
351 COG1168 MalY Bifunctional PLP- 24.7 1.2E+03 0.025 27.3 14.9 78 410-489 159-240 (388)
352 COG4359 Uncharacterized conser 24.5 55 0.0012 34.0 2.4 39 632-671 72-110 (220)
353 TIGR03351 PhnX-like phosphonat 24.5 75 0.0016 33.2 3.7 39 633-672 87-125 (220)
354 TIGR01548 HAD-SF-IA-hyp1 haloa 24.1 88 0.0019 32.2 4.0 36 637-673 110-145 (197)
355 COG0546 Gph Predicted phosphat 24.0 90 0.0019 33.0 4.1 38 634-672 90-127 (220)
356 PRK11590 hypothetical protein; 23.4 1.2E+02 0.0027 31.7 5.0 43 635-678 97-144 (211)
357 TIGR01422 phosphonatase phosph 23.2 80 0.0017 34.0 3.6 38 633-671 99-136 (253)
358 PRK13587 1-(5-phosphoribosyl)- 23.2 1.5E+02 0.0033 31.9 5.7 60 588-669 148-212 (234)
359 COG2503 Predicted secreted aci 22.8 96 0.0021 33.7 3.9 68 600-671 77-160 (274)
360 TIGR01662 HAD-SF-IIIA HAD-supe 22.6 93 0.002 29.7 3.6 38 779-823 86-125 (132)
361 PRK13222 phosphoglycolate phos 22.5 1.1E+02 0.0023 31.9 4.4 40 633-673 93-132 (226)
362 TIGR01545 YfhB_g-proteo haloac 22.4 95 0.0021 32.8 3.9 38 776-823 159-196 (210)
363 PLN02645 phosphoglycolate phos 22.3 1.9E+02 0.004 32.5 6.4 35 781-822 233-268 (311)
364 TIGR02253 CTE7 HAD superfamily 22.2 1E+02 0.0022 32.1 4.1 39 633-672 94-132 (221)
365 cd04248 AAK_AK-Ectoine AAK_AK- 21.8 3E+02 0.0065 31.1 7.7 47 597-659 152-198 (304)
366 PRK14988 GMP/IMP nucleotidase; 21.7 1.8E+02 0.0039 30.9 5.9 35 633-668 93-127 (224)
367 PRK06698 bifunctional 5'-methy 21.4 1.8E+02 0.004 34.5 6.5 64 780-935 387-456 (459)
368 TIGR02399 salt_tol_Pase glucos 21.3 1.3E+02 0.0028 34.1 4.7 49 598-659 4-52 (389)
369 COG0474 MgtA Cation transport 21.3 3.4E+02 0.0074 35.5 9.3 38 634-672 548-585 (917)
370 PLN02770 haloacid dehalogenase 21.0 1.2E+02 0.0025 32.8 4.3 39 633-672 108-146 (248)
371 TIGR01428 HAD_type_II 2-haloal 20.8 1.2E+02 0.0026 31.0 4.3 38 634-672 93-130 (198)
372 PRK01122 potassium-transportin 20.7 1.2E+02 0.0027 37.9 5.0 69 593-673 416-484 (679)
373 KOG4626 O-linked N-acetylgluco 20.6 5.1E+02 0.011 32.1 9.5 162 389-576 772-944 (966)
374 TIGR01261 hisB_Nterm histidino 20.6 63 0.0014 32.7 2.0 37 780-823 105-141 (161)
375 PRK09581 pleD response regulat 20.2 1.3E+03 0.028 26.3 13.7 78 461-538 35-122 (457)
No 1
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=100.00 E-value=1.6e-184 Score=1664.24 Aligned_cols=911 Identities=80% Similarity=1.241 Sum_probs=830.8
Q ss_pred CCCCCcCCCCC-CCchHHHHHHHHHHHhhh-cccccCCC-----CCCcccccccccccCCCCCCcchhhccCCC----CC
Q 002285 25 MPGNKYNSSPL-TPRTRLERLLRERELRKN-RSFLQNEG-----EPDFFASESFLNASESWGPIDEEEFAGTRS----ST 93 (942)
Q Consensus 25 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~ 93 (942)
||||+|+|++. .+++|||||+||||+|+. +++..... ..+.++++....+.++.+.+.+++++++.+ .+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (934)
T PLN03064 1 MPGNKYNGQSSVNPTSRVERLLRERELRKSERSSNANDDLDTNAGSEAFENDLRLSEGDNDSSSHVEQLLEGAAAESALP 80 (934)
T ss_pred CCCcccCCCCCCCCCchHHHHHHHHHHHhhhcccccccccccchhhhhhhhhccccccccccccchHHHhhhhhhhccCC
Confidence 89999999985 557799999999999998 55442222 448899999999999999999999999874 55
Q ss_pred CCCcccCCCC--CCeEEEEECCCccceeecCCCcEEEEecCCchHHhhcccccCCcEEEEeCCCCCCCchhhHHHHHhhc
Q 002285 94 DNGERLEGRC--KQRLLVVANRLPVSAVRRGEDSWQLEISVGGLVSALLGVREFEARWIGWAGVNVPDEIGQKALTKALA 171 (942)
Q Consensus 94 ~~~~~~~~~~--~~rlivvsnrlP~~~~~~~~~~~~~~~~~ggL~~~l~~~~~~~~~WvGw~g~~~~~~~~~~~~~~~l~ 171 (942)
+++++++++. ++||||||||||+.++++++|.|++++++|||+++|.+++..+++||||+|..+++++++..++..+.
T Consensus 81 ~~~~~~~~~~~~~~rlIiVSNRlPv~~~~~~~g~~~~~~s~GGLvsaL~~~~~~~~~WVGw~g~~~~~~~~~~~~~~~l~ 160 (934)
T PLN03064 81 DGCERQEGRRPLRQRLLVVANRLPVSAVRRGEDSWSLEISAGGLVSALLGVKEFEARWIGWAGVNVPDEVGQKALTKALA 160 (934)
T ss_pred cccccccCCCCCCCCEEEEECCCCcceeecCCCceEEeECCCCcHHHhcccccCCeEEEeeCCCCCCCcchhHHHHHHhc
Confidence 8999999874 79999999999999988778999999999999999999966799999999988776555666777788
Q ss_pred CccEEEeecChHHHHHHhhhhhhhcccccccCCCCCcccccccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCEEEEcCC
Q 002285 172 EKRCIPVFLDEETVHQYYNGYCNNMLWPLFHYLGLPQEDRLATTRSFQSQFDAYKRANQMFAKVVNNIYEEGDVVWCHDY 251 (942)
Q Consensus 172 ~~~~~pV~l~~~~~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~DiIwvHDy 251 (942)
+|+|+||||+++++++||+||||++|||+|||++.++.++.+..+.++.+|++|++||++||++|++.++++|+||||||
T Consensus 161 ~~~~~pV~l~~~~~~~~Y~gfcn~~LWPlfHy~~~~~~~~~~~~~~~~~~w~~Y~~vN~~FA~~i~~~~~~gD~VWVHDY 240 (934)
T PLN03064 161 EKRCIPVFLDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYKKANQMFADVVNEHYEEGDVVWCHDY 240 (934)
T ss_pred cCceEEEeCCHHHHHHHHHHhhhcccchhhcCcCCCcccccccccccHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEecc
Confidence 99999999999999999999999999999999865443333333334456999999999999999999999999999999
Q ss_pred chhhHHHHHHhhCCCCeEEEEeccCCCChhHhhcCCchHHHHHHhhhccEEeecCHHHHHHHHHHHHHHhccccCCCcee
Q 002285 252 HLMFLPQCLKEYNNNMKVGWFLHTPFPSSEIHRTLPSRTELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVE 331 (942)
Q Consensus 252 hL~llp~~Lr~~~p~~~I~~flH~PfP~~e~fr~lp~r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~l~~~~~~~~i~ 331 (942)
|||+||.+||++.|+++||||||||||++|+||+||+|++||+|||+||+|||||++|++||++||.|++|++....++.
T Consensus 241 HL~LlP~~LR~~~p~~~IGfFlHiPFPs~Eifr~LP~r~elL~glL~aDlIGFqT~~y~rhFl~~c~rlLg~~~~~~~v~ 320 (934)
T PLN03064 241 HLMFLPKCLKEYNSNMKVGWFLHTPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVE 320 (934)
T ss_pred hhhHHHHHHHHhCCCCcEEEEecCCCCChHHHhhCCcHHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHhCccccCCeEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998888899
Q ss_pred cCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHhcCCceEEEeecccccCCHHHHHHHHHHhHHhCCCCCCcEE
Q 002285 332 DQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPSWRDKVV 411 (942)
Q Consensus 332 ~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi~~lL~Af~~ll~~~P~~~~~vv 411 (942)
++||.++|.++|+|||++.|...+..+++++++++++++++++++|++|||||+.|||.++|+||++||++||+|+++++
T Consensus 321 ~~Gr~v~V~~~PiGID~~~f~~~~~~~~v~~~~~~lr~~~~g~kiIlgVDRLD~~KGI~~kL~AfE~fL~~~Pe~r~kVV 400 (934)
T PLN03064 321 DQGRLTRVAAFPIGIDSDRFIRALETPQVQQHIKELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPEWRDKVV 400 (934)
T ss_pred ECCEEEEEEEEeCEEcHHHHHHHhcChhHHHHHHHHHHHhCCceEEEEeeccccccCHHHHHHHHHHHHHhCccccCCEE
Confidence 99999999999999999999999888999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHH
Q 002285 412 LIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFV 491 (942)
Q Consensus 412 Lvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEam 491 (942)
||||++|+|+++++|++|++++.++|++||++||+.+|.||+|+...++++++.+||++|||||+||++||||||++|||
T Consensus 401 LvQIa~psr~~v~eY~~l~~~V~~~V~rIN~~fg~~~w~Pv~~~~~~l~~eeL~AlY~~ADV~lvTslrDGmNLva~Eyv 480 (934)
T PLN03064 401 LLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEFV 480 (934)
T ss_pred EEEEcCCCCCCcHHHHHHHHHHHHHHHHHhhhccCCCcceEEEeccCCCHHHHHHHHHhCCEEEeCccccccCchHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccCCCceEEEeCCCCcccccCCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHHhcCHHHHHHHHHHHHH
Q 002285 492 ACQASKKGVLILSEFAGAAQSLGAGAILVNPWNITEVASSIGYALNMPADEREKRHLHNFMHVTTHTSQEWAATFVSELN 571 (942)
Q Consensus 492 A~~~~~~G~lIlSe~~G~~~~lg~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~L~ 571 (942)
|||.+++|+||+|||+|++++|+.+|++|||||++++|+||.++|+|+++||++|+++++++|.+||+.+|+++|+.+|.
T Consensus 481 a~~~~~~GvLILSEfaGaa~~L~~~AllVNP~D~~~vA~AI~~AL~M~~~Er~~r~~~~~~~V~~~d~~~Wa~~fl~~L~ 560 (934)
T PLN03064 481 ACQDSKKGVLILSEFAGAAQSLGAGAILVNPWNITEVAASIAQALNMPEEEREKRHRHNFMHVTTHTAQEWAETFVSELN 560 (934)
T ss_pred HhhcCCCCCeEEeCCCchHHHhCCceEEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHH
Confidence 99999999999999999999997789999999999999999999999999999999999999999999999999999999
Q ss_pred HhHHHhhhccccCCCCCChhhhhhhhcccCCEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCC
Q 002285 572 DTIVEAQIRTRQVPPSLPIKGAVDSYLQSNNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMT 651 (942)
Q Consensus 572 ~~~~~~~~~~~~~~~~l~~~~~~~~y~~s~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~ 651 (942)
.+..+...+..+..+.|+.+.++++|++++++||||||||||++++++|.++.+++.++.+.++++++++|++|+++++|
T Consensus 561 ~~~~~~~~~~~~~~~~l~~~~~~~~y~~a~~RLlfLDyDGTLap~~~~P~~~~~~~~~~~a~p~p~l~~~L~~L~~dp~n 640 (934)
T PLN03064 561 DTVVEAQLRTRQVPPQLPPEDAIQRYLQSNNRLLILGFNATLTEPVDTPGRRGDQIKEMELRLHPELKEPLRALCSDPKT 640 (934)
T ss_pred HHHhhhhccccccCCCCCHHHHHHHHHhccceEEEEecCceeccCCCCcccccccccccccCCCHHHHHHHHHHHhCCCC
Confidence 98776666666667899999999999999999999999999999999996556666666788999999999999999999
Q ss_pred eEEEEcCCChhhHHHhhcccCceEEeecceEEEeCCCceeecccCCCChhHHHHHHHHHHHHHhcCCCeeeeeecceEEE
Q 002285 652 TVVVLSGSDRNVLDDNFGEYNMWLAAENGMFLRLTTGEWMTTMPENLNMDWVDSVKHVFEYFTERTPRSHFEVRETSLVW 731 (942)
Q Consensus 652 ~V~IvSGR~~~~L~~~~~~~~l~liaehG~~ir~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~r~~Gs~iE~K~~sl~~ 731 (942)
+|+|+|||++++|++||+.+++++||+||++++.+++.|...+++..+..|++.+..+|++|++++||++||+|+++++|
T Consensus 641 ~VaIVSGR~~~~Le~~fg~~~L~LaAEHG~~~R~~~~~w~~~~~~~~~~~W~~~v~~ile~~~eRtPGS~IE~K~~SLaw 720 (934)
T PLN03064 641 TIVVLSGSDRSVLDENFGEFDMWLAAENGMFLRHTKGEWMTTMPEHLNMDWVDSVKHVFEYFTERTPRSHFETRETSLVW 720 (934)
T ss_pred eEEEEeCCCHHHHHHHhCCCCceEEeeCCeEEecCCCcceeccccccchHHHHHHHHHHHHHHhcCCCcEEEEcCcEEEE
Confidence 99999999999999999999999999999999987889985443455678999999999999999999999999999999
Q ss_pred EEeccchHHhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEECCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCC
Q 002285 732 NYKYADLEFGRLQARDILQHLWSGPISNASVDVVQGGRSVEVRAVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFL 811 (942)
Q Consensus 732 hyr~ad~e~~~~qa~el~~~L~~~~~~~~~v~v~~G~~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d 811 (942)
|||++||+++..|+++++++|+...+.+.+++|+.|+++|||+|.|+|||.|+++||+++...+.+..++|||+|+|| |
T Consensus 721 HYR~ADpe~g~~qA~el~~~L~~~~~~~~~v~V~~Gk~VVEVrP~gvnKG~Av~~ll~~~~~~~~~~~~~DFvlc~GD-d 799 (934)
T PLN03064 721 NYKYADVEFGRLQARDMLQHLWTGPISNAAVDVVQGSRSVEVRPVGVTKGAAIDRILGEIVHSKSMTTPIDYVLCIGH-F 799 (934)
T ss_pred EecCCChhhHHHHHHHHHHHHHhhhccCCCcEEEeCCeEEEEEcCCCCHHHHHHHHHHhhhhccccCCCCCEEEEeCC-C
Confidence 999999999999999999998555555668999999999999999999999999999987533322246899999999 8
Q ss_pred CC-CHHHHHhcCcCCCCC--CCCCCC---CcccccccccccccCCccCCCCccc-ccccccchhhhhhcccccC-CCccc
Q 002285 812 QK-DEDIYTFFEPELPFE--SPAGPR---ANAADHLRRSSISQIPQAKSGPKVR-FRKQRSLSSIERKVSNYLT-GGIWR 883 (942)
Q Consensus 812 ~n-DEdMF~~~~~~~~~~--~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~ 883 (942)
.+ |||||+++...+|.+ +.++++ +.+.|.+|+|+ ++.|+.+++++.+ .++|++.++++++..+|.+ .|+.+
T Consensus 800 ~~~DEdmF~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 878 (934)
T PLN03064 800 LGKDEDIYTFFEPELPSDSPAIARSRSPDGLKSSGDRRPS-GKLPSSRSNSKNSQGKKQRSLLSSAKSGVNHAASHGSDR 878 (934)
T ss_pred CCCcHHHHHHHhccCCcccccccccccCCcccCCcccccc-CCCccccccccccccccCCcccccccccccccccCCccc
Confidence 75 999999999988865 444444 66778888886 7778888888866 9999999999999888866 56777
Q ss_pred ccccccccccCCCcccccCCCceEEEEeCCCCCccceecCCHHHHHHHHHHhhhCcCC
Q 002285 884 PAMRDRMTLNEGSSVLDLRGENYFSCTVSRKRSNARYFLGSSGDVVTLLNELAECPQS 941 (942)
Q Consensus 884 ~~~~~~~~~~~~~~~~~~~~~~~~t~~VG~~~s~A~y~l~~~~~V~~~L~~L~~~~~~ 941 (942)
+.+++.++ .+++|++++|||||+||+|+|+|+|+|++++||+.||++|+++..+
T Consensus 879 ~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 932 (934)
T PLN03064 879 RPSPEKIG----WSVLDLKGENYFSCAVGRKRSNARYLLGSSDDVVSFLKELANASSS 932 (934)
T ss_pred cCCccccc----cccccccCcceEEEEeccccccceeecCCHHHHHHHHHHHhccccC
Confidence 76666655 4999999999999999999999999999999999999999988754
No 2
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=100.00 E-value=5.9e-156 Score=1424.35 Aligned_cols=746 Identities=37% Similarity=0.679 Sum_probs=668.6
Q ss_pred CCCeEEEEECCCccceeecCC--CcEEEEecCCchHHhhccc-c--cCCcEEEEeCCCCCCCchhhHHHHHhhcCccEEE
Q 002285 103 CKQRLLVVANRLPVSAVRRGE--DSWQLEISVGGLVSALLGV-R--EFEARWIGWAGVNVPDEIGQKALTKALAEKRCIP 177 (942)
Q Consensus 103 ~~~rlivvsnrlP~~~~~~~~--~~~~~~~~~ggL~~~l~~~-~--~~~~~WvGw~g~~~~~~~~~~~~~~~l~~~~~~p 177 (942)
+++||||||||||+.++++++ ++|++++++|||+++|.++ . ..+++||||+|..++.+++......++.+|+|+|
T Consensus 58 ~~~rliiVsnrlPv~~~~~~~g~~~~~~~~~~ggL~~~l~~~~~~~~~~~~wvG~~~~~~~~~~~~~~~~~l~~~~~~~p 137 (854)
T PLN02205 58 PKDRIIIVANQLPIRAQRKSDGSKGWIFSWDENSLLLQLKDGLGDDEIEVIYVGCLKEEIHLNEQEEVSQILLETFKCVP 137 (854)
T ss_pred CCCcEEEEEccCceEEEEcCCCCcceEEEeCCCchHHHHhhhhhcccCceEEEEecCCCCCchhhhhHHHHHhcCceEEE
Confidence 468999999999999988643 6899999999999999976 3 3789999999987776444433355667899999
Q ss_pred eecChHHHHHHhhhhhhhcccccccCCC-CCcccccccchhhHH-HHHHHHHHHHHHHHHHHhhcCC-CCEEEEcCCchh
Q 002285 178 VFLDEETVHQYYNGYCNNMLWPLFHYLG-LPQEDRLATTRSFQS-QFDAYKRANQMFAKVVNNIYEE-GDVVWCHDYHLM 254 (942)
Q Consensus 178 V~l~~~~~~~~Y~gf~n~~LWPlfH~~~-~~~~~~~~~~~~~~~-~w~~Y~~vN~~fa~~i~~~~~~-~DiIwvHDyhL~ 254 (942)
|||+++++++||+||||++|||+|||+. ..+. ....|++ .|++|++||+.||++|++.+++ +|+|||||||||
T Consensus 138 v~l~~~~~~~~Y~gf~n~~LWPlfH~~~~~~~~----~~~~f~~~~w~~Y~~vN~~FA~~v~~~~~~~~d~VWVhDYhL~ 213 (854)
T PLN02205 138 TFLPPDLFTRYYHGFCKQQLWPLFHYMLPLSPD----LGGRFNRSLWQAYVSVNKIFADRIMEVINPEDDFVWIHDYHLM 213 (854)
T ss_pred eeCCHHHHHHHHHhhhhccccchhccCCCCCcc----ccccccHHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCchhh
Confidence 9999999999999999999999999994 3221 1124765 4999999999999999999998 699999999999
Q ss_pred hHHHHHHhhCCCCeEEEEeccCCCChhHhhcCCchHHHHHHhhhccEEeecCHHHHHHHHHHHHHHhccccCC----Cce
Q 002285 255 FLPQCLKEYNNNMKVGWFLHTPFPSSEIHRTLPSRTELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTP----EGV 330 (942)
Q Consensus 255 llp~~Lr~~~p~~~I~~flH~PfP~~e~fr~lp~r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~l~~~~~~----~~i 330 (942)
++|.+||+++|+++||||||+|||++|+||+||||++||+|||+||+|||||++|++||++||+|++|+++.. .++
T Consensus 214 llP~~LR~~~~~~~IgfFlHiPFPs~eifr~LP~r~eiL~glL~aDlIGFht~~yar~Fl~~~~r~lgl~~~~~~g~~~~ 293 (854)
T PLN02205 214 VLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLSYESKRGYIGL 293 (854)
T ss_pred HHHHHHHhhCCCCcEEEEecCCCCChHHHhhCCcHHHHHHHHhcCCeEEecCHHHHHHHHHHHHHHhCCcccCCCcceeE
Confidence 9999999999999999999999999999999999999999999999999999999999999999999998764 357
Q ss_pred ecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHhc--CCceEEEeecccccCCHHHHHHHHHHhHHhCCCCCC
Q 002285 331 EDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERFA--GRKVMLGVDRLDMIKGIPQKILAFEKFLEENPSWRD 408 (942)
Q Consensus 331 ~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~--~~~iIl~VgRLd~~KGi~~lL~Af~~ll~~~P~~~~ 408 (942)
.|+||.++|.++|+|||++.|......+++++++++++++++ ++++|++|||||+.|||.++|+||++||++||+|++
T Consensus 294 ~~~Gr~v~v~~~PigId~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ilgVDrlD~~KGi~~kl~A~e~~L~~~P~~~g 373 (854)
T PLN02205 294 EYYGRTVSIKILPVGIHMGQLQSVLSLPETEAKVKELIKQFCDQDRIMLLGVDDMDIFKGISLKLLAMEQLLMQHPEWQG 373 (854)
T ss_pred EECCcEEEEEEEeCeEcHHHHHHHhcChhHHHHHHHHHHHhccCCCEEEEEccCcccccCHHHHHHHHHHHHHhCccccC
Confidence 899999999999999999999999888999999999999995 689999999999999999999999999999999999
Q ss_pred cEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCCCCChhHH
Q 002285 409 KVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVTSLRDGMNLVSY 488 (942)
Q Consensus 409 ~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~l 488 (942)
|++||||++|+|+++++|++++.+++++|++||++||+.+|.||+|+++.++++++.+||++|||+|+||+|||||||++
T Consensus 374 kvvlvQia~psr~~~~~y~~~~~ev~~~v~rIN~~fg~~~~~Pv~~~~~~~~~~e~~aly~~ADv~lVT~lRDGMNLva~ 453 (854)
T PLN02205 374 KVVLVQIANPARGKGKDVKEVQAETHSTVKRINETFGKPGYDPIVLIDAPLKFYERVAYYVVAECCLVTAVRDGMNLIPY 453 (854)
T ss_pred CEEEEEEecCCCcccHHHHHHHHHHHHHHHHHHhhcCCCCCceEEEEecCCCHHHHHHHHHhccEEEeccccccccccch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhccC---------------CCceEEEeCCCCcccccCCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHH
Q 002285 489 EFVACQAS---------------KKGVLILSEFAGAAQSLGAGAILVNPWNITEVASSIGYALNMPADEREKRHLHNFMH 553 (942)
Q Consensus 489 EamA~~~~---------------~~G~lIlSe~~G~~~~lg~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~ 553 (942)
||+|||.+ ++|+||+|||+||+++| .++++|||||++++|+||.+||+|+++||+.|+++++++
T Consensus 454 Eyia~~~~~~~~~~~~~~~~~~~~~gvLiLSEfaGaa~~L-~~Ai~VNP~d~~~~a~ai~~AL~m~~~Er~~R~~~~~~~ 532 (854)
T PLN02205 454 EYIISRQGNEKLDKLLGLEPSTPKKSMLVVSEFIGCSPSL-SGAIRVNPWNIDAVADAMDSALEMAEPEKQLRHEKHYRY 532 (854)
T ss_pred heeEEccCccccccccccccccCCCCceEeeeccchhHHh-CcCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 99999963 57999999999999999 789999999999999999999999999999999999999
Q ss_pred HHhcCHHHHHHHHHHHHHHhHHHhh-hcc---------c-----cCCCCCChhhhhhhhcccCCEEEEEecCCccCCCCC
Q 002285 554 VTTHTSQEWAATFVSELNDTIVEAQ-IRT---------R-----QVPPSLPIKGAVDSYLQSNNRLLILGFNATLTAPVD 618 (942)
Q Consensus 554 v~~~~~~~W~~~fl~~L~~~~~~~~-~~~---------~-----~~~~~l~~~~~~~~y~~s~~rLi~lD~DGTL~~~~~ 618 (942)
|.+||+.+|+++||.+|..+++.+. .+. + ..+++|+++.++++|+++++|+|||||||||++...
T Consensus 533 v~~~d~~~W~~~fl~~l~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~l~~~~i~~~y~~~~~rlI~LDyDGTLlp~~~ 612 (854)
T PLN02205 533 VSTHDVGYWARSFLQDLERTCRDHSRRRCWGIGFGLSFRVVALDPNFRKLSMEHIVSAYKRTTTRAILLDYDGTLMPQAS 612 (854)
T ss_pred HhhCCHHHHHHHHHHHHHHHHHHHhhhhhcccccccccccccccccccccCHHHHHHHHHhhcCeEEEEecCCcccCCcc
Confidence 9999999999999999999876531 111 1 115789999999999999999999999999998742
Q ss_pred ccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhccc-CceEEeecceEEEeCCC-ceeecccC
Q 002285 619 FLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEY-NMWLAAENGMFLRLTTG-EWMTTMPE 696 (942)
Q Consensus 619 ~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~-~l~liaehG~~ir~~~~-~w~~~~~~ 696 (942)
....++++++++|++|++++++.|+|+|||++..|+++|+.+ ++++||+||++++..++ .|.... .
T Consensus 613 -----------~~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~~~~l~laaEHG~~ir~~~~~~w~~~~-~ 680 (854)
T PLN02205 613 -----------IDKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSPCEKLGIAAEHGYFLRLKRDVEWETCV-P 680 (854)
T ss_pred -----------ccCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCCCCCeEEEEeCCEEEEeCCCceeeecc-h
Confidence 245788999999999999999999999999999999999997 69999999999996554 787544 2
Q ss_pred CCChhHHHHHHHHHHHHHhcCCCeeeeeecceEEEEEeccchHHhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEEC
Q 002285 697 NLNMDWVDSVKHVFEYFTERTPRSHFEVRETSLVWNYKYADLEFGRLQARDILQHLWSGPISNASVDVVQGGRSVEVRAV 776 (942)
Q Consensus 697 ~~~~~w~~~v~~il~~~~~r~~Gs~iE~K~~sl~~hyr~ad~e~~~~qa~el~~~L~~~~~~~~~v~v~~G~~~vEV~p~ 776 (942)
..+..|++.+..+++.|++++||++||.|+++++||||.+||+++..|++++..++ ...+.+.++.+..|++++||+|+
T Consensus 681 ~~~~~w~~~v~~i~~~y~ertpGs~IE~K~~slv~HyR~adpd~~~~qa~el~~~l-~~~l~~~~~~v~~G~~vvEV~p~ 759 (854)
T PLN02205 681 VADCSWKQIAEPVMQLYTETTDGSTIEDKETALVWCYEDADPDFGSCQAKELLDHL-ESVLANEPVTVKSGQNIVEVKPQ 759 (854)
T ss_pred hhhHHHHHHHHHHHHHHhcCCCchhheecceEEEEehhhCChHHhhhhhHHHHHHH-HHHHhcCceEEEECCcEEEEEeC
Confidence 24568999999999999999999999999999999999999999988899999888 65556667889999999999999
Q ss_pred CCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCcCCCCCCCCCCCCcccccccccccccCCccCCCC
Q 002285 777 GVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEPELPFESPAGPRANAADHLRRSSISQIPQAKSGP 856 (942)
Q Consensus 777 gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 856 (942)
|+|||.|+++|++.+...+ +++|+++|||| |.|||+||++++....
T Consensus 760 gvnKG~Al~~Ll~~~~~~g---~~~d~vl~~GD-D~nDedMF~~~~~~~~------------------------------ 805 (854)
T PLN02205 760 GVSKGLVAKRLLSIMQERG---MLPDFVLCIGD-DRSDEDMFEVITSSMA------------------------------ 805 (854)
T ss_pred CCCHHHHHHHHHHHHHhcC---CCcccEEEEcC-CccHHHHHHHhhhhcc------------------------------
Confidence 9999999999987653222 56799999999 9999999999964200
Q ss_pred cccccccccchhhhhhcccccCCCcccccccccccccCCCcccccCCCceEEEEeCCCCCccceecCCHHHHHHHHHHhh
Q 002285 857 KVRFRKQRSLSSIERKVSNYLTGGIWRPAMRDRMTLNEGSSVLDLRGENYFSCTVSRKRSNARYFLGSSGDVVTLLNELA 936 (942)
Q Consensus 857 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~VG~~~s~A~y~l~~~~~V~~~L~~L~ 936 (942)
|.+ + ....++|||+||.++|+|+|||+|++||.+||+.|+
T Consensus 806 -----------------------g~~----------------~-~~~~~~~~v~VG~~~S~A~y~L~d~~eV~~lL~~L~ 845 (854)
T PLN02205 806 -----------------------GPS----------------I-APRAEVFACTVGQKPSKAKYYLDDTAEIVRLMQGLA 845 (854)
T ss_pred -----------------------CCc----------------c-cccccceeEEECCCCccCeEecCCHHHHHHHHHHHH
Confidence 000 0 011257999999999999999999999999999999
Q ss_pred hCcC
Q 002285 937 ECPQ 940 (942)
Q Consensus 937 ~~~~ 940 (942)
+.+.
T Consensus 846 ~~~~ 849 (854)
T PLN02205 846 SVSE 849 (854)
T ss_pred hcch
Confidence 8664
No 3
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=100.00 E-value=3.8e-155 Score=1418.95 Aligned_cols=782 Identities=71% Similarity=1.182 Sum_probs=687.4
Q ss_pred CCC-CCCeEEEEECCCccceeecCCCcEEEEecCCchHHhhcccccCCcEEEEeCCCCCCCchhhHHHHHhhcCccEEEe
Q 002285 100 EGR-CKQRLLVVANRLPVSAVRRGEDSWQLEISVGGLVSALLGVREFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPV 178 (942)
Q Consensus 100 ~~~-~~~rlivvsnrlP~~~~~~~~~~~~~~~~~ggL~~~l~~~~~~~~~WvGw~g~~~~~~~~~~~~~~~l~~~~~~pV 178 (942)
+.| .++||||||||||+.+.++++|.|++++++|||+++|.+++..+++||||+|..+++++++..+...+.+++|+||
T Consensus 5 ~~~~~~~rliiVsnrlp~~~~~~~~~~~~~~~~~ggl~~al~~~~~~~~~Wvgw~g~~~~~~~~~~~~~~~~~~~~~~pv 84 (797)
T PLN03063 5 DARGERPRLLVVANRLPVSAKRTGEDSWSLEMSPGGLVSALLGVKEFETKWIGWPGVDVHDEIGKAALTESLAEKGCIPV 84 (797)
T ss_pred cCccCCCCEEEEECCCCccceecCCCceEEeeCCCCHHHHHHHHHhcCceEEEeCCCcCCcccchhHHHHHhhcCCeEEe
Confidence 445 5799999999999998877779999999999999999999556999999999876655455566777789999999
Q ss_pred ecChHHHHHHhhhhhhhcccccccCCCCCcccccccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCEEEEcCCchhhHHH
Q 002285 179 FLDEETVHQYYNGYCNNMLWPLFHYLGLPQEDRLATTRSFQSQFDAYKRANQMFAKVVNNIYEEGDVVWCHDYHLMFLPQ 258 (942)
Q Consensus 179 ~l~~~~~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~DiIwvHDyhL~llp~ 258 (942)
|| ++++++||+||||++|||+|||++.++.+..+....++..|++|++||+.||++|++.++++|+|||||||||++|+
T Consensus 85 ~l-~~~~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~~~~~~~~w~~Y~~vN~~FA~~i~~~~~~~d~vWvhDYhL~llp~ 163 (797)
T PLN03063 85 FL-NEVFDQYYNGYCNNILWPIFHYMGLPQEDRHDATRTFESQYDAYKKANRMFLDVVKENYEEGDVVWCHDYHLMFLPQ 163 (797)
T ss_pred eh-HHHHHHHHHHHHhhhcchhhcCcCCCcccccccccccHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEecchhhhHHH
Confidence 99 99999999999999999999998433212111223345569999999999999999999999999999999999999
Q ss_pred HHHhhCCCCeEEEEeccCCCChhHhhcCCchHHHHHHhhhccEEeecCHHHHHHHHHHHHHHhccccCCCceecCCeeeE
Q 002285 259 CLKEYNNNMKVGWFLHTPFPSSEIHRTLPSRTELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGRLTR 338 (942)
Q Consensus 259 ~Lr~~~p~~~I~~flH~PfP~~e~fr~lp~r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~l~~~~~~~~i~~~gr~~~ 338 (942)
+||++.|+++||||+|||||++|+||+||+|++|++|||+||+|||||++|++||+++|+++++++....++.++|+.++
T Consensus 164 ~lR~~~~~~~igfFlHiPFPs~e~fr~lp~r~~il~gll~aDligF~t~~y~r~Fl~~~~r~l~~~~~~~~i~~~gr~~~ 243 (797)
T PLN03063 164 YLKEYNNKMKVGWFLHTPFPSSEIYKTLPSRSELLRAVLTADLIGFHTYDFARHFLSACTRILGVEGTHEGVVDQGKVTR 243 (797)
T ss_pred HHHHhCCCCcEEEEecCCCCCHHHHhhCCCHHHHHHHHhcCCEEEeCCHHHHHHHHHHHHHHhCccccCCceEECCeEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999887778999999999
Q ss_pred EEEeeCccCccccchhcCChhhHHHHHHHHHHhcCCceEEEeecccccCCHHHHHHHHHHhHHhCCCCCCcEEEEEEEcC
Q 002285 339 VAAFPIGIDSDRFVRALELPQVQDHINELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPSWRDKVVLIQIAVP 418 (942)
Q Consensus 339 v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi~~lL~Af~~ll~~~P~~~~~vvLvqi~~p 418 (942)
|.++|+|||++.|.+....+++++....++++++++++|++||||++.||+..+|+||++|++++|+++++++|+||++|
T Consensus 244 I~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~lIl~VgRLd~~KGi~~lL~Afe~lL~~~P~~~~kvvLvqia~p 323 (797)
T PLN03063 244 VAVFPIGIDPERFINTCELPEVKQHMKELKRFFAGRKVILGVDRLDMIKGIPQKYLAFEKFLEENPEWRDKVMLVQIAVP 323 (797)
T ss_pred EEEEecccCHHHHHHHhcChhHHHHHHHHHHhcCCCeEEEEecccccccCHHHHHHHHHHHHHhCccccCcEEEEEEecC
Confidence 99999999999998877667777777788888889999999999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhccCCC
Q 002285 419 TRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKK 498 (942)
Q Consensus 419 srgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~ 498 (942)
+++++++|+++++++++++++||++|++.+|.||+|+.+.++.+++.++|++|||||+||++||||||++|||||+..++
T Consensus 324 sr~~~~~y~~l~~~v~~l~g~In~~~g~~~~~pv~~l~~~v~~~el~aly~~ADvfvvtSlrEGmnLv~lEamA~g~p~~ 403 (797)
T PLN03063 324 TRNDVPEYQKLKSQVHELVGRINGRFGSVSSVPIHHLDCSVDFNYLCALYAITDVMLVTSLRDGMNLVSYEFVACQKAKK 403 (797)
T ss_pred CCCchHHHHHHHHHHHHHHHHhhcccccCCCceeEEecCCCCHHHHHHHHHhCCEEEeCccccccCcchhhHheeecCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998888
Q ss_pred ceEEEeCCCCcccccCCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHHhcCHHHHHHHHHHHHHHhHHHhh
Q 002285 499 GVLILSEFAGAAQSLGAGAILVNPWNITEVASSIGYALNMPADEREKRHLHNFMHVTTHTSQEWAATFVSELNDTIVEAQ 578 (942)
Q Consensus 499 G~lIlSe~~G~~~~lg~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~L~~~~~~~~ 578 (942)
|++|+||++|+++.+|.+|++|||+|++++|+||.++|+|+++||++|+++++++|.+||+.+|++.||.+|.+++.++.
T Consensus 404 gvlVlSe~~G~~~~l~~~allVnP~D~~~lA~AI~~aL~m~~~er~~r~~~~~~~v~~~~~~~Wa~~fl~~l~~~~~~~~ 483 (797)
T PLN03063 404 GVLVLSEFAGAGQSLGAGALLVNPWNITEVSSAIKEALNMSDEERETRHRHNFQYVKTHSAQKWADDFMSELNDIIVEAE 483 (797)
T ss_pred CCEEeeCCcCchhhhcCCeEEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHHHhhhhh
Confidence 99999999999999977999999999999999999999999999999999999999999999999999999999887665
Q ss_pred hccccCCCCCChhhhhhhhcccCCEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcC
Q 002285 579 IRTRQVPPSLPIKGAVDSYLQSNNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSG 658 (942)
Q Consensus 579 ~~~~~~~~~l~~~~~~~~y~~s~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSG 658 (942)
......++.|+...++++|+++++++|||||||||+++.++|. ..+.+.++++++++|++|+++++|.|+|+||
T Consensus 484 ~~~~~~~~~l~~~~~~~~y~~a~~rll~LDyDGTL~~~~~~~~------~p~~a~p~~~l~~~L~~L~~d~~~~V~IvSG 557 (797)
T PLN03063 484 LRTRNIPLELPEQDVIQQYSKSNNRLLILGFYGTLTEPRNSQI------KEMDLGLHPELKETLKALCSDPKTTVVVLSR 557 (797)
T ss_pred hcccCCCCCCCHHHHHHHHHhccCeEEEEecCccccCCCCCcc------ccccCCCCHHHHHHHHHHHcCCCCEEEEEeC
Confidence 5555567899999999999999999999999999999866431 0146789999999999999999999999999
Q ss_pred CChhhHHHhhcccCceEEeecceEEEeCCCceeecccCCCChhHHHHHHHHHHHHHhcCCCeeeeeecceEEEEEeccch
Q 002285 659 SDRNVLDDNFGEYNMWLAAENGMFLRLTTGEWMTTMPENLNMDWVDSVKHVFEYFTERTPRSHFEVRETSLVWNYKYADL 738 (942)
Q Consensus 659 R~~~~L~~~~~~~~l~liaehG~~ir~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~r~~Gs~iE~K~~sl~~hyr~ad~ 738 (942)
|++++|++||+..+++++|+||++++..++.|....++..+..|++.+..+|++|++++||++||+|+++++||||++||
T Consensus 558 R~~~~L~~~~~~~~l~l~aeHG~~~r~~~~~w~~~~~~~~~~~w~~~v~~~l~~~~~rtpGs~iE~K~~sla~HyR~adp 637 (797)
T PLN03063 558 SGKDILDKNFGEYNIWLAAENGMFLRHTSGEWVTTMPEHMNLDWVDGVKNVFKYFTDRTPRSYVEKSETSLVWNYEYADV 637 (797)
T ss_pred CCHHHHHHHhCCCCCcEEEeCCEEEecCCCceeeccccccChhHHHHHHHHHHHHHHhCCCcEEEEcCeEEEEEcCCCCh
Confidence 99999999999989999999999999777889865434456789999999999999999999999999999999999999
Q ss_pred HHhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEECCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCC-CCHHH
Q 002285 739 EFGRLQARDILQHLWSGPISNASVDVVQGGRSVEVRAVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQ-KDEDI 817 (942)
Q Consensus 739 e~~~~qa~el~~~L~~~~~~~~~v~v~~G~~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~-nDEdM 817 (942)
+++..|+++++++|.+..+.+.+++++.||++|||+|.|+|||.|+++||+++...+....++|||+|+|| |. +||+|
T Consensus 638 ~~g~~~a~el~~~l~~~~~~~~~~~v~~Gk~vvEvrp~gvnKG~Av~~ll~~~~~~~~~~~~~dfvl~~Gd-d~~~DEdm 716 (797)
T PLN03063 638 EFGRAQARDMLQHLWAGPISNASVDVVRGQKSVEVHAIGVTKGAAIGRILGEIVHNKSMTTPIDFVFCSGY-FLEKDEDV 716 (797)
T ss_pred HHHHHHHHHHHHHHHHhhccCCCcEEEECCeEEEEEcCCCChHHHHHHHHHHhhhccccCCCCCEEEEeCC-CCCCcHHH
Confidence 99988999999988444445567999999999999999999999999999987322211135799999999 75 69999
Q ss_pred HHhcCcCCCCCCCCCCCCcccccccccccccCCccCCCCcccccccccchhhhhhcccccCCCcccccccccccccCCCc
Q 002285 818 YTFFEPELPFESPAGPRANAADHLRRSSISQIPQAKSGPKVRFRKQRSLSSIERKVSNYLTGGIWRPAMRDRMTLNEGSS 897 (942)
Q Consensus 818 F~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 897 (942)
|+++.....+. ..| .++..+. . +++ .+..
T Consensus 717 F~~l~~~~~~~--------~~~---------~~~~~~~----~---------~~~---------------------~~~~ 745 (797)
T PLN03063 717 YTFFEPEILSK--------KKS---------SSSNYSD----S---------DKK---------------------VSSN 745 (797)
T ss_pred HHhcccccccc--------ccc---------ccccccc----c---------ccc---------------------cccc
Confidence 99996521000 000 0000000 0 000 0011
Q ss_pred ccccCCCceEEEEeCCCCCccceecCCHHHHHHHHHHhhhCcC
Q 002285 898 VLDLRGENYFSCTVSRKRSNARYFLGSSGDVVTLLNELAECPQ 940 (942)
Q Consensus 898 ~~~~~~~~~~t~~VG~~~s~A~y~l~~~~~V~~~L~~L~~~~~ 940 (942)
.+..+.++.|+|+||.++|.|+|||+|++||+++|+.|++...
T Consensus 746 ~~~~~~~~~~~v~VG~~~s~A~y~l~~~~eV~~lL~~l~~~~~ 788 (797)
T PLN03063 746 LVDLKGENYFSCAIGQARTKARYVLDSSNDVVSLLHKLAVANT 788 (797)
T ss_pred ccccccCceEEEEECCCCccCeecCCCHHHHHHHHHHHhccCc
Confidence 2233445789999999999999999999999999999987654
No 4
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=100.00 E-value=4.6e-140 Score=1288.15 Aligned_cols=721 Identities=43% Similarity=0.757 Sum_probs=662.8
Q ss_pred CeEEEEECCCccceeecCCCcEEEEecCCchHHhhccc-ccCCcEEEEeCCCCCCCc--hhhHHHHHhhcCccEEEeecC
Q 002285 105 QRLLVVANRLPVSAVRRGEDSWQLEISVGGLVSALLGV-REFEARWIGWAGVNVPDE--IGQKALTKALAEKRCIPVFLD 181 (942)
Q Consensus 105 ~rlivvsnrlP~~~~~~~~~~~~~~~~~ggL~~~l~~~-~~~~~~WvGw~g~~~~~~--~~~~~~~~~l~~~~~~pV~l~ 181 (942)
+||||||||+|+.+.+++ |.|++++++|||+++|.++ +..+++||||+|...+.. .++..+...+.+|+|+||||+
T Consensus 1 ~~livvsnr~p~~~~~~~-~~~~~~~~~ggl~~~l~~~~~~~~~~wvg~~g~~~~~~~~~~~~~~~~~~~~~~~~~v~l~ 79 (726)
T PRK14501 1 SRLIIVSNRLPVTVVRED-GGVELTPSVGGLATGLRSFHERGGGLWVGWPGLDLEEESEEQRARIEPRLEELGLVPVFLS 79 (726)
T ss_pred CCEEEEEcCCCcceeecC-CceEEeeCCCchHHHHHHHhhcCCeEEEEeCCCCccccchhhhhhhhhhccCceEEEEeCC
Confidence 489999999999987654 5799999999999999998 778999999999766542 222334566789999999999
Q ss_pred hHHHHHHhhhhhhhcccccccCCCCCcccccccchhhHH-HHHHHHHHHHHHHHHHHhhcCCCCEEEEcCCchhhHHHHH
Q 002285 182 EETVHQYYNGYCNNMLWPLFHYLGLPQEDRLATTRSFQS-QFDAYKRANQMFAKVVNNIYEEGDVVWCHDYHLMFLPQCL 260 (942)
Q Consensus 182 ~~~~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~~~~~~~-~w~~Y~~vN~~fa~~i~~~~~~~DiIwvHDyhL~llp~~L 260 (942)
++++++||+||||++|||+|||++... .|++ +|++|++||+.||++|++.++++|+||||||||+++|.+|
T Consensus 80 ~~~~~~~y~gf~n~~lWp~~H~~~~~~--------~~~~~~w~~Y~~vN~~fA~~~~~~~~~~d~vwvhDYhl~l~p~~l 151 (726)
T PRK14501 80 AEEVDRYYEGFCNSTLWPLFHYFPEYT--------EFEDRFWESYERVNQRFAEAIAAIARPGDVVWVHDYQLMLLPAML 151 (726)
T ss_pred HHHHHHHHHHhhhccccchhcccCccc--------CcCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCchhhhHHHHH
Confidence 999999999999999999999995433 3665 4999999999999999999999999999999999999999
Q ss_pred HhhCCCCeEEEEeccCCCChhHhhcCCchHHHHHHhhhccEEeecCHHHHHHHHHHHHHHhccccCCCceecCCeeeEEE
Q 002285 261 KEYNNNMKVGWFLHTPFPSSEIHRTLPSRTELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGRLTRVA 340 (942)
Q Consensus 261 r~~~p~~~I~~flH~PfP~~e~fr~lp~r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~l~~~~~~~~i~~~gr~~~v~ 340 (942)
|++.|+++||||+|+|||++++|++||+|++|++|||+||+|||||++|++||+++|.++++++.....+.+.|+.++|.
T Consensus 152 r~~~~~~~igfFlH~pfP~~~~f~~lp~~~~ll~~ll~~Dligf~t~~~~r~Fl~~~~~~l~~~~~~~~~~~~gr~~~v~ 231 (726)
T PRK14501 152 RERLPDARIGFFLHIPFPSFEVFRLLPWREEILEGLLGADLIGFHTYDYVRHFLSSVLRVLGYETELGEIRLGGRIVRVD 231 (726)
T ss_pred HhhCCCCcEEEEeeCCCCChHHHhhCCChHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHcCCccCCCeEEECCEEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999887777889999999999
Q ss_pred EeeCccCccccchhcCChhhHHHHHHHHHHhcCCceEEEeecccccCCHHHHHHHHHHhHHhCCCCCCcEEEEEEEcCCC
Q 002285 341 AFPIGIDSDRFVRALELPQVQDHINELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPSWRDKVVLIQIAVPTR 420 (942)
Q Consensus 341 viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi~~lL~Af~~ll~~~P~~~~~vvLvqi~~psr 420 (942)
++|+|||++.|.+....+.+.+..+.+|+.++++++|++||||++.||+..+|+||++|++++|+++++++|+||++|++
T Consensus 232 v~p~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~~il~VgRl~~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~v~~~sr 311 (726)
T PRK14501 232 AFPMGIDYDKFHNSAQDPEVQEEIRRLRQDLRGRKIILSIDRLDYTKGIPRRLLAFERFLEKNPEWRGKVRLVQVAVPSR 311 (726)
T ss_pred EEECeEcHHHHHHHhcCchHHHHHHHHHHHcCCCEEEEEecCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCC
Confidence 99999999999988777777777888888888999999999999999999999999999999999999999999999998
Q ss_pred CChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhccCCCce
Q 002285 421 TDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGV 500 (942)
Q Consensus 421 gd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~ 500 (942)
.+.++|+++++++++++++||++|++.+|.||+|+.+.++++++.++|++|||||+||++||||||++|||||+.+++|+
T Consensus 312 ~~~~~~~~l~~~~~~~v~~in~~~~~~~~~pv~~~~~~~~~~~l~~ly~~aDv~v~~S~~EG~~lv~~Eama~~~~~~g~ 391 (726)
T PRK14501 312 TGVPQYQEMKREIDELVGRINGEFGTVDWTPIHYFYRSLPFEELVALYRAADVALVTPLRDGMNLVAKEYVASRTDGDGV 391 (726)
T ss_pred cchHHHHHHHHHHHHHHHHHHhhcCCCCcceEEEEeCCCCHHHHHHHHHhccEEEecccccccCcccceEEEEcCCCCce
Confidence 77799999999999999999999999999999999999999999999999999999999999999999999999877899
Q ss_pred EEEeCCCCcccccCCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHHhcCHHHHHHHHHHHHHHhHHHhhhc
Q 002285 501 LILSEFAGAAQSLGAGAILVNPWNITEVASSIGYALNMPADEREKRHLHNFMHVTTHTSQEWAATFVSELNDTIVEAQIR 580 (942)
Q Consensus 501 lIlSe~~G~~~~lg~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~L~~~~~~~~~~ 580 (942)
+|+|+++|+++++ .+|++|||+|++++|++|.++|+|+.+|++.|++++++++.+||+.+|+++|+..|.+++..+...
T Consensus 392 ~vls~~~G~~~~l-~~~llv~P~d~~~la~ai~~~l~~~~~e~~~r~~~~~~~v~~~~~~~w~~~~l~~l~~~~~~~~~~ 470 (726)
T PRK14501 392 LILSEMAGAAAEL-AEALLVNPNDIEGIAAAIKRALEMPEEEQRERMQAMQERLRRYDVHKWASDFLDELREAAEKNKAF 470 (726)
T ss_pred EEEecccchhHHh-CcCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhhhcc
Confidence 9999999999998 679999999999999999999999999999999999999999999999999999999987664433
Q ss_pred cccCCCCCChhhhhhhhcccCCEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCC
Q 002285 581 TRQVPPSLPIKGAVDSYLQSNNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSD 660 (942)
Q Consensus 581 ~~~~~~~l~~~~~~~~y~~s~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~ 660 (942)
....++.|+.+.+.++|+++++|||+|||||||++...+| ....++++++++|++|++++|+.|+|+|||+
T Consensus 471 ~~~~~~~~~~~~~~~~y~~~~~rLi~~D~DGTL~~~~~~~---------~~~~~~~~~~~~L~~L~~d~g~~V~ivSGR~ 541 (726)
T PRK14501 471 ASKPITPAAAEEIIARYRAASRRLLLLDYDGTLVPFAPDP---------ELAVPDKELRDLLRRLAADPNTDVAIISGRD 541 (726)
T ss_pred ccccCCccCHHHHHHHHHhccceEEEEecCccccCCCCCc---------ccCCCCHHHHHHHHHHHcCCCCeEEEEeCCC
Confidence 3334578899999999999999999999999999987666 4667899999999999998999999999999
Q ss_pred hhhHHHhhcccCceEEeecceEEEeCCCceeecccCCCChhHHHHHHHHHHHHHhcCCCeeeeeecceEEEEEeccchHH
Q 002285 661 RNVLDDNFGEYNMWLAAENGMFLRLTTGEWMTTMPENLNMDWVDSVKHVFEYFTERTPRSHFEVRETSLVWNYKYADLEF 740 (942)
Q Consensus 661 ~~~L~~~~~~~~l~liaehG~~ir~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~r~~Gs~iE~K~~sl~~hyr~ad~e~ 740 (942)
+..|+++|+.+++++||+||++++..++.|.... ..+..|++.+.++++.+.+++||+++|.|+.+++|||+++++++
T Consensus 542 ~~~l~~~~~~~~l~liaenG~~i~~~~~~w~~~~--~~~~~w~~~v~~il~~~~~~~~gs~ie~k~~~l~~~~r~~d~~~ 619 (726)
T PRK14501 542 RDTLERWFGDLPIHLVAEHGAWSRAPGGEWQLLE--PVATEWKDAVRPILEEFVDRTPGSFIEEKEASLAWHYRNADPEL 619 (726)
T ss_pred HHHHHHHhCCCCeEEEEeCCEEEeCCCCceEECC--CcchhHHHHHHHHHHHHHhcCCCcEEEEcceEEEEEccCCCHHH
Confidence 9999999998899999999999997778887654 23678999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEECCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHh
Q 002285 741 GRLQARDILQHLWSGPISNASVDVVQGGRSVEVRAVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTF 820 (942)
Q Consensus 741 ~~~qa~el~~~L~~~~~~~~~v~v~~G~~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~ 820 (942)
+..+++++.+++ ...+.+..+.++.|+.++||+|+++|||.|++++++. .++++++|||| |.|||+||++
T Consensus 620 ~~~~a~~l~~~l-~~~~~~~~~~v~~g~~~veV~p~~vnKG~al~~ll~~--------~~~d~vl~~GD-~~nDe~Mf~~ 689 (726)
T PRK14501 620 GEARANELILAL-SSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLLEA--------GPYDFVLAIGD-DTTDEDMFRA 689 (726)
T ss_pred HHHHHHHHHHHH-HHHhcCCCeEEEECCeEEEEEECCCCHHHHHHHHHhc--------CCCCEEEEECC-CCChHHHHHh
Confidence 988888888888 6656666788999999999999999999999999983 35799999999 9999999998
Q ss_pred cCcCCCCCCCCCCCCcccccccccccccCCccCCCCcccccccccchhhhhhcccccCCCcccccccccccccCCCcccc
Q 002285 821 FEPELPFESPAGPRANAADHLRRSSISQIPQAKSGPKVRFRKQRSLSSIERKVSNYLTGGIWRPAMRDRMTLNEGSSVLD 900 (942)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 900 (942)
+..
T Consensus 690 ~~~----------------------------------------------------------------------------- 692 (726)
T PRK14501 690 LPE----------------------------------------------------------------------------- 692 (726)
T ss_pred ccc-----------------------------------------------------------------------------
Confidence 742
Q ss_pred cCCCceEEEEeCCCCCccceecCCHHHHHHHHHHhhh
Q 002285 901 LRGENYFSCTVSRKRSNARYFLGSSGDVVTLLNELAE 937 (942)
Q Consensus 901 ~~~~~~~t~~VG~~~s~A~y~l~~~~~V~~~L~~L~~ 937 (942)
.+++|+||.++|.|+|+|+++++|..+|+.|++
T Consensus 693 ----~~~~v~vG~~~s~A~~~l~~~~eV~~~L~~l~~ 725 (726)
T PRK14501 693 ----TAITVKVGPGESRARYRLPSQREVRELLRRLLD 725 (726)
T ss_pred ----CceEEEECCCCCcceEeCCCHHHHHHHHHHHhc
Confidence 269999999999999999999999999999975
No 5
>KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.6e-118 Score=1063.04 Aligned_cols=722 Identities=48% Similarity=0.814 Sum_probs=666.7
Q ss_pred CCeEEEEECCCccce-eecCCCcEEEEecCCchHHhhccc-ccCCcEEEEeCCCCCCCchhhHHHHHhhcCccEEEeecC
Q 002285 104 KQRLLVVANRLPVSA-VRRGEDSWQLEISVGGLVSALLGV-REFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLD 181 (942)
Q Consensus 104 ~~rlivvsnrlP~~~-~~~~~~~~~~~~~~ggL~~~l~~~-~~~~~~WvGw~g~~~~~~~~~~~~~~~l~~~~~~pV~l~ 181 (942)
..|+|+|||+||+.+ .+..++.|.++++.|||++++.+. ...+..||||.|..++++++.......+...+|+||+++
T Consensus 2 ~~r~i~vsn~lp~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vg~~~~~~~~~~~~~~~~~~~~~~~~~pv~~~ 81 (732)
T KOG1050|consen 2 RPRIIVVSNRLPLKASKRTDTGKWSFSFSPGSLVSQLKGIFREMEVKWVGPLGDELDDSEKEDVSQELLEEFDSVPVFLD 81 (732)
T ss_pred CceEEEEEccCceecccccCCCceeeecCCCCchhhhhcccccceeeEEeeccccCchhhHhHhhhhhhhhcCceeeecC
Confidence 579999999999998 455688999999999999999987 777899999999888887777777778889999999999
Q ss_pred hHHHHHHhhhhhhhcccccccCCCCCcccccccchhhHH-HHHHHHHHHHHHHHHHHhhcCCCCEEEEcCCchhhHHHHH
Q 002285 182 EETVHQYYNGYCNNMLWPLFHYLGLPQEDRLATTRSFQS-QFDAYKRANQMFAKVVNNIYEEGDVVWCHDYHLMFLPQCL 260 (942)
Q Consensus 182 ~~~~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~~~~~~~-~w~~Y~~vN~~fa~~i~~~~~~~DiIwvHDyhL~llp~~L 260 (942)
++...++|++|||++|||+|||...+..... . .|+. .|.+|.++|+.|+++|++.++++|+|||||||||++|.++
T Consensus 82 ~~~~~~~y~~~~~~ilwP~~hy~~~p~~~~~--~-~~~~~~w~~y~~~n~~f~d~ive~~~~~d~vwihdyhlmllp~~l 158 (732)
T KOG1050|consen 82 DELFDSYYNGYCKSILWPLFHYMLIPSEPAF--K-LFDLELWKAYVKVNQAFADKIVEVYEEGDIVWIHDYHLMLLPQML 158 (732)
T ss_pred CchhhhhhhhhhhhcccceeecccCCCchhh--h-hhHHHHHHHHHHHhHHHHHHHHHhccCCCcEEEEcchhhccchhh
Confidence 9999999999999999999999933332211 1 3443 5999999999999999999999999999999999999999
Q ss_pred HhhCCCCeEEEEeccCCCChhHhhcCCchHHHHHHhhhccEEeecCHHHHHHHHHHHHHHhccccC----CCceecCCee
Q 002285 261 KEYNNNMKVGWFLHTPFPSSEIHRTLPSRTELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGT----PEGVEDQGRL 336 (942)
Q Consensus 261 r~~~p~~~I~~flH~PfP~~e~fr~lp~r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~l~~~~~----~~~i~~~gr~ 336 (942)
|++..+++||||+|.|||++|+|+++|.|++|+.+|+++|+||||+++|+|||+++|.|+++++.. ..++.+.||.
T Consensus 159 r~~~~~~~ig~flhspfpssEi~r~lp~r~eIl~gll~~~~i~f~t~d~arhFls~c~R~l~~~~~s~~~~~~v~~rgr~ 238 (732)
T KOG1050|consen 159 RERFNSAKIGFFLHSPFPSSEIYRCLPVRKEILRGLLYDDLLGFHTDDYARHFLSTCSRLLGLEVASKFPTAGVSGRGRD 238 (732)
T ss_pred hcccccceEEEeccCCCChHHHHHhcccHHHHHHhhhccCccccccccHHHHHHHHHHHHHHhhhhccCCcceEEeccce
Confidence 999999999999999999999999999999999999999999999999999999999999999876 4468999999
Q ss_pred eEEEEeeCccCccccchhcCChhhHHHHHHHHHHhcCCceEEEeecccccCCHHHHHHHHHHhHHhCCCCCCcEEEEEEE
Q 002285 337 TRVAAFPIGIDSDRFVRALELPQVQDHINELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPSWRDKVVLIQIA 416 (942)
Q Consensus 337 ~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi~~lL~Af~~ll~~~P~~~~~vvLvqi~ 416 (942)
+.|.++|+|||+.+|......+.+..+..+++..++++++|++|||+|+.||+.+++.||++++++||+|+++++|+||+
T Consensus 239 ~~v~~~pigid~~r~v~~~~~~~~~~~~~ei~~~~~g~klilgvD~~d~~kg~~~Kl~a~e~~L~~~pe~~~kVvliqi~ 318 (732)
T KOG1050|consen 239 VSVKALPIGIDVQRFVKLLELPYVGSKGMEIKEPFKGKKLILGVDRLDSIKGIQLKLLAFEQFLEEYPEWIDKVVLIQIE 318 (732)
T ss_pred eeeeecccccchHHhhccccchhHHHHHHHHhhhccCCceEecccccccccCchHHHHHHHHHHHhChhhhceEEEEEEe
Confidence 99999999999999999998888889999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhccC
Q 002285 417 VPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQAS 496 (942)
Q Consensus 417 ~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~ 496 (942)
.|+++++++|++++.++...+.+||.+|++..+.||+++...++..++.++|.+||+++++|++|||||+++||++||.+
T Consensus 319 ~~~~~~~~~v~~~k~~v~~~v~rIn~~f~~~~~~pV~~~~~~~~~~~l~a~~~Vaev~~v~s~rdGmnl~~~e~i~~~~~ 398 (732)
T KOG1050|consen 319 NPKRTDGKEVEELKFCVSVHVRRINEKFGSASYQPVHSLLKDLPFLELLALYKVAEVCPVTSWRDGMNLVFLEYILCQEN 398 (732)
T ss_pred cCCcccchHHHHHHHHhHhhhhhhhhccCCcccceEEEeeccCCHHHHhhhHHhhhheeecccccccchhhhHHHHhhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred CCceEEEeCCCCcccccCCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHHhcCHHHHHHHHHHHHHHhHHH
Q 002285 497 KKGVLILSEFAGAAQSLGAGAILVNPWNITEVASSIGYALNMPADEREKRHLHNFMHVTTHTSQEWAATFVSELNDTIVE 576 (942)
Q Consensus 497 ~~G~lIlSe~~G~~~~lg~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~L~~~~~~ 576 (942)
+.+++|+|+|+|+.+.++.+++++||||.++++.+|..+|+|+.+++..|+...+.++..++...|+..|+..|.+.++.
T Consensus 399 ~~~~lVlsef~G~~~tl~d~aivvnpw~~~~~~~~i~~al~~s~~e~~~r~~~~~~~v~~~~~~~W~~~~~~~l~~~~~~ 478 (732)
T KOG1050|consen 399 KKSVLVLSEFIGDDTTLEDAAIVVNPWDGDEFAILISKALTMSDEERELREPKHYKYVSTHDVVYWAKSFLQGLKRIWKV 478 (732)
T ss_pred cCCceEEeeeccccccccccCEEECCcchHHHHHHHHHHhhcCHHHHhhcchhhhhhhcchhHHHHHHHHHHhhhhhhhh
Confidence 88999999999999999888999999999999999999999999999999999999999999999999999999998887
Q ss_pred hhhccccCCCCCChhhhhhhhcccCCEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEE
Q 002285 577 AQIRTRQVPPSLPIKGAVDSYLQSNNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVL 656 (942)
Q Consensus 577 ~~~~~~~~~~~l~~~~~~~~y~~s~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~Iv 656 (942)
.. ...++.+.|..+.++..|+++++|+|+||||||+++. +| ..+...|+.|++||+|.|+|+
T Consensus 479 ~~-~~~~~~~~l~~~~~i~~y~~s~~rli~ldyd~t~~~~--~~---------------~~~~~~l~~L~~dp~n~v~i~ 540 (732)
T KOG1050|consen 479 GF-LGFRVTPLLTAEHIVSDYKKSKKRLILLDYDLTLIPP--RS---------------IKAISILKDLCSDPKNIVYIV 540 (732)
T ss_pred cc-cccccccccChhHhhhhhhhccceEEEecccccccCC--CC---------------chHHHHHHHHhcCCCCeEEEE
Confidence 66 4344557799999999999999999999999888765 22 119999999999999999999
Q ss_pred cCCChhhHHHhhccc-CceEEeecceEEEeCCCceeecccCCCChhHHHHHHHHHHHHHhcCCCeeeeeecceEEEEEec
Q 002285 657 SGSDRNVLDDNFGEY-NMWLAAENGMFLRLTTGEWMTTMPENLNMDWVDSVKHVFEYFTERTPRSHFEVRETSLVWNYKY 735 (942)
Q Consensus 657 SGR~~~~L~~~~~~~-~l~liaehG~~ir~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~r~~Gs~iE~K~~sl~~hyr~ 735 (942)
|||++..++.|+... ++|++||||+++|.+++ |.+.+ .+++|++.+++++++|++||||+++|.|+++++|||++
T Consensus 541 s~~~r~~l~~~~~~~~~lgl~aEhG~f~r~~~~-w~~~~---~~~~w~~~v~~i~~~~~ert~GS~ie~k~~~l~~hy~~ 616 (732)
T KOG1050|consen 541 SGRGRSVLEKWFFGCKNLGLAAEHGYFVRIPGK-WETCV---LDLDWKDLVKDIFQYYTERTPGSYIERKETALVWHYRN 616 (732)
T ss_pred EccCchhhhhhccccccceeecccCceeccCCc-eeeec---ccccHHHHHHHHHHHHHhcCCCceecccCceEEEeeec
Confidence 999999999998777 89999999999998766 98876 67899999999999999999999999999999999999
Q ss_pred cchHHhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEECCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCH
Q 002285 736 ADLEFGRLQARDILQHLWSGPISNASVDVVQGGRSVEVRAVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDE 815 (942)
Q Consensus 736 ad~e~~~~qa~el~~~L~~~~~~~~~v~v~~G~~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDE 815 (942)
|||+++..||+|+.++| .. .+.++.++.|+..|||+|.|++||.|+.+++..+. .++|+++|+|| |.+||
T Consensus 617 ad~~~g~~qA~el~~~l-~~--~~~~~~v~~g~~~Vev~~~gvsk~~~~~~~~~~~~------~~~df~~c~g~-d~tDe 686 (732)
T KOG1050|consen 617 ADPEFGELQAKELLEHL-ES--KNEPVEVVRGKHIVEVRPQGVSKGLAAERILSEMV------KEPDFVLCIGD-DRTDE 686 (732)
T ss_pred cCcchhHHHHHHHHHHh-cc--cCCCeEEEecCceEEEcccccchHHHHHHHHHhcC------CCcceEEEecC-CCChH
Confidence 99999999999999999 44 67789999999999999999999999999999986 46899999999 99999
Q ss_pred HHHHhcCcCCCCCCCCCCCCcccccccccccccCCccCCCCcccccccccchhhhhhcccccCCCcccccccccccccCC
Q 002285 816 DIYTFFEPELPFESPAGPRANAADHLRRSSISQIPQAKSGPKVRFRKQRSLSSIERKVSNYLTGGIWRPAMRDRMTLNEG 895 (942)
Q Consensus 816 dMF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 895 (942)
+||+++...... +
T Consensus 687 d~~~~~~~~~~~------------------------------------------------------------~------- 699 (732)
T KOG1050|consen 687 DMFEFISKAKDP------------------------------------------------------------E------- 699 (732)
T ss_pred HHHHHHhhccCC------------------------------------------------------------c-------
Confidence 999999763110 0
Q ss_pred CcccccCCCceEEEEeCCCCCccceecCCHHHHHHHHH
Q 002285 896 SSVLDLRGENYFSCTVSRKRSNARYFLGSSGDVVTLLN 933 (942)
Q Consensus 896 ~~~~~~~~~~~~t~~VG~~~s~A~y~l~~~~~V~~~L~ 933 (942)
++ ++.|+|+||.++|.|.|++.++.||..+|+
T Consensus 700 -~~-----~~~F~~~~g~~~t~a~~~~~~~~~v~~~l~ 731 (732)
T KOG1050|consen 700 -KV-----EEIFACTVGQKPSKAKYFLDDTHEVIRLLQ 731 (732)
T ss_pred -cc-----ceEEEEEcCCCCcccccccCChHHHHhhcc
Confidence 00 368999999999999999999999999885
No 6
>PRK10117 trehalose-6-phosphate synthase; Provisional
Probab=100.00 E-value=2.7e-111 Score=962.73 Aligned_cols=451 Identities=35% Similarity=0.644 Sum_probs=416.5
Q ss_pred CeEEEEECCCccceeecCCCcEEEEecCCchHHhhccc-ccCCcEEEEeCCCCCCCchhhHHHHHhh-cCccEEEeecCh
Q 002285 105 QRLLVVANRLPVSAVRRGEDSWQLEISVGGLVSALLGV-REFEARWIGWAGVNVPDEIGQKALTKAL-AEKRCIPVFLDE 182 (942)
Q Consensus 105 ~rlivvsnrlP~~~~~~~~~~~~~~~~~ggL~~~l~~~-~~~~~~WvGw~g~~~~~~~~~~~~~~~l-~~~~~~pV~l~~ 182 (942)
+||||||||+|+... . ..++|||++||.++ +..+|+||||+|....++ ..+.... .++.|.||+|++
T Consensus 2 ~rLivVSNRlp~~~~-----~---~~~~GGL~~aL~~~l~~~~g~WvGW~g~~~~~~---~~~~~~~~~~~~~~~v~L~~ 70 (474)
T PRK10117 2 SRLVVVSNRIAPPDE-----H---KASAGGLAVGILGALKAAGGLWFGWSGETGNED---QPLKKVKKGNITWASFNLSE 70 (474)
T ss_pred CCEEEEECCCcCCCC-----C---CcCCCCcHHHHHHHHHhcCceEEEecCCCCCCc---ccchhhhcCCceEEEecCCH
Confidence 589999999997321 1 45689999999998 778999999999653321 1123332 468999999999
Q ss_pred HHHHHHhhhhhhhcccccccCCCCCcccccccchhhHH-HHHHHHHHHHHHHHHHHhhcCCCCEEEEcCCchhhHHHHHH
Q 002285 183 ETVHQYYNGYCNNMLWPLFHYLGLPQEDRLATTRSFQS-QFDAYKRANQMFAKVVNNIYEEGDVVWCHDYHLMFLPQCLK 261 (942)
Q Consensus 183 ~~~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~~~~~~~-~w~~Y~~vN~~fa~~i~~~~~~~DiIwvHDyhL~llp~~Lr 261 (942)
+++++||+||||++|||+|||+.... .|+. .|++|++||+.||++|++.++++|+||||||||+++|++||
T Consensus 71 ~~~~~yY~gfsn~~LWPlfHy~~~~~--------~~~~~~w~~Y~~VN~~FA~~v~~~~~~~D~VWVHDYhL~llp~~LR 142 (474)
T PRK10117 71 QDYDEYYNQFSNAVLWPAFHYRLDLV--------QFQRPAWEGYLRVNALLADKLLPLLKDDDIIWIHDYHLLPFASELR 142 (474)
T ss_pred HHHHHHHhhhhhcchhhhhCCCCCcc--------CcCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeccHhhHHHHHHH
Confidence 99999999999999999999995432 3554 49999999999999999999999999999999999999999
Q ss_pred hhCCCCeEEEEeccCCCChhHhhcCCchHHHHHHhhhccEEeecCHHHHHHHHHHHHHHhccccCC-CceecCCeeeEEE
Q 002285 262 EYNNNMKVGWFLHTPFPSSEIHRTLPSRTELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTP-EGVEDQGRLTRVA 340 (942)
Q Consensus 262 ~~~p~~~I~~flH~PfP~~e~fr~lp~r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~l~~~~~~-~~i~~~gr~~~v~ 340 (942)
+++|+++||||+|||||++|+|++||+|++|++|||+||+|||||++|++||++||+++++++... ..+.++||.++|.
T Consensus 143 ~~~~~~~IgFFlHiPFPs~eifr~LP~r~eil~glL~aDlIGFqt~~y~rnFl~~~~~~lg~~~~~~~~v~~~gr~v~v~ 222 (474)
T PRK10117 143 KRGVNNRIGFFLHIPFPTPEIFNALPPHDELLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSGKSHTAWGKAFRTE 222 (474)
T ss_pred HhCCCCcEEEEEeCCCCChHHHhhCCChHHHHHHHHhCccceeCCHHHHHHHHHHHHHHcCCcccCCCeEEECCeEEEEE
Confidence 999999999999999999999999999999999999999999999999999999999999987644 3567889999999
Q ss_pred EeeCccCccccchhcCChhhHHHHHHHHHHhcCCceEEEeecccccCCHHHHHHHHHHhHHhCCCCCCcEEEEEEEcCCC
Q 002285 341 AFPIGIDSDRFVRALELPQVQDHINELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPSWRDKVVLIQIAVPTR 420 (942)
Q Consensus 341 viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi~~lL~Af~~ll~~~P~~~~~vvLvqi~~psr 420 (942)
++|+|||++.|...+..+ +.++.++++++++++++|++||||||+|||.++|+||++||++||+|+++++|+||+.|+|
T Consensus 223 ~~PigID~~~~~~~a~~~-~~~~~~~lr~~~~~~~lilgVDRLDytKGi~~rl~Afe~fL~~~Pe~~gkvvlvQia~psR 301 (474)
T PRK10117 223 VYPIGIEPDEIAKQAAGP-LPPKLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSR 301 (474)
T ss_pred EEECeEcHHHHHHHhhch-HHHHHHHHHHHcCCCeEEEEecccccccCHHHHHHHHHHHHHhChhhcCCEEEEEEcCCCC
Confidence 999999999999877655 4667888999999999999999999999999999999999999999999999999999999
Q ss_pred CChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhcc-CCCc
Q 002285 421 TDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQA-SKKG 499 (942)
Q Consensus 421 gd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~-~~~G 499 (942)
+++++|++++++|+++|++||++||+.+|.||+|+++.++++++.++|++|||+++||++||||||++||+|||. +++|
T Consensus 302 ~~v~~Y~~l~~~v~~~vg~INg~fg~~~w~Pv~y~~~~~~~~~l~alyr~ADv~lVTplRDGMNLVAkEyva~q~~~~~G 381 (474)
T PRK10117 302 GDVQAYQDIRHQLETEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPG 381 (474)
T ss_pred CccHHHHHHHHHHHHHHHHHHhccCCCCceeEEEecCCCCHHHHHHHHHhccEEEecccccccccccchheeeecCCCCc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999996 7889
Q ss_pred eEEEeCCCCcccccCCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHHhcCHHHHHHHHHHHHHHhHHH
Q 002285 500 VLILSEFAGAAQSLGAGAILVNPWNITEVASSIGYALNMPADEREKRHLHNFMHVTTHTSQEWAATFVSELNDTIVE 576 (942)
Q Consensus 500 ~lIlSe~~G~~~~lg~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~L~~~~~~ 576 (942)
+||+|||+|++++| .+|++|||||++++|+||.+||+||.+||++|+++++++|.+||+.+|+++||.+|..+...
T Consensus 382 vLILSefAGaA~~L-~~AllVNP~d~~~~A~Ai~~AL~Mp~~Er~~R~~~l~~~v~~~dv~~W~~~fL~~L~~~~~~ 457 (474)
T PRK10117 382 VLVLSQFAGAANEL-TSALIVNPYDRDEVAAALDRALTMPLAERISRHAEMLDVIVKNDINHWQECFISDLKQIVPR 457 (474)
T ss_pred cEEEecccchHHHh-CCCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHhhhc
Confidence 99999999999999 78999999999999999999999999999999999999999999999999999999987533
No 7
>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase. Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.
Probab=100.00 E-value=6.8e-110 Score=961.42 Aligned_cols=454 Identities=31% Similarity=0.602 Sum_probs=420.5
Q ss_pred EECCCccceeecCCCc--EEEEecCCchHHhhccc-c-cCCcEEEEeCCCCCCCchh-hHHHH-HhhcCccEEEeecChH
Q 002285 110 VANRLPVSAVRRGEDS--WQLEISVGGLVSALLGV-R-EFEARWIGWAGVNVPDEIG-QKALT-KALAEKRCIPVFLDEE 183 (942)
Q Consensus 110 vsnrlP~~~~~~~~~~--~~~~~~~ggL~~~l~~~-~-~~~~~WvGw~g~~~~~~~~-~~~~~-~~l~~~~~~pV~l~~~ 183 (942)
||||||+.++++++|. |++++++|||++||.++ + ..+|+||||+|...+++++ ...+. ....+++|.||+|+++
T Consensus 1 vsnRlP~~~~~~~~g~~~~~~~~s~gGL~~al~~~l~~~~~g~Wvgw~g~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~ 80 (487)
T TIGR02398 1 LYHRLPYDEFRGADGKLQRRDPTSPNGIIPTLLSFFGDGRAGTWVAWAEHDENSGETFDSHMTVPAEYKLTAARIPLSKE 80 (487)
T ss_pred CCcCCCceeEECCCCCceEEeccCCCchHHHHHHHhhcccceEEEeeCCCCcccccccccccccccCCceeEEEEeCCHH
Confidence 7999999999876665 77799999999999988 4 4679999999975322111 11111 2235689999999999
Q ss_pred HHHHHhhhhhhhcccccccCCCCCcccccccchhhHH-HHHHHHHHHHHHHHHHHhhcCCCCEEEEcCCchhhHHHHHHh
Q 002285 184 TVHQYYNGYCNNMLWPLFHYLGLPQEDRLATTRSFQS-QFDAYKRANQMFAKVVNNIYEEGDVVWCHDYHLMFLPQCLKE 262 (942)
Q Consensus 184 ~~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~~~~~~~-~w~~Y~~vN~~fa~~i~~~~~~~DiIwvHDyhL~llp~~Lr~ 262 (942)
++++||+||||++|||+|||++... .|++ .|++|++||++||++|++.++++|+||||||||+++|.+||+
T Consensus 81 ~~~~~Y~gf~n~~LWPlfH~~~~~~--------~~~~~~w~~Y~~vN~~FA~~i~~~~~~~d~vWVhDYhL~llp~~LR~ 152 (487)
T TIGR02398 81 QVDIFYHITSKEAFWPILHTFPERF--------QFREDDWQVFLKVNRAFAEAACLEAAEGATVWVHDYNLWLVPGYIRQ 152 (487)
T ss_pred HHHHHHhhhhhccccccccCCcccc--------CcCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEecchhhHHHHHHHH
Confidence 9999999999999999999985433 3665 499999999999999999999999999999999999999999
Q ss_pred hCCCCeEEEEeccCCCChhHhhcCCchHHHHHHhhhccEEeecCHHHHHHHHHHHHHHhccccCCC--------------
Q 002285 263 YNNNMKVGWFLHTPFPSSEIHRTLPSRTELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPE-------------- 328 (942)
Q Consensus 263 ~~p~~~I~~flH~PfP~~e~fr~lp~r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~l~~~~~~~-------------- 328 (942)
++|+++||||+|||||++|+|++||+|++||+|||+||+|||||++|++||++||++++|++....
T Consensus 153 ~~~~~~IgfFlHiPFPs~eifr~LP~r~~ll~glL~aDliGFqt~~y~~~Fl~~~~r~lg~~~~~~~~~~~~~~~~g~~~ 232 (487)
T TIGR02398 153 LRPDLKIAFFHHTPFPSADVFNILPWREQIIGSLLCCDYIGFHIPRYVENFVDAARGLMPLQTVSRQNVDPRFITVGTAL 232 (487)
T ss_pred hCCCCeEEEEeeCCCCChHHHhhCCchHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHhCCccccccccccccccccccc
Confidence 999999999999999999999999999999999999999999999999999999999999875432
Q ss_pred -------ceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHhcCCceEEEeecccccCCHHHHHHHHHHhHH
Q 002285 329 -------GVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFLE 401 (942)
Q Consensus 329 -------~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi~~lL~Af~~ll~ 401 (942)
++.++||.++|.++|+|||++.|.+....+++.++.+++|++++++++|++|||||+.|||+++|+||++||+
T Consensus 233 ~~~~~~~~v~~~gr~v~v~~~PiGID~~~f~~~~~~~~~~~~~~~lr~~~~~~kiIl~VDRLDy~KGI~~kl~Afe~~L~ 312 (487)
T TIGR02398 233 GEERMTTALDTGNRVVKLGAHPVGTDPERIRSALAAASIREMMERIRSELAGVKLILSAERVDYTKGILEKLNAYERLLE 312 (487)
T ss_pred cccccccceeECCEEEEEEEEECEecHHHHHHHhcCchHHHHHHHHHHHcCCceEEEEecccccccCHHHHHHHHHHHHH
Confidence 3778899999999999999999998888888888899999999999999999999999999999999999999
Q ss_pred hCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCC
Q 002285 402 ENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVTSLRD 481 (942)
Q Consensus 402 ~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~pSl~E 481 (942)
+||+|+++++||||+.|+|+++++|++++++++++|++||++|++.+|.||+|+.+.++++++.+||++|||+++||++|
T Consensus 313 ~~Pe~~gkv~Lvqi~~psr~~v~~y~~l~~~v~~~v~~IN~~fg~~~~~pv~~~~~~v~~~el~alYr~ADV~lvT~lrD 392 (487)
T TIGR02398 313 RRPELLGKVTLVTACVPAASGMTIYDELQGQIEQAVGRINGRFARIGWTPLQFFTRSLPYEEVSAWFAMADVMWITPLRD 392 (487)
T ss_pred hCccccCceEEEEEeCCCcccchHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCCHHHHHHHHHhCCEEEECcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCChhHHHHHhhccCCCceEEEeCCCCcccccCCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHHhcCHHH
Q 002285 482 GMNLVSYEFVACQASKKGVLILSEFAGAAQSLGAGAILVNPWNITEVASSIGYALNMPADEREKRHLHNFMHVTTHTSQE 561 (942)
Q Consensus 482 G~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~lg~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~~~~~ 561 (942)
|||||++||||||.+++|+||+|||+|+++++ .+|++|||||++++|+||.+||+||.+||++|+++++++|.+||+.+
T Consensus 393 GmNLVa~Eyva~~~~~~GvLILSefaGaa~~l-~~AllVNP~d~~~~A~ai~~AL~m~~~Er~~R~~~l~~~v~~~d~~~ 471 (487)
T TIGR02398 393 GLNLVAKEYVAAQGLLDGVLVLSEFAGAAVEL-KGALLTNPYDPVRMDETIYVALAMPKAEQQARMREMFDAVNYYDVQR 471 (487)
T ss_pred ccCcchhhHHhhhcCCCCCEEEeccccchhhc-CCCEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHH
Confidence 99999999999999889999999999999999 78999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHH
Q 002285 562 WAATFVSELND 572 (942)
Q Consensus 562 W~~~fl~~L~~ 572 (942)
|+++||.+|..
T Consensus 472 W~~~fl~~l~~ 482 (487)
T TIGR02398 472 WADEFLAAVSP 482 (487)
T ss_pred HHHHHHHHhhh
Confidence 99999998875
No 8
>PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B.
Probab=100.00 E-value=5.9e-110 Score=964.27 Aligned_cols=464 Identities=54% Similarity=0.943 Sum_probs=354.7
Q ss_pred CeEEEEECCCccceeecC-CCc--EEEEecCCchHHhhccc-ccCCcEEEEeCCCCCCCch--hhHHHHHhhcCccEEEe
Q 002285 105 QRLLVVANRLPVSAVRRG-EDS--WQLEISVGGLVSALLGV-REFEARWIGWAGVNVPDEI--GQKALTKALAEKRCIPV 178 (942)
Q Consensus 105 ~rlivvsnrlP~~~~~~~-~~~--~~~~~~~ggL~~~l~~~-~~~~~~WvGw~g~~~~~~~--~~~~~~~~l~~~~~~pV 178 (942)
.|+||||||||+.+++++ +|+ |+++.++|||+++|.++ +..+++||||+|...++++ ++........+++|+||
T Consensus 1 ~~livVsnrlPv~~~r~~~~G~~~~~~~~~~ggL~~al~~l~~~~~~~WvGw~g~~~~~~~~~~~~v~~~~~~~~~~~pV 80 (474)
T PF00982_consen 1 ARLIVVSNRLPVSVKRDPDDGSWGWSWKPSAGGLVSALDPLLKKRGGIWVGWPGVDVDEEEDEQDRVEPRLLDEYNCVPV 80 (474)
T ss_dssp --------------------------GGGGS-HHHHHHHHHHHHH-EEEEEEEEEES-TTS---EEEE---ETTEEEEEE
T ss_pred CCcccccccccccccccccccccccccccCCCcHHHHHHHHHhcCCCEEEEeCCCcCccccccccchhhhcccCceEEEE
Confidence 379999999999998876 666 88888899999999999 7789999999998776544 22222345678999999
Q ss_pred ecChHHHHHHhhhhhhhcccccccCCCCCcccccccchhhHH-HHHHHHHHHHHHHHHHHhhcCCCCEEEEcCCchhhHH
Q 002285 179 FLDEETVHQYYNGYCNNMLWPLFHYLGLPQEDRLATTRSFQS-QFDAYKRANQMFAKVVNNIYEEGDVVWCHDYHLMFLP 257 (942)
Q Consensus 179 ~l~~~~~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~~~~~~~-~w~~Y~~vN~~fa~~i~~~~~~~DiIwvHDyhL~llp 257 (942)
||+++++++||+||||++|||+|||....... ...|+. .|++|++||+.||++|++.+++||+|||||||||++|
T Consensus 81 ~l~~~~~~~~Y~gf~n~~LWPlfHy~~~~~~~----~~~~~~~~w~~Y~~vN~~FA~~i~~~~~~~D~VWVhDYhL~llP 156 (474)
T PF00982_consen 81 FLSPEEYDGYYNGFCNQVLWPLFHYRLDSRPD----LARFEEEWWEAYKRVNRRFADAIAEVYRPGDLVWVHDYHLMLLP 156 (474)
T ss_dssp EE-HHHHHHHTTTHHHHTHHHHHTT-GG--------G----HHHHHHHHHHHHHHHHHHGGG--TT-EEEEESGGGTTHH
T ss_pred EcCHHHHHHHHHhhhhhccCcccccccccccc----cchhhHHHHHHHHHHHHHHHHHHHHhCcCCCEEEEeCCcHHHHH
Confidence 99999999999999999999999998421101 123555 4999999999999999999999999999999999999
Q ss_pred HHHHhhCCCCeEEEEeccCCCChhHhhcCCchHHHHHHhhhccEEeecCHHHHHHHHHHHHHHhccccCCC--ceecCCe
Q 002285 258 QCLKEYNNNMKVGWFLHTPFPSSEIHRTLPSRTELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPE--GVEDQGR 335 (942)
Q Consensus 258 ~~Lr~~~p~~~I~~flH~PfP~~e~fr~lp~r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~l~~~~~~~--~i~~~gr 335 (942)
++||+++|+++||||+|||||++|+|++||+|++||+|||+||+|||||++|++||++||+++++++.... ++.++||
T Consensus 157 ~~LR~~~~~~~IgfFlHiPFPs~e~fr~lP~r~eiL~glL~aDlIgFqt~~~~~nFl~~~~r~lg~~~~~~~~~v~~~Gr 236 (474)
T PF00982_consen 157 QMLRERGPDARIGFFLHIPFPSSEIFRCLPWREEILRGLLGADLIGFQTFEYARNFLSCCKRLLGLEVDSDRGTVEYNGR 236 (474)
T ss_dssp HHHHHTT--SEEEEEE-S----HHHHTTSTTHHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHS-EEEEETTE-EEETTE
T ss_pred HHHHhhcCCceEeeEEecCCCCHHHHhhCCcHHHHHHHhhcCCEEEEecHHHHHHHHHHHHHHcCCcccCCCceEEECCE
Confidence 99999999999999999999999999999999999999999999999999999999999999999887654 7999999
Q ss_pred eeEEEEeeCccCccccchhcCChhhHHHHHHHHHHhcC-CceEEEeecccccCCHHHHHHHHHHhHHhCCCCCCcEEEEE
Q 002285 336 LTRVAAFPIGIDSDRFVRALELPQVQDHINELKERFAG-RKVMLGVDRLDMIKGIPQKILAFEKFLEENPSWRDKVVLIQ 414 (942)
Q Consensus 336 ~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~-~~iIl~VgRLd~~KGi~~lL~Af~~ll~~~P~~~~~vvLvq 414 (942)
.++|.++|+|||++.|.+.+.++++.++.+++++++++ +++|++|||+|++||+.++|+||++||++||+|+++++|+|
T Consensus 237 ~v~v~~~pigId~~~~~~~~~~~~v~~~~~~l~~~~~~~~~ii~gvDrld~~kGi~~kl~Afe~fL~~~P~~~~kv~liQ 316 (474)
T PF00982_consen 237 RVRVGVFPIGIDPDAFAQLARSPEVQERAEELREKFKGKRKIIVGVDRLDYTKGIPEKLRAFERFLERYPEYRGKVVLIQ 316 (474)
T ss_dssp EEEEEE------HHHHHHHHH-S---HHHHHHHHHTTT-SEEEEEE--B-GGG-HHHHHHHHHHHHHH-GGGTTTEEEEE
T ss_pred EEEEEEeeccCChHHHHhhccChHHHHHHHHHHHhcCCCcEEEEEeccchhhcCHHHHHHHHHHHHHhCcCccCcEEEEE
Confidence 99999999999999999988888999999999999988 59999999999999999999999999999999999999999
Q ss_pred EEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhc
Q 002285 415 IAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQ 494 (942)
Q Consensus 415 i~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~ 494 (942)
|+.|+++++++|++++++++++|++||++||+.+|.||+|+.+.++++++.+||++|||+++||++||||||++||+|||
T Consensus 317 i~~psr~~~~~y~~~~~~v~~~v~~IN~~~g~~~~~PI~~~~~~~~~~~~~aly~~aDv~lvTslrDGmNLva~Eyva~q 396 (474)
T PF00982_consen 317 IAVPSREDVPEYQELRREVEELVGRINGKYGTPDWTPIIYIYRSLSFEELLALYRAADVALVTSLRDGMNLVAKEYVACQ 396 (474)
T ss_dssp E--B-STTSHHHHHHHHHHHHHHHHHHHHH-BTTB-SEEEE-S---HHHHHHHHHH-SEEEE--SSBS--HHHHHHHHHS
T ss_pred EeeccCccchhHHHHHHHHHHHHHHHHhhcccCCceeEEEEecCCCHHHHHHHHHhhhhEEecchhhccCCcceEEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCceEEEeCCCCcccccCCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHHhcCHHHHHHHHHHHHHH
Q 002285 495 ASKKGVLILSEFAGAAQSLGAGAILVNPWNITEVASSIGYALNMPADEREKRHLHNFMHVTTHTSQEWAATFVSELND 572 (942)
Q Consensus 495 ~~~~G~lIlSe~~G~~~~lg~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~L~~ 572 (942)
.+++|+||+|||+|++++|+.++++|||||++++|+||.+||+|+++||+.|+++++++|.+||+.+|+++||.+|++
T Consensus 397 ~~~~GvLiLSefaGaa~~L~~~al~VNP~d~~~~A~ai~~AL~M~~~Er~~r~~~~~~~v~~~~~~~W~~~~l~~L~~ 474 (474)
T PF00982_consen 397 DDNPGVLILSEFAGAAEQLSEAALLVNPWDIEEVADAIHEALTMPPEERKERHARLREYVREHDVQWWAESFLRDLKR 474 (474)
T ss_dssp -TS--EEEEETTBGGGGT-TTS-EEE-TT-HHHHHHHHHHHHT--HHHHHHHHHHHHHHHHHT-HHHHHHHHHHHHHT
T ss_pred cCCCCceEeeccCCHHHHcCCccEEECCCChHHHHHHHHHHHcCCHHHHHHHHHHHHHHhHhCCHHHHHHHHHHHhhC
Confidence 989999999999999999955779999999999999999999999999999999999999999999999999999873
No 9
>COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.6e-105 Score=909.47 Aligned_cols=461 Identities=49% Similarity=0.862 Sum_probs=428.4
Q ss_pred CCCeEEEEECCCccceee-cCCCcEEEEecCCchHHhhccc-ccCCcEEEEeCCCCCCCchhhHHHHHhhcCccEEEeec
Q 002285 103 CKQRLLVVANRLPVSAVR-RGEDSWQLEISVGGLVSALLGV-REFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFL 180 (942)
Q Consensus 103 ~~~rlivvsnrlP~~~~~-~~~~~~~~~~~~ggL~~~l~~~-~~~~~~WvGw~g~~~~~~~~~~~~~~~l~~~~~~pV~l 180 (942)
..+|+||||||+|+...+ .+++......++|||+++|.++ +..+++||||+|...+.++..........++...||++
T Consensus 13 ~~~r~ivvsnR~p~~~~~~~~~~~~~~~~s~ggL~~~l~~~~~~~~~~W~gw~G~~~~~~~~~~~~~~~~~~~~~~~v~l 92 (486)
T COG0380 13 EDSRLIVVSNRLPVKKTPEGDKGIEFGKRSAGGLVTALKPLLRVDGGTWIGWSGTTGPTDESSDDLKERIGEFTSAPVIL 92 (486)
T ss_pred cCCcEEEEEccCCCcccccCCCcceeeccCCcchhhhcchhhHhhcceEEecCceeccccccchhhhhccccceEEEEec
Confidence 468999999999999763 3456788899999999999998 77899999999988763232344555556899999999
Q ss_pred ChHHHHHHhhhhhhhcccccccCCCCCcccccccchhhHH-HHHHHHHHHHHHHHHHHhhcCCCCEEEEcCCchhhHHHH
Q 002285 181 DEETVHQYYNGYCNNMLWPLFHYLGLPQEDRLATTRSFQS-QFDAYKRANQMFAKVVNNIYEEGDVVWCHDYHLMFLPQC 259 (942)
Q Consensus 181 ~~~~~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~~~~~~~-~w~~Y~~vN~~fa~~i~~~~~~~DiIwvHDyhL~llp~~ 259 (942)
+.+++++||++|||++|||+|||+.... .|++ .|+.|++||++||++|++.+++||+||||||||+++|+|
T Consensus 93 ~~~~~~~~Y~~fsn~iLWP~~Hy~~~~~--------~~~~~~w~~Y~~vN~~FAd~i~~~~~~gDiIWVhDYhL~L~P~m 164 (486)
T COG0380 93 SDEDYEGYYNGFSNAILWPLFHYFIDDV--------AYERNWWDAYVKVNRKFADKIVEIYEPGDIIWVHDYHLLLVPQM 164 (486)
T ss_pred CHHHHHHHHHHhhHhhhcceeeeecCcc--------ccchHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEechhhhhHHH
Confidence 9999999999999999999999995332 3555 499999999999999999999999999999999999999
Q ss_pred HHhhCCCCeEEEEeccCCCChhHhhcCCchHHHHHHhhhccEEeecCHHHHHHHHHHHHHHhccccCCCcee---cCCee
Q 002285 260 LKEYNNNMKVGWFLHTPFPSSEIHRTLPSRTELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVE---DQGRL 336 (942)
Q Consensus 260 Lr~~~p~~~I~~flH~PfP~~e~fr~lp~r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~l~~~~~~~~i~---~~gr~ 336 (942)
||++.|+++||||+|+|||++|+|+|||+|++|++||++||+|||||++|++||+.+|+++++... ..++. +.|+.
T Consensus 165 lR~~~~~~~IgfFlHiPfPssEvfr~lP~r~eIl~gll~~dligFqt~~y~~nF~~~~~r~~~~~~-~~~~~~~~~~~~~ 243 (486)
T COG0380 165 LRERIPDAKIGFFLHIPFPSSEVFRCLPWREEILEGLLGADLIGFQTESYARNFLDLCSRLLGVTG-DADIRFNGADGRI 243 (486)
T ss_pred HHHhCCCceEEEEEeCCCCCHHHHhhCchHHHHHHHhhcCCeeEecCHHHHHHHHHHHHHhccccc-cccccccccCCce
Confidence 999999999999999999999999999999999999999999999999999999999999998652 22333 34799
Q ss_pred eEEEEeeCccCccccchhcCChhhHHHHHHHHHHhcC-CceEEEeecccccCCHHHHHHHHHHhHHhCCCCCCcEEEEEE
Q 002285 337 TRVAAFPIGIDSDRFVRALELPQVQDHINELKERFAG-RKVMLGVDRLDMIKGIPQKILAFEKFLEENPSWRDKVVLIQI 415 (942)
Q Consensus 337 ~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~-~~iIl~VgRLd~~KGi~~lL~Af~~ll~~~P~~~~~vvLvqi 415 (942)
+++.++|+|||+..|.....++.++.+..++++.+.+ +++|++|||||+.||+.++++||++||++||+|++|++|+||
T Consensus 244 v~v~a~PIgID~~~~~~~~~~~~v~~~~~el~~~~~~~~kiivgvDRlDy~kGi~~rl~Afe~lL~~~Pe~~~kvvliQi 323 (486)
T COG0380 244 VKVGAFPIGIDPEEFERALKSPSVQEKVLELKAELGRNKKLIVGVDRLDYSKGIPQRLLAFERLLEEYPEWRGKVVLLQI 323 (486)
T ss_pred EEEEEEeeecCHHHHHHhhcCCchhhHHHHHHHHhcCCceEEEEehhcccccCcHHHHHHHHHHHHhChhhhCceEEEEe
Confidence 9999999999999999998888888888899988876 999999999999999999999999999999999999999999
Q ss_pred EcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhcc
Q 002285 416 AVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQA 495 (942)
Q Consensus 416 ~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~ 495 (942)
+.|+|++.++|+.++.+++++|++||++||+.+|.||+|++..++++++.+||++|||+++||++||||||++||+|||.
T Consensus 324 ~~pSr~~v~~y~~~~~~i~~~V~rIN~~fG~~~~~Pv~~l~~~~~~~~l~al~~~aDv~lVtplrDGMNLvakEyVa~q~ 403 (486)
T COG0380 324 APPSREDVEEYQALRLQIEELVGRINGEFGSLSWTPVHYLHRDLDRNELLALYRAADVMLVTPLRDGMNLVAKEYVAAQR 403 (486)
T ss_pred cCCCccccHHHHHHHHHHHHHHHHHHhhcCCCCcceeEEEeccCCHHHHHHHHhhhceeeeccccccccHHHHHHHHhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCceEEEeCCCCcccccCCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHHhcCHHHHHHHHHHHHHHh
Q 002285 496 SKKGVLILSEFAGAAQSLGAGAILVNPWNITEVASSIGYALNMPADEREKRHLHNFMHVTTHTSQEWAATFVSELNDT 573 (942)
Q Consensus 496 ~~~G~lIlSe~~G~~~~lg~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~L~~~ 573 (942)
+++|++|+|||+|++.+| .++++|||||.+++|++|.+||+|+++||++|++++++.|.+||+++|+++|+.+|...
T Consensus 404 ~~~G~LiLSeFaGaa~~L-~~AliVNP~d~~~va~ai~~AL~m~~eEr~~r~~~~~~~v~~~d~~~W~~~fl~~la~~ 480 (486)
T COG0380 404 DKPGVLILSEFAGAASEL-RDALIVNPWDTKEVADAIKRALTMSLEERKERHEKLLKQVLTHDVARWANSFLDDLAQA 480 (486)
T ss_pred CCCCcEEEeccccchhhh-ccCEeECCCChHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhc
Confidence 889999999999999999 77999999999999999999999999999999999999999999999999999999863
No 10
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=100.00 E-value=5.8e-102 Score=900.42 Aligned_cols=452 Identities=56% Similarity=0.935 Sum_probs=420.7
Q ss_pred eEEEEECCCccceeecCCCcEEEEecCCchHHhhccc-ccCCcEEEEeCCCCCCCchhhHHH-HHhhcCccEEEeecChH
Q 002285 106 RLLVVANRLPVSAVRRGEDSWQLEISVGGLVSALLGV-REFEARWIGWAGVNVPDEIGQKAL-TKALAEKRCIPVFLDEE 183 (942)
Q Consensus 106 rlivvsnrlP~~~~~~~~~~~~~~~~~ggL~~~l~~~-~~~~~~WvGw~g~~~~~~~~~~~~-~~~l~~~~~~pV~l~~~ 183 (942)
||||||||+|+.+.++ + +..++|||++||.++ +..+++||||+|...++++++..+ .....+++|+||||+++
T Consensus 1 ~livvsnr~p~~~~~~--~---~~~~~gGl~~al~~~~~~~~~~Wvgw~g~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~ 75 (456)
T TIGR02400 1 RLIVVSNRLPVPITRG--G---LEPSAGGLAVALLGALKATGGVWFGWSGKTVEEDEGEPFLRTELEGKITLAPVFLSEE 75 (456)
T ss_pred CEEEEECCCCccccCC--C---CCcCCCCHHHHHHHHHhccCcEEEEeCCCCCCccchhhhHHHhhccCceEEEEECCHH
Confidence 6999999999987654 2 567899999999998 778999999999866543322223 34456799999999999
Q ss_pred HHHHHhhhhhhhcccccccCCCCCcccccccchhhHH-HHHHHHHHHHHHHHHHHhhcCCCCEEEEcCCchhhHHHHHHh
Q 002285 184 TVHQYYNGYCNNMLWPLFHYLGLPQEDRLATTRSFQS-QFDAYKRANQMFAKVVNNIYEEGDVVWCHDYHLMFLPQCLKE 262 (942)
Q Consensus 184 ~~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~~~~~~~-~w~~Y~~vN~~fa~~i~~~~~~~DiIwvHDyhL~llp~~Lr~ 262 (942)
++++||+||||++|||+|||++... .|++ .|++|++||+.||++|++.++++|+||||||||+++|.+||+
T Consensus 76 ~~~~~y~gf~n~~lWPl~H~~~~~~--------~~~~~~w~~Y~~vN~~fA~~i~~~~~~~d~vwvhDYhl~l~p~~lr~ 147 (456)
T TIGR02400 76 DVDGYYNGFSNSTLWPLFHYRPDLI--------RYDRKAWEAYRRVNRLFAEALAPLLQPGDIVWVHDYHLMLLPAMLRE 147 (456)
T ss_pred HHHHHHHHhhhhhcchhhccccccc--------ccCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEecchhhHHHHHHHh
Confidence 9999999999999999999995432 3655 499999999999999999999999999999999999999999
Q ss_pred hCCCCeEEEEeccCCCChhHhhcCCchHHHHHHhhhccEEeecCHHHHHHHHHHHHHHhccccCCCceecCCeeeEEEEe
Q 002285 263 YNNNMKVGWFLHTPFPSSEIHRTLPSRTELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGRLTRVAAF 342 (942)
Q Consensus 263 ~~p~~~I~~flH~PfP~~e~fr~lp~r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~l~~~~~~~~i~~~gr~~~v~vi 342 (942)
+.|+++||||+|||||++|+|++||+|++|++|||+||+|||||++|++||+++|+++++++....++.+.|+.++|.++
T Consensus 148 ~~~~~~igfFlHipfP~~e~f~~lp~r~~il~gll~~dligF~t~~~~~~Fl~~~~~~l~~~~~~~~~~~~g~~~~v~vi 227 (456)
T TIGR02400 148 LGVQNKIGFFLHIPFPSSEIYRTLPWRRELLEGLLAYDLVGFQTYDDARNFLSAVSRELGLETLPNGVESGGRTVRVGAF 227 (456)
T ss_pred hCCCCeEEEEEeCCCCChHHHhhCCcHHHHHHHHhcCCEEEECCHHHHHHHHHHHHHHhCCcccCCceEECCcEEEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999998888888899999999999
Q ss_pred eCccCccccchhcCChhhHHHHHHHHHHhcCCceEEEeecccccCCHHHHHHHHHHhHHhCCCCCCcEEEEEEEcCCCCC
Q 002285 343 PIGIDSDRFVRALELPQVQDHINELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPSWRDKVVLIQIAVPTRTD 422 (942)
Q Consensus 343 P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi~~lL~Af~~ll~~~P~~~~~vvLvqi~~psrgd 422 (942)
|+|||++.|.+....+++.+....+|++++++++|++||||++.||+..+|+||++|++++|+++++++|+||++|++++
T Consensus 228 P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl~VgRLd~~KGi~~ll~A~~~ll~~~p~~~~~v~Lv~v~~p~rg~ 307 (456)
T TIGR02400 228 PIGIDVDRFAEQAKKPSVQKRIAELRESLKGRKLIIGVDRLDYSKGLPERLLAFERFLEEHPEWRGKVVLVQIAVPSRGD 307 (456)
T ss_pred cCcCCHHHHHHHhcChhHHHHHHHHHHHcCCCeEEEEccccccccCHHHHHHHHHHHHHhCccccCceEEEEEecCCccC
Confidence 99999999998877777777888899999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhccCCCceEE
Q 002285 423 VPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLI 502 (942)
Q Consensus 423 ~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~lI 502 (942)
+++|+++++++++++++||++|+..+|.||+|+.+.++++++.++|++|||||+||++||||||++|||||+..+.|+||
T Consensus 308 ~~~~~~l~~~i~~lv~~in~~~~~~~~~pv~~l~~~~~~~el~aly~aaDv~vv~S~~EG~~Lv~lEamA~g~P~~g~vV 387 (456)
T TIGR02400 308 VPEYQQLRRQVEELVGRINGRFGTLDWTPIRYLNRSYDREELMALYRAADVGLVTPLRDGMNLVAKEYVAAQDPKDGVLI 387 (456)
T ss_pred chHHHHHHHHHHHHHHHHHhccCCCCCccEEEEcCCCCHHHHHHHHHhCcEEEECccccccCccHHHHHHhcCCCCceEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999876668899
Q ss_pred EeCCCCcccccCCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHHhcCHHHHHHHHHHHHH
Q 002285 503 LSEFAGAAQSLGAGAILVNPWNITEVASSIGYALNMPADEREKRHLHNFMHVTTHTSQEWAATFVSELN 571 (942)
Q Consensus 503 lSe~~G~~~~lg~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~L~ 571 (942)
+|+++|+++++ .+|++|||+|++++|+||.++|+|+++||++|+++++++|.+||+.+|+++|+.+|.
T Consensus 388 lS~~~G~~~~l-~~gllVnP~d~~~lA~aI~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 455 (456)
T TIGR02400 388 LSEFAGAAQEL-NGALLVNPYDIDGMADAIARALTMPLEEREERHRAMMDKLRKNDVQRWREDFLSDLN 455 (456)
T ss_pred EeCCCCChHHh-CCcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHhh
Confidence 99999999999 599999999999999999999999999999999999999999999999999999875
No 11
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=100.00 E-value=4.6e-93 Score=830.99 Aligned_cols=456 Identities=54% Similarity=0.924 Sum_probs=424.0
Q ss_pred eEEEEECCCccceeecCCCcEEEEecCCchHHhhccc-ccCCcEEEEeCCCCCCCchhhHHHHHhhcCccEEEeecChHH
Q 002285 106 RLLVVANRLPVSAVRRGEDSWQLEISVGGLVSALLGV-REFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDEET 184 (942)
Q Consensus 106 rlivvsnrlP~~~~~~~~~~~~~~~~~ggL~~~l~~~-~~~~~~WvGw~g~~~~~~~~~~~~~~~l~~~~~~pV~l~~~~ 184 (942)
||||||||+|+.++++++|.|+++.++|||+++|.++ +..+++||||+|...+.+++.......+.+|+|+|||+++++
T Consensus 1 ~li~vsnr~p~~~~~~~~~~~~~~~~~ggl~~~l~~~~~~~~~~wvg~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~ 80 (460)
T cd03788 1 RLVVVSNRLPVSIERDGDGEFEARRSAGGLATALKGLLKRTGGLWVGWSGIEEDEEEEDEVSTELLGEYTVAPVFLSPEE 80 (460)
T ss_pred CEEEEECCCCceeEEcCCCceEeccCCCcHHHHHHHHHhcCCeEEEEeCCCCCCcccchhhhhhhcCCceEEEeeCCHHH
Confidence 6999999999999998888999999999999999998 777999999999877665444455666789999999999999
Q ss_pred HHHHhhhhhhhcccccccCCCCCcccccccchhhHH-HHHHHHHHHHHHHHHHHhhcCCCCEEEEcCCchhhHHHHHHhh
Q 002285 185 VHQYYNGYCNNMLWPLFHYLGLPQEDRLATTRSFQS-QFDAYKRANQMFAKVVNNIYEEGDVVWCHDYHLMFLPQCLKEY 263 (942)
Q Consensus 185 ~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~~~~~~~-~w~~Y~~vN~~fa~~i~~~~~~~DiIwvHDyhL~llp~~Lr~~ 263 (942)
++.||+||||++|||+|||++... .|++ .|++|+++|+.||++|.+.++++|+||||||||+++|.+||++
T Consensus 81 ~~~~y~~f~~~~LWp~~H~~~~~~--------~~~~~~w~~Y~~vN~~fa~~i~~~~~~~d~iwihDyhl~llp~~lr~~ 152 (460)
T cd03788 81 FEGYYNGFSNEVLWPLFHYRLDLA--------RFDREDWEAYVRVNRKFADAIAEVLRPGDLVWVHDYHLLLLPQMLRER 152 (460)
T ss_pred HHHHHHHhhhhhcchhhcCCCCcc--------ccCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeChhhhHHHHHHHhh
Confidence 999999999999999999985432 3554 5999999999999999999999999999999999999999999
Q ss_pred CCCCeEEEEeccCCCChhHhhcCCchHHHHHHhhhccEEeecCHHHHHHHHHHHHHHhccccCC-CceecCCeeeEEEEe
Q 002285 264 NNNMKVGWFLHTPFPSSEIHRTLPSRTELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTP-EGVEDQGRLTRVAAF 342 (942)
Q Consensus 264 ~p~~~I~~flH~PfP~~e~fr~lp~r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~l~~~~~~-~~i~~~gr~~~v~vi 342 (942)
.|+++||||+|||||++++|+++|++++|+++|++||+||||+++|+++|+++|+++++++... ..+.++|+.++|.++
T Consensus 153 ~~~~~i~~f~HipfP~~e~~~~lp~~~~ll~~~l~~D~igF~t~~~~~~Fl~~~~~~l~~~~~~~~~i~~~g~~~~i~vi 232 (460)
T cd03788 153 GPDARIGFFLHIPFPSSEIFRCLPWREELLRGLLGADLIGFQTERYARNFLSCCSRLLGLEVTDDGGVEYGGRRVRVGAF 232 (460)
T ss_pred CCCCeEEEEEeCCCCChHHHhhCCChHHHHHHHhcCCEEEECCHHHHHHHHHHHHHHcCCcccCCceEEECCEEEEEEEE
Confidence 9999999999999999999999999999999999999999999999999999999999988654 578899999999999
Q ss_pred eCccCccccchhcCChhhHHHHHHHHHHhcCCceEEEeecccccCCHHHHHHHHHHhHHhCCCCCCcEEEEEEEcCCCCC
Q 002285 343 PIGIDSDRFVRALELPQVQDHINELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPSWRDKVVLIQIAVPTRTD 422 (942)
Q Consensus 343 P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi~~lL~Af~~ll~~~P~~~~~vvLvqi~~psrgd 422 (942)
|+|||++.|.+....++..++..+++..++++++|++||||++.||+..+|+||+++++++|+++++++|+||+.|++++
T Consensus 233 p~GID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~il~vgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vg~~~~g~ 312 (460)
T cd03788 233 PIGIDPDAFRKLAASPEVQERAAELRERLGGRKLIVGVDRLDYSKGIPERLLAFERLLERYPEWRGKVVLVQIAVPSRTD 312 (460)
T ss_pred eCeEcHHHHHHHhcCchhHHHHHHHHHhcCCCEEEEEecCccccCCHHHHHHHHHHHHHhChhhcCCEEEEEEccCCCcC
Confidence 99999999988766666656666667677889999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhccCCCceEE
Q 002285 423 VPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLI 502 (942)
Q Consensus 423 ~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~lI 502 (942)
++++.++++++++++++||.+++..+|.||+|+.+.++.+++.++|++|||||+||++||||||++|||||+..++|+||
T Consensus 313 ~~~~~~l~~~l~~~v~~in~~~g~~~~~~v~~~~g~v~~~el~~~y~~aDv~v~pS~~Eg~~lv~lEAma~g~p~~g~vV 392 (460)
T cd03788 313 VPEYQELRREVEELVGRINGKFGTLDWTPVRYLYRSLPREELAALYRAADVALVTPLRDGMNLVAKEYVACQDDDPGVLI 392 (460)
T ss_pred cHHHHHHHHHHHHHHHHHHhccCCCCceeEEEEeCCCCHHHHHHHHHhccEEEeCccccccCcccceeEEEecCCCceEE
Confidence 99999999999999999999999888999999999999999999999999999999999999999999999877778899
Q ss_pred EeCCCCcccccCCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHHhcCHHHHHHHHHHHH
Q 002285 503 LSEFAGAAQSLGAGAILVNPWNITEVASSIGYALNMPADEREKRHLHNFMHVTTHTSQEWAATFVSEL 570 (942)
Q Consensus 503 lSe~~G~~~~lg~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~L 570 (942)
+|+++|+++.+ .+|++|||+|++++|++|.++|+|++++|+.+++++++++.+||+..|+++|+.+|
T Consensus 393 ~S~~~G~~~~~-~~g~lv~p~d~~~la~ai~~~l~~~~~e~~~~~~~~~~~v~~~~~~~w~~~~l~~l 459 (460)
T cd03788 393 LSEFAGAAEEL-SGALLVNPYDIDEVADAIHRALTMPLEERRERHRKLREYVRTHDVQAWANSFLDDL 459 (460)
T ss_pred Eeccccchhhc-CCCEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHhh
Confidence 99999999884 89999999999999999999999999999999999999999999999999999887
No 12
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2e-40 Score=354.56 Aligned_cols=251 Identities=27% Similarity=0.411 Sum_probs=216.9
Q ss_pred CChhhhhhhhcccCCEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHh
Q 002285 588 LPIKGAVDSYLQSNNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDN 667 (942)
Q Consensus 588 l~~~~~~~~y~~s~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~ 667 (942)
+....+.+.|..+++++|||||||||++++.+| ..+.++++++++|++|+++++|.|+|+|||+..+++.+
T Consensus 4 ~~~~~~~~~~~~a~~~~~~lDyDGTl~~i~~~p---------~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~ 74 (266)
T COG1877 4 LQSNQLLEPYLNARKRLLFLDYDGTLTEIVPHP---------EAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERL 74 (266)
T ss_pred hhhhhhccccccccceEEEEeccccccccccCc---------cccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHh
Confidence 445667889999999999999999999999999 68899999999999999999999999999999999999
Q ss_pred hcccCceEEeecceEEEeCCCceeecccCCCChhHHHHHHHHHHHHHhcCCCeeeeeecceEEEEEeccchHHhHHHHHH
Q 002285 668 FGEYNMWLAAENGMFLRLTTGEWMTTMPENLNMDWVDSVKHVFEYFTERTPRSHFEVRETSLVWNYKYADLEFGRLQARD 747 (942)
Q Consensus 668 ~~~~~l~liaehG~~ir~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~r~~Gs~iE~K~~sl~~hyr~ad~e~~~~qa~e 747 (942)
++..+++++|+||++++..++.|.....+..++.|++.+.++++++++++||++||.|+++++||||+++++....++..
T Consensus 75 ~~v~~i~l~aehGa~~r~~~g~~~~~~~~~~~~~~~~~v~~~l~~~v~r~pGs~iE~K~~a~~~Hyr~a~~~~~~~~a~~ 154 (266)
T COG1877 75 FGVPGIGLIAEHGAEVRDPNGKWWINLAEEADLRWLKEVAAILEYYVERTPGSYIERKGFAVALHYRNAEDDEGAALALA 154 (266)
T ss_pred cCCCCccEEEecceEEecCCCCeeEecCHHHHhhHHHHHHHHHHHHhhcCCCeEEEEcCcEEEEeeccCCchhhHHHHHH
Confidence 99769999999999998655555333324567789999999999999999999999999999999999987766555444
Q ss_pred HHHHHhcCCCCCCCeEEEEcCcEEEEEECCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCcCCCC
Q 002285 748 ILQHLWSGPISNASVDVVQGGRSVEVRAVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEPELPF 827 (942)
Q Consensus 748 l~~~L~~~~~~~~~v~v~~G~~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~~~~~ 827 (942)
..... . ....+++..||++||++|.++|||.|+++++++.+++ .++++|+|| |.|||+||++++..
T Consensus 155 ~~~~~-~---~~~~~~v~~gk~vVEvrp~~~~KG~a~~~i~~~~~~~------~~~~~~aGD-D~TDE~~F~~v~~~--- 220 (266)
T COG1877 155 EAATL-I---NELKLRVTPGKMVVELRPPGVSKGAAIKYIMDELPFD------GRFPIFAGD-DLTDEDAFAAVNKL--- 220 (266)
T ss_pred HHHhc-c---ccccEEEEeCceEEEEeeCCcchHHHHHHHHhcCCCC------CCcceecCC-CCccHHHHHhhccC---
Confidence 33322 1 1112899999999999999999999999999998743 268999999 99999999999752
Q ss_pred CCCCCCCCcccccccccccccCCccCCCCcccccccccchhhhhhcccccCCCcccccccccccccCCCcccccCCCceE
Q 002285 828 ESPAGPRANAADHLRRSSISQIPQAKSGPKVRFRKQRSLSSIERKVSNYLTGGIWRPAMRDRMTLNEGSSVLDLRGENYF 907 (942)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (942)
..+
T Consensus 221 -----------------------------------------------------------------------------~~~ 223 (266)
T COG1877 221 -----------------------------------------------------------------------------DSI 223 (266)
T ss_pred -----------------------------------------------------------------------------CCc
Confidence 258
Q ss_pred EEEeCCCCCccceecCCHHHHHHHHHHhhhC
Q 002285 908 SCTVSRKRSNARYFLGSSGDVVTLLNELAEC 938 (942)
Q Consensus 908 t~~VG~~~s~A~y~l~~~~~V~~~L~~L~~~ 938 (942)
+|+||.+.|+|.|++.++..+..+|..+.+.
T Consensus 224 ~v~v~~~~t~a~~~~~~~~~~~~~l~~~~~~ 254 (266)
T COG1877 224 TVKVGVGSTQAKFRLAGVYGFLRSLYKLLEA 254 (266)
T ss_pred eEEecCCcccccccccccHHHHHHHHHHHHH
Confidence 9999999999999999999999999988654
No 13
>PLN02151 trehalose-phosphatase
Probab=100.00 E-value=2.1e-40 Score=366.48 Aligned_cols=242 Identities=17% Similarity=0.303 Sum_probs=196.5
Q ss_pred hcccCCEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccCceEE
Q 002285 597 YLQSNNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYNMWLA 676 (942)
Q Consensus 597 y~~s~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l~li 676 (942)
..++++.+|||||||||+|++++| +.+.++++++++|++|++ +..|+|+|||++..|+++++..+++++
T Consensus 93 ~~~~~~~ll~lDyDGTL~PIv~~P---------~~A~~~~~~~~aL~~La~--~~~vaIvSGR~~~~l~~~~~~~~l~la 161 (354)
T PLN02151 93 KSEGKQIVMFLDYDGTLSPIVDDP---------DRAFMSKKMRNTVRKLAK--CFPTAIVSGRCREKVSSFVKLTELYYA 161 (354)
T ss_pred hhcCCceEEEEecCccCCCCCCCc---------ccccCCHHHHHHHHHHhc--CCCEEEEECCCHHHHHHHcCCccceEE
Confidence 356678999999999999999999 678999999999999996 469999999999999999997799999
Q ss_pred eecceEEEeCC--Cceee----cccCCCChhHHHHHHHHHHHH---HhcCCCeeeeeecceEEEEEeccchHHhHHHHHH
Q 002285 677 AENGMFLRLTT--GEWMT----TMPENLNMDWVDSVKHVFEYF---TERTPRSHFEVRETSLVWNYKYADLEFGRLQARD 747 (942)
Q Consensus 677 aehG~~ir~~~--~~w~~----~~~~~~~~~w~~~v~~il~~~---~~r~~Gs~iE~K~~sl~~hyr~ad~e~~~~qa~e 747 (942)
|+||++++.++ ..|+. .. ......|.+.+.++++.+ +.++||++||+|+++++||||+++++.. .+
T Consensus 162 GsHG~e~~~p~~g~~~~~~~~~~~-~~~~~~~~~~i~~v~~~l~~~~~~~pG~~VE~K~~slavHYR~a~~~~~----~~ 236 (354)
T PLN02151 162 GSHGMDIKGPEQGSKYKKENQSLL-CQPATEFLPVINEVYKKLVEKTKSIPGAKVENNKFCASVHFRCVEENKW----SD 236 (354)
T ss_pred EeCCceeecCCCCccccccccccc-cccchhhHHHHHHHHHHHHHHHhcCCCCEEEecCcEEEEEeCCCChHHH----HH
Confidence 99999998432 24531 11 123456777777666554 5789999999999999999999976522 23
Q ss_pred HHHHHhcCCCCCC-CeEEEEcCcEEEEEEC-CCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCcCC
Q 002285 748 ILQHLWSGPISNA-SVDVVQGGRSVEVRAV-GVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEPEL 825 (942)
Q Consensus 748 l~~~L~~~~~~~~-~v~v~~G~~~vEV~p~-gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~~~ 825 (942)
+..++ ..++.+. .+.++.|++++||+|. ++|||.||+.||+.+++.+ ...++++|||| |.|||+||++++..
T Consensus 237 l~~~l-~~v~~~~~~l~v~~GkkVvEvrP~~~~dKG~Av~~Ll~~~~~~~---~~~~~pvyiGD-D~TDEDaF~~L~~~- 310 (354)
T PLN02151 237 LANQV-RSVLKNYPKLMLTQGRKVLEIRPIIKWDKGKALEFLLESLGYAN---CTDVFPIYIGD-DRTDEDAFKILRDK- 310 (354)
T ss_pred HHHHH-HHHHhhCCCcEEecCCEEEEEeCCCCCCHHHHHHHHHHhccccc---CCCCeEEEEcC-CCcHHHHHHHHhhc-
Confidence 33334 3333333 4899999999999995 9999999999999988754 23478999999 99999999999642
Q ss_pred CCCCCCCCCCcccccccccccccCCccCCCCcccccccccchhhhhhcccccCCCcccccccccccccCCCcccccCCCc
Q 002285 826 PFESPAGPRANAADHLRRSSISQIPQAKSGPKVRFRKQRSLSSIERKVSNYLTGGIWRPAMRDRMTLNEGSSVLDLRGEN 905 (942)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 905 (942)
..
T Consensus 311 ------------------------------------------------------------------------------~~ 312 (354)
T PLN02151 311 ------------------------------------------------------------------------------KQ 312 (354)
T ss_pred ------------------------------------------------------------------------------CC
Confidence 02
Q ss_pred eEEEEeC--CCCCccceecCCHHHHHHHHHHhhhC
Q 002285 906 YFSCTVS--RKRSNARYFLGSSGDVVTLLNELAEC 938 (942)
Q Consensus 906 ~~t~~VG--~~~s~A~y~l~~~~~V~~~L~~L~~~ 938 (942)
+++|+|| .++|.|+|+|+||+||..||+.|++-
T Consensus 313 G~gI~Vg~~~k~T~A~y~L~dp~eV~~~L~~L~~~ 347 (354)
T PLN02151 313 GLGILVSKYAKETNASYSLQEPDEVMEFLERLVEW 347 (354)
T ss_pred CccEEeccCCCCCcceEeCCCHHHHHHHHHHHHHh
Confidence 5777777 68999999999999999999999864
No 14
>PLN03017 trehalose-phosphatase
Probab=100.00 E-value=1.5e-39 Score=360.72 Aligned_cols=246 Identities=18% Similarity=0.277 Sum_probs=197.9
Q ss_pred hhhhcccCCEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccCc
Q 002285 594 VDSYLQSNNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYNM 673 (942)
Q Consensus 594 ~~~y~~s~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l 673 (942)
+.++.+.++.+|||||||||+|++++| +.+.++++++++|++|++ ++.|+|+|||++..+.++++..++
T Consensus 103 ~~~~~~~k~~llflD~DGTL~Piv~~p---------~~a~i~~~~~~aL~~La~--~~~vaIvSGR~~~~l~~~~~l~~l 171 (366)
T PLN03017 103 IMEASRGKQIVMFLDYDGTLSPIVDDP---------DKAFMSSKMRRTVKKLAK--CFPTAIVTGRCIDKVYNFVKLAEL 171 (366)
T ss_pred HHHHhcCCCeEEEEecCCcCcCCcCCc---------ccccCCHHHHHHHHHHhc--CCcEEEEeCCCHHHHHHhhcccCc
Confidence 444556788999999999999999888 566899999999999994 689999999999999999776678
Q ss_pred eEEeecceEEEeCCCceee-------cccCCCChhHHHHHHHH---HHHHHhcCCCeeeeeecceEEEEEeccchHHhHH
Q 002285 674 WLAAENGMFLRLTTGEWMT-------TMPENLNMDWVDSVKHV---FEYFTERTPRSHFEVRETSLVWNYKYADLEFGRL 743 (942)
Q Consensus 674 ~liaehG~~ir~~~~~w~~-------~~~~~~~~~w~~~v~~i---l~~~~~r~~Gs~iE~K~~sl~~hyr~ad~e~~~~ 743 (942)
++||+||++++.+++.|.. .. ......|++.+.++ ++.+++++||++||+|+++++||||+++++..
T Consensus 172 ~l~g~hGa~i~~p~~~~~~~~~~~~~~~-~~~~~~~~~~i~~v~~~L~~~~~~~pGa~VE~K~~~vavHyR~ad~~~~-- 248 (366)
T PLN03017 172 YYAGSHGMDIKGPAKGFSRHKRVKQSLL-YQPANDYLPMIDEVYRQLLEKTKSTPGAKVENHKFCASVHFRCVDEKKW-- 248 (366)
T ss_pred eEEEcCCcEEecCCCcceeccccccccc-cccchhhHHHHHHHHHHHHHHHhcCCCCEEEecCcEEEEEcCcCCHHHH--
Confidence 9999999999854444321 00 01223466555555 66778899999999999999999999976542
Q ss_pred HHHHHHHHHhcCCCCCC-CeEEEEcCcEEEEEE-CCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhc
Q 002285 744 QARDILQHLWSGPISNA-SVDVVQGGRSVEVRA-VGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFF 821 (942)
Q Consensus 744 qa~el~~~L~~~~~~~~-~v~v~~G~~~vEV~p-~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~ 821 (942)
.++..++ ..++.++ .++++.|++++||+| .++|||.|++.||+.+++.+ ...++++|||| |.|||+||+++
T Consensus 249 --~~l~~~~-~~vl~~~~~l~v~~GkkVlEvRP~~~~dKG~Av~~LL~~l~~~~---~~~~~pvyiGD-D~TDEDaF~~L 321 (366)
T PLN03017 249 --SELVLQV-RSVLKNFPTLKLTQGRKVFEIRPMIEWDKGKALEFLLESLGFGN---TNNVFPVYIGD-DRTDEDAFKML 321 (366)
T ss_pred --HHHHHHH-HHHHHhCCCcEEeCCCeEEEecCCCCCCHHHHHHHHHHhccccc---CCCceEEEeCC-CCccHHHHHHH
Confidence 2333333 3333333 489999999999999 49999999999999998754 23578999999 99999999999
Q ss_pred CcCCCCCCCCCCCCcccccccccccccCCccCCCCcccccccccchhhhhhcccccCCCcccccccccccccCCCccccc
Q 002285 822 EPELPFESPAGPRANAADHLRRSSISQIPQAKSGPKVRFRKQRSLSSIERKVSNYLTGGIWRPAMRDRMTLNEGSSVLDL 901 (942)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 901 (942)
+..
T Consensus 322 ~~~----------------------------------------------------------------------------- 324 (366)
T PLN03017 322 RDR----------------------------------------------------------------------------- 324 (366)
T ss_pred hhc-----------------------------------------------------------------------------
Confidence 642
Q ss_pred CCCceEEEEeC--CCCCccceecCCHHHHHHHHHHhhhCc
Q 002285 902 RGENYFSCTVS--RKRSNARYFLGSSGDVVTLLNELAECP 939 (942)
Q Consensus 902 ~~~~~~t~~VG--~~~s~A~y~l~~~~~V~~~L~~L~~~~ 939 (942)
..+|+|+|| +++|.|+|+|+||+||..||+.|++-.
