BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 002286
         (942 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|359484435|ref|XP_002279485.2| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Vitis
           vinifera]
 gi|297738576|emb|CBI27821.3| unnamed protein product [Vitis vinifera]
          Length = 1091

 Score = 1679 bits (4348), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 798/924 (86%), Positives = 862/924 (93%)

Query: 1   MACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFR 60
           MA VYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGK++QFR
Sbjct: 1   MASVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKIDQFR 60

Query: 61  QILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKA 120
           QILEEGSSPEIDEYYADVRYERIAILNALG YY+YLGKIETKQREKEEHFILATQYYNKA
Sbjct: 61  QILEEGSSPEIDEYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFILATQYYNKA 120

Query: 121 SRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSD 180
           SRIDMHE STWVGKGQLLLAKG+VEQA +AFKIVL+ DRDNVPALLGQACVEFNRGRYSD
Sbjct: 121 SRIDMHEASTWVGKGQLLLAKGDVEQAFAAFKIVLDGDRDNVPALLGQACVEFNRGRYSD 180

Query: 181 SLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVM 240
           SL+ YKRALQV+P CP A+R+GIGLC YKLGQ  KAR+AFQR LQLDPENVEALVAL +M
Sbjct: 181 SLDLYKRALQVYPDCPAAVRVGIGLCCYKLGQFEKARKAFQRVLQLDPENVEALVALGIM 240

Query: 241 DLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 300
           DL  N+A+GIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH
Sbjct: 241 DLHTNDASGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 300

Query: 301 GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRS 360
           GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKE NKPH+F+ PYYGLGQVQLKLGDFRS
Sbjct: 301 GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKESNKPHDFVLPYYGLGQVQLKLGDFRS 360

Query: 361 ALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 420
           +L+NFEKVLE+YP+NCE LKALGHIYVQLGQ EKAQE LRKA KIDPRDAQAF+DLGELL
Sbjct: 361 SLSNFEKVLEVYPENCEALKALGHIYVQLGQTEKAQEYLRKATKIDPRDAQAFLDLGELL 420

Query: 421 ISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIW 480
           I+SDTGAALDAFKTAR LLKK GEEVPIE+LNNIGV++FE+GEFE A Q+FK+A+GDGIW
Sbjct: 421 ITSDTGAALDAFKTARGLLKKGGEEVPIELLNNIGVLYFERGEFELAEQTFKEAVGDGIW 480

Query: 481 LTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHD 540
           L+ +D K  +Y  DA  SM  FKDMQLFH+ E DG+ VELPWNKVTVLFNLARLLEQ+++
Sbjct: 481 LSFIDDKAYSYANDARTSMHHFKDMQLFHQLEEDGHFVELPWNKVTVLFNLARLLEQLNN 540

Query: 541 TVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLG 600
           T  AS+LYRLILFK+ DY+DAYLRLAAIAKARNN+QLSIELV +ALKVN K PN+L MLG
Sbjct: 541 TKTASILYRLILFKFPDYIDAYLRLAAIAKARNNIQLSIELVGDALKVNDKGPNSLCMLG 600

Query: 601 DLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKA 660
           DLELKNDDWVKAKETFR+ASDATDGKDSYATLSLGNWNYFAA+R+EKRAPKLEATHLEKA
Sbjct: 601 DLELKNDDWVKAKETFRSASDATDGKDSYATLSLGNWNYFAAIRSEKRAPKLEATHLEKA 660

Query: 661 KELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINL 720
           KELYTRV+VQH +NLYAANGAGVVLAEKG FDVSKD+FTQVQEAASGSVFVQMPDVWINL
Sbjct: 661 KELYTRVLVQHNANLYAANGAGVVLAEKGHFDVSKDIFTQVQEAASGSVFVQMPDVWINL 720

Query: 721 AHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLA 780
           AHVYFAQGNFALA+KMYQNCLRKFYYNTD+Q+LLYLARTHYEAEQWQDCKK+LLRAIHLA
Sbjct: 721 AHVYFAQGNFALAVKMYQNCLRKFYYNTDSQVLLYLARTHYEAEQWQDCKKTLLRAIHLA 780

Query: 781 PSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGF 840
           PSNYTLRFDAGVAMQKFSASTLQKT+RTADEVRSTVAEL+NAVR+FS LSAASNLH HGF
Sbjct: 781 PSNYTLRFDAGVAMQKFSASTLQKTKRTADEVRSTVAELKNAVRIFSQLSAASNLHFHGF 840

Query: 841 DEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEAARQAALAEEARRKAEEQKKYL 900
           DEKKI THV YCKHLL+AAK+H EAAEREE QNR R E ARQ  LAEEARRKAEEQ+K+ 
Sbjct: 841 DEKKIETHVGYCKHLLEAAKVHCEAAEREELQNRHRVELARQVNLAEEARRKAEEQRKFQ 900

Query: 901 LEKRKLEDEQKRLRQQEEHFQRVK 924
           LE+RK EDE KR+ QQE+HF+RVK
Sbjct: 901 LERRKQEDELKRVMQQEQHFERVK 924


>gi|356530423|ref|XP_003533781.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Glycine
           max]
          Length = 1086

 Score = 1664 bits (4310), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 786/924 (85%), Positives = 864/924 (93%), Gaps = 4/924 (0%)

Query: 1   MACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFR 60
           MA VYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWL+IAREYFKQGK++QFR
Sbjct: 1   MASVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLVIAREYFKQGKIDQFR 60

Query: 61  QILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKA 120
           QILEEGSSPEID+YYADVRYERIAILNALG YY+YLGKIETKQREKEEHFILATQYYNKA
Sbjct: 61  QILEEGSSPEIDDYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFILATQYYNKA 120

Query: 121 SRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSD 180
           SRIDMHEPSTWVGKGQLLLAKGEVEQAS+AFKIVL+ DRDNVPALLGQACVEFNRGRYSD
Sbjct: 121 SRIDMHEPSTWVGKGQLLLAKGEVEQASAAFKIVLDGDRDNVPALLGQACVEFNRGRYSD 180

Query: 181 SLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVM 240
           SLE YKRAL V+P CP A+RLGIGLCRYKLGQ  KA+QAF+R   LDPENVEALVALA+M
Sbjct: 181 SLELYKRALLVYPDCPAAVRLGIGLCRYKLGQFEKAQQAFER---LDPENVEALVALAIM 237

Query: 241 DLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 300
           DL+ NEA GIR GM KMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH
Sbjct: 238 DLRTNEATGIRTGMVKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 297

Query: 301 GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRS 360
           GPTKSHSYYNLARSYHSKGDY+KAG+YYMASVKE+NKPHEF+FPYYGLGQVQ+KLGDF+S
Sbjct: 298 GPTKSHSYYNLARSYHSKGDYDKAGVYYMASVKEVNKPHEFVFPYYGLGQVQIKLGDFKS 357

Query: 361 ALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 420
           AL+NFEKVLE+YPDNCETLKALGHIYVQLGQ +K Q+ +RKA KIDPRDAQAF++LGELL
Sbjct: 358 ALSNFEKVLEVYPDNCETLKALGHIYVQLGQTDKGQDFIRKATKIDPRDAQAFLELGELL 417

Query: 421 ISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIW 480
           I SDTGAALDAFKTARTL KK G+EVPIE+LNNIGV+ FE+GEFE A Q+FK+ALGDG+W
Sbjct: 418 ILSDTGAALDAFKTARTLFKKGGQEVPIELLNNIGVLQFERGEFELAQQTFKEALGDGVW 477

Query: 481 LTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHD 540
           L+ ++ + K+  IDA+ S LQFKDM+LFH  E++G+HVE+PW+KVTVLFNLARLLEQ++D
Sbjct: 478 LSFINEEKKS-SIDAATSTLQFKDMKLFHDLESNGHHVEVPWDKVTVLFNLARLLEQLND 536

Query: 541 TVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLG 600
           +  AS+LYRL+LFKY DY+DAYLRLAAIAKARNN+ LSIELVN+ALKVN K PNALSMLG
Sbjct: 537 SGTASILYRLVLFKYPDYIDAYLRLAAIAKARNNILLSIELVNDALKVNNKCPNALSMLG 596

Query: 601 DLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKA 660
           +LELKNDDWVKAKET RAASDAT+GKDSYA+LSLGNWNYFAA+RNEKR PKLEATHLEKA
Sbjct: 597 ELELKNDDWVKAKETLRAASDATEGKDSYASLSLGNWNYFAAVRNEKRNPKLEATHLEKA 656

Query: 661 KELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINL 720
           KELYTRV++QH+SNLYAANGA VVLAEKG FDVSKD+FTQVQEAASGSVFVQMPDVWINL
Sbjct: 657 KELYTRVLIQHSSNLYAANGAAVVLAEKGHFDVSKDIFTQVQEAASGSVFVQMPDVWINL 716

Query: 721 AHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLA 780
           AHVYFAQGNF LA+KMYQNCLRKFY+NTD+QILLYLARTHYEAEQWQDC K+LLRAIHLA
Sbjct: 717 AHVYFAQGNFTLAVKMYQNCLRKFYHNTDSQILLYLARTHYEAEQWQDCIKTLLRAIHLA 776

Query: 781 PSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGF 840
           PSNYTLRFDAGVAMQKFSASTLQK +RTADEVR+TVAEL+NAVRVFS LSAASNLH+HGF
Sbjct: 777 PSNYTLRFDAGVAMQKFSASTLQKAKRTADEVRATVAELQNAVRVFSQLSAASNLHIHGF 836

Query: 841 DEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEAARQAALAEEARRKAEEQKKYL 900
           DEKKI+THV YC HLL AAK+H EAAEREEQQ RQRQE ARQ A AEEARRKAEEQ+K+ 
Sbjct: 837 DEKKIDTHVGYCNHLLSAAKVHLEAAEREEQQVRQRQELARQVAFAEEARRKAEEQRKFQ 896

Query: 901 LEKRKLEDEQKRLRQQEEHFQRVK 924
           +E+RK EDE KR++QQEEHF+RVK
Sbjct: 897 MERRKQEDELKRVQQQEEHFRRVK 920


>gi|356556372|ref|XP_003546500.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Glycine
           max]
          Length = 1088

 Score = 1664 bits (4308), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 784/924 (84%), Positives = 862/924 (93%), Gaps = 1/924 (0%)

Query: 1   MACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFR 60
           MA VYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGK++Q+R
Sbjct: 1   MASVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKIDQYR 60

Query: 61  QILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKA 120
           QILEEGSSPEIDEYYADVRYERIAILNALG YY+YLGKIETKQREKEEHFILATQYYNKA
Sbjct: 61  QILEEGSSPEIDEYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFILATQYYNKA 120

Query: 121 SRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSD 180
           SRIDMHEPSTWVGKGQLLLAKGEVEQAS+AFKIVL+ D DNVPALLGQACVEFNRGR+SD
Sbjct: 121 SRIDMHEPSTWVGKGQLLLAKGEVEQASAAFKIVLDGDHDNVPALLGQACVEFNRGRFSD 180

Query: 181 SLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVM 240
           SLE YKR LQV+P+CP A+RLGIGLCRYKLGQ  KA+QAF+R LQLDPENVE+L+ALA+M
Sbjct: 181 SLELYKRVLQVYPNCPAAVRLGIGLCRYKLGQFEKAQQAFERVLQLDPENVESLIALAIM 240

Query: 241 DLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 300
           DL+ NEA GIR GM KMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH
Sbjct: 241 DLRTNEATGIRTGMVKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 300

Query: 301 GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRS 360
           GPTKSHSYYNLARSYHSKGDY+KAG+YYMASVKE+NKPHEF+FPYYGLGQVQ+KLGDF+S
Sbjct: 301 GPTKSHSYYNLARSYHSKGDYDKAGVYYMASVKEVNKPHEFVFPYYGLGQVQIKLGDFKS 360

Query: 361 ALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 420
           AL+NFEKVLE+YPDNCETLKALGHIYVQLGQ +K Q+ +RKA KIDPRDAQAF++LGELL
Sbjct: 361 ALSNFEKVLEVYPDNCETLKALGHIYVQLGQTDKGQDFIRKATKIDPRDAQAFLELGELL 420

Query: 421 ISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIW 480
           I SDTGAALDAFKTA TL KK G+EVPIE+LNNIGV+ FE+GEFE A Q+FK+ALGDG+W
Sbjct: 421 ILSDTGAALDAFKTAHTLFKKGGQEVPIELLNNIGVLQFERGEFELARQTFKEALGDGVW 480

Query: 481 LTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHD 540
           L+ ++ + K+  IDA+ S LQFKDMQLFH  E++G+HVE+PW+KVTVLFNLARLLEQ++D
Sbjct: 481 LSFINEENKS-SIDAATSTLQFKDMQLFHDLESNGHHVEVPWDKVTVLFNLARLLEQLYD 539

Query: 541 TVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLG 600
           +  AS+ YRLILFKY DY+DAYLRLAAIAKARNN+ LSIELVN+ALKVN K PNALSMLG
Sbjct: 540 SGTASIFYRLILFKYPDYIDAYLRLAAIAKARNNILLSIELVNDALKVNNKCPNALSMLG 599

Query: 601 DLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKA 660
           +LELKNDDWVKAKET R ASDATDGKDSYATLSLGNWNYFAA+RNEKR PKLEATHLEKA
Sbjct: 600 ELELKNDDWVKAKETLRTASDATDGKDSYATLSLGNWNYFAAVRNEKRNPKLEATHLEKA 659

Query: 661 KELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINL 720
           KEL TRV++QH+SNLYAANGA VVLAEKG FDVSKD+FTQVQEAASGSVFVQMPDVWINL
Sbjct: 660 KELCTRVLIQHSSNLYAANGAAVVLAEKGHFDVSKDIFTQVQEAASGSVFVQMPDVWINL 719

Query: 721 AHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLA 780
           AHVYFAQGNF LA+KMYQNCLRKFY+NTD+QILLYLARTHYEAEQWQDC K+LLRAIHLA
Sbjct: 720 AHVYFAQGNFTLAVKMYQNCLRKFYHNTDSQILLYLARTHYEAEQWQDCIKTLLRAIHLA 779

Query: 781 PSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGF 840
           PSNYTLRFDAGVAMQKFSASTLQK +RTADEVR+TVAEL+NAVRVFS LSAASNLH+HGF
Sbjct: 780 PSNYTLRFDAGVAMQKFSASTLQKAKRTADEVRATVAELQNAVRVFSQLSAASNLHIHGF 839

Query: 841 DEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEAARQAALAEEARRKAEEQKKYL 900
           DEKKI+THV YC HLL AAK+H EAAE EEQQ RQRQE ARQ ALAEEARRKAEEQ+K+ 
Sbjct: 840 DEKKIDTHVGYCNHLLSAAKVHLEAAEHEEQQVRQRQELARQVALAEEARRKAEEQRKFQ 899

Query: 901 LEKRKLEDEQKRLRQQEEHFQRVK 924
           +E+RK EDE KR+++QEEHF+RVK
Sbjct: 900 MERRKQEDELKRVQKQEEHFRRVK 923


>gi|224068420|ref|XP_002326116.1| PAF1 complex component [Populus trichocarpa]
 gi|222833309|gb|EEE71786.1| PAF1 complex component [Populus trichocarpa]
          Length = 1056

 Score = 1647 bits (4264), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 790/924 (85%), Positives = 855/924 (92%), Gaps = 3/924 (0%)

Query: 1   MACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFR 60
           MA VYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGK++QFR
Sbjct: 1   MAFVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKLDQFR 60

Query: 61  QILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKA 120
           QILEEGSS EIDEYYADVRYERIAILNALG YY+YLGK+ETKQREKEE+FI AT++YNKA
Sbjct: 61  QILEEGSSHEIDEYYADVRYERIAILNALGAYYSYLGKVETKQREKEEYFIQATKHYNKA 120

Query: 121 SRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSD 180
           SRIDMHEPSTWVGKGQLLLAKGEVEQAS+AF+IVLE DRDNV ALLGQACVE++RG Y +
Sbjct: 121 SRIDMHEPSTWVGKGQLLLAKGEVEQASAAFRIVLEGDRDNVSALLGQACVEYSRGHYGE 180

Query: 181 SLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVM 240
           SL  +KRALQV+P CPGA+RLGIG C YKLG +GKA  AFQR   LDPENVEALV+LA++
Sbjct: 181 SLTLFKRALQVYPDCPGAVRLGIGHCHYKLGHVGKACLAFQR---LDPENVEALVSLAIL 237

Query: 241 DLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 300
           DLQ NEAA IRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH
Sbjct: 238 DLQTNEAAAIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 297

Query: 301 GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRS 360
           GPTKSHSYYNLARSYHSKGDYE A  YY ASVKEINKP EF+FPYYGLGQVQLKLG+ ++
Sbjct: 298 GPTKSHSYYNLARSYHSKGDYETASRYYWASVKEINKPSEFVFPYYGLGQVQLKLGEIKN 357

Query: 361 ALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 420
           AL+NFEKVLE+YPDNCETLK LGHIYVQLGQ EKAQE LRKAAKIDPRDAQAF+DLGELL
Sbjct: 358 ALSNFEKVLEVYPDNCETLKVLGHIYVQLGQTEKAQEFLRKAAKIDPRDAQAFLDLGELL 417

Query: 421 ISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIW 480
           IS+DTGAALDAFKTAR+LLKK GEEVPIEVLNNI VIHFE+ E E A Q+FK+ALGDGIW
Sbjct: 418 ISTDTGAALDAFKTARSLLKKGGEEVPIEVLNNIAVIHFEREELELALQNFKEALGDGIW 477

Query: 481 LTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHD 540
           LT L+ K  TY +DA++S+LQ+KDMQ+F R E +G+ VEL WNKVT LFNLARLLEQ+H+
Sbjct: 478 LTFLEGKANTYEVDATSSLLQYKDMQIFRRLEEEGHSVELSWNKVTTLFNLARLLEQLHN 537

Query: 541 TVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLG 600
           T  AS LYRLILFKY DYVDAYLRLAAIAKARNNL LSIELVNEAL VN K PNALSMLG
Sbjct: 538 TETASTLYRLILFKYPDYVDAYLRLAAIAKARNNLPLSIELVNEALTVNDKCPNALSMLG 597

Query: 601 DLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKA 660
           DLELKNDDWVKAKETFRAAS+ATDGKDSYATLSLGNWNYFAA+RNEKR PKLEATHLEKA
Sbjct: 598 DLELKNDDWVKAKETFRAASEATDGKDSYATLSLGNWNYFAAIRNEKRNPKLEATHLEKA 657

Query: 661 KELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINL 720
           KELYTRV+VQHT+NLYAANGAGVVLAEKG FDVSKDLFTQVQEAASGS+FVQMPDVWINL
Sbjct: 658 KELYTRVLVQHTANLYAANGAGVVLAEKGHFDVSKDLFTQVQEAASGSIFVQMPDVWINL 717

Query: 721 AHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLA 780
           AHVYFAQGNFALA+KMYQNCL+KF+YNTD+QILLYLARTHYEAEQWQDCK++LLRAIHL 
Sbjct: 718 AHVYFAQGNFALAVKMYQNCLQKFFYNTDSQILLYLARTHYEAEQWQDCKRTLLRAIHLT 777

Query: 781 PSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGF 840
           PSNYTLRFDAGVAMQKFSASTLQKT+RT DEVRSTV ELENAVR+FS LSAASNL+ +GF
Sbjct: 778 PSNYTLRFDAGVAMQKFSASTLQKTKRTVDEVRSTVDELENAVRLFSQLSAASNLYFNGF 837

Query: 841 DEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEAARQAALAEEARRKAEEQKKYL 900
           DEKKINTHVEYCKHLL+AA +HREAAEREEQQNRQR + ARQ ALAEEARRKAEEQ+K+ 
Sbjct: 838 DEKKINTHVEYCKHLLEAAIVHREAAEREEQQNRQRLDLARQMALAEEARRKAEEQRKFQ 897

Query: 901 LEKRKLEDEQKRLRQQEEHFQRVK 924
           LE+RK EDE KR+RQQEEHF+RVK
Sbjct: 898 LERRKQEDELKRVRQQEEHFERVK 921


>gi|449452556|ref|XP_004144025.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Cucumis
           sativus]
          Length = 1074

 Score = 1631 bits (4223), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 781/934 (83%), Positives = 853/934 (91%), Gaps = 3/934 (0%)

Query: 1   MACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFR 60
           MACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGK+EQFR
Sbjct: 1   MACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKLEQFR 60

Query: 61  QILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKA 120
           QILEEGSSPEIDEYYADVRYERIAILNALG YY+YLGKIETKQREKEEHFILATQYYNKA
Sbjct: 61  QILEEGSSPEIDEYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFILATQYYNKA 120

Query: 121 SRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSD 180
           SRIDMHEPSTWVGKGQLLL KGEVEQA +AFKIVL+ DRDNVPALLGQACVEFNRG YS+
Sbjct: 121 SRIDMHEPSTWVGKGQLLLTKGEVEQAFAAFKIVLDGDRDNVPALLGQACVEFNRGHYSE 180

Query: 181 SLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVM 240
           SLE YKRALQV+P CP A+RLGIGLCRY+L Q GKA+QAF+R   LDPENVEALV LA++
Sbjct: 181 SLELYKRALQVYPDCPAAVRLGIGLCRYQLKQYGKAQQAFER---LDPENVEALVGLAII 237

Query: 241 DLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 300
           DL  NEA  IR GMEKMQRAFEIYP+CAMALNYLANHFFFTGQHFLVEQLTETALA+TNH
Sbjct: 238 DLNTNEAGRIRNGMEKMQRAFEIYPFCAMALNYLANHFFFTGQHFLVEQLTETALAITNH 297

Query: 301 GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRS 360
           GPTKSHS+YNLARSYHSKGDYEKAGLYYMAS KE NKP EF+FPYYGLGQVQLK+GD RS
Sbjct: 298 GPTKSHSFYNLARSYHSKGDYEKAGLYYMASAKEANKPREFVFPYYGLGQVQLKMGDLRS 357

Query: 361 ALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 420
           AL+NFEKVLE+YPDNCETLK LGHIYVQLGQ EKAQE LRKA KIDPRDAQAF+DLGELL
Sbjct: 358 ALSNFEKVLEVYPDNCETLKVLGHIYVQLGQAEKAQESLRKATKIDPRDAQAFLDLGELL 417

Query: 421 ISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIW 480
           IS+D  AALDAFKTA  LLKK G+EVPIEVLNN+GV+HFE+ EFE A + FK+ALGDGIW
Sbjct: 418 ISTDESAALDAFKTASILLKKGGQEVPIEVLNNLGVLHFEREEFELAERIFKEALGDGIW 477

Query: 481 LTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHD 540
           L  +D K +   I+ASAS+LQ+KD++LF++ E +G  + LPW KVT LFNLARLLEQ+H 
Sbjct: 478 LDFIDGKVRCPAIEASASVLQYKDVELFYQLEREGRAIVLPWKKVTSLFNLARLLEQLHR 537

Query: 541 TVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLG 600
              +SVLYRLILFKY DYVDAYLRLA+IAKARN +QLSIELVN+ALKVN K  NALSMLG
Sbjct: 538 IEVSSVLYRLILFKYPDYVDAYLRLASIAKARNYVQLSIELVNDALKVNDKCSNALSMLG 597

Query: 601 DLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKA 660
           +LELKNDDWV+AKETFRAA +ATDGKDSYATLSLGNWNYFAALRNEKR PKLEATHLEK+
Sbjct: 598 ELELKNDDWVRAKETFRAAGEATDGKDSYATLSLGNWNYFAALRNEKRNPKLEATHLEKS 657

Query: 661 KELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINL 720
           KELYTRV+VQH +NLYAANGAGV+LAEKGQFDVSKD+FTQVQEAASG++FVQMPDVWINL
Sbjct: 658 KELYTRVLVQHPANLYAANGAGVILAEKGQFDVSKDIFTQVQEAASGNIFVQMPDVWINL 717

Query: 721 AHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLA 780
           AHVYFAQGNF+LA+KMYQNCLRKFYYNTD QILLYLART+YEAEQWQDCKK+LLRAIHLA
Sbjct: 718 AHVYFAQGNFSLAVKMYQNCLRKFYYNTDYQILLYLARTYYEAEQWQDCKKTLLRAIHLA 777

Query: 781 PSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGF 840
           PSNYTLRFDAGVAMQKFSASTLQKT+RTADEVRSTVAELENAVRVFS LSAASNLH HGF
Sbjct: 778 PSNYTLRFDAGVAMQKFSASTLQKTKRTADEVRSTVAELENAVRVFSQLSAASNLHFHGF 837

Query: 841 DEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEAARQAALAEEARRKAEEQKKYL 900
           DEKKI+THV YCKHLL+AA +H +AAE EEQQ RQRQE ARQ ALAE+ARRKA+EQ+K+ 
Sbjct: 838 DEKKIDTHVGYCKHLLEAAGVHLKAAEHEEQQIRQRQELARQVALAEDARRKADEQRKFQ 897

Query: 901 LEKRKLEDEQKRLRQQEEHFQRVKARIFYICSIK 934
           LE+RKLEDE+KR+ QQE+HF+RVK +   I   K
Sbjct: 898 LERRKLEDEEKRMMQQEQHFKRVKEQWKSITPAK 931


>gi|255550483|ref|XP_002516292.1| tpr repeat nuclear phosphoprotein, putative [Ricinus communis]
 gi|223544778|gb|EEF46294.1| tpr repeat nuclear phosphoprotein, putative [Ricinus communis]
          Length = 1065

 Score = 1589 bits (4115), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 768/924 (83%), Positives = 831/924 (89%), Gaps = 27/924 (2%)

Query: 1   MACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFR 60
           MA VYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGK+EQFR
Sbjct: 1   MASVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKLEQFR 60

Query: 61  QILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKA 120
           QILEEGSS +IDEYYADV+Y+RIAILNALG YY+YLGKIETKQREKEE+FI AT+YYNKA
Sbjct: 61  QILEEGSSNDIDEYYADVKYDRIAILNALGAYYSYLGKIETKQREKEEYFIQATRYYNKA 120

Query: 121 SRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSD 180
           SRIDMHEPSTWVGKGQLLLAKGE+EQA +AFKIVLE DRDNV ALLGQACVE+NR  Y++
Sbjct: 121 SRIDMHEPSTWVGKGQLLLAKGEIEQAYNAFKIVLEGDRDNVSALLGQACVEYNRSHYNE 180

Query: 181 SLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVM 240
           SL+ YKRALQVHP CPG+                           LDPENVEALV+LA++
Sbjct: 181 SLKSYKRALQVHPECPGS---------------------------LDPENVEALVSLAIL 213

Query: 241 DLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 300
           DLQ NE  GIR+GME MQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH
Sbjct: 214 DLQTNEVNGIRRGMESMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 273

Query: 301 GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRS 360
           GPTKSHS+YNLARSYHSKGDYE A  YY ASVKE NKP EF+FPYYGLGQVQLKLG+ ++
Sbjct: 274 GPTKSHSFYNLARSYHSKGDYETASRYYWASVKETNKPSEFVFPYYGLGQVQLKLGEIKN 333

Query: 361 ALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 420
           AL+NFEKVLE+YPDNCETLK LGHIY QLGQ EKAQE LRKA KIDPRDAQAF+DLGELL
Sbjct: 334 ALSNFEKVLEVYPDNCETLKVLGHIYAQLGQTEKAQEYLRKATKIDPRDAQAFLDLGELL 393

Query: 421 ISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIW 480
           ISSDTGAALDA KTAR+LLKK G EVP+EVLNNIGVI+FE+ E E A ++FK+A+GDGIW
Sbjct: 394 ISSDTGAALDALKTARSLLKKGGHEVPVEVLNNIGVIYFEREELELALETFKEAVGDGIW 453

Query: 481 LTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHD 540
           L  LD K KTY IDA+AS+L +KDMQ FH+ E DG+ VEL W+KVT LFNLARLLEQ+H+
Sbjct: 454 LAFLDGKAKTYTIDAAASILHYKDMQFFHQLEQDGHRVELTWDKVTALFNLARLLEQMHN 513

Query: 541 TVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLG 600
              A+VLY LILFKY DYVDAYLRLAAI+KARNNLQLSIELVNEALKVN K PNALSMLG
Sbjct: 514 IETANVLYVLILFKYPDYVDAYLRLAAISKARNNLQLSIELVNEALKVNDKCPNALSMLG 573

Query: 601 DLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKA 660
           DLELKNDDWVKAKETFRAAS+ATDGKDSYA LSLGNWNYFAA+RNEKR PKLEATHLEKA
Sbjct: 574 DLELKNDDWVKAKETFRAASEATDGKDSYAILSLGNWNYFAAIRNEKRNPKLEATHLEKA 633

Query: 661 KELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINL 720
           KELYTRV+VQHT+NLYAANGAGVVLAEKG FDVSKDLF +VQEAASGS+FVQMPDVWINL
Sbjct: 634 KELYTRVLVQHTANLYAANGAGVVLAEKGHFDVSKDLFMEVQEAASGSIFVQMPDVWINL 693

Query: 721 AHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLA 780
           AHVYFAQGNFALA+KMYQNCLRKFYY+TD+QILLYLARTHYEAEQWQ+CKK+LLRAIHLA
Sbjct: 694 AHVYFAQGNFALAVKMYQNCLRKFYYSTDSQILLYLARTHYEAEQWQECKKTLLRAIHLA 753

Query: 781 PSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGF 840
           PSNY LRFDAGVAMQKFSASTLQKT+RT DEVRSTV ELENAVR+FS LSA+SNLH HGF
Sbjct: 754 PSNYILRFDAGVAMQKFSASTLQKTKRTVDEVRSTVDELENAVRLFSQLSASSNLHFHGF 813

Query: 841 DEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEAARQAALAEEARRKAEEQKKYL 900
           DEKKINTHVEYCKHLL+AAK+HREAAEREEQQNRQRQE ARQ ALAEEARRKAEEQKK+L
Sbjct: 814 DEKKINTHVEYCKHLLEAAKVHREAAEREEQQNRQRQEVARQMALAEEARRKAEEQKKFL 873

Query: 901 LEKRKLEDEQKRLRQQEEHFQRVK 924
           LEKRK EDE KR+RQQEEHF+RVK
Sbjct: 874 LEKRKQEDELKRVRQQEEHFERVK 897


>gi|449500473|ref|XP_004161106.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymerase-associated protein
           CTR9 homolog [Cucumis sativus]
          Length = 1050

 Score = 1580 bits (4091), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 762/934 (81%), Positives = 830/934 (88%), Gaps = 27/934 (2%)

Query: 1   MACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFR 60
           MACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGK+EQFR
Sbjct: 1   MACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKLEQFR 60

Query: 61  QILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKA 120
           QILEEGSSPEIDEYYADVRYERIAILNALG YY+YLGKIETKQREKEEHFILATQYYNKA
Sbjct: 61  QILEEGSSPEIDEYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFILATQYYNKA 120

Query: 121 SRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSD 180
           SRIDMHEPSTWVGKGQLLL KGEVEQA +AFKIVL+ DRDNVPALLGQACVEFNRG YS+
Sbjct: 121 SRIDMHEPSTWVGKGQLLLTKGEVEQAFAAFKIVLDGDRDNVPALLGQACVEFNRGHYSE 180

Query: 181 SLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVM 240
           SLE YKRALQV+P CP A                           LDPENVEALV LA++
Sbjct: 181 SLELYKRALQVYPDCPAA---------------------------LDPENVEALVGLAII 213

Query: 241 DLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 300
           DL  NEA  IR GMEKMQRAFEIYP+CAMALNYLANHFFFTGQHFLVEQLTETALA+TNH
Sbjct: 214 DLNTNEAGRIRNGMEKMQRAFEIYPFCAMALNYLANHFFFTGQHFLVEQLTETALAITNH 273

Query: 301 GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRS 360
           GPTKSHS+YNLARSYHSKGDYEKAGLYYMAS KE NKP EF+FPYYGLGQVQLK+GD RS
Sbjct: 274 GPTKSHSFYNLARSYHSKGDYEKAGLYYMASAKEANKPREFVFPYYGLGQVQLKMGDLRS 333

Query: 361 ALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 420
           AL+NFEKVLE+YPDNCETLK LGHIYVQLGQ EKAQE LRKA KIDPRDAQAF+DLGELL
Sbjct: 334 ALSNFEKVLEVYPDNCETLKVLGHIYVQLGQAEKAQESLRKATKIDPRDAQAFLDLGELL 393

Query: 421 ISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIW 480
           IS+D  AALDAFKTA  LLKK G+EVPIEVLNN+GV+HFE+ EFE A + FK+ALGDGIW
Sbjct: 394 ISTDESAALDAFKTASILLKKGGQEVPIEVLNNLGVLHFEREEFELAERIFKEALGDGIW 453

Query: 481 LTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHD 540
           L  +D K +   I+ASAS+LQ+KD++LF++ E +G  + LPW KVT LFNLARLLEQ+H 
Sbjct: 454 LDFIDGKVRCPAIEASASVLQYKDVELFYQLEREGRAIVLPWKKVTSLFNLARLLEQLHR 513

Query: 541 TVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLG 600
              +SVLYRLILFKY DYVDAYLRLA+IAKARN +QLSIELVN+ALKVN K  NALSMLG
Sbjct: 514 IEVSSVLYRLILFKYPDYVDAYLRLASIAKARNYVQLSIELVNDALKVNDKCSNALSMLG 573

Query: 601 DLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKA 660
           +LE KNDDWV+AKETFRAA +ATDGKDSYATLSLGNWNYFAALRNEKR PKLEATHLEK+
Sbjct: 574 ELEXKNDDWVRAKETFRAAGEATDGKDSYATLSLGNWNYFAALRNEKRNPKLEATHLEKS 633

Query: 661 KELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINL 720
           KELYTRV+VQH +NLYAANGAGV+LAEKGQFDVSKD+FTQVQEAASG++FVQMPDVWINL
Sbjct: 634 KELYTRVLVQHPANLYAANGAGVILAEKGQFDVSKDIFTQVQEAASGNIFVQMPDVWINL 693

Query: 721 AHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLA 780
           AHVYFAQGNF+LA+KMYQNCLRKFYYNTD QILLYLART+YEAEQWQDCKK+LLRAIHLA
Sbjct: 694 AHVYFAQGNFSLAVKMYQNCLRKFYYNTDYQILLYLARTYYEAEQWQDCKKTLLRAIHLA 753

Query: 781 PSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGF 840
           PSNYTLRFDAGVAMQKFSASTLQKT+RTADEVRSTVAELENAVRVFS LSAASNLH HGF
Sbjct: 754 PSNYTLRFDAGVAMQKFSASTLQKTKRTADEVRSTVAELENAVRVFSQLSAASNLHFHGF 813

Query: 841 DEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEAARQAALAEEARRKAEEQKKYL 900
           DEKKI+THV YCKHLL+AA +H +AAE EEQQ RQRQE ARQ ALAE+ARRKA+EQ+K+ 
Sbjct: 814 DEKKIDTHVGYCKHLLEAAGVHLKAAEHEEQQIRQRQELARQVALAEDARRKADEQRKFQ 873

Query: 901 LEKRKLEDEQKRLRQQEEHFQRVKARIFYICSIK 934
           LE+RKLEDE+KR+ QQE+HF+RVK +   I   K
Sbjct: 874 LERRKLEDEEKRMMQQEQHFKRVKEQWKSITPAK 907


>gi|240254442|ref|NP_178674.6| protein early flowering 8 [Arabidopsis thaliana]
 gi|207079706|tpd|FAA00428.1| TPA: VERNALIZATION INDEPENDENCE 6 [Arabidopsis thaliana]
 gi|330250911|gb|AEC06005.1| protein early flowering 8 [Arabidopsis thaliana]
          Length = 1091

 Score = 1561 bits (4042), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 736/925 (79%), Positives = 829/925 (89%), Gaps = 3/925 (0%)

Query: 1   MACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFR 60
           MA VYIPVQNSEEEVRV LDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGK+EQFR
Sbjct: 1   MASVYIPVQNSEEEVRVVLDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKIEQFR 60

Query: 61  QILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKA 120
           QILEEGSS +IDEYYADV+YERIAILNALG YY+YLGK ETK REKEE FI AT+YYNKA
Sbjct: 61  QILEEGSSSDIDEYYADVKYERIAILNALGAYYSYLGKTETKNREKEEQFISATRYYNKA 120

Query: 121 SRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSD 180
           SRIDMHEPSTWVGKGQLLLAKGE++ A  AFKIVL+   DNVPALLGQA VEFNRGR+S+
Sbjct: 121 SRIDMHEPSTWVGKGQLLLAKGEIDNALQAFKIVLDTAPDNVPALLGQASVEFNRGRFSE 180

Query: 181 SLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVM 240
           SL+ YKRALQV P CP A+RLGIGLCRYKLGQL KARQAF R LQLDP+NVEALVAL +M
Sbjct: 181 SLQLYKRALQVFPGCPAAVRLGIGLCRYKLGQLDKARQAFDRVLQLDPDNVEALVALGIM 240

Query: 241 DLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 300
           DLQAN++ G+RKGM++MQ+AFEIYPYCA ALNYLANHFFFTGQHFLVEQLTETALAVT H
Sbjct: 241 DLQANDSIGMRKGMDRMQQAFEIYPYCASALNYLANHFFFTGQHFLVEQLTETALAVTTH 300

Query: 301 GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINK-PHEFIFPYYGLGQVQLKLGDFR 359
           GPTKSHS+YNLARSYHSKGD+EKAG+YYMA++KE N  PHEF+FPY+GLGQVQLKLG+ +
Sbjct: 301 GPTKSHSFYNLARSYHSKGDFEKAGMYYMAAIKETNNNPHEFVFPYFGLGQVQLKLGELK 360

Query: 360 SALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGEL 419
            ++ NFEKVLE+YPDNCETLKALGH+Y QLGQ EKA E +RKA K+DPRDAQAF+ LGEL
Sbjct: 361 GSVFNFEKVLEVYPDNCETLKALGHLYTQLGQNEKALEYMRKATKLDPRDAQAFVGLGEL 420

Query: 420 LISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGI 479
           LISSDTGAALDAFK ARTL+KK G+EVPIEVLN+IG +HFE+ EFESA ++FK+ALGDGI
Sbjct: 421 LISSDTGAALDAFKMARTLMKKGGQEVPIEVLNDIGALHFEREEFESALENFKEALGDGI 480

Query: 480 WLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIH 539
           W++ LD K    +     S+L +KD  +FHR    G+ V++PWNKVT LFNLARLLEQIH
Sbjct: 481 WISFLDEKEN--LEQTGVSVLGYKDTGIFHRLIESGHSVDVPWNKVTTLFNLARLLEQIH 538

Query: 540 DTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSML 599
            T AA+ +YRLILFKY  Y+DAYLRLAA AKA+NNL L+IELVNEALKV+ K PNALS+L
Sbjct: 539 KTEAATFMYRLILFKYPGYIDAYLRLAASAKAQNNLPLAIELVNEALKVDDKNPNALSLL 598

Query: 600 GDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEK 659
           G+LELKNDDWVKAKETFRAA+DATDGKDSYA LSLGNWNYFAA+RNEKR PKLEATHLEK
Sbjct: 599 GELELKNDDWVKAKETFRAANDATDGKDSYAILSLGNWNYFAAMRNEKRNPKLEATHLEK 658

Query: 660 AKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWIN 719
           AKELYT+V+ QH SN+YAANG+G+VLAEKGQFD++KD+FTQVQEAASGSVF+QMPDVW+N
Sbjct: 659 AKELYTKVLTQHNSNMYAANGSGIVLAEKGQFDIAKDVFTQVQEAASGSVFLQMPDVWVN 718

Query: 720 LAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHL 779
           LAHVYFAQGNFAL +KMYQNCLRKF+YNTD+QILLYLARTHYEAEQWQ+CKK+LLRAIHL
Sbjct: 719 LAHVYFAQGNFALTVKMYQNCLRKFFYNTDSQILLYLARTHYEAEQWQECKKTLLRAIHL 778

Query: 780 APSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHG 839
            PSNYT RFD G  MQK S+STLQK +RTADEVRSTVAE ENAVRVF+ LSAAS+LH+HG
Sbjct: 779 TPSNYTFRFDLGAVMQKSSSSTLQKKKRTADEVRSTVAEAENAVRVFTQLSAASDLHVHG 838

Query: 840 FDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEAARQAALAEEARRKAEEQKKY 899
           FD KKI THV+YC HLL+AAK+HREAAE+EE QNRQR E ARQAALAEEARRKAEEQ+KY
Sbjct: 839 FDSKKIQTHVQYCSHLLEAAKVHREAAEQEELQNRQRLEVARQAALAEEARRKAEEQRKY 898

Query: 900 LLEKRKLEDEQKRLRQQEEHFQRVK 924
            LEKRK E+E +RL+Q+EE FQR+K
Sbjct: 899 QLEKRKQEEELRRLKQEEEKFQRIK 923


>gi|297835872|ref|XP_002885818.1| hypothetical protein ARALYDRAFT_480219 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297331658|gb|EFH62077.1| hypothetical protein ARALYDRAFT_480219 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1058

 Score = 1493 bits (3865), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 713/925 (77%), Positives = 803/925 (86%), Gaps = 30/925 (3%)

Query: 1   MACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFR 60
           MA VYIPVQNSEEEVRV LDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGK+EQFR
Sbjct: 1   MASVYIPVQNSEEEVRVVLDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKIEQFR 60

Query: 61  QILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKA 120
           QILEEGSS +IDEYYADV+YERIAILNALG YY+YLGK ETK REKEE FILAT+YYNKA
Sbjct: 61  QILEEGSSSDIDEYYADVKYERIAILNALGAYYSYLGKTETKHREKEEQFILATRYYNKA 120

Query: 121 SRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSD 180
           SRIDMHEPSTWVGKGQLLLAKGE++ A  AFKIVL+   DNVPALLGQA VEFNRGR+S+
Sbjct: 121 SRIDMHEPSTWVGKGQLLLAKGEIDNALQAFKIVLDTAPDNVPALLGQASVEFNRGRFSE 180

Query: 181 SLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVM 240
           SL  YKRALQV P CP A                           LDP+NVEALVAL +M
Sbjct: 181 SLNLYKRALQVFPGCPAA---------------------------LDPDNVEALVALGIM 213

Query: 241 DLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 300
           DLQAN++ G+RKGM++MQ+AFEIYPYCA ALNYLANHFFFTGQHFLVEQLTETALAVT H
Sbjct: 214 DLQANDSIGMRKGMDRMQQAFEIYPYCASALNYLANHFFFTGQHFLVEQLTETALAVTTH 273

Query: 301 GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEI-NKPHEFIFPYYGLGQVQLKLGDFR 359
           GPTKSHS+YNLARSYHSKGDYEKAG+YYMA++KE  NKP EF+FPY+GLGQVQLKLG+ +
Sbjct: 274 GPTKSHSFYNLARSYHSKGDYEKAGMYYMAAIKETNNKPQEFVFPYFGLGQVQLKLGELK 333

Query: 360 SALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGEL 419
            ++ NFEKVLE+YPDNCETLKALGH+Y QLGQ +KA E +RKA K+DPRDAQAF+ LGEL
Sbjct: 334 GSVFNFEKVLEVYPDNCETLKALGHLYTQLGQNDKALEYMRKATKLDPRDAQAFVGLGEL 393

Query: 420 LISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGI 479
           LISSDTGAALDAFK ARTL+KK G+EVPIEVLN+IG +HFE+ EFESA  +FK+ALGDGI
Sbjct: 394 LISSDTGAALDAFKMARTLMKKGGQEVPIEVLNDIGALHFEREEFESALDNFKEALGDGI 453

Query: 480 WLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIH 539
           W++ LD K    +     S+L +KD  +FHR    G+ V++PWNKVT LFNLARLLEQ+H
Sbjct: 454 WISFLDEKEN--LEQTGVSVLGYKDTGIFHRLIESGHSVDVPWNKVTTLFNLARLLEQLH 511

Query: 540 DTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSML 599
            T AA+ LY+LILFKY  Y+DAYLRLAA AKA+NNL L+IELVNEALKV+ K PNALS+L
Sbjct: 512 KTEAATFLYQLILFKYPGYIDAYLRLAASAKAQNNLPLAIELVNEALKVDDKNPNALSLL 571

Query: 600 GDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEK 659
           G+LELKNDDWVKAKETFRAA+DATDGKDSYA LSLGNWNYFAA+RNEKR PKLEATHLEK
Sbjct: 572 GELELKNDDWVKAKETFRAANDATDGKDSYAILSLGNWNYFAAMRNEKRNPKLEATHLEK 631

Query: 660 AKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWIN 719
           AKELYT+V+ QH SN+YAANG+G+VLAEKGQFD++KD+FTQVQEAASGSVF+QMPDVW+N
Sbjct: 632 AKELYTKVLTQHNSNMYAANGSGIVLAEKGQFDIAKDVFTQVQEAASGSVFLQMPDVWVN 691

Query: 720 LAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHL 779
           LAHVYFAQGNFALA+KMYQNCLRKF+ NTD+QILLYLARTHYEAEQWQ+CKK+LLRAIHL
Sbjct: 692 LAHVYFAQGNFALAVKMYQNCLRKFFNNTDSQILLYLARTHYEAEQWQECKKTLLRAIHL 751

Query: 780 APSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHG 839
            PSNYT RFD G  MQK S+STLQK +RTADEVRSTVAE ENAVRVF+ LSAAS+LH+HG
Sbjct: 752 TPSNYTFRFDLGAVMQKSSSSTLQKKKRTADEVRSTVAEAENAVRVFTQLSAASDLHVHG 811

Query: 840 FDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEAARQAALAEEARRKAEEQKKY 899
           FD KKI THV+YC HLL+AAK+HREAAEREE QNRQR E ARQAALAEEARRKAEEQ+KY
Sbjct: 812 FDSKKIQTHVQYCSHLLEAAKVHREAAEREELQNRQRLEVARQAALAEEARRKAEEQRKY 871

Query: 900 LLEKRKLEDEQKRLRQQEEHFQRVK 924
            LEKRK E+E +RL+Q+EE  QR+K
Sbjct: 872 QLEKRKQEEELRRLKQEEEKIQRIK 896


>gi|20197768|gb|AAM15237.1| putative TPR repeat nuclear phosphoprotein [Arabidopsis thaliana]
          Length = 1115

 Score = 1478 bits (3825), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 717/972 (73%), Positives = 809/972 (83%), Gaps = 73/972 (7%)

Query: 1   MACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFR 60
           MA VYIPVQNSEEEVRV LDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGK+EQFR
Sbjct: 1   MASVYIPVQNSEEEVRVVLDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKIEQFR 60

Query: 61  QILEEGSSP---------------EIDEYYADVRYERIAILNALGVYYTYLGKIETKQRE 105
           QILEEGSS                +IDEYYADV+YERIAILNALG YY+YLGK ETK RE
Sbjct: 61  QILEEGSSSGKQLYDDAASICSRIDIDEYYADVKYERIAILNALGAYYSYLGKTETKNRE 120

Query: 106 KEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPAL 165
           KEE FI AT+YYNKASRIDMHEPSTWVGKGQLLLAKGE++ A  AFKIVL+   DNVPAL
Sbjct: 121 KEEQFISATRYYNKASRIDMHEPSTWVGKGQLLLAKGEIDNALQAFKIVLDTAPDNVPAL 180

Query: 166 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRA-- 223
           LGQA VEFNRGR+S+SL+                        YKLGQL KARQAF R   
Sbjct: 181 LGQASVEFNRGRFSESLQL-----------------------YKLGQLDKARQAFDRVLQ 217

Query: 224 ------------------------------LQLDPENVEALVALAVMDLQANEAAGIRKG 253
                                         LQLDP+NVEALVAL +MDLQAN++ G+RKG
Sbjct: 218 ASGTGMFISSSYDIADCMRQQIVLITIILFLQLDPDNVEALVALGIMDLQANDSIGMRKG 277

Query: 254 MEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLAR 313
           M++MQ+AFEIYPYCA ALNYLANHFFFTGQHFLVEQLTETALAVT HGPTKSHS+YNLAR
Sbjct: 278 MDRMQQAFEIYPYCASALNYLANHFFFTGQHFLVEQLTETALAVTTHGPTKSHSFYNLAR 337

Query: 314 SYHSKGDYEKAGLYYMASVKEI-NKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIY 372
           SYHSKGD+EKAG+YYMA++KE  N PHEF+FPY+GLGQVQLKLG+ + ++ NFEKVLE+Y
Sbjct: 338 SYHSKGDFEKAGMYYMAAIKETNNNPHEFVFPYFGLGQVQLKLGELKGSVFNFEKVLEVY 397

Query: 373 PDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAF 432
           PDNCETLKALGH+Y QLGQ EKA E +RKA K+DPRDAQAF+ LGELLISSDTGAALDAF
Sbjct: 398 PDNCETLKALGHLYTQLGQNEKALEYMRKATKLDPRDAQAFVGLGELLISSDTGAALDAF 457

Query: 433 KTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYV 492
           K ARTL+KK G+EVPIEVLN+IG +HFE+ EFESA ++FK+ALGDGIW++ LD K    +
Sbjct: 458 KMARTLMKKGGQEVPIEVLNDIGALHFEREEFESALENFKEALGDGIWISFLDEKEN--L 515

Query: 493 IDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLIL 552
                S+L +KD  +FHR    G+ V++PWNKVT LFNLARLLEQIH T AA+ +YRLIL
Sbjct: 516 EQTGVSVLGYKDTGIFHRLIESGHSVDVPWNKVTTLFNLARLLEQIHKTEAATFMYRLIL 575

Query: 553 FKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKA 612
           FKY  Y+DAYLRLAA AKA+NNL L+IELVNEALKV+ K PNALS+LG+LELKNDDWVKA
Sbjct: 576 FKYPGYIDAYLRLAASAKAQNNLPLAIELVNEALKVDDKNPNALSLLGELELKNDDWVKA 635

Query: 613 KETFRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHT 672
           KETFRAA+DATDGKDSYA LSLGNWNYFAA+RNEKR PKLEATHLEKAKELYT+V+ QH 
Sbjct: 636 KETFRAANDATDGKDSYAILSLGNWNYFAAMRNEKRNPKLEATHLEKAKELYTKVLTQHN 695

Query: 673 SNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFAL 732
           SN+YAANG+G+VLAEKGQFD++KD+FTQVQEAASGSVF+QMPDVW+NLAHVYFAQGNFAL
Sbjct: 696 SNMYAANGSGIVLAEKGQFDIAKDVFTQVQEAASGSVFLQMPDVWVNLAHVYFAQGNFAL 755

Query: 733 AMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGV 792
            +KMYQNCLRKF+YNTD+QILLYLARTHYEAEQWQ+CKK+LLRAIHL PSNYT RFD G 
Sbjct: 756 TVKMYQNCLRKFFYNTDSQILLYLARTHYEAEQWQECKKTLLRAIHLTPSNYTFRFDLGA 815

Query: 793 AMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGFDEKKINTHVEYC 852
            MQK S+STLQK +RTADEVRSTVAE ENAVRVF+ LSAAS+LH+HGFD KKI THV+YC
Sbjct: 816 VMQKSSSSTLQKKKRTADEVRSTVAEAENAVRVFTQLSAASDLHVHGFDSKKIQTHVQYC 875

Query: 853 KHLLDAAKIHREAAEREEQQNRQRQEAARQAALAEEARRKAEEQKKYLLEKRKLEDEQKR 912
            HLL+AAK+HREAAE+EE QNRQR E ARQAALAEEARRKAEEQ+KY LEKRK E+E +R
Sbjct: 876 SHLLEAAKVHREAAEQEELQNRQRLEVARQAALAEEARRKAEEQRKYQLEKRKQEEELRR 935

Query: 913 LRQQEEHFQRVK 924
           L+Q+EE FQR+K
Sbjct: 936 LKQEEEKFQRIK 947


>gi|23095913|dbj|BAC16228.1| putative TPR-containing nuclear phosphoprotein [Oryza sativa
           Japonica Group]
          Length = 1069

 Score = 1369 bits (3543), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 644/936 (68%), Positives = 780/936 (83%), Gaps = 16/936 (1%)

Query: 1   MACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFR 60
           MA VYIPVQ +EEEVRVALDQLP DASDILDILKAEQAPL LWLIIAREYFKQGK+EQFR
Sbjct: 1   MASVYIPVQGTEEEVRVALDQLPADASDILDILKAEQAPLHLWLIIAREYFKQGKIEQFR 60

Query: 61  QILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKA 120
           QILEEGS PEIDEYYADV+YERIAILNALG ++T+LGK+E  Q +KE HF  ATQ YN+A
Sbjct: 61  QILEEGSGPEIDEYYADVKYERIAILNALGAFHTFLGKVERAQ-QKEVHFKEATQCYNRA 119

Query: 121 SRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGR--- 177
           SRID  EPSTW+G+GQL + K +++ AS +FKIVL+ D  N PALLGQA V F  G    
Sbjct: 120 SRIDETEPSTWIGRGQLCVVKHDLQMASDSFKIVLDEDGSNFPALLGQASVYFLMGDSEQ 179

Query: 178 --------YSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPE 229
                   Y +SL+ YKRAL+ + SCP A+RLGI  CRYKLGQ  KARQAFQR LQLDPE
Sbjct: 180 QHKKALDYYRNSLDLYKRALRAYTSCPAAVRLGIAFCRYKLGQSDKARQAFQRVLQLDPE 239

Query: 230 NVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQ 289
           N++ALVALA+MDLQ NEA GIR+GMEKM+RAFEIYPYC +ALN+LANH+FFTGQHF+VEQ
Sbjct: 240 NIDALVALAIMDLQTNEAGGIRRGMEKMRRAFEIYPYCTLALNHLANHYFFTGQHFVVEQ 299

Query: 290 LTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLG 349
           LTETAL+ +NHG  KSH++YNLARSYHSKGD E AG YYMASV EI+KP +F+ P++GLG
Sbjct: 300 LTETALSSSNHGLLKSHAFYNLARSYHSKGDIETAGRYYMASVNEISKPQDFVLPFFGLG 359

Query: 350 QVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRD 409
           Q+QLK  D++S+L +FEKVLE++P+NCE+LKA+GHIY + G+ +KA E  +K  +IDP+D
Sbjct: 360 QIQLKFADYKSSLASFEKVLEVHPENCESLKAIGHIYAKSGENDKAIETFKKVTRIDPKD 419

Query: 410 AQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQ 469
            QAF++LGELL+ SD   A++  KTAR LLKKAGE++PIE+LN IG++HFEKGE E A Q
Sbjct: 420 HQAFMELGELLVQSDWATAMEYLKTARNLLKKAGEKIPIELLNGIGLLHFEKGELEMAEQ 479

Query: 470 SFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLF 529
           SFK+ALGDG W++++D    + V++ S   +Q++D   F + E +G  +ELPW+KVT LF
Sbjct: 480 SFKEALGDGFWVSIIDGSVGSSVVNWS---IQYRDQSFFQQLEEEGTPLELPWDKVTTLF 536

Query: 530 NLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVN 589
           N ARL E++HDTV AS+ YRLI+FKY DY+D YLRLAAIAK +NNLQLSIEL+ +ALK++
Sbjct: 537 NYARLFEELHDTVKASLFYRLIIFKYPDYIDTYLRLAAIAKEKNNLQLSIELIGDALKID 596

Query: 590 GKYPNALSMLGDLELKNDD-WVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRNEKR 648
            KYPNALSMLG LEL+ D+ W+ AKE FR A DA++GKD+Y+ L LGNWNYFAA R EK+
Sbjct: 597 DKYPNALSMLGSLELQGDETWLTAKEHFREAKDASEGKDTYSMLQLGNWNYFAANRPEKK 656

Query: 649 APKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGS 708
           APK EATH EKAKELY+ V+ QH  N++AANG G++ AEK Q+D++K+LFTQV EAASGS
Sbjct: 657 APKFEATHREKAKELYSNVLKQHHGNMFAANGIGILYAEKAQWDIAKELFTQVHEAASGS 716

Query: 709 VFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQD 768
           +FVQMPDVWINLAH+YFAQG F  A+KMYQNCLRKF+YNTDA ILLYLARTHYEAEQWQD
Sbjct: 717 IFVQMPDVWINLAHIYFAQGFFQQAVKMYQNCLRKFFYNTDATILLYLARTHYEAEQWQD 776

Query: 769 CKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSH 828
           C+K+LLRAIHLAPSNY LRF+ GV+MQKFSASTLQKT+RT DEVR+TV+EL+NA+RVFS 
Sbjct: 777 CRKTLLRAIHLAPSNYLLRFNVGVSMQKFSASTLQKTKRTVDEVRATVSELQNAIRVFSL 836

Query: 829 LSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEAARQAALAEE 888
           LS AS  H HGFDE+KI TH+EYCKHLLDAAK+HR+AAE+ EQQN+Q+ E ARQ ALA+E
Sbjct: 837 LSVASTYHSHGFDERKIETHIEYCKHLLDAAKVHRDAAEQAEQQNKQKMEVARQIALADE 896