T Consensus 325 --~~G~gI~VG~~~k~T~A~y~L~dp~eV~~fL~~L~~~~ 362 (366)
T PLN03017 325 --GEGFGILVSKFPKDTDASYSLQDPSEVMDFLARLVEWK 362 (366)
T ss_pred --CCceEEEECCCCCCCcceEeCCCHHHHHHHHHHHHHHH
Confidence 137999999 589999999999999999999998643
No 15
>PLN02580 trehalose-phosphatase
Probab=100.00 E-value=1.9e-39 Score=363.09 Aligned_cols=246 Identities=20% Similarity=0.289 Sum_probs=198.2
Q ss_pred hhhhcccCCEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccCc
Q 002285 594 VDSYLQSNNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYNM 673 (942)
Q Consensus 594 ~~~y~~s~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l 673 (942)
+.+|.++++++|||||||||++++++| +.+.++++++++|++|+++ ..|+|||||++.+|+++++..++
T Consensus 111 ~~~~~~~k~~~LfLDyDGTLaPIv~~P---------d~A~~s~~~~~aL~~La~~--~~VAIVSGR~~~~L~~~l~~~~l 179 (384)
T PLN02580 111 IANFAKGKKIALFLDYDGTLSPIVDDP---------DRALMSDAMRSAVKNVAKY--FPTAIISGRSRDKVYELVGLTEL 179 (384)
T ss_pred HHHHhhcCCeEEEEecCCccCCCCCCc---------ccccCCHHHHHHHHHHhhC--CCEEEEeCCCHHHHHHHhCCCCc
Confidence 347889999999999999999999999 7899999999999999985 57999999999999999998899
Q ss_pred eEEeecceEEEeCCC-----ceeeccc-----------CCCChhHHHHHHHHHH---HHHhcCCCeeeeeecceEEEEEe
Q 002285 674 WLAAENGMFLRLTTG-----EWMTTMP-----------ENLNMDWVDSVKHVFE---YFTERTPRSHFEVRETSLVWNYK 734 (942)
Q Consensus 674 ~liaehG~~ir~~~~-----~w~~~~~-----------~~~~~~w~~~v~~il~---~~~~r~~Gs~iE~K~~sl~~hyr 734 (942)
+++|+||++++...+ .|..... .....+|.+.+.++++ .+++++||++||+|+++++||||
T Consensus 180 ~laGsHG~e~~~p~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~~~~i~~v~~~l~e~~~~~pGs~VE~K~~svavHYR 259 (384)
T PLN02580 180 YYAGSHGMDIMGPVRESVSNDHPNCIKSTDQQGKEVNLFQPASEFLPMIDEVFRSLVESTKDIKGAKVENHKFCVSVHYR 259 (384)
T ss_pred cEEEeCCceeecCCCCcccccccccccccccccccccccccchhhhhhHHHHHHHHHHHhccCCCCEEEecCcEEEEEeC
Confidence 999999999974211 1211100 0113467755555554 46777899999999999999999
Q ss_pred ccchHHhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEE-CCCCHHHHHHHHHHHhcccCCCCCCCc--eEEEEeCCC
Q 002285 735 YADLEFGRLQARDILQHLWSGPISNASVDVVQGGRSVEVRA-VGVTKGAAIDRILGEIVRHKGLKTPID--YVLCIGHFL 811 (942)
Q Consensus 735 ~ad~e~~~~qa~el~~~L~~~~~~~~~v~v~~G~~~vEV~p-~gvnKG~Av~~Ll~~l~~~~~~~~~~d--~vl~iGD~d 811 (942)
++++++...++.++...+ .. ...+.++.|++++||+| .++|||.||++|++++++.. .+ .++|||| |
T Consensus 260 ~a~~~~~~~~~~~l~~~l-~~---~~~l~v~~Gk~vlEVrP~~g~~KG~Av~~Ll~~~g~~~-----~d~~~pi~iGD-D 329 (384)
T PLN02580 260 NVDEKNWPLVAQCVHDVL-KK---YPRLRLTHGRKVLEVRPVIDWNKGKAVEFLLESLGLSN-----CDDVLPIYIGD-D 329 (384)
T ss_pred CCCchHHHHHHHHHHHHH-Hh---CCceEEEeCCeEEEEecCCCCCHHHHHHHHHHhcCCCc-----ccceeEEEECC-C
Confidence 998776666666665555 21 12488999999999999 59999999999999998532 22 3599999 9
Q ss_pred CCCHHHHHhcCcCCCCCCCCCCCCcccccccccccccCCccCCCCcccccccccchhhhhhcccccCCCccccccccccc
Q 002285 812 QKDEDIYTFFEPELPFESPAGPRANAADHLRRSSISQIPQAKSGPKVRFRKQRSLSSIERKVSNYLTGGIWRPAMRDRMT 891 (942)
Q Consensus 812 ~nDEdMF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 891 (942)
.|||+||++++..
T Consensus 330 ~TDedmF~~L~~~------------------------------------------------------------------- 342 (384)
T PLN02580 330 RTDEDAFKVLREG------------------------------------------------------------------- 342 (384)
T ss_pred chHHHHHHhhhcc-------------------------------------------------------------------
Confidence 9999999998642
Q ss_pred ccCCCcccccCCCceEEEEeC--CCCCccceecCCHHHHHHHHHHhhhCc
Q 002285 892 LNEGSSVLDLRGENYFSCTVS--RKRSNARYFLGSSGDVVTLLNELAECP 939 (942)
Q Consensus 892 ~~~~~~~~~~~~~~~~t~~VG--~~~s~A~y~l~~~~~V~~~L~~L~~~~ 939 (942)
..+++|+|| .++|.|+|+|+||+||..||+.|++-.
T Consensus 343 ------------~~G~~I~Vgn~~~~t~A~y~L~dp~eV~~~L~~L~~~~ 380 (384)
T PLN02580 343 ------------NRGYGILVSSVPKESNAFYSLRDPSEVMEFLKSLVTWK 380 (384)
T ss_pred ------------CCceEEEEecCCCCccceEEcCCHHHHHHHHHHHHHhh
Confidence 025677776 589999999999999999999998643
No 16
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=100.00 E-value=1.8e-40 Score=355.36 Aligned_cols=204 Identities=36% Similarity=0.571 Sum_probs=147.5
Q ss_pred EEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccCceEEeecceEEEe
Q 002285 606 ILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYNMWLAAENGMFLRL 685 (942)
Q Consensus 606 ~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l~liaehG~~ir~ 685 (942)
||||||||++++++| +.+.++++++++|++|++++++.|+|+|||++.+++.+++..+++++|+||++++.
T Consensus 1 ~lDyDGTL~p~~~~p---------~~~~~~~~~~~~L~~La~~~~~~v~IvSGR~~~~~~~~~~~~~i~l~gehG~e~~~ 71 (235)
T PF02358_consen 1 FLDYDGTLAPIVDDP---------DAAVPPPELRELLRALAADPNNTVAIVSGRSLDDLERFGGIPNIGLAGEHGAEIRR 71 (235)
T ss_dssp EEE-TTTSS---S-G---------GG----HHHHHHHHHHHHHSE--EEEE-SS-HHHHHHH-S-SS-EEEEGGGTEEEE
T ss_pred CcccCCccCCCCCCc---------cccCCCHHHHHHHHHHhccCCCEEEEEEeCCHHHhHHhcCCCCceEEEEeeEEecc
Confidence 799999999999999 68899999999999999999999999999999997777777789999999999997
Q ss_pred CCC-ceeecccCCCChhHHHHHHHHHHHHHhcCCCeeeeeecceEEEEEeccchHHhHHHHHHHHHHHhcCCCCC-CCeE
Q 002285 686 TTG-EWMTTMPENLNMDWVDSVKHVFEYFTERTPRSHFEVRETSLVWNYKYADLEFGRLQARDILQHLWSGPISN-ASVD 763 (942)
Q Consensus 686 ~~~-~w~~~~~~~~~~~w~~~v~~il~~~~~r~~Gs~iE~K~~sl~~hyr~ad~e~~~~qa~el~~~L~~~~~~~-~~v~ 763 (942)
+++ .|.... ...+..|++.+.++++++++++||++||+|+++++||||+++++++..++.++.+++ .+.... .+++
T Consensus 72 ~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~pG~~iE~K~~sv~~Hyr~~~~~~~~~~~~~l~~~l-~~~~~~~~~~~ 149 (235)
T PF02358_consen 72 PGGSEWTNLP-ADEDLEWKDEVREILEYFAERTPGSFIEDKEFSVAFHYRNAPPEFGEAQARELAEQL-REILASHPGLE 149 (235)
T ss_dssp TTE-EEE-TT-GGGGHHHHHHHHHHHTTHHHHSTT-EEEEETTEEEEE-TTS-ST----THHHHHHHH-HHHHHHH-T-E
T ss_pred Cccccccccc-cccchHHHHHHHHHHHHHHhhccCcEEEECCeEEEEEecCCCcchhhhHHHHHHHHH-HHHHHhCCCEE
Confidence 666 454332 345678999999999999999999999999999999999999998888888888887 433333 4799
Q ss_pred EEEcCcEEEEEECCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCcC
Q 002285 764 VVQGGRSVEVRAVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEPE 824 (942)
Q Consensus 764 v~~G~~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~~ 824 (942)
++.|+++|||+|.+++||.|+++|++.++..+ .+.+++||+|| |.|||+||++++..
T Consensus 150 v~~g~~~vEvrp~~~~KG~av~~ll~~~~~~~---~~~~~~l~~GD-D~tDE~~f~~~~~~ 206 (235)
T PF02358_consen 150 VVPGKKVVEVRPPGVNKGSAVRRLLEELPFAG---PKPDFVLYIGD-DRTDEDAFRALREL 206 (235)
T ss_dssp EEE-SSEEEEE-TT--HHHHHHHHHTTS------------EEEEES-SHHHHHHHHTTTTS
T ss_pred EEECCCEEEEEeCCCChHHHHHHHHHhcCccc---cccceeEEecC-CCCCHHHHHHHHhc
Confidence 99999999999999999999999999987432 34789999999 99999999999763
No 17
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=100.00 E-value=5.1e-35 Score=357.74 Aligned_cols=527 Identities=15% Similarity=0.158 Sum_probs=329.4
Q ss_pred CCCEEEEcCCchhhHHHHHHhhCCCCeEEEEeccCCCChhHhh-----------------cCCchHHHH-HHhhhccEEe
Q 002285 242 EGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSSEIHR-----------------TLPSRTELL-RSVLAADLVG 303 (942)
Q Consensus 242 ~~DiIwvHDyhL~llp~~Lr~~~p~~~I~~flH~PfP~~e~fr-----------------~lp~r~~il-~~ll~aDlIg 303 (942)
.+|+||.|++.--.+...|++.. ++|++++.|.- ..+-++ .++.|-+.- ..+..||.|.
T Consensus 310 ~pDvIHaHyw~sG~aa~~L~~~l-gVP~V~T~HSL--gr~K~~~ll~~g~~~~~~~~~~y~~~~Ri~~Ee~~l~~Ad~VI 386 (1050)
T TIGR02468 310 WPYVIHGHYADAGDSAALLSGAL-NVPMVLTGHSL--GRDKLEQLLKQGRMSKEEINSTYKIMRRIEAEELSLDASEIVI 386 (1050)
T ss_pred CCCEEEECcchHHHHHHHHHHhh-CCCEEEECccc--hhhhhhhhcccccccccccccccchHHHHHHHHHHHHhcCEEE
Confidence 37999999888777788887765 68899999963 122221 012222221 2455789988
Q ss_pred ecCHHHHHHHHHHH-------HHHhccccCCCceecCCe-eeEEEEeeCccCccccchhcCChhhH-------------H
Q 002285 304 FHTYDYARHFVSAC-------TRILGLEGTPEGVEDQGR-LTRVAAFPIGIDSDRFVRALELPQVQ-------------D 362 (942)
Q Consensus 304 F~t~~~~~~Fl~~~-------~r~l~~~~~~~~i~~~gr-~~~v~viP~GID~~~f~~~~~~~~~~-------------~ 362 (942)
-.|......-...- .|.|... ...++.+.|+ ..++.|||+|||++.|.+.....+.. .
T Consensus 387 asT~qE~~eq~~lY~~~~~~~~~~~~~~-~~~gv~~~g~~~~ri~VIPpGVD~~~F~P~~~~~~~~~~~~~~~~~~~~~~ 465 (1050)
T TIGR02468 387 TSTRQEIEEQWGLYDGFDVILERKLRAR-ARRGVSCYGRFMPRMAVIPPGMEFSHIVPHDGDMDGETEGNEEHPAKPDPP 465 (1050)
T ss_pred EeCHHHHHHHHHHhccCCchhhhhhhhh-hcccccccccCCCCeEEeCCCCcHHHccCCCccccchhcccccccccccch
Confidence 77766554322110 0111000 0123332232 34899999999999998742211100 0
Q ss_pred HHHHHHHHh--cCCceEEEeecccccCCHHHHHHHHHHhHHhCCCCCCcEEEEEEEcCCCCChhHH----HHHHHHHHHH
Q 002285 363 HINELKERF--AGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPSWRDKVVLIQIAVPTRTDVPEY----QKLTSQVHEI 436 (942)
Q Consensus 363 ~~~~lr~~~--~~~~iIl~VgRLd~~KGi~~lL~Af~~ll~~~P~~~~~vvLvqi~~psrgd~~~y----~~l~~~l~~l 436 (942)
....++..+ +++++|++|||+++.||+..+|+||..+.+..+.. ++.+| +|.. .+..+. .....++.++
T Consensus 466 ~~~~l~r~~~~pdkpvIL~VGRL~p~KGi~~LIeAf~~L~~l~~~~--nL~LI-iG~g--dd~d~l~~~~~~~l~~L~~l 540 (1050)
T TIGR02468 466 IWSEIMRFFTNPRKPMILALARPDPKKNITTLVKAFGECRPLRELA--NLTLI-MGNR--DDIDEMSSGSSSVLTSVLKL 540 (1050)
T ss_pred hhHHHHhhcccCCCcEEEEEcCCccccCHHHHHHHHHHhHhhccCC--CEEEE-EecC--chhhhhhccchHHHHHHHHH
Confidence 011233333 57789999999999999999999999987543221 24433 3321 111111 1234456666
Q ss_pred HHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHc----cEEEECCCCCCCChhHHHHHhhccCCCceEEEeCCCCcccc
Q 002285 437 VGRINGRYGTLTTVPIHHLDRSLDFHALCALYAIT----DVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQS 512 (942)
Q Consensus 437 v~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~A----Dv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~ 512 (942)
+.+.+.. + .|. |.+.++.+++..+|+.| ||||+||++||||+|++||||| +.|||+|+.+|..+.
T Consensus 541 i~~lgL~----g--~V~-FlG~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAc----GlPVVASdvGG~~EI 609 (1050)
T TIGR02468 541 IDKYDLY----G--QVA-YPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAH----GLPMVATKNGGPVDI 609 (1050)
T ss_pred HHHhCCC----C--eEE-ecCCCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHh----CCCEEEeCCCCcHHH
Confidence 6665331 1 254 46789999999999988 6999999999999999999999 358999999998888
Q ss_pred c--CCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHHhcCHHHHHHHHHHHHHHhHHHh-hhcccc------
Q 002285 513 L--GAGAILVNPWNITEVASSIGYALNMPADEREKRHLHNFMHVTTHTSQEWAATFVSELNDTIVEA-QIRTRQ------ 583 (942)
Q Consensus 513 l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~L~~~~~~~-~~~~~~------ 583 (942)
+ |.+|++|+|.|++++|++|.++|+. ++.++++.+++++.+..|++...+++++..+..+...+ +.+...
T Consensus 610 I~~g~nGlLVdP~D~eaLA~AL~~LL~D-pelr~~m~~~gr~~v~~FSWe~ia~~yl~~i~~~~~~~~~~~~~~~~~~~~ 688 (1050)
T TIGR02468 610 HRVLDNGLLVDPHDQQAIADALLKLVAD-KQLWAECRQNGLKNIHLFSWPEHCKTYLSRIASCRPRHPQWQRDTDDGEEA 688 (1050)
T ss_pred hccCCcEEEECCCCHHHHHHHHHHHhhC-HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHhccCccccccccccccc
Confidence 7 6899999999999999999999975 45667777888899999999999999998887764332 111000
Q ss_pred C---CCC-------------------------------CC-------hhhhh--------------------hhhc--cc
Q 002285 584 V---PPS-------------------------------LP-------IKGAV--------------------DSYL--QS 600 (942)
Q Consensus 584 ~---~~~-------------------------------l~-------~~~~~--------------------~~y~--~s 600 (942)
. .+. ++ +...+ ..|. ..
T Consensus 689 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 768 (1050)
T TIGR02468 689 SEDESPGDSLRDIQDISLNLSVDGDKESNNGSSNVEGSGPPADRVAKIENAVRSWSKSPKGSSAKAQQGSGAGKYPALRR 768 (1050)
T ss_pred ccccCccccccccccchhhccccccccccccccccccccchhhHHHHHHHHHhhccccccccccccccccccccCccccc
Confidence 0 000 00 00011 1121 22
Q ss_pred CCEEEE--EecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhh---hCCCCeEEEEcCCChhhHHHhhcccCc--
Q 002285 601 NNRLLI--LGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLC---DDPMTTVVVLSGSDRNVLDDNFGEYNM-- 673 (942)
Q Consensus 601 ~~rLi~--lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~---~d~g~~V~IvSGR~~~~L~~~~~~~~l-- 673 (942)
.+++|+ +|+|.| +.. .+.+.+.++.+. ......++++|||++..+.+++...++
T Consensus 769 ~~~~~via~D~d~~-~~~------------------~~~l~~~~~~~~~~~~~~~igfv~aTGR~l~~~~~~l~~~~lp~ 829 (1050)
T TIGR02468 769 RKRLFVIAVDCYDD-KDL------------------LQIIKNIFEAVRKERMEGSSGFILSTSMTISEIQSFLKSGGLNP 829 (1050)
T ss_pred cceEEEEEeccCCC-CCh------------------HHHHHHHHHHHhccccCCceEEEEEcCCCHHHHHHHHHhCCCCC
Confidence 356666 899999 221 122333344443 223478899999999999998866533
Q ss_pred ----eEEeecceEEEeCC------Cceeecc--cCCCChhH-HHHHHHHHHHHHhcC--------CCeeeeeecce--EE
Q 002285 674 ----WLAAENGMFLRLTT------GEWMTTM--PENLNMDW-VDSVKHVFEYFTERT--------PRSHFEVRETS--LV 730 (942)
Q Consensus 674 ----~liaehG~~ir~~~------~~w~~~~--~~~~~~~w-~~~v~~il~~~~~r~--------~Gs~iE~K~~s--l~ 730 (942)
.+||.-|.+|+.+. ..|..-. ..+.+..| .+.+.+.+..+.... ++...+....+ ..
T Consensus 830 ~~PD~lI~~vGTeIyy~~~~~~~~~~~~~D~~w~~hI~~rW~ge~~r~~L~~l~~~~~~~~~~~~~~l~~Q~~~~q~~~k 909 (1050)
T TIGR02468 830 TDFDALICNSGSELYYPSLNGSEEGKLVADQDYHSHIEYRWGGEGLRKTLVKWAASINEKKGENEEQIVEEDEESSTDHC 909 (1050)
T ss_pred CCCCEEEeCCCcceeccCcCCCCCCCceECHHHHHHHHccCCcHHHHHHHHHHhhhcccccccccccceecChhhCCCce
Confidence 58999999998641 2222100 01234566 344665555554322 33445444332 33
Q ss_pred EEEeccchHHhHHHHHHHHHHHhcCCCCCCCeEEEE--cCcEEEEEECCCCHHHHHHHHHHHhcccCCCCCCCceE-EEE
Q 002285 731 WNYKYADLEFGRLQARDILQHLWSGPISNASVDVVQ--GGRSVEVRAVGVTKGAAIDRILGEIVRHKGLKTPIDYV-LCI 807 (942)
Q Consensus 731 ~hyr~ad~e~~~~qa~el~~~L~~~~~~~~~v~v~~--G~~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~v-l~i 807 (942)
+-|.-.+++.. ...+++.+.|... ...+.++. +...++|.|..++||.||++|+.+++ ++.+.+ +++
T Consensus 910 ~SY~v~d~~~~-~~v~elr~~Lr~~---gLr~~~iys~~~~~LDVlP~~ASKgqAlRyL~~rwg------i~l~~v~Vfa 979 (1050)
T TIGR02468 910 YAFKVKDPSKV-PPVKELRKLLRIQ---GLRCHAVYCRNGTRLNVIPLLASRSQALRYLFVRWG------IELANMAVFV 979 (1050)
T ss_pred EEEEecCcccC-ccHHHHHHHHHhC---CCceEEEeecCCcEeeeeeCCCCHHHHHHHHHHHcC------CChHHeEEEe
Confidence 33431232221 1234555555111 22344433 45799999999999999999999998 566776 669
Q ss_pred eCCCCC-C-HHHHH
Q 002285 808 GHFLQK-D-EDIYT 819 (942)
Q Consensus 808 GD~d~n-D-EdMF~ 819 (942)
|| ..| | |+|+.
T Consensus 980 Gd-SGntD~e~Ll~ 992 (1050)
T TIGR02468 980 GE-SGDTDYEGLLG 992 (1050)
T ss_pred cc-CCCCCHHHHhC
Confidence 99 888 9 66653
No 18
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=100.00 E-value=1.2e-36 Score=327.70 Aligned_cols=238 Identities=21% Similarity=0.326 Sum_probs=201.9
Q ss_pred cCCEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccCceEEeec
Q 002285 600 SNNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYNMWLAAEN 679 (942)
Q Consensus 600 s~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l~liaeh 679 (942)
|++++|||||||||+++.++| ..+.++++++++|++|++++++.|+|+|||++.++...+...+++++|+|
T Consensus 1 ~~~~~l~lD~DGTL~~~~~~p---------~~~~~~~~~~~~L~~L~~~~~~~v~ivSGR~~~~~~~~~~~~~~~l~g~h 71 (244)
T TIGR00685 1 ARKRAFFFDYDGTLSEIVPDP---------DAAVVSDRLLTILQKLAARPHNAIWIISGRKFLEKWLGVKLPGLGLAGEH 71 (244)
T ss_pred CCcEEEEEecCccccCCcCCC---------cccCCCHHHHHHHHHHHhCCCCeEEEEECCChhhccccCCCCceeEEeec
Confidence 578999999999999998888 57789999999999999999999999999999999887766689999999
Q ss_pred ceEEEeCCC--ceeecccCCCChhHHHHHHHHHHHHHhcCCCeeeeeecceEEEEEecc-chHHhHHHHHHHHHHHhcCC
Q 002285 680 GMFLRLTTG--EWMTTMPENLNMDWVDSVKHVFEYFTERTPRSHFEVRETSLVWNYKYA-DLEFGRLQARDILQHLWSGP 756 (942)
Q Consensus 680 G~~ir~~~~--~w~~~~~~~~~~~w~~~v~~il~~~~~r~~Gs~iE~K~~sl~~hyr~a-d~e~~~~qa~el~~~L~~~~ 756 (942)
|++++.++. .|.... .....|++.+.++++++.++ ||+++|+|+++++||||.+ +++++..++.++..++ .
T Consensus 72 G~~~~~~g~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~-pG~~iE~K~~s~~~hyr~a~d~~~~~~~~~~~~~~~-~-- 145 (244)
T TIGR00685 72 GCEMKDNGSCQDWVNLT--EKIPSWKVRANELREEITTR-PGVFIERKGVALAWHYRQAPVPELARFRAKELKEKI-L-- 145 (244)
T ss_pred CEEEecCCCcceeeech--hhhhhHHHHHHHHHHHHhcC-CCcEEEecceEEEEEeccCCCcHHHHHHHHHHHHHH-h--
Confidence 999986322 244321 12247888888888888887 9999999999999999998 7888877888877766 2
Q ss_pred CCCCCeEEEEcCcEEEEEECCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCcCCCCCCCCCCCCc
Q 002285 757 ISNASVDVVQGGRSVEVRAVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEPELPFESPAGPRAN 836 (942)
Q Consensus 757 ~~~~~v~v~~G~~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~~~~~~~~~~~~~~ 836 (942)
...++.++.|+.++|++|.++|||.|++++++.++ ...+.++|||| +.|||+||++++...
T Consensus 146 -~~~~~~v~~g~~~~e~~p~~~~Kg~a~~~~~~~~~------~~~~~~i~iGD-~~~D~~~~~~~~~~~----------- 206 (244)
T TIGR00685 146 -SFTDLEVMDGKAVVELKPRFVNKGEIVKRLLWHQP------GSGISPVYLGD-DITDEDAFRVVNNQW----------- 206 (244)
T ss_pred -cCCCEEEEECCeEEEEeeCCCCHHHHHHHHHHhcc------cCCCceEEEcC-CCcHHHHHHHHhccc-----------
Confidence 23468899999999999999999999999999987 34678999999 999999999984320
Q ss_pred ccccccccccccCCccCCCCcccccccccchhhhhhcccccCCCcccccccccccccCCCcccccCCCceEEEEe--CCC
Q 002285 837 AADHLRRSSISQIPQAKSGPKVRFRKQRSLSSIERKVSNYLTGGIWRPAMRDRMTLNEGSSVLDLRGENYFSCTV--SRK 914 (942)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~V--G~~ 914 (942)
+ ..++++|+| |.+
T Consensus 207 ------------------------------------------~-----------------------~~g~~~v~v~~g~~ 221 (244)
T TIGR00685 207 ------------------------------------------G-----------------------NYGFYPVPIGSGSK 221 (244)
T ss_pred ------------------------------------------C-----------------------CCCeEEEEEecCCc
Confidence 0 014789999 888
Q ss_pred CCccceecCCHHHHHHHHHHhh
Q 002285 915 RSNARYFLGSSGDVVTLLNELA 936 (942)
Q Consensus 915 ~s~A~y~l~~~~~V~~~L~~L~ 936 (942)
.|.|.|+++++++|..+|+.|+
T Consensus 222 ~~~A~~~~~~~~~v~~~L~~l~ 243 (244)
T TIGR00685 222 KTVAKFHLTGPQQVLEFLGLLV 243 (244)
T ss_pred CCCceEeCCCHHHHHHHHHHHh
Confidence 9999999999999999999886
No 19
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=100.00 E-value=2.9e-36 Score=328.24 Aligned_cols=235 Identities=17% Similarity=0.167 Sum_probs=196.5
Q ss_pred CEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccCceEEeecce
Q 002285 602 NRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYNMWLAAENGM 681 (942)
Q Consensus 602 ~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l~liaehG~ 681 (942)
+++||+||||||++++++| ++..++++++++|++|++++++.|+|+|||++..+.++++.++++++|+||+
T Consensus 14 ~~li~~D~DGTLl~~~~~p---------~~~~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa 84 (266)
T PRK10187 14 NYAWFFDLDGTLAEIKPHP---------DQVVVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGA 84 (266)
T ss_pred CEEEEEecCCCCCCCCCCc---------ccccCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCC
Confidence 6899999999999998888 5778999999999999987899999999999999999999888889999999
Q ss_pred EEEeCCCceeecccCCCChhHHHHHHHHHHHHHhcCCCeeeeeecceEEEEEeccchHHhHHHHHHHHHHHhcCCCCCCC
Q 002285 682 FLRLTTGEWMTTMPENLNMDWVDSVKHVFEYFTERTPRSHFEVRETSLVWNYKYADLEFGRLQARDILQHLWSGPISNAS 761 (942)
Q Consensus 682 ~ir~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~r~~Gs~iE~K~~sl~~hyr~ad~e~~~~qa~el~~~L~~~~~~~~~ 761 (942)
+++..++.|.. ...+.+|...+.+.++.++.++||+++|.|+.+++||||.++.+. ....++.+.+ .+.. ..
T Consensus 85 ~i~~~~~~~~~---~~l~~~~~~~i~~~l~~~~~~~pg~~ve~k~~~~~~h~r~~~~~~--~~~~~l~~~i-~~~~--~~ 156 (266)
T PRK10187 85 ERRDINGKTHI---VHLPDAIARDISVQLHTALAQLPGAELEAKGMAFALHYRQAPQHE--DALLALAQRI-TQIW--PQ 156 (266)
T ss_pred eeecCCCCeee---ccCChhHHHHHHHHHHHHhccCCCcEEEeCCcEEEEECCCCCccH--HHHHHHHHHH-HhhC--Cc
Confidence 99865455432 123456677777888888889999999999999999999774211 1223333343 2211 13
Q ss_pred eEEEEcCcEEEEEECCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCcCCCCCCCCCCCCcccccc
Q 002285 762 VDVVQGGRSVEVRAVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEPELPFESPAGPRANAADHL 841 (942)
Q Consensus 762 v~v~~G~~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~~~~~~~~~~~~~~~~~~~ 841 (942)
+.+..|+.++||+|+++|||.||++++++++ +..+.++|||| |.|||+||+++...
T Consensus 157 ~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~------~~~~~v~~~GD-~~nD~~mf~~~~~~----------------- 212 (266)
T PRK10187 157 LALQPGKCVVEIKPRGTNKGEAIAAFMQEAP------FAGRTPVFVGD-DLTDEAGFAVVNRL----------------- 212 (266)
T ss_pred eEEeCCCEEEEeeCCCCCHHHHHHHHHHhcC------CCCCeEEEEcC-CccHHHHHHHHHhc-----------------
Confidence 6678899999999999999999999999988 45688999999 99999999999542
Q ss_pred cccccccCCccCCCCcccccccccchhhhhhcccccCCCcccccccccccccCCCcccccCCCceEEEEeCCCCCcccee
Q 002285 842 RRSSISQIPQAKSGPKVRFRKQRSLSSIERKVSNYLTGGIWRPAMRDRMTLNEGSSVLDLRGENYFSCTVSRKRSNARYF 921 (942)
Q Consensus 842 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~VG~~~s~A~y~ 921 (942)
++++|+||.+.|.|+|+
T Consensus 213 ---------------------------------------------------------------~g~~vavg~a~~~A~~~ 229 (266)
T PRK10187 213 ---------------------------------------------------------------GGISVKVGTGATQASWR 229 (266)
T ss_pred ---------------------------------------------------------------CCeEEEECCCCCcCeEe
Confidence 36999999999999999
Q ss_pred cCCHHHHHHHHHHhhhCcC
Q 002285 922 LGSSGDVVTLLNELAECPQ 940 (942)
Q Consensus 922 l~~~~~V~~~L~~L~~~~~ 940 (942)
|++|++|.+||+.|+..+|
T Consensus 230 l~~~~~v~~~L~~l~~~~~ 248 (266)
T PRK10187 230 LAGVPDVWSWLEMITTAQQ 248 (266)
T ss_pred CCCHHHHHHHHHHHHHhhh
Confidence 9999999999999997665
No 20
>PLN02939 transferase, transferring glycosyl groups
Probab=99.94 E-value=7.5e-25 Score=265.08 Aligned_cols=322 Identities=14% Similarity=0.176 Sum_probs=220.6
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCEEEEcCCchhhHHHHHHhh-----CCCCeEEEEeccC-CCC---hhHhh--cCCc-
Q 002285 221 QFDAYKRANQMFAKVVNNIYEEGDVVWCHDYHLMFLPQCLKEY-----NNNMKVGWFLHTP-FPS---SEIHR--TLPS- 288 (942)
Q Consensus 221 ~w~~Y~~vN~~fa~~i~~~~~~~DiIwvHDyhL~llp~~Lr~~-----~p~~~I~~flH~P-fP~---~e~fr--~lp~- 288 (942)
....|.-+.++.++.+.+.-..+||||+||||..++|.++.+. ..+++++|++|.- |.. .+.+. .+|+
T Consensus 589 n~~RF~~FsrAaLe~~~~~~~~PDIIH~HDW~TaLV~pll~~~y~~~~~~~~ktVfTIHNl~yQG~f~~~~l~~lGL~~~ 668 (977)
T PLN02939 589 DFKRFSYFSRAALELLYQSGKKPDIIHCHDWQTAFVAPLYWDLYAPKGFNSARICFTCHNFEYQGTAPASDLASCGLDVH 668 (977)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCEEEECCccHHHHHHHHHHHHhhccCCCCcEEEEeCCCcCCCcCCHHHHHHcCCCHH
Confidence 3455555666666655544347899999999999985554432 3567899999975 221 11111 1221
Q ss_pred --------------hHHH-HHHhhhccEEeecCHHHHHHHHHHHHHHhccccCCCceecCCeeeEEEEeeCccCccccch
Q 002285 289 --------------RTEL-LRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVR 353 (942)
Q Consensus 289 --------------r~~i-l~~ll~aDlIgF~t~~~~~~Fl~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~ 353 (942)
+-.+ ..++..||.|..-++.|++.... ..-.|++. .+..+..++.+||||||++.|.+
T Consensus 669 ~l~~~d~le~~~~~~iN~LK~GIv~AD~VtTVSptYA~EI~t--e~G~GL~~-----~L~~~~~Kl~gIlNGID~e~wnP 741 (977)
T PLN02939 669 QLDRPDRMQDNAHGRINVVKGAIVYSNIVTTVSPTYAQEVRS--EGGRGLQD-----TLKFHSKKFVGILNGIDTDTWNP 741 (977)
T ss_pred HccChhhhhhccCCchHHHHHHHHhCCeeEeeeHHHHHHHHH--HhccchHH-----HhccccCCceEEecceehhhcCC
Confidence 1112 24666799999888888887554 11011110 12345678999999999999886
Q ss_pred hcCC-------h-hh---HHHHHHHHHHhc------CCceEEEeecccccCCHHHHHHHHHHhHHhCCCCCCcEEEEEEE
Q 002285 354 ALEL-------P-QV---QDHINELKERFA------GRKVMLGVDRLDMIKGIPQKILAFEKFLEENPSWRDKVVLIQIA 416 (942)
Q Consensus 354 ~~~~-------~-~~---~~~~~~lr~~~~------~~~iIl~VgRLd~~KGi~~lL~Af~~ll~~~P~~~~~vvLvqi~ 416 (942)
.... . .. ......++++++ +.++|++||||++.||++.+++|+.++++ ++ +.|+++
T Consensus 742 atD~~L~~~Ys~~dl~GK~~nK~aLRkelGL~~~d~d~pLIg~VGRL~~QKGiDlLleA~~~Ll~--~d----vqLVIv- 814 (977)
T PLN02939 742 STDRFLKVQYNANDLQGKAANKAALRKQLGLSSADASQPLVGCITRLVPQKGVHLIRHAIYKTAE--LG----GQFVLL- 814 (977)
T ss_pred ccccccccccChhhhhhhhhhhHHHHHHhCCCcccccceEEEEeecCCcccChHHHHHHHHHHhh--cC----CEEEEE-
Confidence 5321 0 00 012345676763 35899999999999999999999998875 33 345544
Q ss_pred cCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhccC
Q 002285 417 VPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQAS 496 (942)
Q Consensus 417 ~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~ 496 (942)
|+|++. .+++++.+++.+++.. ..|.|+ +.++......+|+.||+||+||.+|||||+++|||+|
T Consensus 815 ----GdGp~~-~~e~eL~~La~~l~l~------drV~Fl-G~~de~lah~IYAaADIFLmPSr~EPfGLvqLEAMAy--- 879 (977)
T PLN02939 815 ----GSSPVP-HIQREFEGIADQFQSN------NNIRLI-LKYDEALSHSIYAASDMFIIPSMFEPCGLTQMIAMRY--- 879 (977)
T ss_pred ----eCCCcH-HHHHHHHHHHHHcCCC------CeEEEE-eccCHHHHHHHHHhCCEEEECCCccCCcHHHHHHHHC---
Confidence 444421 3456677777765321 125554 5577777789999999999999999999999999999
Q ss_pred CCceEEEeCCCCccccc-----------CCceEEECCCCHHHHHHHHHHHhC---CCHHHHHHHHHHHhHHHHhcCHHHH
Q 002285 497 KKGVLILSEFAGAAQSL-----------GAGAILVNPWNITEVASSIGYALN---MPADEREKRHLHNFMHVTTHTSQEW 562 (942)
Q Consensus 497 ~~G~lIlSe~~G~~~~l-----------g~~gllVnP~D~~~lA~aI~~aL~---m~~~er~~r~~~~~~~v~~~~~~~W 562 (942)
+.|+|++..+|..+.+ |.+|++|+|.|+++++++|.+++. ..++.++.+.++. ....|++...
T Consensus 880 -GtPPVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf~~~D~eaLa~AL~rAL~~~~~dpe~~~~L~~~a--m~~dFSWe~~ 956 (977)
T PLN02939 880 -GSVPIVRKTGGLNDSVFDFDDETIPVELRNGFTFLTPDEQGLNSALERAFNYYKRKPEVWKQLVQKD--MNIDFSWDSS 956 (977)
T ss_pred -CCCEEEecCCCCcceeecCCccccccCCCceEEecCCCHHHHHHHHHHHHHHhccCHHHHHHHHHHH--HHhcCCHHHH
Confidence 3589999999988765 257999999999999999999875 3455555554443 2367999999
Q ss_pred HHHHHHHHHHhH
Q 002285 563 AATFVSELNDTI 574 (942)
Q Consensus 563 ~~~fl~~L~~~~ 574 (942)
++.++.....+.
T Consensus 957 A~qYeeLY~~ll 968 (977)
T PLN02939 957 ASQYEELYQRAV 968 (977)
T ss_pred HHHHHHHHHHHH
Confidence 999887666554
No 21
>PLN02316 synthase/transferase
Probab=99.94 E-value=3.2e-24 Score=264.18 Aligned_cols=310 Identities=14% Similarity=0.120 Sum_probs=219.4
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCEEEEcCCchhhHHHHHHhh-----CCCCeEEEEeccCCCChhHhhcCCchHHHHHH
Q 002285 221 QFDAYKRANQMFAKVVNNIYEEGDVVWCHDYHLMFLPQCLKEY-----NNNMKVGWFLHTPFPSSEIHRTLPSRTELLRS 295 (942)
Q Consensus 221 ~w~~Y~~vN~~fa~~i~~~~~~~DiIwvHDyhL~llp~~Lr~~-----~p~~~I~~flH~PfP~~e~fr~lp~r~~il~~ 295 (942)
....|-.+++..++.+.+.-..+||||+||+|-.++|.++++. ..++++++++|..- |. ...+-.+
T Consensus 688 d~~RF~~F~~Aale~l~~~~~~PDIIHaHDW~talva~llk~~~~~~~~~~~p~V~TiHnl~-----~~----~n~lk~~ 758 (1036)
T PLN02316 688 DGERFGFFCHAALEFLLQSGFHPDIIHCHDWSSAPVAWLFKDHYAHYGLSKARVVFTIHNLE-----FG----ANHIGKA 758 (1036)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCEEEECCChHHHHHHHHHHhhhhhccCCCCEEEEeCCcc-----cc----hhHHHHH
Confidence 3566666677777766554447899999999999999998874 35688999999742 11 1123456
Q ss_pred hhhccEEeecCHHHHHHHHHHHHHHhccccCCCceecCCeeeEEEEeeCccCccccchhcCC--h-----h----h-HHH
Q 002285 296 VLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALEL--P-----Q----V-QDH 363 (942)
Q Consensus 296 ll~aDlIgF~t~~~~~~Fl~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~--~-----~----~-~~~ 363 (942)
+..||.|.--++.|++..... + . ...+..++.+||||||++.|.+.... + + . ...
T Consensus 759 l~~AD~ViTVS~tya~EI~~~-----~------~--l~~~~~Kl~vI~NGID~~~w~P~tD~~lp~~y~~~~~~~gK~~~ 825 (1036)
T PLN02316 759 MAYADKATTVSPTYSREVSGN-----S------A--IAPHLYKFHGILNGIDPDIWDPYNDNFIPVPYTSENVVEGKRAA 825 (1036)
T ss_pred HHHCCEEEeCCHHHHHHHHhc-----c------C--cccccCCEEEEECCccccccCCcccccccccCCchhhhhhhhhh
Confidence 778999998888887665431 0 0 11234688999999999988764210 0 0 0 112
Q ss_pred HHHHHHHhc----CCceEEEeecccccCCHHHHHHHHHHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHh
Q 002285 364 INELKERFA----GRKVMLGVDRLDMIKGIPQKILAFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGR 439 (942)
Q Consensus 364 ~~~lr~~~~----~~~iIl~VgRLd~~KGi~~lL~Af~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~ 439 (942)
...++++++ +.++|++||||++.||++.+++|+.++++. + +.||++ |+||+ ..++.++.+++.+
T Consensus 826 k~~Lr~~lGL~~~d~plVg~VGRL~~qKGvdlLi~Al~~ll~~--~----~qlVIv-----G~Gpd-~~~e~~l~~La~~ 893 (1036)
T PLN02316 826 KEALQQRLGLKQADLPLVGIITRLTHQKGIHLIKHAIWRTLER--N----GQVVLL-----GSAPD-PRIQNDFVNLANQ 893 (1036)
T ss_pred HHHHHHHhCCCcccCeEEEEEeccccccCHHHHHHHHHHHhhc--C----cEEEEE-----eCCCC-HHHHHHHHHHHHH
Confidence 334666663 568999999999999999999999999863 3 334444 44443 2356777788777
Q ss_pred hccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhccCCCceEEEeCCCCccccc--C---
Q 002285 440 INGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSL--G--- 514 (942)
Q Consensus 440 IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l--g--- 514 (942)
++..+. ..|.|+. ..+......+|+.||+||+||++|||||+.+|||+| +.|+|++..+|..+.+ +
T Consensus 894 Lg~~~~----~rV~f~g-~~de~lah~iyaaADiflmPS~~EP~GLvqLEAMa~----GtppVvs~vGGL~DtV~d~d~~ 964 (1036)
T PLN02316 894 LHSSHH----DRARLCL-TYDEPLSHLIYAGADFILVPSIFEPCGLTQLTAMRY----GSIPVVRKTGGLFDTVFDVDHD 964 (1036)
T ss_pred hCccCC----CeEEEEe-cCCHHHHHHHHHhCcEEEeCCcccCccHHHHHHHHc----CCCeEEEcCCCcHhhccccccc
Confidence 654332 1255443 344444458999999999999999999999999999 2479999999999887 2
Q ss_pred ----------CceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHH-HhcCHHHHHHHHHHHHHHh
Q 002285 515 ----------AGAILVNPWNITEVASSIGYALNMPADEREKRHLHNFMHV-TTHTSQEWAATFVSELNDT 573 (942)
Q Consensus 515 ----------~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~fl~~L~~~ 573 (942)
.+|++|+|.|+++++.+|.++|....+.+..+....++.+ ..+++..-++.++.....+
T Consensus 965 ~~~~~~~g~~~tGflf~~~d~~aLa~AL~raL~~~~~~~~~~~~~~r~~m~~dFSW~~~A~~Y~~LY~~a 1034 (1036)
T PLN02316 965 KERAQAQGLEPNGFSFDGADAAGVDYALNRAISAWYDGRDWFNSLCKRVMEQDWSWNRPALDYMELYHSA 1034 (1036)
T ss_pred cccccccccCCceEEeCCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHH
Confidence 4799999999999999999999864333333333344443 5689999998887766544
No 22
>PRK00654 glgA glycogen synthase; Provisional
Probab=99.94 E-value=1.8e-24 Score=254.49 Aligned_cols=310 Identities=19% Similarity=0.225 Sum_probs=205.0
Q ss_pred HHHHHHHHHHhhcCCCCEEEEcCCchhhHHHHHHhhC----CCCeEEEEeccCCC-C---hhHhhc--CCc---------
Q 002285 228 ANQMFAKVVNNIYEEGDVVWCHDYHLMFLPQCLKEYN----NNMKVGWFLHTPFP-S---SEIHRT--LPS--------- 288 (942)
Q Consensus 228 vN~~fa~~i~~~~~~~DiIwvHDyhL~llp~~Lr~~~----p~~~I~~flH~PfP-~---~e~fr~--lp~--------- 288 (942)
+++...+.+...-.++||||+||||-.+++.++++.. .+++++++.|..-. . .+.+.. +|+
T Consensus 104 f~~~~~~~~~~~~~~pDiiH~h~w~~~~~~~~l~~~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 183 (466)
T PRK00654 104 FSWAAAEFAEGLDPRPDIVHAHDWHTGLIPALLKEKYWRGYPDIKTVFTIHNLAYQGLFPAEILGELGLPAEAFHLEGLE 183 (466)
T ss_pred HHHHHHHHHHhcCCCCceEEECCcHHHHHHHHHHHhhhccCCCCCEEEEcCCCcCCCcCCHHHHHHcCCChHHcCchhhh
Confidence 3444444333322378999999999999999998653 46899999998621 1 111111 110
Q ss_pred ----hHHHHHHhhhccEEeecCHHHHHHHHHHHHHHhccccCCCce--ecCCeeeEEEEeeCccCccccchhcCCh----
Q 002285 289 ----RTELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGV--EDQGRLTRVAAFPIGIDSDRFVRALELP---- 358 (942)
Q Consensus 289 ----r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~l~~~~~~~~i--~~~gr~~~v~viP~GID~~~f~~~~~~~---- 358 (942)
..-+..++..||.|...+..+++..... .. ..++ .+..+..++.++|||||.+.|.+.....
T Consensus 184 ~~~~~~~~~~~~~~ad~vitvS~~~~~ei~~~---~~-----~~gl~~~~~~~~~ki~vI~NGid~~~~~p~~~~~~~~~ 255 (466)
T PRK00654 184 FYGQISFLKAGLYYADRVTTVSPTYAREITTP---EF-----GYGLEGLLRARSGKLSGILNGIDYDIWNPETDPLLAAN 255 (466)
T ss_pred cCCcccHHHHHHHhcCcCeeeCHHHHHHhccc---cC-----CcChHHHHHhcccCceEecCCCCccccCCccCcccccc
Confidence 0112234556777666666555433210 00 0001 0112355799999999999987642110
Q ss_pred -------hhHHHHHHHHHHhc----CCceEEEeecccccCCHHHHHHHHHHhHHhCCCCCCcEEEEEEEcCCCCChhHHH
Q 002285 359 -------QVQDHINELKERFA----GRKVMLGVDRLDMIKGIPQKILAFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQ 427 (942)
Q Consensus 359 -------~~~~~~~~lr~~~~----~~~iIl~VgRLd~~KGi~~lL~Af~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~ 427 (942)
...+....++++++ +.++|++|||+++.||++.+|+|+++++++ + +.|+++| +++.
T Consensus 256 ~~~~~~~~k~~~k~~l~~~~gl~~~~~~~i~~vGRl~~~KG~~~li~a~~~l~~~--~----~~lvivG-----~g~~-- 322 (466)
T PRK00654 256 YSADDLEGKAENKRALQERFGLPDDDAPLFAMVSRLTEQKGLDLVLEALPELLEQ--G----GQLVLLG-----TGDP-- 322 (466)
T ss_pred cChhhhhchHHHHHHHHHHhCCCCCCCcEEEEeeccccccChHHHHHHHHHHHhc--C----CEEEEEe-----cCcH--
Confidence 00112345666663 568999999999999999999999998764 3 4455554 3321
Q ss_pred HHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhccCCCceEEEeCCC
Q 002285 428 KLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFA 507 (942)
Q Consensus 428 ~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~ 507 (942)
.+++++++++.+.+.+ +.++.+. +.+.+..+|+.||+||+||.+||||++.+|||+| +.|+|+|+.+
T Consensus 323 ~~~~~l~~l~~~~~~~--------v~~~~g~-~~~~~~~~~~~aDv~v~PS~~E~~gl~~lEAma~----G~p~V~~~~g 389 (466)
T PRK00654 323 ELEEAFRALAARYPGK--------VGVQIGY-DEALAHRIYAGADMFLMPSRFEPCGLTQLYALRY----GTLPIVRRTG 389 (466)
T ss_pred HHHHHHHHHHHHCCCc--------EEEEEeC-CHHHHHHHHhhCCEEEeCCCCCCchHHHHHHHHC----CCCEEEeCCC
Confidence 2455677776655321 4444443 5666789999999999999999999999999999 3579999999
Q ss_pred Cccccc--C------CceEEECCCCHHHHHHHHHHHhCC--CHHHHHHHHHHHhHHHHhcCHHHHHHHHHHHHHHh
Q 002285 508 GAAQSL--G------AGAILVNPWNITEVASSIGYALNM--PADEREKRHLHNFMHVTTHTSQEWAATFVSELNDT 573 (942)
Q Consensus 508 G~~~~l--g------~~gllVnP~D~~~lA~aI~~aL~m--~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~L~~~ 573 (942)
|..+.+ + .+|++|+|.|+++++++|.++++. .++.++++.++++ ...++++.-++++++...++
T Consensus 390 G~~e~v~~~~~~~~~~~G~lv~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~lY~~~ 463 (466)
T PRK00654 390 GLADTVIDYNPEDGEATGFVFDDFNAEDLLRALRRALELYRQPPLWRALQRQAM--AQDFSWDKSAEEYLELYRRL 463 (466)
T ss_pred CccceeecCCCCCCCCceEEeCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHh--ccCCChHHHHHHHHHHHHHH
Confidence 999887 4 679999999999999999999863 2333444444443 25788888888887665543
No 23
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=99.94 E-value=6.9e-25 Score=250.00 Aligned_cols=300 Identities=23% Similarity=0.223 Sum_probs=204.3
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCEEEEcCCchhhHHHHHHhhCCCCeEEEEeccCCCChhHhhcCCchHHHHHHhhhcc
Q 002285 221 QFDAYKRANQMFAKVVNNIYEEGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSSEIHRTLPSRTELLRSVLAAD 300 (942)
Q Consensus 221 ~w~~Y~~vN~~fa~~i~~~~~~~DiIwvHDyhL~llp~~Lr~~~p~~~I~~flH~PfP~~e~fr~lp~r~~il~~ll~aD 300 (942)
.+..|...++.++..+. ...++|+||+|+++.+.++...+. ..+++++++|+++.... .. .+..+...+..+|
T Consensus 65 ~~~~~~~~~~~~~~~~~-~~~~~Dvv~~h~~~~~~~~~~~~~--~~~~~i~~~H~~~~~~~--~~--~~~~~~~~~~~~d 137 (372)
T cd03792 65 EKEIYLEWNEENAERPL-LDLDADVVVIHDPQPLALPLFKKK--RGRPWIWRCHIDLSSPN--RR--VWDFLQPYIEDYD 137 (372)
T ss_pred HHHHHHHHHHHHhcccc-ccCCCCEEEECCCCchhHHHhhhc--CCCeEEEEeeeecCCCc--HH--HHHHHHHHHHhCC
Confidence 36677777777765432 223689999999997666655442 36778889999875321 10 0122333344577
Q ss_pred EEeecCHHHHHHHHHHHHHHhccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHh---cCCceE
Q 002285 301 LVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERF---AGRKVM 377 (942)
Q Consensus 301 lIgF~t~~~~~~Fl~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iI 377 (942)
.+.+.+.++++. . +. ..++ ++|+|||+.........+ +....+++++ .++++|
T Consensus 138 ~~i~~~~~~~~~----------------~--~~--~~~~-vipngvd~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~i 193 (372)
T cd03792 138 AAVFHLPEYVPP----------------Q--VP--PRKV-IIPPSIDPLSGKNRELSP---ADIEYILEKYGIDPERPYI 193 (372)
T ss_pred EEeecHHHhcCC----------------C--CC--CceE-EeCCCCCCCccccCCCCH---HHHHHHHHHhCCCCCCcEE
Confidence 776655322111 1 11 1234 899999975422111111 2233455555 377899
Q ss_pred EEeecccccCCHHHHHHHHHHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCC
Q 002285 378 LGVDRLDMIKGIPQKILAFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDR 457 (942)
Q Consensus 378 l~VgRLd~~KGi~~lL~Af~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~ 457 (942)
+++||+++.||++.+|+|++.+.+.+|+++ |+++|.+.. ..+++.++.+++.+ +.+.. ..|.|++.
T Consensus 194 ~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~----l~i~G~g~~-~~~~~~~~~~~~~~---~~~~~------~~v~~~~~ 259 (372)
T cd03792 194 TQVSRFDPWKDPFGVIDAYRKVKERVPDPQ----LVLVGSGAT-DDPEGWIVYEEVLE---YAEGD------PDIHVLTL 259 (372)
T ss_pred EEEeccccccCcHHHHHHHHHHHhhCCCCE----EEEEeCCCC-CCchhHHHHHHHHH---HhCCC------CCeEEEec
Confidence 999999999999999999999988878754 665654321 11223333233222 22211 13666544
Q ss_pred C-CCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhccCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHH
Q 002285 458 S-LDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVASSIGY 534 (942)
Q Consensus 458 ~-v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l--g~~gllVnP~D~~~lA~aI~~ 534 (942)
. ++.+++.++|++||+|++||.+||||++++||||| +.|+|+|+.+|..+.+ |.+|+++++ .++++++|.+
T Consensus 260 ~~~~~~~~~~~~~~ad~~v~~s~~Eg~g~~~lEA~a~----G~Pvv~s~~~~~~~~i~~~~~g~~~~~--~~~~a~~i~~ 333 (372)
T cd03792 260 PPVSDLEVNALQRASTVVLQKSIREGFGLTVTEALWK----GKPVIAGPVGGIPLQIEDGETGFLVDT--VEEAAVRILY 333 (372)
T ss_pred CCCCHHHHHHHHHhCeEEEeCCCccCCCHHHHHHHHc----CCCEEEcCCCCchhhcccCCceEEeCC--cHHHHHHHHH
Confidence 3 48999999999999999999999999999999999 3689999999988877 678999874 5688999999
Q ss_pred HhCCCHHHHHHHHHHHhHHH-HhcCHHHHHHHHHHHHHH
Q 002285 535 ALNMPADEREKRHLHNFMHV-TTHTSQEWAATFVSELND 572 (942)
Q Consensus 535 aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~fl~~L~~ 572 (942)
++++ ++++.++.+++++++ ..|+++..++++++.+++
T Consensus 334 ll~~-~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~ 371 (372)
T cd03792 334 LLRD-PELRRKMGANAREHVRENFLITRHLKDYLYLISK 371 (372)
T ss_pred HHcC-HHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHh
Confidence 9986 567777788888876 589999999999887764
No 24
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=99.93 E-value=3.3e-24 Score=252.67 Aligned_cols=313 Identities=19% Similarity=0.253 Sum_probs=211.9
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCEEEEcCCchhhHHHHHHhhCC--CCeEEEEeccCCCC----hhHhhc--CCch-----
Q 002285 223 DAYKRANQMFAKVVNNIYEEGDVVWCHDYHLMFLPQCLKEYNN--NMKVGWFLHTPFPS----SEIHRT--LPSR----- 289 (942)
Q Consensus 223 ~~Y~~vN~~fa~~i~~~~~~~DiIwvHDyhL~llp~~Lr~~~p--~~~I~~flH~PfP~----~e~fr~--lp~r----- 289 (942)
..+..+++...+.+.+.-..+|+||+||+|..++|.++++... +++++++.|..... .+.+.. +|+.
T Consensus 109 ~r~~~f~~a~~~~~~~~~~~~DiiH~hdw~~~~~~~~l~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~ 188 (473)
T TIGR02095 109 ERFAFFSRAAAELLSGLGWQPDVVHAHDWHTALVPALLKAVYRPNPIKTVFTIHNLAYQGVFPADDFSELGLPPEYFHME 188 (473)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCEEEECCcHHHHHHHHHHhhccCCCCCEEEEcCCCccCCcCCHHHHHHcCCChHHcCch
Confidence 3444455555555544334789999999999999999987764 38999999986421 122221 1110
Q ss_pred --------HHHHHHhhhccEEeecCHHHHHHHHHHHHHHhccccCCCcee--cCCeeeEEEEeeCccCccccchhcCCh-
Q 002285 290 --------TELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVE--DQGRLTRVAAFPIGIDSDRFVRALELP- 358 (942)
Q Consensus 290 --------~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~l~~~~~~~~i~--~~gr~~~v~viP~GID~~~f~~~~~~~- 358 (942)
..+..++..||.|..-+..|++..... ..+ .++. +..+..++.++|||||.+.|.+.....
T Consensus 189 ~~~~~~~~~~~k~~~~~ad~v~tVS~~~~~ei~~~---~~~-----~~l~~~l~~~~~ki~~I~NGid~~~~~p~~~~~~ 260 (473)
T TIGR02095 189 GLEFYGRVNFLKGGIVYADRVTTVSPTYAREILTP---EFG-----YGLDGVLKARSGKLRGILNGIDTEVWNPATDPYL 260 (473)
T ss_pred hhhcCCchHHHHHHHHhCCcCeecCHhHHHHhcCC---cCC-----ccchhHHHhcCCCeEEEeCCCCccccCCCCCccc
Confidence 012234556677666666555543221 000 0110 111356899999999999987642210
Q ss_pred ----------hhHHHHHHHHHHhc-----CCceEEEeecccccCCHHHHHHHHHHhHHhCCCCCCcEEEEEEEcCCCCCh
Q 002285 359 ----------QVQDHINELKERFA-----GRKVMLGVDRLDMIKGIPQKILAFEKFLEENPSWRDKVVLIQIAVPTRTDV 423 (942)
Q Consensus 359 ----------~~~~~~~~lr~~~~-----~~~iIl~VgRLd~~KGi~~lL~Af~~ll~~~P~~~~~vvLvqi~~psrgd~ 423 (942)
.-......++++++ ++++|++|||+.+.||++.+++|++++.++. +.|+++| ++
T Consensus 261 ~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~------~~lvi~G-----~g 329 (473)
T TIGR02095 261 KANYSADDLAGKAENKEALQEELGLPVDDDVPLFGVISRLTQQKGVDLLLAALPELLELG------GQLVVLG-----TG 329 (473)
T ss_pred ccCcCccchhhhhhhHHHHHHHcCCCccCCCCEEEEEecCccccChHHHHHHHHHHHHcC------cEEEEEC-----CC
Confidence 00112344666663 5789999999999999999999999997642 4455553 34
Q ss_pred hHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhccCCCceEEE
Q 002285 424 PEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLIL 503 (942)
Q Consensus 424 ~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIl 503 (942)
+ ..+++++++++.+.+. .+.++ ...+.+++..+|+.||++|+||.+||||++.+|||+| +.|+|+
T Consensus 330 ~--~~~~~~l~~~~~~~~~--------~v~~~-~~~~~~~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~----G~pvI~ 394 (473)
T TIGR02095 330 D--PELEEALRELAERYPG--------NVRVI-IGYDEALAHLIYAGADFILMPSRFEPCGLTQLYAMRY----GTVPIV 394 (473)
T ss_pred C--HHHHHHHHHHHHHCCC--------cEEEE-EcCCHHHHHHHHHhCCEEEeCCCcCCcHHHHHHHHHC----CCCeEE
Confidence 2 1245667777654322 14443 4467888899999999999999999999999999999 358999
Q ss_pred eCCCCccccc--C------CceEEECCCCHHHHHHHHHHHhCC---CHHHHHHHHHHHhHHHHhcCHHHHHHHHHHHHH
Q 002285 504 SEFAGAAQSL--G------AGAILVNPWNITEVASSIGYALNM---PADEREKRHLHNFMHVTTHTSQEWAATFVSELN 571 (942)
Q Consensus 504 Se~~G~~~~l--g------~~gllVnP~D~~~lA~aI~~aL~m---~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~L~ 571 (942)
|+.+|..+.+ + .+|++|+|.|+++++++|.+++.+ .++.++++.+++. .+.+++++.++++++..+
T Consensus 395 s~~gg~~e~v~~~~~~~~~~~G~l~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~~Y~ 471 (473)
T TIGR02095 395 RRTGGLADTVVDGDPEAESGTGFLFEEYDPGALLAALSRALRLYRQDPSLWEALQKNAM--SQDFSWDKSAKQYVELYR 471 (473)
T ss_pred ccCCCccceEecCCCCCCCCceEEeCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHh--ccCCCcHHHHHHHHHHHH
Confidence 9999999888 4 789999999999999999999872 3444555554443 357899998888876554
No 25
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=99.93 E-value=3.2e-24 Score=250.49 Aligned_cols=313 Identities=14% Similarity=0.156 Sum_probs=200.1
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCEEEEcCCchhhHHHHHHhhCCCCeEEEEeccCCCChh--Hhh------------cCC
Q 002285 222 FDAYKRANQMFAKVVNNIYEEGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSSE--IHR------------TLP 287 (942)
Q Consensus 222 w~~Y~~vN~~fa~~i~~~~~~~DiIwvHDyhL~llp~~Lr~~~p~~~I~~flH~PfP~~e--~fr------------~lp 287 (942)
|.....+...+...+.+....+|+||+|+++..++..++++.. +.|++++.|....... +.. .+.
T Consensus 94 ~~~~~~~~~~l~~~~~~~~~~~DvIH~h~~~~~~~~~~~~~~~-~~p~V~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (439)
T TIGR02472 94 WPYLDELADNLLQHLRQQGHLPDLIHAHYADAGYVGARLSRLL-GVPLIFTGHSLGREKRRRLLAAGLKPQQIEKQYNIS 172 (439)
T ss_pred hhhHHHHHHHHHHHHHHcCCCCCEEEEcchhHHHHHHHHHHHh-CCCEEEecccccchhhhhcccCCCChhhhhhhcchH
Confidence 4333444444444443333357999999987666666666544 5788999997432110 000 000
Q ss_pred chHH-HHHHhhhccEEeecCHHHHHHHHHHHHHHhccccCCCceecCC-eeeEEEEeeCccCccccchhcCChhhHHHHH
Q 002285 288 SRTE-LLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQG-RLTRVAAFPIGIDSDRFVRALELPQVQDHIN 365 (942)
Q Consensus 288 ~r~~-il~~ll~aDlIgF~t~~~~~~Fl~~~~r~l~~~~~~~~i~~~g-r~~~v~viP~GID~~~f~~~~~~~~~~~~~~ 365 (942)
.+.. ....+..+|.|...+...+...+. .+.+ ...++.++|||||++.|.+....+.......
T Consensus 173 ~~~~~~~~~~~~ad~ii~~s~~~~~~~~~---------------~~~~~~~~ki~vIpnGvd~~~f~~~~~~~~~~~~~~ 237 (439)
T TIGR02472 173 RRIEAEEETLAHASLVITSTHQEIEEQYA---------------LYDSYQPERMQVIPPGVDLSRFYPPQSSEETSEIDN 237 (439)
T ss_pred HHHHHHHHHHHhCCEEEECCHHHHHHHHH---------------hccCCCccceEEECCCcChhhcCCCCccccchhHHH
Confidence 0000 011233466555444322111100 0111 3467899999999999976432211111111
Q ss_pred HHHHHh--cCCceEEEeecccccCCHHHHHHHHHHhHHhCCCCCCcEEEEEEEcCCCCChhH---HH----HHHHHHHHH
Q 002285 366 ELKERF--AGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPSWRDKVVLIQIAVPTRTDVPE---YQ----KLTSQVHEI 436 (942)
Q Consensus 366 ~lr~~~--~~~~iIl~VgRLd~~KGi~~lL~Af~~ll~~~P~~~~~vvLvqi~~psrgd~~~---y~----~l~~~l~~l 436 (942)
.+++.. +++++|++||||++.||++.+|+||+++.+..+.. ++++ |+ |++++ ++ ++.+++..+
T Consensus 238 ~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~A~~~l~~~~~~~--~l~l--i~----G~g~~~~~l~~~~~~~~~~~~~~ 309 (439)
T TIGR02472 238 LLAPFLKDPEKPPILAISRPDRRKNIPSLVEAYGRSPKLQEMA--NLVL--VL----GCRDDIRKMESQQREVLQKVLLL 309 (439)
T ss_pred HHHhhccccCCcEEEEEcCCcccCCHHHHHHHHHhChhhhhhc--cEEE--Ee----CCccccccccHHHHHHHHHHHHH
Confidence 222211 46789999999999999999999998753221111 2333 33 22221 11 223344555
Q ss_pred HHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHc----cEEEECCCCCCCChhHHHHHhhccCCCceEEEeCCCCcccc
Q 002285 437 VGRINGRYGTLTTVPIHHLDRSLDFHALCALYAIT----DVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQS 512 (942)
Q Consensus 437 v~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~A----Dv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~ 512 (942)
+++++.. + .|. |.+.++.+++.++|+.| |+||+||.+||||++++||||| +.|+|+|+.+|+.+.
T Consensus 310 ~~~~~l~----~--~V~-f~g~~~~~~~~~~~~~a~~~~Dv~v~pS~~E~fg~~~lEAma~----G~PvV~s~~gg~~ei 378 (439)
T TIGR02472 310 IDRYDLY----G--KVA-YPKHHRPDDVPELYRLAARSRGIFVNPALTEPFGLTLLEAAAC----GLPIVATDDGGPRDI 378 (439)
T ss_pred HHHcCCC----c--eEE-ecCCCCHHHHHHHHHHHhhcCCEEecccccCCcccHHHHHHHh----CCCEEEeCCCCcHHH
Confidence 5554321 1 254 56788999999999988 9999999999999999999999 358999999998887
Q ss_pred c--CCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHH-HhcCHHHHHHHHHHHH
Q 002285 513 L--GAGAILVNPWNITEVASSIGYALNMPADEREKRHLHNFMHV-TTHTSQEWAATFVSEL 570 (942)
Q Consensus 513 l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~fl~~L 570 (942)
+ |.+|++|+|.|++++|++|.+++++ +++++++.+++++++ +.|+++.-++++++-|
T Consensus 379 v~~~~~G~lv~~~d~~~la~~i~~ll~~-~~~~~~~~~~a~~~~~~~fsw~~~~~~~~~l~ 438 (439)
T TIGR02472 379 IANCRNGLLVDVLDLEAIASALEDALSD-SSQWQLWSRNGIEGVRRHYSWDAHVEKYLRIL 438 (439)
T ss_pred hcCCCcEEEeCCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 7 5689999999999999999999985 456777778888876 5789999888887654
No 26
>PRK14098 glycogen synthase; Provisional
Probab=99.93 E-value=4.3e-24 Score=251.94 Aligned_cols=323 Identities=14% Similarity=0.187 Sum_probs=216.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhcCCCCEEEEcCCchhhHHHHHHhhC------CCCeEEEEeccCCC----ChhHhh-cC
Q 002285 218 FQSQFDAYKRANQMFAKVVNNIYEEGDVVWCHDYHLMFLPQCLKEYN------NNMKVGWFLHTPFP----SSEIHR-TL 286 (942)
Q Consensus 218 ~~~~w~~Y~~vN~~fa~~i~~~~~~~DiIwvHDyhL~llp~~Lr~~~------p~~~I~~flH~PfP----~~e~fr-~l 286 (942)
|.+....|.-+++..++.+.+.--.+||||+||||-.++|.++++.. .+++++++.|+... +.+.+. .+
T Consensus 117 ~~d~~~rf~~f~~a~l~~~~~~~~~pDiiH~hdw~t~l~~~~l~~~~~~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~ 196 (489)
T PRK14098 117 LKGSAEKVIFFNVGVLETLQRLGWKPDIIHCHDWYAGLVPLLLKTVYADHEFFKDIKTVLTIHNVYRQGVLPFKVFQKLL 196 (489)
T ss_pred CCcHHHHHHHHHHHHHHHHHhcCCCCCEEEecCcHHHHHHHHHHHHhhhccccCCCCEEEEcCCCcccCCCCHHHHHHhC
Confidence 43456677777777777665432367999999999999999998653 37899999998531 111111 12
Q ss_pred Cch------------HHHHHHhhhccEEeecCHHHHHHHHHHHHHHhccccCCCceecCCeeeEEEEeeCccCccccchh
Q 002285 287 PSR------------TELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRA 354 (942)
Q Consensus 287 p~r------------~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~ 354 (942)
|+. .-+-.++..||.|..-++.|++...+....-.|++ + .+..+..++.+||||||++.|.+.
T Consensus 197 ~~~~~~~~~~~~~~~n~lk~~i~~ad~VitVS~~~a~ei~~~~~~~~gl~----~-~l~~~~~kl~~I~NGID~~~~~p~ 271 (489)
T PRK14098 197 PEEVCSGLHREGDEVNMLYTGVEHADLLTTTSPRYAEEIAGDGEEAFGLD----K-VLEERKMRLHGILNGIDTRQWNPS 271 (489)
T ss_pred CHHhhhhhhhcCCcccHHHHHHHhcCcceeeCHHHHHHhCcCCCCCcChH----H-HHHhcCCCeeEEeCCccccccCCc
Confidence 311 11233566788877777777665322000000100 0 011235689999999999998764
Q ss_pred cCCh--------hh---HHHHHHHHHHh-----cCCceEEEeecccccCCHHHHHHHHHHhHHhCCCCCCcEEEEEEEcC
Q 002285 355 LELP--------QV---QDHINELKERF-----AGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPSWRDKVVLIQIAVP 418 (942)
Q Consensus 355 ~~~~--------~~---~~~~~~lr~~~-----~~~~iIl~VgRLd~~KGi~~lL~Af~~ll~~~P~~~~~vvLvqi~~p 418 (942)
.... .. ......+++.+ .+.++|++||||.+.||++.+++|+.++++. + +.|+++|
T Consensus 272 ~d~~~~~~~~~~~~~~k~~~k~~l~~~lgl~~~~~~~~i~~vgRl~~~KG~d~li~a~~~l~~~--~----~~lvivG-- 343 (489)
T PRK14098 272 TDKLIKKRYSIERLDGKLENKKALLEEVGLPFDEETPLVGVIINFDDFQGAELLAESLEKLVEL--D----IQLVICG-- 343 (489)
T ss_pred ccccccccCCcchhhhHHHHHHHHHHHhCCCCccCCCEEEEeccccccCcHHHHHHHHHHHHhc--C----cEEEEEe--
Confidence 3210 00 01123455444 2567999999999999999999999998753 3 4566554
Q ss_pred CCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhccCCC
Q 002285 419 TRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKK 498 (942)
Q Consensus 419 srgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~ 498 (942)
+|+. .+++++++++.+... .|.+ .+.++.+++..+|+.||+||+||.+||||++.+|||+| +
T Consensus 344 ---~G~~--~~~~~l~~l~~~~~~--------~V~~-~g~~~~~~~~~~~a~aDi~l~PS~~E~~Gl~~lEAma~----G 405 (489)
T PRK14098 344 ---SGDK--EYEKRFQDFAEEHPE--------QVSV-QTEFTDAFFHLAIAGLDMLLMPGKIESCGMLQMFAMSY----G 405 (489)
T ss_pred ---CCCH--HHHHHHHHHHHHCCC--------CEEE-EEecCHHHHHHHHHhCCEEEeCCCCCCchHHHHHHHhC----C
Confidence 3432 245667777665421 2544 45688899999999999999999999999999999999 3
Q ss_pred ceEEEeCCCCccccc------CCceEEECCCCHHHHHHHHHHHhCC--CHHHHHHHHHHHhHHHHhcCHHHHHHHHHHHH
Q 002285 499 GVLILSEFAGAAQSL------GAGAILVNPWNITEVASSIGYALNM--PADEREKRHLHNFMHVTTHTSQEWAATFVSEL 570 (942)
Q Consensus 499 G~lIlSe~~G~~~~l------g~~gllVnP~D~~~lA~aI~~aL~m--~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~L 570 (942)
.|+|++..+|..+.+ +.+|++|+|.|+++++++|.+++.. .++.++++.++. ..+.++++.-++++++-.
T Consensus 406 ~ppVv~~~GGl~d~v~~~~~~~~~G~l~~~~d~~~la~ai~~~l~~~~~~~~~~~~~~~~--~~~~fsw~~~a~~y~~lY 483 (489)
T PRK14098 406 TIPVAYAGGGIVETIEEVSEDKGSGFIFHDYTPEALVAKLGEALALYHDEERWEELVLEA--MERDFSWKNSAEEYAQLY 483 (489)
T ss_pred CCeEEecCCCCceeeecCCCCCCceeEeCCCCHHHHHHHHHHHHHHHcCHHHHHHHHHHH--hcCCCChHHHHHHHHHHH
Confidence 479999999988776 3589999999999999999997632 233333333332 236788888888887665
Q ss_pred HHh
Q 002285 571 NDT 573 (942)
Q Consensus 571 ~~~ 573 (942)
+++
T Consensus 484 ~~~ 486 (489)
T PRK14098 484 REL 486 (489)
T ss_pred HHH
Confidence 543
No 27
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=99.93 E-value=9.1e-24 Score=242.11 Aligned_cols=273 Identities=18% Similarity=0.227 Sum_probs=200.6
Q ss_pred CCCCEEEEcCCchhhHHHHHHhhCCCCeEEEEeccCCCChhHhhcCCchHHHHHHhhhccEEeecCHHHHHHHHHHHHHH
Q 002285 241 EEGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSSEIHRTLPSRTELLRSVLAADLVGFHTYDYARHFVSACTRI 320 (942)
Q Consensus 241 ~~~DiIwvHDyhL~llp~~Lr~~~p~~~I~~flH~PfP~~e~fr~lp~r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~ 320 (942)
..+|+||+|+. +.+...++++.|.+++.+.+|..|.. +.+ ..++.|.+.+. +...++.. .
T Consensus 98 ~~~~vi~v~~~--~~~~~~~~~~~~~~~~v~~~h~~~~~-~~~-------------~~~~~ii~~S~-~~~~~~~~---~ 157 (380)
T PRK15484 98 TKDSVIVIHNS--MKLYRQIRERAPQAKLVMHMHNAFEP-ELL-------------DKNAKIIVPSQ-FLKKFYEE---R 157 (380)
T ss_pred CCCcEEEEeCc--HHhHHHHHhhCCCCCEEEEEecccCh-hHh-------------ccCCEEEEcCH-HHHHHHHh---h
Confidence 36899999984 34456677888999999999987631 111 13566666554 33333221 1
Q ss_pred hccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHh---cCCceEEEeecccccCCHHHHHHHHH
Q 002285 321 LGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERF---AGRKVMLGVDRLDMIKGIPQKILAFE 397 (942)
Q Consensus 321 l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIl~VgRLd~~KGi~~lL~Af~ 397 (942)
....++.++|+|||.+.|.+... ..+++++ .++++|+++||+.+.||++.+|+|+.
T Consensus 158 -------------~~~~~i~vIpngvd~~~~~~~~~--------~~~~~~~~~~~~~~~il~~Grl~~~Kg~~~Li~A~~ 216 (380)
T PRK15484 158 -------------LPNADISIVPNGFCLETYQSNPQ--------PNLRQQLNISPDETVLLYAGRISPDKGILLLMQAFE 216 (380)
T ss_pred -------------CCCCCEEEecCCCCHHHcCCcch--------HHHHHHhCCCCCCeEEEEeccCccccCHHHHHHHHH
Confidence 11245789999999988864311 1233333 36788999999999999999999999
Q ss_pred HhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEEC
Q 002285 398 KFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVT 477 (942)
Q Consensus 398 ~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~p 477 (942)
++.+++|++ .|+++|.+...+..+...+.+++.+++.+++. .|+ +.+.++.+++..+|+.||++|+|
T Consensus 217 ~l~~~~p~~----~lvivG~g~~~~~~~~~~~~~~l~~~~~~l~~--------~v~-~~G~~~~~~l~~~~~~aDv~v~p 283 (380)
T PRK15484 217 KLATAHSNL----KLVVVGDPTASSKGEKAAYQKKVLEAAKRIGD--------RCI-MLGGQPPEKMHNYYPLADLVVVP 283 (380)
T ss_pred HHHHhCCCe----EEEEEeCCccccccchhHHHHHHHHHHHhcCC--------cEE-EeCCCCHHHHHHHHHhCCEEEeC
Confidence 999889885 46666643322112234566677777766542 254 45778999999999999999999
Q ss_pred CCC-CCCChhHHHHHhhccCCCceEEEeCCCCccccc--CCceE-EECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHH
Q 002285 478 SLR-DGMNLVSYEFVACQASKKGVLILSEFAGAAQSL--GAGAI-LVNPWNITEVASSIGYALNMPADEREKRHLHNFMH 553 (942)
Q Consensus 478 Sl~-EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l--g~~gl-lVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~ 553 (942)
|.+ ||||++++||||| +.|+|+|..+|..+.+ |.+|+ +++|.|++++|++|.++++++. +.++.++++++
T Consensus 284 S~~~E~f~~~~lEAma~----G~PVI~s~~gg~~Eiv~~~~~G~~l~~~~d~~~la~~I~~ll~d~~--~~~~~~~ar~~ 357 (380)
T PRK15484 284 SQVEEAFCMVAVEAMAA----GKPVLASTKGGITEFVLEGITGYHLAEPMTSDSIISDINRTLADPE--LTQIAEQAKDF 357 (380)
T ss_pred CCCccccccHHHHHHHc----CCCEEEeCCCCcHhhcccCCceEEEeCCCCHHHHHHHHHHHHcCHH--HHHHHHHHHHH
Confidence 985 9999999999999 3578899988888877 66787 6789999999999999998763 45566777766
Q ss_pred H-HhcCHHHHHHHHHHHHHHh
Q 002285 554 V-TTHTSQEWAATFVSELNDT 573 (942)
Q Consensus 554 v-~~~~~~~W~~~fl~~L~~~ 573 (942)
+ ++|+++..++++++.|+..
T Consensus 358 ~~~~fsw~~~a~~~~~~l~~~ 378 (380)
T PRK15484 358 VFSKYSWEGVTQRFEEQIHNW 378 (380)
T ss_pred HHHhCCHHHHHHHHHHHHHHh
Confidence 4 7899999999999888653
No 28
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=99.93 E-value=7.7e-24 Score=244.74 Aligned_cols=276 Identities=18% Similarity=0.116 Sum_probs=200.4
Q ss_pred CCCEEEEcCCchhhHHHHHHhhC-CCCeEEEEeccCCCC-hhHhhcCCchHHHHHHhhhccEEeecCHHHHHHHHHHHHH
Q 002285 242 EGDVVWCHDYHLMFLPQCLKEYN-NNMKVGWFLHTPFPS-SEIHRTLPSRTELLRSVLAADLVGFHTYDYARHFVSACTR 319 (942)
Q Consensus 242 ~~DiIwvHDyhL~llp~~Lr~~~-p~~~I~~flH~PfP~-~e~fr~lp~r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r 319 (942)
+.|+||+|..+.-.+..++++.. ...++.+++|.+-.. ..+.. ..+..+..-+..+|.|...+....+.+.+
T Consensus 118 ~~diihaH~~~~~~~~~~~~~~~~~~~~~~~t~Hg~d~~~~~~~~--~~~~~~~~~~~~ad~vv~~S~~~~~~l~~---- 191 (406)
T PRK15427 118 VADVFIAHFGPAGVTAAKLRELGVLRGKIATIFHGIDISSREVLN--HYTPEYQQLFRRGDLMLPISDLWAGRLQK---- 191 (406)
T ss_pred CCCEEEEcCChHHHHHHHHHHhCCCCCCeEEEEcccccccchhhh--hhhHHHHHHHHhCCEEEECCHHHHHHHHH----
Confidence 67999999887766677776632 234556788864211 11110 01112233344688887766544333221
Q ss_pred HhccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHhcCCceEEEeecccccCCHHHHHHHHHHh
Q 002285 320 ILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKF 399 (942)
Q Consensus 320 ~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi~~lL~Af~~l 399 (942)
++....++.++|+|||.+.|.+.... ...+...|++|||+.+.||++.+|+|++.+
T Consensus 192 ------------~g~~~~ki~vi~nGvd~~~f~~~~~~------------~~~~~~~il~vGrl~~~Kg~~~ll~a~~~l 247 (406)
T PRK15427 192 ------------MGCPPEKIAVSRMGVDMTRFSPRPVK------------APATPLEIISVARLTEKKGLHVAIEACRQL 247 (406)
T ss_pred ------------cCCCHHHEEEcCCCCCHHHcCCCccc------------cCCCCeEEEEEeCcchhcCHHHHHHHHHHH
Confidence 11234578899999999988643210 123456799999999999999999999999
Q ss_pred HHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEECCC
Q 002285 400 LEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVTSL 479 (942)
Q Consensus 400 l~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~pSl 479 (942)
.+++|+++ |+++ |+|+.. +++++++.+.+.. ..+.+.|.++.+++..+|+.||+||+||.
T Consensus 248 ~~~~~~~~----l~iv-----G~G~~~----~~l~~~~~~~~l~-------~~V~~~G~~~~~el~~~l~~aDv~v~pS~ 307 (406)
T PRK15427 248 KEQGVAFR----YRIL-----GIGPWE----RRLRTLIEQYQLE-------DVVEMPGFKPSHEVKAMLDDADVFLLPSV 307 (406)
T ss_pred HhhCCCEE----EEEE-----ECchhH----HHHHHHHHHcCCC-------CeEEEeCCCCHHHHHHHHHhCCEEEECCc
Confidence 88888754 4444 566643 4455555544321 23345789999999999999999999998
Q ss_pred C------CCCChhHHHHHhhccCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHh
Q 002285 480 R------DGMNLVSYEFVACQASKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVASSIGYALNMPADEREKRHLHNF 551 (942)
Q Consensus 480 ~------EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~ 551 (942)
. ||+|++++||||| +.|+|+|+.+|+.+.+ |.+|++|+|.|++++|++|.+++++++++++++.++++
T Consensus 308 ~~~~g~~Eg~p~~llEAma~----G~PVI~t~~~g~~E~v~~~~~G~lv~~~d~~~la~ai~~l~~~d~~~~~~~~~~ar 383 (406)
T PRK15427 308 TGADGDMEGIPVALMEAMAV----GIPVVSTLHSGIPELVEADKSGWLVPENDAQALAQRLAAFSQLDTDELAPVVKRAR 383 (406)
T ss_pred cCCCCCccCccHHHHHHHhC----CCCEEEeCCCCchhhhcCCCceEEeCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 4 9999999999999 3579999999988887 67899999999999999999999977778888888888
Q ss_pred HHH-HhcCHHHHHHHHHHHHH
Q 002285 552 MHV-TTHTSQEWAATFVSELN 571 (942)
Q Consensus 552 ~~v-~~~~~~~W~~~fl~~L~ 571 (942)
+++ ..|+++..++++.+-+.
T Consensus 384 ~~v~~~f~~~~~~~~l~~~~~ 404 (406)
T PRK15427 384 EKVETDFNQQVINRELASLLQ 404 (406)
T ss_pred HHHHHhcCHHHHHHHHHHHHh
Confidence 887 66899999988877664
No 29
>PRK14099 glycogen synthase; Provisional
Probab=99.92 E-value=4.6e-23 Score=242.93 Aligned_cols=316 Identities=18% Similarity=0.207 Sum_probs=203.1
Q ss_pred HHHHHHHHHHHHHHHHHHhh--cCCCCEEEEcCCchhhHHHHHHhh-CCCCeEEEEeccC-----CCChhHhhc--CCch
Q 002285 220 SQFDAYKRANQMFAKVVNNI--YEEGDVVWCHDYHLMFLPQCLKEY-NNNMKVGWFLHTP-----FPSSEIHRT--LPSR 289 (942)
Q Consensus 220 ~~w~~Y~~vN~~fa~~i~~~--~~~~DiIwvHDyhL~llp~~Lr~~-~p~~~I~~flH~P-----fP~~e~fr~--lp~r 289 (942)
+....|.-++++-.+.+... -.++||||+||||-.++|.+++.. ..+++++++.|.. ||. ..+.. +|+.
T Consensus 109 d~~~rf~~f~~a~~~~~~~~~~~~~pDIiH~Hdw~~~l~~~~l~~~~~~~~~~V~TiHn~~~qg~~~~-~~~~~~~~~~~ 187 (485)
T PRK14099 109 DNAQRFAALARAAAAIGQGLVPGFVPDIVHAHDWQAGLAPAYLHYSGRPAPGTVFTIHNLAFQGQFPR-ELLGALGLPPS 187 (485)
T ss_pred cHHHHHHHHHHHHHHHHhhhccCCCCCEEEECCcHHHHHHHHHHhCCCCCCCEEEeCCCCCCCCcCCH-HHHHHcCCChH
Confidence 33445554444444333222 126799999999999999988743 3467899999974 221 11111 1110
Q ss_pred -------------HHHHHHhhhccEEeecCHHHHHHHHHHHHHHhccccCCCcee--cCCeeeEEEEeeCccCccccchh
Q 002285 290 -------------TELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVE--DQGRLTRVAAFPIGIDSDRFVRA 354 (942)
Q Consensus 290 -------------~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~l~~~~~~~~i~--~~gr~~~v~viP~GID~~~f~~~ 354 (942)
.-+-.++..||.|.--+..|++...+.. .| .++. +..+..++.+||||||++.|.+.
T Consensus 188 ~~~~~~~~~~~~~~~~k~~i~~ad~vitVS~~~a~ei~~~~---~g-----~gl~~~l~~~~~ki~vI~NGID~~~f~p~ 259 (485)
T PRK14099 188 AFSLDGVEYYGGIGYLKAGLQLADRITTVSPTYALEIQGPE---AG-----MGLDGLLRQRADRLSGILNGIDTAVWNPA 259 (485)
T ss_pred HcCchhhhhCCCccHHHHHHHhcCeeeecChhHHHHHhccc---CC-----cChHHHHHhhCCCeEEEecCCchhhcccc
Confidence 0123344556666555555544332100 00 0010 11235689999999999998765
Q ss_pred cCCh-------h-h---HHHHHHHHHHhc-----CCceEEEeecccccCCHHHHHHHHHHhHHhCCCCCCcEEEEEEEcC
Q 002285 355 LELP-------Q-V---QDHINELKERFA-----GRKVMLGVDRLDMIKGIPQKILAFEKFLEENPSWRDKVVLIQIAVP 418 (942)
Q Consensus 355 ~~~~-------~-~---~~~~~~lr~~~~-----~~~iIl~VgRLd~~KGi~~lL~Af~~ll~~~P~~~~~vvLvqi~~p 418 (942)
.... + . ......++++++ +.++|++||||.+.||++.+|+|+.++++. + +.|+++|
T Consensus 260 ~~~~~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~~li~~VgRL~~~KG~d~Li~A~~~l~~~--~----~~lvivG-- 331 (485)
T PRK14099 260 TDELIAATYDVETLAARAANKAALQARFGLDPDPDALLLGVISRLSWQKGLDLLLEALPTLLGE--G----AQLALLG-- 331 (485)
T ss_pred ccchhhhcCChhHHHhHHHhHHHHHHHcCCCcccCCcEEEEEecCCccccHHHHHHHHHHHHhc--C----cEEEEEe--
Confidence 3210 0 0 011234556552 356888999999999999999999998753 3 3455553
Q ss_pred CCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHH-HHccEEEECCCCCCCChhHHHHHhhccCC
Q 002285 419 TRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALY-AITDVALVTSLRDGMNLVSYEFVACQASK 497 (942)
Q Consensus 419 srgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly-~~ADv~v~pSl~EG~~Lv~lEamA~~~~~ 497 (942)
+|+. .+++++++++.+... .+.++.+. .+++..+| +.||+||+||.+||||++.+|||+|
T Consensus 332 ---~G~~--~~~~~l~~l~~~~~~--------~v~~~~G~--~~~l~~~~~a~aDifv~PS~~E~fGl~~lEAma~---- 392 (485)
T PRK14099 332 ---SGDA--ELEARFRAAAQAYPG--------QIGVVIGY--DEALAHLIQAGADALLVPSRFEPCGLTQLCALRY---- 392 (485)
T ss_pred ---cCCH--HHHHHHHHHHHHCCC--------CEEEEeCC--CHHHHHHHHhcCCEEEECCccCCCcHHHHHHHHC----
Confidence 3331 245566666654321 13334454 57888877 4699999999999999999999999
Q ss_pred CceEEEeCCCCccccc--C---------CceEEECCCCHHHHHHHHHHH---hCCCHHHHHHHHHHHhHHHHhcCHHHHH
Q 002285 498 KGVLILSEFAGAAQSL--G---------AGAILVNPWNITEVASSIGYA---LNMPADEREKRHLHNFMHVTTHTSQEWA 563 (942)
Q Consensus 498 ~G~lIlSe~~G~~~~l--g---------~~gllVnP~D~~~lA~aI~~a---L~m~~~er~~r~~~~~~~v~~~~~~~W~ 563 (942)
+.++|+|..+|..+.+ + .+|++|+|.|+++++++|.++ ++ .++.++++.++++ .+.++++.-+
T Consensus 393 G~ppVvs~~GGl~d~V~~~~~~~~~~~~~~G~l~~~~d~~~La~ai~~a~~l~~-d~~~~~~l~~~~~--~~~fSw~~~a 469 (485)
T PRK14099 393 GAVPVVARVGGLADTVVDANEMAIATGVATGVQFSPVTADALAAALRKTAALFA-DPVAWRRLQRNGM--TTDVSWRNPA 469 (485)
T ss_pred CCCcEEeCCCCccceeecccccccccCCCceEEeCCCCHHHHHHHHHHHHHHhc-CHHHHHHHHHHhh--hhcCChHHHH
Confidence 2478889999988877 2 479999999999999999984 44 3445555555544 4679999989
Q ss_pred HHHHHHHHHhH
Q 002285 564 ATFVSELNDTI 574 (942)
Q Consensus 564 ~~fl~~L~~~~ 574 (942)
+++++...++.
T Consensus 470 ~~y~~lY~~l~ 480 (485)
T PRK14099 470 QHYAALYRSLV 480 (485)
T ss_pred HHHHHHHHHHH
Confidence 88877666553
No 30
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=99.92 E-value=9.6e-23 Score=234.62 Aligned_cols=290 Identities=18% Similarity=0.192 Sum_probs=209.6
Q ss_pred CCCCEEEEcCCchhhHHHHHHhhCCCCeEEEEeccCCCChhHhh---cCCc--hHHHH--HHhhhccEEeecCHHHHHHH
Q 002285 241 EEGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSSEIHR---TLPS--RTELL--RSVLAADLVGFHTYDYARHF 313 (942)
Q Consensus 241 ~~~DiIwvHDyhL~llp~~Lr~~~p~~~I~~flH~PfP~~e~fr---~lp~--r~~il--~~ll~aDlIgF~t~~~~~~F 313 (942)
..+|+||+|++....++.++++. .++++++++|..+.-...+. ..+. ...++ ..+..+|.|.+.+...++.+
T Consensus 100 ~~~Diih~h~~~~~~~~~~~~~~-~~~p~v~t~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~d~vi~~s~~~~~~~ 178 (405)
T TIGR03449 100 GYYDLIHSHYWLSGQVGWLLRDR-WGVPLVHTAHTLAAVKNAALADGDTPEPEARRIGEQQLVDNADRLIANTDEEARDL 178 (405)
T ss_pred CCCCeEEechHHHHHHHHHHHHh-cCCCEEEeccchHHHHHHhccCCCCCchHHHHHHHHHHHHhcCeEEECCHHHHHHH
Confidence 36899999986655555555543 36788999997532111110 0111 11222 23446899999888777665
Q ss_pred HHHHHHHhccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHh---cCCceEEEeecccccCCHH
Q 002285 314 VSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERF---AGRKVMLGVDRLDMIKGIP 390 (942)
Q Consensus 314 l~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIl~VgRLd~~KGi~ 390 (942)
... . +....++.++|+|||.+.|.+.. ....++++ .++++|+++||+.+.||+.
T Consensus 179 ~~~----~-----------~~~~~ki~vi~ngvd~~~~~~~~--------~~~~~~~~~~~~~~~~i~~~G~l~~~K~~~ 235 (405)
T TIGR03449 179 VRH----Y-----------DADPDRIDVVAPGADLERFRPGD--------RATERARLGLPLDTKVVAFVGRIQPLKAPD 235 (405)
T ss_pred HHH----c-----------CCChhhEEEECCCcCHHHcCCCc--------HHHHHHhcCCCCCCcEEEEecCCCcccCHH
Confidence 431 1 12245788999999998886431 11123344 3678999999999999999
Q ss_pred HHHHHHHHhHHhCCCCCCcEEEEEEEcCCCCCh-hHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHH
Q 002285 391 QKILAFEKFLEENPSWRDKVVLIQIAVPTRTDV-PEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYA 469 (942)
Q Consensus 391 ~lL~Af~~ll~~~P~~~~~vvLvqi~~psrgd~-~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~ 469 (942)
.+++|++++++++|+. ++.|+++|.+. +++ +.. +++++++.+.+.. ..|. +.+.++.+++..+|+
T Consensus 236 ~li~a~~~l~~~~~~~--~~~l~ivG~~~-~~g~~~~----~~l~~~~~~~~l~------~~v~-~~g~~~~~~~~~~l~ 301 (405)
T TIGR03449 236 VLLRAVAELLDRDPDR--NLRVIVVGGPS-GSGLATP----DALIELAAELGIA------DRVR-FLPPRPPEELVHVYR 301 (405)
T ss_pred HHHHHHHHHHhhCCCc--ceEEEEEeCCC-CCcchHH----HHHHHHHHHcCCC------ceEE-ECCCCCHHHHHHHHH
Confidence 9999999999988874 37788777543 233 332 3445555544321 1255 467899999999999
Q ss_pred HccEEEECCCCCCCChhHHHHHhhccCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHH
Q 002285 470 ITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVASSIGYALNMPADEREKRH 547 (942)
Q Consensus 470 ~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~ 547 (942)
.||++++||..||||++++|||+| +.|+|+|+.+|..+.+ +.+|++++|.|+++++++|.+++++ ++.+.++.
T Consensus 302 ~ad~~v~ps~~E~~g~~~lEAma~----G~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~la~~i~~~l~~-~~~~~~~~ 376 (405)
T TIGR03449 302 AADVVAVPSYNESFGLVAMEAQAC----GTPVVAARVGGLPVAVADGETGLLVDGHDPADWADALARLLDD-PRTRIRMG 376 (405)
T ss_pred hCCEEEECCCCCCcChHHHHHHHc----CCCEEEecCCCcHhhhccCCceEECCCCCHHHHHHHHHHHHhC-HHHHHHHH
Confidence 999999999999999999999999 3578888988888777 5789999999999999999999975 45666777
Q ss_pred HHHhHHHHhcCHHHHHHHHHHHHHHh
Q 002285 548 LHNFMHVTTHTSQEWAATFVSELNDT 573 (942)
Q Consensus 548 ~~~~~~v~~~~~~~W~~~fl~~L~~~ 573 (942)
.++++.++.++++..++++++-+.++
T Consensus 377 ~~~~~~~~~fsw~~~~~~~~~~y~~~ 402 (405)
T TIGR03449 377 AAAVEHAAGFSWAATADGLLSSYRDA 402 (405)
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 77788888999999999988776654
No 31
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=99.92 E-value=1e-22 Score=239.84 Aligned_cols=313 Identities=20% Similarity=0.230 Sum_probs=210.4
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCEEEEcCCchhhHHHHHHhhC-----CCCeEEEEeccCCCCh----hHhhc--CCc--
Q 002285 222 FDAYKRANQMFAKVVNNIYEEGDVVWCHDYHLMFLPQCLKEYN-----NNMKVGWFLHTPFPSS----EIHRT--LPS-- 288 (942)
Q Consensus 222 w~~Y~~vN~~fa~~i~~~~~~~DiIwvHDyhL~llp~~Lr~~~-----p~~~I~~flH~PfP~~----e~fr~--lp~-- 288 (942)
...|..+++...+.+.+.-..+|+||+||+|-.+++.+++... .+++++++.|.+.+.. ..+.. +++
T Consensus 109 ~~~~~~f~~~~~~~l~~~~~~pDviH~hd~~t~~~~~~l~~~~~~~~~~~~~~v~tiH~~~~~g~~~~~~~~~~~~~~~~ 188 (476)
T cd03791 109 AERFALFSRAALELLRRLGWKPDIIHCHDWHTGLVPALLKEKYADPFFKNIKTVFTIHNLAYQGVFPLEALEDLGLPWEE 188 (476)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCcEEEECchHHHHHHHHHHHhhccccCCCCCEEEEeCCCCCCCCCCHHHHHHcCCCccc
Confidence 4445555566656555544578999999999999999998764 5789999999874321 11111 111
Q ss_pred ------------hHHHHHHhhhccEEeecCHHHHHHHHHHHHHHhccccCCCcee--cCCeeeEEEEeeCccCccccchh
Q 002285 289 ------------RTELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVE--DQGRLTRVAAFPIGIDSDRFVRA 354 (942)
Q Consensus 289 ------------r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~l~~~~~~~~i~--~~gr~~~v~viP~GID~~~f~~~ 354 (942)
..-+..++..||.|...+..+++...+.. . ..++. ...+..++.++|||||.+.|.+.
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~ad~v~~vS~~~~~~i~~~~-------~-~~gl~~~~~~~~~ki~~I~NGid~~~~~p~ 260 (476)
T cd03791 189 LFHIDGLEFYGQVNFLKAGIVYADAVTTVSPTYAREILTPE-------F-GEGLDGLLRARAGKLSGILNGIDYDVWNPA 260 (476)
T ss_pred hhhhcccccCCcccHHHHHHHhcCcCeecCHhHHHHhCCCC-------C-CcchHHHHHhccCCeEEEeCCCcCcccCcc
Confidence 01222345566776666655555433200 0 00110 11234689999999999998764
Q ss_pred cCChh-----------hHHHHHHHHHHh-----cCCceEEEeecccccCCHHHHHHHHHHhHHhCCCCCCcEEEEEEEcC
Q 002285 355 LELPQ-----------VQDHINELKERF-----AGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPSWRDKVVLIQIAVP 418 (942)
Q Consensus 355 ~~~~~-----------~~~~~~~lr~~~-----~~~~iIl~VgRLd~~KGi~~lL~Af~~ll~~~P~~~~~vvLvqi~~p 418 (942)
..... .......+++++ .++++|+++||+.+.||++.+++|++++.++. +.|+++|
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~k~~l~~~~g~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~------~~lvi~G-- 332 (476)
T cd03791 261 TDPHLPANYSADDLEGKAENKAALQEELGLPVDPDAPLFGFVGRLTEQKGIDLLLEALPELLELG------GQLVILG-- 332 (476)
T ss_pred ccchhhhcCCccccccHHHHHHHHHHHcCCCcCCCCCEEEEEeeccccccHHHHHHHHHHHHHcC------cEEEEEe--
Confidence 32110 112234456555 36789999999999999999999999987653 3455554
Q ss_pred CCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhccCCC
Q 002285 419 TRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKK 498 (942)
Q Consensus 419 srgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~ 498 (942)
+++. .+++++.+++.+... .|+++.+ .+.+++..+|+.||++|+||.+||||++.+|||+| +
T Consensus 333 ---~g~~--~~~~~~~~~~~~~~~--------~v~~~~~-~~~~~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~----G 394 (476)
T cd03791 333 ---SGDP--EYEEALRELAARYPG--------RVAVLIG-YDEALAHLIYAGADFFLMPSRFEPCGLTQMYAMRY----G 394 (476)
T ss_pred ---cCCH--HHHHHHHHHHHhCCC--------cEEEEEe-CCHHHHHHHHHhCCEEECCCCCCCCcHHHHHHhhC----C
Confidence 3321 245566666554311 2555544 45778889999999999999999999999999999 3
Q ss_pred ceEEEeCCCCccccc--CC------ceEEECCCCHHHHHHHHHHHhCC--CHHHHHHHHHHHhHHHHhcCHHHHHHHHHH
Q 002285 499 GVLILSEFAGAAQSL--GA------GAILVNPWNITEVASSIGYALNM--PADEREKRHLHNFMHVTTHTSQEWAATFVS 568 (942)
Q Consensus 499 G~lIlSe~~G~~~~l--g~------~gllVnP~D~~~lA~aI~~aL~m--~~~er~~r~~~~~~~v~~~~~~~W~~~fl~ 568 (942)
.|+|+|+.+|..+.+ +. +|++|+|.|+++++++|.+++++ .++++.++.+++++ ..++++.-++++++
T Consensus 395 ~pvI~~~~gg~~e~v~~~~~~~~~~~G~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~~~~~~--~~fsw~~~a~~~~~ 472 (476)
T cd03791 395 TVPIVRATGGLADTVIDYNEDTGEGTGFVFEGYNADALLAALRRALALYRDPEAWRKLQRNAMA--QDFSWDRSAKEYLE 472 (476)
T ss_pred CCCEECcCCCccceEeCCcCCCCCCCeEEeCCCCHHHHHHHHHHHHHHHcCHHHHHHHHHHHhc--cCCChHHHHHHHHH
Confidence 579999999999888 44 89999999999999999999863 23444444444433 35788888887766
Q ss_pred HH
Q 002285 569 EL 570 (942)
Q Consensus 569 ~L 570 (942)
..
T Consensus 473 ~y 474 (476)
T cd03791 473 LY 474 (476)
T ss_pred HH
Confidence 44
No 32
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=99.91 E-value=4.2e-22 Score=240.68 Aligned_cols=332 Identities=13% Similarity=0.144 Sum_probs=210.0
Q ss_pred HHHHHHHHHHHHHHHHhhc-CCCCEEEEcCCchhhHHHHHHhhCCCCeEEEEeccCCC----Chh-HhhcCCchHH----
Q 002285 222 FDAYKRANQMFAKVVNNIY-EEGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFP----SSE-IHRTLPSRTE---- 291 (942)
Q Consensus 222 w~~Y~~vN~~fa~~i~~~~-~~~DiIwvHDyhL~llp~~Lr~~~p~~~I~~flH~PfP----~~e-~fr~lp~r~~---- 291 (942)
|.....+....++.+.... ..+|+||.|.+.--+++..++++. +++.+++.|..=. ... .+..+..+..
T Consensus 364 ~p~l~~f~~~~~~~~~~~~~~~pDlIHahy~d~glva~lla~~l-gVP~v~t~HsL~~~K~~~~g~~~~~~e~~~~~~~r 442 (784)
T TIGR02470 364 WPYLETFAEDAEKEILAELQGKPDLIIGNYSDGNLVASLLARKL-GVTQCTIAHALEKTKYPDSDIYWQEFEDKYHFSCQ 442 (784)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCEEEECCCchHHHHHHHHHhc-CCCEEEECCcchhhcccccccccccchhHHHhhhh
Confidence 5555555566666554433 368999999876667777776665 6787777785311 000 0111100000
Q ss_pred ---HHHHhhhccEEeecCHHHHHHHHHHHH-----HHhccc---cCCCceecCCeeeEEEEeeCccCccccchhcCChhh
Q 002285 292 ---LLRSVLAADLVGFHTYDYARHFVSACT-----RILGLE---GTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQV 360 (942)
Q Consensus 292 ---il~~ll~aDlIgF~t~~~~~~Fl~~~~-----r~l~~~---~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~ 360 (942)
-+..|..||.|.-.++.-...-...+. ..+... ..-.++.. ...++.++|+|||++.|.+......-
T Consensus 443 ~~ae~~~~~~AD~IItsT~qEi~~~~~~v~qY~s~~~ft~p~Ly~vvnGid~--~~~Ki~VVpPGVD~~iF~P~~~~~~r 520 (784)
T TIGR02470 443 FTADLIAMNAADFIITSTYQEIAGTKDSVGQYESHQAFTMPGLYRVVHGIDV--FDPKFNIVSPGADESIYFPYSDKEKR 520 (784)
T ss_pred hhHHHHHHhcCCEEEECcHHHhhhhhhhhhhhhhcccccccceeeeecCccC--CcCCeEEECCCcChhhcCCCCchhhh
Confidence 124566789988777532111011110 001100 00012221 23488999999999999764321110
Q ss_pred -HHHH----------HHHHHHh-----cCCceEEEeecccccCCHHHHHHHHHHhHHhCCCCCCcEEEEEEEcCCCC---
Q 002285 361 -QDHI----------NELKERF-----AGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPSWRDKVVLIQIAVPTRT--- 421 (942)
Q Consensus 361 -~~~~----------~~lr~~~-----~~~~iIl~VgRLd~~KGi~~lL~Af~~ll~~~P~~~~~vvLvqi~~psrg--- 421 (942)
.... ...++.+ .++++|++||||++.||+..+++||.++.+..++ +.|++||.+...
T Consensus 521 ~~~~~~~ie~ll~~~~~~~~~~G~l~d~~kpiIl~VGRL~~~KGid~LIeA~~~l~~l~~~----~~LVIVGGg~~~~~s 596 (784)
T TIGR02470 521 LTNLHPEIEELLFSLEDNDEHYGYLKDPNKPIIFSMARLDRVKNLTGLVECYGRSPKLREL----VNLVVVAGKLDAKES 596 (784)
T ss_pred hhhhhcchhhhccchhhHHHHhCCCCCCCCcEEEEEeCCCccCCHHHHHHHHHHhHhhCCC----eEEEEEeCCcccccc
Confidence 0000 0112222 3678999999999999999999999886443333 567777754211
Q ss_pred ChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHH----HccEEEECCCCCCCChhHHHHHhhccCC
Q 002285 422 DVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYA----ITDVALVTSLRDGMNLVSYEFVACQASK 497 (942)
Q Consensus 422 d~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~----~ADv~v~pSl~EG~~Lv~lEamA~~~~~ 497 (942)
...+..+..+++.+++.+.+.. + .|.|++...+..++..+|+ .+||||+||.+||||||++|||||
T Consensus 597 ~d~ee~~~i~~L~~la~~~gL~----g--~V~flG~~~~~~~~~elyr~iAd~adVfV~PS~~EpFGLvvLEAMAc---- 666 (784)
T TIGR02470 597 KDREEQAEIEKMHNLIDQYQLH----G--QIRWIGAQLNRVRNGELYRYIADTKGIFVQPALYEAFGLTVLEAMTC---- 666 (784)
T ss_pred cchhHHHHHHHHHHHHHHhCCC----C--eEEEccCcCCcccHHHHHHHhhccCcEEEECCcccCCCHHHHHHHHc----
Confidence 1112223445666777665422 1 3665543345666667776 247999999999999999999999
Q ss_pred CceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHhC---CCHHHHHHHHHHHhHHH-HhcCHHHHHHHHHHHH
Q 002285 498 KGVLILSEFAGAAQSL--GAGAILVNPWNITEVASSIGYALN---MPADEREKRHLHNFMHV-TTHTSQEWAATFVSEL 570 (942)
Q Consensus 498 ~G~lIlSe~~G~~~~l--g~~gllVnP~D~~~lA~aI~~aL~---m~~~er~~r~~~~~~~v-~~~~~~~W~~~fl~~L 570 (942)
+.|+|+|+.+|..+.+ |.+|++|+|.|++++|++|.++++ ..++.+.++.+++++++ +.|+++..+++++..+
T Consensus 667 GlPVVAT~~GG~~EiV~dg~tGfLVdp~D~eaLA~aL~~ll~kll~dp~~~~~ms~~a~~rV~~~FSW~~~A~~ll~l~ 745 (784)
T TIGR02470 667 GLPTFATRFGGPLEIIQDGVSGFHIDPYHGEEAAEKIVDFFEKCDEDPSYWQKISQGGLQRIYEKYTWKIYSERLLTLA 745 (784)
T ss_pred CCCEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 3589999999999988 789999999999999999999873 34566777777778876 6799999999887654
No 33
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=99.91 E-value=7.6e-23 Score=235.40 Aligned_cols=281 Identities=17% Similarity=0.202 Sum_probs=192.7
Q ss_pred CCCEEEEcCCchhhHHHHHHhhCCCCeEEEEeccCCCC--hhH-hh-cCCch--------HH---HHHHhhhccEEeecC
Q 002285 242 EGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPS--SEI-HR-TLPSR--------TE---LLRSVLAADLVGFHT 306 (942)
Q Consensus 242 ~~DiIwvHDyhL~llp~~Lr~~~p~~~I~~flH~PfP~--~e~-fr-~lp~r--------~~---il~~ll~aDlIgF~t 306 (942)
.+|+|+.|. .+....++++..|+++++.++|..+-. .+. |. ..+.+ .. ....+..+|.|...+
T Consensus 87 ~pdvi~~h~--~~~~~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~s 164 (396)
T cd03818 87 RPDVIVAHP--GWGETLFLKDVWPDAPLIGYFEFYYRAEGADVGFDPEFPPSLDDALRLRNRNALILLALAQADAGVSPT 164 (396)
T ss_pred CCCEEEECC--ccchhhhHHHhCCCCCEEEEEeeeecCCCCCCCCCCCCCCchhHHHHHHHhhhHhHHHHHhCCEEECCC
Confidence 579999995 445566788889998888766543311 110 10 11111 11 223455677777665
Q ss_pred HHHHHHHHHHHHHHhccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHh---cCCceEEEeec-
Q 002285 307 YDYARHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERF---AGRKVMLGVDR- 382 (942)
Q Consensus 307 ~~~~~~Fl~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIl~VgR- 382 (942)
......|.. .+ ..++.++|+|||.+.|.+.... ...++... .++++|+++||
T Consensus 165 ~~~~~~~~~---------------~~---~~ki~vI~ngvd~~~f~~~~~~------~~~~~~~~~~~~~~~~i~~vgR~ 220 (396)
T cd03818 165 RWQRSTFPA---------------EL---RSRISVIHDGIDTDRLRPDPQA------RLRLPNGRVLTPGDEVITFVARN 220 (396)
T ss_pred HHHHhhCcH---------------hh---ccceEEeCCCccccccCCCchh------hhcccccccCCCCCeEEEEECCC
Confidence 443332211 01 2478899999999998764211 01111111 46788999998
Q ss_pred ccccCCHHHHHHHHHHhHHhCCCCCCcEEEEEEEcCCC--C----ChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeC
Q 002285 383 LDMIKGIPQKILAFEKFLEENPSWRDKVVLIQIAVPTR--T----DVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLD 456 (942)
Q Consensus 383 Ld~~KGi~~lL~Af~~ll~~~P~~~~~vvLvqi~~psr--g----d~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~ 456 (942)
+.+.||++.+|+|+..+.+.+|+++ |+++|.... + +++. ++++ +..+++.+.. ...|+ |.
T Consensus 221 l~~~Kg~~~ll~a~~~l~~~~~~~~----lvivG~~~~~~g~~~~~~~~---~~~~---~~~~~~~~~~---~~~V~-f~ 286 (396)
T cd03818 221 LEPYRGFHVFMRALPRLLRARPDAR----VVIVGGDGVSYGAPPPDGES---WKQH---MLDELGGRLD---LSRVH-FL 286 (396)
T ss_pred cccccCHHHHHHHHHHHHHHCCCcE----EEEEcCCCcccCCCCCCccc---HHHH---HHHHhhcccC---cceEE-Ee
Confidence 9999999999999999998888865 565553211 0 1111 1222 2222221111 12355 46
Q ss_pred CCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhccCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHH
Q 002285 457 RSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVASSIGY 534 (942)
Q Consensus 457 ~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l--g~~gllVnP~D~~~lA~aI~~ 534 (942)
|.++.+++.++|+.||++++||..||+|++++||||| +.|+|+|+.+|..+.+ |.+|++|+|.|++++|++|.+
T Consensus 287 G~v~~~~~~~~l~~adv~v~~s~~e~~~~~llEAmA~----G~PVIas~~~g~~e~i~~~~~G~lv~~~d~~~la~~i~~ 362 (396)
T cd03818 287 GRVPYDQYLALLQVSDVHVYLTYPFVLSWSLLEAMAC----GCLVVGSDTAPVREVITDGENGLLVDFFDPDALAAAVIE 362 (396)
T ss_pred CCCCHHHHHHHHHhCcEEEEcCcccccchHHHHHHHC----CCCEEEcCCCCchhhcccCCceEEcCCCCHHHHHHHHHH
Confidence 8899999999999999999999999999999999999 3579999988888887 578999999999999999999
Q ss_pred HhCCCHHHHHHHHHHHhHHHHh-cCHHHHHHHHH
Q 002285 535 ALNMPADEREKRHLHNFMHVTT-HTSQEWAATFV 567 (942)
Q Consensus 535 aL~m~~~er~~r~~~~~~~v~~-~~~~~W~~~fl 567 (942)
+++++ +++.++.+++++++.+ ++++..+++++
T Consensus 363 ll~~~-~~~~~l~~~ar~~~~~~fs~~~~~~~~~ 395 (396)
T cd03818 363 LLDDP-ARRARLRRAARRTALRYDLLSVCLPRQL 395 (396)
T ss_pred HHhCH-HHHHHHHHHHHHHHHHhccHHHHHHHHh
Confidence 99864 5777788888988876 88777777665
No 34
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.91 E-value=2.2e-22 Score=237.35 Aligned_cols=283 Identities=18% Similarity=0.138 Sum_probs=196.4
Q ss_pred HHHhhcCCCCEEEEcCCchhhHHHHHHhhCCCCeEEEEeccCCCCh---hHhhc---CCchHH--------HHH-Hhhhc
Q 002285 235 VVNNIYEEGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSS---EIHRT---LPSRTE--------LLR-SVLAA 299 (942)
Q Consensus 235 ~i~~~~~~~DiIwvHDyhL~llp~~Lr~~~p~~~I~~flH~PfP~~---e~fr~---lp~r~~--------il~-~ll~a 299 (942)
.+...+.+.|+||+|......++..+..+..+.|+.++.|.-++.. +++.. ....+. +.+ .+..|
T Consensus 166 ~l~~~~~~~dviH~~s~~~~g~~~~~~~~~~~~p~I~t~Hg~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~a 245 (475)
T cd03813 166 AIARPLPKADVYHAVSTGYAGLLGALAKARRGTPFLLTEHGIYTRERKIELLQADWEMSYFRRLWIRFFESLGRLAYQAA 245 (475)
T ss_pred HhccCCCCCCEEeccCcchHHHHHHHHHHHhCCCEEEecCCccHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHhC
Confidence 4555566889999998765555555544455789999999866521 12111 000000 111 11234
Q ss_pred cEEeecCHHHHHHHHHHHHHHhccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHhcCCceEEE
Q 002285 300 DLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERFAGRKVMLG 379 (942)
Q Consensus 300 DlIgF~t~~~~~~Fl~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~ 379 (942)
|.|...+...... + ..++....++.++|||||.+.|.+.... ....++++|++
T Consensus 246 d~Ii~~s~~~~~~-~---------------~~~g~~~~ki~vIpNgid~~~f~~~~~~-----------~~~~~~~~i~~ 298 (475)
T cd03813 246 DRITTLYEGNRER-Q---------------IEDGADPEKIRVIPNGIDPERFAPARRA-----------RPEKEPPVVGL 298 (475)
T ss_pred CEEEecCHHHHHH-H---------------HHcCCCHHHeEEeCCCcCHHHcCCcccc-----------ccCCCCcEEEE
Confidence 5544433221111 1 1122345678999999999988753210 11246789999
Q ss_pred eecccccCCHHHHHHHHHHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCC
Q 002285 380 VDRLDMIKGIPQKILAFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSL 459 (942)
Q Consensus 380 VgRLd~~KGi~~lL~Af~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v 459 (942)
+||+.+.||++.+|+|++.+.++.|+++ |+++| ++++...+.+++++++.+++.. ..|+|+ +
T Consensus 299 vGrl~~~Kg~~~li~a~~~l~~~~p~~~----l~IvG-----~g~~~~~~~~e~~~li~~l~l~------~~V~f~-G-- 360 (475)
T cd03813 299 IGRVVPIKDIKTFIRAAAIVRKKIPDAE----GWVIG-----PTDEDPEYAEECRELVESLGLE------DNVKFT-G-- 360 (475)
T ss_pred EeccccccCHHHHHHHHHHHHHhCCCeE----EEEEC-----CCCcChHHHHHHHHHHHHhCCC------CeEEEc-C--
Confidence 9999999999999999999998888854 55443 3322234566777777776532 136654 4
Q ss_pred CHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhccCCCceEEEeCCCCcccccCC--------ceEEECCCCHHHHHHH
Q 002285 460 DFHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSLGA--------GAILVNPWNITEVASS 531 (942)
Q Consensus 460 ~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~lg~--------~gllVnP~D~~~lA~a 531 (942)
.+++..+|+.||++|+||..||||++++||||| +.|+|+|+.+|+.+.+.. +|++++|.|++++|++
T Consensus 361 -~~~v~~~l~~aDv~vlpS~~Eg~p~~vlEAma~----G~PVVatd~g~~~elv~~~~~~~~g~~G~lv~~~d~~~la~a 435 (475)
T cd03813 361 -FQNVKEYLPKLDVLVLTSISEGQPLVILEAMAA----GIPVVATDVGSCRELIEGADDEALGPAGEVVPPADPEALARA 435 (475)
T ss_pred -CccHHHHHHhCCEEEeCchhhcCChHHHHHHHc----CCCEEECCCCChHHHhcCCcccccCCceEEECCCCHHHHHHH
Confidence 678999999999999999999999999999999 357899999888877733 7999999999999999
Q ss_pred HHHHhCCCHHHHHHHHHHHhHHHHh-cCHHHHHHHHHH
Q 002285 532 IGYALNMPADEREKRHLHNFMHVTT-HTSQEWAATFVS 568 (942)
Q Consensus 532 I~~aL~m~~~er~~r~~~~~~~v~~-~~~~~W~~~fl~ 568 (942)
|.+++++ ++.+.++.+++++++.+ ++.+..+++|.+
T Consensus 436 i~~ll~~-~~~~~~~~~~a~~~v~~~~s~~~~~~~y~~ 472 (475)
T cd03813 436 ILRLLKD-PELRRAMGEAGRKRVERYYTLERMIDSYRR 472 (475)
T ss_pred HHHHhcC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 9999985 55677777888888765 466777777654
No 35
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=99.91 E-value=3.1e-22 Score=235.42 Aligned_cols=273 Identities=18% Similarity=0.211 Sum_probs=194.1
Q ss_pred CCCEEEEcCCchhhHHHHHHhhCCCCeEEEEeccCCCChhHhhcCCchH----HHHHHh-hhccEEeecCHHHHHHHHHH
Q 002285 242 EGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSSEIHRTLPSRT----ELLRSV-LAADLVGFHTYDYARHFVSA 316 (942)
Q Consensus 242 ~~DiIwvHDyhL~llp~~Lr~~~p~~~I~~flH~PfP~~e~fr~lp~r~----~il~~l-l~aDlIgF~t~~~~~~Fl~~ 316 (942)
++|+||+|+...+.++.++-.+..++|+++.+|.-+|.........+.. .+.+.+ ..+|.|...+....+.+..
T Consensus 144 kpDiIh~~~~~~~~~~~~~~ak~~~ip~V~~~h~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ad~ii~~S~~~~~~l~~- 222 (465)
T PLN02871 144 KPDLIHASSPGIMVFGALFYAKLLCVPLVMSYHTHVPVYIPRYTFSWLVKPMWDIIRFLHRAADLTLVTSPALGKELEA- 222 (465)
T ss_pred CCCEEEECCCchhHHHHHHHHHHhCCCEEEEEecCchhhhhcccchhhHHHHHHHHHHHHhhCCEEEECCHHHHHHHHH-
Confidence 6899999987666555544333346788888887554321000111100 111222 2477777776655554432
Q ss_pred HHHHhccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHh----cCCceEEEeecccccCCHHHH
Q 002285 317 CTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERF----AGRKVMLGVDRLDMIKGIPQK 392 (942)
Q Consensus 317 ~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~----~~~~iIl~VgRLd~~KGi~~l 392 (942)
.+ .....++.++|+|||.+.|.+..... .+++++ +++++|+++||+.+.||++.+
T Consensus 223 ----~~----------~~~~~kv~vi~nGvd~~~f~p~~~~~-------~~~~~~~~~~~~~~~i~~vGrl~~~K~~~~l 281 (465)
T PLN02871 223 ----AG----------VTAANRIRVWNKGVDSESFHPRFRSE-------EMRARLSGGEPEKPLIVYVGRLGAEKNLDFL 281 (465)
T ss_pred ----cC----------CCCcCeEEEeCCccCccccCCccccH-------HHHHHhcCCCCCCeEEEEeCCCchhhhHHHH
Confidence 01 01235788999999999987543221 123333 367899999999999999999
Q ss_pred HHHHHHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHcc
Q 002285 393 ILAFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITD 472 (942)
Q Consensus 393 L~Af~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~AD 472 (942)
++|++++ |++ .|+++ |+|+.. +++++++... +|+| .|.++.+++..+|+.||
T Consensus 282 i~a~~~~----~~~----~l~iv-----G~G~~~----~~l~~~~~~~----------~V~f-~G~v~~~ev~~~~~~aD 333 (465)
T PLN02871 282 KRVMERL----PGA----RLAFV-----GDGPYR----EELEKMFAGT----------PTVF-TGMLQGDELSQAYASGD 333 (465)
T ss_pred HHHHHhC----CCc----EEEEE-----eCChHH----HHHHHHhccC----------CeEE-eccCCHHHHHHHHHHCC
Confidence 9998764 554 45555 466643 3444444321 3554 68899999999999999
Q ss_pred EEEECCCCCCCChhHHHHHhhccCCCceEEEeCCCCccccc-----CCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHH
Q 002285 473 VALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSL-----GAGAILVNPWNITEVASSIGYALNMPADEREKRH 547 (942)
Q Consensus 473 v~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l-----g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~ 547 (942)
+||+||..||||++++||||| +.|+|+|+.+|+.+.+ |.+|++|+|.|+++++++|.+++++ ++.++++.
T Consensus 334 v~V~pS~~E~~g~~vlEAmA~----G~PVI~s~~gg~~eiv~~~~~~~~G~lv~~~d~~~la~~i~~ll~~-~~~~~~~~ 408 (465)
T PLN02871 334 VFVMPSESETLGFVVLEAMAS----GVPVVAARAGGIPDIIPPDQEGKTGFLYTPGDVDDCVEKLETLLAD-PELRERMG 408 (465)
T ss_pred EEEECCcccccCcHHHHHHHc----CCCEEEcCCCCcHhhhhcCCCCCceEEeCCCCHHHHHHHHHHHHhC-HHHHHHHH
Confidence 999999999999999999999 3579999999988776 4679999999999999999999975 56777778
Q ss_pred HHHhHHHHhcCHHHHHHHHHHH
Q 002285 548 LHNFMHVTTHTSQEWAATFVSE 569 (942)
Q Consensus 548 ~~~~~~v~~~~~~~W~~~fl~~ 569 (942)
+++++++++|+++..++.++..
T Consensus 409 ~~a~~~~~~fsw~~~a~~l~~~ 430 (465)
T PLN02871 409 AAAREEVEKWDWRAATRKLRNE 430 (465)
T ss_pred HHHHHHHHhCCHHHHHHHHHHH
Confidence 8889999999999999999874
No 36
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=99.91 E-value=6.8e-22 Score=225.57 Aligned_cols=287 Identities=18% Similarity=0.184 Sum_probs=201.9
Q ss_pred CCCCEEEEcCCchhhHHHHHHhhCCCCeEEEEeccCCCChhHh-----hcCCchHHH-HHHhhhccEEeecCHHHHHHHH
Q 002285 241 EEGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSSEIH-----RTLPSRTEL-LRSVLAADLVGFHTYDYARHFV 314 (942)
Q Consensus 241 ~~~DiIwvHDyhL~llp~~Lr~~~p~~~I~~flH~PfP~~e~f-----r~lp~r~~i-l~~ll~aDlIgF~t~~~~~~Fl 314 (942)
...|+||+|++...+++.+++ +..+.++++.+|..+|..... ........+ ...+..+|.|...+....+.+.
T Consensus 82 ~~~divh~~~~~~~~~~~~~~-~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~ 160 (388)
T TIGR02149 82 VDADVVHSHTWYTFLAGHLAK-KLYDKPLVVTAHSLEPLRPWKEEQLGGGYKLSSWAEKTAIEAADRVIAVSGGMREDIL 160 (388)
T ss_pred CCCCeEeecchhhhhHHHHHH-HhcCCCEEEEeecccccccccccccccchhHHHHHHHHHHhhCCEEEEccHHHHHHHH
Confidence 368999999987765555544 345788899999866532110 000001111 2234467888777765555443
Q ss_pred HHHHHHhccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHh---cCCceEEEeecccccCCHHH
Q 002285 315 SACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERF---AGRKVMLGVDRLDMIKGIPQ 391 (942)
Q Consensus 315 ~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIl~VgRLd~~KGi~~ 391 (942)
+. .. +-...++.++|+|+|.+.|.+.. ...+++++ .++++|+++||+.+.||++.
T Consensus 161 ~~----~~----------~~~~~~i~vi~ng~~~~~~~~~~--------~~~~~~~~~~~~~~~~i~~~Grl~~~Kg~~~ 218 (388)
T TIGR02149 161 KY----YP----------DLDPEKVHVIYNGIDTKEYKPDD--------GNVVLDRYGIDRSRPYILFVGRITRQKGVPH 218 (388)
T ss_pred HH----cC----------CCCcceEEEecCCCChhhcCCCc--------hHHHHHHhCCCCCceEEEEEcccccccCHHH
Confidence 21 00 11245788999999998876431 11233343 35678999999999999999
Q ss_pred HHHHHHHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHc
Q 002285 392 KILAFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAIT 471 (942)
Q Consensus 392 lL~Af~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~A 471 (942)
+++|++++. +++ .|+.++. ++...++.+++++++..++... ..|+++.+.++.+++..+|+.|
T Consensus 219 li~a~~~l~---~~~----~l~i~g~-----g~~~~~~~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~~~~~~~~a 281 (388)
T TIGR02149 219 LLDAVHYIP---KDV----QVVLCAG-----APDTPEVAEEVRQAVALLDRNR-----TGIIWINKMLPKEELVELLSNA 281 (388)
T ss_pred HHHHHHHHh---hcC----cEEEEeC-----CCCcHHHHHHHHHHHHHhcccc-----CceEEecCCCCHHHHHHHHHhC
Confidence 999999874 333 3444432 2222234555666655543221 1367788889999999999999
Q ss_pred cEEEECCCCCCCChhHHHHHhhccCCCceEEEeCCCCccccc--CCceEEECCCCH------HHHHHHHHHHhCCCHHHH
Q 002285 472 DVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSL--GAGAILVNPWNI------TEVASSIGYALNMPADER 543 (942)
Q Consensus 472 Dv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l--g~~gllVnP~D~------~~lA~aI~~aL~m~~~er 543 (942)
|++|+||..||||++++|||+| +.|+|+|+.+|..+.+ +.+|+++++.|. ++++++|.++++. ++++
T Consensus 282 Dv~v~ps~~e~~g~~~lEA~a~----G~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~~~~~~~l~~~i~~l~~~-~~~~ 356 (388)
T TIGR02149 282 EVFVCPSIYEPLGIVNLEAMAC----GTPVVASATGGIPEVVVDGETGFLVPPDNSDADGFQAELAKAINILLAD-PELA 356 (388)
T ss_pred CEEEeCCccCCCChHHHHHHHc----CCCEEEeCCCCHHHHhhCCCceEEcCCCCCcccchHHHHHHHHHHHHhC-HHHH
Confidence 9999999999999999999999 3589999999988877 568999999998 9999999999975 5567
Q ss_pred HHHHHHHhHHH-HhcCHHHHHHHHHHHHHH
Q 002285 544 EKRHLHNFMHV-TTHTSQEWAATFVSELND 572 (942)
Q Consensus 544 ~~r~~~~~~~v-~~~~~~~W~~~fl~~L~~ 572 (942)
+++..++++.+ +.++++.+++++++.+++
T Consensus 357 ~~~~~~a~~~~~~~~s~~~~~~~~~~~y~~ 386 (388)
T TIGR02149 357 KKMGIAGRKRAEEEFSWGSIAKKTVEMYRK 386 (388)
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence 77777777766 679999999999877664
No 37
>PLN00142 sucrose synthase
Probab=99.90 E-value=8.8e-22 Score=237.95 Aligned_cols=331 Identities=13% Similarity=0.114 Sum_probs=204.8
Q ss_pred HHHHHHHHHHHHHHHHhhc-CCCCEEEEcCCchhhHHHHHHhhCCCCeEEEEeccC-----------CCChh-HhhcC-C
Q 002285 222 FDAYKRANQMFAKVVNNIY-EEGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTP-----------FPSSE-IHRTL-P 287 (942)
Q Consensus 222 w~~Y~~vN~~fa~~i~~~~-~~~DiIwvHDyhL~llp~~Lr~~~p~~~I~~flH~P-----------fP~~e-~fr~l-p 287 (942)
|....+++...++.+.... ..+|+||.|.+.--+++..|+++. ++|.+++.|.- |...+ .++.. .