Query: 889 ARRKAEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVK 924
           ARRKAEEQ+K  LE+RK EDE K++ QQE+HF+RVK
Sbjct: 897 ARRKAEEQRKAQLERRKQEDELKQVMQQEQHFERVK 932


>gi|147781154|emb|CAN67377.1| hypothetical protein VITISV_017914 [Vitis vinifera]
          Length = 788

 Score = 1349 bits (3491), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 641/742 (86%), Positives = 692/742 (93%), Gaps = 1/742 (0%)

Query: 1   MACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFR 60
           MA VYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGK++QFR
Sbjct: 1   MASVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKIDQFR 60

Query: 61  QILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKA 120
           QILEEGSSPEIDEYYADVRYERIAILNALG YY+YLGKIETKQREKEEHFILATQYYNKA
Sbjct: 61  QILEEGSSPEIDEYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFILATQYYNKA 120

Query: 121 SRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSD 180
           SRIDMHE STWVGKGQLLLAKG+VEQA +AFKIVL+ DRDNVPALLGQACVEFNRGRYSD
Sbjct: 121 SRIDMHEASTWVGKGQLLLAKGDVEQAFAAFKIVLDGDRDNVPALLGQACVEFNRGRYSD 180

Query: 181 SLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVM 240
           SL+ YKRALQV+P CP A+R+GIGLC YKLGQ  KAR+AFQR LQLDPENVEALVAL +M
Sbjct: 181 SLDLYKRALQVYPDCPAAVRVGIGLCCYKLGQFEKARKAFQRVLQLDPENVEALVALGIM 240

Query: 241 DLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 300
           DL  N+A+GIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH
Sbjct: 241 DLHTNDASGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 300

Query: 301 GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRS 360
           GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKE NKPH+F+ PYYGLGQVQLKLGDFRS
Sbjct: 301 GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKESNKPHDFVLPYYGLGQVQLKLGDFRS 360

Query: 361 ALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 420
           +L+NFEKVLE+YP+NCE LKALGHIYVQLGQ EKAQE LRKA KIDPRDAQAF+DLGELL
Sbjct: 361 SLSNFEKVLEVYPENCEALKALGHIYVQLGQTEKAQEYLRKATKIDPRDAQAFLDLGELL 420

Query: 421 ISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIW 480
           I+SDTGAALDAFKTAR LLKK GEEVPIE+LNNIGV++FE+GEFE A Q+FK+A+GDGIW
Sbjct: 421 ITSDTGAALDAFKTARGLLKKGGEEVPIELLNNIGVLYFERGEFELAEQTFKEAVGDGIW 480

Query: 481 LTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHD 540
           L+ +D K  +Y  DA  SM  FKDMQLFH+ E DG+ VELPWNKVTVLFNLARLLEQ+++
Sbjct: 481 LSFIDDKAYSYANDARTSMHHFKDMQLFHQLEEDGHFVELPWNKVTVLFNLARLLEQLNN 540

Query: 541 TVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLG 600
           T  AS+LYRLILFK+ DY+DAYLRLAAIAKARNN+QLSIELV +ALKVN K PN+L MLG
Sbjct: 541 TKTASILYRLILFKFPDYIDAYLRLAAIAKARNNIQLSIELVGDALKVNDKGPNSLCMLG 600

Query: 601 DLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKA 660
           DLELKNDDWVKAKETFR+ASDATDGKDSYATLSLGNWNYFAA+R+EKRAPKLEATHLEKA
Sbjct: 601 DLELKNDDWVKAKETFRSASDATDGKDSYATLSLGNWNYFAAIRSEKRAPKLEATHLEKA 660

Query: 661 KELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINL 720
           KELYTRV+VQH +NLYAANGAGVVLAEKG FDVSKD+FTQVQEAASGSVFVQMPDVWINL
Sbjct: 661 KELYTRVLVQHNANLYAANGAGVVLAEKGHFDVSKDIFTQVQEAASGSVFVQMPDVWINL 720

Query: 721 AHVYFAQGNFALAMK-MYQNCL 741
           AHVYFAQGNFALA+K MY +C 
Sbjct: 721 AHVYFAQGNFALAVKMMYTHCF 742


>gi|357144204|ref|XP_003573209.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog
           [Brachypodium distachyon]
          Length = 1064

 Score = 1325 bits (3428), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 644/936 (68%), Positives = 781/936 (83%), Gaps = 17/936 (1%)

Query: 1   MACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFR 60
           MA VYIPVQ +EEEVRVALD LP DASDILDILKAEQAPL LWLIIAREYFKQGK+EQFR
Sbjct: 1   MASVYIPVQGTEEEVRVALDHLPHDASDILDILKAEQAPLHLWLIIAREYFKQGKIEQFR 60

Query: 61  QILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKA 120
           QILEEGS PEIDEYYADV+YERIAILNALG ++T+LGK E +  ++E HF  ATQYYN+A
Sbjct: 61  QILEEGSGPEIDEYYADVKYERIAILNALGAFHTFLGKAE-RAPQREVHFKDATQYYNRA 119

Query: 121 SRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGR--- 177
           SRID  EPSTW+GKGQL +AKGE++ AS +FKIVL+ D DN PALLGQA V F  G    
Sbjct: 120 SRIDETEPSTWIGKGQLCVAKGEMQMASDSFKIVLDEDVDNFPALLGQASVYFLMGDMEQ 179

Query: 178 --------YSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPE 229
                   Y +SL+ YKRA++ +  CP A+RLGI  CRYK+GQL +ARQAF+R LQLDPE
Sbjct: 180 QHKKALEFYRNSLDLYKRAMRAYADCPAAVRLGIAFCRYKIGQLDRARQAFERVLQLDPE 239

Query: 230 NVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQ 289
           NV+ALVALA+MDLQ NEA  IR+GM+KM+RAFEI+PYC +ALN+LANH+FFTGQHF+VEQ
Sbjct: 240 NVDALVALAIMDLQTNEAGVIRRGMDKMRRAFEIFPYCTLALNHLANHYFFTGQHFVVEQ 299

Query: 290 LTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLG 349
           LTETAL+ +NHG  KS +YYNLARSYHSKGD E AG YY+ASVKEINKP +F+ P+ GLG
Sbjct: 300 LTETALSSSNHGLLKSQAYYNLARSYHSKGDIETAGRYYIASVKEINKPQDFVLPFVGLG 359

Query: 350 QVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRD 409
           Q+QLK GDF+ +L +FEKVLE++P+NCE+LKA+G+IY  LG+ +KA E  +K  +IDP+D
Sbjct: 360 QIQLKFGDFKRSLASFEKVLEVHPENCESLKAIGNIYANLGENDKAIETFKKVTRIDPKD 419

Query: 410 AQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQ 469
            QAF++LGELL+ SD  AA++  KTARTLLKKAGE+ P+E+LN IG+++FEK EFE A Q
Sbjct: 420 HQAFVELGELLVESDWAAAMEYLKTARTLLKKAGEKTPVELLNGIGLLYFEKAEFELAEQ 479

Query: 470 SFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLF 529
           SFK+ALGDGIWL+++D    + ++  S   +Q++D   FH  E +   +ELP +KVT LF
Sbjct: 480 SFKEALGDGIWLSIMDWSVGSSMVSWS---VQYRDQSFFHELE-ERVPLELPCDKVTTLF 535

Query: 530 NLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVN 589
           N ARLLE++HDTV AS+LYRLI+FKY DY+DAYLRLAAIAK +NN+QLSIEL+ +ALK+N
Sbjct: 536 NYARLLEELHDTVKASLLYRLIIFKYADYIDAYLRLAAIAKEKNNIQLSIELIGDALKIN 595

Query: 590 GKYPNALSMLGDLELKNDD-WVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRNEKR 648
            KYPNALSMLG LEL++D+ W+ AKE FR A D+T+GKD Y+ L LGNWNYFAA R EK+
Sbjct: 596 SKYPNALSMLGSLELQSDETWLTAKERFRDAKDSTEGKDPYSLLQLGNWNYFAANRPEKK 655

Query: 649 APKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGS 708
           APK EATH EKAKELY  V+ Q+  N++AANG G++ AEK Q+D++K+LFTQV EAASGS
Sbjct: 656 APKFEATHREKAKELYLNVLKQNPGNMFAANGIGILHAEKAQWDIAKELFTQVHEAASGS 715

Query: 709 VFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQD 768
           +FVQ+PDVWINLAH++FAQG F  A+KMYQNCLRKF+YNTDA ILLYL+RTHYEAEQWQD
Sbjct: 716 IFVQVPDVWINLAHIFFAQGLFQQAVKMYQNCLRKFFYNTDATILLYLSRTHYEAEQWQD 775

Query: 769 CKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSH 828
           C+KSLLRAIHLAPSNY LRF+ GV+MQKFSASTLQKT+RT +EVR+TV EL+NA+RVFS 
Sbjct: 776 CRKSLLRAIHLAPSNYLLRFNVGVSMQKFSASTLQKTKRTVEEVRATVTELQNAIRVFSL 835

Query: 829 LSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEAARQAALAEE 888
           LS AS  H HGFDE+KI THVEYCKHLLDAAK+HR+AAE+ EQQNRQ+ E ARQ ALAEE
Sbjct: 836 LSVASTYHSHGFDERKIETHVEYCKHLLDAAKVHRDAAEQAEQQNRQKLEVARQIALAEE 895

Query: 889 ARRKAEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVK 924
           ARR+AEEQ+K+ LE+RK EDE K++ QQE+HF+RVK
Sbjct: 896 ARRRAEEQRKFQLERRKQEDELKQVMQQEQHFERVK 931


>gi|414585831|tpg|DAA36402.1| TPA: hypothetical protein ZEAMMB73_637393 [Zea mays]
          Length = 1065

 Score = 1317 bits (3408), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 643/937 (68%), Positives = 784/937 (83%), Gaps = 20/937 (2%)

Query: 1   MACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFR 60
           M  VYIPVQ +EEEV+VALDQLP DASDILDILKAEQAPL LWLIIAREYFKQGK+EQFR
Sbjct: 1   MTSVYIPVQGTEEEVQVALDQLPHDASDILDILKAEQAPLHLWLIIAREYFKQGKIEQFR 60

Query: 61  QILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKA 120
           QILEEGS PEIDEYYADV+YERIAIL ALG ++T+LGK++ +  +KE HF  ATQYYN+A
Sbjct: 61  QILEEGSGPEIDEYYADVKYERIAILTALGAFHTFLGKVD-RAPQKESHFKDATQYYNRA 119

Query: 121 SRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG---- 176
           SRID  EPSTW+G+GQL +AKGE++ AS +FKIVL+ D +N PALLGQA V F  G    
Sbjct: 120 SRIDETEPSTWIGRGQLCIAKGELQMASDSFKIVLDEDENNFPALLGQASVYFLMGEAEQ 179

Query: 177 -------RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPE 229
                   Y +SL+ YK+AL+V+ +CP A+RLGI  CRYKLGQ+ KARQAFQR L+LDP+
Sbjct: 180 QHKKSLEHYRNSLDLYKKALRVYCNCPAAVRLGIAFCRYKLGQVEKARQAFQRVLELDPQ 239

Query: 230 NVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQ 289
           NV+ALVALA+MDLQ NEA GIR+GMEKM++AFEIYPY  +ALN+LANH+FFTGQHF+VEQ
Sbjct: 240 NVDALVALAIMDLQTNEAGGIRRGMEKMKKAFEIYPYYTLALNHLANHYFFTGQHFVVEQ 299

Query: 290 LTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLG 349
           LTETAL+ +NHG  KSH+YYNLARSYHSKGD E AG YYMASV EI+KP +F+ PY GLG
Sbjct: 300 LTETALSSSNHGLLKSHAYYNLARSYHSKGDIETAGRYYMASVNEISKPQDFVLPYIGLG 359

Query: 350 QVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRD 409
           Q+QLK GDF+S+L +FEKVLE++P+NCE+LKA+GHI+ + G+ EKA E  +K  +IDP+D
Sbjct: 360 QIQLKFGDFKSSLGSFEKVLEVHPENCESLKAIGHIHAKSGETEKAIETFKKVTRIDPKD 419

Query: 410 AQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQ 469
            QAF++LGELL+ SD  AA++  KTAR LLKKAGE VP+E+LN IG++HFEKGEFE A Q
Sbjct: 420 HQAFVELGELLVESDWAAAMEYLKTARNLLKKAGEAVPVELLNGIGLLHFEKGEFEMAEQ 479

Query: 470 SFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLF 529
           SFK+ALGDG+W++++D K  + +I+ S   +Q KD   FH+ E  G  +EL  NKVT LF
Sbjct: 480 SFKEALGDGLWVSIMDGKVGSSMINWS---VQNKDQSFFHQLE--GVPLELHSNKVTTLF 534

Query: 530 NLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVN 589
           N ARLLE++HD+V AS+ YR I+FKY DY+DAYLRLAAIAK RNN+QLSIEL+ +ALK++
Sbjct: 535 NYARLLEELHDSVRASIFYRFIIFKYPDYIDAYLRLAAIAKQRNNVQLSIELIGDALKID 594

Query: 590 GKYPNALSMLGDLELKNDD-WVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRNEKR 648
            K PNALSMLG LEL++D+ W+ AKE FR A +AT G D+Y+ L LGNWNYFAA R EK+
Sbjct: 595 EKNPNALSMLGSLELQSDEAWLTAKEHFRNAKEATKG-DTYSLLQLGNWNYFAANRPEKK 653

Query: 649 APKLEATHLEKAKELY-TRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASG 707
           APK+EATH EKA ELY T+V+ QH SN++AANG G++ AEK ++DV+K+LFTQV EAASG
Sbjct: 654 APKIEATHREKAMELYQTQVLKQHRSNMFAANGIGILYAEKAKWDVAKELFTQVHEAASG 713

Query: 708 SVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQ 767
           S+FV MPDVWINLAH YFAQG+F  A+K+YQNCLRKF++NTDA ILLYLARTHYEAE+WQ
Sbjct: 714 SIFVHMPDVWINLAHTYFAQGHFQQAVKLYQNCLRKFFHNTDATILLYLARTHYEAERWQ 773

Query: 768 DCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFS 827
           DC+K+LLRAIHLAPSNY LRF+ GV+MQKFSASTLQKT++T DEVR+TV EL+NA+RVFS
Sbjct: 774 DCRKTLLRAIHLAPSNYLLRFNVGVSMQKFSASTLQKTKQTVDEVRATVTELQNAIRVFS 833

Query: 828 HLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEAARQAALAE 887
            LS AS  H HGFDE+KI THVEYCKHLLDAAK+HR+AAE+ EQQN+Q+ E ARQ ALAE
Sbjct: 834 LLSVASTYHSHGFDERKIETHVEYCKHLLDAAKVHRDAAEQAEQQNKQKMEVARQIALAE 893

Query: 888 EARRKAEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVK 924
           EARR+AEEQ+K+ LE+R+ EDE K+++QQEEHFQRVK
Sbjct: 894 EARRRAEEQRKFQLERRREEDELKQVKQQEEHFQRVK 930


>gi|242076856|ref|XP_002448364.1| hypothetical protein SORBIDRAFT_06g025910 [Sorghum bicolor]
 gi|241939547|gb|EES12692.1| hypothetical protein SORBIDRAFT_06g025910 [Sorghum bicolor]
          Length = 1069

 Score = 1311 bits (3393), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 639/937 (68%), Positives = 781/937 (83%), Gaps = 18/937 (1%)

Query: 1   MACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFR 60
           M  VYIPVQ +EEEVRVALDQLP DASDILDILKAEQAPL LWLIIAREYFKQGK+EQFR
Sbjct: 1   MTSVYIPVQGTEEEVRVALDQLPHDASDILDILKAEQAPLHLWLIIAREYFKQGKIEQFR 60

Query: 61  QILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKA 120
           QILEEGS PEIDEYYADV+YERIAILNALG ++T+LGK++ +  +KE HF  ATQYYN+A
Sbjct: 61  QILEEGSGPEIDEYYADVKYERIAILNALGAFHTFLGKVD-RAPQKESHFKDATQYYNRA 119

Query: 121 SRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG---- 176
           SRID  EPSTW+GKGQL +AKGE++ AS +FKIVL+ D +N PALLGQA V F  G    
Sbjct: 120 SRIDETEPSTWIGKGQLCVAKGELQMASDSFKIVLDEDGNNFPALLGQASVYFLMGEGEQ 179

Query: 177 -------RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPE 229
                   Y +SL+ YKRAL+V+ +CP A+RLGI  CRYKLGQ+ KARQAFQR L+LDP+
Sbjct: 180 QHKKSLEHYRNSLDLYKRALRVYSNCPAAVRLGIAFCRYKLGQVEKARQAFQRVLELDPQ 239

Query: 230 NVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQ 289
           NV+ALVALA+MDLQ NEA GIR GMEKM++AFEIYPY  +ALN+LANH+FFTGQHF+VEQ
Sbjct: 240 NVDALVALAIMDLQTNEAGGIRSGMEKMKKAFEIYPYYTLALNHLANHYFFTGQHFVVEQ 299

Query: 290 LTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLG 349
           LTETAL+ +NH   KSH+YYNLARSYHSKGD E AG YYMASV EI+KP +F+ PY GLG
Sbjct: 300 LTETALSSSNHVLLKSHAYYNLARSYHSKGDIETAGRYYMASVNEISKPQDFVLPYIGLG 359

Query: 350 QVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRD 409
           Q+QLK GD +S+L +FEKVLE++P+NCE+LKA+GHI+ + G+ EKA E  +K  +IDP+D
Sbjct: 360 QIQLKFGDLKSSLGSFEKVLEVHPENCESLKAIGHIHAKSGETEKAIETFKKVTRIDPKD 419

Query: 410 AQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQ 469
            QAF++LGELL+ SD  AA++  KTAR LLKKAGE VP+E+LN IG++HFEKGEFE A Q
Sbjct: 420 HQAFVELGELLVESDWAAAMEYLKTARNLLKKAGEAVPVELLNGIGLLHFEKGEFEMAEQ 479

Query: 470 SFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLF 529
           SFK+ALGDG+W++++D K  + +++ S   +Q KD   FH+ E +G  +EL   KVT LF
Sbjct: 480 SFKEALGDGLWVSVMDGKVGSSMVNWS---VQNKDQSFFHQLEEEGVPLELHSIKVTTLF 536

Query: 530 NLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVN 589
           N ARLLE++HD+V AS+ YR I+FKY DY+DAYLRLAAIAK RNN+QLSIEL+ +ALK++
Sbjct: 537 NYARLLEELHDSVRASLFYRFIIFKYPDYIDAYLRLAAIAKQRNNVQLSIELIGDALKID 596

Query: 590 GKYPNALSMLGDLELKNDD-WVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRNEKR 648
            K PNALSMLG LEL++D+ W+ AKE FR+A +AT G D+Y+ L LGNWNYFAA R EK+
Sbjct: 597 EKNPNALSMLGSLELQSDETWLTAKEHFRSAKEATKG-DTYSLLQLGNWNYFAANRPEKK 655

Query: 649 APKLEATHLEKAKELY-TRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASG 707
           APK+EATH EKA ELY ++V+  H SN++AANG G++ AEK ++DV+K+LFTQV EAASG
Sbjct: 656 APKIEATHREKAMELYQSQVLKHHRSNMFAANGIGILYAEKAKWDVAKELFTQVHEAASG 715

Query: 708 SVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQ 767
           S+FV MPDVWINLAH YFAQG+F  A+KMYQNCLRKF++NTDA ILLYLARTHYEAE+WQ
Sbjct: 716 SIFVHMPDVWINLAHTYFAQGHFQQAVKMYQNCLRKFFHNTDATILLYLARTHYEAERWQ 775

Query: 768 DCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFS 827
           DC+K+LLRAIHLAPSNY LRF+ GV+MQKFSASTLQK ++T DEVR+TV EL+NA+RVFS
Sbjct: 776 DCRKTLLRAIHLAPSNYLLRFNVGVSMQKFSASTLQKAKQTVDEVRATVTELQNAIRVFS 835

Query: 828 HLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEAARQAALAE 887
            LS AS  H HGFDE+KI THVEYCKHLL+AAK+HR+AAE+ EQQN+Q+ E ARQ ALAE
Sbjct: 836 LLSVASTYHSHGFDERKIETHVEYCKHLLNAAKVHRDAAEQAEQQNKQKMEVARQIALAE 895

Query: 888 EARRKAEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVK 924
           EARR+AEEQ+K+ LE+R+ EDE K+++QQEEHF+RVK
Sbjct: 896 EARRRAEEQRKFQLERRREEDELKQVKQQEEHFERVK 932


>gi|222637020|gb|EEE67152.1| hypothetical protein OsJ_24219 [Oryza sativa Japonica Group]
          Length = 1053

 Score = 1282 bits (3318), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 619/948 (65%), Positives = 755/948 (79%), Gaps = 56/948 (5%)

Query: 1   MACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFR 60
           MA VYIPVQ +EEEVRVALDQLP DASDILDILKAEQAPL LWLIIAREYFKQGK+EQFR
Sbjct: 1   MASVYIPVQGTEEEVRVALDQLPADASDILDILKAEQAPLHLWLIIAREYFKQGKIEQFR 60

Query: 61  QILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKA 120
           QILEEGS PEIDEYYADV+YERIAILNALG ++T+LGK+E  Q +KE HF  ATQ YN+A
Sbjct: 61  QILEEGSGPEIDEYYADVKYERIAILNALGAFHTFLGKVERAQ-QKEVHFKEATQCYNRA 119

Query: 121 SRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSD 180
           SRID  EPSTW+G+GQL + K +++ AS +FKIVL+ D  N PALLGQA V F  G   D
Sbjct: 120 SRIDETEPSTWIGRGQLCVVKHDLQMASDSFKIVLDEDGSNFPALLGQASVYFLMG---D 176

Query: 181 SLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVM 240
           S + +K+AL  + +          L  YKL                DPEN++ALVALA+M
Sbjct: 177 SEQQHKKALDYYRNS---------LDLYKL----------------DPENIDALVALAIM 211

Query: 241 DLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 300
           DLQ NEA GIR+GMEKM+RAFEIYPYC +ALN+LANH+FFTGQHF+VEQLTETAL+ +NH
Sbjct: 212 DLQTNEAGGIRRGMEKMRRAFEIYPYCTLALNHLANHYFFTGQHFVVEQLTETALSSSNH 271

Query: 301 GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRS 360
           G  KSH++YNLARSYHSKGD E AG YYMASV EI+KP +F+ P++GLGQ+QLK  D++S
Sbjct: 272 GLLKSHAFYNLARSYHSKGDIETAGRYYMASVNEISKPQDFVLPFFGLGQIQLKFADYKS 331

Query: 361 ALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 420
           +L +FEKVLE++P+NCE+LKA+GHIY + G+ +KA E  +K  +IDP+D QAF++LGELL
Sbjct: 332 SLASFEKVLEVHPENCESLKAIGHIYAKSGENDKAIETFKKVTRIDPKDHQAFMELGELL 391

Query: 421 ISSDTGAALDAFKT-----------------------ARTLLKKAGEEVPIEVLNNIGVI 457
           + SD   A++  KT                       AR LLKKAGE++PIE+LN IG++
Sbjct: 392 VQSDWATAMEYLKTVRLFTSLEVYSVSLYQILPWISQARNLLKKAGEKIPIELLNGIGLL 451

Query: 458 HFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNH 517
           HFEKGE E A QSFK+ALGDG W++++D    + V++ S   +Q++D   F + E +G  
Sbjct: 452 HFEKGELEMAEQSFKEALGDGFWVSIIDGSVGSSVVNWS---IQYRDQSFFQQLEEEGTP 508

Query: 518 VELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQL 577
           +ELPW+KVT LFN ARL E++HDTV AS+ YRLI+FKY DY+D YLRLAAIAK +NNLQL
Sbjct: 509 LELPWDKVTTLFNYARLFEELHDTVKASLFYRLIIFKYPDYIDTYLRLAAIAKEKNNLQL 568

Query: 578 SIELVNEALKVNGKYPNALSMLGDLELKNDD-WVKAKETFRAASDATDGKDSYATLSLGN 636
           SIEL+ +ALK++ KYPNALSMLG LEL+ D+ W+ AKE FR A DA++GKD+Y+ L LGN
Sbjct: 569 SIELIGDALKIDDKYPNALSMLGSLELQGDETWLTAKEHFREAKDASEGKDTYSMLQLGN 628

Query: 637 WNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKD 696
           WNYFAA R EK+APK EATH EKAKELY+ V+ QH  N++AANG G++ AEK Q+D++K+
Sbjct: 629 WNYFAANRPEKKAPKFEATHREKAKELYSNVLKQHHGNMFAANGIGILYAEKAQWDIAKE 688

Query: 697 LFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYL 756
           LFTQV EAASGS+FVQMPDVWINLAH+YFAQG F  A+KMYQNCLRKF+YNTDA ILLYL
Sbjct: 689 LFTQVHEAASGSIFVQMPDVWINLAHIYFAQGFFQQAVKMYQNCLRKFFYNTDATILLYL 748

Query: 757 ARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTV 816
           ARTHYEAEQWQDC+K+LLRAIHLAPSNY LRF+ GV+MQKFSASTLQKT+RT DEVR+TV
Sbjct: 749 ARTHYEAEQWQDCRKTLLRAIHLAPSNYLLRFNVGVSMQKFSASTLQKTKRTVDEVRATV 808

Query: 817 AELENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQR 876
           +EL+NA+RVFS LS AS  H HGFDE+KI TH+EYCKHLLDAAK+HR+AAE+ EQQN+Q+
Sbjct: 809 SELQNAIRVFSLLSVASTYHSHGFDERKIETHIEYCKHLLDAAKVHRDAAEQAEQQNKQK 868

Query: 877 QEAARQAALAEEARRKAEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVK 924
            E ARQ ALA+EARRKAEEQ+K  LE+RK EDE K++ QQE+HF+RVK
Sbjct: 869 MEVARQIALADEARRKAEEQRKAQLERRKQEDELKQVMQQEQHFERVK 916


>gi|302785157|ref|XP_002974350.1| hypothetical protein SELMODRAFT_149863 [Selaginella moellendorffii]
 gi|300157948|gb|EFJ24572.1| hypothetical protein SELMODRAFT_149863 [Selaginella moellendorffii]
          Length = 1041

 Score = 1282 bits (3318), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 604/924 (65%), Positives = 753/924 (81%), Gaps = 6/924 (0%)

Query: 1   MACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFR 60
           M CVYIPVQNS+EEVRV LDQLPRD +DI+DILKAEQAPL LWL  AREYFKQ KV++F 
Sbjct: 1   MECVYIPVQNSQEEVRVGLDQLPRDPADIVDILKAEQAPLHLWLTFAREYFKQDKVKEFL 60

Query: 61  QILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKA 120
           QILEEGSSPEIDEYY+DV+Y+RIAILNALG YYT LGKIE KQR+  EHFI AT YYNKA
Sbjct: 61  QILEEGSSPEIDEYYSDVKYDRIAILNALGAYYTNLGKIEFKQRD--EHFIRATHYYNKA 118

Query: 121 SRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSD 180
           +RID  EP+TW GKGQLLLAKG+ EQ    FKIVL+   DN+ ALLGQAC +FNRGR+ +
Sbjct: 119 TRIDYDEPTTWAGKGQLLLAKGDYEQMFDVFKIVLDVRPDNLLALLGQACAQFNRGRFQE 178

Query: 181 SLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVM 240
           SL  YKR LQ+HP CP ++RLG+G CRY+LGQL KARQAFQR LQLDPEN++ALVAL +M
Sbjct: 179 SLGLYKRVLQMHPGCPASVRLGLGFCRYRLGQLSKARQAFQRVLQLDPENLDALVALGIM 238

Query: 241 DLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 300
           D+ AN+A  +++G +KM  AFEIYPYCA ALN+LANH+F+T QH +VEQL ETALA T++
Sbjct: 239 DINANDAESVQEGTKKMLEAFEIYPYCATALNHLANHYFYTEQHGVVEQLMETALASTDN 298

Query: 301 GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRS 360
              KS SY+NLARSYHSKGDY+KA  YY ASV+E+  P +FI PYYGLGQVQLKL D +S
Sbjct: 299 ALIKSQSYFNLARSYHSKGDYDKAAAYYRASVQELKSPKDFILPYYGLGQVQLKLNDLKS 358

Query: 361 ALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 420
           AL+NFEKVL+++P+NCETLK +G+I++Q G+ +KA E  RKAAK+ PRD  A+I++GELL
Sbjct: 359 ALSNFEKVLDVHPENCETLKVVGYIHLQQGRNDKALESFRKAAKVSPRDVDAWIEIGELL 418

Query: 421 ISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIW 480
           +S+D  AALDAFKTA  L  K+GE+VP+ +LNNIGV+HFE+GE++ A  ++ +ALG+G W
Sbjct: 419 VSTDFSAALDAFKTAHNLQTKSGEKVPLGLLNNIGVLHFERGEYKLAEGAYYEALGEGPW 478

Query: 481 LTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHD 540
               ++   T +      + +F    +F R E  G  +++P  KVTVLFNLARL EQ+H+
Sbjct: 479 KEFNENNFST-ITGGDGPLEKF---DVFQRIEEQGTSLDIPAEKVTVLFNLARLFEQLHE 534

Query: 541 TVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLG 600
           T  A++LY+LILFK+  YVDAYLRLAA+A+ARNNL LS+ELV + LK +    + LS  G
Sbjct: 535 TEKANLLYQLILFKHPSYVDAYLRLAAMAEARNNLSLSMELVQKGLKEDDNDVDILSFRG 594

Query: 601 DLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKA 660
            LELK D+W+KAK+T +     +DGKDS++ L+LGNWNYFAA R+EKR PKLEATHLEKA
Sbjct: 595 SLELKADEWLKAKDTLKGIQSVSDGKDSFSNLALGNWNYFAATRSEKRDPKLEATHLEKA 654

Query: 661 KELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINL 720
           +ELY +V+ Q ++N+YAANG G+V +EKG FD++KD+FTQVQEAASG+V V+MPDVW+NL
Sbjct: 655 RELYQKVLTQKSNNMYAANGLGIVFSEKGMFDIAKDIFTQVQEAASGNVAVEMPDVWVNL 714

Query: 721 AHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLA 780
           AHVY AQG+F LA+KMYQNCLR+FY+NT+  ILLYLARTHYEAEQWQ+CK+ L+ AIH+A
Sbjct: 715 AHVYLAQGHFGLAVKMYQNCLRRFYFNTETNILLYLARTHYEAEQWQECKRVLMHAIHMA 774

Query: 781 PSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGF 840
           PSNY LRFDA + MQKFS +TLQK +RTADEVR +VAE++NAVR+F+ LS  S+ H+HGF
Sbjct: 775 PSNYMLRFDAAITMQKFSTATLQKQKRTADEVRQSVAEVKNAVRLFTQLSLISSHHMHGF 834

Query: 841 DEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEAARQAALAEEARRKAEEQKKYL 900
           DEKKI  HV+YCKHLLDAAK+H EAAEREEQQNRQ+QE ARQ A+A+EA+RKA+E++K  
Sbjct: 835 DEKKIGMHVDYCKHLLDAAKLHLEAAEREEQQNRQKQEVARQLAMAQEAQRKADEERKLQ 894

Query: 901 LEKRKLEDEQKRLRQQEEHFQRVK 924
           +EKRK E+E +R+ +QE HFQRVK
Sbjct: 895 IEKRKREEEHRRVMEQELHFQRVK 918


>gi|17979432|gb|AAL49858.1| putative TPR repeat nuclear phosphoprotein [Arabidopsis thaliana]
          Length = 740

 Score = 1242 bits (3214), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 586/737 (79%), Positives = 660/737 (89%), Gaps = 3/737 (0%)

Query: 1   MACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFR 60
           MA VYIPVQNSEEEVRV LDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGK+EQFR
Sbjct: 1   MASVYIPVQNSEEEVRVVLDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKIEQFR 60

Query: 61  QILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKA 120
           QILEEGSS +IDEYYADV+YERIAILNALG YY+YLGK ETK REKEE FI AT+YYNKA
Sbjct: 61  QILEEGSSSDIDEYYADVKYERIAILNALGAYYSYLGKTETKNREKEEQFISATRYYNKA 120

Query: 121 SRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSD 180
           SRIDMHEPSTWVGKGQLLLAKGE++ A  AFKIVL+   DNVPALLGQA VEFNRGR+S+
Sbjct: 121 SRIDMHEPSTWVGKGQLLLAKGEIDNALQAFKIVLDTAPDNVPALLGQASVEFNRGRFSE 180

Query: 181 SLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVM 240
           SL+ YKRALQV P CP A+RLGIGLCRYKLGQL KARQAF R LQLDP+NVEALVAL +M
Sbjct: 181 SLQLYKRALQVFPGCPAAVRLGIGLCRYKLGQLDKARQAFDRVLQLDPDNVEALVALGIM 240

Query: 241 DLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 300
           DLQAN++ G+RKGM++MQ+AFEIYPYCA ALNYLANHFFFTGQHFLVEQLTETALAVT H
Sbjct: 241 DLQANDSIGMRKGMDRMQQAFEIYPYCASALNYLANHFFFTGQHFLVEQLTETALAVTTH 300

Query: 301 GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEI-NKPHEFIFPYYGLGQVQLKLGDFR 359
           GPTKSHS+YNLARSYHSKGD+EKAG+YYMA++KE  N PHEF+FPY+GLGQVQLKLG+ +
Sbjct: 301 GPTKSHSFYNLARSYHSKGDFEKAGMYYMAAIKETNNNPHEFVFPYFGLGQVQLKLGELK 360

Query: 360 SALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGEL 419
            ++ NFEKVLE+YPDNCETLKALGH+Y QLGQ EKA E +RKA K+DPRDAQAF+ LGEL
Sbjct: 361 GSVFNFEKVLEVYPDNCETLKALGHLYTQLGQNEKALEYMRKATKLDPRDAQAFVGLGEL 420

Query: 420 LISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGI 479
           LISSDTGAALDAFK ARTL+KK G+EVPIEVLN+IG +HFE+ EFESA ++FK+ALGDGI
Sbjct: 421 LISSDTGAALDAFKMARTLMKKGGQEVPIEVLNDIGALHFEREEFESALENFKEALGDGI 480

Query: 480 WLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIH 539
           W++ LD K    +     S+L +KD  +FHR    G+ V++PWNKVT LFNLARLLEQIH
Sbjct: 481 WISFLDEKEN--LEQTGVSVLGYKDTGIFHRLIESGHSVDVPWNKVTTLFNLARLLEQIH 538

Query: 540 DTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSML 599
            T AA+ +YRLILFKY  Y+DAYLRLAA AKA+NNL L+IELVNEALKV+ K PNALS+L
Sbjct: 539 KTEAATFMYRLILFKYPGYIDAYLRLAASAKAQNNLPLAIELVNEALKVDDKNPNALSLL 598

Query: 600 GDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEK 659
           G+LELKNDDWVKAKETFRAA+DATDGKDSYA LSLGNWNYFAA+RNEKR PKLEATHLEK
Sbjct: 599 GELELKNDDWVKAKETFRAANDATDGKDSYAILSLGNWNYFAAMRNEKRNPKLEATHLEK 658

Query: 660 AKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWIN 719
           AKELYT+V+ QH SN+YAANG+G+VLAEKGQFD++KD+FTQVQEAASGSVF+QMPDVW+N
Sbjct: 659 AKELYTKVLTQHNSNMYAANGSGIVLAEKGQFDIAKDVFTQVQEAASGSVFLQMPDVWVN 718

Query: 720 LAHVYFAQGNFALAMKM 736
           LAHVYFAQGNFAL +KM
Sbjct: 719 LAHVYFAQGNFALTVKM 735


>gi|302818335|ref|XP_002990841.1| hypothetical protein SELMODRAFT_161156 [Selaginella moellendorffii]
 gi|300141402|gb|EFJ08114.1| hypothetical protein SELMODRAFT_161156 [Selaginella moellendorffii]
          Length = 973

 Score = 1220 bits (3156), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 586/941 (62%), Positives = 735/941 (78%), Gaps = 37/941 (3%)

Query: 1   MACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFR 60
           M CVYIPVQNS+EEVRV LDQLPRD +DI+DILKAEQAPL LWL  AREYFKQ KV++F 
Sbjct: 1   MECVYIPVQNSQEEVRVGLDQLPRDPADIVDILKAEQAPLHLWLTFAREYFKQDKVKEFL 60

Query: 61  QILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKA 120
           QILEEGSSPEIDEYY+DV+Y+RIAILNALG YYT LGKIE KQR  +EHFI AT YYNKA
Sbjct: 61  QILEEGSSPEIDEYYSDVKYDRIAILNALGAYYTNLGKIEFKQR--DEHFIRATHYYNKA 118

Query: 121 SRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSD 180
           +RID  EP+TW GKGQLLLAKG+ EQ    FKIVL+   DN+ ALLGQAC +FNRGR+ +
Sbjct: 119 TRIDYDEPTTWAGKGQLLLAKGDYEQMFDVFKIVLDVRPDNLLALLGQACAQFNRGRFQE 178

Query: 181 SLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVM 240
           SL  YKR LQ+HP CP +                           LDPEN++ALVAL +M
Sbjct: 179 SLGLYKRVLQMHPGCPAS---------------------------LDPENLDALVALGIM 211

Query: 241 DLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 300
           D+ AN+A  +++G +KM  AFEIYPYCA ALN+LANH+F+T QH +VEQL ETALA T++
Sbjct: 212 DINANDAESVQEGTKKMLEAFEIYPYCATALNHLANHYFYTEQHGVVEQLMETALASTDN 271

Query: 301 GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRS 360
              KS SY+NLARSYHSKGDY+KA  YY ASV+E+  P +FI PYYGLGQVQLKL D +S
Sbjct: 272 ALIKSQSYFNLARSYHSKGDYDKAAAYYRASVQELKSPKDFILPYYGLGQVQLKLNDLKS 331

Query: 361 ALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 420
           AL+NFEKVL+++P+NCETLK +G+I++Q G+ +KA E  RKAAK+ PRD  A+I++GELL
Sbjct: 332 ALSNFEKVLDVHPENCETLKVVGYIHLQQGRNDKALESFRKAAKVSPRDVDAWIEIGELL 391

Query: 421 ISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIW 480
           +S+D  AALDAFKTA  L  K+GE+VP+ +LNNIGV+HFE+GE++ A  ++ +ALG+G W
Sbjct: 392 VSTDFSAALDAFKTAHNLQTKSGEKVPLGLLNNIGVLHFERGEYKLAEGAYYEALGEGPW 451

Query: 481 LTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHD 540
               ++   T +      + +F    +F R E  G  +++P  KVTVLFNLARL EQ+H+
Sbjct: 452 KEFNENNFST-ITGGDGPLEKF---DVFQRIEEQGTSLDIPAEKVTVLFNLARLFEQLHE 507

Query: 541 TVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLG 600
           T  A++LY+LILFK+  YVDAYLRLAA+A+ARNNL LS+ELV + LK +    + LS  G
Sbjct: 508 TEKANLLYQLILFKHPSYVDAYLRLAAMAEARNNLSLSMELVQKGLKEDDNDVDILSFRG 567

Query: 601 DLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKA 660
            LELK D+W+KAK+T +     +DGKDS++ L+LGNWNYFAA R+EKR PKLEATHLEKA
Sbjct: 568 SLELKADEWLKAKDTLKGIQSVSDGKDSFSNLALGNWNYFAATRSEKRDPKLEATHLEKA 627

Query: 661 KELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINL 720
           +ELY +V+ Q ++N+YAANG G+V +EKG FD++KD+FTQVQEAASG+V V+MPDVW+NL
Sbjct: 628 RELYQKVLTQKSNNMYAANGLGIVFSEKGMFDIAKDIFTQVQEAASGNVAVEMPDVWVNL 687

Query: 721 AHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLA 780
           AHVY AQG+F LA+KMYQNCLR+FY+NT+  ILLYLARTHYEAEQWQ+CK+ L+ AIH+A
Sbjct: 688 AHVYLAQGHFGLAVKMYQNCLRRFYFNTETNILLYLARTHYEAEQWQECKRVLMHAIHMA 747

Query: 781 PSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGF 840
           PSNY LRFDA + MQKFS +TLQK +RTADEVR +VAE++NAVR+F+ LS  S+ H+HGF
Sbjct: 748 PSNYMLRFDAAITMQKFSTATLQKQKRTADEVRQSVAEVKNAVRLFTQLSLISSHHMHGF 807

Query: 841 DEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEAARQAALAEEARRKAEEQKKYL 900
           DEKKI  HV+YCKHLLDAAK+H EAAEREEQQNRQ+QE ARQ A+A+EA+RKA+E++K  
Sbjct: 808 DEKKIGMHVDYCKHLLDAAKLHLEAAEREEQQNRQKQEVARQLAMAQEAQRKADEERKLQ 867

Query: 901 LEKRKLEDEQKRLRQQEEHFQRVKARIFYICSIKIFKFDCS 941
           +EKRK E+E +R+ +QE HFQRVK    +    + F+  CS
Sbjct: 868 IEKRKREEEHRRVMEQELHFQRVKVSKHF----RAFETKCS 904


>gi|168008775|ref|XP_001757082.1| Paf1 complex protein [Physcomitrella patens subsp. patens]
 gi|162691953|gb|EDQ78313.1| Paf1 complex protein [Physcomitrella patens subsp. patens]
          Length = 999

 Score = 1200 bits (3104), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 579/925 (62%), Positives = 722/925 (78%), Gaps = 27/925 (2%)

Query: 1   MACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFR 60
           MACVYIPVQN+ EEVRVAL++LP DA+DILDILKAEQAPL+LWL  AREYFKQGKV +F 
Sbjct: 1   MACVYIPVQNTSEEVRVALERLPADATDILDILKAEQAPLNLWLTFAREYFKQGKVAEFL 60

Query: 61  QILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKA 120
           QILEEGSSPEIDEYY+DV+Y+RIAILNALG YYT LG++E+KQREK+EHFI ATQYYNKA
Sbjct: 61  QILEEGSSPEIDEYYSDVKYDRIAILNALGAYYTNLGRVESKQREKDEHFIRATQYYNKA 120

Query: 121 SRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSD 180
           SRID  E STWVGKGQLL+AKGE+EQA   FKIVL+  RDNV ALLGQACV+FN GR+ +
Sbjct: 121 SRIDQDEASTWVGKGQLLVAKGELEQAQEVFKIVLDGQRDNVAALLGQACVQFNSGRFQE 180

Query: 181 SLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVM 240
           +L+ YK+ALQ+HP CP +                    AF R LQLD  NVEALV   ++
Sbjct: 181 ALKLYKKALQIHPQCPAS--------------------AFDRVLQLDGNNVEALVGSGII 220

Query: 241 DLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 300
           DL + +   ++ G+EKM  AFEIYPYC+MALN+LA H+FF  QH +VEQLTE ALA T+H
Sbjct: 221 DLNSGDENRVQAGLEKMLAAFEIYPYCSMALNHLACHYFFLDQHPMVEQLTEAALAATDH 280

Query: 301 GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRS 360
              K+ SYYNLARSYH++ DY+ A  YY AS  E+  P +FI PYYGLGQV LKLGD+++
Sbjct: 281 VLIKAQSYYNLARSYHTREDYDMAARYYRASTAELKNPKDFILPYYGLGQVHLKLGDWKA 340

Query: 361 ALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 420
           AL +FEKVLE+YPDNCETLKA+GHI    G+ EKA E  +KA +++P+D  A++++GELL
Sbjct: 341 ALASFEKVLELYPDNCETLKAVGHILGHQGRKEKALEHFKKATRMNPKDVDAWLEMGELL 400

Query: 421 ISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIW 480
           +SSD  AALD+F+TA TLLK++ E VP+ +LNNIGV+HFEK E ESA +++K ALG+GIW
Sbjct: 401 VSSDFAAALDSFQTAHTLLKRSQEVVPLALLNNIGVLHFEKDELESARKAYKQALGEGIW 460

Query: 481 LTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHD 540
               +       +D S      +D +LF   E+ G  +++P  KVTVLFNLARL EQ+H+
Sbjct: 461 TEYSEGHRS---VDVSP----IEDNELFRSLEDKGISLDIPAEKVTVLFNLARLHEQLHE 513

Query: 541 TVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLG 600
           T  ASVLYRLIL+K+ +Y DAYLRL A++ AR+N+  S+ELVN+AL+ N K   ALS+ G
Sbjct: 514 TGKASVLYRLILYKHPEYEDAYLRLGALSLARSNISTSLELVNKALEANDKNVEALSVRG 573

Query: 601 DLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKA 660
           +LE+K DDW+KAK+TF++  +  DG D+YA L+LGNWNY+AA R EK+ PKLEATHLEKA
Sbjct: 574 NLEVKTDDWLKAKDTFKSILEIKDGNDNYAMLALGNWNYYAATRGEKKVPKLEATHLEKA 633

Query: 661 KELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINL 720
           ++LY +V+    +N+YAANG GVVLAEKG FD+SKD+FTQVQEAA+G++ V MPDVWINL
Sbjct: 634 RDLYQKVLGLQINNMYAANGIGVVLAEKGLFDISKDIFTQVQEAATGNLAVDMPDVWINL 693

Query: 721 AHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLA 780
            H+Y AQG F LA+KMY NCL++FY+NTD QILLYLAR HYEAEQWQ+CK+ LLRAIHLA
Sbjct: 694 GHIYLAQGQFGLAVKMYLNCLKRFYHNTDHQILLYLARCHYEAEQWQECKRVLLRAIHLA 753

Query: 781 PSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGF 840
           PSNY LRFD  +AMQKFS +TLQK +RTADEVR  V EL+NA+R+F  L+   +  +HGF
Sbjct: 754 PSNYMLRFDVAIAMQKFSTATLQKAKRTADEVRQAVFELKNALRLFGQLAGVKDKQVHGF 813

Query: 841 DEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEAARQAALAEEARRKAEEQKKYL 900
           DEKK++ H EYCKHLLDAAK+H EAAEREEQQ RQ+QE ARQ A+A+EARRKAEE+++  
Sbjct: 814 DEKKLDMHGEYCKHLLDAAKVHLEAAEREEQQLRQKQEVARQLAMAQEARRKAEEERRLQ 873

Query: 901 LEKRKLEDEQKRLRQQEEHFQRVKA 925
           LEKR+ + EQ+   Q E+  Q+ KA
Sbjct: 874 LEKRRRDAEQRIALQLEDKLQQTKA 898


>gi|414585833|tpg|DAA36404.1| TPA: hypothetical protein ZEAMMB73_637393 [Zea mays]
          Length = 892

 Score = 1059 bits (2738), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 513/749 (68%), Positives = 634/749 (84%), Gaps = 8/749 (1%)

Query: 178 YSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVAL 237
           Y +SL+ YK+AL+V+ +CP A+RLGI  CRYKLGQ+ KARQAFQR L+LDP+NV+ALVAL
Sbjct: 15  YRNSLDLYKKALRVYCNCPAAVRLGIAFCRYKLGQVEKARQAFQRVLELDPQNVDALVAL 74

Query: 238 AVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAV 297
           A+MDLQ NEA GIR+GMEKM++AFEIYPY  +ALN+LANH+FFTGQHF+VEQLTETAL+ 
Sbjct: 75  AIMDLQTNEAGGIRRGMEKMKKAFEIYPYYTLALNHLANHYFFTGQHFVVEQLTETALSS 134

Query: 298 TNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGD 357
           +NHG  KSH+YYNLARSYHSKGD E AG YYMASV EI+KP +F+ PY GLGQ+QLK GD
Sbjct: 135 SNHGLLKSHAYYNLARSYHSKGDIETAGRYYMASVNEISKPQDFVLPYIGLGQIQLKFGD 194

Query: 358 FRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 417
           F+S+L +FEKVLE++P+NCE+LKA+GHI+ + G+ EKA E  +K  +IDP+D QAF++LG
Sbjct: 195 FKSSLGSFEKVLEVHPENCESLKAIGHIHAKSGETEKAIETFKKVTRIDPKDHQAFVELG 254

Query: 418 ELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGD 477
           ELL+ SD  AA++  KTAR LLKKAGE VP+E+LN IG++HFEKGEFE A QSFK+ALGD
Sbjct: 255 ELLVESDWAAAMEYLKTARNLLKKAGEAVPVELLNGIGLLHFEKGEFEMAEQSFKEALGD 314

Query: 478 GIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQ 537
           G+W++++D K  + +I+ S   +Q KD   FH+ E  G  +EL  NKVT LFN ARLLE+
Sbjct: 315 GLWVSIMDGKVGSSMINWS---VQNKDQSFFHQLE--GVPLELHSNKVTTLFNYARLLEE 369

Query: 538 IHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALS 597
           +HD+V AS+ YR I+FKY DY+DAYLRLAAIAK RNN+QLSIEL+ +ALK++ K PNALS
Sbjct: 370 LHDSVRASIFYRFIIFKYPDYIDAYLRLAAIAKQRNNVQLSIELIGDALKIDEKNPNALS 429

Query: 598 MLGDLELKNDD-WVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATH 656
           MLG LEL++D+ W+ AKE FR A +AT G D+Y+ L LGNWNYFAA R EK+APK+EATH
Sbjct: 430 MLGSLELQSDEAWLTAKEHFRNAKEATKG-DTYSLLQLGNWNYFAANRPEKKAPKIEATH 488

Query: 657 LEKAKELY-TRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPD 715
            EKA ELY T+V+ QH SN++AANG G++ AEK ++DV+K+LFTQV EAASGS+FV MPD
Sbjct: 489 REKAMELYQTQVLKQHRSNMFAANGIGILYAEKAKWDVAKELFTQVHEAASGSIFVHMPD 548

Query: 716 VWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLR 775
           VWINLAH YFAQG+F  A+K+YQNCLRKF++NTDA ILLYLARTHYEAE+WQDC+K+LLR
Sbjct: 549 VWINLAHTYFAQGHFQQAVKLYQNCLRKFFHNTDATILLYLARTHYEAERWQDCRKTLLR 608

Query: 776 AIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASNL 835
           AIHLAPSNY LRF+ GV+MQKFSASTLQKT++T DEVR+TV EL+NA+RVFS LS AS  
Sbjct: 609 AIHLAPSNYLLRFNVGVSMQKFSASTLQKTKQTVDEVRATVTELQNAIRVFSLLSVASTY 668

Query: 836 HLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEAARQAALAEEARRKAEE 895
           H HGFDE+KI THVEYCKHLLDAAK+HR+AAE+ EQQN+Q+ E ARQ ALAEEARR+AEE
Sbjct: 669 HSHGFDERKIETHVEYCKHLLDAAKVHRDAAEQAEQQNKQKMEVARQIALAEEARRRAEE 728

Query: 896 QKKYLLEKRKLEDEQKRLRQQEEHFQRVK 924
           Q+K+ LE+R+ EDE K+++QQEEHFQRVK
Sbjct: 729 QRKFQLERRREEDELKQVKQQEEHFQRVK 757



 Score = 41.6 bits (96), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 52/102 (50%), Gaps = 4/102 (3%)

Query: 96  LGKIETKQREKEEHFILATQYYNKASRIDMHEPS-TWVGKGQLLLAKGEVEQASSAFKIV 154
           +G+ E + ++  EH+  +   Y KA R+  + P+   +G        G+VE+A  AF+ V
Sbjct: 1   MGEAEQQHKKSLEHYRNSLDLYKKALRVYCNCPAAVRLGIAFCRYKLGQVEKARQAFQRV 60

Query: 155 LEADRDNVPALLGQACVEFNR---GRYSDSLEFYKRALQVHP 193
           LE D  NV AL+  A ++      G     +E  K+A +++P
Sbjct: 61  LELDPQNVDALVALAIMDLQTNEAGGIRRGMEKMKKAFEIYP 102


>gi|218199588|gb|EEC82015.1| hypothetical protein OsI_25970 [Oryza sativa Indica Group]
          Length = 1174

 Score = 1032 bits (2668), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 493/784 (62%), Positives = 619/784 (78%), Gaps = 42/784 (5%)

Query: 178  YSDSLEFYKRALQVHPSCPGAIRLGIG-LCRYKLGQLGKARQAFQRAL------------ 224
            + ++ + Y RA ++  + P +  +G G LC  K   L  A  +F+  L            
Sbjct: 259  FKEATQCYNRASRIDETEP-STWIGRGQLCVVK-HDLQMASDSFKIVLDEDGSNFPALLG 316

Query: 225  QLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQH 284
            QLDPEN++ALVALA+MDLQ NEA GIR+GMEKM+RAFEIYPYC +ALN+LANH+FFTGQH
Sbjct: 317  QLDPENIDALVALAIMDLQTNEAGGIRRGMEKMRRAFEIYPYCTLALNHLANHYFFTGQH 376

Query: 285  FLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFP 344
            F+VEQLTETAL+ +NHG  KSH++YNLARSYHSKGD E AG YYMASV EI+KP +F+ P
Sbjct: 377  FVVEQLTETALSSSNHGLLKSHAFYNLARSYHSKGDIETAGRYYMASVNEISKPQDFVLP 436

Query: 345  YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAK 404
            ++GLGQ+QLK  D++S+L +FEKVLE++P+NCE+LKA+GHIY + G+ +KA E  +K  +
Sbjct: 437  FFGLGQIQLKFADYKSSLASFEKVLEVHPENCESLKAIGHIYAKSGENDKAIETFKKVTR 496

Query: 405  IDPRDAQAFIDLGELLISSDTGAALDAFKT-----------------------ARTLLKK 441
            IDP+D QAF++LGELL+ SD   A++  KT                       AR LLKK
Sbjct: 497  IDPKDHQAFMELGELLVQSDWATAMEYLKTVRLFTSLEVYSVSLYQILPWISQARNLLKK 556

Query: 442  AGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQ 501
            +GE++PIE+LN IG++HFEKGE E A QSFK+ALGDG W++++D    + V++ S   +Q
Sbjct: 557  SGEKIPIELLNGIGLLHFEKGELEMAEQSFKEALGDGFWVSIIDGSVGSSVVNWS---IQ 613

Query: 502  FKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDA 561
            ++D   F + E +G  +ELPW+KVT LFN ARL E++HDTV AS+ YRLI+FKY DY+D 
Sbjct: 614  YRDQSFFQQLEEEGTPLELPWDKVTTLFNYARLFEELHDTVKASLFYRLIIFKYPDYIDT 673

Query: 562  YLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDD-WVKAKETFRAAS 620
            YLRLAAIAK +NNLQLSIEL+ +ALK++ KYPNALSMLG LEL+ D+ W+ AKE FR A 
Sbjct: 674  YLRLAAIAKEKNNLQLSIELIGDALKIDDKYPNALSMLGSLELQGDETWLTAKEHFREAK 733

Query: 621  DATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANG 680
            DA++GKD+Y+ L LGNWNYFAA R EK+APK EATH EKAKELY+ V+ QH  N++AANG
Sbjct: 734  DASEGKDTYSMLQLGNWNYFAANRPEKKAPKFEATHREKAKELYSNVLKQHRGNMFAANG 793

Query: 681  AGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNC 740
             G++ AEK Q+D++K+LFTQV EAASGS+FVQMPDVWINLAH+YFAQG F  A+KMYQNC
Sbjct: 794  IGILYAEKAQWDIAKELFTQVHEAASGSIFVQMPDVWINLAHIYFAQGFFQQAVKMYQNC 853

Query: 741  LRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSAS 800
            LRKF+YNTDA ILLYLARTHYEAEQWQDC+K+LLRAIHLAPSNY LRF+ GV+MQKFSAS
Sbjct: 854  LRKFFYNTDATILLYLARTHYEAEQWQDCRKTLLRAIHLAPSNYLLRFNVGVSMQKFSAS 913

Query: 801  TLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAK 860
            TLQKT+RT DEVR+TV+EL+NA+RVFS LS AS  H HGFDE+KI TH+EYCKHLLDAAK
Sbjct: 914  TLQKTKRTVDEVRATVSELQNAIRVFSLLSVASTYHSHGFDERKIETHIEYCKHLLDAAK 973

Query: 861  IHREAAEREEQQNRQRQEAARQAALAEEARRKAEEQKKYLLEKRKLEDEQKRLRQQEEHF 920
            +HR+AAE+ EQQN+Q+ E ARQ ALA+EARRKAEEQ+K  LE+RK EDE K++ QQE+HF
Sbjct: 974  VHRDAAEQAEQQNKQKMEVARQIALADEARRKAEEQRKAQLERRKQEDELKQVMQQEQHF 1033

Query: 921  QRVK 924
            +RVK
Sbjct: 1034 ERVK 1037



 Score =  246 bits (629), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 126/204 (61%), Positives = 152/204 (74%), Gaps = 16/204 (7%)

Query: 11  SEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQILEEGSSPE 70
           +EEEVRVALDQLP DASDILDILKAEQAPL LWLIIAREYFKQGK++QFRQILEEGS PE
Sbjct: 161 TEEEVRVALDQLPADASDILDILKAEQAPLHLWLIIAREYFKQGKIDQFRQILEEGSGPE 220

Query: 71  IDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPST 130
           IDEYYADV+YERIAILNALG ++T+LGK+E  Q +KE HF  ATQ YN+ASRID  EPST
Sbjct: 221 IDEYYADVKYERIAILNALGAFHTFLGKVERAQ-QKEVHFKEATQCYNRASRIDETEPST 279

Query: 131 WVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQ------------ACVEFNR--- 175
           W+G+GQL + K +++ AS +FKIVL+ D  N PALLGQ            A ++      
Sbjct: 280 WIGRGQLCVVKHDLQMASDSFKIVLDEDGSNFPALLGQLDPENIDALVALAIMDLQTNEA 339

Query: 176 GRYSDSLEFYKRALQVHPSCPGAI 199
           G     +E  +RA +++P C  A+
Sbjct: 340 GGIRRGMEKMRRAFEIYPYCTLAL 363



 Score = 42.0 bits (97), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 76/318 (23%), Positives = 127/318 (39%), Gaps = 45/318 (14%)

Query: 352 QLKLGDFRSAL--TNFEKVLEIYPD----NCETLKALGHIYVQLGQIEKAQ--------- 396
           Q K+  FR  L   +  ++ E Y D        L ALG  +  LG++E+AQ         
Sbjct: 203 QGKIDQFRQILEEGSGPEIDEYYADVKYERIAILNALGAFHTFLGKVERAQQKEVHFKEA 262

Query: 397 -ELLRKAAKIDPRDAQAFIDLGEL-LISSDTGAALDAFKTARTLLKKAGEEVP------- 447
            +   +A++ID  +   +I  G+L ++  D   A D+FK    +L + G   P       
Sbjct: 263 TQCYNRASRIDETEPSTWIGRGQLCVVKHDLQMASDSFK---IVLDEDGSNFPALLGQLD 319

Query: 448 ---IEVLNNIGVIHF---EKGEFESAHQSFKDALGDGIWLTL-LDSKTKTYVIDASASML 500
              I+ L  + ++     E G      +  + A     + TL L+     Y       ++
Sbjct: 320 PENIDALVALAIMDLQTNEAGGIRRGMEKMRRAFEIYPYCTLALNHLANHYFFTGQHFVV 379

Query: 501 QFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLI---LFKYQD 557
           +    QL     +  NH  L   K    +NLAR      D   A   Y      + K QD
Sbjct: 380 E----QLTETALSSSNHGLL---KSHAFYNLARSYHSKGDIETAGRYYMASVNEISKPQD 432

Query: 558 YVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFR 617
           +V  +  L  I     + + S+    + L+V+ +   +L  +G +  K+ +  KA ETF+
Sbjct: 433 FVLPFFGLGQIQLKFADYKSSLASFEKVLEVHPENCESLKAIGHIYAKSGENDKAIETFK 492

Query: 618 AASDATDGKDSYATLSLG 635
             +   D KD  A + LG
Sbjct: 493 KVT-RIDPKDHQAFMELG 509


>gi|115472053|ref|NP_001059625.1| Os07g0476200 [Oryza sativa Japonica Group]
 gi|113611161|dbj|BAF21539.1| Os07g0476200, partial [Oryza sativa Japonica Group]
          Length = 629

 Score =  726 bits (1875), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 340/491 (69%), Positives = 415/491 (84%), Gaps = 4/491 (0%)

Query: 435 ARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVID 494
           AR LLKKAGE++PIE+LN IG++HFEKGE E A QSFK+ALGDG W++++D    + V++
Sbjct: 5   ARNLLKKAGEKIPIELLNGIGLLHFEKGELEMAEQSFKEALGDGFWVSIIDGSVGSSVVN 64

Query: 495 ASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFK 554
            S   +Q++D   F + E +G  +ELPW+KVT LFN ARL E++HDTV AS+ YRLI+FK
Sbjct: 65  WS---IQYRDQSFFQQLEEEGTPLELPWDKVTTLFNYARLFEELHDTVKASLFYRLIIFK 121

Query: 555 YQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDD-WVKAK 613
           Y DY+D YLRLAAIAK +NNLQLSIEL+ +ALK++ KYPNALSMLG LEL+ D+ W+ AK
Sbjct: 122 YPDYIDTYLRLAAIAKEKNNLQLSIELIGDALKIDDKYPNALSMLGSLELQGDETWLTAK 181

Query: 614 ETFRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTS 673
           E FR A DA++GKD+Y+ L LGNWNYFAA R EK+APK EATH EKAKELY+ V+ QH  
Sbjct: 182 EHFREAKDASEGKDTYSMLQLGNWNYFAANRPEKKAPKFEATHREKAKELYSNVLKQHHG 241

Query: 674 NLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALA 733
           N++AANG G++ AEK Q+D++K+LFTQV EAASGS+FVQMPDVWINLAH+YFAQG F  A
Sbjct: 242 NMFAANGIGILYAEKAQWDIAKELFTQVHEAASGSIFVQMPDVWINLAHIYFAQGFFQQA 301

Query: 734 MKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVA 793
           +KMYQNCLRKF+YNTDA ILLYLARTHYEAEQWQDC+K+LLRAIHLAPSNY LRF+ GV+
Sbjct: 302 VKMYQNCLRKFFYNTDATILLYLARTHYEAEQWQDCRKTLLRAIHLAPSNYLLRFNVGVS 361

Query: 794 MQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCK 853
           MQKFSASTLQKT+RT DEVR+TV+EL+NA+RVFS LS AS  H HGFDE+KI TH+EYCK
Sbjct: 362 MQKFSASTLQKTKRTVDEVRATVSELQNAIRVFSLLSVASTYHSHGFDERKIETHIEYCK 421

Query: 854 HLLDAAKIHREAAEREEQQNRQRQEAARQAALAEEARRKAEEQKKYLLEKRKLEDEQKRL 913
           HLLDAAK+HR+AAE+ EQQN+Q+ E ARQ ALA+EARRKAEEQ+K  LE+RK EDE K++
Sbjct: 422 HLLDAAKVHRDAAEQAEQQNKQKMEVARQIALADEARRKAEEQRKAQLERRKQEDELKQV 481

Query: 914 RQQEEHFQRVK 924
            QQE+HF+RVK
Sbjct: 482 MQQEQHFERVK 492


>gi|440789755|gb|ELR11054.1| tetratricopeptide repeat domain containing protein [Acanthamoeba
           castellanii str. Neff]
          Length = 1211

 Score =  592 bits (1525), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 347/931 (37%), Positives = 547/931 (58%), Gaps = 80/931 (8%)

Query: 3   CVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQI 62
            + IPV  S+E VRV + +LP+DA+DI+DILKAE APLD+WL  A EY+KQG  E F+ I
Sbjct: 41  AILIPVHGSDECVRVNVSELPKDANDIVDILKAELAPLDVWLKFAVEYYKQGMPENFKLI 100

Query: 63  LEEGSSPEIDEY--YAD--VRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYN 118
           L+EGS   ++    Y D   + +RIAILN L  YY  L  +++K  ++++ + LAT  YN
Sbjct: 101 LDEGSDESLEHVPRYMDEESKRQRIAILNVLAGYYIKLA-VKSKDAQRDQFYDLATNNYN 159

Query: 119 KASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRY 178
           KA +ID+ +  TWVGKG LLL KG  ++A   F  VL+ +  N PALLG+AC+ +N+  Y
Sbjct: 160 KADKIDVQQEMTWVGKGVLLLCKGSADRADKYFDTVLDGNAANAPALLGKACIAYNKKNY 219

Query: 179 SDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA 238
            ++  +Y++ L+++PSCPGA+RLG+  C Y+L +L  AR+AF+R L L+P+NV AL ALA
Sbjct: 220 EEAFGYYRKVLELNPSCPGAVRLGLAFCHYRLNRLELARKAFERVLVLEPDNVPALAALA 279

Query: 239 VMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVT 298
           V++L   +   + + M  +++A++  P  +  LN+LANHFF+  ++     L + A   T
Sbjct: 280 VLELNTAKPKAVHRAMSLLKQAYDADPSNSFVLNHLANHFFYKKEYKKTIHLAQAAFNNT 339

Query: 299 NHGPTKSHSYYNLARSYHSKGDYEKA-GLYYMASVKEINKPHEFIFPYYGLGQVQLKLGD 357
                K+ S+++ AR+YH++ DYEKA   YY A+    +   E+   +YGLGQ+ L  G+
Sbjct: 340 TVREIKAESFFHFARAYHAQEDYEKAFTCYYQAT----DMWPEYTLAHYGLGQMYLAKGE 395

Query: 358 FRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 417
              A+ +FE V + YPDN ETLK L  +Y   G+ +KA    R+  +  P+D +A+++LG
Sbjct: 396 TAKAIASFEVVNKKYPDNYETLKILASLYAHTGKRDKAIHHFRRITETHPKDTEAWVELG 455

Query: 418 ELL-ISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALG 476
           +L+    +   AL A++ A TLL+  GE VPIE+ NN+GV+  + G  E A Q+++ AL 
Sbjct: 456 DLVERQKNYTEALKAYEKATTLLQAQGEPVPIELWNNVGVLRHQLGNVEGAEQAYRLALA 515

Query: 477 DGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLE 536
                            ++ A+  +FK +                   +T L+NL RL E
Sbjct: 516 -----------------ESGATEEEFKALD------------------ITTLYNLGRLYE 540

Query: 537 QIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNAL 596
             H +  A+ LY+ IL ++ +YVD YLRL  +A+ + ++  + E   E   +N  +P A 
Sbjct: 541 AQHRSEQAASLYKAILKEHPNYVDCYLRLGCMARDKGHIFEASEWFKETFAINESHPEAW 600

Query: 597 SMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATH 656
            +LG+L L+ ++W   ++            D Y  L+LGN  Y A    + +A K    +
Sbjct: 601 CLLGNLHLQKEEWQPGQKN-----------DPYVLLALGNIFYAAKFDKKDKAEK----Y 645

Query: 657 LEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDV 716
           L+ A + Y RV++++ +N+YAANG G++LAE+ + + +KD F +V+EA +      MPDV
Sbjct: 646 LQHAMDHYWRVLLKNPANMYAANGLGIILAERNELNEAKDFFIKVREATT-----TMPDV 700

Query: 717 WINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRA 776
           W+NL HVY AQG F  A+KMYQNCLRKF+ N D +++L+LA+ ++E    Q+CK+ LL+A
Sbjct: 701 WLNLGHVYLAQGEFVNAIKMYQNCLRKFFGNKDPEVMLFLAKAYFEYGHMQECKQVLLKA 760

Query: 777 IHLAPSNYTLRFDAGVAMQKFSASTLQKTRRT-----ADEVRSTVAELENAVRVFSHLSA 831
           + L+P+N  L F+  ++ + ++   ++K +       A E++S +AEL  A R F+HL+ 
Sbjct: 761 LRLSPNNNQLWFNLALSQEAYARQVVKKEKTEKKSLLAGEMKSALAELRVAERTFTHLAT 820

Query: 832 ASNLHLHG---FDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEAARQAALAE- 887
                 H    F+ K+   H   C+  +   +     AE +E +  +++E+ RQAA  E 
Sbjct: 821 IPAKTPHARLNFNPKQAEKHAAKCRAYVTTLEALVAQAETDETETARKRESQRQAAAEEA 880

Query: 888 EARRKAEEQKKYLLEKRKLEDEQKRLRQQEE 918
           E RRKAE     L   + +EDE+ RL++  E
Sbjct: 881 EKRRKAE-----LERVQAIEDEKARLQRMAE 906


>gi|260827198|ref|XP_002608552.1| hypothetical protein BRAFLDRAFT_236015 [Branchiostoma floridae]
 gi|229293903|gb|EEN64562.1| hypothetical protein BRAFLDRAFT_236015 [Branchiostoma floridae]
          Length = 1183

 Score =  537 bits (1384), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 329/923 (35%), Positives = 516/923 (55%), Gaps = 65/923 (7%)

Query: 2   ACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQ 61
             V IP+++++E + + LDQLP D  ++L+IL+ E   L +W+ +A EY+KQGK + F +
Sbjct: 8   GSVEIPLRDTDEVIELDLDQLP-DGEEVLNILRQENVVLTVWITLALEYYKQGKAQDFVK 66

Query: 62  ILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKAS 121
           ILE  +  + +  Y +   +++  L+ L  YY    + E  +  K+E F  AT  Y  A 
Sbjct: 67  ILE-AARTDANHDYRNHEIDQMKSLDTLAAYYVQQARKEKNKDRKKELFTQATLLYTMAD 125

Query: 122 RIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSD 180
           +I M++ +  +G+    L +G+ ++QA + F  VL    +N+PALLG+AC+ FN+  Y  
Sbjct: 126 KIIMYDQNHLLGRACFCLLEGDKMDQADAQFNFVLNQSPNNIPALLGKACISFNKKDYRG 185

Query: 181 SLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVM 240
           +L +YK+AL+ +P+CP  +RLG+G C  KL +  KAR AFQRAL+L+P+ V ALV LA++
Sbjct: 186 ALAYYKKALRTNPNCPAEVRLGMGHCFMKLSKADKARLAFQRALELNPKCVGALVGLAIL 245

Query: 241 DLQANE-AAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTN 299
           +L + E    I++G++ + +A+ I     M LN+LANHFFF   +  V+ L   A   T 
Sbjct: 246 ELNSKEDKESIKRGVQYLSKAYTIDSTNPMVLNHLANHFFFKKDYNKVQHLALHAFHGTE 305

Query: 300 HGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFR 359
               ++ S Y LARS+H +GDY++A  YY  + +  +   +F+ P +GLGQ+ +  GD  
Sbjct: 306 VEAIQAESCYQLARSFHVQGDYDQAFQYYYQATQFAST--QFVLPQFGLGQMYIYRGDNE 363

Query: 360 SALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKIDPRDAQAFIDL 416
           +A   FEKVL+ +P+N ET+K LG +Y Q    EK   A++ L+K  +  P D +A+I+L
Sbjct: 364 NAAQCFEKVLKHFPNNYETMKILGSLYAQSSDQEKRDIAKQHLKKVTEQFPDDVEAWIEL 423

Query: 417 GELLISSDTGAALDAFKTARTLLK-KAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
            ++L  SD   AL A+ TA  +LK K   +VP E+LNN+G +HF  G  + A        
Sbjct: 424 AQILEQSDIQGALQAYGTATRILKEKVQADVPPEILNNVGALHFRLGNLQEA-------- 475

Query: 476 GDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWN--KVTVLFNLAR 533
                        K YV                 R + +  H E  ++   VT  +NLAR
Sbjct: 476 ------------KKYYVAS-------------LDRSKQEAQHDETYYSAISVTTSYNLAR 510

Query: 534 LLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYP 593
           L E +     A  LY+ +L ++ +YVD YLRL  +A+ R  +  + +   EAL++N  +P
Sbjct: 511 LFEALCMYQDAERLYKEVLREHPNYVDCYLRLGCMARDRGQIYEASDWFKEALQINQDHP 570

Query: 594 NALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKL 652
           +A S++G+L L   +W   ++ F R         D+Y+ L+LGN  +   L   +R  + 
Sbjct: 571 DAWSLIGNLHLAKQEWGPGQKKFERILKHPDTASDAYSMLALGNV-WLQTLHQPQRDKEK 629

Query: 653 EATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQ 712
           E  H ++A  +Y +V+     NLYAANG G VLA+K     ++D+F QV+EA +      
Sbjct: 630 EKRHQDRALAMYKQVLRNDPKNLYAANGIGAVLAQKNCIREARDVFAQVREATA-----D 684

Query: 713 MPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKS 772
           M DVW+NLAH+Y  Q  +  A++MY+NCL+KFY   D  +LLYLAR +Y+  + ++C++ 
Sbjct: 685 MRDVWLNLAHIYVEQRQYVSAIQMYENCLKKFYKCQDTDVLLYLARAYYKLGKHKECRQI 744

Query: 773 LLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAA 832
           LL+A H++P +  L ++  + MQK + S L+  +     V   V ELE A R F++LS  
Sbjct: 745 LLKARHVSPHDTVLLYNMSLVMQKMATSVLKDEKSNLKTVLGAVRELELAHRYFNYLSRE 804

Query: 833 SNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNR-------QRQEAARQAAL 885
            +     FD K+       C  LL  A+ H   A R++++ R       Q +EA RQ  L
Sbjct: 805 GDRMR--FDLKQAELEARQCSDLLSQAQYHVARARRQDEEEREVRMRQEQEREALRQKQL 862

Query: 886 AEEARRKAEE---QKKYLLEKRK 905
            EE R+K EE   Q + L EKR+
Sbjct: 863 -EEQRKKTEEREQQARELEEKRR 884


>gi|156364414|ref|XP_001626343.1| predicted protein [Nematostella vectensis]
 gi|156213216|gb|EDO34243.1| predicted protein [Nematostella vectensis]
          Length = 1072

 Score =  535 bits (1378), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 327/921 (35%), Positives = 523/921 (56%), Gaps = 66/921 (7%)

Query: 4   VYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQIL 63
           + IP+++++E + +  DQLP D  ++L ILK E   L++W  +A +Y+KQGK E F +IL
Sbjct: 5   IEIPLRDTDEVIELQFDQLP-DGEELLSILKQEDVRLNIWNTLALQYYKQGKTEDFIRIL 63

Query: 64  EEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRI 123
           E   + + +  Y D   +++  L+ L  +Y    + E  + +K+E F  AT  Y  A +I
Sbjct: 64  ESART-DANRKYGDSEKDQMVCLDTLAAFYVQQARKEKNKEKKKELFTQATSLYTMADKI 122

Query: 124 DMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSL 182
            M++ +  +G+    L +G+ +EQA + F  VL    +N+PALLG+AC+ FN+  Y ++L
Sbjct: 123 IMYDQNHLLGRAYFCLLEGDKMEQADAQFNFVLAQSGNNIPALLGKACIFFNKRDYKNAL 182

Query: 183 EFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDL 242
            FYK+AL+ +P+CPGA+RLG+G C  KL +L KAR AF+RAL+L+P    A+V LA+++L
Sbjct: 183 AFYKKALRTNPNCPGAVRLGMGHCFVKLNKLDKARLAFKRALELEPRCTGAMVGLAILEL 242

Query: 243 QANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGP 302
            + +   I+ G++ + +A+ I     M LN+LANHFFF   +  V+ L   A   T    
Sbjct: 243 NSKKPDSIKIGVQLLSKAYTIDNSNPMVLNHLANHFFFKKDYSKVQHLALHAFHGTEVEA 302

Query: 303 TKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSAL 362
            ++ S Y LAR++H +GD+++A  YY  +  +   P+ FI P++GLGQ+ +   D  +A 
Sbjct: 303 MQAESCYQLARAFHVQGDFDQAFQYYYQAT-QFASPN-FILPHFGLGQMYIARRDLNNAS 360

Query: 363 TNFEKVLEIYPDNCETLKALGHIY---VQLGQIEKAQELLRKAAKIDPRDAQAFIDLGEL 419
             FEKVL+  P N ET+K LG +Y     L + E A++ L+K  +  P D +A+I+L  +
Sbjct: 361 QCFEKVLKAMPGNYETMKILGSLYSPSSDLVKRELARQHLKKVTEQHPDDVEAWIELAGI 420

Query: 420 LISSDTGAALDAFKTARTLLKKAGE-EVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDG 478
           L  SD  AAL A+ TA  LLK+  E +VP E+LNN+G +HF  G  + A + ++ +L   
Sbjct: 421 LEQSDVQAALQAYGTASRLLKEKVEADVPPEILNNVGALHFRLGNLKEAKRFYESSLD-- 478

Query: 479 IWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQI 538
                                   +  Q  H  E+  N +      VT  +NLARL E +
Sbjct: 479 ------------------------RSKQESHNDESYYNAIS-----VTTTYNLARLHEAM 509

Query: 539 HDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSM 598
            +   A  LY+ IL ++ +YVD YLRL  +A+ R  +  + +   EAL++N  +P+A S+
Sbjct: 510 CEIDKAEQLYKNILREHPNYVDCYLRLGCMARNRGQIYEASDWFKEALQINQDHPDAWSL 569

Query: 599 LGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHL 657
           +G+L L   +W   ++ F R     +   D+Y+ L+LGN  +   L    R    E  H 
Sbjct: 570 IGNLHLAKQEWGPGQKKFERILKQPSTANDAYSLLALGNV-WLQTLHAPTRDKAKERRHQ 628

Query: 658 EKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVW 717
           ++A  +Y +V+   + NLYAANG G +LA KG    ++D+F+QV+EA +      +PDVW
Sbjct: 629 DRALAMYKQVLRNDSRNLYAANGIGCILAHKGYIREARDVFSQVREATA-----DVPDVW 683

Query: 718 INLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAI 777
           +NLAH+Y  Q  +  A++MY+NCLRKF+ +   +++LYLAR +Y A + +DCK+ LL+A 
Sbjct: 684 LNLAHIYVEQKQYVSAIQMYENCLRKFFKHHSVEVMLYLARAYYRAGKLKDCKRVLLKAR 743

Query: 778 HLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHL 837
           H++P++  L F+  +  QK +   L+  + +   V   V ELE A R F+ LS       
Sbjct: 744 HVSPNDTILLFNVSLVQQKLATGILRAEKSSLKVVLGAVGELEQAQRNFTWLSR------ 797

Query: 838 HG----FDEKKINTHVEYCKHLLDAAKIHREAAER---EEQQNRQRQEAARQA---ALAE 887
           HG    FD         +   LL  A+ H   A +   +EQ+ R++QEA ++A   +  E
Sbjct: 798 HGDRMKFDLAWAAYESRHTSDLLSQAQYHVSRARKLDEQEQELRRKQEAEKEALRRSKEE 857

Query: 888 EAR---RKAEEQKKYLLEKRK 905
           E R   ++ EEQ++ +LEKR+
Sbjct: 858 EERSRQKEREEQERLMLEKRQ 878


>gi|291190510|ref|NP_001167125.1| RNA polymerase-associated protein CTR9 homolog [Salmo salar]
 gi|223648266|gb|ACN10891.1| RNA polymerase-associated protein CTR9 homolog [Salmo salar]
          Length = 1158

 Score =  535 bits (1377), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 327/943 (34%), Positives = 523/943 (55%), Gaps = 70/943 (7%)

Query: 2   ACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQ 61
             + IP+++++E + +  DQLP +  +++ ILK E   L +W+ +A EY+KQ K E F +
Sbjct: 4   GSIEIPLRDTDEVIELDFDQLP-EGDEVISILKQEHTQLHIWIALALEYYKQTKTEDFVK 62

Query: 62  ILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNK 119
           +LE   +  ID    Y D   +++  L+ L  YY    + E  +  K+E    AT  Y  
Sbjct: 63  LLE---AARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDAKKELITQATLLYTM 119

Query: 120 ASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRY 178
           A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+PALLG+AC+ FN+  Y
Sbjct: 120 ADKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSTNNIPALLGKACISFNKKDY 179

Query: 179 SDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA 238
             +L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF RAL+L+ + V ALV LA
Sbjct: 180 RGALAYYKKALRTNPGCPAEVRLGMGHCFVKLSKLEKARLAFGRALELNSKCVGALVGLA 239

Query: 239 VMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVT 298
           V++L + E   I+ G++ + RA+ I P   M LN+LANHFFF   +  V+ L   A   T
Sbjct: 240 VLELNSKEPDSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNT 299

Query: 299 NHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDF 358
                ++ S Y LARS+H + DY++A  YY  + +  +    F+ P++GLGQ+ +   D 
Sbjct: 300 EVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASST--FVLPFFGLGQMYVYRRDK 357

Query: 359 RSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKIDPRDAQAFID 415
            +A   FEKVL+ YP+N ET+K LG +Y      EK   A+  L+K  +  P D +A+I+
Sbjct: 358 ENAAQCFEKVLKAYPNNYETMKILGSLYATSDDQEKRDIAKGHLKKVTEQYPDDVEAWIE 417

Query: 416 LGELLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDA 474
           L ++L  +D   AL A+ TA R L +K   +VP E+LNN+G +HF  G    A + F   
Sbjct: 418 LAQILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNLGALHFRLGNLGEAKKYF--- 474

Query: 475 LGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWN--KVTVLFNLA 532
                 L  LD                        R + +G H E  +N   VT  +NLA
Sbjct: 475 ------LASLD------------------------RAKAEGEHDEHYYNAISVTTSYNLA 504

Query: 533 RLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKY 592
           RL E + +   A  LY+ IL ++ +YVD YLRL A+A+ + N   + +   EAL++N  +
Sbjct: 505 RLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEASDWFKEALQINQDH 564

Query: 593 PNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYFAALRNEKRAPK 651
           P+A S++G+L L   +W   ++ F R     +   D+Y+ L+LGN  +   L    R  +
Sbjct: 565 PDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQNDTYSMLALGNV-WLQTLHQPTRDRE 623

Query: 652 LEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFV 711
            E  H ++A  +Y +V+   + NLYAANG G VLA KG +  ++D+F QV+EA +     
Sbjct: 624 KEKRHQDRALAIYKQVLRNDSKNLYAANGIGAVLAHKGYYREARDVFAQVREATA----- 678

Query: 712 QMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKK 771
            + DVW+NLAH+Y  Q  +  A++MY+NCL+KFY + + ++LLYLAR  ++  + Q+CK+
Sbjct: 679 DISDVWLNLAHIYVEQKQYISAVQMYENCLKKFYKHQNTEVLLYLARALFKCGKLQECKQ 738

Query: 772 SLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSA 831
           +LL+A H+APS+  L F+  + +Q+ +   L+  +     V S V ELE A R FS+L+ 
Sbjct: 739 TLLKARHVAPSDTVLMFNVALVLQRLATLVLKDEKSNLKAVLSAVKELELAHRYFSYLAK 798

Query: 832 ASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEAARQAALAEEARR 891
           A +     FD    +T    C  LL  A+ H   A +++++ +             E R 
Sbjct: 799 AGDKMR--FDLVLASTEARQCSDLLSQAQYHVARARKQDEEEK-------------EIRA 843

Query: 892 KAEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVKARIFYICSIK 934
           K ++++ +L ++   E E+KR +Q+E+  + ++ R  Y+   K
Sbjct: 844 KQDQERDFLRQQMHKEQEEKRTKQEEDQKKLLEQRAMYVEKTK 886


>gi|296217556|ref|XP_002755094.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog
           [Callithrix jacchus]
          Length = 1173

 Score =  534 bits (1376), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 331/922 (35%), Positives = 516/922 (55%), Gaps = 66/922 (7%)

Query: 2   ACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQ 61
             + IP+++++E + +  DQLP +  +++ ILK E   L +W+ +A EY+KQGK E+F +
Sbjct: 4   GSIEIPLRDTDEVIELDFDQLP-EGDEVISILKQEHTQLHIWIALALEYYKQGKTEEFVK 62

Query: 62  ILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNK 119
           +LE   +  ID    Y D   +++  L+ L  YY    + E  +  K++    AT  Y  
Sbjct: 63  LLE---AARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARREKNKDNKKDLITQATLLYTM 119

Query: 120 ASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRY 178
           A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+PALLG+AC+ FN+  Y
Sbjct: 120 ADKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPALLGKACISFNKKDY 179

Query: 179 SDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA 238
             +L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF RAL+L+ + V ALV LA
Sbjct: 180 RGALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALELNSKCVGALVGLA 239

Query: 239 VMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVT 298
           V++L   EA  I+ G++ + RA+ I P   M LN+LANHFFF   +  V+ L   A   T
Sbjct: 240 VLELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNT 299

Query: 299 NHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDF 358
                ++ S Y LARS+H + DY++A  YY  + +  +    F+ P++GLGQ+ +  GD 
Sbjct: 300 EVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASSS--FVLPFFGLGQMYIYRGDK 357

Query: 359 RSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKIDPRDAQAFID 415
            +A   FEKVL+ YP+N ET+K LG +Y      EK   A+  L+K  +  P D +A+I+
Sbjct: 358 ENASQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKVTEQYPDDVEAWIE 417

Query: 416 LGELLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDA 474
           L ++L  +D   AL A+ TA R L +K   +VP E+LNN+G +HF  G    A + F   
Sbjct: 418 LAQILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYF--- 474

Query: 475 LGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWN--KVTVLFNLA 532
                 L  LD                        R + +  H E  +N   VT  +NLA
Sbjct: 475 ------LASLD------------------------RAKAEAEHDEHYYNAISVTTSYNLA 504

Query: 533 RLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKY 592
           RL E + +   A  LY+ IL ++ +YVD YLRL A+A+ + N   + +   EAL++N  +
Sbjct: 505 RLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEASDWFKEALQINQDH 564

Query: 593 PNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYFAALRNEKRAPK 651
           P+A S++G+L L   +W   ++ F R     +   D+Y+ L+LGN  +   L    R  +
Sbjct: 565 PDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQSDTYSMLALGNV-WLQTLHQPTRDRE 623

Query: 652 LEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFV 711
            E  H ++A  +Y +V+     NLYAANG G VLA KG F  ++D+F QV+EA +     
Sbjct: 624 KEKRHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHKGYFREARDVFAQVREATA----- 678

Query: 712 QMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKK 771
            + DVW+NLAH+Y  Q  +  A++MY+NCLRKFY + + +++LYLAR  ++  + Q+CK+
Sbjct: 679 DISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVVLYLARALFKCGKLQECKQ 738

Query: 772 SLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSA 831
           +LL+A H+APS+  L F+  + +Q+ + S L+  +    EV + V ELE A R FS+LS 
Sbjct: 739 TLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVLNAVKELELAHRYFSYLSK 798

Query: 832 ASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNR-------QRQEAARQAA 884
             +     FD     T    C  LL  A+ H   A +++++ R       Q +E  RQ  
Sbjct: 799 VGDKMR--FDLALAATEARQCSDLLSQAQYHVARARKQDEEERELRAKQEQEKELLRQKL 856

Query: 885 LAEE--ARRKAEEQKKYLLEKR 904
           L E+   R + +E++K LLE+R
Sbjct: 857 LKEQEEKRLREKEEQKKLLEQR 878


>gi|403254243|ref|XP_003919885.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Saimiri
           boliviensis boliviensis]
          Length = 1173

 Score =  534 bits (1376), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 331/922 (35%), Positives = 516/922 (55%), Gaps = 66/922 (7%)

Query: 2   ACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQ 61
             + IP+++++E + +  DQLP +  +++ ILK E   L +W+ +A EY+KQGK E+F +
Sbjct: 4   GSIEIPLRDTDEVIELDFDQLP-EGDEVISILKQEHTQLHIWIALALEYYKQGKTEEFVK 62

Query: 62  ILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNK 119
           +LE   +  ID    Y D   +++  L+ L  YY    + E  +  K++    AT  Y  
Sbjct: 63  LLE---AARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARREKNKDNKKDLITQATLLYTM 119

Query: 120 ASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRY 178
           A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+PALLG+AC+ FN+  Y
Sbjct: 120 ADKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPALLGKACISFNKKDY 179

Query: 179 SDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA 238
             +L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF RAL+L+ + V ALV LA
Sbjct: 180 RGALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALELNSKCVGALVGLA 239

Query: 239 VMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVT 298
           V++L   EA  I+ G++ + RA+ I P   M LN+LANHFFF   +  V+ L   A   T
Sbjct: 240 VLELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNT 299

Query: 299 NHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDF 358
                ++ S Y LARS+H + DY++A  YY  + +  +    F+ P++GLGQ+ +  GD 
Sbjct: 300 EVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASS--SFVLPFFGLGQMYIYRGDK 357

Query: 359 RSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKIDPRDAQAFID 415
            +A   FEKVL+ YP+N ET+K LG +Y      EK   A+  L+K  +  P D +A+I+
Sbjct: 358 ENASQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKVTEQYPDDVEAWIE 417

Query: 416 LGELLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDA 474
           L ++L  +D   AL A+ TA R L +K   +VP E+LNN+G +HF  G    A + F   
Sbjct: 418 LAQILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYF--- 474

Query: 475 LGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWN--KVTVLFNLA 532
                 L  LD                        R + +  H E  +N   VT  +NLA
Sbjct: 475 ------LASLD------------------------RAKAEAEHDEHYYNAISVTTSYNLA 504

Query: 533 RLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKY 592
           RL E + +   A  LY+ IL ++ +YVD YLRL A+A+ + N   + +   EAL++N  +
Sbjct: 505 RLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEASDWFKEALQINQDH 564

Query: 593 PNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYFAALRNEKRAPK 651
           P+A S++G+L L   +W   ++ F R     +   D+Y+ L+LGN  +   L    R  +
Sbjct: 565 PDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQSDTYSMLALGNV-WLQTLHQPTRDRE 623

Query: 652 LEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFV 711
            E  H ++A  +Y +V+     NLYAANG G VLA KG F  ++D+F QV+EA +     
Sbjct: 624 KEKRHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHKGYFREARDVFAQVREATA----- 678

Query: 712 QMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKK 771
            + DVW+NLAH+Y  Q  +  A++MY+NCLRKFY + + +++LYLAR  ++  + Q+CK+
Sbjct: 679 DISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVVLYLARALFKCGKLQECKQ 738

Query: 772 SLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSA 831
           +LL+A H+APS+  L F+  + +Q+ + S L+  +    EV + V ELE A R FS+LS 
Sbjct: 739 TLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVLNAVKELELAHRYFSYLSK 798

Query: 832 ASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNR-------QRQEAARQAA 884
             +     FD     T    C  LL  A+ H   A +++++ R       Q +E  RQ  
Sbjct: 799 VGDKMR--FDLALAATEARQCSDLLSQAQYHVARARKQDEEERELRAKQEQEKELLRQKL 856

Query: 885 LAEE--ARRKAEEQKKYLLEKR 904
           L E+   R + +E++K LLE+R
Sbjct: 857 LKEQEEKRLREKEEQKKLLEQR 878


>gi|134133313|ref|NP_001077052.1| RNA polymerase-associated protein CTR9 homolog [Danio rerio]
 gi|126635345|dbj|BAF48400.1| RNA polymerase-associated protein Ctr9 homolog [Danio rerio]
          Length = 1160

 Score =  532 bits (1371), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 331/923 (35%), Positives = 515/923 (55%), Gaps = 68/923 (7%)

Query: 2   ACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQ 61
             + IP+++++E + +  DQLP +  +++ ILK E   L +W+ +A EY+KQGK E F +
Sbjct: 4   GSIEIPLRDTDEVIELDFDQLP-EGDEVISILKQEHTQLHIWIALALEYYKQGKTEDFVK 62

Query: 62  ILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNK 119
           +LE   +  ID    Y D   +++  L+ L  YY    + E  +  K++    +T  Y  
Sbjct: 63  LLE---AARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDAKKDLINQSTLLYTM 119

Query: 120 ASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRY 178
           A +I M++ +  +G+    L +G+ ++QA + F+ VL    +N+PALLG+AC+ FN+  Y
Sbjct: 120 ADKIIMYDQNHLLGRACFCLLEGDKMDQADAQFQFVLNQSTNNIPALLGKACISFNKKDY 179

Query: 179 SDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA 238
             +L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF RAL+L+ + V ALV LA
Sbjct: 180 RGALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFGRALELNSKCVGALVGLA 239

Query: 239 VMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVT 298
           V++L   EA  I+ G++ + RA+ I P   M LN+LANHFFF   +  V+ L   A   T
Sbjct: 240 VLELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNT 299

Query: 299 NHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDF 358
                ++ S Y LARS+H + DY++A  YY  + +  +    F+ P++GLGQ+ +   D 
Sbjct: 300 EVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASST--FVLPFFGLGQMYVYRRDK 357

Query: 359 RSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKIDPRDAQAFID 415
            +A   FEKVL+ YP+N ET+K LG +Y      EK   A+E L+K       D +A+I+
Sbjct: 358 ENAAQCFEKVLKAYPNNYETMKILGSLYATSDDQEKRDIAKEHLKKVTVQYSDDVEAWIE 417

Query: 416 LGELLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDA 474
           L ++L  +D   AL A+ TA R L +K   +VP E+LNN+G +HF  G    A + F   
Sbjct: 418 LAQILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNLGALHFRLGNLGEAKKYF--- 474

Query: 475 LGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWN--KVTVLFNLA 532
                                         +    R + +G H E  +N   VT  +NLA
Sbjct: 475 ------------------------------LASLERAKAEGEHDEHYYNAISVTTSYNLA 504

Query: 533 RLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKY 592
           RL E + +   A  LY+ IL ++ +YVD YLRL A+A+ + N   + +   EAL++N  +
Sbjct: 505 RLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEASDWFKEALQINQDH 564

Query: 593 PNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYFAALRNEKRAPK 651
           P+A S++G+L L   +W   ++ F R     +   D+Y+ L+LGN  +   L    R  +
Sbjct: 565 PDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQNDTYSMLALGNV-WLQTLHQPTRDRE 623

Query: 652 LEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFV 711
            E  H ++A  +Y +V+   + NLYAANG G VLA KG F  ++D+F QV+EA +     
Sbjct: 624 KEKRHQDRALAIYKQVLRNDSKNLYAANGIGAVLAHKGYFREARDVFAQVREATA----- 678

Query: 712 QMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKK 771
           ++ DVW+NLAH+Y  Q  +  A++MY+NCL+KFY   + ++LLYLAR  ++  + Q+CK+
Sbjct: 679 EISDVWLNLAHIYVEQKQYISAVQMYENCLKKFYKYQNTEVLLYLARALFKCGKLQECKQ 738

Query: 772 SLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSA 831
           +LLRA H+AP++  L F+  + +Q+ +   L+  +     V S V ELE A R FS+LS 
Sbjct: 739 TLLRARHVAPNDTVLMFNVALVLQRLATLVLKDEKSNLKAVLSAVKELELAHRYFSYLSK 798

Query: 832 ASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAER---EEQQNRQRQEAA----RQAA 884
           + +     FD     +    C  LL  A+ H   A +   EE+++R +QE      RQ  
Sbjct: 799 SGDKMR--FDLALAASEARQCSDLLSQAQYHVARARKQDEEEKEHRAKQEQERDLLRQQI 856

Query: 885 LAEEARRK---AEEQKKYLLEKR 904
           + E+  RK   AEEQKK LLE+R
Sbjct: 857 MKEQEERKSREAEEQKK-LLEQR 878


>gi|410913167|ref|XP_003970060.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymerase-associated protein
           CTR9 homolog [Takifugu rubripes]
          Length = 1159

 Score =  532 bits (1371), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 329/943 (34%), Positives = 516/943 (54%), Gaps = 70/943 (7%)

Query: 2   ACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQ 61
             + IP+++++E + +  DQLP +  +++ ILK E   L +W+ +A EY+KQGK E F +
Sbjct: 4   GSIEIPLRDTDEVIELDFDQLP-EGDEVISILKQEHTQLHIWIALALEYYKQGKTEDFVK 62

Query: 62  ILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNK 119
           +LE   +  ID    Y D   +++  L+ L  YY    + E  +  K+E    AT  Y  
Sbjct: 63  LLE---AARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDAKKELITQATLLYTM 119

Query: 120 ASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRY 178
           A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+PALLG+AC+ FN+  Y
Sbjct: 120 ADKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSTNNIPALLGKACISFNKKDY 179

Query: 179 SDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA 238
             +L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF RAL+L+ + V ALV LA
Sbjct: 180 RGALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFGRALELNSKCVGALVGLA 239

Query: 239 VMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVT 298
           V++L   EA  I+ G++ + RA+ I P   M LN+LANHFFF   +  V+ L   A   T
Sbjct: 240 VLELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNT 299

Query: 299 NHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDF 358
                ++ S Y LARS+H + DY++A  YY  + +  +    F+ P++GLGQ+ +   D 
Sbjct: 300 EVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASST--FVLPFFGLGQMYVYRRDK 357

Query: 359 RSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKIDPRDAQAFID 415
            +A   FEKVL+ YP+N ET+K LG +Y      EK   A+  L+K  +  P D +A+I+
Sbjct: 358 ENAAQCFEKVLKAYPNNYETMKILGSLYAASDDQEKRDIAKGHLKKVTEQYPDDVEAWIE 417

Query: 416 LGELLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDA 474
           L ++L  +D   AL A+ TA R L +K   +VP E+LNN+G +HF  G    A + F   
Sbjct: 418 LAQILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNLGALHFRLGNLGEAKKYF--- 474

Query: 475 LGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWN--KVTVLFNLA 532
                                         +    R + +G H E  +N   VT  +NLA
Sbjct: 475 ------------------------------LASLERAKAEGEHDEHYYNAISVTTSYNLA 504

Query: 533 RLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKY 592
           RL E + +   A  LY+ IL ++ +YVD YLRL A+A+ + N   + +   EAL++N  +
Sbjct: 505 RLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEASDWFKEALQINQDH 564

Query: 593 PNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYFAALRNEKRAPK 651
           P+A S++G+L L   +W   ++ F R     +   D+Y+ L+LGN  +   L    R  +
Sbjct: 565 PDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQNDTYSMLALGNV-WLQTLHQPTRDRE 623

Query: 652 LEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFV 711
            E  H ++A  +Y +V+     NLYAANG G VLA KG +  ++D+F QV+EA +     
Sbjct: 624 KEKRHQDRALAIYKQVLRNDPKNLYAANGIGAVLAHKGYYREARDVFAQVREATA----- 678

Query: 712 QMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKK 771
            + DVW+NLAH+Y  Q  +  A++MY+NCL+KFY   + ++LLYLAR  ++  + QDCK+
Sbjct: 679 DISDVWLNLAHIYVEQKQYISAVQMYENCLKKFYKYQNTEVLLYLARALFKCGKLQDCKQ 738

Query: 772 SLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSA 831
            LL+A H+APS+  L F+  + +Q+ +   L+  +     V S V ELE A R FS+LS 
Sbjct: 739 MLLKARHVAPSDTVLMFNVALVLQRLATLVLKDEKSNLKAVLSAVKELELAHRYFSYLSK 798

Query: 832 ASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEAARQAALAEEARR 891
           A +     FD     +    C  LL  A+ H   A +++++ +             E R 
Sbjct: 799 AGDKMR--FDLALAASEARQCSDLLSQAQYHVARARKQDEEEK-------------ELRA 843

Query: 892 KAEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVKARIFYICSIK 934
           K E+++  L ++   E EQKR ++ EE  + ++ R  Y+   K
Sbjct: 844 KQEQERDLLRQQLLKEQEQKRNKELEEQKKLLEQRAMYVEKTK 886


>gi|327259895|ref|XP_003214771.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymerase-associated protein
           CTR9 homolog [Anolis carolinensis]
          Length = 1244

 Score =  532 bits (1370), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 336/934 (35%), Positives = 516/934 (55%), Gaps = 70/934 (7%)

Query: 11  SEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQILEEGSSPE 70
           S E + +  DQLP +  +++ ILK E   L +W+ +A EY+KQGK E F ++LE   +  
Sbjct: 78  SYEVIELDFDQLP-EGDEVISILKQEHTQLHIWIALALEYYKQGKTEDFVKLLE---AAR 133

Query: 71  IDEY--YADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEP 128
           ID    Y D   +++  L+ L  YY    + E  +  K+E    AT  Y  A +I M++ 
Sbjct: 134 IDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNKKELITQATLLYTMADKIIMYDQ 193

Query: 129 STWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKR 187
           +  +G+    L +G+ ++QA + F  VL    +N+PALLG+AC+ FN+  Y  +L +YK+
Sbjct: 194 NHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPALLGKACISFNKKDYRGALAYYKK 253

Query: 188 ALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEA 247
           AL+ +P CP  +RLG+G C  KL +L KAR AF RAL+L+ + V ALV LAV++L   EA
Sbjct: 254 ALRTNPGCPAEVRLGMGHCFVKLSKLEKARLAFSRALELNSKCVGALVGLAVLELNNKEA 313

Query: 248 AGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHS 307
             I+ G++ + RA+ I P   M LN+LANHFFF   +  V+ L   A   T     ++ S
Sbjct: 314 DSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYGKVQHLALHAFHNTEVEAMQAES 373

Query: 308 YYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEK 367
            Y LARS+H + DY++A  YY  + +  +    F+ P++GLGQ+ +  GD  +A   FEK
Sbjct: 374 CYQLARSFHVQEDYDQAFQYYYQATQFASS--SFVLPFFGLGQMYIYRGDKENASQCFEK 431

Query: 368 VLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKIDPRDAQAFIDLGELLISSD 424
           VL+ YP+N ET+K LG +Y      +K   A+  L+K  +  P D +A+I+L ++L  +D
Sbjct: 432 VLKAYPNNYETMKILGSLYAASEDQDKRDIAKGHLKKVTEQYPDDVEAWIELAQILEQTD 491

Query: 425 TGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTL 483
              AL A+ TA R L +K   +VP E+LNN+G +HF  G    A + F         L  
Sbjct: 492 IQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYF---------LAS 542

Query: 484 LDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWN--KVTVLFNLARLLEQIHDT 541
           LD                        R + +  H E  +N   VT  +NLARL E + + 
Sbjct: 543 LD------------------------RAKAEAEHDEHYYNAISVTTSYNLARLYEAMCEF 578

Query: 542 VAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGD 601
             A  LY+ IL ++ +YVD YLRL A+A+ + N   + +   EAL++N  +P+A S++G+
Sbjct: 579 HEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEASDWFKEALQINQDHPDAWSLIGN 638

Query: 602 LELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKA 660
           L L   +W   ++ F R     +   D+Y+ L+LGN  +   L    R  + E  H ++A
Sbjct: 639 LHLAKQEWGPGQKKFERILKQPSTQNDTYSMLALGNV-WLQTLHQPTRDREKEKRHQDRA 697

Query: 661 KELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINL 720
             +Y +V+     NLYAANG G VLA KG F  ++D+F QV+EA +      + DVW+NL
Sbjct: 698 LAIYKQVLRNDPKNLYAANGIGAVLAHKGYFREARDVFAQVREATA-----DISDVWLNL 752

Query: 721 AHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLA 780
           AH+Y  Q  +  A++MY+NCLRKFY + + ++LLYLAR  ++  + Q+CK++LL+A H+A
Sbjct: 753 AHIYVEQKQYISAVQMYENCLRKFYKHQNTEVLLYLARALFKCGKLQECKQTLLKARHVA 812

Query: 781 PSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGF 840
           PS+  L F+  + +Q+ + S L+  +    EV + V ELE A R FS+LS   +     F
Sbjct: 813 PSDTVLMFNVALVLQRLATSVLKDEKSNLKEVLNAVKELELAHRYFSYLSKVGDKMR--F 870

Query: 841 DEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEAARQAALAEEARRKAEEQKKYL 900
           D     T    C  LL  A+ H   A +++++ R             E R K E++K+ L
Sbjct: 871 DLALAATEARQCSDLLSQAQYHVARARKQDEEER-------------ELRAKQEQEKELL 917

Query: 901 LEKRKLEDEQKRLRQQEEHFQRVKARIFYICSIK 934
            +K   E E+KRLR+ EE  + ++ R  Y+   K
Sbjct: 918 RQKLLKEQEEKRLREIEEQKKLLEQRAQYVEKTK 951


>gi|427776753|gb|JAA53828.1| Putative rna polymerase-associated protein ctr9 [Rhipicephalus
           pulchellus]
          Length = 1263

 Score =  531 bits (1368), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 326/943 (34%), Positives = 519/943 (55%), Gaps = 70/943 (7%)

Query: 2   ACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQ 61
             + IP+++++E + + +DQLP +  ++L IL+ EQA L LW+ +A EY++QGKV+ F +
Sbjct: 3   GSIEIPLRDTDEVIELDVDQLP-EGEEVLGILRQEQAQLHLWVNLALEYYRQGKVDDFVR 61

Query: 62  ILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKAS 121
           +LE G + E    Y D   +++  L+ L  YY      E  +  K E F  AT  Y  A 
Sbjct: 62  LLEAGRT-EARLDYRDFEQDQMTCLDTLAAYYVQKASKEKNKDRKHELFTKATLLYTTAD 120

Query: 122 RIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSD 180
           +I M+  +  +G+    L +G+ ++QA + F  VL    +N+P+LLG+AC+ FN+  Y  
Sbjct: 121 KIIMYTQNHLLGRAYFCLLEGDKMDQADAQFNFVLNQSPNNIPSLLGKACIAFNKKDYRG 180

Query: 181 SLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVM 240
           +L FYK+AL+ +P+CP  +RLG+G C Y+LG+  KAR AF+RAL LDP+ V AL  LAV+
Sbjct: 181 ALAFYKKALRTNPNCPAEVRLGMGHCLYRLGKQEKARAAFERALVLDPQCVGALSGLAVL 240

Query: 241 DLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 300
            L        R G++ + RA+ + P C + LN LANHFFF   +  V+ L   A   T +
Sbjct: 241 QLNQKGTEATRAGVQMLSRAYAVDPSCPVVLNQLANHFFFKKDYGKVQHLALHAFHNTEN 300

Query: 301 GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRS 360
              ++ S Y LARS+H + DY++A  YY  + +    P  F+ P++GLGQ+ +  GD  +
Sbjct: 301 EAMRAESCYQLARSFHVQEDYDQAFQYYYQATQ--FAPPSFVLPHFGLGQMYIFRGDVDN 358

Query: 361 ALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKIDPRDAQAFIDLG 417
           A   FEKVL+  P N ET+K LG +Y       K   A+  L+K     P D +A+I+L 
Sbjct: 359 AAQCFEKVLKAQPGNYETMKILGSLYANSSSQSKRDQAKTHLKKVTDQFPEDVEAWIELA 418

Query: 418 ELLISSDTGAALDAFKTARTLLK-KAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALG 476
           ++L  SD   AL A+ TA  LL+ K   +VP E+LNN+G +HF  G  + A + ++ +L 
Sbjct: 419 QILEQSDVQGALSAYGTATRLLQDKVKADVPPEILNNVGALHFRMGNLQEARRFYEASL- 477

Query: 477 DGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWN--KVTVLFNLARL 534
                                            R   + N+ E  ++   VT  +NLARL
Sbjct: 478 --------------------------------ERSRTEANNDEHYYSSISVTTTYNLARL 505

Query: 535 LEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPN 594
            E +     A   Y+ IL ++ +YVD YLRL  +A+ R  +  + +   EAL+VN ++P+
Sbjct: 506 YEALSLFDRAEQAYKNILREHPNYVDCYLRLGCMARDRGQIYEASDWFKEALQVNQEHPD 565

Query: 595 ALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEA 654
           + S++G+L L   +W   ++ F        G D+Y+ ++LGN  +   L    R    E 
Sbjct: 566 SWSLIGNLHLAKQEWGPGQKKFERILKGAQG-DAYSLVALGNV-WLQTLHQPIRDRDKER 623

Query: 655 THLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMP 714
            H ++A  +Y +V+     N++AANG G VLA KG    S+D+F QV+EA +        
Sbjct: 624 RHQDRALAMYKQVLRLDPRNIWAANGVGAVLAHKGYISESRDIFAQVREATA-----DFC 678

Query: 715 DVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLL 774
           DVW+N+AH+Y  Q  +  A++MY+NCLRKFY +    IL+YLAR  +   + ++CK+ LL
Sbjct: 679 DVWLNIAHIYVEQKQYVAAIQMYENCLRKFYRHHHVDILVYLARALFRCNRLRECKRVLL 738

Query: 775 RAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASN 834
           RA  +AP +  L ++  + +QK +A  L+  + +   V S V EL  A R F +LS    
Sbjct: 739 RARRVAPQDTLLLYNIALVLQKLAAQCLRDDKSSLAVVLSAVHELGLAHRYFQYLS---- 794

Query: 835 LHLHG----FDEKKINTHVEYCKHLLDAAKIHREAAER---EEQQNRQRQEAARQAALAE 887
             +HG    +D  +       C+ LL  A+ H   A R   EE++ R++QE  R+A    
Sbjct: 795 --VHGDRMKYDLAQAAAESRQCQDLLSQAQYHVARARRMDEEEREIRRKQEEEREA---- 848

Query: 888 EARRKAEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVKARIFYI 930
             RRK  E+++ +LE++KLE E+  + +++E  ++ K+++ ++
Sbjct: 849 -LRRKISEEQR-MLEEQKLEQERAMIMKRQEFVEKSKSKMQFV 889


>gi|115304842|gb|AAI23598.1| CTR9 protein [Bos taurus]
          Length = 875

 Score =  529 bits (1363), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 323/901 (35%), Positives = 502/901 (55%), Gaps = 62/901 (6%)

Query: 4   VYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQIL 63
           + IP+++++E + +  DQLP +  +++ ILK E   L +W+ +A EY+KQGK E+F ++L
Sbjct: 6   IEIPLRDTDEVIELDFDQLP-EGDEVISILKQEHTQLHIWIALALEYYKQGKTEEFVKLL 64

Query: 64  EEGS-SPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASR 122
           E       +D  Y D   +++  L+ L  YY    + E  +  K++    AT  Y  A +
Sbjct: 65  EAARIDGNLD--YRDHEKDQMTCLDTLAAYYVQQARKEKNKDNKKDLITQATLLYTMADK 122

Query: 123 IDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDS 181
           I M++ +  +G+    L +G+ ++QA + F  VL    +N+PALLG+AC+ FN+  Y  +
Sbjct: 123 IIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPALLGKACISFNKKDYRGA 182

Query: 182 LEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMD 241
           L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF RAL+L+ + V ALV LAV++
Sbjct: 183 LAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALELNSKCVGALVGLAVLE 242

Query: 242 LQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG 301
           L   EA  I+ G++ + RA+ I P   M LN+LANHFFF   +  V+ L   A   T   
Sbjct: 243 LNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNTEVE 302

Query: 302 PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSA 361
             ++ S Y LARS+H + DY++A  YY  + +  +    F+ P++GLGQ+ +  GD  +A
Sbjct: 303 AMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASSS--FVLPFFGLGQMYIYRGDKENA 360

Query: 362 LTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKIDPRDAQAFIDLGE 418
              FEKVL+ YP+N ET+K LG +Y      EK   A+  L+K  +  P D +A+I+L +
Sbjct: 361 SQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKVTEQYPDDVEAWIELAQ 420

Query: 419 LLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGD 477
           +L  +D   AL A+ TA R L +K   +VP E+LNN+G +HF  G    A + F      
Sbjct: 421 ILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYF------ 474

Query: 478 GIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWN--KVTVLFNLARLL 535
              L  LD                        R + +  H E  +N   VT  +NLARL 
Sbjct: 475 ---LASLD------------------------RAKAEAEHDEHYYNAISVTTSYNLARLY 507

Query: 536 EQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNA 595
           E + +   A  LY+ IL ++ +YVD YLRL A+A+ + N   + +   EAL++N  +P+A
Sbjct: 508 EAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEASDWFKEALQINQDHPDA 567

Query: 596 LSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEA 654
            S++G+L L   +W   ++ F R         D+Y+ L+LGN  +   L    R  + E 
Sbjct: 568 WSLIGNLHLAKQEWGPGQKKFERILKQPATQSDTYSMLALGNV-WLQTLHQPTRDREKEK 626

Query: 655 THLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMP 714
            H ++A  +Y +V+     NLYAANG G VLA KG F  ++D+F QV+EA +      + 
Sbjct: 627 RHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHKGYFREARDVFAQVREATA-----DIS 681

Query: 715 DVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLL 774
           DVW+NLAH+Y  Q  +  A++MY+NCLRKFY + + +++LYLAR  ++  + Q+CK++LL
Sbjct: 682 DVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVVLYLARALFKCGKLQECKQTLL 741

Query: 775 RAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASN 834
           +A H+APS+  L F+  + +Q+ + S L+  +    EV + V ELE A R FS+LS   +
Sbjct: 742 KARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVLNAVKELELAHRYFSYLSKVGD 801

Query: 835 LHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNR-------QRQEAARQAALAE 887
                FD     T    C  LL  A+ H   A +++++ R       Q +E  RQ  L E
Sbjct: 802 --KMRFDLALAATEARQCSDLLSQAQYHVARARKQDEEERELRAKQEQEKELLRQKLLKE 859

Query: 888 E 888
           +
Sbjct: 860 Q 860


>gi|332836079|ref|XP_521841.3| PREDICTED: RNA polymerase-associated protein CTR9 homolog isoform 2
           [Pan troglodytes]
          Length = 1215

 Score =  529 bits (1362), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 331/920 (35%), Positives = 516/920 (56%), Gaps = 66/920 (7%)

Query: 4   VYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQIL 63
           + IP+++++E + +  DQLP +  +++ ILK E   L +W+ +A EY+KQGK E+F ++L
Sbjct: 6   IEIPLRDTDEVIELDFDQLP-EGDEVISILKQEHTQLHIWIALALEYYKQGKTEEFVKLL 64