T Consensus 387 ~p~L~~f~~~~~~~~~~~~~~~PDlIHaHYwdsg~vA~~La~~l-gVP~v~T~HsL~k~K~~~~~~~~~~~e~~y~~~~r 465 (815)
T PLN00142 387 WPYLETFAEDAASEILAELQGKPDLIIGNYSDGNLVASLLAHKL-GVTQCTIAHALEKTKYPDSDIYWKKFDDKYHFSCQ 465 (815)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCEEEECCccHHHHHHHHHHHh-CCCEEEEcccchhhhccccCCcccccchhhhhhhc
Confidence 6666666666666554333 368999999665556777777665 78888888842 10000 01100 0
Q ss_pred chHHHHHHhhhccEEeecCHHHHHHHHHHHHHHhcc-ccC-C------CceecCCeeeEEEEeeCccCccccchhcCChh
Q 002285 288 SRTELLRSVLAADLVGFHTYDYARHFVSACTRILGL-EGT-P------EGVEDQGRLTRVAAFPIGIDSDRFVRALELPQ 359 (942)
Q Consensus 288 ~r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~l~~-~~~-~------~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~ 359 (942)
...+.+ .|..||.|.-.|+.-....-..+..+-.- ..+ + .++.+. ..++.++|+|+|...|.+......
T Consensus 466 ~~aE~~-a~~~Ad~IIasT~qEi~g~~~~i~qy~sh~~f~~p~L~rvv~GId~~--~~ki~VVppGvD~~~F~P~~~~~~ 542 (815)
T PLN00142 466 FTADLI-AMNHADFIITSTYQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVF--DPKFNIVSPGADMSIYFPYTEKQK 542 (815)
T ss_pred hHHHHH-HHHhhhHHHhCcHHHHhcccchhhhhhcccccccchhhhhhcccccc--ccCeeEECCCCChhhcCCCChHHh
Confidence 001111 34456665544432211000000000000 000 0 112111 237889999999998875321100
Q ss_pred --------hHHHH---HHHHHHh-----cCCceEEEeecccccCCHHHHHHHHHHhHHhCCCCCCcEEEEEEEcCCCCC-
Q 002285 360 --------VQDHI---NELKERF-----AGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPSWRDKVVLIQIAVPTRTD- 422 (942)
Q Consensus 360 --------~~~~~---~~lr~~~-----~~~~iIl~VgRLd~~KGi~~lL~Af~~ll~~~P~~~~~vvLvqi~~psrgd- 422 (942)
..+.. ...++.+ .++++|++|||+++.||+..+|+||.++.+..++ +.|++||.+..+.
T Consensus 543 rl~~l~n~I~~~l~~~~~~~e~lg~l~~~~kpvIl~VGRL~~~KGid~LIeA~a~l~~l~~~----~~LVIVGgg~d~~~ 618 (815)
T PLN00142 543 RLTSLHPSIEELLYSPEQNDEHIGYLKDRKKPIIFSMARLDRVKNLTGLVEWYGKNKRLREL----VNLVVVGGFIDPSK 618 (815)
T ss_pred hHHhhcccchhhcCChHHHHHHhCCccCCCCcEEEEEecCcccCCHHHHHHHHHHHHHhCCC----cEEEEEECCccccc
Confidence 00000 0011122 3567999999999999999999999988766655 4577676431111
Q ss_pred --hhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCC---CCCHHHHHHHHH-HccEEEECCCCCCCChhHHHHHhhccC
Q 002285 423 --VPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDR---SLDFHALCALYA-ITDVALVTSLRDGMNLVSYEFVACQAS 496 (942)
Q Consensus 423 --~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~---~v~~~el~aly~-~ADv~v~pSl~EG~~Lv~lEamA~~~~ 496 (942)
..+..+..+++.+++.+.+.. + .|.|++. .++..++..+|+ ++|+||+||.+||||+|++|||||
T Consensus 619 s~d~ee~~el~~L~~La~~lgL~----~--~V~flG~~~~~~~~~eLyr~iadaaDVfVlPS~~EgFGLvvLEAMA~--- 689 (815)
T PLN00142 619 SKDREEIAEIKKMHSLIEKYNLK----G--QFRWIAAQTNRVRNGELYRYIADTKGAFVQPALYEAFGLTVVEAMTC--- 689 (815)
T ss_pred cccHHHHHHHHHHHHHHHHcCCC----C--cEEEcCCcCCcccHHHHHHHHHhhCCEEEeCCcccCCCHHHHHHHHc---
Confidence 111112234566666665432 1 2555432 445577888777 579999999999999999999999
Q ss_pred CCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHhC---CCHHHHHHHHHHHhHHH-HhcCHHHHHHHHHHHH
Q 002285 497 KKGVLILSEFAGAAQSL--GAGAILVNPWNITEVASSIGYALN---MPADEREKRHLHNFMHV-TTHTSQEWAATFVSEL 570 (942)
Q Consensus 497 ~~G~lIlSe~~G~~~~l--g~~gllVnP~D~~~lA~aI~~aL~---m~~~er~~r~~~~~~~v-~~~~~~~W~~~fl~~L 570 (942)
+.|+|+|+.+|..+.+ |.+|++|+|.|++++|++|..++. .+++.+.++.+++++++ +.|+++..++++++-.
T Consensus 690 -GlPVVATdvGG~~EIV~dG~tG~LV~P~D~eaLA~aI~~lLekLl~Dp~lr~~mg~~Ar~rv~e~FSWe~~A~rll~L~ 768 (815)
T PLN00142 690 -GLPTFATCQGGPAEIIVDGVSGFHIDPYHGDEAANKIADFFEKCKEDPSYWNKISDAGLQRIYECYTWKIYAERLLTLG 768 (815)
T ss_pred -CCCEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 3589999999999888 789999999999999999987652 45667777778888887 6799999999887754
No 38
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=99.90 E-value=2e-21 Score=221.16 Aligned_cols=209 Identities=18% Similarity=0.224 Sum_probs=159.6
Q ss_pred eeEEEEeeCccCccccchhcCChhhHHHHHHHHHHh--cCCceEEEeecccccCCHHHHHHHHHHhHHhCCCCCCcEEEE
Q 002285 336 LTRVAAFPIGIDSDRFVRALELPQVQDHINELKERF--AGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPSWRDKVVLI 413 (942)
Q Consensus 336 ~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~--~~~~iIl~VgRLd~~KGi~~lL~Af~~ll~~~P~~~~~vvLv 413 (942)
..++.++|+|||.+.|.+..... ....++.+ .++++|+++||+++.||+..+|+|+..+++++|+...++.|+
T Consensus 159 ~~~~~vi~ngvd~~~~~~~~~~~-----~~~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~~~~~l~ 233 (374)
T TIGR03088 159 PAKIHQIYNGVDTERFHPSRGDR-----SPILPPDFFADESVVVGTVGRLQAVKDQPTLVRAFALLVRQLPEGAERLRLV 233 (374)
T ss_pred hhhEEEeccCccccccCCCccch-----hhhhHhhcCCCCCeEEEEEecCCcccCHHHHHHHHHHHHHhCcccccceEEE
Confidence 45788999999998886542111 11111222 457799999999999999999999999999888654457777
Q ss_pred EEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhh
Q 002285 414 QIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVAC 493 (942)
Q Consensus 414 qi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~ 493 (942)
++| +|+.. +++++++.+.+.. ..+++.+. .+++..+|+.||++|+||..||||++++|||+|
T Consensus 234 i~G-----~g~~~----~~~~~~~~~~~~~-------~~v~~~g~--~~~~~~~~~~adi~v~pS~~Eg~~~~~lEAma~ 295 (374)
T TIGR03088 234 IVG-----DGPAR----GACEQMVRAAGLA-------HLVWLPGE--RDDVPALMQALDLFVLPSLAEGISNTILEAMAS 295 (374)
T ss_pred Eec-----CCchH----HHHHHHHHHcCCc-------ceEEEcCC--cCCHHHHHHhcCEEEeccccccCchHHHHHHHc
Confidence 664 45433 3344444443321 23344553 578999999999999999999999999999999
Q ss_pred ccCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHH-HhcCHHHHHHHHHHHH
Q 002285 494 QASKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVASSIGYALNMPADEREKRHLHNFMHV-TTHTSQEWAATFVSEL 570 (942)
Q Consensus 494 ~~~~~G~lIlSe~~G~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~fl~~L 570 (942)
+.|+|+|+.+|..+.+ |.+|++++|.|++++|++|.+++++ ++.+..+.+++++++ ..|++...++++++..
T Consensus 296 ----G~Pvv~s~~~g~~e~i~~~~~g~~~~~~d~~~la~~i~~l~~~-~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y 370 (374)
T TIGR03088 296 ----GLPVIATAVGGNPELVQHGVTGALVPPGDAVALARALQPYVSD-PAARRAHGAAGRARAEQQFSINAMVAAYAGLY 370 (374)
T ss_pred ----CCCEEEcCCCCcHHHhcCCCceEEeCCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 3579999999988887 5689999999999999999999975 456777778888887 6899999988887765
Q ss_pred HH
Q 002285 571 ND 572 (942)
Q Consensus 571 ~~ 572 (942)
.+
T Consensus 371 ~~ 372 (374)
T TIGR03088 371 DQ 372 (374)
T ss_pred HH
Confidence 54
No 39
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=99.90 E-value=8e-22 Score=227.16 Aligned_cols=278 Identities=15% Similarity=0.151 Sum_probs=192.8
Q ss_pred CCCEEEEcCCchhhH-HHHHHhhCCCCeEEEEeccCCCChhHhhcCCchHHHHH-HhhhccEEeecCHHHHHHHHHHHHH
Q 002285 242 EGDVVWCHDYHLMFL-PQCLKEYNNNMKVGWFLHTPFPSSEIHRTLPSRTELLR-SVLAADLVGFHTYDYARHFVSACTR 319 (942)
Q Consensus 242 ~~DiIwvHDyhL~ll-p~~Lr~~~p~~~I~~flH~PfP~~e~fr~lp~r~~il~-~ll~aDlIgF~t~~~~~~Fl~~~~r 319 (942)
.+|+||+|+++.... ..++..+..++++++..|..|+..+.... +...+.+ .+..+|.|.+.+....+.+...
T Consensus 88 ~~DiIh~~~~~~~~~~~~~~~~~~~~~~~v~t~h~~~~~~~~~~~--~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~--- 162 (398)
T cd03796 88 RITIVHGHQAFSALAHEALLHARTMGLKTVFTDHSLFGFADASSI--HTNKLLRFSLADVDHVICVSHTSKENTVLR--- 162 (398)
T ss_pred CCCEEEECCCCchHHHHHHHHhhhcCCcEEEEecccccccchhhH--HhhHHHHHhhccCCEEEEecHhHhhHHHHH---
Confidence 689999999765433 33333344468899999987653222111 1111222 2345788887776554433211
Q ss_pred HhccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHhcCCceEEEeecccccCCHHHHHHHHHHh
Q 002285 320 ILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKF 399 (942)
Q Consensus 320 ~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi~~lL~Af~~l 399 (942)
......++.++|+|+|.+.|.+.... ..+++++|+++||+.+.||+..+|+|+..+
T Consensus 163 ------------~~~~~~k~~vi~ngvd~~~f~~~~~~------------~~~~~~~i~~~grl~~~Kg~~~li~a~~~l 218 (398)
T cd03796 163 ------------ASLDPERVSVIPNAVDSSDFTPDPSK------------RDNDKITIVVISRLVYRKGIDLLVGIIPEI 218 (398)
T ss_pred ------------hCCChhhEEEEcCccCHHHcCCCccc------------CCCCceEEEEEeccchhcCHHHHHHHHHHH
Confidence 11124578899999999888653210 124678999999999999999999999999
Q ss_pred HHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEECCC
Q 002285 400 LEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVTSL 479 (942)
Q Consensus 400 l~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~pSl 479 (942)
.+++|+++ |+++ |+++.... +++++.+.+.. + .|.| .|.++.+++..+|+.||++|+||.
T Consensus 219 ~~~~~~~~----l~i~-----G~g~~~~~----l~~~~~~~~l~----~--~v~~-~G~~~~~~~~~~l~~ad~~v~pS~ 278 (398)
T cd03796 219 CKKHPNVR----FIIG-----GDGPKRIL----LEEMREKYNLQ----D--RVEL-LGAVPHERVRDVLVQGHIFLNTSL 278 (398)
T ss_pred HhhCCCEE----EEEE-----eCCchHHH----HHHHHHHhCCC----C--eEEE-eCCCCHHHHHHHHHhCCEEEeCCh
Confidence 88888854 5544 45554433 44444443211 1 2554 578999999999999999999999
Q ss_pred CCCCChhHHHHHhhccCCCceEEEeCCCCcccccCCc-eEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhH-HHHhc
Q 002285 480 RDGMNLVSYEFVACQASKKGVLILSEFAGAAQSLGAG-AILVNPWNITEVASSIGYALNMPADEREKRHLHNFM-HVTTH 557 (942)
Q Consensus 480 ~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~lg~~-gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~-~v~~~ 557 (942)
.||||++++||||| +.|||+|+.+|..+.+..+ +++++ .|.++++++|.+++.++.+. .....++++ ..+.|
T Consensus 279 ~E~~g~~~~EAma~----G~PVI~s~~gg~~e~i~~~~~~~~~-~~~~~l~~~l~~~l~~~~~~-~~~~~~~~~~~~~~f 352 (398)
T cd03796 279 TEAFCIAIVEAASC----GLLVVSTRVGGIPEVLPPDMILLAE-PDVESIVRKLEEAISILRTG-KHDPWSFHNRVKKMY 352 (398)
T ss_pred hhccCHHHHHHHHc----CCCEEECCCCCchhheeCCceeecC-CCHHHHHHHHHHHHhChhhh-hhHHHHHHHHHHhhC
Confidence 99999999999999 3578899999988877333 44454 49999999999999875433 334444444 45779
Q ss_pred CHHHHHHHHHHHHHHhH
Q 002285 558 TSQEWAATFVSELNDTI 574 (942)
Q Consensus 558 ~~~~W~~~fl~~L~~~~ 574 (942)
+++.-++++++..+...
T Consensus 353 s~~~~~~~~~~~y~~l~ 369 (398)
T cd03796 353 SWEDVAKRTEKVYDRIL 369 (398)
T ss_pred CHHHHHHHHHHHHHHHh
Confidence 99999999988777654
No 40
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=99.89 E-value=3.9e-21 Score=218.98 Aligned_cols=295 Identities=20% Similarity=0.216 Sum_probs=204.3
Q ss_pred HHHHhhcCCCCEEEEcCCchhhHHHHHHhhCCCCeEEEEeccCCCChhHhhc-----CCc-hHHH-HHHhhhccEEeecC
Q 002285 234 KVVNNIYEEGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSSEIHRT-----LPS-RTEL-LRSVLAADLVGFHT 306 (942)
Q Consensus 234 ~~i~~~~~~~DiIwvHDyhL~llp~~Lr~~~p~~~I~~flH~PfP~~e~fr~-----lp~-r~~i-l~~ll~aDlIgF~t 306 (942)
..+.+...++|+|++|.+....++..+.+. .++++.+..|........... .+. +..+ ...+..+|.|.+.+
T Consensus 93 ~~~~~~~~~~Div~~~~~~~~~~~~~~~~~-~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s 171 (398)
T cd03800 93 RFLRREGGRPDLIHAHYWDSGLVALLLARR-LGIPLVHTFHSLGAVKRRHLGAADTYEPARRIEAEERLLRAADRVIAST 171 (398)
T ss_pred HHHHhcCCCccEEEEecCccchHHHHHHhh-cCCceEEEeecccccCCcccccccccchhhhhhHHHHHHhhCCEEEEcC
Confidence 333333347899999988766666665544 367888888875432110000 000 1111 22345689998888
Q ss_pred HHHHHHHHHHHHHHhccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHhcCCceEEEeeccccc
Q 002285 307 YDYARHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERFAGRKVMLGVDRLDMI 386 (942)
Q Consensus 307 ~~~~~~Fl~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~ 386 (942)
......+... . .....++.++|+|+|.+.|.+..... .....+. ...++++|+++||+++.
T Consensus 172 ~~~~~~~~~~----~-----------~~~~~~~~vi~ng~~~~~~~~~~~~~---~~~~~~~-~~~~~~~i~~~gr~~~~ 232 (398)
T cd03800 172 PQEAEELYSL----Y-----------GAYPRRIRVVPPGVDLERFTPYGRAE---ARRARLL-RDPDKPRILAVGRLDPR 232 (398)
T ss_pred HHHHHHHHHH----c-----------cccccccEEECCCCCccceecccchh---hHHHhhc-cCCCCcEEEEEcccccc
Confidence 7665554321 1 11233588999999998886542211 1111111 12467899999999999
Q ss_pred CCHHHHHHHHHHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHH
Q 002285 387 KGIPQKILAFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCA 466 (942)
Q Consensus 387 KGi~~lL~Af~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~a 466 (942)
||+..+++|+..+.+++|++ .|+++|....... .....++++++.+.+.. ..|. +.+.++.+++..
T Consensus 233 k~~~~ll~a~~~l~~~~~~~----~l~i~G~~~~~~~---~~~~~~~~~~~~~~~~~------~~v~-~~g~~~~~~~~~ 298 (398)
T cd03800 233 KGIDTLIRAYAELPELRERA----NLVIVGGPRDDIL---AMDEEELRELARELGVI------DRVD-FPGRVSREDLPA 298 (398)
T ss_pred cCHHHHHHHHHHHHHhCCCe----EEEEEECCCCcch---hhhhHHHHHHHHhcCCC------ceEE-EeccCCHHHHHH
Confidence 99999999999998887774 4666654322111 12234455565554321 1244 568899999999
Q ss_pred HHHHccEEEECCCCCCCChhHHHHHhhccCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHhCCCHHHHH
Q 002285 467 LYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVASSIGYALNMPADERE 544 (942)
Q Consensus 467 ly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~ 544 (942)
+|+.||++++||..||+|++++||||| +.|+|+|+.+|..+.+ +.+|++++|.|+++++++|.+++++ +++++
T Consensus 299 ~~~~adi~l~ps~~e~~~~~l~Ea~a~----G~Pvi~s~~~~~~e~i~~~~~g~~~~~~~~~~l~~~i~~l~~~-~~~~~ 373 (398)
T cd03800 299 LYRAADVFVNPALYEPFGLTALEAMAC----GLPVVATAVGGPRDIVVDGVTGLLVDPRDPEALAAALRRLLTD-PALRR 373 (398)
T ss_pred HHHhCCEEEecccccccCcHHHHHHhc----CCCEEECCCCCHHHHccCCCCeEEeCCCCHHHHHHHHHHHHhC-HHHHH
Confidence 999999999999999999999999999 3579999999988887 4679999999999999999999976 45677
Q ss_pred HHHHHHhHHH-HhcCHHHHHHHHH
Q 002285 545 KRHLHNFMHV-TTHTSQEWAATFV 567 (942)
Q Consensus 545 ~r~~~~~~~v-~~~~~~~W~~~fl 567 (942)
.+..++++++ +.++++.++++++
T Consensus 374 ~~~~~a~~~~~~~~s~~~~~~~~~ 397 (398)
T cd03800 374 RLSRAGLRRARARYTWERVAARLL 397 (398)
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHh
Confidence 7778888887 8899999988875
No 41
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=99.89 E-value=2.2e-21 Score=225.34 Aligned_cols=290 Identities=12% Similarity=0.060 Sum_probs=188.7
Q ss_pred CCCEEEEcCCchhhHHHHHHhhCCCCeEEEEeccCCCChhHhhcCCchHHHHHHhhhccEEeecCHHHHHHHHHHHHHHh
Q 002285 242 EGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSSEIHRTLPSRTELLRSVLAADLVGFHTYDYARHFVSACTRIL 321 (942)
Q Consensus 242 ~~DiIwvHDyhL~llp~~Lr~~~p~~~I~~flH~PfP~~e~fr~lp~r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~l 321 (942)
.+|+||+|++...++..+.........|+...|. ++....-+.+- ++. ..+..++++.-.+. ++.+.....+.+.
T Consensus 280 rpDIVHt~~~~a~l~g~laA~lagvpviv~~~h~-~~~~~~~r~~~-~e~--~~~~~a~~i~~~sd-~v~~s~~v~~~l~ 354 (578)
T PRK15490 280 KLDYLSVWQDGACLMIALAALIAGVPRIQLGLRG-LPPVVRKRLFK-PEY--EPLYQALAVVPGVD-FMSNNHCVTRHYA 354 (578)
T ss_pred CCCEEEEcCcccHHHHHHHHHhcCCCEEEEeecc-cCCcchhhHHH-HHH--HHhhhhceeEecch-hhhccHHHHHHHH
Confidence 6799999999876665555544433344555676 33221111110 010 12233344332221 2222222112111
Q ss_pred ccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHh-cCCceEEEeecccccCCHHHHHHHHHHhH
Q 002285 322 GLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERF-AGRKVMLGVDRLDMIKGIPQKILAFEKFL 400 (942)
Q Consensus 322 ~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~-~~~~iIl~VgRLd~~KGi~~lL~Af~~ll 400 (942)
. .++....+|.++|||||++.|.+....+ ......++..+ .+.++|++|+|+.+.||+..+|+|+.+++
T Consensus 355 ~--------~lgip~~KI~VIyNGVD~~rf~p~~~~~--~~~r~~~~~~l~~~~~vIg~VgRl~~~Kg~~~LI~A~a~ll 424 (578)
T PRK15490 355 D--------WLKLEAKHFQVVYNGVLPPSTEPSSEVP--HKIWQQFTQKTQDADTTIGGVFRFVGDKNPFAWIDFAARYL 424 (578)
T ss_pred H--------HhCCCHHHEEEEeCCcchhhcCccchhh--HHHHHHhhhccCCCCcEEEEEEEEehhcCHHHHHHHHHHHH
Confidence 0 1122467899999999999887643211 01112222223 34578899999999999999999999999
Q ss_pred HhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEECCCC
Q 002285 401 EENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVTSLR 480 (942)
Q Consensus 401 ~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~pSl~ 480 (942)
+.+|+++ |+++ |+|+. ++++++++.+.+.. ..|+|++ + .+++..+|+.||+||+||.+
T Consensus 425 k~~pdir----LvIV-----GdG~~----~eeLk~la~elgL~------d~V~FlG-~--~~Dv~~~LaaADVfVlPS~~ 482 (578)
T PRK15490 425 QHHPATR----FVLV-----GDGDL----RAEAQKRAEQLGIL------ERILFVG-A--SRDVGYWLQKMNVFILFSRY 482 (578)
T ss_pred hHCCCeE----EEEE-----eCchh----HHHHHHHHHHcCCC------CcEEECC-C--hhhHHHHHHhCCEEEEcccc
Confidence 9888854 5544 56664 34555555554321 1366554 3 57899999999999999999
Q ss_pred CCCChhHHHHHhhccCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHhCCC--HHHHHHHHHHHhHHH-H
Q 002285 481 DGMNLVSYEFVACQASKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVASSIGYALNMP--ADEREKRHLHNFMHV-T 555 (942)
Q Consensus 481 EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~--~~er~~r~~~~~~~v-~ 555 (942)
||||++++||||| +.|+|+|+.+|..+.+ |.+|++|+|.|++++++++..+..+. .+.+..+.+++++++ +
T Consensus 483 EGfp~vlLEAMA~----GlPVVATdvGG~~EiV~dG~nG~LVp~~D~~aLa~ai~lA~aL~~ll~~~~~mg~~ARe~V~e 558 (578)
T PRK15490 483 EGLPNVLIEAQMV----GVPVISTPAGGSAECFIEGVSGFILDDAQTVNLDQACRYAEKLVNLWRSRTGICQQTQSFLQE 558 (578)
T ss_pred cCccHHHHHHHHh----CCCEEEeCCCCcHHHcccCCcEEEECCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999 3589999999988877 78999999999999998874432221 223444557778877 5
Q ss_pred hcCHHHHHHHHHHHHHH
Q 002285 556 THTSQEWAATFVSELND 572 (942)
Q Consensus 556 ~~~~~~W~~~fl~~L~~ 572 (942)
.|+++..++.+++.++.
T Consensus 559 ~FS~e~Mv~~y~ki~~~ 575 (578)
T PRK15490 559 RFTVEHMVGTFVKTIAS 575 (578)
T ss_pred hCCHHHHHHHHHHHHHh
Confidence 79999999998877664
No 42
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=99.89 E-value=1.5e-22 Score=211.85 Aligned_cols=194 Identities=21% Similarity=0.343 Sum_probs=145.8
Q ss_pred EEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccCceEEeecceEE
Q 002285 604 LLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYNMWLAAENGMFL 683 (942)
Q Consensus 604 Li~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l~liaehG~~i 683 (942)
||++||||||++. ....++++++++|++|.++ +..|+|+|||+...+.++++.++.++|++||+++
T Consensus 1 li~~D~DgTL~~~-------------~~~~~~~~~~~~l~~l~~~-g~~~~i~TGR~~~~~~~~~~~~~~~~i~~nGa~i 66 (204)
T TIGR01484 1 LLFFDLDGTLLDP-------------NAHELSPETIEALERLREA-GVKVVLVTGRSLAEIKELLKQLPLPLIAENGALI 66 (204)
T ss_pred CEEEeCcCCCcCC-------------CCCcCCHHHHHHHHHHHHC-CCEEEEECCCCHHHHHHHHHhCCCCEEECCCcEE
Confidence 5899999999985 2256899999999999984 6999999999999999999888889999999999
Q ss_pred EeCCCc-eeecccCCCChhHH---HHHHHHHHHHHhcCCCeeeeeecceEEEEEeccchHHhHHHHHHHHHHHhcCCCC-
Q 002285 684 RLTTGE-WMTTMPENLNMDWV---DSVKHVFEYFTERTPRSHFEVRETSLVWNYKYADLEFGRLQARDILQHLWSGPIS- 758 (942)
Q Consensus 684 r~~~~~-w~~~~~~~~~~~w~---~~v~~il~~~~~r~~Gs~iE~K~~sl~~hyr~ad~e~~~~qa~el~~~L~~~~~~- 758 (942)
+..++. |.. . ......|. +.+..++..+...+++..+|.+...+++||+.... ......++...+ .....
T Consensus 67 ~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~ 141 (204)
T TIGR01484 67 FYPGEILYIE-P-SDVFEEILGIKEEIGAELKSLSEHYVGTFIEDKAIAVAIHYVGAEL--GQELDSKMRERL-EKIGRN 141 (204)
T ss_pred EECCEEEEEc-c-cccHHHHHHhhhhcCceeeeeccccccceeecccceeeEEEeccch--hhHHHHHHHHHH-Hhhccc
Confidence 864432 332 1 11111111 23344455556677888889999999999987511 111223334444 32221
Q ss_pred CCCeEEE-EcCcEEEEEECCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCc
Q 002285 759 NASVDVV-QGGRSVEVRAVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 759 ~~~v~v~-~G~~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
...+.+. .+..++||+|++++||.|++.++++++ ++.+++++||| +.||++||+.++.
T Consensus 142 ~~~~~~~~s~~~~~ev~p~~~~K~~~~~~~~~~~~------~~~~~~~~~GD-~~nD~~~~~~~~~ 200 (204)
T TIGR01484 142 DLELEAIYVGKTDLEVLPAGVDKGSALQALLKELN------GKRDEILAFGD-SGNDEEMFEVAGL 200 (204)
T ss_pred cCcEEEEEecCCEEEEecCCCChHHHHHHHHHHhC------CCHHHEEEEcC-CHHHHHHHHHcCC
Confidence 2457777 699999999999999999999999987 56789999999 9999999999875
No 43
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=99.89 E-value=9.7e-21 Score=212.27 Aligned_cols=276 Identities=19% Similarity=0.259 Sum_probs=192.8
Q ss_pred CCCEEEEcCCchhhHHHHHHhhCCCCeEEEEeccCCCChhHhhcCCchHHHHHHh-hhccEEeecCHHHHHHHHHHHHHH
Q 002285 242 EGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSSEIHRTLPSRTELLRSV-LAADLVGFHTYDYARHFVSACTRI 320 (942)
Q Consensus 242 ~~DiIwvHDyhL~llp~~Lr~~~p~~~I~~flH~PfP~~e~fr~lp~r~~il~~l-l~aDlIgF~t~~~~~~Fl~~~~r~ 320 (942)
++|+||+|.+|..++..+++...+..++....|...+...+ +..+.+.. ..++.+...+....+.|...
T Consensus 79 ~pdiv~~~~~~~~~~~~l~~~~~~~~~~v~~~h~~~~~~~~------~~~~~~~~~~~~~~~~~~s~~~~~~~~~~---- 148 (360)
T cd04951 79 KPDVVHAHMFHANIFARLLRLFLPSPPLICTAHSKNEGGRL------RMLAYRLTDFLSDLTTNVSKEALDYFIAS---- 148 (360)
T ss_pred CCCEEEEcccchHHHHHHHHhhCCCCcEEEEeeccCchhHH------HHHHHHHHhhccCceEEEcHHHHHHHHhc----
Confidence 67999999999888888877776677888888864322111 01111110 11344433343333333321
Q ss_pred hccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHh---cCCceEEEeecccccCCHHHHHHHHH
Q 002285 321 LGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERF---AGRKVMLGVDRLDMIKGIPQKILAFE 397 (942)
Q Consensus 321 l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIl~VgRLd~~KGi~~lL~Af~ 397 (942)
..-...++.++|+|+|...|.+.. .....+++++ .++++++++||+.+.||+..+++|+.
T Consensus 149 -----------~~~~~~~~~~i~ng~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~l~~g~~~~~kg~~~li~a~~ 211 (360)
T cd04951 149 -----------KAFNANKSFVVYNGIDTDRFRKDP------ARRLKIRNALGVKNDTFVILAVGRLVEAKDYPNLLKAFA 211 (360)
T ss_pred -----------cCCCcccEEEEccccchhhcCcch------HHHHHHHHHcCcCCCCEEEEEEeeCchhcCcHHHHHHHH
Confidence 001235788999999998876432 1122345444 36788999999999999999999999
Q ss_pred HhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEEC
Q 002285 398 KFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVT 477 (942)
Q Consensus 398 ~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~p 477 (942)
++.+++|+++ |+++ |+++..++ +.+.+.+.+.. ..|.++ +. .+++..+|+.||++++|
T Consensus 212 ~l~~~~~~~~----l~i~-----G~g~~~~~----~~~~~~~~~~~------~~v~~~-g~--~~~~~~~~~~ad~~v~~ 269 (360)
T cd04951 212 KLLSDYLDIK----LLIA-----GDGPLRAT----LERLIKALGLS------NRVKLL-GL--RDDIAAYYNAADLFVLS 269 (360)
T ss_pred HHHhhCCCeE----EEEE-----cCCCcHHH----HHHHHHhcCCC------CcEEEe-cc--cccHHHHHHhhceEEec
Confidence 9998888754 5544 44554333 34444443321 125554 43 46899999999999999
Q ss_pred CCCCCCChhHHHHHhhccCCCceEEEeCCCCcccccCCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHHhc
Q 002285 478 SLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSLGAGAILVNPWNITEVASSIGYALNMPADEREKRHLHNFMHVTTH 557 (942)
Q Consensus 478 Sl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~lg~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~ 557 (942)
|..||||++++|||+| +.|+|+|+.+|..+.+..+|+++++.|+++++++|.++++++++.+..+..+.....+.+
T Consensus 270 s~~e~~~~~~~Ea~a~----G~PvI~~~~~~~~e~i~~~g~~~~~~~~~~~~~~i~~ll~~~~~~~~~~~~~~~~~~~~~ 345 (360)
T cd04951 270 SAWEGFGLVVAEAMAC----ELPVVATDAGGVREVVGDSGLIVPISDPEALANKIDEILKMSGEERDIIGARRERIVKKF 345 (360)
T ss_pred ccccCCChHHHHHHHc----CCCEEEecCCChhhEecCCceEeCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999 357999999888888866899999999999999999999877766666655533455889
Q ss_pred CHHHHHHHHHHHH
Q 002285 558 TSQEWAATFVSEL 570 (942)
Q Consensus 558 ~~~~W~~~fl~~L 570 (942)
+++.+++.+++-+
T Consensus 346 s~~~~~~~~~~~y 358 (360)
T cd04951 346 SINSIVQQWLTLY 358 (360)
T ss_pred CHHHHHHHHHHHh
Confidence 9999999887654
No 44
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=99.88 E-value=1e-20 Score=213.65 Aligned_cols=270 Identities=17% Similarity=0.120 Sum_probs=190.1
Q ss_pred CCCEEEEcCCchhhHHHHHHhhCCCCeEEEEeccCCCC--hhHhhcCCc--hHHHHH-HhhhccEEeecCHHHHHHHHHH
Q 002285 242 EGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPS--SEIHRTLPS--RTELLR-SVLAADLVGFHTYDYARHFVSA 316 (942)
Q Consensus 242 ~~DiIwvHDyhL~llp~~Lr~~~p~~~I~~flH~PfP~--~e~fr~lp~--r~~il~-~ll~aDlIgF~t~~~~~~Fl~~ 316 (942)
++|+||+|+.........+.++ .++++.+.+|..... .......++ ...+.+ .+..+|.|.+.+....+.+..
T Consensus 82 ~~dvvh~~~~~~~~~~~~~~~~-~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~- 159 (367)
T cd05844 82 RPDLVHAHFGFDGVYALPLARR-LGVPLVVTFHGFDATTSLALLLRSRWALYARRRRRLARRAALFIAVSQFIRDRLLA- 159 (367)
T ss_pred CCCEEEeccCchHHHHHHHHHH-cCCCEEEEEeCccccccchhhcccchhHHHHHHHHHHHhcCEEEECCHHHHHHHHH-
Confidence 5699999976544433333332 357888888853211 111100001 112222 234578888777654444432
Q ss_pred HHHHhccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHhcCCceEEEeecccccCCHHHHHHHH
Q 002285 317 CTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERFAGRKVMLGVDRLDMIKGIPQKILAF 396 (942)
Q Consensus 317 ~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi~~lL~Af 396 (942)
++....++.++|+|+|.+.|.+... ..++++|+++||+.+.||++.+++|+
T Consensus 160 ---------------~~~~~~~i~vi~~g~d~~~~~~~~~--------------~~~~~~i~~~G~~~~~K~~~~li~a~ 210 (367)
T cd05844 160 ---------------LGFPPEKVHVHPIGVDTAKFTPATP--------------ARRPPRILFVGRFVEKKGPLLLLEAF 210 (367)
T ss_pred ---------------cCCCHHHeEEecCCCCHHhcCCCCC--------------CCCCcEEEEEEeeccccChHHHHHHH
Confidence 1123457889999999988764311 13467899999999999999999999
Q ss_pred HHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEE
Q 002285 397 EKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALV 476 (942)
Q Consensus 397 ~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~ 476 (942)
..+.+++|+++ |+++ |+++. .+++++++.+.+.. ..|+ +.+.++.+++..+|+.||++++
T Consensus 211 ~~l~~~~~~~~----l~iv-----G~g~~----~~~~~~~~~~~~~~------~~v~-~~g~~~~~~l~~~~~~ad~~v~ 270 (367)
T cd05844 211 ARLARRVPEVR----LVII-----GDGPL----LAALEALARALGLG------GRVT-FLGAQPHAEVRELMRRARIFLQ 270 (367)
T ss_pred HHHHHhCCCeE----EEEE-----eCchH----HHHHHHHHHHcCCC------CeEE-ECCCCCHHHHHHHHHhCCEEEE
Confidence 99998888754 5555 44443 34455555553221 1254 5678999999999999999999
Q ss_pred CCC------CCCCChhHHHHHhhccCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHH
Q 002285 477 TSL------RDGMNLVSYEFVACQASKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVASSIGYALNMPADEREKRHL 548 (942)
Q Consensus 477 pSl------~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~ 548 (942)
||. .||||++++||||| +.|+|+|+.+|..+.+ +.+|++++|.|+++++++|.+++++ ++.+.++..
T Consensus 271 ps~~~~~~~~E~~~~~~~EA~a~----G~PvI~s~~~~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~~~-~~~~~~~~~ 345 (367)
T cd05844 271 PSVTAPSGDAEGLPVVLLEAQAS----GVPVVATRHGGIPEAVEDGETGLLVPEGDVAALAAALGRLLAD-PDLRARMGA 345 (367)
T ss_pred CcccCCCCCccCCchHHHHHHHc----CCCEEEeCCCCchhheecCCeeEEECCCCHHHHHHHHHHHHcC-HHHHHHHHH
Confidence 997 59999999999999 3589999999988877 5789999999999999999999975 456777777
Q ss_pred HHhHHH-HhcCHHHHHHHHH
Q 002285 549 HNFMHV-TTHTSQEWAATFV 567 (942)
Q Consensus 549 ~~~~~v-~~~~~~~W~~~fl 567 (942)
++++++ +.++++.+++.+.
T Consensus 346 ~a~~~~~~~~s~~~~~~~l~ 365 (367)
T cd05844 346 AGRRRVEERFDLRRQTAKLE 365 (367)
T ss_pred HHHHHHHHHCCHHHHHHHHh
Confidence 888877 5789999888764
No 45
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=99.88 E-value=1.1e-20 Score=212.05 Aligned_cols=266 Identities=20% Similarity=0.235 Sum_probs=189.2
Q ss_pred CCCEEEEcCCchhhHHHHHHhhCCCCeEEEEeccCCCChhHhhcCCchHHHHHHhhhccEEeecCHHHHHHHHHHHHHHh
Q 002285 242 EGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSSEIHRTLPSRTELLRSVLAADLVGFHTYDYARHFVSACTRIL 321 (942)
Q Consensus 242 ~~DiIwvHDyhL~llp~~Lr~~~p~~~I~~flH~PfP~~e~fr~lp~r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~l 321 (942)
++|+|++|..+...+..++.+. .++++.+.+|..++.... ... .+..+|.+.+.+......+. ...
T Consensus 78 ~~dii~~~~~~~~~~~~~~~~~-~~~~~i~~~h~~~~~~~~------~~~---~~~~~~~vi~~s~~~~~~~~----~~~ 143 (355)
T cd03819 78 KVDIVHARSRAPAWSAYLAARR-TRPPFVTTVHGFYSVNFR------YNA---IMARGDRVIAVSNFIADHIR----ENY 143 (355)
T ss_pred CCCEEEECCCchhHHHHHHHHh-cCCCEEEEeCCchhhHHH------HHH---HHHhcCEEEEeCHHHHHHHH----Hhc
Confidence 6799999987765554444433 378899999987653321 112 23458888776654444332 111
Q ss_pred ccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHh---cCCceEEEeecccccCCHHHHHHHHHH
Q 002285 322 GLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERF---AGRKVMLGVDRLDMIKGIPQKILAFEK 398 (942)
Q Consensus 322 ~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIl~VgRLd~~KGi~~lL~Af~~ 398 (942)
+ ....++.++|+|||.+.|.+..... .....+++++ .++++|+++||+.+.||+..+++|+..
T Consensus 144 ~-----------~~~~k~~~i~ngi~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~i~~~Gr~~~~Kg~~~li~~~~~ 209 (355)
T cd03819 144 G-----------VDPDRIRVIPRGVDLDRFDPGAVPP---ERILALAREWPLPKGKPVILLPGRLTRWKGQEVFIEALAR 209 (355)
T ss_pred C-----------CChhhEEEecCCccccccCccccch---HHHHHHHHHcCCCCCceEEEEeeccccccCHHHHHHHHHH
Confidence 1 1245788999999998886543221 1222244444 357789999999999999999999999
Q ss_pred hHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEECC
Q 002285 399 FLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVTS 478 (942)
Q Consensus 399 ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~pS 478 (942)
+.+.++++ .|+++| +++....+.+++.+.+.+.+.. ..|+|+ +. .+++..+|+.||++++||
T Consensus 210 l~~~~~~~----~l~ivG-----~~~~~~~~~~~~~~~~~~~~~~------~~v~~~-g~--~~~~~~~l~~ad~~i~ps 271 (355)
T cd03819 210 LKKDDPDV----HLLIVG-----DAQGRRFYYAELLELIKRLGLQ------DRVTFV-GH--CSDMPAAYALADIVVSAS 271 (355)
T ss_pred HHhcCCCe----EEEEEE-----CCcccchHHHHHHHHHHHcCCc------ceEEEc-CC--cccHHHHHHhCCEEEecC
Confidence 98877764 455554 3333334455555555543321 125554 44 678999999999999999
Q ss_pred -CCCCCChhHHHHHhhccCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHH
Q 002285 479 -LRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVASSIGYALNMPADEREKRHLHNFMHVT 555 (942)
Q Consensus 479 -l~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~ 555 (942)
..||||++++||||| +.|+|+|+.+|..+.+ +.+|+++++.|+++++++|..++..+++++.++.+++++++.
T Consensus 272 ~~~e~~~~~l~EA~a~----G~PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~a~~~~~ 347 (355)
T cd03819 272 TEPEAFGRTAVEAQAM----GRPVIASDHGGARETVRPGETGLLVPPGDAEALAQALDQILSLLPEGRAKMFAKARMCVE 347 (355)
T ss_pred CCCCCCchHHHHHHhc----CCCEEEcCCCCcHHHHhCCCceEEeCCCCHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHH
Confidence 789999999999999 3579999988887777 457999999999999999998888788888888888888875
Q ss_pred hc
Q 002285 556 TH 557 (942)
Q Consensus 556 ~~ 557 (942)
++
T Consensus 348 ~~ 349 (355)
T cd03819 348 TL 349 (355)
T ss_pred Hh
Confidence 43
No 46
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=99.88 E-value=1e-20 Score=228.93 Aligned_cols=280 Identities=15% Similarity=0.080 Sum_probs=181.4
Q ss_pred CCCEEEEcCCchhhHHHHHHhhCCCCeEEE-EeccCCC--ChhHhhcCCchHHHHHHhhhccEEeecC-HHH-HHHHHHH
Q 002285 242 EGDVVWCHDYHLMFLPQCLKEYNNNMKVGW-FLHTPFP--SSEIHRTLPSRTELLRSVLAADLVGFHT-YDY-ARHFVSA 316 (942)
Q Consensus 242 ~~DiIwvHDyhL~llp~~Lr~~~p~~~I~~-flH~PfP--~~e~fr~lp~r~~il~~ll~aDlIgF~t-~~~-~~~Fl~~ 316 (942)
++||||+|.+.-..+..+..+.. .+++++ .+|+-.+ ..+.++.. ...+...+..++.+.+.+ ..+ .+.+..
T Consensus 400 kpDIVH~h~~~a~~lg~lAa~~~-gvPvIv~t~h~~~~~~~~~~~~~~--~~~l~~~l~~~~~~i~Vs~S~~~~~~l~~- 475 (694)
T PRK15179 400 VPSVVHIWQDGSIFACALAALLA-GVPRIVLSVRTMPPVDRPDRYRVE--YDIIYSELLKMRGVALSSNSQFAAHRYAD- 475 (694)
T ss_pred CCcEEEEeCCcHHHHHHHHHHHc-CCCEEEEEeCCCccccchhHHHHH--HHHHHHHHHhcCCeEEEeCcHHHHHHHHH-
Confidence 67999999988776666665443 445443 5565211 11111100 011222333333332222 122 222211
Q ss_pred HHHHhccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHhc-CCceEEEeecccccCCHHHHHHH
Q 002285 317 CTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERFA-GRKVMLGVDRLDMIKGIPQKILA 395 (942)
Q Consensus 317 ~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~-~~~iIl~VgRLd~~KGi~~lL~A 395 (942)
. +.....+|.++|||||.+.|.+. +...+....++.... +.++|++|||+++.||+..+|+|
T Consensus 476 ---~-----------~g~~~~kI~VI~NGVd~~~f~~~---~~~~~~~~~~~~~~~~~~~vIg~VGRL~~~KG~~~LI~A 538 (694)
T PRK15179 476 ---W-----------LGVDERRIPVVYNGLAPLKSVQD---DACTAMMAQFDARTSDARFTVGTVMRVDDNKRPFLWVEA 538 (694)
T ss_pred ---H-----------cCCChhHEEEECCCcCHHhcCCC---chhhHHHHhhccccCCCCeEEEEEEeCCccCCHHHHHHH
Confidence 1 12234689999999999888642 111111122222222 46788999999999999999999
Q ss_pred HHHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEE
Q 002285 396 FEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVAL 475 (942)
Q Consensus 396 f~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v 475 (942)
|.++++++|+++ |+++ |+|+. ++++++++.+.+.. ..|+| .|.. +++..+|+.||+||
T Consensus 539 ~a~l~~~~p~~~----LvIv-----G~G~~----~~~L~~l~~~lgL~------~~V~f-lG~~--~dv~~ll~aaDv~V 596 (694)
T PRK15179 539 AQRFAASHPKVR----FIMV-----GGGPL----LESVREFAQRLGMG------ERILF-TGLS--RRVGYWLTQFNAFL 596 (694)
T ss_pred HHHHHHHCcCeE----EEEE-----ccCcc----hHHHHHHHHHcCCC------CcEEE-cCCc--chHHHHHHhcCEEE
Confidence 999999999864 5544 45553 34455666555432 12554 5554 57999999999999
Q ss_pred ECCCCCCCChhHHHHHhhccCCCceEEEeCCCCccccc--CCceEEECCCCH--HHHHHHHHHHhCCCHHHHHHHHHHHh
Q 002285 476 VTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSL--GAGAILVNPWNI--TEVASSIGYALNMPADEREKRHLHNF 551 (942)
Q Consensus 476 ~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l--g~~gllVnP~D~--~~lA~aI~~aL~m~~~er~~r~~~~~ 551 (942)
+||.+||||++++||||| +.|||+|+.+|..+.+ |.+|++|+|.|. ++++++|.+++.... ....+.++++
T Consensus 597 lpS~~Egfp~vlLEAMA~----G~PVVat~~gG~~EiV~dg~~GlLv~~~d~~~~~La~aL~~ll~~l~-~~~~l~~~ar 671 (694)
T PRK15179 597 LLSRFEGLPNVLIEAQFS----GVPVVTTLAGGAGEAVQEGVTGLTLPADTVTAPDVAEALARIHDMCA-ADPGIARKAA 671 (694)
T ss_pred eccccccchHHHHHHHHc----CCeEEEECCCChHHHccCCCCEEEeCCCCCChHHHHHHHHHHHhChh-ccHHHHHHHH
Confidence 999999999999999999 3578899988988888 678999998885 689999988886533 2233445667
Q ss_pred HHH-HhcCHHHHHHHHHHH
Q 002285 552 MHV-TTHTSQEWAATFVSE 569 (942)
Q Consensus 552 ~~v-~~~~~~~W~~~fl~~ 569 (942)
+++ +.|++...++.+++.
T Consensus 672 ~~a~~~FS~~~~~~~~~~l 690 (694)
T PRK15179 672 DWASARFSLNQMIASTVRC 690 (694)
T ss_pred HHHHHhCCHHHHHHHHHHH
Confidence 766 578988888877654
No 47
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.88 E-value=3.1e-20 Score=210.05 Aligned_cols=277 Identities=18% Similarity=0.179 Sum_probs=192.3
Q ss_pred CCCEEEEcCCchhhHHHHHHhhC---CCCeEEEEeccCCCChhHhhcCCchHH-HHHHhhhccEEeecCHHHHHHHHHHH
Q 002285 242 EGDVVWCHDYHLMFLPQCLKEYN---NNMKVGWFLHTPFPSSEIHRTLPSRTE-LLRSVLAADLVGFHTYDYARHFVSAC 317 (942)
Q Consensus 242 ~~DiIwvHDyhL~llp~~Lr~~~---p~~~I~~flH~PfP~~e~fr~lp~r~~-il~~ll~aDlIgF~t~~~~~~Fl~~~ 317 (942)
.+|+||+|.+....++.++..+. .+.++.+++|..-.. ....-+.... +...+..+|.|...+......+.+.
T Consensus 84 ~~divh~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~--~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~- 160 (371)
T cd04962 84 KLDLLHVHYAVPHAVAAYLAREILGKKDLPVVTTLHGTDIT--LVGQDPSFQPATRFSIEKSDGVTAVSESLRQETYEL- 160 (371)
T ss_pred CccEEeecccCCccHHHHHHHHhcCcCCCcEEEEEcCCccc--cccccccchHHHHHHHhhCCEEEEcCHHHHHHHHHh-
Confidence 67999999876545555554322 257888888853111 1111111222 2334457899988887765554321
Q ss_pred HHHhccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHh---cCCceEEEeecccccCCHHHHHH
Q 002285 318 TRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERF---AGRKVMLGVDRLDMIKGIPQKIL 394 (942)
Q Consensus 318 ~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIl~VgRLd~~KGi~~lL~ 394 (942)
. +...++.++|+|+|...|.+... ...++++ .++++|+++||+.+.||+..+++
T Consensus 161 ---~------------~~~~~i~vi~n~~~~~~~~~~~~--------~~~~~~~~~~~~~~~il~~g~l~~~K~~~~li~ 217 (371)
T cd04962 161 ---F------------DITKEIEVIPNFVDEDRFRPKPD--------EALKRRLGAPEGEKVLIHISNFRPVKRIDDVIR 217 (371)
T ss_pred ---c------------CCcCCEEEecCCcCHhhcCCCch--------HHHHHhcCCCCCCeEEEEecccccccCHHHHHH
Confidence 1 12346889999999887754321 1122333 46788999999999999999999
Q ss_pred HHHHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEE
Q 002285 395 AFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVA 474 (942)
Q Consensus 395 Af~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~ 474 (942)
|+.++.++ +++ .|+.+ |+++....+ .+++.+.+.. ..|+|++ . .+++..+|+.||++
T Consensus 218 a~~~l~~~-~~~----~l~i~-----G~g~~~~~~----~~~~~~~~~~------~~v~~~g-~--~~~~~~~~~~~d~~ 274 (371)
T cd04962 218 IFAKVRKE-VPA----RLLLV-----GDGPERSPA----ERLARELGLQ------DDVLFLG-K--QDHVEELLSIADLF 274 (371)
T ss_pred HHHHHHhc-CCc----eEEEE-----cCCcCHHHH----HHHHHHcCCC------ceEEEec-C--cccHHHHHHhcCEE
Confidence 99988665 333 34444 344443333 3444433221 1255544 3 35799999999999
Q ss_pred EECCCCCCCChhHHHHHhhccCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhH
Q 002285 475 LVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVASSIGYALNMPADEREKRHLHNFM 552 (942)
Q Consensus 475 v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~ 552 (942)
|+||..||||++++|||+| +.|+|+|+.+|..+.+ |.+|++++|.|+++++++|..++++ ++++.++.+++++
T Consensus 275 v~ps~~E~~~~~~~EAma~----g~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~l~~~i~~l~~~-~~~~~~~~~~~~~ 349 (371)
T cd04962 275 LLPSEKESFGLAALEAMAC----GVPVVASNAGGIPEVVKHGETGFLVDVGDVEAMAEYALSLLED-DELWQEFSRAARN 349 (371)
T ss_pred EeCCCcCCCccHHHHHHHc----CCCEEEeCCCCchhhhcCCCceEEcCCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHH
Confidence 9999999999999999999 3589999999988877 5789999999999999999999975 4566677777887
Q ss_pred H-HHhcCHHHHHHHHHHHHHH
Q 002285 553 H-VTTHTSQEWAATFVSELND 572 (942)
Q Consensus 553 ~-v~~~~~~~W~~~fl~~L~~ 572 (942)
. ...|+++..++++++.+++
T Consensus 350 ~~~~~fs~~~~~~~~~~~y~~ 370 (371)
T cd04962 350 RAAERFDSERIVPQYEALYRR 370 (371)
T ss_pred HHHHhCCHHHHHHHHHHHHHh
Confidence 7 5789999999888876653
No 48
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=99.88 E-value=2.7e-20 Score=219.74 Aligned_cols=275 Identities=15% Similarity=0.094 Sum_probs=186.5
Q ss_pred cCCCCEEEEcCCchhhHHHHHHhhCCCCeEEEEeccCCCCh-hHhhcCC-c---hHHHHHHhhhccEEeecCHHHHHHHH
Q 002285 240 YEEGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSS-EIHRTLP-S---RTELLRSVLAADLVGFHTYDYARHFV 314 (942)
Q Consensus 240 ~~~~DiIwvHDyhL~llp~~Lr~~~p~~~I~~flH~PfP~~-e~fr~lp-~---r~~il~~ll~aDlIgF~t~~~~~~Fl 314 (942)
..++|+|+++-..... +.++ +..+.++++.++|.-.-.. ..-...+ | .+..+..+-.+|.|...|....+...
T Consensus 209 ~~~~di~i~dr~~~~~-~~~~-~~~~~~~~v~~lH~~h~~~~~~~~~~~~~~~~y~~~~~~~~~~D~iI~~S~~~~~~l~ 286 (500)
T TIGR02918 209 LTKKDIIILDRSTGIG-QAVL-ENKGPAKLGVVVHAEHFSESATNETYILWNNYYEYQFSNADYIDFFITATDIQNQILK 286 (500)
T ss_pred CCCCCEEEEcCCcccc-hHHH-hcCCCceEEEEEChhhhcCccCcchhHHHHHHHHHHHhchhhCCEEEECCHHHHHHHH
Confidence 4578999997655433 3333 5566899999999642100 0000000 1 12223444456777766654433332
Q ss_pred HHHHHHhccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHhcCCceEEEeecccccCCHHHHHH
Q 002285 315 SACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERFAGRKVMLGVDRLDMIKGIPQKIL 394 (942)
Q Consensus 315 ~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi~~lL~ 394 (942)
.... .+.+...+|.++|+|++...+.+. ....+..|++||||.+.||++.+|+
T Consensus 287 ~~~~------------~~~~~~~ki~viP~g~~~~~~~~~---------------~~r~~~~il~vGrl~~~Kg~~~li~ 339 (500)
T TIGR02918 287 NQFK------------KYYNIEPRIYTIPVGSLDELQYPE---------------QERKPFSIITASRLAKEKHIDWLVK 339 (500)
T ss_pred HHhh------------hhcCCCCcEEEEcCCCcccccCcc---------------cccCCeEEEEEeccccccCHHHHHH
Confidence 2111 122334678899999876543321 0123467999999999999999999
Q ss_pred HHHHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEE
Q 002285 395 AFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVA 474 (942)
Q Consensus 395 Af~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~ 474 (942)
|+.++.+++|+++ |+++ |+|++. +++++++.+.+.. + .|.| .|.. ++..+|+.||++
T Consensus 340 A~~~l~~~~p~~~----l~i~-----G~G~~~----~~l~~~i~~~~l~----~--~V~f-~G~~---~~~~~~~~adv~ 396 (500)
T TIGR02918 340 AVVKAKKSVPELT----FDIY-----GEGGEK----QKLQKIINENQAQ----D--YIHL-KGHR---NLSEVYKDYELY 396 (500)
T ss_pred HHHHHHhhCCCeE----EEEE-----ECchhH----HHHHHHHHHcCCC----C--eEEE-cCCC---CHHHHHHhCCEE
Confidence 9999999999854 4444 456543 4455565554321 1 2554 4543 678899999999
Q ss_pred EECCCCCCCChhHHHHHhhccCCCceEEEeCCC-Cccccc--CCceEEECC----CC----HHHHHHHHHHHhCCCHHHH
Q 002285 475 LVTSLRDGMNLVSYEFVACQASKKGVLILSEFA-GAAQSL--GAGAILVNP----WN----ITEVASSIGYALNMPADER 543 (942)
Q Consensus 475 v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~-G~~~~l--g~~gllVnP----~D----~~~lA~aI~~aL~m~~~er 543 (942)
|+||.+||||+|++||||| +.|+|+|+.. |..+.+ |.+|++|++ .| ++++|++|.++|+ ++++
T Consensus 397 v~pS~~Egfgl~~lEAma~----G~PVI~~dv~~G~~eiI~~g~nG~lv~~~~~~~d~~~~~~~la~~I~~ll~--~~~~ 470 (500)
T TIGR02918 397 LSASTSEGFGLTLMEAVGS----GLGMIGFDVNYGNPTFIEDNKNGYLIPIDEEEDDEDQIITALAEKIVEYFN--SNDI 470 (500)
T ss_pred EEcCccccccHHHHHHHHh----CCCEEEecCCCCCHHHccCCCCEEEEeCCccccchhHHHHHHHHHHHHHhC--hHHH
Confidence 9999999999999999999 3578888876 666766 789999984 33 8999999999994 4467
Q ss_pred HHHHHHHhHHHHhcCHHHHHHHHHHHHHH
Q 002285 544 EKRHLHNFMHVTTHTSQEWAATFVSELND 572 (942)
Q Consensus 544 ~~r~~~~~~~v~~~~~~~W~~~fl~~L~~ 572 (942)
.++.+++++.++.++...-++++.+.+++
T Consensus 471 ~~~~~~a~~~a~~fs~~~v~~~w~~ll~~ 499 (500)
T TIGR02918 471 DAFHEYSYQIAEGFLTANIIEKWKKLVRE 499 (500)
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhh
Confidence 77778889999999998888888766543
No 49
>PLN02949 transferase, transferring glycosyl groups
Probab=99.87 E-value=4.1e-20 Score=216.29 Aligned_cols=210 Identities=15% Similarity=0.144 Sum_probs=158.6
Q ss_pred eEEEEeeCccCccccchhcCChhhHHHHHHHHHHhcCCceEEEeecccccCCHHHHHHHHHHhHHhCCCCCCcEEEEEEE
Q 002285 337 TRVAAFPIGIDSDRFVRALELPQVQDHINELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPSWRDKVVLIQIA 416 (942)
Q Consensus 337 ~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi~~lL~Af~~ll~~~P~~~~~vvLvqi~ 416 (942)
.++.++++|+|.+.|..... ....++++++++||+.+.||+..+|+||++++++.++-..++.|+++|
T Consensus 243 ~~i~vvyp~vd~~~~~~~~~------------~~~~~~~~il~vGR~~~~Kg~~llI~A~~~l~~~~~~~~~~~~LvIvG 310 (463)
T PLN02949 243 ERIKRVYPPCDTSGLQALPL------------ERSEDPPYIISVAQFRPEKAHALQLEAFALALEKLDADVPRPKLQFVG 310 (463)
T ss_pred CCeEEEcCCCCHHHcccCCc------------cccCCCCEEEEEEeeeccCCHHHHHHHHHHHHHhccccCCCcEEEEEe
Confidence 36788999999876632110 011346789999999999999999999999887543211235577666
Q ss_pred cCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhccC
Q 002285 417 VPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQAS 496 (942)
Q Consensus 417 ~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~ 496 (942)
... .++..++.+++++++.+.+.. + .|.| .+.++.+++.++|+.||++|.||..||||++++|||||
T Consensus 311 ~~~---~~~~~~~~~eL~~la~~l~L~----~--~V~f-~g~v~~~el~~ll~~a~~~v~~s~~E~FGivvlEAMA~--- 377 (463)
T PLN02949 311 SCR---NKEDEERLQKLKDRAKELGLD----G--DVEF-HKNVSYRDLVRLLGGAVAGLHSMIDEHFGISVVEYMAA--- 377 (463)
T ss_pred CCC---CcccHHHHHHHHHHHHHcCCC----C--cEEE-eCCCCHHHHHHHHHhCcEEEeCCccCCCChHHHHHHHc---
Confidence 431 112223445666666654322 1 2655 57899999999999999999999999999999999999
Q ss_pred CCceEEEeCCCCccc-cc-----CCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHHhcCHHHHHHHHHHHH
Q 002285 497 KKGVLILSEFAGAAQ-SL-----GAGAILVNPWNITEVASSIGYALNMPADEREKRHLHNFMHVTTHTSQEWAATFVSEL 570 (942)
Q Consensus 497 ~~G~lIlSe~~G~~~-~l-----g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~L 570 (942)
+.|+|+++.+|..+ .+ |.+|++++ |++++|++|.+++++++++++++.+++++.+++|+.+..++++++.+
T Consensus 378 -G~PVIa~~~gGp~~eIV~~~~~g~tG~l~~--~~~~la~ai~~ll~~~~~~r~~m~~~ar~~~~~FS~e~~~~~~~~~i 454 (463)
T PLN02949 378 -GAVPIAHNSAGPKMDIVLDEDGQQTGFLAT--TVEEYADAILEVLRMRETERLEIAAAARKRANRFSEQRFNEDFKDAI 454 (463)
T ss_pred -CCcEEEeCCCCCcceeeecCCCCcccccCC--CHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHH
Confidence 34799999888653 33 35688874 99999999999999888888888888999999999999999998887
Q ss_pred HHhH
Q 002285 571 NDTI 574 (942)
Q Consensus 571 ~~~~ 574 (942)
....
T Consensus 455 ~~l~ 458 (463)
T PLN02949 455 RPIL 458 (463)
T ss_pred HHHH
Confidence 7653
No 50
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=99.87 E-value=4.8e-20 Score=210.65 Aligned_cols=284 Identities=18% Similarity=0.176 Sum_probs=187.0
Q ss_pred CCCCEEEEcCCchhhHHHHHHhhCCCCeEEEEeccCCCChhHhhcCCchHHHHH---------HhhhccEEeecCHHHHH
Q 002285 241 EEGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSSEIHRTLPSRTELLR---------SVLAADLVGFHTYDYAR 311 (942)
Q Consensus 241 ~~~DiIwvHDyhL~llp~~Lr~~~p~~~I~~flH~PfP~~e~fr~lp~r~~il~---------~ll~aDlIgF~t~~~~~ 311 (942)
...|+|++|+..... + +++...+ .++++.+|.| .......-.+...+.+ .+..+|.|...+.....
T Consensus 93 ~~~Dvi~~~~~~~~~-~-~~~~~~~-~~~i~~~h~~--~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~ii~~s~~~~~ 167 (392)
T cd03805 93 EKYDVFIVDQVSACV-P-LLKLFSP-SKILFYCHFP--DQLLAQRGSLLKRLYRKPFDWLEEFTTGMADKIVVNSNFTAS 167 (392)
T ss_pred CCCCEEEEcCcchHH-H-HHHHhcC-CcEEEEEecC--hHHhcCCCcHHHHHHHHHHHHHHHHHhhCceEEEEcChhHHH
Confidence 478999999865432 2 3333333 7889999954 2211110001111111 12346777665544333
Q ss_pred HHHHHHHHHhccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHhcCCceEEEeecccccCCHHH
Q 002285 312 HFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERFAGRKVMLGVDRLDMIKGIPQ 391 (942)
Q Consensus 312 ~Fl~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi~~ 391 (942)
.+.. .++ ......+.++|+|||.+.|.+..... ........++.++|+++||+.+.||++.
T Consensus 168 ~~~~----~~~----------~~~~~~~~vi~n~vd~~~~~~~~~~~-----~~~~~~~~~~~~~i~~~grl~~~Kg~~~ 228 (392)
T cd03805 168 VFKK----TFP----------SLAKNPREVVYPCVDTDSFESTSEDP-----DPGLLIPKSGKKTFLSINRFERKKNIAL 228 (392)
T ss_pred HHHH----Hhc----------ccccCCcceeCCCcCHHHcCcccccc-----cccccccCCCceEEEEEeeecccCChHH
Confidence 3321 111 00112335899999998886532211 0011112356788999999999999999
Q ss_pred HHHHHHHhHHhC---CCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHh-hccccCCcCcccEEEeCCCCCHHHHHHH
Q 002285 392 KILAFEKFLEEN---PSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGR-INGRYGTLTTVPIHHLDRSLDFHALCAL 467 (942)
Q Consensus 392 lL~Af~~ll~~~---P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~-IN~~~~~~~~~pV~~l~~~v~~~el~al 467 (942)
+|+|++++.+++ |+ +.|+.+|.... ..+...++.+++++++.+ .+.. ..|+| .|.++.+++..+
T Consensus 229 ll~a~~~l~~~~~~~~~----~~l~i~G~~~~-~~~~~~~~~~~l~~~~~~~~~l~------~~V~f-~g~~~~~~~~~~ 296 (392)
T cd03805 229 AIEAFAILKDKLAEFKN----VRLVIAGGYDP-RVAENVEYLEELQRLAEELLLLE------DQVIF-LPSISDSQKELL 296 (392)
T ss_pred HHHHHHHHHhhcccccC----eEEEEEcCCCC-CCchhHHHHHHHHHHHHHhcCCC------ceEEE-eCCCChHHHHHH
Confidence 999999998876 66 45666653221 111222345566666655 3221 13554 578999999999
Q ss_pred HHHccEEEECCCCCCCChhHHHHHhhccCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHhCCCHHHHHH
Q 002285 468 YAITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVASSIGYALNMPADEREK 545 (942)
Q Consensus 468 y~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~ 545 (942)
|+.||++++||..||||++++||||| +.|+|+|+.+|..+.+ +.+|+++++ |.+++|++|.++++++ +.+.+
T Consensus 297 l~~ad~~l~~s~~E~~g~~~lEAma~----G~PvI~s~~~~~~e~i~~~~~g~~~~~-~~~~~a~~i~~l~~~~-~~~~~ 370 (392)
T cd03805 297 LSSARALLYTPSNEHFGIVPLEAMYA----GKPVIACNSGGPLETVVDGETGFLCEP-TPEEFAEAMLKLANDP-DLADR 370 (392)
T ss_pred HhhCeEEEECCCcCCCCchHHHHHHc----CCCEEEECCCCcHHHhccCCceEEeCC-CHHHHHHHHHHHHhCh-HHHHH
Confidence 99999999999999999999999999 3579999988888777 467999987 9999999999999875 46667
Q ss_pred HHHHHhHHH-HhcCHHHHHHHH
Q 002285 546 RHLHNFMHV-TTHTSQEWAATF 566 (942)
Q Consensus 546 r~~~~~~~v-~~~~~~~W~~~f 566 (942)
+.+++++++ ..|+++.++++|
T Consensus 371 ~~~~a~~~~~~~~s~~~~~~~~ 392 (392)
T cd03805 371 MGAAGRKRVKEKFSTEAFAERL 392 (392)
T ss_pred HHHHHHHHHHHhcCHHHHhhhC
Confidence 777788876 668888877653
No 51
>PRK10307 putative glycosyl transferase; Provisional
Probab=99.87 E-value=4.8e-20 Score=213.20 Aligned_cols=285 Identities=14% Similarity=0.114 Sum_probs=195.7
Q ss_pred CCCCEEEEcCCchhhH-H-HHHHhhCCCCeEEEEeccCCCChhHh-hcCC--ch----HHHHHH-hhhccEEeecCHHHH
Q 002285 241 EEGDVVWCHDYHLMFL-P-QCLKEYNNNMKVGWFLHTPFPSSEIH-RTLP--SR----TELLRS-VLAADLVGFHTYDYA 310 (942)
Q Consensus 241 ~~~DiIwvHDyhL~ll-p-~~Lr~~~p~~~I~~flH~PfP~~e~f-r~lp--~r----~~il~~-ll~aDlIgF~t~~~~ 310 (942)
.++|+||+|...+... . .++++ ..+.++++..|--+|..-+- ...+ .. ..+.+. +..+|.|...+....
T Consensus 105 ~~~Div~~~~p~~~~~~~~~~~~~-~~~~~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~ 183 (412)
T PRK10307 105 WRPDRVIGVVPTLFCAPGARLLAR-LSGARTWLHIQDYEVDAAFGLGLLKGGKVARLATAFERSLLRRFDNVSTISRSMM 183 (412)
T ss_pred CCCCEEEEeCCcHHHHHHHHHHHH-hhCCCEEEEeccCCHHHHHHhCCccCcHHHHHHHHHHHHHHhhCCEEEecCHHHH
Confidence 4689999998665432 2 33343 33567777777555422110 0010 00 111122 235788877776655
Q ss_pred HHHHHHHHHHhccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHh---cCCceEEEeecccccC
Q 002285 311 RHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERF---AGRKVMLGVDRLDMIK 387 (942)
Q Consensus 311 ~~Fl~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIl~VgRLd~~K 387 (942)
+.+.+ +.....++.++|||||.+.|.+.... ....+++++ .++++|+++||+.+.|
T Consensus 184 ~~~~~----------------~~~~~~~i~vi~ngvd~~~~~~~~~~-----~~~~~~~~~~~~~~~~~i~~~G~l~~~k 242 (412)
T PRK10307 184 NKARE----------------KGVAAEKVIFFPNWSEVARFQPVADA-----DVDALRAQLGLPDGKKIVLYSGNIGEKQ 242 (412)
T ss_pred HHHHH----------------cCCCcccEEEECCCcCHhhcCCCCcc-----chHHHHHHcCCCCCCEEEEEcCcccccc
Confidence 54432 11234578899999999988754211 112345555 3567899999999999
Q ss_pred CHHHHHHHHHHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHH
Q 002285 388 GIPQKILAFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCAL 467 (942)
Q Consensus 388 Gi~~lL~Af~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~al 467 (942)
|+..+|+|++++ +++|++ .|+++ |+|+.. +++++++.+.+. ..|+| .|.++.+++..+
T Consensus 243 g~~~li~a~~~l-~~~~~~----~l~iv-----G~g~~~----~~l~~~~~~~~l-------~~v~f-~G~~~~~~~~~~ 300 (412)
T PRK10307 243 GLELVIDAARRL-RDRPDL----IFVIC-----GQGGGK----ARLEKMAQCRGL-------PNVHF-LPLQPYDRLPAL 300 (412)
T ss_pred CHHHHHHHHHHh-ccCCCe----EEEEE-----CCChhH----HHHHHHHHHcCC-------CceEE-eCCCCHHHHHHH
Confidence 999999999877 445664 45555 566643 345555544332 13655 578999999999
Q ss_pred HHHccEEEECCCCCCC----ChhHHHHHhhccCCCceEEEeCCCCc--ccccCCceEEECCCCHHHHHHHHHHHhCCCHH
Q 002285 468 YAITDVALVTSLRDGM----NLVSYEFVACQASKKGVLILSEFAGA--AQSLGAGAILVNPWNITEVASSIGYALNMPAD 541 (942)
Q Consensus 468 y~~ADv~v~pSl~EG~----~Lv~lEamA~~~~~~G~lIlSe~~G~--~~~lg~~gllVnP~D~~~lA~aI~~aL~m~~~ 541 (942)
|+.||++|+||..|++ +..++||||| +.|+|+|+.+|. .+.+..+|++++|.|++++|++|.+++++ ++
T Consensus 301 ~~~aDi~v~ps~~e~~~~~~p~kl~eama~----G~PVi~s~~~g~~~~~~i~~~G~~~~~~d~~~la~~i~~l~~~-~~ 375 (412)
T PRK10307 301 LKMADCHLLPQKAGAADLVLPSKLTNMLAS----GRNVVATAEPGTELGQLVEGIGVCVEPESVEALVAAIAALARQ-AL 375 (412)
T ss_pred HHhcCEeEEeeccCcccccCcHHHHHHHHc----CCCEEEEeCCCchHHHHHhCCcEEeCCCCHHHHHHHHHHHHhC-HH
Confidence 9999999999999994 5557999999 357888887764 34445689999999999999999999876 45
Q ss_pred HHHHHHHHHhHHHH-hcCHHHHHHHHHHHHHHhH
Q 002285 542 EREKRHLHNFMHVT-THTSQEWAATFVSELNDTI 574 (942)
Q Consensus 542 er~~r~~~~~~~v~-~~~~~~W~~~fl~~L~~~~ 574 (942)
++..+.+++++++. +|+++..+++|++.+++..
T Consensus 376 ~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~ 409 (412)
T PRK10307 376 LRPKLGTVAREYAERTLDKENVLRQFIADIRGLV 409 (412)
T ss_pred HHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHh
Confidence 77777788888875 6999999999999888654
No 52
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=99.87 E-value=1.8e-20 Score=210.42 Aligned_cols=253 Identities=18% Similarity=0.106 Sum_probs=170.0
Q ss_pred CCCCEEEEcCCchhhHHHHHHhhCCCCeEEEEeccCCCChhHhhcCCchHHHHH-HhhhccEEeecCHHHHHHHHHHHHH
Q 002285 241 EEGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSSEIHRTLPSRTELLR-SVLAADLVGFHTYDYARHFVSACTR 319 (942)
Q Consensus 241 ~~~DiIwvHDyhL~llp~~Lr~~~p~~~I~~flH~PfP~~e~fr~lp~r~~il~-~ll~aDlIgF~t~~~~~~Fl~~~~r 319 (942)
.++|+|++|..+...++.++.+......+.+..|..+...+.+........+.. .+..+|.+...+....+.+...
T Consensus 79 ~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~~--- 155 (358)
T cd03812 79 NKYDIVHVHGSSASGFILLAAKKAGVKVRIAHSHNTSDSHDKKKKILKYKVLRKLINRLATDYLACSEEAGKWLFGK--- 155 (358)
T ss_pred CCCCEEEEeCcchhHHHHHHHhhCCCCeEEEEeccccccccccchhhHHHHHHHHHHhcCCEEEEcCHHHHHHHHhC---
Confidence 378999999988766777666655555666777876544332221111000111 1223566555444333322210
Q ss_pred HhccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHh---cCCceEEEeecccccCCHHHHHHHH
Q 002285 320 ILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERF---AGRKVMLGVDRLDMIKGIPQKILAF 396 (942)
Q Consensus 320 ~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIl~VgRLd~~KGi~~lL~Af 396 (942)
....++.++|+|||.+.|...... .+. ++.+ .++++|+++||+.+.||++.+++|+
T Consensus 156 --------------~~~~~~~vi~ngvd~~~~~~~~~~---~~~----~~~~~~~~~~~~i~~vGr~~~~Kg~~~li~a~ 214 (358)
T cd03812 156 --------------VKNKKFKVIPNGIDLEKFIFNEEI---RKK----RRELGILEDKFVIGHVGRFSEQKNHEFLIEIF 214 (358)
T ss_pred --------------CCcccEEEEeccCcHHHcCCCchh---hhH----HHHcCCCCCCEEEEEEeccccccChHHHHHHH
Confidence 124578899999999887653211 111 2222 4678999999999999999999999
Q ss_pred HHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEE
Q 002285 397 EKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALV 476 (942)
Q Consensus 397 ~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~ 476 (942)
..+.+++|+++ ++++ |+++....++ +++.+.+.. ..|+++ +. .+++..+|+.||++|+
T Consensus 215 ~~l~~~~~~~~----l~iv-----G~g~~~~~~~----~~~~~~~~~------~~v~~~-g~--~~~~~~~~~~adi~v~ 272 (358)
T cd03812 215 AELLKKNPNAK----LLLV-----GDGELEEEIK----KKVKELGLE------DKVIFL-GV--RNDVPELLQAMDVFLF 272 (358)
T ss_pred HHHHHhCCCeE----EEEE-----eCCchHHHHH----HHHHhcCCC------CcEEEe-cc--cCCHHHHHHhcCEEEe
Confidence 99999988854 5544 4555433333 333333211 135554 43 6789999999999999
Q ss_pred CCCCCCCChhHHHHHhhccCCCceEEEeCCCCcccccCC-ceEEECCCCHHHHHHHHHHHhCCCHHHH
Q 002285 477 TSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSLGA-GAILVNPWNITEVASSIGYALNMPADER 543 (942)
Q Consensus 477 pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~lg~-~gllVnP~D~~~lA~aI~~aL~m~~~er 543 (942)
||..||||++++||||| +.|+|+|+.+|..+.++. .+++..+.+++++|++|.++++++...+
T Consensus 273 ps~~E~~~~~~lEAma~----G~PvI~s~~~~~~~~i~~~~~~~~~~~~~~~~a~~i~~l~~~~~~~~ 336 (358)
T cd03812 273 PSLYEGLPLVLIEAQAS----GLPCILSDTITKEVDLTDLVKFLSLDESPEIWAEEILKLKSEDRRER 336 (358)
T ss_pred cccccCCCHHHHHHHHh----CCCEEEEcCCchhhhhccCccEEeCCCCHHHHHHHHHHHHhCcchhh
Confidence 99999999999999999 367999999998888843 4556666778999999999999876443
No 53
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=99.87 E-value=2.7e-20 Score=216.11 Aligned_cols=275 Identities=16% Similarity=0.172 Sum_probs=182.3
Q ss_pred CCCEEEEcCCchhhHHHHHHhhCCCCeEEEEeccCCCChhHhhcC-------------CchH--HH-----------H--
Q 002285 242 EGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSSEIHRTL-------------PSRT--EL-----------L-- 293 (942)
Q Consensus 242 ~~DiIwvHDyhL~llp~~Lr~~~p~~~I~~flH~PfP~~e~fr~l-------------p~r~--~i-----------l-- 293 (942)
.+|+|..|--+.. +-.+.+..+++++++.+|-|.-+.+.+..+ ..+. .+ +
T Consensus 107 ~pDv~i~~~g~~~--~~~~~~~~~~~~~i~y~h~P~~~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~k~~y~~~~~~~~~ 184 (419)
T cd03806 107 VPDIFIDTMGYPF--TYPLVRLLGGCPVGAYVHYPTISTDMLQKVRSREASYNNSATIARSPVLSKAKLLYYRLFAFLYG 184 (419)
T ss_pred CCCEEEEcCCccc--HHHHHHHhcCCeEEEEecCCcchHHHHHHHhhccccccCccchhccchHHHHHHHHHHHHHHHHH
Confidence 4686665532222 223445556889999999554344544221 1100 01 1
Q ss_pred HHhhhccEEeecCHHHHHHHHHHHHHHhccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHhcC
Q 002285 294 RSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERFAG 373 (942)
Q Consensus 294 ~~ll~aDlIgF~t~~~~~~Fl~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~ 373 (942)
-.+..||.|...+.....++.+ . .+...++.++|+|+|.+.|.+... ....+
T Consensus 185 ~~~~~aD~ii~~S~~~~~~~~~----~------------~~~~~~~~vi~~gvd~~~~~~~~~------------~~~~~ 236 (419)
T cd03806 185 LAGSFADVVMVNSTWTRNHIRS----L------------WKRNTKPSIVYPPCDVEELLKLPL------------DEKTR 236 (419)
T ss_pred HHhhcCCEEEECCHHHHHHHHH----H------------hCcCCCcEEEcCCCCHHHhccccc------------ccccC
Confidence 1123466666555433333321 1 112236889999999987764311 01235
Q ss_pred CceEEEeecccccCCHHHHHHHHHHhHHhCCCC-CCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccE
Q 002285 374 RKVMLGVDRLDMIKGIPQKILAFEKFLEENPSW-RDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPI 452 (942)
Q Consensus 374 ~~iIl~VgRLd~~KGi~~lL~Af~~ll~~~P~~-~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV 452 (942)
+++|+++||+.+.||+..+|+||.++.+..|+. +.++.|+++|.... ++..++.+++++++.+.+.. ..|
T Consensus 237 ~~~il~vgr~~~~K~~~~li~A~~~l~~~~~~~~~~~~~lvivG~~~~---~~~~~~~~~L~~~~~~l~l~------~~V 307 (419)
T cd03806 237 ENQILSIAQFRPEKNHPLQLRAFAKLLKRLPEEIKEKIKLVLIGSCRN---EDDEKRVEDLKLLAKELGLE------DKV 307 (419)
T ss_pred CcEEEEEEeecCCCCHHHHHHHHHHHHHhCcccccCceEEEEEcCCCC---cccHHHHHHHHHHHHHhCCC------CeE
Confidence 679999999999999999999999999887752 12366776663211 11123456677777665432 125
Q ss_pred EEeCCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhccCCCceEEEeCCCCccc-cc-----CCceEEECCCCHH
Q 002285 453 HHLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQ-SL-----GAGAILVNPWNIT 526 (942)
Q Consensus 453 ~~l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~-~l-----g~~gllVnP~D~~ 526 (942)
+| .+.++.+++..+|+.||++|+||..||||++++||||| +.|+|+|+.+|..+ .+ |.+|++++ |++
T Consensus 308 ~f-~g~v~~~~l~~~l~~adv~v~~s~~E~Fgi~~lEAMa~----G~pvIa~~~ggp~~~iv~~~~~g~~G~l~~--d~~ 380 (419)
T cd03806 308 EF-VVNAPFEELLEELSTASIGLHTMWNEHFGIGVVEYMAA----GLIPLAHASGGPLLDIVVPWDGGPTGFLAS--TAE 380 (419)
T ss_pred EE-ecCCCHHHHHHHHHhCeEEEECCccCCcccHHHHHHHc----CCcEEEEcCCCCchheeeccCCCCceEEeC--CHH
Confidence 54 57899999999999999999999999999999999999 34688888877654 33 46899974 999
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHhHHHHhcCHHHH
Q 002285 527 EVASSIGYALNMPADEREKRHLHNFMHVTTHTSQEW 562 (942)
Q Consensus 527 ~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~~~~~W 562 (942)
++|++|.++++++++++..+.+..+...++|+.+..
T Consensus 381 ~la~ai~~ll~~~~~~~~~~~~~~~~~~~~fs~~~f 416 (419)
T cd03806 381 EYAEAIEKILSLSEEERLRIRRAARSSVKRFSDEEF 416 (419)
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhCHHHh
Confidence 999999999999877666654555555577776654
No 54
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=99.86 E-value=1.7e-19 Score=208.77 Aligned_cols=272 Identities=14% Similarity=0.100 Sum_probs=190.9
Q ss_pred CCCEEEEcCCchhh-HHHHHHhhCCCCeEEEEeccCCCChhHhhcCCchHHHHHH-hhhccEEeecCHHHHHHHHHHHHH
Q 002285 242 EGDVVWCHDYHLMF-LPQCLKEYNNNMKVGWFLHTPFPSSEIHRTLPSRTELLRS-VLAADLVGFHTYDYARHFVSACTR 319 (942)
Q Consensus 242 ~~DiIwvHDyhL~l-lp~~Lr~~~p~~~I~~flH~PfP~~e~fr~lp~r~~il~~-ll~aDlIgF~t~~~~~~Fl~~~~r 319 (942)
+.|+++.|-++... ...+++++....+++...|......+.+ .+....+.+. +..+|.|.+.+....+.+.+
T Consensus 127 ~~~v~~sy~~~~~~~~~~~l~~~~~~~~~i~~~Hg~d~~~~~~--~~~~~~~~~~~~~~~d~ii~~S~~~~~~l~~---- 200 (407)
T cd04946 127 QGTVFYSYWLHETAYALALLKKEYLRKRVISRAHGYDLYEDRY--PSGYIPLRRYLLSSLDAVFPCSEQGRNYLQK---- 200 (407)
T ss_pred CceEEEEecCchHHHHHHHHHHhcCCceEEEEeccchhhhhhc--cccchHHHHHHHhcCCEEEECCHHHHHHHHH----
Confidence 55677766544433 3345666666566788888632111111 1111112222 34689998888766554432
Q ss_pred HhccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHhcCCceEEEeecccccCCHHHHHHHHHHh
Q 002285 320 ILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKF 399 (942)
Q Consensus 320 ~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi~~lL~Af~~l 399 (942)
.+ .....++.++|+|+|...+.... ...+++.|+++||+.+.||++.+++|+.++
T Consensus 201 ~~-----------~~~~~ki~vi~~gv~~~~~~~~~--------------~~~~~~~il~~Grl~~~Kg~~~li~a~~~l 255 (407)
T cd04946 201 RY-----------PAYKEKIKVSYLGVSDPGIISKP--------------SKDDTLRIVSCSYLVPVKRVDLIIKALAAL 255 (407)
T ss_pred HC-----------CCccccEEEEECCcccccccCCC--------------CCCCCEEEEEeeccccccCHHHHHHHHHHH
Confidence 11 22345778999999987664320 113567899999999999999999999999
Q ss_pred HHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHH--ccEEEEC
Q 002285 400 LEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAI--TDVALVT 477 (942)
Q Consensus 400 l~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~--ADv~v~p 477 (942)
.+.+|+.. +.++.+ |+++.... +++++.+.+.. ..|+ +.|.++.+++.++|+. ||+|+.|
T Consensus 256 ~~~~p~~~--l~~~ii-----G~g~~~~~----l~~~~~~~~~~------~~V~-f~G~v~~~e~~~~~~~~~~~v~v~~ 317 (407)
T cd04946 256 AKARPSIK--IKWTHI-----GGGPLEDT----LKELAESKPEN------ISVN-FTGELSNSEVYKLYKENPVDVFVNL 317 (407)
T ss_pred HHhCCCce--EEEEEE-----eCchHHHH----HHHHHHhcCCC------ceEE-EecCCChHHHHHHHhhcCCCEEEeC
Confidence 99988765 666655 34554433 44444322111 1254 5689999999999986 7899999
Q ss_pred CCCCCCChhHHHHHhhccCCCceEEEeCCCCccccc--CCceEEECC-CCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHH
Q 002285 478 SLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSL--GAGAILVNP-WNITEVASSIGYALNMPADEREKRHLHNFMHV 554 (942)
Q Consensus 478 Sl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l--g~~gllVnP-~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v 554 (942)
|..||||++++||||| +.|+|+|+.+|..+.+ |.+|+++++ .|+++++++|.++++ +++++.++.+++++++
T Consensus 318 S~~Eg~p~~llEAma~----G~PVIas~vgg~~e~i~~~~~G~l~~~~~~~~~la~~I~~ll~-~~~~~~~m~~~ar~~~ 392 (407)
T cd04946 318 SESEGLPVSIMEAMSF----GIPVIATNVGGTPEIVDNGGNGLLLSKDPTPNELVSSLSKFID-NEEEYQTMREKAREKW 392 (407)
T ss_pred CccccccHHHHHHHHc----CCCEEeCCCCCcHHHhcCCCcEEEeCCCCCHHHHHHHHHHHHh-CHHHHHHHHHHHHHHH
Confidence 9999999999999999 3589999999988888 457899987 489999999999998 4567778888888887
Q ss_pred -HhcCHHHHHHHHH
Q 002285 555 -TTHTSQEWAATFV 567 (942)
Q Consensus 555 -~~~~~~~W~~~fl 567 (942)
+.|+.+.+.++|+
T Consensus 393 ~~~f~~~~~~~~~~ 406 (407)
T cd04946 393 EENFNASKNYREFA 406 (407)
T ss_pred HHHcCHHHhHHHhc
Confidence 6889999888875
No 55
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=99.85 E-value=9.9e-20 Score=203.43 Aligned_cols=276 Identities=17% Similarity=0.151 Sum_probs=196.0
Q ss_pred CCCCEEEEcCCchhhHHHHHHhhCCCCeEEEEeccCCCCh--hHhhc---CCchHHHHHHhhhccEEeecCHHHHHHHHH
Q 002285 241 EEGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSS--EIHRT---LPSRTELLRSVLAADLVGFHTYDYARHFVS 315 (942)
Q Consensus 241 ~~~DiIwvHDyhL~llp~~Lr~~~p~~~I~~flH~PfP~~--e~fr~---lp~r~~il~~ll~aDlIgF~t~~~~~~Fl~ 315 (942)
...|+||+|.+..... +....++.+.+|-.+|.. ..+.. ...+..+...+..+|.+.+.+...+..+.+
T Consensus 84 ~~~Dii~~~~~~~~~~------~~~~~~~i~~~hd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~~~~~~ 157 (365)
T cd03809 84 LGLDLLHSPHNTAPLL------RLRGVPVVVTIHDLIPLRFPEYFSPGFRRYFRRLLRRALRRADAIITVSEATKRDLLR 157 (365)
T ss_pred cCCCeeeecccccCcc------cCCCCCEEEEeccchhhhCcccCCHHHHHHHHHHHHHHHHHcCEEEEccHHHHHHHHH
Confidence 5789999999877655 455788888888655421 11110 011223344555788888877665555543
Q ss_pred HHHHHhccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHhcCCceEEEeecccccCCHHHHHHH
Q 002285 316 ACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERFAGRKVMLGVDRLDMIKGIPQKILA 395 (942)
Q Consensus 316 ~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi~~lL~A 395 (942)
. . .....++.++|+|+|...+..... +. ........++++|+++||+.+.||+..+++|
T Consensus 158 ~----~-----------~~~~~~~~vi~~~~~~~~~~~~~~-----~~-~~~~~~~~~~~~i~~~G~~~~~K~~~~~l~~ 216 (365)
T cd03809 158 Y----L-----------GVPPDKIVVIPLGVDPRFRPPPAE-----AE-VLRALYLLPRPYFLYVGTIEPRKNLERLLEA 216 (365)
T ss_pred H----h-----------CcCHHHEEeeccccCccccCCCch-----HH-HHHHhcCCCCCeEEEeCCCccccCHHHHHHH
Confidence 1 1 113457889999999987764321 11 1111223577899999999999999999999
Q ss_pred HHHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEE
Q 002285 396 FEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVAL 475 (942)
Q Consensus 396 f~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v 475 (942)
+..+.+.+|++ .|+++|... ..+......+ .+.+. ...+.+.+.++.+++..+|+.||+++
T Consensus 217 ~~~~~~~~~~~----~l~i~G~~~----~~~~~~~~~~----~~~~~-------~~~v~~~g~~~~~~~~~~~~~~d~~l 277 (365)
T cd03809 217 FARLPAKGPDP----KLVIVGKRG----WLNEELLARL----RELGL-------GDRVRFLGYVSDEELAALYRGARAFV 277 (365)
T ss_pred HHHHHHhcCCC----CEEEecCCc----cccHHHHHHH----HHcCC-------CCeEEECCCCChhHHHHHHhhhhhhc
Confidence 99999888754 355554221 1111122222 11111 12334578999999999999999999
Q ss_pred ECCCCCCCChhHHHHHhhccCCCceEEEeCCCCcccccCCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHH
Q 002285 476 VTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSLGAGAILVNPWNITEVASSIGYALNMPADEREKRHLHNFMHVT 555 (942)
Q Consensus 476 ~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~lg~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~ 555 (942)
+||..||+|++++|||+| +.|+|+|+.+|..+.++.+|+++++.|.++++++|.+++++ ++.+..+.+++++.+.
T Consensus 278 ~ps~~e~~~~~~~Ea~a~----G~pvI~~~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~l~~~-~~~~~~~~~~~~~~~~ 352 (365)
T cd03809 278 FPSLYEGFGLPVLEAMAC----GTPVIASNISSLPEVAGDAALYFDPLDPEALAAAIERLLED-PALREELRERGLARAK 352 (365)
T ss_pred ccchhccCCCCHHHHhcC----CCcEEecCCCCccceecCceeeeCCCCHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHH
Confidence 999999999999999999 35788888888777777889999999999999999999874 5677777788888899
Q ss_pred hcCHHHHHHHHH
Q 002285 556 THTSQEWAATFV 567 (942)
Q Consensus 556 ~~~~~~W~~~fl 567 (942)
.++++.++++++
T Consensus 353 ~~sw~~~~~~~~ 364 (365)
T cd03809 353 RFSWEKTARRTL 364 (365)
T ss_pred hCCHHHHHHHHh
Confidence 999999998875
No 56
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=99.85 E-value=1.5e-19 Score=201.22 Aligned_cols=279 Identities=18% Similarity=0.211 Sum_probs=183.3
Q ss_pred cCCCCEEEEcCCchh-hHHHHHHhhCCCCeEEEEeccCCCChhH-hhcCC---chHHH-HHHhhhccEEeecCHHHHHHH
Q 002285 240 YEEGDVVWCHDYHLM-FLPQCLKEYNNNMKVGWFLHTPFPSSEI-HRTLP---SRTEL-LRSVLAADLVGFHTYDYARHF 313 (942)
Q Consensus 240 ~~~~DiIwvHDyhL~-llp~~Lr~~~p~~~I~~flH~PfP~~e~-fr~lp---~r~~i-l~~ll~aDlIgF~t~~~~~~F 313 (942)
....|+|++|+.... ..+.....+..+.++.++.|..++.... +..+. ..... ...+..+|.|.+.+.......
T Consensus 85 ~~~~dii~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~ 164 (375)
T cd03821 85 IREADIVHVHGLWSYPSLAAARAARKYGIPYVVSPHGMLDPWALPHKALKKRLAWFLFERRLLQAAAAVHATSEQEAAEI 164 (375)
T ss_pred CCCCCEEEEecccchHHHHHHHHHHHhCCCEEEEccccccccccccchhhhHHHHHHHHHHHHhcCCEEEECCHHHHHHH
Confidence 357899999984332 2222222223467888888876654321 00000 00000 111223555655543322211
Q ss_pred HHHHHHHhccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHh---cCCceEEEeecccccCCHH
Q 002285 314 VSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERF---AGRKVMLGVDRLDMIKGIP 390 (942)
Q Consensus 314 l~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIl~VgRLd~~KGi~ 390 (942)
. ..+...++.++|+|+|.+.|..... ... ++.+ .++++|+++||+.+.||++
T Consensus 165 ~-----------------~~~~~~~~~vi~~~~~~~~~~~~~~---~~~-----~~~~~~~~~~~~i~~~G~~~~~K~~~ 219 (375)
T cd03821 165 R-----------------RLGLKAPIAVIPNGVDIPPFAALPS---RGR-----RRKFPILPDKRIILFLGRLHPKKGLD 219 (375)
T ss_pred H-----------------hhCCcccEEEcCCCcChhccCcchh---hhh-----hhhccCCCCCcEEEEEeCcchhcCHH
Confidence 1 1123457889999999988764321 000 2222 4678999999999999999
Q ss_pred HHHHHHHHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHH
Q 002285 391 QKILAFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAI 470 (942)
Q Consensus 391 ~lL~Af~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ 470 (942)
.+++|+.++.+++|+++ |+++|.. +. .+ ...++.++.+.+.. ..|+ +.+.++.+++..+|+.
T Consensus 220 ~li~a~~~l~~~~~~~~----l~i~G~~---~~-~~---~~~~~~~~~~~~~~------~~v~-~~g~~~~~~~~~~~~~ 281 (375)
T cd03821 220 LLIEAFAKLAERFPDWH----LVIAGPD---EG-GY---RAELKQIAAALGLE------DRVT-FTGMLYGEDKAAALAD 281 (375)
T ss_pred HHHHHHHHhhhhcCCeE----EEEECCC---Cc-ch---HHHHHHHHHhcCcc------ceEE-EcCCCChHHHHHHHhh
Confidence 99999999998888754 5545421 11 12 22233333333211 1244 5789999999999999
Q ss_pred ccEEEECCCCCCCChhHHHHHhhccCCCceEEEeCCCCccccc-CCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHH
Q 002285 471 TDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSL-GAGAILVNPWNITEVASSIGYALNMPADEREKRHLH 549 (942)
Q Consensus 471 ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l-g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~ 549 (942)
||++++||..||||++++|||+| +.|+|+|+.+|..+.+ ...|++++ .+.++++++|.++++++ ++++.+.++
T Consensus 282 adv~v~ps~~e~~~~~~~Eama~----G~PvI~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~l~~~~-~~~~~~~~~ 355 (375)
T cd03821 282 ADLFVLPSHSENFGIVVAEALAC----GTPVVTTDKVPWQELIEYGCGWVVD-DDVDALAAALRRALELP-QRLKAMGEN 355 (375)
T ss_pred CCEEEeccccCCCCcHHHHHHhc----CCCEEEcCCCCHHHHhhcCceEEeC-CChHHHHHHHHHHHhCH-HHHHHHHHH
Confidence 99999999999999999999999 3579999988888877 34556655 45699999999999876 677777788
Q ss_pred HhHH-HHhcCHHHHHHHHH
Q 002285 550 NFMH-VTTHTSQEWAATFV 567 (942)
Q Consensus 550 ~~~~-v~~~~~~~W~~~fl 567 (942)
++++ .++++++..++.++
T Consensus 356 ~~~~~~~~~s~~~~~~~~~ 374 (375)
T cd03821 356 GRALVEERFSWTAIAQQLL 374 (375)
T ss_pred HHHHHHHhcCHHHHHHHhh
Confidence 8887 68888888887765
No 57
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=99.85 E-value=2.7e-19 Score=200.13 Aligned_cols=267 Identities=18% Similarity=0.160 Sum_probs=190.3
Q ss_pred CCCCEEEEcCCchhhHHHHHHhhCCCCeEEEEeccCCCChhHhhcCCchHHHHHHhhhccEEeecCHHHHHHHHHHHHHH
Q 002285 241 EEGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSSEIHRTLPSRTELLRSVLAADLVGFHTYDYARHFVSACTRI 320 (942)
Q Consensus 241 ~~~DiIwvHDyhL~llp~~Lr~~~p~~~I~~flH~PfP~~e~fr~lp~r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~ 320 (942)
.+.|+||+|..+...+..++..+....++.+.+|.+.. +.. +....+...+..+|.+...+....+.+.+.
T Consensus 78 ~~~Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~vi~~s~~~~~~l~~~---- 148 (355)
T cd03799 78 LGIDHIHAHFGTTPATVAMLASRLGGIPYSFTAHGKDI----FRS-PDAIDLDEKLARADFVVAISEYNRQQLIRL---- 148 (355)
T ss_pred cCCCEEEECCCCchHHHHHHHHHhcCCCEEEEEecccc----ccc-CchHHHHHHHhhCCEEEECCHHHHHHHHHh----
Confidence 36799999987655555555555557888888886421 111 111233344557999988887666655331
Q ss_pred hccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHhcCCceEEEeecccccCCHHHHHHHHHHhH
Q 002285 321 LGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFL 400 (942)
Q Consensus 321 l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi~~lL~Af~~ll 400 (942)
. .....++.++|+|+|.+.|.+.. .....++..|+++||+.+.||++.+++|++++.
T Consensus 149 ~-----------~~~~~~~~vi~~~~d~~~~~~~~------------~~~~~~~~~i~~~g~~~~~k~~~~l~~~~~~l~ 205 (355)
T cd03799 149 L-----------GCDPDKIHVVHCGVDLERFPPRP------------PPPPGEPLRILSVGRLVEKKGLDYLLEALALLK 205 (355)
T ss_pred c-----------CCCcccEEEEeCCcCHHHcCCcc------------ccccCCCeEEEEEeeeccccCHHHHHHHHHHHh
Confidence 1 12345788999999998776431 012245678999999999999999999999998
Q ss_pred HhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEECCCC
Q 002285 401 EENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVTSLR 480 (942)
Q Consensus 401 ~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~pSl~ 480 (942)
+.+|++ .|+.+| +++.. .++.+.+.+.+. .+.+.+.+.++.+++..+|+.||++++||..
T Consensus 206 ~~~~~~----~l~i~G-----~~~~~----~~~~~~~~~~~~-------~~~v~~~g~~~~~~l~~~~~~adi~l~~s~~ 265 (355)
T cd03799 206 DRGIDF----RLDIVG-----DGPLR----DELEALIAELGL-------EDRVTLLGAKSQEEVRELLRAADLFVLPSVT 265 (355)
T ss_pred hcCCCe----EEEEEE-----CCccH----HHHHHHHHHcCC-------CCeEEECCcCChHHHHHHHHhCCEEEeccee
Confidence 876664 455554 33332 233444444321 1223457889999999999999999999999
Q ss_pred ------CCCChhHHHHHhhccCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhH
Q 002285 481 ------DGMNLVSYEFVACQASKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVASSIGYALNMPADEREKRHLHNFM 552 (942)
Q Consensus 481 ------EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~ 552 (942)
||||++++|||+| +.|+|+|+.+|..+.+ +.+|+++++.|+++++++|.++++++ +++..+.+++++
T Consensus 266 ~~~~~~e~~~~~~~Ea~a~----G~Pvi~~~~~~~~~~i~~~~~g~~~~~~~~~~l~~~i~~~~~~~-~~~~~~~~~a~~ 340 (355)
T cd03799 266 AADGDREGLPVVLMEAMAM----GLPVISTDVSGIPELVEDGETGLLVPPGDPEALADAIERLLDDP-ELRREMGEAGRA 340 (355)
T ss_pred cCCCCccCccHHHHHHHHc----CCCEEecCCCCcchhhhCCCceEEeCCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHH
Confidence 9999999999999 3578888887777766 45799999999999999999999865 456667777777
Q ss_pred HH-HhcCHHHHHH
Q 002285 553 HV-TTHTSQEWAA 564 (942)
Q Consensus 553 ~v-~~~~~~~W~~ 564 (942)
.+ ..|++...++
T Consensus 341 ~~~~~~s~~~~~~ 353 (355)
T cd03799 341 RVEEEFDIRKQAA 353 (355)
T ss_pred HHHHhcCHHHHhh
Confidence 76 4577766554
No 58
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=99.85 E-value=6.4e-20 Score=208.49 Aligned_cols=279 Identities=19% Similarity=0.141 Sum_probs=187.6
Q ss_pred HHHHHHHHHHhhcCCCCEEEEcCCchhhHHHHHHhhCCCCeEEEEeccCCC-ChhHhhcCCc---hHHHHHHhhhccEEe
Q 002285 228 ANQMFAKVVNNIYEEGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFP-SSEIHRTLPS---RTELLRSVLAADLVG 303 (942)
Q Consensus 228 vN~~fa~~i~~~~~~~DiIwvHDyhL~llp~~Lr~~~p~~~I~~flH~PfP-~~e~fr~lp~---r~~il~~ll~aDlIg 303 (942)
+-+.|-+.+.. ..+.|+|++|..+.... .+.......++..++|...- ....-...++ .+.++..+..+|.|.
T Consensus 86 l~~~~l~~l~~-~~~~diii~~~~~~~~~--~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii 162 (372)
T cd04949 86 LFAFFLDELNK-DTKPDVFILDRPTLDGQ--ALLNMKKAAKVVVVLHSNHVSDNNDPVHSLINNFYEYVFENLDKVDGVI 162 (372)
T ss_pred HHHHHHHHHhc-CCCCCEEEECCccccch--hHHhccCCceEEEEEChHHhCCcccccccccchhhHHHHhChhhCCEEE
Confidence 33334444433 46889999998776654 22233334555666674321 1000000111 234445556788888
Q ss_pred ecCHHHHHHHHHHHHHHhccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHhcCCceEEEeecc
Q 002285 304 FHTYDYARHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERFAGRKVMLGVDRL 383 (942)
Q Consensus 304 F~t~~~~~~Fl~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRL 383 (942)
+.+....+.+... + +...++.++|+|++...+.+.. .....+..|+++||+
T Consensus 163 ~~s~~~~~~l~~~----~------------~~~~~v~~ip~g~~~~~~~~~~-------------~~~~~~~~i~~vgrl 213 (372)
T cd04949 163 VATEQQKQDLQKQ----F------------GNYNPIYTIPVGSIDPLKLPAQ-------------FKQRKPHKIITVARL 213 (372)
T ss_pred EccHHHHHHHHHH----h------------CCCCceEEEcccccChhhcccc-------------hhhcCCCeEEEEEcc
Confidence 8776655554321 1 1122378999999987765421 012356789999999
Q ss_pred cccCCHHHHHHHHHHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHH
Q 002285 384 DMIKGIPQKILAFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHA 463 (942)
Q Consensus 384 d~~KGi~~lL~Af~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~e 463 (942)
.+.||+..+|+|+.++.+++|+++ |+++| .++....++ .++.+.+.. + .|.+ .|. .++
T Consensus 214 ~~~K~~~~li~a~~~l~~~~~~~~----l~i~G-----~g~~~~~~~----~~~~~~~~~----~--~v~~-~g~--~~~ 271 (372)
T cd04949 214 APEKQLDQLIKAFAKVVKQVPDAT----LDIYG-----YGDEEEKLK----ELIEELGLE----D--YVFL-KGY--TRD 271 (372)
T ss_pred CcccCHHHHHHHHHHHHHhCCCcE----EEEEE-----eCchHHHHH----HHHHHcCCc----c--eEEE-cCC--CCC
Confidence 999999999999999999999865 44443 333333333 333333221 1 2444 443 467
Q ss_pred HHHHHHHccEEEECCCCCCCChhHHHHHhhccCCCceEEEeCCC-Cccccc--CCceEEECCCCHHHHHHHHHHHhCCCH
Q 002285 464 LCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFA-GAAQSL--GAGAILVNPWNITEVASSIGYALNMPA 540 (942)
Q Consensus 464 l~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~-G~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~ 540 (942)
+..+|+.||++|+||..||||++++|||+| +.|+|+++.. |..+.+ |.+|++++|.|++++|++|..+++++
T Consensus 272 ~~~~~~~ad~~v~~S~~Eg~~~~~lEAma~----G~PvI~~~~~~g~~~~v~~~~~G~lv~~~d~~~la~~i~~ll~~~- 346 (372)
T cd04949 272 LDEVYQKAQLSLLTSQSEGFGLSLMEALSH----GLPVISYDVNYGPSEIIEDGENGYLVPKGDIEALAEAIIELLNDP- 346 (372)
T ss_pred HHHHHhhhhEEEecccccccChHHHHHHhC----CCCEEEecCCCCcHHHcccCCCceEeCCCcHHHHHHHHHHHHcCH-
Confidence 999999999999999999999999999999 3578888876 666666 68999999999999999999999865
Q ss_pred HHHHHHHHHHhHHHHhcCHHHHHHH
Q 002285 541 DEREKRHLHNFMHVTTHTSQEWAAT 565 (942)
Q Consensus 541 ~er~~r~~~~~~~v~~~~~~~W~~~ 565 (942)
+.+.++.+++++...+|++..++++
T Consensus 347 ~~~~~~~~~a~~~~~~~s~~~~~~~ 371 (372)
T cd04949 347 KLLQKFSEAAYENAERYSEENVWEK 371 (372)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHhc
Confidence 5677777888888888888877654
No 59
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=99.85 E-value=1.7e-19 Score=201.65 Aligned_cols=280 Identities=18% Similarity=0.180 Sum_probs=190.9
Q ss_pred CCCEEEEcCCchhhH---HHHHH--hhCCCCeEEEEeccCCCChhHhhcCCchHHHHH-HhhhccEEeecCHHHHHHHHH
Q 002285 242 EGDVVWCHDYHLMFL---PQCLK--EYNNNMKVGWFLHTPFPSSEIHRTLPSRTELLR-SVLAADLVGFHTYDYARHFVS 315 (942)
Q Consensus 242 ~~DiIwvHDyhL~ll---p~~Lr--~~~p~~~I~~flH~PfP~~e~fr~lp~r~~il~-~ll~aDlIgF~t~~~~~~Fl~ 315 (942)
.+|+|++|.++-... ...+. .+..+.++.+.+|...+.... .....+.+ -+..+|.|.+.+.+.++.+..
T Consensus 76 ~~dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~----~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~ 151 (366)
T cd03822 76 GPDVVVIQHEYGIFGGEAGLYLLLLLRGLGIPVVVTLHTVLLHEPR----PGDRALLRLLLRRADAVIVMSSELLRALLL 151 (366)
T ss_pred CCCEEEEeeccccccchhhHHHHHHHhhcCCCEEEEEecCCccccc----hhhhHHHHHHHhcCCEEEEeeHHHHHHHHh
Confidence 679999988332111 11111 123578899999986222111 11112222 234689998886444444332
Q ss_pred HHHHHhccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHhcCCceEEEeecccccCCHHHHHHH
Q 002285 316 ACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERFAGRKVMLGVDRLDMIKGIPQKILA 395 (942)
Q Consensus 316 ~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi~~lL~A 395 (942)
. ....++.++|+|+|...+..... .+. .....++++|+++||+.+.||+..+++|
T Consensus 152 ~-----------------~~~~~~~~i~~~~~~~~~~~~~~-------~~~-~~~~~~~~~i~~~G~~~~~K~~~~ll~a 206 (366)
T cd03822 152 R-----------------AYPEKIAVIPHGVPDPPAEPPES-------LKA-LGGLDGRPVLLTFGLLRPYKGLELLLEA 206 (366)
T ss_pred h-----------------cCCCcEEEeCCCCcCcccCCchh-------hHh-hcCCCCCeEEEEEeeccCCCCHHHHHHH
Confidence 0 01357889999999876653211 011 1122467899999999999999999999
Q ss_pred HHHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEE
Q 002285 396 FEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVAL 475 (942)
Q Consensus 396 f~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v 475 (942)
++.+.+++|++ .|+.+|... +..........+++.+.+.. ..|.|+++.++.+++..+|+.||+++
T Consensus 207 ~~~~~~~~~~~----~l~i~G~~~----~~~~~~~~~~~~~i~~~~~~------~~v~~~~~~~~~~~~~~~~~~ad~~v 272 (366)
T cd03822 207 LPLLVAKHPDV----RLLVAGETH----PDLERYRGEAYALAERLGLA------DRVIFINRYLPDEELPELFSAADVVV 272 (366)
T ss_pred HHHHHhhCCCe----EEEEeccCc----cchhhhhhhhHhHHHhcCCC------CcEEEecCcCCHHHHHHHHhhcCEEE
Confidence 99999888775 455554211 11111111101223333221 13666666699999999999999999
Q ss_pred ECCCCC--CCChhHHHHHhhccCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHh
Q 002285 476 VTSLRD--GMNLVSYEFVACQASKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVASSIGYALNMPADEREKRHLHNF 551 (942)
Q Consensus 476 ~pSl~E--G~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~ 551 (942)
+||..| |++++++||||| +.|+|+|+.+| .+.+ +.+|+++++.|+++++++|..+++++ +.+.++.++++
T Consensus 273 ~ps~~e~~~~~~~~~Ea~a~----G~PvI~~~~~~-~~~i~~~~~g~~~~~~d~~~~~~~l~~l~~~~-~~~~~~~~~~~ 346 (366)
T cd03822 273 LPYRSADQTQSGVLAYAIGF----GKPVISTPVGH-AEEVLDGGTGLLVPPGDPAALAEAIRRLLADP-ELAQALRARAR 346 (366)
T ss_pred ecccccccccchHHHHHHHc----CCCEEecCCCC-hheeeeCCCcEEEcCCCHHHHHHHHHHHHcCh-HHHHHHHHHHH
Confidence 999999 999999999999 35788888888 6666 56899999999999999999999864 46677778889
Q ss_pred HHHHhcCHHHHHHHHHHHH
Q 002285 552 MHVTTHTSQEWAATFVSEL 570 (942)
Q Consensus 552 ~~v~~~~~~~W~~~fl~~L 570 (942)
+++++++++.+++.+++.+
T Consensus 347 ~~~~~~s~~~~~~~~~~~~ 365 (366)
T cd03822 347 EYARAMSWERVAERYLRLL 365 (366)
T ss_pred HHHhhCCHHHHHHHHHHHh
Confidence 9998999999999887654
No 60
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=99.85 E-value=5e-19 Score=196.17 Aligned_cols=278 Identities=19% Similarity=0.175 Sum_probs=189.0
Q ss_pred CCCEEEEcCCchhhHHHHHHhhCCCCeEEEEeccCCCChhHhhcCCc-hHHHHHHh-hhccEEeecCHHHHHHHHHHHHH
Q 002285 242 EGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSSEIHRTLPS-RTELLRSV-LAADLVGFHTYDYARHFVSACTR 319 (942)
Q Consensus 242 ~~DiIwvHDyhL~llp~~Lr~~~p~~~I~~flH~PfP~~e~fr~lp~-r~~il~~l-l~aDlIgF~t~~~~~~Fl~~~~r 319 (942)
++|+|++|+++......+........++.+..|..++... ...+. ...+..-+ ..+|.+...+......+..
T Consensus 80 ~~div~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~---- 153 (365)
T cd03807 80 RPDVVHTWMYHADLYGGLAARLAGVPPVIWGIRHSDLDLG--KKSTRLVARLRRLLSSFIPLIVANSAAAAEYHQA---- 153 (365)
T ss_pred CCCEEEeccccccHHHHHHHHhcCCCcEEEEecCCccccc--chhHhHHHHHHHHhccccCeEEeccHHHHHHHHH----
Confidence 6799999999877766666655467888888888665421 00111 11111111 2355554444332222221
Q ss_pred HhccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHh---cCCceEEEeecccccCCHHHHHHHH
Q 002285 320 ILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERF---AGRKVMLGVDRLDMIKGIPQKILAF 396 (942)
Q Consensus 320 ~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIl~VgRLd~~KGi~~lL~Af 396 (942)
+.....++.++|+|+|...|...... ...+++++ .++++|+++||+.+.||++.+++|+
T Consensus 154 ------------~~~~~~~~~vi~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~ 215 (365)
T cd03807 154 ------------IGYPPKKIVVIPNGVDTERFSPDLDA------RARLREELGLPEDTFLIGIVARLHPQKDHATLLRAA 215 (365)
T ss_pred ------------cCCChhheeEeCCCcCHHhcCCcccc------hHHHHHhcCCCCCCeEEEEecccchhcCHHHHHHHH
Confidence 11123577889999999877654221 12233344 3567889999999999999999999
Q ss_pred HHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEE
Q 002285 397 EKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALV 476 (942)
Q Consensus 397 ~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~ 476 (942)
..+.+++|++ .|+.+| .++....++.... ...+.. ..|.++ +. .+++..+|+.||++++
T Consensus 216 ~~l~~~~~~~----~l~i~G-----~~~~~~~~~~~~~---~~~~~~------~~v~~~-g~--~~~~~~~~~~adi~v~ 274 (365)
T cd03807 216 ALLLKKFPNA----RLLLVG-----DGPDRANLELLAL---KELGLE------DKVILL-GE--RSDVPALLNALDVFVL 274 (365)
T ss_pred HHHHHhCCCe----EEEEec-----CCcchhHHHHHHH---HhcCCC------ceEEEc-cc--cccHHHHHHhCCEEEe
Confidence 9999888775 455554 3332222222221 122111 124444 32 4689999999999999
Q ss_pred CCCCCCCChhHHHHHhhccCCCceEEEeCCCCcccccCCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHH-H
Q 002285 477 TSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSLGAGAILVNPWNITEVASSIGYALNMPADEREKRHLHNFMHV-T 555 (942)
Q Consensus 477 pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~lg~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v-~ 555 (942)
||..||+|++++|||+| +.|+|+|+.+|..+.+..+|+++++.|+++++++|.++++++ +++.++.+++++++ +
T Consensus 275 ps~~e~~~~~~~Ea~a~----g~PvI~~~~~~~~e~~~~~g~~~~~~~~~~l~~~i~~l~~~~-~~~~~~~~~~~~~~~~ 349 (365)
T cd03807 275 SSLSEGFPNVLLEAMAC----GLPVVATDVGDNAELVGDTGFLVPPGDPEALAEAIEALLADP-ALRQALGEAARERIEE 349 (365)
T ss_pred CCccccCCcHHHHHHhc----CCCEEEcCCCChHHHhhcCCEEeCCCCHHHHHHHHHHHHhCh-HHHHHHHHHHHHHHHH
Confidence 99999999999999999 357899998888887755799999999999999999999876 56667777777777 4
Q ss_pred hcCHHHHHHHHHHH
Q 002285 556 THTSQEWAATFVSE 569 (942)
Q Consensus 556 ~~~~~~W~~~fl~~ 569 (942)
.+++...+++|++.
T Consensus 350 ~~s~~~~~~~~~~~ 363 (365)
T cd03807 350 NFSIEAMVEAYEEL 363 (365)
T ss_pred hCCHHHHHHHHHHH
Confidence 58999888888764
No 61
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=99.85 E-value=5.7e-19 Score=197.17 Aligned_cols=280 Identities=16% Similarity=0.148 Sum_probs=195.9
Q ss_pred cCCCCEEEEcC-CchhhHHHHHHhhCCCCeEEEEeccCCCChhHhhcC-C-------chHHHH-HHhhhccEEeecCHHH
Q 002285 240 YEEGDVVWCHD-YHLMFLPQCLKEYNNNMKVGWFLHTPFPSSEIHRTL-P-------SRTELL-RSVLAADLVGFHTYDY 309 (942)
Q Consensus 240 ~~~~DiIwvHD-yhL~llp~~Lr~~~p~~~I~~flH~PfP~~e~fr~l-p-------~r~~il-~~ll~aDlIgF~t~~~ 309 (942)
..++|+|++|. ..+..++.....+..+.++.+.+|..+|........ . ....+. ..+..+|.+.+.+...
T Consensus 97 ~~~~D~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~s~~~ 176 (394)
T cd03794 97 RRRPDVIIATSPPLLIALAALLLARLKGAPFVLEVRDLWPESAVALGLLKNGSLLYRLLRKLERLIYRRADAIVVISPGM 176 (394)
T ss_pred ccCCCEEEEcCChHHHHHHHHHHHHhcCCCEEEEehhhcchhHHHccCccccchHHHHHHHHHHHHHhcCCEEEEECHHH
Confidence 35789999998 334444555444455789999999887753221111 1 011111 2334578888888777
Q ss_pred HHHHHHHHHHHhccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHhcCCceEEEeecccccCCH
Q 002285 310 ARHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERFAGRKVMLGVDRLDMIKGI 389 (942)
Q Consensus 310 ~~~Fl~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi 389 (942)
.+.+.. +.....++.++|+|+|...+.+..... ..... ....++.+|+++||+.+.||+
T Consensus 177 ~~~~~~----------------~~~~~~~~~~i~~~~~~~~~~~~~~~~----~~~~~-~~~~~~~~i~~~G~~~~~k~~ 235 (394)
T cd03794 177 REYLVR----------------RGVPPEKISVIPNGVDLELFKPPPADE----SLRKE-LGLDDKFVVLYAGNIGRAQGL 235 (394)
T ss_pred HHHHHh----------------cCCCcCceEEcCCCCCHHHcCCccchh----hhhhc-cCCCCcEEEEEecCcccccCH
Confidence 665541 112345788999999988776542211 01111 122467889999999999999
Q ss_pred HHHHHHHHHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHH
Q 002285 390 PQKILAFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYA 469 (942)
Q Consensus 390 ~~lL~Af~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~ 469 (942)
..+++|+.++.+. |++ .|+++ |+++....+++. +...+ ...|+++ +.++.+++..+|+
T Consensus 236 ~~l~~~~~~l~~~-~~~----~l~i~-----G~~~~~~~~~~~----~~~~~-------~~~v~~~-g~~~~~~~~~~~~ 293 (394)
T cd03794 236 DTLLEAAALLKDR-PDI----RFLIV-----GDGPEKEELKEL----AKALG-------LDNVTFL-GRVPKEELPELLA 293 (394)
T ss_pred HHHHHHHHHHhhc-CCe----EEEEe-----CCcccHHHHHHH----HHHcC-------CCcEEEe-CCCChHHHHHHHH
Confidence 9999999999776 664 45544 444443333332 22111 1236655 5899999999999
Q ss_pred HccEEEECCCCCCC-----ChhHHHHHhhccCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHhCCCHHH
Q 002285 470 ITDVALVTSLRDGM-----NLVSYEFVACQASKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVASSIGYALNMPADE 542 (942)
Q Consensus 470 ~ADv~v~pSl~EG~-----~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~e 542 (942)
.||++++||..|++ +++++|||+| +.|+|+|+.+|..+.+ +.+|+++++.|+++++++|.+++++ +++
T Consensus 294 ~~di~i~~~~~~~~~~~~~p~~~~Ea~~~----G~pvi~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~-~~~ 368 (394)
T cd03794 294 AADVGLVPLKPGPAFEGVSPSKLFEYMAA----GKPVLASVDGESAELVEEAGAGLVVPPGDPEALAAAILELLDD-PEE 368 (394)
T ss_pred hhCeeEEeccCcccccccCchHHHHHHHC----CCcEEEecCCCchhhhccCCcceEeCCCCHHHHHHHHHHHHhC-hHH
Confidence 99999999999876 7778999999 3579999999988887 3579999999999999999999964 567
Q ss_pred HHHHHHHHhHHHH-hcCHHHHHHHHH
Q 002285 543 REKRHLHNFMHVT-THTSQEWAATFV 567 (942)
Q Consensus 543 r~~r~~~~~~~v~-~~~~~~W~~~fl 567 (942)
+.++.+++++++. .|+++.++++++
T Consensus 369 ~~~~~~~~~~~~~~~~s~~~~~~~~~ 394 (394)
T cd03794 369 RAEMGENGRRYVEEKFSREKLAERLL 394 (394)
T ss_pred HHHHHHHHHHHHHHhhcHHHHHHhcC
Confidence 7777788888887 899999988763
No 62
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=99.85 E-value=3.8e-19 Score=198.12 Aligned_cols=264 Identities=21% Similarity=0.210 Sum_probs=183.0
Q ss_pred CCCEEEEcCCchhhHHHHHHhhCCCCeEEEEeccCCCChhHhhcCCchH---------HHH-HHhhhccEEeecCHHHHH
Q 002285 242 EGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSSEIHRTLPSRT---------ELL-RSVLAADLVGFHTYDYAR 311 (942)
Q Consensus 242 ~~DiIwvHDyhL~llp~~Lr~~~p~~~I~~flH~PfP~~e~fr~lp~r~---------~il-~~ll~aDlIgF~t~~~~~ 311 (942)
.+|+|++|+...+........+..+.++.+.+|.+++. +....+... .+. ..+..+|.|.+.+.....
T Consensus 84 ~~Div~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~s~~~~~ 161 (374)
T cd03817 84 GPDIVHTHTPFSLGLLGLRVARKLGIPVVATYHTMYED--YTHYVPLGRLLARAVVRRKLSRRFYNRCDAVIAPSEKIAD 161 (374)
T ss_pred CCCEEEECCchhhhhHHHHHHHHcCCCEEEEecCCHHH--HHHHHhcccchhHHHHHHHHHHHHhhhCCEEEeccHHHHH
Confidence 67999999875544333333334478899999988752 222211110 111 223357877776665443
Q ss_pred HHHHHHHHHhccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHh---cCCceEEEeecccccCC
Q 002285 312 HFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERF---AGRKVMLGVDRLDMIKG 388 (942)
Q Consensus 312 ~Fl~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIl~VgRLd~~KG 388 (942)
.+.. .+...++.++|+|+|...|.+.... . .++.+ .++++|+++||+.+.||
T Consensus 162 ~~~~-----------------~~~~~~~~vi~~~~~~~~~~~~~~~----~----~~~~~~~~~~~~~i~~~G~~~~~k~ 216 (374)
T cd03817 162 LLRE-----------------YGVKRPIEVIPTGIDLDRFEPVDGD----D----ERRKLGIPEDEPVLLYVGRLAKEKN 216 (374)
T ss_pred HHHh-----------------cCCCCceEEcCCccchhccCccchh----H----HHHhcCCCCCCeEEEEEeeeecccC
Confidence 3321 1123458899999999887653211 1 12222 45778999999999999
Q ss_pred HHHHHHHHHHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHH
Q 002285 389 IPQKILAFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALY 468 (942)
Q Consensus 389 i~~lL~Af~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly 468 (942)
++.+++|++.+.++++++ .|+.+| +++.. .++++++.+.+.. ..|. +.+.++.+++..+|
T Consensus 217 ~~~l~~~~~~~~~~~~~~----~l~i~G-----~~~~~----~~~~~~~~~~~~~------~~v~-~~g~~~~~~~~~~~ 276 (374)
T cd03817 217 IDFLIRAFARLLKEEPDV----KLVIVG-----DGPER----EELEELARELGLA------DRVI-FTGFVPREELPDYY 276 (374)
T ss_pred HHHHHHHHHHHHHhCCCe----EEEEEe-----CCchH----HHHHHHHHHcCCC------CcEE-EeccCChHHHHHHH
Confidence 999999999998877764 455553 44432 3344444433221 1244 56889999999999
Q ss_pred HHccEEEECCCCCCCChhHHHHHhhccCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHhCCCHHHHHHH
Q 002285 469 AITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVASSIGYALNMPADEREKR 546 (942)
Q Consensus 469 ~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r 546 (942)
+.||++++||..||+|++++|||+| +.|+|+++.++..+.+ +.+|+++++.|. +++++|.++++++. .++++
T Consensus 277 ~~ad~~l~~s~~e~~~~~~~Ea~~~----g~PvI~~~~~~~~~~i~~~~~g~~~~~~~~-~~~~~i~~l~~~~~-~~~~~ 350 (374)
T cd03817 277 KAADLFVFASTTETQGLVLLEAMAA----GLPVVAVDAPGLPDLVADGENGFLFPPGDE-ALAEALLRLLQDPE-LRRRL 350 (374)
T ss_pred HHcCEEEecccccCcChHHHHHHHc----CCcEEEeCCCChhhheecCceeEEeCCCCH-HHHHHHHHHHhChH-HHHHH
Confidence 9999999999999999999999999 3578888888877777 568999999888 99999999998764 45667
Q ss_pred HHHHhHHHHhcC
Q 002285 547 HLHNFMHVTTHT 558 (942)
Q Consensus 547 ~~~~~~~v~~~~ 558 (942)
.+++++.+.+++
T Consensus 351 ~~~~~~~~~~~~ 362 (374)
T cd03817 351 SKNAEESAEKFS 362 (374)
T ss_pred HHHHHHHHHHHH
Confidence 777888887766
No 63
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=99.85 E-value=6.7e-19 Score=204.82 Aligned_cols=310 Identities=13% Similarity=0.111 Sum_probs=187.1
Q ss_pred CCCCEEEEcCCchhhHHHHHHhhCCCCeEEEEeccCCCChh-------HhhcCC--------------chHHHHH-Hhhh
Q 002285 241 EEGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSSE-------IHRTLP--------------SRTELLR-SVLA 298 (942)
Q Consensus 241 ~~~DiIwvHDyhL~llp~~Lr~~~p~~~I~~flH~PfP~~e-------~fr~lp--------------~r~~il~-~ll~ 298 (942)
.+.|++|.||++......+||++.++++.+|+.|-.-.... ++..++ .+..+-+ ....
T Consensus 147 ~~~dViH~HeWm~g~a~~~lK~~~~~VptVfTtHAT~~GR~l~~g~~~~y~~l~~~~~d~eA~~~~I~~r~~iE~~aa~~ 226 (590)
T cd03793 147 EPAVVAHFHEWQAGVGLPLLRKRKVDVSTIFTTHATLLGRYLCAGNVDFYNNLDYFDVDKEAGKRGIYHRYCIERAAAHC 226 (590)
T ss_pred CCCeEEEEcchhHhHHHHHHHHhCCCCCEEEEecccccccccccCCcccchhhhhcchhhhhhcccchHHHHHHHHHHhh
Confidence 47899999999999889999988899999999996432211 111111 0000000 0111
Q ss_pred ccEEeecCHHHHHHHHHHHHHHhccccCCCceecCCeeeEEEEeeCccCccccchhcCCh----hhHHHHHH-----HHH
Q 002285 299 ADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELP----QVQDHINE-----LKE 369 (942)
Q Consensus 299 aDlIgF~t~~~~~~Fl~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~----~~~~~~~~-----lr~ 369 (942)
||.+..-+.-.++ -|. .+.+++..+ |+|||||++.|.+..... ..++++.+ ++.
T Consensus 227 Ad~fttVS~it~~----E~~------------~Ll~~~pd~-ViPNGid~~~f~~~~e~~~~~~~~k~ki~~f~~~~~~~ 289 (590)
T cd03793 227 AHVFTTVSEITAY----EAE------------HLLKRKPDV-VLPNGLNVKKFSALHEFQNLHAQSKEKINEFVRGHFYG 289 (590)
T ss_pred CCEEEECChHHHH----HHH------------HHhCCCCCE-EeCCCcchhhcccchhhhhhhHHhhhhhhHHHHHHHhh
Confidence 2222211110000 011 223333333 999999999987643210 11112222 344
Q ss_pred Hh---cCCceEEE-eecccc-cCCHHHHHHHHHHhHHhCCCC-CCcEEEEEEEcCCCCCh---------hHHHHHHHHHH
Q 002285 370 RF---AGRKVMLG-VDRLDM-IKGIPQKILAFEKFLEENPSW-RDKVVLIQIAVPTRTDV---------PEYQKLTSQVH 434 (942)
Q Consensus 370 ~~---~~~~iIl~-VgRLd~-~KGi~~lL~Af~~ll~~~P~~-~~~vvLvqi~~psrgd~---------~~y~~l~~~l~ 434 (942)
++ .+++++++ +||+++ .||++.+|+|+.++-..-..- .+.-|+..+..|....+ +-.++|++.+.