Query: 64  EEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKAS 121
           E   +  ID    Y D   +++  L+ L  YY    + E  +  K++    AT  Y  A 
Sbjct: 65  E---AARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNKKDLITQATLLYTMAD 121

Query: 122 RIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSD 180
           +I M++ +  +G+    L +G+ ++QA + F  VL    +N+PALLG+AC+ FN+  Y  
Sbjct: 122 KIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPALLGKACISFNKKDYRG 181

Query: 181 SLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVM 240
           +L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF RAL+L+ + V ALV LAV+
Sbjct: 182 ALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALELNSKCVGALVGLAVL 241

Query: 241 DLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 300
           +L   EA  I+ G++ + RA+ I P   M LN+LANHFFF   +  V+ L   A   T  
Sbjct: 242 ELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNTEV 301

Query: 301 GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRS 360
              ++ S Y LARS+H + DY++A  YY  + +  +    F+ P++GLGQ+ +  GD  +
Sbjct: 302 EAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASS--SFVLPFFGLGQMYIYRGDKEN 359

Query: 361 ALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKIDPRDAQAFIDLG 417
           A   FEKVL+ YP+N ET+K LG +Y      EK   A+  L+K  +  P D +A+I+L 
Sbjct: 360 ASQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKVTEQYPDDVEAWIELA 419

Query: 418 ELLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALG 476
           ++L  +D   AL A+ TA R L +K   +VP E+LNN+G +HF  G    A + F     
Sbjct: 420 QILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYF----- 474

Query: 477 DGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWN--KVTVLFNLARL 534
               L  LD                        R + +  H E  +N   VT  +NLARL
Sbjct: 475 ----LASLD------------------------RAKAEAEHDEHYYNAISVTTSYNLARL 506

Query: 535 LEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPN 594
            E + +   A  LY+ IL ++ +YVD YLRL A+A+ + N   + +   EAL++N  +P+
Sbjct: 507 YEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEASDWFKEALQINQDHPD 566

Query: 595 ALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLE 653
           A S++G+L L   +W   ++ F R     +   D+Y+ L+LGN  +   L    R  + E
Sbjct: 567 AWSLIGNLHLAKQEWGPGQKKFERILKQPSTQSDTYSMLALGNV-WLQTLHQPTRDREKE 625

Query: 654 ATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQM 713
             H ++A  +Y +V+     NLYAANG G VLA KG F  ++D+F QV+EA +      +
Sbjct: 626 KRHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHKGYFREARDVFAQVREATA-----DI 680

Query: 714 PDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSL 773
            DVW+NLAH+Y  Q  +  A++MY+NCLRKFY + + +++LYLAR  ++  + Q+CK++L
Sbjct: 681 SDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVVLYLARALFKCGKLQECKQTL 740

Query: 774 LRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAAS 833
           L+A H+APS+  L F+  + +Q+ + S L+  +    EV + V ELE A R FS+LS   
Sbjct: 741 LKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVLNAVKELELAHRYFSYLSKVG 800

Query: 834 NLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNR-------QRQEAARQAALA 886
           +     FD     T    C  LL  A+ H   A +++++ R       Q +E  RQ  L 
Sbjct: 801 DKMR--FDLALAATEARQCSDLLSQAQYHVARARKQDEEERELRAKQEQEKELLRQKLLK 858

Query: 887 EE--ARRKAEEQKKYLLEKR 904
           E+   R + +E++K LLE+R
Sbjct: 859 EQEEKRLREKEEQKKLLEQR 878


>gi|397494694|ref|XP_003818208.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Pan
           paniscus]
 gi|410226238|gb|JAA10338.1| Ctr9, Paf1/RNA polymerase II complex component, homolog [Pan
           troglodytes]
 gi|410259852|gb|JAA17892.1| Ctr9, Paf1/RNA polymerase II complex component, homolog [Pan
           troglodytes]
 gi|410291668|gb|JAA24434.1| Ctr9, Paf1/RNA polymerase II complex component, homolog [Pan
           troglodytes]
 gi|410334835|gb|JAA36364.1| Ctr9, Paf1/RNA polymerase II complex component, homolog [Pan
           troglodytes]
          Length = 1173

 Score =  529 bits (1362), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 331/922 (35%), Positives = 516/922 (55%), Gaps = 66/922 (7%)

Query: 2   ACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQ 61
             + IP+++++E + +  DQLP +  +++ ILK E   L +W+ +A EY+KQGK E+F +
Sbjct: 4   GSIEIPLRDTDEVIELDFDQLP-EGDEVISILKQEHTQLHIWIALALEYYKQGKTEEFVK 62

Query: 62  ILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNK 119
           +LE   +  ID    Y D   +++  L+ L  YY    + E  +  K++    AT  Y  
Sbjct: 63  LLE---AARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNKKDLITQATLLYTM 119

Query: 120 ASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRY 178
           A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+PALLG+AC+ FN+  Y
Sbjct: 120 ADKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPALLGKACISFNKKDY 179

Query: 179 SDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA 238
             +L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF RAL+L+ + V ALV LA
Sbjct: 180 RGALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALELNSKCVGALVGLA 239

Query: 239 VMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVT 298
           V++L   EA  I+ G++ + RA+ I P   M LN+LANHFFF   +  V+ L   A   T
Sbjct: 240 VLELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNT 299

Query: 299 NHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDF 358
                ++ S Y LARS+H + DY++A  YY  + +  +    F+ P++GLGQ+ +  GD 
Sbjct: 300 EVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASSS--FVLPFFGLGQMYIYRGDK 357

Query: 359 RSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKIDPRDAQAFID 415
            +A   FEKVL+ YP+N ET+K LG +Y      EK   A+  L+K  +  P D +A+I+
Sbjct: 358 ENASQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKVTEQYPDDVEAWIE 417

Query: 416 LGELLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDA 474
           L ++L  +D   AL A+ TA R L +K   +VP E+LNN+G +HF  G    A + F   
Sbjct: 418 LAQILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYF--- 474

Query: 475 LGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWN--KVTVLFNLA 532
                 L  LD                        R + +  H E  +N   VT  +NLA
Sbjct: 475 ------LASLD------------------------RAKAEAEHDEHYYNAISVTTSYNLA 504

Query: 533 RLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKY 592
           RL E + +   A  LY+ IL ++ +YVD YLRL A+A+ + N   + +   EAL++N  +
Sbjct: 505 RLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEASDWFKEALQINQDH 564

Query: 593 PNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYFAALRNEKRAPK 651
           P+A S++G+L L   +W   ++ F R     +   D+Y+ L+LGN  +   L    R  +
Sbjct: 565 PDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQSDTYSMLALGNV-WLQTLHQPTRDRE 623

Query: 652 LEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFV 711
            E  H ++A  +Y +V+     NLYAANG G VLA KG F  ++D+F QV+EA +     
Sbjct: 624 KEKRHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHKGYFREARDVFAQVREATA----- 678

Query: 712 QMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKK 771
            + DVW+NLAH+Y  Q  +  A++MY+NCLRKFY + + +++LYLAR  ++  + Q+CK+
Sbjct: 679 DISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVVLYLARALFKCGKLQECKQ 738

Query: 772 SLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSA 831
           +LL+A H+APS+  L F+  + +Q+ + S L+  +    EV + V ELE A R FS+LS 
Sbjct: 739 TLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVLNAVKELELAHRYFSYLSK 798

Query: 832 ASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNR-------QRQEAARQAA 884
             +     FD     T    C  LL  A+ H   A +++++ R       Q +E  RQ  
Sbjct: 799 VGDKMR--FDLALAATEARQCSDLLSQAQYHVARARKQDEEERELRAKQEQEKELLRQKL 856

Query: 885 LAEE--ARRKAEEQKKYLLEKR 904
           L E+   R + +E++K LLE+R
Sbjct: 857 LKEQEEKRLREKEEQKKLLEQR 878


>gi|363734664|ref|XP_420968.3| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Gallus
           gallus]
          Length = 1167

 Score =  529 bits (1362), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 333/922 (36%), Positives = 515/922 (55%), Gaps = 66/922 (7%)

Query: 2   ACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQ 61
             + IP+++++E + +  DQLP +  +++ ILK E   L +W+ +A EY+KQGK E F +
Sbjct: 4   GSIEIPLRDTDEVIELDFDQLP-EGDEVISILKQEHTQLHIWIALALEYYKQGKTEDFVK 62

Query: 62  ILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNK 119
           +LE   +  ID    Y D   +++  L+ L  YY    + E  +  K+E    AT  Y  
Sbjct: 63  LLE---AARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNKKELITQATLLYTM 119

Query: 120 ASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRY 178
           A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+PALLG+AC+ FN+  Y
Sbjct: 120 ADKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPALLGKACISFNKKDY 179

Query: 179 SDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA 238
             +L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF RAL+L+ + V ALV LA
Sbjct: 180 RGALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALELNSKCVGALVGLA 239

Query: 239 VMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVT 298
           V++L   EA  I+ G++ + RA+ I P   M LN+LANHFFF   +  V+ L   A   T
Sbjct: 240 VLELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYGKVQHLALHAFHNT 299

Query: 299 NHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDF 358
                ++ S Y LARS+H + DY++A  YY  + +  +    F+ P++GLGQ+ +  GD 
Sbjct: 300 EVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASSS--FVLPFFGLGQMYIYRGDK 357

Query: 359 RSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKIDPRDAQAFID 415
            +A   FEKVL+ YP+N ET+K LG +Y      EK   A+  L+K  +  P D +A+I+
Sbjct: 358 ENASQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKVTEQYPDDVEAWIE 417

Query: 416 LGELLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDA 474
           L ++L  +D   AL A+ TA R L +K   +VP E+LNN+G +HF  G    A + F   
Sbjct: 418 LAQILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYF--- 474

Query: 475 LGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWN--KVTVLFNLA 532
                 L  LD                        R + +  H E  +N   VT  +NLA
Sbjct: 475 ------LASLD------------------------RAKAEAEHDEHYYNAISVTTSYNLA 504

Query: 533 RLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKY 592
           RL E + +   A  LY+ IL ++ +YVD YLRL A+A+ + N   + +   EAL++N  +
Sbjct: 505 RLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEASDWFKEALQINQDH 564

Query: 593 PNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYFAALRNEKRAPK 651
           P+A S++G+L L   +W   ++ F R     +   D+Y+ L+LGN  +   L    R  +
Sbjct: 565 PDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQNDTYSMLALGNV-WLQTLHQPTRDRE 623

Query: 652 LEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFV 711
            E  H ++A  +Y +V+     NLYAANG G VLA KG F  ++D+F QV+EA +     
Sbjct: 624 KEKRHQDRALAIYKQVLRNDPKNLYAANGIGAVLAHKGYFREARDVFAQVREATA----- 678

Query: 712 QMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKK 771
            + DVW+NLAH+Y  Q  +  A++MY+NCLRKFY + + ++LLYLAR  ++  + Q+CK+
Sbjct: 679 DISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVLLYLARALFKCGKLQECKQ 738

Query: 772 SLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSA 831
           +LL+A H+APS+  L F+  + +Q+ + S L+  +    EV + V ELE A R FS+LS 
Sbjct: 739 TLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVLNAVKELELAHRYFSYLSK 798

Query: 832 ASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNR-------QRQEAARQAA 884
             +     FD     T    C  LL  A+ H   A +++++ R       Q +E  RQ  
Sbjct: 799 VGDKMR--FDLALAATEARQCSDLLSQAQYHVARARKQDEEERELRAKQEQEKELLRQKL 856

Query: 885 LAEE--ARRKAEEQKKYLLEKR 904
           L E+   R + +E++K LLE+R
Sbjct: 857 LKEQEEKRLREKEEQKKLLEQR 878


>gi|116283952|gb|AAH24749.1| Ctr9 protein [Mus musculus]
          Length = 936

 Score =  529 bits (1362), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 329/919 (35%), Positives = 514/919 (55%), Gaps = 64/919 (6%)

Query: 4   VYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQIL 63
           + IP+++++E + +  DQLP +  +++ ILK E   L +W+ +A EY+KQGK E+F ++L
Sbjct: 6   IEIPLRDTDEVIELDFDQLP-EGDEVISILKQEHTQLHIWIALALEYYKQGKTEEFVKLL 64

Query: 64  EEGS-SPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASR 122
           E       +D  Y D   +++  L+ L  YY    + E  +  K++    AT  Y  A +
Sbjct: 65  EAARIDGNLD--YRDHEKDQMTCLDTLAAYYVQQARKEKNKDNKKDLITQATLLYTMADK 122

Query: 123 IDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDS 181
           I M++ +  +G+    L +G+ ++QA + F  VL    +N+PALLG+AC+ FN+  Y  +
Sbjct: 123 IIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPALLGKACISFNKKDYRGA 182

Query: 182 LEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMD 241
           L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF RAL+L+ + V ALV LAV++
Sbjct: 183 LAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALELNSKCVGALVGLAVLE 242

Query: 242 LQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG 301
           L   EA  I+ G++ + RA+ I P   M LN+LANHFFF   +  V+ L   A   T   
Sbjct: 243 LNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNTEVE 302

Query: 302 PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSA 361
             ++ S Y LARS+H + DY++A  YY  + +  +    F+ P++GLGQ+ +  GD  +A
Sbjct: 303 AMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASSS--FVLPFFGLGQMYIYRGDKENA 360

Query: 362 LTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKIDPRDAQAFIDLGE 418
              FEKVL+ YP+N ET+K LG +Y      EK   A+  L+K  +  P D +A+I+L +
Sbjct: 361 SQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKVTEQYPDDVEAWIELAQ 420

Query: 419 LLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGD 477
           +L  +D   AL A+ TA R L +K   +VP E+LNN+G +HF  G    A + F      
Sbjct: 421 ILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYF------ 474

Query: 478 GIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWN--KVTVLFNLARLL 535
              L  LD                        R + +  H E  +N   VT  +NLARL 
Sbjct: 475 ---LASLD------------------------RAKAEAEHDEHYYNAISVTTSYNLARLY 507

Query: 536 EQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNA 595
           E + +   A  LY+ IL ++ +YVD YLRL A+A+ + N   + +   EAL++N  +P+A
Sbjct: 508 EAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEASDWFKEALQINQDHPDA 567

Query: 596 LSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEA 654
            S++G+L L   +W   ++ F R         D+Y+ L+LGN  +   L    R  + E 
Sbjct: 568 WSLIGNLHLAKQEWGPGQKKFERILKQPATQSDTYSMLALGNV-WLQTLHQPTRDREKEK 626

Query: 655 THLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMP 714
            H ++A  +Y +V+     NLYAANG G VLA KG F  ++D+F QV+EA +      + 
Sbjct: 627 RHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHKGYFREARDVFAQVREATAD-----IS 681

Query: 715 DVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLL 774
           DVW+NLAH+Y  Q  +  A++MY+NCLRKFY + + +++LYLAR  ++  + Q+CK++LL
Sbjct: 682 DVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVVLYLARALFKCGKLQECKQTLL 741

Query: 775 RAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASN 834
           +A H+APS+  L F+  + +Q+ + S L+  +    EV + V ELE A R FS+LS   +
Sbjct: 742 KARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVLNAVKELELAHRYFSYLSKVGD 801

Query: 835 LHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNR-------QRQEAARQAALAE 887
                FD     +    C  LL  A+ H   A +++++ R       Q +E  RQ  L E
Sbjct: 802 --KMRFDLALAASEARQCSDLLSQAQYHVARARKQDEEERELRAKQEQEKELLRQKLLKE 859

Query: 888 E--ARRKAEEQKKYLLEKR 904
           +   R + +E++K LLE+R
Sbjct: 860 QEEKRLREKEEQKKLLEQR 878


>gi|332211777|ref|XP_003254990.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Nomascus
           leucogenys]
          Length = 1173

 Score =  529 bits (1362), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 331/922 (35%), Positives = 516/922 (55%), Gaps = 66/922 (7%)

Query: 2   ACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQ 61
             + IP+++++E + +  DQLP +  +++ ILK E   L +W+ +A EY+KQGK E+F +
Sbjct: 4   GSIEIPLRDTDEVIELDFDQLP-EGDEVISILKQEHTQLHIWIALALEYYKQGKTEEFVK 62

Query: 62  ILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNK 119
           +LE   +  ID    Y D   +++  L+ L  YY    + E  +  K++    AT  Y  
Sbjct: 63  LLE---AARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNKKDLITQATLLYTM 119

Query: 120 ASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRY 178
           A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+PALLG+AC+ FN+  Y
Sbjct: 120 ADKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPALLGKACISFNKKDY 179

Query: 179 SDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA 238
             +L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF RAL+L+ + V ALV LA
Sbjct: 180 RGALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALELNSKCVGALVGLA 239

Query: 239 VMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVT 298
           V++L   EA  I+ G++ + RA+ I P   M LN+LANHFFF   +  V+ L   A   T
Sbjct: 240 VLELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNT 299

Query: 299 NHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDF 358
                ++ S Y LARS+H + DY++A  YY  + +  +    F+ P++GLGQ+ +  GD 
Sbjct: 300 EVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASSS--FVLPFFGLGQMYIYRGDK 357

Query: 359 RSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKIDPRDAQAFID 415
            +A   FEKVL+ YP+N ET+K LG +Y      EK   A+  L+K  +  P D +A+I+
Sbjct: 358 ENASQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKVTEQYPDDVEAWIE 417

Query: 416 LGELLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDA 474
           L ++L  +D   AL A+ TA R L +K   +VP E+LNN+G +HF  G    A + F   
Sbjct: 418 LAQILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYF--- 474

Query: 475 LGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWN--KVTVLFNLA 532
                 L  LD                        R + +  H E  +N   VT  +NLA
Sbjct: 475 ------LASLD------------------------RAKAEAEHDEHYYNAISVTTSYNLA 504

Query: 533 RLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKY 592
           RL E + +   A  LY+ IL ++ +YVD YLRL A+A+ + N   + +   EAL++N  +
Sbjct: 505 RLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEASDWFKEALQINQDH 564

Query: 593 PNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYFAALRNEKRAPK 651
           P+A S++G+L L   +W   ++ F R     +   D+Y+ L+LGN  +   L    R  +
Sbjct: 565 PDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQSDTYSMLALGNV-WLQTLHQPTRDRE 623

Query: 652 LEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFV 711
            E  H ++A  +Y +V+     NLYAANG G VLA KG F  ++D+F QV+EA +     
Sbjct: 624 KEKRHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHKGYFREARDVFAQVREATA----- 678

Query: 712 QMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKK 771
            + DVW+NLAH+Y  Q  +  A++MY+NCLRKFY + + +++LYLAR  ++  + Q+CK+
Sbjct: 679 DISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVVLYLARALFKCGKLQECKQ 738

Query: 772 SLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSA 831
           +LL+A H+APS+  L F+  + +Q+ + S L+  +    EV + V ELE A R FS+LS 
Sbjct: 739 TLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVLNAVKELELAHRYFSYLSK 798

Query: 832 ASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNR-------QRQEAARQAA 884
             +     FD     T    C  LL  A+ H   A +++++ R       Q +E  RQ  
Sbjct: 799 VGDKMR--FDLALAATEARQCSDLLSQAQYHVARARKQDEEERELRAKQEQEKELLRQKL 856

Query: 885 LAEE--ARRKAEEQKKYLLEKR 904
           L E+   R + +E++K LLE+R
Sbjct: 857 LKEQEEKRLREKEEQKKLLEQR 878


>gi|402894228|ref|XP_003910271.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Papio
           anubis]
          Length = 1173

 Score =  529 bits (1362), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 331/922 (35%), Positives = 516/922 (55%), Gaps = 66/922 (7%)

Query: 2   ACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQ 61
             + IP+++++E + +  DQLP +  +++ ILK E   L +W+ +A EY+KQGK E+F +
Sbjct: 4   GSIEIPLRDTDEVIELDFDQLP-EGDEVISILKQEHTQLHIWIALALEYYKQGKTEEFVK 62

Query: 62  ILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNK 119
           +LE   +  ID    Y D   +++  L+ L  YY    + E  +  K++    AT  Y  
Sbjct: 63  LLE---AARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNKKDLITQATLLYTM 119

Query: 120 ASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRY 178
           A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+PALLG+AC+ FN+  Y
Sbjct: 120 ADKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPALLGKACISFNKKDY 179

Query: 179 SDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA 238
             +L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF RAL+L+ + V ALV LA
Sbjct: 180 RGALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALELNSKCVGALVGLA 239

Query: 239 VMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVT 298
           V++L   EA  I+ G++ + RA+ I P   M LN+LANHFFF   +  V+ L   A   T
Sbjct: 240 VLELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNT 299

Query: 299 NHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDF 358
                ++ S Y LARS+H + DY++A  YY  + +  +    F+ P++GLGQ+ +  GD 
Sbjct: 300 EVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASS--SFVLPFFGLGQMYIYRGDK 357

Query: 359 RSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKIDPRDAQAFID 415
            +A   FEKVL+ YP+N ET+K LG +Y      EK   A+  L+K  +  P D +A+I+
Sbjct: 358 ENASQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKVTEQYPDDVEAWIE 417

Query: 416 LGELLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDA 474
           L ++L  +D   AL A+ TA R L +K   +VP E+LNN+G +HF  G    A + F   
Sbjct: 418 LAQILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYF--- 474

Query: 475 LGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWN--KVTVLFNLA 532
                 L  LD                        R + +  H E  +N   VT  +NLA
Sbjct: 475 ------LASLD------------------------RAKAEAEHDEHYYNAISVTTSYNLA 504

Query: 533 RLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKY 592
           RL E + +   A  LY+ IL ++ +YVD YLRL A+A+ + N   + +   EAL++N  +
Sbjct: 505 RLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEASDWFKEALQINQDH 564

Query: 593 PNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYFAALRNEKRAPK 651
           P+A S++G+L L   +W   ++ F R     +   D+Y+ L+LGN  +   L    R  +
Sbjct: 565 PDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQSDTYSMLALGNV-WLQTLHQPTRDRE 623

Query: 652 LEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFV 711
            E  H ++A  +Y +V+     NLYAANG G VLA KG F  ++D+F QV+EA +     
Sbjct: 624 KEKRHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHKGYFREARDVFAQVREATA----- 678

Query: 712 QMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKK 771
            + DVW+NLAH+Y  Q  +  A++MY+NCLRKFY + + +++LYLAR  ++  + Q+CK+
Sbjct: 679 DISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVVLYLARALFKCGKLQECKQ 738

Query: 772 SLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSA 831
           +LL+A H+APS+  L F+  + +Q+ + S L+  +    EV + V ELE A R FS+LS 
Sbjct: 739 TLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVLNAVKELELAHRYFSYLSK 798

Query: 832 ASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNR-------QRQEAARQAA 884
             +     FD     T    C  LL  A+ H   A +++++ R       Q +E  RQ  
Sbjct: 799 VGDKMR--FDLALAATEARQCSDLLSQAQYHVARARKQDEEERELRAKQEQEKELLRQKL 856

Query: 885 LAEE--ARRKAEEQKKYLLEKR 904
           L E+   R + +E++K LLE+R
Sbjct: 857 LKEQEEKRLREKEEQKKLLEQR 878


>gi|326919998|ref|XP_003206263.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog
           [Meleagris gallopavo]
          Length = 1167

 Score =  529 bits (1362), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 333/922 (36%), Positives = 515/922 (55%), Gaps = 66/922 (7%)

Query: 2   ACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQ 61
             + IP+++++E + +  DQLP +  +++ ILK E   L +W+ +A EY+KQGK E F +
Sbjct: 4   GSIEIPLRDTDEVIELDFDQLP-EGDEVISILKQEHTQLHIWIALALEYYKQGKTEDFVK 62

Query: 62  ILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNK 119
           +LE   +  ID    Y D   +++  L+ L  YY    + E  +  K+E    AT  Y  
Sbjct: 63  LLE---AARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNKKELITQATLLYTM 119

Query: 120 ASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRY 178
           A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+PALLG+AC+ FN+  Y
Sbjct: 120 ADKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPALLGKACISFNKKDY 179

Query: 179 SDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA 238
             +L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF RAL+L+ + V ALV LA
Sbjct: 180 RGALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALELNSKCVGALVGLA 239

Query: 239 VMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVT 298
           V++L   EA  I+ G++ + RA+ I P   M LN+LANHFFF   +  V+ L   A   T
Sbjct: 240 VLELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYGKVQHLALHAFHNT 299

Query: 299 NHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDF 358
                ++ S Y LARS+H + DY++A  YY  + +  +    F+ P++GLGQ+ +  GD 
Sbjct: 300 EVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASSS--FVLPFFGLGQMYIYRGDK 357

Query: 359 RSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKIDPRDAQAFID 415
            +A   FEKVL+ YP+N ET+K LG +Y      EK   A+  L+K  +  P D +A+I+
Sbjct: 358 ENASQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKVTEQYPDDVEAWIE 417

Query: 416 LGELLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDA 474
           L ++L  +D   AL A+ TA R L +K   +VP E+LNN+G +HF  G    A + F   
Sbjct: 418 LAQILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYF--- 474

Query: 475 LGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWN--KVTVLFNLA 532
                 L  LD                        R + +  H E  +N   VT  +NLA
Sbjct: 475 ------LASLD------------------------RAKAEAEHDEHYYNAISVTTSYNLA 504

Query: 533 RLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKY 592
           RL E + +   A  LY+ IL ++ +YVD YLRL A+A+ + N   + +   EAL++N  +
Sbjct: 505 RLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEASDWFKEALQINQDH 564

Query: 593 PNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYFAALRNEKRAPK 651
           P+A S++G+L L   +W   ++ F R     +   D+Y+ L+LGN  +   L    R  +
Sbjct: 565 PDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQNDTYSMLALGNV-WLQTLHQPTRDRE 623

Query: 652 LEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFV 711
            E  H ++A  +Y +V+     NLYAANG G VLA KG F  ++D+F QV+EA +     
Sbjct: 624 KEKRHQDRALAIYKQVLRNDPKNLYAANGIGAVLAHKGYFREARDVFAQVREATA----- 678

Query: 712 QMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKK 771
            + DVW+NLAH+Y  Q  +  A++MY+NCLRKFY + + ++LLYLAR  ++  + Q+CK+
Sbjct: 679 DISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVLLYLARALFKCGKLQECKQ 738

Query: 772 SLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSA 831
           +LL+A H+APS+  L F+  + +Q+ + S L+  +    EV + V ELE A R FS+LS 
Sbjct: 739 TLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVLNAVKELELAHRYFSYLSK 798

Query: 832 ASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNR-------QRQEAARQAA 884
             +     FD     T    C  LL  A+ H   A +++++ R       Q +E  RQ  
Sbjct: 799 VGDKMR--FDLALAATEARQCSDLLSQAQYHVARARKQDEEERELRAKQEQEKELLRQKL 856

Query: 885 LAEE--ARRKAEEQKKYLLEKR 904
           L E+   R + +E++K LLE+R
Sbjct: 857 LKEQEEKRLREKEEQKKLLEQR 878


>gi|355681626|gb|AER96805.1| Ctr9, Paf1/RNA polymerase II complex component,-like protein
           [Mustela putorius furo]
          Length = 1172

 Score =  529 bits (1362), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 331/922 (35%), Positives = 516/922 (55%), Gaps = 66/922 (7%)

Query: 2   ACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQ 61
             + IP+++++E + +  DQLP +  +++ ILK E   L +W+ +A EY+KQGK E+F +
Sbjct: 4   GSIEIPLRDTDEVIELDFDQLP-EGDEVISILKQEHTQLHIWIALALEYYKQGKTEEFVK 62

Query: 62  ILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNK 119
           +LE   +  ID    Y D   +++  L+ L  YY    + E  +  K++    AT  Y  
Sbjct: 63  LLE---AARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNKKDLITQATLLYTM 119

Query: 120 ASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRY 178
           A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+PALLG+AC+ FN+  Y
Sbjct: 120 ADKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPALLGKACISFNKKDY 179

Query: 179 SDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA 238
             +L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF RAL+L+ + V ALV LA
Sbjct: 180 RGALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALELNSKCVGALVGLA 239

Query: 239 VMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVT 298
           V++L   EA  I+ G++ + RA+ I P   M LN+LANHFFF   +  V+ L   A   T
Sbjct: 240 VLELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNT 299

Query: 299 NHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDF 358
                ++ S Y LARS+H + DY++A  YY  + +  +    F+ P++GLGQ+ +  GD 
Sbjct: 300 EVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASS--SFVLPFFGLGQMYIYRGDK 357

Query: 359 RSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKIDPRDAQAFID 415
            +A   FEKVL+ YP+N ET+K LG +Y      EK   A+  L+K  +  P D +A+I+
Sbjct: 358 ENASQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKVTEQYPDDVEAWIE 417

Query: 416 LGELLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDA 474
           L ++L  +D   AL A+ TA R L +K   +VP E+LNN+G +HF  G    A + F   
Sbjct: 418 LAQILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYF--- 474

Query: 475 LGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWN--KVTVLFNLA 532
                 L  LD                        R + +  H E  +N   VT  +NLA
Sbjct: 475 ------LASLD------------------------RAKAEAEHDEHYYNAISVTTSYNLA 504

Query: 533 RLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKY 592
           RL E + +   A  LY+ IL ++ +YVD YLRL A+A+ + N   + +   EAL++N  +
Sbjct: 505 RLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEASDWFKEALQINQDH 564

Query: 593 PNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYFAALRNEKRAPK 651
           P+A S++G+L L   +W   ++ F R     +   D+Y+ L+LGN  +   L    R  +
Sbjct: 565 PDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQSDTYSMLALGNV-WLQTLHQPTRDRE 623

Query: 652 LEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFV 711
            E  H ++A  +Y +V+     NLYAANG G VLA KG F  ++D+F QV+EA +     
Sbjct: 624 KEKRHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHKGYFREARDVFAQVREATA----- 678

Query: 712 QMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKK 771
            + DVW+NLAH+Y  Q  +  A++MY+NCLRKFY + + +++LYLAR  ++  + Q+CK+
Sbjct: 679 DISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVVLYLARALFKCGKLQECKQ 738

Query: 772 SLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSA 831
           +LL+A H+APS+  L F+  + +Q+ + S L+  +    EV + V ELE A R FS+LS 
Sbjct: 739 TLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVLNAVKELELAHRYFSYLSK 798

Query: 832 ASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNR-------QRQEAARQAA 884
             +     FD     T    C  LL  A+ H   A +++++ R       Q +E  RQ  
Sbjct: 799 VGDKMR--FDLALAATEARQCSDLLSQAQYHVARARKQDEEERELRAKQEQEKELLRQKL 856

Query: 885 LAEE--ARRKAEEQKKYLLEKR 904
           L E+   R + +E++K LLE+R
Sbjct: 857 LKEQEEKRLREKEEQKKLLEQR 878


>gi|351705109|gb|EHB08028.1| RNA polymerase-associated protein CTR9-like protein [Heterocephalus
           glaber]
          Length = 1179

 Score =  529 bits (1362), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 331/922 (35%), Positives = 516/922 (55%), Gaps = 66/922 (7%)

Query: 2   ACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQ 61
             + IP+++++E + +  DQLP +  +++ ILK E   L +W+ +A EY+KQGK E+F +
Sbjct: 4   GSIEIPLRDTDEVIELDFDQLP-EGDEVISILKQEHTQLHIWIALALEYYKQGKTEEFVK 62

Query: 62  ILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNK 119
           +LE   +  ID    Y D   +++  L+ L  YY    + E  +  K++    AT  Y  
Sbjct: 63  LLE---AARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNKKDLITQATLLYTM 119

Query: 120 ASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRY 178
           A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+PALLG+AC+ FN+  Y
Sbjct: 120 ADKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPALLGKACISFNKKDY 179

Query: 179 SDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA 238
             +L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF RAL+L+ + V ALV LA
Sbjct: 180 RGALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALELNSKCVGALVGLA 239

Query: 239 VMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVT 298
           V++L   EA  I+ G++ + RA+ I P   M LN+LANHFFF   +  V+ L   A   T
Sbjct: 240 VLELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNT 299

Query: 299 NHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDF 358
                ++ S Y LARS+H + DY++A  YY  + +  +    F+ P++GLGQ+ +  GD 
Sbjct: 300 EVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASS--SFVLPFFGLGQMYIYRGDK 357

Query: 359 RSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKIDPRDAQAFID 415
            +A   FEKVL+ YP+N ET+K LG +Y      EK   A+  L+K  +  P D +A+I+
Sbjct: 358 ENASQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKVTEQYPDDVEAWIE 417

Query: 416 LGELLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDA 474
           L ++L  +D   AL A+ TA R L +K   +VP E+LNN+G +HF  G    A + F   
Sbjct: 418 LAQILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYF--- 474

Query: 475 LGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWN--KVTVLFNLA 532
                 L  LD                        R + +  H E  +N   VT  +NLA
Sbjct: 475 ------LASLD------------------------RAKAEAEHDEHYYNAISVTTSYNLA 504

Query: 533 RLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKY 592
           RL E + +   A  LY+ IL ++ +YVD YLRL A+A+ + N   + +   EAL++N  +
Sbjct: 505 RLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEASDWFKEALQINQDH 564

Query: 593 PNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYFAALRNEKRAPK 651
           P+A S++G+L L   +W   ++ F R     +   D+Y+ L+LGN  +   L    R  +
Sbjct: 565 PDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQSDTYSMLALGNV-WLQTLHQPTRDRE 623

Query: 652 LEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFV 711
            E  H ++A  +Y +V+     NLYAANG G VLA KG F  ++D+F QV+EA +     
Sbjct: 624 KEKRHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHKGYFREARDVFAQVREATA----- 678

Query: 712 QMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKK 771
            + DVW+NLAH+Y  Q  +  A++MY+NCLRKFY + + +++LYLAR  ++  + Q+CK+
Sbjct: 679 DISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVVLYLARALFKCGKLQECKQ 738

Query: 772 SLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSA 831
           +LL+A H+APS+  L F+  + +Q+ + S L+  +    EV + V ELE A R FS+LS 
Sbjct: 739 TLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVLNAVKELELAHRSFSYLSK 798

Query: 832 ASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNR-------QRQEAARQAA 884
             +     FD     T    C  LL  A+ H   A +++++ R       Q +E  RQ  
Sbjct: 799 VGDKMR--FDLALAATEARQCSDLLSQAQYHVARARKQDEEERELRAKQEQEKELLRQKL 856

Query: 885 LAEE--ARRKAEEQKKYLLEKR 904
           L E+   R + +E++K LLE+R
Sbjct: 857 LKEQEEKRLREKEEQKKLLEQR 878


>gi|40788884|dbj|BAA09925.2| KIAA0155 [Homo sapiens]
          Length = 1195

 Score =  528 bits (1361), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 331/922 (35%), Positives = 516/922 (55%), Gaps = 66/922 (7%)

Query: 2   ACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQ 61
             + IP+++++E + +  DQLP +  +++ ILK E   L +W+ +A EY+KQGK E+F +
Sbjct: 26  GSIEIPLRDTDEVIELDFDQLP-EGDEVISILKQEHTQLHIWIALALEYYKQGKTEEFVK 84

Query: 62  ILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNK 119
           +LE   +  ID    Y D   +++  L+ L  YY    + E  +  K++    AT  Y  
Sbjct: 85  LLE---AARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNKKDLITQATLLYTM 141

Query: 120 ASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRY 178
           A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+PALLG+AC+ FN+  Y
Sbjct: 142 ADKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPALLGKACISFNKKDY 201

Query: 179 SDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA 238
             +L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF RAL+L+ + V ALV LA
Sbjct: 202 RGALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALELNSKCVGALVGLA 261

Query: 239 VMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVT 298
           V++L   EA  I+ G++ + RA+ I P   M LN+LANHFFF   +  V+ L   A   T
Sbjct: 262 VLELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNT 321

Query: 299 NHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDF 358
                ++ S Y LARS+H + DY++A  YY  + +  +    F+ P++GLGQ+ +  GD 
Sbjct: 322 EVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASS--SFVLPFFGLGQMYIYRGDK 379

Query: 359 RSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKIDPRDAQAFID 415
            +A   FEKVL+ YP+N ET+K LG +Y      EK   A+  L+K  +  P D +A+I+
Sbjct: 380 ENASQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKVTEQYPDDVEAWIE 439

Query: 416 LGELLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDA 474
           L ++L  +D   AL A+ TA R L +K   +VP E+LNN+G +HF  G    A + F   
Sbjct: 440 LAQILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYF--- 496

Query: 475 LGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWN--KVTVLFNLA 532
                 L  LD                        R + +  H E  +N   VT  +NLA
Sbjct: 497 ------LASLD------------------------RAKAEAEHDEHYYNAISVTTSYNLA 526

Query: 533 RLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKY 592
           RL E + +   A  LY+ IL ++ +YVD YLRL A+A+ + N   + +   EAL++N  +
Sbjct: 527 RLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEASDWFKEALQINQDH 586

Query: 593 PNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYFAALRNEKRAPK 651
           P+A S++G+L L   +W   ++ F R     +   D+Y+ L+LGN  +   L    R  +
Sbjct: 587 PDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQSDTYSMLALGNV-WLQTLHQPTRDRE 645

Query: 652 LEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFV 711
            E  H ++A  +Y +V+     NLYAANG G VLA KG F  ++D+F QV+EA +     
Sbjct: 646 KEKRHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHKGYFREARDVFAQVREATA----- 700

Query: 712 QMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKK 771
            + DVW+NLAH+Y  Q  +  A++MY+NCLRKFY + + +++LYLAR  ++  + Q+CK+
Sbjct: 701 DISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVVLYLARALFKCGKLQECKQ 760

Query: 772 SLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSA 831
           +LL+A H+APS+  L F+  + +Q+ + S L+  +    EV + V ELE A R FS+LS 
Sbjct: 761 TLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVLNAVKELELAHRYFSYLSK 820

Query: 832 ASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNR-------QRQEAARQAA 884
             +     FD     T    C  LL  A+ H   A +++++ R       Q +E  RQ  
Sbjct: 821 VGDKMR--FDLALAATEARQCSDLLSQAQYHVARARKQDEEERELRAKQEQEKELLRQKL 878

Query: 885 LAEE--ARRKAEEQKKYLLEKR 904
           L E+   R + +E++K LLE+R
Sbjct: 879 LKEQEEKRLREKEEQKKLLEQR 900


>gi|355566722|gb|EHH23101.1| SH2 domain-binding protein 1 [Macaca mulatta]
 gi|355752325|gb|EHH56445.1| SH2 domain-binding protein 1 [Macaca fascicularis]
 gi|380818264|gb|AFE81006.1| RNA polymerase-associated protein CTR9 homolog [Macaca mulatta]
 gi|383423099|gb|AFH34763.1| RNA polymerase-associated protein CTR9 homolog [Macaca mulatta]
          Length = 1173

 Score =  528 bits (1361), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 331/922 (35%), Positives = 516/922 (55%), Gaps = 66/922 (7%)

Query: 2   ACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQ 61
             + IP+++++E + +  DQLP +  +++ ILK E   L +W+ +A EY+KQGK E+F +
Sbjct: 4   GSIEIPLRDTDEVIELDFDQLP-EGDEVISILKQEHTQLHIWIALALEYYKQGKTEEFVK 62

Query: 62  ILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNK 119
           +LE   +  ID    Y D   +++  L+ L  YY    + E  +  K++    AT  Y  
Sbjct: 63  LLE---AARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNKKDLITQATLLYTM 119

Query: 120 ASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRY 178
           A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+PALLG+AC+ FN+  Y
Sbjct: 120 ADKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPALLGKACISFNKKDY 179

Query: 179 SDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA 238
             +L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF RAL+L+ + V ALV LA
Sbjct: 180 RGALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALELNSKCVGALVGLA 239

Query: 239 VMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVT 298
           V++L   EA  I+ G++ + RA+ I P   M LN+LANHFFF   +  V+ L   A   T
Sbjct: 240 VLELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNT 299

Query: 299 NHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDF 358
                ++ S Y LARS+H + DY++A  YY  + +  +    F+ P++GLGQ+ +  GD 
Sbjct: 300 EVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASS--SFVLPFFGLGQMYIYRGDK 357

Query: 359 RSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKIDPRDAQAFID 415
            +A   FEKVL+ YP+N ET+K LG +Y      EK   A+  L+K  +  P D +A+I+
Sbjct: 358 ENASQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKVTEQYPDDVEAWIE 417

Query: 416 LGELLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDA 474
           L ++L  +D   AL A+ TA R L +K   +VP E+LNN+G +HF  G    A + F   
Sbjct: 418 LAQILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYF--- 474

Query: 475 LGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWN--KVTVLFNLA 532
                 L  LD                        R + +  H E  +N   VT  +NLA
Sbjct: 475 ------LASLD------------------------RAKAEAEHDEHYYNAISVTTSYNLA 504

Query: 533 RLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKY 592
           RL E + +   A  LY+ IL ++ +YVD YLRL A+A+ + N   + +   EAL++N  +
Sbjct: 505 RLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEASDWFKEALQINQDH 564

Query: 593 PNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYFAALRNEKRAPK 651
           P+A S++G+L L   +W   ++ F R     +   D+Y+ L+LGN  +   L    R  +
Sbjct: 565 PDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQSDTYSMLALGNV-WLQTLHQPTRDRE 623

Query: 652 LEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFV 711
            E  H ++A  +Y +V+     NLYAANG G VLA KG F  ++D+F QV+EA +     
Sbjct: 624 KEKRHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHKGYFREARDVFAQVREATA----- 678

Query: 712 QMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKK 771
            + DVW+NLAH+Y  Q  +  A++MY+NCLRKFY + + +++LYLAR  ++  + Q+CK+
Sbjct: 679 DISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVVLYLARALFKCGKLQECKQ 738

Query: 772 SLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSA 831
           +LL+A H+APS+  L F+  + +Q+ + S L+  +    EV + V ELE A R FS+LS 
Sbjct: 739 TLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVLNAVKELELAHRYFSYLSK 798

Query: 832 ASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNR-------QRQEAARQAA 884
             +     FD     T    C  LL  A+ H   A +++++ R       Q +E  RQ  
Sbjct: 799 VGDKMR--FDLALAATEARQCSDLLSQAQYHVARARKQDEEERELRAKQEQEKELLRQKL 856

Query: 885 LAEE--ARRKAEEQKKYLLEKR 904
           L E+   R + +E++K LLE+R
Sbjct: 857 LKEQEEKRLREKEEQKKLLEQR 878


>gi|7661950|ref|NP_055448.1| RNA polymerase-associated protein CTR9 homolog [Homo sapiens]
 gi|74758318|sp|Q6PD62.1|CTR9_HUMAN RecName: Full=RNA polymerase-associated protein CTR9 homolog;
           AltName: Full=SH2 domain-binding protein 1
 gi|37590626|gb|AAH58914.1| Ctr9, Paf1/RNA polymerase II complex component, homolog (S.
           cerevisiae) [Homo sapiens]
 gi|119588963|gb|EAW68557.1| SH2 domain binding protein 1 (tetratricopeptide repeat containing),
           isoform CRA_a [Homo sapiens]
 gi|119588964|gb|EAW68558.1| SH2 domain binding protein 1 (tetratricopeptide repeat containing),
           isoform CRA_a [Homo sapiens]
 gi|168274418|dbj|BAG09629.1| RNA polymerase-associated protein CTR9 homolog [synthetic
           construct]
          Length = 1173

 Score =  528 bits (1361), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 331/922 (35%), Positives = 516/922 (55%), Gaps = 66/922 (7%)

Query: 2   ACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQ 61
             + IP+++++E + +  DQLP +  +++ ILK E   L +W+ +A EY+KQGK E+F +
Sbjct: 4   GSIEIPLRDTDEVIELDFDQLP-EGDEVISILKQEHTQLHIWIALALEYYKQGKTEEFVK 62

Query: 62  ILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNK 119
           +LE   +  ID    Y D   +++  L+ L  YY    + E  +  K++    AT  Y  
Sbjct: 63  LLE---AARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNKKDLITQATLLYTM 119

Query: 120 ASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRY 178
           A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+PALLG+AC+ FN+  Y
Sbjct: 120 ADKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPALLGKACISFNKKDY 179

Query: 179 SDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA 238
             +L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF RAL+L+ + V ALV LA
Sbjct: 180 RGALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALELNSKCVGALVGLA 239

Query: 239 VMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVT 298
           V++L   EA  I+ G++ + RA+ I P   M LN+LANHFFF   +  V+ L   A   T
Sbjct: 240 VLELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNT 299

Query: 299 NHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDF 358
                ++ S Y LARS+H + DY++A  YY  + +  +    F+ P++GLGQ+ +  GD 
Sbjct: 300 EVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASSS--FVLPFFGLGQMYIYRGDK 357

Query: 359 RSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKIDPRDAQAFID 415
            +A   FEKVL+ YP+N ET+K LG +Y      EK   A+  L+K  +  P D +A+I+
Sbjct: 358 ENASQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKVTEQYPDDVEAWIE 417

Query: 416 LGELLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDA 474
           L ++L  +D   AL A+ TA R L +K   +VP E+LNN+G +HF  G    A + F   
Sbjct: 418 LAQILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYF--- 474

Query: 475 LGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWN--KVTVLFNLA 532
                 L  LD                        R + +  H E  +N   VT  +NLA
Sbjct: 475 ------LASLD------------------------RAKAEAEHDEHYYNAISVTTSYNLA 504

Query: 533 RLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKY 592
           RL E + +   A  LY+ IL ++ +YVD YLRL A+A+ + N   + +   EAL++N  +
Sbjct: 505 RLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEASDWFKEALQINQDH 564

Query: 593 PNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYFAALRNEKRAPK 651
           P+A S++G+L L   +W   ++ F R     +   D+Y+ L+LGN  +   L    R  +
Sbjct: 565 PDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQSDTYSMLALGNV-WLQTLHQPTRDRE 623

Query: 652 LEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFV 711
            E  H ++A  +Y +V+     NLYAANG G VLA KG F  ++D+F QV+EA +     
Sbjct: 624 KEKRHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHKGYFREARDVFAQVREATA----- 678

Query: 712 QMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKK 771
            + DVW+NLAH+Y  Q  +  A++MY+NCLRKFY + + +++LYLAR  ++  + Q+CK+
Sbjct: 679 DISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVVLYLARALFKCGKLQECKQ 738

Query: 772 SLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSA 831
           +LL+A H+APS+  L F+  + +Q+ + S L+  +    EV + V ELE A R FS+LS 
Sbjct: 739 TLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVLNAVKELELAHRYFSYLSK 798

Query: 832 ASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNR-------QRQEAARQAA 884
             +     FD     T    C  LL  A+ H   A +++++ R       Q +E  RQ  
Sbjct: 799 VGDKMR--FDLALAATEARQCSDLLSQAQYHVARARKQDEEERELRAKQEQEKELLRQKL 856

Query: 885 LAEE--ARRKAEEQKKYLLEKR 904
           L E+   R + +E++K LLE+R
Sbjct: 857 LKEQEEKRLREKEEQKKLLEQR 878


>gi|329663840|ref|NP_001192326.1| RNA polymerase-associated protein CTR9 homolog [Bos taurus]
          Length = 1173

 Score =  528 bits (1361), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 331/922 (35%), Positives = 515/922 (55%), Gaps = 66/922 (7%)

Query: 2   ACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQ 61
             + IP+++++E + +  DQLP +  +++ ILK E   L +W+ +A EY+KQGK E+F +
Sbjct: 4   GSIEIPLRDTDEVIELDFDQLP-EGDEVISILKQEHTQLHIWIALALEYYKQGKTEEFVK 62

Query: 62  ILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNK 119
           +LE   +  ID    Y D   +++  L+ L  YY    + E  +  K++    AT  Y  
Sbjct: 63  LLE---AARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNKKDLITQATLLYTM 119

Query: 120 ASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRY 178
           A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+PALLG+AC+ FN+  Y
Sbjct: 120 ADKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPALLGKACISFNKKDY 179

Query: 179 SDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA 238
             +L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF RAL+L+ + V ALV LA
Sbjct: 180 RGALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALELNSKCVGALVGLA 239

Query: 239 VMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVT 298
           V++L   EA  I+ G++ + RA+ I P   M LN+LANHFFF   +  V+ L   A   T
Sbjct: 240 VLELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNT 299

Query: 299 NHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDF 358
                ++ S Y LARS+H + DY++A  YY  + +  +    F+ P++GLGQ+ +  GD 
Sbjct: 300 EVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASS--SFVLPFFGLGQMYIYRGDK 357

Query: 359 RSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKIDPRDAQAFID 415
            +A   FEKVL+ YP+N ET+K LG +Y      EK   A+  L+K  +  P D +A+I+
Sbjct: 358 ENASQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKVTEQYPDDVEAWIE 417

Query: 416 LGELLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDA 474
           L ++L  +D   AL A+ TA R L +K   +VP E+LNN+G +HF  G    A + F   
Sbjct: 418 LAQILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYF--- 474

Query: 475 LGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWN--KVTVLFNLA 532
                 L  LD                        R + +  H E  +N   VT  +NLA
Sbjct: 475 ------LASLD------------------------RAKAEAEHDEHYYNAISVTTSYNLA 504

Query: 533 RLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKY 592
           RL E + +   A  LY+ IL ++ +YVD YLRL A+A+ + N   + +   EAL++N  +
Sbjct: 505 RLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEASDWFKEALQINQDH 564

Query: 593 PNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYFAALRNEKRAPK 651
           P+A S++G+L L   +W   ++ F R         D+Y+ L+LGN  +   L    R  +
Sbjct: 565 PDAWSLIGNLHLAKQEWGPGQKKFERILKQPATQSDTYSMLALGNV-WLQTLHQPTRDRE 623

Query: 652 LEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFV 711
            E  H ++A  +Y +V+     NLYAANG G VLA KG F  ++D+F QV+EA +     
Sbjct: 624 KEKRHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHKGYFREARDVFAQVREATA----- 678

Query: 712 QMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKK 771
            + DVW+NLAH+Y  Q  +  A++MY+NCLRKFY + + +++LYLAR  ++  + Q+CK+
Sbjct: 679 DISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVVLYLARALFKCGKLQECKQ 738

Query: 772 SLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSA 831
           +LL+A H+APS+  L F+  + +Q+ + S L+  +    EV + V ELE A R FS+LS 
Sbjct: 739 TLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVLNAVKELELAHRYFSYLSK 798

Query: 832 ASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNR-------QRQEAARQAA 884
             +     FD     T    C  LL  A+ H   A +++++ R       Q +E  RQ  
Sbjct: 799 VGDKMR--FDLALAATEARQCSDLLSQAQYHVARARKQDEEERELRAKQEQEKELLRQKL 856

Query: 885 LAEE--ARRKAEEQKKYLLEKR 904
           L E+   R + +E++K LLE+R
Sbjct: 857 LKEQEEKRLREKEEQKKLLEQR 878


>gi|297689266|ref|XP_002822077.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Pongo
           abelii]
          Length = 1173

 Score =  528 bits (1361), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 331/922 (35%), Positives = 516/922 (55%), Gaps = 66/922 (7%)

Query: 2   ACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQ 61
             + IP+++++E + +  DQLP +  +++ ILK E   L +W+ +A EY+KQGK E+F +
Sbjct: 4   GSIEIPLRDTDEVIELDFDQLP-EGDEVISILKQEHTQLHIWIALALEYYKQGKTEEFVK 62

Query: 62  ILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNK 119
           +LE   +  ID    Y D   +++  L+ L  YY    + E  +  K++    AT  Y  
Sbjct: 63  LLE---AARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNKKDLITQATLLYTM 119

Query: 120 ASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRY 178
           A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+PALLG+AC+ FN+  Y
Sbjct: 120 ADKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPALLGKACISFNKKDY 179

Query: 179 SDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA 238
             +L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF RAL+L+ + V ALV LA
Sbjct: 180 RGALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALELNSKCVGALVGLA 239

Query: 239 VMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVT 298
           V++L   EA  I+ G++ + RA+ I P   M LN+LANHFFF   +  V+ L   A   T
Sbjct: 240 VLELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNT 299

Query: 299 NHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDF 358
                ++ S Y LARS+H + DY++A  YY  + +  +    F+ P++GLGQ+ +  GD 
Sbjct: 300 EVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASS--SFVLPFFGLGQMYIYRGDK 357

Query: 359 RSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKIDPRDAQAFID 415
            +A   FEKVL+ YP+N ET+K LG +Y      EK   A+  L+K  +  P D +A+I+
Sbjct: 358 ENASQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKVTEQYPDDVEAWIE 417

Query: 416 LGELLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDA 474
           L ++L  +D   AL A+ TA R L +K   +VP E+LNN+G +HF  G    A + F   
Sbjct: 418 LAQILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYF--- 474

Query: 475 LGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWN--KVTVLFNLA 532
                 L  LD                        R + +  H E  +N   VT  +NLA
Sbjct: 475 ------LASLD------------------------RAKAEAEHDEHYYNAISVTTSYNLA 504

Query: 533 RLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKY 592
           RL E + +   A  LY+ IL ++ +YVD YLRL A+A+ + N   + +   EAL++N  +
Sbjct: 505 RLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEASDWFKEALQINQDH 564

Query: 593 PNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYFAALRNEKRAPK 651
           P+A S++G+L L   +W   ++ F R     +   D+Y+ L+LGN  +   L    R  +
Sbjct: 565 PDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQSDTYSMLALGNV-WLQTLHQPTRDRE 623

Query: 652 LEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFV 711
            E  H ++A  +Y +V+     NLYAANG G VLA KG F  ++D+F QV+EA +     
Sbjct: 624 KEKRHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHKGYFREARDVFAQVREATA----- 678

Query: 712 QMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKK 771
            + DVW+NLAH+Y  Q  +  A++MY+NCLRKFY + + +++LYLAR  ++  + Q+CK+
Sbjct: 679 DISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVVLYLARALFKCGKLQECKQ 738

Query: 772 SLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSA 831
           +LL+A H+APS+  L F+  + +Q+ + S L+  +    EV + V ELE A R FS+LS 
Sbjct: 739 TLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVLNAVKELELAHRYFSYLSK 798

Query: 832 ASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNR-------QRQEAARQAA 884
             +     FD     T    C  LL  A+ H   A +++++ R       Q +E  RQ  
Sbjct: 799 VGDKMR--FDLALAATEARQCSDLLSQAQYHVARARKQDEEERELRAKQEQEKELLRQKL 856

Query: 885 LAEE--ARRKAEEQKKYLLEKR 904
           L E+   R + +E++K LLE+R
Sbjct: 857 LKEQEEKRLREKEEQKKLLEQR 878


>gi|426244794|ref|XP_004016202.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Ovis
           aries]
          Length = 1173

 Score =  528 bits (1360), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 331/922 (35%), Positives = 515/922 (55%), Gaps = 66/922 (7%)

Query: 2   ACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQ 61
             + IP+++++E + +  DQLP +  +++ ILK E   L +W+ +A EY+KQGK E+F +
Sbjct: 4   GSIEIPLRDTDEVIELDFDQLP-EGDEVISILKQEHTQLHIWIALALEYYKQGKTEEFVK 62

Query: 62  ILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNK 119
           +LE   +  ID    Y D   +++  L+ L  YY    + E  +  K++    AT  Y  
Sbjct: 63  LLE---AARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNKKDLITQATLLYTM 119

Query: 120 ASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRY 178
           A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+PALLG+AC+ FN+  Y
Sbjct: 120 ADKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPALLGKACISFNKKDY 179

Query: 179 SDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA 238
             +L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF RAL+L+ + V ALV LA
Sbjct: 180 RGALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALELNSKCVGALVGLA 239

Query: 239 VMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVT 298
           V++L   EA  I+ G++ + RA+ I P   M LN+LANHFFF   +  V+ L   A   T
Sbjct: 240 VLELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNT 299

Query: 299 NHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDF 358
                ++ S Y LARS+H + DY++A  YY  + +  +    F+ P++GLGQ+ +  GD 
Sbjct: 300 EVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASS--SFVLPFFGLGQMYIYRGDK 357

Query: 359 RSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKIDPRDAQAFID 415
            +A   FEKVL+ YP+N ET+K LG +Y      EK   A+  L+K  +  P D +A+I+
Sbjct: 358 ENASQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKVTEQYPDDVEAWIE 417

Query: 416 LGELLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDA 474
           L ++L  +D   AL A+ TA R L +K   +VP E+LNN+G +HF  G    A + F   
Sbjct: 418 LAQILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYF--- 474

Query: 475 LGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWN--KVTVLFNLA 532
                 L  LD                        R + +  H E  +N   VT  +NLA
Sbjct: 475 ------LASLD------------------------RAKAEAEHDEHYYNAISVTTSYNLA 504

Query: 533 RLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKY 592
           RL E + +   A  LY+ IL ++ +YVD YLRL A+A+ + N   + +   EAL++N  +
Sbjct: 505 RLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEASDWFKEALQINQDH 564

Query: 593 PNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYFAALRNEKRAPK 651
           P+A S++G+L L   +W   ++ F R         D+Y+ L+LGN  +   L    R  +
Sbjct: 565 PDAWSLIGNLHLAKQEWGPGQKKFERILKQPATQSDTYSMLALGNV-WLQTLHQPTRDRE 623

Query: 652 LEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFV 711
            E  H ++A  +Y +V+     NLYAANG G VLA KG F  ++D+F QV+EA +     
Sbjct: 624 KEKRHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHKGYFREARDVFAQVREATA----- 678

Query: 712 QMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKK 771
            + DVW+NLAH+Y  Q  +  A++MY+NCLRKFY + + +++LYLAR  ++  + Q+CK+
Sbjct: 679 DISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVVLYLARALFKCGKLQECKQ 738

Query: 772 SLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSA 831
           +LL+A H+APS+  L F+  + +Q+ + S L+  +    EV + V ELE A R FS+LS 
Sbjct: 739 TLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVLNAVKELELAHRYFSYLSK 798

Query: 832 ASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNR-------QRQEAARQAA 884
             +     FD     T    C  LL  A+ H   A +++++ R       Q +E  RQ  
Sbjct: 799 VGDKMR--FDLALAATEARQCSDLLSQAQYHVARARKQDEEERELRAKQEQEKELLRQKL 856

Query: 885 LAEE--ARRKAEEQKKYLLEKR 904
           L E+   R + +E++K LLE+R
Sbjct: 857 LKEQEEKRLREKEEQKKLLEQR 878


>gi|359322331|ref|XP_003639833.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Canis
           lupus familiaris]
          Length = 1173

 Score =  528 bits (1360), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 331/922 (35%), Positives = 516/922 (55%), Gaps = 66/922 (7%)

Query: 2   ACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQ 61
             + IP+++++E + +  DQLP +  +++ ILK E   L +W+ +A EY+KQGK E+F +
Sbjct: 4   GSIEIPLRDTDEVIELDFDQLP-EGDEVISILKQEHTQLHIWIALALEYYKQGKTEEFVK 62

Query: 62  ILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNK 119
           +LE   +  ID    Y D   +++  L+ L  YY    + E  +  K++    AT  Y  
Sbjct: 63  LLE---AARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNKKDLITQATLLYTM 119

Query: 120 ASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRY 178
           A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+PALLG+AC+ FN+  Y
Sbjct: 120 ADKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPALLGKACISFNKKDY 179

Query: 179 SDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA 238
             +L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF RAL+L+ + V ALV LA
Sbjct: 180 RGALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALELNSKCVGALVGLA 239

Query: 239 VMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVT 298
           V++L   EA  I+ G++ + RA+ I P   M LN+LANHFFF   +  V+ L   A   T
Sbjct: 240 VLELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNT 299

Query: 299 NHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDF 358
                ++ S Y LARS+H + DY++A  YY  + +  +    F+ P++GLGQ+ +  GD 
Sbjct: 300 EVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASS--SFVLPFFGLGQMYIYRGDK 357

Query: 359 RSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKIDPRDAQAFID 415
            +A   FEKVL+ YP+N ET+K LG +Y      EK   A+  L+K  +  P D +A+I+
Sbjct: 358 ENASQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKVTEQYPDDVEAWIE 417

Query: 416 LGELLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDA 474
           L ++L  +D   AL A+ TA R L +K   +VP E+LNN+G +HF  G    A + F   
Sbjct: 418 LAQILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYF--- 474

Query: 475 LGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWN--KVTVLFNLA 532
                 L  LD                        R + +  H E  +N   VT  +NLA
Sbjct: 475 ------LASLD------------------------RAKAEAEHDEHYYNAISVTTSYNLA 504

Query: 533 RLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKY 592
           RL E + +   A  LY+ IL ++ +YVD YLRL A+A+ + N   + +   EAL++N  +
Sbjct: 505 RLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEASDWFKEALQINQDH 564

Query: 593 PNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYFAALRNEKRAPK 651
           P+A S++G+L L   +W   ++ F R     +   D+Y+ L+LGN  +   L    R  +
Sbjct: 565 PDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQSDTYSMLALGNV-WLQTLHQPTRDRE 623

Query: 652 LEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFV 711
            E  H ++A  +Y +V+     NLYAANG G VLA KG F  ++D+F QV+EA +     
Sbjct: 624 KEKRHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHKGYFREARDVFAQVREATA----- 678

Query: 712 QMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKK 771
            + DVW+NLAH+Y  Q  +  A++MY+NCLRKFY + + +++LYLAR  ++  + Q+CK+
Sbjct: 679 DISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVVLYLARALFKCGKLQECKQ 738

Query: 772 SLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSA 831
           +LL+A H+APS+  L F+  + +Q+ + S L+  +    EV + V ELE A R FS+LS 
Sbjct: 739 TLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVLNAVKELELAHRYFSYLSK 798

Query: 832 ASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNR-------QRQEAARQAA 884
             +     FD     T    C  LL  A+ H   A +++++ R       Q +E  RQ  
Sbjct: 799 VGDKMR--FDLALAATEARQCSDLLSQAQYHVARARKQDEEERELRAKQEQEKELLRQKL 856

Query: 885 LAEE--ARRKAEEQKKYLLEKR 904
           L E+   R + +E++K LLE+R
Sbjct: 857 LKEQEEKRLREKEEQKKLLEQR 878


>gi|51593596|gb|AAH80719.1| Ctr9 protein [Mus musculus]
          Length = 902

 Score =  528 bits (1360), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 329/919 (35%), Positives = 514/919 (55%), Gaps = 64/919 (6%)

Query: 4   VYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQIL 63
           + IP+++++E + +  DQLP +  +++ ILK E   L +W+ +A EY+KQGK E+F ++L
Sbjct: 6   IEIPLRDTDEVIELDFDQLP-EGDEVISILKQEHTQLHIWIALALEYYKQGKTEEFVKLL 64

Query: 64  EEGS-SPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASR 122
           E       +D  Y D   +++  L+ L  YY    + E  +  K++    AT  Y  A +
Sbjct: 65  EAARIDGNLD--YRDHEKDQMTCLDTLAAYYVQQARKEKNKDNKKDLITQATLLYTMADK 122

Query: 123 IDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDS 181
           I M++ +  +G+    L +G+ ++QA + F  VL    +N+PALLG+AC+ FN+  Y  +
Sbjct: 123 IIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPALLGKACISFNKKDYRGA 182

Query: 182 LEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMD 241
           L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF RAL+L+ + V ALV LAV++
Sbjct: 183 LAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALELNSKCVGALVGLAVLE 242

Query: 242 LQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG 301
           L   EA  I+ G++ + RA+ I P   M LN+LANHFFF   +  V+ L   A   T   
Sbjct: 243 LNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNTEVE 302

Query: 302 PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSA 361
             ++ S Y LARS+H + DY++A  YY  + +  +    F+ P++GLGQ+ +  GD  +A
Sbjct: 303 AMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASSS--FVLPFFGLGQMYIYRGDKENA 360

Query: 362 LTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKIDPRDAQAFIDLGE 418
              FEKVL+ YP+N ET+K LG +Y      EK   A+  L+K  +  P D +A+I+L +
Sbjct: 361 SQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKVTEQYPDDVEAWIELAQ 420

Query: 419 LLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGD 477
           +L  +D   AL A+ TA R L +K   +VP E+LNN+G +HF  G    A + F      
Sbjct: 421 ILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYF------ 474

Query: 478 GIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWN--KVTVLFNLARLL 535
              L  LD                        R + +  H E  +N   VT  +NLARL 
Sbjct: 475 ---LASLD------------------------RAKAEAEHDEHYYNAISVTTSYNLARLY 507

Query: 536 EQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNA 595
           E + +   A  LY+ IL ++ +YVD YLRL A+A+ + N   + +   EAL++N  +P+A
Sbjct: 508 EAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEASDWFKEALQINQDHPDA 567

Query: 596 LSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEA 654
            S++G+L L   +W   ++ F R         D+Y+ L+LGN  +   L    R  + E 
Sbjct: 568 WSLIGNLHLAKQEWGPGQKKFERILKQPATQSDTYSMLALGNV-WLQTLHQPTRDREKEK 626

Query: 655 THLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMP 714
            H ++A  +Y +V+     NLYAANG G VLA KG F  ++D+F QV+EA +      + 
Sbjct: 627 RHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHKGYFREARDVFAQVREATAD-----IS 681

Query: 715 DVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLL 774
           DVW+NLAH+Y  Q  +  A++MY+NCLRKFY + + +++LYLAR  ++  + Q+CK++LL
Sbjct: 682 DVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVVLYLARALFKCGKLQECKQTLL 741

Query: 775 RAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASN 834
           +A H+APS+  L F+  + +Q+ + S L+  +    EV + V ELE A R FS+LS   +
Sbjct: 742 KARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVLNAVKELELAHRYFSYLSKVGD 801

Query: 835 LHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNR-------QRQEAARQAALAE 887
                FD     +    C  LL  A+ H   A +++++ R       Q +E  RQ  L E
Sbjct: 802 --KMRFDLALAASEARQCSDLLSQAQYHVARARKQDEEERELRAKQEQEKELLRQKLLKE 859

Query: 888 E--ARRKAEEQKKYLLEKR 904
           +   R + +E++K LLE+R
Sbjct: 860 QEEKRLREKEEQKKLLERR 878


>gi|291384637|ref|XP_002708860.1| PREDICTED: SH2 domain binding protein 1 [Oryctolagus cuniculus]
          Length = 1173

 Score =  528 bits (1360), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 331/922 (35%), Positives = 516/922 (55%), Gaps = 66/922 (7%)

Query: 2   ACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQ 61
             + IP+++++E + +  DQLP +  +++ ILK E   L +W+ +A EY+KQGK E+F +
Sbjct: 4   GSIEIPLRDTDEVIELDFDQLP-EGDEVISILKQEHTQLHIWIALALEYYKQGKTEEFVK 62

Query: 62  ILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNK 119
           +LE   +  ID    Y D   +++  L+ L  YY    + E  +  K++    AT  Y  
Sbjct: 63  LLE---AARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNKKDLITQATLLYTM 119

Query: 120 ASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRY 178
           A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+PALLG+AC+ FN+  Y
Sbjct: 120 ADKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPALLGKACISFNKKDY 179

Query: 179 SDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA 238
             +L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF RAL+L+ + V ALV LA
Sbjct: 180 RGALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALELNSKCVGALVGLA 239

Query: 239 VMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVT 298
           V++L   EA  I+ G++ + RA+ I P   M LN+LANHFFF   +  V+ L   A   T
Sbjct: 240 VLELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNT 299

Query: 299 NHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDF 358
                ++ S Y LARS+H + DY++A  YY  + +  +    F+ P++GLGQ+ +  GD 
Sbjct: 300 EVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASSS--FVLPFFGLGQMYIYRGDK 357

Query: 359 RSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKIDPRDAQAFID 415
            +A   FEKVL+ YP+N ET+K LG +Y      EK   A+  L+K  +  P D +A+I+
Sbjct: 358 ENASQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKVTEQYPDDVEAWIE 417

Query: 416 LGELLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDA 474
           L ++L  +D   AL A+ TA R L +K   +VP E+LNN+G +HF  G    A + F   
Sbjct: 418 LAQILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYF--- 474

Query: 475 LGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWN--KVTVLFNLA 532
                 L  LD                        R + +  H E  +N   VT  +NLA
Sbjct: 475 ------LASLD------------------------RAKAEAEHDEHYYNAISVTTSYNLA 504

Query: 533 RLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKY 592
           RL E + +   A  LY+ IL ++ +YVD YLRL A+A+ + N   + +   EAL++N  +
Sbjct: 505 RLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEASDWFKEALQINQDH 564

Query: 593 PNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYFAALRNEKRAPK 651
           P+A S++G+L L   +W   ++ F R     +   D+Y+ L+LGN  +   L    R  +
Sbjct: 565 PDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQSDTYSMLALGNV-WLQTLHQPTRDRE 623

Query: 652 LEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFV 711
            E  H ++A  +Y +V+     NLYAANG G VLA KG F  ++D+F QV+EA +     
Sbjct: 624 KEKRHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHKGYFREARDVFAQVREATA----- 678

Query: 712 QMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKK 771
            + DVW+NLAH+Y  Q  +  A++MY+NCLRKFY + + +++LYLAR  ++  + Q+CK+
Sbjct: 679 DISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVVLYLARALFKCGKLQECKQ 738

Query: 772 SLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSA 831
           +LL+A H+APS+  L F+  + +Q+ + S L+  +    EV + V ELE A R FS+LS 
Sbjct: 739 TLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVLNAVKELELAHRYFSYLSK 798

Query: 832 ASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNR-------QRQEAARQAA 884
             +     FD     T    C  LL  A+ H   A +++++ R       Q +E  RQ  
Sbjct: 799 VGDKMR--FDLALAATEARQCSDLLSQAQYHVARARKQDEEERELRAKQEQEKELLRQKL 856

Query: 885 LAEE--ARRKAEEQKKYLLEKR 904
           L E+   R + +E++K LLE+R
Sbjct: 857 LKEQEEKRLREKEEQKKLLEQR 878


>gi|395815258|ref|XP_003781150.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Otolemur
           garnettii]
          Length = 1173

 Score =  528 bits (1360), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 331/922 (35%), Positives = 516/922 (55%), Gaps = 66/922 (7%)

Query: 2   ACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQ 61
             + IP+++++E + +  DQLP +  +++ ILK E   L +W+ +A EY+KQGK E+F +
Sbjct: 4   GSIEIPLRDTDEVIELDFDQLP-EGDEVISILKQEHTQLHIWIALALEYYKQGKTEEFVK 62

Query: 62  ILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNK 119
           +LE   +  ID    Y D   +++  L+ L  YY    + E  +  K++    AT  Y  
Sbjct: 63  LLE---AARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNKKDLITQATLLYTM 119

Query: 120 ASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRY 178
           A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+PALLG+AC+ FN+  Y
Sbjct: 120 ADKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPALLGKACISFNKKDY 179

Query: 179 SDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA 238
             +L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF RAL+L+ + V ALV LA
Sbjct: 180 RGALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALELNSKCVGALVGLA 239

Query: 239 VMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVT 298
           V++L   EA  I+ G++ + RA+ I P   M LN+LANHFFF   +  V+ L   A   T
Sbjct: 240 VLELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNT 299

Query: 299 NHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDF 358
                ++ S Y LARS+H + DY++A  YY  + +  +    F+ P++GLGQ+ +  GD 
Sbjct: 300 EVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASS--SFVLPFFGLGQMYIYRGDK 357

Query: 359 RSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKIDPRDAQAFID 415
            +A   FEKVL+ YP+N ET+K LG +Y      EK   A+  L+K  +  P D +A+I+
Sbjct: 358 ENASQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKVTEQYPDDVEAWIE 417

Query: 416 LGELLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDA 474
           L ++L  +D   AL A+ TA R L +K   +VP E+LNN+G +HF  G    A + F   
Sbjct: 418 LAQILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYF--- 474

Query: 475 LGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWN--KVTVLFNLA 532
                 L  LD                        R + +  H E  +N   VT  +NLA
Sbjct: 475 ------LASLD------------------------RAKAEAEHDEHYYNAISVTTSYNLA 504

Query: 533 RLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKY 592
           RL E + +   A  LY+ IL ++ +YVD YLRL A+A+ + N   + +   EAL++N  +
Sbjct: 505 RLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEASDWFKEALQINQDH 564

Query: 593 PNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYFAALRNEKRAPK 651
           P+A S++G+L L   +W   ++ F R     +   D+Y+ L+LGN  +   L    R  +
Sbjct: 565 PDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQSDTYSMLALGNV-WLQTLHQPTRDRE 623

Query: 652 LEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFV 711
            E  H ++A  +Y +V+     NLYAANG G VLA KG F  ++D+F QV+EA +     
Sbjct: 624 KEKRHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHKGYFREARDVFAQVREATA----- 678

Query: 712 QMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKK 771
            + DVW+NLAH+Y  Q  +  A++MY+NCLRKFY + + +++LYLAR  ++  + Q+CK+
Sbjct: 679 DISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVVLYLARALFKCGKLQECKQ 738

Query: 772 SLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSA 831
           +LL+A H+APS+  L F+  + +Q+ + S L+  +    EV + V ELE A R FS+LS 
Sbjct: 739 TLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVLNAVKELELAHRYFSYLSK 798

Query: 832 ASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNR-------QRQEAARQAA 884
             +     FD     T    C  LL  A+ H   A +++++ R       Q +E  RQ  
Sbjct: 799 VGDKMR--FDLALAATEARQCSDLLSQAQYHVARARKQDEEERELRAKQEQEKELLRQKL 856

Query: 885 LAEE--ARRKAEEQKKYLLEKR 904
           L E+   R + +E++K LLE+R
Sbjct: 857 LKEQEEKRLREKEEQKKLLEQR 878


>gi|74138245|dbj|BAE28606.1| unnamed protein product [Mus musculus]
          Length = 897

 Score =  528 bits (1360), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 329/919 (35%), Positives = 514/919 (55%), Gaps = 64/919 (6%)

Query: 4   VYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQIL 63
           + IP+++++E + +  DQLP +  +++ ILK E   L +W+ +A EY+KQGK E+F ++L
Sbjct: 6   IEIPLRDTDEVIELDFDQLP-EGDEVISILKQEHTQLHIWIALALEYYKQGKTEEFVKLL 64

Query: 64  EEGS-SPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASR 122
           E       +D  Y D   +++  L+ L  YY    + E  +  K++    AT  Y  A +
Sbjct: 65  EAARIDGNLD--YRDHEKDQMTCLDTLAAYYVQQARKEKNKDNKKDLITQATLLYTMADK 122

Query: 123 IDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDS 181
           I M++ +  +G+    L +G+ ++QA + F  VL    +N+PALLG+AC+ FN+  Y  +
Sbjct: 123 IIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPALLGKACISFNKKDYRGA 182

Query: 182 LEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMD 241
           L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF RAL+L+ + V ALV LAV++
Sbjct: 183 LAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALELNSKCVGALVGLAVLE 242

Query: 242 LQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG 301
           L   EA  I+ G++ + RA+ I P   M LN+LANHFFF   +  V+ L   A   T   
Sbjct: 243 LNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNTEVE 302

Query: 302 PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSA 361
             ++ S Y LARS+H + DY++A  YY  + +  +    F+ P++GLGQ+ +  GD  +A
Sbjct: 303 AMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASSS--FVLPFFGLGQMYIYRGDKENA 360

Query: 362 LTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKIDPRDAQAFIDLGE 418
              FEKVL+ YP+N ET+K LG +Y      EK   A+  L+K  +  P D +A+I+L +
Sbjct: 361 SQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKVTEQYPDDVEAWIELAQ 420

Query: 419 LLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGD 477
           +L  +D   AL A+ TA R L +K   +VP E+LNN+G +HF  G    A + F      
Sbjct: 421 ILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYF------ 474

Query: 478 GIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWN--KVTVLFNLARLL 535
              L  LD                        R + +  H E  +N   VT  +NLARL 
Sbjct: 475 ---LASLD------------------------RAKAEAEHDEHYYNAISVTTSYNLARLY 507

Query: 536 EQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNA 595
           E + +   A  LY+ IL ++ +YVD YLRL A+A+ + N   + +   EAL++N  +P+A
Sbjct: 508 EAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEASDWFKEALQINQDHPDA 567

Query: 596 LSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEA 654
            S++G+L L   +W   ++ F R         D+Y+ L+LGN  +   L    R  + E 
Sbjct: 568 WSLIGNLHLAKQEWGPGQKKFERILKQPATQSDTYSMLALGNV-WLQTLHQPTRDREKEK 626

Query: 655 THLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMP 714
            H ++A  +Y +V+     NLYAANG G VLA KG F  ++D+F QV+EA +      + 
Sbjct: 627 RHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHKGYFREARDVFAQVREATAD-----IS 681

Query: 715 DVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLL 774
           DVW+NLAH+Y  Q  +  A++MY+NCLRKFY + + +++LYLAR  ++  + Q+CK++LL
Sbjct: 682 DVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVVLYLARALFKCGKLQECKQTLL 741

Query: 775 RAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASN 834
           +A H+APS+  L F+  + +Q+ + S L+  +    EV + V ELE A R FS+LS   +
Sbjct: 742 KARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVLNAVKELELAHRYFSYLSKVGD 801

Query: 835 LHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNR-------QRQEAARQAALAE 887
                FD     +    C  LL  A+ H   A +++++ R       Q +E  RQ  L E
Sbjct: 802 --KMRFDLALAASEARQCSDLLSQAQYHVARARKQDEEERELRAKQEQEKELLRQKLLKE 859

Query: 888 E--ARRKAEEQKKYLLEKR 904
           +   R + +E++K LLE+R
Sbjct: 860 QEEKRLREKEEQKKLLEQR 878


>gi|242018035|ref|XP_002429488.1| tpr repeat nuclear phosphoprotein, putative [Pediculus humanus
           corporis]
 gi|212514426|gb|EEB16750.1| tpr repeat nuclear phosphoprotein, putative [Pediculus humanus
           corporis]
          Length = 1217

 Score =  528 bits (1359), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 322/923 (34%), Positives = 518/923 (56%), Gaps = 57/923 (6%)

Query: 4   VYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQIL 63
           + IP+++++E + + LDQLP D  ++L IL+ E   L +W+ +A EY+KQGK+E+F +IL
Sbjct: 11  IEIPLRDTDEVIELYLDQLP-DGEEVLGILRQEHTVLSIWVNLALEYYKQGKIEEFIKIL 69

Query: 64  EEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRI 123
           +  S  + +  Y D   +++  L+ L  YY      E  + +K + F  AT  Y  A +I
Sbjct: 70  D-ASRTDANIDYRDFEKDQMRALDMLAAYYVQQANKEKNKDKKRDLFTKATLLYTTADKI 128

Query: 124 DMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSL 182
            M++ +  +G+    L +G+ +EQA + F  VL    +N+P+ +G+AC+ FN+  Y  SL
Sbjct: 129 IMYDQNHLLGRAYFCLLEGDKMEQADAQFNFVLNQSPNNIPSQIGKACIAFNKKDYRGSL 188

Query: 183 EFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDL 242
            FYK+AL+ +P+CP A+RLG+G C  KLG L KAR AF+RALQLDP+ V ALV LA++ L
Sbjct: 189 AFYKKALRTNPNCPAAVRLGMGHCFVKLGNLEKARLAFERALQLDPQCVGALVGLAILKL 248

Query: 243 QANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGP 302
              E   IR G++ + +A+ I     M LN+LANHFFF   +  V+ L   A   T +  
Sbjct: 249 NIQEPEDIRAGVQMLSKAYTIDMSNPMVLNHLANHFFFKKDYNKVQHLALHAFHNTENEA 308

Query: 303 TKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSAL 362
            ++ S Y LAR++H + DY++A  YY  + +    P  F+ P+YGLGQ+ +  GD  +A 
Sbjct: 309 MRAESCYQLARAFHVQADYDQAFQYYYQATQ--FAPSAFVLPHYGLGQMYIYRGDSENAA 366

Query: 363 TNFEKVLEIYPDNCETLKALGHIY---VQLGQIEKAQELLRKAAKIDPRDAQAFIDLGEL 419
             FEKVL+  P N ET+K LG +Y       + E A+  L+K  +  P D +A+I+L ++
Sbjct: 367 QCFEKVLKAQPGNYETMKILGSLYANSTSQSKREIAKNHLKKVTEQFPEDVEAWIELAQI 426

Query: 420 LISSDTGAALDAFKTARTLLK-KAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDG 478
           L  SD   AL A+  A  +L+ K   E+P E+LNN+G +H+     E A ++F+D+L   
Sbjct: 427 LEQSDVQGALSAYGMAIKILRDKVQVELPPEILNNVGALHYRLNNLEEAKKNFEDSLAR- 485

Query: 479 IWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQI 538
                  +KT++ +           D Q ++               VT  +NLARL E +
Sbjct: 486 -------AKTESEI-----------DPQYYNSIS------------VTTTYNLARLNESL 515

Query: 539 HDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSM 598
                A  LY+ IL ++ +YVD YLRL  +A+ +  +  + +   +AL++N  +P+A S+
Sbjct: 516 CQYDRAEKLYKDILREHPNYVDCYLRLGCMARDKGQISEASDWFKDALQINNDHPDAWSL 575

Query: 599 LGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHL 657
           LG+L L   +W   ++ F R   +++   D+Y+ ++LGN  +   L    R  + E  H 
Sbjct: 576 LGNLHLAQMEWGPGQKKFERILKNSSTSSDAYSLIALGNV-WLQTLHQPTRDKEREKRHQ 634

Query: 658 EKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVW 717
           E+A  +Y +V+     N++AANG G VLA KG  + ++D+F QV+EA +        DVW
Sbjct: 635 ERALAMYKQVLRNDPRNIWAANGIGAVLAHKGAINEARDVFAQVREATA-----DFCDVW 689

Query: 718 INLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAI 777
           +N+AH+Y  Q  +  A++MY+NCLRKFY     ++L YLAR +++A + ++ K +LL+A 
Sbjct: 690 LNIAHIYVEQKQYISAIQMYENCLRKFYKYPHVEVLQYLARAYFKAGKLKEAKMTLLKAR 749

Query: 778 HLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHL 837
            +AP +  L ++  + +Q+ +   L+  + T   V   V EL  + + F +L+   +   
Sbjct: 750 RVAPQDTVLLYNIALVLQRLAMFILKDVKSTLTTVLQAVHELGLSHKYFQYLAVYGD--R 807

Query: 838 HGFDEKKINTHVEYCKHLLDAAKIHREAAER---EEQQNRQRQEAARQAALAEEARRKAE 894
             +D          C+ LL  A+ H   A R   EE+Q R++QE  R+A       R+ E
Sbjct: 808 MKYDLALAAMEARQCQDLLSQAQYHVARARRVDEEEKQLRKKQEEEREAFRV----RQME 863

Query: 895 EQKKYLLEKRKLEDEQKRLRQQE 917
           EQKK L E+R+ E EQ  +++QE
Sbjct: 864 EQKK-LEERRRQEAEQMLIKRQE 885


>gi|426367476|ref|XP_004050758.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Gorilla
           gorilla gorilla]
          Length = 1173

 Score =  528 bits (1359), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 325/912 (35%), Positives = 507/912 (55%), Gaps = 70/912 (7%)

Query: 2   ACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQ 61
             + IP+++++E + +  DQLP +  +++ ILK E   L +W+ +A EY+KQGK E+F +
Sbjct: 4   GSIEIPLRDTDEVIELDFDQLP-EGDEVISILKQEHTQLHIWIALALEYYKQGKTEEFVK 62

Query: 62  ILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNK 119
           +LE   +  ID    Y D   +++  L+ L  YY    + E  +  K++    AT  Y  
Sbjct: 63  LLE---AARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNKKDLITQATLLYTM 119

Query: 120 ASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRY 178
           A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+PALLG+AC+ FN+  Y
Sbjct: 120 ADKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPALLGKACISFNKKDY 179

Query: 179 SDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA 238
             +L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF RAL+L+ + V ALV LA
Sbjct: 180 RGALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALELNSKCVGALVGLA 239

Query: 239 VMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVT 298
           V++L   EA  I+ G++ + RA+ I P   M LN+LANHFFF   +  V+ L   A   T
Sbjct: 240 VLELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNT 299

Query: 299 NHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDF 358
                ++ S Y LARS+H + DY++A  YY  + +  +    F+ P++GLGQ+ +  GD 
Sbjct: 300 EVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASS--SFVLPFFGLGQMYIYRGDK 357

Query: 359 RSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKIDPRDAQAFID 415
            +A   FEKVL+ YP+N ET+K LG +Y      EK   A+  L+K  +  P D +A+I+
Sbjct: 358 ENASQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKVTEQYPDDVEAWIE 417

Query: 416 LGELLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDA 474
           L ++L  +D   AL A+ TA R L +K   +VP E+LNN+G +HF  G    A + F   
Sbjct: 418 LAQILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYF--- 474

Query: 475 LGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWN--KVTVLFNLA 532
                 L  LD                        R + +  H E  +N   VT  +NLA
Sbjct: 475 ------LASLD------------------------RAKAEAEHDEHYYNAISVTTSYNLA 504

Query: 533 RLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKY 592
           RL E + +   A  LY+ IL ++ +YVD YLRL A+A+ + N   + +   EAL++N  +
Sbjct: 505 RLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEASDWFKEALQINQDH 564

Query: 593 PNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYFAALRNEKRAPK 651
           P+A S++G+L L   +W   ++ F R     +   D+Y+ L+LGN  +   L    R  +
Sbjct: 565 PDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQSDTYSMLALGNV-WLQTLHQPTRDRE 623

Query: 652 LEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFV 711
            E  H ++A  +Y +V+     NLYAANG G VLA KG F  ++D+F QV+EA +     
Sbjct: 624 KEKRHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHKGYFREARDVFAQVREATA----- 678

Query: 712 QMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKK 771
            + DVW+NLAH+Y  Q  +  A++MY+NCLRKFY + + +++LYLAR  ++  + Q+CK+
Sbjct: 679 DISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVVLYLARALFKCGKLQECKQ 738

Query: 772 SLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSA 831
           +LL+A H+APS+  L F+  + +Q+ + S L+  +    EV + V ELE A R FS+LS 
Sbjct: 739 TLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVLNAVKELELAHRYFSYLSK 798

Query: 832 ASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEAARQAALAEEARR 891
             +     FD     T    C  LL  A+ H   A +++++ R             E R 
Sbjct: 799 VGDKMR--FDLALAATEARQCSDLLSQAQYHVARARKQDEEER-------------ELRA 843

Query: 892 KAEEQKKYLLEK 903
           K E++K+ L +K
Sbjct: 844 KQEQEKELLRQK 855


>gi|116283981|gb|AAH10344.1| Ctr9 protein [Mus musculus]
          Length = 939

 Score =  528 bits (1359), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 329/919 (35%), Positives = 514/919 (55%), Gaps = 64/919 (6%)

Query: 4   VYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQIL 63
           + IP+++++E + +  DQLP +  +++ ILK E   L +W+ +A EY+KQGK E+F ++L
Sbjct: 6   IEIPLRDTDEVIELDFDQLP-EGDEVISILKQEHTQLHIWIALALEYYKQGKTEEFVKLL 64

Query: 64  EEGS-SPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASR 122
           E       +D  Y D   +++  L+ L  YY    + E  +  K++    AT  Y  A +
Sbjct: 65  EAARIDGNLD--YRDHEKDQMTCLDTLAAYYVQQARKEKNKDNKKDLITQATLLYTMADK 122

Query: 123 IDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDS 181
           I M++ +  +G+    L +G+ ++QA + F  VL    +N+PALLG+AC+ FN+  Y  +
Sbjct: 123 IIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPALLGKACISFNKKDYRGA 182

Query: 182 LEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMD 241
           L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF RAL+L+ + V ALV LAV++
Sbjct: 183 LAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALELNSKCVGALVGLAVLE 242

Query: 242 LQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG 301
           L   EA  I+ G++ + RA+ I P   M LN+LANHFFF   +  V+ L   A   T   
Sbjct: 243 LNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNTEVE 302

Query: 302 PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSA 361
             ++ S Y LARS+H + DY++A  YY  + +  +    F+ P++GLGQ+ +  GD  +A
Sbjct: 303 AMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASSS--FVLPFFGLGQMYIYRGDKENA 360

Query: 362 LTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKIDPRDAQAFIDLGE 418
              FEKVL+ YP+N ET+K LG +Y      EK   A+  L+K  +  P D +A+I+L +
Sbjct: 361 SQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKVTEQYPDDVEAWIELAQ 420

Query: 419 LLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGD 477
           +L  +D   AL A+ TA R L +K   +VP E+LNN+G +HF  G    A + F      
Sbjct: 421 ILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYF------ 474

Query: 478 GIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWN--KVTVLFNLARLL 535
              L  LD                        R + +  H E  +N   VT  +NLARL 
Sbjct: 475 ---LASLD------------------------RAKAEAEHDEHYYNAISVTTSYNLARLY 507

Query: 536 EQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNA 595
           E + +   A  LY+ IL ++ +YVD YLRL A+A+ + N   + +   EAL++N  +P+A
Sbjct: 508 EAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEASDWFKEALQINQDHPDA 567

Query: 596 LSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEA 654
            S++G+L L   +W   ++ F R         D+Y+ L+LGN  +   L    R  + E 
Sbjct: 568 WSLIGNLHLAKQEWGPGQKKFERILKQPATQSDTYSMLALGNV-WLQTLHQPTRDREKEK 626

Query: 655 THLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMP 714
            H ++A  +Y +V+     NLYAANG G VLA KG F  ++D+F QV+EA +      + 
Sbjct: 627 RHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHKGYFREARDVFAQVREATAD-----IS 681

Query: 715 DVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLL 774
           DVW+NLAH+Y  Q  +  A++MY+NCLRKFY + + +++LYLAR  ++  + Q+CK++LL
Sbjct: 682 DVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVVLYLARALFKCGKLQECKQTLL 741

Query: 775 RAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASN 834
           +A H+APS+  L F+  + +Q+ + S L+  +    EV + V ELE A R FS+LS   +
Sbjct: 742 KARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVLNAVKELELAHRYFSYLSKVGD 801

Query: 835 LHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNR-------QRQEAARQAALAE 887
                FD     +    C  LL  A+ H   A +++++ R       Q +E  RQ  L E
Sbjct: 802 --KMRFDLALAASEARQCSDLLSQAQYHVARARKQDEEERELRAKQEQEKELLRQKLLKE 859

Query: 888 E--ARRKAEEQKKYLLEKR 904
           +   R + +E++K LLE+R
Sbjct: 860 QEEKRLREKEEQKKLLEQR 878


>gi|350580297|ref|XP_003353998.2| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Sus
           scrofa]
          Length = 1171

 Score =  528 bits (1359), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 331/922 (35%), Positives = 516/922 (55%), Gaps = 66/922 (7%)

Query: 2   ACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQ 61
             + IP+++++E + +  DQLP +  +++ ILK E   L +W+ +A EY+KQGK E+F +
Sbjct: 4   GSIEIPLRDTDEVIELDFDQLP-EGDEVISILKQEHTQLHIWIALALEYYKQGKTEEFVK 62

Query: 62  ILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNK 119
           +LE   +  ID    Y D   +++  L+ L  YY    + E  +  K++    AT  Y  
Sbjct: 63  LLE---AARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNKKDLITQATLLYTM 119

Query: 120 ASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRY 178
           A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+PALLG+AC+ FN+  Y
Sbjct: 120 ADKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPALLGKACISFNKKDY 179

Query: 179 SDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA 238
             +L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF RAL+L+ + V ALV LA
Sbjct: 180 RGALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALELNSKCVGALVGLA 239

Query: 239 VMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVT 298
           V++L   EA  I+ G++ + RA+ I P   M LN+LANHFFF   +  V+ L   A   T
Sbjct: 240 VLELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNT 299

Query: 299 NHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDF 358
                ++ S Y LARS+H + DY++A  YY  + +  +    F+ P++GLGQ+ +  GD 
Sbjct: 300 EVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASS--SFVLPFFGLGQMYIYRGDK 357

Query: 359 RSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKIDPRDAQAFID 415
            +A   FEKVL+ YP+N ET+K LG +Y      EK   A+  L+K  +  P D +A+I+
Sbjct: 358 ENASQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKVTEQYPDDVEAWIE 417

Query: 416 LGELLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDA 474
           L ++L  +D   AL A+ TA R L +K   +VP E+LNN+G +HF  G    A + F   
Sbjct: 418 LAQILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYF--- 474

Query: 475 LGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWN--KVTVLFNLA 532
                 L  LD                        R + +  H E  +N   VT  +NLA
Sbjct: 475 ------LASLD------------------------RAKAEAEHDEHYYNAISVTTSYNLA 504

Query: 533 RLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKY 592
           RL E + +   A  LY+ IL ++ +YVD YLRL A+A+ + N   + +   EAL++N  +
Sbjct: 505 RLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEASDWFKEALQINQDH 564

Query: 593 PNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYFAALRNEKRAPK 651
           P+A S++G+L L   +W   ++ F R     +   D+Y+ L+LGN  +   L    R  +
Sbjct: 565 PDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQSDTYSMLALGNV-WLQTLHQPTRDRE 623

Query: 652 LEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFV 711
            E  H ++A  +Y +V+     NLYAANG G VLA KG F  ++D+F QV+EA +     
Sbjct: 624 KEKRHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHKGYFREARDVFAQVREATA----- 678

Query: 712 QMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKK 771
            + DVW+NLAH+Y  Q  +  A++MY+NCLRKFY + + +++LYLAR  ++  + Q+CK+
Sbjct: 679 DISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVVLYLARALFKCGKLQECKQ 738

Query: 772 SLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSA 831
           +LL+A H+APS+  L F+  + +Q+ + S L+  +    EV + V ELE A R FS+LS 
Sbjct: 739 TLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVLNAVKELELAHRYFSYLSK 798

Query: 832 ASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNR-------QRQEAARQAA 884
             +     FD     T    C  LL  A+ H   A +++++ R       Q +E  RQ  
Sbjct: 799 VGDKMR--FDLALAATEARQCSDLLSQAQYHVARARKQDEEERELRAKQEQEKELLRQKL 856

Query: 885 LAEE--ARRKAEEQKKYLLEKR 904
           L E+   R + +E++K LLE+R
Sbjct: 857 LKEQEEKRLREKEEQKKLLEQR 878


>gi|417406061|gb|JAA49707.1| Putative rna polymerase-associated protein ctr9 [Desmodus rotundus]
          Length = 1175

 Score =  527 bits (1358), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 325/912 (35%), Positives = 507/912 (55%), Gaps = 70/912 (7%)

Query: 2   ACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQ 61
             + IP+++++E + +  DQLP +  +++ ILK E   L +W+ +A EY+KQGK E+F +
Sbjct: 4   GSIEIPLRDTDEVIELDFDQLP-EGDEVISILKQEHTQLHIWIALALEYYKQGKTEEFVK 62

Query: 62  ILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNK 119
           +LE   +  ID    Y D   +++  L+ L  YY    + E  +  K++    AT  Y  
Sbjct: 63  LLE---AARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNKKDLITQATLLYTM 119

Query: 120 ASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRY 178
           A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+PALLG+AC+ FN+  Y
Sbjct: 120 ADKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPALLGKACISFNKKDY 179

Query: 179 SDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA 238
             +L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF RAL+L+ + V ALV LA
Sbjct: 180 RGALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALELNSKCVGALVGLA 239

Query: 239 VMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVT 298
           V++L   EA  I+ G++ + RA+ I P   M LN+LANHFFF   +  V+ L   A   T
Sbjct: 240 VLELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNT 299

Query: 299 NHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDF 358
                ++ S Y LARS+H + DY++A  YY  + +  +    F+ P++GLGQ+ +  GD 
Sbjct: 300 EVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASS--SFVLPFFGLGQMYIYRGDK 357

Query: 359 RSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKIDPRDAQAFID 415
            +A   FEKVL+ YP+N ET+K LG +Y      EK   A+  L+K  +  P D +A+I+
Sbjct: 358 ENASQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKVTEQYPDDVEAWIE 417

Query: 416 LGELLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDA 474
           L ++L  +D   AL A+ TA R L +K   +VP E+LNN+G +HF  G    A + F   
Sbjct: 418 LAQILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYF--- 474

Query: 475 LGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWN--KVTVLFNLA 532
                 L  LD                        R + +  H E  +N   VT  +NLA
Sbjct: 475 ------LASLD------------------------RAKAEAEHDEHYYNAISVTTSYNLA 504

Query: 533 RLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKY 592
           RL E + +   A  LY+ IL ++ +YVD YLRL A+A+ + N   + +   EAL++N  +
Sbjct: 505 RLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEASDWFKEALQINQDH 564

Query: 593 PNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYFAALRNEKRAPK 651
           P+A S++G+L L   +W   ++ F R     +   D+Y+ L+LGN  +   L    R  +
Sbjct: 565 PDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQSDTYSMLALGNV-WLQTLHQPTRDRE 623

Query: 652 LEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFV 711
            E  H ++A  +Y +V+     NLYAANG G VLA KG F  ++D+F QV+EA +     
Sbjct: 624 KEKRHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHKGYFREARDVFAQVREATA----- 678

Query: 712 QMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKK 771
            + DVW+NLAH+Y  Q  +  A++MY+NCLRKFY + + +++LYLAR  ++  + Q+CK+
Sbjct: 679 DISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVVLYLARALFKCGKLQECKQ 738

Query: 772 SLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSA 831
           +LL+A H+APS+  L F+  + +Q+ + S L+  +    EV + V ELE A R FS+LS 
Sbjct: 739 TLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVLNAVKELELAHRYFSYLSK 798

Query: 832 ASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEAARQAALAEEARR 891
             +     FD     T    C  LL  A+ H   A +++++ R             E R 
Sbjct: 799 VGDKMR--FDLALAATEARQCSDLLSQAQYHVARARKQDEEER-------------ELRA 843

Query: 892 KAEEQKKYLLEK 903
           K E++K+ L +K
Sbjct: 844 KQEQEKELLRQK 855


>gi|449501928|ref|XP_004174473.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymerase-associated protein
           CTR9 homolog [Taeniopygia guttata]
          Length = 1168

 Score =  527 bits (1358), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 332/922 (36%), Positives = 514/922 (55%), Gaps = 66/922 (7%)

Query: 2   ACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQ 61
             + IP+++++E + +  DQLP +  +++ ILK E   L +W+ +A EY+KQGK E F +
Sbjct: 4   GSIEIPLRDTDEVIELDFDQLP-EGDEVISILKQEHTQLHIWIALALEYYKQGKTEDFVK 62

Query: 62  ILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNK 119
           +LE   +  ID    Y D   +++  L+ L  YY    + E  +  K+E    AT  Y  
Sbjct: 63  LLE---AARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNKKELITQATLLYTM 119

Query: 120 ASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRY 178
           A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+PALLG+AC+ FN+  Y
Sbjct: 120 ADKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPALLGKACISFNKKDY 179

Query: 179 SDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA 238
             +L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF RAL+L+ + V ALV LA
Sbjct: 180 RGALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALELNSKCVGALVGLA 239

Query: 239 VMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVT 298
           V++L   EA  I+ G++ + RA+ I P   M LN+LANHFFF   +  V+ L   A   T
Sbjct: 240 VLELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYGKVQHLALHAFHNT 299

Query: 299 NHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDF 358
                ++ S Y LAR +H + DY++A  YY  + +  +    F+ P++GLGQ+ +  GD 
Sbjct: 300 EVEAMQAESCYQLARXFHVQEDYDQAFQYYYQATQFASSS--FVLPFFGLGQMYIYRGDK 357

Query: 359 RSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKIDPRDAQAFID 415
            +A   FEKVL+ YP+N ET+K LG +Y      EK   A+  L+K  +  P D +A+I+
Sbjct: 358 ENASQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKVTEQYPDDVEAWIE 417

Query: 416 LGELLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDA 474
           L ++L  +D   AL A+ TA R L +K   +VP E+LNN+G +HF  G    A + F   
Sbjct: 418 LAQILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYF--- 474

Query: 475 LGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWN--KVTVLFNLA 532
                 L  LD                        R + +  H E  +N   VT  +NLA
Sbjct: 475 ------LASLD------------------------RAKAEAEHDEHYYNAISVTTSYNLA 504

Query: 533 RLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKY 592
           RL E + +   A  LY+ IL ++ +YVD YLRL A+A+ + N   + +   EAL++N  +
Sbjct: 505 RLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEASDWFKEALQINQDH 564

Query: 593 PNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYFAALRNEKRAPK 651
           P+A S++G+L L   +W   ++ F R     +   D+Y+ L+LGN  +   L    R  +
Sbjct: 565 PDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQNDTYSMLALGNV-WLQTLHQPTRDRE 623

Query: 652 LEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFV 711
            E  H ++A  +Y +V+     NLYAANG G VLA KG F  ++D+F QV+EA +     
Sbjct: 624 KEKRHQDRALAIYKQVLRNDPKNLYAANGIGAVLAHKGYFREARDVFAQVREATA----- 678

Query: 712 QMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKK 771
            + DVW+NLAH+Y  Q  +  A++MY+NCLRKFY + + ++LLYLAR  ++  + Q+CK+
Sbjct: 679 DISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVLLYLARALFKCGKLQECKQ 738

Query: 772 SLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSA 831
           +LL+A H+APS+  L F+  + +Q+ + S L+  +    EV + V ELE A R FS+LS 
Sbjct: 739 TLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVLNAVKELELAHRYFSYLSK 798

Query: 832 ASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNR-------QRQEAARQAA 884
             +     FD     T    C  LL  A+ H   A +++++ R       Q +E  RQ  
Sbjct: 799 VGDKMR--FDLALAATEARQCSDLLSQAQYHVARARKQDEEERELRAKQEQEKELLRQKL 856

Query: 885 LAEE--ARRKAEEQKKYLLEKR 904
           L E+   R + +E++K LLE+R
Sbjct: 857 LKEQEEKRLREKEEQKKLLEQR 878


>gi|281604178|ref|NP_001094131.1| Ctr9, Paf1/RNA polymerase II complex component, homolog [Rattus
           norvegicus]
 gi|149068293|gb|EDM17845.1| SH2 domain binding protein 1 (tetratricopeptide repeat containing),
           isoform CRA_a [Rattus norvegicus]
          Length = 1173

 Score =  527 bits (1357), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 330/922 (35%), Positives = 515/922 (55%), Gaps = 66/922 (7%)

Query: 2   ACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQ 61
             + IP+++++E + +  DQLP +  +++ ILK E   L +W+ +A EY+KQGK E+F +
Sbjct: 4   GSIEIPLRDTDEVIELDFDQLP-EGDEVISILKQEHTQLHIWIALALEYYKQGKTEEFVK 62

Query: 62  ILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNK 119
           +LE   +  ID    Y D   +++  L+ L  YY    + E  +  K++    AT  Y  
Sbjct: 63  LLE---AARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNKKDLITQATLLYTM 119

Query: 120 ASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRY 178
           A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+PALLG+AC+ FN+  Y
Sbjct: 120 ADKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPALLGKACISFNKKDY 179

Query: 179 SDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA 238
             +L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF RAL+L+ + V ALV LA
Sbjct: 180 RGALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALELNSKCVGALVGLA 239

Query: 239 VMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVT 298
           V++L   EA  I+ G++ + RA+ I P   M LN+LANHFFF   +  V+ L   A   T
Sbjct: 240 VLELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNT 299

Query: 299 NHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDF 358
                ++ S Y LARS+H + DY++A  YY  + +  +    F+ P++GLGQ+ +  GD 
Sbjct: 300 EVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASS--SFVLPFFGLGQMYIYRGDK 357

Query: 359 RSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKIDPRDAQAFID 415
            +A   FEKVL+ YP+N ET+K LG +Y      EK   A+  L+K  +  P D +A+I+
Sbjct: 358 ENASQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKVTEQYPDDVEAWIE 417

Query: 416 LGELLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDA 474
           L ++L  +D   AL A+ TA R L +K   +VP E+LNN+G +HF  G    A + F   
Sbjct: 418 LAQILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYF--- 474

Query: 475 LGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWN--KVTVLFNLA 532
                 L  LD                        R + +  H E  +N   VT  +NLA
Sbjct: 475 ------LASLD------------------------RAKAEAEHDEHYYNAISVTTSYNLA 504

Query: 533 RLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKY 592
           RL E + +   A  LY+ IL ++ +YVD YLRL A+A+ + N   + +   EAL++N  +
Sbjct: 505 RLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEASDWFKEALQINQDH 564

Query: 593 PNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYFAALRNEKRAPK 651
           P+A S++G+L L   +W   ++ F R         D+Y+ L+LGN  +   L    R  +
Sbjct: 565 PDAWSLIGNLHLAKQEWGPGQKKFERILKQPATQSDTYSMLALGNV-WLQTLHQPTRDRE 623

Query: 652 LEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFV 711
            E  H ++A  +Y +V+     NLYAANG G VLA KG F  ++D+F QV+EA +     
Sbjct: 624 KEKRHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHKGYFREARDVFAQVREATA----- 678

Query: 712 QMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKK 771
            + DVW+NLAH+Y  Q  +  A++MY+NCLRKFY + + +++LYLAR  ++  + Q+CK+
Sbjct: 679 DISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVVLYLARALFKCGKLQECKQ 738

Query: 772 SLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSA 831
           +LL+A H+APS+  L F+  + +Q+ + S L+  +    EV + V ELE A R FS+LS 
Sbjct: 739 TLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVLNAVKELELAHRYFSYLSK 798

Query: 832 ASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNR-------QRQEAARQAA 884
             +     FD     +    C  LL  A+ H   A +++++ R       Q +E  RQ  
Sbjct: 799 VGDKMR--FDLALAASEARQCSDLLSQAQYHVARARKQDEEERELRAKQEQEKELLRQKL 856

Query: 885 LAEE--ARRKAEEQKKYLLEKR 904
           L E+   R + +E++K LLE+R
Sbjct: 857 LKEQEEKRLREKEEQKKLLEQR 878


>gi|158257020|dbj|BAF84483.1| unnamed protein product [Homo sapiens]
          Length = 1173

 Score =  527 bits (1357), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 330/922 (35%), Positives = 515/922 (55%), Gaps = 66/922 (7%)

Query: 2   ACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQ 61
             + IP+++++E + +  DQLP +  +++ ILK E   L +W+ +A EY+KQGK E+F +
Sbjct: 4   GSIEIPLRDTDEVIELDFDQLP-EGDEVISILKQEHTQLHIWIALALEYYKQGKTEEFVK 62

Query: 62  ILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNK 119
           +LE   +  ID    Y D   +++  L+ L  YY    + E  +  K++    AT  Y  
Sbjct: 63  LLE---AARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNKKDLITQATLLYTM 119

Query: 120 ASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRY 178
           A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+PALLG+AC+ FN+  Y
Sbjct: 120 ADKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPALLGKACISFNKKDY 179

Query: 179 SDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA 238
             +L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF RAL+L+ + V ALV L 
Sbjct: 180 RGALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALELNSKCVGALVGLV 239

Query: 239 VMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVT 298
           V++L   EA  I+ G++ + RA+ I P   M LN+LANHFFF   +  V+ L   A   T
Sbjct: 240 VLELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNT 299

Query: 299 NHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDF 358
                ++ S Y LARS+H + DY++A  YY  + +  +    F+ P++GLGQ+ +  GD 
Sbjct: 300 EVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASSS--FVLPFFGLGQMYIYRGDK 357

Query: 359 RSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKIDPRDAQAFID 415
            +A   FEKVL+ YP+N ET+K LG +Y      EK   A+  L+K  +  P D +A+I+
Sbjct: 358 ENASQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKVTEQYPDDVEAWIE 417

Query: 416 LGELLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDA 474
           L ++L  +D   AL A+ TA R L +K   +VP E+LNN+G +HF  G    A + F   
Sbjct: 418 LAQILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYF--- 474

Query: 475 LGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWN--KVTVLFNLA 532
                 L  LD                        R + +  H E  +N   VT  +NLA
Sbjct: 475 ------LASLD------------------------RAKAEAEHDEHYYNAISVTTSYNLA 504

Query: 533 RLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKY 592
           RL E + +   A  LY+ IL ++ +YVD YLRL A+A+ + N   + +   EAL++N  +
Sbjct: 505 RLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEASDWFKEALQINQDH 564

Query: 593 PNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYFAALRNEKRAPK 651
           P+A S++G+L L   +W   ++ F R     +   D+Y+ L+LGN  +   L    R  +
Sbjct: 565 PDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQSDTYSMLALGNV-WLQTLHQPTRDRE 623

Query: 652 LEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFV 711
            E  H ++A  +Y +V+     NLYAANG G VLA KG F  ++D+F QV+EA +     
Sbjct: 624 KEKRHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHKGYFREARDVFAQVREATA----- 678

Query: 712 QMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKK 771
            + DVW+NLAH+Y  Q  +  A++MY+NCLRKFY + + +++LYLAR  ++  + Q+CK+
Sbjct: 679 DISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVVLYLARALFKCGKLQECKQ 738

Query: 772 SLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSA 831
           +LL+A H+APS+  L F+  + +Q+ + S L+  +    EV + V ELE A R FS+LS 
Sbjct: 739 TLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVLNAVKELELAHRYFSYLSK 798

Query: 832 ASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNR-------QRQEAARQAA 884
             +     FD     T    C  LL  A+ H   A +++++ R       Q +E  RQ  
Sbjct: 799 VGDKMR--FDLALAATEARQCSDLLSQAQYHVARARKQDEEERELRAKQEQEKELLRQKL 856

Query: 885 LAEE--ARRKAEEQKKYLLEKR 904
           L E+   R + +E++K LLE+R
Sbjct: 857 LKEQEEKRLREKEEQKKLLEQR 878


>gi|432851712|ref|XP_004067047.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Oryzias
           latipes]
          Length = 1144

 Score =  526 bits (1356), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 326/924 (35%), Positives = 508/924 (54%), Gaps = 66/924 (7%)

Query: 2   ACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQ 61
             + IP+++++E + +  DQLP +  +++ ILK E   L +W+ +A EY+KQGK E F +
Sbjct: 4   GSIEIPLRDTDEVIELDFDQLP-EGDEVISILKQEHTQLHIWIALALEYYKQGKTEDFVK 62

Query: 62  ILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNK 119
           +LE   +  ID    Y D   +++  L+ L  YY    + E  +  K+E    AT  Y  
Sbjct: 63  LLE---AARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDAKKELITQATLLYTM 119

Query: 120 ASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRY 178
           A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+PALLG+AC+ FN+  Y
Sbjct: 120 ADKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSTNNIPALLGKACISFNKKDY 179

Query: 179 SDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA 238
             +L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF RAL+L+ + V ALV LA
Sbjct: 180 RGALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALELNSKCVGALVGLA 239

Query: 239 VMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVT 298
           V++L   EA  I+ G++ + RA+ I P   M LN+LANHFFF   +  V+ L   A   T
Sbjct: 240 VLELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYRKVQHLALHAFHNT 299

Query: 299 NHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDF 358
                ++ S Y LARS+H + DY++A  YY  + +  +    F+ P++GLGQ+ +   D 
Sbjct: 300 EVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASTT--FVLPFFGLGQMYVYRRDK 357

Query: 359 RSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKIDPRDAQAFID 415
            +A   FEKVL+ YP+N ET+K LG +Y      +K   A+  L+K  +  P D +A+I+
Sbjct: 358 ENAAQCFEKVLKAYPNNYETMKILGSLYATSDDQDKRDIAKGHLKKVTEQYPDDVEAWIE 417

Query: 416 LGELLISSDTGAALDAFKTARTLLKKAGE-EVPIEVLNNIGVIHFEKGEFESAHQSFKDA 474
           L ++L  +D   AL A+ TA  +L++  + +VP E+LNN+G +HF  G    A + F   
Sbjct: 418 LAQILEQTDIQGALSAYGTATRILQETVQADVPPEILNNLGALHFRLGNLGEAKKYF--- 474

Query: 475 LGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWN--KVTVLFNLA 532
                                         +    R + +G H E  +N   VT  +NLA
Sbjct: 475 ------------------------------LASLERAKAEGEHDEHYYNAISVTTSYNLA 504

Query: 533 RLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKY 592
           RL E + +   A  LY+ IL ++ +YVD YLRL A+A+ + N   + +   EAL++N  +
Sbjct: 505 RLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEASDWFKEALQINQDH 564

Query: 593 PNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYFAALRNEKRAPK 651
           P+A S++G+L L   +W   ++ F R     +   D+Y+ L+LGN  +   L    R  +
Sbjct: 565 PDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQNDTYSMLALGNV-WLQTLHQPTRDRE 623

Query: 652 LEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFV 711
            E  H ++A  +Y +V+     NL+AANG G VLA KG F  ++D+F QV+EA +     
Sbjct: 624 KEKRHQDRALAIYKQVLRNDAKNLHAANGIGAVLAHKGYFREARDVFAQVREATA----- 678

Query: 712 QMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKK 771
            + DVW+NLAH+Y  Q  +  A++MY+NCL+KFY   + ++LLYLAR  ++  + Q+CK+
Sbjct: 679 DISDVWLNLAHIYVEQKQYISAVQMYENCLKKFYKYQNTEVLLYLARALFKCGKLQECKQ 738

Query: 772 SLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSA 831
            LL+A H+APS+  L F+  + +Q+ +   L+  +     V S V ELE A R FS+LS 
Sbjct: 739 ILLKARHVAPSDTVLMFNVALVLQRLATLVLKDEKSNLKAVLSAVKELELAHRYFSYLSK 798