T Consensus 290 ~~~~~~d~tli~f~~GR~e~~nKGiDvlIeAl~rLn~~l~~~~~~~tVvafii~p~~~~~~~~~~l~g~~~~~~l~~~~~ 369 (590)
T cd03793 290 HYDFDLDKTLYFFTAGRYEFSNKGADMFLEALARLNYLLKVEGSDTTVVAFFIMPAKTNNFNVESLKGQAVRKQLRDTVN 369 (590)
T ss_pred hcCCCCCCeEEEEEeeccccccCCHHHHHHHHHHHHHHHHhcCCCCeEEEEEEecCccCCcCHHhhcchHHHHHHHHHHH
Confidence 44 26678888 799999 999999999999886521110 11234444455654331 22345555555
Q ss_pred HHHHhhccc--------------------------------------------------------------cCC-cCccc
Q 002285 435 EIVGRINGR--------------------------------------------------------------YGT-LTTVP 451 (942)
Q Consensus 435 ~lv~~IN~~--------------------------------------------------------------~~~-~~~~p 451 (942)
.+..+|+.+ +.. .+.+.
T Consensus 370 ~i~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~kr~~~~~~~~~~~p~~tH~~~~~~~D~il~~~r~~~l~N~~~drVk 449 (590)
T cd03793 370 SVKEKIGKRLFEAALKGKLPDLEELLDKEDKVMLKRRIFALQRHSLPPVVTHNMVDDANDPILNHIRRIQLFNSPEDRVK 449 (590)
T ss_pred HHHHHhhhhhhhHhhccCCCChhhhcchhhHHHHHHHHHhhccCCCCCeeeecCCcCccCHHHHHHHHhcCcCCCCCeEE
Confidence 554444333 100 12234
Q ss_pred EEEeCCCCCH------HHHHHHHHHccEEEECCCCCCCChhHHHHHhhccCCCceEEEeCCCCcc----cccC---CceE
Q 002285 452 IHHLDRSLDF------HALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAA----QSLG---AGAI 518 (942)
Q Consensus 452 V~~l~~~v~~------~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~----~~lg---~~gl 518 (942)
|+|...+++. .+...+|+.||+||+||++||||++++||||| +.|+|+|+.+|.. +.++ ..|+
T Consensus 450 vif~P~~L~~~~~~~g~~y~E~~~g~dl~v~PS~yE~fG~~~lEAma~----G~PvI~t~~~gf~~~v~E~v~~~~~~gi 525 (590)
T cd03793 450 VVFHPEFLSSTNPLLGLDYEEFVRGCHLGVFPSYYEPWGYTPAECTVM----GIPSITTNLSGFGCFMEEHIEDPESYGI 525 (590)
T ss_pred EEEcccccCCCCCcCCcchHHHhhhceEEEeccccCCCCcHHHHHHHc----CCCEEEccCcchhhhhHHHhccCCCceE
Confidence 5554433332 35788999999999999999999999999999 3579999998884 3333 3578
Q ss_pred EEC-------CCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHHhcCHHHHHHHHHHHHH
Q 002285 519 LVN-------PWNITEVASSIGYALNMPADEREKRHLHNFMHVTTHTSQEWAATFVSELN 571 (942)
Q Consensus 519 lVn-------P~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~L~ 571 (942)
+|. +.++++++++|.++++++..++........+....+++.+.+..+++.-.
T Consensus 526 ~V~~r~~~~~~e~v~~La~~m~~~~~~~~r~~~~~r~~~~r~s~~f~W~~~~~~Y~~A~~ 585 (590)
T cd03793 526 YIVDRRFKSPDESVQQLTQYMYEFCQLSRRQRIIQRNRTERLSDLLDWRNLGRYYRKARQ 585 (590)
T ss_pred EEecCCccchHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 887 56788999999999976543333322333466777888888877766543
No 64
>PRK10125 putative glycosyl transferase; Provisional
Probab=99.84 E-value=2.2e-19 Score=207.41 Aligned_cols=188 Identities=14% Similarity=0.070 Sum_probs=129.3
Q ss_pred eEEEEeeCccCccccchhcCChhhHHHHHHHHHHhcCCceEEEeecc--cccCCHHHHHHHHHHhHHhCCCCCCcEEEEE
Q 002285 337 TRVAAFPIGIDSDRFVRALELPQVQDHINELKERFAGRKVMLGVDRL--DMIKGIPQKILAFEKFLEENPSWRDKVVLIQ 414 (942)
Q Consensus 337 ~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRL--d~~KGi~~lL~Af~~ll~~~P~~~~~vvLvq 414 (942)
.++.++|||||++.+....... ..+ ...++++|++|+|+ ++.||+..+|+|+.++ .++ +.|++
T Consensus 212 ~~i~vI~NGid~~~~~~~~~~~-------~~~-~~~~~~~il~v~~~~~~~~Kg~~~li~A~~~l---~~~----~~L~i 276 (405)
T PRK10125 212 GRCRIINNGIDMATEAILAELP-------PVR-ETQGKPKIAVVAHDLRYDGKTDQQLVREMMAL---GDK----IELHT 276 (405)
T ss_pred CCEEEeCCCcCccccccccccc-------ccc-cCCCCCEEEEEEeccccCCccHHHHHHHHHhC---CCC----eEEEE
Confidence 5788999999975432211100 001 12467889999994 4789999999999876 233 45665
Q ss_pred EEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhc
Q 002285 415 IAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQ 494 (942)
Q Consensus 415 i~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~ 494 (942)
+| +++... . ..|.+++...+..++..+|+.||+||+||.+||||+|++|||||
T Consensus 277 vG-----~g~~~~------~---------------~~v~~~g~~~~~~~l~~~y~~aDvfV~pS~~Egfp~vilEAmA~- 329 (405)
T PRK10125 277 FG-----KFSPFT------A---------------GNVVNHGFETDKRKLMSALNQMDALVFSSRVDNYPLILCEALSI- 329 (405)
T ss_pred Ec-----CCCccc------c---------------cceEEecCcCCHHHHHHHHHhCCEEEECCccccCcCHHHHHHHc-
Confidence 54 332110 0 02444443346789999999999999999999999999999999
Q ss_pred cCCCceEEEeCCCCccccc-CCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHH-HHhcCHHHHHHHHHHHHH
Q 002285 495 ASKKGVLILSEFAGAAQSL-GAGAILVNPWNITEVASSIGYALNMPADEREKRHLHNFMH-VTTHTSQEWAATFVSELN 571 (942)
Q Consensus 495 ~~~~G~lIlSe~~G~~~~l-g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~-v~~~~~~~W~~~fl~~L~ 571 (942)
+.|||+|+.+|+.+.+ +.+|++|+|.|++++|+++...+... ........+++. ...|+.+..++++++-..
T Consensus 330 ---G~PVVat~~gG~~Eiv~~~~G~lv~~~d~~~La~~~~~~~~~~--~~~~~~~~~r~~~~~~fs~~~~~~~y~~lY~ 403 (405)
T PRK10125 330 ---GVPVIATHSDAAREVLQKSGGKTVSEEEVLQLAQLSKPEIAQA--VFGTTLAEFSQRSRAAYSGQQMLEEYVNFYQ 403 (405)
T ss_pred ---CCCEEEeCCCChHHhEeCCcEEEECCCCHHHHHhccCHHHHHH--hhhhHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 4689999999988877 45899999999999998643222100 000112335555 466999999988876543
No 65
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=99.84 E-value=8.4e-19 Score=193.29 Aligned_cols=282 Identities=21% Similarity=0.178 Sum_probs=197.9
Q ss_pred CCCEEEEcCCchhhHHHHHHhhCCCCeEEEEeccCCCChhHhh----cCCchHHHHHHhhhccEEeecCHHHHHHHHHHH
Q 002285 242 EGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSSEIHR----TLPSRTELLRSVLAADLVGFHTYDYARHFVSAC 317 (942)
Q Consensus 242 ~~DiIwvHDyhL~llp~~Lr~~~p~~~I~~flH~PfP~~e~fr----~lp~r~~il~~ll~aDlIgF~t~~~~~~Fl~~~ 317 (942)
+.|+|++|+++...+.. +..+.++.++.+.+|.+++...... ...........+..+|.+.+.+......+.+.
T Consensus 85 ~~Dii~~~~~~~~~~~~-~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~~~~~~~- 162 (374)
T cd03801 85 RFDVVHAHDWLALLAAA-LAARLLGIPLVLTVHGLEFGRPGNELGLLLKLARALERRALRRADRIIAVSEATREELREL- 162 (374)
T ss_pred CCcEEEEechhHHHHHH-HHHHhcCCcEEEEeccchhhccccchhHHHHHHHHHHHHHHHhCCEEEEecHHHHHHHHhc-
Confidence 67999999998877665 4445568899999999876432110 00011112233345788777776555544321
Q ss_pred HHHhccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHhcCCceEEEeecccccCCHHHHHHHHH
Q 002285 318 TRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERFAGRKVMLGVDRLDMIKGIPQKILAFE 397 (942)
Q Consensus 318 ~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi~~lL~Af~ 397 (942)
+.....++.++|+|+|...+.... .... .......+++.|+++||+.+.||+..+++|+.
T Consensus 163 --------------~~~~~~~~~~i~~~~~~~~~~~~~-----~~~~-~~~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~ 222 (374)
T cd03801 163 --------------GGVPPEKITVIPNGVDTERFRPAP-----RAAR-RRLGIPEDEPVILFVGRLVPRKGVDLLLEALA 222 (374)
T ss_pred --------------CCCCCCcEEEecCcccccccCccc-----hHHH-hhcCCcCCCeEEEEecchhhhcCHHHHHHHHH
Confidence 111125789999999998775421 0000 00011245678999999999999999999999
Q ss_pred HhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEEC
Q 002285 398 KFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVT 477 (942)
Q Consensus 398 ~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~p 477 (942)
.+.+++|++ .|+.+| +++....++ +++.+.+.. ..|. +.+.++.+++..+|+.||++++|
T Consensus 223 ~~~~~~~~~----~l~i~G-----~~~~~~~~~----~~~~~~~~~------~~v~-~~g~~~~~~~~~~~~~~di~i~~ 282 (374)
T cd03801 223 KLRKEYPDV----RLVIVG-----DGPLREELE----ALAAELGLG------DRVT-FLGFVPDEDLPALYAAADVFVLP 282 (374)
T ss_pred HHhhhcCCe----EEEEEe-----CcHHHHHHH----HHHHHhCCC------cceE-EEeccChhhHHHHHHhcCEEEec
Confidence 998887764 455554 344333333 333222211 1244 46789999999999999999999
Q ss_pred CCCCCCChhHHHHHhhccCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHh-HHH
Q 002285 478 SLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVASSIGYALNMPADEREKRHLHNF-MHV 554 (942)
Q Consensus 478 Sl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~-~~v 554 (942)
|..||+|++++|||+| +.|+|+++.+|..+.+ +.+|+++++.|+++++++|.++++++ +.++++.++++ ...
T Consensus 283 ~~~~~~~~~~~Ea~~~----g~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~-~~~~~~~~~~~~~~~ 357 (374)
T cd03801 283 SLYEGFGLVLLEAMAA----GLPVVASDVGGIPEVVEDGETGLLVPPGDPEALAEAILRLLDDP-ELRRRLGEAARERVA 357 (374)
T ss_pred chhccccchHHHHHHc----CCcEEEeCCCChhHHhcCCcceEEeCCCCHHHHHHHHHHHHcCh-HHHHHHHHHHHHHHH
Confidence 9999999999999999 3578888988888877 56899999999999999999999865 45556666666 556
Q ss_pred HhcCHHHHHHHHHHHH
Q 002285 555 TTHTSQEWAATFVSEL 570 (942)
Q Consensus 555 ~~~~~~~W~~~fl~~L 570 (942)
+.++++.+++.+++.+
T Consensus 358 ~~~~~~~~~~~~~~~~ 373 (374)
T cd03801 358 ERFSWDRVAARTEEVY 373 (374)
T ss_pred HhcCHHHHHHHHHHhh
Confidence 8899999999887654
No 66
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.84 E-value=5.1e-19 Score=197.33 Aligned_cols=272 Identities=23% Similarity=0.222 Sum_probs=189.6
Q ss_pred CCCEEEEcCCchhhHHHHHHhhCCCCeEEEEeccCCCChhHhhcCCch----HHHHHH-hhhccEEeecCHHHHHHHHHH
Q 002285 242 EGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSSEIHRTLPSR----TELLRS-VLAADLVGFHTYDYARHFVSA 316 (942)
Q Consensus 242 ~~DiIwvHDyhL~llp~~Lr~~~p~~~I~~flH~PfP~~e~fr~lp~r----~~il~~-ll~aDlIgF~t~~~~~~Fl~~ 316 (942)
++|+|++|..........+..+..++++.+++|..||..-........ ..+.+. ...+|.+.+.+......+..
T Consensus 83 ~pdii~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~s~~~~~~~~~- 161 (364)
T cd03814 83 APDVVHIATPGPLGLAALRAARRLGIPVVTSYHTDFPEYLRYYGLGPLSWLAWAYLRWFHNRADRVLVPSPSLADELRA- 161 (364)
T ss_pred CCCEEEEeccchhhHHHHHHHHHcCCCEEEEEecChHHHhhhcccchHhHhhHHHHHHHHHhCCEEEeCCHHHHHHHhc-
Confidence 679999997654433333322334678888899877632111111111 122222 23577777777655442211
Q ss_pred HHHHhccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHh--cCCceEEEeecccccCCHHHHHH
Q 002285 317 CTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERF--AGRKVMLGVDRLDMIKGIPQKIL 394 (942)
Q Consensus 317 ~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~--~~~~iIl~VgRLd~~KGi~~lL~ 394 (942)
....++.++|+|+|.+.|.+..... ..++++ .++++|+++||+.+.||+..+++
T Consensus 162 -----------------~~~~~~~~~~~g~~~~~~~~~~~~~-------~~~~~~~~~~~~~i~~~G~~~~~k~~~~~i~ 217 (364)
T cd03814 162 -----------------RGFRRVRLWPRGVDTELFHPRRRDE-------ALRARLGPPDRPVLLYVGRLAPEKNLEALLD 217 (364)
T ss_pred -----------------cCCCceeecCCCccccccCcccccH-------HHHHHhCCCCCeEEEEEeccccccCHHHHHH
Confidence 1124678899999998886542211 111222 45788999999999999999999
Q ss_pred HHHHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEE
Q 002285 395 AFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVA 474 (942)
Q Consensus 395 Af~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~ 474 (942)
|+.++.++ |+++ |+.+| +++....++ ..+ ..|.| .+.++.+++..+|+.||++
T Consensus 218 ~~~~l~~~-~~~~----l~i~G-----~~~~~~~~~--------~~~--------~~v~~-~g~~~~~~~~~~~~~~d~~ 270 (364)
T cd03814 218 ADLPLRRR-PPVR----LVIVG-----DGPARARLE--------ARY--------PNVHF-LGFLDGEELAAAYASADVF 270 (364)
T ss_pred HHHHhhhc-CCce----EEEEe-----CCchHHHHh--------ccC--------CcEEE-EeccCHHHHHHHHHhCCEE
Confidence 99999877 7654 55443 344322222 111 13554 4668999999999999999
Q ss_pred EECCCCCCCChhHHHHHhhccCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhH
Q 002285 475 LVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVASSIGYALNMPADEREKRHLHNFM 552 (942)
Q Consensus 475 v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~ 552 (942)
++||..||+|++++||||| +.|+|+|+.+|..+.+ +.+|++++|.|.++++++|.++++++ +++.++...+++
T Consensus 271 l~~s~~e~~~~~~lEa~a~----g~PvI~~~~~~~~~~i~~~~~g~~~~~~~~~~l~~~i~~l~~~~-~~~~~~~~~~~~ 345 (364)
T cd03814 271 VFPSRTETFGLVVLEAMAS----GLPVVAPDAGGPADIVTDGENGLLVEPGDAEAFAAALAALLADP-ELRRRMAARARA 345 (364)
T ss_pred EECcccccCCcHHHHHHHc----CCCEEEcCCCCchhhhcCCcceEEcCCCCHHHHHHHHHHHHcCH-HHHHHHHHHHHH
Confidence 9999999999999999999 3578888888888777 46899999999999999999999764 567777788888
Q ss_pred HHHhcCHHHHHHHHHHHH
Q 002285 553 HVTTHTSQEWAATFVSEL 570 (942)
Q Consensus 553 ~v~~~~~~~W~~~fl~~L 570 (942)
.+..++++.+++.+++.+
T Consensus 346 ~~~~~~~~~~~~~~~~~~ 363 (364)
T cd03814 346 EAERRSWEAFLDNLLEAY 363 (364)
T ss_pred HHhhcCHHHHHHHHHHhh
Confidence 889999999999887654
No 67
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=99.84 E-value=9.7e-19 Score=193.76 Aligned_cols=282 Identities=22% Similarity=0.203 Sum_probs=194.3
Q ss_pred CCCCEEEEcCCchhhHHHHHHhhCCCCeEEEEeccCCCChhHhhcCCchHHHHHHhhhccEEeecCHHHHHHHHHHHHHH
Q 002285 241 EEGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSSEIHRTLPSRTELLRSVLAADLVGFHTYDYARHFVSACTRI 320 (942)
Q Consensus 241 ~~~DiIwvHDyhL~llp~~Lr~~~p~~~I~~flH~PfP~~e~fr~lp~r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~ 320 (942)
.+.|+|++|......+...+..+..+.++.+..|.+++....... ..+......+..+|.+.+.+......+.+..
T Consensus 92 ~~~dii~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~-~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~--- 167 (377)
T cd03798 92 FRPDLIHAHFAYPDGFAAALLKRKLGIPLVVTLHGSDVNLLPRKR-LLRALLRRALRRADAVIAVSEALADELKALG--- 167 (377)
T ss_pred CCCCEEEEeccchHHHHHHHHHHhcCCCEEEEeecchhcccCchh-hHHHHHHHHHhcCCeEEeCCHHHHHHHHHhc---
Confidence 478999999655444333333333457888888887653221111 1122233344568999888876666554310
Q ss_pred hccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHhcCCceEEEeecccccCCHHHHHHHHHHhH
Q 002285 321 LGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFL 400 (942)
Q Consensus 321 l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi~~lL~Af~~ll 400 (942)
....++.++|+|+|...|.+.... ....+ ....++++|+++||+.+.||+..+++|++.+.
T Consensus 168 -------------~~~~~~~~i~~~~~~~~~~~~~~~-----~~~~~-~~~~~~~~i~~~g~~~~~k~~~~li~~~~~~~ 228 (377)
T cd03798 168 -------------IDPEKVTVIPNGVDTERFSPADRA-----EARKL-GLPEDKKVILFVGRLVPRKGIDYLIEALARLL 228 (377)
T ss_pred -------------CCCCceEEcCCCcCcccCCCcchH-----HHHhc-cCCCCceEEEEeccCccccCHHHHHHHHHHHH
Confidence 124578899999999887653211 00111 11246788999999999999999999999998
Q ss_pred HhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEECCCC
Q 002285 401 EENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVTSLR 480 (942)
Q Consensus 401 ~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~pSl~ 480 (942)
+++|++ .|+.+ |.++....+ .+++...+. .+.+.+.+.++.+++..+|+.||++++||..
T Consensus 229 ~~~~~~----~l~i~-----g~~~~~~~~----~~~~~~~~~-------~~~v~~~g~~~~~~~~~~~~~ad~~i~~~~~ 288 (377)
T cd03798 229 KKRPDV----HLVIV-----GDGPLREAL----EALAAELGL-------EDRVTFLGAVPHEEVPAYYAAADVFVLPSLR 288 (377)
T ss_pred hcCCCe----EEEEE-----cCCcchHHH----HHHHHhcCC-------cceEEEeCCCCHHHHHHHHHhcCeeecchhh
Confidence 877764 45544 334433333 333333221 1223356889999999999999999999999
Q ss_pred CCCChhHHHHHhhccCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHH-HhHHHHhc
Q 002285 481 DGMNLVSYEFVACQASKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVASSIGYALNMPADEREKRHLH-NFMHVTTH 557 (942)
Q Consensus 481 EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~-~~~~v~~~ 557 (942)
||+|++++|||+| +.|+|+|+.+|..+.+ +.+|+++++.|+++++++|.++++++.. ++..+ .....+.+
T Consensus 289 ~~~~~~~~Ea~~~----G~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~---~~~~~~~~~~~~~~ 361 (377)
T cd03798 289 EGFGLVLLEAMAC----GLPVVATDVGGIPEIITDGENGLLVPPGDPEALAEAILRLLADPWL---RLGRAARRRVAERF 361 (377)
T ss_pred ccCChHHHHHHhc----CCCEEEecCCChHHHhcCCcceeEECCCCHHHHHHHHHHHhcCcHH---HHhHHHHHHHHHHh
Confidence 9999999999999 3578999888887777 4567999999999999999999988654 33333 34455778
Q ss_pred CHHHHHHHHHHHHHH
Q 002285 558 TSQEWAATFVSELND 572 (942)
Q Consensus 558 ~~~~W~~~fl~~L~~ 572 (942)
+++.+++.+.+.+.+
T Consensus 362 s~~~~~~~~~~~~~~ 376 (377)
T cd03798 362 SWENVAERLLELYRE 376 (377)
T ss_pred hHHHHHHHHHHHHhh
Confidence 889988888876653
No 68
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=99.84 E-value=4.2e-19 Score=201.75 Aligned_cols=264 Identities=14% Similarity=0.120 Sum_probs=175.0
Q ss_pred CCCEEEEcCCchhhHHHHHHhh-CCCCeEEEEeccCCCChhHhhcCCchHHHHHHhhhccEEeecCHHHHHHHHHHHHHH
Q 002285 242 EGDVVWCHDYHLMFLPQCLKEY-NNNMKVGWFLHTPFPSSEIHRTLPSRTELLRSVLAADLVGFHTYDYARHFVSACTRI 320 (942)
Q Consensus 242 ~~DiIwvHDyhL~llp~~Lr~~-~p~~~I~~flH~PfP~~e~fr~lp~r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~ 320 (942)
++|+||+|+.....+..++++. ....++..+.|..++....+. ...+..+|.+...+....+.+..
T Consensus 84 ~~Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~--------~~~~~~~d~~i~~S~~~~~~~~~----- 150 (359)
T PRK09922 84 QPDIVICIDVISCLYANKARKKSGKQFKIFSWPHFSLDHKKHAE--------CKKITCADYHLAISSGIKEQMMA----- 150 (359)
T ss_pred CCCEEEEcCHHHHHHHHHHHHHhCCCCeEEEEecCcccccchhh--------hhhhhcCCEEEEcCHHHHHHHHH-----
Confidence 6799999998776666666553 333455566676543321111 11235678877666544443321
Q ss_pred hccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHhcCCceEEEeeccc--ccCCHHHHHHHHHH
Q 002285 321 LGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERFAGRKVMLGVDRLD--MIKGIPQKILAFEK 398 (942)
Q Consensus 321 l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd--~~KGi~~lL~Af~~ 398 (942)
.+ ....++.++|||||.+.+.... + ...++++|+++||+. +.||+..+++|+.+
T Consensus 151 ~~-----------~~~~ki~vi~N~id~~~~~~~~--~-----------~~~~~~~i~~~Grl~~~~~k~~~~l~~a~~~ 206 (359)
T PRK09922 151 RG-----------ISAQRISVIYNPVEIKTIIIPP--P-----------ERDKPAVFLYVGRLKFEGQKNVKELFDGLSQ 206 (359)
T ss_pred cC-----------CCHHHEEEEcCCCCHHHccCCC--c-----------ccCCCcEEEEEEEEecccCcCHHHHHHHHHh
Confidence 11 1234688999999976553211 1 113467899999996 46999999999987
Q ss_pred hHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCC--CHHHHHHHHHHccEEEE
Q 002285 399 FLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSL--DFHALCALYAITDVALV 476 (942)
Q Consensus 399 ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v--~~~el~aly~~ADv~v~ 476 (942)
+. ++ +.|+++ |+|++.+ ++++++.+.+.. ..|+| .|.+ +.+++..+|+.||++|+
T Consensus 207 ~~---~~----~~l~iv-----G~g~~~~----~l~~~~~~~~l~------~~v~f-~G~~~~~~~~~~~~~~~~d~~v~ 263 (359)
T PRK09922 207 TT---GE----WQLHII-----GDGSDFE----KCKAYSRELGIE------QRIIW-HGWQSQPWEVVQQKIKNVSALLL 263 (359)
T ss_pred hC---CC----eEEEEE-----eCCccHH----HHHHHHHHcCCC------CeEEE-ecccCCcHHHHHHHHhcCcEEEE
Confidence 63 23 456655 4565443 345555544321 12554 4544 45899999999999999
Q ss_pred CCCCCCCChhHHHHHhhccCCCceEEEeC-CCCccccc--CCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHH
Q 002285 477 TSLRDGMNLVSYEFVACQASKKGVLILSE-FAGAAQSL--GAGAILVNPWNITEVASSIGYALNMPADEREKRHLHNFMH 553 (942)
Q Consensus 477 pSl~EG~~Lv~lEamA~~~~~~G~lIlSe-~~G~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~ 553 (942)
||..||||++++||||| +.|+|+|+ .+|..+.+ |.+|++|+|.|++++|++|.++++.+.. | ......+.
T Consensus 264 ~s~~Egf~~~~lEAma~----G~Pvv~s~~~~g~~eiv~~~~~G~lv~~~d~~~la~~i~~l~~~~~~-~--~~~~~~~~ 336 (359)
T PRK09922 264 TSKFEGFPMTLLEAMSY----GIPCISSDCMSGPRDIIKPGLNGELYTPGNIDEFVGKLNKVISGEVK-Y--QHDAIPNS 336 (359)
T ss_pred CCcccCcChHHHHHHHc----CCCEEEeCCCCChHHHccCCCceEEECCCCHHHHHHHHHHHHhCccc-C--CHHHHHHH
Confidence 99999999999999999 35799998 78877777 6789999999999999999999987742 1 11222334
Q ss_pred HHhcCHHHHHHHHHHHHHH
Q 002285 554 VTTHTSQEWAATFVSELND 572 (942)
Q Consensus 554 v~~~~~~~W~~~fl~~L~~ 572 (942)
+.++..+...+++...+.+
T Consensus 337 ~~~~~~~~~~~~~~~~~~~ 355 (359)
T PRK09922 337 IERFYEVLYFKNLNNALFS 355 (359)
T ss_pred HHHhhHHHHHHHHHHHHHH
Confidence 4555556666666555543
No 69
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=99.83 E-value=6.5e-19 Score=193.60 Aligned_cols=263 Identities=17% Similarity=0.114 Sum_probs=181.2
Q ss_pred CCCCEEEEcCCchhhHHHHHHhhCCCCeEEEEeccCCCChhHhhcCCchHHHHHHhhhccEEeecCHHHHHHHHHHHHHH
Q 002285 241 EEGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSSEIHRTLPSRTELLRSVLAADLVGFHTYDYARHFVSACTRI 320 (942)
Q Consensus 241 ~~~DiIwvHDyhL~llp~~Lr~~~p~~~I~~flH~PfP~~e~fr~lp~r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~ 320 (942)
.++|+|++|+.+...+...+.... .++.+..|..++..... ..+.......+..+|.+.+.+......+
T Consensus 82 ~~~d~i~~~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~~~--~~~~~~~~~~~~~~d~ii~~s~~~~~~~------- 150 (348)
T cd03820 82 NKPDVVISFLTSLLTFLASLGLKI--VKLIVSEHNSPDAYKKR--LRRLLLRRLLYRRADAVVVLTEEDRALY------- 150 (348)
T ss_pred cCCCEEEEcCchHHHHHHHHhhcc--ccEEEecCCCccchhhh--hHHHHHHHHHHhcCCEEEEeCHHHHHHh-------
Confidence 478999999987222222222221 47777888766532211 0011112233446788877775543100
Q ss_pred hccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHhcCCceEEEeecccccCCHHHHHHHHHHhH
Q 002285 321 LGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFL 400 (942)
Q Consensus 321 l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi~~lL~Af~~ll 400 (942)
......++.++|+|++...+... ...+++.++++||+.+.||++.+++|++++.
T Consensus 151 -----------~~~~~~~~~vi~~~~~~~~~~~~---------------~~~~~~~i~~~g~~~~~K~~~~l~~~~~~l~ 204 (348)
T cd03820 151 -----------YKKFNKNVVVIPNPLPFPPEEPS---------------SDLKSKRILAVGRLVPQKGFDLLIEAWAKIA 204 (348)
T ss_pred -----------hccCCCCeEEecCCcChhhcccc---------------CCCCCcEEEEEEeeccccCHHHHHHHHHHHH
Confidence 11124578899999998765432 1245778999999999999999999999998
Q ss_pred HhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEECCCC
Q 002285 401 EENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVTSLR 480 (942)
Q Consensus 401 ~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~pSl~ 480 (942)
+.+|+++ |+++| +++.... +.+++.+.+.. ..|++ .+. .+++..+|+.||++++||..
T Consensus 205 ~~~~~~~----l~i~G-----~~~~~~~----~~~~~~~~~~~------~~v~~-~g~--~~~~~~~~~~ad~~i~ps~~ 262 (348)
T cd03820 205 KKHPDWK----LRIVG-----DGPEREA----LEALIKELGLE------DRVIL-LGF--TKNIEEYYAKASIFVLTSRF 262 (348)
T ss_pred hcCCCeE----EEEEe-----CCCCHHH----HHHHHHHcCCC------CeEEE-cCC--cchHHHHHHhCCEEEeCccc
Confidence 8888754 55443 3343333 33344443321 12444 443 68999999999999999999
Q ss_pred CCCChhHHHHHhhccCCCceEEEeCCCCccccc---CCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHHhc
Q 002285 481 DGMNLVSYEFVACQASKKGVLILSEFAGAAQSL---GAGAILVNPWNITEVASSIGYALNMPADEREKRHLHNFMHVTTH 557 (942)
Q Consensus 481 EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l---g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~ 557 (942)
||||++++|||+| +.|+|+|+..|..+.+ +.+|+++++.|+++++++|.+++++ ++.+..+.++++..++.+
T Consensus 263 e~~~~~~~Ea~a~----G~Pvi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~ll~~-~~~~~~~~~~~~~~~~~~ 337 (348)
T cd03820 263 EGFPMVLLEAMAF----GLPVISFDCPTGPSEIIEDGVNGLLVPNGDVEALAEALLRLMED-EELRKRMGANARESAERF 337 (348)
T ss_pred cccCHHHHHHHHc----CCCEEEecCCCchHhhhccCcceEEeCCCCHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHh
Confidence 9999999999999 3578888876555544 3489999999999999999999985 456666667778889999
Q ss_pred CHHHHHHHHH
Q 002285 558 TSQEWAATFV 567 (942)
Q Consensus 558 ~~~~W~~~fl 567 (942)
+++.++++|.
T Consensus 338 ~~~~~~~~~~ 347 (348)
T cd03820 338 SIENIIKQWE 347 (348)
T ss_pred CHHHHHHHhc
Confidence 9999888774
No 70
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=99.83 E-value=1.6e-19 Score=197.68 Aligned_cols=193 Identities=18% Similarity=0.240 Sum_probs=124.3
Q ss_pred CEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccC--ceEEeec
Q 002285 602 NRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYN--MWLAAEN 679 (942)
Q Consensus 602 ~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~--l~liaeh 679 (942)
.|||++|+||||++. +..++++++++|++|.+ .|+.|+|+|||++..+.+++..++ .++|+.|
T Consensus 2 ~kli~~DlDGTLl~~--------------~~~i~~~~~~ai~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~N 66 (272)
T PRK15126 2 ARLAAFDMDGTLLMP--------------DHHLGEKTLSTLARLRE-RDITLTFATGRHVLEMQHILGALSLDAYLITGN 66 (272)
T ss_pred ccEEEEeCCCcCcCC--------------CCcCCHHHHHHHHHHHH-CCCEEEEECCCCHHHHHHHHHHcCCCCcEEecC
Confidence 479999999999975 44699999999999987 699999999999999999988874 4789999
Q ss_pred ceEEEeCCCceeecccCCCChhHHHHHHHHHHHHHhcC--------CCeeeeeecce-------EEEEEeccchH-H---
Q 002285 680 GMFLRLTTGEWMTTMPENLNMDWVDSVKHVFEYFTERT--------PRSHFEVRETS-------LVWNYKYADLE-F--- 740 (942)
Q Consensus 680 G~~ir~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~r~--------~Gs~iE~K~~s-------l~~hyr~ad~e-~--- 740 (942)
|+.+...++.- +.....+ .+.+.++++...... .+.+....... ..+.+...+.+ +
T Consensus 67 Ga~I~~~~~~~--l~~~~i~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (272)
T PRK15126 67 GTRVHSLEGEL--LHRQDLP---ADVAELVLHQQWDTRASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLPAH 141 (272)
T ss_pred CcEEEcCCCCE--EEeecCC---HHHHHHHHHHhhhcCcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHcccc
Confidence 99998432221 1101122 234444444322110 01111000000 00000000000 0
Q ss_pred ---------hHHHHHHHHHHHhcCCCCCCCeEEE-EcCcEEEEEECCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCC
Q 002285 741 ---------GRLQARDILQHLWSGPISNASVDVV-QGGRSVEVRAVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHF 810 (942)
Q Consensus 741 ---------~~~qa~el~~~L~~~~~~~~~v~v~-~G~~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~ 810 (942)
......++...+ ...+. ..+.+. .+..++||.|+++|||.||++|++++| ++.+.+++|||
T Consensus 142 ~~~ki~~~~~~~~~~~~~~~l-~~~~~-~~~~~~~s~~~~~eI~~~g~sKg~al~~l~~~~g------i~~~~v~afGD- 212 (272)
T PRK15126 142 GVTKICFCGDHDDLTRLQIQL-NEALG-ERAHLCFSATDCLEVLPVGCNKGAALAVLSQHLG------LSLADCMAFGD- 212 (272)
T ss_pred CceEEEEECCHHHHHHHHHHH-HHHhc-CCEEEEEcCCcEEEeecCCCChHHHHHHHHHHhC------CCHHHeEEecC-
Confidence 001112233333 22121 234544 456799999999999999999999998 67899999999
Q ss_pred CCCCHHHHHhcCc
Q 002285 811 LQKDEDIYTFFEP 823 (942)
Q Consensus 811 d~nDEdMF~~~~~ 823 (942)
+.||.+||+.++.
T Consensus 213 ~~NDi~Ml~~ag~ 225 (272)
T PRK15126 213 AMNDREMLGSVGR 225 (272)
T ss_pred CHHHHHHHHHcCC
Confidence 9999999999965
No 71
>PLN02846 digalactosyldiacylglycerol synthase
Probab=99.83 E-value=4.6e-19 Score=205.28 Aligned_cols=265 Identities=11% Similarity=0.053 Sum_probs=165.9
Q ss_pred CCCEEEEcCCchhhH---HHHHHhhCCCCeEEEEeccCCCChhHhhcCC--chHHHHHHhhhccEEeecCHHHHHHHHHH
Q 002285 242 EGDVVWCHDYHLMFL---PQCLKEYNNNMKVGWFLHTPFPSSEIHRTLP--SRTELLRSVLAADLVGFHTYDYARHFVSA 316 (942)
Q Consensus 242 ~~DiIwvHDyhL~ll---p~~Lr~~~p~~~I~~flH~PfP~~e~fr~lp--~r~~il~~ll~aDlIgF~t~~~~~~Fl~~ 316 (942)
++|+||+|+.-.+.. ...++++. .. ++.++|+.|+. +++... .....+...+ ..|++.|.
T Consensus 116 ~pDVIHv~tP~~LG~~~~g~~~~~k~-~~-vV~tyHT~y~~--Y~~~~~~g~~~~~l~~~~---------~~~~~r~~-- 180 (462)
T PLN02846 116 EADIAVLEEPEHLTWYHHGKRWKTKF-RL-VIGIVHTNYLE--YVKREKNGRVKAFLLKYI---------NSWVVDIY-- 180 (462)
T ss_pred CCCEEEEcCchhhhhHHHHHHHHhcC-Cc-EEEEECCChHH--HHHHhccchHHHHHHHHH---------HHHHHHHh--
Confidence 579999999765544 33444443 34 77789998753 322211 1111111111 11222221
Q ss_pred HHHHhccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHh-cC---CceEEEeecccccCCHHHH
Q 002285 317 CTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERF-AG---RKVMLGVDRLDMIKGIPQK 392 (942)
Q Consensus 317 ~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~-~~---~~iIl~VgRLd~~KGi~~l 392 (942)
|+.++..+... ..+. ..+.+.+.|||++.|.+.... +++.+ ++ .+++++||||.+.||+..+
T Consensus 181 ~d~vi~pS~~~--~~l~---~~~i~~v~GVd~~~f~~~~~~---------~~~~~~~~~~~~~~~l~vGRL~~eK~~~~L 246 (462)
T PLN02846 181 CHKVIRLSAAT--QDYP---RSIICNVHGVNPKFLEIGKLK---------LEQQKNGEQAFTKGAYYIGKMVWSKGYKEL 246 (462)
T ss_pred cCEEEccCHHH--HHHh---hCEEecCceechhhcCCCccc---------HhhhcCCCCCcceEEEEEecCcccCCHHHH
Confidence 23222222100 0010 123334689999988754221 11122 22 3468999999999999999
Q ss_pred HHHHHHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHcc
Q 002285 393 ILAFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITD 472 (942)
Q Consensus 393 L~Af~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~AD 472 (942)
|+||.++.+..|+++ ++++ |+||+.++|+ +++.+++. .++++.+..+.+ .+|+.+|
T Consensus 247 i~a~~~l~~~~~~~~--l~iv-------GdGp~~~~L~----~~a~~l~l--------~~~vf~G~~~~~---~~~~~~D 302 (462)
T PLN02846 247 LKLLHKHQKELSGLE--VDLY-------GSGEDSDEVK----AAAEKLEL--------DVRVYPGRDHAD---PLFHDYK 302 (462)
T ss_pred HHHHHHHHhhCCCeE--EEEE-------CCCccHHHHH----HHHHhcCC--------cEEEECCCCCHH---HHHHhCC
Confidence 999999988888854 4444 7888755554 44444332 133456655444 6899999
Q ss_pred EEEECCCCCCCChhHHHHHhhccCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHH
Q 002285 473 VALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVASSIGYALNMPADEREKRHLHN 550 (942)
Q Consensus 473 v~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~ 550 (942)
|||+||..||||+|++||||| +.|||+++..| .+.+ +.+|+++ .|.++++++|..+|..+++++.. +.
T Consensus 303 vFv~pS~~Et~g~v~lEAmA~----G~PVVa~~~~~-~~~v~~~~ng~~~--~~~~~~a~ai~~~l~~~~~~~~~---~a 372 (462)
T PLN02846 303 VFLNPSTTDVVCTTTAEALAM----GKIVVCANHPS-NEFFKQFPNCRTY--DDGKGFVRATLKALAEEPAPLTD---AQ 372 (462)
T ss_pred EEEECCCcccchHHHHHHHHc----CCcEEEecCCC-cceeecCCceEec--CCHHHHHHHHHHHHccCchhHHH---HH
Confidence 999999999999999999999 34678887776 5666 7788888 48999999999999865433321 11
Q ss_pred hHHHHhcCHHHHHHHHHHHHHH
Q 002285 551 FMHVTTHTSQEWAATFVSELND 572 (942)
Q Consensus 551 ~~~v~~~~~~~W~~~fl~~L~~ 572 (942)
...++++.-+++|+..+.-
T Consensus 373 ---~~~~SWe~~~~~l~~~~~~ 391 (462)
T PLN02846 373 ---RHELSWEAATERFLRVADL 391 (462)
T ss_pred ---HHhCCHHHHHHHHHHHhcc
Confidence 2478888888888776543
No 72
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=99.83 E-value=1.6e-19 Score=196.69 Aligned_cols=195 Identities=17% Similarity=0.226 Sum_probs=130.5
Q ss_pred CCEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccCc--eEEee
Q 002285 601 NNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYNM--WLAAE 678 (942)
Q Consensus 601 ~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l--~liae 678 (942)
..|+|++|+||||++. +..++++++++|++|.+ .|..|+|+|||++..+.+.+..+++ ++|++
T Consensus 2 ~~kli~~DlDGTLl~~--------------~~~i~~~~~~al~~~~~-~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~ 66 (264)
T COG0561 2 MIKLLAFDLDGTLLDS--------------NKTISPETKEALARLRE-KGVKVVLATGRPLPDVLSILEELGLDGPLITF 66 (264)
T ss_pred CeeEEEEcCCCCccCC--------------CCccCHHHHHHHHHHHH-CCCEEEEECCCChHHHHHHHHHcCCCccEEEe
Confidence 4689999999999987 45599999999999987 6999999999999999999999854 69999
Q ss_pred cceEEEeCCCceeecccCCCChhHHHHHHHHHHHHHhc--CCCeeeeeecceEEE-----------E--E----eccc--
Q 002285 679 NGMFLRLTTGEWMTTMPENLNMDWVDSVKHVFEYFTER--TPRSHFEVRETSLVW-----------N--Y----KYAD-- 737 (942)
Q Consensus 679 hG~~ir~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~r--~~Gs~iE~K~~sl~~-----------h--y----r~ad-- 737 (942)
||+++...++. +.....+ .+.+..+++..... ....+.......... + + ...+
T Consensus 67 NGa~i~~~~~~---i~~~~l~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (264)
T COG0561 67 NGALIYNGGEL---LFQKPLS---REDVEELLELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAEL 140 (264)
T ss_pred CCeEEecCCcE---EeeecCC---HHHHHHHHHHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhc
Confidence 99999976332 2211223 44555555554222 111111111000000 0 0 0000
Q ss_pred h-------HHhHHHHHHHHHHHhcCCCCCCCeEEEEcCcE-EEEEECCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeC
Q 002285 738 L-------EFGRLQARDILQHLWSGPISNASVDVVQGGRS-VEVRAVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGH 809 (942)
Q Consensus 738 ~-------e~~~~qa~el~~~L~~~~~~~~~v~v~~G~~~-vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD 809 (942)
. +.......++...+ ...+....+.+..+... +||.|+|+|||.|++.++++++ ++.+.+++|||
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~s~~~~lei~~~g~~K~~al~~l~~~lg------i~~~~v~afGD 213 (264)
T COG0561 141 EDNKIIALDKDHEILEELVEAL-RKRFPDLGLTVSSSGPISLDITPKGVSKGYALQRLAKLLG------IKLEEVIAFGD 213 (264)
T ss_pred CcceEEEEecChHhHHHHHHHH-hhhccccceEEEEcCCceEEEecCCCchHHHHHHHHHHhC------CCHHHeEEeCC
Confidence 0 00011122333333 22222234556666544 9999999999999999999998 56789999999
Q ss_pred CCCCCHHHHHhcCcC
Q 002285 810 FLQKDEDIYTFFEPE 824 (942)
Q Consensus 810 ~d~nDEdMF~~~~~~ 824 (942)
+.||.+||++++..
T Consensus 214 -~~ND~~Ml~~ag~g 227 (264)
T COG0561 214 -STNDIEMLEVAGLG 227 (264)
T ss_pred -ccccHHHHHhcCee
Confidence 99999999999874
No 73
>PHA01633 putative glycosyl transferase group 1
Probab=99.83 E-value=2.2e-18 Score=192.56 Aligned_cols=196 Identities=17% Similarity=0.196 Sum_probs=144.3
Q ss_pred EeeCccCccccchhcCChhhHHHHHHHHHHhcCCceEEEeecccccCCHHHHHHHHHHhHHhCCCCCCcEEEEEEEcCCC
Q 002285 341 AFPIGIDSDRFVRALELPQVQDHINELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPSWRDKVVLIQIAVPTR 420 (942)
Q Consensus 341 viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi~~lL~Af~~ll~~~P~~~~~vvLvqi~~psr 420 (942)
++|+|||.+.|.+.... ..+..+.+...+++..+|++|||+++.||++.+|+|++++.+++|++..++.|+.++
T Consensus 117 ~I~~GVD~~~f~p~~~~--~~~~r~~~~~~~~~~~~i~~vGRl~~~KG~~~LI~A~~~L~~~~p~~~~~i~l~ivG---- 190 (335)
T PHA01633 117 PVFHGINFKIVENAEKL--VPQLKQKLDKDFPDTIKFGIVSGLTKRKNMDLMLQVFNELNTKYPDIAKKIHFFVIS---- 190 (335)
T ss_pred eeeCCCChhhcCccchh--hHHHHHHhCcCCCCCeEEEEEeCCccccCHHHHHHHHHHHHHhCCCccccEEEEEEc----
Confidence 36789999998764211 111222222223466789999999999999999999999999999876556676552
Q ss_pred CChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeC--CCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhccCCC
Q 002285 421 TDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLD--RSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKK 498 (942)
Q Consensus 421 gd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~--~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~ 498 (942)
+ . ++.++ + ..+ .|+|++ +.++.+++.++|+.||+||+||..||||++++||||| +
T Consensus 191 -~-~-------~~~~l----~----l~~--~V~f~g~~G~~~~~dl~~~y~~aDifV~PS~~EgfGlvlLEAMA~----G 247 (335)
T PHA01633 191 -H-K-------QFTQL----E----VPA--NVHFVAEFGHNSREYIFAFYGAMDFTIVPSGTEGFGMPVLESMAM----G 247 (335)
T ss_pred -H-H-------HHHHc----C----CCC--cEEEEecCCCCCHHHHHHHHHhCCEEEECCccccCCHHHHHHHHc----C
Confidence 1 1 11111 1 111 266654 6778899999999999999999999999999999999 3
Q ss_pred ceEEEeCCCCcccccC------------------C--ceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHHhcC
Q 002285 499 GVLILSEFAGAAQSLG------------------A--GAILVNPWNITEVASSIGYALNMPADEREKRHLHNFMHVTTHT 558 (942)
Q Consensus 499 G~lIlSe~~G~~~~lg------------------~--~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~~ 558 (942)
.|+|+|+.+|..+..| . .|++|++.|++++|++|..++.+.. +.++..++++..++++
T Consensus 248 ~PVVas~~~~l~Ei~g~~~~~Li~~~~v~~~~~~~~g~g~~~~~~d~~~la~ai~~~~~~~~--~~~~~~~~~~~a~~f~ 325 (335)
T PHA01633 248 TPVIHQLMPPLDEFTSWQWNLLIKSSKVEEYYDKEHGQKWKIHKFQIEDMANAIILAFELQD--REERSMKLKELAKKYD 325 (335)
T ss_pred CCEEEccCCCceeecCCccceeeCCCCHHHhcCcccCceeeecCCCHHHHHHHHHHHHhccC--hhhhhHHHHHHHHhcC
Confidence 5788888887766543 1 2567889999999999999987753 3344556778899999
Q ss_pred HHHHHHHHH
Q 002285 559 SQEWAATFV 567 (942)
Q Consensus 559 ~~~W~~~fl 567 (942)
++.-+++|+
T Consensus 326 ~~~~~~~~~ 334 (335)
T PHA01633 326 IRNLYTRFL 334 (335)
T ss_pred HHHHHHHhh
Confidence 998888775
No 74
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=99.82 E-value=2.9e-18 Score=190.56 Aligned_cols=258 Identities=17% Similarity=0.179 Sum_probs=175.2
Q ss_pred CCCEEEEcCCchhhHHHHHHhhCCCCeEEEEeccCCCChhHhhcCCchHHHHHHhhhccEEeecCHHHHHHHHHHHHHHh
Q 002285 242 EGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSSEIHRTLPSRTELLRSVLAADLVGFHTYDYARHFVSACTRIL 321 (942)
Q Consensus 242 ~~DiIwvHDyhL~llp~~Lr~~~p~~~I~~flH~PfP~~e~fr~lp~r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~l 321 (942)
++|+|++|.+..+..+.+...+...+++.+++|-.++... ....+. ...|.+...+....+.|..
T Consensus 96 ~~dii~~~~~~~~~~~~~~~~~~~~~~~i~~~hd~~~~~~------~~~~~~---~~~d~ii~~s~~~~~~~~~------ 160 (359)
T cd03823 96 RPDVVHFHHLQGLGVSILRAARDRGIPIVLTLHDYWLICP------RQGLFK---KGGDAVIAPSRFLLDRYVA------ 160 (359)
T ss_pred CCCEEEECCccchHHHHHHHHHhcCCCEEEEEeeeeeecc------hhhhhc---cCCCEEEEeCHHHHHHHHH------
Confidence 6799999987554443332222345889999997553211 111111 1127777766555444432
Q ss_pred ccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHhcCCceEEEeecccccCCHHHHHHHHHHhHH
Q 002285 322 GLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFLE 401 (942)
Q Consensus 322 ~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi~~lL~Af~~ll~ 401 (942)
+.....++.++|+|+|...+..... ....++++|+++||+.+.||+..+++|+..+.+
T Consensus 161 ----------~~~~~~~~~vi~n~~~~~~~~~~~~------------~~~~~~~~i~~~G~~~~~k~~~~li~~~~~l~~ 218 (359)
T cd03823 161 ----------NGLFAEKISVIRNGIDLDRAKRPRR------------APPGGRLRFGFIGQLTPHKGVDLLLEAFKRLPR 218 (359)
T ss_pred ----------cCCCccceEEecCCcChhhcccccc------------CCCCCceEEEEEecCccccCHHHHHHHHHHHHh
Confidence 1111357899999999987754211 012456789999999999999999999999876
Q ss_pred hCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEECCC-C
Q 002285 402 ENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVTSL-R 480 (942)
Q Consensus 402 ~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~pSl-~ 480 (942)
++ +.|+++| .++......... ..+ ..|. +.+.++.+++..+|+.||++++||. .
T Consensus 219 --~~----~~l~i~G-----~~~~~~~~~~~~-----~~~--------~~v~-~~g~~~~~~~~~~~~~ad~~i~ps~~~ 273 (359)
T cd03823 219 --GD----IELVIVG-----NGLELEEESYEL-----EGD--------PRVE-FLGAYPQEEIDDFYAEIDVLVVPSIWP 273 (359)
T ss_pred --cC----cEEEEEc-----CchhhhHHHHhh-----cCC--------CeEE-EeCCCCHHHHHHHHHhCCEEEEcCccc
Confidence 45 4455554 333221111111 111 1244 5688899999999999999999998 7
Q ss_pred CCCChhHHHHHhhccCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHHhcC
Q 002285 481 DGMNLVSYEFVACQASKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVASSIGYALNMPADEREKRHLHNFMHVTTHT 558 (942)
Q Consensus 481 EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~~ 558 (942)
||+|++++|||+| +.|+|+|+.+|..+.+ +.+|+++++.|+++++++|.++++. ++.++++.+++++.+..
T Consensus 274 e~~~~~~~Ea~a~----G~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~~~-~~~~~~~~~~~~~~~~~-- 346 (359)
T cd03823 274 ENFPLVIREALAA----GVPVIASDIGGMAELVRDGVNGLLFPPGDAEDLAAALERLIDD-PDLLERLRAGIEPPRSI-- 346 (359)
T ss_pred CCCChHHHHHHHC----CCCEEECCCCCHHHHhcCCCcEEEECCCCHHHHHHHHHHHHhC-hHHHHHHHHhHHHhhhH--
Confidence 9999999999999 3578999988888777 4579999999999999999999984 45666666666666543
Q ss_pred HHHHHHHHHHH
Q 002285 559 SQEWAATFVSE 569 (942)
Q Consensus 559 ~~~W~~~fl~~ 569 (942)
..+++++++.
T Consensus 347 -~~~~~~~~~~ 356 (359)
T cd03823 347 -EDQAEEYLKL 356 (359)
T ss_pred -HHHHHHHHHH
Confidence 5555555543
No 75
>PLN02501 digalactosyldiacylglycerol synthase
Probab=99.82 E-value=5.1e-19 Score=207.42 Aligned_cols=263 Identities=12% Similarity=0.083 Sum_probs=163.7
Q ss_pred CCCEEEEcCCchhhHH---HHHHhhCCCCeEEEEeccCCCChhHhhcCCchHHHHHHhhhccEEeecCHHHHHHHHHH--
Q 002285 242 EGDVVWCHDYHLMFLP---QCLKEYNNNMKVGWFLHTPFPSSEIHRTLPSRTELLRSVLAADLVGFHTYDYARHFVSA-- 316 (942)
Q Consensus 242 ~~DiIwvHDyhL~llp---~~Lr~~~p~~~I~~flH~PfP~~e~fr~lp~r~~il~~ll~aDlIgF~t~~~~~~Fl~~-- 316 (942)
++||||+|..-.+... ....++. + +++..+||.|+. +++.... ..+..++ ..++++|+..
T Consensus 434 ~PDVVHLatP~~LGw~~~Glr~ArKl-~-PVVasyHTny~e--Yl~~y~~--g~L~~~l---------lk~l~~~v~r~h 498 (794)
T PLN02501 434 DADIAILEEPEHLNWYHHGKRWTDKF-N-HVVGVVHTNYLE--YIKREKN--GALQAFF---------VKHINNWVTRAY 498 (794)
T ss_pred CCCEEEECCchhhccHHHHHHHHHHc-C-CeEEEEeCCcHH--HHhHhcc--hhHHHHH---------HHHHHHHHHHhh
Confidence 7799999986544333 2233333 2 577888999985 3332211 1111110 1123334332
Q ss_pred HHHHhccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHhc---CCceEEEeecccccCCHHHHH
Q 002285 317 CTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERFA---GRKVMLGVDRLDMIKGIPQKI 393 (942)
Q Consensus 317 ~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~---~~~iIl~VgRLd~~KGi~~lL 393 (942)
|..++.++.... .+. . .+....+|||++.|.+.... ... ..++ ..+.+++||||.+.||+..+|
T Consensus 499 cD~VIaPS~atq--~L~--~-~vI~nVnGVDte~F~P~~r~-------~~~-r~lgi~~~~kgiLfVGRLa~EKGld~LL 565 (794)
T PLN02501 499 CHKVLRLSAATQ--DLP--K-SVICNVHGVNPKFLKIGEKV-------AEE-RELGQQAFSKGAYFLGKMVWAKGYRELI 565 (794)
T ss_pred CCEEEcCCHHHH--Hhc--c-cceeecccccccccCCcchh-------HHH-HhcCCccccCceEEEEcccccCCHHHHH
Confidence 454444331100 111 1 11112269999999864321 011 1221 234589999999999999999
Q ss_pred HHHHHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccE
Q 002285 394 LAFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDV 473 (942)
Q Consensus 394 ~Af~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv 473 (942)
+|+..+.++.|+++ |+++ |+||...+ +++++.+++. .|+|+++ .++...+|+.+||
T Consensus 566 eAla~L~~~~pnvr----LvIV-----GDGP~ree----Le~la~eLgL--------~V~FLG~---~dd~~~lyasaDV 621 (794)
T PLN02501 566 DLLAKHKNELDGFN----LDVF-----GNGEDAHE----VQRAAKRLDL--------NLNFLKG---RDHADDSLHGYKV 621 (794)
T ss_pred HHHHHHHhhCCCeE----EEEE-----cCCccHHH----HHHHHHHcCC--------EEEecCC---CCCHHHHHHhCCE
Confidence 99999988888754 4444 67886544 4444444332 2555543 3445589999999
Q ss_pred EEECCCCCCCChhHHHHHhhccCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHh
Q 002285 474 ALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVASSIGYALNMPADEREKRHLHNF 551 (942)
Q Consensus 474 ~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~ 551 (942)
||+||.+||||+|++||||| +.|||+++..|.. .+ |.+|++. .|.++++++|.++|.+++ ++..+ .
T Consensus 622 FVlPS~sEgFGlVlLEAMA~----GlPVVATd~pG~e-~V~~g~nGll~--~D~EafAeAI~~LLsd~~-~rl~~-~--- 689 (794)
T PLN02501 622 FINPSISDVLCTATAEALAM----GKFVVCADHPSNE-FFRSFPNCLTY--KTSEDFVAKVKEALANEP-QPLTP-E--- 689 (794)
T ss_pred EEECCCcccchHHHHHHHHc----CCCEEEecCCCCc-eEeecCCeEec--CCHHHHHHHHHHHHhCch-hhhHH-H---
Confidence 99999999999999999999 3578888887743 34 4566654 799999999999999775 22211 1
Q ss_pred HHHHhcCHHHHHHHHHHH
Q 002285 552 MHVTTHTSQEWAATFVSE 569 (942)
Q Consensus 552 ~~v~~~~~~~W~~~fl~~ 569 (942)
....++++.-+++|++.
T Consensus 690 -a~~~~SWeAaadrLle~ 706 (794)
T PLN02501 690 -QRYNLSWEAATQRFMEY 706 (794)
T ss_pred -HHhhCCHHHHHHHHHHh
Confidence 13367777777777653
No 76
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=99.82 E-value=5.7e-19 Score=188.03 Aligned_cols=182 Identities=14% Similarity=0.239 Sum_probs=121.7
Q ss_pred CEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccC--ceEEeec
Q 002285 602 NRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYN--MWLAAEN 679 (942)
Q Consensus 602 ~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~--l~liaeh 679 (942)
.|+|++|+||||++. +..++++++++|++|.+ .|+.|+|+|||+...+.+++..++ .++|++|
T Consensus 3 ~kli~~DlDGTLl~~--------------~~~i~~~~~~al~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~n 67 (230)
T PRK01158 3 IKAIAIDIDGTITDK--------------DRRLSLKAVEAIRKAEK-LGIPVILATGNVLCFARAAAKLIGTSGPVIAEN 67 (230)
T ss_pred eeEEEEecCCCcCCC--------------CCccCHHHHHHHHHHHH-CCCEEEEEcCCchHHHHHHHHHhCCCCcEEEec
Confidence 489999999999975 34689999999999996 799999999999999998877774 4799999
Q ss_pred ceEEEeC--CCceeecccCCCChhHHHHHHHHHHHHHhcCCCe--eeeee--c--ceEEEEEeccchHHhHHHHHHHHHH
Q 002285 680 GMFLRLT--TGEWMTTMPENLNMDWVDSVKHVFEYFTERTPRS--HFEVR--E--TSLVWNYKYADLEFGRLQARDILQH 751 (942)
Q Consensus 680 G~~ir~~--~~~w~~~~~~~~~~~w~~~v~~il~~~~~r~~Gs--~iE~K--~--~sl~~hyr~ad~e~~~~qa~el~~~ 751 (942)
|+.+... +..+.. ... +.+..+++.+.+..+.. .+... . ......++..+ ..+..+.++.
T Consensus 68 Ga~i~~~~~~~~~~~---~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~ 135 (230)
T PRK01158 68 GGVISVGFDGKRIFL---GDI-----EECEKAYSELKKRFPEASTSLTKLDPDYRKTEVALRRTVP----VEEVRELLEE 135 (230)
T ss_pred CeEEEEcCCCCEEEE---cch-----HHHHHHHHHHHHhccccceeeecCCcccccceeeeccccc----HHHHHHHHHH
Confidence 9998753 222111 111 12233333332222211 11100 0 00011111111 1112222222
Q ss_pred HhcCCCCCCCeEEEEcCcEEEEEECCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCc
Q 002285 752 LWSGPISNASVDVVQGGRSVEVRAVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 752 L~~~~~~~~~v~v~~G~~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
+ ...+.+..+...+|+.|+++|||.|++.++++++ ++++.+++||| +.||++||+.++.
T Consensus 136 ~------~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~------i~~~~~i~~GD-~~NDi~m~~~ag~ 194 (230)
T PRK01158 136 L------GLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMG------IDPEEVAAIGD-SENDLEMFEVAGF 194 (230)
T ss_pred c------CCcEEEEecceEEEEeeCCCChHHHHHHHHHHhC------CCHHHEEEECC-chhhHHHHHhcCc
Confidence 2 1235566666789999999999999999999998 56889999999 9999999999865
No 77
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=99.82 E-value=4.7e-18 Score=195.78 Aligned_cols=194 Identities=19% Similarity=0.192 Sum_probs=139.7
Q ss_pred eeEEEEeeCccCccccchhcCChhhHHHHHHHHHHhcCCceEEEeecccccCCHHHHH----HHHHHhHHhCCCCCCcEE
Q 002285 336 LTRVAAFPIGIDSDRFVRALELPQVQDHINELKERFAGRKVMLGVDRLDMIKGIPQKI----LAFEKFLEENPSWRDKVV 411 (942)
Q Consensus 336 ~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi~~lL----~Af~~ll~~~P~~~~~vv 411 (942)
..++.++|+|||.+.|.+...... . ...++++|+++||+++.||++.++ +++..+.+.+|+++
T Consensus 195 ~~~v~vipngvd~~~f~~~~~~~~------~---~~~~~~~ilf~G~l~~~k~~~~l~~~~~~~~~~l~~~~p~~~---- 261 (397)
T TIGR03087 195 AGRITAFPNGVDADFFSPDRDYPN------P---YPPGKRVLVFTGAMDYWPNIDAVVWFAERVFPAVRARRPAAE---- 261 (397)
T ss_pred CCCeEEeecccchhhcCCCccccC------C---CCCCCcEEEEEEecCCccCHHHHHHHHHHHHHHHHHHCCCcE----
Confidence 357889999999998865321100 0 013567899999999999999888 56666777788865
Q ss_pred EEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEECCC-CCCCChhHHHH
Q 002285 412 LIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVTSL-RDGMNLVSYEF 490 (942)
Q Consensus 412 Lvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~pSl-~EG~~Lv~lEa 490 (942)
|+++ |+++. .+++++.. . ..|+| .|.++ ++..+|+.||++|+||. .||++++++||
T Consensus 262 l~iv-----G~g~~-----~~~~~l~~----~------~~V~~-~G~v~--~~~~~~~~adv~v~Ps~~~eG~~~~~lEA 318 (397)
T TIGR03087 262 FYIV-----GAKPS-----PAVRALAA----L------PGVTV-TGSVA--DVRPYLAHAAVAVAPLRIARGIQNKVLEA 318 (397)
T ss_pred EEEE-----CCCCh-----HHHHHhcc----C------CCeEE-eeecC--CHHHHHHhCCEEEecccccCCcccHHHHH
Confidence 4444 44543 12333321 1 12554 56675 68999999999999997 59999999999
Q ss_pred HhhccCCCceEEEeCCCCccccc-CCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHH-HhcCHHHHHHHHHH
Q 002285 491 VACQASKKGVLILSEFAGAAQSL-GAGAILVNPWNITEVASSIGYALNMPADEREKRHLHNFMHV-TTHTSQEWAATFVS 568 (942)
Q Consensus 491 mA~~~~~~G~lIlSe~~G~~~~l-g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~fl~ 568 (942)
||| +.|+|+|..++..... +.+|+++. .|++++|++|.+++++ ++.++++.+++++++ +.|+++..++++.+
T Consensus 319 ma~----G~PVV~t~~~~~~i~~~~~~g~lv~-~~~~~la~ai~~ll~~-~~~~~~~~~~ar~~v~~~fsw~~~~~~~~~ 392 (397)
T TIGR03087 319 MAM----AKPVVASPEAAEGIDALPGAELLVA-ADPADFAAAILALLAN-PAEREELGQAARRRVLQHYHWPRNLARLDA 392 (397)
T ss_pred HHc----CCCEEecCcccccccccCCcceEeC-CCHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 999 3567777754321111 34688886 8999999999999975 456777778888887 57999999998876
Q ss_pred HHH
Q 002285 569 ELN 571 (942)
Q Consensus 569 ~L~ 571 (942)
-+.
T Consensus 393 ~l~ 395 (397)
T TIGR03087 393 LLE 395 (397)
T ss_pred Hhc
Confidence 553
No 78
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.82 E-value=9.3e-19 Score=191.64 Aligned_cols=187 Identities=17% Similarity=0.181 Sum_probs=125.8
Q ss_pred CCEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccCc---eEEe
Q 002285 601 NNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYNM---WLAA 677 (942)
Q Consensus 601 ~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l---~lia 677 (942)
..++||+|+||||++. +..+++.++++|++|.+ .|+.|+|+|||+...+.+++..+++ ++|+
T Consensus 6 ~~~lI~~DlDGTLL~~--------------~~~i~~~~~~ai~~l~~-~Gi~~viaTGR~~~~i~~~~~~l~~~~~~~I~ 70 (271)
T PRK03669 6 DPLLIFTDLDGTLLDS--------------HTYDWQPAAPWLTRLRE-AQVPVILCSSKTAAEMLPLQQTLGLQGLPLIA 70 (271)
T ss_pred CCeEEEEeCccCCcCC--------------CCcCcHHHHHHHHHHHH-cCCeEEEEcCCCHHHHHHHHHHhCCCCCcEEE
Confidence 4789999999999975 34578999999999997 6999999999999999999888754 6999
Q ss_pred ecceEEEeCCC-cee---ecccCCCChhHHHHHHHHHHHHHhcCCCeee--ee-----------------------ecce
Q 002285 678 ENGMFLRLTTG-EWM---TTMPENLNMDWVDSVKHVFEYFTERTPRSHF--EV-----------------------RETS 728 (942)
Q Consensus 678 ehG~~ir~~~~-~w~---~~~~~~~~~~w~~~v~~il~~~~~r~~Gs~i--E~-----------------------K~~s 728 (942)
+||+.+....+ ... .......+ .+.+.++++..... .+..+ .. ....
T Consensus 71 ~NGa~I~~~~~~~~~~~~~~~~~~l~---~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (271)
T PRK03669 71 ENGAVIQLDEQWQDHPDFPRIISGIS---HGEIRQVLNTLREK-EGFKFTTFDDVDDATIAEWTGLSRSQAALARLHEAS 146 (271)
T ss_pred eCCCEEEecCcccCCCCceEeecCCC---HHHHHHHHHHHHHh-cCCceeecccCCHHHHHHHhCCCHHHHHHHhccccC
Confidence 99999985322 100 01101122 34455555543321 11110 00 0000
Q ss_pred EEEEEeccchHHhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEECCCCHHHHHHHHHHHhcccCCCCC---CCceEE
Q 002285 729 LVWNYKYADLEFGRLQARDILQHLWSGPISNASVDVVQGGRSVEVRAVGVTKGAAIDRILGEIVRHKGLKT---PIDYVL 805 (942)
Q Consensus 729 l~~hyr~ad~e~~~~qa~el~~~L~~~~~~~~~v~v~~G~~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~---~~d~vl 805 (942)
..+.+.. +++ +..++.+.+ .. ..+.++.+..++||.|+++|||.|+++|+++++ + +.+.++
T Consensus 147 ~~~~~~~-~~~----~~~~~~~~l-~~----~~~~~~~~~~~iEi~~~g~sKg~al~~l~~~lg------i~~~~~~~vi 210 (271)
T PRK03669 147 VTLIWRD-SDE----RMAQFTARL-AE----LGLQFVQGARFWHVLDASAGKDQAANWLIATYQ------QLSGTRPTTL 210 (271)
T ss_pred ceeEecC-CHH----HHHHHHHHH-HH----CCCEEEecCeeEEEecCCCCHHHHHHHHHHHHH------hhcCCCceEE
Confidence 1111110 111 122334444 22 145666666789999999999999999999998 5 689999
Q ss_pred EEeCCCCCCHHHHHhcCc
Q 002285 806 CIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 806 ~iGD~d~nDEdMF~~~~~ 823 (942)
+||| +.||.+||++++.
T Consensus 211 afGD-s~NDi~Ml~~ag~ 227 (271)
T PRK03669 211 GLGD-GPNDAPLLDVMDY 227 (271)
T ss_pred EEcC-CHHHHHHHHhCCE
Confidence 9999 9999999999865
No 79
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=99.82 E-value=1.7e-18 Score=201.01 Aligned_cols=268 Identities=10% Similarity=-0.020 Sum_probs=173.4
Q ss_pred CCCCEEEEcCCchh--hHHHHHHhhCCCCeEEEEeccCCCChhHhhcCCc-------hHHHHHHh-hhccEEeecCHHHH
Q 002285 241 EEGDVVWCHDYHLM--FLPQCLKEYNNNMKVGWFLHTPFPSSEIHRTLPS-------RTELLRSV-LAADLVGFHTYDYA 310 (942)
Q Consensus 241 ~~~DiIwvHDyhL~--llp~~Lr~~~p~~~I~~flH~PfP~~e~fr~lp~-------r~~il~~l-l~aDlIgF~t~~~~ 310 (942)
+++|+|++|..... .+..++..+....++++.+|.-+++..-. ..+. ...+.+.+ ..||.|...+....
T Consensus 94 ~~~Dvi~~~~~~~~~~~~~a~~~~~~~~~~~V~~~h~~~~~~~~~-~~~~~~~~~~~~~~~e~~~~~~ad~ii~vS~~~~ 172 (415)
T cd03816 94 RPADYILIQNPPSIPTLLIAWLYCLLRRTKLIIDWHNYGYTILAL-KLGENHPLVRLAKWYEKLFGRLADYNLCVTKAMK 172 (415)
T ss_pred CCCCEEEEeCCCCchHHHHHHHHHHHhCCeEEEEcCCchHHHHhc-ccCCCCHHHHHHHHHHHHHhhcCCEeeecCHHHH
Confidence 46899999985432 22233323334688998888654321000 0100 01111111 23666665554433
Q ss_pred HHHHHHHHHHhccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHH---------------H--hcC
Q 002285 311 RHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKE---------------R--FAG 373 (942)
Q Consensus 311 ~~Fl~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~---------------~--~~~ 373 (942)
+.+. .++....+|.++|+| +.+.|.+..... ....+.+ . .++
T Consensus 173 ~~l~----------------~~~~~~~ki~vI~Ng-~~~~f~p~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (415)
T cd03816 173 EDLQ----------------QFNNWKIRATVLYDR-PPEQFRPLPLEE----KHELFLKLAKTFLTRELRIGAVQLSEER 231 (415)
T ss_pred HHHH----------------hhhccCCCeeecCCC-CHHHceeCcHHH----HHHHHHhccccccccccccccceecCCC
Confidence 3221 112235688999999 556676542111 0111110 0 123
Q ss_pred CceEEEeecccccCCHHHHHHHHHHhHHh------CCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCc
Q 002285 374 RKVMLGVDRLDMIKGIPQKILAFEKFLEE------NPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTL 447 (942)
Q Consensus 374 ~~iIl~VgRLd~~KGi~~lL~Af~~ll~~------~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~ 447 (942)
.++++++||+.+.||+..+|+|+..+.+. +|+ +.|+++ |+|+.. +++++++.+.+.
T Consensus 232 ~~vi~~~grl~~~K~~~~li~A~~~l~~~~~~~~~~~~----i~l~iv-----G~G~~~----~~l~~~~~~~~l----- 293 (415)
T cd03816 232 PALLVSSTSWTPDEDFGILLDALVAYEKSAATGPKLPK----LLCIIT-----GKGPLK----EKYLERIKELKL----- 293 (415)
T ss_pred ceEEEEeccccCCCCHHHHHHHHHHHHHhhcccccCCC----EEEEEE-----ecCccH----HHHHHHHHHcCC-----
Confidence 46788999999999999999999998763 355 456655 456543 344455544332
Q ss_pred CcccEEEeCCCCCHHHHHHHHHHccEEEECC---CCCCCChhHHHHHhhccCCCceEEEeCCCCccccc--CCceEEECC
Q 002285 448 TTVPIHHLDRSLDFHALCALYAITDVALVTS---LRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSL--GAGAILVNP 522 (942)
Q Consensus 448 ~~~pV~~l~~~v~~~el~aly~~ADv~v~pS---l~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l--g~~gllVnP 522 (942)
..++++.+.++.+++..+|++||++|+++ ..+|||++++||||| +.|+|+|+.+|..+.+ |.+|++|+
T Consensus 294 --~~~~~~~g~~~~~~~~~~l~~aDv~v~~~~~~~~~~~p~~~~Eama~----G~PVI~s~~~~~~eiv~~~~~G~lv~- 366 (415)
T cd03816 294 --KKVTIRTPWLSAEDYPKLLASADLGVSLHTSSSGLDLPMKVVDMFGC----GLPVCALDFKCIDELVKHGENGLVFG- 366 (415)
T ss_pred --CcEEEEcCcCCHHHHHHHHHhCCEEEEccccccccCCcHHHHHHHHc----CCCEEEeCCCCHHHHhcCCCCEEEEC-
Confidence 24677788899999999999999999743 348899999999999 3578999988888877 67899994
Q ss_pred CCHHHHHHHHHHHhCCC--HHHHHHHHHHHhHHHHh
Q 002285 523 WNITEVASSIGYALNMP--ADEREKRHLHNFMHVTT 556 (942)
Q Consensus 523 ~D~~~lA~aI~~aL~m~--~~er~~r~~~~~~~v~~ 556 (942)
|++++|++|..+++++ +++++++.++++++.+.
T Consensus 367 -d~~~la~~i~~ll~~~~~~~~~~~m~~~~~~~~~~ 401 (415)
T cd03816 367 -DSEELAEQLIDLLSNFPNRGKLNSLKKGAQEESEL 401 (415)
T ss_pred -CHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhhhc
Confidence 9999999999999973 66777777777777643
No 80
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=99.82 E-value=5.5e-18 Score=187.09 Aligned_cols=273 Identities=20% Similarity=0.161 Sum_probs=188.0
Q ss_pred CCCEEEEcCCchhhHHHHHHhhCCCCeEEEEeccCCCChhHhhcCCc--hHHHHH-HhhhccEEeecCHHHHHHHHHHHH
Q 002285 242 EGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSSEIHRTLPS--RTELLR-SVLAADLVGFHTYDYARHFVSACT 318 (942)
Q Consensus 242 ~~DiIwvHDyhL~llp~~Lr~~~p~~~I~~flH~PfP~~e~fr~lp~--r~~il~-~ll~aDlIgF~t~~~~~~Fl~~~~ 318 (942)
.+|+|++|..+..++..++++.....++.+.+|...+... ...... ...+.+ .+..+|.+.+.+....+.+.+.
T Consensus 80 ~~dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~-- 156 (359)
T cd03808 80 RPDIVHTHTPKPGILGRLAARLAGVPKVIYTVHGLGFVFT-SGGLKRRLYLLLERLALRFTDKVIFQNEDDRDLALKL-- 156 (359)
T ss_pred CCCEEEEccccchhHHHHHHHHcCCCCEEEEecCcchhhc-cchhHHHHHHHHHHHHHhhccEEEEcCHHHHHHHHHh--
Confidence 6799999987777677776665556777777776532211 000000 011111 2235788888887666655431
Q ss_pred HHhccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHhcCCceEEEeecccccCCHHHHHHHHHH
Q 002285 319 RILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERFAGRKVMLGVDRLDMIKGIPQKILAFEK 398 (942)
Q Consensus 319 r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi~~lL~Af~~ 398 (942)
+. ......+.+.|+|+|.+.+...... ...+++.|+++||+.+.||+..+++|++.
T Consensus 157 ---~~---------~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~i~~~G~~~~~k~~~~li~~~~~ 212 (359)
T cd03808 157 ---GI---------IKKKKTVLIPGSGVDLDRFSPSPEP------------IPEDDPVFLFVARLLKDKGIDELLEAARI 212 (359)
T ss_pred ---cC---------CCcCceEEecCCCCChhhcCccccc------------cCCCCcEEEEEeccccccCHHHHHHHHHH
Confidence 00 0013467788999999877543210 12467899999999999999999999999
Q ss_pred hHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEECC
Q 002285 399 FLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVTS 478 (942)
Q Consensus 399 ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~pS 478 (942)
+.+.+|++ .|+.+|.. +........ ++...+.. ..|.|++ . .+++..+|+.||++++||
T Consensus 213 l~~~~~~~----~l~i~G~~-----~~~~~~~~~---~~~~~~~~------~~v~~~g-~--~~~~~~~~~~adi~i~ps 271 (359)
T cd03808 213 LKAKGPNV----RLLLVGDG-----DEENPAAIL---EIEKLGLE------GRVEFLG-F--RDDVPELLAAADVFVLPS 271 (359)
T ss_pred HHhcCCCe----EEEEEcCC-----CcchhhHHH---HHHhcCCc------ceEEEee-c--cccHHHHHHhccEEEecC
Confidence 98877774 45555432 211111111 12222211 1355544 3 678999999999999999
Q ss_pred CCCCCChhHHHHHhhccCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHH-HH
Q 002285 479 LRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVASSIGYALNMPADEREKRHLHNFMH-VT 555 (942)
Q Consensus 479 l~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~-v~ 555 (942)
..||+|++++|||+| +.|+|+|+.+|..+.+ +.+|+++++.|+++++++|.+++..+ +.+.++..+++++ ..
T Consensus 272 ~~e~~~~~~~Ea~~~----G~Pvi~s~~~~~~~~i~~~~~g~~~~~~~~~~~~~~i~~l~~~~-~~~~~~~~~~~~~~~~ 346 (359)
T cd03808 272 YREGLPRVLLEAMAM----GRPVIATDVPGCREAVIDGVNGFLVPPGDAEALADAIERLIEDP-ELRARMGQAARKRAEE 346 (359)
T ss_pred cccCcchHHHHHHHc----CCCEEEecCCCchhhhhcCcceEEECCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHH
Confidence 999999999999999 3579999999988877 57899999999999999999988754 4566666777777 68
Q ss_pred hcCHHHHHHHHH
Q 002285 556 THTSQEWAATFV 567 (942)
Q Consensus 556 ~~~~~~W~~~fl 567 (942)
.++...+++.++
T Consensus 347 ~~s~~~~~~~~~ 358 (359)
T cd03808 347 EFDEEIVVKKLL 358 (359)
T ss_pred hcCHHHHHHHhh
Confidence 899998888775
No 81
>PHA01630 putative group 1 glycosyl transferase
Probab=99.81 E-value=3.2e-18 Score=192.51 Aligned_cols=214 Identities=11% Similarity=0.055 Sum_probs=151.4
Q ss_pred hccEEeecCHHHHHHHHHHHHHHhccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHhcCCceE
Q 002285 298 AADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERFAGRKVM 377 (942)
Q Consensus 298 ~aDlIgF~t~~~~~~Fl~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iI 377 (942)
.+|.|...+......+.+ .+. ....++.++|+|||++.|.+... ...++.++
T Consensus 94 ~ad~ii~~S~~~~~~l~~-----~g~----------~~~~~i~vIpNGVd~~~f~~~~~-------------~~~~~~vl 145 (331)
T PHA01630 94 PVDEIVVPSQWSKNAFYT-----SGL----------KIPQPIYVIPHNLNPRMFEYKPK-------------EKPHPCVL 145 (331)
T ss_pred cCCEEEECCHHHHHHHHH-----cCC----------CCCCCEEEECCCCCHHHcCCCcc-------------ccCCCEEE
Confidence 478887777655444432 110 01247889999999988864311 01244566
Q ss_pred EEeecccccCCHHHHHHHHHHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCC
Q 002285 378 LGVDRLDMIKGIPQKILAFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDR 457 (942)
Q Consensus 378 l~VgRLd~~KGi~~lL~Af~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~ 457 (942)
++++|+.+.||++.+|+|++++.+++|++ .|+++| +++.. . ++. .++ + +.+
T Consensus 146 ~~~g~~~~~Kg~d~Li~A~~~l~~~~~~~----~llivG-----~~~~~--~--~l~----~~~------~------~~~ 196 (331)
T PHA01630 146 AILPHSWDRKGGDIVVKIFHELQNEGYDF----YFLIKS-----SNMLD--P--RLF----GLN------G------VKT 196 (331)
T ss_pred EEeccccccCCHHHHHHHHHHHHhhCCCE----EEEEEe-----Ccccc--h--hhc----ccc------c------eec
Confidence 67789999999999999999998887764 455554 22211 1 110 011 1 134
Q ss_pred CCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhccCCCceEEEeCCCCccccc--CCceEEECC-------------
Q 002285 458 SLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSL--GAGAILVNP------------- 522 (942)
Q Consensus 458 ~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l--g~~gllVnP------------- 522 (942)
.++.+++..+|+.||+||+||..||||++++||||| +.|+|+|+.+|..+.+ |.+|++|++
T Consensus 197 ~v~~~~l~~~y~~aDv~v~pS~~E~fgl~~lEAMA~----G~PVIas~~gg~~E~i~~~~ng~lv~~~~~~~~~~~~~~~ 272 (331)
T PHA01630 197 PLPDDDIYSLFAGCDILFYPVRGGAFEIPVIEALAL----GLDVVVTEKGAWSEWVLSNLDVYWIKSGRKPKLWYTNPIH 272 (331)
T ss_pred cCCHHHHHHHHHhCCEEEECCccccCChHHHHHHHc----CCCEEEeCCCCchhhccCCCceEEeeecccccccccCCcc
Confidence 578899999999999999999999999999999999 3579999988878877 556666642
Q ss_pred ------CCHHHHHHHHHHHhCCC-HHHHHHHH-HHHhHHHHhcCHHHHHHHHHHHHHH
Q 002285 523 ------WNITEVASSIGYALNMP-ADEREKRH-LHNFMHVTTHTSQEWAATFVSELND 572 (942)
Q Consensus 523 ------~D~~~lA~aI~~aL~m~-~~er~~r~-~~~~~~v~~~~~~~W~~~fl~~L~~ 572 (942)
.|.++++++|.++|.++ ++++++++ .......++|+++..++++++.+++
T Consensus 273 ~G~~v~~~~~~~~~~ii~~l~~~~~~~~~~~~~~~~~~~~~~fs~~~ia~k~~~l~~~ 330 (331)
T PHA01630 273 VGYFLDPDIEDAYQKLLEALANWTPEKKKENLEGRAILYRENYSYNAIAKMWEKILEK 330 (331)
T ss_pred cccccCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 27788999999999864 23444444 4556678999999999999887753
No 82
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=99.81 E-value=1.5e-18 Score=189.46 Aligned_cols=191 Identities=17% Similarity=0.241 Sum_probs=122.8
Q ss_pred CEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccCc-----eEE
Q 002285 602 NRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYNM-----WLA 676 (942)
Q Consensus 602 ~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l-----~li 676 (942)
.|+|++|+||||++. +..++++++++|++|.+ .|+.|+|+|||++..+.+.+..+++ ++|
T Consensus 3 ~kli~~DlDGTLl~~--------------~~~i~~~~~~ai~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~I 67 (270)
T PRK10513 3 IKLIAIDMDGTLLLP--------------DHTISPAVKQAIAAARA-KGVNVVLTTGRPYAGVHRYLKELHMEQPGDYCI 67 (270)
T ss_pred eEEEEEecCCcCcCC--------------CCccCHHHHHHHHHHHH-CCCEEEEecCCChHHHHHHHHHhCCCCCCCeEE
Confidence 589999999999985 45689999999999987 6999999999999999988887753 589
Q ss_pred eecceEEEe-CCCc--eeecccCCCChhHHHHHHHHHHHHHhcC--------CCeeeeeecce-----------EEEEEe
Q 002285 677 AENGMFLRL-TTGE--WMTTMPENLNMDWVDSVKHVFEYFTERT--------PRSHFEVRETS-----------LVWNYK 734 (942)
Q Consensus 677 aehG~~ir~-~~~~--w~~~~~~~~~~~w~~~v~~il~~~~~r~--------~Gs~iE~K~~s-----------l~~hyr 734 (942)
+.||+.+.. .++. +... .+. +.+..+++...+.. .+.+...+... +...+.
T Consensus 68 ~~NGa~i~~~~~~~~i~~~~----l~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (270)
T PRK10513 68 TNNGALVQKAADGETVAQTA----LSY---DDYLYLEKLSREVGVHFHALDRNTLYTANRDISYYTVHESFLTGIPLVFR 140 (270)
T ss_pred EcCCeEEEECCCCCEEEecC----CCH---HHHHHHHHHHHHcCCcEEEEECCEEEEecCCcchhHHHhhhhccCCcccc
Confidence 999999984 2232 2221 222 23333333322110 11121111100 000000
Q ss_pred cc---chH--H------h-HHHHHHHHHHHhcCCCCCCCeEEE-EcCcEEEEEECCCCHHHHHHHHHHHhcccCCCCCCC
Q 002285 735 YA---DLE--F------G-RLQARDILQHLWSGPISNASVDVV-QGGRSVEVRAVGVTKGAAIDRILGEIVRHKGLKTPI 801 (942)
Q Consensus 735 ~a---d~e--~------~-~~qa~el~~~L~~~~~~~~~v~v~-~G~~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~ 801 (942)
.. ++. . . .....++...+ ...+. ..+.++ .+..++||.|+|+|||.|+++|+++++ ++.
T Consensus 141 ~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~s~~~~~eI~~~gvsKg~al~~l~~~~g------i~~ 212 (270)
T PRK10513 141 EVEKMDPNLQFPKVMMIDEPEILDAAIARI-PAEVK-ERYTVLKSAPYFLEILDKRVNKGTGVKSLAEHLG------IKP 212 (270)
T ss_pred chhhccccCCceEEEEeCCHHHHHHHHHHh-HHHhc-CcEEEEEecCeeEEEeCCCCChHHHHHHHHHHhC------CCH
Confidence 00 000 0 0 00112222223 11111 234443 467799999999999999999999998 678
Q ss_pred ceEEEEeCCCCCCHHHHHhcCc
Q 002285 802 DYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 802 d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
+.+++||| +.||.+||+.++.
T Consensus 213 ~~v~afGD-~~NDi~Ml~~ag~ 233 (270)
T PRK10513 213 EEVMAIGD-QENDIAMIEYAGV 233 (270)
T ss_pred HHEEEECC-chhhHHHHHhCCc
Confidence 99999999 9999999999865
No 83
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.80 E-value=1.6e-17 Score=186.09 Aligned_cols=265 Identities=20% Similarity=0.198 Sum_probs=177.1
Q ss_pred CCCCEEEEcCCchhhHHHHHHhhCCCCeEEEEeccCCCChhHhhcCCchHHH-HHHhhhccEEeecCHHHHHHHHHHHHH
Q 002285 241 EEGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSSEIHRTLPSRTEL-LRSVLAADLVGFHTYDYARHFVSACTR 319 (942)
Q Consensus 241 ~~~DiIwvHDyhL~llp~~Lr~~~p~~~I~~flH~PfP~~e~fr~lp~r~~i-l~~ll~aDlIgF~t~~~~~~Fl~~~~r 319 (942)
.++|+||+|....+.....+... .+.+..+++|........+. .....+ ...+..+|.|.+.+..+.+.+..
T Consensus 82 ~~~Dii~~~~~~~~~~~~~~~~~-~~~~~i~~~h~~~~~~~~~~--~~~~~~~~~~~~~~d~vi~~s~~~~~~~~~---- 154 (357)
T cd03795 82 KKADVIHLHFPNPLADLALLLLP-RKKPVVVHWHSDIVKQKLLL--KLYRPLQRRFLRRADAIVATSPNYAETSPV---- 154 (357)
T ss_pred CCCCEEEEecCcchHHHHHHHhc-cCceEEEEEcChhhccchhh--hhhhHHHHHHHHhcCEEEeCcHHHHHHHHH----
Confidence 47899999986544332222222 46677888886432211111 011112 22445688887777655543321
Q ss_pred HhccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHhcCCceEEEeecccccCCHHHHHHHHHHh
Q 002285 320 ILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKF 399 (942)
Q Consensus 320 ~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi~~lL~Af~~l 399 (942)
+ .....++.++|+|+|...|.+.... .........++++|+++||+.+.||+..+++|++++
T Consensus 155 ~------------~~~~~~~~~i~~gi~~~~~~~~~~~------~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l 216 (357)
T cd03795 155 L------------RRFRDKVRVIPLGLDPARYPRPDAL------EEAIWRRAAGRPFFLFVGRLVYYKGLDVLLEAAAAL 216 (357)
T ss_pred h------------cCCccceEEecCCCChhhcCCcchh------hhHhhcCCCCCcEEEEecccccccCHHHHHHHHHhc
Confidence 1 1112578899999999877643211 001111124678999999999999999999999987
Q ss_pred HHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEECCC
Q 002285 400 LEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVTSL 479 (942)
Q Consensus 400 l~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~pSl 479 (942)
. + +.|+.+| +++... ++.+++.+.+.. ..|+ +.+.++.+++..+|+.||++++||.
T Consensus 217 ~----~----~~l~i~G-----~g~~~~----~~~~~~~~~~~~------~~V~-~~g~v~~~~~~~~~~~ad~~i~ps~ 272 (357)
T cd03795 217 P----D----APLVIVG-----EGPLEA----ELEALAAALGLL------DRVR-FLGRLDDEEKAALLAACDVFVFPSV 272 (357)
T ss_pred c----C----cEEEEEe-----CChhHH----HHHHHHHhcCCc------ceEE-EcCCCCHHHHHHHHHhCCEEEeCCc
Confidence 4 2 4555553 444333 344444333211 1255 4689999999999999999999997
Q ss_pred --CCCCChhHHHHHhhccCCCceEEEeCCCCccccc---CCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHH
Q 002285 480 --RDGMNLVSYEFVACQASKKGVLILSEFAGAAQSL---GAGAILVNPWNITEVASSIGYALNMPADEREKRHLHNFMHV 554 (942)
Q Consensus 480 --~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l---g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v 554 (942)
.||+|++++|||+| +.|+|+|+.+|..+.+ +.+|+++++.|+++++++|.+++++ +++++++.+++++++
T Consensus 273 ~~~e~~g~~~~Ea~~~----g~Pvi~~~~~~~~~~i~~~~~~g~~~~~~d~~~~~~~i~~l~~~-~~~~~~~~~~~~~~~ 347 (357)
T cd03795 273 ERSEAFGIVLLEAMAF----GKPVISTEIGTGGSYVNLHGVTGLVVPPGDPAALAEAIRRLLED-PELRERLGEAARERA 347 (357)
T ss_pred ccccccchHHHHHHHc----CCCEEecCCCCchhHHhhCCCceEEeCCCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHH
Confidence 59999999999999 3578888888877765 5689999999999999999999985 456777777788776
Q ss_pred Hh-cCH
Q 002285 555 TT-HTS 559 (942)
Q Consensus 555 ~~-~~~ 559 (942)
.+ +++
T Consensus 348 ~~~~s~ 353 (357)
T cd03795 348 EEEFTA 353 (357)
T ss_pred HHhcch
Confidence 43 443
No 84
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=99.80 E-value=1.2e-17 Score=185.90 Aligned_cols=243 Identities=17% Similarity=0.119 Sum_probs=162.5
Q ss_pred CCCCEEEEcCCchhhHHHHHHhhCCCCeEEEEeccCCCChhHhhcCCchHHHHHHhhhccEEeecCHHHHHHHHHHHHHH
Q 002285 241 EEGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSSEIHRTLPSRTELLRSVLAADLVGFHTYDYARHFVSACTRI 320 (942)
Q Consensus 241 ~~~DiIwvHDyhL~llp~~Lr~~~p~~~I~~flH~PfP~~e~fr~lp~r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~ 320 (942)
.+.|+||+|+....++ + .+..+.++.+++|..+..... .........+.+.+-+......+
T Consensus 86 ~~~Divh~~~~~~~~~---~-~~~~~~~~v~~~h~~~~~~~~--------~~~~~~~~~~~~~~~s~~~~~~~------- 146 (335)
T cd03802 86 GDFDIVHNHSLHLPLP---F-ARPLPVPVVTTLHGPPDPELL--------KLYYAARPDVPFVSISDAQRRPW------- 146 (335)
T ss_pred CCCCEEEecCcccchh---h-hcccCCCEEEEecCCCCcccc--------hHHHhhCcCCeEEEecHHHHhhc-------
Confidence 3689999999877665 2 234567888899987643211 12223333444333222211110
Q ss_pred hccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHhcCCceEEEeecccccCCHHHHHHHHHHhH
Q 002285 321 LGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFL 400 (942)
Q Consensus 321 l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi~~lL~Af~~ll 400 (942)
... .++.++|+|||.+.|.+. ..++.+|+++||+.+.||+..+++|+++
T Consensus 147 ------------~~~-~~~~vi~ngvd~~~~~~~----------------~~~~~~i~~~Gr~~~~Kg~~~li~~~~~-- 195 (335)
T cd03802 147 ------------PPL-PWVATVHNGIDLDDYPFR----------------GPKGDYLLFLGRISPEKGPHLAIRAARR-- 195 (335)
T ss_pred ------------ccc-cccEEecCCcChhhCCCC----------------CCCCCEEEEEEeeccccCHHHHHHHHHh--
Confidence 001 568899999999888642 1245689999999999999999999764
Q ss_pred HhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEECCC-
Q 002285 401 EENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVTSL- 479 (942)
Q Consensus 401 ~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~pSl- 479 (942)
+++ .|+++| +++....+...+.+... ++ ..|+ +.|.++.+++..+|+.||++|+||.
T Consensus 196 ---~~~----~l~i~G-----~~~~~~~~~~~~~~~~~-~~--------~~v~-~~G~~~~~~~~~~~~~~d~~v~ps~~ 253 (335)
T cd03802 196 ---AGI----PLKLAG-----PVSDPDYFYREIAPELL-DG--------PDIE-YLGEVGGAEKAELLGNARALLFPILW 253 (335)
T ss_pred ---cCC----eEEEEe-----CCCCHHHHHHHHHHhcc-cC--------CcEE-EeCCCCHHHHHHHHHhCcEEEeCCcc
Confidence 243 455554 33222222222222211 11 1255 4678999999999999999999998
Q ss_pred CCCCChhHHHHHhhccCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhH-HHHh
Q 002285 480 RDGMNLVSYEFVACQASKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVASSIGYALNMPADEREKRHLHNFM-HVTT 556 (942)
Q Consensus 480 ~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~-~v~~ 556 (942)
.||||++++||||| +.|+|+|+.+|..+.+ |.+|+++++ +++++++|.+++..+.+. +++ ..++
T Consensus 254 ~E~~~~~~lEAma~----G~PvI~~~~~~~~e~i~~~~~g~l~~~--~~~l~~~l~~l~~~~~~~-------~~~~~~~~ 320 (335)
T cd03802 254 EEPFGLVMIEAMAC----GTPVIAFRRGAVPEVVEDGVTGFLVDS--VEELAAAVARADRLDRAA-------CRRRAERR 320 (335)
T ss_pred cCCcchHHHHHHhc----CCCEEEeCCCCchhheeCCCcEEEeCC--HHHHHHHHHHHhccHHHH-------HHHHHHHh
Confidence 59999999999999 3589999999988877 458999987 999999999997654321 112 2367
Q ss_pred cCHHHHHHHHHH
Q 002285 557 HTSQEWAATFVS 568 (942)
Q Consensus 557 ~~~~~W~~~fl~ 568 (942)
|+++.-++++++
T Consensus 321 ~s~~~~~~~~~~ 332 (335)
T cd03802 321 FSAARMVDDYLA 332 (335)
T ss_pred CCHHHHHHHHHH
Confidence 788877777765
No 85
>PRK10976 putative hydrolase; Provisional
Probab=99.79 E-value=3e-18 Score=186.85 Aligned_cols=193 Identities=18% Similarity=0.268 Sum_probs=125.4
Q ss_pred CEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccC--ceEEeec
Q 002285 602 NRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYN--MWLAAEN 679 (942)
Q Consensus 602 ~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~--l~liaeh 679 (942)
.|||++|+||||++. +..++++++++|++|.+ .|+.|+|+|||+...+.+++..++ .++|+.|
T Consensus 2 ikli~~DlDGTLl~~--------------~~~is~~~~~ai~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~N 66 (266)
T PRK10976 2 YQVVASDLDGTLLSP--------------DHTLSPYAKETLKLLTA-RGIHFVFATGRHHVDVGQIRDNLEIKSYMITSN 66 (266)
T ss_pred ceEEEEeCCCCCcCC--------------CCcCCHHHHHHHHHHHH-CCCEEEEEcCCChHHHHHHHHhcCCCCeEEEcC
Confidence 479999999999986 34689999999999997 799999999999999999888774 4789999
Q ss_pred ceEEEeCCCceeecccCCCChhHHHHHHHHHHHHHhcCCCe--eeeeecceEE---------------EEEeccchH---
Q 002285 680 GMFLRLTTGEWMTTMPENLNMDWVDSVKHVFEYFTERTPRS--HFEVRETSLV---------------WNYKYADLE--- 739 (942)
Q Consensus 680 G~~ir~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~r~~Gs--~iE~K~~sl~---------------~hyr~ad~e--- 739 (942)
|+.+...++.. +.....+ .+.+.++++...+ .++. .+...+..+. ..+...+.+
T Consensus 67 Ga~i~~~~~~~--i~~~~l~---~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (266)
T PRK10976 67 GARVHDTDGNL--IFSHNLD---RDIASDLFGVVHD-NPDIITNVYRDDEWFMNRHRPEEMRFFKEAVFKYQLYEPGLLE 140 (266)
T ss_pred CcEEECCCCCE--ehhhcCC---HHHHHHHHHhhcc-cCCEEEEEEcCCeEEEcCCChHHHHHHHhcCCcceeechhhcc
Confidence 99998533332 1111122 3445555544321 1111 1111000000 000000000
Q ss_pred ---H--------hHHHHHHHHHHHhcCCCCCCCeEE-EEcCcEEEEEECCCCHHHHHHHHHHHhcccCCCCCCCceEEEE
Q 002285 740 ---F--------GRLQARDILQHLWSGPISNASVDV-VQGGRSVEVRAVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCI 807 (942)
Q Consensus 740 ---~--------~~~qa~el~~~L~~~~~~~~~v~v-~~G~~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~i 807 (942)
. ......++.+.+ ...+. ..+.+ ..+..++||.|+|+|||.||++|++++| ++.+.+++|
T Consensus 141 ~~~i~ki~~~~~~~~~~~~~~~~l-~~~~~-~~~~~~~s~~~~~eI~~~gvsKg~al~~l~~~lg------i~~~~viaf 212 (266)
T PRK10976 141 PDGVSKVFFTCDSHEKLLPLEQAI-NARWG-DRVNVSFSTLTCLEVMAGGVSKGHALEAVAKKLG------YSLKDCIAF 212 (266)
T ss_pred cCCceEEEEEcCCHHHHHHHHHHH-HHHhC-CcEEEEEeCCceEEEEcCCCChHHHHHHHHHHcC------CCHHHeEEE
Confidence 0 000111222223 21111 23444 3456799999999999999999999998 678999999
Q ss_pred eCCCCCCHHHHHhcCcC
Q 002285 808 GHFLQKDEDIYTFFEPE 824 (942)
Q Consensus 808 GD~d~nDEdMF~~~~~~ 824 (942)
|| +.||.+||++++..
T Consensus 213 GD-~~NDi~Ml~~ag~~ 228 (266)
T PRK10976 213 GD-GMNDAEMLSMAGKG 228 (266)
T ss_pred cC-CcccHHHHHHcCCC
Confidence 99 99999999999874
No 86
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=99.79 E-value=1.9e-17 Score=186.87 Aligned_cols=249 Identities=20% Similarity=0.176 Sum_probs=166.1
Q ss_pred CCCCEEEEcCCchhhHHHHHHhhCCCCeEEEEeccCCCC----h-hHhhcCCc-------------hHHHHHHhhhccEE
Q 002285 241 EEGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPS----S-EIHRTLPS-------------RTELLRSVLAADLV 302 (942)
Q Consensus 241 ~~~DiIwvHDyhL~llp~~Lr~~~p~~~I~~flH~PfP~----~-e~fr~lp~-------------r~~il~~ll~aDlI 302 (942)
.+.|+|+++...... .++ ..+..+..+++|.|.+- . ......+. +......+..+|.|
T Consensus 82 ~~~D~v~~~~~~~~~--~~~--~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i 157 (351)
T cd03804 82 SGYDLVISSSHAVAK--GVI--TRPDQLHICYCHTPMRYAWDLYHDYLKESGLGKRLALRLLLHYLRIWDRRSAARVDYF 157 (351)
T ss_pred cCCCEEEEcCcHHhc--ccc--CCCCCcEEEEeCCchHHHhcCchHhhhhcccchhhHHHHHHHHHHHHHHHHhcCCCEE
Confidence 478999887642221 122 34567778888986311 0 01111110 00011223456766
Q ss_pred eecCHHHHHHHHHHHHHHhccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHhcCCceEEEeec
Q 002285 303 GFHTYDYARHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERFAGRKVMLGVDR 382 (942)
Q Consensus 303 gF~t~~~~~~Fl~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgR 382 (942)
...+....+.+.+ . .+ .+..++|+|+|.+.|.+.. ...++++++||
T Consensus 158 i~~S~~~~~~~~~----~------------~~--~~~~vi~~~~d~~~~~~~~----------------~~~~~il~~G~ 203 (351)
T cd03804 158 IANSRFVARRIKK----Y------------YG--RDATVIYPPVDTDRFTPAE----------------EKEDYYLSVGR 203 (351)
T ss_pred EECCHHHHHHHHH----H------------hC--CCcEEECCCCCHhhcCcCC----------------CCCCEEEEEEc
Confidence 6666554444422 1 11 1346789999998775421 23457999999
Q ss_pred ccccCCHHHHHHHHHHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHH
Q 002285 383 LDMIKGIPQKILAFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFH 462 (942)
Q Consensus 383 Ld~~KGi~~lL~Af~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~ 462 (942)
+.+.||++.+|+|++++ | ++ ++++ |++++.+.+++ ... ..|.| .+.++.+
T Consensus 204 ~~~~K~~~~li~a~~~~----~-~~--l~iv-------G~g~~~~~l~~-------~~~--------~~V~~-~g~~~~~ 253 (351)
T cd03804 204 LVPYKRIDLAIEAFNKL----G-KR--LVVI-------GDGPELDRLRA-------KAG--------PNVTF-LGRVSDE 253 (351)
T ss_pred CccccChHHHHHHHHHC----C-Cc--EEEE-------ECChhHHHHHh-------hcC--------CCEEE-ecCCCHH
Confidence 99999999999999875 3 33 4444 45554433332 111 13554 5789999
Q ss_pred HHHHHHHHccEEEECCCCCCCChhHHHHHhhccCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHhCCCH
Q 002285 463 ALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVASSIGYALNMPA 540 (942)
Q Consensus 463 el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~ 540 (942)
++.++|+.||++++||. ||||++++||||| +.|+|+|..+|..+.+ +.+|++++|.|++++|++|..+++++.
T Consensus 254 ~~~~~~~~ad~~v~ps~-e~~g~~~~Eama~----G~Pvi~~~~~~~~e~i~~~~~G~~~~~~~~~~la~~i~~l~~~~~ 328 (351)
T cd03804 254 ELRDLYARARAFLFPAE-EDFGIVPVEAMAS----GTPVIAYGKGGALETVIDGVTGILFEEQTVESLAAAVERFEKNED 328 (351)
T ss_pred HHHHHHHhCCEEEECCc-CCCCchHHHHHHc----CCCEEEeCCCCCcceeeCCCCEEEeCCCCHHHHHHHHHHHHhCcc
Confidence 99999999999999999 9999999999999 3689999998888877 568999999999999999999998764
Q ss_pred HHHHHHHHHHhHHHHhcCHHHHHHHH
Q 002285 541 DEREKRHLHNFMHVTTHTSQEWAATF 566 (942)
Q Consensus 541 ~er~~r~~~~~~~v~~~~~~~W~~~f 566 (942)
. ..+.+.+.+..++.+++.+++
T Consensus 329 ~----~~~~~~~~~~~~~~~~~~~~~ 350 (351)
T cd03804 329 F----DPQAIRAHAERFSESRFREKI 350 (351)
T ss_pred c----CHHHHHHHHHhcCHHHHHHHh
Confidence 1 223344555667777766654
No 87
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.78 E-value=3.2e-17 Score=184.26 Aligned_cols=268 Identities=16% Similarity=0.044 Sum_probs=174.5
Q ss_pred CCCEEEEcCCchh--hHHHHHHhhCCCCeEEEEeccCCCChhHhhcCCchHHHH-----HHhhhccEEeecCHHHHHHHH
Q 002285 242 EGDVVWCHDYHLM--FLPQCLKEYNNNMKVGWFLHTPFPSSEIHRTLPSRTELL-----RSVLAADLVGFHTYDYARHFV 314 (942)
Q Consensus 242 ~~DiIwvHDyhL~--llp~~Lr~~~p~~~I~~flH~PfP~~e~fr~lp~r~~il-----~~ll~aDlIgF~t~~~~~~Fl 314 (942)
..|+++||..... .+..+++.. +.++.+.+|..-.....+.. ....++ ..+..+|.|...+....+.+.
T Consensus 84 ~~~~~~i~~~~~~~~~~~~~~~~~--~~~~v~~~h~~~~~~~~~~~--~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~ 159 (363)
T cd04955 84 KRDIDHVHALGPAIAPFLPLLRLK--GKKVVVNMDGLEWKRAKWGR--PAKRYLKFGEKLAVKFADRLIADSPGIKEYLK 159 (363)
T ss_pred cCCeEEEEecCccHHHHHHHHHhc--CCCEEEEccCcceeeccccc--chhHHHHHHHHHHHhhccEEEeCCHHHHHHHH
Confidence 3456666654433 333334332 67888888863111111110 001111 123457888776654444332
Q ss_pred HHHHHHhccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHH--hcCCceEEEeecccccCCHHHH
Q 002285 315 SACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKER--FAGRKVMLGVDRLDMIKGIPQK 392 (942)
Q Consensus 315 ~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~--~~~~~iIl~VgRLd~~KGi~~l 392 (942)
. .. |... .++|+|+|...+.+. . ..++. +.+++.|+++||+.+.||+..+
T Consensus 160 ~----~~------------~~~~--~~i~ngv~~~~~~~~---~-------~~~~~~~~~~~~~i~~~G~~~~~Kg~~~l 211 (363)
T cd04955 160 E----KY------------GRDS--TYIPYGADHVVSSEE---D-------EILKKYGLEPGRYYLLVGRIVPENNIDDL 211 (363)
T ss_pred H----hc------------CCCC--eeeCCCcChhhcchh---h-------hhHHhcCCCCCcEEEEEecccccCCHHHH
Confidence 1 11 1111 789999998766430 0 11122 2355678899999999999999
Q ss_pred HHHHHHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHcc
Q 002285 393 ILAFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITD 472 (942)
Q Consensus 393 L~Af~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~AD 472 (942)
++|+.++.. + +.|+++|. ++....+.+++.+. .+. . ..|+ +.+.++.+++..+|+.||
T Consensus 212 i~a~~~l~~---~----~~l~ivG~-----~~~~~~~~~~~~~~---~~~----~--~~V~-~~g~~~~~~~~~~~~~ad 269 (363)
T cd04955 212 IEAFSKSNS---G----KKLVIVGN-----ADHNTPYGKLLKEK---AAA----D--PRII-FVGPIYDQELLELLRYAA 269 (363)
T ss_pred HHHHHhhcc---C----ceEEEEcC-----CCCcchHHHHHHHH---hCC----C--CcEE-EccccChHHHHHHHHhCC
Confidence 999988743 3 45665643 22222233333321 111 1 1255 468899999999999999
Q ss_pred EEEECCCC-CCCChhHHHHHhhccCCCceEEEeCCCCcccccCCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHh
Q 002285 473 VALVTSLR-DGMNLVSYEFVACQASKKGVLILSEFAGAAQSLGAGAILVNPWNITEVASSIGYALNMPADEREKRHLHNF 551 (942)
Q Consensus 473 v~v~pSl~-EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~lg~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~ 551 (942)
++++||.. ||||++++||||| +.|+|+|+.+|..+.++.+|.++++.|. ++++|.++++++ +.+....++++
T Consensus 270 ~~v~ps~~~e~~~~~~~EAma~----G~PvI~s~~~~~~e~~~~~g~~~~~~~~--l~~~i~~l~~~~-~~~~~~~~~~~ 342 (363)
T cd04955 270 LFYLHGHSVGGTNPSLLEAMAY----GCPVLASDNPFNREVLGDKAIYFKVGDD--LASLLEELEADP-EEVSAMAKAAR 342 (363)
T ss_pred EEEeCCccCCCCChHHHHHHHc----CCCEEEecCCccceeecCCeeEecCchH--HHHHHHHHHhCH-HHHHHHHHHHH
Confidence 99999999 9999999999999 3689999988888777778999998876 999999999876 45666667777
Q ss_pred HHHH-hcCHHHHHHHHHHHH
Q 002285 552 MHVT-THTSQEWAATFVSEL 570 (942)
Q Consensus 552 ~~v~-~~~~~~W~~~fl~~L 570 (942)
+.+. .++++.-++++++.+
T Consensus 343 ~~~~~~fs~~~~~~~~~~~y 362 (363)
T cd04955 343 ERIREKYTWEKIADQYEELY 362 (363)
T ss_pred HHHHHhCCHHHHHHHHHHHh
Confidence 7775 489888888887643
No 88
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=99.78 E-value=3.1e-17 Score=180.36 Aligned_cols=246 Identities=20% Similarity=0.156 Sum_probs=164.4
Q ss_pred CCCEEEEcCC-chhhHHHHHHhhCCCCeEEEEeccCCCChhHhhcCCchHHHHHHhhhccEEeecCHHHHHHHHHHHHHH
Q 002285 242 EGDVVWCHDY-HLMFLPQCLKEYNNNMKVGWFLHTPFPSSEIHRTLPSRTELLRSVLAADLVGFHTYDYARHFVSACTRI 320 (942)
Q Consensus 242 ~~DiIwvHDy-hL~llp~~Lr~~~p~~~I~~flH~PfP~~e~fr~lp~r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~ 320 (942)
..|+|++|++ ...++..+ ..+. +.++.+.+|..++.... ...+........+..+|.+.+.+....+.+.+.
T Consensus 81 ~~dii~~~~~~~~~~~~~~-~~~~-~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~---- 153 (353)
T cd03811 81 KPDVVISHLTTTPNVLALL-AARL-GTKLIVWEHNSLSLELK-RKLRLLLLIRKLYRRADKIVAVSEGVKEDLLKL---- 153 (353)
T ss_pred CCCEEEEcCccchhHHHHH-Hhhc-CCceEEEEcCcchhhhc-cchhHHHHHHhhccccceEEEeccchhhhHHHh----
Confidence 6799999998 33333333 3333 78899999988753211 111111112334456788877766555444331
Q ss_pred hccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHhcCCceEEEeecccccCCHHHHHHHHHHhH
Q 002285 321 LGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFL 400 (942)
Q Consensus 321 l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi~~lL~Af~~ll 400 (942)
. .....++.++|+|+|.+.+......+ . .+ ....++.+|+++||+.+.||+..+++|+..+.
T Consensus 154 ~-----------~~~~~~~~vi~~~~~~~~~~~~~~~~-----~-~~-~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~l~ 215 (353)
T cd03811 154 L-----------GIPPDKIEVIYNPIDIEEIRALAEEP-----L-EL-GIPPDGPVILAVGRLSPQKGFDTLIRAFALLR 215 (353)
T ss_pred h-----------cCCccccEEecCCcChhhcCcccchh-----h-hc-CCCCCceEEEEEecchhhcChHHHHHHHHHhh
Confidence 1 11245788999999998776542210 0 00 11246788999999999999999999999998
Q ss_pred HhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEECCCC
Q 002285 401 EENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVTSLR 480 (942)
Q Consensus 401 ~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~pSl~ 480 (942)
+++++++ |+.+| +++....++ +++.+.+.. ..|.+ .+.+ +++..+|+.||++++||..
T Consensus 216 ~~~~~~~----l~i~G-----~~~~~~~~~----~~~~~~~~~------~~v~~-~g~~--~~~~~~~~~~d~~i~ps~~ 273 (353)
T cd03811 216 KEGPDAR----LVILG-----DGPLREELE----ALAKELGLA------DRVHF-LGFQ--SNPYPYLKAADLFVLSSRY 273 (353)
T ss_pred hcCCCce----EEEEc-----CCccHHHHH----HHHHhcCCC------ccEEE-eccc--CCHHHHHHhCCEEEeCccc
Confidence 8777654 55443 344333333 444443321 12444 4443 5688999999999999999
Q ss_pred CCCChhHHHHHhhccCCCceEEEeCCCCccccc--CCceEEECCCCHHHH---HHHHHHHhCC
Q 002285 481 DGMNLVSYEFVACQASKKGVLILSEFAGAAQSL--GAGAILVNPWNITEV---ASSIGYALNM 538 (942)
Q Consensus 481 EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l--g~~gllVnP~D~~~l---A~aI~~aL~m 538 (942)
||+|++++|||+| +.|+|+|+.+|..+.+ +.+|+++++.|.+++ +++|..++..
T Consensus 274 e~~~~~~~Ea~~~----G~PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~ 332 (353)
T cd03811 274 EGFPNVLLEAMAL----GTPVVATDCPGPREILEDGENGLLVPVGDEAALAAAALALLDLLLD 332 (353)
T ss_pred CCCCcHHHHHHHh----CCCEEEcCCCChHHHhcCCCceEEECCCCHHHHHHHHHHHHhccCC
Confidence 9999999999999 3578899999888877 578999999999999 4555555543
No 89
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=99.77 E-value=8.1e-18 Score=178.49 Aligned_cols=181 Identities=18% Similarity=0.236 Sum_probs=118.7
Q ss_pred EEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccC--ceEEeecceE
Q 002285 605 LILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYN--MWLAAENGMF 682 (942)
Q Consensus 605 i~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~--l~liaehG~~ 682 (942)
|++|+||||++. ...++++++++|++|.+ .|+.|+++|||+...+.+++..++ .++|++||+.
T Consensus 1 i~~DlDGTLl~~--------------~~~i~~~~~~al~~l~~-~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~ 65 (225)
T TIGR01482 1 IASDIDGTLTDP--------------NRAINESALEAIRKAES-VGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGE 65 (225)
T ss_pred CeEeccCccCCC--------------CcccCHHHHHHHHHHHH-CCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcE
Confidence 589999999975 34689999999999987 699999999999999988877764 5799999999
Q ss_pred EEeCCC---ceeecccCCCChhHHHHHHHHHHHHHhcCCCeeeeeecceEEEEEeccchHHhHHHHHHHHHHHhcCCCCC
Q 002285 683 LRLTTG---EWMTTMPENLNMDWVDSVKHVFEYFTERTPRSHFEVRETSLVWNYKYADLEFGRLQARDILQHLWSGPISN 759 (942)
Q Consensus 683 ir~~~~---~w~~~~~~~~~~~w~~~v~~il~~~~~r~~Gs~iE~K~~sl~~hyr~ad~e~~~~qa~el~~~L~~~~~~~ 759 (942)
+...++ .|.... ...|................-.+ .. ...+.......+++ .+.++..++ .
T Consensus 66 i~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~----~~~~~~~~~-----~- 129 (225)
T TIGR01482 66 ISYNEGMDDIFLAYL----EEEWFLDIVIAKTFPFSRLKVQY-PR-RASLVKMRYGIDVD----TVREIIKEL-----G- 129 (225)
T ss_pred EEeCCCCceEEeccc----CHHHHHHHHHhcccchhhhcccc-cc-ccceEEEeecCCHH----HHHHHHHhc-----C-
Confidence 985432 233222 22333221111100000000000 00 11111111112222 223333333 1
Q ss_pred CCeEEEEcCcEEEEEECCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCc
Q 002285 760 ASVDVVQGGRSVEVRAVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 760 ~~v~v~~G~~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
..+.+..+...+||.|++++||.|+++++++++ ++.+.+++||| +.||.+||+.++.
T Consensus 130 ~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~------i~~~~~i~~GD-~~NDi~m~~~ag~ 186 (225)
T TIGR01482 130 LNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLG------IKPGETLVCGD-SENDIDLFEVPGF 186 (225)
T ss_pred ceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhC------CCHHHEEEECC-CHhhHHHHHhcCc
Confidence 123334556799999999999999999999998 56789999999 9999999999975
No 90
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=99.77 E-value=2.1e-17 Score=176.47 Aligned_cols=185 Identities=18% Similarity=0.307 Sum_probs=125.9
Q ss_pred EEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccC--ceEEeecceE
Q 002285 605 LILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYN--MWLAAENGMF 682 (942)
Q Consensus 605 i~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~--l~liaehG~~ 682 (942)
||+|+||||++. +..++++++++|++|.+ .|+.++|+|||++..+.+++..++ .++|++||+.
T Consensus 1 i~~DlDGTLl~~--------------~~~i~~~~~~al~~l~~-~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~ 65 (254)
T PF08282_consen 1 IFSDLDGTLLNS--------------DGKISPETIEALKELQE-KGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGAL 65 (254)
T ss_dssp EEEECCTTTCST--------------TSSSCHHHHHHHHHHHH-TTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTE
T ss_pred cEEEECCceecC--------------CCeeCHHHHHHHHhhcc-cceEEEEEccCcccccccccccccchhhhcccccce
Confidence 689999999985 34589999999999998 699999999999999999999884 5999999999
Q ss_pred EEeCCCceeecccCCCChhHHHHHHHHHHHHHhcCCCeeeeeecc-----------------------------------
Q 002285 683 LRLTTGEWMTTMPENLNMDWVDSVKHVFEYFTERTPRSHFEVRET----------------------------------- 727 (942)
Q Consensus 683 ir~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~r~~Gs~iE~K~~----------------------------------- 727 (942)
+....++.... ...+ .+.+..+++......-...+...+.
T Consensus 66 i~~~~~~~l~~--~~i~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (254)
T PF08282_consen 66 IDDPKGKILYE--KPID---SDDVKKILKYLKEHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEE 140 (254)
T ss_dssp EEETTTEEEEE--ESB----HHHHHHHHHHHHHTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSS
T ss_pred eeecccccchh--hhee---ccchhheeehhhhcccccccccceeeecccccccchhhhhhccccccccccccccccccc
Confidence 94333332111 1122 3455555555443221111111100
Q ss_pred --eEEEEEeccchHHhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEECCCCHHHHHHHHHHHhcccCCCCCCCceEE
Q 002285 728 --SLVWNYKYADLEFGRLQARDILQHLWSGPISNASVDVVQGGRSVEVRAVGVTKGAAIDRILGEIVRHKGLKTPIDYVL 805 (942)
Q Consensus 728 --sl~~hyr~ad~e~~~~qa~el~~~L~~~~~~~~~v~v~~G~~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl 805 (942)
.+.++ .++ .+...+.+++ .......-..+..+..++||.|+++|||.|++.++++++ ++.+.++
T Consensus 141 i~ki~~~---~~~----~~~~~l~~~l-~~~~~~~~~~~~~~~~~lei~~~~vsK~~ai~~l~~~~~------i~~~~~~ 206 (254)
T PF08282_consen 141 IFKILFF---PDP----EDLEQLREEL-KKKFPNLIDVVRSSPYFLEITPKGVSKGSAIKYLLEYLG------ISPEDII 206 (254)
T ss_dssp ESEEEEE---SCH----HHHHHHHHHH-HHHHTTTEEEEEEETTEEEEEETTSSHHHHHHHHHHHHT------TSGGGEE
T ss_pred ceeeecc---ccc----hhhhhhhhhh-ccccCcceeEEEecccceEEeeCCCCHHHHHHHHhhhcc------cccceeE
Confidence 00100 011 1122333333 211111113345679999999999999999999999998 5689999
Q ss_pred EEeCCCCCCHHHHHhcCcC
Q 002285 806 CIGHFLQKDEDIYTFFEPE 824 (942)
Q Consensus 806 ~iGD~d~nDEdMF~~~~~~ 824 (942)
+||| +.||.+||+.++..
T Consensus 207 ~~GD-~~ND~~Ml~~~~~~ 224 (254)
T PF08282_consen 207 AFGD-SENDIEMLELAGYS 224 (254)
T ss_dssp EEES-SGGGHHHHHHSSEE
T ss_pred Eeec-ccccHhHHhhcCeE
Confidence 9999 99999999999874
No 91
>PLN02887 hydrolase family protein
Probab=99.76 E-value=2.6e-17 Score=195.36 Aligned_cols=198 Identities=14% Similarity=0.159 Sum_probs=126.4
Q ss_pred hhhhcccCCEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccCc
Q 002285 594 VDSYLQSNNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYNM 673 (942)
Q Consensus 594 ~~~y~~s~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l 673 (942)
++.|+. +.|+|++|+||||++. +..++++++++|++|.+ .|+.|+|+|||+...+..++..+++
T Consensus 301 ~~~~~~-~iKLIa~DLDGTLLn~--------------d~~Is~~t~eAI~kl~e-kGi~~vIATGR~~~~i~~~l~~L~l 364 (580)
T PLN02887 301 LRFYKP-KFSYIFCDMDGTLLNS--------------KSQISETNAKALKEALS-RGVKVVIATGKARPAVIDILKMVDL 364 (580)
T ss_pred hhhhcc-CccEEEEeCCCCCCCC--------------CCccCHHHHHHHHHHHH-CCCeEEEEcCCCHHHHHHHHHHhCc
Confidence 344444 6789999999999985 45799999999999997 6999999999999999988876632
Q ss_pred -----------eEEeecceEEEeCCCc--eeecccCCCChhHHHHHHHHHHHHHhcCCCeeeeeecceEE---------E
Q 002285 674 -----------WLAAENGMFLRLTTGE--WMTTMPENLNMDWVDSVKHVFEYFTERTPRSHFEVRETSLV---------W 731 (942)
Q Consensus 674 -----------~liaehG~~ir~~~~~--w~~~~~~~~~~~w~~~v~~il~~~~~r~~Gs~iE~K~~sl~---------~ 731 (942)
++|+.||+.+...++. +... .+ .+.+.++++...+..-...+...+..+. +
T Consensus 365 ~~~~~~I~~~~p~I~~NGA~I~d~~g~~I~~~~----L~---~e~v~eIi~~~~~~~i~~~~~~~d~~y~~~~~~~~~~~ 437 (580)
T PLN02887 365 AGKDGIISESSPGVFLQGLLVYGRQGREIYRSN----LD---QEVCREACLYSLEHKIPLIAFSQDRCLTLFDHPLVDSL 437 (580)
T ss_pred ccccceEeecccEEeecCeEEEECCCcEEEEEe----CC---HHHHHHHHHHHHHcCCeEEEEECCeEEEecCchHHHHH
Confidence 3567799999843332 2222 22 3445555554322111111111110000 0
Q ss_pred EE--ec-----c-ch-HHh--------------HHHHHHHHHHHhcCCCCCCCeEE-EEcCcEEEEEECCCCHHHHHHHH
Q 002285 732 NY--KY-----A-DL-EFG--------------RLQARDILQHLWSGPISNASVDV-VQGGRSVEVRAVGVTKGAAIDRI 787 (942)
Q Consensus 732 hy--r~-----a-d~-e~~--------------~~qa~el~~~L~~~~~~~~~v~v-~~G~~~vEV~p~gvnKG~Av~~L 787 (942)
++ .. . +. ++. .....++...+ ...+. ..+.+ ..+..++||.|+|+|||.||+.|
T Consensus 438 ~~~~~~~~~~~i~~l~~~~~~~~i~Ki~~~~~~e~~~~~l~~~l-~~~~~-~~~~v~~S~~~~lEI~p~gvSKG~ALk~L 515 (580)
T PLN02887 438 HTIYHEPKAEIMSSVDQLLAAADIQKVIFLDTAEGVSSVLRPYW-SEATG-DRANVVQAQPDMLEIVPPGTSKGNGVKML 515 (580)
T ss_pred HHhhccccccccCCHHHhhcccCeeEEEEEcChHHHHHHHHHHH-HHHhc-CcEEEEEecCcEEEEecCCCCHHHHHHHH
Confidence 00 00 0 00 000 00011122222 21111 13444 34677999999999999999999
Q ss_pred HHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCc
Q 002285 788 LGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 788 l~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
++++| ++.+.+++||| +.||.+||++++.
T Consensus 516 ~e~lG------I~~eeviAFGD-s~NDIeMLe~AG~ 544 (580)
T PLN02887 516 LNHLG------VSPDEIMAIGD-GENDIEMLQLASL 544 (580)
T ss_pred HHHcC------CCHHHEEEEec-chhhHHHHHHCCC
Confidence 99998 67899999999 9999999999965
No 92
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=99.76 E-value=1.3e-16 Score=179.09 Aligned_cols=197 Identities=23% Similarity=0.312 Sum_probs=145.3
Q ss_pred eeEEEEeeCccCccccchhcCChhhHHHHHHHHHHh---cCCceEEEeecccc--cCCHHHHHHHHHHhHHh-CCCCCCc
Q 002285 336 LTRVAAFPIGIDSDRFVRALELPQVQDHINELKERF---AGRKVMLGVDRLDM--IKGIPQKILAFEKFLEE-NPSWRDK 409 (942)
Q Consensus 336 ~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIl~VgRLd~--~KGi~~lL~Af~~ll~~-~P~~~~~ 409 (942)
..++.++|+|||.+.|.+... ...++.+ .++++++++++... .||+..+++|++.+.++ .|+
T Consensus 158 ~~~~~vi~ngi~~~~~~~~~~--------~~~~~~~~~~~~~~~i~~~~~~~~~~~K~~~~ll~a~~~l~~~~~~~---- 225 (365)
T cd03825 158 GIPIEVIPNGIDTTIFRPRDK--------REARKRLGLPADKKIILFGAVGGTDPRKGFDELIEALKRLAERWKDD---- 225 (365)
T ss_pred CCceEEeCCCCcccccCCCcH--------HHHHHHhCCCCCCeEEEEEecCCCccccCHHHHHHHHHHhhhccCCC----
Confidence 357889999999988754311 1123333 34566666667654 89999999999988765 444
Q ss_pred EEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCC-HHHHHHHHHHccEEEECCCCCCCChhHH
Q 002285 410 VVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLD-FHALCALYAITDVALVTSLRDGMNLVSY 488 (942)
Q Consensus 410 vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~-~~el~aly~~ADv~v~pSl~EG~~Lv~l 488 (942)
+.++.+| +++.... . .++ ..|. +.+.++ .+++..+|+.||++++||..||||++++
T Consensus 226 ~~~~i~G-----~~~~~~~------~---~~~--------~~v~-~~g~~~~~~~~~~~~~~ad~~l~ps~~e~~g~~~~ 282 (365)
T cd03825 226 IELVVFG-----ASDPEIP------P---DLP--------FPVH-YLGSLNDDESLALIYSAADVFVVPSLQENFPNTAI 282 (365)
T ss_pred eEEEEeC-----CCchhhh------c---cCC--------CceE-ecCCcCCHHHHHHHHHhCCEEEeccccccccHHHH
Confidence 5566553 3321100 0 111 1244 456677 8899999999999999999999999999
Q ss_pred HHHhhccCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHH-HhcCHHHHHHH
Q 002285 489 EFVACQASKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVASSIGYALNMPADEREKRHLHNFMHV-TTHTSQEWAAT 565 (942)
Q Consensus 489 EamA~~~~~~G~lIlSe~~G~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~ 565 (942)
|||+| +.|+|+|+.+|..+.+ +.+|+++++.|.++++++|.++++.+ +++.++.+++++++ ..++++.+++.
T Consensus 283 Eam~~----g~PvI~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~l~~l~~~~-~~~~~~~~~~~~~~~~~~s~~~~~~~ 357 (365)
T cd03825 283 EALAC----GTPVVAFDVGGIPDIVDHGVTGYLAKPGDPEDLAEGIEWLLADP-DEREELGEAARELAENEFDSRVQAKR 357 (365)
T ss_pred HHHhc----CCCEEEecCCCChhheeCCCceEEeCCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 99999 3578999988888877 45799999999999999999999754 45666667777777 56899999998
Q ss_pred HHHHHHH
Q 002285 566 FVSELND 572 (942)
Q Consensus 566 fl~~L~~ 572 (942)
+++-+++
T Consensus 358 ~~~~y~~ 364 (365)
T cd03825 358 YLSLYEE 364 (365)
T ss_pred HHHHHhh
Confidence 8876543
No 93
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=99.76 E-value=4.4e-17 Score=177.87 Aligned_cols=191 Identities=17% Similarity=0.236 Sum_probs=122.8
Q ss_pred CEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccC--ceEEeec
Q 002285 602 NRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYN--MWLAAEN 679 (942)
Q Consensus 602 ~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~--l~liaeh 679 (942)
.|+|++|+||||++. +..++++++++|++|.+ .|+.|+|+|||+...+...+..++ .++|+.|
T Consensus 3 ~kli~~DlDGTLl~~--------------~~~i~~~~~~ai~~~~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~N 67 (272)
T PRK10530 3 YRVIALDLDGTLLTP--------------KKTILPESLEALARARE-AGYKVIIVTGRHHVAIHPFYQALALDTPAICCN 67 (272)
T ss_pred ccEEEEeCCCceECC--------------CCccCHHHHHHHHHHHH-CCCEEEEEcCCChHHHHHHHHhcCCCCCEEEcC
Confidence 589999999999975 44689999999999997 699999999999999999888874 4699999
Q ss_pred ceEEEe-CCCceeecccCCCChhHHHHHHHHHHHHHhcCCCeeeeeecceE------------EE----------EEecc
Q 002285 680 GMFLRL-TTGEWMTTMPENLNMDWVDSVKHVFEYFTERTPRSHFEVRETSL------------VW----------NYKYA 736 (942)
Q Consensus 680 G~~ir~-~~~~w~~~~~~~~~~~w~~~v~~il~~~~~r~~Gs~iE~K~~sl------------~~----------hyr~a 736 (942)
|+.+.. .++.. +.....+ .+.+.++++...+..-...+...+..+ .| .+...
T Consensus 68 Ga~i~d~~~~~~--l~~~~l~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (272)
T PRK10530 68 GTYLYDYQAKKV--LEADPLP---VQQALQVIEMLDEHQIHGLMYVDDAMLYEHPTGHVIRTLNWAQTLPPEQRPTFTQV 142 (272)
T ss_pred CcEEEecCCCEE--EEecCCC---HHHHHHHHHHHHhCCcEEEEEcCCceEecCchHHHHHHhhhhhccchhcccceEEc
Confidence 999984 23321 1101122 344555555443221111111000000 00 00000
Q ss_pred ch--HH----h-----------HHHHHHHHHHHhcCCCCCCCeEE-EEcCcEEEEEECCCCHHHHHHHHHHHhcccCCCC
Q 002285 737 DL--EF----G-----------RLQARDILQHLWSGPISNASVDV-VQGGRSVEVRAVGVTKGAAIDRILGEIVRHKGLK 798 (942)
Q Consensus 737 d~--e~----~-----------~~qa~el~~~L~~~~~~~~~v~v-~~G~~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~ 798 (942)
+. +. . .....++.+.+ ....++.+ ..+..++|+.+++++||.|++++++.++
T Consensus 143 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~----~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~~g------ 212 (272)
T PRK10530 143 DSLAQAARQVNAIWKFALTHEDLPQLQHFAKHV----EHELGLECEWSWHDQVDIARKGNSKGKRLTQWVEAQG------ 212 (272)
T ss_pred ccHHHHHhhcCCcEEEEEecCCHHHHHHHHHHH----hhhcCceEEEecCceEEEecCCCChHHHHHHHHHHcC------
Confidence 00 00 0 00011222222 11123333 2345689999999999999999999998
Q ss_pred CCCceEEEEeCCCCCCHHHHHhcCc
Q 002285 799 TPIDYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 799 ~~~d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
++.+.+++||| +.||.+||+.++.
T Consensus 213 i~~~e~i~~GD-~~NDi~m~~~ag~ 236 (272)
T PRK10530 213 WSMKNVVAFGD-NFNDISMLEAAGL 236 (272)
T ss_pred CCHHHeEEeCC-ChhhHHHHHhcCc
Confidence 56899999999 9999999999864
No 94
>PLN02275 transferase, transferring glycosyl groups
Probab=99.76 E-value=1e-16 Score=183.24 Aligned_cols=240 Identities=13% Similarity=0.014 Sum_probs=156.6
Q ss_pred CCCCEEEEcCCchhh--HHHHHHhhCCCCeEEEEeccCCCChhHhhc--C--Cc----hHHHHHHh-hhccEEeecCHHH
Q 002285 241 EEGDVVWCHDYHLMF--LPQCLKEYNNNMKVGWFLHTPFPSSEIHRT--L--PS----RTELLRSV-LAADLVGFHTYDY 309 (942)
Q Consensus 241 ~~~DiIwvHDyhL~l--lp~~Lr~~~p~~~I~~flH~PfP~~e~fr~--l--p~----r~~il~~l-l~aDlIgF~t~~~ 309 (942)
.++|+||+|..+.+. ++..+-.+..+.++.+.+|..+. ..+.. . +. ...+.+.+ ..+|.|...+...
T Consensus 99 ~~~DvV~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~--~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~ii~~S~~~ 176 (371)
T PLN02275 99 PRPDVFLVQNPPSVPTLAVVKLACWLRRAKFVIDWHNFGY--TLLALSLGRSHPLVRLYRWYERHYGKMADGHLCVTKAM 176 (371)
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHHHHhCCCEEEEcCCccH--HHHhcccCCCCHHHHHHHHHHHHHHhhCCEEEECCHHH
Confidence 477999999876532 23333333346788888887531 11100 0 00 01112222 2367777766554
Q ss_pred HHHHHHHHHHHhccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHhcCCceEEEeecccccCCH
Q 002285 310 ARHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERFAGRKVMLGVDRLDMIKGI 389 (942)
Q Consensus 310 ~~~Fl~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi 389 (942)
.+...+ ..|. ++.++|+|+ .+.|.+.... ..+ ..+...+|+++||+.+.||+
T Consensus 177 ~~~l~~----------------~~g~--~i~vi~n~~-~~~f~~~~~~-------~~~--~~~~~~~i~~~grl~~~k~~ 228 (371)
T PLN02275 177 QHELDQ----------------NWGI--RATVLYDQP-PEFFRPASLE-------IRL--RPNRPALVVSSTSWTPDEDF 228 (371)
T ss_pred HHHHHH----------------hcCC--CeEEECCCC-HHHcCcCCch-------hcc--cCCCcEEEEEeCceeccCCH
Confidence 443321 0111 267889984 5667543211 011 11344678899999999999
Q ss_pred HHHHHHHHHhHH-----------------hCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccE
Q 002285 390 PQKILAFEKFLE-----------------ENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPI 452 (942)
Q Consensus 390 ~~lL~Af~~ll~-----------------~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV 452 (942)
..+++|+..+.. .+|+ +.|+++ |+|++.+++ ++++.+.+. ..+
T Consensus 229 ~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~----i~l~iv-----G~G~~~~~l----~~~~~~~~l-------~~v 288 (371)
T PLN02275 229 GILLEAAVMYDRRVAARLNESDSASGKQSLYPR----LLFIIT-----GKGPQKAMY----EEKISRLNL-------RHV 288 (371)
T ss_pred HHHHHHHHHHHhhhhhccccccccccccccCCC----eEEEEE-----eCCCCHHHH----HHHHHHcCC-------Cce
Confidence 999999988742 3465 446555 577764444 444444332 236
Q ss_pred EEeCCCCCHHHHHHHHHHccEEEECC--C-CCCCChhHHHHHhhccCCCceEEEeCCCCccccc--CCceEEECCCCHHH
Q 002285 453 HHLDRSLDFHALCALYAITDVALVTS--L-RDGMNLVSYEFVACQASKKGVLILSEFAGAAQSL--GAGAILVNPWNITE 527 (942)
Q Consensus 453 ~~l~~~v~~~el~aly~~ADv~v~pS--l-~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l--g~~gllVnP~D~~~ 527 (942)
+|+.+.++.+++..+|+.||++|+|+ . .||||++++||||| +.|+|+|..+|..+.+ |.+|++|+ |+++
T Consensus 289 ~~~~~~~~~~~~~~~l~~aDv~v~~~~s~~~e~~p~~llEAmA~----G~PVVa~~~gg~~eiv~~g~~G~lv~--~~~~ 362 (371)
T PLN02275 289 AFRTMWLEAEDYPLLLGSADLGVSLHTSSSGLDLPMKVVDMFGC----GLPVCAVSYSCIGELVKDGKNGLLFS--SSSE 362 (371)
T ss_pred EEEcCCCCHHHHHHHHHhCCEEEEeccccccccccHHHHHHHHC----CCCEEEecCCChHHHccCCCCeEEEC--CHHH
Confidence 77777889999999999999999863 2 48999999999999 3578899988888877 67899997 6999
Q ss_pred HHHHHHHHh
Q 002285 528 VASSIGYAL 536 (942)
Q Consensus 528 lA~aI~~aL 536 (942)
+|++|.++|
T Consensus 363 la~~i~~l~ 371 (371)
T PLN02275 363 LADQLLELL 371 (371)
T ss_pred HHHHHHHhC
Confidence 999998875
No 95
>PTZ00174 phosphomannomutase; Provisional
Probab=99.75 E-value=5.8e-17 Score=175.10 Aligned_cols=198 Identities=17% Similarity=0.227 Sum_probs=122.7
Q ss_pred cCCEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhccc---C-ceE
Q 002285 600 SNNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEY---N-MWL 675 (942)
Q Consensus 600 s~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~---~-l~l 675 (942)
.+.|||++|+||||++. +..++++++++|++|.+ .|+.|+|+|||+...+.+.++.. . .++
T Consensus 3 ~~~klia~DlDGTLL~~--------------~~~is~~~~~ai~~l~~-~Gi~~viaTGR~~~~i~~~l~~~~~~~~~~~ 67 (247)
T PTZ00174 3 MKKTILLFDVDGTLTKP--------------RNPITQEMKDTLAKLKS-KGFKIGVVGGSDYPKIKEQLGEDVLEDFDYV 67 (247)
T ss_pred CCCeEEEEECcCCCcCC--------------CCCCCHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHhhhhhcccCeE
Confidence 45799999999999986 45789999999999987 69999999999999999888743 2 367
Q ss_pred EeecceEEEeCCCce-eecccCCCChhHHHHHHHHHHHHH-----hcCCCeeeeeecceEEEEEe--ccch----HHh--
Q 002285 676 AAENGMFLRLTTGEW-MTTMPENLNMDWVDSVKHVFEYFT-----ERTPRSHFEVRETSLVWNYK--YADL----EFG-- 741 (942)
Q Consensus 676 iaehG~~ir~~~~~w-~~~~~~~~~~~w~~~v~~il~~~~-----~r~~Gs~iE~K~~sl~~hyr--~ad~----e~~-- 741 (942)
|+.||+.++..++.+ ...++...+.++...+.+.++.+. ....+.+++.......+.+. .... ++.
T Consensus 68 I~~NGa~I~~~~~~i~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (247)
T PTZ00174 68 FSENGLVAYKDGELFHSQSILKFLGEEKLKKFINFCLRYIADLDIPVKRGTFIEYRNGMINISPIGRNCSQEERDEFEKY 147 (247)
T ss_pred EeCCceEEEECCeEEEEEcchhcCCHHHHHHHHHHHHHHHHhcCCccceeeeEEcCCceEEeccccccCCHHHHHHHHhc
Confidence 999999998644332 221111123333344444433220 01122333322111111110 0000 000
Q ss_pred ---HHHHHHHHHHHhcCCCCCCCeEEEE-cCcEEEEEECCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCC---CCCC
Q 002285 742 ---RLQARDILQHLWSGPISNASVDVVQ-GGRSVEVRAVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHF---LQKD 814 (942)
Q Consensus 742 ---~~qa~el~~~L~~~~~~~~~v~v~~-G~~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~---d~nD 814 (942)
.....++.+.+ ...+....+.... |..++||.|+|+|||.||+.|+++ .+.+++|||. +.||
T Consensus 148 ~~~~~~~~~~~~~l-~~~~~~~~~~~s~~~~~~leI~~~gvsKg~al~~L~~~----------~~eviafGD~~~~~~ND 216 (247)
T PTZ00174 148 DKEHHIREKFIQDL-KKEFSDLGLKFSIGGQISFDVFPKGWDKTYCLRHLEND----------FKEIHFFGDKTFEGGND 216 (247)
T ss_pred CCcchHHHHHHHHH-HHhcCCCCeEEEecCceEEEeeeCCCcHHHHHHHHHhh----------hhhEEEEcccCCCCCCc
Confidence 00112333444 2222222333343 357999999999999999999987 3679999992 3799
Q ss_pred HHHHHhcCc
Q 002285 815 EDIYTFFEP 823 (942)
Q Consensus 815 EdMF~~~~~ 823 (942)
.+||++++.
T Consensus 217 ieMl~~~~~ 225 (247)
T PTZ00174 217 YEIYNDPRT 225 (247)
T ss_pred HhhhhcCCC
Confidence 999997644
No 96
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=99.74 E-value=2e-17 Score=178.81 Aligned_cols=191 Identities=16% Similarity=0.233 Sum_probs=128.8
Q ss_pred CEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccC----ceEEe
Q 002285 602 NRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYN----MWLAA 677 (942)
Q Consensus 602 ~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~----l~lia 677 (942)
+.+|++|+||||++..+ .+..++|++.++|+++.+ .|+.++++|||+...+.++...++ -.+|+
T Consensus 1 ~~li~tDlDGTLl~~~~-----------~~~~~~~~~~~~i~~~~~-~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~ 68 (249)
T TIGR01485 1 RLLLVSDLDNTLVDHTD-----------GDNQALLRLNALLEDHRG-EDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVT 68 (249)
T ss_pred CeEEEEcCCCcCcCCCC-----------CChHHHHHHHHHHHHhhc-cCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEE
Confidence 46899999999998421 134578999999999986 688999999999999998865442 24899
Q ss_pred ecceEEEeCCC-----ceeecccCCCChhHH-HHHHHHHHHHHhcCCCeeeeeecceEEEEEeccchHHhHHHHHHHHHH
Q 002285 678 ENGMFLRLTTG-----EWMTTMPENLNMDWV-DSVKHVFEYFTERTPRSHFEVRETSLVWNYKYADLEFGRLQARDILQH 751 (942)
Q Consensus 678 ehG~~ir~~~~-----~w~~~~~~~~~~~w~-~~v~~il~~~~~r~~Gs~iE~K~~sl~~hyr~ad~e~~~~qa~el~~~ 751 (942)
+||+.+..++. .|.... ...|. +.+..+...+...++....+.+...+.+.+.... ......++.+.
T Consensus 69 ~NGa~I~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~---~~~~~~~l~~~ 141 (249)
T TIGR01485 69 SVGSEIYYGGAEVPDQHWAEYL----SEKWQRDIVVAITDKFEELKPQPDLEQRPHKVSFFLDPEA---APEVIKQLTEM 141 (249)
T ss_pred cCCceEEeCCCCcCCHHHHHHH----hcccCHHHHHHHHhcCcccccCCccccCCeeEEEEechhh---hhHHHHHHHHH
Confidence 99999985431 122111 12233 2344444433333444444455566666653211 11112223333
Q ss_pred HhcCCCCCCCeEE-EEcCcEEEEEECCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhc
Q 002285 752 LWSGPISNASVDV-VQGGRSVEVRAVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFF 821 (942)
Q Consensus 752 L~~~~~~~~~v~v-~~G~~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~ 821 (942)
+ ... ...+.+ ..+..++||.|++++||.|++++++.++ ++.+.+++||| +.||.+||+.+
T Consensus 142 l-~~~--~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~~~------i~~~~~i~~GD-~~ND~~ml~~~ 202 (249)
T TIGR01485 142 L-KET--GLDVKLIYSSGKDLDILPQGSGKGQALQYLLQKLA------MEPSQTLVCGD-SGNDIELFEIG 202 (249)
T ss_pred H-Hhc--CCCEEEEEECCceEEEEeCCCChHHHHHHHHHHcC------CCccCEEEEEC-ChhHHHHHHcc
Confidence 3 221 123443 5678899999999999999999999988 56899999999 99999999984
No 97
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=99.73 E-value=3.7e-17 Score=175.32 Aligned_cols=184 Identities=16% Similarity=0.188 Sum_probs=124.3
Q ss_pred EEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccCc----eEEeec
Q 002285 604 LLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYNM----WLAAEN 679 (942)
Q Consensus 604 Li~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l----~liaeh 679 (942)
||++|+||||++. +..+++.. ++|+ +. +.|+.++|+|||++..+.+++..+++ ++|++|
T Consensus 1 li~~DlDgTLl~~--------------~~~~~~~~-~~~~-~~-~~gi~~viaTGR~~~~v~~~~~~l~l~~~~~~I~~n 63 (236)
T TIGR02471 1 LIITDLDNTLLGD--------------DEGLASFV-ELLR-GS-GDAVGFGIATGRSVESAKSRYAKLNLPSPDVLIARV 63 (236)
T ss_pred CeEEeccccccCC--------------HHHHHHHH-HHHH-hc-CCCceEEEEeCCCHHHHHHHHHhCCCCCCCEEEECC
Confidence 5899999999974 22455555 7776 44 46999999999999999999988743 399999
Q ss_pred ceEEEeCCCceeecccCCCChhHHHHH-----HHHHHHHHhcCCCeeeeeecc--eEEEEEeccchHHhHHHHHHHHHHH
Q 002285 680 GMFLRLTTGEWMTTMPENLNMDWVDSV-----KHVFEYFTERTPRSHFEVRET--SLVWNYKYADLEFGRLQARDILQHL 752 (942)
Q Consensus 680 G~~ir~~~~~w~~~~~~~~~~~w~~~v-----~~il~~~~~r~~Gs~iE~K~~--sl~~hyr~ad~e~~~~qa~el~~~L 752 (942)
|+.+..... +. .+..|...+ ...+..+....+|..++.+.. .+.++|+..+ +.. ....++.+.+
T Consensus 64 Ga~i~~~~~-~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~-~~~~~~~~~l 134 (236)
T TIGR02471 64 GTEIYYGPE-LQ------PDRFWQKHIDHDWRRQAVVEALADIPGLTLQDDQEQGPFKISYLLDP-EGE-PILPQIRQRL 134 (236)
T ss_pred CceEEeCCC-CC------CChhHHHHHhcCCCHHHHHHHHhcCCCcEeCChhcCCCeeEEEEECc-ccc-hHHHHHHHHH
Confidence 999864321 10 011121111 111234445577777776652 4677887532 211 1122333333
Q ss_pred hcCCCCCCCeEE-EEcCcEEEEEECCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCc
Q 002285 753 WSGPISNASVDV-VQGGRSVEVRAVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 753 ~~~~~~~~~v~v-~~G~~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
.... ..+.+ ..+..++|+.|+++|||.|++.|+++++ ++.+.+++||| +.||++||+.++.
T Consensus 135 -~~~~--~~~~~~~~~~~~~ei~~~~~~K~~al~~l~~~~g------~~~~~~i~~GD-~~nD~~ml~~~~~ 196 (236)
T TIGR02471 135 -RQQS--QAAKVILSCGWFLDVLPLRASKGLALRYLSYRWG------LPLEQILVAGD-SGNDEEMLRGLTL 196 (236)
T ss_pred -Hhcc--CCEEEEEECCceEEEeeCCCChHHHHHHHHHHhC------CCHHHEEEEcC-CccHHHHHcCCCc
Confidence 2211 23343 4566789999999999999999999998 56789999999 9999999998865
No 98
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=99.73 E-value=5.6e-17 Score=175.90 Aligned_cols=191 Identities=18% Similarity=0.288 Sum_probs=124.5
Q ss_pred EEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccC--ceEEeecce
Q 002285 604 LLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYN--MWLAAENGM 681 (942)
Q Consensus 604 Li~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~--l~liaehG~ 681 (942)
||++|+||||++. ...++++++++|++|.+ .|+.|+|+|||+...+.+.+..++ .++|+.||+
T Consensus 1 li~~DlDGTLl~~--------------~~~i~~~~~~~i~~l~~-~G~~~~iaTGR~~~~~~~~~~~~~~~~~~I~~NGa 65 (256)
T TIGR00099 1 LIFIDLDGTLLND--------------DHTISPSTKEALAKLRE-KGIKVVLATGRPYKEVKNILKELGLDTPFITANGA 65 (256)
T ss_pred CEEEeCCCCCCCC--------------CCccCHHHHHHHHHHHH-CCCeEEEEeCCCHHHHHHHHHHcCCCCCEEEcCCc
Confidence 5899999999985 34689999999999997 599999999999999999988874 479999999
Q ss_pred EEEeCCCceeecccCCCChhHHHHHHHHHHHHHhcCCCeeeeeecceEEEE-------------Eec----cchHH----
Q 002285 682 FLRLTTGEWMTTMPENLNMDWVDSVKHVFEYFTERTPRSHFEVRETSLVWN-------------YKY----ADLEF---- 740 (942)
Q Consensus 682 ~ir~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~r~~Gs~iE~K~~sl~~h-------------yr~----ad~e~---- 740 (942)
.+...+++. +.....+ .+.+.++++.+....-...+...+.....+ +.. .+.+.
T Consensus 66 ~i~~~~~~~--i~~~~i~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (256)
T TIGR00099 66 AVIDDQGEI--LYKKPLD---LDLVEEILNFLKKHGLDVILYGDDSIYASKNDPEYFTIFKKFLGEPKLEVVDIQYLPDD 140 (256)
T ss_pred EEECCCCCE--EeecCCC---HHHHHHHHHHHHHcCcEEEEEeCCeEEecCCCcchhHHHHHhccCCcceeccchhhhcc
Confidence 998543321 1111122 344555555443321111111111000000 000 00000
Q ss_pred ---------hHHHHHHHHHHHhcC-CCCCCCeEE-EEcCcEEEEEECCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeC
Q 002285 741 ---------GRLQARDILQHLWSG-PISNASVDV-VQGGRSVEVRAVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGH 809 (942)
Q Consensus 741 ---------~~~qa~el~~~L~~~-~~~~~~v~v-~~G~~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD 809 (942)
......++...+ .. .. ...+.+ ..+..++||.|+++|||.||+.+++.++ ++.+.+++|||
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~s~~~~leI~~~~~~K~~~i~~~~~~~~------~~~~~~~~~GD 212 (256)
T TIGR00099 141 ILKILLLFLDPEDLDLLIEAL-NKLEL-EENVSVVSSGPYSIEITAKGVSKGSALQSLAEALG------ISLEDVIAFGD 212 (256)
T ss_pred cceEEEEECCHHHHHHHHHHh-hhhhh-cCCEEEEEecCceEEecCCCCChHHHHHHHHHHcC------CCHHHEEEeCC
Confidence 001112233333 21 11 123554 4567899999999999999999999988 56899999999
Q ss_pred CCCCCHHHHHhcCc
Q 002285 810 FLQKDEDIYTFFEP 823 (942)
Q Consensus 810 ~d~nDEdMF~~~~~ 823 (942)
+.||.+||+.++.
T Consensus 213 -~~nD~~m~~~~~~ 225 (256)
T TIGR00099 213 -GMNDIEMLEAAGY 225 (256)
T ss_pred -cHHhHHHHHhCCc
Confidence 9999999999975
No 99
>PLN02423 phosphomannomutase
Probab=99.73 E-value=3.6e-16 Score=168.64 Aligned_cols=188 Identities=20% Similarity=0.267 Sum_probs=117.4
Q ss_pred CEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhccc-C---ceEEe
Q 002285 602 NRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEY-N---MWLAA 677 (942)
Q Consensus 602 ~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~-~---l~lia 677 (942)
++++|+|+||||++. +..++++++++|++|.+ . +.++++|||+...+.+.|+.. . .++|+
T Consensus 7 ~~i~~~D~DGTLl~~--------------~~~i~~~~~~ai~~l~~-~-i~fviaTGR~~~~~~~~~~~~~~~~~~~~I~ 70 (245)
T PLN02423 7 GVIALFDVDGTLTAP--------------RKEATPEMLEFMKELRK-V-VTVGVVGGSDLSKISEQLGKTVINDYDYVFS 70 (245)
T ss_pred ceEEEEeccCCCcCC--------------CCcCCHHHHHHHHHHHh-C-CEEEEECCcCHHHHHHHhcccccccCCEEEE
Confidence 456779999999975 45689999999999995 4 999999999999998888774 1 47899
Q ss_pred ecceEEEeCCCceeec--ccCCCChhHHHHHHHHHHHHHh---c-----CCCeeeeeecceEEEEE--eccchH----Hh
Q 002285 678 ENGMFLRLTTGEWMTT--MPENLNMDWVDSVKHVFEYFTE---R-----TPRSHFEVRETSLVWNY--KYADLE----FG 741 (942)
Q Consensus 678 ehG~~ir~~~~~w~~~--~~~~~~~~w~~~v~~il~~~~~---r-----~~Gs~iE~K~~sl~~hy--r~ad~e----~~ 741 (942)
+||+++...+ ++... .+...+. +.+.++++.... . ..+.+++..+..+.+.+ .+.... +.
T Consensus 71 ~NGa~i~~~g-~~i~~~~l~~~l~~---~~~~~ii~~~~~~~~~~~i~~~~~~~ie~~~~i~~~~~~~~~~~~~~~~~~~ 146 (245)
T PLN02423 71 ENGLVAHKDG-KLIGTQSLKSFLGE---DKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNVSPIGRNCSQEERDEFE 146 (245)
T ss_pred CCceEEEeCC-EEEEEecccccCCH---HHHHHHHHHHHHHHHHcCCccccCCeEEccCCccccCcccccCCHhHHhhHH
Confidence 9999998543 33221 1011222 334444433211 1 12344443322222221 111101 00
Q ss_pred H-----HHHHHHHHHHhcCCCCCCCeEEE-EcCcEEEEEECCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCC---CC
Q 002285 742 R-----LQARDILQHLWSGPISNASVDVV-QGGRSVEVRAVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHF---LQ 812 (942)
Q Consensus 742 ~-----~qa~el~~~L~~~~~~~~~v~v~-~G~~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~---d~ 812 (942)
. ....++.+.+ ...+....+.+. .|..++||.++|+|||.||+.|+ . .+.+++|||. +.
T Consensus 147 ~i~~i~~~~~~~~~~l-~~~~~~~~~~~s~~g~~~iDi~~~gvnKg~al~~L~---~--------~~e~~aFGD~~~~~~ 214 (245)
T PLN02423 147 KYDKVHNIRPKMVSVL-REKFAHLNLTYSIGGQISFDVFPQGWDKTYCLQFLE---D--------FDEIHFFGDKTYEGG 214 (245)
T ss_pred hhCccchHHHHHHHHH-HHhCCCCcEEEecCCcEEEEEeeCCCCHHHHHHHhc---C--------cCeEEEEeccCCCCC
Confidence 0 1112333334 222232234333 35689999999999999999998 2 6899999994 49
Q ss_pred CCHHHHHhc
Q 002285 813 KDEDIYTFF 821 (942)
Q Consensus 813 nDEdMF~~~ 821 (942)
||.+|++.-
T Consensus 215 ND~eMl~~~ 223 (245)
T PLN02423 215 NDHEIFESE 223 (245)
T ss_pred CcHHHHhCC
Confidence 999999764
No 100
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=99.73 E-value=8.6e-17 Score=169.93 Aligned_cols=182 Identities=15% Similarity=0.242 Sum_probs=119.5
Q ss_pred EEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccC--ceEEeecc
Q 002285 603 RLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYN--MWLAAENG 680 (942)
Q Consensus 603 rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~--l~liaehG 680 (942)
|+|++|+||||++. +..+++++.++|++|.+ +|+.|+|+|||+...+.+++..++ .++|++||
T Consensus 2 k~v~~DlDGTLl~~--------------~~~i~~~~~~~i~~l~~-~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NG 66 (215)
T TIGR01487 2 KLVAIDIDGTLTEP--------------NRMISERAIEAIRKAEK-KGIPVSLVTGNTVPFARALAVLIGTSGPVVAENG 66 (215)
T ss_pred cEEEEecCCCcCCC--------------CcccCHHHHHHHHHHHH-CCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccC
Confidence 69999999999975 45689999999999987 799999999999999999888774 47999999
Q ss_pred eEEEeCCCceeecccCCCChhHHHHHHHHHHHHHhcCCCeeeeeecceEEEEEeccchHHhHHHHHHHHHHHhcCCCCCC
Q 002285 681 MFLRLTTGEWMTTMPENLNMDWVDSVKHVFEYFTERTPRSHFEVRETSLVWNYKYADLEFGRLQARDILQHLWSGPISNA 760 (942)
Q Consensus 681 ~~ir~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~r~~Gs~iE~K~~sl~~hyr~ad~e~~~~qa~el~~~L~~~~~~~~ 760 (942)
+.+...++. ....+ ....|...-.... .+....-...+ ....+.++.. ... ...+...+ .. .
T Consensus 67 a~i~~~~~~-~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~--~~~-----~~~~~~~l-~~----~ 128 (215)
T TIGR01487 67 GVIFYNKED-IFLAN--MEEEWFLDEEKKK-RFPRDRLSNEY--PRASLVIMRE--GKD-----VDEVREII-KE----R 128 (215)
T ss_pred cEEEeCCCc-EEEec--ccchhhHHHhhhh-hhhhhhccccc--ceeEEEEecC--Ccc-----HHHHHHHH-Hh----C
Confidence 999864332 11111 1111111000000 00000000000 0111111111 111 11222223 21 2
Q ss_pred CeEEEEcCcEEEEEECCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCcC
Q 002285 761 SVDVVQGGRSVEVRAVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEPE 824 (942)
Q Consensus 761 ~v~v~~G~~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~~ 824 (942)
++.+..+...+||.|.+++||.|+++++++++ ++.+.+++||| +.||.+||+.++..
T Consensus 129 ~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~------i~~~~~i~iGD-s~ND~~ml~~ag~~ 185 (215)
T TIGR01487 129 GLNLVDSGFAIHIMKKGVDKGVGVEKLKELLG------IKPEEVAAIGD-SENDIDLFRVVGFK 185 (215)
T ss_pred CeEEEecCceEEEecCCCChHHHHHHHHHHhC------CCHHHEEEECC-CHHHHHHHHhCCCe
Confidence 45555566789999999999999999999998 56788999999 99999999999763
No 101
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=99.72 E-value=1.1e-16 Score=169.62 Aligned_cols=184 Identities=17% Similarity=0.128 Sum_probs=120.3
Q ss_pred EEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccC---ceEEeecc
Q 002285 604 LLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYN---MWLAAENG 680 (942)
Q Consensus 604 Li~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~---l~liaehG 680 (942)
+|++|+||||++. +..+++.++++|++|.+ .|+.|+|+|||+...+..++..++ .++||+||
T Consensus 1 ~i~~DlDGTLL~~--------------~~~~~~~~~~~l~~l~~-~gi~~~i~TgR~~~~~~~~~~~l~~~~~~~I~~NG 65 (221)
T TIGR02463 1 WVFSDLDGTLLDS--------------HSYDWQPAAPWLTRLQE-AGIPVILCTSKTAAEVEYLQKALGLTGDPYIAENG 65 (221)
T ss_pred CEEEeCCCCCcCC--------------CCCCcHHHHHHHHHHHH-CCCeEEEEcCCCHHHHHHHHHHcCCCCCcEEEeCC
Confidence 5899999999975 22345559999999987 699999999999999999998874 46999999
Q ss_pred eEEEeC-CCc-e---eecccCCCChhHHHHHHHHHHHHHhcCCC-eeeee-----------------------ecceEEE
Q 002285 681 MFLRLT-TGE-W---MTTMPENLNMDWVDSVKHVFEYFTERTPR-SHFEV-----------------------RETSLVW 731 (942)
Q Consensus 681 ~~ir~~-~~~-w---~~~~~~~~~~~w~~~v~~il~~~~~r~~G-s~iE~-----------------------K~~sl~~ 731 (942)
+.+... ... + .... ....| +.+.++++...+...- ..... +.....+
T Consensus 66 a~i~~~~~~~~~~~~~~~~---~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (221)
T TIGR02463 66 AAIHLEELWREEPGYPRII---LGISY-GIIRLVLETLSEELHFKFTPFDDLSDAEIAELTGLSGSQAALAQDREASVPL 141 (221)
T ss_pred cEEEcCcccccCCCceEEe---cCCCH-HHHHHHHHHHHHHhCCCceehhhCCHHHHHHHhCcCHHHHHHHHhccCCccE
Confidence 999853 111 1 0000 11122 3455555433221000 00000 0111111
Q ss_pred EEeccchHHhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEECCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCC
Q 002285 732 NYKYADLEFGRLQARDILQHLWSGPISNASVDVVQGGRSVEVRAVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFL 811 (942)
Q Consensus 732 hyr~ad~e~~~~qa~el~~~L~~~~~~~~~v~v~~G~~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d 811 (942)
... .+++ ...++.+.+ .. .++.+..+...+||.|++++||.|+++++++++ ++.+.+++||| .
T Consensus 142 ~~~-~~~~----~~~~~~~~l-~~----~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~lg------i~~~~vi~~GD-~ 204 (221)
T TIGR02463 142 LWR-DSDS----RMPRFTALL-AD----LGLAIVQGNRFSHVLGASSSKGKAANWLKATYN------QPDVKTLGLGD-G 204 (221)
T ss_pred Eec-Cchh----HHHHHHHHH-HH----cCCeEEecCCeeEEecCCCCHHHHHHHHHHHhC------CCCCcEEEECC-C
Confidence 110 1111 111222222 21 245666677889999999999999999999998 57899999999 9
Q ss_pred CCCHHHHHhcCc
Q 002285 812 QKDEDIYTFFEP 823 (942)
Q Consensus 812 ~nDEdMF~~~~~ 823 (942)
.||++||++++.
T Consensus 205 ~NDi~ml~~ag~ 216 (221)
T TIGR02463 205 PNDLPLLEVADY 216 (221)
T ss_pred HHHHHHHHhCCc
Confidence 999999999975
No 102
>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism]
Probab=99.72 E-value=1.5e-15 Score=176.42 Aligned_cols=285 Identities=22% Similarity=0.233 Sum_probs=194.8
Q ss_pred HHHHHHHHHHHHHHHHhhc--CCCCEEEEcCCchhhHHHHHHhh---CCCCeEEEEeccC-----CC-ChhHhhcCCch-
Q 002285 222 FDAYKRANQMFAKVVNNIY--EEGDVVWCHDYHLMFLPQCLKEY---NNNMKVGWFLHTP-----FP-SSEIHRTLPSR- 289 (942)
Q Consensus 222 w~~Y~~vN~~fa~~i~~~~--~~~DiIwvHDyhL~llp~~Lr~~---~p~~~I~~flH~P-----fP-~~e~fr~lp~r- 289 (942)
+..+..+.++-++.+-... -.+||||+||||+.++|.++++. ...++.+|+.|.- |+ .....-.||.-
T Consensus 108 ~~Rf~~F~~a~~~~~~~~~~~~~pDIvH~hDWqt~L~~~~lk~~~~~~~~i~tVfTIHNl~~qG~~~~~~~~~lgLp~~~ 187 (487)
T COG0297 108 AERFAFFSLAAAELAPLGLISWLPDIVHAHDWQTGLLPAYLKQRYRSGYIIPTVFTIHNLAYQGLFRLQYLEELGLPFEA 187 (487)
T ss_pred HHHHHHHHHHHHHHhhhcCCCCCCCEEEeecHHHHHHHHHHhhcccccccCCeEEEEeeceeecccchhhHHHhcCCHHH
Confidence 5555555555444332222 26899999999999999999997 6789999999953 23 11112233410
Q ss_pred ------------HHHHHHhhhccEEeecCHHHHHHHHHHHHHHhccccCCCceecCCeeeEEEEeeCccCccccchhcCC
Q 002285 290 ------------TELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALEL 357 (942)
Q Consensus 290 ------------~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~ 357 (942)
.-+-.++..||.|..-++.|+..... ...| +.....+.+ +..++.-|-||||.+...+....
T Consensus 188 ~~~~~l~~~~~~~~lK~gi~~ad~vttVSptYa~Ei~t---~~~g-~gl~g~l~~--~~~~l~GI~NgiD~~~wnp~~d~ 261 (487)
T COG0297 188 YASFGLEFYGQISFLKGGLYYADAVTTVSPTYAGEIYT---PEYG-EGLEGLLSW--RSGKLSGILNGIDYDLWNPETDP 261 (487)
T ss_pred hhhceeeecCcchhhhhhheeccEEEEECHHHHHhhcc---cccc-ccchhhhhh--ccccEEEEEeeEEecccCccccc
Confidence 12334556678777777777765441 0010 000011111 23567778899998877654321
Q ss_pred -----------hhhHHHHHHHHHHh--c---CCceEEEeecccccCCHHHHHHHHHHhHHhCCCCCCcEEEEEEEcCCCC
Q 002285 358 -----------PQVQDHINELKERF--A---GRKVMLGVDRLDMIKGIPQKILAFEKFLEENPSWRDKVVLIQIAVPTRT 421 (942)
Q Consensus 358 -----------~~~~~~~~~lr~~~--~---~~~iIl~VgRLd~~KGi~~lL~Af~~ll~~~P~~~~~vvLvqi~~psrg 421 (942)
+.-.+....+++.+ . +.+++..|+||+..||++.+++|+..++++. ++ ++++ |
T Consensus 262 ~~~~~y~~~~~~~k~~nk~~L~~~~gL~~~~~~pl~~~vsRl~~QKG~dl~~~~i~~~l~~~--~~--~vil--G----- 330 (487)
T COG0297 262 YIAANYSAEVLPAKAENKVALQERLGLDVDLPGPLFGFVSRLTAQKGLDLLLEAIDELLEQG--WQ--LVLL--G----- 330 (487)
T ss_pred chhccCCccchhhhHHHHHHHHHHhCCCCCCCCcEEEEeeccccccchhHHHHHHHHHHHhC--ce--EEEE--e-----
Confidence 00112223455555 2 5689999999999999999999999999986 43 5444 3
Q ss_pred ChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhccCCCceE
Q 002285 422 DVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVL 501 (942)
Q Consensus 422 d~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~l 501 (942)
.+ ...++..+..++.++.+++. +.-..+..-...+|..||++++||.+|++||+-++||.- +.++
T Consensus 331 ~g--d~~le~~~~~la~~~~~~~~---------~~i~~~~~la~~i~agaD~~lmPSrfEPcGL~ql~amry----Gtvp 395 (487)
T COG0297 331 TG--DPELEEALRALASRHPGRVL---------VVIGYDEPLAHLIYAGADVILMPSRFEPCGLTQLYAMRY----GTLP 395 (487)
T ss_pred cC--cHHHHHHHHHHHHhcCceEE---------EEeeecHHHHHHHHhcCCEEEeCCcCcCCcHHHHHHHHc----CCcc
Confidence 33 13577888888888765432 223345667778999999999999999999999999998 3579
Q ss_pred EEeCCCCccccc-C---------CceEEECCCCHHHHHHHHHHHhCC
Q 002285 502 ILSEFAGAAQSL-G---------AGAILVNPWNITEVASSIGYALNM 538 (942)
Q Consensus 502 IlSe~~G~~~~l-g---------~~gllVnP~D~~~lA~aI~~aL~m 538 (942)
|+.+.+|.++.+ . .+|+++.|.+.++++.+|.+++..
T Consensus 396 Iv~~tGGLadTV~~~~~~~~~~~gtGf~f~~~~~~~l~~al~rA~~~ 442 (487)
T COG0297 396 IVRETGGLADTVVDRNEWLIQGVGTGFLFLQTNPDHLANALRRALVL 442 (487)
T ss_pred eEcccCCccceecCccchhccCceeEEEEecCCHHHHHHHHHHHHHH
Confidence 999999999988 2 479999999999999999999864
No 103
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=99.72 E-value=1.8e-16 Score=172.17 Aligned_cols=182 Identities=18% Similarity=0.135 Sum_probs=122.0
Q ss_pred EEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccC--ceEEeecce
Q 002285 604 LLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYN--MWLAAENGM 681 (942)
Q Consensus 604 Li~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~--l~liaehG~ 681 (942)
||++|+||||++. .....+.++++|++|.+ .|+.|+|+|||+...+.+++..++ .++|++||+
T Consensus 1 li~~DlDGTll~~--------------~~~~~~~~~~~i~~l~~-~g~~~~~~TgR~~~~~~~~~~~~~~~~~~I~~NGa 65 (256)
T TIGR01486 1 WIFTDLDGTLLDP--------------HGYDWGPAKEVLERLQE-LGIPVIPCTSKTAAEVEYLRKELGLEDPFIVENGG 65 (256)
T ss_pred CEEEcCCCCCcCC--------------CCcCchHHHHHHHHHHH-CCCeEEEEcCCCHHHHHHHHHHcCCCCcEEEcCCe
Confidence 5899999999976 22133468999999987 699999999999999999998885 479999999
Q ss_pred EEEeCCCc------eeecccCCCChhHHHHHHHHHHHHHhcCCCeeee-ee-----------------------cceEEE
Q 002285 682 FLRLTTGE------WMTTMPENLNMDWVDSVKHVFEYFTERTPRSHFE-VR-----------------------ETSLVW 731 (942)
Q Consensus 682 ~ir~~~~~------w~~~~~~~~~~~w~~~v~~il~~~~~r~~Gs~iE-~K-----------------------~~sl~~ 731 (942)
++...++. |... . ... .+.+.++++.+..+.+..+.. .. .....+
T Consensus 66 ~i~~~~~~~~~~~~~~~~--~--~i~-~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (256)
T TIGR01486 66 AIYGPRGWFTEPEYPVIA--L--GIP-YEKIRARLEELSEELGFKFRGLGDLTDAEIAELTGLSRELAALAQRREYSETI 140 (256)
T ss_pred EEEeCCCcccCCCeEEEE--c--CCC-HHHHHHHHHHHHHHhCCCccchhhCCHHHHHHHhCcCHHHHHHHhhCccCCce
Confidence 99854332 1111 1 122 255666666543322111100 00 000000
Q ss_pred EEeccchHHhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEECCCCHHHHHHHHHHHhcccCCCCCC--CceEEEEeC
Q 002285 732 NYKYADLEFGRLQARDILQHLWSGPISNASVDVVQGGRSVEVRAVGVTKGAAIDRILGEIVRHKGLKTP--IDYVLCIGH 809 (942)
Q Consensus 732 hyr~ad~e~~~~qa~el~~~L~~~~~~~~~v~v~~G~~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~--~d~vl~iGD 809 (942)
.+ +++ ....+.+.+ . ...+.+..+..++||.|++++||.|+++++++++ ++ .+.+++|||
T Consensus 141 ~~---~~~----~~~~~~~~~-~----~~~~~~~~s~~~~ei~~~~~~Kg~ai~~l~~~~~------i~~~~~~~~a~GD 202 (256)
T TIGR01486 141 LW---SEE----RRERFTEAL-V----ELGLEVTHGNRFYHVLGAGSDKGKAANALKQFYN------QPGGAIKVVGLGD 202 (256)
T ss_pred ec---ChH----HHHHHHHHH-H----HcCCEEEeCCceEEEecCCCCHHHHHHHHHHHHh------hcCCCceEEEEcC
Confidence 00 111 111222222 1 1245666666799999999999999999999998 56 789999999
Q ss_pred CCCCCHHHHHhcCcC
Q 002285 810 FLQKDEDIYTFFEPE 824 (942)
Q Consensus 810 ~d~nDEdMF~~~~~~ 824 (942)
+.||++||+.++..
T Consensus 203 -~~ND~~Ml~~ag~~ 216 (256)
T TIGR01486 203 -SPNDLPLLEVVDLA 216 (256)
T ss_pred -CHhhHHHHHHCCEE
Confidence 99999999999863
No 104
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=99.68 E-value=1.5e-14 Score=168.35 Aligned_cols=279 Identities=18% Similarity=0.149 Sum_probs=170.9
Q ss_pred CCCEEEEcCCchhhHHHHHHh-hCCCCeEEEEeccCCC-ChhHhhcCCchHHHHHHhh-hccEEeecCHHHHHHHHHHHH
Q 002285 242 EGDVVWCHDYHLMFLPQCLKE-YNNNMKVGWFLHTPFP-SSEIHRTLPSRTELLRSVL-AADLVGFHTYDYARHFVSACT 318 (942)
Q Consensus 242 ~~DiIwvHDyhL~llp~~Lr~-~~p~~~I~~flH~PfP-~~e~fr~lp~r~~il~~ll-~aDlIgF~t~~~~~~Fl~~~~ 318 (942)
.+|+|++|.+.++ |.++.. +..++++.+..|.-.. +...++.+ ..+.+.++ .+|.|..++....+.+.+
T Consensus 124 ~Pd~v~~~~~~~~--~~~l~~~~~~~ip~vl~~~~~~~~s~~~~~~~---~~~~r~~~~~~d~ii~~S~~~~~~l~~--- 195 (425)
T PRK05749 124 RPKLVIIMETELW--PNLIAELKRRGIPLVLANARLSERSFKRYQKF---KRFYRLLFKNIDLVLAQSEEDAERFLA--- 195 (425)
T ss_pred CCCEEEEEecchh--HHHHHHHHHCCCCEEEEeccCChhhHHHHHHH---HHHHHHHHHhCCEEEECCHHHHHHHHH---
Confidence 4699999987765 444422 2235666655443221 22222222 22333333 479998888887776643
Q ss_pred HHhccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHh-cCCceEEEeecccccCCHHHHHHHHH
Q 002285 319 RILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERF-AGRKVMLGVDRLDMIKGIPQKILAFE 397 (942)
Q Consensus 319 r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~-~~~~iIl~VgRLd~~KGi~~lL~Af~ 397 (942)
+|. ... +.++|++ +.+.+.... .......+++.+ +++++|+++++. .|+...+|+||.
T Consensus 196 --~g~-----------~~~-i~vi~n~-~~d~~~~~~----~~~~~~~~r~~~~~~~~vil~~~~~--~~~~~~ll~A~~ 254 (425)
T PRK05749 196 --LGA-----------KNE-VTVTGNL-KFDIEVPPE----LAARAATLRRQLAPNRPVWIAASTH--EGEEELVLDAHR 254 (425)
T ss_pred --cCC-----------CCC-cEecccc-cccCCCChh----hHHHHHHHHHHhcCCCcEEEEeCCC--chHHHHHHHHHH
Confidence 221 123 5667763 333222111 112234566666 677888998874 688999999999
Q ss_pred HhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCC-cC------cccEEEeCCCCCHHHHHHHHHH
Q 002285 398 KFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGT-LT------TVPIHHLDRSLDFHALCALYAI 470 (942)
Q Consensus 398 ~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~-~~------~~pV~~l~~~v~~~el~aly~~ 470 (942)
++.+++|+++ |+++ |++++. .+++++++.+.+..... .+ -..|. +.+ ...++..+|+.
T Consensus 255 ~l~~~~~~~~----liiv-----G~g~~r---~~~l~~~~~~~gl~~~~~~~~~~~~~~~~v~-l~~--~~~el~~~y~~ 319 (425)
T PRK05749 255 ALLKQFPNLL----LILV-----PRHPER---FKEVEELLKKAGLSYVRRSQGEPPSADTDVL-LGD--TMGELGLLYAI 319 (425)
T ss_pred HHHHhCCCcE----EEEc-----CCChhh---HHHHHHHHHhCCCcEEEccCCCCCCCCCcEE-EEe--cHHHHHHHHHh
Confidence 9988888864 4433 566653 12344444443221100 00 01232 222 35799999999
Q ss_pred ccEEEE-CCCCCCCChhHHHHHhhccCCCceEEEeCCCCccccc----CCceEEECCCCHHHHHHHHHHHhCCCHHHHHH
Q 002285 471 TDVALV-TSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSL----GAGAILVNPWNITEVASSIGYALNMPADEREK 545 (942)
Q Consensus 471 ADv~v~-pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l----g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~ 545 (942)
||++++ +|+.||+|++++||||| +.|+|++...|....+ ..+|+++.|.|.+++|++|.+++++ ++.+.+
T Consensus 320 aDi~~v~~S~~e~~g~~~lEAma~----G~PVI~g~~~~~~~e~~~~~~~~g~~~~~~d~~~La~~l~~ll~~-~~~~~~ 394 (425)
T PRK05749 320 ADIAFVGGSLVKRGGHNPLEPAAF----GVPVISGPHTFNFKEIFERLLQAGAAIQVEDAEDLAKAVTYLLTD-PDARQA 394 (425)
T ss_pred CCEEEECCCcCCCCCCCHHHHHHh----CCCEEECCCccCHHHHHHHHHHCCCeEEECCHHHHHHHHHHHhcC-HHHHHH
Confidence 999665 68889999999999999 3567776654433222 3568888899999999999999975 557777
Q ss_pred HHHHHhHHHHhcCHHHHHHHHHHHHH
Q 002285 546 RHLHNFMHVTTHTSQEWAATFVSELN 571 (942)
Q Consensus 546 r~~~~~~~v~~~~~~~W~~~fl~~L~ 571 (942)
+.+++++++.++. .-.++.++.+.
T Consensus 395 m~~~a~~~~~~~~--~~~~~~~~~l~ 418 (425)
T PRK05749 395 YGEAGVAFLKQNQ--GALQRTLQLLE 418 (425)
T ss_pred HHHHHHHHHHhCc--cHHHHHHHHHH
Confidence 8888888887652 33344444443
No 105
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=99.68 E-value=4.4e-16 Score=157.52 Aligned_cols=156 Identities=29% Similarity=0.412 Sum_probs=118.3
Q ss_pred cCCceEEEeecccccCCHHHHHHHHHHhHHh-CCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcc
Q 002285 372 AGRKVMLGVDRLDMIKGIPQKILAFEKFLEE-NPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTV 450 (942)
Q Consensus 372 ~~~~iIl~VgRLd~~KGi~~lL~Af~~ll~~-~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~ 450 (942)
.++++|+++||+.+.||+..+++|+..+.++ .+++ .|+.+| +++.. ..+..++...+.. .
T Consensus 13 ~~~~~il~~g~~~~~K~~~~li~a~~~l~~~~~~~~----~l~i~G-----~~~~~----~~~~~~~~~~~~~------~ 73 (172)
T PF00534_consen 13 DKKKIILFIGRLDPEKGIDLLIEAFKKLKEKKNPNY----KLVIVG-----DGEYK----KELKNLIEKLNLK------E 73 (172)
T ss_dssp TTSEEEEEESESSGGGTHHHHHHHHHHHHHHHHTTE----EEEEES-----HCCHH----HHHHHHHHHTTCG------T
T ss_pred CCCeEEEEEecCccccCHHHHHHHHHHHHhhcCCCe----EEEEEc-----ccccc----ccccccccccccc------c
Confidence 5789999999999999999999999999875 6664 455443 33322 3344444433321 1
Q ss_pred cEEEeCCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhccCCCceEEEeCCCCccccc--CCceEEECCCCHHHH
Q 002285 451 PIHHLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSL--GAGAILVNPWNITEV 528 (942)
Q Consensus 451 pV~~l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l--g~~gllVnP~D~~~l 528 (942)
.|+|+ +.++.+++..+|+.||++|+||..||+|++++|||+| +.|+|+|+.+|..+.+ +.+|+++++.|++++
T Consensus 74 ~i~~~-~~~~~~~l~~~~~~~di~v~~s~~e~~~~~~~Ea~~~----g~pvI~~~~~~~~e~~~~~~~g~~~~~~~~~~l 148 (172)
T PF00534_consen 74 NIIFL-GYVPDDELDELYKSSDIFVSPSRNEGFGLSLLEAMAC----GCPVIASDIGGNNEIINDGVNGFLFDPNDIEEL 148 (172)
T ss_dssp TEEEE-ESHSHHHHHHHHHHTSEEEE-BSSBSS-HHHHHHHHT----T-EEEEESSTHHHHHSGTTTSEEEESTTSHHHH
T ss_pred ccccc-ccccccccccccccceecccccccccccccccccccc----ccceeeccccCCceeeccccceEEeCCCCHHHH
Confidence 25554 5666899999999999999999999999999999999 3579999988877777 568999999999999
Q ss_pred HHHHHHHhCCCHHHHHHHHHHHhH
Q 002285 529 ASSIGYALNMPADEREKRHLHNFM 552 (942)
Q Consensus 529 A~aI~~aL~m~~~er~~r~~~~~~ 552 (942)
+++|.+++.++ +.+..+.+++++
T Consensus 149 ~~~i~~~l~~~-~~~~~l~~~~~~ 171 (172)
T PF00534_consen 149 ADAIEKLLNDP-ELRQKLGKNARE 171 (172)
T ss_dssp HHHHHHHHHHH-HHHHHHHHHHHH
T ss_pred HHHHHHHHCCH-HHHHHHHHHhcC
Confidence 99999999875 455555555543
No 106
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.67 E-value=1.6e-15 Score=166.22 Aligned_cols=185 Identities=14% Similarity=0.135 Sum_probs=123.4
Q ss_pred CEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccC--ceEEeec
Q 002285 602 NRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYN--MWLAAEN 679 (942)
Q Consensus 602 ~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~--l~liaeh 679 (942)
.|+||+|+||||++. +..+++.++++|++|.+ .|..++|+|||+...+...+..++ .++|+.|
T Consensus 4 ~kli~~DlDGTLl~~--------------~~~~~~~~~~ai~~l~~-~Gi~~~iaTgR~~~~~~~~~~~l~l~~~~i~~n 68 (273)
T PRK00192 4 KLLVFTDLDGTLLDH--------------HTYSYEPAKPALKALKE-KGIPVIPCTSKTAAEVEVLRKELGLEDPFIVEN 68 (273)
T ss_pred ceEEEEcCcccCcCC--------------CCcCcHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHcCCCCCEEEEc
Confidence 589999999999985 23567889999999987 699999999999999999988875 3799999
Q ss_pred ceEEEeCCC--------------ceeecccCCCChhHHHHHHHHHHHHHhcCCCee-eeee-------------------
Q 002285 680 GMFLRLTTG--------------EWMTTMPENLNMDWVDSVKHVFEYFTERTPRSH-FEVR------------------- 725 (942)
Q Consensus 680 G~~ir~~~~--------------~w~~~~~~~~~~~w~~~v~~il~~~~~r~~Gs~-iE~K------------------- 725 (942)
|+.+...++ .|.... ..+ .+.+.++++.+.....-.+ +...
T Consensus 69 Ga~i~~~~~~~~~~~~~~~~~~~~~~~~~--~~~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (273)
T PRK00192 69 GAAIYIPKNYFPFQPDGERLKGDYWVIEL--GPP---YEELREILDEISDELGYPLKGFGDLSAEEVAELTGLSGESARL 143 (273)
T ss_pred CcEEEecccccccCCccccccCCceEEEc--CCC---HHHHHHHHHHHHHHhCCCeeehhhCCHHHHHHHhCcCHHHHHH
Confidence 999975322 222111 112 2445555544322211000 0000
Q ss_pred ----cceEEEEEeccchHHhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEECCCCHHHHHHHHHHHhcccCCCCCCC
Q 002285 726 ----ETSLVWNYKYADLEFGRLQARDILQHLWSGPISNASVDVVQGGRSVEVRAVGVTKGAAIDRILGEIVRHKGLKTPI 801 (942)
Q Consensus 726 ----~~sl~~hyr~ad~e~~~~qa~el~~~L~~~~~~~~~v~v~~G~~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~ 801 (942)
.....+-+. .++ .....+...+ ...++.+..++.++||.|.+ +||.|++++++.++ +++
T Consensus 144 ~~~~~~~~~~~~~-~~~----~~~~~~~~~l-----~~~~~~~~~~~~~~ei~~~~-~Kg~al~~l~~~~~------i~~ 206 (273)
T PRK00192 144 AKDREFSEPFLWN-GSE----AAKERFEEAL-----KRLGLKVTRGGRFLHLLGGG-DKGKAVRWLKELYR------RQD 206 (273)
T ss_pred HHhcccCCceeec-Cch----HHHHHHHHHH-----HHcCCEEEECCeEEEEeCCC-CHHHHHHHHHHHHh------ccC
Confidence 000000000 000 0111222222 12246666777899999999 99999999999988 678
Q ss_pred -ceEEEEeCCCCCCHHHHHhcCcC
Q 002285 802 -DYVLCIGHFLQKDEDIYTFFEPE 824 (942)
Q Consensus 802 -d~vl~iGD~d~nDEdMF~~~~~~ 824 (942)
+.+++||| +.||++||+.++..
T Consensus 207 ~~~v~~~GD-s~NDi~m~~~ag~~ 229 (273)
T PRK00192 207 GVETIALGD-SPNDLPMLEAADIA 229 (273)
T ss_pred CceEEEEcC-ChhhHHHHHhCCee
Confidence 99999999 99999999999863
No 107
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=99.66 E-value=2.4e-15 Score=177.90 Aligned_cols=188 Identities=16% Similarity=0.158 Sum_probs=124.0
Q ss_pred CCEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccC--ceEEee
Q 002285 601 NNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYN--MWLAAE 678 (942)
Q Consensus 601 ~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~--l~liae 678 (942)
.+|+||+|+||||++. +..+++.++++|++|.+ .|+.|+|+|||+...+..++..++ .++|++
T Consensus 415 ~~KLIfsDLDGTLLd~--------------d~~i~~~t~eAL~~L~e-kGI~~VIATGRs~~~i~~l~~~Lgl~~~~I~e 479 (694)
T PRK14502 415 FKKIVYTDLDGTLLNP--------------LTYSYSTALDALRLLKD-KELPLVFCSAKTMGEQDLYRNELGIKDPFITE 479 (694)
T ss_pred eeeEEEEECcCCCcCC--------------CCccCHHHHHHHHHHHH-cCCeEEEEeCCCHHHHHHHHHHcCCCCeEEEc
Confidence 5799999999999986 23456789999999997 699999999999999999888874 479999
Q ss_pred cceEEEeCCCcee------------ecccCCCChhHHHHHHHHHHHHHhcCC----------Ceeeeeecc---------
Q 002285 679 NGMFLRLTTGEWM------------TTMPENLNMDWVDSVKHVFEYFTERTP----------RSHFEVRET--------- 727 (942)
Q Consensus 679 hG~~ir~~~~~w~------------~~~~~~~~~~w~~~v~~il~~~~~r~~----------Gs~iE~K~~--------- 727 (942)
||+.+...++... .+.....+ .+.+.++++...+... +.++..+..
T Consensus 480 NGA~I~~~~~~~~~~~~~~~~~~~~iI~~~~l~---~e~i~~IL~~lke~l~~~i~ihv~~~~~~i~~~~d~~~~ei~~~ 556 (694)
T PRK14502 480 NGGAIFIPKDYFRLPFAYDRVAGNYLVIELGMA---YKDIRHILKKALAEACTEIENSEKAGNIFITSFGDMSVEDVSRL 556 (694)
T ss_pred CCCEEEECCCcccccccccccCCCeEEEEcCCC---HHHHHHHHHHHHHhhcceeeeeeccCcEEEecCCcccHHHHHHh
Confidence 9999985433100 01101122 3445555554433211 111111000
Q ss_pred ----------------eEEEEEeccchHHhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEECCCCHHHHHHHHHHHh
Q 002285 728 ----------------SLVWNYKYADLEFGRLQARDILQHLWSGPISNASVDVVQGGRSVEVRAVGVTKGAAIDRILGEI 791 (942)
Q Consensus 728 ----------------sl~~hyr~ad~e~~~~qa~el~~~L~~~~~~~~~v~v~~G~~~vEV~p~gvnKG~Av~~Ll~~l 791 (942)
+..+.+. .++ ....++.+.+ . ...+++..|..++||. .++|||.||++|++.+
T Consensus 557 TgL~~~~a~~a~~Re~seKIl~~-gd~----e~Leel~~~L-~----~~~l~v~~g~rfleI~-~gvdKG~AL~~L~e~~ 625 (694)
T PRK14502 557 TDLNLKQAELAKQREYSETVHIE-GDK----RSTNIVLNHI-Q----QSGLEYSFGGRFYEVT-GGNDKGKAIKILNELF 625 (694)
T ss_pred hCCCHHHHHHHhhccCceeEEEc-CCH----HHHHHHHHHH-H----HcCcEEEECCEEEEeC-CCCCHHHHHHHHHHHh
Confidence 0000000 000 1122333333 2 2256777799999999 5999999999999998
Q ss_pred cccCCCCCCCceEEEE--eCCCCCCHHHHHhcCcC
Q 002285 792 VRHKGLKTPIDYVLCI--GHFLQKDEDIYTFFEPE 824 (942)
Q Consensus 792 ~~~~~~~~~~d~vl~i--GD~d~nDEdMF~~~~~~ 824 (942)
+ ++.+.+++| || +.||.+||++++..
T Consensus 626 g------I~~~eViafalGD-s~NDisMLe~Ag~g 653 (694)
T PRK14502 626 R------LNFGNIHTFGLGD-SENDYSMLETVDSP 653 (694)
T ss_pred C------CCccceEEEEcCC-cHhhHHHHHhCCce
Confidence 7 445677777 99 99999999999863
No 108
>PLN02382 probable sucrose-phosphatase
Probab=99.64 E-value=2.4e-15 Score=173.51 Aligned_cols=196 Identities=15% Similarity=0.204 Sum_probs=124.9
Q ss_pred hhcccCCEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHH-HHhhhCCCCeEEEEcCCChhhHHHhhccc---
Q 002285 596 SYLQSNNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPL-KRLCDDPMTTVVVLSGSDRNVLDDNFGEY--- 671 (942)
Q Consensus 596 ~y~~s~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL-~~L~~d~g~~V~IvSGR~~~~L~~~~~~~--- 671 (942)
++..+.+.+|++|+||||++..+ +..+++....+| +++.+ .+..++++|||+...+.++.+.+
T Consensus 3 ~~~~~~~~lI~sDLDGTLL~~~~------------~~~~s~~~~~~l~~~~~~-~gi~fv~aTGR~~~~~~~l~~~~~l~ 69 (413)
T PLN02382 3 RLSGSPRLMIVSDLDHTMVDHHD------------PENLSLLRFNALWEAEYR-HDSLLVFSTGRSPTLYKELRKEKPLL 69 (413)
T ss_pred cccCCCCEEEEEcCCCcCcCCCC------------ccchhHHHHHHHHHHhhc-CCeeEEEEcCCCHHHHHHHHHhCCCC
Confidence 45667789999999999997521 224665555555 77775 69999999999988777765554
Q ss_pred -CceEEeecceEEEeCCC-----ceeecccCCCChhHHH-HHHHHHHHHHhcCCC----eeeeeecceEEEEEeccchHH
Q 002285 672 -NMWLAAENGMFLRLTTG-----EWMTTMPENLNMDWVD-SVKHVFEYFTERTPR----SHFEVRETSLVWNYKYADLEF 740 (942)
Q Consensus 672 -~l~liaehG~~ir~~~~-----~w~~~~~~~~~~~w~~-~v~~il~~~~~r~~G----s~iE~K~~sl~~hyr~ad~e~ 740 (942)
+..+|+.||++|...+. .|.... +..|.. .+.+. ....+. ...+.+...+.+++... .
T Consensus 70 ~p~~~I~~nGt~I~~~~~~~~d~~w~~~l----~~~w~~~~v~~~----~~~~~~l~~q~~~~~~~~Ki~~~~~~~---~ 138 (413)
T PLN02382 70 TPDITIMSVGTEIAYGESMVPDHGWVEYL----NKKWDREIVVEE----TSKFPELKLQPETEQRPHKVSFYVDKK---K 138 (413)
T ss_pred CCCEEEEcCCcEEEeCCCCccChhHHHHH----hccCChhhHHHH----HhcCCCcccCCcccCCCeEEEEEechH---H
Confidence 33588889999975321 232221 122321 12222 222322 22233445555555421 1
Q ss_pred hHHHHHHHHHHHhcCCCCCCCeEE-EEcCcEEEEEECCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHH
Q 002285 741 GRLQARDILQHLWSGPISNASVDV-VQGGRSVEVRAVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYT 819 (942)
Q Consensus 741 ~~~qa~el~~~L~~~~~~~~~v~v-~~G~~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~ 819 (942)
......++.+.+ .. ....+.+ ..+..++||.|+++|||.||+.|+++++..+ ++.+.+++||| +.||.+||+
T Consensus 139 ~~~~~~~l~~~~-~~--~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~~~~~g---i~~~~~iafGD-s~NDleMl~ 211 (413)
T PLN02382 139 AQEVIKELSERL-EK--RGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKKLKAEG---KAPVNTLVCGD-SGNDAELFS 211 (413)
T ss_pred hHHHHHHHHHHH-Hh--cCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHHhhhcC---CChhcEEEEeC-CHHHHHHHh
Confidence 111123333333 21 1123443 4678899999999999999999999983211 67889999999 999999999
Q ss_pred hcC
Q 002285 820 FFE 822 (942)
Q Consensus 820 ~~~ 822 (942)
.++
T Consensus 212 ~ag 214 (413)
T PLN02382 212 VPD 214 (413)
T ss_pred cCC
Confidence 987
No 109
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.64 E-value=7.4e-15 Score=158.47 Aligned_cols=188 Identities=15% Similarity=0.162 Sum_probs=124.8
Q ss_pred CEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccC--ceEEeec
Q 002285 602 NRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYN--MWLAAEN 679 (942)
Q Consensus 602 ~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~--l~liaeh 679 (942)
.|+||+|+||||++. ...+++.++++|++|.+ .|+.|+++|||+...+..++..++ .++|++|
T Consensus 1 ~KLIftDLDGTLLd~--------------~~~~~~~a~~aL~~Lk~-~GI~vVlaTGRt~~ev~~l~~~Lgl~~p~I~eN 65 (302)
T PRK12702 1 MRLVLSSLDGSLLDL--------------EFNSYGAARQALAALER-RSIPLVLYSLRTRAQLEHLCRQLRLEHPFICED 65 (302)
T ss_pred CcEEEEeCCCCCcCC--------------CCcCCHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHhCCCCeEEEeC
Confidence 479999999999986 23467889999999997 699999999999999999998884 4899999
Q ss_pred ceEEEeCCCceeec-c-cC---CCChhH-------HHHHHHHHHHHHhcCC------------------Ceee------e
Q 002285 680 GMFLRLTTGEWMTT-M-PE---NLNMDW-------VDSVKHVFEYFTERTP------------------RSHF------E 723 (942)
Q Consensus 680 G~~ir~~~~~w~~~-~-~~---~~~~~w-------~~~v~~il~~~~~r~~------------------Gs~i------E 723 (942)
|+.|..+.. |... . +. ..+..| ...++.+++....... |.-. -
T Consensus 66 GA~I~~p~~-~~~~~~~~~~~~~~~~~~~~~lg~~y~~ir~~L~~l~~~~~~~f~gF~d~t~~ei~~~TGL~~~~A~~A~ 144 (302)
T PRK12702 66 GSAIYVPEH-YFPAGILDEQWQHRPPYYVCALGLPYPCLRHILQQVRQDSHLDLIGFGDWTASELAAATGIPLEEAERAQ 144 (302)
T ss_pred CcEEEEccc-cccccccccccccCCCceEEecCCCHHHHHHHHHHHHHHhCCCceehhhCCHHHHHHHhCcCHHHHHHHH
Confidence 999985432 2200 0 00 001111 3344444444332211 1111 1
Q ss_pred eecceEEEEEeccchHHhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEE------------------C---CCCHHH
Q 002285 724 VRETSLVWNYKYADLEFGRLQARDILQHLWSGPISNASVDVVQGGRSVEVRA------------------V---GVTKGA 782 (942)
Q Consensus 724 ~K~~sl~~hyr~ad~e~~~~qa~el~~~L~~~~~~~~~v~v~~G~~~vEV~p------------------~---gvnKG~ 782 (942)
.+++|-.+++...+... .+.+ ...++.++.|...+.+.. . +++||.
T Consensus 145 ~Re~SEp~~w~~~~~~~--------~~~~-----~~~g~~~~~GgRf~H~l~~~~~~~~~~~~~~~~~~~~~~~~~dKg~ 211 (302)
T PRK12702 145 KREYSEIFSYSGDPARL--------REAF-----AQQEANLTQHLLRLHQLHFSDLPQWYLTGWMQPTLAAEPNSLPGEQ 211 (302)
T ss_pred hccCCcceEecCCHHHH--------HHHH-----HHcCCeEEecCceEEecccccccccccccccccccccccCCCCHHH
Confidence 13344445554322111 2222 223678888887777775 5 899999
Q ss_pred HHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCc
Q 002285 783 AIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 783 Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
|++.|.+.+.-.. ..-.+|++|| +.||.+|++++..
T Consensus 212 A~~~L~~~y~~~~----~~~~tiaLGD-spND~~mLe~~D~ 247 (302)
T PRK12702 212 AVQLLLDCYQRHL----GPIKALGIGC-SPPDLAFLRWSEQ 247 (302)
T ss_pred HHHHHHHHHHhcc----CCceEEEecC-ChhhHHHHHhCCe
Confidence 9999999876211 1226899999 9999999999976
No 110
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=99.60 E-value=4.8e-15 Score=157.91 Aligned_cols=187 Identities=18% Similarity=0.176 Sum_probs=117.7
Q ss_pred EEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccCc--eEEeecce
Q 002285 604 LLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYNM--WLAAENGM 681 (942)
Q Consensus 604 Li~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l--~liaehG~ 681 (942)
+||+|+||||++. . .++++++++|++|.+ .|+.|+++|||+...+..++..+++ ++|++||+
T Consensus 1 li~~DlDGTLl~~--------------~-~~~~~~~~ai~~l~~-~G~~~vi~TgR~~~~~~~~~~~lg~~~~~I~~NGa 64 (225)
T TIGR02461 1 VIFTDLDGTLLPP--------------G-YEPGPAREALEELKD-LGFPIVFVSSKTRAEQEYYREELGVEPPFIVENGG 64 (225)
T ss_pred CEEEeCCCCCcCC--------------C-CCchHHHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCCCCcEEEcCCc
Confidence 5899999999984 1 245679999999997 5999999999999999998888754 79999999
Q ss_pred EEEeCCC-------------ceeecccCCCChhHHHHHHHHHHHHHhcCCCeeeeeecceEEE--EEeccchHHh-----
Q 002285 682 FLRLTTG-------------EWMTTMPENLNMDWVDSVKHVFEYFTERTPRSHFEVRETSLVW--NYKYADLEFG----- 741 (942)
Q Consensus 682 ~ir~~~~-------------~w~~~~~~~~~~~w~~~v~~il~~~~~r~~Gs~iE~K~~sl~~--hyr~ad~e~~----- 741 (942)
.+..+.. ... +.....+ .+.++++++...++.+-.++.. ..... .+....+...
T Consensus 65 ~I~~~~~~~~~~~~~~~~~~~~~-i~~~~l~---~~~~~~il~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 138 (225)
T TIGR02461 65 AIFIPRGYFPFPVGAGREVGNYE-VIELGKP---VAKIRAALKEAENEYGLKYYGN--STAEEVEKLTGLPRELAPLAKR 138 (225)
T ss_pred EEEecCccccccccccccCCCeE-EEEcCCC---HHHHHHHHHHHHHhcCccchhc--CCHHHHHHHHCcCHHHHHHHHh
Confidence 9985321 110 1101122 3445555554433122111100 00000 0000000000
Q ss_pred -----------HHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEECCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCC
Q 002285 742 -----------RLQARDILQHLWSGPISNASVDVVQGGRSVEVRAVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHF 810 (942)
Q Consensus 742 -----------~~qa~el~~~L~~~~~~~~~v~v~~G~~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~ 810 (942)
..+..++.+.+ . ...+.+..+..++++. .++|||.|++.+++.++.. .+...+++|||
T Consensus 139 ~~~~ki~~~~~~e~~~~~~~~~-~----~~~~~~~~s~~~~~i~-~~~sK~~al~~l~~~~~~~----~~~~~~i~~GD- 207 (225)
T TIGR02461 139 REYSETIFLWSREGWEAILVTA-R----ARGLKYTHGGRFYTVH-GGSDKGKAIKRLLDLYKLR----PGAIESVGLGD- 207 (225)
T ss_pred hhcCCcccCCCHHHHHHHHHHH-H----HcCCcEEECCEEEEEC-CCCCHHHHHHHHHHHhccc----cCcccEEEEcC-
Confidence 00112222222 1 2356778887778875 4999999999999988631 24567999999
Q ss_pred CCCCHHHHHhcCc
Q 002285 811 LQKDEDIYTFFEP 823 (942)
Q Consensus 811 d~nDEdMF~~~~~ 823 (942)
+.||.+||++++.
T Consensus 208 ~~nD~~ml~~ag~ 220 (225)
T TIGR02461 208 SENDFPMFEVVDL 220 (225)
T ss_pred CHHHHHHHHhCCC
Confidence 9999999999975
No 111
>KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism]
Probab=99.55 E-value=1e-13 Score=150.01 Aligned_cols=165 Identities=18% Similarity=0.261 Sum_probs=131.1
Q ss_pred eeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHh-cCCceEEEeecccccCCHHHHHHHHHHhHHhCCCCCCcEEEE
Q 002285 335 RLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERF-AGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPSWRDKVVLI 413 (942)
Q Consensus 335 r~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~-~~~~iIl~VgRLd~~KGi~~lL~Af~~ll~~~P~~~~~vvLv 413 (942)
...++.++||.|+++.|.|.... +. .+...|+.++||-++||++.++..+.++.+++|+.| ++
T Consensus 167 ~p~kvsvIPnAv~~~~f~P~~~~------------~~S~~i~~ivv~sRLvyrKGiDll~~iIp~vc~~~p~vr----fi 230 (426)
T KOG1111|consen 167 APAKVSVIPNAVVTHTFTPDAAD------------KPSADIITIVVASRLVYRKGIDLLLEIIPSVCDKHPEVR----FI 230 (426)
T ss_pred CHhHeeeccceeeccccccCccc------------cCCCCeeEEEEEeeeeeccchHHHHHHHHHHHhcCCCee----EE
Confidence 46689999999999999985431 22 344788999999999999999999999999999976 44
Q ss_pred EEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhh
Q 002285 414 QIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVAC 493 (942)
Q Consensus 414 qi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~ 493 (942)
++ ||||....|++.+++.- + ..+|. +.|.++++++...|...|||+.||+.|.|+++++||+.|
T Consensus 231 i~-----GDGPk~i~lee~lEk~~--l--------~~rV~-~lG~v~h~~Vr~vl~~G~IFlntSlTEafc~~ivEAaSc 294 (426)
T KOG1111|consen 231 II-----GDGPKRIDLEEMLEKLF--L--------QDRVV-MLGTVPHDRVRDVLVRGDIFLNTSLTEAFCMVIVEAASC 294 (426)
T ss_pred Ee-----cCCcccchHHHHHHHhh--c--------cCceE-EecccchHHHHHHHhcCcEEeccHHHHHHHHHHHHHHhC
Confidence 33 89997766776666551 1 13466 468899999999999999999999999999999999999
Q ss_pred ccCCCce-EEEeCCCCcccccCCce-EEECCCCHHHHHHHHHHHhC
Q 002285 494 QASKKGV-LILSEFAGAAQSLGAGA-ILVNPWNITEVASSIGYALN 537 (942)
Q Consensus 494 ~~~~~G~-lIlSe~~G~~~~lg~~g-llVnP~D~~~lA~aI~~aL~ 537 (942)
|. +|.+..+|+.+.| ... +...+-.++++++++.++++
T Consensus 295 -----GL~VVsTrVGGIpeVL-P~d~i~~~~~~~~dl~~~v~~ai~ 334 (426)
T KOG1111|consen 295 -----GLPVVSTRVGGIPEVL-PEDMITLGEPGPDDLVGAVEKAIT 334 (426)
T ss_pred -----CCEEEEeecCCccccC-CccceeccCCChHHHHHHHHHHHH
Confidence 65 6666677877777 444 33455568888888888775
No 112
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=99.54 E-value=1.2e-14 Score=156.90 Aligned_cols=184 Identities=21% Similarity=0.295 Sum_probs=116.3
Q ss_pred CEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhccc----CceEEe
Q 002285 602 NRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEY----NMWLAA 677 (942)
Q Consensus 602 ~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~----~l~lia 677 (942)
++||++|+||||++. +.....++.+.|+ ....++..++++|||++..+.+.+... +.++|+
T Consensus 2 ~~ll~sDlD~Tl~~~--------------~~~~~~~l~~~l~-~~~~~~~~~v~~TGRs~~~~~~~~~~~~l~~Pd~~I~ 66 (247)
T PF05116_consen 2 PRLLASDLDGTLIDG--------------DDEALARLEELLE-QQARPEILFVYVTGRSLESVLRLLREYNLPQPDYIIT 66 (247)
T ss_dssp SEEEEEETBTTTBHC--------------HHHHHHHHHHHHH-HHHCCGEEEEEE-SS-HHHHHHHHHHCT-EE-SEEEE
T ss_pred CEEEEEECCCCCcCC--------------CHHHHHHHHHHHH-HhhCCCceEEEECCCCHHHHHHHHHhCCCCCCCEEEe
Confidence 689999999999921 1112355666666 334578999999999999999888765 357999
Q ss_pred ecceEEEeCC-----CceeecccCCCChhHH-HHHHHHHHHHHhcCCCeee----eeecceEEEEEeccchHHhHHHHHH
Q 002285 678 ENGMFLRLTT-----GEWMTTMPENLNMDWV-DSVKHVFEYFTERTPRSHF----EVRETSLVWNYKYADLEFGRLQARD 747 (942)
Q Consensus 678 ehG~~ir~~~-----~~w~~~~~~~~~~~w~-~~v~~il~~~~~r~~Gs~i----E~K~~sl~~hyr~ad~e~~~~qa~e 747 (942)
++|++|.... ..|...+ ...|. +.+.+++ .+.++... +.....+++.++..+.. ....+
T Consensus 67 svGt~I~~~~~~~~d~~w~~~i----~~~w~~~~v~~~l----~~~~~l~~q~~~~q~~~k~sy~~~~~~~~---~~~~~ 135 (247)
T PF05116_consen 67 SVGTEIYYGENWQPDEEWQAHI----DERWDRERVEEIL----AELPGLRPQPESEQRPFKISYYVDPDDSA---DILEE 135 (247)
T ss_dssp TTTTEEEESSTTEE-HHHHHHH----HTT--HHHHHHHH----HCHCCEEEGGCCCGCCTCECEEEETTSHC---HHHHH
T ss_pred cCCeEEEEcCCCcChHHHHHHH----HhcCChHHHHHHH----HHhhCcccCCccccCCeeEEEEEecccch---hHHHH
Confidence 9999998622 1232222 12333 2333333 33444332 22334555555543321 12334
Q ss_pred HHHHHhcCCCCCCCeEEEE-cCcEEEEEECCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhc
Q 002285 748 ILQHLWSGPISNASVDVVQ-GGRSVEVRAVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFF 821 (942)
Q Consensus 748 l~~~L~~~~~~~~~v~v~~-G~~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~ 821 (942)
+.+.+ .. ....+.++. +...++|.|++++||.||+.|+++++ ++.+.++++|| +.||.+||...
T Consensus 136 i~~~l-~~--~~l~~~~i~s~~~~ldilP~~a~K~~Al~~L~~~~~------~~~~~vl~aGD-SgND~~mL~~~ 200 (247)
T PF05116_consen 136 IRARL-RQ--RGLRVNVIYSNGRDLDILPKGASKGAALRYLMERWG------IPPEQVLVAGD-SGNDLEMLEGG 200 (247)
T ss_dssp HHHHH-HC--CTCEEEEEECTCCEEEEEETT-SHHHHHHHHHHHHT--------GGGEEEEES-SGGGHHHHCCS
T ss_pred HHHHH-HH--cCCCeeEEEccceeEEEccCCCCHHHHHHHHHHHhC------CCHHHEEEEeC-CCCcHHHHcCc
Confidence 44444 22 123445544 67889999999999999999999998 56889999999 99999999554
No 113
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=99.52 E-value=1e-12 Score=150.58 Aligned_cols=264 Identities=17% Similarity=0.143 Sum_probs=159.8
Q ss_pred CCCEEEEcCCchhhHHHHHHhhCCCCeEEEEeccCCCChhHhhcCCchHHH-HHHhhhccEEeecCHHHHHHHHHHHHHH
Q 002285 242 EGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSSEIHRTLPSRTEL-LRSVLAADLVGFHTYDYARHFVSACTRI 320 (942)
Q Consensus 242 ~~DiIwvHDyhL~llp~~Lr~~~p~~~I~~flH~PfP~~e~fr~lp~r~~i-l~~ll~aDlIgF~t~~~~~~Fl~~~~r~ 320 (942)
+..++|.+..-...+... .+..++++-++-.|+.... .-+....+ ...+..||+|...+....+.+..
T Consensus 102 ~~~i~~~~~P~~~~~~~~----~~~~~~Vyd~~D~~~~~~~--~~~~~~~~e~~~~~~ad~vi~~S~~l~~~~~~----- 170 (373)
T cd04950 102 GRPILWYYTPYTLPVAAL----LQASLVVYDCVDDLSAFPG--GPPELLEAERRLLKRADLVFTTSPSLYEAKRR----- 170 (373)
T ss_pred CCcEEEEeCccHHHHHhh----cCCCeEEEEcccchhccCC--CCHHHHHHHHHHHHhCCEEEECCHHHHHHHhh-----
Confidence 566888886544444443 4566777776644432110 00111111 22334688887777654433211
Q ss_pred hccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHhcCCceEEEeecccccCCHHHHHHHHHHhH
Q 002285 321 LGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFL 400 (942)
Q Consensus 321 l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi~~lL~Af~~ll 400 (942)
+ + .++.++|+|+|.+.|.+....+.. ...+ ...++++|+|+|++.+.+++. +|.++ .
T Consensus 171 -----------~-~--~~i~~i~ngvd~~~f~~~~~~~~~---~~~~--~~~~~~~i~y~G~l~~~~d~~-ll~~l---a 227 (373)
T cd04950 171 -----------L-N--PNVVLVPNGVDYEHFAAARDPPPP---PADL--AALPRPVIGYYGAIAEWLDLE-LLEAL---A 227 (373)
T ss_pred -----------C-C--CCEEEcccccCHHHhhcccccCCC---hhHH--hcCCCCEEEEEeccccccCHH-HHHHH---H
Confidence 1 1 467889999999999754322110 0111 124678999999999977664 34443 3
Q ss_pred HhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEECCCC
Q 002285 401 EENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVTSLR 480 (942)
Q Consensus 401 ~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~pSl~ 480 (942)
+.+|+++ ++| || +++...+ ...+ .. ...|+| .|.++.+++.++|+.||++++|+..
T Consensus 228 ~~~p~~~--~vl--iG-----~~~~~~~----~~~~----~~------~~nV~~-~G~~~~~~l~~~l~~~Dv~l~P~~~ 283 (373)
T cd04950 228 KARPDWS--FVL--IG-----PVDVSID----PSAL----LR------LPNVHY-LGPKPYKELPAYLAGFDVAILPFRL 283 (373)
T ss_pred HHCCCCE--EEE--EC-----CCcCccC----hhHh----cc------CCCEEE-eCCCCHHHHHHHHHhCCEEecCCcc
Confidence 4578864 444 43 3211101 1111 00 113654 5789999999999999999999863
Q ss_pred -----CCCChhHHHHHhhccCCCceEEEeCCCCcccccCCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHH
Q 002285 481 -----DGMNLVSYEFVACQASKKGVLILSEFAGAAQSLGAGAILVNPWNITEVASSIGYALNMPADEREKRHLHNFMHVT 555 (942)
Q Consensus 481 -----EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~lg~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~ 555 (942)
+++++.++||||| +.|||+|....+.+. +. +..+.+.|.++++++|.++|..+..++..+. ...++
T Consensus 284 ~~~~~~~~P~Kl~EylA~----G~PVVat~~~~~~~~-~~-~~~~~~~d~~~~~~ai~~~l~~~~~~~~~~~---~~~~~ 354 (373)
T cd04950 284 NELTRATSPLKLFEYLAA----GKPVVATPLPEVRRY-ED-EVVLIADDPEEFVAAIEKALLEDGPARERRR---LRLAA 354 (373)
T ss_pred chhhhcCCcchHHHHhcc----CCCEEecCcHHHHhh-cC-cEEEeCCCHHHHHHHHHHHHhcCCchHHHHH---HHHHH
Confidence 5789999999999 346777665443332 23 3444567999999999998765543333322 22688
Q ss_pred hcCHHHHHHHHHHHHHH
Q 002285 556 THTSQEWAATFVSELND 572 (942)
Q Consensus 556 ~~~~~~W~~~fl~~L~~ 572 (942)
+||++.=++.++..|.+
T Consensus 355 ~~sW~~~a~~~~~~l~~ 371 (373)
T cd04950 355 QNSWDARAAEMLEALQE 371 (373)
T ss_pred HCCHHHHHHHHHHHHHh
Confidence 89999888888866653
No 114
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=99.49 E-value=6.4e-12 Score=144.42 Aligned_cols=195 Identities=11% Similarity=0.056 Sum_probs=127.8
Q ss_pred eeEEEEeeCccCccccchhcCChhhHHHHHHHHHHh---cCCceEEEeecccccCCHHHHHHHHHHhHHh----CCCCCC
Q 002285 336 LTRVAAFPIGIDSDRFVRALELPQVQDHINELKERF---AGRKVMLGVDRLDMIKGIPQKILAFEKFLEE----NPSWRD 408 (942)
Q Consensus 336 ~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIl~VgRLd~~KGi~~lL~Af~~ll~~----~P~~~~ 408 (942)
..+|.+++++||.+.+.+. . ....+++++ +++++|+++||....||+..+++++..++.. .+++
T Consensus 172 ~~ki~v~g~~v~~~f~~~~-~------~~~~~r~~~gl~~~~~~il~~Gg~~g~~~~~~li~~l~~~~~~~~~~~~~~-- 242 (382)
T PLN02605 172 PSQIRVYGLPIRPSFARAV-R------PKDELRRELGMDEDLPAVLLMGGGEGMGPLEETARALGDSLYDKNLGKPIG-- 242 (382)
T ss_pred HHHEEEECcccCHhhccCC-C------CHHHHHHHcCCCCCCcEEEEECCCcccccHHHHHHHHHHhhccccccCCCc--
Confidence 4577888999987544321 1 112355555 3678999999999999999999999876521 3443
Q ss_pred cEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCCCCChhHH
Q 002285 409 KVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVTSLRDGMNLVSY 488 (942)
Q Consensus 409 ~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~l 488 (942)
.++.++ |+++. ++++++++.. + ..|++ .|++ +++..+|++||++|.+| .|++++
T Consensus 243 --~~~vi~----G~~~~---~~~~L~~~~~--~--------~~v~~-~G~~--~~~~~l~~aaDv~V~~~----g~~ti~ 296 (382)
T PLN02605 243 --QVVVIC----GRNKK---LQSKLESRDW--K--------IPVKV-RGFV--TNMEEWMGACDCIITKA----GPGTIA 296 (382)
T ss_pred --eEEEEE----CCCHH---HHHHHHhhcc--c--------CCeEE-Eecc--ccHHHHHHhCCEEEECC----CcchHH
Confidence 233333 33332 3344443311 1 12544 4555 47999999999999866 378999
Q ss_pred HHHhhccCCCceEEEeCC-----CCcccccCCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHHhcCHHHHH
Q 002285 489 EFVACQASKKGVLILSEF-----AGAAQSLGAGAILVNPWNITEVASSIGYALNMPADEREKRHLHNFMHVTTHTSQEWA 563 (942)
Q Consensus 489 EamA~~~~~~G~lIlSe~-----~G~~~~lg~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~ 563 (942)
||||| +.|+|++.. .|.++.+-.+|.-+.+.|+++++++|.++|.++++.++++.++++++...+....-+
T Consensus 297 EAma~----g~PvI~~~~~pgqe~gn~~~i~~~g~g~~~~~~~~la~~i~~ll~~~~~~~~~m~~~~~~~~~~~a~~~i~ 372 (382)
T PLN02605 297 EALIR----GLPIILNGYIPGQEEGNVPYVVDNGFGAFSESPKEIARIVAEWFGDKSDELEAMSENALKLARPEAVFDIV 372 (382)
T ss_pred HHHHc----CCCEEEecCCCccchhhHHHHHhCCceeecCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCchHHHHH
Confidence 99999 357888875 233343412222333589999999999999875666667777778877777766666
Q ss_pred HHHHHH
Q 002285 564 ATFVSE 569 (942)
Q Consensus 564 ~~fl~~ 569 (942)
+.+++.
T Consensus 373 ~~l~~~ 378 (382)
T PLN02605 373 HDLHEL 378 (382)
T ss_pred HHHHHH
Confidence 555443
No 115
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=99.39 E-value=2.7e-11 Score=139.32 Aligned_cols=186 Identities=16% Similarity=0.162 Sum_probs=144.1
Q ss_pred CCceEEEeecccccCCHHHHHHHHHHhHHhCCC---CCCcEEEEEEEcC-CCCChhHHHHHHHHHHHHHHhhccccCCcC
Q 002285 373 GRKVMLGVDRLDMIKGIPQKILAFEKFLEENPS---WRDKVVLIQIAVP-TRTDVPEYQKLTSQVHEIVGRINGRYGTLT 448 (942)
Q Consensus 373 ~~~iIl~VgRLd~~KGi~~lL~Af~~ll~~~P~---~~~~vvLvqi~~p-srgd~~~y~~l~~~l~~lv~~IN~~~~~~~ 448 (942)
.+.+++.+-|+.+-||+...|.||..+....|+ +. ..++..+.+ +.+...+..++..++.+++++.+.. +
T Consensus 272 ~d~~~~siN~~~pgkd~~l~l~a~~~~~~~i~~~~~~~--~hl~~~g~~G~d~~~sen~~~~~el~~lie~~~l~-g--- 345 (495)
T KOG0853|consen 272 IDRFFPSINRFEPGKDQDLALPAFTLLHDSIPEPSISS--EHLVVAGSRGYDERDSENVEYLKELLSLIEEYDLL-G--- 345 (495)
T ss_pred cceEeeeeeecCCCCCceeehhhHHhhhcccCCCCCCc--eEEEEecCCCccccchhhHHHHHHHHHHHHHhCcc-C---
Confidence 367888999999999999999999999888754 33 444433322 3333455556677778888775321 2
Q ss_pred cccEEEeCCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhccCCCceEEEeCCCCccccc--CCceEEECCCCHH
Q 002285 449 TVPIHHLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSL--GAGAILVNPWNIT 526 (942)
Q Consensus 449 ~~pV~~l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l--g~~gllVnP~D~~ 526 (942)
.++++....++.+...++..+.+.+.++..|-||+|++||||| +-|+|++..+|..|.+ |.+|++++| +.+
T Consensus 346 --~~v~~~~s~~~~~~yrl~adt~~v~~qPa~E~FGiv~IEAMa~----glPvvAt~~GGP~EiV~~~~tG~l~dp-~~e 418 (495)
T KOG0853|consen 346 --QFVWFLPSTTRVAKYRLAADTKGVLYQPANEHFGIVPIEAMAC----GLPVVATNNGGPAEIVVHGVTGLLIDP-GQE 418 (495)
T ss_pred --ceEEEecCCchHHHHHHHHhcceEEecCCCCCccceeHHHHhc----CCCEEEecCCCceEEEEcCCcceeeCC-chH
Confidence 2344556777888888888899999999999999999999999 3689999999999998 899999999 666
Q ss_pred ---HHHHHHHHHhCCCHHHHHHHHHHHhHHHHh-cCHHHHHHHHHHHHHH
Q 002285 527 ---EVASSIGYALNMPADEREKRHLHNFMHVTT-HTSQEWAATFVSELND 572 (942)
Q Consensus 527 ---~lA~aI~~aL~m~~~er~~r~~~~~~~v~~-~~~~~W~~~fl~~L~~ 572 (942)
.+|++|.++.+++. .+.++.++.+++|++ |++++..+++.+-+..
T Consensus 419 ~~~~~a~~~~kl~~~p~-l~~~~~~~G~~rV~e~fs~~~~~~ri~~~~~~ 467 (495)
T KOG0853|consen 419 AVAELADALLKLRRDPE-LWARMGKNGLKRVKEMFSWQHYSERIASVLGK 467 (495)
T ss_pred HHHHHHHHHHHHhcCHH-HHHHHHHHHHHHHHHHHhHHHHHHHHHHHhHh
Confidence 59999999998754 588888999999987 8876666666555553
No 116
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.34 E-value=3.1e-11 Score=125.40 Aligned_cols=119 Identities=29% Similarity=0.333 Sum_probs=83.9
Q ss_pred EeecccccCCHHHHHHHHHHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCC
Q 002285 379 GVDRLDMIKGIPQKILAFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRS 458 (942)
Q Consensus 379 ~VgRLd~~KGi~~lL~Af~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~ 458 (942)
++||+.+.||+..+++|+..+.+++|++ .++.+|.. +.....+..+... +. ...|.++...
T Consensus 109 ~~g~~~~~k~~~~~~~a~~~l~~~~~~~----~~~i~G~~-----~~~~~~~~~~~~~--------~~--~~~v~~~~~~ 169 (229)
T cd01635 109 FVGRLAPEKGLDDLIEAFALLKERGPDL----KLVIAGDG-----PEREYLEELLAAL--------LL--LDRVIFLGGL 169 (229)
T ss_pred EEEeecccCCHHHHHHHHHHHHHhCCCe----EEEEEeCC-----CChHHHHHHHHhc--------CC--cccEEEeCCC
Confidence 8999999999999999999999888774 46655532 1111111111111 11 1236555433
Q ss_pred CCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhccCCCceEEEeCCCCccccc--CCceEEE
Q 002285 459 LDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSL--GAGAILV 520 (942)
Q Consensus 459 v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l--g~~gllV 520 (942)
.+.+++..+++.||+++.||..||+|++++|||+| +.|+|+|+..+..+.+ +.+|++|
T Consensus 170 ~~~~~~~~~~~~~di~l~~~~~e~~~~~~~Eam~~----g~pvi~s~~~~~~e~i~~~~~g~~~ 229 (229)
T cd01635 170 DPEELLALLLAAADVFVLPSLREGFGLVVLEAMAC----GLPVIATDVGGPPEIVEDGLTGLLV 229 (229)
T ss_pred CcHHHHHHHhhcCCEEEecccccCcChHHHHHHhC----CCCEEEcCCCCcceEEECCCceEEC
Confidence 35667777777799999999999999999999999 3689999988887755 4567654
No 117
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=99.34 E-value=6.2e-11 Score=128.77 Aligned_cols=199 Identities=24% Similarity=0.343 Sum_probs=141.8
Q ss_pred EEEEeeCccCccccchh-cCChhhHHHHHHHHHHhcC--CceEEEeecccccCCHHHHHHHHHHhHHhCCCCCCcEEEEE
Q 002285 338 RVAAFPIGIDSDRFVRA-LELPQVQDHINELKERFAG--RKVMLGVDRLDMIKGIPQKILAFEKFLEENPSWRDKVVLIQ 414 (942)
Q Consensus 338 ~v~viP~GID~~~f~~~-~~~~~~~~~~~~lr~~~~~--~~iIl~VgRLd~~KGi~~lL~Af~~ll~~~P~~~~~vvLvq 414 (942)
++.++|+|++.+.+... .. ...+ ..+++++||+.+.||+..+++|+..+.+..++ +.++.
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~~~~----~~~~~ 235 (381)
T COG0438 173 KIVVIPNGIDTEKFAPARIG-------------LLPEGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKRGPD----IKLVI 235 (381)
T ss_pred CceEecCCcCHHHcCccccC-------------CCcccCceEEEEeeccChhcCHHHHHHHHHHhhhhcCC----eEEEE
Confidence 67889999999887642 10 0112 36899999999999999999999999887765 33444
Q ss_pred EEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhc
Q 002285 415 IAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQ 494 (942)
Q Consensus 415 i~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~ 494 (942)
++ .++.. ...+..++...+.. ..|.| .+.++.+++..+|+.||++++||..||+|++++|||+|
T Consensus 236 ~g-----~~~~~---~~~~~~~~~~~~~~------~~v~~-~g~~~~~~~~~~~~~~~~~v~ps~~e~~~~~~~Ea~a~- 299 (381)
T COG0438 236 VG-----DGPER---REELEKLAKKLGLE------DNVKF-LGYVPDEELAELLASADVFVLPSLSEGFGLVLLEAMAA- 299 (381)
T ss_pred Ec-----CCCcc---HHHHHHHHHHhCCC------CcEEE-ecccCHHHHHHHHHhCCEEEeccccccchHHHHHHHhc-
Confidence 43 22221 12222233333221 12554 67788888999999999999999999999999999999
Q ss_pred cCCCceEEEeCCCCcccccCC--ceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHH-HhcCHHHHHHHHHHHHH
Q 002285 495 ASKKGVLILSEFAGAAQSLGA--GAILVNPWNITEVASSIGYALNMPADEREKRHLHNFMHV-TTHTSQEWAATFVSELN 571 (942)
Q Consensus 495 ~~~~G~lIlSe~~G~~~~lg~--~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~fl~~L~ 571 (942)
+.|+|+|...|..+.+.. .|+++++.|.+++++++..++++. +.++......++.+ ..+++..-++.+++.+.
T Consensus 300 ---g~pvi~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (381)
T COG0438 300 ---GTPVIASDVGGIPEVVEDGETGLLVPPGDVEELADALEQLLEDP-ELREELGEAARERVEEEFSWERIAEQLLELYE 375 (381)
T ss_pred ---CCcEEECCCCChHHHhcCCCceEecCCCCHHHHHHHHHHHhcCH-HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 347888888888888733 388888889999999999999876 34444444344444 57888777766665555
Q ss_pred Hh
Q 002285 572 DT 573 (942)
Q Consensus 572 ~~ 573 (942)
..
T Consensus 376 ~~ 377 (381)
T COG0438 376 EL 377 (381)
T ss_pred HH
Confidence 43
No 118
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.31 E-value=2.3e-10 Score=129.12 Aligned_cols=241 Identities=15% Similarity=0.139 Sum_probs=146.2
Q ss_pred CCCEEEEcCCchhhHHHHHHhhCCCCeEEEEeccCCCChhHhhcCCchHHHHHHhhhccEEeecCHHHHHHHHHHHHHHh
Q 002285 242 EGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSSEIHRTLPSRTELLRSVLAADLVGFHTYDYARHFVSACTRIL 321 (942)
Q Consensus 242 ~~DiIwvHDyhL~llp~~Lr~~~p~~~I~~flH~PfP~~e~fr~lp~r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~l 321 (942)
++|+|++|..... ++..+..+..++++.++.|..+|. .. ..++ ...+|.|...++...+.
T Consensus 89 ~pDvI~~~~~~~~-~~~~~~a~~~~~p~v~~~~~~~~~--~~------~~~~--~~~~~~vi~~s~~~~~~--------- 148 (350)
T cd03785 89 KPDVVVGFGGYVS-GPVGLAAKLLGIPLVIHEQNAVPG--LA------NRLL--ARFADRVALSFPETAKY--------- 148 (350)
T ss_pred CCCEEEECCCCcc-hHHHHHHHHhCCCEEEEcCCCCcc--HH------HHHH--HHhhCEEEEcchhhhhc---------
Confidence 5799999975443 333343444466776655555542 11 1111 11257666555432221
Q ss_pred ccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHh---cCCceEEEeecccccCCHHHHH-HHHH
Q 002285 322 GLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERF---AGRKVMLGVDRLDMIKGIPQKI-LAFE 397 (942)
Q Consensus 322 ~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIl~VgRLd~~KGi~~lL-~Af~ 397 (942)
....++.++|+|+|.+.+.+.. . ++++ +++++|+.+++....|+...++ +|++
T Consensus 149 ------------~~~~~~~~i~n~v~~~~~~~~~------~-----~~~~~~~~~~~~i~~~~g~~~~~~~~~~l~~a~~ 205 (350)
T cd03785 149 ------------FPKDKAVVTGNPVREEILALDR------E-----RARLGLRPGKPTLLVFGGSQGARAINEAVPEALA 205 (350)
T ss_pred ------------CCCCcEEEECCCCchHHhhhhh------h-----HHhcCCCCCCeEEEEECCcHhHHHHHHHHHHHHH
Confidence 1235778899999987665321 0 2222 4577888888887888877654 7777
Q ss_pred HhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEEC
Q 002285 398 KFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVT 477 (942)
Q Consensus 398 ~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~p 477 (942)
.+.+ ++ +.++.++ |++ +.+++++. +.+. . ..|+++ +.+ +++..+|+.||++|.+
T Consensus 206 ~l~~--~~----~~~~~i~----G~g-~~~~l~~~----~~~~-~-------~~v~~~-g~~--~~~~~~l~~ad~~v~~ 259 (350)
T cd03785 206 ELLR--KR----LQVIHQT----GKG-DLEEVKKA----YEEL-G-------VNYEVF-PFI--DDMAAAYAAADLVISR 259 (350)
T ss_pred Hhhc--cC----eEEEEEc----CCc-cHHHHHHH----Hhcc-C-------CCeEEe-ehh--hhHHHHHHhcCEEEEC
Confidence 7642 33 3333233 333 22334433 3322 1 124443 433 7999999999999987
Q ss_pred CCCCCCChhHHHHHhhccCCCceEEEeCCCC--------ccccc--CCceEEECCC--CHHHHHHHHHHHhCCCHHHHHH
Q 002285 478 SLRDGMNLVSYEFVACQASKKGVLILSEFAG--------AAQSL--GAGAILVNPW--NITEVASSIGYALNMPADEREK 545 (942)
Q Consensus 478 Sl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G--------~~~~l--g~~gllVnP~--D~~~lA~aI~~aL~m~~~er~~ 545 (942)
| | +.+++|||+| +-|+|++...| .++.+ +..|++|++. |.++++++|..+++. ++.++.
T Consensus 260 s---g-~~t~~Eam~~----G~Pvv~~~~~~~~~~~~~~~~~~l~~~g~g~~v~~~~~~~~~l~~~i~~ll~~-~~~~~~ 330 (350)
T cd03785 260 A---G-ASTVAELAAL----GLPAILIPLPYAADDHQTANARALVKAGAAVLIPQEELTPERLAAALLELLSD-PERLKA 330 (350)
T ss_pred C---C-HhHHHHHHHh----CCCEEEeecCCCCCCcHHHhHHHHHhCCCEEEEecCCCCHHHHHHHHHHHhcC-HHHHHH
Confidence 7 3 5789999999 34677765443 12344 4579999987 999999999999964 556666
Q ss_pred HHHHHhHHHHhcCHH
Q 002285 546 RHLHNFMHVTTHTSQ 560 (942)
Q Consensus 546 r~~~~~~~v~~~~~~ 560 (942)
+..++++++..+...
T Consensus 331 ~~~~~~~~~~~~~~~ 345 (350)
T cd03785 331 MAEAARSLARPDAAE 345 (350)
T ss_pred HHHHHHhcCCCCHHH
Confidence 667777766555443
No 119
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=99.31 E-value=2.5e-10 Score=129.59 Aligned_cols=252 Identities=15% Similarity=0.040 Sum_probs=157.6
Q ss_pred CCCEEEEcCCchhhHHHHHHhhCCCCeEEEEeccCCCChhHhhcCCchHHHHHHhhhccEEeecCHHHHHHHHHHHHHHh
Q 002285 242 EGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSSEIHRTLPSRTELLRSVLAADLVGFHTYDYARHFVSACTRIL 321 (942)
Q Consensus 242 ~~DiIwvHDyhL~llp~~Lr~~~p~~~I~~flH~PfP~~e~fr~lp~r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~l 321 (942)
++|+|+.|+......+. +..+....|+.++.|..+|.. ...++. ..+|.+...+... +
T Consensus 91 ~pDvv~~~~~~~~~~~~-~~~~~~~~p~v~~~~~~~~~~--------~~r~~~--~~~d~ii~~~~~~---~-------- 148 (357)
T PRK00726 91 KPDVVVGFGGYVSGPGG-LAARLLGIPLVIHEQNAVPGL--------ANKLLA--RFAKKVATAFPGA---F-------- 148 (357)
T ss_pred CCCEEEECCCcchhHHH-HHHHHcCCCEEEEcCCCCccH--------HHHHHH--HHhchheECchhh---h--------
Confidence 57999999855433333 434445678877766544421 011111 1345544333210 0
Q ss_pred ccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHh-cCCceEEEeecccccCCHHHHH-HHHHHh
Q 002285 322 GLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERF-AGRKVMLGVDRLDMIKGIPQKI-LAFEKF 399 (942)
Q Consensus 322 ~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~-~~~~iIl~VgRLd~~KGi~~lL-~Af~~l 399 (942)
......++.++|+|||.+.+.+.. . ...+ .. .+.++|+++|+....|++..++ +|++++
T Consensus 149 ----------~~~~~~~i~vi~n~v~~~~~~~~~----~---~~~~--~~~~~~~~i~~~gg~~~~~~~~~~l~~a~~~~ 209 (357)
T PRK00726 149 ----------PEFFKPKAVVTGNPVREEILALAA----P---PARL--AGREGKPTLLVVGGSQGARVLNEAVPEALALL 209 (357)
T ss_pred ----------hccCCCCEEEECCCCChHhhcccc----h---hhhc--cCCCCCeEEEEECCcHhHHHHHHHHHHHHHHh
Confidence 001246789999999987654311 0 0111 11 3677889999999999987776 888877
Q ss_pred HHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEECCC
Q 002285 400 LEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVTSL 479 (942)
Q Consensus 400 l~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~pSl 479 (942)
.+. | .+++++ |+++. +++++.+ . .+. . |++ .+++ +++..+|..||+++.+|
T Consensus 210 ~~~-~-----~~~~~~-----G~g~~-~~~~~~~----~-~~~-------~-v~~-~g~~--~~~~~~~~~~d~~i~~~- 260 (357)
T PRK00726 210 PEA-L-----QVIHQT-----GKGDL-EEVRAAY----A-AGI-------N-AEV-VPFI--DDMAAAYAAADLVICRA- 260 (357)
T ss_pred hhC-c-----EEEEEc-----CCCcH-HHHHHHh----h-cCC-------c-EEE-eehH--hhHHHHHHhCCEEEECC-
Confidence 442 2 234444 44442 2332222 1 111 1 443 3444 68999999999999987
Q ss_pred CCCCChhHHHHHhhccCCCceEEEeCCCCc--------cccc--CCceEEECCCC--HHHHHHHHHHHhCCCHHHHHHHH
Q 002285 480 RDGMNLVSYEFVACQASKKGVLILSEFAGA--------AQSL--GAGAILVNPWN--ITEVASSIGYALNMPADEREKRH 547 (942)
Q Consensus 480 ~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~--------~~~l--g~~gllVnP~D--~~~lA~aI~~aL~m~~~er~~r~ 547 (942)
| +.+++|||+| +.|+|++...|. ++.+ +..|+++++.| +++++++|.+++++ ++.++++.
T Consensus 261 --g-~~~~~Ea~~~----g~Pvv~~~~~~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~l~~~i~~ll~~-~~~~~~~~ 332 (357)
T PRK00726 261 --G-ASTVAELAAA----GLPAILVPLPHAADDHQTANARALVDAGAALLIPQSDLTPEKLAEKLLELLSD-PERLEAMA 332 (357)
T ss_pred --C-HHHHHHHHHh----CCCEEEecCCCCCcCcHHHHHHHHHHCCCEEEEEcccCCHHHHHHHHHHHHcC-HHHHHHHH
Confidence 3 5889999999 346776654321 2334 45789999888 99999999999987 55677777
Q ss_pred HHHhHHHHhcCHHHHHHHHHHHHH
Q 002285 548 LHNFMHVTTHTSQEWAATFVSELN 571 (942)
Q Consensus 548 ~~~~~~v~~~~~~~W~~~fl~~L~ 571 (942)
++++++...++...-++.+++.+.
T Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~ 356 (357)
T PRK00726 333 EAARALGKPDAAERLADLIEELAR 356 (357)
T ss_pred HHHHhcCCcCHHHHHHHHHHHHhh
Confidence 778888888888888887776553
No 120
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=99.28 E-value=1.1e-09 Score=125.61 Aligned_cols=262 Identities=12% Similarity=0.085 Sum_probs=154.8
Q ss_pred CCCEEEEcCCchhhHHHHHHhhCCCCeEEEEeccCCCChhHhhcCCchHHHHHHhhhccEEeecCHHHHHHHHHHHHHHh
Q 002285 242 EGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSSEIHRTLPSRTELLRSVLAADLVGFHTYDYARHFVSACTRIL 321 (942)
Q Consensus 242 ~~DiIwvHDyhL~llp~~Lr~~~p~~~I~~flH~PfP~~e~fr~lp~r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~l 321 (942)
++|+|++| +....++.+.+....++|+...+ +-|-. + ...+. ..+|.+...+....+.+.+ .
T Consensus 104 ~pD~Vi~~-~~~~~~~~~~~~~~~~ip~~~~~-td~~~-------~-~~~~~---~~ad~i~~~s~~~~~~l~~-----~ 165 (380)
T PRK13609 104 KPDIVINT-FPIIAVPELKKQTGISIPTYNVL-TDFCL-------H-KIWVH---REVDRYFVATDHVKKVLVD-----I 165 (380)
T ss_pred CcCEEEEc-ChHHHHHHHHHhcCCCCCeEEEe-CCCCC-------C-ccccc---CCCCEEEECCHHHHHHHHH-----c
Confidence 57999996 44455666655555567765333 21210 0 01111 2578887766554433322 1
Q ss_pred ccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHh---cCCc-eEEEeecccccCCHHHHHHHHH
Q 002285 322 GLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERF---AGRK-VMLGVDRLDMIKGIPQKILAFE 397 (942)
Q Consensus 322 ~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~-iIl~VgRLd~~KGi~~lL~Af~ 397 (942)
|. ...++.++++.++. .|..... ...+++++ ++++ ++++.|++...||+..+++++.
T Consensus 166 gi-----------~~~ki~v~G~p~~~-~f~~~~~-------~~~~~~~~~l~~~~~~il~~~G~~~~~k~~~~li~~l~ 226 (380)
T PRK13609 166 GV-----------PPEQVVETGIPIRS-SFELKIN-------PDIIYNKYQLCPNKKILLIMAGAHGVLGNVKELCQSLM 226 (380)
T ss_pred CC-----------ChhHEEEECcccCh-HHcCcCC-------HHHHHHHcCCCCCCcEEEEEcCCCCCCcCHHHHHHHHh
Confidence 21 22345554443432 2332111 11244444 2444 4556789999999999998875
Q ss_pred HhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEEC
Q 002285 398 KFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVT 477 (942)
Q Consensus 398 ~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~p 477 (942)
+ .|++ .++.+++. +++ +++++++++...+ ..|+++ +++ +++..+|+.||+++.
T Consensus 227 ~----~~~~----~~viv~G~---~~~----~~~~l~~~~~~~~--------~~v~~~-g~~--~~~~~l~~~aD~~v~- 279 (380)
T PRK13609 227 S----VPDL----QVVVVCGK---NEA----LKQSLEDLQETNP--------DALKVF-GYV--ENIDELFRVTSCMIT- 279 (380)
T ss_pred h----CCCc----EEEEEeCC---CHH----HHHHHHHHHhcCC--------CcEEEE-ech--hhHHHHHHhccEEEe-
Confidence 3 3554 35544421 222 3445555544322 136655 555 468899999999874
Q ss_pred CCCCCCChhHHHHHhhccCCCceEEEeCC-CCcc----cccCCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhH
Q 002285 478 SLRDGMNLVSYEFVACQASKKGVLILSEF-AGAA----QSLGAGAILVNPWNITEVASSIGYALNMPADEREKRHLHNFM 552 (942)
Q Consensus 478 Sl~EG~~Lv~lEamA~~~~~~G~lIlSe~-~G~~----~~lg~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~ 552 (942)
++.|++++||||| +.|+|++.. .|.. ..+...|+.+.+.|.++++++|.++++++ +.+.++.++.++
T Consensus 280 ---~~gg~t~~EA~a~----g~PvI~~~~~~g~~~~n~~~~~~~G~~~~~~~~~~l~~~i~~ll~~~-~~~~~m~~~~~~ 351 (380)
T PRK13609 280 ---KPGGITLSEAAAL----GVPVILYKPVPGQEKENAMYFERKGAAVVIRDDEEVFAKTEALLQDD-MKLLQMKEAMKS 351 (380)
T ss_pred ---CCCchHHHHHHHh----CCCEEECCCCCCcchHHHHHHHhCCcEEEECCHHHHHHHHHHHHCCH-HHHHHHHHHHHH
Confidence 4458999999999 356777663 4421 12223455566789999999999999864 456666666777
Q ss_pred HHHhcCHHHHHHHHHHHHHHhHH
Q 002285 553 HVTTHTSQEWAATFVSELNDTIV 575 (942)
Q Consensus 553 ~v~~~~~~~W~~~fl~~L~~~~~ 575 (942)
....++.+..++.+++.+....+
T Consensus 352 ~~~~~s~~~i~~~i~~~~~~~~~ 374 (380)
T PRK13609 352 LYLPEPADHIVDDILAENHVEPN 374 (380)
T ss_pred hCCCchHHHHHHHHHHhhhhhhh
Confidence 77778889999888877765544
No 121
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=99.27 E-value=4.3e-10 Score=126.73 Aligned_cols=181 Identities=13% Similarity=0.094 Sum_probs=117.7
Q ss_pred EEeeCccCccccchhcCChhhHHHHHHHHHHh-cCCceEEEeecccccCCHHHH-HHHHHHhHHhCCCCCCcEEEEEEEc
Q 002285 340 AAFPIGIDSDRFVRALELPQVQDHINELKERF-AGRKVMLGVDRLDMIKGIPQK-ILAFEKFLEENPSWRDKVVLIQIAV 417 (942)
Q Consensus 340 ~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~-~~~~iIl~VgRLd~~KGi~~l-L~Af~~ll~~~P~~~~~vvLvqi~~ 417 (942)
.++|+|||...+.... + ...+ .+ ++.++|+++||....|++..+ ++|++++.+. +++ + +.++
T Consensus 153 ~~i~n~v~~~~~~~~~--~-----~~~~--~~~~~~~~i~~~gg~~~~~~~~~~l~~a~~~l~~~--~~~--~--~~~~- 216 (348)
T TIGR01133 153 VLVGNPVRQEIRSLPV--P-----RERF--GLREGKPTILVLGGSQGAKILNELVPKALAKLAEK--GIQ--I--VHQT- 216 (348)
T ss_pred eEEcCCcCHHHhcccc--h-----hhhc--CCCCCCeEEEEECCchhHHHHHHHHHHHHHHHhhc--CcE--E--EEEC-
Confidence 6889999976554211 0 0111 12 367789999998888997664 4788777543 332 3 2233
Q ss_pred CCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhccCC
Q 002285 418 PTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQASK 497 (942)
Q Consensus 418 psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~ 497 (942)
|+++. + ++++.+.+.+. ..+.++. ..++..+|+.||++|.+| | +.+++|||+|
T Consensus 217 ---g~~~~-~----~l~~~~~~~~l-------~~~v~~~----~~~~~~~l~~ad~~v~~~---g-~~~l~Ea~~~---- 269 (348)
T TIGR01133 217 ---GKNDL-E----KVKNVYQELGI-------EAIVTFI----DENMAAAYAAADLVISRA---G-ASTVAELAAA---- 269 (348)
T ss_pred ---CcchH-H----HHHHHHhhCCc-------eEEecCc----ccCHHHHHHhCCEEEECC---C-hhHHHHHHHc----
Confidence 33332 2 34444433221 1222222 227899999999999875 4 7899999999
Q ss_pred CceEEEeCCCCcc-------ccc--CCceEEECCCC--HHHHHHHHHHHhCCCHHHHHHHHHHHhHHHHhcCHHHHHH
Q 002285 498 KGVLILSEFAGAA-------QSL--GAGAILVNPWN--ITEVASSIGYALNMPADEREKRHLHNFMHVTTHTSQEWAA 564 (942)
Q Consensus 498 ~G~lIlSe~~G~~-------~~l--g~~gllVnP~D--~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~ 564 (942)
+.|+|++...|.. +.+ +.+|+++++.| +++++++|.+++++ ++.++++.+++++++..+...++++
T Consensus 270 g~Pvv~~~~~~~~~~~~~~~~~i~~~~~G~~~~~~~~~~~~l~~~i~~ll~~-~~~~~~~~~~~~~~~~~~~~~~i~~ 346 (348)
T TIGR01133 270 GVPAILIPYPYAADDQYYNAKFLEDLGAGLVIRQKELLPEKLLEALLKLLLD-PANLEAMAEAARKLAKPDAAKRIAE 346 (348)
T ss_pred CCCEEEeeCCCCccchhhHHHHHHHCCCEEEEecccCCHHHHHHHHHHHHcC-HHHHHHHHHHHHhcCCccHHHHHHh
Confidence 3577777765432 234 56799999887 99999999999964 5566677777777777776666554
No 122
>TIGR02094 more_P_ylases alpha-glucan phosphorylases. This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343.
Probab=99.24 E-value=7.8e-09 Score=124.47 Aligned_cols=180 Identities=14% Similarity=0.124 Sum_probs=125.7
Q ss_pred CCceEEEeecccccCCHHHHHHHHHHhHH--hCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHh--hccccCCcC
Q 002285 373 GRKVMLGVDRLDMIKGIPQKILAFEKFLE--ENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGR--INGRYGTLT 448 (942)
Q Consensus 373 ~~~iIl~VgRLd~~KGi~~lL~Af~~ll~--~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~--IN~~~~~~~ 448 (942)
+..+|.+|.|+...||++.++.+++++++ .+|+. .+.+|..|....++.. -+++.+.+.+++.+ ..+
T Consensus 388 d~~~ig~v~Rl~~yKr~dLil~~i~~l~~i~~~~~~--pvq~V~~Gka~p~d~~-gk~~i~~i~~la~~~~~~~------ 458 (601)
T TIGR02094 388 DVLTIGFARRFATYKRADLIFRDLERLARILNNPER--PVQIVFAGKAHPADGE-GKEIIQRIVEFSKRPEFRG------ 458 (601)
T ss_pred CCcEEEEEEcchhhhhHHHHHHHHHHHHHHhhCCCC--CeEEEEEEecCcccch-HHHHHHHHHHHHhcccCCC------
Confidence 45688899999999999999999999985 45543 2666666654434332 23456666666553 222
Q ss_pred cccEEEeCCCCCHHHHHHHHHHccEEEE-CCC-CCCCChhHHHHHhhccCCCceEEEeCCCCccccc--CCceEEECC--
Q 002285 449 TVPIHHLDRSLDFHALCALYAITDVALV-TSL-RDGMNLVSYEFVACQASKKGVLILSEFAGAAQSL--GAGAILVNP-- 522 (942)
Q Consensus 449 ~~pV~~l~~~v~~~el~aly~~ADv~v~-pSl-~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l--g~~gllVnP-- 522 (942)
.|.|+. ..+..--..+|..||++++ ||. +|.-|+.-+=||.- |.|..|-.-|...+. +.+|+.+.+
T Consensus 459 --kv~f~~-~Yd~~lA~~i~aG~Dv~L~~Psr~~EacGtsqMka~~n-----GgL~~sv~DG~~~E~~~~~nGf~f~~~~ 530 (601)
T TIGR02094 459 --RIVFLE-NYDINLARYLVSGVDVWLNNPRRPLEASGTSGMKAAMN-----GVLNLSILDGWWGEGYDGDNGWAIGDGE 530 (601)
T ss_pred --CEEEEc-CCCHHHHHHHhhhheeEEeCCCCCcCCchHHHHHHHHc-----CCceeecccCcccccCCCCcEEEECCCc
Confidence 366554 4555666778999999999 888 99999999999985 888888887776665 578999985
Q ss_pred ----------CCHHHHHHHHHHHh-----CCC----HHHHHHHHHHHhHH-HHhcCHHHHHHHHHHH
Q 002285 523 ----------WNITEVASSIGYAL-----NMP----ADEREKRHLHNFMH-VTTHTSQEWAATFVSE 569 (942)
Q Consensus 523 ----------~D~~~lA~aI~~aL-----~m~----~~er~~r~~~~~~~-v~~~~~~~W~~~fl~~ 569 (942)
.|.+++-++|.+++ +.+ +..-.++++++... ...+++.+-++.+++.
T Consensus 531 ~~~~~~~~d~~da~~l~~~L~~ai~~~yy~~~~~~~p~~W~~~~k~am~~~~~~fsw~r~a~~Y~~~ 597 (601)
T TIGR02094 531 EYDDEEEQDRLDAEALYDLLENEVIPLYYDRDEKGIPADWVEMMKESIATIAPRFSTNRMVREYVDK 597 (601)
T ss_pred cccccccccCCCHHHHHHHHHHHHHHHHhcCCcccCcHHHHHHHHHHHhccCCCCCHHHHHHHHHHH
Confidence 89999999998776 221 11233444433322 2357888877777653
No 123
>KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=99.22 E-value=2.7e-09 Score=115.34 Aligned_cols=308 Identities=12% Similarity=0.217 Sum_probs=190.7
Q ss_pred HHHHHHHHHHHHHHHHhh---cC-CCCEEEEc--CCchhhHHHHHHhhCCCCeEEEEeccCCCChhHhhcCCchHHHHHH
Q 002285 222 FDAYKRANQMFAKVVNNI---YE-EGDVVWCH--DYHLMFLPQCLKEYNNNMKVGWFLHTPFPSSEIHRTLPSRTELLRS 295 (942)
Q Consensus 222 w~~Y~~vN~~fa~~i~~~---~~-~~DiIwvH--DyhL~llp~~Lr~~~p~~~I~~flH~PfP~~e~fr~lp~r~~il~~ 295 (942)
|..+.-+-|..+..|+.. ++ ++|| ||- .|-+. .| .+|+ ....+||...|.|--|.++...+-.|..- +
T Consensus 126 ~~hfTllgQaigsmIl~~Eai~r~~Pdi-~IDtMGY~fs-~p-~~r~-l~~~~V~aYvHYP~iS~DML~~l~qrq~s--~ 199 (465)
T KOG1387|consen 126 WKHFTLLGQAIGSMILAFEAIIRFPPDI-FIDTMGYPFS-YP-IFRR-LRRIPVVAYVHYPTISTDMLKKLFQRQKS--G 199 (465)
T ss_pred ccceehHHHHHHHHHHHHHHHHhCCchh-eEecCCCcch-hH-HHHH-HccCceEEEEecccccHHHHHHHHhhhhc--c
Confidence 556666666666665533 34 6674 554 44332 23 2333 45789999999998888876554332110 1
Q ss_pred hhhccEEeecCHHHHHHHHHHHHHHhccccC---------CCce-e-cCCeeeEEEEeeCccCccccchhcCChhhHHHH
Q 002285 296 VLAADLVGFHTYDYARHFVSACTRILGLEGT---------PEGV-E-DQGRLTRVAAFPIGIDSDRFVRALELPQVQDHI 364 (942)
Q Consensus 296 ll~aDlIgF~t~~~~~~Fl~~~~r~l~~~~~---------~~~i-~-~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~ 364 (942)
+ ..+---.|-|.|..--. ..|.... ...| + ++.+ .+.++..--+++.+.....+
T Consensus 200 ~-----l~~~KlaY~rlFa~lY~-~~G~~ad~vm~NssWT~nHI~qiW~~~--~~~iVyPPC~~e~lks~~~t------- 264 (465)
T KOG1387|consen 200 I-----LVWGKLAYWRLFALLYQ-SAGSKADIVMTNSSWTNNHIKQIWQSN--TCSIVYPPCSTEDLKSKFGT------- 264 (465)
T ss_pred h-----hhhHHHHHHHHHHHHHH-hccccceEEEecchhhHHHHHHHhhcc--ceeEEcCCCCHHHHHHHhcc-------
Confidence 1 11111234444532111 1111100 0001 0 1212 22222222333322211110
Q ss_pred HHHHHHhcCCceEEEeecccccCCHHHHHHHHHHhHHhCCC--CCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhcc
Q 002285 365 NELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPS--WRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRING 442 (942)
Q Consensus 365 ~~lr~~~~~~~iIl~VgRLd~~KGi~~lL~Af~~ll~~~P~--~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~ 442 (942)
+-+....+|++|.+-|.|++. .|+-++.++.+.|. ....+.|+++| ..|+... ++.-+.++.++.+++.
T Consensus 265 -----e~~r~~~ll~l~Q~RPEKnH~-~Lql~Al~~~~~pl~a~~~~iKL~ivG-ScRneeD--~ervk~Lkd~a~~L~i 335 (465)
T KOG1387|consen 265 -----EGERENQLLSLAQFRPEKNHK-ILQLFALYLKNEPLEASVSPIKLIIVG-SCRNEED--EERVKSLKDLAEELKI 335 (465)
T ss_pred -----cCCcceEEEEEeecCcccccH-HHHHHHHHHhcCchhhccCCceEEEEe-ccCChhh--HHHHHHHHHHHHhcCC
Confidence 113457899999999999999 78888888888887 33446777554 4444322 2334456666666654
Q ss_pred ccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhccCCCceEEEeCCCCcc--ccc----C-C
Q 002285 443 RYGTLTTVPIHHLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAA--QSL----G-A 515 (942)
Q Consensus 443 ~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~--~~l----g-~ 515 (942)
.- .|.| ...++.+++..+|..|-+.|.+-..|-||+.+.||||+ |.+.++..+|.. +++ | .
T Consensus 336 ~~------~v~F-~~N~Py~~lv~lL~~a~iGvh~MwNEHFGIsVVEyMAA-----GlIpi~h~SgGP~lDIV~~~~G~~ 403 (465)
T KOG1387|consen 336 PK------HVQF-EKNVPYEKLVELLGKATIGVHTMWNEHFGISVVEYMAA-----GLIPIVHNSGGPLLDIVTPWDGET 403 (465)
T ss_pred cc------ceEE-EecCCHHHHHHHhccceeehhhhhhhhcchhHHHHHhc-----CceEEEeCCCCCceeeeeccCCcc
Confidence 31 2554 57899999999999999999999999999999999999 776666555433 222 4 4
Q ss_pred ceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHHhcCHHHHHHHHHHHHHHh
Q 002285 516 GAILVNPWNITEVASSIGYALNMPADEREKRHLHNFMHVTTHTSQEWAATFVSELNDT 573 (942)
Q Consensus 516 ~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~L~~~ 573 (942)
+|++.. +.++.|++|.+++.+..++|..+.+.++..+.+++-+.+-++|...+...