Query: 832 ASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAER---EEQQNRQRQEAARQ------ 882
             +     FD     +    C  LL  A+ H   A +   EE++ R +QE  R       
Sbjct: 799 TGDKMR--FDLALAASEARQCSDLLSQAQYHVARARKQDEEEKELRAKQEQERDLLRQQL 856

Query: 883 AALAEEARRKAEEQKKYLLEKRKL 906
               EE R K  E++K LLE+R L
Sbjct: 857 LKQQEEKRNKEAEEQKKLLEQRAL 880


>gi|126332161|ref|XP_001367572.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog
           [Monodelphis domestica]
          Length = 1168

 Score =  526 bits (1356), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 331/922 (35%), Positives = 515/922 (55%), Gaps = 66/922 (7%)

Query: 2   ACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQ 61
             + IP+++++E + +  DQLP +  +++ ILK E   L +W+ +A EY+KQGK E F +
Sbjct: 4   GSIEIPLRDTDEVIELDFDQLP-EGDEVISILKQEHTQLHIWIALALEYYKQGKTEDFVK 62

Query: 62  ILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNK 119
           +LE   +  ID    Y D   +++  L+ L  YY    + E  +  K+E    AT  Y  
Sbjct: 63  LLE---AARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNKKELITQATLLYTM 119

Query: 120 ASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRY 178
           A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+PALLG+AC+ FN+  Y
Sbjct: 120 ADKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPALLGKACISFNKKDY 179

Query: 179 SDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA 238
             +L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF RAL+L+ + V ALV LA
Sbjct: 180 RGALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALELNSKCVGALVGLA 239

Query: 239 VMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVT 298
           V++L   EA  I+ G++ + RA+ I P   M LN+LANHFFF   +  V+ L   A   T
Sbjct: 240 VLELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNT 299

Query: 299 NHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDF 358
                ++ S Y LARS+H + DY++A  YY  + +  +    F+ P++GLGQ+ +  GD 
Sbjct: 300 EVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASS--SFVLPFFGLGQMYIYRGDK 357

Query: 359 RSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKIDPRDAQAFID 415
            +A   FEKVL+ YP+N ET+K LG +Y      +K   A+  L+K  +  P D +A+I+
Sbjct: 358 ENASQCFEKVLKAYPNNYETMKILGSLYAASEDQDKRDIAKGHLKKVTEQYPDDVEAWIE 417

Query: 416 LGELLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDA 474
           L ++L  +D   AL A+ TA R L +K   +VP E+LNN+G +HF  G    A + F   
Sbjct: 418 LAQILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYF--- 474

Query: 475 LGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWN--KVTVLFNLA 532
                 L  LD                        R + +  H E  +N   VT  +NLA
Sbjct: 475 ------LASLD------------------------RAKAEAEHDEHYYNAISVTTSYNLA 504

Query: 533 RLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKY 592
           RL E + +   A  LY+ IL ++ +YVD YLRL A+A+ + N   + +   EAL++N  +
Sbjct: 505 RLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEASDWFKEALQINQDH 564

Query: 593 PNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYFAALRNEKRAPK 651
           P+A S++G+L L   +W   ++ F R     +   D+Y+ L+LGN  +   L    R  +
Sbjct: 565 PDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQNDTYSMLALGNV-WLQTLHQPTRDRE 623

Query: 652 LEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFV 711
            E  H ++A  +Y +V+     NLYAANG G VLA KG F  ++D+F QV+EA +     
Sbjct: 624 KEKRHQDRALAIYKQVLRNDPKNLYAANGIGAVLAHKGYFREARDVFAQVREATA----- 678

Query: 712 QMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKK 771
            + DVW+NLAH+Y  Q  +  A++MY+NCLRKFY + + +++LYLAR  ++  + Q+CK+
Sbjct: 679 DISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVVLYLARALFKCGKLQECKQ 738

Query: 772 SLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSA 831
           +LL+A H+APS+  L F+  + +Q+ + S L+  +    EV + V ELE A R FS+LS 
Sbjct: 739 TLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVLNAVKELELAHRYFSYLSK 798

Query: 832 ASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNR-------QRQEAARQAA 884
             +     FD     T    C  LL  A+ H   A +++++ R       Q +E  RQ  
Sbjct: 799 VGDKMR--FDLALAATEARQCSDLLSQAQYHVARARKQDEEERELRAKQEQEKELLRQKL 856

Query: 885 LAEE--ARRKAEEQKKYLLEKR 904
           L E+   R + +E++K LLE+R
Sbjct: 857 LKEQEEKRLREKEEQKKLLEQR 878


>gi|354492347|ref|XP_003508310.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog
           [Cricetulus griseus]
 gi|344240896|gb|EGV96999.1| RNA polymerase-associated protein CTR9-like [Cricetulus griseus]
          Length = 1171

 Score =  526 bits (1356), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 330/922 (35%), Positives = 516/922 (55%), Gaps = 66/922 (7%)

Query: 2   ACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQ 61
             + IP+++++E + +  DQLP +  +++ ILK E   L +W+ +A EY+KQGK E+F +
Sbjct: 4   GSIEIPLRDTDEVIELDFDQLP-EGDEVISILKQEHTQLHIWIALALEYYKQGKTEEFVK 62

Query: 62  ILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNK 119
           +LE   +  ID    Y D   +++  L+ L  YY    + E  +  K++    AT  Y  
Sbjct: 63  LLE---AARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNKKDLITQATLLYTM 119

Query: 120 ASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRY 178
           A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+PALLG+AC+ FN+  Y
Sbjct: 120 ADKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPALLGKACISFNKKDY 179

Query: 179 SDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA 238
             +L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF RAL+L+ + V ALV LA
Sbjct: 180 RGALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALELNSKCVGALVGLA 239

Query: 239 VMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVT 298
           V++L   EA  I+ G++ + RA+ I P   M LN+LANHFFF   +  V+ L   A   T
Sbjct: 240 VLELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNT 299

Query: 299 NHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDF 358
                ++ S Y LARS+H + DY++A  YY  + +  +    F+ P++GLGQ+ +  GD 
Sbjct: 300 EVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASS--SFVLPFFGLGQMYIYRGDK 357

Query: 359 RSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKIDPRDAQAFID 415
            +A   FEKVL+ YP+N ET+K LG +Y      EK   A+  L+K  +  P D +A+I+
Sbjct: 358 ENASQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKVTEQYPDDVEAWIE 417

Query: 416 LGELLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDA 474
           L ++L  +D   AL A+ TA R L +K   +VP E+LNN+G +HF  G    A + F   
Sbjct: 418 LAQILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYF--- 474

Query: 475 LGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWN--KVTVLFNLA 532
                 L  LD                        R + +  H E  +N   VT  +NLA
Sbjct: 475 ------LASLD------------------------RAKAEAEHDEHYYNAISVTTSYNLA 504

Query: 533 RLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKY 592
           RL E + +   A  LY+ IL ++ +YVD YLRL A+A+ + N   + +   EAL++N  +
Sbjct: 505 RLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEASDWFKEALQINQDH 564

Query: 593 PNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYFAALRNEKRAPK 651
           P+A S++G+L L   +W   ++ F R     +   D+Y+ L+LGN  +   L    R  +
Sbjct: 565 PDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQSDTYSMLALGNV-WLQTLHQPTRDRE 623

Query: 652 LEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFV 711
            E  H ++A  +Y +V+     NLYAANG G VLA KG F  ++D+F QV+EA +     
Sbjct: 624 KEKRHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHKGYFREARDVFAQVREATA----- 678

Query: 712 QMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKK 771
            + DVW+NLAH+Y  Q  +  A++MY+NCLRKFY + + +++LYLAR  ++  + Q+CK+
Sbjct: 679 DISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVVLYLARALFKCGKLQECKQ 738

Query: 772 SLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSA 831
           +LL+A H+APS+  L F+  + +Q+ + S L+  +    EV + V ELE A R FS+LS 
Sbjct: 739 TLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVLNAVKELELAHRYFSYLSK 798

Query: 832 ASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNR-------QRQEAARQAA 884
             +     FD     +    C  LL  A+ H   A +++++ R       Q +E  RQ  
Sbjct: 799 VGDKMR--FDLALAASEARQCSDLLSQAQYHVARARKQDEEERELRAKQEQEKELLRQKL 856

Query: 885 LAEE--ARRKAEEQKKYLLEKR 904
           L E+   R + +E++K LLE+R
Sbjct: 857 LKEQEEKRLREKEEQKKLLEQR 878


>gi|50417750|gb|AAH77978.1| LOC446236 protein, partial [Xenopus laevis]
          Length = 938

 Score =  526 bits (1355), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 327/937 (34%), Positives = 517/937 (55%), Gaps = 70/937 (7%)

Query: 4   VYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQIL 63
           + IP+++++E + +  DQLP +  +++ ILK E   L +W+ +A EYFKQGK E F ++L
Sbjct: 6   IEIPLRDTDEVIELDFDQLP-EGDEVISILKQEHTQLHIWIALALEYFKQGKTEDFVKLL 64

Query: 64  EEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKAS 121
           E   +  ID    Y D   +++  L+ L  YY    + E  +  K+E    AT  Y  A 
Sbjct: 65  E---AARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNKKELITQATLLYTMAD 121

Query: 122 RIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSD 180
           +I M++ +  +G+    L +G+ ++QA + F  VL    +N+PALLG+AC+ FN+  Y  
Sbjct: 122 KIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPALLGKACISFNKKDYRG 181

Query: 181 SLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVM 240
           +L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF RAL L+P  V ALV LAV+
Sbjct: 182 ALAYYKKALRTNPGCPAGVRLGMGHCFVKLNKLDKARLAFGRALDLNPTCVGALVGLAVL 241

Query: 241 DLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 300
           +L   EA  I+ G++ + +A+ I P   M LN+LANHFFF   +  V+ L   A   T  
Sbjct: 242 ELNNKEADSIKNGVQLLSKAYTIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNTEV 301

Query: 301 GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRS 360
              ++ S Y LARS+H + DY++A  YY  + +       F+ P++GLGQ+ +  GD  +
Sbjct: 302 EAMQAESCYQLARSFHVQEDYDQAFQYYYQATQ--FAAASFVLPFFGLGQMYIYRGDKEN 359

Query: 361 ALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKIDPRDAQAFIDLG 417
           A   FEKVL+ YP+N ET+K LG +Y      EK   A+  L+K  +  P D +A+I+L 
Sbjct: 360 ASQCFEKVLKAYPNNYETMKILGSLYAASDDQEKRDIAKSHLKKVTEQYPDDVEAWIELA 419

Query: 418 ELLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALG 476
           ++L  +D   AL A+ TA R L +K   +VP E+LNN+G +HF  G    A + F     
Sbjct: 420 QILEQTDIQNALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYF----- 474

Query: 477 DGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVL--FNLARL 534
               L  LD                        R + +  H E  +N ++V   +NLARL
Sbjct: 475 ----LASLD------------------------RAKAEAEHDEHYYNSISVTTSYNLARL 506

Query: 535 LEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPN 594
            E + +   +  LY+ IL ++ +YVD YLRL A+A+ + N   + +   EAL++N  +P+
Sbjct: 507 YEGLCEFHESEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEASDWFKEALQINQDHPD 566

Query: 595 ALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLE 653
           A S++G+L L   +W   ++ F R     +   D+Y+ L+LGN  +   L    R  + E
Sbjct: 567 AWSLIGNLHLAKQEWGPGQKKFERILKQPSTQNDTYSMLALGNV-WLQTLHQPTRDREKE 625

Query: 654 ATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQM 713
             H ++A  +Y +V+   + NL+AANG G VLA KG    ++D+F QV+EA +      +
Sbjct: 626 KRHQDRALAIYKQVLRNDSKNLFAANGIGAVLAHKGYVREARDVFAQVREATA-----DI 680

Query: 714 PDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSL 773
            DVW+NLAH+Y  Q  +  A++MY+NCLRKFY + + ++LLYLAR  ++  + Q+CK+ L
Sbjct: 681 SDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVLLYLARALFKCGKLQECKQIL 740

Query: 774 LRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAAS 833
           L+A H+AP++  L F+  + +Q+ +   L+  +     V + V ELE A R F++LS   
Sbjct: 741 LKARHVAPNDTVLMFNVALVLQRLATLVLKDEKSNLKAVLNAVKELELAHRYFNYLSKVG 800

Query: 834 NLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEAARQAALAEEARRKA 893
           +     FD     +    C  LL  A+ H   A +++++ +             E R K 
Sbjct: 801 D--KMRFDLALATSEARQCSDLLSQAQYHVARARKQDEEEK-------------EMRTKQ 845

Query: 894 EEQKKYLLEKRKLEDEQKRLRQQEEHFQRVKARIFYI 930
           E++K+ L +K   E E+K LR+ EE  + ++ R  Y+
Sbjct: 846 EQEKEVLRQKLLKEQEEKHLREIEEQKKLLEQRAQYL 882


>gi|149631897|ref|XP_001506546.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog isoform 1
           [Ornithorhynchus anatinus]
          Length = 1163

 Score =  526 bits (1355), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 331/922 (35%), Positives = 515/922 (55%), Gaps = 66/922 (7%)

Query: 2   ACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQ 61
             + IP+++++E + +  DQLP +  +++ ILK E   L +W+ +A EY+KQGK E F +
Sbjct: 4   GSIEIPLRDTDEVIELDFDQLP-EGDEVISILKQEHTQLHIWIALALEYYKQGKTEDFVK 62

Query: 62  ILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNK 119
           +LE   +  ID    Y D   +++  L+ L  YY    + E  +  K+E    AT  Y  
Sbjct: 63  LLE---AARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNKKELITQATLLYTM 119

Query: 120 ASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRY 178
           A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+PALLG+AC+ FN+  Y
Sbjct: 120 ADKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPALLGKACISFNKKDY 179

Query: 179 SDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA 238
             +L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF RAL+L+ + V ALV LA
Sbjct: 180 RGALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALELNSKCVGALVGLA 239

Query: 239 VMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVT 298
           V++L   EA  I+ G++ + RA+ I P   M LN+LANHFFF   +  V+ L   A   T
Sbjct: 240 VLELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNT 299

Query: 299 NHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDF 358
                ++ S Y LARS+H + DY++A  YY  + +  +    F+ P++GLGQ+ +  GD 
Sbjct: 300 EVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASS--SFVLPFFGLGQMYIYRGDK 357

Query: 359 RSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKIDPRDAQAFID 415
            +A   FEKVL+ YP+N ET+K LG +Y      +K   A+  L+K  +  P D +A+I+
Sbjct: 358 ENASQCFEKVLKAYPNNYETMKILGSLYAASEDQDKRDIAKGHLKKVTEQYPDDVEAWIE 417

Query: 416 LGELLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDA 474
           L ++L  +D   AL A+ TA R L +K   +VP E+LNN+G +HF  G    A + F   
Sbjct: 418 LAQILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYF--- 474

Query: 475 LGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWN--KVTVLFNLA 532
                 L  LD                        R + +  H E  +N   VT  +NLA
Sbjct: 475 ------LASLD------------------------RAKAEAEHDEHYYNAISVTTSYNLA 504

Query: 533 RLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKY 592
           RL E + +   A  LY+ IL ++ +YVD YLRL A+A+ + N   + +   EAL++N  +
Sbjct: 505 RLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEASDWFKEALQINQDH 564

Query: 593 PNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYFAALRNEKRAPK 651
           P+A S++G+L L   +W   ++ F R     +   D+Y+ L+LGN  +   L    R  +
Sbjct: 565 PDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQNDTYSMLALGNV-WLQTLHQPTRDRE 623

Query: 652 LEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFV 711
            E  H ++A  +Y +V+     NLYAANG G VLA KG F  ++D+F QV+EA +     
Sbjct: 624 KEKRHQDRALAIYKQVLRNDPKNLYAANGIGAVLAHKGYFREARDVFAQVREATA----- 678

Query: 712 QMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKK 771
            + DVW+NLAH+Y  Q  +  A++MY+NCLRKFY + + +++LYLAR  ++  + Q+CK+
Sbjct: 679 DISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVVLYLARALFKCGKLQECKQ 738

Query: 772 SLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSA 831
           +LL+A H+APS+  L F+  + +Q+ + S L+  +    EV + V ELE A R FS+LS 
Sbjct: 739 TLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVLNAVKELELAHRYFSYLSK 798

Query: 832 ASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNR-------QRQEAARQAA 884
             +     FD     T    C  LL  A+ H   A +++++ R       Q +E  RQ  
Sbjct: 799 VGDKMR--FDLALAATEARQCSDLLSQAQYHVARARKQDEEERELRAKQEQEKELLRQKL 856

Query: 885 LAEE--ARRKAEEQKKYLLEKR 904
           L E+   R + +E++K LLE+R
Sbjct: 857 LKEQEEKRLREKEEQKKLLEQR 878


>gi|154090953|ref|NP_033457.2| RNA polymerase-associated protein CTR9 homolog [Mus musculus]
 gi|91208163|sp|Q62018.2|CTR9_MOUSE RecName: Full=RNA polymerase-associated protein CTR9 homolog;
           AltName: Full=SH2 domain-binding protein 1; AltName:
           Full=Tetratricopeptide repeat-containing, SH2-binding
           phosphoprotein of 150 kDa; Short=TPR-containing,
           SH2-binding phosphoprotein of 150 kDa; Short=p150TSP
 gi|148685056|gb|EDL17003.1| Ctr9, Paf1/RNA polymerase II complex component, homolog (S.
           cerevisiae), isoform CRA_c [Mus musculus]
          Length = 1173

 Score =  526 bits (1354), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 330/922 (35%), Positives = 515/922 (55%), Gaps = 66/922 (7%)

Query: 2   ACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQ 61
             + IP+++++E + +  DQLP +  +++ ILK E   L +W+ +A EY+KQGK E+F +
Sbjct: 4   GSIEIPLRDTDEVIELDFDQLP-EGDEVISILKQEHTQLHIWIALALEYYKQGKTEEFVK 62

Query: 62  ILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNK 119
           +LE   +  ID    Y D   +++  L+ L  YY    + E  +  K++    AT  Y  
Sbjct: 63  LLE---AARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNKKDLITQATLLYTM 119

Query: 120 ASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRY 178
           A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+PALLG+AC+ FN+  Y
Sbjct: 120 ADKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPALLGKACISFNKKDY 179

Query: 179 SDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA 238
             +L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF RAL+L+ + V ALV LA
Sbjct: 180 RGALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALELNSKCVGALVGLA 239

Query: 239 VMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVT 298
           V++L   EA  I+ G++ + RA+ I P   M LN+LANHFFF   +  V+ L   A   T
Sbjct: 240 VLELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNT 299

Query: 299 NHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDF 358
                ++ S Y LARS+H + DY++A  YY  + +  +    F+ P++GLGQ+ +  GD 
Sbjct: 300 EVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASS--SFVLPFFGLGQMYIYRGDK 357

Query: 359 RSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKIDPRDAQAFID 415
            +A   FEKVL+ YP+N ET+K LG +Y      EK   A+  L+K  +  P D +A+I+
Sbjct: 358 ENASQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKVTEQYPDDVEAWIE 417

Query: 416 LGELLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDA 474
           L ++L  +D   AL A+ TA R L +K   +VP E+LNN+G +HF  G    A + F   
Sbjct: 418 LAQILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYF--- 474

Query: 475 LGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWN--KVTVLFNLA 532
                 L  LD                        R + +  H E  +N   VT  +NLA
Sbjct: 475 ------LASLD------------------------RAKAEAEHDEHYYNAISVTTSYNLA 504

Query: 533 RLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKY 592
           RL E + +   A  LY+ IL ++ +YVD YLRL A+A+ + N   + +   EAL++N  +
Sbjct: 505 RLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEASDWFKEALQINQDH 564

Query: 593 PNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYFAALRNEKRAPK 651
           P+A S++G+L L   +W   ++ F R         D+Y+ L+LGN  +   L    R  +
Sbjct: 565 PDAWSLIGNLHLAKQEWGPGQKKFERILKQPATQSDTYSMLALGNV-WLQTLHQPTRDRE 623

Query: 652 LEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFV 711
            E  H ++A  +Y +V+     NLYAANG G VLA KG F  ++D+F QV+EA +     
Sbjct: 624 KEKRHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHKGYFREARDVFAQVREATA----- 678

Query: 712 QMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKK 771
            + DVW+NLAH+Y  Q  +  A++MY+NCLRKFY + + +++LYLAR  ++  + Q+CK+
Sbjct: 679 DISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVVLYLARALFKCGKLQECKQ 738

Query: 772 SLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSA 831
           +LL+A H+APS+  L F+  + +Q+ + S L+  +    EV + V ELE A R FS+LS 
Sbjct: 739 TLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVLNAVKELELAHRYFSYLSK 798

Query: 832 ASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNR-------QRQEAARQAA 884
             +     FD     +    C  LL  A+ H   A +++++ R       Q +E  RQ  
Sbjct: 799 VGDKMR--FDLALAASEARQCSDLLSQAQYHVARARKQDEEERELRAKQEQEKELLRQKL 856

Query: 885 LAEE--ARRKAEEQKKYLLEKR 904
           L E+   R + +E++K LLE+R
Sbjct: 857 LKEQEEKRLREKEEQKKLLEQR 878


>gi|1236239|gb|AAC42083.1| phosphoprotein [Mus musculus]
 gi|1589169|prf||2210338A nuclear phosphoprotein p150TSP
          Length = 1173

 Score =  525 bits (1353), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 330/922 (35%), Positives = 515/922 (55%), Gaps = 66/922 (7%)

Query: 2   ACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQ 61
             + IP+++++E + +  DQLP +  +++ ILK E   L +W+ +A EY+KQGK E+F +
Sbjct: 4   GSIEIPLRDTDEVIELDFDQLP-EGDEVISILKQEHTQLHIWIALALEYYKQGKTEEFVK 62

Query: 62  ILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNK 119
           +LE   +  ID    Y D   +++  L+ L  YY    + E  +  K++    AT  Y  
Sbjct: 63  LLE---AARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNKKDLITQATLLYTM 119

Query: 120 ASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRY 178
           A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+PALLG+AC+ FN+  Y
Sbjct: 120 ADKIIMYDQNHLLGRACFCLLEGDQMDQADAQFHFVLNQSPNNIPALLGKACISFNKKDY 179

Query: 179 SDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA 238
             +L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF RAL+L+ + V ALV LA
Sbjct: 180 RGALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALELNSKCVGALVGLA 239

Query: 239 VMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVT 298
           V++L   EA  I+ G++ + RA+ I P   M LN+LANHFFF   +  V+ L   A   T
Sbjct: 240 VLELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNT 299

Query: 299 NHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDF 358
                ++ S Y LARS+H + DY++A  YY  + +  +    F+ P++GLGQ+ +  GD 
Sbjct: 300 EVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASS--SFVLPFFGLGQMYIYRGDK 357

Query: 359 RSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKIDPRDAQAFID 415
            +A   FEKVL+ YP+N ET+K LG +Y      EK   A+  L+K  +  P D +A+I+
Sbjct: 358 ENASQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKVTEQYPDDVEAWIE 417

Query: 416 LGELLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDA 474
           L ++L  +D   AL A+ TA R L +K   +VP E+LNN+G +HF  G    A + F   
Sbjct: 418 LAQILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYF--- 474

Query: 475 LGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWN--KVTVLFNLA 532
                 L  LD                        R + +  H E  +N   VT  +NLA
Sbjct: 475 ------LASLD------------------------RAKAEAEHDEHYYNAISVTTSYNLA 504

Query: 533 RLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKY 592
           RL E + +   A  LY+ IL ++ +YVD YLRL A+A+ + N   + +   EAL++N  +
Sbjct: 505 RLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEASDWFKEALQINQDH 564

Query: 593 PNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYFAALRNEKRAPK 651
           P+A S++G+L L   +W   ++ F R         D+Y+ L+LGN  +   L    R  +
Sbjct: 565 PDAWSLIGNLHLAKQEWGPGQKKFERILKQPATQSDTYSMLALGNV-WLQTLHQPTRDRE 623

Query: 652 LEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFV 711
            E  H ++A  +Y +V+     NLYAANG G VLA KG F  ++D+F QV+EA +     
Sbjct: 624 KEKRHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHKGYFREARDVFAQVREATA----- 678

Query: 712 QMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKK 771
            + DVW+NLAH+Y  Q  +  A++MY+NCLRKFY + + +++LYLAR  ++  + Q+CK+
Sbjct: 679 DISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVVLYLARALFKCGKLQECKQ 738

Query: 772 SLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSA 831
           +LL+A H+APS+  L F+  + +Q+ + S L+  +    EV + V ELE A R FS+LS 
Sbjct: 739 TLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVLNAVKELELAHRYFSYLSK 798

Query: 832 ASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNR-------QRQEAARQAA 884
             +     FD     +    C  LL  A+ H   A +++++ R       Q +E  RQ  
Sbjct: 799 VGDKMR--FDLALAASEARQCSDLLSQAQYHVARARKQDEEERELRAKQEQEKELLRQKL 856

Query: 885 LAEE--ARRKAEEQKKYLLEKR 904
           L E+   R + +E++K LLE+R
Sbjct: 857 LKEQEEKRLREKEEQKKLLEQR 878


>gi|147905822|ref|NP_001086446.1| RNA polymerase-associated protein CTR9 homolog [Xenopus laevis]
 gi|82249387|sp|Q4QR29.1|CTR9_XENLA RecName: Full=RNA polymerase-associated protein CTR9 homolog;
           AltName: Full=SH2 domain-binding protein 1
 gi|67677972|gb|AAH97638.1| LOC446236 protein [Xenopus laevis]
          Length = 1157

 Score =  525 bits (1353), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 327/939 (34%), Positives = 517/939 (55%), Gaps = 70/939 (7%)

Query: 2   ACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQ 61
             + IP+++++E + +  DQLP +  +++ ILK E   L +W+ +A EYFKQGK E F +
Sbjct: 4   GSIEIPLRDTDEVIELDFDQLP-EGDEVISILKQEHTQLHIWIALALEYFKQGKTEDFVK 62

Query: 62  ILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNK 119
           +LE   +  ID    Y D   +++  L+ L  YY    + E  +  K+E    AT  Y  
Sbjct: 63  LLE---AARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNKKELITQATLLYTM 119

Query: 120 ASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRY 178
           A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+PALLG+AC+ FN+  Y
Sbjct: 120 ADKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPALLGKACISFNKKDY 179

Query: 179 SDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA 238
             +L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF RAL L+P  V ALV LA
Sbjct: 180 RGALAYYKKALRTNPGCPAGVRLGMGHCFVKLNKLDKARLAFGRALDLNPTCVGALVGLA 239

Query: 239 VMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVT 298
           V++L   EA  I+ G++ + +A+ I P   M LN+LANHFFF   +  V+ L   A   T
Sbjct: 240 VLELNNKEADSIKNGVQLLSKAYTIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNT 299

Query: 299 NHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDF 358
                ++ S Y LARS+H + DY++A  YY  + +       F+ P++GLGQ+ +  GD 
Sbjct: 300 EVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFA--AASFVLPFFGLGQMYIYRGDK 357

Query: 359 RSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKIDPRDAQAFID 415
            +A   FEKVL+ YP+N ET+K LG +Y      EK   A+  L+K  +  P D +A+I+
Sbjct: 358 ENASQCFEKVLKAYPNNYETMKILGSLYAASDDQEKRDIAKSHLKKVTEQYPDDVEAWIE 417

Query: 416 LGELLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDA 474
           L ++L  +D   AL A+ TA R L +K   +VP E+LNN+G +HF  G    A + F   
Sbjct: 418 LAQILEQTDIQNALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYF--- 474

Query: 475 LGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVL--FNLA 532
                 L  LD                        R + +  H E  +N ++V   +NLA
Sbjct: 475 ------LASLD------------------------RAKAEAEHDEHYYNSISVTTSYNLA 504

Query: 533 RLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKY 592
           RL E + +   +  LY+ IL ++ +YVD YLRL A+A+ + N   + +   EAL++N  +
Sbjct: 505 RLYEGLCEFHESEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEASDWFKEALQINQDH 564

Query: 593 PNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYFAALRNEKRAPK 651
           P+A S++G+L L   +W   ++ F R     +   D+Y+ L+LGN  +   L    R  +
Sbjct: 565 PDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQNDTYSMLALGNV-WLQTLHQPTRDRE 623

Query: 652 LEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFV 711
            E  H ++A  +Y +V+   + NL+AANG G VLA KG    ++D+F QV+EA +     
Sbjct: 624 KEKRHQDRALAIYKQVLRNDSKNLFAANGIGAVLAHKGYVREARDVFAQVREATA----- 678

Query: 712 QMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKK 771
            + DVW+NLAH+Y  Q  +  A++MY+NCLRKFY + + ++LLYLAR  ++  + Q+CK+
Sbjct: 679 DISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVLLYLARALFKCGKLQECKQ 738

Query: 772 SLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSA 831
            LL+A H+AP++  L F+  + +Q+ +   L+  +     V + V ELE A R F++LS 
Sbjct: 739 ILLKARHVAPNDTVLMFNVALVLQRLATLVLKDEKSNLKAVLNAVKELELAHRYFNYLSK 798

Query: 832 ASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEAARQAALAEEARR 891
             +     FD     +    C  LL  A+ H   A +++++ +             E R 
Sbjct: 799 VGDKMR--FDLALATSEARQCSDLLSQAQYHVARARKQDEEEK-------------EMRT 843

Query: 892 KAEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVKARIFYI 930
           K E++K+ L +K   E E+K LR+ EE  + ++ R  Y+
Sbjct: 844 KQEQEKEVLRQKLLKEQEEKHLREIEEQKKLLEQRAQYL 882


>gi|31753133|gb|AAH53910.1| Ctr9 protein [Mus musculus]
          Length = 939

 Score =  525 bits (1352), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 328/919 (35%), Positives = 513/919 (55%), Gaps = 64/919 (6%)

Query: 4   VYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQIL 63
           + IP+++++E + +  DQLP +  +++ ILK E   L +W+ +A EY+KQGK E+F ++L
Sbjct: 6   IEIPLRDTDEVIELDFDQLP-EGDEVISILKQEHTQLHIWIALALEYYKQGKTEEFVKLL 64

Query: 64  EEGS-SPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASR 122
           E       +D  Y D   +++  L+ L  YY    + E  +  K++    AT  Y  A +
Sbjct: 65  EAARIDGNLD--YRDHEKDQMTCLDTLAAYYVQQARKEKNKDNKKDLITQATLLYTMADK 122

Query: 123 IDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDS 181
           I M++ +  +G+    L +G+ ++QA + F  VL    +N+PALLG+AC+ FN+  Y  +
Sbjct: 123 IIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPALLGKACISFNKKDYRGA 182

Query: 182 LEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMD 241
           L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF  AL+L+ + V ALV LAV++
Sbjct: 183 LAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSSALELNSKCVGALVGLAVLE 242

Query: 242 LQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG 301
           L   EA  I+ G++ + RA+ I P   M LN+LANHFFF   +  V+ L   A   T   
Sbjct: 243 LNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNTEVE 302

Query: 302 PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSA 361
             ++ S Y LARS+H + DY++A  YY  + +  +    F+ P++GLGQ+ +  GD  +A
Sbjct: 303 AMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASSS--FVLPFFGLGQMYIYRGDKENA 360

Query: 362 LTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKIDPRDAQAFIDLGE 418
              FEKVL+ YP+N ET+K LG +Y      EK   A+  L+K  +  P D +A+I+L +
Sbjct: 361 SQCFEKVLKAYPNNYETMKILGSLYAASEYQEKRDIAKGHLKKVTEQYPDDVEAWIELAQ 420

Query: 419 LLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGD 477
           +L  +D   AL A+ TA R L +K   +VP E+LNN+G +HF  G    A + F      
Sbjct: 421 ILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYF------ 474

Query: 478 GIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWN--KVTVLFNLARLL 535
              L  LD                        R + +  H E  +N   VT  +NLARL 
Sbjct: 475 ---LASLD------------------------RAKAEAEHDEHYYNAISVTTSYNLARLY 507

Query: 536 EQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNA 595
           E + +   A  LY+ IL ++ +YVD YLRL A+A+ + N   + +   EAL++N  +P+A
Sbjct: 508 EAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEASDWFKEALQINQDHPDA 567

Query: 596 LSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEA 654
            S++G+L L   +W   ++ F R         D+Y+ L+LGN  +   L    R  + E 
Sbjct: 568 WSLIGNLHLAKQEWGPGQKKFERILKQPATQSDTYSMLALGNV-WLQTLHQPTRDREKEK 626

Query: 655 THLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMP 714
            H ++A  +Y +V+     NLYAANG G VLA KG F  ++D+F QV+EA +      + 
Sbjct: 627 RHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHKGYFREARDVFAQVREATAD-----IS 681

Query: 715 DVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLL 774
           DVW+NLAH+Y  Q  +  A++MY+NCLRKFY + + +++LYLAR  ++  + Q+CK++LL
Sbjct: 682 DVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVVLYLARALFKCGKLQECKQTLL 741

Query: 775 RAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASN 834
           +A H+APS+  L F+  + +Q+ + S L+  +    EV + V ELE A R FS+LS   +
Sbjct: 742 KARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVLNAVKELELAHRYFSYLSKVGD 801

Query: 835 LHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNR-------QRQEAARQAALAE 887
                FD     +    C  LL  A+ H   A +++++ R       Q +E  RQ  L E
Sbjct: 802 --KMRFDLALAASEARQCSDLLSQAQYHVARARKQDEEERELRAKQEQEKELLRQKLLKE 859

Query: 888 E--ARRKAEEQKKYLLEKR 904
           +   R + +E++K LLE+R
Sbjct: 860 QEEKRLREKEEQKKLLEQR 878


>gi|443695316|gb|ELT96257.1| hypothetical protein CAPTEDRAFT_179822 [Capitella teleta]
          Length = 917

 Score =  525 bits (1351), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 313/938 (33%), Positives = 519/938 (55%), Gaps = 70/938 (7%)

Query: 2   ACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQ 61
           + + IP+++++E + + LDQLP +  ++L IL+ EQAPL +W+ +A EY+KQ   + F +
Sbjct: 3   SSIEIPLRDTDEVIELDLDQLP-EGEEVLTILRQEQAPLHIWVTLALEYYKQEHADDFVR 61

Query: 62  ILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKAS 121
           ILE  S  + +  Y++   +++  L+ L  +Y      E+ + +K + F  AT  Y  A 
Sbjct: 62  ILE-ASRTDANINYSNFERDQMRALDTLAAFYVQQAHKESNKEKKRDIFTQATLLYTTAD 120

Query: 122 RIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSD 180
           +I M++ +  +G+    L +G+ ++QA + F  VL    +N+P+LLG+AC+ FN+  +  
Sbjct: 121 KIIMYDQNHLLGRAYFCLLEGDKMDQADAQFNFVLGQSNNNIPSLLGKACIAFNKKDFRG 180

Query: 181 SLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVM 240
           +L +YK+AL+ +P CP A+RLG+G C  KL ++ KARQAF+RAL+LD   V AL+ LA++
Sbjct: 181 ALAYYKKALRTNPECPAAVRLGMGHCFVKLSKMEKARQAFERALELDSNCVGALIGLAII 240

Query: 241 DLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 300
           +L       I+ G++ + +A+ I     M LN+LANHFF+   +  V+ L   A   T +
Sbjct: 241 ELNNKTPDSIKHGVQLLSKAYTIDSTNPMVLNHLANHFFYKKDYQKVQHLALHAFHNTEN 300

Query: 301 GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRS 360
              ++ S Y LAR++H +GDY++A  YY  S +       FI P++GLGQ+ +  GD  +
Sbjct: 301 EAMRAESCYQLARAFHVQGDYDQAFQYYYQSTQ--FSSQNFILPFFGLGQMYIFRGDNEN 358

Query: 361 ALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKIDPRDAQAFIDLG 417
           A+  FEKVL+  P N ET+K LG +Y      EK   A++ L+K  +    D +A+I+L 
Sbjct: 359 AIQCFEKVLKAQPGNYETMKILGSLYANSDDPEKLSLAKQHLKKITEQFAEDVEAWIELA 418

Query: 418 ELLISSDTGAALDAFKTARTLLK-KAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALG 476
           ++L  +D   AL A+ TA  +L  K   E+P E+LNN+  +HF  G  + A +S++ +L 
Sbjct: 419 QILERNDLMGALSAYGTATGILTDKVEAEIPPEILNNVAALHFRMGNLDEAKKSYELSL- 477

Query: 477 DGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNK--VTVLFNLARL 534
                                            R   + +H E  +    VT  +NLARL
Sbjct: 478 --------------------------------ERSRKEASHDENYYGAIAVTTTYNLARL 505

Query: 535 LEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPN 594
            E   D   A  LY+ IL ++ +YVD YLRL  +A+ R  +  + +   EAL++N  +P+
Sbjct: 506 CEATFDFHKAEELYKDILREHPNYVDCYLRLGCMARDRGQIYEASDWFKEALQINQDHPD 565

Query: 595 ALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLE 653
           A S++G+L L   +W   ++ F R         D Y+ ++LGN  +   L    R  + E
Sbjct: 566 AWSLIGNLHLAKQEWGPGQKKFERILQRPATKDDPYSMIALGNV-WLQTLHMPMRDKEKE 624

Query: 654 ATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQM 713
             H ++A  +Y  V+   + N++AANG G VLA KG  + ++D+F QV+EA +       
Sbjct: 625 KRHQDRALSMYKAVLRSDSRNIWAANGIGCVLAHKGHINEARDIFAQVREATAD-----F 679

Query: 714 PDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSL 773
            DVW+N+AHVY  Q  F  A++MY+NCL+KF+ +    I++YLAR +Y+  + ++CK++L
Sbjct: 680 QDVWLNIAHVYVEQKQFVAAVQMYENCLKKFHSHHQTDIMMYLARAYYKCGKLRECKQTL 739

Query: 774 LRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAAS 833
           L+A H++PS+  L ++  +  QK + S L+  +     V   V +LE A R F++LS   
Sbjct: 740 LKARHVSPSDTVLLYNVALVQQKLATSILRDEKSNLKAVLGAVHDLELANRYFTYLSQ-- 797

Query: 834 NLHLHG----FDEKKINTHVEYCKHLLDAAKIHREAAEREEQQN---RQRQEAARQAALA 886
               HG    FD  +       C  LL  A+ H   A + ++Q+   R++QE  R+A   
Sbjct: 798 ----HGDRMKFDLAQAAAEARQCSDLLSQAQYHVGRARKIDEQDKEMRRKQEEEREALRQ 853

Query: 887 EEARRKAEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVK 924
           +   ++ EEQK+      K++ E++ L Q+ ++ Q+ K
Sbjct: 854 KRQLKEEEEQKQ------KVDQEKRLLEQRAQYIQKTK 885


>gi|348559886|ref|XP_003465746.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Cavia
           porcellus]
          Length = 1173

 Score =  524 bits (1350), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 330/922 (35%), Positives = 515/922 (55%), Gaps = 66/922 (7%)

Query: 2   ACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQ 61
             + I +++++E + +  DQLP +  +++ ILK E   L +W+ +A EY+KQGK E+F +
Sbjct: 4   GSIEISLRDTDEVIELDFDQLP-EGDEVISILKQEHTQLHIWIALALEYYKQGKTEEFVK 62

Query: 62  ILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNK 119
           +LE   +  ID    Y D   +++  L+ L  YY    + E  +  K++    AT  Y  
Sbjct: 63  LLE---AARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNKKDLITQATLLYTM 119

Query: 120 ASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRY 178
           A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+PALLG+AC+ FN+  Y
Sbjct: 120 ADKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPALLGKACISFNKKDY 179

Query: 179 SDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA 238
             +L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF RAL+L+ + V ALV LA
Sbjct: 180 RGALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALELNSKCVGALVGLA 239

Query: 239 VMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVT 298
           V++L   EA  I+ G++ + RA+ I P   M LN+LANHFFF   +  V+ L   A   T
Sbjct: 240 VLELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNT 299

Query: 299 NHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDF 358
                ++ S Y LARS+H + DY++A  YY  + +  +    F+ P++GLGQ+ +  GD 
Sbjct: 300 EVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASS--SFVLPFFGLGQMYIYRGDK 357

Query: 359 RSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKIDPRDAQAFID 415
            +A   FEKVL+ YP+N ET+K LG +Y      EK   A+  L+K  +  P D +A+I+
Sbjct: 358 ENASQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKVTEQYPDDVEAWIE 417

Query: 416 LGELLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDA 474
           L ++L  +D   AL A+ TA R L +K   +VP E+LNN+G +HF  G    A + F   
Sbjct: 418 LAQILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYF--- 474

Query: 475 LGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWN--KVTVLFNLA 532
                 L  LD                        R + +  H E  +N   VT  +NLA
Sbjct: 475 ------LASLD------------------------RAKAEAEHDEHYYNAISVTTSYNLA 504

Query: 533 RLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKY 592
           RL E + +   A  LY+ IL ++ +YVD YLRL A+A+ + N   + +   EAL++N  +
Sbjct: 505 RLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEASDWFKEALQINQDH 564

Query: 593 PNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYFAALRNEKRAPK 651
           P+A S++G+L L   +W   ++ F R     +   D+Y+ L+LGN  +   L    R  +
Sbjct: 565 PDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQSDTYSMLALGNV-WLQTLHQPTRDRE 623

Query: 652 LEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFV 711
            E  H ++A  +Y +V+     NLYAANG G VLA KG F  ++D+F QV+EA +     
Sbjct: 624 KEKRHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHKGYFREARDVFAQVREATA----- 678

Query: 712 QMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKK 771
            + DVW+NLAH+Y  Q  +  A++MY+NCLRKFY + + +++LYLAR  ++  + Q+CK+
Sbjct: 679 DISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVVLYLARALFKCGKLQECKQ 738

Query: 772 SLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSA 831
           +LL+A H+APS+  L F+  + +Q+ + S L+  +    EV + V ELE A R FS+LS 
Sbjct: 739 TLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVLNAVKELELAHRSFSYLSK 798

Query: 832 ASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNR-------QRQEAARQAA 884
             +     FD     T    C  LL  A+ H   A +++++ R       Q +E  RQ  
Sbjct: 799 VGDKMR--FDLALAATEARQCSDLLSQAQYHVARARKQDEEERELRAKQEQEKELLRQKL 856

Query: 885 LAEE--ARRKAEEQKKYLLEKR 904
           L E+   R + +E++K LLE+R
Sbjct: 857 LKEQEEKRLREKEEQKKLLEQR 878


>gi|348509587|ref|XP_003442329.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog
           [Oreochromis niloticus]
          Length = 1158

 Score =  523 bits (1348), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 319/893 (35%), Positives = 495/893 (55%), Gaps = 60/893 (6%)

Query: 2   ACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQ 61
             + IP+++++E + +  DQLP +  +++ ILK E   L +W+ +A EY+KQGK E F +
Sbjct: 4   GSIEIPLRDTDEVIELDFDQLP-EGDEVISILKQEHTQLHIWIALALEYYKQGKTEDFVK 62

Query: 62  ILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNK 119
           +LE   +  ID    Y D   +++  L+ L  YY    + E  +  K+E    AT  Y  
Sbjct: 63  LLE---AARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDAKKELITQATLLYTM 119

Query: 120 ASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRY 178
           A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+PALLG+AC+ FN+  Y
Sbjct: 120 ADKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSTNNIPALLGKACISFNKKDY 179

Query: 179 SDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA 238
             +L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF RAL+L+ + V ALV LA
Sbjct: 180 RGALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFGRALELNSKCVGALVGLA 239

Query: 239 VMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVT 298
           V++L   EA  I+ G++ + RA+ I P   M LN+LANHFFF   +  V+ L   A   T
Sbjct: 240 VLELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNT 299

Query: 299 NHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDF 358
                ++ S Y LARS+H + DY++A  YY  + +  +    F+ P++GLGQ+ +   D 
Sbjct: 300 EVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASST--FVLPFFGLGQMYVYRRDK 357

Query: 359 RSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKIDPRDAQAFID 415
            +A   FEKVL+ YP+N ET+K LG +Y      EK   A+  L+K  +  P D +A+I+
Sbjct: 358 ENAAQCFEKVLKAYPNNYETMKILGSLYATSDDQEKRDIAKGHLKKVTEQYPDDVEAWIE 417

Query: 416 LGELLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDA 474
           L ++L  +D   AL A+ TA R L +K   +VP E+LNN+G +HF  G    A + F   
Sbjct: 418 LAQILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNLGALHFRLGNLGEAKKYF--- 474

Query: 475 LGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWN--KVTVLFNLA 532
                                         +    R + +G H E  +N   VT  +NLA
Sbjct: 475 ------------------------------LASLERAKAEGEHDEHYYNAISVTTSYNLA 504

Query: 533 RLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKY 592
           RL E + +   A  LY+ IL ++ +YVD YLRL A+A+ + N   + +   EAL++N  +
Sbjct: 505 RLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEASDWFKEALQINQDH 564

Query: 593 PNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYFAALRNEKRAPK 651
           P+A S++G+L L   +W   ++ F R     +   D+Y+ L+LGN  +   L    R  +
Sbjct: 565 PDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQNDTYSMLALGNV-WLQTLHQPTRDRE 623

Query: 652 LEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFV 711
            E  H ++A  +Y +V+     NLYAANG G VLA KG F  ++D+F QV+EA +     
Sbjct: 624 KEKRHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHKGYFREARDVFAQVREATA----- 678

Query: 712 QMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKK 771
           ++ DVW+NLAH+Y  Q  +  A++MY+NCL+KFY   + ++LLYLAR  ++  + Q+CK+
Sbjct: 679 EISDVWLNLAHIYVEQKQYISAVQMYENCLKKFYKYQNTEVLLYLARALFKCGKLQECKQ 738

Query: 772 SLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSA 831
            LL+A H+AP++  L F+  + +Q+ +   L+  +     V S V ELE A R FS+LS 
Sbjct: 739 MLLKARHVAPNDTVLMFNVALVLQRLATLVLKDEKSNLKAVLSAVKELELAHRYFSYLSK 798

Query: 832 ASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAER---EEQQNRQRQEAAR 881
           A +     FD     +    C  LL  A+ H   A +   EE++ R +QE  R
Sbjct: 799 AGDKMR--FDLALAASEARQCSDLLSQAQYHVARARKQDEEEKELRAKQEQER 849


>gi|332024785|gb|EGI64973.1| RNA polymerase-associated protein CTR9-like protein [Acromyrmex
           echinatior]
          Length = 1225

 Score =  521 bits (1341), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 323/942 (34%), Positives = 524/942 (55%), Gaps = 71/942 (7%)

Query: 2   ACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQ 61
             + IP+++++E + + LDQLP D  ++L IL+ E A L++W+ +A EY+KQ K++ F +
Sbjct: 3   GSIEIPLRDTDEVIELYLDQLP-DGDEVLGILRQEHAQLNIWVNLALEYYKQQKIDDFIK 61

Query: 62  ILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNK 119
           ILE   S  ID    Y D   +++  L+ L  YY      E  + +K + F  AT  Y  
Sbjct: 62  ILE---SSRIDANIDYRDYEKDQMRALDMLAAYYVQEANKEKNKDKKRDLFTKATLLYTT 118

Query: 120 ASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRY 178
           A +I M++ +  +G+    L +G+ +EQA + F  VL    +N+P+LLG+AC+ FN+  Y
Sbjct: 119 ADKIIMYDQNHLLGRAYFCLLEGDKMEQADAQFNFVLNQSPNNIPSLLGKACIAFNKKDY 178

Query: 179 SDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA 238
             +L FYK+AL+ +P+CP A+RLG+G C  KL    KAR AF+RALQLD + V ALV L+
Sbjct: 179 RGALAFYKKALRTNPNCPAAVRLGMGHCFMKLNNQEKARLAFERALQLDGQCVGALVGLS 238

Query: 239 VMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVT 298
           V+ L   +   IR G++ + +A+ I     M LN+LANHFFF   +  V+ L   A   T
Sbjct: 239 VLKLNQQQPDSIRTGVQMLSKAYTIDSTNPMVLNHLANHFFFKKDYNKVQHLALHAFHNT 298

Query: 299 NHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDF 358
            +   ++ S Y LAR++H +GDY++A  YY  + +    P  F+ P++GLGQ+ +  GD 
Sbjct: 299 ENEAMRAESCYQLARAFHVQGDYDQAFQYYYQATQFA--PPVFVLPHFGLGQMYVYRGDA 356

Query: 359 RSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKIDPRDAQAFID 415
            +A   FEKVL+  P N ET+K LG +Y       K   A+  LRK  +  P D +A+I+
Sbjct: 357 ENAAQCFEKVLKAQPGNYETMKILGSLYANSSSQSKRDIAKNHLRKVTEQFPDDVEAWIE 416

Query: 416 LGELLISSDTGAALDAFKTARTLLK-KAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDA 474
           L ++L  SD  AAL+A+ TA  +LK K   ++P E+LNN+G +H+  G  E A ++ +++
Sbjct: 417 LAQILEQSDLNAALNAYGTATRILKEKVQADIPPEILNNVGALHYRLGNLEEARKNLEES 476

Query: 475 LGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNK--VTVLFNLA 532
           L                                  R + D  H  + +N   VT  +NLA
Sbjct: 477 LA---------------------------------RSKADALHDSVYYNSIAVTTTYNLA 503

Query: 533 RLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKY 592
           RL E +     A  LY+ IL ++ +YVD YLRL  +A+ +  +  + +   +AL++N ++
Sbjct: 504 RLNEALCVFDRAEKLYKDILKEHPNYVDCYLRLGCMARDKGQIYEASDWFKDALRINNEH 563

Query: 593 PNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYFAALRNEKRAPK 651
           P+A S+LG+L L   +W   ++ F R   + T   D+Y+ ++LGN  +   L    +  +
Sbjct: 564 PDAWSLLGNLHLAKMEWGPGQKKFERILKNPTTSTDAYSLIALGNI-WLQTLHQSGKDKE 622

Query: 652 LEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFV 711
            E  H ++A  +Y +V+     N++AANG G VLA KG  + ++D+F QV+EA +     
Sbjct: 623 REKRHQDRALAMYKQVLRNDPKNIWAANGIGAVLAHKGCVNEARDIFAQVREATA----- 677

Query: 712 QMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKK 771
           +  DVW+N+AH+Y  Q  F  A++MY+NCLRKFY     ++L YL R +++A + ++ K 
Sbjct: 678 EFCDVWLNIAHIYVEQKQFVSAIQMYENCLRKFYKYHHVEVLQYLGRAYFKAGKLKEAKL 737

Query: 772 SLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSA 831
           +LL+A  +AP +  L ++  + +Q+ +   L+  + T   V   V EL  + + F +LSA
Sbjct: 738 TLLKARRVAPQDTVLLYNIALVLQRLATQILKDEKSTLTTVLQAVHELGLSHKYFQYLSA 797

Query: 832 ASNLHLHGFD-EKKINTHVEYCKHLLDAAKIHREAAER---EEQQNRQRQEAARQAALAE 887
                 HG   E+        C+ LL  A+ H   A R   EE+  R++QE  RQA    
Sbjct: 798 ------HGDRMEQLAEAEARRCQDLLSQAQYHVARARRLDEEEKMLRRKQEEERQAF--- 848

Query: 888 EARRKAEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVKARIFY 929
              R+ EEQ+K  LE+ + + E++ L++++E+ ++ K  + +
Sbjct: 849 -KMRQTEEQRK--LEEMRRQKEEEMLQKRQEYVEKTKNALVF 887


>gi|194213841|ref|XP_001918026.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Equus
           caballus]
          Length = 1162

 Score =  521 bits (1341), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 328/909 (36%), Positives = 507/909 (55%), Gaps = 66/909 (7%)

Query: 15  VRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQILEEGSSPEIDEY 74
           + +  DQLP +  +++ ILK E   L +W+ +A EY+KQGK E+F ++LE   +  ID  
Sbjct: 6   IELDFDQLP-EGDEVISILKQEHTQLHIWIALALEYYKQGKTEEFVKLLE---AARIDGN 61

Query: 75  --YADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWV 132
             Y D   +++  L+ L  YY    + E  +  K++    AT  Y  A +I M++ +  +
Sbjct: 62  LDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNKKDLITQATLLYTMADKIIMYDQNHLL 121

Query: 133 GKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQV 191
           G+    L +G+ ++QA + F  VL    +N+PALLG+AC+ FN+  Y  +L +YK+AL+ 
Sbjct: 122 GRACFCLLEGDKMDQADAQFHFVLNQSPNNIPALLGKACISFNKKDYRGALAYYKKALRT 181

Query: 192 HPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIR 251
           +P CP  +RLG+G C  KL +L KAR AF RAL+L+ + V ALV LAV++L   EA  I+
Sbjct: 182 NPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALELNSKCVGALVGLAVLELNNKEADSIK 241

Query: 252 KGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNL 311
            G++ + RA+ I P   M LN+LANHFFF   +  V+ L   A   T     ++ S Y L
Sbjct: 242 NGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNTEVEAMQAESCYQL 301

Query: 312 ARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEI 371
           ARS+H + DY++A  YY  + +  +    F+ P++GLGQ+ +  GD  +A   FEKVL+ 
Sbjct: 302 ARSFHVQEDYDQAFQYYYQATQFASSS--FVLPFFGLGQMYIYRGDKENASQCFEKVLKA 359

Query: 372 YPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKIDPRDAQAFIDLGELLISSDTGAA 428
           YP+N ET+K LG +Y      EK   A+  L+K  +  P D +A+I+L ++L  +D   A
Sbjct: 360 YPNNYETMKILGSLYAASEDQEKRDIAKGHLKKVTEQYPDDVEAWIELAQILEQTDIQGA 419

Query: 429 LDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSK 487
           L A+ TA R L +K   +VP E+LNN+G +HF  G    A + F         L  LD  
Sbjct: 420 LSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYF---------LASLD-- 468

Query: 488 TKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWN--KVTVLFNLARLLEQIHDTVAAS 545
                                 R + +  H E  +N   VT  +NLARL E + +   A 
Sbjct: 469 ----------------------RAKAEAEHDEHYYNAISVTTSYNLARLYEAMCEFHEAE 506

Query: 546 VLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELK 605
            LY+ IL ++ +YVD YLRL A+A+ + N   + +   EAL++N  +P+A S++G+L L 
Sbjct: 507 KLYKNILREHPNYVDCYLRLGAMARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLA 566

Query: 606 NDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELY 664
             +W   ++ F R     +   D+Y+ L+LGN  +   L    R  + E  H ++A  +Y
Sbjct: 567 KQEWGPGQKKFERILKQPSTQSDTYSMLALGNV-WLQTLHQPTRDREKEKRHQDRALAIY 625

Query: 665 TRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVY 724
            +V+     NLYAANG G VLA KG F  ++D+F QV+EA +      + DVW+NLAH+Y
Sbjct: 626 KQVLRNDAKNLYAANGIGAVLAHKGYFREARDVFAQVREATA-----DISDVWLNLAHIY 680

Query: 725 FAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNY 784
             Q  +  A++MY+NCLRKFY + + +++LYLAR  ++  + Q+CK++LL+A H+APS+ 
Sbjct: 681 VEQKQYISAVQMYENCLRKFYKHQNTEVVLYLARALFKCGKLQECKQTLLKARHVAPSDT 740

Query: 785 TLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGFDEKK 844
            L F+  + +Q+ + S L+  +    EV + V ELE A R FS+LS   +     FD   
Sbjct: 741 VLMFNVALVLQRLATSVLKDEKSNLKEVLNAVKELELAHRYFSYLSKVGDKMR--FDLAL 798

Query: 845 INTHVEYCKHLLDAAKIHREAAEREEQQNR-------QRQEAARQAALAEE--ARRKAEE 895
             T    C  LL  A+ H   A +++++ R       Q +E  RQ  L E+   R + +E
Sbjct: 799 AATEARQCSDLLSQAQYHVARARKQDEEERELRAKQEQEKELLRQKLLKEQEEKRLREKE 858

Query: 896 QKKYLLEKR 904
           ++K LLE+R
Sbjct: 859 EQKKLLEQR 867


>gi|52346058|ref|NP_001005076.1| RNA polymerase-associated protein CTR9 homolog [Xenopus (Silurana)
           tropicalis]
 gi|82235822|sp|Q6DEU9.1|CTR9_XENTR RecName: Full=RNA polymerase-associated protein CTR9 homolog;
           AltName: Full=SH2 domain-binding protein 1
 gi|49900213|gb|AAH76995.1| Ctr9, Paf1/RNA polymerase II complex component, homolog [Xenopus
           (Silurana) tropicalis]
          Length = 1172

 Score =  520 bits (1338), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 326/939 (34%), Positives = 515/939 (54%), Gaps = 70/939 (7%)

Query: 2   ACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQ 61
             + IP+++++E + +  DQLP +  +++ ILK E   L +W+ +  EY+KQ K E F +
Sbjct: 4   GSIEIPLRDTDEVIELDFDQLP-EGDEVISILKQEHTQLHIWIALGLEYYKQVKTEDFVK 62