T Consensus 404 tGFla~--t~~EYaE~iLkIv~~~~~~r~~~r~~AR~s~~RFsE~~F~kd~~~~i~kl 459 (465)
T KOG1387|consen 404 TGFLAP--TDEEYAEAILKIVKLNYDERNMMRRNARKSLARFGELKFDKDWENPICKL 459 (465)
T ss_pred ceeecC--ChHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhhHHHHHHhHhHHHHHh
Confidence 788873 67789999999999999998888888899999999888888887655443
No 124
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=99.20 E-value=1.8e-09 Score=122.59 Aligned_cols=242 Identities=12% Similarity=0.044 Sum_probs=139.8
Q ss_pred CCCEEEEcCCchhhHHHHHHhhCCCCeEEEEeccCCCChhHhhcCCch--HHHHHHhhhccEEeecCHHHHHHHHHHHHH
Q 002285 242 EGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSSEIHRTLPSR--TELLRSVLAADLVGFHTYDYARHFVSACTR 319 (942)
Q Consensus 242 ~~DiIwvHDyhL~llp~~Lr~~~p~~~I~~flH~PfP~~e~fr~lp~r--~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r 319 (942)
++|+|++|++....++..+..+..++|++++.|.-.. .+ +..++. ...+. ..+|.+...+....+++.+
T Consensus 88 ~pDvV~~~g~~~~~~~~~~aa~~~~iPvv~~~~g~~s-~~--~~~~~~~~r~~~~--~~ad~~~~~s~~~~~~l~~---- 158 (363)
T cd03786 88 KPDLVLVLGDTNETLAAALAAFKLGIPVAHVEAGLRS-FD--RGMPDEENRHAID--KLSDLHFAPTEEARRNLLQ---- 158 (363)
T ss_pred CCCEEEEeCCchHHHHHHHHHHHcCCCEEEEeccccc-CC--CCCCchHHHHHHH--HHhhhccCCCHHHHHHHHH----
Confidence 6799999987666565555544457888876653111 00 011211 11111 1245544444333333221
Q ss_pred HhccccCCCceecCCeeeEEEEeeCcc-CccccchhcCChhhHHHHHHHHHHh--c-CCceEEEeecccc---cCCHHHH
Q 002285 320 ILGLEGTPEGVEDQGRLTRVAAFPIGI-DSDRFVRALELPQVQDHINELKERF--A-GRKVMLGVDRLDM---IKGIPQK 392 (942)
Q Consensus 320 ~l~~~~~~~~i~~~gr~~~v~viP~GI-D~~~f~~~~~~~~~~~~~~~lr~~~--~-~~~iIl~VgRLd~---~KGi~~l 392 (942)
++....+|.++++++ |...+....... ...++.+ . ++.+++.++|+.. .||+..+
T Consensus 159 ------------~G~~~~kI~vign~v~d~~~~~~~~~~~------~~~~~~~~~~~~~~vlv~~~r~~~~~~~k~~~~l 220 (363)
T cd03786 159 ------------EGEPPERIFVVGNTMIDALLRLLELAKK------ELILELLGLLPKKYILVTLHRVENVDDGEQLEEI 220 (363)
T ss_pred ------------cCCCcccEEEECchHHHHHHHHHHhhcc------chhhhhcccCCCCEEEEEeCCccccCChHHHHHH
Confidence 222356788899885 654333211100 0111222 2 3456778999875 7999999
Q ss_pred HHHHHHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHcc
Q 002285 393 ILAFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITD 472 (942)
Q Consensus 393 L~Af~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~AD 472 (942)
++|++++.+. + +.++.. ++++....+++ .+.+.+.. . ..|+| .+....+++..+|+.||
T Consensus 221 ~~al~~l~~~--~----~~vi~~-----~~~~~~~~l~~----~~~~~~~~---~--~~v~~-~~~~~~~~~~~l~~~ad 279 (363)
T cd03786 221 LEALAELAEE--D----VPVVFP-----NHPRTRPRIRE----AGLEFLGH---H--PNVLL-ISPLGYLYFLLLLKNAD 279 (363)
T ss_pred HHHHHHHHhc--C----CEEEEE-----CCCChHHHHHH----HHHhhccC---C--CCEEE-ECCcCHHHHHHHHHcCc
Confidence 9999988543 2 344432 23333333443 33333210 0 12544 44566889999999999
Q ss_pred EEEECCCCCCCChhHHHHHhhccCCCceEEEeCCCCcccccCCceEEECCC-CHHHHHHHHHHHhCCCH
Q 002285 473 VALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSLGAGAILVNPW-NITEVASSIGYALNMPA 540 (942)
Q Consensus 473 v~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~lg~~gllVnP~-D~~~lA~aI~~aL~m~~ 540 (942)
++|.+|- | +..|||+| +-|+|++...+...++..+|+.+.+. |.++++++|.++++++.
T Consensus 280 ~~v~~Sg----g-i~~Ea~~~----g~PvI~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~i~~ll~~~~ 339 (363)
T cd03786 280 LVLTDSG----G-IQEEASFL----GVPVLNLRDRTERPETVESGTNVLVGTDPEAILAAIEKLLSDEF 339 (363)
T ss_pred EEEEcCc----c-HHhhhhhc----CCCEEeeCCCCccchhhheeeEEecCCCHHHHHHHHHHHhcCch
Confidence 9999994 4 47899998 35788876655454443566655544 79999999999998653
No 125
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=99.18 E-value=3.4e-09 Score=120.95 Aligned_cols=242 Identities=14% Similarity=0.139 Sum_probs=138.7
Q ss_pred CCCEEEEcCCchhhHHHHHHhhCCCCeEEEEeccCCCChhHhhcCCchHHHHHHhh--hccEEeecCHHHHHHHHHHHHH
Q 002285 242 EGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSSEIHRTLPSRTELLRSVL--AADLVGFHTYDYARHFVSACTR 319 (942)
Q Consensus 242 ~~DiIwvHDyhL~llp~~Lr~~~p~~~I~~flH~PfP~~e~fr~lp~r~~il~~ll--~aDlIgF~t~~~~~~Fl~~~~r 319 (942)
++|+|++|......+...+-.+.-++|+++..+.- -+.+.+..+| +++.+.+. .+|++.-.+....+++.+
T Consensus 86 ~pDiv~~~gd~~~~la~a~aa~~~~ipv~h~~~g~-~s~~~~~~~~--~~~~r~~~~~~ad~~~~~s~~~~~~l~~---- 158 (365)
T TIGR00236 86 KPDIVLVQGDTTTTLAGALAAFYLQIPVGHVEAGL-RTGDRYSPMP--EEINRQLTGHIADLHFAPTEQAKDNLLR---- 158 (365)
T ss_pred CCCEEEEeCCchHHHHHHHHHHHhCCCEEEEeCCC-CcCCCCCCCc--cHHHHHHHHHHHHhccCCCHHHHHHHHH----
Confidence 57999999644444444443334467887554321 1111111122 22222211 256655556555555432
Q ss_pred HhccccCCCceecCCeeeEEEEeeCcc-CccccchhcCChhhHHHHHHHHHHhc-CCceEEE-eecc-cccCCHHHHHHH
Q 002285 320 ILGLEGTPEGVEDQGRLTRVAAFPIGI-DSDRFVRALELPQVQDHINELKERFA-GRKVMLG-VDRL-DMIKGIPQKILA 395 (942)
Q Consensus 320 ~l~~~~~~~~i~~~gr~~~v~viP~GI-D~~~f~~~~~~~~~~~~~~~lr~~~~-~~~iIl~-VgRL-d~~KGi~~lL~A 395 (942)
.| ....+|.++++|+ |...+.... . ....++++++ ++.+++. ..|. ...||+..+++|
T Consensus 159 -~G-----------~~~~~I~vign~~~d~~~~~~~~-~-----~~~~~~~~~~~~~~~vl~~~hr~~~~~k~~~~ll~a 220 (365)
T TIGR00236 159 -EN-----------VKADSIFVTGNTVIDALLTNVEI-A-----YSSPVLSEFGEDKRYILLTLHRRENVGEPLENIFKA 220 (365)
T ss_pred -cC-----------CCcccEEEeCChHHHHHHHHHhh-c-----cchhHHHhcCCCCCEEEEecCchhhhhhHHHHHHHH
Confidence 12 2345789999996 543221110 0 1123444553 3345554 4465 345999999999
Q ss_pred HHHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEE
Q 002285 396 FEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVAL 475 (942)
Q Consensus 396 f~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v 475 (942)
+.++.+++|+++ ++.++.|. +. .+.++. ..++. ...|++ .+.++..++..+|+.||+++
T Consensus 221 ~~~l~~~~~~~~----~vi~~~~~----~~---~~~~~~---~~~~~------~~~v~~-~~~~~~~~~~~~l~~ad~vv 279 (365)
T TIGR00236 221 IREIVEEFEDVQ----IVYPVHLN----PV---VREPLH---KHLGD------SKRVHL-IEPLEYLDFLNLAANSHLIL 279 (365)
T ss_pred HHHHHHHCCCCE----EEEECCCC----hH---HHHHHH---HHhCC------CCCEEE-ECCCChHHHHHHHHhCCEEE
Confidence 999988888754 44333221 11 122222 22211 013554 46788999999999999999
Q ss_pred ECCCCCCCChhHHHHHhhccCCCceEEEe-CCCCccccc-CCceEEECCCCHHHHHHHHHHHhCCC
Q 002285 476 VTSLRDGMNLVSYEFVACQASKKGVLILS-EFAGAAQSL-GAGAILVNPWNITEVASSIGYALNMP 539 (942)
Q Consensus 476 ~pSl~EG~~Lv~lEamA~~~~~~G~lIlS-e~~G~~~~l-g~~gllVnP~D~~~lA~aI~~aL~m~ 539 (942)
.+| |.+.+|||+| +.|+|++ +.+|..+.+ ...++++ +.|+++++++|.++++.+
T Consensus 280 ~~S-----g~~~~EA~a~----g~PvI~~~~~~~~~e~~~~g~~~lv-~~d~~~i~~ai~~ll~~~ 335 (365)
T TIGR00236 280 TDS-----GGVQEEAPSL----GKPVLVLRDTTERPETVEAGTNKLV-GTDKENITKAAKRLLTDP 335 (365)
T ss_pred ECC-----hhHHHHHHHc----CCCEEECCCCCCChHHHhcCceEEe-CCCHHHHHHHHHHHHhCh
Confidence 988 4568999999 3466665 445544444 2345666 589999999999999754
No 126
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1. This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=99.14 E-value=5.8e-09 Score=123.98 Aligned_cols=279 Identities=11% Similarity=0.122 Sum_probs=170.2
Q ss_pred HHHHHHHHHHHHHhh----cCCCCEEE--EcCCchhhHHHHHHhhCCCCeEEEEeccCCCChhHhhcCCchHHHHHHhhh
Q 002285 225 YKRANQMFAKVVNNI----YEEGDVVW--CHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSSEIHRTLPSRTELLRSVLA 298 (942)
Q Consensus 225 Y~~vN~~fa~~i~~~----~~~~DiIw--vHDyhL~llp~~Lr~~~p~~~I~~flH~PfP~~e~fr~lp~r~~il~~ll~ 298 (942)
|...+..++..+.+. ..++|++. ++.-|... +....|..++.+..|+ -+ . ........+..+..
T Consensus 203 f~~~~eLi~efl~~l~~~~~~~~d~~Iva~Dr~~~~~----~~~~~~~~~~~ls~f~-~~--~---~~~~y~~~l~~~~~ 272 (519)
T TIGR03713 203 YSNMDELIREKFQRYLKVEVKDDDEIIVASDDRHNFL----VADTFPAKNLIFSLFS-ER--N---RHHTYLDLYESLSR 272 (519)
T ss_pred ECCHHHHHHHHHHHHHHhhCCCCCEEEEEcCchhhhh----HhhcCccceEEEEecc-Cc--c---cccchhhhhhChhh
Confidence 333444444443333 46888888 67777655 3333443345556666 11 1 00112355666667
Q ss_pred ccEEeecCHHHHHHHHHHHHHHhccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHhcCCceEE
Q 002285 299 ADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERFAGRKVML 378 (942)
Q Consensus 299 aDlIgF~t~~~~~~Fl~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl 378 (942)
+|.|...|..-.+..... +.. .. ...+|..+|.+.- . ... . ..++..++.|.+
T Consensus 273 ~d~iIv~T~~q~~~l~~~----~~~--------~~-~~~~v~~Ip~~~~-~-~~~--~----------~s~r~~~~~I~v 325 (519)
T TIGR03713 273 ADLIIVDREDIERLLEEN----YRE--------NY-VEFDISRITPFDT-R-LRL--G----------QSQQLYETEIGF 325 (519)
T ss_pred cCeEEEcCHHHHHHHHHH----hhh--------cc-cCCcceeeCccce-E-Eec--C----------hhhcccceEEEE
Confidence 787766564433322211 110 00 1234556776543 1 111 0 111224455556
Q ss_pred EeecccccCCHHHHHHHHHHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcC----------
Q 002285 379 GVDRLDMIKGIPQKILAFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLT---------- 448 (942)
Q Consensus 379 ~VgRLd~~KGi~~lL~Af~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~---------- 448 (942)
++||| +.|-+..+|+|+.++.+++|+.. +.| .|.. +.. ++.+.+++++.++|..++...
T Consensus 326 ~idrL-~ek~~~~~I~av~~~~~~~p~~~--L~~--~gy~---~~~---~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~ 394 (519)
T TIGR03713 326 WIDGL-SDEELQQILQQLLQYILKNPDYE--LKI--LTYN---NDN---DITQLLEDILEQINEEYNQDKNFFSLSEQDE 394 (519)
T ss_pred EcCCC-ChHHHHHHHHHHHHHHhhCCCeE--EEE--EEec---Cch---hHHHHHHHHHHHHHhhhchhhhccccchhhh
Confidence 66699 99999999999999999999965 444 4322 111 234455556565544421100
Q ss_pred ------------cccEEEeCCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhccCCCceEEEeCCCCccccc--C
Q 002285 449 ------------TVPIHHLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSL--G 514 (942)
Q Consensus 449 ------------~~pV~~l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l--g 514 (942)
-...+.|.+..+..++...|..|.++|.+|..|||+ +.+|||+. |++++ .-|..+.+ |
T Consensus 395 ~~~~~~~~~~~~~~~~v~f~gy~~e~dl~~~~~~arl~id~s~~eg~~-~~ieAiS~-----GiPqI--nyg~~~~V~d~ 466 (519)
T TIGR03713 395 NQPILQTDEEQKEKERIAFTTLTNEEDLISALDKLRLIIDLSKEPDLY-TQISGISA-----GIPQI--NKVETDYVEHN 466 (519)
T ss_pred hhhcccchhhcccccEEEEEecCCHHHHHHHHhhheEEEECCCCCChH-HHHHHHHc-----CCCee--ecCCceeeEcC
Confidence 001345667777789999999999999999999999 99999997 76555 55667777 8
Q ss_pred CceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHHhcCHHHH
Q 002285 515 AGAILVNPWNITEVASSIGYALNMPADEREKRHLHNFMHVTTHTSQEW 562 (942)
Q Consensus 515 ~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~~~~~W 562 (942)
.+|++| .|+.++++||..+|..+ .........+++.+..|+...-
T Consensus 467 ~NG~li--~d~~~l~~al~~~L~~~-~~wn~~~~~sy~~~~~yS~~~i 511 (519)
T TIGR03713 467 KNGYII--DDISELLKALDYYLDNL-KNWNYSLAYSIKLIDDYSSENI 511 (519)
T ss_pred CCcEEe--CCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHhhHHHH
Confidence 999999 79999999999999865 3445555666666666665443
No 127
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=99.13 E-value=3.6e-10 Score=115.15 Aligned_cols=192 Identities=18% Similarity=0.230 Sum_probs=116.2
Q ss_pred CCEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhccc---CceEEe
Q 002285 601 NNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEY---NMWLAA 677 (942)
Q Consensus 601 ~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~---~l~lia 677 (942)
-.++||+|+||||++..-+| ......|.+|.+ .|..|+.+|..+...+..+-+.+ +.++|+
T Consensus 6 ~~~lIFtDlD~TLl~~~ye~---------------~pA~pv~~el~d-~G~~Vi~~SSKT~aE~~~l~~~l~v~~~p~ia 69 (274)
T COG3769 6 MPLLIFTDLDGTLLPHSYEW---------------QPAAPVLLELKD-AGVPVILCSSKTRAEMLYLQKSLGVQGLPLIA 69 (274)
T ss_pred cceEEEEcccCcccCCCCCC---------------CccchHHHHHHH-cCCeEEEeccchHHHHHHHHHhcCCCCCceee
Confidence 35799999999999964333 224566777775 69999999999999988777666 478999
Q ss_pred ecceEEEeCCCceeecc--c------CCCCh-hHHHHHHHHHHHHHhcCCCeeeee----------------------ec
Q 002285 678 ENGMFLRLTTGEWMTTM--P------ENLNM-DWVDSVKHVFEYFTERTPRSHFEV----------------------RE 726 (942)
Q Consensus 678 ehG~~ir~~~~~w~~~~--~------~~~~~-~w~~~v~~il~~~~~r~~Gs~iE~----------------------K~ 726 (942)
|||+-|..+. .|.... + ..... .-.+.+.+.++.+.+...-.++.+ ++
T Consensus 70 EnG~aI~~p~-~~~~~~~~~r~~~g~~~~elg~~l~~ire~l~kLee~~g~~~~~~~d~~ei~e~TGlpre~aaLa~~rE 148 (274)
T COG3769 70 ENGAAIYLPK-GWFPFDGKPREISGISHIELGKVLEKIREKLDKLEEHFGFTTFDDVDDEEIAEWTGLPREQAALAMLRE 148 (274)
T ss_pred cCCceEEecc-cccccCCCCceecceEeeehhhhHHHHHHHHHHHHHHhCeeEeccCCHHHHHHHhCCChHHhHHHHHHH
Confidence 9999998432 222110 0 00000 012333333333322211111110 11
Q ss_pred ceEEEEEeccchHHhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEECCCCHHHHHHHHHHHhcccCCCCCCCceEEE
Q 002285 727 TSLVWNYKYADLEFGRLQARDILQHLWSGPISNASVDVVQGGRSVEVRAVGVTKGAAIDRILGEIVRHKGLKTPIDYVLC 806 (942)
Q Consensus 727 ~sl~~hyr~ad~e~~~~qa~el~~~L~~~~~~~~~v~v~~G~~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~ 806 (942)
.+.++-.|..| +.+.++ ...+...+++++.|....-+.-....||.|++.+++.+-.- .....++.
T Consensus 149 yseti~~rs~d---------~~~~~~-~~~L~e~glt~v~garf~~v~~as~gKg~Aa~~ll~~y~rl----~~~r~t~~ 214 (274)
T COG3769 149 YSETIIWRSSD---------ERMAQF-TARLNERGLTFVHGARFWHVLDASAGKGQAANWLLETYRRL----GGARTTLG 214 (274)
T ss_pred hhhheeecccc---------hHHHHH-HHHHHhcCceEEeccceEEEeccccCccHHHHHHHHHHHhc----CceeEEEe
Confidence 11111111111 111111 22222346889999888888888888999999999977521 12345899
Q ss_pred EeCCCCCCHHHHHhcCcC
Q 002285 807 IGHFLQKDEDIYTFFEPE 824 (942)
Q Consensus 807 iGD~d~nDEdMF~~~~~~ 824 (942)
+|| +.||.+||+.+...
T Consensus 215 ~GD-g~nD~Pl~ev~d~A 231 (274)
T COG3769 215 LGD-GPNDAPLLEVMDYA 231 (274)
T ss_pred cCC-CCCcccHHHhhhhh
Confidence 999 99999999988653
No 128
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=99.09 E-value=1.8e-08 Score=116.35 Aligned_cols=261 Identities=11% Similarity=0.044 Sum_probs=151.2
Q ss_pred CCCEEEEcCCchhhHHHHHH-hhCCCCeEEEEeccCCCChhHhhcCCchHHHHHHhhhccEEeecCHHHHHHHHHHHHHH
Q 002285 242 EGDVVWCHDYHLMFLPQCLK-EYNNNMKVGWFLHTPFPSSEIHRTLPSRTELLRSVLAADLVGFHTYDYARHFVSACTRI 320 (942)
Q Consensus 242 ~~DiIwvHDyhL~llp~~Lr-~~~p~~~I~~flH~PfP~~e~fr~lp~r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~ 320 (942)
++|+|+++.. ..+...++ +...++|+. ++++-+-.. + ..+- -.+|.+...+....+.+..
T Consensus 104 kPDvVi~~~p--~~~~~~l~~~~~~~iP~~-~v~td~~~~------~--~w~~---~~~d~~~v~s~~~~~~l~~----- 164 (391)
T PRK13608 104 KPDLILLTFP--TPVMSVLTEQFNINIPVA-TVMTDYRLH------K--NWIT---PYSTRYYVATKETKQDFID----- 164 (391)
T ss_pred CcCEEEECCc--HHHHHHHHHhcCCCCCEE-EEeCCCCcc------c--cccc---CCCCEEEECCHHHHHHHHH-----
Confidence 6799988633 22333343 334466764 334443110 1 0111 2477776666554443321
Q ss_pred hccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHh---cCCc-eEEEeecccccCCHHHHHHHH
Q 002285 321 LGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERF---AGRK-VMLGVDRLDMIKGIPQKILAF 396 (942)
Q Consensus 321 l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~-iIl~VgRLd~~KGi~~lL~Af 396 (942)
.| ....+|.++++.|+.. |.+... ...+++++ ++++ ++++.||+...||+..+++++
T Consensus 165 ~g-----------i~~~ki~v~GiPv~~~-f~~~~~-------~~~~~~~~~l~~~~~~ilv~~G~lg~~k~~~~li~~~ 225 (391)
T PRK13608 165 VG-----------IDPSTVKVTGIPIDNK-FETPID-------QKQWLIDNNLDPDKQTILMSAGAFGVSKGFDTMITDI 225 (391)
T ss_pred cC-----------CCHHHEEEECeecChH-hccccc-------HHHHHHHcCCCCCCCEEEEECCCcccchhHHHHHHHH
Confidence 11 1234666666666643 432211 11233444 2444 556799999999999999985
Q ss_pred HHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEEE
Q 002285 397 EKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVALV 476 (942)
Q Consensus 397 ~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v~ 476 (942)
++..|++ .++.++ |..+ ++.+++.+.. +.. ..|++ .+++ +++..+|+.||++|.
T Consensus 226 ---~~~~~~~----~~vvv~----G~~~---~l~~~l~~~~---~~~------~~v~~-~G~~--~~~~~~~~~aDl~I~ 279 (391)
T PRK13608 226 ---LAKSANA----QVVMIC----GKSK---ELKRSLTAKF---KSN------ENVLI-LGYT--KHMNEWMASSQLMIT 279 (391)
T ss_pred ---HhcCCCc----eEEEEc----CCCH---HHHHHHHHHh---ccC------CCeEE-Eecc--chHHHHHHhhhEEEe
Confidence 2344554 344444 2222 1233333322 111 12544 3444 579999999999996
Q ss_pred CCCCCCCChhHHHHHhhccCCCceEEEeCCCCccccc-----CCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHh
Q 002285 477 TSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSL-----GAGAILVNPWNITEVASSIGYALNMPADEREKRHLHNF 551 (942)
Q Consensus 477 pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l-----g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~ 551 (942)
. +.|+++.||||| +-|+|++...+..+.. ...|.-+-+.|.++++++|.++++++ +.+.++.++++
T Consensus 280 k----~gg~tl~EA~a~----G~PvI~~~~~pgqe~~N~~~~~~~G~g~~~~~~~~l~~~i~~ll~~~-~~~~~m~~~~~ 350 (391)
T PRK13608 280 K----PGGITISEGLAR----CIPMIFLNPAPGQELENALYFEEKGFGKIADTPEEAIKIVASLTNGN-EQLTNMISTME 350 (391)
T ss_pred C----CchHHHHHHHHh----CCCEEECCCCCCcchhHHHHHHhCCcEEEeCCHHHHHHHHHHHhcCH-HHHHHHHHHHH
Confidence 3 458899999999 3567777543322211 12233333569999999999999754 56667777788
Q ss_pred HHHHhcCHHHHHHHHHHHHHHhHH
Q 002285 552 MHVTTHTSQEWAATFVSELNDTIV 575 (942)
Q Consensus 552 ~~v~~~~~~~W~~~fl~~L~~~~~ 575 (942)
+....++....++.+++.+.....
T Consensus 351 ~~~~~~s~~~i~~~l~~l~~~~~~ 374 (391)
T PRK13608 351 QDKIKYATQTICRDLLDLIGHSSQ 374 (391)
T ss_pred HhcCCCCHHHHHHHHHHHhhhhhh
Confidence 888888888888888877665433
No 129
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=99.00 E-value=4.6e-08 Score=110.55 Aligned_cols=248 Identities=13% Similarity=0.008 Sum_probs=145.4
Q ss_pred HHhhcCCCCEEEEcCCchhh--HH-HHHHh-hCCCCeEEEEeccCCCChhHhhcCC-chHHHHHHhhhccEEeecCHHHH
Q 002285 236 VNNIYEEGDVVWCHDYHLMF--LP-QCLKE-YNNNMKVGWFLHTPFPSSEIHRTLP-SRTELLRSVLAADLVGFHTYDYA 310 (942)
Q Consensus 236 i~~~~~~~DiIwvHDyhL~l--lp-~~Lr~-~~p~~~I~~flH~PfP~~e~fr~lp-~r~~il~~ll~aDlIgF~t~~~~ 310 (942)
+...++++|+|++|..-+.. ++ .++++ +..++++++++|--+|.. +.... ........+..||.|..++....
T Consensus 58 ~~~~~~~~Dvv~~~~P~~~~~~~~~~~~~~~k~~~~k~i~~ihD~~~~~--~~~~~~~~~~~~~~~~~aD~iI~~S~~~~ 135 (333)
T PRK09814 58 ILASLKPGDIVIFQFPTWNGFEFDRLFVDKLKKKQVKIIILIHDIEPLR--FDSNYYLMKEEIDMLNLADVLIVHSKKMK 135 (333)
T ss_pred HHhcCCCCCEEEEECCCCchHHHHHHHHHHHHHcCCEEEEEECCcHHHh--ccccchhhHHHHHHHHhCCEEEECCHHHH
Confidence 34457899999999864432 22 22222 112699999999876532 11111 02223344456899998887765
Q ss_pred HHHHHHHHHHhccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHhcCCceEEEeecccccCCHH
Q 002285 311 RHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERFAGRKVMLGVDRLDMIKGIP 390 (942)
Q Consensus 311 ~~Fl~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi~ 390 (942)
+.+.+ .|. ...++.++++..+...... +.....++.|+++|||....++.
T Consensus 136 ~~l~~-----~g~-----------~~~~i~~~~~~~~~~~~~~--------------~~~~~~~~~i~yaG~l~k~~~l~ 185 (333)
T PRK09814 136 DRLVE-----EGL-----------TTDKIIVQGIFDYLNDIEL--------------VKTPSFQKKINFAGNLEKSPFLK 185 (333)
T ss_pred HHHHH-----cCC-----------CcCceEecccccccccccc--------------cccccCCceEEEecChhhchHHH
Confidence 55432 121 1234444444332211100 01123456899999999443211
Q ss_pred HHHHHHHHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHH
Q 002285 391 QKILAFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAI 470 (942)
Q Consensus 391 ~lL~Af~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ 470 (942)
+..|++ .|+++ |++++.. .. ...|+| .|.++.+++..+|+.
T Consensus 186 ----------~~~~~~----~l~i~-----G~g~~~~-----------~~--------~~~V~f-~G~~~~eel~~~l~~ 226 (333)
T PRK09814 186 ----------NWSQGI----KLTVF-----GPNPEDL-----------EN--------SANISY-KGWFDPEELPNELSK 226 (333)
T ss_pred ----------hcCCCC----eEEEE-----CCCcccc-----------cc--------CCCeEE-ecCCCHHHHHHHHhc
Confidence 124554 34444 4554321 00 013554 578999999999998
Q ss_pred ccEEEECCC-----------CCCCChhHHHHHhhccCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHhC
Q 002285 471 TDVALVTSL-----------RDGMNLVSYEFVACQASKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVASSIGYALN 537 (942)
Q Consensus 471 ADv~v~pSl-----------~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l--g~~gllVnP~D~~~lA~aI~~aL~ 537 (942)
|+.+++.- .-.++--..||||| +-|||++..++.++.+ +..|++|+ +.++++++|..+
T Consensus 227 -~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~----G~PVI~~~~~~~~~~V~~~~~G~~v~--~~~el~~~l~~~-- 297 (333)
T PRK09814 227 -GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAA----GLPVIVWSKAAIADFIVENGLGFVVD--SLEELPEIIDNI-- 297 (333)
T ss_pred -CcCeEEcCCCCCccchhhhhccchHHHHHHHHC----CCCEEECCCccHHHHHHhCCceEEeC--CHHHHHHHHHhc--
Confidence 76665432 12456668899999 3589999998888888 67899998 778999999874
Q ss_pred CCHHHHHHHHHHHhHHHHhcCHHHHHH
Q 002285 538 MPADEREKRHLHNFMHVTTHTSQEWAA 564 (942)
Q Consensus 538 m~~~er~~r~~~~~~~v~~~~~~~W~~ 564 (942)
+++++.++.+++++..+....-...+
T Consensus 298 -~~~~~~~m~~n~~~~~~~~~~g~~~~ 323 (333)
T PRK09814 298 -TEEEYQEMVENVKKISKLLRNGYFTK 323 (333)
T ss_pred -CHHHHHHHHHHHHHHHHHHhcchhHH
Confidence 35666666666666654433333333
No 130
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=98.98 E-value=1.8e-09 Score=104.76 Aligned_cols=129 Identities=26% Similarity=0.312 Sum_probs=87.2
Q ss_pred CceEEEeecccccCCHHHHHH-HHHHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccE
Q 002285 374 RKVMLGVDRLDMIKGIPQKIL-AFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPI 452 (942)
Q Consensus 374 ~~iIl~VgRLd~~KGi~~lL~-Af~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV 452 (942)
..+|++.|++.+.||+..+++ |++++.+++|++ .|+++| .+++ +++++ .. ..|
T Consensus 2 ~~~i~~~g~~~~~k~~~~li~~~~~~l~~~~p~~----~l~i~G-----~~~~------~l~~~-~~----------~~v 55 (135)
T PF13692_consen 2 ILYIGYLGRIRPDKGLEELIEAALERLKEKHPDI----ELIIIG-----NGPD------ELKRL-RR----------PNV 55 (135)
T ss_dssp -EEEE--S-SSGGGTHHHHHH-HHHHHHHHSTTE----EEEEEC-----ESS-------HHCCH-HH----------CTE
T ss_pred cccccccccccccccccchhhhHHHHHHHHCcCE----EEEEEe-----CCHH------HHHHh-cC----------CCE
Confidence 357889999999999999999 999999999974 455554 3332 12222 11 135
Q ss_pred EEeCCCCCHHHHHHHHHHccEEEECCC-CCCCChhHHHHHhhccCCCceEEEeCCCCccccc--CCceEEECCCCHHHHH
Q 002285 453 HHLDRSLDFHALCALYAITDVALVTSL-RDGMNLVSYEFVACQASKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVA 529 (942)
Q Consensus 453 ~~l~~~v~~~el~aly~~ADv~v~pSl-~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l--g~~gllVnP~D~~~lA 529 (942)
++ .+.+ +++.++|+.||+++.|+. .+|++..++|||++ +.|+|+|.. |....+ ...++++ +.|.++++
T Consensus 56 ~~-~g~~--~e~~~~l~~~dv~l~p~~~~~~~~~k~~e~~~~----G~pvi~~~~-~~~~~~~~~~~~~~~-~~~~~~l~ 126 (135)
T PF13692_consen 56 RF-HGFV--EELPEILAAADVGLIPSRFNEGFPNKLLEAMAA----GKPVIASDN-GAEGIVEEDGCGVLV-ANDPEELA 126 (135)
T ss_dssp EE-E-S---HHHHHHHHC-SEEEE-BSS-SCC-HHHHHHHCT----T--EEEEHH-HCHCHS---SEEEE--TT-HHHHH
T ss_pred EE-cCCH--HHHHHHHHhCCEEEEEeeCCCcCcHHHHHHHHh----CCCEEECCc-chhhheeecCCeEEE-CCCHHHHH
Confidence 55 4556 689999999999999985 68999999999999 356888877 555544 2466777 89999999
Q ss_pred HHHHHHhC
Q 002285 530 SSIGYALN 537 (942)
Q Consensus 530 ~aI~~aL~ 537 (942)
++|.++++
T Consensus 127 ~~i~~l~~ 134 (135)
T PF13692_consen 127 EAIERLLN 134 (135)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhc
Confidence 99999875
No 131
>cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences. Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea.
Probab=98.97 E-value=8.6e-08 Score=117.67 Aligned_cols=182 Identities=15% Similarity=0.085 Sum_probs=124.3
Q ss_pred ceEEEeecccccCCHHHHHHHHHHhHH--hCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccE
Q 002285 375 KVMLGVDRLDMIKGIPQKILAFEKFLE--ENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPI 452 (942)
Q Consensus 375 ~iIl~VgRLd~~KGi~~lL~Af~~ll~--~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV 452 (942)
.+|.++.|+...||...++..++++.+ .+|+. .+.+|..|.+...+.+ -+++.+++.+++..- ++. ..|
T Consensus 479 ltigfarRfa~YKR~~Lil~dl~rl~~il~~~~~--pvQ~IfaGKAhP~d~~-gK~iIk~i~~~a~~p--~~~----~kV 549 (778)
T cd04299 479 LTIGFARRFATYKRATLLLRDPERLKRLLNDPER--PVQFIFAGKAHPADEP-GKELIQEIVEFSRRP--EFR----GRI 549 (778)
T ss_pred cEEeeeecchhhhhHHHHHHHHHHHHHHhhCCCC--CeEEEEEEecCccchH-HHHHHHHHHHHHhCc--CCC----CcE
Confidence 378899999999999999999999865 23442 3667766654434432 244566666665411 111 136
Q ss_pred EEeCCCCCHHHHHHHHHHccEEEECCC--CCCCChhHHHHHhhccCCCceEEEeCCCCccccc--CCceEEECC------
Q 002285 453 HHLDRSLDFHALCALYAITDVALVTSL--RDGMNLVSYEFVACQASKKGVLILSEFAGAAQSL--GAGAILVNP------ 522 (942)
Q Consensus 453 ~~l~~~v~~~el~aly~~ADv~v~pSl--~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l--g~~gllVnP------ 522 (942)
.|+. ..+..--..++..|||++.||+ +|.-|+.-+=||.- |++-+|..-|...+. |.+|..|.+
T Consensus 550 vfle-~Yd~~lA~~LvaG~DvwLn~prrp~EAsGTSgMKA~~N-----G~LnlSvlDGww~E~~~g~nGwaig~~~~~~~ 623 (778)
T cd04299 550 VFLE-DYDMALARHLVQGVDVWLNTPRRPLEASGTSGMKAALN-----GGLNLSVLDGWWDEGYDGENGWAIGDGDEYED 623 (778)
T ss_pred EEEc-CCCHHHHHHHHhhhhhcccCCCCCCCCCccchHHHHHc-----CCeeeecccCccccccCCCCceEeCCCccccC
Confidence 6654 4556666778999999999999 89999999999885 999999998887776 789999988
Q ss_pred ------CCHHHHHHHHHHHhC----CC-----HHHHHHHHHHHhH-HHHhcCHHHHHHHHHHHHH
Q 002285 523 ------WNITEVASSIGYALN----MP-----ADEREKRHLHNFM-HVTTHTSQEWAATFVSELN 571 (942)
Q Consensus 523 ------~D~~~lA~aI~~aL~----m~-----~~er~~r~~~~~~-~v~~~~~~~W~~~fl~~L~ 571 (942)
.|.++|-+.|.+.+- .. +.+-.++++++.. ..-.+++.+.++.+++.+.
T Consensus 624 ~~~~d~~da~~Ly~~Le~~i~p~yy~r~~~g~p~~W~~~~k~sm~~~~p~fs~~Rmv~eY~~~~Y 688 (778)
T cd04299 624 DEYQDAEEAEALYDLLENEVIPLFYDRDEGGYPPGWVAMMKHSMATLGPRFSAERMVREYVERFY 688 (778)
T ss_pred hhhcchhhHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHhcccCCCHHHHHHHHHHHhH
Confidence 455666666644332 10 2234444444332 2346788888887777665
No 132
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=98.97 E-value=8.9e-08 Score=109.65 Aligned_cols=144 Identities=19% Similarity=0.178 Sum_probs=92.5
Q ss_pred CCceE-EEee-cccccC-CHHHHHHHHHHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCc
Q 002285 373 GRKVM-LGVD-RLDMIK-GIPQKILAFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTT 449 (942)
Q Consensus 373 ~~~iI-l~Vg-RLd~~K-Gi~~lL~Af~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~ 449 (942)
++++| +..| |....| ++..+++|++.+.+++|+++ +++++ ++++. ++++++++.+.. + .
T Consensus 185 ~~~~il~~~gsr~~~~~~~~~~l~~a~~~l~~~~~~~~----~ii~~----~~~~~----~~~~~~~~~~~~---~---~ 246 (380)
T PRK00025 185 DARVLALLPGSRGQEIKRLLPPFLKAAQLLQQRYPDLR----FVLPL----VNPKR----REQIEEALAEYA---G---L 246 (380)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHhCCCeE----EEEec----CChhh----HHHHHHHHhhcC---C---C
Confidence 44543 4434 776654 47899999999988888743 44443 12232 233444433220 1 1
Q ss_pred ccEEEeCCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhccCCCceEEEe-----------------CCCCcccc
Q 002285 450 VPIHHLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLILS-----------------EFAGAAQS 512 (942)
Q Consensus 450 ~pV~~l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlS-----------------e~~G~~~~ 512 (942)
.+.++. .++..+|+.||+++++| |.+.+|+|+| +.|+|++ .+.|.++.
T Consensus 247 -~v~~~~-----~~~~~~~~~aDl~v~~s-----G~~~lEa~a~----G~PvI~~~~~~~~~~~~~~~~~~~~~~~l~~~ 311 (380)
T PRK00025 247 -EVTLLD-----GQKREAMAAADAALAAS-----GTVTLELALL----KVPMVVGYKVSPLTFWIAKRLVKVPYVSLPNL 311 (380)
T ss_pred -CeEEEc-----ccHHHHHHhCCEEEECc-----cHHHHHHHHh----CCCEEEEEccCHHHHHHHHHHHcCCeeehHHH
Confidence 133332 47899999999999998 7888999999 3567776 34444555
Q ss_pred cC----CceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHH
Q 002285 513 LG----AGAILVNPWNITEVASSIGYALNMPADEREKRHLHN 550 (942)
Q Consensus 513 lg----~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~ 550 (942)
+. ..+++.+..|.++++++|..+|+++ +.++++.+++
T Consensus 312 ~~~~~~~~~~~~~~~~~~~l~~~i~~ll~~~-~~~~~~~~~~ 352 (380)
T PRK00025 312 LAGRELVPELLQEEATPEKLARALLPLLADG-ARRQALLEGF 352 (380)
T ss_pred hcCCCcchhhcCCCCCHHHHHHHHHHHhcCH-HHHHHHHHHH
Confidence 52 2346778889999999999999864 3454444443
No 133
>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3. Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D.
Probab=98.95 E-value=2.7e-07 Score=108.09 Aligned_cols=107 Identities=9% Similarity=0.037 Sum_probs=71.9
Q ss_pred HHHHHHHHccEEEECCCCCCCChhHHHHHhhccCCCceEEEeCCCCccccc-------CCceEEE-CC--CC----HHHH
Q 002285 463 ALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSL-------GAGAILV-NP--WN----ITEV 528 (942)
Q Consensus 463 el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l-------g~~gllV-nP--~D----~~~l 528 (942)
++..+.+.+|+.|+||.||.+|.+++|+.|. +-|.|.|+.+|....+ ...|+.| +- .+ ++++
T Consensus 462 ~Y~dfv~GcdLgvFPSYYEPWGYTPlE~~a~----gVPsITTnLsGFG~~~~~~~~~~~~~GV~VvdR~~~n~~e~v~~l 537 (633)
T PF05693_consen 462 DYYDFVRGCDLGVFPSYYEPWGYTPLECTAF----GVPSITTNLSGFGCWMQEHIEDPEEYGVYVVDRRDKNYDESVNQL 537 (633)
T ss_dssp -HHHHHHHSSEEEE--SSBSS-HHHHHHHHT----T--EEEETTBHHHHHHHTTS-HHGGGTEEEE-SSSS-HHHHHHHH
T ss_pred CHHHHhccCceeeeccccccccCChHHHhhc----CCceeeccchhHHHHHHHhhccCcCCcEEEEeCCCCCHHHHHHHH
Confidence 6788899999999999999999999999998 3478999999877544 1356654 32 22 4667
Q ss_pred HHHHHHHhCCCHHHHHHHHHHHhHHHHhcCHHHHHHHHHHHHHHh
Q 002285 529 ASSIGYALNMPADEREKRHLHNFMHVTTHTSQEWAATFVSELNDT 573 (942)
Q Consensus 529 A~aI~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~L~~~ 573 (942)
++.|.....++..+|.....+..+.....++.+...-+.+.-..+
T Consensus 538 a~~l~~f~~~~~rqri~~Rn~ae~LS~~~dW~~~~~yY~~Ay~~A 582 (633)
T PF05693_consen 538 ADFLYKFCQLSRRQRIIQRNRAERLSDLADWKNFGKYYEKAYDLA 582 (633)
T ss_dssp HHHHHHHHT--HHHHHHHHHHHHHHGGGGBHHHHCHHHHHHHHHH
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 777777788988777776666666666777777666665544433
No 134
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=98.46 E-value=4.3e-07 Score=86.83 Aligned_cols=62 Identities=19% Similarity=0.245 Sum_probs=48.1
Q ss_pred EEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccC
Q 002285 604 LLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYN 672 (942)
Q Consensus 604 Li~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~ 672 (942)
+++||+||||++...... ......+.+++.+.|++|.+ .|..++|+|||....+..++...+
T Consensus 1 ~~vfD~D~tl~~~~~~~~------~~~~~~~~~~~~~~l~~l~~-~g~~i~ivS~~~~~~~~~~~~~~~ 62 (139)
T cd01427 1 AVLFDLDGTLLDSEPGIA------EIEELELYPGVKEALKELKE-KGIKLALATNKSRREVLELLEELG 62 (139)
T ss_pred CeEEccCCceEccCcccc------ccccCCcCcCHHHHHHHHHH-CCCeEEEEeCchHHHHHHHHHHcC
Confidence 479999999998732100 00134678999999999997 489999999999999998887754
No 135
>PF03332 PMM: Eukaryotic phosphomannomutase; InterPro: IPR005002 This enzyme (5.4.2.8 from EC) is involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.; GO: 0004615 phosphomannomutase activity, 0019307 mannose biosynthetic process, 0005737 cytoplasm; PDB: 2I55_B 2I54_C 3F9R_A 2FUE_A 2FUC_A 2AMY_A 2Q4R_A.
Probab=98.41 E-value=1.1e-06 Score=91.39 Aligned_cols=172 Identities=18% Similarity=0.251 Sum_probs=103.4
Q ss_pred HHHHHHHhhhCCCCeEEEEcCCChhhHHHhhc-cc----CceEEeecceEEEeCCC-ceeecccCCCChhHHHHHHHHHH
Q 002285 638 LKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFG-EY----NMWLAAENGMFLRLTTG-EWMTTMPENLNMDWVDSVKHVFE 711 (942)
Q Consensus 638 ~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~-~~----~l~liaehG~~ir~~~~-~w~~~~~~~~~~~w~~~v~~il~ 711 (942)
+.+.|++|.+ ...|+||||-++..+.+.+. .- -.++-++||...+..++ .|...+.+....+-++.+.+.+.
T Consensus 1 M~~~L~~L~~--~~~vgvVgGsd~~k~~eQl~~~~~~~~fdy~f~enG~~~y~~~~~~~~~~~~~~lgee~~~~~in~~l 78 (220)
T PF03332_consen 1 MAELLQKLRK--KVPVGVVGGSDLPKIQEQLGGDDVLDNFDYVFPENGLVAYKNGELIWSQSIAEFLGEEKLQKLINFCL 78 (220)
T ss_dssp HHHHHHHHHT--TSEEEEEESS-HHHHHHHHSTTTHHHH-SEEEEGGGTEEEETTEEEEE--HHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHh--cCeEEEEcchhHHHHHHHHcccchHhhCCeeecCCCCeEEECCCchhhHhHHHHcCHHHHHHHHHHHH
Confidence 4678999986 79999999999999998884 32 24799999998875443 45433211111111222222222
Q ss_pred HHHhc-----CCCeeeeeecceEEEEE--eccchH----HhH----HH-HHHHHHHHhcCCCCCCCeEEEE-cCcEEEEE
Q 002285 712 YFTER-----TPRSHFEVRETSLVWNY--KYADLE----FGR----LQ-ARDILQHLWSGPISNASVDVVQ-GGRSVEVR 774 (942)
Q Consensus 712 ~~~~r-----~~Gs~iE~K~~sl~~hy--r~ad~e----~~~----~q-a~el~~~L~~~~~~~~~v~v~~-G~~~vEV~ 774 (942)
.|... ..|.+||.+...+.+.- |+|+.+ |.. .. -+.+.+.| ...+...++++.. |.-+++|.
T Consensus 79 ~~~~~l~lp~krGtfIE~R~gmIn~SpiGr~a~~eer~~f~~~D~~~~iR~~~v~~L-~~~f~d~~L~~siGGqiSiDvf 157 (220)
T PF03332_consen 79 RYISDLDLPVKRGTFIEFRGGMINFSPIGRNASQEERDEFDEYDKKHKIREKLVEAL-KKEFPDFGLTFSIGGQISIDVF 157 (220)
T ss_dssp HHHHT---S---S-SEEEESSEEEE-SS-TTS-HHHHHHHHHHHHHHTHHHHHHHHH-HHHTCCCSEEEEEETTTEEEEE
T ss_pred HHHHhCCCCccCCCceeecCCcEEECcccCcCCHHHHHhhhhcChhhhHHHHHHHHH-HHHCCCCceEEecCCceEEccc
Confidence 22221 34889999999988763 333211 110 00 12344455 3333455677655 57899999
Q ss_pred ECCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeC---CCCCCHHHHHhc
Q 002285 775 AVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGH---FLQKDEDIYTFF 821 (942)
Q Consensus 775 p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD---~d~nDEdMF~~~ 821 (942)
|+||+|.-++++|.+. ..+.++|||| -+.||-++|...
T Consensus 158 p~GwDKty~Lr~l~~~---------~~~~I~FfGDkt~pGGNDyei~~~~ 198 (220)
T PF03332_consen 158 PKGWDKTYCLRHLEDE---------GFDEIHFFGDKTFPGGNDYEIFEDP 198 (220)
T ss_dssp ETT-SGGGGGGGTTTT---------T-SEEEEEESS-STTSTTHHHHHST
T ss_pred cCCccHHHHHHHHHhc---------ccceEEEEehhccCCCCCceeeecC
Confidence 9999999999987553 2688999999 235788888653
No 136
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=98.40 E-value=1.7e-06 Score=78.70 Aligned_cols=87 Identities=29% Similarity=0.405 Sum_probs=71.7
Q ss_pred EEEECCCCCCCChhHHHHHhhccCCCceEEEe-CCCCccccc--CCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHH
Q 002285 473 VALVTSLRDGMNLVSYEFVACQASKKGVLILS-EFAGAAQSL--GAGAILVNPWNITEVASSIGYALNMPADEREKRHLH 549 (942)
Q Consensus 473 v~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlS-e~~G~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~ 549 (942)
|++.|+..+|+++..+|+||| |.++++ ...+....+ |..++.++ |+++++++|..+|++ +++|++..++
T Consensus 1 i~Ln~~~~~~~~~r~~E~~a~-----G~~vi~~~~~~~~~~~~~~~~~~~~~--~~~el~~~i~~ll~~-~~~~~~ia~~ 72 (92)
T PF13524_consen 1 INLNPSRSDGPNMRIFEAMAC-----GTPVISDDSPGLREIFEDGEHIITYN--DPEELAEKIEYLLEN-PEERRRIAKN 72 (92)
T ss_pred CEeeCCCCCCCchHHHHHHHC-----CCeEEECChHHHHHHcCCCCeEEEEC--CHHHHHHHHHHHHCC-HHHHHHHHHH
Confidence 467788899999999999999 554444 455777767 56788888 999999999999985 5688888888
Q ss_pred HhHHHH-hcCHHHHHHHHH
Q 002285 550 NFMHVT-THTSQEWAATFV 567 (942)
Q Consensus 550 ~~~~v~-~~~~~~W~~~fl 567 (942)
++++|. .|++.+-+++||
T Consensus 73 a~~~v~~~~t~~~~~~~il 91 (92)
T PF13524_consen 73 ARERVLKRHTWEHRAEQIL 91 (92)
T ss_pred HHHHHHHhCCHHHHHHHHH
Confidence 998886 889888888776
No 137
>TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
Probab=98.36 E-value=0.00012 Score=84.59 Aligned_cols=135 Identities=16% Similarity=0.139 Sum_probs=82.7
Q ss_pred CCceEEEe--ecccc-cCCHHHHHHHHHHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCc
Q 002285 373 GRKVMLGV--DRLDM-IKGIPQKILAFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTT 449 (942)
Q Consensus 373 ~~~iIl~V--gRLd~-~KGi~~lL~Af~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~ 449 (942)
++++|+.+ +|..+ .|+++.+++|++.+.+.+|+++ ++..+. ++... +.++++....+. +
T Consensus 190 ~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~~p~~~----~vi~~~----~~~~~----~~~~~~~~~~~~-----~- 251 (385)
T TIGR00215 190 NGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQEPDLR----RVLPVV----NFKRR----LQFEQIKAEYGP-----D- 251 (385)
T ss_pred CCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHhCCCeE----EEEEeC----CchhH----HHHHHHHHHhCC-----C-
Confidence 55655433 59888 7999999999999998888854 332222 22211 122233222211 1
Q ss_pred ccEEEeCCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhccCCCceEEEeC-----------------CCCcccc
Q 002285 450 VPIHHLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSE-----------------FAGAAQS 512 (942)
Q Consensus 450 ~pV~~l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe-----------------~~G~~~~ 512 (942)
..|.++.+ +...+|++||++|.+| |.+.+|+|+| +-|+|++. +.+.+..
T Consensus 252 ~~v~~~~~-----~~~~~l~aADl~V~~S-----Gt~tlEa~a~----G~P~Vv~yk~~pl~~~~~~~~~~~~~~~~~ni 317 (385)
T TIGR00215 252 LQLHLIDG-----DARKAMFAADAALLAS-----GTAALEAALI----KTPMVVGYRMKPLTFLIARRLVKTDYISLPNI 317 (385)
T ss_pred CcEEEECc-----hHHHHHHhCCEEeecC-----CHHHHHHHHc----CCCEEEEEcCCHHHHHHHHHHHcCCeeeccHH
Confidence 12444432 4567999999999999 7778899999 34666662 2222222
Q ss_pred c-CCceE--EE-CCCCHHHHHHHHHHHhCCC
Q 002285 513 L-GAGAI--LV-NPWNITEVASSIGYALNMP 539 (942)
Q Consensus 513 l-g~~gl--lV-nP~D~~~lA~aI~~aL~m~ 539 (942)
+ +..++ ++ .-.+++.+++++.++|+++
T Consensus 318 l~~~~~~pel~q~~~~~~~l~~~~~~ll~~~ 348 (385)
T TIGR00215 318 LANRLLVPELLQEECTPHPLAIALLLLLENG 348 (385)
T ss_pred hcCCccchhhcCCCCCHHHHHHHHHHHhcCC
Confidence 2 22221 11 3356889999999999876
No 138
>KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism]
Probab=98.32 E-value=1.2e-05 Score=81.45 Aligned_cols=184 Identities=17% Similarity=0.283 Sum_probs=118.8
Q ss_pred hhcccCCEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhccc--C-
Q 002285 596 SYLQSNNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEY--N- 672 (942)
Q Consensus 596 ~y~~s~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~--~- 672 (942)
++++-..-|+.||.||||++. ...++|++.+.|++|.. ..++-+|-|.+++-+.+.++.- +
T Consensus 5 a~~r~~~~l~lfdvdgtLt~~--------------r~~~~~e~~~~l~~lr~--~v~ig~VggsDl~k~~eqlG~~Vl~~ 68 (252)
T KOG3189|consen 5 AAARDEETLCLFDVDGTLTPP--------------RQKVTPEMLEFLQKLRK--KVTIGFVGGSDLSKQQEQLGDNVLEE 68 (252)
T ss_pred hhhcCCceEEEEecCCccccc--------------cccCCHHHHHHHHHHhh--heEEEEeecHHHHHHHHHhchhHHhh
Confidence 345556679999999999986 45789999999999875 7899999999998888777543 2
Q ss_pred -ceEEeecceEEEeCCCceeecccCCCChhHH--HHHHHHH----HHHHhc----CCCeeeeeecceEEEEE--eccchH
Q 002285 673 -MWLAAENGMFLRLTTGEWMTTMPENLNMDWV--DSVKHVF----EYFTER----TPRSHFEVRETSLVWNY--KYADLE 739 (942)
Q Consensus 673 -l~liaehG~~ir~~~~~w~~~~~~~~~~~w~--~~v~~il----~~~~~r----~~Gs~iE~K~~sl~~hy--r~ad~e 739 (942)
.+.-+|||..-...+...- ...-..|. +.+++++ .+..+- ..|.+||-+...+.+.- |++..|
T Consensus 69 fDY~F~ENGl~~yk~gk~~~----~Qsi~~~LGee~~q~liNF~LrYlsdidlPiKRGtFiEFRNgMiNvsPIGR~cs~E 144 (252)
T KOG3189|consen 69 FDYVFSENGLVAYKGGKLLS----KQSIINHLGEEKLQELINFCLRYLSDIDLPIKRGTFIEFRNGMINVSPIGRNCSQE 144 (252)
T ss_pred hcccccCCCeeEeeCCcchh----HHHHHHHHhHHHHHHHHHHHHHHHHhcCCcccccceEEecCCceeccccccccCHH
Confidence 4788999998765443211 00111222 2223332 222221 34888988776665442 333221
Q ss_pred ----HhH-----HHHHHHHHHHhcCCCCCCCeEEEE-cCcEEEEEECCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeC
Q 002285 740 ----FGR-----LQARDILQHLWSGPISNASVDVVQ-GGRSVEVRAVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGH 809 (942)
Q Consensus 740 ----~~~-----~qa~el~~~L~~~~~~~~~v~v~~-G~~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD 809 (942)
|.. ..-..+.+.| ++-+...++...- |.-.++|-|.||+|--.++++-+. + .+.+-+|||
T Consensus 145 ER~eF~e~Dkk~~iR~K~v~~L-r~~F~~~gLtFSIGGQISfDvFP~GWDKtyCLqhle~d-g--------f~~IhFFGD 214 (252)
T KOG3189|consen 145 ERNEFEELDKKHKIREKFVEAL-REEFADYGLTFSIGGQISFDVFPKGWDKTYCLQHLEKD-G--------FDTIHFFGD 214 (252)
T ss_pred HHHHHHHhhhhhhhHHHHHHHH-HHHhcccCeeEEECCeEEEeecCCCcchhHHHHHhhhc-C--------CceEEEecc
Confidence 211 1112344445 3334556777544 567899999999999998877554 3 678999999
No 139
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=98.24 E-value=0.00047 Score=78.34 Aligned_cols=174 Identities=21% Similarity=0.287 Sum_probs=114.9
Q ss_pred hhhHHHHHHHHHHhcC-CceEEEeecccccCCHHHHHHHHHHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHH
Q 002285 358 PQVQDHINELKERFAG-RKVMLGVDRLDMIKGIPQKILAFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEI 436 (942)
Q Consensus 358 ~~~~~~~~~lr~~~~~-~~iIl~VgRLd~~KGi~~lL~Af~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~l 436 (942)
+........+|.++++ +++++..+. ...--...++++..+++++|+.. ||.| | ..||. -..++++
T Consensus 214 ~~~~~~~~~~r~~l~~~r~v~iaaST--H~GEeei~l~~~~~l~~~~~~~l----lIlV--P---RHpER---f~~v~~l 279 (419)
T COG1519 214 PQLAAELAALRRQLGGHRPVWVAAST--HEGEEEIILDAHQALKKQFPNLL----LILV--P---RHPER---FKAVENL 279 (419)
T ss_pred hhhHHHHHHHHHhcCCCCceEEEecC--CCchHHHHHHHHHHHHhhCCCce----EEEe--c---CChhh---HHHHHHH
Confidence 3445567788888877 888888776 33334458899999999999853 3322 3 34543 4567777
Q ss_pred HHhhccccCCcC-------cccEEEeCCCCCHHHHHHHHHHccEEEECCCC---CCCChhHHHHHhhccCCCceEEEeC-
Q 002285 437 VGRINGRYGTLT-------TVPIHHLDRSLDFHALCALYAITDVALVTSLR---DGMNLVSYEFVACQASKKGVLILSE- 505 (942)
Q Consensus 437 v~~IN~~~~~~~-------~~pV~~l~~~v~~~el~aly~~ADv~v~pSl~---EG~~Lv~lEamA~~~~~~G~lIlSe- 505 (942)
+.+.+-++..-. -.+|. +.. +.-||..+|+.|||+++--.. -|.| ++|+.++ +.|+|.-.
T Consensus 280 ~~~~gl~~~~rS~~~~~~~~tdV~-l~D--tmGEL~l~y~~adiAFVGGSlv~~GGHN--~LEpa~~----~~pvi~Gp~ 350 (419)
T COG1519 280 LKRKGLSVTRRSQGDPPFSDTDVL-LGD--TMGELGLLYGIADIAFVGGSLVPIGGHN--PLEPAAF----GTPVIFGPY 350 (419)
T ss_pred HHHcCCeEEeecCCCCCCCCCcEE-EEe--cHhHHHHHHhhccEEEECCcccCCCCCC--hhhHHHc----CCCEEeCCc
Confidence 777766654311 12343 222 256999999999999885433 4566 7899998 23455433
Q ss_pred ---CCCccccc--CCceEEECCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhHHHHhc
Q 002285 506 ---FAGAAQSL--GAGAILVNPWNITEVASSIGYALNMPADEREKRHLHNFMHVTTH 557 (942)
Q Consensus 506 ---~~G~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~ 557 (942)
|.-+++.+ ..+|+.|+ |.+.+++++..++++ +++|.++.++....+.++
T Consensus 351 ~~Nf~ei~~~l~~~ga~~~v~--~~~~l~~~v~~l~~~-~~~r~~~~~~~~~~v~~~ 404 (419)
T COG1519 351 TFNFSDIAERLLQAGAGLQVE--DADLLAKAVELLLAD-EDKREAYGRAGLEFLAQN 404 (419)
T ss_pred cccHHHHHHHHHhcCCeEEEC--CHHHHHHHHHHhcCC-HHHHHHHHHHHHHHHHHh
Confidence 33444444 24567776 478888888887775 778888888888888665
No 140
>TIGR02919 accessory Sec system glycosyltransferase GtfB. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus.
Probab=98.17 E-value=0.00026 Score=82.85 Aligned_cols=121 Identities=17% Similarity=0.270 Sum_probs=90.6
Q ss_pred HHHHHHHHHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHH
Q 002285 390 PQKILAFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYA 469 (942)
Q Consensus 390 ~~lL~Af~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~ 469 (942)
...|+|++.+.+..|++. +-+ |.++ + ...+|.++ .+ +. .|+.+.+ +...++..+|.
T Consensus 291 s~~I~~i~~Lv~~lPd~~--f~I---ga~t--e------~s~kL~~L-~~----y~-----nvvly~~-~~~~~l~~ly~ 346 (438)
T TIGR02919 291 SDQIEHLEEIVQALPDYH--FHI---AALT--E------MSSKLMSL-DK----YD-----NVKLYPN-ITTQKIQELYQ 346 (438)
T ss_pred HHHHHHHHHHHHhCCCcE--EEE---EecC--c------ccHHHHHH-Hh----cC-----CcEEECC-cChHHHHHHHH
Confidence 999999999999999975 433 3332 2 11334444 22 11 2444444 44567899999
Q ss_pred HccEEEECCCCCCCChhHHHHHhhccCCCceEEEe-C-CCCcccccCCceEEECCCCHHHHHHHHHHHhCCCH
Q 002285 470 ITDVALVTSLRDGMNLVSYEFVACQASKKGVLILS-E-FAGAAQSLGAGAILVNPWNITEVASSIGYALNMPA 540 (942)
Q Consensus 470 ~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlS-e-~~G~~~~lg~~gllVnP~D~~~lA~aI~~aL~m~~ 540 (942)
.||+++.+|..||+++++.||+.. |.+|+| + ..|..+.+ ..|.+|++.|+++++++|.++|+++.
T Consensus 347 ~~dlyLdin~~e~~~~al~eA~~~-----G~pI~afd~t~~~~~~i-~~g~l~~~~~~~~m~~~i~~lL~d~~ 413 (438)
T TIGR02919 347 TCDIYLDINHGNEILNAVRRAFEY-----NLLILGFEETAHNRDFI-ASENIFEHNEVDQLISKLKDLLNDPN 413 (438)
T ss_pred hccEEEEccccccHHHHHHHHHHc-----CCcEEEEecccCCcccc-cCCceecCCCHHHHHHHHHHHhcCHH
Confidence 999999999999999999999996 776666 3 34655555 56999999999999999999998764
No 141
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=98.06 E-value=6.8e-06 Score=82.88 Aligned_cols=77 Identities=12% Similarity=0.110 Sum_probs=53.3
Q ss_pred EEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHH---Hhhcc-------cC-
Q 002285 604 LLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLD---DNFGE-------YN- 672 (942)
Q Consensus 604 Li~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~---~~~~~-------~~- 672 (942)
++++|+||||+..... ++...-+ ....+++.+.+++++|.+ .|+.|+++|||+..... +++.. ++
T Consensus 1 iVisDIDGTL~~sd~~-~~~~~~~--~~~~~~~~~~~a~~~l~~-~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~ 76 (157)
T smart00775 1 IVISDIDGTITKSDVL-GHVVPII--GKDWTHPGVAKLYRDIQN-NGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPH 76 (157)
T ss_pred CEEEecCCCCcccccc-ccccccc--ccCcCCHHHHHHHHHHHH-cCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCC
Confidence 4899999999976210 0000000 013679999999999997 69999999999998874 66655 21
Q ss_pred ceEEeecceEEE
Q 002285 673 MWLAAENGMFLR 684 (942)
Q Consensus 673 l~liaehG~~ir 684 (942)
.++++.||+.+.
T Consensus 77 g~li~~~g~~~~ 88 (157)
T smart00775 77 GPVLLSPDRLFA 88 (157)
T ss_pred ceEEEcCCcchh
Confidence 366777776653
No 142
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=98.04 E-value=1.7e-05 Score=79.64 Aligned_cols=38 Identities=21% Similarity=0.110 Sum_probs=33.0
Q ss_pred CHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCc
Q 002285 779 TKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 779 nKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
+|..++++++++++ .+++.++++|| ..||.+|++.++.
T Consensus 76 ~k~~~~~~~~~~~~------~~~~~~~~vGD-s~~D~~~~~~ag~ 113 (154)
T TIGR01670 76 NKLIAFSDILEKLA------LAPENVAYIGD-DLIDWPVMEKVGL 113 (154)
T ss_pred chHHHHHHHHHHcC------CCHHHEEEECC-CHHHHHHHHHCCC
Confidence 47888889999887 46788999999 9999999998865
No 143
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=97.94 E-value=1.7e-05 Score=82.01 Aligned_cols=37 Identities=19% Similarity=0.101 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCc
Q 002285 780 KGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 780 KG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
|..+++.++++++ .+++.+++||| +.+|.+|++.++-
T Consensus 97 k~~~l~~~~~~~g------l~~~ev~~VGD-s~~D~~~a~~aG~ 133 (183)
T PRK09484 97 KLIAFSDLLEKLA------IAPEQVAYIGD-DLIDWPVMEKVGL 133 (183)
T ss_pred HHHHHHHHHHHhC------CCHHHEEEECC-CHHHHHHHHHCCC
Confidence 5678888999887 56789999999 9999999999975
No 144
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=97.84 E-value=3e-05 Score=75.05 Aligned_cols=54 Identities=13% Similarity=0.072 Sum_probs=41.4
Q ss_pred EEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHH
Q 002285 603 RLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLD 665 (942)
Q Consensus 603 rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~ 665 (942)
|+|++|+||||+.....|- ....+.++++++|++|.+ .|+.|+++|||+.....
T Consensus 2 K~i~~DiDGTL~~~~~~~y--------~~~~~~~~~ie~L~~l~~-~G~~IiiaTGR~~~~~~ 55 (126)
T TIGR01689 2 KRLVMDLDNTITLTENGDY--------ANVAPILAVIEKLRHYKA-LGFEIVISSSRNMRTYE 55 (126)
T ss_pred CEEEEeCCCCcccCCCCcc--------cccccCHHHHHHHHHHHH-CCCEEEEECCCCchhhh
Confidence 5899999999986521110 124578999999999976 69999999999987543
No 145
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=97.63 E-value=1.9e-05 Score=88.69 Aligned_cols=40 Identities=18% Similarity=0.193 Sum_probs=36.4
Q ss_pred CCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCc
Q 002285 777 GVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 777 gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
+-.|+.++++++++++ ++++.+++||| +.||.+|++.++.
T Consensus 246 ~k~K~~~L~~la~~lg------i~~~qtIaVGD-g~NDl~m~~~AGl 285 (322)
T PRK11133 246 AQYKADTLTRLAQEYE------IPLAQTVAIGD-GANDLPMIKAAGL 285 (322)
T ss_pred cccHHHHHHHHHHHcC------CChhhEEEEEC-CHHHHHHHHHCCC
Confidence 3589999999999998 67899999999 9999999999986
No 146
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=97.61 E-value=0.00013 Score=79.78 Aligned_cols=71 Identities=14% Similarity=0.233 Sum_probs=56.5
Q ss_pred CCEEEEEecCCccCCCCCccCCCCCccccCCCCC-ChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccCc----eE
Q 002285 601 NNRLLILGFNATLTAPVDFLGRRGGQIREMEPKL-HPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYNM----WL 675 (942)
Q Consensus 601 ~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~-~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l----~l 675 (942)
..++|+||+||||++.. ...++ +|.+.++|.+|.+ .|..++|+|+++...+...+..+++ ..
T Consensus 125 ~~kvIvFDLDgTLi~~~------------~~v~irdPgV~EaL~~Lke-kGikLaIaTS~~Re~v~~~L~~lGLd~YFdv 191 (301)
T TIGR01684 125 PPHVVVFDLDSTLITDE------------EPVRIRDPRIYDSLTELKK-RGCILVLWSYGDRDHVVESMRKVKLDRYFDI 191 (301)
T ss_pred cceEEEEecCCCCcCCC------------CccccCCHHHHHHHHHHHH-CCCEEEEEECCCHHHHHHHHHHcCCCcccCE
Confidence 45799999999999872 12334 4999999999998 6999999999999999888887754 25
Q ss_pred EeecceEEE
Q 002285 676 AAENGMFLR 684 (942)
Q Consensus 676 iaehG~~ir 684 (942)
|..+|...+
T Consensus 192 IIs~Gdv~~ 200 (301)
T TIGR01684 192 IISGGHKAE 200 (301)
T ss_pred EEECCcccc
Confidence 666776654
No 147
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=97.42 E-value=0.00057 Score=74.22 Aligned_cols=64 Identities=5% Similarity=0.169 Sum_probs=50.3
Q ss_pred EEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcC---CChhhHHHhhcccCc-----e
Q 002285 603 RLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSG---SDRNVLDDNFGEYNM-----W 674 (942)
Q Consensus 603 rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSG---R~~~~L~~~~~~~~l-----~ 674 (942)
++|+||+||||... ...+ +.+.++|++|.+ .|..|+++|| |+...+.+.+..+++ .
T Consensus 2 ~~~~~D~DGtl~~~--------------~~~i-~~a~~~l~~l~~-~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~~~~~ 65 (249)
T TIGR01457 2 KGYLIDLDGTMYKG--------------KERI-PEAETFVHELQK-RDIPYLFVTNNSTRTPESVAEMLASFDIPATLET 65 (249)
T ss_pred CEEEEeCCCceEcC--------------CeeC-cCHHHHHHHHHH-CCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhh
Confidence 68999999999975 2223 478999999997 6999999995 999999888887643 2
Q ss_pred EEeecceE
Q 002285 675 LAAENGMF 682 (942)
Q Consensus 675 liaehG~~ 682 (942)
++..+|+.
T Consensus 66 iit~~~~~ 73 (249)
T TIGR01457 66 VFTASMAT 73 (249)
T ss_pred EeeHHHHH
Confidence 66666664
No 148
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=97.42 E-value=0.00088 Score=70.99 Aligned_cols=46 Identities=17% Similarity=0.192 Sum_probs=39.0
Q ss_pred EEEEECCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCc
Q 002285 771 VEVRAVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 771 vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
+-....+-.|..+++.+++.+| ++.+.++++|| +.||.+||+.++.
T Consensus 136 ~g~~~~~~~K~~~l~~~~~~~g------~~~~~~~a~gD-s~nDlpml~~ag~ 181 (212)
T COG0560 136 VGPICDGEGKAKALRELAAELG------IPLEETVAYGD-SANDLPMLEAAGL 181 (212)
T ss_pred eeeecCcchHHHHHHHHHHHcC------CCHHHeEEEcC-chhhHHHHHhCCC
Confidence 3334445689999999999988 56789999999 9999999999986
No 149
>KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=97.22 E-value=0.0092 Score=65.88 Aligned_cols=166 Identities=14% Similarity=0.213 Sum_probs=110.4
Q ss_pred CCceEEEeecccccCCHHHHHHHHHHhHHhC----CCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcC
Q 002285 373 GRKVMLGVDRLDMIKGIPQKILAFEKFLEEN----PSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLT 448 (942)
Q Consensus 373 ~~~iIl~VgRLd~~KGi~~lL~Af~~ll~~~----P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~ 448 (942)
...++++--.+.+...+.-+++|+..+-++. -++- +++ ++|. |.||..+.+.++|++. +
T Consensus 254 ~pallvsSTswTpDEdf~ILL~AL~~y~~~~~~~~~~lP-~ll-ciIT----GKGPlkE~Y~~~I~~~-----------~ 316 (444)
T KOG2941|consen 254 RPALLVSSTSWTPDEDFGILLEALVIYEEQLYDKTHNLP-SLL-CIIT----GKGPLKEKYSQEIHEK-----------N 316 (444)
T ss_pred CCeEEEecCCCCCcccHHHHHHHHHhhhhhhhhccCCCC-cEE-EEEc----CCCchhHHHHHHHHHh-----------c
Confidence 3567888889999999999999998552211 1111 232 3333 5678666666666654 3
Q ss_pred cccEEEeCCCCCHHHHHHHHHHccEEE--ECCCCCC--CChhHHHHHhhccCCCc-eEEEeCCCCccccc--CCceEEEC
Q 002285 449 TVPIHHLDRSLDFHALCALYAITDVAL--VTSLRDG--MNLVSYEFVACQASKKG-VLILSEFAGAAQSL--GAGAILVN 521 (942)
Q Consensus 449 ~~pV~~l~~~v~~~el~aly~~ADv~v--~pSl~EG--~~Lv~lEamA~~~~~~G-~lIlSe~~G~~~~l--g~~gllVn 521 (942)
|+.|.+..-.+.-++.+.++..||..| .||. -| +++-+....-| | |+++-.|.-..|.+ |.||++++
T Consensus 317 ~~~v~~~tpWL~aEDYP~ll~saDlGVcLHtSS-SGLDLPMKVVDMFGc-----glPvcA~~fkcl~ELVkh~eNGlvF~ 390 (444)
T KOG2941|consen 317 LQHVQVCTPWLEAEDYPKLLASADLGVCLHTSS-SGLDLPMKVVDMFGC-----GLPVCAVNFKCLDELVKHGENGLVFE 390 (444)
T ss_pred ccceeeeecccccccchhHhhccccceEeeecC-cccCcchhHHHhhcC-----CCceeeecchhHHHHHhcCCCceEec
Confidence 456777788888999999999999765 4554 34 56667777777 5 46666776555555 89999997
Q ss_pred CCCHHHHHHHHHHHhCC---CHHHHHHHHHHHhHHHHhcCHHHHHHHHH
Q 002285 522 PWNITEVASSIGYALNM---PADEREKRHLHNFMHVTTHTSQEWAATFV 567 (942)
Q Consensus 522 P~D~~~lA~aI~~aL~m---~~~er~~r~~~~~~~v~~~~~~~W~~~fl 567 (942)
|.+++|+.|..+++. +..+-. +.++.+.+....+|.+...
T Consensus 391 --Ds~eLa~ql~~lf~~fp~~a~~l~----~lkkn~~e~~e~RW~~~W~ 433 (444)
T KOG2941|consen 391 --DSEELAEQLQMLFKNFPDNADELN----QLKKNLREEQELRWDESWE 433 (444)
T ss_pred --cHHHHHHHHHHHHhcCCCCHHHHH----HHHHhhHHHHhhhHHHHHH
Confidence 999999999999873 223322 2223333444566665543
No 150
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=97.17 E-value=0.00084 Score=73.54 Aligned_cols=71 Identities=14% Similarity=0.199 Sum_probs=54.0
Q ss_pred CCEEEEEecCCccCCCCCccCCCCCccccCCCCC-ChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccCc----eE
Q 002285 601 NNRLLILGFNATLTAPVDFLGRRGGQIREMEPKL-HPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYNM----WL 675 (942)
Q Consensus 601 ~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~-~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l----~l 675 (942)
..++|+||+||||+.... ..++ +|.+.++|.+|.+ .|..++|+|+.+...+...+..+++ ..
T Consensus 127 ~~~~i~~D~D~TL~~~~~------------~v~irdp~V~EtL~eLke-kGikLaIvTNg~Re~v~~~Le~lgL~~yFDv 193 (303)
T PHA03398 127 IPHVIVFDLDSTLITDEE------------PVRIRDPFVYDSLDELKE-RGCVLVLWSYGNREHVVHSLKETKLEGYFDI 193 (303)
T ss_pred eccEEEEecCCCccCCCC------------ccccCChhHHHHHHHHHH-CCCEEEEEcCCChHHHHHHHHHcCCCccccE
Confidence 357999999999998721 2223 5899999999997 6999999998888888888877643 24
Q ss_pred EeecceEEE
Q 002285 676 AAENGMFLR 684 (942)
Q Consensus 676 iaehG~~ir 684 (942)
+..+|....
T Consensus 194 II~~g~i~~ 202 (303)
T PHA03398 194 IICGGRKAG 202 (303)
T ss_pred EEECCCccc
Confidence 555665443
No 151
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=97.02 E-value=0.0017 Score=66.36 Aligned_cols=65 Identities=11% Similarity=0.027 Sum_probs=40.7
Q ss_pred CEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhccc
Q 002285 602 NRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEY 671 (942)
Q Consensus 602 ~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~ 671 (942)
-|+++||+||||++-.-.- ++.-++....+-.-...|+.|.+ .|..++|+|+.+...++..++.+
T Consensus 7 i~~~v~d~dGv~tdg~~~~----~~~g~~~~~~~~~D~~~~~~L~~-~Gi~laIiT~k~~~~~~~~l~~l 71 (169)
T TIGR02726 7 IKLVILDVDGVMTDGRIVI----NDEGIESRNFDIKDGMGVIVLQL-CGIDVAIITSKKSGAVRHRAEEL 71 (169)
T ss_pred CeEEEEeCceeeECCeEEE----cCCCcEEEEEecchHHHHHHHHH-CCCEEEEEECCCcHHHHHHHHHC
Confidence 6899999999999851100 00000122344455567777776 57888888888777666665543
No 152
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=96.84 E-value=0.0011 Score=64.39 Aligned_cols=64 Identities=22% Similarity=0.343 Sum_probs=47.5
Q ss_pred EEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCC--------hhhHHHhhcccCc
Q 002285 603 RLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSD--------RNVLDDNFGEYNM 673 (942)
Q Consensus 603 rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~--------~~~L~~~~~~~~l 673 (942)
|+++||+||||++.... .+ +.....+.+.+.++|+.|.+ .|..++|+|+++ ...+...+..+++
T Consensus 1 k~~~~D~dgtL~~~~~~----~~--~~~~~~~~~~v~~~l~~L~~-~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l 72 (132)
T TIGR01662 1 KGVVLDLDGTLTDDVPY----VD--DEDERILYPEVPDALAELKE-AGYKVVIVTNQSGIGRGKFSSGRVARRLEELGV 72 (132)
T ss_pred CEEEEeCCCceecCCCC----CC--CHHHheeCCCHHHHHHHHHH-CCCEEEEEECCccccccHHHHHHHHHHHHHCCC
Confidence 58999999999963110 00 01234678999999999986 599999999998 6777777776654
No 153
>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane]
Probab=96.67 E-value=0.1 Score=59.14 Aligned_cols=264 Identities=13% Similarity=0.108 Sum_probs=135.4
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCEEEEcCCch--hhHHHHHHhhCCCCeEEEEeccCCCChhHhhcCCchHHHHHHhhhc
Q 002285 222 FDAYKRANQMFAKVVNNIYEEGDVVWCHDYHL--MFLPQCLKEYNNNMKVGWFLHTPFPSSEIHRTLPSRTELLRSVLAA 299 (942)
Q Consensus 222 w~~Y~~vN~~fa~~i~~~~~~~DiIwvHDyhL--~llp~~Lr~~~p~~~I~~flH~PfP~~e~fr~lp~r~~il~~ll~a 299 (942)
|..|+++-+.+.. +++|++..=|+-= +.+...||+.+|++||+++. ++.+|.-=|+|...+.. .+
T Consensus 71 lk~~~~~~~~i~~------~kpD~~i~IDsPdFnl~vak~lrk~~p~i~iihYV-----~PsVWAWr~~Ra~~i~~--~~ 137 (381)
T COG0763 71 LKIRRELVRYILA------NKPDVLILIDSPDFNLRVAKKLRKAGPKIKIIHYV-----SPSVWAWRPKRAVKIAK--YV 137 (381)
T ss_pred HHHHHHHHHHHHh------cCCCEEEEeCCCCCchHHHHHHHHhCCCCCeEEEE-----CcceeeechhhHHHHHH--Hh
Confidence 6666665555443 5789888777542 35789999999999999776 34456544555333322 23
Q ss_pred cEEeecCHHHHHHHHHHHHHHhccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHh----cCCc
Q 002285 300 DLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERF----AGRK 375 (942)
Q Consensus 300 DlIgF~t~~~~~~Fl~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~----~~~~ 375 (942)
|++.--.+--.. |.+ + .|.. ..|-|++ =.|.-.+.+ ..+.+|+++ ..+.
T Consensus 138 D~lLailPFE~~-~y~---k-~g~~-----~~yVGHp--------l~d~i~~~~---------~r~~ar~~l~~~~~~~~ 190 (381)
T COG0763 138 DHLLAILPFEPA-FYD---K-FGLP-----CTYVGHP--------LADEIPLLP---------DREAAREKLGIDADEKT 190 (381)
T ss_pred hHeeeecCCCHH-HHH---h-cCCC-----eEEeCCh--------hhhhccccc---------cHHHHHHHhCCCCCCCe
Confidence 443211110001 110 0 1100 1122221 112111111 112245555 2344
Q ss_pred eEEEee-cc-cccCCHHHHHHHHHHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEE
Q 002285 376 VMLGVD-RL-DMIKGIPQKILAFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIH 453 (942)
Q Consensus 376 iIl~Vg-RL-d~~KGi~~lL~Af~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~ 453 (942)
+.+..| |- +-..-.+.+++|++++.+++|+.+ +++- . --+.|+.++.+ ....-... ..++
T Consensus 191 lalLPGSR~sEI~rl~~~f~~a~~~l~~~~~~~~--~vlp-----~--~~~~~~~~~~~---~~~~~~~~------~~~~ 252 (381)
T COG0763 191 LALLPGSRRSEIRRLLPPFVQAAQELKARYPDLK--FVLP-----L--VNAKYRRIIEE---ALKWEVAG------LSLI 252 (381)
T ss_pred EEEecCCcHHHHHHHHHHHHHHHHHHHhhCCCce--EEEe-----c--CcHHHHHHHHH---HhhccccC------ceEE
Confidence 445444 43 344667888899999999999976 4333 1 11233333222 22111000 0122
Q ss_pred EeCCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhccCCCceEEEeCCC-Cccccc----C-----------Cce
Q 002285 454 HLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFA-GAAQSL----G-----------AGA 517 (942)
Q Consensus 454 ~l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~-G~~~~l----g-----------~~g 517 (942)
+...+....+.+||+.+..| |.+.+|++.| +.|.|++--. ...-.+ . .+-
T Consensus 253 -----~~~~~~~~a~~~aD~al~aS-----GT~tLE~aL~----g~P~Vv~Yk~~~it~~iak~lvk~~yisLpNIi~~~ 318 (381)
T COG0763 253 -----LIDGEKRKAFAAADAALAAS-----GTATLEAALA----GTPMVVAYKVKPITYFIAKRLVKLPYVSLPNILAGR 318 (381)
T ss_pred -----ecCchHHHHHHHhhHHHHhc-----cHHHHHHHHh----CCCEEEEEeccHHHHHHHHHhccCCcccchHHhcCC
Confidence 22457788899999999999 7999999999 3565544322 222211 0 011
Q ss_pred EEEC-----CCCHHHHHHHHHHHhCCCHH--HHHHHHHHHhHHHHhc
Q 002285 518 ILVN-----PWNITEVASSIGYALNMPAD--EREKRHLHNFMHVTTH 557 (942)
Q Consensus 518 llVn-----P~D~~~lA~aI~~aL~m~~~--er~~r~~~~~~~v~~~ 557 (942)
.+|+ -..++.+|+++..++.++.. +..+..+.+.+.+.+.
T Consensus 319 ~ivPEliq~~~~pe~la~~l~~ll~~~~~~~~~~~~~~~l~~~l~~~ 365 (381)
T COG0763 319 EIVPELIQEDCTPENLARALEELLLNGDRREALKEKFRELHQYLRED 365 (381)
T ss_pred ccchHHHhhhcCHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHcCC
Confidence 1121 12478889999998887621 2223334455555544
No 154
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=96.42 E-value=0.005 Score=59.91 Aligned_cols=65 Identities=12% Similarity=0.100 Sum_probs=43.4
Q ss_pred EEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCC-ChhhHHHhhcc
Q 002285 603 RLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGS-DRNVLDDNFGE 670 (942)
Q Consensus 603 rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR-~~~~L~~~~~~ 670 (942)
|+|++|+||||++.-...- ....+- ....+.+.+.+.|+.|.+ .|..++|+|++ +.......+..
T Consensus 1 kli~~DlD~Tl~~~~~~~~-~~~~~~-~~~~~~~gv~e~L~~Lk~-~g~~l~i~Sn~~~~~~~~~~l~~ 66 (128)
T TIGR01681 1 KVIVFDLDNTLWTGENIVV-GEDPII-DLEVTIKEIRDKLQTLKK-NGFLLALASYNDDPHVAYELLKI 66 (128)
T ss_pred CEEEEeCCCCCCCCCcccc-cCCcch-hhHHHHHHHHHHHHHHHH-CCeEEEEEeCCCCHHHHHHHHHh
Confidence 5899999999998621000 000000 000357899999999987 58999999999 67666555543
No 155
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=96.37 E-value=0.0029 Score=69.08 Aligned_cols=52 Identities=17% Similarity=0.219 Sum_probs=40.3
Q ss_pred EEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHH
Q 002285 603 RLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDD 666 (942)
Q Consensus 603 rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~ 666 (942)
++|+||+||||..... + ...+.|.+.++|++|.+ .|..++++|||+....+.
T Consensus 2 k~i~~D~DGtl~~~~~-~----------~~~~~~~a~~al~~l~~-~G~~~~~~Tn~~~~~~~~ 53 (257)
T TIGR01458 2 KGVLLDISGVLYISDA-K----------SGVAVPGSQEAVKRLRG-ASVKVRFVTNTTKESKQD 53 (257)
T ss_pred CEEEEeCCCeEEeCCC-c----------ccCcCCCHHHHHHHHHH-CCCeEEEEECCCCCCHHH
Confidence 6899999999997511 0 11267799999999997 599999999987775433
No 156
>PRK10444 UMP phosphatase; Provisional
Probab=96.22 E-value=0.0039 Score=67.76 Aligned_cols=53 Identities=19% Similarity=0.217 Sum_probs=44.7
Q ss_pred EEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhccc
Q 002285 603 RLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEY 671 (942)
Q Consensus 603 rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~ 671 (942)
++|+||+||||... . .+.|.+.++|++|.+ .|..++++|+|+......+...+
T Consensus 2 ~~v~~DlDGtL~~~--------------~-~~~p~a~~~l~~L~~-~g~~~~~~Tn~~~~~~~~~~~~l 54 (248)
T PRK10444 2 KNVICDIDGVLMHD--------------N-VAVPGAAEFLHRILD-KGLPLVLLTNYPSQTGQDLANRF 54 (248)
T ss_pred cEEEEeCCCceEeC--------------C-eeCccHHHHHHHHHH-CCCeEEEEeCCCCCCHHHHHHHH
Confidence 68999999999975 2 467899999999997 69999999999997776666654
No 157
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=96.16 E-value=0.026 Score=62.23 Aligned_cols=37 Identities=14% Similarity=0.144 Sum_probs=29.4
Q ss_pred CHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcC
Q 002285 779 TKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFE 822 (942)
Q Consensus 779 nKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~ 822 (942)
.|..++..++++++ .+++.+++||| ..+|..+=+.++
T Consensus 196 ~k~~~~~~~l~~~~------~~p~~~l~IGD-s~~Di~aA~~AG 232 (273)
T PRK13225 196 SKRRALSQLVAREG------WQPAAVMYVGD-ETRDVEAARQVG 232 (273)
T ss_pred CCHHHHHHHHHHhC------cChhHEEEECC-CHHHHHHHHHCC
Confidence 46788899999887 45788999999 888877666654
No 158
>KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism]
Probab=96.11 E-value=0.00026 Score=86.65 Aligned_cols=219 Identities=13% Similarity=0.073 Sum_probs=129.8
Q ss_pred CCChhhhhhhhcccCCEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhh---
Q 002285 587 SLPIKGAVDSYLQSNNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNV--- 663 (942)
Q Consensus 587 ~l~~~~~~~~y~~s~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~--- 663 (942)
.++..++.......+.-|.++|+||||-.++.+| ..+.++..++.+-.+..+ ....+++|||.+..
T Consensus 174 pfpssEi~r~lp~r~eIl~gll~~~~i~f~t~d~---------arhFls~c~R~l~~~~~s--~~~~~~v~~rgr~~~v~ 242 (732)
T KOG1050|consen 174 PFPSSEIYRCLPVRKEILRGLLYDDLLGFHTDDY---------ARHFLSTCSRLLGLEVAS--KFPTAGVSGRGRDVSVK 242 (732)
T ss_pred CCChHHHHHhcccHHHHHHhhhccCccccccccH---------HHHHHHHHHHHHHhhhhc--cCCcceEEeccceeeee
Confidence 4456677777777777899999999999998888 355566666666666554 33456799999665
Q ss_pred -------HHHhhcccCceEEeecceEEEeC--CCceeecccCCC-----ChhHHHHHHHHHHHHHhc-------------
Q 002285 664 -------LDDNFGEYNMWLAAENGMFLRLT--TGEWMTTMPENL-----NMDWVDSVKHVFEYFTER------------- 716 (942)
Q Consensus 664 -------L~~~~~~~~l~liaehG~~ir~~--~~~w~~~~~~~~-----~~~w~~~v~~il~~~~~r------------- 716 (942)
..++.+..+++.+++||.+++.. ++...... +.. ...+.....+.++.|-+-
T Consensus 243 ~~pigid~~r~v~~~~~~~~~~~~~ei~~~~~g~klilgv-D~~d~~kg~~~Kl~a~e~~L~~~pe~~~kVvliqi~~~~ 321 (732)
T KOG1050|consen 243 ALPIGIDVQRFVKLLELPYVGSKGMEIKEPFKGKKLILGV-DRLDSIKGIQLKLLAFEQFLEEYPEWIDKVVLIQIENPK 321 (732)
T ss_pred ecccccchHHhhccccchhHHHHHHHHhhhccCCceEecc-cccccccCchHHHHHHHHHHHhChhhhceEEEEEEecCC
Confidence 77777777899999999999842 22211111 111 112333344444433221
Q ss_pred -CCCeeeeeecceEEEEEeccchHHhHHHHHHHHHHHhcCCCCC-CCeEEEEcCcEEEEEE-CCCCHHHHHHHHHHHhcc
Q 002285 717 -TPRSHFEVRETSLVWNYKYADLEFGRLQARDILQHLWSGPISN-ASVDVVQGGRSVEVRA-VGVTKGAAIDRILGEIVR 793 (942)
Q Consensus 717 -~~Gs~iE~K~~sl~~hyr~ad~e~~~~qa~el~~~L~~~~~~~-~~v~v~~G~~~vEV~p-~gvnKG~Av~~Ll~~l~~ 793 (942)
++|.-+|+-..++..||+..+..++...+ ..+ ..+... ...+...+..+.|++| ..+.||.++..+...++.
T Consensus 322 ~~~~~~v~~~k~~v~~~v~rIn~~f~~~~~----~pV-~~~~~~~~~~~l~a~~~Vaev~~v~s~rdGmnl~~~e~i~~~ 396 (732)
T KOG1050|consen 322 RTDGKEVEELKFCVSVHVRRINEKFGSASY----QPV-HSLLKDLPFLELLALYKVAEVCPVTSWRDGMNLVFLEYILCQ 396 (732)
T ss_pred cccchHHHHHHHHhHhhhhhhhhccCCccc----ceE-EEeeccCCHHHHhhhHHhhhheeecccccccchhhhHHHHhh
Confidence 11111111223334444443333322110 000 001111 1233455667899998 689999999988877764
Q ss_pred cCCCCCCCceEEEEeCCCCCCHHHHHhcCcC
Q 002285 794 HKGLKTPIDYVLCIGHFLQKDEDIYTFFEPE 824 (942)
Q Consensus 794 ~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~~ 824 (942)
.+. ..+.=...|+|| +.+||+.+..++.+
T Consensus 397 ~~~-~~~lVlsef~G~-~~tl~d~aivvnpw 425 (732)
T KOG1050|consen 397 ENK-KSVLVLSEFIGD-DTTLEDAAIVVNPW 425 (732)
T ss_pred ccc-CCceEEeeeccc-cccccccCEEECCc
Confidence 320 112234589999 99999999999886
No 159
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=96.06 E-value=0.014 Score=62.85 Aligned_cols=81 Identities=7% Similarity=0.002 Sum_probs=53.0
Q ss_pred ChhhhhhhhcccCCEEEEEecCCccCCCCCccCCCCCcc---------------------ccCCCCCChhHHHHHHHhhh
Q 002285 589 PIKGAVDSYLQSNNRLLILGFNATLTAPVDFLGRRGGQI---------------------REMEPKLHPDLKEPLKRLCD 647 (942)
Q Consensus 589 ~~~~~~~~y~~s~~rLi~lD~DGTL~~~~~~P~~~~~~~---------------------~~~~~~~~~~~~~aL~~L~~ 647 (942)
+++++.+.....+...|+||+||||++..+.-. .+.+. ......+-+.+.+.|..|.+
T Consensus 50 ~~~~~~~~~~~~~p~aViFDlDgTLlDSs~~~~-~G~~~~s~~~~~~l~g~~~w~~~~~~~~~~s~p~~~a~elL~~l~~ 128 (237)
T TIGR01672 50 SVAQIENSLEGRPPIAVSFDIDDTVLFSSPGFW-RGKKTFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQR 128 (237)
T ss_pred EHHHHHHhcCCCCCeEEEEeCCCccccCcHHHh-CCcccCCHHHhhhhcChHHHHHHHHhcccCCcchhHHHHHHHHHHH
Confidence 466777777766777999999999998754100 01000 01122344458999999987
Q ss_pred CCCCeEEEEcCC----ChhhHHHhhccc
Q 002285 648 DPMTTVVVLSGS----DRNVLDDNFGEY 671 (942)
Q Consensus 648 d~g~~V~IvSGR----~~~~L~~~~~~~ 671 (942)
.|.+++|||+| ....++.+++.+
T Consensus 129 -~G~~i~iVTnr~~~k~~~~a~~ll~~l 155 (237)
T TIGR01672 129 -RGDAIFFVTGRTPGKTDTVSKTLAKNF 155 (237)
T ss_pred -CCCEEEEEeCCCCCcCHHHHHHHHHHh
Confidence 69999999999 444555555443
No 160
>PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2.4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A ....
Probab=96.02 E-value=0.025 Score=61.36 Aligned_cols=96 Identities=22% Similarity=0.353 Sum_probs=61.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCEEEEcCCchhhHHHHHHhhCC------CCeEEEEeccC-CCC---hhHhh--cCC
Q 002285 220 SQFDAYKRANQMFAKVVNNIYEEGDVVWCHDYHLMFLPQCLKEYNN------NMKVGWFLHTP-FPS---SEIHR--TLP 287 (942)
Q Consensus 220 ~~w~~Y~~vN~~fa~~i~~~~~~~DiIwvHDyhL~llp~~Lr~~~p------~~~I~~flH~P-fP~---~e~fr--~lp 287 (942)
+....|.-+++.-++.+...-..+||||+||||..++|.+||.... ++++.+++|.. |.. .+.+. .+|
T Consensus 111 d~~~rf~~fs~a~le~~~~l~~~pDIIH~hDW~tal~p~~lk~~~~~~~~~~~~~~v~TIHN~~yqg~~~~~~~~~~gl~ 190 (245)
T PF08323_consen 111 DNAERFAFFSRAALELLKKLGWKPDIIHCHDWHTALAPLYLKERYQQDPFFANIPTVFTIHNLEYQGIFPPEDLKALGLP 190 (245)
T ss_dssp THHHHHHHHHHHHHHHHCTCT-S-SEEEEECGGGTTHHHHHHHCCSS------SEEEEEESSTT---EEEGGGGGCTT-G
T ss_pred hHHHHHHHHHHHHHHHHHhhCCCCCEEEecCchHHHHHHHhccccccccccccceeEEEEcccccCCcCCHHHHHHcCCC
Confidence 3344555455555554444322789999999999999999998764 59999999974 321 11111 123
Q ss_pred ch--------------HHHHHHhhhccEEeecCHHHHHHHHH
Q 002285 288 SR--------------TELLRSVLAADLVGFHTYDYARHFVS 315 (942)
Q Consensus 288 ~r--------------~~il~~ll~aDlIgF~t~~~~~~Fl~ 315 (942)
+. .-+-.|+..||.|..-++.|++..++
T Consensus 191 ~~~~~~~~~~~~~~~in~lk~gi~~AD~v~TVS~~Ya~Ei~~ 232 (245)
T PF08323_consen 191 DEYFQNLDEYEFYGQINFLKAGIVYADKVTTVSPTYAREIQT 232 (245)
T ss_dssp GGGS-STTTTEETTEEEHHHHHHHHSSEEEESSHHHHHHTTS
T ss_pred HHHhccccccccccccCHHHHHHHhcCEeeeCCHHHHHHHhC
Confidence 21 24557888999999999999876544
No 161
>PLN02645 phosphoglycolate phosphatase
Probab=95.92 E-value=0.0063 Score=68.35 Aligned_cols=53 Identities=13% Similarity=0.113 Sum_probs=42.2
Q ss_pred CEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcc
Q 002285 602 NRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGE 670 (942)
Q Consensus 602 ~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~ 670 (942)
.++|+||+||||... . .+-|.+.++|++|.+ .|.+++++|+|+......++..
T Consensus 28 ~~~~~~D~DGtl~~~--------------~-~~~~ga~e~l~~lr~-~g~~~~~~TN~~~~~~~~~~~~ 80 (311)
T PLN02645 28 VETFIFDCDGVIWKG--------------D-KLIEGVPETLDMLRS-MGKKLVFVTNNSTKSRAQYGKK 80 (311)
T ss_pred CCEEEEeCcCCeEeC--------------C-ccCcCHHHHHHHHHH-CCCEEEEEeCCCCCCHHHHHHH
Confidence 578999999999975 2 345788999999997 5999999999996555554433
No 162
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=95.86 E-value=0.026 Score=59.43 Aligned_cols=38 Identities=11% Similarity=-0.025 Sum_probs=31.9
Q ss_pred CHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCc
Q 002285 779 TKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 779 nKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
-|...+.+++++++ .+++.+++||| ..+|..+-+.++-
T Consensus 139 p~p~~~~~~~~~~~------~~~~~~~~iGD-s~~Di~aa~~aG~ 176 (214)
T PRK13288 139 PDPEPVLKALELLG------AKPEEALMVGD-NHHDILAGKNAGT 176 (214)
T ss_pred CCcHHHHHHHHHcC------CCHHHEEEECC-CHHHHHHHHHCCC
Confidence 46788899999987 45789999999 9999998888764
No 163
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=95.85 E-value=0.054 Score=59.70 Aligned_cols=41 Identities=15% Similarity=-0.013 Sum_probs=33.3
Q ss_pred CCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCc
Q 002285 776 VGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 776 ~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
.+-.|...++.+++.++ ++++.+++||| ..+|..+-+.++-
T Consensus 155 ~~Kp~p~~~~~~~~~~g------~~~~~~l~IGD-~~~Di~aA~~aGi 195 (272)
T PRK13223 155 QKKPDPAALLFVMKMAG------VPPSQSLFVGD-SRSDVLAAKAAGV 195 (272)
T ss_pred CCCCCcHHHHHHHHHhC------CChhHEEEECC-CHHHHHHHHHCCC
Confidence 34456778999999987 56789999999 9999999877753
No 164
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=95.83 E-value=0.0077 Score=66.54 Aligned_cols=49 Identities=16% Similarity=0.244 Sum_probs=38.1
Q ss_pred CEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHH
Q 002285 602 NRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDD 666 (942)
Q Consensus 602 ~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~ 666 (942)
.++|+||+||||... . .+-+.+.++|++|.+ .|..++++|||+......
T Consensus 2 ~~~~~~D~DGtl~~~--------------~-~~~~ga~e~l~~L~~-~g~~~~~~Tnns~~~~~~ 50 (279)
T TIGR01452 2 AQGFIFDCDGVLWLG--------------E-RVVPGAPELLDRLAR-AGKAALFVTNNSTKSRAE 50 (279)
T ss_pred ccEEEEeCCCceEcC--------------C-eeCcCHHHHHHHHHH-CCCeEEEEeCCCCCCHHH
Confidence 468999999999874 1 244569999999987 699999999987544433
No 165
>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process
Probab=95.72 E-value=1.9 Score=49.64 Aligned_cols=235 Identities=19% Similarity=0.238 Sum_probs=124.1
Q ss_pred CCCCEEEEcCCchh--hHHHHHHhhCCCCeEEEEeccCCCChhHhhcCCchHHHHHHhhhccEEeecCHHHHHHHHHHHH
Q 002285 241 EEGDVVWCHDYHLM--FLPQCLKEYNNNMKVGWFLHTPFPSSEIHRTLPSRTELLRSVLAADLVGFHTYDYARHFVSACT 318 (942)
Q Consensus 241 ~~~DiIwvHDyhL~--llp~~Lr~~~p~~~I~~flH~PfP~~e~fr~lp~r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~ 318 (942)
+++|+|..=||-=+ .+.+.+|++++..+|.++. ++.+|.-=++|...++.. +|.+.- .+.+-..|.+.
T Consensus 81 ~~pd~vIlID~pgFNlrlak~lk~~~~~~~viyYI-----~PqvWAWr~~R~~~i~~~--~D~ll~-ifPFE~~~y~~-- 150 (373)
T PF02684_consen 81 EKPDVVILIDYPGFNLRLAKKLKKRGIPIKVIYYI-----SPQVWAWRPGRAKKIKKY--VDHLLV-IFPFEPEFYKK-- 150 (373)
T ss_pred cCCCEEEEeCCCCccHHHHHHHHHhCCCceEEEEE-----CCceeeeCccHHHHHHHH--HhheeE-CCcccHHHHhc--
Confidence 47899888887643 5789999999888888775 345665555665544432 232210 00000111110
Q ss_pred HHhccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHh--cCCceE-EEee-cccccCC-HHHHH
Q 002285 319 RILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERF--AGRKVM-LGVD-RLDMIKG-IPQKI 393 (942)
Q Consensus 319 r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~--~~~~iI-l~Vg-RLd~~KG-i~~lL 393 (942)
.|+. ..|-|++ =+|.-... .. ....++.+ .++++| +.-| |-...|- ++.++
T Consensus 151 --~g~~-----~~~VGHP--------l~d~~~~~-----~~----~~~~~~~~l~~~~~iIaLLPGSR~~EI~rllP~~l 206 (373)
T PF02684_consen 151 --HGVP-----VTYVGHP--------LLDEVKPE-----PD----RAEAREKLLDPDKPIIALLPGSRKSEIKRLLPIFL 206 (373)
T ss_pred --cCCC-----eEEECCc--------chhhhccC-----CC----HHHHHHhcCCCCCcEEEEeCCCCHHHHHHHHHHHH
Confidence 0100 1222221 12221111 00 11122222 344443 4444 7666654 58899
Q ss_pred HHHHHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccE
Q 002285 394 LAFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDV 473 (942)
Q Consensus 394 ~Af~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv 473 (942)
+|++++.+++|+++ ++....+ ..+ .+.+++.....+.. .++... ..+...+++.||+
T Consensus 207 ~aa~~l~~~~p~l~----fvvp~a~-----~~~---~~~i~~~~~~~~~~------~~~~~~-----~~~~~~~m~~ad~ 263 (373)
T PF02684_consen 207 EAAKLLKKQRPDLQ----FVVPVAP-----EVH---EELIEEILAEYPPD------VSIVII-----EGESYDAMAAADA 263 (373)
T ss_pred HHHHHHHHhCCCeE----EEEecCC-----HHH---HHHHHHHHHhhCCC------CeEEEc-----CCchHHHHHhCcc
Confidence 99999999999964 3322222 111 22233333222211 123222 3466788999999
Q ss_pred EEECCCCCCCChhHHHHHhhccCCCce-EEEeCCC----------------Cccccc-CCc---eEEECCCCHHHHHHHH
Q 002285 474 ALVTSLRDGMNLVSYEFVACQASKKGV-LILSEFA----------------GAAQSL-GAG---AILVNPWNITEVASSI 532 (942)
Q Consensus 474 ~v~pSl~EG~~Lv~lEamA~~~~~~G~-lIlSe~~----------------G~~~~l-g~~---gllVnP~D~~~lA~aI 532 (942)
.+++| |.+.+|++..+ .| ||+-... |..-.+ |.. -++-+-.+++.+++++
T Consensus 264 al~~S-----GTaTLE~Al~g----~P~Vv~Yk~~~lt~~iak~lvk~~~isL~Niia~~~v~PEliQ~~~~~~~i~~~~ 334 (373)
T PF02684_consen 264 ALAAS-----GTATLEAALLG----VPMVVAYKVSPLTYFIAKRLVKVKYISLPNIIAGREVVPELIQEDATPENIAAEL 334 (373)
T ss_pred hhhcC-----CHHHHHHHHhC----CCEEEEEcCcHHHHHHHHHhhcCCEeechhhhcCCCcchhhhcccCCHHHHHHHH
Confidence 99999 79999998882 45 4443332 222222 111 1222446899999999
Q ss_pred HHHhCCCHH
Q 002285 533 GYALNMPAD 541 (942)
Q Consensus 533 ~~aL~m~~~ 541 (942)
..+|.+++.
T Consensus 335 ~~ll~~~~~ 343 (373)
T PF02684_consen 335 LELLENPEK 343 (373)
T ss_pred HHHhcCHHH
Confidence 999987643
No 166
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
Probab=95.71 E-value=1.8 Score=49.86 Aligned_cols=71 Identities=23% Similarity=0.191 Sum_probs=50.3
Q ss_pred EeCCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhccCCCceEEEeCCCCccccc---CCceEEECCCCHHHHHH
Q 002285 454 HLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSL---GAGAILVNPWNITEVAS 530 (942)
Q Consensus 454 ~l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l---g~~gllVnP~D~~~lA~ 530 (942)
.+.+.++..++.+|++.||++|-.|. |.. .||.+. |+++++ . |-.++. |.+.++| +.|.+++.+
T Consensus 265 ~l~~~l~~~~~l~Ll~~a~~vitdSS----ggi-~EA~~l-----g~Pvv~-l-~~R~e~~~~g~nvl~v-g~~~~~I~~ 331 (365)
T TIGR03568 265 RLFKSLGQERYLSLLKNADAVIGNSS----SGI-IEAPSF-----GVPTIN-I-GTRQKGRLRADSVIDV-DPDKEEIVK 331 (365)
T ss_pred EEECCCChHHHHHHHHhCCEEEEcCh----hHH-Hhhhhc-----CCCEEe-e-cCCchhhhhcCeEEEe-CCCHHHHHH
Confidence 35688999999999999999995442 222 899998 543332 1 223332 5566767 678999999
Q ss_pred HHHHHhC
Q 002285 531 SIGYALN 537 (942)
Q Consensus 531 aI~~aL~ 537 (942)
++.++++
T Consensus 332 a~~~~~~ 338 (365)
T TIGR03568 332 AIEKLLD 338 (365)
T ss_pred HHHHHhC
Confidence 9999654
No 167
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=95.65 E-value=0.018 Score=58.76 Aligned_cols=56 Identities=14% Similarity=0.233 Sum_probs=37.6
Q ss_pred CCEEEEEecCCccCCCCC-ccCCCCCccccCCCC-CChhHHHHHHHhhhCCCCeEEEEcCCCh
Q 002285 601 NNRLLILGFNATLTAPVD-FLGRRGGQIREMEPK-LHPDLKEPLKRLCDDPMTTVVVLSGSDR 661 (942)
Q Consensus 601 ~~rLi~lD~DGTL~~~~~-~P~~~~~~~~~~~~~-~~~~~~~aL~~L~~d~g~~V~IvSGR~~ 661 (942)
..|+++||+||||+.... .+ . -+.+ .+-+ +-|.+.++|++|.+ .|..++|+|..+.
T Consensus 12 ~~k~~~~D~Dgtl~~~~~~~~--~-~~~~-~~~~~~~pgv~e~L~~Lk~-~G~~l~I~TN~~~ 69 (166)
T TIGR01664 12 QSKVAAFDLDGTLITTRSGKV--F-PTSA-SDWRFLYPEIPAKLQELDD-EGYKIVIFTNQSG 69 (166)
T ss_pred cCcEEEEeCCCceEecCCCCc--c-cCCh-HHeEEecCCHHHHHHHHHH-CCCEEEEEeCCcc
Confidence 357899999999997421 00 0 0000 1112 45889999999987 6999999997554
No 168
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=95.57 E-value=2.6 Score=48.22 Aligned_cols=243 Identities=15% Similarity=0.080 Sum_probs=120.2
Q ss_pred CCCEEEEcCCchhhHHHHHHhhCCCCeEEEEeccCCCChhHhhcCCchHHHHHHhh--hccEEeecCHHHHHHHHHHHHH
Q 002285 242 EGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSSEIHRTLPSRTELLRSVL--AADLVGFHTYDYARHFVSACTR 319 (942)
Q Consensus 242 ~~DiIwvHDyhL~llp~~Lr~~~p~~~I~~flH~PfP~~e~fr~lp~r~~il~~ll--~aDlIgF~t~~~~~~Fl~~~~r 319 (942)
++|+|.||.=-.-.++..+....-++||++.... .-+.++. -|.-+++.|.+. -||+----+..+.++.++
T Consensus 67 ~Pd~Vlv~GD~~~~la~alaA~~~~ipv~HieaG-lRs~d~~--~g~~de~~R~~i~~la~lhf~~t~~~~~~L~~---- 139 (346)
T PF02350_consen 67 KPDAVLVLGDRNEALAAALAAFYLNIPVAHIEAG-LRSGDRT--EGMPDEINRHAIDKLAHLHFAPTEEARERLLQ---- 139 (346)
T ss_dssp T-SEEEEETTSHHHHHHHHHHHHTT-EEEEES------S-TT--SSTTHHHHHHHHHHH-SEEEESSHHHHHHHHH----
T ss_pred CCCEEEEEcCCchHHHHHHHHHHhCCCEEEecCC-CCccccC--CCCchhhhhhhhhhhhhhhccCCHHHHHHHHh----
Confidence 6799999966655666555555668898855433 1111221 122344444432 256665566666666543
Q ss_pred HhccccCCCceecCCeeeEEEEee-CccCccccchhcCChhhHHHHHHHHHHhcCCceEEEeeccccc---CCHHHHHHH
Q 002285 320 ILGLEGTPEGVEDQGRLTRVAAFP-IGIDSDRFVRALELPQVQDHINELKERFAGRKVMLGVDRLDMI---KGIPQKILA 395 (942)
Q Consensus 320 ~l~~~~~~~~i~~~gr~~~v~viP-~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~---KGi~~lL~A 395 (942)
.|. ...+|.++. .++|.-........+.. ....+-....++.+++..-|.... .....++.+
T Consensus 140 -~G~-----------~~~rI~~vG~~~~D~l~~~~~~~~~~~--~~~~i~~~~~~~~iLvt~H~~t~~~~~~~~~~i~~~ 205 (346)
T PF02350_consen 140 -EGE-----------PPERIFVVGNPGIDALLQNKEEIEEKY--KNSGILQDAPKPYILVTLHPVTNEDNPERLEQILEA 205 (346)
T ss_dssp -TT-------------GGGEEE---HHHHHHHHHHHTTCC-H--HHHHHHHCTTSEEEEEE-S-CCCCTHH--HHHHHHH
T ss_pred -cCC-----------CCCeEEEEChHHHHHHHHhHHHHhhhh--hhHHHHhccCCCEEEEEeCcchhcCChHHHHHHHHH
Confidence 222 233455443 35665322211111110 011221122344444555454433 456788888
Q ss_pred HHHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEEE
Q 002285 396 FEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVAL 475 (942)
Q Consensus 396 f~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~v 475 (942)
++.+.+. +++ .+|....+ -| .....+.+...+++ .++ +..+++..++..+++.|+++|
T Consensus 206 l~~L~~~-~~~----~vi~~~hn----~p---~~~~~i~~~l~~~~---------~v~-~~~~l~~~~~l~ll~~a~~vv 263 (346)
T PF02350_consen 206 LKALAER-QNV----PVIFPLHN----NP---RGSDIIIEKLKKYD---------NVR-LIEPLGYEEYLSLLKNADLVV 263 (346)
T ss_dssp HHHHHHH-TTE----EEEEE--S-----H---HHHHHHHHHHTT-T---------TEE-EE----HHHHHHHHHHESEEE
T ss_pred HHHHHhc-CCC----cEEEEecC----Cc---hHHHHHHHHhcccC---------CEE-EECCCCHHHHHHHHhcceEEE
Confidence 8888776 553 33333221 11 12333433333321 244 346788999999999999998
Q ss_pred ECCCCCCCChhHH-HHHhhccCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHhCC
Q 002285 476 VTSLRDGMNLVSY-EFVACQASKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVASSIGYALNM 538 (942)
Q Consensus 476 ~pSl~EG~~Lv~l-EamA~~~~~~G~lIlSe~~G~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m 538 (942)
--|- .+. ||..+ +.|+|.=...|-.++. ....++|. .|.+++.++|.+++..
T Consensus 264 gdSs------GI~eEa~~l----g~P~v~iR~~geRqe~r~~~~nvlv~-~~~~~I~~ai~~~l~~ 318 (346)
T PF02350_consen 264 GDSS------GIQEEAPSL----GKPVVNIRDSGERQEGRERGSNVLVG-TDPEAIIQAIEKALSD 318 (346)
T ss_dssp ESSH------HHHHHGGGG----T--EEECSSS-S-HHHHHTTSEEEET-SSHHHHHHHHHHHHH-
T ss_pred EcCc------cHHHHHHHh----CCeEEEecCCCCCHHHHhhcceEEeC-CCHHHHHHHHHHHHhC
Confidence 8772 355 99998 2355555556666554 23455566 8999999999999975
No 169
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=95.53 E-value=0.021 Score=56.58 Aligned_cols=70 Identities=20% Similarity=0.324 Sum_probs=44.6
Q ss_pred cCCEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccCce
Q 002285 600 SNNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYNMW 674 (942)
Q Consensus 600 s~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l~ 674 (942)
.+.||+++|.||||++-.=.-+..+..++. ..-.---.|+.|.+ .|++|+|+|||.-.-++...+.+++-
T Consensus 6 ~~IkLli~DVDGvLTDG~ly~~~~Gee~Ka----Fnv~DG~Gik~l~~-~Gi~vAIITGr~s~ive~Ra~~LGI~ 75 (170)
T COG1778 6 KNIKLLILDVDGVLTDGKLYYDENGEEIKA----FNVRDGHGIKLLLK-SGIKVAIITGRDSPIVEKRAKDLGIK 75 (170)
T ss_pred hhceEEEEeccceeecCeEEEcCCCceeee----eeccCcHHHHHHHH-cCCeEEEEeCCCCHHHHHHHHHcCCc
Confidence 467999999999999842111001122221 11111234555554 59999999999999999988886543
No 170
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=95.48 E-value=0.012 Score=60.30 Aligned_cols=52 Identities=10% Similarity=0.162 Sum_probs=38.6
Q ss_pred EEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCCh
Q 002285 603 RLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDR 661 (942)
Q Consensus 603 rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~ 661 (942)
+++|||.||||+...+.. +. ..+..+.|.+.++|++|.+ .|.+++|+|.-+.
T Consensus 2 ~~~~~D~Dgtl~~~~~~~----~~--~~~~~~~pgv~e~L~~Lk~-~G~~l~i~TN~~~ 53 (176)
T TIGR00213 2 KAIFLDRDGTINIDHGYV----HE--IDNFEFIDGVIDALRELKK-MGYALVLVTNQSG 53 (176)
T ss_pred CEEEEeCCCCEeCCCCCC----CC--HHHeEECCCHHHHHHHHHH-CCCEEEEEeCCcc
Confidence 789999999999532211 00 0345678899999999987 6899999997643
No 171
>PRK14986 glycogen phosphorylase; Provisional
Probab=95.46 E-value=1.3 Score=55.33 Aligned_cols=150 Identities=11% Similarity=0.140 Sum_probs=103.7
Q ss_pred CCceEEEeecccccCCHHH-HHHHHHHhH--HhCCCCC-CcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcC
Q 002285 373 GRKVMLGVDRLDMIKGIPQ-KILAFEKFL--EENPSWR-DKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLT 448 (942)
Q Consensus 373 ~~~iIl~VgRLd~~KGi~~-lL~Af~~ll--~~~P~~~-~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~ 448 (942)
+..+++++-|+..-|-... +|..++++. ..+|+.. ..+++|.-|.+..++.. -+.+-+.|..++.-||..-...+
T Consensus 542 ~sLfd~qakR~heYKRq~LNil~~i~ry~~i~~~p~~~~~P~~~IFaGKAaP~y~~-aK~iIk~I~~va~~in~Dp~v~~ 620 (815)
T PRK14986 542 KALFDVQIKRIHEYKRQLMNVLHVITRYNRIKADPDAKWVPRVNIFAGKAASAYYM-AKHIIHLINDVAKVINNDPQIGD 620 (815)
T ss_pred ccceeeeehhhhhhhhhhHHHhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCcHH-HHHHHHHHHHHHHHhccChhhcC
Confidence 4567788999999998888 777766553 3455421 12566655555555544 34566777788887776544344
Q ss_pred cccEEEeCCCCCHHHHHHHHHHccEEEECCCC--CCCChhHHHHHhhccCCCceEEEeCCCCccccc-----CCceEEEC
Q 002285 449 TVPIHHLDRSLDFHALCALYAITDVALVTSLR--DGMNLVSYEFVACQASKKGVLILSEFAGAAQSL-----GAGAILVN 521 (942)
Q Consensus 449 ~~pV~~l~~~v~~~el~aly~~ADv~v~pSl~--EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l-----g~~gllVn 521 (942)
...|+|+. ..+-.--..++.+|||-.-+|++ |.-|..-+=||.- |++.+|..-|+..++ +.+++++-
T Consensus 621 ~lkVVFle-nY~vslAe~lipg~Dv~eqis~ag~EASGTsnMK~alN-----GaLtlgtlDG~nvEi~e~vG~eN~~~fG 694 (815)
T PRK14986 621 KLKVVFIP-NYSVSLAQLIIPAADLSEQISLAGTEASGTSNMKFALN-----GALTIGTLDGANVEMLEHVGEENIFIFG 694 (815)
T ss_pred ceeEEEeC-CCCHHHHHHhhhhhhhhhhCCCCCccccCcchhhHHhc-----CceeeeccCCchhHHHHhcCCCcEEEeC
Confidence 45688775 45566667889999999999984 7778777888774 999999999877665 46788886
Q ss_pred CCCHHHHHH
Q 002285 522 PWNITEVAS 530 (942)
Q Consensus 522 P~D~~~lA~ 530 (942)
. ..+++++
T Consensus 695 ~-~~~ev~~ 702 (815)
T PRK14986 695 N-TAEEVEA 702 (815)
T ss_pred C-CHHHHHH
Confidence 4 4555544
No 172
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=95.30 E-value=0.025 Score=56.25 Aligned_cols=53 Identities=19% Similarity=0.077 Sum_probs=38.2
Q ss_pred EEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCC
Q 002285 603 RLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSD 660 (942)
Q Consensus 603 rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~ 660 (942)
++++||+||||++..... ..+.. ...++-|.+.++|+.|.+ .|..++|+|..+
T Consensus 1 ~~~~~d~dgtl~~~~~~~---~~~~~-~~~~~~~g~~~~l~~Lk~-~g~~~~I~Sn~~ 53 (147)
T TIGR01656 1 PALFLDRDGVINEDTVSD---YPRSL-DDWQLRPGAVPALLTLRA-AGYTVVVVTNQS 53 (147)
T ss_pred CeEEEeCCCceeccCCcc---cCCCH-HHeEEcCChHHHHHHHHH-CCCEEEEEeCCC
Confidence 368999999999863200 00000 123578899999999997 699999999876
No 173
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A.
Probab=95.27 E-value=0.048 Score=54.12 Aligned_cols=92 Identities=17% Similarity=0.237 Sum_probs=44.8
Q ss_pred CCCEEEEcCCchhhHHHHHHhhCCCCeEEEEeccCCCChhHhhcCCch-----HHHHHH-hhhccEEeecCHHHHHHHHH
Q 002285 242 EGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSSEIHRTLPSR-----TELLRS-VLAADLVGFHTYDYARHFVS 315 (942)
Q Consensus 242 ~~DiIwvHDyhL~llp~~Lr~~~p~~~I~~flH~PfP~~e~fr~lp~r-----~~il~~-ll~aDlIgF~t~~~~~~Fl~ 315 (942)
++|+||+|.++...+..+... +.++.+++|.+++.........+. ..+... ...+|.|..-+...++.+.+
T Consensus 80 ~~DiVh~~~~~~~~~~~~~~~---~~~~v~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~vS~~~~~~l~~ 156 (177)
T PF13439_consen 80 KPDIVHIHGPPAFWIALLACR---KVPIVYTIHGPYFERRFLKSKLSPYSYLNFRIERKLYKKADRIIAVSESTKDELIK 156 (177)
T ss_dssp T-SEEECCTTHCCCHHHHHHH---CSCEEEEE-HHH--HHTTTTSCCCHHHHHHCTTHHHHCCSSEEEESSHHHHHHHHH
T ss_pred CCCeEEecccchhHHHHHhcc---CCCEEEEeCCCcccccccccccchhhhhhhhhhhhHHhcCCEEEEECHHHHHHHHH
Confidence 789999999887765543332 789999999977421111111111 111111 23567766555444333322
Q ss_pred HHHHHhccccCCCceecCCeeeEEEEeeCccCccccc
Q 002285 316 ACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFV 352 (942)
Q Consensus 316 ~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~ 352 (942)
++ -...++.++|||||.+.|+
T Consensus 157 -----~~-----------~~~~ki~vI~ngid~~~F~ 177 (177)
T PF13439_consen 157 -----FG-----------IPPEKIHVIYNGIDTDRFR 177 (177)
T ss_dssp -----HT-------------SS-EEE----B-CCCH-
T ss_pred -----hC-----------CcccCCEEEECCccHHHcC
Confidence 11 2347899999999999884
No 174
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=95.22 E-value=0.052 Score=55.46 Aligned_cols=61 Identities=13% Similarity=0.163 Sum_probs=46.7
Q ss_pred ccCCEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCC-hhhHHHhhcccCc
Q 002285 599 QSNNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSD-RNVLDDNFGEYNM 673 (942)
Q Consensus 599 ~s~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~-~~~L~~~~~~~~l 673 (942)
.-..+++++|+||||+.. ....+.+.+.+.|+.|.+ .|..++|+|+.+ ...++.++..+++
T Consensus 22 ~~~v~~vv~D~Dgtl~~~-------------~~~~~~pgv~e~L~~Lk~-~g~~l~I~Sn~~~~~~~~~~~~~~gl 83 (170)
T TIGR01668 22 KVGIKGVVLDKDNTLVYP-------------DHNEAYPALRDWIEELKA-AGRKLLIVSNNAGEQRAKAVEKALGI 83 (170)
T ss_pred HCCCCEEEEecCCccccC-------------CCCCcChhHHHHHHHHHH-cCCEEEEEeCCchHHHHHHHHHHcCC
Confidence 346689999999999976 233678899999999986 589999999998 4555555444443
No 175
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=95.12 E-value=0.066 Score=53.82 Aligned_cols=68 Identities=19% Similarity=0.189 Sum_probs=58.2
Q ss_pred hhcccCCEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccCceE
Q 002285 596 SYLQSNNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYNMWL 675 (942)
Q Consensus 596 ~y~~s~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l~l 675 (942)
..++...+-|++|+|-||++. .....+|++++-+.++.. .|..|+|+|--+..-+..+...+++.+
T Consensus 22 ~L~~~Gikgvi~DlDNTLv~w-------------d~~~~tpe~~~W~~e~k~-~gi~v~vvSNn~e~RV~~~~~~l~v~f 87 (175)
T COG2179 22 ILKAHGIKGVILDLDNTLVPW-------------DNPDATPELRAWLAELKE-AGIKVVVVSNNKESRVARAAEKLGVPF 87 (175)
T ss_pred HHHHcCCcEEEEeccCceecc-------------cCCCCCHHHHHHHHHHHh-cCCEEEEEeCCCHHHHHhhhhhcCCce
Confidence 345567789999999999998 345679999999999997 699999999999999999988888776
Q ss_pred Ee
Q 002285 676 AA 677 (942)
Q Consensus 676 ia 677 (942)
|.
T Consensus 88 i~ 89 (175)
T COG2179 88 IY 89 (175)
T ss_pred ee
Confidence 64
No 176
>PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long). This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall
Probab=95.01 E-value=1.9 Score=48.63 Aligned_cols=135 Identities=19% Similarity=0.171 Sum_probs=88.0
Q ss_pred cccccCCHHHHHHHHHHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCH
Q 002285 382 RLDMIKGIPQKILAFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDF 461 (942)
Q Consensus 382 RLd~~KGi~~lL~Af~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~ 461 (942)
.=|++-++...|+++.+.+. .+ +.++ +|- +.+..++++.++|.+.+.++ |+.. .+..+..+++.
T Consensus 193 Sgd~sNnHieaL~~L~~~~~--~~----~kIi---vPL-sYg~~n~~Yi~~V~~~~~~l---F~~~---~~~iL~e~mpf 256 (360)
T PF07429_consen 193 SGDPSNNHIEALEALKQQFG--DD----VKII---VPL-SYGANNQAYIQQVIQAGKEL---FGAE---NFQILTEFMPF 256 (360)
T ss_pred CCCCCccHHHHHHHHHHhcC--CC----eEEE---EEC-CCCCchHHHHHHHHHHHHHh---cCcc---ceeEhhhhCCH
Confidence 66888889888888776442 22 2222 121 22222456677787777665 3321 24457889999
Q ss_pred HHHHHHHHHccEEEECCCC-CCCChhHHHHHhhccCCCceEEEeCCCCcccccCCceEEE----CCCCHHHHHHHHHHHh
Q 002285 462 HALCALYAITDVALVTSLR-DGMNLVSYEFVACQASKKGVLILSEFAGAAQSLGAGAILV----NPWNITEVASSIGYAL 536 (942)
Q Consensus 462 ~el~aly~~ADv~v~pSl~-EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~lg~~gllV----nP~D~~~lA~aI~~aL 536 (942)
+|+.++++.+|++++...| .|+|..++ .+.+ +.++++|+-.-....+-.-++.| +.-|...+++|=+++.
T Consensus 257 ~eYl~lL~~cDl~if~~~RQQgiGnI~l-Ll~~----G~~v~L~~~np~~~~l~~~~ipVlf~~d~L~~~~v~ea~rql~ 331 (360)
T PF07429_consen 257 DEYLALLSRCDLGIFNHNRQQGIGNICL-LLQL----GKKVFLSRDNPFWQDLKEQGIPVLFYGDELDEALVREAQRQLA 331 (360)
T ss_pred HHHHHHHHhCCEEEEeechhhhHhHHHH-HHHc----CCeEEEecCChHHHHHHhCCCeEEeccccCCHHHHHHHHHHHh
Confidence 9999999999999999987 79987654 2344 35799998877776663334433 4456666666655554
Q ss_pred C
Q 002285 537 N 537 (942)
Q Consensus 537 ~ 537 (942)
.
T Consensus 332 ~ 332 (360)
T PF07429_consen 332 N 332 (360)
T ss_pred h
Confidence 3
No 177
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=94.73 E-value=0.07 Score=57.53 Aligned_cols=71 Identities=7% Similarity=0.008 Sum_probs=46.6
Q ss_pred ChhhhhhhhcccCCEEEEEecCCccCCCCCccCCCCCc---------c------------ccCCCCCChhHHHHHHHhhh
Q 002285 589 PIKGAVDSYLQSNNRLLILGFNATLTAPVDFLGRRGGQ---------I------------REMEPKLHPDLKEPLKRLCD 647 (942)
Q Consensus 589 ~~~~~~~~y~~s~~rLi~lD~DGTL~~~~~~P~~~~~~---------~------------~~~~~~~~~~~~~aL~~L~~ 647 (942)
+++++.+.....+...|.||+|||+++..+..- .+.+ + ......+-+.+++.|+.|.+
T Consensus 50 ~~~~~~~~~~~~~p~av~~DIDeTvldnsp~~~-~~~~~f~~~~~~y~~~~~fw~~y~~~~~~~a~p~~Ga~elL~~L~~ 128 (237)
T PRK11009 50 SVAQIEKSLEGRPPMAVGFDIDDTVLFSSPGFW-RGKKTFSPGSEDYLKNQKFWEKMNNGWDEFSIPKEVARQLIDMHVK 128 (237)
T ss_pred EHHHhhhhccCCCCcEEEEECcCccccCCchhe-eeeeccCCCcccccChHHHHHHHHhcccccCcchHHHHHHHHHHHH
Confidence 455556555444455899999999997432110 0000 0 01234566679999999986
Q ss_pred CCCCeEEEEcCCCh
Q 002285 648 DPMTTVVVLSGSDR 661 (942)
Q Consensus 648 d~g~~V~IvSGR~~ 661 (942)
.|..+++||||+.
T Consensus 129 -~G~~I~iVTnR~~ 141 (237)
T PRK11009 129 -RGDSIYFITGRTA 141 (237)
T ss_pred -CCCeEEEEeCCCC
Confidence 6999999999973
No 178
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=94.63 E-value=0.039 Score=55.94 Aligned_cols=53 Identities=11% Similarity=0.070 Sum_probs=38.2
Q ss_pred EEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCC
Q 002285 603 RLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGS 659 (942)
Q Consensus 603 rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR 659 (942)
+++|||.||||......+ ...+.+ ....+-|.+.++|++|.+ .|..++|+|..
T Consensus 2 ~~~~~d~dg~l~~~~~~~--~~~~~~-~~~~~~pgv~e~L~~L~~-~g~~l~IvSN~ 54 (161)
T TIGR01261 2 KILFIDRDGTLIEEPPSD--FQVDAL-EKLRFEKGVIPALLKLKK-AGYKFVMVTNQ 54 (161)
T ss_pred CEEEEeCCCCccccCCCc--cccCCH-HHeeECCCHHHHHHHHHH-CCCeEEEEeCC
Confidence 689999999999843211 111111 234577899999999997 58999999975
No 179
>cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=94.42 E-value=3.5 Score=51.64 Aligned_cols=150 Identities=13% Similarity=0.127 Sum_probs=102.8
Q ss_pred CCceEEEeecccccCCHHH-HHHHHHHhH--HhCCCCC-CcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcC
Q 002285 373 GRKVMLGVDRLDMIKGIPQ-KILAFEKFL--EENPSWR-DKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLT 448 (942)
Q Consensus 373 ~~~iIl~VgRLd~~KGi~~-lL~Af~~ll--~~~P~~~-~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~ 448 (942)
+..+++.+-|+..-|-... +|..+.++. ..+|+.. ..+++|.-|.+..++.. -+++-+.|..++..||..-...+
T Consensus 529 ~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~~-aK~iIklI~~va~~in~Dp~v~~ 607 (797)
T cd04300 529 DSLFDVQVKRIHEYKRQLLNVLHIIHLYNRIKENPNADIVPRTFIFGGKAAPGYYM-AKLIIKLINAVADVVNNDPDVGD 607 (797)
T ss_pred CccEEEEeeechhhhhhhhHHHhhHHHHHHHHhCCCcCCCCeEEEEeccCCCCcHH-HHHHHHHHHHHHHHhccChhcCC
Confidence 5567889999999998887 666655443 3355421 12556655555545543 24566778888888887544445
Q ss_pred cccEEEeCCCCCHHHHHHHHHHccEEEECCCC--CCCChhHHHHHhhccCCCceEEEeCCCCccccc----C-CceEEEC
Q 002285 449 TVPIHHLDRSLDFHALCALYAITDVALVTSLR--DGMNLVSYEFVACQASKKGVLILSEFAGAAQSL----G-AGAILVN 521 (942)
Q Consensus 449 ~~pV~~l~~~v~~~el~aly~~ADv~v~pSl~--EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l----g-~~gllVn 521 (942)
...|+|+. ..+-.--..++.+|||-...|++ |.-|..-+=||.- |.+.+|..-|+..++ | .+++++-
T Consensus 608 ~lkVVFle-nY~VslAe~iipaaDvseqis~ag~EASGTsnMK~~lN-----GaltlgtlDGanvEi~e~vG~eN~fiFG 681 (797)
T cd04300 608 KLKVVFLP-NYNVSLAEKIIPAADLSEQISTAGKEASGTGNMKFMLN-----GALTIGTLDGANVEIAEEVGEENIFIFG 681 (797)
T ss_pred ceEEEEeC-CCChHHHHHhhhhhhhhhhCCCCCccccCCchhhHHhc-----CceeeecccchhHHHHHHhCcCcEEEeC
Confidence 55688775 34556666789999999999984 7777777788774 999999998887665 3 5788875
Q ss_pred CCCHHHHHH
Q 002285 522 PWNITEVAS 530 (942)
Q Consensus 522 P~D~~~lA~ 530 (942)
. +.+++.+
T Consensus 682 ~-~~~ev~~ 689 (797)
T cd04300 682 L-TAEEVEA 689 (797)
T ss_pred C-CHHHHHH
Confidence 3 4555543
No 180
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=94.26 E-value=0.027 Score=52.47 Aligned_cols=54 Identities=15% Similarity=0.215 Sum_probs=38.4
Q ss_pred EEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCCh---hhHHHhhcccCce
Q 002285 605 LILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDR---NVLDDNFGEYNMW 674 (942)
Q Consensus 605 i~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~---~~L~~~~~~~~l~ 674 (942)
|+||+||||... ..+-|.+.++|++|.+ .|.+++++|-.+. ..+.+.+..+++.
T Consensus 1 ~l~D~dGvl~~g---------------~~~ipga~e~l~~L~~-~g~~~~~lTNns~~s~~~~~~~L~~~Gi~ 57 (101)
T PF13344_consen 1 FLFDLDGVLYNG---------------NEPIPGAVEALDALRE-RGKPVVFLTNNSSRSREEYAKKLKKLGIP 57 (101)
T ss_dssp EEEESTTTSEET---------------TEE-TTHHHHHHHHHH-TTSEEEEEES-SSS-HHHHHHHHHHTTTT
T ss_pred CEEeCccEeEeC---------------CCcCcCHHHHHHHHHH-cCCCEEEEeCCCCCCHHHHHHHHHhcCcC
Confidence 689999999974 2456889999999998 5899999987654 4444444444444
No 181
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=94.17 E-value=0.041 Score=55.67 Aligned_cols=53 Identities=15% Similarity=0.262 Sum_probs=32.9
Q ss_pred EEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcC
Q 002285 603 RLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSG 658 (942)
Q Consensus 603 rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSG 658 (942)
|+.+||+||||+.... +..-.+-+.+-.-.++.+.++|++|.+ .|..|+|+|-
T Consensus 1 Kia~fD~DgTLi~~~s--~~~f~~~~~D~~~~~~~v~~~L~~l~~-~Gy~IvIvTN 53 (159)
T PF08645_consen 1 KIAFFDLDGTLIKTKS--GKKFPKDPDDWKFFPPGVPEALRELHK-KGYKIVIVTN 53 (159)
T ss_dssp SEEEE-SCTTTEE-ST--STTS-SSTCGGEEC-TTHHHHHHHHHH-TTEEEEEEEE
T ss_pred CEEEEeCCCCccCCCC--CCcCcCCHHHhhhcchhHHHHHHHHHh-cCCeEEEEeC
Confidence 5789999999986521 000001111122356789999999987 5999999985
No 182
>PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A.
Probab=94.11 E-value=0.13 Score=50.08 Aligned_cols=84 Identities=18% Similarity=0.102 Sum_probs=42.5
Q ss_pred CCCCEEEEcCCchhhHHHHHHhhCCCCeEEEEeccCCCChhHhhcCCchHH----HH-HHhhhccEEeecCHHHHHHHHH
Q 002285 241 EEGDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSSEIHRTLPSRTE----LL-RSVLAADLVGFHTYDYARHFVS 315 (942)
Q Consensus 241 ~~~DiIwvHDyhL~llp~~Lr~~~p~~~I~~flH~PfP~~e~fr~lp~r~~----il-~~ll~aDlIgF~t~~~~~~Fl~ 315 (942)
.++|+||+|+++..++..++++. .++|+.+.+|..+.... .++... +. ..+..||.|...+....+.+.+
T Consensus 72 ~~~Dvv~~~~~~~~~~~~~~~~~-~~~p~v~~~h~~~~~~~----~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~l~~ 146 (160)
T PF13579_consen 72 ERPDVVHAHSPTAGLVAALARRR-RGIPLVVTVHGTLFRRG----SRWKRRLYRWLERRLLRRADRVIVVSEAMRRYLRR 146 (160)
T ss_dssp ---SEEEEEHHHHHHHHHHHHHH-HT--EEEE-SS-T----------HHHHHHHHHHHHHHHH-SEEEESSHHHHHHHHH
T ss_pred cCCeEEEecccchhHHHHHHHHc-cCCcEEEEECCCchhhc----cchhhHHHHHHHHHHHhcCCEEEECCHHHHHHHHH
Confidence 48899999998877777777633 37999999997543211 112111 22 3344688888888766665543
Q ss_pred HHHHHhccccCCCceecCCeeeEEEEeeCc
Q 002285 316 ACTRILGLEGTPEGVEDQGRLTRVAAFPIG 345 (942)
Q Consensus 316 ~~~r~l~~~~~~~~i~~~gr~~~v~viP~G 345 (942)
++....+|.++|||
T Consensus 147 ----------------~g~~~~ri~vipnG 160 (160)
T PF13579_consen 147 ----------------YGVPPDRIHVIPNG 160 (160)
T ss_dssp ----------------H---GGGEEE----
T ss_pred ----------------hCCCCCcEEEeCcC
Confidence 12235688999997
No 183
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=93.98 E-value=0.32 Score=51.74 Aligned_cols=34 Identities=12% Similarity=-0.006 Sum_probs=27.1
Q ss_pred HHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcC
Q 002285 782 AAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFE 822 (942)
Q Consensus 782 ~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~ 822 (942)
..+..+++.++ .+++.++++|| ..+|..|=+.++
T Consensus 149 ~~l~~~~~~~~------~~~~~~l~VGD-s~~Di~aA~~Ag 182 (220)
T COG0546 149 EPLLLLLEKLG------LDPEEALMVGD-SLNDILAAKAAG 182 (220)
T ss_pred HHHHHHHHHhC------CChhheEEECC-CHHHHHHHHHcC
Confidence 45566777777 34568999999 999999988886
No 184
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=93.93 E-value=0.1 Score=58.00 Aligned_cols=67 Identities=19% Similarity=0.125 Sum_probs=49.2
Q ss_pred CCEEEEEecCCccCCCCCc-cCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhccc
Q 002285 601 NNRLLILGFNATLTAPVDF-LGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEY 671 (942)
Q Consensus 601 ~~rLi~lD~DGTL~~~~~~-P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~ 671 (942)
+.+++++|+||||...... | .+-....+..+.+.+.++|++|.+ .|..++|+|||+....+..+..+
T Consensus 157 ~~~~~~~D~dgtl~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~l~~-~g~~i~i~T~r~~~~~~~~l~~l 224 (300)
T PHA02530 157 LPKAVIFDIDGTLAKMGGRSP---YDWTKVKEDKPNPMVVELVKMYKA-AGYEIIVVSGRDGVCEEDTVEWL 224 (300)
T ss_pred CCCEEEEECCCcCcCCCCCCc---cchhhcccCCCChhHHHHHHHHHh-CCCEEEEEeCCChhhHHHHHHHH
Confidence 4578999999999986431 0 000001244678999999999987 59999999999998887766654
No 185
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=93.83 E-value=0.088 Score=60.04 Aligned_cols=55 Identities=13% Similarity=0.093 Sum_probs=40.6
Q ss_pred CCEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCC
Q 002285 601 NNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGS 659 (942)
Q Consensus 601 ~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR 659 (942)
+++++|||.||||+...... ...+.+ ....+.|.+.+.|..|.+ .|.+++|+|+.
T Consensus 1 ~~k~l~lDrDgtl~~~~~~~--y~~~~~-~~~~l~pGV~e~L~~Lk~-~G~kL~IvTNq 55 (354)
T PRK05446 1 MQKILFIDRDGTLIEEPPTD--FQVDSL-DKLAFEPGVIPALLKLQK-AGYKLVMVTNQ 55 (354)
T ss_pred CCcEEEEeCCCCccCCCCcc--ccccCc-ccceECcCHHHHHHHHHh-CCCeEEEEECC
Confidence 46899999999999863210 011111 356789999999999976 68999999984
No 186
>PRK14985 maltodextrin phosphorylase; Provisional
Probab=93.78 E-value=4.5 Score=50.60 Aligned_cols=150 Identities=13% Similarity=0.105 Sum_probs=101.3
Q ss_pred CCceEEEeecccccCCHHH-HHHHHHHhH--HhCCCCC-CcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcC
Q 002285 373 GRKVMLGVDRLDMIKGIPQ-KILAFEKFL--EENPSWR-DKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLT 448 (942)
Q Consensus 373 ~~~iIl~VgRLd~~KGi~~-lL~Af~~ll--~~~P~~~-~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~ 448 (942)
+..+++++-|+..-|-... +|..+.++. ..+|+.. .-+++|.-|....++.. -+.+-+.|..++..||..-...+
T Consensus 528 ~slfdvq~kR~heYKRq~Lnil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~~-aK~iIklI~~va~~in~Dp~v~~ 606 (798)
T PRK14985 528 QAIFDVQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGYYL-AKNIIFAINKVAEVINNDPLVGD 606 (798)
T ss_pred hhcchhhHhhhhhhhhhhhHhhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCcHH-HHHHHHHHHHHHHHhcCChhhCC
Confidence 4456778999999998777 666655543 2356521 12556655555545543 24566778888888876544344
Q ss_pred cccEEEeCCCCCHHHHHHHHHHccEEEECCCC--CCCChhHHHHHhhccCCCceEEEeCCCCccccc-----CCceEEEC
Q 002285 449 TVPIHHLDRSLDFHALCALYAITDVALVTSLR--DGMNLVSYEFVACQASKKGVLILSEFAGAAQSL-----GAGAILVN 521 (942)
Q Consensus 449 ~~pV~~l~~~v~~~el~aly~~ADv~v~pSl~--EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l-----g~~gllVn 521 (942)
...|+|+. ..+-.--..++.+|||-.-.|++ |.-|..-+=||.- |++.+|..-|+.-++ +.+++++-
T Consensus 607 ~lkVVFle-nY~VslAe~lipaaDvseqis~ag~EASGTsnMK~amN-----GaLtlgtlDGanvEi~e~vG~eN~f~fG 680 (798)
T PRK14985 607 KLKVVFLP-DYCVSAAELLIPAADISEQISTAGKEASGTGNMKLALN-----GALTVGTLDGANVEIAEQVGEENIFIFG 680 (798)
T ss_pred ceeEEEeC-CCChHHHHHHhhhhhhhhhCCCCCccccCcchhHHHhc-----CceeeecccchHHHHHHHhCcCcEEEeC
Confidence 45688765 45566667889999999999984 7777777777774 999999999986554 46788886
Q ss_pred CCCHHHHHH
Q 002285 522 PWNITEVAS 530 (942)
Q Consensus 522 P~D~~~lA~ 530 (942)
. +.+++.+
T Consensus 681 ~-~~~ev~~ 688 (798)
T PRK14985 681 H-TVEQVKA 688 (798)
T ss_pred C-CHHHHHH
Confidence 4 3555443
No 187
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=93.75 E-value=0.083 Score=54.31 Aligned_cols=53 Identities=19% Similarity=0.073 Sum_probs=39.1
Q ss_pred CEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCC
Q 002285 602 NRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSD 660 (942)
Q Consensus 602 ~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~ 660 (942)
.|+++||.||||...... ..... ....+-|.+.++|++|.+ .|..++|+|..+
T Consensus 3 ~~~~~~d~~~t~~~~~~~---~~~~~--~~~~~~pgv~e~L~~Lk~-~g~~l~I~Tn~~ 55 (181)
T PRK08942 3 MKAIFLDRDGVINVDSDG---YVKSP--DEWIPIPGSIEAIARLKQ-AGYRVVVATNQS 55 (181)
T ss_pred ccEEEEECCCCcccCCcc---ccCCH--HHeEECCCHHHHHHHHHH-CCCEEEEEeCCc
Confidence 479999999999755311 11111 134577899999999997 589999999876
No 188
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=93.48 E-value=0.21 Score=50.94 Aligned_cols=66 Identities=21% Similarity=0.224 Sum_probs=49.2
Q ss_pred hcccCCEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCC-eEEEEcCCC-------hhhHHHhh
Q 002285 597 YLQSNNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMT-TVVVLSGSD-------RNVLDDNF 668 (942)
Q Consensus 597 y~~s~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~-~V~IvSGR~-------~~~L~~~~ 668 (942)
.++...|.|+||.|.||++. ....++++..+.+.++.+.-+. .|+|+|-.. ...++.+-
T Consensus 36 Lk~~Gik~li~DkDNTL~~~-------------~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~ 102 (168)
T PF09419_consen 36 LKKKGIKALIFDKDNTLTPP-------------YEDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALE 102 (168)
T ss_pred hhhcCceEEEEcCCCCCCCC-------------CcCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHH
Confidence 56778899999999999986 3567899999999999975332 599999873 44455544
Q ss_pred cccCceE
Q 002285 669 GEYNMWL 675 (942)
Q Consensus 669 ~~~~l~l 675 (942)
..+++.+
T Consensus 103 ~~lgIpv 109 (168)
T PF09419_consen 103 KALGIPV 109 (168)
T ss_pred HhhCCcE
Confidence 4445443
No 189
>PRK06769 hypothetical protein; Validated
Probab=93.24 E-value=0.09 Score=53.85 Aligned_cols=53 Identities=13% Similarity=0.154 Sum_probs=39.2
Q ss_pred cCCEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCC
Q 002285 600 SNNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSD 660 (942)
Q Consensus 600 s~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~ 660 (942)
+..|+|++|.||||.....-. ......+-|.+.+.|++|.+ .|.+++|+|+.+
T Consensus 2 ~~~~~~~~d~d~~~~~~~~~~-------~~~~~~~~pgv~e~L~~Lk~-~G~~l~I~Tn~~ 54 (173)
T PRK06769 2 TNIQAIFIDRDGTIGGDTTIH-------YPGSFTLFPFTKASLQKLKA-NHIKIFSFTNQP 54 (173)
T ss_pred CCCcEEEEeCCCcccCCCCCC-------CHHHeEECCCHHHHHHHHHH-CCCEEEEEECCc
Confidence 356899999999997552100 00234567899999999987 589999999864
No 190
>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A.
Probab=93.15 E-value=2.5 Score=49.95 Aligned_cols=172 Identities=13% Similarity=0.112 Sum_probs=89.1
Q ss_pred CCceEEEeecccccCCHHHHHHHHHHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccE
Q 002285 373 GRKVMLGVDRLDMIKGIPQKILAFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPI 452 (942)
Q Consensus 373 ~~~iIl~VgRLd~~KGi~~lL~Af~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV 452 (942)
+..++.+..++ .|=-+..++.+.++|+.-|+-+ |++...+. .+. +.+.+.+.+. |. +-..|
T Consensus 284 d~vvF~~fn~~--~KI~p~~l~~W~~IL~~vP~S~----L~L~~~~~--~~~------~~l~~~~~~~----Gv-~~~Ri 344 (468)
T PF13844_consen 284 DAVVFGSFNNL--FKISPETLDLWARILKAVPNSR----LWLLRFPA--SGE------ARLRRRFAAH----GV-DPDRI 344 (468)
T ss_dssp SSEEEEE-S-G--GG--HHHHHHHHHHHHHSTTEE----EEEEETST--THH------HHHHHHHHHT----TS--GGGE
T ss_pred CceEEEecCcc--ccCCHHHHHHHHHHHHhCCCcE----EEEeeCCH--HHH------HHHHHHHHHc----CC-ChhhE
Confidence 44455555655 4667899999999999999854 44334332 121 2333333332 21 11236
Q ss_pred EEeCCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhccCCCceEEEeCCCCc-cc-----cc---CCceEEECCC
Q 002285 453 HHLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGA-AQ-----SL---GAGAILVNPW 523 (942)
Q Consensus 453 ~~l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~-~~-----~l---g~~gllVnP~ 523 (942)
+| .+..+.++....|+.+||+|-|..+-| +.+.+||+.+ |++|+|-.+-. +. .| |-.-++. .
T Consensus 345 ~f-~~~~~~~ehl~~~~~~DI~LDT~p~nG-~TTt~dALwm-----GVPvVTl~G~~~~sR~~aSiL~~lGl~ElIA--~ 415 (468)
T PF13844_consen 345 IF-SPVAPREEHLRRYQLADICLDTFPYNG-GTTTLDALWM-----GVPVVTLPGETMASRVGASILRALGLPELIA--D 415 (468)
T ss_dssp EE-EE---HHHHHHHGGG-SEEE--SSS---SHHHHHHHHH-----T--EEB---SSGGGSHHHHHHHHHT-GGGB---S
T ss_pred EE-cCCCCHHHHHHHhhhCCEEeeCCCCCC-cHHHHHHHHc-----CCCEEeccCCCchhHHHHHHHHHcCCchhcC--C
Confidence 65 446678899999999999999977766 5688999999 88888743311 11 11 3222222 3
Q ss_pred CHHHHHHHHHHHhCCCHHHHHHHHHHHhHHH---HhcCHHHHHHHHHHHHHHh
Q 002285 524 NITEVASSIGYALNMPADEREKRHLHNFMHV---TTHTSQEWAATFVSELNDT 573 (942)
Q Consensus 524 D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v---~~~~~~~W~~~fl~~L~~~ 573 (942)
|.++..+.-.++.++ ++.++...++.++.+ .-++...|+++|...+...
T Consensus 416 s~~eYv~~Av~La~D-~~~l~~lR~~Lr~~~~~SpLfd~~~~ar~lE~a~~~m 467 (468)
T PF13844_consen 416 SEEEYVEIAVRLATD-PERLRALRAKLRDRRSKSPLFDPKRFARNLEAAYRQM 467 (468)
T ss_dssp SHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHSGGG-HHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhCC-HHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHHHHHHh
Confidence 555555544444443 334444444444443 2367888888887776654
No 191
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=93.01 E-value=0.14 Score=61.26 Aligned_cols=55 Identities=13% Similarity=0.197 Sum_probs=39.8
Q ss_pred cCCEEEEEecCCccCCCCC---ccCCCCCccccCCC-CCChhHHHHHHHhhhCCCCeEEEEcCCCh
Q 002285 600 SNNRLLILGFNATLTAPVD---FLGRRGGQIREMEP-KLHPDLKEPLKRLCDDPMTTVVVLSGSDR 661 (942)
Q Consensus 600 s~~rLi~lD~DGTL~~~~~---~P~~~~~~~~~~~~-~~~~~~~~aL~~L~~d~g~~V~IvSGR~~ 661 (942)
...|++|||+||||..... .| . -+ .+- .+.|.+.+.|++|.+ .|..++|+|..+-
T Consensus 166 ~~~Kia~fD~DGTLi~t~sg~~~~----~-~~-~d~~~l~pgV~e~L~~L~~-~Gy~IvIvTNQ~g 224 (526)
T TIGR01663 166 GQEKIAGFDLDGTIIKTKSGKVFP----K-GP-DDWQIIFPEIPEKLKELEA-DGFKICIFTNQGG 224 (526)
T ss_pred ccCcEEEEECCCCccccCCCccCC----C-CH-HHeeecccCHHHHHHHHHH-CCCEEEEEECCcc
Confidence 4568999999999996421 11 0 00 122 257899999999987 6999999998655
No 192
>PLN02954 phosphoserine phosphatase
Probab=92.98 E-value=0.13 Score=54.46 Aligned_cols=34 Identities=18% Similarity=0.081 Sum_probs=27.2
Q ss_pred CCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHh
Q 002285 778 VTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTF 820 (942)
Q Consensus 778 vnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~ 820 (942)
-.|..+++++++.++ .+.+++||| ..+|..|-++
T Consensus 154 ~~K~~~i~~~~~~~~--------~~~~i~iGD-s~~Di~aa~~ 187 (224)
T PLN02954 154 GGKAEAVQHIKKKHG--------YKTMVMIGD-GATDLEARKP 187 (224)
T ss_pred ccHHHHHHHHHHHcC--------CCceEEEeC-CHHHHHhhhc
Confidence 468889999888765 357899999 9999998444
No 193
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=92.97 E-value=0.15 Score=55.07 Aligned_cols=55 Identities=15% Similarity=0.246 Sum_probs=41.6
Q ss_pred CEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHH--HhhcccC
Q 002285 602 NRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLD--DNFGEYN 672 (942)
Q Consensus 602 ~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~--~~~~~~~ 672 (942)
.++++||+||||... ..+.|.+.++|++|.+ .|.+++|+|..+....+ +.+..++
T Consensus 8 ~~~~~~D~dG~l~~~---------------~~~~pga~e~L~~L~~-~G~~~~ivTN~~~~~~~~~~~L~~~g 64 (242)
T TIGR01459 8 YDVFLLDLWGVIIDG---------------NHTYPGAVQNLNKIIA-QGKPVYFVSNSPRNIFSLHKTLKSLG 64 (242)
T ss_pred CCEEEEecccccccC---------------CccCccHHHHHHHHHH-CCCEEEEEeCCCCChHHHHHHHHHCC
Confidence 468999999999864 2467899999999997 59999999876654433 4455443
No 194
>PTZ00445 p36-lilke protein; Provisional
Probab=92.82 E-value=0.22 Score=52.30 Aligned_cols=68 Identities=19% Similarity=0.148 Sum_probs=48.6
Q ss_pred hhhhhhhhcccCCEEEEEecCCccCCCC----CccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCCh
Q 002285 590 IKGAVDSYLQSNNRLLILGFNATLTAPV----DFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDR 661 (942)
Q Consensus 590 ~~~~~~~y~~s~~rLi~lD~DGTL~~~~----~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~ 661 (942)
++.+++.+++...|+|++|+|-||++.- .+|. .........++|+.+..+.+|.+ .+..|+|||=-+.
T Consensus 31 ~~~~v~~L~~~GIk~Va~D~DnTlI~~HsgG~~~~~---~~~~~~~~~~tpefk~~~~~l~~-~~I~v~VVTfSd~ 102 (219)
T PTZ00445 31 ADKFVDLLNECGIKVIASDFDLTMITKHSGGYIDPD---NDDIRVLTSVTPDFKILGKRLKN-SNIKISVVTFSDK 102 (219)
T ss_pred HHHHHHHHHHcCCeEEEecchhhhhhhhcccccCCC---cchhhhhccCCHHHHHHHHHHHH-CCCeEEEEEccch
Confidence 5567778889999999999999999821 1110 00000123478999999999986 6999999986544
No 195
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=92.45 E-value=0.57 Score=57.02 Aligned_cols=65 Identities=17% Similarity=0.326 Sum_probs=49.8
Q ss_pred hcccCCEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCC-CeEEEEcCCChhhHHHhhcccCc
Q 002285 597 YLQSNNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPM-TTVVVLSGSDRNVLDDNFGEYNM 673 (942)
Q Consensus 597 y~~s~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g-~~V~IvSGR~~~~L~~~~~~~~l 673 (942)
+.....+.+++..||+++.... ....+-|++.++|+.|.+ .| ..++|+||.+....+...+.+++
T Consensus 359 ~~~~g~~~~~v~~~~~~~g~i~-----------~~d~~~~g~~e~l~~L~~-~g~i~v~ivTgd~~~~a~~i~~~lgi 424 (556)
T TIGR01525 359 GESQGKTVVFVAVDGELLGVIA-----------LRDQLRPEAKEAIAALKR-AGGIKLVMLTGDNRSAAEAVAAELGI 424 (556)
T ss_pred HhhCCcEEEEEEECCEEEEEEE-----------ecccchHhHHHHHHHHHH-cCCCeEEEEeCCCHHHHHHHHHHhCC
Confidence 3344567888889998776422 234578999999999987 57 99999999999988887776544
No 196
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=92.44 E-value=0.18 Score=54.30 Aligned_cols=50 Identities=20% Similarity=0.280 Sum_probs=40.9
Q ss_pred EEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEc---CCChhhHHHhhcc
Q 002285 605 LILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLS---GSDRNVLDDNFGE 670 (942)
Q Consensus 605 i~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvS---GR~~~~L~~~~~~ 670 (942)
++||+||||.+. . .+.+.+.++|+.|.+ .+.+++++| ||+...+.+.+..
T Consensus 1 ~lfD~DGvL~~~--------------~-~~~~~a~e~i~~l~~-~g~~~~~~tN~~~~~~~~~~~~l~~ 53 (236)
T TIGR01460 1 FLFDIDGVLWLG--------------H-KPIPGAAEALNRLRA-KGKPVVFLTNNSSRSEEDYAEKLSS 53 (236)
T ss_pred CEEeCcCccCcC--------------C-ccCcCHHHHHHHHHH-CCCeEEEEECCCCCCHHHHHHHHHH
Confidence 578999999985 1 235589999999987 588999998 9999988877766
No 197
>TIGR03492 conserved hypothetical protein. This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.
Probab=92.24 E-value=6 Score=46.09 Aligned_cols=135 Identities=16% Similarity=0.192 Sum_probs=76.8
Q ss_pred Eeecc-cccCCHHHHHHHHHHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhcc---------ccCCcC
Q 002285 379 GVDRL-DMIKGIPQKILAFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRING---------RYGTLT 448 (942)
Q Consensus 379 ~VgRL-d~~KGi~~lL~Af~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~---------~~~~~~ 448 (942)
.-.|- +-.++++.+++|++.+.++ |+ +.++....+. ..+..+++.+.+. .++. .|..
T Consensus 212 pGSR~ae~~~~lp~~l~al~~L~~~-~~----~~~v~~~~~~----~~~~~~~~~l~~~--g~~~~~~~~~~~~~~~~-- 278 (396)
T TIGR03492 212 PGSRPPEAYRNLKLLLRALEALPDS-QP----FVFLAAIVPS----LSLEKLQAILEDL--GWQLEGSSEDQTSLFQK-- 278 (396)
T ss_pred CCCCHHHHHccHHHHHHHHHHHhhC-CC----eEEEEEeCCC----CCHHHHHHHHHhc--CceecCCccccchhhcc--
Confidence 34463 4457889999999998655 55 3444333222 2233343333221 1110 0000
Q ss_pred cccEEEeCCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhccCCCceEEEeCCCCc------ccc---cCCceEE
Q 002285 449 TVPIHHLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGA------AQS---LGAGAIL 519 (942)
Q Consensus 449 ~~pV~~l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~------~~~---lg~~gll 519 (942)
..+.++. ...++..+|+.||++|..| |-+..|+++++ .|.|+--+.+- .+. +-..++.
T Consensus 279 -~~~~v~~---~~~~~~~~l~~ADlvI~rS-----Gt~T~E~a~lg----~P~Ilip~~~~q~na~~~~~~~~l~g~~~~ 345 (396)
T TIGR03492 279 -GTLEVLL---GRGAFAEILHWADLGIAMA-----GTATEQAVGLG----KPVIQLPGKGPQFTYGFAEAQSRLLGGSVF 345 (396)
T ss_pred -CceEEEe---chHhHHHHHHhCCEEEECc-----CHHHHHHHHhC----CCEEEEeCCCCHHHHHHHHhhHhhcCCEEe
Confidence 0122211 2467899999999999986 35669999982 45555542221 011 1024555
Q ss_pred ECCCCHHHHHHHHHHHhCCC
Q 002285 520 VNPWNITEVASSIGYALNMP 539 (942)
Q Consensus 520 VnP~D~~~lA~aI~~aL~m~ 539 (942)
+...+.+.++++|..+|+++
T Consensus 346 l~~~~~~~l~~~l~~ll~d~ 365 (396)
T TIGR03492 346 LASKNPEQAAQVVRQLLADP 365 (396)
T ss_pred cCCCCHHHHHHHHHHHHcCH
Confidence 66678899999999999753
No 198
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=92.20 E-value=0.37 Score=49.31 Aligned_cols=37 Identities=27% Similarity=0.414 Sum_probs=30.5
Q ss_pred hhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccCc
Q 002285 636 PDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYNM 673 (942)
Q Consensus 636 ~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l 673 (942)
+++.+.|+.|.+ .+..|+|+||-....++.++..+++
T Consensus 92 ~~~~e~i~~~~~-~~~~v~IvS~~~~~~i~~~~~~~~i 128 (192)
T PF12710_consen 92 PDAMELIRELKD-NGIKVVIVSGSPDEIIEPIAERLGI 128 (192)
T ss_dssp TTHHHHHHHHHH-TTSEEEEEEEEEHHHHHHHHHHTTS
T ss_pred hhHHHHHHHHHH-CCCEEEEECCCcHHHHHHHHHHcCC
Confidence 667899999876 5999999999988888888765544
No 199
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=92.02 E-value=0.2 Score=53.62 Aligned_cols=69 Identities=14% Similarity=0.197 Sum_probs=47.3
Q ss_pred CCEEEEEecCCccCCCCCccCC--CCC------c----cccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhh---HH
Q 002285 601 NNRLLILGFNATLTAPVDFLGR--RGG------Q----IREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNV---LD 665 (942)
Q Consensus 601 ~~rLi~lD~DGTL~~~~~~P~~--~~~------~----~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~---L~ 665 (942)
.+-+++||+|-|+++..+.-.. .+. . +....+..-|.++++++.|.+ .|..|+++|||+... ..
T Consensus 76 g~~A~V~DIDET~LsN~py~~~~~~g~~~~~~~~~~~wv~~~~apaip~al~l~~~l~~-~G~~Vf~lTGR~e~~r~~T~ 154 (229)
T TIGR01675 76 GMDAWIFDVDDTLLSNIPYYKKHGYGTEKTDPTAFWLWLGKGAAPALPEGLKLYQKIIE-LGIKIFLLSGRWEELRNATL 154 (229)
T ss_pred CCcEEEEccccccccCHHHHHHhccCCCcCCHHHHHHHHHcCCCCCCHHHHHHHHHHHH-CCCEEEEEcCCChHHHHHHH
Confidence 4568999999999986321100 000 0 112455677899999999987 699999999999765 44
Q ss_pred Hhhcc
Q 002285 666 DNFGE 670 (942)
Q Consensus 666 ~~~~~ 670 (942)
+++..
T Consensus 155 ~nL~~ 159 (229)
T TIGR01675 155 DNLIN 159 (229)
T ss_pred HHHHH
Confidence 45444
No 200
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=91.99 E-value=0.25 Score=51.50 Aligned_cols=38 Identities=21% Similarity=0.138 Sum_probs=27.3
Q ss_pred CCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccC
Q 002285 633 KLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYN 672 (942)
Q Consensus 633 ~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~ 672 (942)
.+.|.+.+.|..|.+ . ..++|+||.....++.++..++
T Consensus 68 ~~~pg~~e~L~~L~~-~-~~~~IvS~~~~~~~~~~l~~~g 105 (205)
T PRK13582 68 DPLPGAVEFLDWLRE-R-FQVVILSDTFYEFAGPLMRQLG 105 (205)
T ss_pred CCCCCHHHHHHHHHh-c-CCEEEEeCCcHHHHHHHHHHcC
Confidence 345777788888876 3 6788888888887777666543
No 201
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=91.80 E-value=0.32 Score=51.27 Aligned_cols=38 Identities=13% Similarity=0.083 Sum_probs=32.4
Q ss_pred CHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCc
Q 002285 779 TKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 779 nKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
.|+..++.++++++ .+++.+++||| +.+|.+|.+.++.
T Consensus 152 ~k~~~~~~~~~~~~------~~~~~~i~iGD-s~~Di~aa~~ag~ 189 (219)
T TIGR00338 152 YKGKTLLILLRKEG------ISPENTVAVGD-GANDLSMIKAAGL 189 (219)
T ss_pred ccHHHHHHHHHHcC------CCHHHEEEEEC-CHHHHHHHHhCCC
Confidence 47889999999887 56788999999 9999999888854
No 202
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=91.64 E-value=0.22 Score=54.70 Aligned_cols=73 Identities=10% Similarity=0.175 Sum_probs=48.0
Q ss_pred cCCEEEEEecCCccCCCCCccC-----CCC---Cc----cccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHH--
Q 002285 600 SNNRLLILGFNATLTAPVDFLG-----RRG---GQ----IREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLD-- 665 (942)
Q Consensus 600 s~~rLi~lD~DGTL~~~~~~P~-----~~~---~~----~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~-- 665 (942)
.++.+|+||+|+|+++..+.-+ ..+ .. .......+-|.+.+.|+.|.+ .|..++|+|+|+....+
T Consensus 73 ~kp~AVV~DIDeTvLdns~y~~~~~~~~~~~~~~~w~~wv~~~~a~~ipGA~e~L~~L~~-~G~~v~iVTnR~~~~~~~T 151 (266)
T TIGR01533 73 DKKYAIVLDLDETVLDNSPYQGYQVLNNKPFDPETWDKWVQAAQAKPVAGALDFLNYANS-KGVKIFYVSNRSEKEKAAT 151 (266)
T ss_pred CCCCEEEEeCccccccChHHHHHHhcCCCcCCHHHHHHHHHcCCCCcCccHHHHHHHHHH-CCCeEEEEeCCCcchHHHH
Confidence 4567999999999997642100 000 00 011344567899999999987 59999999999855444
Q ss_pred -HhhcccCc
Q 002285 666 -DNFGEYNM 673 (942)
Q Consensus 666 -~~~~~~~l 673 (942)
.++...++
T Consensus 152 ~~~Lkk~Gi 160 (266)
T TIGR01533 152 LKNLKRFGF 160 (266)
T ss_pred HHHHHHcCc
Confidence 55554444
No 203
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=91.54 E-value=0.33 Score=48.33 Aligned_cols=70 Identities=20% Similarity=0.247 Sum_probs=48.6
Q ss_pred CCEEEEEecCCccCCCCCcc--CCC-CCc-c--------ccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhh
Q 002285 601 NNRLLILGFNATLTAPVDFL--GRR-GGQ-I--------REMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNF 668 (942)
Q Consensus 601 ~~rLi~lD~DGTL~~~~~~P--~~~-~~~-~--------~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~ 668 (942)
++++++||+||||+.....+ ... ..+ + ......+-|.+.+.|..|.+ +..++|+|+.+...++..+
T Consensus 1 ~k~~lvldld~tl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~pG~~e~L~~L~~--~~~l~I~Ts~~~~~~~~il 78 (148)
T smart00577 1 KKKTLVLDLDETLVHSTHRSFKEWTNRDFIVPVLIDGHPHGVYVKKRPGVDEFLKRASE--LFELVVFTAGLRMYADPVL 78 (148)
T ss_pred CCcEEEEeCCCCeECCCCCcCCCCCccceEEEEEeCCceEEEEEEECCCHHHHHHHHHh--ccEEEEEeCCcHHHHHHHH
Confidence 35789999999999864211 100 000 0 01223457899999999974 6999999999999998877
Q ss_pred cccC
Q 002285 669 GEYN 672 (942)
Q Consensus 669 ~~~~ 672 (942)
..++
T Consensus 79 ~~l~ 82 (148)
T smart00577 79 DLLD 82 (148)
T ss_pred HHhC
Confidence 7653
No 204
>PRK02797 4-alpha-L-fucosyltransferase; Provisional
Probab=91.46 E-value=22 Score=39.87 Aligned_cols=122 Identities=17% Similarity=0.188 Sum_probs=80.5
Q ss_pred eEEEee-cccccCCHHHHHHHHHHhHHhCCCCCCcEEEEE-EEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEE
Q 002285 376 VMLGVD-RLDMIKGIPQKILAFEKFLEENPSWRDKVVLIQ-IAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIH 453 (942)
Q Consensus 376 iIl~Vg-RLd~~KGi~~lL~Af~~ll~~~P~~~~~vvLvq-i~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~ 453 (942)
+.+-|| .=|++-.+.+.|+++.+.+.. + +.++. .+.|+ |+ +++.++|.+...++ |+.. .+.
T Consensus 147 ~tIlvGNSgd~SN~Hie~L~~l~~~~~~--~----v~ii~PlsYp~-gn----~~Yi~~V~~~~~~l---F~~~---~~~ 209 (322)
T PRK02797 147 MTILVGNSGDRSNRHIEALRALHQQFGD--N----VKIIVPMGYPA-NN----QAYIEEVRQAGLAL---FGAE---NFQ 209 (322)
T ss_pred eEEEEeCCCCCcccHHHHHHHHHHHhCC--C----eEEEEECCcCC-CC----HHHHHHHHHHHHHh---cCcc---cEE
Confidence 333344 668999999999999887643 2 33332 23332 22 34567777777665 4322 355
Q ss_pred EeCCCCCHHHHHHHHHHccEEEECCCC-CCCChhHHHHHhhccCCCceEEEeCCCCcccccCCceEE
Q 002285 454 HLDRSLDFHALCALYAITDVALVTSLR-DGMNLVSYEFVACQASKKGVLILSEFAGAAQSLGAGAIL 519 (942)
Q Consensus 454 ~l~~~v~~~el~aly~~ADv~v~pSl~-EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~lg~~gll 519 (942)
.+...++.+|..++++.+|+.++.=-| .|+|..++=-.. +.+++++.-.-....+-..|+-
T Consensus 210 ~L~e~l~f~eYl~lL~~~Dl~~f~~~RQQgiGnl~lLi~~-----G~~v~l~r~n~fwqdl~e~gv~ 271 (322)
T PRK02797 210 ILTEKLPFDDYLALLRQCDLGYFIFARQQGIGTLCLLIQL-----GKPVVLSRDNPFWQDLTEQGLP 271 (322)
T ss_pred ehhhhCCHHHHHHHHHhCCEEEEeechhhHHhHHHHHHHC-----CCcEEEecCCchHHHHHhCCCe
Confidence 678999999999999999999998776 899877654322 2468888766555555233443
No 205
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=91.31 E-value=0.18 Score=53.57 Aligned_cols=39 Identities=10% Similarity=0.068 Sum_probs=28.3
Q ss_pred CCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhccc
Q 002285 632 PKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEY 671 (942)
Q Consensus 632 ~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~ 671 (942)
..+.|.+.+.|+.|.+ .|..++|+||-....++.++..+
T Consensus 73 ~~l~pG~~e~l~~l~~-~g~~~~IvS~~~~~~i~~il~~~ 111 (219)
T PRK09552 73 AEIREGFHEFVQFVKE-NNIPFYVVSGGMDFFVYPLLQGL 111 (219)
T ss_pred CCcCcCHHHHHHHHHH-cCCeEEEECCCcHHHHHHHHHHh
Confidence 4567777778888765 57788888888777777766653
No 206
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=91.15 E-value=0.55 Score=51.36 Aligned_cols=64 Identities=13% Similarity=0.242 Sum_probs=43.1
Q ss_pred CCEEEEEecCCccCCCCCccCCC--C-C-----cc-----ccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHH
Q 002285 601 NNRLLILGFNATLTAPVDFLGRR--G-G-----QI-----REMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLD 665 (942)
Q Consensus 601 ~~rLi~lD~DGTL~~~~~~P~~~--~-~-----~~-----~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~ 665 (942)
.+-+++||+|+|+++..+.-... + . .. ....+..-|.+++..+.|.+ .|.+|+++|||+-..-.
T Consensus 100 ~~dA~V~DIDET~LsN~pY~~~~~~g~e~~~~~~w~~~Wv~~~~ApAlp~al~ly~~l~~-~G~kIf~VSgR~e~~r~ 176 (275)
T TIGR01680 100 EKDTFLFNIDGTALSNIPYYKKHGYGSEKFDSELYDEEFVNKGEAPALPETLKNYNKLVS-LGFKIIFLSGRLKDKQA 176 (275)
T ss_pred CCCEEEEECccccccCHHHHHHhcCCCCcCChhhhhHHHHhcccCCCChHHHHHHHHHHH-CCCEEEEEeCCchhHHH
Confidence 35689999999999643211100 0 0 01 11245567889999999987 69999999999865443
No 207
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=90.91 E-value=0.44 Score=49.00 Aligned_cols=71 Identities=17% Similarity=0.156 Sum_probs=49.2
Q ss_pred CEEEEEecCCccCCCCCcc-----CCCCCccc-------cCCCCCChhHHHHHHHhhhCCCCeEEEEcCC-ChhhHHHhh
Q 002285 602 NRLLILGFNATLTAPVDFL-----GRRGGQIR-------EMEPKLHPDLKEPLKRLCDDPMTTVVVLSGS-DRNVLDDNF 668 (942)
Q Consensus 602 ~rLi~lD~DGTL~~~~~~P-----~~~~~~~~-------~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR-~~~~L~~~~ 668 (942)
.||+.||.|+||....-.. -+..++.. .....+-|.+.++|+.|.+ .|..++|+|+. +...++..+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~elL~~Lk~-~G~~l~I~Sn~~~~~~~~~~L 80 (174)
T TIGR01685 2 PRVIVFDLDGTLWDHYMISLLGGPFKPVKQNNSIIIDKSGTEVTLIKEVRDVLQTLKD-AGTYLATASWNDVPEWAYEIL 80 (174)
T ss_pred CcEEEEeCCCCCcCcccccccCCCceeccCCCCeEEeCCCCEEEEcccHHHHHHHHHH-CCCEEEEEeCCCChHHHHHHH
Confidence 4799999999999763211 00011111 1234577899999999987 69999999998 787777776
Q ss_pred cccCc
Q 002285 669 GEYNM 673 (942)
Q Consensus 669 ~~~~l 673 (942)
+.+++
T Consensus 81 ~~~~l 85 (174)
T TIGR01685 81 GTFEI 85 (174)
T ss_pred HhCCc
Confidence 65543
No 208
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=90.59 E-value=37 Score=39.02 Aligned_cols=72 Identities=11% Similarity=0.097 Sum_probs=47.2
Q ss_pred eCCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhccCCCceEEEeCCCCc----cccc--CCceEEECCC--CHH
Q 002285 455 LDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGA----AQSL--GAGAILVNPW--NIT 526 (942)
Q Consensus 455 l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~----~~~l--g~~gllVnP~--D~~ 526 (942)
+.++++.. .+|..||++| ..-|+ -+..|++++ +-|+|+.-..+- +..+ ...|+.+++. +.+
T Consensus 292 ~~~~~p~~---~ll~~~d~~I---~hgG~-~t~~eal~~----GvP~v~~P~~~dQ~~~a~~~~~~G~g~~l~~~~~~~~ 360 (401)
T cd03784 292 VVDFVPHD---WLLPRCAAVV---HHGGA-GTTAAALRA----GVPQLVVPFFGDQPFWAARVAELGAGPALDPRELTAE 360 (401)
T ss_pred EeCCCCHH---HHhhhhheee---ecCCc-hhHHHHHHc----CCCEEeeCCCCCcHHHHHHHHHCCCCCCCCcccCCHH
Confidence 44566655 5578899999 44565 578999998 245555544431 2122 1235555554 689
Q ss_pred HHHHHHHHHhC
Q 002285 527 EVASSIGYALN 537 (942)
Q Consensus 527 ~lA~aI~~aL~ 537 (942)
+++++|.++|+
T Consensus 361 ~l~~al~~~l~ 371 (401)
T cd03784 361 RLAAALRRLLD 371 (401)
T ss_pred HHHHHHHHHhC
Confidence 99999999997
No 209
>PF06437 ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR009453 The Saccharomyces cerevisiae ISN1 (YOR155c) gene encodes an IMP-specific 5'-nucleotidase, which catalyses degradation of IMP to inosine as part of the purine salvage pathway.; GO: 0000287 magnesium ion binding, 0016791 phosphatase activity, 0009117 nucleotide metabolic process
Probab=90.39 E-value=13 Score=42.40 Aligned_cols=196 Identities=13% Similarity=0.144 Sum_probs=103.3
Q ss_pred ChhhhhhhhcccCCEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhh
Q 002285 589 PIKGAVDSYLQSNNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNF 668 (942)
Q Consensus 589 ~~~~~~~~y~~s~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~ 668 (942)
+..++..--+..+-+|+-||=|+||-++.. .-..+..++.-|-+|-+ .|..|.|||.-.+...+++.
T Consensus 134 N~AQi~al~~~~~L~LvTFDgDvTLY~DG~------------sl~~d~pvi~~ii~LL~-~gv~VgIVTAAGY~~a~kY~ 200 (408)
T PF06437_consen 134 NTAQIMALAKNYGLKLVTFDGDVTLYEDGA------------SLEPDNPVIPRIIKLLR-RGVKVGIVTAAGYPGAEKYE 200 (408)
T ss_pred HHHHHHHhcccCCceEEEEcCCcccccCCC------------CCCCCchHHHHHHHHHh-cCCeEEEEeCCCCCChHHHH
Confidence 333444433444779999999999999832 12235556666666665 59999999988877655443
Q ss_pred ccc-------------------Cc-eEEeecceEEEeC-----------CCceeecccCCCChhHH-HHHHHHH------
Q 002285 669 GEY-------------------NM-WLAAENGMFLRLT-----------TGEWMTTMPENLNMDWV-DSVKHVF------ 710 (942)
Q Consensus 669 ~~~-------------------~l-~liaehG~~ir~~-----------~~~w~~~~~~~~~~~w~-~~v~~il------ 710 (942)
..+ ++ .+-||.-+.++.. .+.|... .-..|. +.+.+++
T Consensus 201 ~RL~GLL~a~~~~~~Lt~~qk~~l~VMGGEsNYLfr~~~~~~~~L~~v~~~~W~~~----~m~~W~~~dI~~lLD~AE~~ 276 (408)
T PF06437_consen 201 ERLHGLLDAFKDSTDLTPEQKSNLYVMGGESNYLFRYDPESPHGLEFVPREEWLLP----EMKTWSEEDITELLDIAEAA 276 (408)
T ss_pred HHHHHHHHHHHhccCCCHHHhcCEEEecccceeEEEecCCCCCCeEEccHHhccCc----cccCcCHHHHHHHHHHHHHH
Confidence 321 11 3445555555532 1245321 112343 2233333
Q ss_pred -HHHHhc--CCCeeeeeecceEEEEEeccchHHhHHHHHH----HHHHHhcC-CCCCCCeEEEEcCc--EEEEEECCCCH
Q 002285 711 -EYFTER--TPRSHFEVRETSLVWNYKYADLEFGRLQARD----ILQHLWSG-PISNASVDVVQGGR--SVEVRAVGVTK 780 (942)
Q Consensus 711 -~~~~~r--~~Gs~iE~K~~sl~~hyr~ad~e~~~~qa~e----l~~~L~~~-~~~~~~v~v~~G~~--~vEV~p~gvnK 780 (942)
.....+ .| ..|-.|+-++-+--. ....+...|.+| +...|... .....++....|.. +|+| -||
T Consensus 277 L~~~~~~l~Lp-a~IiRK~RAVGivP~-~~~ki~rE~LEE~VL~vq~~L~~~~~~~~ipfCAFNGGsDVwVDI----GdK 350 (408)
T PF06437_consen 277 LRDCVKRLNLP-ATIIRKERAVGIVPK-PGVKIIREQLEEIVLTVQKTLEESPPGRRIPFCAFNGGSDVWVDI----GDK 350 (408)
T ss_pred HHHHHHHcCCC-eeEEeecceeeEecC-CCCcchhhhHHHHHHHHHHHHHhcCCCCCCceeeecCCcceEEEc----CCc
Confidence 222222 34 455666655543211 110111122222 22333111 11123566666533 3454 489
Q ss_pred HHHHHHHHHHhcccCCCCCCCceEEEEeC
Q 002285 781 GAAIDRILGEIVRHKGLKTPIDYVLCIGH 809 (942)
Q Consensus 781 G~Av~~Ll~~l~~~~~~~~~~d~vl~iGD 809 (942)
.-+|..+.+.+.-.+ .+.+..++-+||
T Consensus 351 s~GV~~lQ~y~~~~~--~i~~~~tLHVGD 377 (408)
T PF06437_consen 351 SLGVRALQKYFDPEG--GIKPSETLHVGD 377 (408)
T ss_pred HHhHHHHHHHHHhcc--CCCccceeeehh
Confidence 999999998882111 167889999999
No 210
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
Probab=90.32 E-value=24 Score=40.61 Aligned_cols=134 Identities=19% Similarity=0.253 Sum_probs=83.8
Q ss_pred CceEEEeeccccc-CCHHHHHHHHHHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHH-HhhccccCCcCccc
Q 002285 374 RKVMLGVDRLDMI-KGIPQKILAFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIV-GRINGRYGTLTTVP 451 (942)
Q Consensus 374 ~~iIl~VgRLd~~-KGi~~lL~Af~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv-~~IN~~~~~~~~~p 451 (942)
+.+++..-|-.-. +++...+.|+.++.+++|+.. +++ |.--. +.. ++.+ ..+ +.. ..
T Consensus 205 ~~iLvT~HRreN~~~~~~~i~~al~~i~~~~~~~~--viy-----p~H~~-~~v-------~e~~~~~L----~~~--~~ 263 (383)
T COG0381 205 KYILVTAHRRENVGEPLEEICEALREIAEEYPDVI--VIY-----PVHPR-PRV-------RELVLKRL----KNV--ER 263 (383)
T ss_pred cEEEEEcchhhcccccHHHHHHHHHHHHHhCCCce--EEE-----eCCCC-hhh-------hHHHHHHh----CCC--Cc
Confidence 3555666677655 999999999999999998853 222 22111 222 2222 111 111 12
Q ss_pred EEEeCCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhccCCCc-e-EEEeCCCCcccccCC-ceEEECCCCHHHH
Q 002285 452 IHHLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKG-V-LILSEFAGAAQSLGA-GAILVNPWNITEV 528 (942)
Q Consensus 452 V~~l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G-~-lIlSe~~G~~~~lg~-~gllVnP~D~~~l 528 (942)
|+ +..+++..+...|+..|-+.+--| |=.--||-.- | | +++=+.+-=.+.+.. +-++|+ .|.+.+
T Consensus 264 v~-li~pl~~~~f~~L~~~a~~iltDS-----GgiqEEAp~l-----g~Pvl~lR~~TERPE~v~agt~~lvg-~~~~~i 331 (383)
T COG0381 264 VK-LIDPLGYLDFHNLMKNAFLILTDS-----GGIQEEAPSL-----GKPVLVLRDTTERPEGVEAGTNILVG-TDEENI 331 (383)
T ss_pred EE-EeCCcchHHHHHHHHhceEEEecC-----CchhhhHHhc-----CCcEEeeccCCCCccceecCceEEeC-ccHHHH
Confidence 43 556788999999999996666544 3345688776 4 3 444455544444522 334555 578999
Q ss_pred HHHHHHHhCCCH
Q 002285 529 ASSIGYALNMPA 540 (942)
Q Consensus 529 A~aI~~aL~m~~ 540 (942)
.+++..+++++.
T Consensus 332 ~~~~~~ll~~~~ 343 (383)
T COG0381 332 LDAATELLEDEE 343 (383)
T ss_pred HHHHHHHhhChH
Confidence 999999998754
No 211
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=90.26 E-value=0.18 Score=51.06 Aligned_cols=41 Identities=17% Similarity=0.327 Sum_probs=35.2
Q ss_pred EECCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhc
Q 002285 774 RAVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFF 821 (942)
Q Consensus 774 ~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~ 821 (942)
.+.+.+|+.+++++++..+ ++.+.++++|| +.+|.+|++.+
T Consensus 137 ~~~~~~K~~~l~~~~~~~~------~~~~~~~~iGD-s~~D~~~~~~a 177 (177)
T TIGR01488 137 NPEGECKGKVLKELLEESK------ITLKKIIAVGD-SVNDLPMLKLA 177 (177)
T ss_pred cCCcchHHHHHHHHHHHhC------CCHHHEEEEeC-CHHHHHHHhcC
Confidence 4567899999999998876 45788999999 99999999864
No 212
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=89.97 E-value=1.2 Score=53.93 Aligned_cols=62 Identities=19% Similarity=0.262 Sum_probs=47.0
Q ss_pred cCCEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCC-eEEEEcCCChhhHHHhhcccCc
Q 002285 600 SNNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMT-TVVVLSGSDRNVLDDNFGEYNM 673 (942)
Q Consensus 600 s~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~-~V~IvSGR~~~~L~~~~~~~~l 673 (942)
...+.+++-.||++..... ....+-|++.++|++|.+ .|. +++|+||.+....+...+.+++
T Consensus 340 ~~~~~~~v~~~~~~~g~i~-----------~~d~l~~~~~e~i~~L~~-~Gi~~v~vvTgd~~~~a~~i~~~lgi 402 (536)
T TIGR01512 340 AGKTIVHVARDGTYLGYIL-----------LSDEPRPDAAEAIAELKA-LGIEKVVMLTGDRRAVAERVARELGI 402 (536)
T ss_pred CCCeEEEEEECCEEEEEEE-----------EeccchHHHHHHHHHHHH-cCCCcEEEEcCCCHHHHHHHHHHcCC
Confidence 3446677777888765421 233577899999999987 688 9999999999988888777554
No 213
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=89.52 E-value=0.04 Score=59.16 Aligned_cols=85 Identities=8% Similarity=0.076 Sum_probs=52.3
Q ss_pred cCCEEEEEecCCccCCCCCccCC--C------CCc----cccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHh
Q 002285 600 SNNRLLILGFNATLTAPVDFLGR--R------GGQ----IREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDN 667 (942)
Q Consensus 600 s~~rLi~lD~DGTL~~~~~~P~~--~------~~~----~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~ 667 (942)
-++..++||+|+|+++..+.-.. . ... +.......-|.+++.++.+.+ .|..|+++|||+-..-+.-
T Consensus 70 ~~~~avv~DIDeTvLsn~~y~~~~~~~~~~~~~~~w~~wv~~~~~~aip~a~~l~~~~~~-~G~~V~~iT~R~~~~r~~T 148 (229)
T PF03767_consen 70 DKPPAVVFDIDETVLSNSPYYAYLIFGGESFSPEDWDEWVASGKAPAIPGALELYNYARS-RGVKVFFITGRPESQREAT 148 (229)
T ss_dssp TSEEEEEEESBTTTEEHHHHHHHHHHHTHHH-CCHHHHHHHCTGGEEETTHHHHHHHHHH-TTEEEEEEEEEETTCHHHH
T ss_pred CCCcEEEEECCcccccCHHHHHHHhhccCCCChHHHHHHHhcccCcccHHHHHHHHHHHH-CCCeEEEEecCCchhHHHH
Confidence 45678999999999854221000 0 000 001223455668899999887 6999999999998865544
Q ss_pred hccc-CceEEeecceEEEe
Q 002285 668 FGEY-NMWLAAENGMFLRL 685 (942)
Q Consensus 668 ~~~~-~l~liaehG~~ir~ 685 (942)
...+ ..|+.+-.+.+++.
T Consensus 149 ~~nL~~~G~~~~~~l~lr~ 167 (229)
T PF03767_consen 149 EKNLKKAGFPGWDHLILRP 167 (229)
T ss_dssp HHHHHHHTTSTBSCGEEEE
T ss_pred HHHHHHcCCCccchhcccc
Confidence 4444 23443445556653
No 214
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=89.25 E-value=0.23 Score=49.46 Aligned_cols=39 Identities=18% Similarity=0.113 Sum_probs=36.1
Q ss_pred CHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCcC
Q 002285 779 TKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEPE 824 (942)
Q Consensus 779 nKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~~ 824 (942)
+|-.|.+.|+++++ +.++.+.|+|| |.+|.++|+.++-.
T Consensus 83 dK~~a~~~L~~~~~------l~~e~~ayiGD-D~~Dlpvm~~vGls 121 (170)
T COG1778 83 DKLAAFEELLKKLN------LDPEEVAYVGD-DLVDLPVMEKVGLS 121 (170)
T ss_pred hHHHHHHHHHHHhC------CCHHHhhhhcC-ccccHHHHHHcCCc
Confidence 89999999999998 66899999999 99999999999863
No 215
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=89.24 E-value=0.56 Score=47.27 Aligned_cols=57 Identities=14% Similarity=0.182 Sum_probs=39.8
Q ss_pred EEEEecCCccCCCCCccCCCCCcccc-CCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHH
Q 002285 604 LLILGFNATLTAPVDFLGRRGGQIRE-MEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLD 665 (942)
Q Consensus 604 Li~lD~DGTL~~~~~~P~~~~~~~~~-~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~ 665 (942)
++++|+||||+... ..++-++- ......+.+.++.+++++ .|..++-+|+|+.....
T Consensus 1 VVvsDIDGTiT~SD----~~G~i~~~~G~d~~h~g~~~l~~~i~~-~GY~ilYlTaRp~~qa~ 58 (157)
T PF08235_consen 1 VVVSDIDGTITKSD----VLGHILPILGKDWTHPGAAELYRKIAD-NGYKILYLTARPIGQAN 58 (157)
T ss_pred CEEEeccCCcCccc----hhhhhhhccCchhhhhcHHHHHHHHHH-CCeEEEEECcCcHHHHH
Confidence 47899999999761 01111110 011577889999999987 69999999999976543
No 216
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=89.07 E-value=49 Score=38.12 Aligned_cols=87 Identities=17% Similarity=0.137 Sum_probs=56.9
Q ss_pred HHHHHHHHHHccEEEECCCCCCCChhHHHHHhhccCCCceEEEeCCCCcc--cc------c--CCceEEECCCC--HHHH
Q 002285 461 FHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAA--QS------L--GAGAILVNPWN--ITEV 528 (942)
Q Consensus 461 ~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~--~~------l--g~~gllVnP~D--~~~l 528 (942)
.+++.++|++||+++.=+= ++++-|..+++ -|.|+=-+...+ ++ + -..|+.+.-.+ .+.+
T Consensus 243 ~~dm~~~~~~ADLvIsRaG----a~Ti~E~~a~g----~P~IliP~p~~~~~~Q~~NA~~l~~~gaa~~i~~~~lt~~~l 314 (357)
T COG0707 243 IDDMAALLAAADLVISRAG----ALTIAELLALG----VPAILVPYPPGADGHQEYNAKFLEKAGAALVIRQSELTPEKL 314 (357)
T ss_pred HhhHHHHHHhccEEEeCCc----ccHHHHHHHhC----CCEEEeCCCCCccchHHHHHHHHHhCCCEEEeccccCCHHHH
Confidence 4679999999999986542 58899999992 466665554441 22 2 23566666555 8899
Q ss_pred HHHHHHHhCCCHHHHHHHHHHHhHHHHh
Q 002285 529 ASSIGYALNMPADEREKRHLHNFMHVTT 556 (942)
Q Consensus 529 A~aI~~aL~m~~~er~~r~~~~~~~v~~ 556 (942)
++.|..+++. ++...++..+++.....
T Consensus 315 ~~~i~~l~~~-~~~l~~m~~~a~~~~~p 341 (357)
T COG0707 315 AELILRLLSN-PEKLKAMAENAKKLGKP 341 (357)
T ss_pred HHHHHHHhcC-HHHHHHHHHHHHhcCCC
Confidence 9999999986 33333443444443333
No 217
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=88.21 E-value=1 Score=49.41 Aligned_cols=17 Identities=6% Similarity=0.110 Sum_probs=14.8
Q ss_pred cCCEEEEEecCCccCCC
Q 002285 600 SNNRLLILGFNATLTAP 616 (942)
Q Consensus 600 s~~rLi~lD~DGTL~~~ 616 (942)
-..++|+||+||||++.
T Consensus 22 ~~~k~vIFDlDGTLvDS 38 (260)
T PLN03243 22 CGWLGVVLEWEGVIVED 38 (260)
T ss_pred CCceEEEEeCCCceeCC
Confidence 35689999999999986
No 218
>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=88.21 E-value=56 Score=40.10 Aligned_cols=49 Identities=20% Similarity=0.321 Sum_probs=32.2
Q ss_pred CCCCEEEEcCCchh--hHHHHHHhhCCCCeEEEEeccCCCChhHhhcCCchHHHHH
Q 002285 241 EEGDVVWCHDYHLM--FLPQCLKEYNNNMKVGWFLHTPFPSSEIHRTLPSRTELLR 294 (942)
Q Consensus 241 ~~~DiIwvHDyhL~--llp~~Lr~~~p~~~I~~flH~PfP~~e~fr~lp~r~~il~ 294 (942)
+++|+|..=||-=+ .+.+.+|+.+.+.|+.++. ++.+|.-=++|...++
T Consensus 309 ~kPD~vIlID~PgFNlrLAK~lkk~Gi~ipviyYV-----sPqVWAWR~~Rikki~ 359 (608)
T PRK01021 309 TNPRTVICIDFPDFHFLLIKKLRKRGYKGKIVHYV-----CPSIWAWRPKRKTILE 359 (608)
T ss_pred cCCCEEEEeCCCCCCHHHHHHHHhcCCCCCEEEEE-----CccceeeCcchHHHHH
Confidence 47898888776532 4678899987767887775 3456654455544443
No 219
>TIGR01426 MGT glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.
Probab=88.19 E-value=6.9 Score=45.10 Aligned_cols=99 Identities=10% Similarity=0.053 Sum_probs=59.1
Q ss_pred eCCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhccCCCceEEEeCCCCccc----cc--CCceEEECC--CCHH
Q 002285 455 LDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQ----SL--GAGAILVNP--WNIT 526 (942)
Q Consensus 455 l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~----~l--g~~gllVnP--~D~~ 526 (942)
+.+.+++. .++..||++|..+ |.| +.+|++++ +.|+|+.-..+--. .+ ...|..++. .+.+
T Consensus 279 ~~~~~p~~---~ll~~~~~~I~hg---G~~-t~~Eal~~----G~P~v~~p~~~dq~~~a~~l~~~g~g~~l~~~~~~~~ 347 (392)
T TIGR01426 279 VRQWVPQL---EILKKADAFITHG---GMN-STMEALFN----GVPMVAVPQGADQPMTARRIAELGLGRHLPPEEVTAE 347 (392)
T ss_pred EeCCCCHH---HHHhhCCEEEECC---Cch-HHHHHHHh----CCCEEecCCcccHHHHHHHHHHCCCEEEeccccCCHH
Confidence 34667764 5688999998654 655 67999999 24555544332111 12 124566654 4678
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHhHHHHh-cCHHHHHHHH
Q 002285 527 EVASSIGYALNMPADEREKRHLHNFMHVTT-HTSQEWAATF 566 (942)
Q Consensus 527 ~lA~aI~~aL~m~~~er~~r~~~~~~~v~~-~~~~~W~~~f 566 (942)
+++++|.++|..+ +.+++.++..+.+.. ......++.+
T Consensus 348 ~l~~ai~~~l~~~--~~~~~~~~l~~~~~~~~~~~~aa~~i 386 (392)
T TIGR01426 348 KLREAVLAVLSDP--RYAERLRKMRAEIREAGGARRAADEI 386 (392)
T ss_pred HHHHHHHHHhcCH--HHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 9999999999864 334444444444433 3445554433
No 220
>PRK14089 ipid-A-disaccharide synthase; Provisional
Probab=87.87 E-value=52 Score=37.71 Aligned_cols=44 Identities=14% Similarity=0.169 Sum_probs=31.5
Q ss_pred CCCCEEEEcCCchh--hHHHHHHhhCCCCeEEEEeccCCCChhHhhcCCch
Q 002285 241 EEGDVVWCHDYHLM--FLPQCLKEYNNNMKVGWFLHTPFPSSEIHRTLPSR 289 (942)
Q Consensus 241 ~~~DiIwvHDyhL~--llp~~Lr~~~p~~~I~~flH~PfP~~e~fr~lp~r 289 (942)
+++|++..=||-=+ .+.+.+|+.+|++++.++. ++.+|.-=++|
T Consensus 75 ~~pd~~i~iD~p~Fnl~lak~~k~~~~~i~viyyi-----~PqvWAWr~~R 120 (347)
T PRK14089 75 KQADKVLLMDSSSFNIPLAKKIKKAYPKKEIIYYI-----LPQVWAWKKGR 120 (347)
T ss_pred cCCCEEEEeCCCCCCHHHHHHHHhcCCCCCEEEEE-----CccceeeCcch
Confidence 67898888777532 4788999999999988775 34566544444
No 221
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=87.29 E-value=1 Score=48.08 Aligned_cols=15 Identities=20% Similarity=0.264 Sum_probs=13.3
Q ss_pred CEEEEEecCCccCCC
Q 002285 602 NRLLILGFNATLTAP 616 (942)
Q Consensus 602 ~rLi~lD~DGTL~~~ 616 (942)
.++|+||+||||++.
T Consensus 10 ~k~vIFDlDGTL~d~ 24 (224)
T PRK14988 10 VDTVLLDMDGTLLDL 24 (224)
T ss_pred CCEEEEcCCCCccch
Confidence 578999999999994
No 222
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=87.08 E-value=3.5 Score=45.55 Aligned_cols=89 Identities=15% Similarity=0.147 Sum_probs=56.9
Q ss_pred CceEEEeecccccCCHHHHHHHHHHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEE
Q 002285 374 RKVMLGVDRLDMIKGIPQKILAFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIH 453 (942)
Q Consensus 374 ~~iIl~VgRLd~~KGi~~lL~Af~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~ 453 (942)
+++++..|-.|+.+....+++|+..+. +++. +.+ |.++.. +.+ +++++++.. +. .|.
T Consensus 171 ~~iLi~~GG~d~~~~~~~~l~~l~~~~---~~~~--i~v--v~G~~~---~~~----~~l~~~~~~-~~--------~i~ 227 (279)
T TIGR03590 171 RRVLVSFGGADPDNLTLKLLSALAESQ---INIS--ITL--VTGSSN---PNL----DELKKFAKE-YP--------NII 227 (279)
T ss_pred CeEEEEeCCcCCcCHHHHHHHHHhccc---cCce--EEE--EECCCC---cCH----HHHHHHHHh-CC--------CEE
Confidence 568999999999887778888887642 3332 333 333321 222 334444332 11 133
Q ss_pred EeCCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhh
Q 002285 454 HLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVAC 493 (942)
Q Consensus 454 ~l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~ 493 (942)
. .+ ..+++..+|..||+++.. -|.++.|++++
T Consensus 228 ~-~~--~~~~m~~lm~~aDl~Is~-----~G~T~~E~~a~ 259 (279)
T TIGR03590 228 L-FI--DVENMAELMNEADLAIGA-----AGSTSWERCCL 259 (279)
T ss_pred E-Ee--CHHHHHHHHHHCCEEEEC-----CchHHHHHHHc
Confidence 2 22 257899999999999984 45899999999
No 223
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=86.74 E-value=1.4 Score=49.67 Aligned_cols=63 Identities=24% Similarity=0.284 Sum_probs=47.4
Q ss_pred CEEEEEecCCccCCCC--CccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcc
Q 002285 602 NRLLILGFNATLTAPV--DFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGE 670 (942)
Q Consensus 602 ~rLi~lD~DGTL~~~~--~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~ 670 (942)
.|+|++|+|.||..-+ ++ +..+ + .-..+.+.+.+.|++|.+ .|..++|+|..+...+...|..
T Consensus 3 ~k~~v~DlDnTlw~gv~~e~-g~~~--i--~~~~~~~~~~e~L~~L~~-~Gi~lai~S~n~~~~a~~~l~~ 67 (320)
T TIGR01686 3 LKVLVLDLDNTLWGGVLGED-GIDN--L--NLSPLHKTLQEKIKTLKK-QGFLLALASKNDEDDAKKVFER 67 (320)
T ss_pred eEEEEEcCCCCCCCCEEccC-Cccc--c--ccCccHHHHHHHHHHHHh-CCCEEEEEcCCCHHHHHHHHHh
Confidence 5899999999999753 11 0000 0 011245889999999987 6999999999999999988877
No 224
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=86.46 E-value=1.3 Score=45.09 Aligned_cols=39 Identities=18% Similarity=0.206 Sum_probs=30.8
Q ss_pred ECCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCc
Q 002285 775 AVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 775 p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
+.|..|+..++++++.. ++.++++|| +.+|..|-+.+.-
T Consensus 145 ~~g~~K~~~~~~~~~~~---------~~~~i~iGD-~~~D~~aa~~~d~ 183 (188)
T TIGR01489 145 PCGCCKGKVIHKLSEPK---------YQHIIYIGD-GVTDVCPAKLSDV 183 (188)
T ss_pred CCCCCHHHHHHHHHhhc---------CceEEEECC-CcchhchHhcCCc
Confidence 45778998888887642 467899999 9999998877654
No 225
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=86.37 E-value=1.3 Score=46.87 Aligned_cols=39 Identities=10% Similarity=0.078 Sum_probs=32.2
Q ss_pred CCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhccc
Q 002285 632 PKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEY 671 (942)
Q Consensus 632 ~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~ 671 (942)
..+.|.+.+.|+.|.+ .|..++|+||.....++.++..+
T Consensus 69 ~~l~pg~~e~l~~l~~-~g~~~~IvS~~~~~~i~~il~~~ 107 (214)
T TIGR03333 69 AEIREGFREFVAFINE-HGIPFYVISGGMDFFVYPLLEGI 107 (214)
T ss_pred CcccccHHHHHHHHHH-CCCeEEEECCCcHHHHHHHHHhh
Confidence 4577888899999886 58999999999888888877654
No 226
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=86.27 E-value=0.68 Score=47.77 Aligned_cols=51 Identities=16% Similarity=0.186 Sum_probs=38.4
Q ss_pred CEEEEEecCCccCCCCCccCCCCCcccc-CCCCCChhHHHHHHHhhhCCCCeEEEEcCC
Q 002285 602 NRLLILGFNATLTAPVDFLGRRGGQIRE-MEPKLHPDLKEPLKRLCDDPMTTVVVLSGS 659 (942)
Q Consensus 602 ~rLi~lD~DGTL~~~~~~P~~~~~~~~~-~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR 659 (942)
.++||||-||||.-..++ ++.. ++-...+.++++|.+|.+ .|..++|+|--
T Consensus 5 ~k~lflDRDGtin~d~~~------yv~~~~~~~~~~g~i~al~~l~~-~gy~lVvvTNQ 56 (181)
T COG0241 5 QKALFLDRDGTINIDKGD------YVDSLDDFQFIPGVIPALLKLQR-AGYKLVVVTNQ 56 (181)
T ss_pred CcEEEEcCCCceecCCCc------ccCcHHHhccCccHHHHHHHHHh-CCCeEEEEECC
Confidence 679999999999865321 1111 344678899999999996 79999999863
No 227
>PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 35 GT35 from CAZY comprises enzymes with only one known activity; glycogen and starch phosphorylase (2.4.1.1 from EC). The main role of glycogen phosphorylase (GPase) is to provide phosphorylated glucose molecules (G-1-P) []. GPase is a highly regulated allosteric enzyme. The net effect of the regulatory site allows the enzyme to operate at a variety of rates; the enzyme is not simply regulated as "on" or "off", but rather it can be thought of being set to operate at an ideal rate based on changing conditions at in the cell. The most important allosteric effector is the phosphate molecule covalently attached to Ser14. This switches GPase from the b (inactive) state to the a (active) state. Upon phosphorylation, GPase attains about 80% of its Vmax. When the enzyme is not phosphorylated, GPase activity is practically non-existent at low AMP levels. There is some apparent controversy as to the structure of GPase. All sources agree that the enzyme is multimeric, but there is apparent controversy as to the enzyme being a tetramer or a dimer. Apparently, GPase (in the a form) forms tetramers in the crystal form. The consensus seems to be that `regardless of the a or b form, GPase functions as a dimer in vivo []. The GPase monomer is best described as consisting of two domains, an N-terminal domain and a C-terminal domain []. The C-terminal domain is often referred to as the catalytic domain. It consists of a beta-sheet core surrounded by layers of helical segments []. The vitamin cofactor pyridoxal phosphate (PLP) is covalently attached to the amino acid backbone. The N-terminal domain also consists of a central beta-sheet core and is surrounded by layers of helical segments. The N-terminal domain contains different allosteric effector sites to regulate the enzyme. Bacterial phosphorylases follow the same catalytic mechanisms as their plant and animal counterparts, but differ considerably in terms of their substrate specificity and regulation. The catalytic domains are highly conserved while the regulatory sites are only poorly conserved. For maltodextrin phosphorylase from Escherichia coli the physiological role of the enzyme in the utilisation of maltidextrins is known in detail; that of all the other bacterial phosphorylases is still unclear. Roles in regulatuon of endogenous glycogen metabolism in periods of starvation, and sporulation, stress response or quick adaptation to changing environments are possible [].; GO: 0004645 phosphorylase activity, 0005975 carbohydrate metabolic process; PDB: 1YGP_B 2AW3_B 2AV6_B 1AHP_B 1QM5_A 1L5W_A 2ECP_A 2ASV_A 1L5V_B 1E4O_B ....
Probab=86.13 E-value=26 Score=43.56 Aligned_cols=149 Identities=17% Similarity=0.163 Sum_probs=89.3
Q ss_pred CCceEEEeecccccCCHHHH----HHHHHHhHHhCCCCCC-cEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCc
Q 002285 373 GRKVMLGVDRLDMIKGIPQK----ILAFEKFLEENPSWRD-KVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTL 447 (942)
Q Consensus 373 ~~~iIl~VgRLd~~KGi~~l----L~Af~~ll~~~P~~~~-~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~ 447 (942)
+..+++++-|+..-|-.... +.-+.++++ .|+... -+++|.-|....++... +++-+.|.+++..||..-...
T Consensus 443 ~slfdv~~rR~heYKRq~LniL~ii~~y~rik~-~p~~~~~Pv~~IFaGKAhP~d~~g-K~iIk~I~~va~~in~Dp~v~ 520 (713)
T PF00343_consen 443 DSLFDVQARRFHEYKRQLLNILHIIDRYNRIKN-NPNKKIRPVQFIFAGKAHPGDYMG-KEIIKLINNVAEVINNDPEVG 520 (713)
T ss_dssp TSEEEEEES-SCCCCTHHHHHHHHHHHHHHHHH-STTSCCS-EEEEEE----TT-HHH-HHHHHHHHHHHHHHCT-TTTC
T ss_pred chhhhhhhhhcccccccCcccccHHHHHHHHHh-cccCCCCCeEEEEeccCCCCcHHH-HHHHHHHHHHHHHHhcChhhc
Confidence 45567899999999987773 334555544 554221 25555544444444332 456667777777777643333
Q ss_pred CcccEEEeCCCCCHHHHHHHHHHccEEEECCCC--CCCChhHHHHHhhccCCCceEEEeCCCCccccc----C-CceEEE
Q 002285 448 TTVPIHHLDRSLDFHALCALYAITDVALVTSLR--DGMNLVSYEFVACQASKKGVLILSEFAGAAQSL----G-AGAILV 520 (942)
Q Consensus 448 ~~~pV~~l~~~v~~~el~aly~~ADv~v~pSl~--EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l----g-~~gllV 520 (942)
+...|+|+. ..+-.--..++.++||-+.+|++ |.-|..-+=||.- |.+.+|..-|+.-++ | .+.+++
T Consensus 521 ~~lkVvFle-nYdvslA~~lipg~DVwln~p~~p~EASGTSgMK~~~N-----GaL~lstlDG~niEi~e~vG~eN~fiF 594 (713)
T PF00343_consen 521 DRLKVVFLE-NYDVSLAEKLIPGVDVWLNIPTRPKEASGTSGMKAAMN-----GALNLSTLDGWNIEIAEAVGEENIFIF 594 (713)
T ss_dssp CGEEEEEET-T-SHHHHHHHGGG-SEEEE---TTSSSS-SHHHHHHHT-----T-EEEEESSTCHHHHHHHH-GGGSEEE
T ss_pred cceeEEeec-CCcHHHHHHHhhhhhhhhhCCCCCccccCCCcchhhcC-----CCeEEecccchhHHHHHhcCCCcEEEc
Confidence 334588765 45666777889999999999985 9999999999885 999999999986665 5 466777
Q ss_pred CCCCHHHHHH
Q 002285 521 NPWNITEVAS 530 (942)
Q Consensus 521 nP~D~~~lA~ 530 (942)
- .+.+++.+
T Consensus 595 G-~~~~ev~~ 603 (713)
T PF00343_consen 595 G-LTAEEVEE 603 (713)
T ss_dssp S--BHHHHHH
T ss_pred C-CCHHHHHH
Confidence 3 34555443
No 228
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=84.82 E-value=0.72 Score=49.18 Aligned_cols=40 Identities=23% Similarity=0.200 Sum_probs=32.2
Q ss_pred CCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccC
Q 002285 632 PKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYN 672 (942)
Q Consensus 632 ~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~ 672 (942)
..+-|.+.++|..|.+ .+..++++|+.+...++..+..++
T Consensus 85 ~~~~pGv~~~l~~L~~-~~i~~avaS~s~~~~~~~~L~~~g 124 (221)
T COG0637 85 LKPIPGVVELLEQLKA-RGIPLAVASSSPRRAAERVLARLG 124 (221)
T ss_pred CCCCccHHHHHHHHHh-cCCcEEEecCChHHHHHHHHHHcc
Confidence 4567788999999987 478999999999888887776653
No 229
>KOG3742 consensus Glycogen synthase [Carbohydrate transport and metabolism]
Probab=84.71 E-value=16 Score=42.33 Aligned_cols=72 Identities=11% Similarity=0.047 Sum_probs=51.1
Q ss_pred HHHHHHHHccEEEECCCCCCCChhHHHHHhhccCCCceEEEeCCCCccccc-------CCceEEE-C-----C-CCHHHH
Q 002285 463 ALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSL-------GAGAILV-N-----P-WNITEV 528 (942)
Q Consensus 463 el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l-------g~~gllV-n-----P-~D~~~l 528 (942)
++-.+.+.|.+.|+||.+|.+|.++.|...+ +-|-|.+..+|....+ ...|+.| + | .+++++
T Consensus 493 DYeeFVRGCHLGVFPSYYEPWGYTPAECTVM----GiPSvtTNlSGFGcfMeehi~d~~ayGIYIvDRRfks~deSv~qL 568 (692)
T KOG3742|consen 493 DYEEFVRGCHLGVFPSYYEPWGYTPAECTVM----GIPSVTTNLSGFGCFMEEHIEDPQAYGIYIVDRRFKSPDESVQQL 568 (692)
T ss_pred CHHHHhccccccccccccCCCCCCchheEEe----ccccccccccchhhhHHHHhcCchhceEEEEecccCChhhHHHHH
Confidence 4567789999999999999999999998887 2356666666654433 1345543 2 2 356788
Q ss_pred HHHHHHHhCC
Q 002285 529 ASSIGYALNM 538 (942)
Q Consensus 529 A~aI~~aL~m 538 (942)
++-|......
T Consensus 569 ~~~m~~F~~q 578 (692)
T KOG3742|consen 569 ASFMYEFCKQ 578 (692)
T ss_pred HHHHHHHHHH
Confidence 8888777653
No 230
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=84.30 E-value=1.6 Score=44.76 Aligned_cols=72 Identities=21% Similarity=0.235 Sum_probs=39.8
Q ss_pred CEEEEEecCCccCCCCCccC-----CC--CC-c---cccCCCCCChhHHHHHHHhhhCCCCeEEEEcCC-ChhhHHHhhc
Q 002285 602 NRLLILGFNATLTAPVDFLG-----RR--GG-Q---IREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGS-DRNVLDDNFG 669 (942)
Q Consensus 602 ~rLi~lD~DGTL~~~~~~P~-----~~--~~-~---~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR-~~~~L~~~~~ 669 (942)
.+||+||+|+||-+..-+-- .. .. . .......+-|.+.++|+.|.. .|+.++++|=- ..+...+.++
T Consensus 3 PklvvFDLD~TlW~~~~~~~~~~Pf~~~~~~~~v~D~~g~~v~lypdv~~iL~~L~~-~gv~lavASRt~~P~~A~~~L~ 81 (169)
T PF12689_consen 3 PKLVVFDLDYTLWPPWMDTHVGPPFKKISNGNVVVDSRGEEVSLYPDVPEILQELKE-RGVKLAVASRTDEPDWARELLK 81 (169)
T ss_dssp -SEEEE-STTTSSSS-TTTSS-S-EEE-TTS--EEETT--EE---TTHHHHHHHHHH-CT--EEEEE--S-HHHHHHHHH
T ss_pred CcEEEEcCcCCCCchhHhhccCCCceecCCCCEEEeCCCCEEEeCcCHHHHHHHHHH-CCCEEEEEECCCChHHHHHHHH
Confidence 47999999999998632110 00 00 0 112345678899999999998 69999999953 3456666777
Q ss_pred ccCce
Q 002285 670 EYNMW 674 (942)
Q Consensus 670 ~~~l~ 674 (942)
.+++.
T Consensus 82 ~l~i~ 86 (169)
T PF12689_consen 82 LLEID 86 (169)
T ss_dssp HTT-C
T ss_pred hcCCC
Confidence 66554
No 231
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=84.25 E-value=1 Score=45.09 Aligned_cols=67 Identities=19% Similarity=0.189 Sum_probs=42.8
Q ss_pred EEEEEecCCccCCCCCccCCCCCc-----cccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhccc
Q 002285 603 RLLILGFNATLTAPVDFLGRRGGQ-----IREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEY 671 (942)
Q Consensus 603 rLi~lD~DGTL~~~~~~P~~~~~~-----~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~ 671 (942)
++++||+||||+.....+....+. .......+-|.+.+.|+.|+. ...|+|.|..+....+..+..+
T Consensus 1 k~LVlDLD~TLv~~~~~~~~~~~~~~~~~~~~~~v~~RP~l~~FL~~l~~--~~ev~i~T~~~~~ya~~v~~~l 72 (159)
T PF03031_consen 1 KTLVLDLDGTLVHSSSKSPLPYDFKIIDQRGGYYVKLRPGLDEFLEELSK--HYEVVIWTSASEEYAEPVLDAL 72 (159)
T ss_dssp EEEEEE-CTTTEEEESSTCTT-SEEEETEEEEEEEEE-TTHHHHHHHHHH--HCEEEEE-SS-HHHHHHHHHHH
T ss_pred CEEEEeCCCcEEEEeecCCCCcccceeccccceeEeeCchHHHHHHHHHH--hceEEEEEeehhhhhhHHHHhh
Confidence 689999999999765432100000 001123356889999999875 6999999999998888777665
No 232
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=84.10 E-value=1.3 Score=46.58 Aligned_cols=39 Identities=18% Similarity=0.088 Sum_probs=30.2
Q ss_pred CCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccCc
Q 002285 633 KLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYNM 673 (942)
Q Consensus 633 ~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l 673 (942)
.+.|.+.+.|..|.+. ..++|+||-....++.++..+++
T Consensus 68 ~l~pga~ell~~lk~~--~~~~IVS~~~~~~~~~il~~lgi 106 (203)
T TIGR02137 68 KPLEGAVEFVDWLRER--FQVVILSDTFYEFSQPLMRQLGF 106 (203)
T ss_pred CCCccHHHHHHHHHhC--CeEEEEeCChHHHHHHHHHHcCC
Confidence 5778888888888863 48888888888888877776554
No 233
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=83.83 E-value=1.2 Score=48.85 Aligned_cols=53 Identities=21% Similarity=0.310 Sum_probs=39.6
Q ss_pred CEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCC---ChhhHHHhhcc
Q 002285 602 NRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGS---DRNVLDDNFGE 670 (942)
Q Consensus 602 ~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR---~~~~L~~~~~~ 670 (942)
...++||+||||..- ..+-|...++|++|.+ .|.+++++|-. +...+.+.+..
T Consensus 8 y~~~l~DlDGvl~~G---------------~~~ipga~e~l~~L~~-~g~~~iflTNn~~~s~~~~~~~L~~ 63 (269)
T COG0647 8 YDGFLFDLDGVLYRG---------------NEAIPGAAEALKRLKA-AGKPVIFLTNNSTRSREVVAARLSS 63 (269)
T ss_pred cCEEEEcCcCceEeC---------------CccCchHHHHHHHHHH-cCCeEEEEeCCCCCCHHHHHHHHHh
Confidence 456999999999964 3456889999999998 58999998754 44545444444
No 234
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=83.13 E-value=1.8 Score=43.67 Aligned_cols=71 Identities=18% Similarity=0.068 Sum_probs=51.4
Q ss_pred ccCCEEEEEecCCccCCCCCccCCCCCcc-----c----------------cCCCCCChhHHHHHHHhhhCCCCeEEEEc
Q 002285 599 QSNNRLLILGFNATLTAPVDFLGRRGGQI-----R----------------EMEPKLHPDLKEPLKRLCDDPMTTVVVLS 657 (942)
Q Consensus 599 ~s~~rLi~lD~DGTL~~~~~~P~~~~~~~-----~----------------~~~~~~~~~~~~aL~~L~~d~g~~V~IvS 657 (942)
+.++..++||+|.||+.....|....... + .....+-|.+.+.|++|++ +..++|+|
T Consensus 3 ~~~kl~LVLDLDeTLihs~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~rPgv~efL~~l~~--~yel~I~T 80 (156)
T TIGR02250 3 REKKLHLVLDLDQTLIHTTKDPTLSEWEKYDIEEPNSETRRDLRKFNLGTMWYLTKLRPFLHEFLKEASK--LYEMHVYT 80 (156)
T ss_pred cCCceEEEEeCCCCcccccccCccchhhhcccccCCccccccceEEEcCCeEEEEEECCCHHHHHHHHHh--hcEEEEEe
Confidence 45678899999999998765552111000 0 0123356899999999985 69999999
Q ss_pred CCChhhHHHhhccc
Q 002285 658 GSDRNVLDDNFGEY 671 (942)
Q Consensus 658 GR~~~~L~~~~~~~ 671 (942)
.-+....+..+..+
T Consensus 81 ~~~~~yA~~vl~~l 94 (156)
T TIGR02250 81 MGTRAYAQAIAKLI 94 (156)
T ss_pred CCcHHHHHHHHHHh
Confidence 99999988887776
No 235
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=83.08 E-value=2.1 Score=48.45 Aligned_cols=49 Identities=14% Similarity=0.192 Sum_probs=36.1
Q ss_pred EEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCC----CCeEEEEc---CCChhhHHHhh
Q 002285 604 LLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDP----MTTVVVLS---GSDRNVLDDNF 668 (942)
Q Consensus 604 Li~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~----g~~V~IvS---GR~~~~L~~~~ 668 (942)
.|+||+||||... ..+-+...++|+.|.. . +..++++| |++...+.+.+
T Consensus 2 ~~ifD~DGvL~~g---------------~~~i~ga~eal~~L~~-~~~~~g~~~~flTNn~g~s~~~~~~~l 57 (321)
T TIGR01456 2 GFAFDIDGVLFRG---------------KKPIAGASDALRRLNR-NQGQLKIPYIFLTNGGGFSERARAEEI 57 (321)
T ss_pred EEEEeCcCceECC---------------ccccHHHHHHHHHHhc-cccccCCCEEEEecCCCCCHHHHHHHH
Confidence 5889999999975 2347889999999986 4 67777665 66676654443
No 236
>COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism]
Probab=82.59 E-value=24 Score=44.03 Aligned_cols=137 Identities=15% Similarity=0.206 Sum_probs=97.2
Q ss_pred CCceEEEeecccccCCHHHHHHHHHHhHHhCC-CCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCccc
Q 002285 373 GRKVMLGVDRLDMIKGIPQKILAFEKFLEENP-SWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVP 451 (942)
Q Consensus 373 ~~~iIl~VgRLd~~KGi~~lL~Af~~ll~~~P-~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~p 451 (942)
+..+++++-|+..-|-....+.-..++...-. ++..++.++.-|....++... +++-+.|...+..+|.+ ..
T Consensus 486 ~~lfd~~~kRiheYKRq~Lnl~~i~~ly~~i~~d~~prv~~iFaGKAhP~y~~a-K~iIk~I~~~a~~in~~------lk 558 (750)
T COG0058 486 NALFDGQARRIHEYKRQLLNLLDIERLYRILKEDWVPRVQIIFAGKAHPADYAA-KEIIKLINDVADVINNK------LK 558 (750)
T ss_pred CcceeeeehhhhhhhhhHHhHhhHHHHHHHHhcCCCCceEEEEeccCCCcchHH-HHHHHHHHHHHHhhccc------ce
Confidence 35678899999999988877776666655443 565667766555444444432 45667777778888764 24
Q ss_pred EEEeCCCCCHHHHHHHHHHccEEEECCCC--CCCChhHHHHHhhccCCCceEEEeCCCCccccc-----CCceEEECC
Q 002285 452 IHHLDRSLDFHALCALYAITDVALVTSLR--DGMNLVSYEFVACQASKKGVLILSEFAGAAQSL-----GAGAILVNP 522 (942)
Q Consensus 452 V~~l~~~v~~~el~aly~~ADv~v~pSl~--EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l-----g~~gllVnP 522 (942)
|+|+. ..+-.--..++.+|||-..+|++ |.-|..-+=|+.- |.+-+|..-|+-.++ |.+|+++-.
T Consensus 559 VvFl~-nYdvslA~~iipa~Dvweqis~a~~EASGTsnMK~alN-----GaltigtlDGanvEi~e~vg~~N~~~fG~ 630 (750)
T COG0058 559 VVFLP-NYDVSLAELLIPAADVWEQIPTAGKEASGTSNMKAALN-----GALTLGTLDGANVEIYEHVGGENGWIFGE 630 (750)
T ss_pred EEEeC-CCChhHHHhhcccccccccCCCCCccccCcCcchHHhc-----CCceeeccccHHHHHHHhcCCCceEEeCC
Confidence 77765 34455556789999999999985 7777777777664 899999999987665 578888854
No 237
>PRK08238 hypothetical protein; Validated
Probab=81.80 E-value=2.9 Score=49.92 Aligned_cols=47 Identities=13% Similarity=0.163 Sum_probs=37.5
Q ss_pred CCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccCc--eEEeecc
Q 002285 633 KLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYNM--WLAAENG 680 (942)
Q Consensus 633 ~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l--~liaehG 680 (942)
.+.|++.+.|+++.+ .|.+++|+|+.+...++..+..+++ .++|.++
T Consensus 72 p~~pga~e~L~~lk~-~G~~v~LaTas~~~~a~~i~~~lGlFd~Vigsd~ 120 (479)
T PRK08238 72 PYNEEVLDYLRAERA-AGRKLVLATASDERLAQAVAAHLGLFDGVFASDG 120 (479)
T ss_pred CCChhHHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCCCCEEEeCCC
Confidence 356899999999986 6999999999999999988877653 3445443
No 238
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=81.68 E-value=14 Score=47.83 Aligned_cols=68 Identities=13% Similarity=0.222 Sum_probs=48.5
Q ss_pred hhhhcccCCEEEEEecCC-----ccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhh
Q 002285 594 VDSYLQSNNRLLILGFNA-----TLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNF 668 (942)
Q Consensus 594 ~~~y~~s~~rLi~lD~DG-----TL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~ 668 (942)
.+.|.+...|.+++=+++ |++-... ..-.+-+++.++|++|.+ .|.+|+++||-.........
T Consensus 495 ~~~~a~~G~rvl~~A~~~~~~~l~~lGli~-----------l~Dp~r~~~~~~i~~l~~-~Gi~v~miTGD~~~tA~~ia 562 (884)
T TIGR01522 495 AAEMASAGLRVIAFASGPEKGQLTFLGLVG-----------INDPPRPGVKEAVTTLIT-GGVRIIMITGDSQETAVSIA 562 (884)
T ss_pred HHHHHhcCCEEEEEEEEcCCCCeEEEEEEe-----------ccCcchhHHHHHHHHHHH-CCCeEEEECCCCHHHHHHHH
Confidence 344555566778777765 3332211 122467899999999986 69999999999999998887
Q ss_pred cccCc
Q 002285 669 GEYNM 673 (942)
Q Consensus 669 ~~~~l 673 (942)
..+++
T Consensus 563 ~~~Gi 567 (884)
T TIGR01522 563 RRLGM 567 (884)
T ss_pred HHcCC
Confidence 76553
No 239
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=81.15 E-value=1.3 Score=45.64 Aligned_cols=39 Identities=18% Similarity=0.377 Sum_probs=34.6
Q ss_pred CCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCc
Q 002285 778 VTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 778 vnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
-+|+.+++++++.++ .+++.++++|| +.+|.+|++.++.
T Consensus 146 ~~k~~~~~~~~~~~~------~~~~~~i~iGD-s~~D~~~a~~ag~ 184 (201)
T TIGR01491 146 DNKGEAVERLKRELN------PSLTETVAVGD-SKNDLPMFEVADI 184 (201)
T ss_pred ccHHHHHHHHHHHhC------CCHHHEEEEcC-CHhHHHHHHhcCC
Confidence 479999999999887 56788999999 9999999999976
No 240
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=80.02 E-value=3.1 Score=43.57 Aligned_cols=62 Identities=21% Similarity=0.229 Sum_probs=46.0
Q ss_pred cCCEEEEEecCCccCCCC-CccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhccc
Q 002285 600 SNNRLLILGFNATLTAPV-DFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEY 671 (942)
Q Consensus 600 s~~rLi~lD~DGTL~~~~-~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~ 671 (942)
..+++++||+|+||+... ..+ . .....-|.+.+-|+.+.+ ...|+|=|..+...++..+..+
T Consensus 19 ~~kklLVLDLDeTLvh~~~~~~-----~---~~~~kRP~l~eFL~~~~~--~feIvVwTAa~~~ya~~~l~~l 81 (195)
T TIGR02245 19 EGKKLLVLDIDYTLFDHRSPAE-----T---GEELMRPYLHEFLTSAYE--DYDIVIWSATSMKWIEIKMTEL 81 (195)
T ss_pred CCCcEEEEeCCCceEcccccCC-----C---ceEEeCCCHHHHHHHHHh--CCEEEEEecCCHHHHHHHHHHh
Confidence 456899999999999752 111 0 122346789999999886 7999999998888887766653
No 241
>COG4641 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=79.89 E-value=3.5 Score=46.91 Aligned_cols=116 Identities=18% Similarity=0.283 Sum_probs=79.1
Q ss_pred EEEeCCCCCHHHHHHHHHHccEEEECCCC---CCC---ChhHHHHHhhccCCCceEEEeCCCCcccccCCceEEECCCCH
Q 002285 452 IHHLDRSLDFHALCALYAITDVALVTSLR---DGM---NLVSYEFVACQASKKGVLILSEFAGAAQSLGAGAILVNPWNI 525 (942)
Q Consensus 452 V~~l~~~v~~~el~aly~~ADv~v~pSl~---EG~---~Lv~lEamA~~~~~~G~lIlSe~~G~~~~lg~~gllVnP~D~ 525 (942)
+.+++...+...+...|+.-|+.+.=+.. ++. +.-+.|+++| +|++|.+-..++...++.+--+|--.|.
T Consensus 239 ~~yIg~~~~~~~v~~~~~~~~~~~n~~r~~~~~~l~~~~~RvFeiagc----~~~liT~~~~~~e~~f~pgk~~iv~~d~ 314 (373)
T COG4641 239 VQYIGYYNPKDGVPNAFKRDDVTLNINRASIANALFSPTNRVFEIAGC----GGFLITDYWKDLEKFFKPGKDIIVYQDS 314 (373)
T ss_pred hhhhhccCccchhhhcccccceeeeecHHHHHhhcCCchhhHHHHhhc----CCccccccHHHHHHhcCCchheEEecCH
Confidence 33333334456777778888887765442 333 8899999999 3666666556655555333333445789
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHhHHH-HhcCHHHHHHHHHHHHHH
Q 002285 526 TEVASSIGYALNMPADEREKRHLHNFMHV-TTHTSQEWAATFVSELND 572 (942)
Q Consensus 526 ~~lA~aI~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~fl~~L~~ 572 (942)
.++.+.+..++..+ +||++..+.+++.| ..|+...=+..++..+..
T Consensus 315 kdl~~~~~yll~h~-~erkeiae~~ye~V~~~ht~~~r~~~~~~~i~s 361 (373)
T COG4641 315 KDLKEKLKYLLNHP-DERKEIAECAYERVLARHTYEERIFKLLNEIAS 361 (373)
T ss_pred HHHHHHHHHHhcCc-chHHHHHHhhHHHHHHhccHHHHHHHHHHHHHH
Confidence 99999999999865 57888888887776 557777767677776665
No 242
>PRK10671 copA copper exporting ATPase; Provisional
Probab=79.69 E-value=4.1 Score=52.15 Aligned_cols=67 Identities=16% Similarity=0.229 Sum_probs=47.3
Q ss_pred hhhhcccCCEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccC
Q 002285 594 VDSYLQSNNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYN 672 (942)
Q Consensus 594 ~~~y~~s~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~ 672 (942)
.+.+.+...+++++-+||+++.... ..-.+-|...++|++|.+ .|.+++++||.+....+.....++
T Consensus 622 ~~~~~~~g~~~v~va~~~~~~g~~~-----------l~d~~r~~a~~~i~~L~~-~gi~v~~~Tgd~~~~a~~ia~~lg 688 (834)
T PRK10671 622 ITAQASQGATPVLLAVDGKAAALLA-----------IRDPLRSDSVAALQRLHK-AGYRLVMLTGDNPTTANAIAKEAG 688 (834)
T ss_pred HHHHHhCCCeEEEEEECCEEEEEEE-----------ccCcchhhHHHHHHHHHH-CCCeEEEEcCCCHHHHHHHHHHcC
Confidence 3445555677888888998763311 122356778899999876 589999999998888877666544
No 243
>PLN02954 phosphoserine phosphatase
Probab=79.40 E-value=4.2 Score=42.89 Aligned_cols=15 Identities=7% Similarity=0.171 Sum_probs=13.3
Q ss_pred CEEEEEecCCccCCC
Q 002285 602 NRLLILGFNATLTAP 616 (942)
Q Consensus 602 ~rLi~lD~DGTL~~~ 616 (942)
.++|+|||||||++.
T Consensus 12 ~k~viFDfDGTL~~~ 26 (224)
T PLN02954 12 ADAVCFDVDSTVCVD 26 (224)
T ss_pred CCEEEEeCCCcccch
Confidence 578999999999985
No 244
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=77.77 E-value=2.2 Score=44.26 Aligned_cols=42 Identities=17% Similarity=0.163 Sum_probs=35.8
Q ss_pred ECCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCc
Q 002285 775 AVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 775 p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
..+-.|..+++.++++.+ ++.+.++++|| +.+|.+|++.++.
T Consensus 151 ~~g~~K~~~l~~~~~~~~------~~~~~~~~~gD-s~~D~~~~~~a~~ 192 (202)
T TIGR01490 151 CKGEGKVHALAELLAEEQ------IDLKDSYAYGD-SISDLPLLSLVGH 192 (202)
T ss_pred CCChHHHHHHHHHHHHcC------CCHHHcEeeeC-CcccHHHHHhCCC
Confidence 345678889999998876 45688999999 9999999999976
No 245
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=77.68 E-value=4.5 Score=42.54 Aligned_cols=37 Identities=11% Similarity=-0.020 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCc
Q 002285 780 KGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 780 KG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
|..+++.+++.++ .+++.+++||| ..+|..+.+.++-
T Consensus 151 ~~~~~~~~~~~~~------~~~~~~i~igD-~~~Di~~a~~~g~ 187 (226)
T PRK13222 151 DPAPLLLACEKLG------LDPEEMLFVGD-SRNDIQAARAAGC 187 (226)
T ss_pred ChHHHHHHHHHcC------CChhheEEECC-CHHHHHHHHHCCC
Confidence 5778999999987 56789999999 9999999988864
No 246
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=77.39 E-value=4.1 Score=41.28 Aligned_cols=68 Identities=16% Similarity=0.191 Sum_probs=47.2
Q ss_pred CEEEEEecCCccCCCCCccCCC-CCc---cc------cCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhccc
Q 002285 602 NRLLILGFNATLTAPVDFLGRR-GGQ---IR------EMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEY 671 (942)
Q Consensus 602 ~rLi~lD~DGTL~~~~~~P~~~-~~~---~~------~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~ 671 (942)
++.++||+|+||+.....|... .+. ++ ..-...-|.+.+.|..|++ ...++|.|.-+...++..+..+
T Consensus 1 k~~lvlDLDeTLi~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~RPgl~eFL~~l~~--~yei~I~Ts~~~~yA~~il~~l 78 (162)
T TIGR02251 1 KKTLVLDLDETLVHSTFKMPKVDADFKVPVLIDGKIIPVYVFKRPHVDEFLERVSK--WYELVIFTASLEEYADPVLDIL 78 (162)
T ss_pred CcEEEEcCCCCcCCCCCCCCCCCCceEEEEEecCcEEEEEEEECCCHHHHHHHHHh--cCEEEEEcCCcHHHHHHHHHHH
Confidence 3579999999999765554210 000 00 0112356889999999986 4899999988888888777765
No 247
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=77.29 E-value=2.1 Score=43.72 Aligned_cols=36 Identities=3% Similarity=-0.209 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcC
Q 002285 780 KGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFE 822 (942)
Q Consensus 780 KG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~ 822 (942)
+-..+.+++++++ .+++.+++||| ..+|.+.=+.++
T Consensus 144 ~p~~~~~~~~~~~------~~~~~~l~igD-s~~di~aA~~aG 179 (188)
T PRK10725 144 APDTFLRCAQLMG------VQPTQCVVFED-ADFGIQAARAAG 179 (188)
T ss_pred ChHHHHHHHHHcC------CCHHHeEEEec-cHhhHHHHHHCC
Confidence 4457888888887 45788999999 888877655543
No 248
>PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria. This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important.
Probab=76.32 E-value=11 Score=38.71 Aligned_cols=47 Identities=19% Similarity=0.100 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHHHHHHhhcC---CCCEEEEcCCchhhHHHHHHhhCCCCeEE
Q 002285 222 FDAYKRANQMFAKVVNNIYE---EGDVVWCHDYHLMFLPQCLKEYNNNMKVG 270 (942)
Q Consensus 222 w~~Y~~vN~~fa~~i~~~~~---~~DiIwvHDyhL~llp~~Lr~~~p~~~I~ 270 (942)
|+.=...=+..++.+.+.-+ .+|+|..| +-+.-+-+||...|+++++
T Consensus 43 ~e~~~~rg~av~~a~~~L~~~Gf~PDvI~~H--~GWGe~Lflkdv~P~a~li 92 (171)
T PF12000_consen 43 FEAAVLRGQAVARAARQLRAQGFVPDVIIAH--PGWGETLFLKDVFPDAPLI 92 (171)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCEEEEc--CCcchhhhHHHhCCCCcEE
Confidence 55444444555555555443 57999999 4567777899999999877
No 249
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=73.65 E-value=7.5 Score=41.94 Aligned_cols=45 Identities=24% Similarity=0.300 Sum_probs=34.1
Q ss_pred EECCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcC
Q 002285 774 RAVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFE 822 (942)
Q Consensus 774 ~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~ 822 (942)
-|.+.-||..++++++...-.+ .+.+.|+|+|| +.||.-.-..++
T Consensus 145 C~~NmCK~~il~~~~~~~~~~g---~~~~rviYiGD-G~nD~Cp~~~L~ 189 (234)
T PF06888_consen 145 CPPNMCKGKILERLLQEQAQRG---VPYDRVIYIGD-GRNDFCPALRLR 189 (234)
T ss_pred CCCccchHHHHHHHHHHHhhcC---CCcceEEEECC-CCCCcCcccccC
Confidence 3678899999999998742111 46789999999 999976655443
No 250
>PRK11590 hypothetical protein; Provisional
Probab=73.01 E-value=1.9 Score=45.43 Aligned_cols=38 Identities=21% Similarity=0.326 Sum_probs=27.0
Q ss_pred CCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCc
Q 002285 776 VGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 776 ~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
.|-.|-..++..+ + .+.+...|.|| +.+|.+|++.++.
T Consensus 160 ~g~~K~~~l~~~~---~------~~~~~~~aY~D-s~~D~pmL~~a~~ 197 (211)
T PRK11590 160 LGHEKVAQLERKI---G------TPLRLYSGYSD-SKQDNPLLYFCQH 197 (211)
T ss_pred CChHHHHHHHHHh---C------CCcceEEEecC-CcccHHHHHhCCC
Confidence 4445555555544 3 13456689999 9999999999976
No 251
>TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases. This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources.
Probab=72.80 E-value=50 Score=41.73 Aligned_cols=150 Identities=12% Similarity=0.123 Sum_probs=102.0
Q ss_pred CCceEEEeecccccCCHHH-HHHHHHHhH--HhCCCCC-CcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcC
Q 002285 373 GRKVMLGVDRLDMIKGIPQ-KILAFEKFL--EENPSWR-DKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLT 448 (942)
Q Consensus 373 ~~~iIl~VgRLd~~KGi~~-lL~Af~~ll--~~~P~~~-~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~ 448 (942)
+..+++.+-|+..-|-... +|..+.++. ..+|+.. ..+++|.-|.+..++.. -+.+-+.|..++..||..-...+
T Consensus 526 ~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~~-aK~iIklI~~va~~iN~Dp~v~~ 604 (794)
T TIGR02093 526 NSIFDVQVKRLHEYKRQLLNVLHVIYLYNRIKEDPPKDIVPRTVIFGGKAAPGYHM-AKLIIKLINSVAEVVNNDPAVGD 604 (794)
T ss_pred cccchhhheechhhhHHHHHHhhhHHHHHHHHhCCCcCCCCeEEEEEecCCCCcHH-HHHHHHHHHHHHHHhccChhhCC
Confidence 4556778999999998777 666555443 2355431 12456655555555543 34566778888888887544445
Q ss_pred cccEEEeCCCCCHHHHHHHHHHccEEEECCCC--CCCChhHHHHHhhccCCCceEEEeCCCCccccc----C-CceEEEC
Q 002285 449 TVPIHHLDRSLDFHALCALYAITDVALVTSLR--DGMNLVSYEFVACQASKKGVLILSEFAGAAQSL----G-AGAILVN 521 (942)
Q Consensus 449 ~~pV~~l~~~v~~~el~aly~~ADv~v~pSl~--EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l----g-~~gllVn 521 (942)
...|+|+. ..+-.--..++.+|||-...|++ |.-|..-+=||.- |.+.+|..-|+..++ | .+++++-
T Consensus 605 ~lkVVFle-nY~VslAe~iipaaDvseqistag~EASGTsnMK~alN-----GaltlgtlDGanvEi~e~vG~eN~fiFG 678 (794)
T TIGR02093 605 KLKVVFVP-NYNVSLAELIIPAADLSEQISTAGKEASGTGNMKFMLN-----GALTIGTLDGANVEIREEVGAENIFIFG 678 (794)
T ss_pred ceeEEEeC-CCChHHHHHhhhhhhhhhhCCCCCccccCcchhHHHhc-----CcceeecccchhHHHHHHhCcccEEEcC
Confidence 55688775 45556666889999999999984 7777777778774 999999988887665 3 5777775
Q ss_pred CCCHHHHHH
Q 002285 522 PWNITEVAS 530 (942)
Q Consensus 522 P~D~~~lA~ 530 (942)
.+.+++.+
T Consensus 679 -~~~~ev~~ 686 (794)
T TIGR02093 679 -LTVEEVEA 686 (794)
T ss_pred -CCHHHHHH
Confidence 34555544
No 252
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=72.65 E-value=7.8 Score=41.31 Aligned_cols=37 Identities=8% Similarity=-0.115 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCc
Q 002285 780 KGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 780 KG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
+-..+.++++.++ ++++.+++||| ..+|..+-+.++-
T Consensus 153 ~p~~~~~~~~~l~------~~p~~~l~IGD-s~~Di~aA~~aG~ 189 (229)
T PRK13226 153 HPLPLLVAAERIG------VAPTDCVYVGD-DERDILAARAAGM 189 (229)
T ss_pred CHHHHHHHHHHhC------CChhhEEEeCC-CHHHHHHHHHCCC
Confidence 3456888899887 56799999999 9999998888754
No 253
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=71.61 E-value=2.5 Score=43.94 Aligned_cols=35 Identities=14% Similarity=-0.027 Sum_probs=27.0
Q ss_pred HHHHHHHHHHhcccCCCCCCCceEEEEeCCCC-CCHHHHHhcC
Q 002285 781 GAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQ-KDEDIYTFFE 822 (942)
Q Consensus 781 G~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~-nDEdMF~~~~ 822 (942)
.....++++.++ .+++.+++||| +. +|..+=+.++
T Consensus 163 ~~~~~~~~~~~~------~~~~~~~~IgD-~~~~Di~~A~~aG 198 (203)
T TIGR02252 163 PKIFQEALERAG------ISPEEALHIGD-SLRNDYQGARAAG 198 (203)
T ss_pred HHHHHHHHHHcC------CChhHEEEECC-CchHHHHHHHHcC
Confidence 356788888887 56789999999 86 7877666654
No 254
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=70.91 E-value=1.9 Score=44.73 Aligned_cols=31 Identities=6% Similarity=-0.111 Sum_probs=22.6
Q ss_pred HHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHH
Q 002285 780 KGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDI 817 (942)
Q Consensus 780 KG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdM 817 (942)
+-..+..+++.++ .+++.+++||| ..+|..+
T Consensus 163 ~p~~~~~~~~~~~------~~~~~~i~vGD-~~~Di~a 193 (197)
T TIGR01548 163 NPEPLILAAKALG------VEACHAAMVGD-TVDDIIT 193 (197)
T ss_pred CHHHHHHHHHHhC------cCcccEEEEeC-CHHHHHH
Confidence 3455677788877 45788999999 8777654
No 255
>PHA02597 30.2 hypothetical protein; Provisional
Probab=70.05 E-value=2.2 Score=44.20 Aligned_cols=32 Identities=13% Similarity=-0.049 Sum_probs=23.2
Q ss_pred HHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHh
Q 002285 780 KGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTF 820 (942)
Q Consensus 780 KG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~ 820 (942)
|-..+..+++.++ ++.+++||| ..+|..+=..
T Consensus 132 kp~~~~~a~~~~~--------~~~~v~vgD-s~~di~aA~~ 163 (197)
T PHA02597 132 KEKLFIKAKEKYG--------DRVVCFVDD-LAHNLDAAHE 163 (197)
T ss_pred cHHHHHHHHHHhC--------CCcEEEeCC-CHHHHHHHHH
Confidence 5567788888875 467899999 8877554444
No 256
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=69.74 E-value=3.4 Score=44.71 Aligned_cols=36 Identities=8% Similarity=-0.183 Sum_probs=26.4
Q ss_pred HHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcC
Q 002285 781 GAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFE 822 (942)
Q Consensus 781 G~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~ 822 (942)
-..+...++.++. .+++.+++||| ..+|..+=+.++
T Consensus 159 p~~~~~a~~~l~~-----~~~~~~l~IGD-s~~Di~aA~~aG 194 (253)
T TIGR01422 159 PWMALKNAIELGV-----YDVAACVKVGD-TVPDIEEGRNAG 194 (253)
T ss_pred HHHHHHHHHHcCC-----CCchheEEECC-cHHHHHHHHHCC
Confidence 4566778888872 13688999999 888877766664
No 257
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=68.82 E-value=2.5 Score=42.94 Aligned_cols=35 Identities=0% Similarity=-0.238 Sum_probs=27.5
Q ss_pred HHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcC
Q 002285 781 GAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFE 822 (942)
Q Consensus 781 G~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~ 822 (942)
-..+.++++.++ .+++.+++||| ..+|..+=+.++
T Consensus 145 ~~~~~~~~~~~~------~~~~~~v~IgD-~~~di~aA~~~G 179 (185)
T TIGR02009 145 PETFLLAAELLG------VSPNECVVFED-ALAGVQAARAAG 179 (185)
T ss_pred hHHHHHHHHHcC------CCHHHeEEEeC-cHhhHHHHHHCC
Confidence 456778888887 56788999999 999988766664
No 258
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=66.94 E-value=11 Score=39.21 Aligned_cols=37 Identities=11% Similarity=0.047 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCc
Q 002285 780 KGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 780 KG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
|...+..+++.++ .+++.+++||| ..+|..+=+.++-
T Consensus 133 ~~~~~~~~~~~~~------~~~~~~l~igD-~~~Di~aA~~~Gi 169 (205)
T TIGR01454 133 APDIVREALRLLD------VPPEDAVMVGD-AVTDLASARAAGT 169 (205)
T ss_pred ChHHHHHHHHHcC------CChhheEEEcC-CHHHHHHHHHcCC
Confidence 5677888888887 56788999999 8888877666643
No 259
>PRK11587 putative phosphatase; Provisional
Probab=66.85 E-value=3.2 Score=43.87 Aligned_cols=35 Identities=3% Similarity=-0.352 Sum_probs=26.5
Q ss_pred HHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcC
Q 002285 781 GAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFE 822 (942)
Q Consensus 781 G~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~ 822 (942)
.......++.++ .+++.+++||| ..+|..+=+.++
T Consensus 141 p~~~~~~~~~~g------~~p~~~l~igD-s~~di~aA~~aG 175 (218)
T PRK11587 141 PDAYLLGAQLLG------LAPQECVVVED-APAGVLSGLAAG 175 (218)
T ss_pred cHHHHHHHHHcC------CCcccEEEEec-chhhhHHHHHCC
Confidence 456677788887 56799999999 988876555543
No 260
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=66.46 E-value=4.7 Score=42.37 Aligned_cols=37 Identities=14% Similarity=-0.010 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHhcccCCCCCC-CceEEEEeCCCCCCHHHHHhcCc
Q 002285 780 KGAAIDRILGEIVRHKGLKTP-IDYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 780 KG~Av~~Ll~~l~~~~~~~~~-~d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
+...+..++++++ .. ++.+++||| ..+|..+=+.++-
T Consensus 147 ~p~~~~~a~~~~~------~~~~~~~~~igD-~~~Di~aa~~aG~ 184 (220)
T TIGR03351 147 APDLILRAMELTG------VQDVQSVAVAGD-TPNDLEAGINAGA 184 (220)
T ss_pred CHHHHHHHHHHcC------CCChhHeEEeCC-CHHHHHHHHHCCC
Confidence 5678888899887 33 588999999 9998887766653
No 261
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=66.45 E-value=3.1 Score=46.21 Aligned_cols=36 Identities=0% Similarity=-0.229 Sum_probs=28.9
Q ss_pred HHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCc
Q 002285 781 GAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 781 G~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
-..+..+++.++ .+++.+++||| ..+|..+=+.++-
T Consensus 205 p~~~~~a~~~~~------~~p~~~l~IGD-s~~Di~aA~~aG~ 240 (286)
T PLN02779 205 PDIYNLAAETLG------VDPSRCVVVED-SVIGLQAAKAAGM 240 (286)
T ss_pred HHHHHHHHHHhC------cChHHEEEEeC-CHHhHHHHHHcCC
Confidence 457888889887 46789999999 9998887776653
No 262
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=66.33 E-value=6.4 Score=41.30 Aligned_cols=37 Identities=11% Similarity=-0.031 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHhcccCCCCCCCceEEEEeCCCC-CCHHHHHhcCc
Q 002285 780 KGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQ-KDEDIYTFFEP 823 (942)
Q Consensus 780 KG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~-nDEdMF~~~~~ 823 (942)
+......+++.++ .+++.+++||| +. +|..+=+.++-
T Consensus 152 ~~~~~~~~~~~~~------~~~~~~~~igD-s~~~di~~A~~aG~ 189 (221)
T TIGR02253 152 HPKIFYAALKRLG------VKPEEAVMVGD-RLDKDIKGAKNLGM 189 (221)
T ss_pred CHHHHHHHHHHcC------CChhhEEEECC-ChHHHHHHHHHCCC
Confidence 3457788888887 46788999999 86 78877666643
No 263
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=65.49 E-value=9.6 Score=39.48 Aligned_cols=21 Identities=14% Similarity=0.055 Sum_probs=18.4
Q ss_pred CceEEEEeCCCCCCHHHHHhcC
Q 002285 801 IDYVLCIGHFLQKDEDIYTFFE 822 (942)
Q Consensus 801 ~d~vl~iGD~d~nDEdMF~~~~ 822 (942)
.+.+++||| +.+|..|.++++
T Consensus 144 ~~~~v~iGD-s~~D~~~~~aa~ 164 (205)
T PRK13582 144 GYRVIAAGD-SYNDTTMLGEAD 164 (205)
T ss_pred CCeEEEEeC-CHHHHHHHHhCC
Confidence 467999999 999999988875
No 264
>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins.
Probab=64.93 E-value=17 Score=40.06 Aligned_cols=60 Identities=15% Similarity=0.237 Sum_probs=45.1
Q ss_pred CCEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccC
Q 002285 601 NNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYN 672 (942)
Q Consensus 601 ~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~ 672 (942)
...+|+||+|-||+..... .....|.+.+.|.+|.+ .|..+++=|--+.+-+..-+..++
T Consensus 121 ~phVIVfDlD~TLItd~~~-----------v~Ir~~~v~~sL~~Lk~-~g~vLvLWSyG~~eHV~~sl~~~~ 180 (297)
T PF05152_consen 121 PPHVIVFDLDSTLITDEGD-----------VRIRDPAVYDSLRELKE-QGCVLVLWSYGNREHVRHSLKELK 180 (297)
T ss_pred CCcEEEEECCCcccccCCc-----------cccCChHHHHHHHHHHH-cCCEEEEecCCCHHHHHHHHHHhC
Confidence 3458999999999987431 12357889999999998 577888877777777776666654
No 265
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=64.77 E-value=4.6 Score=41.00 Aligned_cols=36 Identities=6% Similarity=-0.138 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcC
Q 002285 780 KGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFE 822 (942)
Q Consensus 780 KG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~ 822 (942)
+-...+.++++++ .+++.+++||| ..+|..+=+.++
T Consensus 143 ~p~~~~~~~~~~~------~~~~~~v~vgD-~~~di~aA~~aG 178 (185)
T TIGR01990 143 DPEIFLAAAEGLG------VSPSECIGIED-AQAGIEAIKAAG 178 (185)
T ss_pred ChHHHHHHHHHcC------CCHHHeEEEec-CHHHHHHHHHcC
Confidence 4667778888887 56789999999 888877655554
No 266
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=64.65 E-value=7.3 Score=42.03 Aligned_cols=38 Identities=16% Similarity=0.320 Sum_probs=20.3
Q ss_pred CChhHHHHHHHhhh-CCCCeEEEEcCCChhhHHHhhccc
Q 002285 634 LHPDLKEPLKRLCD-DPMTTVVVLSGSDRNVLDDNFGEY 671 (942)
Q Consensus 634 ~~~~~~~aL~~L~~-d~g~~V~IvSGR~~~~L~~~~~~~ 671 (942)
+.|.++++|+.|++ ..+..++|+|--.--.|+.++...
T Consensus 72 ~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~ 110 (234)
T PF06888_consen 72 IDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHH 110 (234)
T ss_pred CCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhC
Confidence 34555555555532 235556666655555555555543
No 267
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=64.53 E-value=9.4 Score=39.73 Aligned_cols=37 Identities=5% Similarity=-0.074 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCc
Q 002285 780 KGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 780 KG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
+-.++.++++.++ .+++.+++||| ..+|..+-+.++-
T Consensus 143 ~p~~~~~~~~~~~------~~~~~~~~igD-s~~d~~aa~~aG~ 179 (213)
T TIGR01449 143 HPDPLLLAAERLG------VAPQQMVYVGD-SRVDIQAARAAGC 179 (213)
T ss_pred ChHHHHHHHHHcC------CChhHeEEeCC-CHHHHHHHHHCCC
Confidence 3568889999987 56788999999 9999999888864
No 268
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=64.40 E-value=3.7 Score=44.41 Aligned_cols=36 Identities=6% Similarity=-0.125 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcC
Q 002285 780 KGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFE 822 (942)
Q Consensus 780 KG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~ 822 (942)
+...+.+++++++ .+++.+++||| ...|..+=+.++
T Consensus 166 ~p~~~~~a~~~~~------~~~~~~l~vgD-s~~Di~aA~~aG 201 (248)
T PLN02770 166 HPDPYLKALEVLK------VSKDHTFVFED-SVSGIKAGVAAG 201 (248)
T ss_pred ChHHHHHHHHHhC------CChhHEEEEcC-CHHHHHHHHHCC
Confidence 3466788888887 46788999999 888877655553
No 269
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=63.89 E-value=5.5 Score=41.98 Aligned_cols=36 Identities=3% Similarity=-0.076 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcC
Q 002285 780 KGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFE 822 (942)
Q Consensus 780 KG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~ 822 (942)
+...+..+++.++ .+++.+++||| ..+|..+=+.++
T Consensus 144 ~p~~~~~a~~~~~------~~p~~~l~igD-s~~di~aA~~aG 179 (221)
T PRK10563 144 DPALMFHAAEAMN------VNVENCILVDD-SSAGAQSGIAAG 179 (221)
T ss_pred ChHHHHHHHHHcC------CCHHHeEEEeC-cHhhHHHHHHCC
Confidence 5678888899887 56789999999 988877665554
No 270
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=63.79 E-value=15 Score=35.90 Aligned_cols=22 Identities=14% Similarity=0.061 Sum_probs=19.6
Q ss_pred CCceEEEEeCCCCCCHHHHHhcC
Q 002285 800 PIDYVLCIGHFLQKDEDIYTFFE 822 (942)
Q Consensus 800 ~~d~vl~iGD~d~nDEdMF~~~~ 822 (942)
+..+++++|| +.||+-|++.+.
T Consensus 92 ~~~k~vmVGn-GaND~laLr~AD 113 (152)
T COG4087 92 RYEKVVMVGN-GANDILALREAD 113 (152)
T ss_pred CCcEEEEecC-CcchHHHhhhcc
Confidence 5689999999 999999998874
No 271
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=63.53 E-value=5.3 Score=42.60 Aligned_cols=17 Identities=6% Similarity=-0.056 Sum_probs=14.1
Q ss_pred ccceecCCHHHHHHHHH
Q 002285 917 NARYFLGSSGDVVTLLN 933 (942)
Q Consensus 917 ~A~y~l~~~~~V~~~L~ 933 (942)
.|.|.+++++++.+.|.