Query: 62  ILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNK 119
           +LE   +  ID    Y D   +++  L+ L  YY    + E  +  K+E    AT  Y  
Sbjct: 63  LLE---AARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNKKELITQATLLYTM 119

Query: 120 ASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRY 178
           A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+PALLG+AC+ FN+  Y
Sbjct: 120 ADKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPALLGKACISFNKKDY 179

Query: 179 SDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA 238
             +L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF RAL L+P  V ALV LA
Sbjct: 180 RGALAYYKKALRTNPGCPAGVRLGMGHCFVKLNKLDKARLAFGRALDLNPTCVGALVGLA 239

Query: 239 VMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVT 298
           V++L   EA  I+ G++ + +A+ I P   M LN+LANHFFF   +  V+ L   A   T
Sbjct: 240 VLELNNKEADSIKNGVQLLSKAYTIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNT 299

Query: 299 NHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDF 358
                ++ S Y LARS+H + DY++A  YY  + +       F+ P++GLGQ+ +  GD 
Sbjct: 300 EVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFA--AASFVLPFFGLGQMYIYRGDK 357

Query: 359 RSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKIDPRDAQAFID 415
            +A   FEKVL+ YP+N ET+K LG +Y      EK   A+  L+K  +  P D +A+I+
Sbjct: 358 ENASQCFEKVLKAYPNNYETMKILGSLYAASDDQEKRDIAKSHLKKVTEQYPDDVEAWIE 417

Query: 416 LGELLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDA 474
           L ++L  +D   AL A+ TA R L +K   +VP E+LNN+G +HF  G    A + F   
Sbjct: 418 LAQILEQTDIQNALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYF--- 474

Query: 475 LGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWN--KVTVLFNLA 532
                 L  LD                        R + +  H E  +N   VT  +NLA
Sbjct: 475 ------LASLD------------------------RAKAEAEHDEHYYNAISVTTTYNLA 504

Query: 533 RLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKY 592
           RL E + +   +  LY+ IL ++ +YVD YLRL A+A+ + N   + +   EAL++N  +
Sbjct: 505 RLYEGLCEFHESEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEASDWFKEALQINQDH 564

Query: 593 PNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYFAALRNEKRAPK 651
           P+A S++G+L L   +W   ++ F R     +   D+Y+ L+LGN  +   L    R  +
Sbjct: 565 PDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQNDTYSMLALGNV-WLQTLHQPTRDRE 623

Query: 652 LEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFV 711
            E  H ++A  +Y +V+   + NLYAANG G VLA KG    ++D+F QV+EA +     
Sbjct: 624 KEKRHQDRALAIYKQVLRNDSKNLYAANGIGAVLAHKGYVREARDVFAQVREATA----- 678

Query: 712 QMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKK 771
            + DVW+NLAH+Y  Q  +  A++MY+NCLRKFY + + ++LLYLAR  ++  + Q+CK+
Sbjct: 679 DISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVLLYLARALFKCGKLQECKQ 738

Query: 772 SLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSA 831
            LL+A H+AP++  L F+  + +Q+ +   L+  +     V + V ELE A R F++LS 
Sbjct: 739 ILLKARHVAPNDTVLMFNVALVLQRLATLVLKDEKSNLKAVLNAVKELELAHRYFNYLSK 798

Query: 832 ASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEAARQAALAEEARR 891
             +     FD     +    C  LL  A+ H   A +++++ +             E R 
Sbjct: 799 VGDKMR--FDLALAASEARQCSDLLSQAQYHVARARKQDEEEK-------------ELRA 843

Query: 892 KAEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVKARIFYI 930
           K E++K+ L +K   E E+KRL++ EE  + ++ R  Y+
Sbjct: 844 KQEQEKEILRQKLIKEQEEKRLKEIEEQKKLLEQRAQYV 882


>gi|440904272|gb|ELR54810.1| RNA polymerase-associated protein CTR9-like protein [Bos grunniens
           mutus]
          Length = 1185

 Score =  519 bits (1337), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 331/934 (35%), Positives = 515/934 (55%), Gaps = 78/934 (8%)

Query: 2   ACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQ 61
             + IP+++++E + +  DQLP +  +++ ILK E   L +W+ +A EY+KQGK E+F +
Sbjct: 4   GSIEIPLRDTDEVIELDFDQLP-EGDEVISILKQEHTQLHIWIALALEYYKQGKTEEFVK 62

Query: 62  ILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNK 119
           +LE   +  ID    Y D   +++  L+ L  YY    + E  +  K++    AT  Y  
Sbjct: 63  LLE---AARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNKKDLITQATLLYTM 119

Query: 120 ASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRY 178
           A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+PALLG+AC+ FN+  Y
Sbjct: 120 ADKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPALLGKACISFNKKDY 179

Query: 179 SDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA 238
             +L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF RAL+L+ + V ALV LA
Sbjct: 180 RGALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALELNSKCVGALVGLA 239

Query: 239 VMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVT 298
           V++L   EA  I+ G++ + RA+ I P   M LN+LANHFFF   +  V+ L   A   T
Sbjct: 240 VLELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNT 299

Query: 299 NHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDF 358
                ++ S Y LARS+H + DY++A  YY  + +  +    F+ P++GLGQ+ +  GD 
Sbjct: 300 EVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASS--SFVLPFFGLGQMYIYRGDK 357

Query: 359 RSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKIDPRDAQAFID 415
            +A   FEKVL+ YP+N ET+K LG +Y      EK   A+  L+K  +  P D +A+I+
Sbjct: 358 ENASQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKVTEQYPDDVEAWIE 417

Query: 416 LGELLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDA 474
           L ++L  +D   AL A+ TA R L +K   +VP E+LNN+G +HF  G    A + F   
Sbjct: 418 LAQILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYF--- 474

Query: 475 LGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWN--KVTVLFNLA 532
                 L  LD                        R + +  H E  +N   VT  +NLA
Sbjct: 475 ------LASLD------------------------RAKAEAEHDEHYYNAISVTTSYNLA 504

Query: 533 RLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKY 592
           RL E + +   A  LY+ IL ++ +YVD YLRL A+A+ + N   + +   EAL++N  +
Sbjct: 505 RLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEASDWFKEALQINQDH 564

Query: 593 PNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYFAALRNEKRAPK 651
           P+A S++G+L L   +W   ++ F R         D+Y+ L+LGN  +   L    R  +
Sbjct: 565 PDAWSLIGNLHLAKQEWGPGQKKFERILKQPATQSDTYSMLALGNV-WLQTLHQPTRDRE 623

Query: 652 LEATHLEKAKELYTRVIVQHTSNLYAANGAG------------VVLAEKGQFDVSKDLFT 699
            E  H ++A  +Y +V+     NLYAANG G             VLA KG F  ++D+F 
Sbjct: 624 KEKRHQDRALAIYKQVLRNDAKNLYAANGIGSSNSVNLFITLGAVLAHKGYFREARDVFA 683

Query: 700 QVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLART 759
           QV+EA +      + DVW+NLAH+Y  Q  +  A++MY+NCLRKFY + + +++LYLAR 
Sbjct: 684 QVREATA-----DISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVVLYLARA 738

Query: 760 HYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAEL 819
            ++  + Q+CK++LL+A H+APS+  L F+  + +Q+ + S L+  +    EV + V EL
Sbjct: 739 LFKCGKLQECKQTLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVLNAVKEL 798

Query: 820 ENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNR----- 874
           E A R FS+LS   +     FD     T    C  LL  A+ H   A +++++ R     
Sbjct: 799 ELAHRYFSYLSKVGDKMR--FDLALAATEARQCSDLLSQAQYHVARARKQDEEERELRAK 856

Query: 875 --QRQEAARQAALAEE--ARRKAEEQKKYLLEKR 904
             Q +E  RQ  L E+   R + +E++K LLE+R
Sbjct: 857 QEQEKELLRQKLLKEQEEKRLREKEEQKKLLEQR 890


>gi|395543506|ref|XP_003773658.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog
           [Sarcophilus harrisii]
          Length = 1156

 Score =  518 bits (1335), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 328/909 (36%), Positives = 506/909 (55%), Gaps = 66/909 (7%)

Query: 15  VRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQILEEGSSPEIDEY 74
           + +  DQLP +  +++ ILK E   L +W+ +A EY+KQGK E F ++LE   +  ID  
Sbjct: 4   IELDFDQLP-EGDEVISILKQEHTQLHIWIALALEYYKQGKTEDFVKLLE---AARIDGN 59

Query: 75  --YADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWV 132
             Y D   +++  L+ L  YY    + E  +  K+E    AT  Y  A +I M++ +  +
Sbjct: 60  LDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNKKELITQATLLYTMADKIIMYDQNHLL 119

Query: 133 GKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQV 191
           G+    L +G+ ++QA + F  VL    +N+PALLG+AC+ FN+  Y  +L +YK+AL+ 
Sbjct: 120 GRACFCLLEGDKMDQADAQFHFVLNQSPNNIPALLGKACISFNKKDYRGALAYYKKALRT 179

Query: 192 HPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIR 251
           +P CP  +RLG+G C  KL +L KAR AF RAL+L+ + V ALV LAV++L   EA  I+
Sbjct: 180 NPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALELNSKCVGALVGLAVLELNNKEADSIK 239

Query: 252 KGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNL 311
            G++ + RA+ I P   M LN+LANHFFF   +  V+ L   A   T     ++ S Y L
Sbjct: 240 NGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNTEVEAMQAESCYQL 299

Query: 312 ARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEI 371
           ARS+H + DY++A  YY  + +  +    F+ P++GLGQ+ +  GD  +A   FEKVL+ 
Sbjct: 300 ARSFHVQEDYDQAFQYYYQATQFASS--SFVLPFFGLGQMYIYRGDKENASQCFEKVLKA 357

Query: 372 YPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKIDPRDAQAFIDLGELLISSDTGAA 428
           YP+N ET+K LG +Y      +K   A+  L+K  +  P D +A+I+L ++L  +D   A
Sbjct: 358 YPNNYETMKILGSLYAASEDQDKRDIAKGHLKKVTEQYPDDVEAWIELAQILEQTDIQGA 417

Query: 429 LDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSK 487
           L A+ TA R L +K   +VP E+LNN+G +HF  G    A + F         L  LD  
Sbjct: 418 LSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYF---------LASLD-- 466

Query: 488 TKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWN--KVTVLFNLARLLEQIHDTVAAS 545
                                 R + +  H E  +N   VT  +NLARL E + +   A 
Sbjct: 467 ----------------------RAKAEAEHDEHYYNAISVTTSYNLARLYEAMCEFHEAE 504

Query: 546 VLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELK 605
            LY+ IL ++ +YVD YLRL A+A+ + N   + +   EAL++N  +P+A S++G+L L 
Sbjct: 505 KLYKNILREHPNYVDCYLRLGAMARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLA 564

Query: 606 NDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELY 664
             +W   ++ F R     +   D+Y+ L+LGN  +   L    R  + E  H ++A  +Y
Sbjct: 565 KQEWGPGQKKFERILKQPSTQNDTYSMLALGNV-WLQTLHQPTRDREKEKRHQDRALAIY 623

Query: 665 TRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVY 724
            +V+     NLYAANG G VLA KG F  ++D+F QV+EA +      + DVW+NLAH+Y
Sbjct: 624 KQVLRNDPKNLYAANGIGAVLAHKGYFREARDVFAQVREATA-----DISDVWLNLAHIY 678

Query: 725 FAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNY 784
             Q  +  A++MY+NCLRKFY + + +++LYLAR  ++  + Q+CK++LL+A H+APS+ 
Sbjct: 679 VEQKQYISAVQMYENCLRKFYKHQNTEVVLYLARALFKCGKLQECKQTLLKARHVAPSDT 738

Query: 785 TLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGFDEKK 844
            L F+  + +Q+ + S L+  +    EV + V ELE A R FS+LS   +     FD   
Sbjct: 739 VLMFNVALVLQRLATSVLKDEKSNLKEVLNAVKELELAHRYFSYLSKVGDKMR--FDLAL 796

Query: 845 INTHVEYCKHLLDAAKIHREAAEREEQQNR-------QRQEAARQAALAEE--ARRKAEE 895
             T    C  LL  A+ H   A +++++ R       Q +E  RQ  L E+   R + +E
Sbjct: 797 AATEARQCSDLLSQAQYHVARARKQDEEERELRAKQEQEKELLRQKLLKEQEEKRLREKE 856

Query: 896 QKKYLLEKR 904
           ++K LLE+R
Sbjct: 857 EQKKLLEQR 865


>gi|297268403|ref|XP_001094093.2| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Macaca
            mulatta]
          Length = 1298

 Score =  518 bits (1334), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 328/909 (36%), Positives = 507/909 (55%), Gaps = 66/909 (7%)

Query: 15   VRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQILEEGSSPEIDEY 74
            + +  DQLP +  +++ ILK E   L +W+ +A EY+KQGK E+F ++LE   +  ID  
Sbjct: 142  IELDFDQLP-EGDEVISILKQEHTQLHIWIALALEYYKQGKTEEFVKLLE---AARIDGN 197

Query: 75   --YADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWV 132
              Y D   +++  L+ L  YY    + E  +  K++    AT  Y  A +I M++ +  +
Sbjct: 198  LDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNKKDLITQATLLYTMADKIIMYDQNHLL 257

Query: 133  GKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQV 191
            G+    L +G+ ++QA + F  VL    +N+PALLG+AC+ FN+  Y  +L +YK+AL+ 
Sbjct: 258  GRACFCLLEGDKMDQADAQFHFVLNQSPNNIPALLGKACISFNKKDYRGALAYYKKALRT 317

Query: 192  HPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIR 251
            +P CP  +RLG+G C  KL +L KAR AF RAL+L+ + V ALV LAV++L   EA  I+
Sbjct: 318  NPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALELNSKCVGALVGLAVLELNNKEADSIK 377

Query: 252  KGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNL 311
             G++ + RA+ I P   M LN+LANHFFF   +  V+ L   A   T     ++ S Y L
Sbjct: 378  NGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNTEVEAMQAESCYQL 437

Query: 312  ARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEI 371
            ARS+H + DY++A  YY  + +  +    F+ P++GLGQ+ +  GD  +A   FEKVL+ 
Sbjct: 438  ARSFHVQEDYDQAFQYYYQATQFASS--SFVLPFFGLGQMYIYRGDKENASQCFEKVLKA 495

Query: 372  YPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKIDPRDAQAFIDLGELLISSDTGAA 428
            YP+N ET+K LG +Y      EK   A+  L+K  +  P D +A+I+L ++L  +D   A
Sbjct: 496  YPNNYETMKILGSLYAASEDQEKRDIAKGHLKKVTEQYPDDVEAWIELAQILEQTDIQGA 555

Query: 429  LDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSK 487
            L A+ TA R L +K   +VP E+LNN+G +HF  G    A + F         L  LD  
Sbjct: 556  LSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYF---------LASLD-- 604

Query: 488  TKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWN--KVTVLFNLARLLEQIHDTVAAS 545
                                  R + +  H E  +N   VT  +NLARL E + +   A 
Sbjct: 605  ----------------------RAKAEAEHDEHYYNAISVTTSYNLARLYEAMCEFHEAE 642

Query: 546  VLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELK 605
             LY+ IL ++ +YVD YLRL A+A+ + N   + +   EAL++N  +P+A S++G+L L 
Sbjct: 643  KLYKNILREHPNYVDCYLRLGAMARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLA 702

Query: 606  NDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELY 664
              +W   ++ F R     +   D+Y+ L+LGN  +   L    R  + E  H ++A  +Y
Sbjct: 703  KQEWGPGQKKFERILKQPSTQSDTYSMLALGNV-WLQTLHQPTRDREKEKRHQDRALAIY 761

Query: 665  TRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVY 724
             +V+     NLYAANG G VLA KG F  ++D+F QV+EA +      + DVW+NLAH+Y
Sbjct: 762  KQVLRNDAKNLYAANGIGAVLAHKGYFREARDVFAQVREATA-----DISDVWLNLAHIY 816

Query: 725  FAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNY 784
              Q  +  A++MY+NCLRKFY + + +++LYLAR  ++  + Q+CK++LL+A H+APS+ 
Sbjct: 817  VEQKQYISAVQMYENCLRKFYKHQNTEVVLYLARALFKCGKLQECKQTLLKARHVAPSDT 876

Query: 785  TLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGFDEKK 844
             L F+  + +Q+ + S L+  +    EV + V ELE A R FS+LS   +     FD   
Sbjct: 877  VLMFNVALVLQRLATSVLKDEKSNLKEVLNAVKELELAHRYFSYLSKVGDKMR--FDLAL 934

Query: 845  INTHVEYCKHLLDAAKIHREAAEREEQQNR-------QRQEAARQAALAEE--ARRKAEE 895
              T    C  LL  A+ H   A +++++ R       Q +E  RQ  L E+   R + +E
Sbjct: 935  AATEARQCSDLLSQAQYHVARARKQDEEERELRAKQEQEKELLRQKLLKEQEEKRLREKE 994

Query: 896  QKKYLLEKR 904
            ++K LLE+R
Sbjct: 995  EQKKLLEQR 1003


>gi|383851981|ref|XP_003701509.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog
           [Megachile rotundata]
          Length = 1271

 Score =  518 bits (1334), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 321/942 (34%), Positives = 524/942 (55%), Gaps = 71/942 (7%)

Query: 2   ACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQ 61
             + IP+++++E + + LDQLP +  ++L IL+ E A L++W+ +A EY+KQ K+E F +
Sbjct: 3   GSIEIPLRDTDEVIELYLDQLP-EGDEVLGILRQEHAQLNIWVNLALEYYKQHKIEDFIK 61

Query: 62  ILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNK 119
           ILE   S  ID    Y D   +++  L+ L  YY      E  + +K + F  AT  Y  
Sbjct: 62  ILE---SSRIDANIDYRDYEKDQMRALDMLAAYYVQEANREKNKDKKRDLFTKATLLYTT 118

Query: 120 ASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRY 178
           A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+P+LLG+AC+ FN+  Y
Sbjct: 119 ADKIIMYDQNHLLGRAYFCLLEGDKMDQADAQFNFVLNQSPNNIPSLLGKACIAFNKKDY 178

Query: 179 SDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA 238
             +L FYK+AL+ +P+CP A+RLG+G C  KL    KAR AF+RALQLD + V ALV L+
Sbjct: 179 RGALAFYKKALRTNPNCPAAVRLGMGHCFMKLNNQEKARLAFERALQLDGQCVGALVGLS 238

Query: 239 VMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVT 298
           V+ L   +   IR G++ + +A+ I     M LN+LANHFFF   +  V+ L   A   T
Sbjct: 239 VLKLNQQQPDSIRTGVQMLSKAYTIDSTNPMVLNHLANHFFFKKDYNKVQHLALHAFHNT 298

Query: 299 NHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDF 358
            +   ++ S Y LAR++H +GDY++A  YY  + +    P  F+ P++GLGQ+ +  GD 
Sbjct: 299 ENEAMRAESCYQLARAFHVQGDYDQAFQYYYQATQFA--PPVFVLPHFGLGQMYVYRGDA 356

Query: 359 RSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKIDPRDAQAFID 415
            +A   FEKVL+  P N ET+K LG +Y       K   A+  LRK  +  P D +A+I+
Sbjct: 357 ENAAQCFEKVLKAQPGNYETMKILGSLYANSSSQSKRDIAKNHLRKVTEQFPDDVEAWIE 416

Query: 416 LGELLISSDTGAALDAFKTARTLLK-KAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDA 474
           L ++L  SD  AAL+A+ TA  +LK K   ++P E+LNN+G +H+  G  E A ++ +++
Sbjct: 417 LAQILEQSDLNAALNAYGTATRILKEKVQADIPPEILNNVGALHYRLGNLEEARKNLEES 476

Query: 475 LGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNK--VTVLFNLA 532
           L                                  R + D  H  + +N   VT  +NLA
Sbjct: 477 LA---------------------------------RSKADALHDSVYYNSIAVTTTYNLA 503

Query: 533 RLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKY 592
           RL E +     A  LY+ IL ++ +YVD YLRL  +A+ +  +  + +   +AL++N ++
Sbjct: 504 RLNEALCVFDKAEKLYKDILKEHPNYVDCYLRLGCMARDKGQIYEASDWFKDALRINNEH 563

Query: 593 PNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYFAALRNEKRAPK 651
           P+A S+LG+L L   +W   ++ F R   + +   D+Y+ ++LGN  +   L    +  +
Sbjct: 564 PDAWSLLGNLHLAKMEWGPGQKKFERILKNPSTSTDAYSLIALGNI-WLQTLHQSGKDKE 622

Query: 652 LEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFV 711
            E  H ++A  +Y +V+     N++AANG G VLA KG  + ++D+F QV+EA +     
Sbjct: 623 REKRHQDRALAMYKQVLRNDPKNIWAANGIGAVLAHKGCVNEARDIFAQVREATA----- 677

Query: 712 QMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKK 771
           +  DVW+N+AH+Y  Q  F  A++MY+NCLRKFY     ++L YL R +++A + ++ K 
Sbjct: 678 EFCDVWLNIAHIYVEQKQFVSAIQMYENCLRKFYKYHHVEVLQYLGRAYFKAGKLKEAKL 737

Query: 772 SLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSA 831
           +LL+A  +AP +  L ++  + +Q+ +   L+  + T   V   V EL  + + F +LS 
Sbjct: 738 TLLKARRVAPQDTVLLYNIALVLQRLATQILKDEKSTLTTVLQAVHELGLSHKYFQYLST 797

Query: 832 ASNLHLHGFD-EKKINTHVEYCKHLLDAAKIHREAAER---EEQQNRQRQEAARQAALAE 887
                 HG   E+   T    C+ LL  A+ H   A R   EE+  R++QE  RQA    
Sbjct: 798 ------HGDRMEQLAETEARRCQDLLSQAQYHVARARRLDEEEKMLRRKQEEERQAF--- 848

Query: 888 EARRKAEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVKARIFY 929
              R+ EEQ+K  LE+ + + E++ L++++E+ ++ K  + +
Sbjct: 849 -KMRQTEEQRK--LEEMRRQKEEEMLQKRQEYVEKTKNALVF 887


>gi|307197750|gb|EFN78899.1| RNA polymerase-associated protein CTR9-like protein [Harpegnathos
           saltator]
          Length = 1015

 Score =  518 bits (1333), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 320/942 (33%), Positives = 523/942 (55%), Gaps = 71/942 (7%)

Query: 2   ACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQ 61
             + IP+++++E + + LDQLP D  ++L IL+ E A L +W+ +A EY+KQ K+E F +
Sbjct: 3   GSIEIPLRDTDEVIELYLDQLP-DGDEVLGILRQEHAQLTIWVNLALEYYKQQKIEDFIK 61

Query: 62  ILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNK 119
           ILE   S  ID    Y D   +++  L+ L  YY      E  + +K + F  AT  Y  
Sbjct: 62  ILE---SSRIDANIDYRDYEKDQMRALDMLAAYYVQEANREKNKDKKRDLFTKATLLYTT 118

Query: 120 ASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRY 178
           A +I M++ +  +G+    L +G+ +EQA + F  VL    +N+P+LLG+AC+ FN+  Y
Sbjct: 119 ADKIIMYDQNHLLGRAYFCLLEGDKMEQADAQFNFVLNQSPNNIPSLLGKACIAFNKKDY 178

Query: 179 SDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA 238
             +L FYK+AL+ +P+CP A+RLG+G C  KL    KAR AF+RALQLD + V ALV L+
Sbjct: 179 RGALAFYKKALRTNPNCPAAVRLGMGHCFMKLNNQEKARLAFERALQLDGQCVGALVGLS 238

Query: 239 VMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVT 298
           V+ L   +   IR G++ + +A+ I     M LN+LANHFFF   +  V+ L   A   T
Sbjct: 239 VLKLNQQQPDSIRTGVQMLSKAYTIDSTNPMVLNHLANHFFFKKDYNKVQHLALHAFHNT 298

Query: 299 NHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDF 358
            +   ++ S Y LAR++H +GDY++A  YY  + +    P  F+ P++GLGQ+ +  GD 
Sbjct: 299 ENESMRAESCYQLARAFHVQGDYDQAFQYYYQATQ--FAPPVFVLPHFGLGQMYVYRGDA 356

Query: 359 RSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKIDPRDAQAFID 415
            +A   FEKVL+  P N ET+K LG +Y       K   A+  LRK  +  P D +A+I+
Sbjct: 357 ENAAQCFEKVLKAQPGNYETMKILGSLYANSSSQSKRDIAKNHLRKVTEQFPDDVEAWIE 416

Query: 416 LGELLISSDTGAALDAFKTARTLLK-KAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDA 474
           L ++L  SD  AAL+A+ TA  +LK K   ++P E+LNN+G +H+     E A ++ +++
Sbjct: 417 LAQILEQSDLNAALNAYGTATRILKEKVQADIPPEILNNVGALHYRLSSLEEARKNLEES 476

Query: 475 LGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNK--VTVLFNLA 532
           L                                  R + D  H  + +N   VT  +NLA
Sbjct: 477 LA---------------------------------RSKADALHDSVYYNSISVTTTYNLA 503

Query: 533 RLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKY 592
           R+ E +     A  LY+ IL ++ +Y+D YLRL  +A+ +  +  + +   +AL++N ++
Sbjct: 504 RMNEALCIFDRAEKLYKDILKEHPNYMDCYLRLGCMARDKGQIYEASDWFKDALRINNEH 563

Query: 593 PNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYFAALRNEKRAPK 651
           P+A S+LG+L L   +W   ++ F R   + +   D+Y+ ++LGN  +   L    +  +
Sbjct: 564 PDAWSLLGNLHLAKMEWGPGQKKFERILKNPSTSTDAYSLIALGNI-WLQTLHQSGKDKE 622

Query: 652 LEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFV 711
            E  H ++A  +Y +V+     N++AANG G VLA KG  + ++D+F QV+EA +     
Sbjct: 623 REKRHQDRALAMYKQVLRNDPKNIWAANGIGAVLAHKGCVNEARDIFAQVREATA----- 677

Query: 712 QMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKK 771
           +  DVW+N+AH+Y  Q  F  A++MY+NCLRKFY     ++L YL R +++A + ++ K 
Sbjct: 678 EFCDVWLNIAHIYVEQKQFVSAIQMYENCLRKFYRYHHVEVLQYLGRAYFKAGKLKEAKL 737

Query: 772 SLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSA 831
           +LL+A  +AP +  L ++  + +Q+ +   L+  + T   V   V EL  + + F +LSA
Sbjct: 738 TLLKARRVAPQDTVLLYNIALVLQRLATQILKDEKSTLTTVLQAVHELGLSHKYFQYLSA 797

Query: 832 ASNLHLHGFD-EKKINTHVEYCKHLLDAAKIHREAAER---EEQQNRQRQEAARQAALAE 887
                 HG   E+  +     C+ LL  A+ H   A R   EE+  R++QE  RQA    
Sbjct: 798 ------HGDRMEQLADAEARRCQDLLSQAQYHVARARRLDEEEKMLRRKQEEERQAF--- 848

Query: 888 EARRKAEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVKARIFY 929
              R+ EEQ+K  LE+ + + E++ L++++E+ ++ K  + +
Sbjct: 849 -KMRQTEEQRK--LEEMRRQKEEEMLQKRQEYVEKTKNALVF 887


>gi|340374236|ref|XP_003385644.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog
           [Amphimedon queenslandica]
          Length = 1121

 Score =  517 bits (1331), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 323/925 (34%), Positives = 511/925 (55%), Gaps = 70/925 (7%)

Query: 4   VYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQIL 63
           V IP+++++E + + +DQLP +  +++ IL+ E+APL  W+ +A  Y+KQ K  +F ++L
Sbjct: 13  VEIPLRDTDEVIELDIDQLP-EGDEVITILRDERAPLHTWVTLALHYYKQDKWSEFEKLL 71

Query: 64  EEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRI 123
           +  S  + +  Y D   +++  L++L  +Y    K E  +  K+E+F  AT  Y+ A +I
Sbjct: 72  Q-TSRTDANISYDDHEKDQMMALDSLAAHYVQKAKKERDKETKKEYFSKATLLYSTADKI 130

Query: 124 DMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSL 182
            M++    +G+  L L +G+ + Q+ + F  VL+   DN+PALLG+ACV FNR  Y  +L
Sbjct: 131 MMYDSRHLLGRAYLCLLEGDKMSQSEAQFNFVLQQSPDNLPALLGKACVSFNRKDYKGAL 190

Query: 183 EFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDL 242
             YK+AL+ +P+C G +RLG+G C  KLG + KAR AF RAL L+P+ V ALV LA+++L
Sbjct: 191 VCYKKALRSNPNCSGTVRLGMGHCFMKLGNIDKARLAFTRALDLEPQCVGALVGLAILEL 250

Query: 243 QANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGP 302
              +   I++G+E + +A+ I     M LN+LANHFFF   +  V+ L   A   T    
Sbjct: 251 NNQQHDSIKRGVELLSKAYTIDSVNPMVLNHLANHFFFKKDYVKVQHLALHAFHGTEVET 310

Query: 303 TKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSAL 362
            +S S Y LAR++H +GDY++A  YY  +  +   P  F+ P++GLGQ+ L   D  +A 
Sbjct: 311 MRSESCYQLARAFHVQGDYDQAFQYYYQAT-QFAAPG-FVLPHFGLGQMYLARQDSENAA 368

Query: 363 TNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKIDPRDAQAFIDLGEL 419
             FEKVL   P N ETLK LG +Y      EK   A   L+K  +  P D +A+I+LG +
Sbjct: 369 QCFEKVLASQPGNYETLKILGSLYANSPSSEKRATAVTHLKKVTEEFPDDVEAWIELGGI 428

Query: 420 LISSDTGAALDAFKTARTLLKKA-GEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDG 478
           L ++DT  +L A++ A  LL +  G ++P E+LNNIG +HF+ G++  A   +  +L   
Sbjct: 429 LEATDTEGSLKAYEKASQLLTETVGTDIPPEILNNIGCLHFKLGQYNEAQSHYDQSLDRC 488

Query: 479 IWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQI 538
               + D +    ++                               VTV +N+ARL E +
Sbjct: 489 TQECMQDEEYYNSLM-------------------------------VTVRYNMARLHEAL 517

Query: 539 HDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSM 598
            +   A  LY+ IL ++  Y+D YLRL  IA+ R  +  + +   EAL+ N  + +A  +
Sbjct: 518 CEFEKAETLYKEILKEHPRYIDCYLRLGCIARDRQQIYEASDWFKEALQKNQDHADAWVL 577

Query: 599 LGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHL 657
           +G+L L   +W   ++ F R   +     D+Y+ LSLGN  + A++    R    +  HL
Sbjct: 578 MGNLHLAKQEWGPGQKKFERILQNPKTKGDTYSLLSLGNV-WLASIHQPHRDKTKDKRHL 636

Query: 658 EKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVW 717
           ++A   Y  V+ + + NLYAANG G VL  KG +  ++D+F QV+EA +     ++PDVW
Sbjct: 637 DRALSYYKDVLHKDSHNLYAANGIGAVLGHKGFYREARDVFAQVREATA-----ELPDVW 691

Query: 718 INLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAI 777
           +NLAHVY  Q  +  A++MY+NCL KFY   + ++LLYLAR +++A +  DCK +L++A 
Sbjct: 692 LNLAHVYIEQKQYISAIQMYENCLGKFYNFHNTEVLLYLARAYFKAGRILDCKTTLIKAR 751

Query: 778 HLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHL 837
           H+AP +  L F+  +  +  ++STL+  + T  +V S V ELE A R F  LS   +   
Sbjct: 752 HIAPHDSLLLFNLALVQRWSASSTLKNLQSTLADVLSAVRELEMAQRNFVFLSREGD--R 809

Query: 838 HGFDEKKINTHVEYCKHLLDAAKIH--------------REAAEREEQQNRQRQ------ 877
             FD +  +   + C  LL  A+ H              RE  E+E +  RQ+Q      
Sbjct: 810 LKFDLQFASHEAKRCADLLSQAQHHVARARKSEDEERELREKQEKEMETLRQKQIEQELA 869

Query: 878 -EAARQAALAEEARRKAEEQKKYLL 901
            E  RQ  L E+AR++  ++ + LL
Sbjct: 870 KERERQLQLQEQARQEFIQKTQNLL 894


>gi|328789632|ref|XP_396581.4| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Apis
           mellifera]
          Length = 1255

 Score =  516 bits (1329), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 320/942 (33%), Positives = 523/942 (55%), Gaps = 71/942 (7%)

Query: 2   ACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQ 61
             + IP+++++E + + LDQLP +  ++L IL+ E A L++W+ +A EY+KQ K++ F +
Sbjct: 3   GSIEIPLRDTDEVIELYLDQLP-EGDEVLGILRQEHAQLNIWVNLALEYYKQHKIDDFIK 61

Query: 62  ILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNK 119
           ILE   S  ID    Y D   +++  L+ L  YY      E  + +K + F  AT  Y  
Sbjct: 62  ILE---SSRIDANIDYRDYEKDQMRALDMLAAYYVQEANREKNKDKKRDLFTKATLLYTT 118

Query: 120 ASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRY 178
           A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+P+LLG+AC+ FN+  Y
Sbjct: 119 ADKIIMYDQNHLLGRAYFCLLEGDKMDQADAQFNFVLNQSPNNIPSLLGKACIAFNKKDY 178

Query: 179 SDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA 238
             +L FYK+AL+ +P+CP A+RLG+G C  KL    KAR AF+RALQLD + V ALV L+
Sbjct: 179 RGALAFYKKALRTNPNCPAAVRLGMGHCFMKLNNQEKARLAFERALQLDGQCVGALVGLS 238

Query: 239 VMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVT 298
           V+ L   +   IR G++ + +A+ I     M LN+LANHFFF   +  V+ L   A   T
Sbjct: 239 VLKLNQQQPDSIRTGVQMLSKAYTIDSTNPMVLNHLANHFFFKKDYNKVQHLALHAFHNT 298

Query: 299 NHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDF 358
            +   ++ S Y LAR++H +GDY++A  YY  + +    P  F+ P++GLGQ+ +  GD 
Sbjct: 299 ENEAMRAESCYQLARAFHVQGDYDQAFQYYYQATQFA--PPVFVLPHFGLGQMYVYRGDA 356

Query: 359 RSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKIDPRDAQAFID 415
            +A   FEKVL+  P N ET+K LG +Y       K   A+  LRK  +  P D +A+I+
Sbjct: 357 ENAAQCFEKVLKAQPGNYETMKILGSLYANSSSQSKRDIAKNHLRKVTEQFPDDVEAWIE 416

Query: 416 LGELLISSDTGAALDAFKTARTLLK-KAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDA 474
           L ++L  SD  AAL+A+ TA  +LK K   ++P E+LNN+G +H+  G  E A ++ +++
Sbjct: 417 LAQILEQSDLNAALNAYGTATRILKEKVQADIPPEILNNVGALHYRLGNLEEARKNLEES 476

Query: 475 LGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNK--VTVLFNLA 532
           L                                  R + D  H  + +N   VT  +NLA
Sbjct: 477 LA---------------------------------RSKADALHDSVYYNSIAVTTTYNLA 503

Query: 533 RLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKY 592
           RL E +     A  LY+ IL ++ +YVD YLRL  +A+ +  +  + +   +AL++N ++
Sbjct: 504 RLNEALCIFDKAEKLYKDILKEHPNYVDCYLRLGCMARDKGQIYEASDWFKDALRINNEH 563

Query: 593 PNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYFAALRNEKRAPK 651
           P+A S+LG+L L   +W   ++ F R   + T   D+Y+ ++LGN  +   L    +   
Sbjct: 564 PDAWSLLGNLHLAKMEWGPGQKKFERILKNPTTSTDAYSLIALGNI-WLQTLHQSGKDKD 622

Query: 652 LEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFV 711
            E  H ++A  +Y +V+     N++AANG G VLA KG  + ++D+F QV+EA +     
Sbjct: 623 REKRHQDRALAMYKQVLRNDPKNIWAANGIGAVLAHKGCVNEARDIFAQVREATA----- 677

Query: 712 QMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKK 771
           +  DVW+N+AH+Y  Q  F  A++MY+NCLRKFY     ++L YL R +++A + ++ K 
Sbjct: 678 EFCDVWLNIAHIYVEQKQFVSAIQMYENCLRKFYKYHHVEVLQYLGRAYFKAGKLKEAKL 737

Query: 772 SLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSA 831
           +LL+A  +AP +  L ++  + +Q+ +   L+  + T   V   V EL  + + F +LS 
Sbjct: 738 TLLKARRVAPQDTVLLYNIALVLQRLATQILKDEKSTLTTVLQAVHELGLSHKYFQYLS- 796

Query: 832 ASNLHLHGFD-EKKINTHVEYCKHLLDAAKIHREAAER---EEQQNRQRQEAARQAALAE 887
                +HG   E+        C+ LL  A+ H   A R   EE+  R++QE  RQA    
Sbjct: 797 -----VHGDRMEQLAEAEARRCQDLLSQAQYHVARARRLDEEEKMLRRKQEEERQAF--- 848

Query: 888 EARRKAEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVKARIFY 929
              R+ EEQ+K  LE+ + + E++ L++++E+ ++ K  + +
Sbjct: 849 -KMRQTEEQRK--LEEMRRQKEEEMLQKRQEYVEKTKNALVF 887


>gi|350396433|ref|XP_003484550.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Bombus
           impatiens]
          Length = 1248

 Score =  516 bits (1329), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 320/942 (33%), Positives = 520/942 (55%), Gaps = 71/942 (7%)

Query: 2   ACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQ 61
             + IP+++++E + + LDQLP +  ++L IL+ E A L++W+ +A EY+KQ K+E F +
Sbjct: 3   GSIEIPLRDTDEVIELYLDQLP-EGDEVLGILRQEHAQLNIWVNLALEYYKQHKIEDFIK 61

Query: 62  ILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNK 119
           ILE   S  ID    Y D   +++  L+ L  YY      E  + +K + F  AT  Y  
Sbjct: 62  ILE---SSRIDANIDYRDYEKDQMRALDMLAAYYVQEANREKNKDKKRDLFTKATLLYTT 118

Query: 120 ASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRY 178
           A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+P+LLG+AC+ FN+  Y
Sbjct: 119 ADKIIMYDQNHLLGRAYFCLLEGDKMDQADAQFNFVLNQSPNNIPSLLGKACIAFNKKDY 178

Query: 179 SDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA 238
             +L FYK+AL+ +P+CP A+RLG+G C  KL    KAR AF+RALQL+ + V ALV L+
Sbjct: 179 RGALAFYKKALRTNPNCPAAVRLGMGHCFMKLNNQEKARLAFERALQLNGQCVGALVGLS 238

Query: 239 VMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVT 298
           V+ L   +   IR G++ + +A+ I     M LN+LANHFFF   +  V+ L   A   T
Sbjct: 239 VLKLNQQQPDSIRTGVQMLSKAYTIDSTNPMVLNHLANHFFFKKDYNKVQHLALHAFHNT 298

Query: 299 NHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDF 358
            +   ++ S Y LAR++H +GDY++A  YY  + +    P  F+ P++GLGQ+ +  GD 
Sbjct: 299 ENEAMRAESCYQLARAFHVQGDYDQAFQYYYQATQ--FAPPVFVLPHFGLGQMYVYRGDA 356

Query: 359 RSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKIDPRDAQAFID 415
            +A   FEKVL+  P N ET+K LG +Y       K   A+  LRK  +  P D +A+I+
Sbjct: 357 ENAAQCFEKVLKAQPGNYETMKILGSLYANSSSQSKRDIAKNHLRKVTEQFPDDVEAWIE 416

Query: 416 LGELLISSDTGAALDAFKTARTLLK-KAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDA 474
           L ++L  SD  AAL+A+ TA  +LK K   ++P E+LNN+G +H+  G  E A ++ +++
Sbjct: 417 LAQILEQSDLNAALNAYGTATRILKEKVQADIPPEILNNVGALHYRLGNLEEARKNLEES 476

Query: 475 LGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNK--VTVLFNLA 532
           L                                  R + D  H  + +N   VT  +NLA
Sbjct: 477 LA---------------------------------RSKADALHDSVYYNSIAVTTTYNLA 503

Query: 533 RLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKY 592
           RL E +     A  LY+ IL K+ +YVD YLRL  +A+ +  +  + +   +AL +N ++
Sbjct: 504 RLNEALCIFDKAEKLYKAILKKHPNYVDCYLRLGCMARDKGQIYEASDWFKDALSINNEH 563

Query: 593 PNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYFAALRNEKRAPK 651
           P+A S+LG+L L    W   ++ F R   +     D+Y+ ++LGN  +   L    +   
Sbjct: 564 PDAWSLLGNLHLVKMQWGPGQKKFERILKNPATSTDAYSLIALGNI-WLQTLHQSGKDKD 622

Query: 652 LEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFV 711
            E  H ++A  +Y +V+     N++AANG G VLA KG  + +KD+F+QV+EA +     
Sbjct: 623 REKRHQDRALAMYKQVLRNDPKNIWAANGIGAVLAHKGCVNEAKDIFSQVREATA----- 677

Query: 712 QMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKK 771
           +  DVW+N+AH+Y  Q  F  A++MY+NCLRKFY     ++L YL R +++A + ++ K 
Sbjct: 678 EFCDVWLNIAHIYVEQKQFVSAIQMYENCLRKFYKYHHVEVLQYLGRAYFKAGKLREAKL 737

Query: 772 SLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSA 831
           +LL+A  +AP +  L ++  + +Q+ +   L+  + T   V   V EL  + + F +LS 
Sbjct: 738 TLLKARRVAPQDTVLLYNIALVLQRLATQILKDEKSTLTTVLQAVHELGLSHKYFQYLST 797

Query: 832 ASNLHLHGFDEKKI-NTHVEYCKHLLDAAKIHREAAER---EEQQNRQRQEAARQAALAE 887
                 HG    ++       C+ LL  A+ H   A R   EE+  R++QE  RQA    
Sbjct: 798 ------HGDKMGQLAEAETRRCQDLLSQAQYHVARARRLDEEEKMLRRKQEEERQAF--- 848

Query: 888 EARRKAEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVKARIFY 929
              R+ EEQ+K  LE+ + + E++ L++++E+ ++ K  + +
Sbjct: 849 -KMRQTEEQRK--LEEMRRQKEEEMLQKRQEYVEKTKNALVF 887


>gi|307178712|gb|EFN67326.1| RNA polymerase-associated protein CTR9-like protein [Camponotus
           floridanus]
          Length = 1264

 Score =  516 bits (1328), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 322/942 (34%), Positives = 520/942 (55%), Gaps = 71/942 (7%)

Query: 2   ACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQ 61
             + IP+++++E + + LDQLP D  ++L IL+ E A L +W+ +A EY+KQ K+E F +
Sbjct: 3   GSIEIPLRDTDEVIELYLDQLP-DGDEVLGILRQEHAQLTIWVNLALEYYKQQKIEDFIK 61

Query: 62  ILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNK 119
           ILE   S  ID    Y D   +++  L+ L  YY      E  + +K + F  AT  Y  
Sbjct: 62  ILE---SSRIDANIDYRDYEKDQMRALDMLAAYYVQEANKEKNKDKKRDLFTKATLLYTT 118

Query: 120 ASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRY 178
           A +I M++ +  +G+    L +G+ +EQA + F  VL    +N+P+LLG+AC+ FN+  Y
Sbjct: 119 ADKIIMYDQNHLLGRAYFCLLEGDKMEQADAQFNFVLNQSPNNIPSLLGKACIAFNKKDY 178

Query: 179 SDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA 238
             +L FYK+AL+ +P CP A+RLG+G C  KL    KAR AF+RALQLD + V ALV L+
Sbjct: 179 RGALAFYKKALRTNPHCPAAVRLGMGHCFMKLNNQEKARLAFERALQLDGQCVGALVGLS 238

Query: 239 VMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVT 298
           V+ L   +   I+ G++ + +A+ I     M LN+LANHFFF   +  V+ L   A   T
Sbjct: 239 VLKLNQQQPDSIKTGVQMLSKAYTIDSTNPMVLNHLANHFFFKKDYSKVQHLALHAFHNT 298

Query: 299 NHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDF 358
            +   ++ S Y LAR++H + DY++A  YY  + +    P  F+ P++GLGQ+ +  GD 
Sbjct: 299 ENEAMRAESCYQLARAFHVQNDYDQAFQYYYQATQ--FAPPVFVLPHFGLGQMYVYRGDA 356

Query: 359 RSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKIDPRDAQAFID 415
            +A   FEKVL+  P N ET+K LG +Y       K   A+  LRK  +  P D +A+I+
Sbjct: 357 ENAAQCFEKVLKAQPGNYETMKILGSLYANSSSQSKRDIAKNHLRKVTEQFPDDVEAWIE 416

Query: 416 LGELLISSDTGAALDAFKTARTLLK-KAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDA 474
           L ++L  SD  AAL+A+ TA  +LK K   E+P E+LNN+G +H+  G  E A ++ +++
Sbjct: 417 LAQILEQSDLNAALNAYGTATRILKDKVQAEIPPEILNNVGALHYRLGNLEEARKNLEES 476

Query: 475 LGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNK--VTVLFNLA 532
           L                                  R + D  H  + +N   VT  +NLA
Sbjct: 477 LA---------------------------------RSKADALHDSIYYNSIAVTTTYNLA 503

Query: 533 RLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKY 592
           RL E +     A  LY+ IL ++ +YVD YLRL  +A+ +  +  + +   +AL++N ++
Sbjct: 504 RLNEALCIFDRAEKLYKDILKEHPNYVDCYLRLGCMARDKGQIYEASDWFKDALRINNEH 563

Query: 593 PNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYFAALRNEKRAPK 651
           P+A S+LG+L L   +W   ++ F R   + T   D+Y+ ++LGN  +   L    +  +
Sbjct: 564 PDAWSLLGNLHLAKMEWGPGQKKFERILKNPTTSTDAYSLIALGNI-WLQTLHQSGKDKE 622

Query: 652 LEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFV 711
            E  H ++A  +Y +V+     N++AANG G VLA KG  + ++D+F QV+EA +     
Sbjct: 623 REKRHQDRALAMYKQVLRNDPKNIWAANGIGAVLAHKGCVNEARDIFAQVREATA----- 677

Query: 712 QMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKK 771
           +  DVW+N+AH+Y  Q  F  A++MY+NCLRKFY     ++L YL R +++A + ++ K 
Sbjct: 678 EFCDVWLNIAHIYVEQKQFVSAIQMYENCLRKFYRYHHVEVLQYLGRAYFKAGKLKEAKL 737

Query: 772 SLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSA 831
           +LL+A  +AP +  L ++  + +Q+ +   L+  + T   V   V EL  + + F +LS 
Sbjct: 738 TLLKARRVAPQDTVLLYNIALVLQRLATQILKDEKSTLTTVLQAVHELGLSHKYFQYLST 797

Query: 832 ASNLHLHGFD-EKKINTHVEYCKHLLDAAKIHREAAER---EEQQNRQRQEAARQAALAE 887
                 HG   E+        C+ LL  A+ H   A R   EE+  R++QE  RQA    
Sbjct: 798 ------HGDRMEQLAEGEARRCQDLLSQAQYHVARARRLDEEEKMLRRKQEEERQAF--- 848

Query: 888 EARRKAEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVKARIFY 929
              R+ EEQ+K  LE+ + + E++ L++++E+ ++ K  + +
Sbjct: 849 -KMRQTEEQRK--LEEMRRQKEEEMLQKRQEYVEKTKNALVF 887


>gi|380026141|ref|XP_003696818.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymerase-associated protein
           CTR9 homolog [Apis florea]
          Length = 1254

 Score =  514 bits (1325), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 320/942 (33%), Positives = 522/942 (55%), Gaps = 71/942 (7%)

Query: 2   ACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQ 61
             + IP+++++E + + LDQLP +  ++L IL+ E A L++W+ +A EY+KQ K++ F +
Sbjct: 3   GSIEIPLRDTDEVIELYLDQLP-EGDEVLGILRQEHAQLNIWVNLALEYYKQHKIDDFIK 61

Query: 62  ILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNK 119
           ILE   S  ID    Y D   +++  L+ L  YY      E  + +K + F  AT  Y  
Sbjct: 62  ILE---SSRIDANIDYRDYEKDQMRALDMLAAYYVQEANREKNKDKKRDLFTKATLLYTT 118

Query: 120 ASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRY 178
           A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+P+LLG+AC+ FN+  Y
Sbjct: 119 ADKIIMYDQNHLLGRAYFCLLEGDKMDQADAQFNFVLNQSPNNIPSLLGKACIAFNKKDY 178

Query: 179 SDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA 238
             +L FYK+AL+ +P+CP A+RLG+G C  KL    KAR AF+RALQLD + V ALV L+
Sbjct: 179 RGALAFYKKALRTNPNCPAAVRLGMGHCFMKLNNQEKARLAFERALQLDGQCVGALVGLS 238

Query: 239 VMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVT 298
           V+ L   +   IR G++ + +A+ I     M LN+LANHFF    +  V+ L   A   T
Sbjct: 239 VLKLNQQQPDSIRTGVQMLSKAYTIDSTNPMVLNHLANHFFXKKDYNKVQHLALHAFHNT 298

Query: 299 NHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDF 358
            +   ++ S Y LAR++H +GDY++A  YY  + +    P  F+ P++GLGQ+ +  GD 
Sbjct: 299 ENEAMRAESCYQLARAFHVQGDYDQAFQYYYQATQFA--PPVFVLPHFGLGQMYVYRGDA 356

Query: 359 RSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKIDPRDAQAFID 415
            +A   FEKVL+  P N ET+K LG +Y       K   A+  LRK  +  P D +A+I+
Sbjct: 357 ENAAQCFEKVLKAQPGNYETMKILGSLYANSSSQSKRDIAKNHLRKVTEQFPDDVEAWIE 416

Query: 416 LGELLISSDTGAALDAFKTARTLLK-KAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDA 474
           L ++L  SD  AAL+A+ TA  +LK K   ++P E+LNN+G +H+  G  E A ++ +++
Sbjct: 417 LAQILEQSDLNAALNAYGTATRILKEKVQADIPPEILNNVGALHYRLGNLEEARKNLEES 476

Query: 475 LGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNK--VTVLFNLA 532
           L                                  R + D  H  + +N   VT  +NLA
Sbjct: 477 LA---------------------------------RSKADALHDSVYYNSIAVTTTYNLA 503

Query: 533 RLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKY 592
           RL E +     A  LY+ IL ++ +YVD YLRL  +A+ +  +  + +   +AL++N ++
Sbjct: 504 RLNEALCIFDKAEKLYKDILKEHPNYVDCYLRLGCMARDKGQIYEASDWFKDALRINNEH 563

Query: 593 PNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYFAALRNEKRAPK 651
           P+A S+LG+L L   +W   ++ F R   + T   D+Y+ ++LGN  +   L    +   
Sbjct: 564 PDAWSLLGNLHLAKMEWGPGQKKFERILKNPTTSTDAYSLIALGNI-WLQTLHQSGKDKD 622

Query: 652 LEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFV 711
            E  H ++A  +Y +V+     N++AANG G VLA KG  + ++D+F QV+EA +     
Sbjct: 623 REKRHQDRALAMYKQVLRNDPKNIWAANGIGAVLAHKGCVNEARDIFAQVREATA----- 677

Query: 712 QMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKK 771
           +  DVW+N+AH+Y  Q  F  A++MY+NCLRKFY     ++L YL R +++A + ++ K 
Sbjct: 678 EFCDVWLNIAHIYVEQKQFVSAIQMYENCLRKFYKYHHVEVLQYLGRAYFKAGKLKEAKL 737

Query: 772 SLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSA 831
           +LL+A  +AP +  L ++  + +Q+ +   L+  + T   V   V EL  + + F +LSA
Sbjct: 738 TLLKARRVAPQDTVLLYNIALVLQRLATQILKDEKSTLTTVLQAVHELGLSHKYFQYLSA 797

Query: 832 ASNLHLHGFD-EKKINTHVEYCKHLLDAAKIHREAAER---EEQQNRQRQEAARQAALAE 887
                 HG   E+        C+ LL  A+ H   A R   EE+  R++QE  RQA    
Sbjct: 798 ------HGDRMEQLAEAEARRCQDLLSQAQYHVARARRLDEEEKMLRRKQEEERQAF--- 848

Query: 888 EARRKAEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVKARIFY 929
              R+ EEQ+K  LE+ + + E++ L++++E+ ++ K  + +
Sbjct: 849 -KMRQTEEQRK--LEEMRRQKEEEMLQKRQEYVEKTKNALVF 887


>gi|340710827|ref|XP_003393985.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Bombus
           terrestris]
          Length = 1190

 Score =  514 bits (1325), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 319/941 (33%), Positives = 519/941 (55%), Gaps = 69/941 (7%)

Query: 2   ACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQ 61
             + IP+++++E + + LDQLP +  ++L IL+ E A L++W+ +A EY+KQ K+E F +
Sbjct: 3   GSIEIPLRDTDEVIELYLDQLP-EGDEVLGILRQEHAQLNIWVNLALEYYKQHKIEDFIK 61

Query: 62  ILEEG-SSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKA 120
           ILE   +   ID  Y D   +++  L+ L  YY      E  + +K + F  AT  Y  A
Sbjct: 62  ILESSRTDANID--YRDYEKDQMRGLDMLAAYYVQEANREKNKDKKRDLFTKATLLYTTA 119

Query: 121 SRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYS 179
            +I M++ +  +G+    L +G+ ++QA + F  VL    +N+P+LLG+AC+ FN+  Y 
Sbjct: 120 DKIIMYDQNHLLGRAYFCLLEGDKMDQADAQFNFVLNQSPNNIPSLLGKACIAFNKKDYR 179

Query: 180 DSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAV 239
            +L FYK+AL+ +P+CP A+RLG+G C  KL    KAR AF+RALQLD + V ALV L+V
Sbjct: 180 GALAFYKKALRTNPNCPAAVRLGMGHCFMKLNNQEKARLAFERALQLDGQCVGALVGLSV 239

Query: 240 MDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTN 299
           + L   +   IR G++ + +A+ I     M LN+LANHFFF   +  V+ L   A   T 
Sbjct: 240 LKLNQQQPDSIRTGVQMLSKAYTIDSTNPMVLNHLANHFFFKKDYNKVQHLALHAFHNTE 299

Query: 300 HGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFR 359
           +   ++ S Y LAR++H +GDY++A  YY  + +    P  F+ P++GLGQ+ +  GD  
Sbjct: 300 NEAMRAESCYQLARAFHVQGDYDQAFQYYYQATQFA--PPVFVLPHFGLGQMYVYRGDAE 357

Query: 360 SALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKIDPRDAQAFIDL 416
           +A   FEKVL+  P N ET+K LG +Y       K   A+  LRK  +  P D +A+I+L
Sbjct: 358 NAAQCFEKVLKAQPGNYETMKILGSLYANSSSQSKRDIAKNHLRKVTEQFPDDVEAWIEL 417

Query: 417 GELLISSDTGAALDAFKTARTLLK-KAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
            ++L  SD  AAL+A+ TA  +LK K   ++P E+LNN+G +H+  G  E A ++ +++L
Sbjct: 418 AQILEQSDLNAALNAYGTATRILKEKVQADIPPEILNNVGALHYRLGNLEEARKNLEESL 477

Query: 476 GDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNK--VTVLFNLAR 533
                                             R + D  H  + +N   VT  +NLAR
Sbjct: 478 A---------------------------------RSKADALHDSVYYNSIAVTTTYNLAR 504

Query: 534 LLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYP 593
           L E +     A  LY+ IL K+ +YVD YLRL  +A+ +  +  + +   +AL +N ++P
Sbjct: 505 LNEALCIFDKAEKLYKAILKKHPNYVDCYLRLGCMARDKGQIYEASDWFKDALSINNEHP 564

Query: 594 NALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKL 652
           +A S+LG+L L    W   ++ F R   +     D+Y+ ++LGN  +   L    +    
Sbjct: 565 DAWSLLGNLHLVKMQWGPGQKKFERILKNPATSTDAYSLIALGNI-WLQTLHQSGKDKDR 623

Query: 653 EATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQ 712
           E  H ++A  +Y +V+     N++AANG G VLA KG  + ++D+F QV+EA +     +
Sbjct: 624 EKRHQDRALAMYKQVLRNDPKNIWAANGIGAVLAHKGCVNEARDIFAQVREATA-----E 678

Query: 713 MPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKS 772
             DVW+N+AH+Y  Q  F  A++MY+NCLRKFY     ++L YL R +++A + ++ K +
Sbjct: 679 FCDVWLNIAHIYVEQKQFVSAIQMYENCLRKFYKYHHVEVLQYLGRAYFKAGKLKEAKLT 738