T Consensus 209 ~~~~~i~~~~el~~~~~ 225 (229)
T PRK13226 209 QADVLVEQPQLLWNPAT 225 (229)
T ss_pred CCCeeeCCHHHHHHHhc
Confidence 48899999999987764
No 272
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=63.19 E-value=4.2 Score=43.72 Aligned_cols=36 Identities=14% Similarity=0.039 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHhcccCCCCCCCceEEEEeCCC-CCCHHHHHhcC
Q 002285 780 KGAAIDRILGEIVRHKGLKTPIDYVLCIGHFL-QKDEDIYTFFE 822 (942)
Q Consensus 780 KG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d-~nDEdMF~~~~ 822 (942)
+-.....+++.++ .+++.+++||| + ..|..+=+.++
T Consensus 165 ~p~~~~~a~~~~~------~~~~~~~~VGD-~~~~Di~~A~~aG 201 (238)
T PRK10748 165 FSDMYHLAAEKLN------VPIGEILHVGD-DLTTDVAGAIRCG 201 (238)
T ss_pred cHHHHHHHHHHcC------CChhHEEEEcC-CcHHHHHHHHHCC
Confidence 4556777888877 56789999999 7 47876654443
No 273
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=62.64 E-value=6.7 Score=40.52 Aligned_cols=33 Identities=18% Similarity=0.102 Sum_probs=27.1
Q ss_pred HHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcC
Q 002285 783 AIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFE 822 (942)
Q Consensus 783 Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~ 822 (942)
.+..+++.++ .++..|+++|| +.||..|++.++
T Consensus 183 ~~~~~i~~l~------~~~~~v~~vGD-g~nD~~al~~Ag 215 (215)
T PF00702_consen 183 IFLRIIKELQ------VKPGEVAMVGD-GVNDAPALKAAG 215 (215)
T ss_dssp HHHHHHHHHT------CTGGGEEEEES-SGGHHHHHHHSS
T ss_pred hHHHHHHHHh------cCCCEEEEEcc-CHHHHHHHHhCc
Confidence 5567778776 35679999999 999999999874
No 274
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=62.32 E-value=5.7 Score=41.74 Aligned_cols=37 Identities=22% Similarity=0.149 Sum_probs=22.2
Q ss_pred CChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhccc
Q 002285 634 LHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEY 671 (942)
Q Consensus 634 ~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~ 671 (942)
+.|.+.+.|+.|.+ .|..++|+||-....++.++..+
T Consensus 86 ~~~g~~~~l~~l~~-~g~~~~IvS~~~~~~~~~~l~~~ 122 (219)
T TIGR00338 86 LTEGAEELVKTLKE-KGYKVAVISGGFDLFAEHVKDKL 122 (219)
T ss_pred cCCCHHHHHHHHHH-CCCEEEEECCCcHHHHHHHHHHc
Confidence 34556666666665 46667777766665555555443
No 275
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=61.24 E-value=4.8 Score=41.11 Aligned_cols=35 Identities=9% Similarity=0.047 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhc
Q 002285 780 KGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFF 821 (942)
Q Consensus 780 KG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~ 821 (942)
+-....+++++++ .+++.+++||| ...|..+=+.+
T Consensus 143 ~p~~~~~~~~~~~------~~~~~~l~vgD-~~~di~aA~~~ 177 (184)
T TIGR01993 143 SPQAYEKALREAG------VDPERAIFFDD-SARNIAAAKAL 177 (184)
T ss_pred CHHHHHHHHHHhC------CCccceEEEeC-CHHHHHHHHHc
Confidence 3457788888887 46788999999 77765543333
No 276
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=60.84 E-value=7.9 Score=37.76 Aligned_cols=52 Identities=19% Similarity=0.199 Sum_probs=42.3
Q ss_pred EEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccCc
Q 002285 605 LILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYNM 673 (942)
Q Consensus 605 i~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l 673 (942)
.+.++++|++.- .++-+++.+.|++|.+ ...|+|+||-....+.+.....++
T Consensus 17 ~~~~v~~tiatg---------------Gklf~ev~e~iqeL~d--~V~i~IASgDr~gsl~~lae~~gi 68 (152)
T COG4087 17 KAGKVLYTIATG---------------GKLFSEVSETIQELHD--MVDIYIASGDRKGSLVQLAEFVGI 68 (152)
T ss_pred ecceEEEEEccC---------------cEEcHhhHHHHHHHHH--hheEEEecCCcchHHHHHHHHcCC
Confidence 346889998863 3567889999999997 399999999999999988876553
No 277
>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]
Probab=60.70 E-value=2.8e+02 Score=33.84 Aligned_cols=102 Identities=19% Similarity=0.212 Sum_probs=73.7
Q ss_pred cccCCHHHHHHHHHHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHH
Q 002285 384 DMIKGIPQKILAFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHA 463 (942)
Q Consensus 384 d~~KGi~~lL~Af~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~e 463 (942)
.+.|=.++.+.-.-++++.-|+- +|++.+.+ +. .+....++.++++-+. +...++| ....+.++
T Consensus 438 n~~K~~pev~~~wmqIL~~vP~S----vl~L~~~~---~~---~~~~~~l~~la~~~Gv-----~~eRL~f-~p~~~~~~ 501 (620)
T COG3914 438 NYFKITPEVFALWMQILSAVPNS----VLLLKAGG---DD---AEINARLRDLAEREGV-----DSERLRF-LPPAPNED 501 (620)
T ss_pred CcccCCHHHHHHHHHHHHhCCCc----EEEEecCC---Cc---HHHHHHHHHHHHHcCC-----Chhheee-cCCCCCHH
Confidence 46788899999999999999984 34433322 22 3466777777776432 2234554 46677889
Q ss_pred HHHHHHHccEEEECCCCCCCChhHHHHHhhccCCCceEEEeCCC
Q 002285 464 LCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFA 507 (942)
Q Consensus 464 l~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~ 507 (942)
..+-|..||+++-|=-|-| ..++.|++.+ |++|++-.+
T Consensus 502 h~a~~~iADlvLDTyPY~g-~TTa~daLwm-----~vPVlT~~G 539 (620)
T COG3914 502 HRARYGIADLVLDTYPYGG-HTTASDALWM-----GVPVLTRVG 539 (620)
T ss_pred HHHhhchhheeeecccCCC-ccchHHHHHh-----cCceeeecc
Confidence 9999999999998877655 5689999998 888887543
No 278
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=60.58 E-value=8.7 Score=40.73 Aligned_cols=51 Identities=24% Similarity=0.165 Sum_probs=33.2
Q ss_pred CCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccCceEEeecceEEE
Q 002285 632 PKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYNMWLAAENGMFLR 684 (942)
Q Consensus 632 ~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l~liaehG~~ir 684 (942)
+++.|...++++.|.+ .-+-+|+|-.-...+.+..+.++++.---||.++-
T Consensus 82 a~lvPgA~etm~~l~~--~~tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~ 132 (315)
T COG4030 82 AKLVPGAEETMATLQE--RWTPVVISTSYTQYLRRTASMIGVPRGELHGTEVD 132 (315)
T ss_pred cccCCChHHHHHHHhc--cCCceEEeccHHHHHHHHHHhcCCCcccccccccc
Confidence 4556667777777765 34445566555666777777777766666776664
No 279
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=59.48 E-value=21 Score=37.96 Aligned_cols=46 Identities=11% Similarity=0.192 Sum_probs=35.3
Q ss_pred EEEECCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhc
Q 002285 772 EVRAVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFF 821 (942)
Q Consensus 772 EV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~ 821 (942)
...|++.=||..+.++....-.+| +..+.++|+|| +.||.--.-.+
T Consensus 156 ~~CPsNmCKg~Vl~~~~~s~~~~g---v~yer~iYvGD-G~nD~CP~l~L 201 (256)
T KOG3120|consen 156 NLCPSNMCKGLVLDELVASQLKDG---VRYERLIYVGD-GANDFCPVLRL 201 (256)
T ss_pred CcCchhhhhhHHHHHHHHHHhhcC---CceeeEEEEcC-CCCCcCcchhc
Confidence 447889999999999887764333 56789999999 99997544333
No 280
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=58.88 E-value=4.7 Score=42.26 Aligned_cols=37 Identities=16% Similarity=-0.010 Sum_probs=27.9
Q ss_pred HHHHHHHHHHHh-cccCCCCCCCceEEEEeCCCC-CCHHHHHhcCc
Q 002285 780 KGAAIDRILGEI-VRHKGLKTPIDYVLCIGHFLQ-KDEDIYTFFEP 823 (942)
Q Consensus 780 KG~Av~~Ll~~l-~~~~~~~~~~d~vl~iGD~d~-nDEdMF~~~~~ 823 (942)
+......+++.+ + .+++.+++||| +. +|..+=+.++-
T Consensus 154 ~~~~~~~~~~~~~~------~~~~~~v~igD-~~~~di~~A~~~G~ 192 (224)
T TIGR02254 154 DKEIFNYALERMPK------FSKEEVLMIGD-SLTADIKGGQNAGL 192 (224)
T ss_pred CHHHHHHHHHHhcC------CCchheEEECC-CcHHHHHHHHHCCC
Confidence 456677888888 6 46788999999 87 68877666653
No 281
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=57.71 E-value=56 Score=43.22 Aligned_cols=36 Identities=17% Similarity=0.111 Sum_probs=29.6
Q ss_pred CChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcc
Q 002285 634 LHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGE 670 (942)
Q Consensus 634 ~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~ 670 (942)
+-+++.++|++|.+ .|++|+++||-...........
T Consensus 632 lq~~v~etI~~L~~-AGIkv~mlTGD~~~TA~~IA~~ 667 (1057)
T TIGR01652 632 LQEGVPETIELLRQ-AGIKIWVLTGDKVETAINIGYS 667 (1057)
T ss_pred hhhccHHHHHHHHH-CCCeEEEEcCCcHHHHHHHHHH
Confidence 55778899999887 6999999999988887766544
No 282
>PRK09449 dUMP phosphatase; Provisional
Probab=56.47 E-value=5.7 Score=41.89 Aligned_cols=36 Identities=19% Similarity=-0.032 Sum_probs=25.4
Q ss_pred HHHHHHHHHHhcccCCCCCCCceEEEEeCCCC-CCHHHHHhcC
Q 002285 781 GAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQ-KDEDIYTFFE 822 (942)
Q Consensus 781 G~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~-nDEdMF~~~~ 822 (942)
-.....+++.++. .+.+.+++||| +. +|..+=+.++
T Consensus 153 p~~~~~~~~~~~~-----~~~~~~~~vgD-~~~~Di~~A~~aG 189 (224)
T PRK09449 153 VAIFDYALEQMGN-----PDRSRVLMVGD-NLHSDILGGINAG 189 (224)
T ss_pred HHHHHHHHHHcCC-----CCcccEEEEcC-CcHHHHHHHHHCC
Confidence 3567788888862 24578999999 86 5877655554
No 283
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=55.68 E-value=5.3 Score=40.29 Aligned_cols=30 Identities=20% Similarity=0.114 Sum_probs=22.7
Q ss_pred HHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHH
Q 002285 781 GAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDI 817 (942)
Q Consensus 781 G~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdM 817 (942)
-.....+++.++ .+++.+++||| ...|..+
T Consensus 142 p~~f~~~~~~~~------~~p~~~l~vgD-~~~Di~~ 171 (175)
T TIGR01493 142 PVVYELVFDTVG------LPPDRVLMVAA-HQWDLIG 171 (175)
T ss_pred HHHHHHHHHHHC------CCHHHeEeEec-ChhhHHH
Confidence 345567788887 56899999999 8777654
No 284
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=54.66 E-value=6.6 Score=40.58 Aligned_cols=36 Identities=19% Similarity=0.030 Sum_probs=28.3
Q ss_pred HHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCc
Q 002285 781 GAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 781 G~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
-...+.+++.++ .+++.+++||| ..+|..+=+.++-
T Consensus 151 ~~~~~~~~~~~~------~~p~~~~~vgD-~~~Di~~A~~~G~ 186 (198)
T TIGR01428 151 PQVYQLALEALG------VPPDEVLFVAS-NPWDLGGAKKFGF 186 (198)
T ss_pred HHHHHHHHHHhC------CChhhEEEEeC-CHHHHHHHHHCCC
Confidence 566788888887 56789999999 8888877666653
No 285
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=53.94 E-value=20 Score=37.04 Aligned_cols=39 Identities=15% Similarity=0.220 Sum_probs=27.3
Q ss_pred EECCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCc
Q 002285 774 RAVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 774 ~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
.+-|.+|+..|+.+.+ +.+.++++|| +++|.+.=.....
T Consensus 142 s~fG~dK~~vI~~l~e----------~~e~~fy~GD-svsDlsaaklsDl 180 (220)
T COG4359 142 SQFGHDKSSVIHELSE----------PNESIFYCGD-SVSDLSAAKLSDL 180 (220)
T ss_pred cccCCCcchhHHHhhc----------CCceEEEecC-CcccccHhhhhhh
Confidence 3457888888887754 3466888999 9988876544433
No 286
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]
Probab=52.40 E-value=3e+02 Score=32.28 Aligned_cols=97 Identities=14% Similarity=0.136 Sum_probs=59.3
Q ss_pred CCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhccCCCceEEEeCCCCcccc---------cCCceEEE--CCCC
Q 002285 456 DRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQS---------LGAGAILV--NPWN 524 (942)
Q Consensus 456 ~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~---------lg~~gllV--nP~D 524 (942)
...+++. +++..||+++.. -|+|. ..|++.. |+++++--.+ .++ +| .|+.+ .+..
T Consensus 289 ~~~~p~~---~~l~~ad~vI~h---GG~gt-t~eaL~~-----gvP~vv~P~~-~DQ~~nA~rve~~G-~G~~l~~~~l~ 354 (406)
T COG1819 289 ADYVPQL---ELLPRADAVIHH---GGAGT-TSEALYA-----GVPLVVIPDG-ADQPLNAERVEELG-AGIALPFEELT 354 (406)
T ss_pred ecCCCHH---HHhhhcCEEEec---CCcch-HHHHHHc-----CCCEEEecCC-cchhHHHHHHHHcC-CceecCcccCC
Confidence 4555555 488999999975 47774 5799987 6544443222 222 23 44444 4799
Q ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHhHHHHhcCHHHHHHHHHH
Q 002285 525 ITEVASSIGYALNMPADEREKRHLHNFMHVTTHTSQEWAATFVS 568 (942)
Q Consensus 525 ~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~ 568 (942)
.+.++++|.++|+++. -+++.+++.+....++..+=+...+.
T Consensus 355 ~~~l~~av~~vL~~~~--~~~~~~~~~~~~~~~~g~~~~a~~le 396 (406)
T COG1819 355 EERLRAAVNEVLADDS--YRRAAERLAEEFKEEDGPAKAADLLE 396 (406)
T ss_pred HHHHHHHHHHHhcCHH--HHHHHHHHHHHhhhcccHHHHHHHHH
Confidence 9999999999998643 23333444455555555443333333
No 287
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=52.11 E-value=72 Score=41.64 Aligned_cols=39 Identities=15% Similarity=0.236 Sum_probs=33.7
Q ss_pred CCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccC
Q 002285 633 KLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYN 672 (942)
Q Consensus 633 ~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~ 672 (942)
.+-+++.+++++|.+ .|.+|+++||............++
T Consensus 579 plr~~~~~aI~~l~~-aGI~v~miTGD~~~tA~~iA~~~G 617 (941)
T TIGR01517 579 PLRPGVREAVQECQR-AGITVRMVTGDNIDTAKAIARNCG 617 (941)
T ss_pred CCchhHHHHHHHHHH-CCCEEEEECCCChHHHHHHHHHcC
Confidence 467899999999987 699999999999999888777654
No 288
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=51.73 E-value=8.1 Score=40.32 Aligned_cols=35 Identities=6% Similarity=0.005 Sum_probs=25.3
Q ss_pred HHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcC
Q 002285 781 GAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFE 822 (942)
Q Consensus 781 G~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~ 822 (942)
......++++++ .+++.+++||| ...|..+=+.++
T Consensus 155 p~~~~~~~~~~g------~~~~~~l~i~D-~~~di~aA~~aG 189 (211)
T TIGR02247 155 PRIYQLMLERLG------VAPEECVFLDD-LGSNLKPAAALG 189 (211)
T ss_pred HHHHHHHHHHcC------CCHHHeEEEcC-CHHHHHHHHHcC
Confidence 446778888887 56788999999 777766555543
No 289
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=51.57 E-value=15 Score=38.76 Aligned_cols=37 Identities=24% Similarity=0.309 Sum_probs=28.7
Q ss_pred CCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCcC
Q 002285 777 GVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEPE 824 (942)
Q Consensus 777 gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~~ 824 (942)
|..|..+++.+.. ..+.+++||| +.||..|.+.++..
T Consensus 142 g~~K~~~l~~~~~----------~~~~~i~iGD-g~~D~~~a~~Ad~~ 178 (214)
T TIGR03333 142 GCCKPSLIRKLSE----------PNDYHIVIGD-SVTDVEAAKQSDLC 178 (214)
T ss_pred CCCHHHHHHHHhh----------cCCcEEEEeC-CHHHHHHHHhCCee
Confidence 3568888886642 2467899999 99999999988653
No 290
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=50.54 E-value=1.1e+02 Score=37.78 Aligned_cols=146 Identities=16% Similarity=0.128 Sum_probs=75.7
Q ss_pred CCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccCceEEeecceEEEeCCCceeecccCCCChhHHHHHHHHHHH
Q 002285 633 KLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYNMWLAAENGMFLRLTTGEWMTTMPENLNMDWVDSVKHVFEY 712 (942)
Q Consensus 633 ~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l~liaehG~~ir~~~~~w~~~~~~~~~~~w~~~v~~il~~ 712 (942)
++-+.++-.|+-|.. .|.+|+..||--++.. +.++-+-+.+-| +....... +..-+..+..-++.
T Consensus 658 kLQ~dVk~tLElLRN-AgikiWMLTGDKlETA--------~ciAkSs~L~sR--~q~ihv~~----~v~sr~dah~eL~~ 722 (1051)
T KOG0210|consen 658 KLQDDVKPTLELLRN-AGIKIWMLTGDKLETA--------ICIAKSSRLFSR--GQYIHVIR----SVTSRGDAHNELNN 722 (1051)
T ss_pred HHhhhhHhHHHHHhh-cCcEEEEEcCcchhhe--------eeeehhccceec--CceEEEEE----ecCCchHHHHHHHH
Confidence 345567777777775 6999999999766554 223333333333 11112111 11124455566666
Q ss_pred HHhcCCCeeeeeecceEEEEEeccchHHhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEECCCCHHHHHHHHHHHhc
Q 002285 713 FTERTPRSHFEVRETSLVWNYKYADLEFGRLQARDILQHLWSGPISNASVDVVQGGRSVEVRAVGVTKGAAIDRILGEIV 792 (942)
Q Consensus 713 ~~~r~~Gs~iE~K~~sl~~hyr~ad~e~~~~qa~el~~~L~~~~~~~~~v~v~~G~~~vEV~p~gvnKG~Av~~Ll~~l~ 792 (942)
+...+.-+.+-+- .++ ++ ..+-..+++ -++... -..+|=.|...--|+..++-|-++-
T Consensus 723 lR~k~~~aLvi~G-~Sl---------~~---cl~yye~Ef-~el~~~-------~~aVv~CRctPtQKA~v~~llq~~t- 780 (1051)
T KOG0210|consen 723 LRRKTDCALVIDG-ESL---------EF---CLKYYEDEF-IELVCE-------LPAVVCCRCTPTQKAQVVRLLQKKT- 780 (1051)
T ss_pred hhcCCCcEEEEcC-chH---------HH---HHHHHHHHH-HHHHHh-------cCcEEEEecChhHHHHHHHHHHHhh-
Confidence 6544443333221 111 11 111111111 110111 1122334555556887776555542
Q ss_pred ccCCCCCCCceEEEEeCCCCCCHHHHHhcCcC
Q 002285 793 RHKGLKTPIDYVLCIGHFLQKDEDIYTFFEPE 824 (942)
Q Consensus 793 ~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~~ 824 (942)
...|-|||| +.||..|.++++.-
T Consensus 781 --------~krvc~IGD-GGNDVsMIq~A~~G 803 (1051)
T KOG0210|consen 781 --------GKRVCAIGD-GGNDVSMIQAADVG 803 (1051)
T ss_pred --------CceEEEEcC-CCccchheeecccc
Confidence 367899999 99999999999763
No 291
>PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like
Probab=50.50 E-value=26 Score=33.55 Aligned_cols=34 Identities=26% Similarity=0.338 Sum_probs=25.9
Q ss_pred CCCEEEEcCCch-hhHHHHHHhhCCCCeEEEEecc
Q 002285 242 EGDVVWCHDYHL-MFLPQCLKEYNNNMKVGWFLHT 275 (942)
Q Consensus 242 ~~DiIwvHDyhL-~llp~~Lr~~~p~~~I~~flH~ 275 (942)
.+|+||+|.... .+++.++++.....++.++.|.
T Consensus 74 ~~DvIh~h~~~~~~~~~~l~~~~~~~~~~i~~~hg 108 (139)
T PF13477_consen 74 KPDVIHCHTPSPYGLFAMLAKKLLKNKKVIYTVHG 108 (139)
T ss_pred CCCEEEEecCChHHHHHHHHHHHcCCCCEEEEecC
Confidence 689999999875 4556666665555888899885
No 292
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=50.32 E-value=18 Score=36.59 Aligned_cols=38 Identities=16% Similarity=0.250 Sum_probs=30.2
Q ss_pred CChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccC
Q 002285 634 LHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYN 672 (942)
Q Consensus 634 ~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~ 672 (942)
+.+.+.+.|+.|.+ .+..++|+|+.....++..+..++
T Consensus 73 l~~g~~~ll~~l~~-~g~~~~i~S~~~~~~~~~~l~~~~ 110 (188)
T TIGR01489 73 IDPGFKEFIAFIKE-HGIDFIVISDGNDFFIDPVLEGIG 110 (188)
T ss_pred CCccHHHHHHHHHH-cCCcEEEEeCCcHHHHHHHHHHcC
Confidence 44568888888876 588999999999888888776654
No 293
>KOG2116 consensus Protein involved in plasmid maintenance/nuclear protein involved in lipid metabolism [Cell motility; Lipid transport and metabolism]
Probab=50.29 E-value=20 Score=43.49 Aligned_cols=81 Identities=12% Similarity=0.127 Sum_probs=49.7
Q ss_pred ccCCEEEEEecCCccCCCCCccCCCCCccccCCC-CCChhHHHHHHHhhhCCCCeEEEEcCCChhhHH---Hhhccc-Cc
Q 002285 599 QSNNRLLILGFNATLTAPVDFLGRRGGQIREMEP-KLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLD---DNFGEY-NM 673 (942)
Q Consensus 599 ~s~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~-~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~---~~~~~~-~l 673 (942)
+-..++|+.|+|||++..- .-++-++-... --+..+..+-.++.+ .|++++-+|.|++.+.. .++..+ ..
T Consensus 527 kWn~kIVISDIDGTITKSD----vLGh~lp~iGkDWTh~GVAkLyt~Ik~-NGYk~lyLSARaIgQA~~TR~yL~nv~Qd 601 (738)
T KOG2116|consen 527 KWNDKIVISDIDGTITKSD----VLGHVLPMIGKDWTHTGVAKLYTKIKE-NGYKILYLSARAIGQADSTRQYLKNVEQD 601 (738)
T ss_pred ecCCcEEEecCCCceEhhh----hhhhhhhhhcCcchhhhHHHHHHHHHh-CCeeEEEEehhhhhhhHHHHHHHHHHhhc
Confidence 3467899999999999751 12222221111 124467777777776 69999999999987654 455544 23
Q ss_pred eEEeecceEEE
Q 002285 674 WLAAENGMFLR 684 (942)
Q Consensus 674 ~liaehG~~ir 684 (942)
+.+--.|=.+-
T Consensus 602 G~~LPdGPViL 612 (738)
T KOG2116|consen 602 GKKLPDGPVIL 612 (738)
T ss_pred CccCCCCCEEe
Confidence 44444444333
No 294
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=47.38 E-value=26 Score=36.88 Aligned_cols=37 Identities=11% Similarity=0.062 Sum_probs=29.6
Q ss_pred CCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCc
Q 002285 776 VGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 776 ~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
.+-.|...++.+ +..+ ..++++|| +.||..|++.++.
T Consensus 129 ~~~~K~~~l~~l-~~~~---------~~~v~vGD-s~nDl~ml~~Ag~ 165 (203)
T TIGR02137 129 QKDPKRQSVIAF-KSLY---------YRVIAAGD-SYNDTTMLSEAHA 165 (203)
T ss_pred CcchHHHHHHHH-HhhC---------CCEEEEeC-CHHHHHHHHhCCC
Confidence 345799988877 4443 25899999 9999999999976
No 295
>PLN02940 riboflavin kinase
Probab=47.21 E-value=13 Score=43.24 Aligned_cols=33 Identities=18% Similarity=0.112 Sum_probs=0.0
Q ss_pred EEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeE
Q 002285 603 RLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTV 653 (942)
Q Consensus 603 rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V 653 (942)
++|+||+||||++. .+...+++..+.+.-|..+
T Consensus 12 k~VIFDlDGTLvDt------------------~~~~~~a~~~~~~~~G~~~ 44 (382)
T PLN02940 12 SHVILDLDGTLLNT------------------DGIVSDVLKAFLVKYGKQW 44 (382)
T ss_pred CEEEECCcCcCCcC------------------HHHHHHHHHHHHHHcCCCC
No 296
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=47.09 E-value=67 Score=42.28 Aligned_cols=47 Identities=13% Similarity=0.083 Sum_probs=35.7
Q ss_pred cCcEEEEEECCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCc
Q 002285 767 GGRSVEVRAVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 767 G~~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
.+.++-+|..-.-|+..++.+-+.. .--+++||| +.||..|.+.+.-
T Consensus 769 C~sViCCR~sPlQKA~Vv~lVk~~~---------~~~TLAIGD-GANDVsMIQ~AhV 815 (1151)
T KOG0206|consen 769 CKSVICCRVSPLQKALVVKLVKKGL---------KAVTLAIGD-GANDVSMIQEAHV 815 (1151)
T ss_pred cCEEEEccCCHHHHHHHHHHHHhcC---------CceEEEeeC-CCccchheeeCCc
Confidence 3556667777778999998874332 355799999 9999999997754
No 297
>COG4567 Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain [Signal transduction mechanisms / Transcription]
Probab=45.93 E-value=40 Score=33.91 Aligned_cols=75 Identities=17% Similarity=0.228 Sum_probs=54.8
Q ss_pred HHHHHHHHHHc---cEEEECCCCCCCChhHHHHHhhccCCCceEEEeCCCCccccc-----CCceEEECCCCHHHHHHHH
Q 002285 461 FHALCALYAIT---DVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSL-----GAGAILVNPWNITEVASSI 532 (942)
Q Consensus 461 ~~el~aly~~A---Dv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l-----g~~gllVnP~D~~~lA~aI 532 (942)
.++-.+..+.+ -.+|---+-+|-||.++|++.....+--.+|++-++.++-.+ |..-+|-.|-|.+++..|+
T Consensus 42 ~~eal~~art~~PayAvvDlkL~~gsGL~~i~~lr~~~~d~rivvLTGy~sIATAV~AvKlGA~~YLaKPAdaDdi~aAl 121 (182)
T COG4567 42 VEEALAAARTAPPAYAVVDLKLGDGSGLAVIEALRERRADMRIVVLTGYASIATAVEAVKLGACDYLAKPADADDILAAL 121 (182)
T ss_pred HHHHHHHHhcCCCceEEEEeeecCCCchHHHHHHHhcCCcceEEEEecchHHHHHHHHHHhhhhhhcCCCCChHHHHHHH
Confidence 44444444432 223333445799999999999765555679999999887665 6667899999999999998
Q ss_pred HHH
Q 002285 533 GYA 535 (942)
Q Consensus 533 ~~a 535 (942)
.+.
T Consensus 122 ~~~ 124 (182)
T COG4567 122 LRR 124 (182)
T ss_pred hhc
Confidence 876
No 298
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=45.58 E-value=11 Score=38.37 Aligned_cols=33 Identities=24% Similarity=0.248 Sum_probs=27.1
Q ss_pred CHHHHHHHH---HHHhcccCCCCCCCceEEEEeCCCCCCHHHHH
Q 002285 779 TKGAAIDRI---LGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYT 819 (942)
Q Consensus 779 nKG~Av~~L---l~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~ 819 (942)
+|..+++++ ... + .+.+.++++|| +.+|.+|++
T Consensus 157 ~K~~~l~~~~~~~~~-~------~~~~~~~~iGD-s~~D~~~lr 192 (192)
T PF12710_consen 157 GKAEALKELYIRDEE-D------IDPDRVIAIGD-SINDLPMLR 192 (192)
T ss_dssp HHHHHHHHHHHHHHH-T------HTCCEEEEEES-SGGGHHHHH
T ss_pred cHHHHHHHHHHHhhc-C------CCCCeEEEEEC-CHHHHHHhC
Confidence 699999999 332 3 34688999999 999999985
No 299
>COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) [DNA replication, recombination, and repair]
Probab=45.32 E-value=91 Score=31.04 Aligned_cols=73 Identities=19% Similarity=0.258 Sum_probs=51.4
Q ss_pred HHHHHHHHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHH
Q 002285 391 QKILAFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAI 470 (942)
Q Consensus 391 ~lL~Af~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ 470 (942)
.-+.++..+.+++ ++..|.||.|-.-++..+. ..+.+++.+.++..+|+ .||++....++-.+-...+..
T Consensus 40 ~~~~~l~~li~~~-----~~~~vVVGlP~~m~g~~~~-~~~~~~~f~~~L~~r~~----lpv~l~DERltTv~A~~~L~~ 109 (141)
T COG0816 40 QDFNALLKLVKEY-----QVDTVVVGLPLNMDGTEGP-RAELARKFAERLKKRFN----LPVVLWDERLSTVEAERMLIE 109 (141)
T ss_pred hhHHHHHHHHHHh-----CCCEEEEecCcCCCCCcch-hHHHHHHHHHHHHHhcC----CCEEEEcCccCHHHHHHHHHH
Confidence 3456666666665 2667778999876766655 56678888888888876 589888877777666666665
Q ss_pred ccE
Q 002285 471 TDV 473 (942)
Q Consensus 471 ADv 473 (942)
+|+
T Consensus 110 ~~~ 112 (141)
T COG0816 110 AGV 112 (141)
T ss_pred cCC
Confidence 443
No 300
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=44.15 E-value=33 Score=41.92 Aligned_cols=63 Identities=21% Similarity=0.340 Sum_probs=50.5
Q ss_pred ccCCEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccCc
Q 002285 599 QSNNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYNM 673 (942)
Q Consensus 599 ~s~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l 673 (942)
+...+.++++.||+++.... ....+.|++.++|++|.+ .|..++|+||......+...+.+++
T Consensus 382 ~~g~~~~~~~~~~~~~g~~~-----------~~d~l~~~a~e~i~~Lk~-~Gi~v~ilSgd~~~~a~~ia~~lgi 444 (562)
T TIGR01511 382 EQGSTSVLVAVNGELAGVFA-----------LEDQLRPEAKEVIQALKR-RGIEPVMLTGDNRKTAKAVAKELGI 444 (562)
T ss_pred hCCCEEEEEEECCEEEEEEE-----------ecccccHHHHHHHHHHHH-cCCeEEEEcCCCHHHHHHHHHHcCC
Confidence 34568889999999875421 133577899999999987 5899999999999999988887765
No 301
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=43.38 E-value=50 Score=40.45 Aligned_cols=33 Identities=18% Similarity=0.133 Sum_probs=26.2
Q ss_pred CHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcC
Q 002285 779 TKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFE 822 (942)
Q Consensus 779 nKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~ 822 (942)
+|...++++.+. .+.++++|| +.||.+|++.++
T Consensus 454 ~K~~~v~~l~~~----------~~~v~~VGD-g~nD~~al~~A~ 486 (562)
T TIGR01511 454 DKAALIKELQEK----------GRVVAMVGD-GINDAPALAQAD 486 (562)
T ss_pred HHHHHHHHHHHc----------CCEEEEEeC-CCccHHHHhhCC
Confidence 777777776542 467999999 999999998874
No 302
>PF11440 AGT: DNA alpha-glucosyltransferase; InterPro: IPR016223 The T4 bacteriophage of E.coli protects its DNA via two glycosyltransferases which glucosylate 5-hydroxymethyl cytosines (5-HMC) using UDP-glucose. These two proteins are the retaining alpha-glucosyltransferase (AGT) and the inverting beta-glucosyltransferase (BGT). The proteins in this family are AGT. AGT adopts the GT-B fold and binds both the sugar donor and acceptor to the C-terminal domain. There is evidence for a role of AGT in the base-flipping mechanism and for its specific recognition of the acceptor base [].; PDB: 1YA6_B 1Y8Z_B 1Y6F_B 1XV5_A 1Y6G_B.
Probab=43.04 E-value=5.2e+02 Score=28.89 Aligned_cols=264 Identities=14% Similarity=0.135 Sum_probs=122.7
Q ss_pred HHHHHhhcCCCCEEEEcCCchhhH--------HHHHHhhCCCCeEEEEeccCCCChhHhhcCCchHHHHHHhhhccEEee
Q 002285 233 AKVVNNIYEEGDVVWCHDYHLMFL--------PQCLKEYNNNMKVGWFLHTPFPSSEIHRTLPSRTELLRSVLAADLVGF 304 (942)
Q Consensus 233 a~~i~~~~~~~DiIwvHDyhL~ll--------p~~Lr~~~p~~~I~~flH~PfP~~e~fr~lp~r~~il~~ll~aDlIgF 304 (942)
++.+++.+++.||+.+..|-.--+ -.+|.+..|.++++.|.|-- +.-..+..|. |...|..+|+|--
T Consensus 52 ~de~v~~vN~yDI~m~nSvPa~~vqE~~iNnY~kii~~Ik~~ik~V~~~Hdh--~~lsI~rn~~---le~~m~~~DvIfs 126 (355)
T PF11440_consen 52 YDETVKKVNDYDIVMFNSVPATKVQEAIINNYEKIIKKIKPSIKVVGFMHDH--NKLSIDRNPY---LEGTMNEMDVIFS 126 (355)
T ss_dssp HHHHHHHHTSSSEEEEEE--BTTS-HHHHHHHHHHHHCS-TTSEEEEEE-----SHHHHTTBSS---HHHHHHH-SEEEE
T ss_pred HHHHHHHhhccCEEEEecccCchHHHHHHHHHHHHHHhccccceeEEEeecc--ceeecccccc---HHHHHHhhcEEEe
Confidence 345666678999999998764322 34566667788877777742 3334455564 4455556899853
Q ss_pred cCHHHHHHHHHHHHHHhccccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHh-c--CCceE---E
Q 002285 305 HTYDYARHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERF-A--GRKVM---L 378 (942)
Q Consensus 305 ~t~~~~~~Fl~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~-~--~~~iI---l 378 (942)
|.. -..|.+.....+-.+ .+..+.+..++..+-+ |++.. -+...|..| . .++.+ +
T Consensus 127 hs~--~g~f~kv~m~~l~Ps----~~~l~~~i~~~p~v~n------fqpp~-------~i~~~Rstywkd~se~nmnv~~ 187 (355)
T PF11440_consen 127 HSD--NGWFSKVLMKELLPS----KVSLFDRIKKFPMVFN------FQPPM-------DINKYRSTYWKDVSEKNMNVNR 187 (355)
T ss_dssp S-T--TSHHHHTHHHHHS-S----S--SSS-------EEE----------B--------HHHHHHHH---GGGSEEEEEE
T ss_pred ccc--cchHHHHHHHhhccc----cCchhhhhhhcceeee------cCCcc-------cHHHHHHHHhhhhHhhhcccce
Confidence 332 245665544222211 2222222222222211 22211 122233333 1 22333 6
Q ss_pred EeecccccCCHHHHHHHHHHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHH------HHH-HHHhhccccCCcCccc
Q 002285 379 GVDRLDMIKGIPQKILAFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQ------VHE-IVGRINGRYGTLTTVP 451 (942)
Q Consensus 379 ~VgRLd~~KGi~~lL~Af~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~------l~~-lv~~IN~~~~~~~~~p 451 (942)
++||..-.||..+.++--+++++. |++. .++= |.. |+ +..-.+.+. ... .+.+++. ....|
T Consensus 188 yigR~Tt~kG~~~mfD~h~~~lK~-~~~~--t~~~--Gie-rS--~A~~~i~d~~~~~~y~~~~~~~~~~~----~pN~~ 255 (355)
T PF11440_consen 188 YIGRQTTWKGPRRMFDLHEKILKP-AGFK--TIME--GIE-RS--PAKISIKDHGIPYEYYPKLDCDEPKP----APNSP 255 (355)
T ss_dssp EE--SSGGG-HHHHHHHHHHTTTT-TT-E--EEEE------SS--THHHHHHHTT--EEEE-CTGGGG-------SSS--
T ss_pred eeeeeeeecCcHHHhhhHHHhcCC-cchh--HHhh--hhh-cC--CceeeeecCCcccccCccccccCccc----CCCCc
Confidence 999999999999999999998876 6653 3332 221 11 222222211 000 0111110 11234
Q ss_pred EEEeCCCCCHHHHHHHHHHccEEEECCC------CCCCChhHHHHHhhccCCCceEEEeCCCCcc--------ccc--CC
Q 002285 452 IHHLDRSLDFHALCALYAITDVALVTSL------RDGMNLVSYEFVACQASKKGVLILSEFAGAA--------QSL--GA 515 (942)
Q Consensus 452 V~~l~~~v~~~el~aly~~ADv~v~pSl------~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~--------~~l--g~ 515 (942)
+..++..+ .+|....++.+-..+--|- .+.|-.+-+|-+|| +..+|-=...|-. +.+ ..
T Consensus 256 ~~v~~~Yi-~~E~~~~Maks~Fgy~~~k~~~~y~~r~mEYt~iE~~A~----GtIPVF~k~~GEN~r~~~D~~~~~~~~~ 330 (355)
T PF11440_consen 256 VPVYGPYI-RSEGLERMAKSLFGYQLSKLQQKYLQRSMEYTQIELIAV----GTIPVFDKSWGENNRFTLDGTRYIDHPY 330 (355)
T ss_dssp EEEESS---HHHHHHHHHTEEEEEE-----GGG-SS---HHHHHHHHC----TSEEEEEHHHHHHSB-TTTSSBGGSS--
T ss_pred ceecchhh-hHHHHHHHhhccceeecHHHHHHHHHhhhhhheeeeeee----ceeeeeeccccccceeeecCceeeccCc
Confidence 55555555 5677777776655554443 24588999999999 2345544322211 111 34
Q ss_pred ceEEECCCCHHHHHHHHHHHhC
Q 002285 516 GAILVNPWNITEVASSIGYALN 537 (942)
Q Consensus 516 ~gllVnP~D~~~lA~aI~~aL~ 537 (942)
+++.++-.|.++..+.|.++-+
T Consensus 331 ~~I~~De~dle~T~ekl~E~a~ 352 (355)
T PF11440_consen 331 SAIYFDENDLESTVEKLIEVAN 352 (355)
T ss_dssp S-EEE-TTSHHHHHHHHHHHHT
T ss_pred ceeEeccchHHHHHHHHHHHhc
Confidence 6889999999999999988754
No 303
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=42.30 E-value=50 Score=39.04 Aligned_cols=83 Identities=17% Similarity=0.159 Sum_probs=56.5
Q ss_pred ChhhhhhhhcccCCEEEEEecCCccCCCC-CccCCCCCccc-cCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHH
Q 002285 589 PIKGAVDSYLQSNNRLLILGFNATLTAPV-DFLGRRGGQIR-EMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDD 666 (942)
Q Consensus 589 ~~~~~~~~y~~s~~rLi~lD~DGTL~~~~-~~P~~~~~~~~-~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~ 666 (942)
.+..++.+-.....|.++||+|+||..-+ .+-|-.+=++. ......-.+..+.+..|.+ .|..++|+|=-...+.++
T Consensus 209 ei~Sl~~A~~g~~kK~LVLDLDNTLWGGVIGedGv~GI~Ls~~~~G~~fk~fQ~~Ik~l~k-qGVlLav~SKN~~~da~e 287 (574)
T COG3882 209 EIASLLAAMSGKSKKALVLDLDNTLWGGVIGEDGVDGIRLSNSAEGEAFKTFQNFIKGLKK-QGVLLAVCSKNTEKDAKE 287 (574)
T ss_pred HHHHHHHHhhCcccceEEEecCCcccccccccccccceeecCCCCchhHHHHHHHHHHHHh-ccEEEEEecCCchhhHHH
Confidence 35567777778889999999999998632 11110000110 0111234567888889886 699999999999999998
Q ss_pred hhcccC
Q 002285 667 NFGEYN 672 (942)
Q Consensus 667 ~~~~~~ 672 (942)
.|..-+
T Consensus 288 vF~khp 293 (574)
T COG3882 288 VFRKHP 293 (574)
T ss_pred HHhhCC
Confidence 887653
No 304
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=41.43 E-value=52 Score=35.97 Aligned_cols=83 Identities=16% Similarity=0.216 Sum_probs=0.0
Q ss_pred Chhhhhhhhccc-CCEEEEEecCCccCCCCCccCCCCCcc---------------------------------ccCCCCC
Q 002285 589 PIKGAVDSYLQS-NNRLLILGFNATLTAPVDFLGRRGGQI---------------------------------REMEPKL 634 (942)
Q Consensus 589 ~~~~~~~~y~~s-~~rLi~lD~DGTL~~~~~~P~~~~~~~---------------------------------~~~~~~~ 634 (942)
+++++.+...+. ..-|++||+|-||+... .+ .+... ......+
T Consensus 6 s~~eV~~~~~~~~~~tLvvfDiDdTLi~~~-~~--lg~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~l~~i~~~~~~~li 82 (252)
T PF11019_consen 6 SFHEVQDYLENADQDTLVVFDIDDTLITPK-QP--LGSPAWYQWQLGKLQKRGKSEYKAVECIFEEWLSLIFELRKMELI 82 (252)
T ss_pred CHHHHHHHHHcCCCCeEEEEEcchhhhcCc-cc--cCCchhHHHHHHHHHhhccchhhhhhHHHHHHHHHHHhhcceEEc
Q ss_pred ChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhccc-CceE
Q 002285 635 HPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEY-NMWL 675 (942)
Q Consensus 635 ~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~-~l~l 675 (942)
.+.+.+.|..|+. .+.+|+.+|.|+.......+..+ .+++
T Consensus 83 e~~~~~~i~~lq~-~~~~v~alT~~~~~~~~~t~~~Lk~~gi 123 (252)
T PF11019_consen 83 ESDVPNIINSLQN-KGIPVIALTARGPNMEDWTLRELKSLGI 123 (252)
T ss_pred chhHHHHHHHHHH-CCCcEEEEcCCChhhHHHHHHHHHHCCC
No 305
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=41.37 E-value=14 Score=38.16 Aligned_cols=15 Identities=7% Similarity=0.333 Sum_probs=11.2
Q ss_pred CEE-EEEecCCccCCC
Q 002285 602 NRL-LILGFNATLTAP 616 (942)
Q Consensus 602 ~rL-i~lD~DGTL~~~ 616 (942)
+++ |++|+||||++.
T Consensus 1 ~~i~I~iDiDgVLad~ 16 (191)
T PF06941_consen 1 RKIRIAIDIDGVLADF 16 (191)
T ss_dssp --EEEEEESBTTTB-H
T ss_pred CCcEEEEECCCCCccc
Confidence 467 999999999986
No 306
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=40.87 E-value=16 Score=38.24 Aligned_cols=16 Identities=13% Similarity=0.210 Sum_probs=14.4
Q ss_pred CCEEEEEecCCccCCC
Q 002285 601 NNRLLILGFNATLTAP 616 (942)
Q Consensus 601 ~~rLi~lD~DGTL~~~ 616 (942)
..+.|+||+||||++.
T Consensus 3 ~~k~i~FD~d~TL~d~ 18 (229)
T COG1011 3 MIKAILFDLDGTLLDF 18 (229)
T ss_pred ceeEEEEecCCccccc
Confidence 4688999999999997
No 307
>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I. This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=40.82 E-value=4.2e+02 Score=29.37 Aligned_cols=23 Identities=17% Similarity=0.159 Sum_probs=20.0
Q ss_pred CCCCCHHHHHHHHHHccEEEECC
Q 002285 456 DRSLDFHALCALYAITDVALVTS 478 (942)
Q Consensus 456 ~~~v~~~el~aly~~ADv~v~pS 478 (942)
.+..+..++.++++.||++|-+-
T Consensus 240 ~g~~sL~el~ali~~a~l~I~~D 262 (319)
T TIGR02193 240 LPKMSLAEVAALLAGADAVVGVD 262 (319)
T ss_pred cCCCCHHHHHHHHHcCCEEEeCC
Confidence 46778999999999999999764
No 308
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=40.60 E-value=63 Score=35.18 Aligned_cols=37 Identities=3% Similarity=-0.309 Sum_probs=27.5
Q ss_pred HHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCc
Q 002285 781 GAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 781 G~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
-..+..+++.++. .+++.+++||| ..+|..+=+.++-
T Consensus 161 p~~~~~a~~~l~~-----~~~~e~l~IGD-s~~Di~aA~~aG~ 197 (267)
T PRK13478 161 PWMALKNAIELGV-----YDVAACVKVDD-TVPGIEEGLNAGM 197 (267)
T ss_pred hHHHHHHHHHcCC-----CCCcceEEEcC-cHHHHHHHHHCCC
Confidence 4567788888872 13588999999 9998877666653
No 309
>KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair]
Probab=40.32 E-value=27 Score=40.05 Aligned_cols=57 Identities=14% Similarity=0.254 Sum_probs=36.9
Q ss_pred ccCCEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcC
Q 002285 599 QSNNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSG 658 (942)
Q Consensus 599 ~s~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSG 658 (942)
+-..+++.|||||||++... +.--..-+.+-..+.++...-|+.|.+ +|+.++|-|-
T Consensus 72 ~~~~K~i~FD~dgtlI~t~s--g~vf~~~~~dw~~l~~~vp~Klktl~~-~g~~l~iftn 128 (422)
T KOG2134|consen 72 NGGSKIIMFDYDGTLIDTKS--GKVFPKGSMDWRILFPEVPSKLKTLYQ-DGIKLFIFTN 128 (422)
T ss_pred CCCcceEEEecCCceeecCC--cceeeccCccceeeccccchhhhhhcc-CCeEEEEEec
Confidence 34568999999999998632 100000000223456777788899987 6999999774
No 310
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=40.06 E-value=16 Score=37.99 Aligned_cols=31 Identities=3% Similarity=-0.032 Sum_probs=23.6
Q ss_pred HHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHH
Q 002285 780 KGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDI 817 (942)
Q Consensus 780 KG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdM 817 (942)
+....+.+++.++ .+++.+++||| ...|..+
T Consensus 143 ~p~~~~~~~~~~~------~~p~~~l~vgD-~~~di~a 173 (199)
T PRK09456 143 EARIYQHVLQAEG------FSAADAVFFDD-NADNIEA 173 (199)
T ss_pred CHHHHHHHHHHcC------CChhHeEEeCC-CHHHHHH
Confidence 4666778888887 57899999999 7666433
No 311
>TIGR00661 MJ1255 conserved hypothetical protein. This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.
Probab=39.77 E-value=76 Score=35.55 Aligned_cols=69 Identities=14% Similarity=0.087 Sum_probs=46.8
Q ss_pred HHHHHHHHHccEEEECCCCCCCChhHHHHHhhccCCCceEEEeCCCCccccc--------CCceEEECCCCHHHHHHHHH
Q 002285 462 HALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSL--------GAGAILVNPWNITEVASSIG 533 (942)
Q Consensus 462 ~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l--------g~~gllVnP~D~~~lA~aI~ 533 (942)
+++.++|..||++|.-+ |++ ++.|++++ +.|+|+....|-.++. -..|+.++..+. ++.+++.
T Consensus 239 ~~~~~~l~~ad~vI~~~---G~~-t~~Ea~~~----g~P~l~ip~~~~~eQ~~na~~l~~~g~~~~l~~~~~-~~~~~~~ 309 (321)
T TIGR00661 239 DNFKELIKNAELVITHG---GFS-LISEALSL----GKPLIVIPDLGQFEQGNNAVKLEDLGCGIALEYKEL-RLLEAIL 309 (321)
T ss_pred HHHHHHHHhCCEEEECC---ChH-HHHHHHHc----CCCEEEEcCCCcccHHHHHHHHHHCCCEEEcChhhH-HHHHHHH
Confidence 68999999999999877 554 58899999 3466666666544432 134677776666 5555555
Q ss_pred HHhCCC
Q 002285 534 YALNMP 539 (942)
Q Consensus 534 ~aL~m~ 539 (942)
..++++
T Consensus 310 ~~~~~~ 315 (321)
T TIGR00661 310 DIRNMK 315 (321)
T ss_pred hccccc
Confidence 555543
No 312
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=39.28 E-value=36 Score=29.44 Aligned_cols=34 Identities=9% Similarity=0.083 Sum_probs=27.5
Q ss_pred HHHHHHHHhcccCCCCCCCceEEEEeCCC-CCCHHHHHhcCc
Q 002285 783 AIDRILGEIVRHKGLKTPIDYVLCIGHFL-QKDEDIYTFFEP 823 (942)
Q Consensus 783 Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d-~nDEdMF~~~~~ 823 (942)
.+..+++.++ .+++.+++||| . .+|..+=+.++-
T Consensus 9 ~~~~a~~~~~------~~~~~~~~VGD-~~~~Di~~a~~~G~ 43 (75)
T PF13242_consen 9 MLEQALKRLG------VDPSRCVMVGD-SLETDIEAAKAAGI 43 (75)
T ss_dssp HHHHHHHHHT------SGGGGEEEEES-STTTHHHHHHHTTS
T ss_pred HHHHHHHHcC------CCHHHEEEEcC-CcHhHHHHHHHcCC
Confidence 4566777776 56788999999 8 999999888865
No 313
>KOG1618 consensus Predicted phosphatase [General function prediction only]
Probab=38.83 E-value=30 Score=38.74 Aligned_cols=41 Identities=20% Similarity=0.250 Sum_probs=30.3
Q ss_pred CEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCC---CeEEEEc
Q 002285 602 NRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPM---TTVVVLS 657 (942)
Q Consensus 602 ~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g---~~V~IvS 657 (942)
.--|+||+||.|.- ..++-++..++|+.|.++.| +.++++|
T Consensus 35 ~fgfafDIDGVL~R---------------G~~~i~~~~~Alr~L~~~~g~lkIP~vfLT 78 (389)
T KOG1618|consen 35 TFGFAFDIDGVLFR---------------GHRPIPGALKALRRLVDNQGQLKIPFVFLT 78 (389)
T ss_pred ceeEEEecccEEEe---------------cCCCCcchHHHHHHHHhcCCCeeccEEEEe
Confidence 34699999999985 34567889999999997643 4455544
No 314
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=38.67 E-value=6.2e+02 Score=28.54 Aligned_cols=194 Identities=11% Similarity=0.082 Sum_probs=0.0
Q ss_pred CCEEEEcCCchhhHHHHHHhhCCCCeEEEEeccCCCChhHhhcCCchHHHHHHhhhccEEeecCHHHHHHHHHHHHHHhc
Q 002285 243 GDVVWCHDYHLMFLPQCLKEYNNNMKVGWFLHTPFPSSEIHRTLPSRTELLRSVLAADLVGFHTYDYARHFVSACTRILG 322 (942)
Q Consensus 243 ~DiIwvHDyhL~llp~~Lr~~~p~~~I~~flH~PfP~~e~fr~lp~r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~l~ 322 (942)
+|+|.--.-+-..+..+||+..........+-.|--....|- +.
T Consensus 58 pdLiIsaGr~t~~~~~~l~r~~gg~~~~V~i~~P~~~~~~FD------------------------------------lv 101 (311)
T PF06258_consen 58 PDLIISAGRRTAPAALALRRASGGRTKTVQIMDPRLPPRPFD------------------------------------LV 101 (311)
T ss_pred CcEEEECCCchHHHHHHHHHHcCCCceEEEEcCCCCCccccC------------------------------------EE
Q ss_pred cccCCCceecCCeeeEEEEeeCccCccccchhcCChhhHHHHHHHHHHh---cCCceEEEee----cccccCC-HHHHHH
Q 002285 323 LEGTPEGVEDQGRLTRVAAFPIGIDSDRFVRALELPQVQDHINELKERF---AGRKVMLGVD----RLDMIKG-IPQKIL 394 (942)
Q Consensus 323 ~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIl~Vg----RLd~~KG-i~~lL~ 394 (942)
+....+.+.-+..-......|+.|+++.+. +....+..++ +...+.+-|| +...... ...++.
T Consensus 102 i~p~HD~~~~~~Nvl~t~ga~~~i~~~~l~---------~a~~~~~~~~~~l~~p~~avLIGG~s~~~~~~~~~~~~l~~ 172 (311)
T PF06258_consen 102 IVPEHDRLPRGPNVLPTLGAPNRITPERLA---------EAAAAWAPRLAALPRPRVAVLIGGDSKHYRWDEEDAERLLD 172 (311)
T ss_pred EECcccCcCCCCceEecccCCCcCCHHHHH---------HHHHhhhhhhccCCCCeEEEEECcCCCCcccCHHHHHHHHH
Q ss_pred HHHHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHHHHccEE
Q 002285 395 AFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALYAITDVA 474 (942)
Q Consensus 395 Af~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly~~ADv~ 474 (942)
.+..+.+.++ .. +.|...-|+.......|++.+... +-.++...-+..=+.++|..||.+
T Consensus 173 ~l~~~~~~~~-~~-----~~vttSRRTp~~~~~~L~~~~~~~--------------~~~~~~~~~~~nPy~~~La~ad~i 232 (311)
T PF06258_consen 173 QLAALAAAYG-GS-----LLVTTSRRTPPEAEAALRELLKDN--------------PGVYIWDGTGENPYLGFLAAADAI 232 (311)
T ss_pred HHHHHHHhCC-Ce-----EEEEcCCCCcHHHHHHHHHhhcCC--------------CceEEecCCCCCcHHHHHHhCCEE
Q ss_pred EECCCCCCCChhHHHHHhhccCCCceEEEeCCCC
Q 002285 475 LVTSLRDGMNLVSYEFVACQASKKGVLILSEFAG 508 (942)
Q Consensus 475 v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G 508 (942)
++|. |..+|+ .||+++ +.+|.+-+..+
T Consensus 233 ~VT~--DSvSMv-sEA~~t----G~pV~v~~l~~ 259 (311)
T PF06258_consen 233 VVTE--DSVSMV-SEAAAT----GKPVYVLPLPG 259 (311)
T ss_pred EEcC--ccHHHH-HHHHHc----CCCEEEecCCC
No 315
>COG5083 SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only]
Probab=38.16 E-value=19 Score=41.72 Aligned_cols=80 Identities=15% Similarity=0.168 Sum_probs=47.9
Q ss_pred ccCCEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccCceEEee
Q 002285 599 QSNNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYNMWLAAE 678 (942)
Q Consensus 599 ~s~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l~liae 678 (942)
+...+++++|+|||++.... -++..+-+- .---+..+...-.++.+ .|..|.-.|.|++..+..--. .+..+++
T Consensus 372 r~n~kiVVsDiDGTITkSD~-~Ghv~~miG--kdwth~gVAkLYtdI~r-NGYkI~YltsR~~Gqa~sTrs--ylrnieQ 445 (580)
T COG5083 372 RNNKKIVVSDIDGTITKSDA-LGHVKQMIG--KDWTHNGVAKLYTDIDR-NGYKIKYLTSRSYGQADSTRS--YLRNIEQ 445 (580)
T ss_pred eCCCcEEEEecCCcEEehhh-HHHHHHHhc--cchhhcchhhhhhhhcc-CceEEEEEecccccchhhhhh--HHHhhhh
Confidence 46788999999999997510 000000000 00123345556666654 577888899999887653322 2456888
Q ss_pred cceEEE
Q 002285 679 NGMFLR 684 (942)
Q Consensus 679 hG~~ir 684 (942)
||+.+-
T Consensus 446 ngykLp 451 (580)
T COG5083 446 NGYKLP 451 (580)
T ss_pred cCccCC
Confidence 887663
No 316
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=38.05 E-value=45 Score=34.30 Aligned_cols=81 Identities=11% Similarity=0.044 Sum_probs=51.5
Q ss_pred ChhhhhhhhcccCCEEEEEecCCccCCCCCccCC-CCC--ccc------------------cCCCCCChhHHHHHHHhhh
Q 002285 589 PIKGAVDSYLQSNNRLLILGFNATLTAPVDFLGR-RGG--QIR------------------EMEPKLHPDLKEPLKRLCD 647 (942)
Q Consensus 589 ~~~~~~~~y~~s~~rLi~lD~DGTL~~~~~~P~~-~~~--~~~------------------~~~~~~~~~~~~aL~~L~~ 647 (942)
++.++..+..--+.-.+-||+|.|++=.. |.- ++. ..| -+.-.++.+....|-....
T Consensus 50 SvaqI~~SLeG~~Pi~VsFDIDDTvLFsS--p~F~~Gk~~~sPgs~DyLknq~FW~~vn~g~D~~SIPKevA~qLI~MHq 127 (237)
T COG3700 50 SVAQIENSLEGRPPIAVSFDIDDTVLFSS--PGFWRGKKYFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQ 127 (237)
T ss_pred EHHHHHhhhcCCCCeeEeeccCCeeEecc--cccccCccccCCChHHhhcCHHHHHHHhcCCccccchHHHHHHHHHHHH
Confidence 34455555555566678889999988542 210 010 011 1233577777777777777
Q ss_pred CCCCeEEEEcCCChhhHHHhhccc
Q 002285 648 DPMTTVVVLSGSDRNVLDDNFGEY 671 (942)
Q Consensus 648 d~g~~V~IvSGR~~~~L~~~~~~~ 671 (942)
..|-.|+.+|||+...++..-+.+
T Consensus 128 ~RGD~i~FvTGRt~gk~d~vsk~L 151 (237)
T COG3700 128 RRGDAIYFVTGRTPGKTDTVSKTL 151 (237)
T ss_pred hcCCeEEEEecCCCCcccccchhH
Confidence 789999999999998776554444
No 317
>PRK06769 hypothetical protein; Validated
Probab=37.88 E-value=48 Score=33.77 Aligned_cols=35 Identities=9% Similarity=-0.089 Sum_probs=25.2
Q ss_pred HHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcC
Q 002285 781 GAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFE 822 (942)
Q Consensus 781 G~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~ 822 (942)
-..+..+++.++ .+++.+++||| ..+|..+=+.++
T Consensus 96 p~~~~~~~~~l~------~~p~~~i~IGD-~~~Di~aA~~aG 130 (173)
T PRK06769 96 TGMLLQAAEKHG------LDLTQCAVIGD-RWTDIVAAAKVN 130 (173)
T ss_pred HHHHHHHHHHcC------CCHHHeEEEcC-CHHHHHHHHHCC
Confidence 345667778776 56789999999 777766655554
No 318
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=37.55 E-value=78 Score=32.25 Aligned_cols=36 Identities=8% Similarity=-0.043 Sum_probs=27.9
Q ss_pred HHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCc
Q 002285 781 GAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 781 G~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
-..+..+++.++ .+++.+++||| ..+|..+-+.++-
T Consensus 106 p~~~~~~~~~l~------~~~~~~~~VgD-s~~Di~~A~~aG~ 141 (181)
T PRK08942 106 PGMLLSIAERLN------IDLAGSPMVGD-SLRDLQAAAAAGV 141 (181)
T ss_pred HHHHHHHHHHcC------CChhhEEEEeC-CHHHHHHHHHCCC
Confidence 456677888887 56789999999 9888877777653
No 319
>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional
Probab=37.19 E-value=6.6e+02 Score=28.41 Aligned_cols=27 Identities=19% Similarity=0.195 Sum_probs=22.3
Q ss_pred EEEeCCCCCHHHHHHHHHHccEEEECC
Q 002285 452 IHHLDRSLDFHALCALYAITDVALVTS 478 (942)
Q Consensus 452 V~~l~~~v~~~el~aly~~ADv~v~pS 478 (942)
+.-+.+..+-.++.++++.||++|-+-
T Consensus 244 ~~~l~g~~sL~el~ali~~a~l~v~nD 270 (352)
T PRK10422 244 VTALAGKTTFPELGALIDHAQLFIGVD 270 (352)
T ss_pred cccccCCCCHHHHHHHHHhCCEEEecC
Confidence 334578889999999999999999764
No 320
>PRK04128 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Provisional
Probab=35.98 E-value=74 Score=34.20 Aligned_cols=61 Identities=8% Similarity=0.205 Sum_probs=41.7
Q ss_pred ChhhhhhhhcccCCEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcC--CChhhHHH
Q 002285 589 PIKGAVDSYLQSNNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSG--SDRNVLDD 666 (942)
Q Consensus 589 ~~~~~~~~y~~s~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSG--R~~~~L~~ 666 (942)
+..++.+.|.+.-..+++.|.|||+... +...+.++++++..+.+|. ++| |+.+++++
T Consensus 31 dp~~~a~~~~~~~~~l~ivDldga~~g~-------------------~~n~~~i~~i~~~~~~pv~-~gGGIrs~edv~~ 90 (228)
T PRK04128 31 DPVEIALRFSEYVDKIHVVDLDGAFEGK-------------------PKNLDVVKNIIRETGLKVQ-VGGGLRTYESIKD 90 (228)
T ss_pred CHHHHHHHHHHhCCEEEEEECcchhcCC-------------------cchHHHHHHHHhhCCCCEE-EcCCCCCHHHHHH
Confidence 6667777786656678999999999754 1245677777764444444 444 67788888
Q ss_pred hhc
Q 002285 667 NFG 669 (942)
Q Consensus 667 ~~~ 669 (942)
++.
T Consensus 91 l~~ 93 (228)
T PRK04128 91 AYE 93 (228)
T ss_pred HHH
Confidence 765
No 321
>KOG2884 consensus 26S proteasome regulatory complex, subunit RPN10/PSMD4 [Posttranslational modification, protein turnover, chaperones]
Probab=35.57 E-value=3.9e+02 Score=28.61 Aligned_cols=133 Identities=17% Similarity=0.265 Sum_probs=70.4
Q ss_pred ecccccCCHHHHHHHHHHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCC
Q 002285 381 DRLDMIKGIPQKILAFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLD 460 (942)
Q Consensus 381 gRLd~~KGi~~lL~Af~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~ 460 (942)
|.++-.-||.....|+.. +++++-+-++ .+.+|.|-. +-+.++.+++.++...-- ...|++|+..-+
T Consensus 83 g~~~~~~~i~iA~lalkh--Rqnk~~~~ri-VvFvGSpi~-------e~ekeLv~~akrlkk~~V---aidii~FGE~~~ 149 (259)
T KOG2884|consen 83 GKANFMTGIQIAQLALKH--RQNKNQKQRI-VVFVGSPIE-------ESEKELVKLAKRLKKNKV---AIDIINFGEAEN 149 (259)
T ss_pred CcccHHHHHHHHHHHHHh--hcCCCcceEE-EEEecCcch-------hhHHHHHHHHHHHHhcCe---eEEEEEeccccc
Confidence 344455566666666643 3445533222 233444431 123356666666522111 135777765433
Q ss_pred H-HHHHHHHHHc-------cEEEECCCCCCCChhHHHHHhhccCCCceEEEeCCCCcccccCCc----eEEECCCCHHHH
Q 002285 461 F-HALCALYAIT-------DVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSLGAG----AILVNPWNITEV 528 (942)
Q Consensus 461 ~-~el~aly~~A-------Dv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~lg~~----gllVnP~D~~~l 528 (942)
. +.+.++..+. .++.+|+- -...+++.. .|+|.-|-+|++--+|.+ .+=|+|.+-.++
T Consensus 150 ~~e~l~~fida~N~~~~gshlv~Vppg-----~~L~d~l~s-----sPii~ge~g~a~~~~~a~g~~f~fgvdp~~DPEL 219 (259)
T KOG2884|consen 150 NTEKLFEFIDALNGKGDGSHLVSVPPG-----PLLSDALLS-----SPIIQGEDGGAAAGLGANGMDFEFGVDPEDDPEL 219 (259)
T ss_pred cHHHHHHHHHHhcCCCCCceEEEeCCC-----ccHHHHhhc-----CceeccCcccccccccccccccccCCCcccCHHH
Confidence 3 4455555443 35666663 134455554 677777766655555333 345788887899
Q ss_pred HHHHHHHh
Q 002285 529 ASSIGYAL 536 (942)
Q Consensus 529 A~aI~~aL 536 (942)
|.||+--+
T Consensus 220 AlALRlSM 227 (259)
T KOG2884|consen 220 ALALRLSM 227 (259)
T ss_pred HHHHHhhH
Confidence 99987543
No 322
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=35.11 E-value=56 Score=41.46 Aligned_cols=69 Identities=13% Similarity=0.207 Sum_probs=54.4
Q ss_pred hhhhcccCCEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccCc
Q 002285 594 VDSYLQSNNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYNM 673 (942)
Q Consensus 594 ~~~y~~s~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l 673 (942)
++.+.....+.+++-+||+++-... ..-.+-+++.++|++|.+ .|..++++||........+.+.+++
T Consensus 540 ~~~~~~~g~~~v~va~~~~~~g~i~-----------l~d~~r~~a~~~i~~L~~-~gi~~~llTGd~~~~a~~ia~~lgi 607 (741)
T PRK11033 540 INELESAGKTVVLVLRNDDVLGLIA-----------LQDTLRADARQAISELKA-LGIKGVMLTGDNPRAAAAIAGELGI 607 (741)
T ss_pred HHHHHhCCCEEEEEEECCEEEEEEE-----------EecCCchhHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHcCC
Confidence 3456666778889999998775421 123467899999999997 6999999999999999999888776
Q ss_pred e
Q 002285 674 W 674 (942)
Q Consensus 674 ~ 674 (942)
.
T Consensus 608 ~ 608 (741)
T PRK11033 608 D 608 (741)
T ss_pred C
Confidence 3
No 323
>PRK05282 (alpha)-aspartyl dipeptidase; Validated
Probab=34.96 E-value=3.3e+02 Score=29.43 Aligned_cols=112 Identities=18% Similarity=0.176 Sum_probs=66.0
Q ss_pred ceEEEeecccccCCHHHHHHHHHHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEE
Q 002285 375 KVMLGVDRLDMIKGIPQKILAFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHH 454 (942)
Q Consensus 375 ~iIl~VgRLd~~KGi~~lL~Af~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~ 454 (942)
.++++-+|+...-=+.....-+..|+...| ++++| |+-+...+++.+-++..+...+++.+ +..
T Consensus 3 ~ll~s~~~~~~~~~l~~~~~~~~~~~~~~~----~v~fI----PtAs~~~~~~~y~~~~~~af~~lG~~--------v~~ 66 (233)
T PRK05282 3 LLLLSNSTLPGTGYLEHALPLIAELLAGRR----KAVFI----PYAGVTQSWDDYTAKVAEALAPLGIE--------VTG 66 (233)
T ss_pred EEEEecCCCCCCchHHHHHHHHHHHHcCCC----eEEEE----CCCCCCCCHHHHHHHHHHHHHHCCCE--------EEE
Confidence 356677787763334666666777766332 36565 44343334455555555555555432 233
Q ss_pred eCCCCCHHHHHHHHHHccEEEECCC----------CCCCChhHHHHHhhccCCCceEEEeCCCCcc
Q 002285 455 LDRSLDFHALCALYAITDVALVTSL----------RDGMNLVSYEFVACQASKKGVLILSEFAGAA 510 (942)
Q Consensus 455 l~~~v~~~el~aly~~ADv~v~pSl----------~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~ 510 (942)
+.. .++..+.+..||+++++-= .-|+--...|++.. |.+++-..+|+.
T Consensus 67 l~~---~~d~~~~l~~ad~I~v~GGnt~~l~~~l~~~gl~~~l~~~~~~-----G~~~~G~SAGAi 124 (233)
T PRK05282 67 IHR---VADPVAAIENAEAIFVGGGNTFQLLKQLYERGLLAPIREAVKN-----GTPYIGWSAGAN 124 (233)
T ss_pred ecc---chhhHHHHhcCCEEEECCccHHHHHHHHHHCCcHHHHHHHHHC-----CCEEEEECHHHH
Confidence 332 2455677899998888753 23444456677664 778888888864
No 324
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=33.54 E-value=35 Score=33.50 Aligned_cols=40 Identities=20% Similarity=0.349 Sum_probs=34.1
Q ss_pred CCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccCc
Q 002285 633 KLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYNM 673 (942)
Q Consensus 633 ~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l 673 (942)
.+.+.+.+.|++|.+ .+..++|+|+.+...++..+..+++
T Consensus 77 ~~~~~~~~~L~~l~~-~~~~~~i~Sn~~~~~~~~~l~~~~~ 116 (176)
T PF13419_consen 77 QPYPGVRELLERLKA-KGIPLVIVSNGSRERIERVLERLGL 116 (176)
T ss_dssp EESTTHHHHHHHHHH-TTSEEEEEESSEHHHHHHHHHHTTH
T ss_pred chhhhhhhhhhhccc-ccceeEEeecCCccccccccccccc
Confidence 466789999999986 5999999999999988888877643
No 325
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=33.06 E-value=68 Score=32.73 Aligned_cols=39 Identities=15% Similarity=0.085 Sum_probs=32.9
Q ss_pred CChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccCc
Q 002285 634 LHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYNM 673 (942)
Q Consensus 634 ~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l 673 (942)
+.|.+.+.|+.|.+ .|..++|+||.....++.++..+++
T Consensus 81 ~~~g~~e~l~~l~~-~g~~~~IvS~~~~~~~~~~l~~~g~ 119 (201)
T TIGR01491 81 LRDYAEELVRWLKE-KGLKTAIVSGGIMCLAKKVAEKLNP 119 (201)
T ss_pred CCccHHHHHHHHHH-CCCEEEEEeCCcHHHHHHHHHHhCC
Confidence 45678999999987 5999999999999999988877653
No 326
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=33.02 E-value=76 Score=33.00 Aligned_cols=14 Identities=14% Similarity=0.337 Sum_probs=12.9
Q ss_pred EEEEEecCCccCCC
Q 002285 603 RLLILGFNATLTAP 616 (942)
Q Consensus 603 rLi~lD~DGTL~~~ 616 (942)
++++||+||||++.
T Consensus 2 k~viFD~DGTL~d~ 15 (224)
T TIGR02254 2 KTLLFDLDDTILDF 15 (224)
T ss_pred CEEEEcCcCccccc
Confidence 68999999999987
No 327
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=32.87 E-value=32 Score=36.26 Aligned_cols=35 Identities=17% Similarity=0.222 Sum_probs=26.8
Q ss_pred CCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCc
Q 002285 778 VTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 778 vnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
..|..+++.+ + ...+.+++||| +.+|..|.+.++-
T Consensus 147 ~~K~~~l~~~----~------~~~~~~i~iGD-s~~Di~aa~~Ag~ 181 (219)
T PRK09552 147 CCKPSLIRKL----S------DTNDFHIVIGD-SITDLEAAKQADK 181 (219)
T ss_pred CchHHHHHHh----c------cCCCCEEEEeC-CHHHHHHHHHCCc
Confidence 4588777654 3 23567999999 9999999988865
No 328
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=32.19 E-value=42 Score=35.81 Aligned_cols=19 Identities=26% Similarity=0.410 Sum_probs=14.8
Q ss_pred cccCCEEEEEecCCccCCC
Q 002285 598 LQSNNRLLILGFNATLTAP 616 (942)
Q Consensus 598 ~~s~~rLi~lD~DGTL~~~ 616 (942)
+++.+.|++||||-|+++.
T Consensus 9 ~~~~ril~~FDFD~TIid~ 27 (256)
T KOG3120|consen 9 SSSPRILLVFDFDRTIIDQ 27 (256)
T ss_pred ccCCcEEEEEecCceeecC
Confidence 3456788889999998875
No 329
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1
Probab=31.70 E-value=3.9e+02 Score=29.38 Aligned_cols=67 Identities=13% Similarity=0.106 Sum_probs=43.8
Q ss_pred CHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhccCCCceEEEeCCCCccccc------C--CceEEECCC--CHHHHH
Q 002285 460 DFHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSL------G--AGAILVNPW--NITEVA 529 (942)
Q Consensus 460 ~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l------g--~~gllVnP~--D~~~lA 529 (942)
+..++..++..||++|-.+ |++ +..|+++++ .|+|+-...|..|+. . .-|..+++. +.+.++
T Consensus 240 ~~~~~~~~m~~ad~vIs~~---G~~-t~~Ea~~~g----~P~l~ip~~~~~EQ~~~a~~l~~~G~~~~~~~~~~~~~~l~ 311 (318)
T PF13528_consen 240 STPDFAELMAAADLVISKG---GYT-TISEALALG----KPALVIPRPGQDEQEYNARKLEELGLGIVLSQEDLTPERLA 311 (318)
T ss_pred ChHHHHHHHHhCCEEEECC---CHH-HHHHHHHcC----CCEEEEeCCCCchHHHHHHHHHHCCCeEEcccccCCHHHHH
Confidence 3578999999999999765 444 378999983 455555555555553 1 234444544 457777
Q ss_pred HHHHH
Q 002285 530 SSIGY 534 (942)
Q Consensus 530 ~aI~~ 534 (942)
++|.+
T Consensus 312 ~~l~~ 316 (318)
T PF13528_consen 312 EFLER 316 (318)
T ss_pred HHHhc
Confidence 77764
No 330
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=31.59 E-value=76 Score=41.33 Aligned_cols=40 Identities=8% Similarity=0.301 Sum_probs=34.0
Q ss_pred CCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccCc
Q 002285 633 KLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYNM 673 (942)
Q Consensus 633 ~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l 673 (942)
.+-+++.++|++|.+ .|.+|+++||............+++
T Consensus 537 plr~~v~e~I~~l~~-aGI~v~miTGD~~~tA~~ia~~~gi 576 (917)
T TIGR01116 537 PPRPEVADAIEKCRT-AGIRVIMITGDNKETAEAICRRIGI 576 (917)
T ss_pred CCchhHHHHHHHHHH-CCCEEEEecCCCHHHHHHHHHHcCC
Confidence 367899999999986 6999999999999888887776554
No 331
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=31.46 E-value=59 Score=40.64 Aligned_cols=71 Identities=14% Similarity=0.186 Sum_probs=54.1
Q ss_pred hhhhhhhcccCCEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcc
Q 002285 591 KGAVDSYLQSNNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGE 670 (942)
Q Consensus 591 ~~~~~~y~~s~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~ 670 (942)
....+.+.+...+.+++-+|++++-... ..-.+-|++.+++++|.+ .|.+++++||............
T Consensus 415 ~~~~~~~a~~G~r~l~va~~~~~lG~i~-----------l~D~~Rp~a~eaI~~l~~-~Gi~v~miTGD~~~ta~~iA~~ 482 (675)
T TIGR01497 415 DQAVDQVARQGGTPLVVCEDNRIYGVIY-----------LKDIVKGGIKERFAQLRK-MGIKTIMITGDNRLTAAAIAAE 482 (675)
T ss_pred HHHHHHHHhCCCeEEEEEECCEEEEEEE-----------ecccchhHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHH
Confidence 3344556666778888888988775421 122467899999999987 6999999999999999888887
Q ss_pred cCc
Q 002285 671 YNM 673 (942)
Q Consensus 671 ~~l 673 (942)
+++
T Consensus 483 lGI 485 (675)
T TIGR01497 483 AGV 485 (675)
T ss_pred cCC
Confidence 654
No 332
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=30.91 E-value=6.8e+02 Score=28.54 Aligned_cols=70 Identities=16% Similarity=0.185 Sum_probs=45.7
Q ss_pred HHHHHHHHHccEEEECCCCCCCChhHHHHHhhccCCCceEEEeCCCC-c--cccc-------C-CceEEECC--CCHHHH
Q 002285 462 HALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAG-A--AQSL-------G-AGAILVNP--WNITEV 528 (942)
Q Consensus 462 ~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G-~--~~~l-------g-~~gllVnP--~D~~~l 528 (942)
+++..+|+.||++|.-+ =+.+..|+++++ -|.|+--+.. + .++. . ..|..+.. .+.+.+
T Consensus 244 ~~m~~~~~~adlvIsr~----G~~t~~E~~~~g----~P~I~iP~~~~~~~~~Q~~Na~~l~~~g~~~~l~~~~~~~~~l 315 (352)
T PRK12446 244 GELPDILAITDFVISRA----GSNAIFEFLTLQ----KPMLLIPLSKFASRGDQILNAESFERQGYASVLYEEDVTVNSL 315 (352)
T ss_pred hhHHHHHHhCCEEEECC----ChhHHHHHHHcC----CCEEEEcCCCCCCCchHHHHHHHHHHCCCEEEcchhcCCHHHH
Confidence 67899999999988653 257889999992 4555544321 1 1222 1 23444433 357899
Q ss_pred HHHHHHHhCCC
Q 002285 529 ASSIGYALNMP 539 (942)
Q Consensus 529 A~aI~~aL~m~ 539 (942)
+++|..+++++
T Consensus 316 ~~~l~~ll~~~ 326 (352)
T PRK12446 316 IKHVEELSHNN 326 (352)
T ss_pred HHHHHHHHcCH
Confidence 99999998754
No 333
>KOG4549 consensus Magnesium-dependent phosphatase [General function prediction only]
Probab=30.61 E-value=77 Score=30.91 Aligned_cols=64 Identities=14% Similarity=0.083 Sum_probs=44.9
Q ss_pred CEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhH-HHhhccc
Q 002285 602 NRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVL-DDNFGEY 671 (942)
Q Consensus 602 ~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L-~~~~~~~ 671 (942)
.+++-+|+|+|+-|...+++.- ......-+.....|..|.+ .|.+++++|--.-.++ .+.+..+
T Consensus 18 P~~vdthl~~pfkP~k~~~g~~-----g~e~~fY~Di~rIL~dLk~-~GVtl~~ASRt~ap~iA~q~L~~f 82 (144)
T KOG4549|consen 18 PRLVDTHLDYPFKPFKCECGSK-----GEEMIFYDDIRRILVDLKK-LGVTLIHASRTMAPQIASQGLETF 82 (144)
T ss_pred eEEEEecccccccccccCcccC-----cceeeeccchhHHHHHHHh-cCcEEEEecCCCCHHHHHHHHHHh
Confidence 3678899999999987766421 1334567788999999997 6999999986544443 3444433
No 334
>PRK05632 phosphate acetyltransferase; Reviewed
Probab=30.41 E-value=3.1e+02 Score=34.54 Aligned_cols=194 Identities=11% Similarity=0.040 Sum_probs=112.5
Q ss_pred CCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhccCCCceEEEeCCCCccccc-----C----CceEEECCCCHH
Q 002285 456 DRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSL-----G----AGAILVNPWNIT 526 (942)
Q Consensus 456 ~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~~G~~~~l-----g----~~gllVnP~D~~ 526 (942)
-+.++.+.+...++.-+++++|.-|+-.=+.++|+-... .+-..+|++...-..+.+ + .-.++.-|+|.-
T Consensus 231 vgAm~~~~~~~~l~~~~lVIt~gdR~Di~l~al~~~~~~-~~~a~lIlTgg~~~~~~v~~l~~~a~~~~ipVl~t~~dT~ 309 (684)
T PRK05632 231 VCARSIPNMLEHLKPGSLVVTPGDRSDVILAALLAAMNG-PPIAGLLLTGGYEPDPRIAKLCEGAFETGLPVLSVDTNTY 309 (684)
T ss_pred EEecchHHHHHhccCCcEEEeCCChHHHHHHHHHhcccC-CCceEEEEcCCCCCCHHHHHHHhhcccCCCCEEEecCCHH
Confidence 355677788888888788888787776666677762110 001236666543322222 1 124666799999
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHhHHHHhc-CHHHHHHHHHHHHHHhHHHhhhccccCCCCCChhhhhhhhcccCCEEE
Q 002285 527 EVASSIGYALNMPADEREKRHLHNFMHVTTH-TSQEWAATFVSELNDTIVEAQIRTRQVPPSLPIKGAVDSYLQSNNRLL 605 (942)
Q Consensus 527 ~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~-~~~~W~~~fl~~L~~~~~~~~~~~~~~~~~l~~~~~~~~y~~s~~rLi 605 (942)
+.|..|.++...-..+-.++...+...+.+| |.++|.+. +.. . ..+...++|..-...+++.-+..++|++
T Consensus 310 ~ta~~i~~~~~~i~~~d~~ki~~~~~~~~~~vD~~~l~~~-l~~----~---~~~~~~~~p~~~~~~l~~~a~~~~~~i~ 381 (684)
T PRK05632 310 QTALRLQSFNGEVPVDDHERIETVLELVASHVDTDELLER-LTA----T---SERSRRLSPPAFRYQLTERARAAKKRIV 381 (684)
T ss_pred HHHHHHHHhcCCCCCCCHHHHHHHHHHHHHhCCHHHHHHH-hcc----C---CCCCCCcCHHHHHHHHHHHHhcCCCEEE
Confidence 9999999875422112234456667777777 87777775 221 0 0122334454445667777776666766
Q ss_pred EEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccCceEEeecceEEEe
Q 002285 606 ILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYNMWLAAENGMFLRL 685 (942)
Q Consensus 606 ~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l~liaehG~~ir~ 685 (942)
|-. | -.++++++...+.+ .|..-.|.-|+. +.+++.+...++.+ . .+.+|.+
T Consensus 382 ~~e--~----------------------~d~~~l~Aa~~~~~-~g~~~~iLvG~~-~~I~~~~~~~~~~l-~-~~~~Ii~ 433 (684)
T PRK05632 382 LPE--G----------------------DEPRTLKAAAICLE-RGIADCVLLGNP-EEIRRVAAAQGVDL-P-AGIEIID 433 (684)
T ss_pred EeC--C----------------------CCHHHHHHHHHHHH-cCCceEEEECCH-HHHHHHHHHcCCCc-c-CCcEEEC
Confidence 522 1 14667787777666 466666666875 46666666544322 1 3566654
Q ss_pred C
Q 002285 686 T 686 (942)
Q Consensus 686 ~ 686 (942)
.
T Consensus 434 ~ 434 (684)
T PRK05632 434 P 434 (684)
T ss_pred C
Confidence 3
No 335
>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional
Probab=30.23 E-value=1e+03 Score=28.65 Aligned_cols=75 Identities=9% Similarity=0.070 Sum_probs=46.8
Q ss_pred eCCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhccCCCce-EEEeCCCC----ccccc--CCceEEECC--CCH
Q 002285 455 LDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGV-LILSEFAG----AAQSL--GAGAILVNP--WNI 525 (942)
Q Consensus 455 l~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~-lIlSe~~G----~~~~l--g~~gllVnP--~D~ 525 (942)
+...+|+.++.+- ..+++||- .-|+| +..||+.+ |+ +|+--..+ .+..+ -..|+.+++ .+.
T Consensus 350 i~~w~Pq~~lL~h-p~v~~fIt---HGG~~-s~~Eal~~-----GvP~v~iP~~~DQ~~Na~rv~~~G~G~~l~~~~~t~ 419 (507)
T PHA03392 350 TQKWFPQRAVLKH-KNVKAFVT---QGGVQ-STDEAIDA-----LVPMVGLPMMGDQFYNTNKYVELGIGRALDTVTVSA 419 (507)
T ss_pred EecCCCHHHHhcC-CCCCEEEe---cCCcc-cHHHHHHc-----CCCEEECCCCccHHHHHHHHHHcCcEEEeccCCcCH
Confidence 4567887765432 56788873 35654 67899998 54 44333222 11112 124677765 467
Q ss_pred HHHHHHHHHHhCCC
Q 002285 526 TEVASSIGYALNMP 539 (942)
Q Consensus 526 ~~lA~aI~~aL~m~ 539 (942)
+++.+||.++|+.+
T Consensus 420 ~~l~~ai~~vl~~~ 433 (507)
T PHA03392 420 AQLVLAIVDVIENP 433 (507)
T ss_pred HHHHHHHHHHhCCH
Confidence 89999999999864
No 336
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=29.89 E-value=66 Score=33.32 Aligned_cols=40 Identities=13% Similarity=0.173 Sum_probs=33.5
Q ss_pred CCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccCc
Q 002285 633 KLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYNM 673 (942)
Q Consensus 633 ~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l 673 (942)
.+.|.+.+.|+.|.+ .|..++|+||.+...+...+..+++
T Consensus 75 ~~~~g~~~~L~~L~~-~g~~~~i~Sn~~~~~~~~~l~~~~l 114 (205)
T TIGR01454 75 EVFPGVPELLAELRA-DGVGTAIATGKSGPRARSLLEALGL 114 (205)
T ss_pred ccCCCHHHHHHHHHH-CCCeEEEEeCCchHHHHHHHHHcCC
Confidence 456789999999987 5899999999999988887776543
No 337
>COG4996 Predicted phosphatase [General function prediction only]
Probab=29.79 E-value=67 Score=31.52 Aligned_cols=15 Identities=20% Similarity=0.237 Sum_probs=13.0
Q ss_pred EEEEEecCCccCCCC
Q 002285 603 RLLILGFNATLTAPV 617 (942)
Q Consensus 603 rLi~lD~DGTL~~~~ 617 (942)
++|+||.||||.+..
T Consensus 1 ~~i~~d~d~t~wdhh 15 (164)
T COG4996 1 RAIVFDADKTLWDHH 15 (164)
T ss_pred CcEEEeCCCcccccc
Confidence 479999999999864
No 338
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=29.70 E-value=38 Score=35.63 Aligned_cols=38 Identities=0% Similarity=-0.259 Sum_probs=32.7
Q ss_pred CHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCc
Q 002285 779 TKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 779 nKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
-+...++.+++.++ .+++.+++||| ..+|.++-+.++-
T Consensus 149 p~~~~~~~~~~~~~------~~~~~~~~igD-s~~Di~aA~~aG~ 186 (222)
T PRK10826 149 PHPEVYLNCAAKLG------VDPLTCVALED-SFNGMIAAKAARM 186 (222)
T ss_pred CCHHHHHHHHHHcC------CCHHHeEEEcC-ChhhHHHHHHcCC
Confidence 45568899999988 56899999999 9999999999875
No 339
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=29.64 E-value=65 Score=33.34 Aligned_cols=40 Identities=8% Similarity=0.096 Sum_probs=33.6
Q ss_pred CCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccCc
Q 002285 633 KLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYNM 673 (942)
Q Consensus 633 ~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l 673 (942)
.+-|.+.++|+.|.+ .|.+++|+|+.+...++.++..+++
T Consensus 85 ~~~~g~~~~L~~l~~-~g~~~~i~S~~~~~~~~~~l~~~~l 124 (213)
T TIGR01449 85 SVFPGVEATLGALRA-KGLRLGLVTNKPTPLARPLLELLGL 124 (213)
T ss_pred ccCCCHHHHHHHHHH-CCCeEEEEeCCCHHHHHHHHHHcCc
Confidence 456779999999987 5899999999999999888887653
No 340
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=28.67 E-value=64 Score=35.96 Aligned_cols=53 Identities=13% Similarity=0.197 Sum_probs=37.5
Q ss_pred EEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhccc
Q 002285 603 RLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEY 671 (942)
Q Consensus 603 rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~ 671 (942)
-.|+||.||.|..- + .+-|.+.++|..|.+. |..++++|--+....+++++..
T Consensus 23 DtfifDcDGVlW~g-~--------------~~ipGs~e~l~~L~~~-gK~i~fvTNNStksr~~y~kK~ 75 (306)
T KOG2882|consen 23 DTFIFDCDGVLWLG-E--------------KPIPGSPEALNLLKSL-GKQIIFVTNNSTKSREQYMKKF 75 (306)
T ss_pred CEEEEcCCcceeec-C--------------CCCCChHHHHHHHHHc-CCcEEEEeCCCcchHHHHHHHH
Confidence 35899999999873 2 2345677777777764 6788888877776666665543
No 341
>PF15024 Glyco_transf_18: Glycosyltransferase family 18
Probab=28.65 E-value=1.8e+02 Score=35.35 Aligned_cols=78 Identities=22% Similarity=0.169 Sum_probs=55.6
Q ss_pred CCCCCHHHHHHHHHHccEEE-ECCCCCCCChhHHHHHhhccCCCceE-------------------------EEeCCCCc
Q 002285 456 DRSLDFHALCALYAITDVAL-VTSLRDGMNLVSYEFVACQASKKGVL-------------------------ILSEFAGA 509 (942)
Q Consensus 456 ~~~v~~~el~aly~~ADv~v-~pSl~EG~~Lv~lEamA~~~~~~G~l-------------------------IlSe~~G~ 509 (942)
+|.++..++..+++.|-||| +-.-+|| =.++||||.+ .+- +.|....+
T Consensus 327 HG~l~~~ef~~lL~~akvfiGlGfP~Eg--PaPlEAia~G----~vFlNp~~~pp~s~~n~~ff~~KPt~r~~~SQhPY~ 400 (559)
T PF15024_consen 327 HGILSGDEFQQLLRKAKVFIGLGFPYEG--PAPLEAIANG----CVFLNPRFNPPHSRLNTEFFKGKPTLREWTSQHPYA 400 (559)
T ss_pred cCcCCHHHHHHHHHhhhEeeecCCCCCC--CChHHHHHcC----CccccccCCCCCcccccccccCCCCcceeccCChHH
Confidence 36678999999999999999 4444674 4699999974 121 22222222
Q ss_pred ccccC-CceEEECCCCHHHHHHHHHHHhCCC
Q 002285 510 AQSLG-AGAILVNPWNITEVASSIGYALNMP 539 (942)
Q Consensus 510 ~~~lg-~~gllVnP~D~~~lA~aI~~aL~m~ 539 (942)
...+| ..-+.|+-.|.+++-+||+++|.++
T Consensus 401 e~~iG~PhVytVd~~n~~~v~~Avk~il~~~ 431 (559)
T PF15024_consen 401 EEFIGEPHVYTVDINNSTEVEAAVKAILATP 431 (559)
T ss_pred HhhCCCCeEEEEcCCCHHHHHHHHHHHHhcC
Confidence 22234 3567899999999999999999875
No 342
>PRK10840 transcriptional regulator RcsB; Provisional
Probab=28.01 E-value=2.8e+02 Score=28.67 Aligned_cols=77 Identities=12% Similarity=0.108 Sum_probs=49.1
Q ss_pred HHHHHHHHH--HccEEEECCCCCC----CChhHHHHHhhccCCCceEEEeCCCCccc---cc--CCceEEECCCCHHHHH
Q 002285 461 FHALCALYA--ITDVALVTSLRDG----MNLVSYEFVACQASKKGVLILSEFAGAAQ---SL--GAGAILVNPWNITEVA 529 (942)
Q Consensus 461 ~~el~aly~--~ADv~v~pSl~EG----~~Lv~lEamA~~~~~~G~lIlSe~~G~~~---~l--g~~gllVnP~D~~~lA 529 (942)
.++....+. ..|++++-....| -|+..++.+........++++|....... .+ |..|++..|.+.+++.
T Consensus 38 ~~~~~~~~~~~~~DlvllD~~l~~~~~~~g~~~~~~l~~~~~~~~iIvls~~~~~~~~~~a~~~Ga~~yl~K~~~~~~l~ 117 (216)
T PRK10840 38 STALINNLPKLDAHVLITDLSMPGDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLP 117 (216)
T ss_pred HHHHHHHHHhCCCCEEEEeCcCCCCCCCCHHHHHHHHHHHCCCCcEEEEEecCCHHHHHHHHHCCCeEEEECCCCHHHHH
Confidence 445555544 3688887644333 46666666643222223477776654221 12 7889999999999999
Q ss_pred HHHHHHhC
Q 002285 530 SSIGYALN 537 (942)
Q Consensus 530 ~aI~~aL~ 537 (942)
++|..++.
T Consensus 118 ~ai~~v~~ 125 (216)
T PRK10840 118 KALAALQK 125 (216)
T ss_pred HHHHHHHC
Confidence 99998875
No 343
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=27.80 E-value=79 Score=31.56 Aligned_cols=39 Identities=18% Similarity=0.238 Sum_probs=33.0
Q ss_pred CChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccCc
Q 002285 634 LHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYNM 673 (942)
Q Consensus 634 ~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l 673 (942)
+.+.+.+.|+.|.+ .|..++|+||.....++.++..+++
T Consensus 74 ~~~g~~~~l~~l~~-~g~~~~ivS~~~~~~i~~~~~~~g~ 112 (177)
T TIGR01488 74 LRPGARELISWLKE-RGIDTVIVSGGFDFFVEPVAEKLGI 112 (177)
T ss_pred cCcCHHHHHHHHHH-CCCEEEEECCCcHHHHHHHHHHcCC
Confidence 45778899999886 5899999999999999988877654
No 344
>PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=26.60 E-value=3.2e+02 Score=32.54 Aligned_cols=73 Identities=15% Similarity=0.070 Sum_probs=44.3
Q ss_pred CCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhccCCCceEEE-eCC----CCccccc--C-CceEEE-CCCCHHH
Q 002285 457 RSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLIL-SEF----AGAAQSL--G-AGAILV-NPWNITE 527 (942)
Q Consensus 457 ~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIl-Se~----~G~~~~l--g-~~gllV-nP~D~~~ 527 (942)
+.+++.++.+. ....+||- .-|+| +.+|++++ |++++ --. -..+..+ . .-|+.+ ...+.++
T Consensus 330 ~w~PQ~~iL~h-~~v~~fvt---H~G~n-S~~Ea~~~-----GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~~ 399 (451)
T PLN02410 330 KWAPQKEVLSH-PAVGGFWS---HCGWN-STLESIGE-----GVPMICKPFSSDQKVNARYLECVWKIGIQVEGDLDRGA 399 (451)
T ss_pred ccCCHHHHhCC-CccCeeee---cCchh-HHHHHHHc-----CCCEEeccccccCHHHHHHHHHHhCeeEEeCCcccHHH
Confidence 57777775543 33444553 46787 67899998 65333 222 1222211 1 345555 3457889
Q ss_pred HHHHHHHHhCCC
Q 002285 528 VASSIGYALNMP 539 (942)
Q Consensus 528 lA~aI~~aL~m~ 539 (942)
++++|++++..+
T Consensus 400 v~~av~~lm~~~ 411 (451)
T PLN02410 400 VERAVKRLMVEE 411 (451)
T ss_pred HHHHHHHHHcCC
Confidence 999999999765
No 345
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=26.57 E-value=84 Score=33.02 Aligned_cols=39 Identities=18% Similarity=0.216 Sum_probs=33.4
Q ss_pred CCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccC
Q 002285 633 KLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYN 672 (942)
Q Consensus 633 ~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~ 672 (942)
.+-|.+.+.|+.|.+ .|.+++|+||.....++..++.++
T Consensus 92 ~~~~g~~~~l~~l~~-~g~~~~i~S~~~~~~~~~~l~~~~ 130 (222)
T PRK10826 92 PLLPGVREALALCKA-QGLKIGLASASPLHMLEAVLTMFD 130 (222)
T ss_pred CCCCCHHHHHHHHHH-CCCeEEEEeCCcHHHHHHHHHhCc
Confidence 456889999999987 599999999999998888877654
No 346
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=26.32 E-value=42 Score=44.32 Aligned_cols=35 Identities=6% Similarity=0.096 Sum_probs=0.0
Q ss_pred CCEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeE
Q 002285 601 NNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTV 653 (942)
Q Consensus 601 ~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V 653 (942)
+.++++||+||||++. .+...+++.++.++-|..+
T Consensus 74 ~ikaVIFDlDGTLiDS------------------~~~~~~a~~~~~~~~G~~i 108 (1057)
T PLN02919 74 KVSAVLFDMDGVLCNS------------------EEPSRRAAVDVFAEMGVEV 108 (1057)
T ss_pred CCCEEEECCCCCeEeC------------------hHHHHHHHHHHHHHcCCCC
No 347
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=25.56 E-value=82 Score=32.82 Aligned_cols=39 Identities=13% Similarity=0.066 Sum_probs=32.9
Q ss_pred CCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccC
Q 002285 633 KLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYN 672 (942)
Q Consensus 633 ~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~ 672 (942)
.+-|.+.++|+.|.+ .|..++|+||.....++..+..++
T Consensus 82 ~~~~g~~~~l~~L~~-~g~~~~i~S~~~~~~~~~~l~~~g 120 (214)
T PRK13288 82 TEYETVYETLKTLKK-QGYKLGIVTTKMRDTVEMGLKLTG 120 (214)
T ss_pred ccCcCHHHHHHHHHH-CCCeEEEEeCCCHHHHHHHHHHcC
Confidence 356789999999987 589999999999999888877654
No 348
>PLN00414 glycosyltransferase family protein
Probab=25.34 E-value=2.9e+02 Score=32.85 Aligned_cols=108 Identities=9% Similarity=0.119 Sum_probs=61.6
Q ss_pred CCCCCHHHHHHHHHHccEEEECCCCCCCChhHHHHHhhccCCCceEEEe-----CCCCccccc--C-CceEEECC-----
Q 002285 456 DRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQASKKGVLILS-----EFAGAAQSL--G-AGAILVNP----- 522 (942)
Q Consensus 456 ~~~v~~~el~aly~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlS-----e~~G~~~~l--g-~~gllVnP----- 522 (942)
.+.+++.++.+- ...++||- .-|+| ..+|++++ |++++. |..-.+..+ . .-|+.+..
T Consensus 317 ~~w~PQ~~vL~h-~~v~~fvt---H~G~n-S~~Ea~~~-----GvP~l~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~ 386 (446)
T PLN00414 317 EGWVEQPLILSH-PSVGCFVN---HCGFG-SMWESLVS-----DCQIVFIPQLADQVLITRLLTEELEVSVKVQREDSGW 386 (446)
T ss_pred eccCCHHHHhcC-CccceEEe---cCchh-HHHHHHHc-----CCCEEecCcccchHHHHHHHHHHhCeEEEeccccCCc
Confidence 456777765543 33355653 45776 67899998 654433 222222222 1 34566642
Q ss_pred CCHHHHHHHHHHHhCCCHHHH---HHHHHHHhHHHHhcCH-HHHHHHHHHHHHHh
Q 002285 523 WNITEVASSIGYALNMPADER---EKRHLHNFMHVTTHTS-QEWAATFVSELNDT 573 (942)
Q Consensus 523 ~D~~~lA~aI~~aL~m~~~er---~~r~~~~~~~v~~~~~-~~W~~~fl~~L~~~ 573 (942)
-+.+++++++++++..+.+++ +++.++.++.+..-.. ..+.++|++.+.+.
T Consensus 387 ~~~~~i~~~v~~~m~~~~e~g~~~r~~a~~~~~~~~~~gg~ss~l~~~v~~~~~~ 441 (446)
T PLN00414 387 FSKESLRDTVKSVMDKDSEIGNLVKRNHKKLKETLVSPGLLSGYADKFVEALENE 441 (446)
T ss_pred cCHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHh
Confidence 478999999999997653322 2333334444433333 56678888877543
No 349
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=24.99 E-value=1.1e+02 Score=32.17 Aligned_cols=44 Identities=25% Similarity=0.380 Sum_probs=36.1
Q ss_pred CCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccCceE
Q 002285 631 EPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYNMWL 675 (942)
Q Consensus 631 ~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l~l 675 (942)
..+++|.+++...+|.+ .|.+|+++||-=+..+...-+.+++.+
T Consensus 86 k~~lT~Gi~eLv~~L~~-~~~~v~liSGGF~~~i~~Va~~Lgi~~ 129 (227)
T KOG1615|consen 86 KPTLTPGIRELVSRLHA-RGTQVYLISGGFRQLIEPVAEQLGIPK 129 (227)
T ss_pred CCccCCCHHHHHHHHHH-cCCeEEEEcCChHHHHHHHHHHhCCcH
Confidence 34678999999999998 699999999988887777777666554
No 350
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=24.74 E-value=53 Score=34.38 Aligned_cols=45 Identities=11% Similarity=0.048 Sum_probs=33.8
Q ss_pred EEEEEECCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCc
Q 002285 770 SVEVRAVGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 770 ~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
.-|-...+--|+.+|..+.+. .+...++.+|| +.||.+|..-+..
T Consensus 150 ~~~ptsdsggKa~~i~~lrk~--------~~~~~~~mvGD-GatDlea~~pa~a 194 (227)
T KOG1615|consen 150 TNEPTSDSGGKAEVIALLRKN--------YNYKTIVMVGD-GATDLEAMPPADA 194 (227)
T ss_pred cCCccccCCccHHHHHHHHhC--------CChheeEEecC-CccccccCCchhh
Confidence 344455667899999988773 35678899999 9999988755433
No 351
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=24.66 E-value=1.2e+03 Score=27.29 Aligned_cols=78 Identities=18% Similarity=0.190 Sum_probs=38.7
Q ss_pred EEEEEEEcCCC--CChhHHHHHHHHHHHHHHhhccccCC-cCcccEEEeC-CCCCHHHHHHHHHHccEEEECCCCCCCCh
Q 002285 410 VVLIQIAVPTR--TDVPEYQKLTSQVHEIVGRINGRYGT-LTTVPIHHLD-RSLDFHALCALYAITDVALVTSLRDGMNL 485 (942)
Q Consensus 410 vvLvqi~~psr--gd~~~y~~l~~~l~~lv~~IN~~~~~-~~~~pV~~l~-~~v~~~el~aly~~ADv~v~pSl~EG~~L 485 (942)
+.+.+.+.|-. |.+...++| .++.+++.+.|...-. .-|.++++.+ .+++..-+..-+ +--++.++|-.-+|||
T Consensus 159 vkl~iLCnPHNP~Grvwt~eeL-~~i~elc~kh~v~VISDEIHaDlv~~g~~h~~~a~ls~~~-a~~~it~~saSKtFNl 236 (388)
T COG1168 159 VKLFILCNPHNPTGRVWTKEEL-RKIAELCLRHGVRVISDEIHADLVLGGHKHIPFASLSERF-ADNSITLTSASKTFNL 236 (388)
T ss_pred ccEEEEeCCCCCCCccccHHHH-HHHHHHHHHcCCEEEeecccccccccCCCccchhhcChhh-hcceEEEeeccccccc
Confidence 55666676643 444443333 4566666665543211 1234555443 344444444433 3344555666667776
Q ss_pred hHHH
Q 002285 486 VSYE 489 (942)
Q Consensus 486 v~lE 489 (942)
.-+.
T Consensus 237 aGL~ 240 (388)
T COG1168 237 AGLK 240 (388)
T ss_pred hhhh
Confidence 6554
No 352
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=24.53 E-value=55 Score=33.95 Aligned_cols=39 Identities=18% Similarity=0.210 Sum_probs=26.1
Q ss_pred CCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhccc
Q 002285 632 PKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEY 671 (942)
Q Consensus 632 ~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~ 671 (942)
..+.|..++-.+...+ .++.|+|+||-.-..+..+|..+
T Consensus 72 i~Idp~fKef~e~ike-~di~fiVvSsGm~~fI~~lfe~i 110 (220)
T COG4359 72 IKIDPGFKEFVEWIKE-HDIPFIVVSSGMDPFIYPLFEGI 110 (220)
T ss_pred cccCccHHHHHHHHHH-cCCCEEEEeCCCchHHHHHHHhh
Confidence 3456666666666555 57777777777777777766654
No 353
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=24.52 E-value=75 Score=33.18 Aligned_cols=39 Identities=18% Similarity=0.274 Sum_probs=33.2
Q ss_pred CCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccC
Q 002285 633 KLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYN 672 (942)
Q Consensus 633 ~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~ 672 (942)
.+.+.+.+.|..|.+ .|..++|+||.....+...+..++
T Consensus 87 ~l~~G~~~~L~~L~~-~g~~~~ivT~~~~~~~~~~l~~~~ 125 (220)
T TIGR03351 87 VALPGAEEAFRSLRS-SGIKVALTTGFDRDTAERLLEKLG 125 (220)
T ss_pred ccCCCHHHHHHHHHH-CCCEEEEEeCCchHHHHHHHHHhh
Confidence 456789999999987 599999999999999988877654
No 354
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=24.14 E-value=88 Score=32.22 Aligned_cols=36 Identities=17% Similarity=0.174 Sum_probs=29.7
Q ss_pred hHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccCc
Q 002285 637 DLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYNM 673 (942)
Q Consensus 637 ~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l 673 (942)
...++|+.|.+ .|..++|+||.+...++..+..+++
T Consensus 110 ~~~~~L~~l~~-~g~~~~i~T~~~~~~~~~~l~~~gl 145 (197)
T TIGR01548 110 TPKGLLRELHR-APKGMAVVTGRPRKDAAKFLTTHGL 145 (197)
T ss_pred CHHHHHHHHHH-cCCcEEEECCCCHHHHHHHHHHcCc
Confidence 34788888876 5899999999999999988877653
No 355
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=23.97 E-value=90 Score=33.00 Aligned_cols=38 Identities=21% Similarity=0.215 Sum_probs=33.4
Q ss_pred CChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccC
Q 002285 634 LHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYN 672 (942)
Q Consensus 634 ~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~ 672 (942)
+-|.+.++|..|.+ .|..++|+|+++...++..+..++
T Consensus 90 ~~~gv~e~L~~L~~-~g~~l~i~T~k~~~~~~~~l~~~g 127 (220)
T COG0546 90 LFPGVKELLAALKS-AGYKLGIVTNKPERELDILLKALG 127 (220)
T ss_pred cCCCHHHHHHHHHh-CCCeEEEEeCCcHHHHHHHHHHhC
Confidence 45678999999997 699999999999999999998764
No 356
>PRK11590 hypothetical protein; Provisional
Probab=23.36 E-value=1.2e+02 Score=31.72 Aligned_cols=43 Identities=21% Similarity=0.297 Sum_probs=32.5
Q ss_pred ChhHHHHH-HHhhhCCCCeEEEEcCCChhhHHHhhcccC----ceEEee
Q 002285 635 HPDLKEPL-KRLCDDPMTTVVVLSGSDRNVLDDNFGEYN----MWLAAE 678 (942)
Q Consensus 635 ~~~~~~aL-~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~----l~liae 678 (942)
-|.+.+.| +.|.+ .|..++|+|+.+...++.++..++ ..++|.
T Consensus 97 ~pga~e~L~~~l~~-~G~~l~IvSas~~~~~~~il~~l~~~~~~~~i~t 144 (211)
T PRK11590 97 FPVVQERLTTYLLS-SDADVWLITGSPQPLVEQVYFDTPWLPRVNLIAS 144 (211)
T ss_pred CccHHHHHHHHHHh-CCCEEEEEeCCcHHHHHHHHHHccccccCceEEE
Confidence 45688999 45664 588999999999999998877654 355554
No 357
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=23.17 E-value=80 Score=33.96 Aligned_cols=38 Identities=18% Similarity=0.114 Sum_probs=32.1
Q ss_pred CCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhccc
Q 002285 633 KLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEY 671 (942)
Q Consensus 633 ~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~ 671 (942)
.+-|.+.+.|+.|.+ .|..++|+||.+...++..+..+
T Consensus 99 ~~~pg~~e~L~~L~~-~g~~l~IvT~~~~~~~~~~l~~~ 136 (253)
T TIGR01422 99 SPIPGVIEVIAYLRA-RGIKIGSTTGYTREMMDVVAPEA 136 (253)
T ss_pred ccCCCHHHHHHHHHH-CCCeEEEECCCcHHHHHHHHHHH
Confidence 456789999999987 58999999999999988877654
No 358
>PRK13587 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Provisional
Probab=23.15 E-value=1.5e+02 Score=31.90 Aligned_cols=60 Identities=13% Similarity=0.162 Sum_probs=0.0
Q ss_pred CChhhhhhhhcccC-CEEEEEec--CCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcC--CChh
Q 002285 588 LPIKGAVDSYLQSN-NRLLILGF--NATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSG--SDRN 662 (942)
Q Consensus 588 l~~~~~~~~y~~s~-~rLi~lD~--DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSG--R~~~ 662 (942)
.+..++++.+.... ..+|++|+ |||+... ..+.++++++..+.. ++++| |+.+
T Consensus 148 ~~~~~~~~~~~~~g~~~ii~tdi~~dGt~~G~---------------------~~~li~~l~~~~~ip-vi~~GGi~s~e 205 (234)
T PRK13587 148 LNLFSFVRQLSDIPLGGIIYTDIAKDGKMSGP---------------------NFELTGQLVKATTIP-VIASGGIRHQQ 205 (234)
T ss_pred CCHHHHHHHHHHcCCCEEEEecccCcCCCCcc---------------------CHHHHHHHHHhCCCC-EEEeCCCCCHH
Q ss_pred hHHHhhc
Q 002285 663 VLDDNFG 669 (942)
Q Consensus 663 ~L~~~~~ 669 (942)
++.+++.
T Consensus 206 di~~l~~ 212 (234)
T PRK13587 206 DIQRLAS 212 (234)
T ss_pred HHHHHHH
No 359
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=22.79 E-value=96 Score=33.66 Aligned_cols=68 Identities=16% Similarity=0.229 Sum_probs=47.2
Q ss_pred cCCEEEEEecCCccCCCCCccCCCCCccc---------------cCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhh-
Q 002285 600 SNNRLLILGFNATLTAPVDFLGRRGGQIR---------------EMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNV- 663 (942)
Q Consensus 600 s~~rLi~lD~DGTL~~~~~~P~~~~~~~~---------------~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~- 663 (942)
-+.+.+++|+|-|+++..+.- +.++. .-.+++-|...+-|.=.-+ .|..|+.+|-|+.+.
T Consensus 77 ~K~~aVvlDlDETvLdNs~Yq---gy~v~nnk~f~pe~Wd~wV~a~~sk~vpGA~eFl~Yvn~-~Gg~ifyiSNR~~~~~ 152 (274)
T COG2503 77 GKKKAVVLDLDETVLDNSAYQ---GYQVLNNKGFTPETWDKWVQAKKSKAVPGAVEFLNYVNS-NGGKIFYISNRDQENE 152 (274)
T ss_pred CCCceEEEecchHhhcCcccc---chhhhcCCCCCccchHHHHhhcccccCccHHHHHHHHHh-cCcEEEEEeccchhcc
Confidence 456699999999999874332 22221 1344567888898888665 699999999999877
Q ss_pred HHHhhccc
Q 002285 664 LDDNFGEY 671 (942)
Q Consensus 664 L~~~~~~~ 671 (942)
.+.-...+
T Consensus 153 ~~~T~~nL 160 (274)
T COG2503 153 KDGTIENL 160 (274)
T ss_pred cchhHHHH
Confidence 54444433
No 360
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=22.58 E-value=93 Score=29.67 Aligned_cols=38 Identities=11% Similarity=-0.039 Sum_probs=29.6
Q ss_pred CHHHHHHHHHHHh-cccCCCCCCCceEEEEeCCC-CCCHHHHHhcCc
Q 002285 779 TKGAAIDRILGEI-VRHKGLKTPIDYVLCIGHFL-QKDEDIYTFFEP 823 (942)
Q Consensus 779 nKG~Av~~Ll~~l-~~~~~~~~~~d~vl~iGD~d-~nDEdMF~~~~~ 823 (942)
.|..+++.+++.+ + .+++.+++||| . .+|..+=+.++-
T Consensus 86 P~~~~~~~~~~~~~~------~~~~~~v~IGD-~~~~Di~~A~~~Gi 125 (132)
T TIGR01662 86 PKPGMFLEALKRFNE------IDPEESVYVGD-QDLTDLQAAKRAGL 125 (132)
T ss_pred CChHHHHHHHHHcCC------CChhheEEEcC-CCcccHHHHHHCCC
Confidence 3678889999998 4 46789999999 5 788777666653
No 361
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=22.46 E-value=1.1e+02 Score=31.95 Aligned_cols=40 Identities=18% Similarity=0.244 Sum_probs=33.4
Q ss_pred CCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccCc
Q 002285 633 KLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYNM 673 (942)
Q Consensus 633 ~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l 673 (942)
.+-|.+.++|+.|.+ .|..++|+||.....++.++..+++
T Consensus 93 ~~~~g~~~~l~~l~~-~g~~~~i~S~~~~~~~~~~l~~~~l 132 (226)
T PRK13222 93 RLYPGVKETLAALKA-AGYPLAVVTNKPTPFVAPLLEALGI 132 (226)
T ss_pred ccCCCHHHHHHHHHH-CCCeEEEEeCCCHHHHHHHHHHcCC
Confidence 456789999999987 5899999999999988888876543
No 362
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=22.38 E-value=95 Score=32.78 Aligned_cols=38 Identities=18% Similarity=0.335 Sum_probs=27.4
Q ss_pred CCCCHHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCc
Q 002285 776 VGVTKGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 776 ~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
.|-.|-..++..+ + .+.+...+.|| +.+|.+|++.++.
T Consensus 159 ~g~~Kv~rl~~~~---~------~~~~~~~aYsD-S~~D~pmL~~a~~ 196 (210)
T TIGR01545 159 LGHEKVAQLEQKI---G------SPLKLYSGYSD-SKQDNPLLAFCEH 196 (210)
T ss_pred CChHHHHHHHHHh---C------CChhheEEecC-CcccHHHHHhCCC
Confidence 4556666666555 3 12445689999 9999999999986
No 363
>PLN02645 phosphoglycolate phosphatase
Probab=22.26 E-value=1.9e+02 Score=32.53 Aligned_cols=35 Identities=9% Similarity=-0.085 Sum_probs=25.5
Q ss_pred HHHHHHHHHHhcccCCCCCCCceEEEEeCCCC-CCHHHHHhcC
Q 002285 781 GAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQ-KDEDIYTFFE 822 (942)
Q Consensus 781 G~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~-nDEdMF~~~~ 822 (942)
-..++.+++.++ .+++.+++||| .. +|..+=+.++
T Consensus 233 p~~~~~a~~~~~------~~~~~~~~VGD-~~~~Di~~A~~aG 268 (311)
T PLN02645 233 TFMMDYLANKFG------IEKSQICMVGD-RLDTDILFGQNGG 268 (311)
T ss_pred HHHHHHHHHHcC------CCcccEEEEcC-CcHHHHHHHHHcC
Confidence 345566777776 46788999999 86 8887766664
No 364
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=22.22 E-value=1e+02 Score=32.10 Aligned_cols=39 Identities=8% Similarity=0.138 Sum_probs=31.9
Q ss_pred CCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccC
Q 002285 633 KLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYN 672 (942)
Q Consensus 633 ~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~ 672 (942)
.+.|.+.++|+.|.+ .|.+++|+|+.+...+...+..++
T Consensus 94 ~~~~g~~~~L~~L~~-~g~~~~i~Tn~~~~~~~~~l~~~~ 132 (221)
T TIGR02253 94 RVYPGVRDTLMELRE-SGYRLGIITDGLPVKQWEKLERLG 132 (221)
T ss_pred CCCCCHHHHHHHHHH-CCCEEEEEeCCchHHHHHHHHhCC
Confidence 356789999999987 589999999998887777776654
No 365
>cd04248 AAK_AK-Ectoine AAK_AK-Ectoine: Amino Acid Kinase Superfamily (AAK), AK-Ectoine; this CD includes the N-terminal catalytic domain of the aspartokinase of the ectoine (1,4,5,6-tetrahydro-2-methyl pyrimidine-4-carboxylate) biosynthetic pathway found in Methylomicrobium alcaliphilum, Vibrio cholerae, and other various halotolerant or halophilic bacteria. Bacteria exposed to hyperosmotic stress accumulate organic solutes called 'compatible solutes' of which ectoine, a heterocyclic amino acid, is one. Apart from its osmotic function, ectoine also exhibits a protective effect on proteins, nucleic acids and membranes against a variety of stress factors. de novo synthesis of ectoine starts with the phosphorylation of L-aspartate and shares its first two enzymatic steps with the biosynthesis of amino acids of the aspartate family: aspartokinase and L-aspartate-semialdehyde dehydrogenase. The M. alcaliphilum and the V. cholerae aspartokinases are encoded on the ectABCask operon.
Probab=21.83 E-value=3e+02 Score=31.06 Aligned_cols=47 Identities=9% Similarity=0.185 Sum_probs=27.7
Q ss_pred hcccCCEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCC
Q 002285 597 YLQSNNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGS 659 (942)
Q Consensus 597 y~~s~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR 659 (942)
.++...+..++|..|-.... .......+.+.+..+. +...|.|++|-
T Consensus 152 L~~~Gi~A~~vD~~~~~~~~--------------~~t~~~~i~~~~~~~~--~~~~v~IvtGF 198 (304)
T cd04248 152 LQNRGVNARFVDLSGWRDSG--------------DMTLDERISEAFRDID--PRDELPIVTGY 198 (304)
T ss_pred HHHCCCCeEEECcccccccC--------------CCCcHHHHHHHHHhhc--cCCcEEEeCCc
Confidence 34455678888887653311 1123355666666543 35679999994
No 366
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=21.73 E-value=1.8e+02 Score=30.85 Aligned_cols=35 Identities=17% Similarity=0.136 Sum_probs=26.5
Q ss_pred CCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhh
Q 002285 633 KLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNF 668 (942)
Q Consensus 633 ~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~ 668 (942)
.+-|.+.+.|+.|.+ .|..++|+|+-+...+...+
T Consensus 93 ~~~~g~~e~L~~Lk~-~g~~~~i~Tn~~~~~~~~~l 127 (224)
T PRK14988 93 VLREDTVPFLEALKA-SGKRRILLTNAHPHNLAVKL 127 (224)
T ss_pred CcCCCHHHHHHHHHh-CCCeEEEEeCcCHHHHHHHH
Confidence 456778999999987 58899999987666655444
No 367
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=21.38 E-value=1.8e+02 Score=34.48 Aligned_cols=64 Identities=13% Similarity=0.101 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCcCCCCCCCCCCCCcccccccccccccCCccCCCCccc
Q 002285 780 KGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEPELPFESPAGPRANAADHLRRSSISQIPQAKSGPKVR 859 (942)
Q Consensus 780 KG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 859 (942)
|-..+..+++.++ ++.+++||| ..+|..+-+.+
T Consensus 387 kP~~~~~al~~l~--------~~~~v~VGD-s~~Di~aAk~A-------------------------------------- 419 (459)
T PRK06698 387 KSDLVKSILNKYD--------IKEAAVVGD-RLSDINAAKDN-------------------------------------- 419 (459)
T ss_pred CcHHHHHHHHhcC--------cceEEEEeC-CHHHHHHHHHC--------------------------------------
Q ss_pred ccccccchhhhhhcccccCCCcccccccccccccCCCcccccCCCceEEEEeCCCCCc------cceecCCHHHHHHHHH
Q 002285 860 FRKQRSLSSIERKVSNYLTGGIWRPAMRDRMTLNEGSSVLDLRGENYFSCTVSRKRSN------ARYFLGSSGDVVTLLN 933 (942)
Q Consensus 860 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~VG~~~s~------A~y~l~~~~~V~~~L~ 933 (942)
+..+|.|..+... |.|.+++..++..+|.
T Consensus 420 ---------------------------------------------G~~~I~v~~~~~~~~~~~~~d~~i~~l~el~~~l~ 454 (459)
T PRK06698 420 ---------------------------------------------GLIAIGCNFDFAQEDELAQADIVIDDLLELKGILS 454 (459)
T ss_pred ---------------------------------------------CCeEEEEeCCCCcccccCCCCEEeCCHHHHHHHHH
Q ss_pred Hh
Q 002285 934 EL 935 (942)
Q Consensus 934 ~L 935 (942)
..
T Consensus 455 ~~ 456 (459)
T PRK06698 455 TV 456 (459)
T ss_pred HH
No 368
>TIGR02399 salt_tol_Pase glucosylglycerol 3-phosphatase. Proteins in this family are glucosylglycerol-phosphate phosphatase, with the gene symbol stpA (Salt Tolerance Protein A). A motif characteristic of acid phosphatases is found, but otherwise this family shows little sequence similarity to other phosphatases. This enzyme acts on the glucosylglycerol phosphate, product of glucosylglycerol phosphate synthase and immediate precursor of the osmoprotectant glucosylglycerol.
Probab=21.32 E-value=1.3e+02 Score=34.15 Aligned_cols=49 Identities=18% Similarity=0.233 Sum_probs=40.8
Q ss_pred cccCCEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCC
Q 002285 598 LQSNNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGS 659 (942)
Q Consensus 598 ~~s~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR 659 (942)
.++++.||+=|+||.=.+.+.|| ...++.+.-+.+-+.|.. .++|.|--
T Consensus 4 ~~~~nlLiVQDLDGVCmpLVkDP---------ltR~ld~~Yv~A~~~l~~----~F~VLTnG 52 (389)
T TIGR02399 4 INTENLLIVQDLDGVCIPLVKDP---------LTRKLDSKYVFAVKNLEK----EFYVLTNG 52 (389)
T ss_pred cCCCCeEEEecCCccchhhccCc---------ccccCCHHHHHHHHHhcC----cEEEEeCC
Confidence 46778899999999999999999 678899988888888764 67777743
No 369
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=21.29 E-value=3.4e+02 Score=35.46 Aligned_cols=38 Identities=18% Similarity=0.192 Sum_probs=32.5
Q ss_pred CChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccC
Q 002285 634 LHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYN 672 (942)
Q Consensus 634 ~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~ 672 (942)
|-++++++++.|.+ .|++|+++||-........-.+++
T Consensus 548 pr~~v~~aI~~l~~-AGI~v~MiTGD~~~TA~aIa~~~G 585 (917)
T COG0474 548 PREDVKEAIEELRE-AGIKVWMITGDHVETAIAIAKECG 585 (917)
T ss_pred CCccHHHHHHHHHH-CCCcEEEECCCCHHHHHHHHHHcC
Confidence 56789999999887 699999999999988887777655
No 370
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=21.00 E-value=1.2e+02 Score=32.80 Aligned_cols=39 Identities=13% Similarity=-0.020 Sum_probs=32.8
Q ss_pred CCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccC
Q 002285 633 KLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYN 672 (942)
Q Consensus 633 ~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~ 672 (942)
.+-|.+.+.|+.|.+ .|..++|+|+.+...++..+..++
T Consensus 108 ~l~pgv~e~L~~L~~-~g~~l~I~Tn~~~~~~~~~l~~~g 146 (248)
T PLN02770 108 KPLNGLYKLKKWIED-RGLKRAAVTNAPRENAELMISLLG 146 (248)
T ss_pred CcCccHHHHHHHHHH-cCCeEEEEeCCCHHHHHHHHHHcC
Confidence 345678999999986 599999999999999998887764
No 371
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=20.83 E-value=1.2e+02 Score=31.05 Aligned_cols=38 Identities=21% Similarity=0.279 Sum_probs=31.5
Q ss_pred CChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccC
Q 002285 634 LHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYN 672 (942)
Q Consensus 634 ~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~ 672 (942)
+-|.+.++|++|.+ .|..++|+|+-+...++..+..++
T Consensus 93 ~~~~~~~~L~~L~~-~g~~~~i~Sn~~~~~~~~~l~~~g 130 (198)
T TIGR01428 93 PHPDVPAGLRALKE-RGYRLAILSNGSPAMLKSLVKHAG 130 (198)
T ss_pred CCCCHHHHHHHHHH-CCCeEEEEeCCCHHHHHHHHHHCC
Confidence 45678899999987 589999999999988887776654
No 372
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=20.72 E-value=1.2e+02 Score=37.92 Aligned_cols=69 Identities=16% Similarity=0.217 Sum_probs=52.6
Q ss_pred hhhhhcccCCEEEEEecCCccCCCCCccCCCCCccccCCCCCChhHHHHHHHhhhCCCCeEEEEcCCChhhHHHhhcccC
Q 002285 593 AVDSYLQSNNRLLILGFNATLTAPVDFLGRRGGQIREMEPKLHPDLKEPLKRLCDDPMTTVVVLSGSDRNVLDDNFGEYN 672 (942)
Q Consensus 593 ~~~~y~~s~~rLi~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~aL~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~ 672 (942)
..+.+.+...+.+++-+|++++-... ..-.+-+++++++++|.+ .|.+++++||-...........++
T Consensus 416 ~~~~~a~~G~~~l~va~~~~~lG~i~-----------l~D~~R~~~~eai~~Lr~-~GI~vvMiTGDn~~TA~aIA~elG 483 (679)
T PRK01122 416 AVDEVARKGGTPLVVAEDNRVLGVIY-----------LKDIVKPGIKERFAELRK-MGIKTVMITGDNPLTAAAIAAEAG 483 (679)
T ss_pred HHHHHHhCCCcEEEEEECCeEEEEEE-----------EeccCchhHHHHHHHHHH-CCCeEEEECCCCHHHHHHHHHHcC
Confidence 34556666677788888988775421 122367899999999987 699999999999999988887766
Q ss_pred c
Q 002285 673 M 673 (942)
Q Consensus 673 l 673 (942)
+
T Consensus 484 I 484 (679)
T PRK01122 484 V 484 (679)
T ss_pred C
Confidence 5
No 373
>KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=20.60 E-value=5.1e+02 Score=32.08 Aligned_cols=162 Identities=14% Similarity=0.109 Sum_probs=85.0
Q ss_pred HHHHHHHHHHhHHhCCCCCCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHhhccccCCcCcccEEEeCCCCCHHHHHHHH
Q 002285 389 IPQKILAFEKFLEENPSWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRYGTLTTVPIHHLDRSLDFHALCALY 468 (942)
Q Consensus 389 i~~lL~Af~~ll~~~P~~~~~vvLvqi~~psrgd~~~y~~l~~~l~~lv~~IN~~~~~~~~~pV~~l~~~v~~~el~aly 468 (942)
-+..|+.+.++|+.-|+-+ ++|+ .-|.-|+ +.++. .+.+....-. .|+|..- ...+|-..-+
T Consensus 772 dP~~l~~W~~ILk~VPnS~--Lwll--rfPa~ge----~rf~t----y~~~~Gl~p~-----riifs~v-a~k~eHvrr~ 833 (966)
T KOG4626|consen 772 DPSTLQMWANILKRVPNSV--LWLL--RFPAVGE----QRFRT----YAEQLGLEPD-----RIIFSPV-AAKEEHVRRG 833 (966)
T ss_pred CHHHHHHHHHHHHhCCcce--eEEE--eccccch----HHHHH----HHHHhCCCcc-----ceeeccc-cchHHHHHhh
Confidence 3678899999999999854 4444 5555443 22333 3333322211 2444322 2346666778
Q ss_pred HHccEEEECCCCCCCChhHHHHHhhccCCCceEEEeCC-------CCccccc--CCceEEECCCCHHHHHHHHHHHhCCC
Q 002285 469 AITDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEF-------AGAAQSL--GAGAILVNPWNITEVASSIGYALNMP 539 (942)
Q Consensus 469 ~~ADv~v~pSl~EG~~Lv~lEamA~~~~~~G~lIlSe~-------~G~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~ 539 (942)
..|||++-|++.-|-- +-+|-+.+ |+++++=- .|++... |-+-++++ +.++..+.-.++-++.
T Consensus 834 ~LaDv~LDTplcnGhT-Tg~dvLw~-----GvPmVTmpge~lAsrVa~Sll~~~Gl~hliak--~~eEY~~iaV~Latd~ 905 (966)
T KOG4626|consen 834 QLADVCLDTPLCNGHT-TGMDVLWA-----GVPMVTMPGETLASRVAASLLTALGLGHLIAK--NREEYVQIAVRLATDK 905 (966)
T ss_pred hhhhhcccCcCcCCcc-cchhhhcc-----CCceeecccHHHHHHHHHHHHHHcccHHHHhh--hHHHHHHHHHHhhcCH
Confidence 9999999999988753 34555565 54444311 1111111 32223333 3444443323333333
Q ss_pred HHHHHHHHHH--HhHHHHhcCHHHHHHHHHHHHHHhHHH
Q 002285 540 ADEREKRHLH--NFMHVTTHTSQEWAATFVSELNDTIVE 576 (942)
Q Consensus 540 ~~er~~r~~~--~~~~v~~~~~~~W~~~fl~~L~~~~~~ 576 (942)
+..++.|++- .+.----++...|+..+.+.....|+.
T Consensus 906 ~~L~~lr~~l~~~r~~splfd~~q~~~~LE~~y~~MW~~ 944 (966)
T KOG4626|consen 906 EYLKKLRAKLRKARASSPLFDTKQYAKGLERLYLQMWKK 944 (966)
T ss_pred HHHHHHHHHHHHHhcCCCccCchHHHHHHHHHHHHHHHH
Confidence 3333333321 111123467888988887777776665
No 374
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=20.59 E-value=63 Score=32.65 Aligned_cols=37 Identities=14% Similarity=0.073 Sum_probs=29.6
Q ss_pred HHHHHHHHHHHhcccCCCCCCCceEEEEeCCCCCCHHHHHhcCc
Q 002285 780 KGAAIDRILGEIVRHKGLKTPIDYVLCIGHFLQKDEDIYTFFEP 823 (942)
Q Consensus 780 KG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMF~~~~~ 823 (942)
|-..+..+++.++ ++++.+++||| ..+|.++-+.++-
T Consensus 105 ~~~~~~~~~~~~~------~~~~e~l~IGD-~~~Di~~A~~aGi 141 (161)
T TIGR01261 105 KIKLLEPYLKKNL------IDKARSYVIGD-RETDMQLAENLGI 141 (161)
T ss_pred CHHHHHHHHHHcC------CCHHHeEEEeC-CHHHHHHHHHCCC
Confidence 4566778888876 56799999999 9999888777764
No 375
>PRK09581 pleD response regulator PleD; Reviewed
Probab=20.21 E-value=1.3e+03 Score=26.29 Aligned_cols=78 Identities=12% Similarity=0.150 Sum_probs=49.0
Q ss_pred HHHHHHHHHH--ccEEEECCC-CCCCChhHHHHHhhccCC-Cc-eEEEeCCCCccccc-----CCceEEECCCCHHHHHH
Q 002285 461 FHALCALYAI--TDVALVTSL-RDGMNLVSYEFVACQASK-KG-VLILSEFAGAAQSL-----GAGAILVNPWNITEVAS 530 (942)
Q Consensus 461 ~~el~aly~~--ADv~v~pSl-~EG~~Lv~lEamA~~~~~-~G-~lIlSe~~G~~~~l-----g~~gllVnP~D~~~lA~ 530 (942)
..+....+.. .|++++-.. .+.-|+..++.+...... .. ++++|..+...... |..+++..|.+.+++..
T Consensus 35 ~~~~~~~~~~~~~dlvi~d~~~~~~~g~~l~~~i~~~~~~~~~~ii~~s~~~~~~~~~~~~~~ga~~~l~kp~~~~~l~~ 114 (457)
T PRK09581 35 GAEAIAICEREQPDIILLDVMMPGMDGFEVCRRLKSDPATTHIPVVMVTALDDPEDRVRGLEAGADDFLTKPINDVALFA 114 (457)
T ss_pred HHHHHHHHhhcCCCEEEEeCCCCCCCHHHHHHHHHcCcccCCCCEEEEECCCCHHHHHHHHHCCCCEEEECCCCHHHHHH
Confidence 3444555443 577776543 344567777877643211 12 36666655433221 77899999999999999
Q ss_pred HHHHHhCC
Q 002285 531 SIGYALNM 538 (942)
Q Consensus 531 aI~~aL~m 538 (942)
++..++.+
T Consensus 115 ~i~~~~~~ 122 (457)
T PRK09581 115 RVKSLTRL 122 (457)
T ss_pred HHHHHHHH
Confidence 99888753
Done!