Query: 773 LLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAA 832
           LL+A  +AP +  L ++  + +Q+ +   L+  + T   V   V EL  + + F +LS  
Sbjct: 739 LLKARRVAPQDTVLLYNIALVLQRLATQILKDEKSTLTTVLQAVHELGLSHKYFQYLST- 797

Query: 833 SNLHLHGFDEKKI-NTHVEYCKHLLDAAKIHREAAER---EEQQNRQRQEAARQAALAEE 888
                HG    ++       C+ LL  A+ H   A R   EE+  R++QE  RQA     
Sbjct: 798 -----HGDKMGQLAEAETRRCQDLLSQAQYHVARARRLDEEEKMLRRKQEEERQAF---- 848

Query: 889 ARRKAEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVKARIFY 929
             R+ EEQ+K  LE+ + + E++ L++++E+ ++ K  + +
Sbjct: 849 KMRQTEEQRK--LEEMRRQKEEEMLQKRQEYVEKTKNALVF 887


>gi|322796271|gb|EFZ18847.1| hypothetical protein SINV_80216 [Solenopsis invicta]
          Length = 1022

 Score =  510 bits (1313), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 318/929 (34%), Positives = 515/929 (55%), Gaps = 71/929 (7%)

Query: 15  VRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQILEEGSSPEIDEY 74
           + + LDQLP +  ++L IL+ E A L++W+ +A EY+KQ K++ F +ILE   S  ID  
Sbjct: 2   IELYLDQLP-EGDEVLGILRQEHAQLNIWVNLALEYYKQQKIDDFIKILE---SSRIDAN 57

Query: 75  --YADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWV 132
             Y D   +++  L+ L  YY      E  + +K + F  AT  Y  A +I M++ +  +
Sbjct: 58  IDYRDYEKDQMRALDMLAAYYVQEANKEKNKDKKRDLFTKATLLYTTADKIIMYDQNHLL 117

Query: 133 GKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQV 191
           G+    L +G+ ++QA + F  VL    +N+P+LLG+AC+ FN+  Y  +L FYK+AL+ 
Sbjct: 118 GRAYFCLLEGDKMDQADAQFNFVLNQSPNNIPSLLGKACIAFNKKDYRGALAFYKKALRT 177

Query: 192 HPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIR 251
           +P+CP A+RLG+G C  KL    KAR AF+RALQLD + V ALV L+V+ L   +   IR
Sbjct: 178 NPNCPAAVRLGMGHCFMKLNNQEKARLAFERALQLDGQCVGALVGLSVLKLNQQQPESIR 237

Query: 252 KGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNL 311
            G++ + +A+ I     M LN+LANHFFF   +  V+ L   A   T +   ++ S Y L
Sbjct: 238 TGVQMLSKAYTIDSTNPMVLNHLANHFFFKKDYNKVQHLALHAFHNTENEAMRAESCYQL 297

Query: 312 ARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEI 371
           AR++H +GDY++A  YY  + +    P  F+ P++GLGQ+ +  GD  +A   FEKVL+ 
Sbjct: 298 ARAFHVQGDYDQAFQYYYQATQFA--PPVFVLPHFGLGQMYVYRGDAENAAQCFEKVLKA 355

Query: 372 YPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKIDPRDAQAFIDLGELLISSDTGAA 428
            P N ET+K LG +Y       K   A+  LRK  +  P D +A+I+L ++L  SD  AA
Sbjct: 356 QPGNYETMKILGSLYANSSSQSKRDIAKNHLRKVTEQFPDDVEAWIELAQILEQSDLNAA 415

Query: 429 LDAFKTARTLLK-KAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSK 487
           L+A+ TA  +LK K   ++P E+LNN+G +H+  G  E A Q+ +++L            
Sbjct: 416 LNAYGTATRILKEKVQADIPPEILNNVGALHYRLGNLEEARQNLEESLA----------- 464

Query: 488 TKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNK--VTVLFNLARLLEQIHDTVAAS 545
                                 R + D  H  + +N   VT  +NLARL E +     A 
Sbjct: 465 ----------------------RSKADALHDSVYYNSIAVTTTYNLARLNEALCIFDRAE 502

Query: 546 VLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELK 605
            LY+ IL ++ +YVD YLRL  +A+ +  +  + +   +AL++N ++P+A S+LG+L L 
Sbjct: 503 KLYKDILKEHPNYVDCYLRLGCMARDKGQIYEASDWFKDALRINNEHPDAWSLLGNLHLA 562

Query: 606 NDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELY 664
             +W   ++ F R   + T   D+Y+ ++LGN  +   L    +  + E  H ++A  +Y
Sbjct: 563 KMEWGPGQKKFERILKNPTTSTDAYSLIALGNI-WLQTLHQSGKDKEREKRHQDRALAMY 621

Query: 665 TRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVY 724
            +V+     N++A+NG G VLA KG  + ++D+F QV+EA +     +  DVW+N+AH+Y
Sbjct: 622 KQVLRNDPKNIWASNGIGAVLAHKGCVNEARDIFAQVREATA-----EFCDVWLNIAHIY 676

Query: 725 FAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNY 784
             Q  F  A++MY+NCLRKFY     ++L YL R +++A + ++ K +LL+A  +AP + 
Sbjct: 677 VEQKQFVSAIQMYENCLRKFYKYHHVEVLQYLGRAYFKAGKLKESKLTLLKARRVAPQDT 736

Query: 785 TLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGFD-EK 843
            L ++  + +Q+ +   L+  + T   V   V EL  + + F +LSA      HG   E+
Sbjct: 737 VLLYNIALVLQRLATQILKDEKSTLTTVLQAVHELGLSHKYFQYLSA------HGDRMEQ 790

Query: 844 KINTHVEYCKHLLDAAKIHREAAER---EEQQNRQRQEAARQAALAEEARRKAEEQKKYL 900
                   C+ LL  A+ H   A R   EE+  R++QE  RQA       R+ EEQ+K  
Sbjct: 791 LAEGEARRCQDLLSQAQYHVARARRLDEEEKMLRRKQEEERQAF----KMRQTEEQRK-- 844

Query: 901 LEKRKLEDEQKRLRQQEEHFQRVKARIFY 929
           LE+ + + E++ L++++E+ ++ K  + +
Sbjct: 845 LEEMRRQKEEEMLQKRQEYVEKTKNALVF 873


>gi|28574254|ref|NP_788449.1| CG2469, isoform B [Drosophila melanogaster]
 gi|28574256|ref|NP_788448.1| CG2469, isoform A [Drosophila melanogaster]
 gi|7292059|gb|AAF47472.1| CG2469, isoform B [Drosophila melanogaster]
 gi|17862386|gb|AAL39670.1| LD24034p [Drosophila melanogaster]
 gi|23092752|gb|AAN11469.1| CG2469, isoform A [Drosophila melanogaster]
 gi|220947488|gb|ACL86287.1| CG2469-PA [synthetic construct]
          Length = 1150

 Score =  510 bits (1313), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 318/923 (34%), Positives = 507/923 (54%), Gaps = 67/923 (7%)

Query: 3   CVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQI 62
           C+ IP+Q+++E + V  DQLP D  ++L ILK E+APL +W+ +A  Y+KQ K E F  +
Sbjct: 4   CIEIPLQDTDEVIEVDPDQLP-DCPEVLSILKQERAPLHVWVNVALAYYKQKKTEDFVTL 62

Query: 63  LEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASR 122
           LEE  S +  + Y D   + +  L+ L  +Y      E  + +K E F+ AT  Y  A +
Sbjct: 63  LEESRSDDATKEYRDSDKDLMRALDMLAAHYVQEAYREKSKDKKRELFMKATNLYTSADK 122

Query: 123 IDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDS 181
           I M++ S  +G+    L +G+ ++QA + F  VL     N+P+LLG+AC+ FNR  Y  +
Sbjct: 123 IIMYDQSHLLGRAYFCLLEGDKMDQADAQFNFVLNQSPSNIPSLLGKACIAFNRKDYRGA 182

Query: 182 LEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMD 241
           + FYK+AL+ +P+CP  +R+G+  C  K+G   KA+ AF+RALQLD + V AL+ LAV+ 
Sbjct: 183 MAFYKKALRTNPNCPANVRIGMAHCFLKMGNPEKAKLAFERALQLDQQCVGALIGLAVLK 242

Query: 242 LQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG 301
           L   E    + G++ + +A+ I     M LN+LANHFFF   +  V  L   A   T + 
Sbjct: 243 LNQLEPESNKLGVQMLSKAYTIDNANPMVLNHLANHFFFKKDYQKVHHLALHAFHNTENE 302

Query: 302 PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSA 361
             ++ S Y LARS+H++ DY++A  YY  S +    P  F+ P+YGLGQ+ +  GD  +A
Sbjct: 303 AMRAESCYQLARSFHAQSDYDQAFQYYYQSTQIA--PANFVLPHYGLGQMYIYRGDTENA 360

Query: 362 LTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKIDPRDAQAFIDLGE 418
              FEKVL+I P N ET+K LG +Y       K   A+  L+K  +  P D +A+I+L +
Sbjct: 361 AQCFEKVLKIQPGNYETMKILGSLYAHSNSQTKRDMAKTHLKKVTEQFPEDIEAWIELAQ 420

Query: 419 LLISSDTGAALDAFKTARTLLK-KAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGD 477
           +L  +D  A+L A+ TA ++L+ KA  E+P E+ NN+  +H+  G  + A  + + AL  
Sbjct: 421 ILEQNDLQASLSAYGTASSILRDKAKYEIPAEIQNNVASLHYRLGNLKMAKLTLESAL-- 478

Query: 478 GIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQ 537
                    K  T  +D        KD++ +   +            VT+ +NLARL E 
Sbjct: 479 ---------KHATSEMD--------KDVKYYESIQ------------VTMKYNLARLNEA 509

Query: 538 IHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALS 597
           +     A  LY+ IL ++ +Y+D YLRL  +A+ +  + ++ +   +AL +N   P+A S
Sbjct: 510 MSSYDVADKLYKEILKEHPNYIDCYLRLGCMARDKGLIFVASDFFKDALNINNDNPDARS 569

Query: 598 MLGDLELKNDDWVKAKETFRAA-SDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATH 656
           +LG+L L    +   ++ F     + +   D+Y+ ++LGN++    L    R  + E  H
Sbjct: 570 LLGNLHLAKMQFALGQKNFETILKNPSTSTDAYSLIALGNFS-LQTLHQPSRDKEKERKH 628

Query: 657 LEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDV 716
            EKA  ++ +V+     N++A NG G VLA KG    ++D+F QV+EA +        DV
Sbjct: 629 QEKALAIFKQVLRNDPRNIWATNGIGAVLAHKGCVIEARDIFAQVREATAD-----FCDV 683

Query: 717 WINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRA 776
           W+N+AHVY  Q  +  A++MY+NC++KFY + + +++ YLAR +  A +  D K  LL+A
Sbjct: 684 WLNIAHVYVEQKQYISAIQMYENCMKKFYKHNNVEVMQYLARAYLRANKLVDAKAVLLKA 743

Query: 777 IHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLH 836
             +AP +  L F+  V + + + + L+  + T + V   V ELE A + F +LS      
Sbjct: 744 RRVAPQDTVLLFNIAVVLSRLAMAILKDEKSTLEIVLQAVHELELAQKYFQYLS------ 797

Query: 837 LHGFDEKKINTHV-----EYCKHLLDAAKIHREAAER---EEQQNRQRQEAARQA---AL 885
           +HG D+ + N  V       C+ LL  A+ H   A R   EE+  R++QE  R+A    +
Sbjct: 798 VHG-DKNRFNIEVAGIEASTCQDLLSQAQYHVGRARRIDEEERSLRRKQEEEREAFKIKV 856

Query: 886 AEEARRKAEEQKKY---LLEKRK 905
           AE+ +R+ EE K     LL KR+
Sbjct: 857 AEQRKRREEEAKTSRDQLLAKRQ 879


>gi|194748531|ref|XP_001956698.1| GF24452 [Drosophila ananassae]
 gi|190623980|gb|EDV39504.1| GF24452 [Drosophila ananassae]
          Length = 1164

 Score =  510 bits (1313), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 317/923 (34%), Positives = 509/923 (55%), Gaps = 67/923 (7%)

Query: 3   CVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQI 62
           C+ IP+Q+++E + V  +QLP D  ++L ILK E+APL +W+ +A  Y+KQ K E F  +
Sbjct: 4   CIEIPLQDTDEVIEVDPEQLP-DCPEVLSILKQERAPLHVWVNVALAYYKQKKTEDFVTL 62

Query: 63  LEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASR 122
           LEE  S E ++ Y D   + +  L+ L  +Y      E  + +K E F+ AT  Y  A +
Sbjct: 63  LEESRSDEANKEYRDSDKDLMRALDMLAAHYVQEAYREKSKDKKRELFMKATNLYTSADK 122

Query: 123 IDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDS 181
           I M++ S  +G+    L +G+ ++QA + F  VL     N+P+LLG+AC+ FNR  Y  +
Sbjct: 123 IIMYDQSHLLGRAYFCLLEGDKMDQADAQFNFVLNQSPSNIPSLLGKACIAFNRKDYRGA 182

Query: 182 LEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMD 241
           + FYK+AL+ +P+CP  +R+G+  C  K+G   KA+ AF+RALQLD + V AL+ LAV+ 
Sbjct: 183 MAFYKKALRTNPNCPANVRIGMAHCFLKMGNPEKAKLAFERALQLDQQCVGALIGLAVLK 242

Query: 242 LQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG 301
           L   E    + G++ + +A+ I     M LN+LANHFFF   +  V  L   A   T + 
Sbjct: 243 LNQLEPESNKLGVQMLSKAYTIDNANPMVLNHLANHFFFKKDYQKVHHLALHAFHNTENE 302

Query: 302 PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSA 361
             ++ S Y LARS+H++ DY++A  YY  S +    P  F+ P+YGLGQ+ +  GD  +A
Sbjct: 303 AMRAESCYQLARSFHAQSDYDQAFQYYYQSTQIA--PANFVLPHYGLGQMYIYRGDTENA 360

Query: 362 LTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKIDPRDAQAFIDLGE 418
              FEKVL+I P N ET+K LG +Y       K   A+  L+K  +  P D +A+I+L +
Sbjct: 361 AQCFEKVLKIQPGNYETMKILGSLYAHSNSQTKRDMAKTHLKKVTEQFPEDIEAWIELAQ 420

Query: 419 LLISSDTGAALDAFKTARTLLK-KAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGD 477
           +L  +D  A+L+A+ TA ++L+ KA  E+P E+ NN+  +H+  G  + A ++ + AL  
Sbjct: 421 ILEQNDLQASLNAYGTASSILREKAKYEIPAEIQNNVASLHYRLGNLKMAKETLESAL-- 478

Query: 478 GIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQ 537
                    K  T  +D        KD++ +   +            VT+ +NLARL E 
Sbjct: 479 ---------KHATSEMD--------KDVKYYESIQ------------VTMKYNLARLNEA 509

Query: 538 IHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALS 597
           +     A  LY+ IL ++ +Y+D YLRL  +A+ +  + ++ +   +AL +N   P+A S
Sbjct: 510 MSSYDVADKLYKEILKEHPNYIDCYLRLGCMARDKGLIFVASDFFKDALNINNDNPDARS 569

Query: 598 MLGDLELKNDDWVKAKETFRAA-SDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATH 656
           +LG+L L    +   ++ F     +     D+Y+ ++LGN++    L    R  + E  H
Sbjct: 570 LLGNLHLAKMQFALGQKNFETILKNPATSTDAYSLIALGNFS-LQTLHQPSRDKEKERKH 628

Query: 657 LEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDV 716
            EKA  ++ +V+     N++A NG G VLA KG    ++D+F QV+EA +        DV
Sbjct: 629 QEKALAIFKQVLRNDPRNIWATNGIGAVLAHKGCVIEARDIFAQVREATAD-----FCDV 683

Query: 717 WINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRA 776
           W+N+AHVY  Q  +  A++MY+NC++KFY + + +++ YLAR +  A +  + K  LL+A
Sbjct: 684 WLNIAHVYVEQKQYISAIQMYENCMKKFYKHNNVEVMQYLARAYLRANKLVEAKAVLLKA 743

Query: 777 IHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLH 836
             +AP +  L F+  V + + + + L+  + T + V   V ELE A + F +LS      
Sbjct: 744 RRVAPQDTVLLFNIAVVLSRLAMAILKDEKSTLEVVLQAVHELELAQKYFQYLS------ 797

Query: 837 LHGFDEKKINTHV-----EYCKHLLDAAKIHREAAER---EEQQNRQRQEAARQA---AL 885
           +HG D+ + N  V       C+ LL  A+ H   A R   EE+  R++QE  R+A    +
Sbjct: 798 VHG-DKNRFNIEVAGIEANTCQDLLSQAQYHVGRARRIDEEERSLRRKQEEEREAFKLKV 856

Query: 886 AEEARRKAEEQKKY---LLEKRK 905
           AE+ +R+ EE K     LL KR+
Sbjct: 857 AEQRKRREEEAKTSRDQLLAKRQ 879


>gi|195336539|ref|XP_002034893.1| GM14398 [Drosophila sechellia]
 gi|194127986|gb|EDW50029.1| GM14398 [Drosophila sechellia]
          Length = 1152

 Score =  509 bits (1312), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 317/923 (34%), Positives = 508/923 (55%), Gaps = 67/923 (7%)

Query: 3   CVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQI 62
           C+ IP+Q+++E + V  DQLP D  ++L ILK E+APL +W+ +A  Y+KQ K E F  +
Sbjct: 4   CIEIPLQDTDEVIEVDPDQLP-DCPEVLSILKQERAPLHVWVNVALAYYKQKKTEDFVTL 62

Query: 63  LEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASR 122
           LEE  + +  + Y D   + +  L+ L  +Y      E  + +K E F+ AT  Y  A +
Sbjct: 63  LEESRNDDATKEYRDSDKDLMRALDMLAAHYVQEAYREKSKDKKRELFMKATNLYTSADK 122

Query: 123 IDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDS 181
           I M++ S  +G+    L +G+ ++QA + F  VL     N+P+LLG+AC+ FNR  Y  +
Sbjct: 123 IIMYDQSHLLGRAYFCLLEGDKMDQADAQFNFVLNQSPSNIPSLLGKACIAFNRKDYRGA 182

Query: 182 LEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMD 241
           + FYK+AL+ +P+CP  +R+G+  C  K+G   KA+ AF+RALQLD + V AL+ LAV+ 
Sbjct: 183 MAFYKKALRTNPNCPANVRIGMAHCFLKMGNPEKAKLAFERALQLDQQCVGALIGLAVLK 242

Query: 242 LQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG 301
           L   E    + G++ + +A+ I     M LN+LANHFFF   +  V  L   A   T + 
Sbjct: 243 LNQLEPESNKLGVQMLSKAYTIDNANPMVLNHLANHFFFKKDYQKVHHLALHAFHNTENE 302

Query: 302 PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSA 361
             ++ S Y LARS+H++ DY++A  YY  S +    P  F+ P+YGLGQ+ +  GD  +A
Sbjct: 303 AMRAESCYQLARSFHAQSDYDQAFQYYYQSTQIA--PANFVLPHYGLGQMYIYRGDTENA 360

Query: 362 LTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKIDPRDAQAFIDLGE 418
              FEKVL+I P N ET+K LG +Y       K   A+  L+K  +  P D +A+I+L +
Sbjct: 361 AQCFEKVLKIQPGNYETMKILGSLYAHSNSQTKRDMAKTHLKKVTEQFPEDIEAWIELAQ 420

Query: 419 LLISSDTGAALDAFKTARTLLK-KAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGD 477
           +L  +D  A+L A+ TA ++L+ KA  E+P E+ NN+  +H+  G  + A ++ + AL  
Sbjct: 421 ILEQNDLQASLSAYGTASSILRDKAKYEIPAEIQNNVASLHYRLGNLKMAKRTLESAL-- 478

Query: 478 GIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQ 537
                    K  T  +D        KD++ +   +            VT+ +NLARL E 
Sbjct: 479 ---------KHATSEMD--------KDVKYYESIQ------------VTMKYNLARLNEA 509

Query: 538 IHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALS 597
           +     A  LY+ IL ++ +Y+D YLRL  +A+ +  + ++ +   +AL +N   P+A S
Sbjct: 510 MSSYDVADKLYKEILKEHPNYIDCYLRLGCMARDKGLIFVASDFFKDALNINNDNPDARS 569

Query: 598 MLGDLELKNDDWVKAKETFRAA-SDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATH 656
           +LG+L L    +   ++ F     + +   D+Y+ ++LGN++    L    R  + E  H
Sbjct: 570 LLGNLHLAKMQFALGQKNFETILKNPSTSTDAYSLIALGNFS-LQTLHQPSRDKEKERKH 628

Query: 657 LEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDV 716
            EKA  ++ +V+     N++A NG G VLA KG    ++D+F QV+EA +        DV
Sbjct: 629 QEKALAIFKQVLRNDPRNIWATNGIGAVLAHKGCVIEARDIFAQVREATAD-----FCDV 683

Query: 717 WINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRA 776
           W+N+AHVY  Q  +  A++MY+NC++KFY + + +++ YLAR +  A +  D K  LL+A
Sbjct: 684 WLNIAHVYVEQKQYISAIQMYENCMKKFYKHNNVEVMQYLARAYLRANKLVDAKAVLLKA 743

Query: 777 IHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLH 836
             +AP +  L F+  V + + + + L+  + T + V   V ELE A + F +LS      
Sbjct: 744 RRVAPQDTVLLFNIAVVLSRLAMAILKDEKSTLEIVLQAVHELELAQKYFQYLS------ 797

Query: 837 LHGFDEKKINTHV-----EYCKHLLDAAKIHREAAER---EEQQNRQRQEAARQA---AL 885
           +HG D+ + N  V       C+ LL  A+ H   A R   EE+  R++QE  R+A    +
Sbjct: 798 VHG-DKNRFNIEVAGIEASTCQDLLSQAQYHVGRARRIDEEERSLRRKQEEEREAFKIKV 856

Query: 886 AEEARRKAEEQKKY---LLEKRK 905
           AE+ +R+ EE K     LL KR+
Sbjct: 857 AEQRKRREEEAKTSRDQLLAKRQ 879


>gi|195490356|ref|XP_002093105.1| GE21142 [Drosophila yakuba]
 gi|194179206|gb|EDW92817.1| GE21142 [Drosophila yakuba]
          Length = 1148

 Score =  509 bits (1311), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 317/923 (34%), Positives = 507/923 (54%), Gaps = 67/923 (7%)

Query: 3   CVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQI 62
           C+ IP+Q+++E + V  DQLP D  ++L ILK E+APL +W+ +A  Y+KQ K E F  +
Sbjct: 4   CIEIPLQDTDEVIEVDPDQLP-DCPEVLSILKQERAPLHVWVNVALAYYKQKKTEDFVTL 62

Query: 63  LEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASR 122
           LEE  S +  + Y D   + +  L+ L  +Y      E  + +K E F+ AT  Y  A +
Sbjct: 63  LEESRSDDATKEYRDSDKDLMRALDMLAAHYVQEAYREKSKDKKRELFMKATNLYTSADK 122

Query: 123 IDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDS 181
           I M++ S  +G+    L +G+ ++QA + F  VL     N+P+LLG+AC+ FNR  Y  +
Sbjct: 123 IIMYDQSHLLGRAYFCLLEGDKMDQADAQFNFVLNQSPSNIPSLLGKACIAFNRKDYRGA 182

Query: 182 LEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMD 241
           + FYK+AL+ +P+CP  +R+G+  C  K+G   KA+ AF+RALQLD + V AL+ LAV+ 
Sbjct: 183 MAFYKKALRTNPNCPANVRIGMAHCFLKMGNPEKAKLAFERALQLDQQCVGALIGLAVLK 242

Query: 242 LQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG 301
           L   E    + G++ + +A+ I     M LN+LANHFFF   +  V  L   A   T + 
Sbjct: 243 LNQLEPESNKLGVQMLSKAYTIDNANPMVLNHLANHFFFKKDYQKVHHLALHAFHNTENE 302

Query: 302 PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSA 361
             ++ S Y LARS+H++ DY++A  YY  S +    P  F+ P+YGLGQ+ +  GD  +A
Sbjct: 303 AMRAESCYQLARSFHAQSDYDQAFQYYYQSTQIA--PANFVLPHYGLGQMYIYRGDTENA 360

Query: 362 LTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKIDPRDAQAFIDLGE 418
              FEKVL+I P N ET+K LG +Y       K   A+  L+K  +  P D +A+I+L +
Sbjct: 361 AQCFEKVLKIQPGNYETMKILGSLYAHSNSQTKRDMAKTHLKKVTEQFPEDIEAWIELAQ 420

Query: 419 LLISSDTGAALDAFKTARTLLK-KAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGD 477
           +L  +D  A+L+A+ TA ++L+ KA  E+P E+ NN+  +H+  G  + A  + + AL  
Sbjct: 421 ILEQNDLQASLNAYGTASSILRDKAKYEIPAEIQNNVASLHYRLGNLKMAKDTLESAL-- 478

Query: 478 GIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQ 537
                    K  T  +D        KD++ +   +            VT+ +NLARL E 
Sbjct: 479 ---------KHATSEMD--------KDVKYYESIQ------------VTMKYNLARLNEA 509

Query: 538 IHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALS 597
           +     A  LY+ IL ++ +Y+D YLRL  +A+ +  + ++ +   +AL +N   P+A S
Sbjct: 510 MSSYDVADKLYKEILKEHPNYIDCYLRLGCMARDKGLIFVASDFFKDALNINNDNPDARS 569

Query: 598 MLGDLELKNDDWVKAKETFRAA-SDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATH 656
           +LG+L L    +   ++ F     +     D+Y+ ++LGN++    L    R  + E  H
Sbjct: 570 LLGNLHLAKMQFALGQKNFETILKNPATSTDAYSLIALGNFS-LQTLHQPSRDKEKERKH 628

Query: 657 LEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDV 716
            EKA  ++ +V+     N++A NG G VLA KG    ++D+F QV+EA +        DV
Sbjct: 629 QEKALAIFKQVLRNDPRNIWATNGIGAVLAHKGCVIEARDIFAQVREATA-----DFCDV 683

Query: 717 WINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRA 776
           W+N+AHVY  Q  +  A++MY+NC++KFY + + +++ YLAR +  A +  + K  LL+A
Sbjct: 684 WLNIAHVYVEQKQYISAIQMYENCMKKFYKHNNVEVMQYLARAYLRANKLVEAKAVLLKA 743

Query: 777 IHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLH 836
             +AP +  L F+  V + + + + L+  + T + V   V ELE A + F +LS      
Sbjct: 744 RRVAPQDTVLLFNIAVVLSRLAMAILKDEKSTLEVVLQAVHELELAQKYFQYLS------ 797

Query: 837 LHGFDEKKINTHV-----EYCKHLLDAAKIHREAAER---EEQQNRQRQEAARQA---AL 885
           +HG D+ + N  V       C+ LL  A+ H   A R   EE+  R++QE  R+A    +
Sbjct: 798 VHG-DKNRFNIEVAGIEANTCQDLLSQAQYHVGRARRIDEEERSLRRKQEEEREAFKIKV 856

Query: 886 AEEARRKAEEQKKY---LLEKRK 905
           AE+ +R+ EE K     LL KR+
Sbjct: 857 AEQRKRREEEAKTSRDQLLAKRQ 879


>gi|390342223|ref|XP_799094.3| PREDICTED: RNA polymerase-associated protein CTR9 homolog isoform 2
           [Strongylocentrotus purpuratus]
          Length = 1120

 Score =  509 bits (1311), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 307/918 (33%), Positives = 512/918 (55%), Gaps = 62/918 (6%)

Query: 4   VYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQIL 63
           V IP+++++E + + L+QLP D  ++L ILK+E APL  WL +  EY+K+  V+ F +I 
Sbjct: 10  VEIPLRDTDEVIELDLEQLP-DGEEVLTILKSENAPLKTWLELGLEYYKKESVDDFVKIF 68

Query: 64  EEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRI 123
               +    +Y  + + +++  L+ L  YY    + E  +  K+E F  AT  Y  A RI
Sbjct: 69  ASWQADANLDYSGNEK-DQMTALDTLAAYYVQQARKEKNKDSKKELFTQATLLYTMADRI 127

Query: 124 DMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSL 182
            M++ +  +G+    L +G+ ++QA + F  VL    +N+PALLG+AC+ FN+  +  +L
Sbjct: 128 VMYDQNHLLGRACFCLLEGDKMDQADAQFNFVLNQAPNNIPALLGKACISFNKKDWRGAL 187

Query: 183 EFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDL 242
            +YK+AL+ +P+CP A+RLG+G C  +LG+  KAR AF+RALQLDP  V A+V LA+++ 
Sbjct: 188 AYYKKALRTNPNCPAAVRLGMGHCFVRLGKPDKARLAFERALQLDPRCVGAIVGLAILEA 247

Query: 243 QANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGP 302
                  I+KG++ + RA+ I     M LN+LANHFFF   +  V+ L   AL  T +  
Sbjct: 248 NGKAPDSIKKGVQLLSRAYTIDSGNPMVLNHLANHFFFKKDYTKVQHLALHALHGTENEA 307

Query: 303 TKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSAL 362
            ++ S Y LARS+H +GDY++A  YY  +         F+ P++GLGQ+ +   D  +A 
Sbjct: 308 IQAESCYQLARSFHVQGDYDQAFQYYYQATTYATP--NFVLPHFGLGQMYIHRRDTENAS 365

Query: 363 TNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKIDPRDAQAFIDLGEL 419
             FEKVL+  P N ET+K LG +Y      EK   A+  L+K  +  P D +A+I+L ++
Sbjct: 366 QCFEKVLKAQPGNYETMKILGSLYSNSKDEEKRDIAKGHLQKVVEQFPDDVEAWIELAQI 425

Query: 420 LISSDTGAALDAFKTARTLLK-KAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDG 478
           L  +D   AL A+ TA  +LK K   +VP E+LNN+G +H+  G  + A + ++ +L   
Sbjct: 426 LEITDVQTALSAYGTATRILKDKVQADVPPEILNNVGALHYRLGNVQEAKRYYEASL--- 482

Query: 479 IWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVL--FNLARLLE 536
                                            + +  H E+ +N ++V   FNLARL E
Sbjct: 483 ------------------------------EHSKREREHDEMYYNSISVTTSFNLARLHE 512

Query: 537 QIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNAL 596
             ++   A  LY+ IL ++ +YVD YLRL  +A+ R  +  + +   EAL++N  +P+A 
Sbjct: 513 AQYNMENAVKLYKEILKEHPNYVDCYLRLGCMARERGQIYEASDWFKEALQINQDHPDAW 572

Query: 597 SMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEAT 655
           S++G+L L   +W   ++ F R         D+Y+ L+LGN  +   L    R  + E  
Sbjct: 573 SLIGNLHLGKQEWGPGQKKFERILKQPATQNDTYSLLALGNV-WLQTLYQPTRDKEKEKR 631

Query: 656 HLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPD 715
           H E+A   Y +V+   + N+YAANG G +LA KG    ++D+F+QV+EA +      + D
Sbjct: 632 HQERALARYKQVLRSDSRNIYAANGIGCILAMKGYIREARDVFSQVREATA-----DVSD 686

Query: 716 VWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLR 775
           VW+NLAH+Y  Q  +  A++MY+NC++KF+   +  +L +LAR +++  + ++C+++LL+
Sbjct: 687 VWLNLAHIYVEQKQYISAIQMYENCIKKFFKFHNTTVLSFLARAYFKTGKLKECRQTLLK 746

Query: 776 AIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASNL 835
           A  ++P +  + ++  + +Q+ +   L+  +     V   V+EL+ A R F++LS + + 
Sbjct: 747 AKRVSPHDSLITYNLSLVLQRIAMYVLRDEKSNLKTVLGAVSELKTAQRYFTYLSKSGDR 806

Query: 836 HLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQN---RQRQEAARQAALAEE---- 888
               FD  +  T    C  LL  A+ H + A R+++++   RQ+QE  R+A   +     
Sbjct: 807 MR--FDLSQAGTEARQCADLLSQAQYHVQRARRQDEEDRALRQKQEEEREALKQKHLEIQ 864

Query: 889 -ARRKAEEQK-KYLLEKR 904
            A+++ EE + K L+EKR
Sbjct: 865 MAKKQVEEDRTKALIEKR 882


>gi|390342225|ref|XP_003725617.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog isoform 1
           [Strongylocentrotus purpuratus]
          Length = 1120

 Score =  509 bits (1310), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 307/918 (33%), Positives = 512/918 (55%), Gaps = 62/918 (6%)

Query: 4   VYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQIL 63
           V IP+++++E + + L+QLP D  ++L ILK+E APL  WL +  EY+K+  V+ F +I 
Sbjct: 10  VEIPLRDTDEVIELDLEQLP-DGEEVLTILKSENAPLKTWLELGLEYYKKESVDDFVKIF 68

Query: 64  EEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRI 123
               +    +Y  + + +++  L+ L  YY    + E  +  K+E F  AT  Y  A RI
Sbjct: 69  ASWQADANLDYSGNEK-DQMTALDTLAAYYVQQARKEKNKDSKKELFTQATLLYTMADRI 127

Query: 124 DMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSL 182
            M++ +  +G+    L +G+ ++QA + F  VL    +N+PALLG+AC+ FN+  +  +L
Sbjct: 128 VMYDQNHLLGRACFCLLEGDKMDQADAQFNFVLNQAPNNIPALLGKACISFNKKDWRGAL 187

Query: 183 EFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDL 242
            +YK+AL+ +P+CP A+RLG+G C  +LG+  KAR AF+RALQLDP  V A+V LA+++ 
Sbjct: 188 AYYKKALRTNPNCPAAVRLGMGHCFVRLGKPDKARLAFERALQLDPRCVGAIVGLAILEA 247

Query: 243 QANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGP 302
                  I+KG++ + RA+ I     M LN+LANHFFF   +  V+ L   AL  T +  
Sbjct: 248 NGKAPDSIKKGVQLLSRAYTIDSGNPMVLNHLANHFFFKKDYTKVQHLALHALHGTENEA 307

Query: 303 TKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSAL 362
            ++ S Y LARS+H +GDY++A  YY  +         F+ P++GLGQ+ +   D  +A 
Sbjct: 308 IQAESCYQLARSFHVQGDYDQAFQYYYQATTYATP--NFVLPHFGLGQMYIHRRDTENAS 365

Query: 363 TNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKIDPRDAQAFIDLGEL 419
             FEKVL+  P N ET+K LG +Y      EK   A+  L+K  +  P D +A+I+L ++
Sbjct: 366 QCFEKVLKAQPGNYETMKILGSLYSNSKDEEKRDIAKGHLQKVVEQFPDDVEAWIELAQI 425

Query: 420 LISSDTGAALDAFKTARTLLK-KAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDG 478
           L  +D   AL A+ TA  +LK K   +VP E+LNN+G +H+  G  + A + ++ +L   
Sbjct: 426 LEITDVQTALSAYGTATRILKDKVQADVPPEILNNVGALHYRLGNVQEAKRYYEASL--- 482

Query: 479 IWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVL--FNLARLLE 536
                                            + +  H E+ +N ++V   FNLARL E
Sbjct: 483 ------------------------------EHSKREREHDEMYYNSISVTTSFNLARLHE 512

Query: 537 QIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNAL 596
             ++   A  LY+ IL ++ +YVD YLRL  +A+ R  +  + +   EAL++N  +P+A 
Sbjct: 513 AQYNMENAVKLYKEILKEHPNYVDCYLRLGCMARERGQIYEASDWFKEALQINQDHPDAW 572

Query: 597 SMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEAT 655
           S++G+L L   +W   ++ F R         D+Y+ L+LGN  +   L    R  + E  
Sbjct: 573 SLIGNLHLGKQEWGPGQKKFERILKQPATQNDTYSLLALGNV-WLQTLYQPTRDKEKEKR 631

Query: 656 HLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPD 715
           H E+A   Y +V+   + N+YAANG G +LA KG    ++D+F+QV+EA +      + D
Sbjct: 632 HQERALARYKQVLRSDSRNIYAANGIGCILAMKGYIREARDVFSQVREATA-----DVSD 686

Query: 716 VWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLR 775
           VW+NLAH+Y  Q  +  A++MY+NC++KF+   +  +L +LAR +++  + ++C+++LL+
Sbjct: 687 VWLNLAHIYVEQKQYISAIQMYENCIKKFFKFHNTTVLSFLARAYFKTGKLKECRQTLLK 746

Query: 776 AIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASNL 835
           A  ++P +  + ++  + +Q+ +   L+  +     V   V+EL+ A R F++LS + + 
Sbjct: 747 AKRVSPHDSLITYNLSLVLQRIAMYVLRDEKSNLKTVLGAVSELKTAQRYFTYLSKSGDR 806

Query: 836 HLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQN---RQRQEAARQAALAEE---- 888
               FD  +  T    C  LL  A+ H + A R+++++   RQ+QE  R+A   +     
Sbjct: 807 MR--FDLSQAGTEARQCADLLSQAQYHVQRARRQDEEDRALRQKQEEEREALKQKHLEIQ 864

Query: 889 -ARRKAEEQK-KYLLEKR 904
            A+++ EE + K L+EKR
Sbjct: 865 MAKKQVEEDRTKALIEKR 882


>gi|330840509|ref|XP_003292257.1| hypothetical protein DICPUDRAFT_50293 [Dictyostelium purpureum]
 gi|325077520|gb|EGC31227.1| hypothetical protein DICPUDRAFT_50293, partial [Dictyostelium
           purpureum]
          Length = 981

 Score =  509 bits (1310), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 323/948 (34%), Positives = 534/948 (56%), Gaps = 93/948 (9%)

Query: 4   VYIPVQN-SEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQI 62
           +YIP++  S++ VR+  + LP   S+++ +L +E APLD+WL +A EY+KQ ++ +F++I
Sbjct: 8   IYIPIRGVSDQAVRIDCNSLP-SPSELIGVLTSEIAPLDIWLKLATEYYKQDRINEFKEI 66

Query: 63  LEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASR 122
           L    +PEI+ YY++ +++RIA+LNAL  YYT +G  E  + +++E+F  AT ++ KA +
Sbjct: 67  LSVVLTPEIERYYSNDKFDRIAMLNALASYYTQMGSQEKDKSQRDEYFHQATFHFTKADK 126

Query: 123 IDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLE-ADRDN----VPALLGQACVEFNRGR 177
           ID H+P TW+GK  LLL KG+VE+A + FK VL+ A+++     +PALLG AC+ FN+G 
Sbjct: 127 IDPHQPLTWIGKAVLLLCKGDVERADTNFKQVLDLANKEPALPVLPALLGSACILFNKGN 186

Query: 178 YSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVAL 237
           Y  +L+ Y++ +Q + +C  A+RLG+G C +KLG+  KA++AF+R L+LD +NVEA++ L
Sbjct: 187 YIKALDTYQKVIQQNSNCLPAVRLGLGYCYFKLGRNNKAKEAFKRVLELDRDNVEAMIGL 246

Query: 238 AVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAV 297
           +++ +  N+   I + M  +  A+++ P   + LN+LANH+F+ G+   V  L   AL  
Sbjct: 247 SLVLMNDNQ---IDEAMNLILEAYQLAPTNPIVLNHLANHYFYRGEFQKVHTLGIAALNN 303

Query: 298 TNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGD 357
           T+    K+ S Y + ++ H+   + +A  +Y  +V  +  P +F    +GLGQ+ +   D
Sbjct: 304 TDVSHIKAESSYLVGKALHATQRWSEALQFYHQAV--LKNP-DFYLAQFGLGQIYIHNED 360

Query: 358 FRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK-------AQELLRKAAKIDPRDA 410
           F  A++ FE VL   P+N ETL+ LG +Y + G + K       A  +L+KA +I+P D 
Sbjct: 361 FDKAISCFENVLAKQPNNYETLQILGSLY-KHGSLYKNSMNTATAANVLKKAIEINPNDY 419

Query: 411 QAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQS 470
             + +L ++L  S+ GAAL+A++    LLK       +E+LNNI V+  +KG    A Q+
Sbjct: 420 NNWFELAQILEISEVGAALEAYEKGLALLKNENITPSLEILNNIAVLRHQKGLNSEAEQT 479

Query: 471 FKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFN 530
           + D +           K   Y +D      QFK +                   VT  +N
Sbjct: 480 YLDTI-----------KQSGYELD------QFKAVN------------------VTTTYN 504

Query: 531 LARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNG 590
           LARL E +     A  LYR I+ ++ +Y D YLRL+ I K + +   + E + E L +  
Sbjct: 505 LARLYESMGQMNRAEELYRGIIKEHPNYYDCYLRLSQIFKNQGDTFEANEWIKEVLHIQP 564

Query: 591 KYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKD-SYATLSLGNWNYFAALRNEKRA 649
               A ++ G+L L  ++W  A++ F    + ++ K+ +YATLSLGN  Y A   N  + 
Sbjct: 565 NSQEAWALYGNLHLSKEEWYNAQKKFEQILENSENKNETYATLSLGNLYYNAKFSNPDKV 624

Query: 650 PKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSV 709
            K    +L  A+  Y RV+ ++ +N+YAANG G++ AEKG  +++ D+F Q++EAA   +
Sbjct: 625 EK----YLGNAESFYQRVLGKNPTNIYAANGIGMITAEKGNLNLASDIFLQIREAAIDCI 680

Query: 710 FVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQI---LLYLARTHYEAEQW 766
            V +     NLAHVY A+G    A+K+Y+ CL+K   N+  +I   + YL++ ++EA ++
Sbjct: 681 PVSL-----NLAHVYMARGLIDNAIKLYEGCLKK--SNSPKEIETTMHYLSKAYFEANRF 733

Query: 767 QDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVF 826
            DCK++L +AIHL P +  + F+  + ++ F+   L K ++ A E    + ELE A ++ 
Sbjct: 734 YDCKQTLKKAIHLYPYDPVIHFNLAICIESFTNVFLGKHQKNAGETLVVLKELEFAQKLI 793

Query: 827 SHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEAA-----R 881
           S+L+         F+  K   H+     LL    I  E+  + EQ+  +++E A     R
Sbjct: 794 SNLATVKPNPKLKFNLNKAKVHLGSIDKLLARVVIEYESLLKAEQELSKKRELAFEEVKR 853

Query: 882 QA---------------ALAEEARRKAEE--QKKYLLEKRKLEDEQKR 912
           Q                A AE  R+ AEE  ++   +EK   E E+KR
Sbjct: 854 QEEEKRRKEMEIQAELEARAESERKLAEELAEQTREIEKTLAESERKR 901


>gi|91093513|ref|XP_969441.1| PREDICTED: similar to tpr repeat nuclear phosphoprotein [Tribolium
           castaneum]
 gi|270002675|gb|EEZ99122.1| hypothetical protein TcasGA2_TC005228 [Tribolium castaneum]
          Length = 1187

 Score =  509 bits (1310), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 317/938 (33%), Positives = 521/938 (55%), Gaps = 58/938 (6%)

Query: 2   ACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQ 61
             + IP+++++E + +  DQLP D  ++L IL+ E   L +W+ +A EY+KQGK+E F +
Sbjct: 3   TTIEIPLRDTDEVIELDSDQLP-DGDEVLGILRQENTQLFIWVNLALEYYKQGKIEDFIK 61

Query: 62  ILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKAS 121
           ILE  S  + +  Y D   +++  L+ L  YY      E  + +K E F  AT  Y  A 
Sbjct: 62  ILE-ASRTDANVDYRDYEKDQMRALDMLAAYYVQEANREKNKDKKRELFTKATLLYTTAD 120

Query: 122 RIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSD 180
           +I M++ +  +G+    L +G+ +EQA + F  VL    +N+P+LLG+AC+ +N+  +  
Sbjct: 121 KIIMYDQNHLLGRAYFCLLEGDKMEQADAQFNFVLNQSPNNIPSLLGKACIAYNKKDFRG 180

Query: 181 SLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVM 240
           +L FYK+AL+ +P+CP A+RLG+G C  KL    KAR AF+RALQLDP+ V ALV LA++
Sbjct: 181 ALAFYKKALRTNPNCPAAVRLGMGHCFMKLNNQEKARLAFERALQLDPQCVGALVGLAIL 240

Query: 241 DLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 300
            L   +   IR G++ + +A+ I     M LN+LANHFFF   +  V+ L   A   T +
Sbjct: 241 KLNLQQPESIRSGVQMLSKAYTIDSSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNTEN 300

Query: 301 GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRS 360
              ++ S Y LAR++H +GDY++A  YY  + +    P  F+ P++GLGQ+ +  GD  +
Sbjct: 301 EAMRAESCYQLARAFHVQGDYDQAFQYYYQATQFA--PTAFVLPHFGLGQMYIYRGDAEN 358

Query: 361 ALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKIDPRDAQAFIDLG 417
           A   FEKVL+  P N ET+K LG +Y       K   A+  L+K  +  P D +A+I+L 
Sbjct: 359 AAQCFEKVLKAQPGNYETMKILGSLYANSSSQSKRDIAKNHLKKVTEQFPDDIEAWIELA 418

Query: 418 ELLISSDTGAALDAFKTARTLLKKAGE-EVPIEVLNNIGVIHFEKGEFESAHQSFKDALG 476
           ++L  SD   +L+A+ TA  +L K  + ++P E+LNN+G +H+     E A ++ ++AL 
Sbjct: 419 QILEQSDLQGSLNAYGTAIQILNKDVQADIPTEILNNVGALHYRLNNLEEAKKNLEEAL- 477

Query: 477 DGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLE 536
                    ++ KT             D Q ++               VT+ +NLARL E
Sbjct: 478 ---------TRAKTEAE---------HDPQYYNSIS------------VTITYNLARLNE 507

Query: 537 QIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNAL 596
            +     +  LY+ IL +  +YVD YLRL  +A+ + ++  + +   EAL+ N ++P+A 
Sbjct: 508 ALCLFDKSEKLYKDILKERPNYVDCYLRLGCMARDKGHIYEASDWFKEALRFNTEHPDAW 567

Query: 597 SMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEAT 655
           S+LG+L L   +W   ++ + R   +    +DSY+ + LGN  +   L    +  + E  
Sbjct: 568 SLLGNLHLAKAEWGPGQKKYERILKNPATSQDSYSLIVLGNV-WLQTLHQPTKDKEREKR 626

Query: 656 HLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPD 715
           H E+A  ++ +V+     N++AANG G VLA KG  + ++D+F QV+EA +        D
Sbjct: 627 HQERALSMFKQVLKIDPKNIWAANGIGAVLAHKGAVNEARDIFAQVREATA-----DFCD 681

Query: 716 VWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLR 775
           VW+N+AHVY  Q  F  A++MY+NCLRKF+   + ++L YLAR +Y+A + ++ K  LL+
Sbjct: 682 VWLNIAHVYVEQKQFVSAIQMYENCLRKFFKYNNVEVLQYLARAYYKASKLKEAKMVLLK 741

Query: 776 AIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASNL 835
           A  +AP +  L ++  + +Q+ +   L+  + T   V   V EL  +++ F++L+   + 
Sbjct: 742 ARRVAPHDTVLLYNIALVLQRLATHILKDEKSTLQTVLQAVHELGLSLKYFTYLAEFGDK 801

Query: 836 HLHGFDEKKINTHVEYCKHLLDAAKIHREAAER---EEQQNRQRQEAARQAALAEEARRK 892
               +D          CK LL  A+ H   A R   EE+Q R++QE  R A       R+
Sbjct: 802 MR--YDVTLAAMEARQCKDLLSQAQYHVARARRVDEEERQLRRKQEDERTAF----KMRQ 855

Query: 893 AEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVKARIFYI 930
            EEQKK + E+ +L  EQ  L++++E+ ++ K  + ++
Sbjct: 856 LEEQKK-VEEEMRLTKEQ-LLQKRQEYKEKTKNALLFM 891


>gi|431919638|gb|ELK18026.1| RNA polymerase-associated protein CTR9 like protein [Pteropus
           alecto]
          Length = 1161

 Score =  508 bits (1308), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 327/922 (35%), Positives = 507/922 (54%), Gaps = 78/922 (8%)

Query: 2   ACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQ 61
             + IP+++++E + +  DQLP +  +++ ILK E   L +W+ +A EY+KQGK E+F +
Sbjct: 4   GSIEIPLRDTDEVIELDFDQLP-EGDEVISILKQEHTQLHIWIALALEYYKQGKTEEFVK 62

Query: 62  ILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNK 119
           +LE   +  ID    Y D   +++  L+ L  YY    + E  +  K++    AT  Y  
Sbjct: 63  LLE---AARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNKKDLITQATLLYTM 119

Query: 120 ASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRY 178
           A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+PALLG+AC+ FN+  Y
Sbjct: 120 ADKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPALLGKACISFNKKDY 179

Query: 179 SDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA 238
             +L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF RAL+L+ + V ALV LA
Sbjct: 180 RGALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALELNSKCVGALVGLA 239

Query: 239 VMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVT 298
           V++L   EA  I+ G++ + RA+ I P   M LN+LANHFFF   +  V+ L   A   T
Sbjct: 240 VLELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNT 299

Query: 299 NHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDF 358
                ++ S Y LARS+H + DY++A  YY  + +  +    F+ P++GLGQ+ +  GD 
Sbjct: 300 EVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASS--SFVLPFFGLGQMYIYRGDK 357

Query: 359 RSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKIDPRDAQAFID 415
            +A   FEKVL+ YP+N ET+K LG +Y      EK   A+  L+K  +  P D +A+I+
Sbjct: 358 ENASQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKVTEQYPDDVEAWIE 417

Query: 416 LGELLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDA 474
           L ++L  +D   AL A+ TA R L +K   +VP E+LNN+G +HF  G    A + F   
Sbjct: 418 LAQILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYF--- 474

Query: 475 LGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWN--KVTVLFNLA 532
                 L  LD                        R + +  H E  +N   VT  +NLA
Sbjct: 475 ------LASLD------------------------RAKAEAEHDEHYYNAISVTTSYNLA 504

Query: 533 RLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKY 592
           RL E + +   A  LY+ IL ++ +YVD YLRL A+A+ + N   + +   EAL++N  +
Sbjct: 505 RLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEASDWFKEALQINQDH 564

Query: 593 PNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYFAALRNEKRAPK 651
           P+A S++G+L L   +W   ++ F R     +   D+Y+ L+LGN  +   L    R  +
Sbjct: 565 PDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQSDTYSMLALGNV-WLQTLHQPTRDRE 623

Query: 652 LEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFV 711
            E  H ++A  +Y +V+     NLYAANG G VLA KG F  ++D+F QV+EA +     
Sbjct: 624 KEKRHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHKGYFREARDVFAQVREATA----- 678

Query: 712 QMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKK 771
            + DVW+NLAH+Y  Q  +  A++MY+NCLRKFY + + +++LYLAR  ++      C K
Sbjct: 679 DISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVVLYLARALFK------CGK 732

Query: 772 SLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSA 831
                 H+APS+  L F+  + +Q+ + S L+  +    EV + V ELE A R FS+LS 
Sbjct: 733 ------HVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVLNAVKELELAHRYFSYLSK 786

Query: 832 ASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNR-------QRQEAARQAA 884
             +     FD     T    C  LL  A+ H   A +++++ R       Q +E  RQ  
Sbjct: 787 VGDKMR--FDLALAATEARQCSDLLSQAQYHVARARKQDEEERELRAKQEQEKELLRQKL 844

Query: 885 LAEE--ARRKAEEQKKYLLEKR 904
           L E+   R + +E++K LLE+R
Sbjct: 845 LKEQEEKRLREKEEQKKLLEQR 866


>gi|194864807|ref|XP_001971117.1| GG14779 [Drosophila erecta]
 gi|190652900|gb|EDV50143.1| GG14779 [Drosophila erecta]
          Length = 1150

 Score =  508 bits (1307), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 317/923 (34%), Positives = 507/923 (54%), Gaps = 67/923 (7%)

Query: 3   CVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQI 62
           C+ IP+Q+++E + V  DQLP D  ++L ILK E+APL +W+ +A  Y+KQ K E F  +
Sbjct: 4   CIEIPLQDTDEVIEVDPDQLP-DCPEVLSILKQERAPLHVWVNVALAYYKQKKTEDFVLL 62

Query: 63  LEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASR 122
           LEE  S +  + Y D   + +  L+ L  +Y      E  + +K E F+ AT  Y  A +
Sbjct: 63  LEESRSDDATKEYRDSDKDLMRALDMLAAHYVQEAYREKSKDKKRELFMKATNLYTSADK 122

Query: 123 IDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDS 181
           I M++ S  +G+    L +G+ ++QA + F  VL     N+P+LLG+AC+ FNR  Y  +
Sbjct: 123 IIMYDQSHLLGRAYFCLLEGDKMDQADAQFNFVLNQSPSNIPSLLGKACIAFNRKDYRGA 182

Query: 182 LEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMD 241
           + FYK+AL+ +P+CP  +R+G+  C  K+G   KA+ AF+RALQLD + V AL+ LAV+ 
Sbjct: 183 MAFYKKALRTNPNCPANVRIGMAHCFLKMGNPEKAKLAFERALQLDQQCVGALIGLAVLK 242

Query: 242 LQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG 301
           L   E    + G++ + +A+ I     M LN+LANHFFF   +  V  L   A   T + 
Sbjct: 243 LNQLEPESNKLGVQMLSKAYTIDNANPMVLNHLANHFFFKKDYQKVHHLALHAFHNTENE 302

Query: 302 PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSA 361
             ++ S Y LARS+H++ DY++A  YY  S +    P  F+ P+YGLGQ+ +  GD  +A
Sbjct: 303 AMRAESCYQLARSFHAQSDYDQAFQYYYQSTQIA--PANFVLPHYGLGQMYIYRGDTENA 360

Query: 362 LTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKIDPRDAQAFIDLGE 418
              FEKVL+I P N ET+K LG +Y       K   A+  L+K  +  P D +A+I+L +
Sbjct: 361 AQCFEKVLKIQPGNYETMKILGSLYAHSNSQTKRDMAKTHLKKVTEQFPEDIEAWIELAQ 420

Query: 419 LLISSDTGAALDAFKTARTLLK-KAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGD 477
           +L  +D  A+L+A+ TA ++L+ KA  E+P E+ NN+  +H+  G  + A  + + AL  
Sbjct: 421 ILEQNDLQASLNAYGTASSILRDKAKYEIPAEIQNNVASLHYRLGNLKMAKDTLESAL-- 478

Query: 478 GIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQ 537
                    K  T  +D        KD++ +   +            VT+ +NLARL E 
Sbjct: 479 ---------KHATSEMD--------KDVKYYESIQ------------VTMKYNLARLNEA 509

Query: 538 IHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALS 597
           +     A  LY+ IL ++ +Y+D YLRL  +A+ +  + ++ +   +AL +N   P+A S
Sbjct: 510 MSSYDVADKLYKEILKEHPNYIDCYLRLGCMARDKGLIFVASDFFKDALNINNDNPDARS 569

Query: 598 MLGDLELKNDDWVKAKETFRAA-SDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATH 656
           +LG+L L    +   ++ F     +     D+Y+ ++LGN++    L    R  + E  H
Sbjct: 570 LLGNLHLAKMQFALGQKNFETILKNPATSTDAYSLIALGNFS-LQTLHQPSRDKEKERKH 628

Query: 657 LEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDV 716
            EKA  ++ +V+     N++A NG G VLA KG    ++D+F QV+EA +        DV
Sbjct: 629 QEKALAIFKQVLRNDPRNIWATNGIGAVLAHKGCVIEARDIFAQVREATA-----DFCDV 683

Query: 717 WINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRA 776
           W+N+AHVY  Q  +  A++MY+NC++KFY + + +++ YLAR +  A +  + K  LL+A
Sbjct: 684 WLNIAHVYVEQKQYISAIQMYENCMKKFYKHNNVEVMQYLARAYLRANKLVEAKAVLLKA 743

Query: 777 IHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLH 836
             +AP +  L F+  V + + + + L+  + T + V   V ELE A + F +LS      
Sbjct: 744 RRVAPQDTVLLFNIAVVLSRLAMAILKDEKSTLEIVLQAVHELELAQKYFQYLS------ 797

Query: 837 LHGFDEKKINTHV-----EYCKHLLDAAKIHREAAER---EEQQNRQRQEAARQA---AL 885
           +HG D+ + N  V       C+ LL  A+ H   A R   EE+  R++QE  R+A    +
Sbjct: 798 VHG-DKNRFNIEVAGIEANTCQDLLSQAQYHVGRARRIDEEERSLRRKQEEEREAFKVKV 856

Query: 886 AEEARRKAEEQKKY---LLEKRK 905
           AE+ +R+ EE K     LL KR+
Sbjct: 857 AEQRKRREEEAKTSRDQLLAKRQ 879


>gi|66816601|ref|XP_642310.1| RNA polymerase II complex component [Dictyostelium discoideum AX4]
 gi|60470113|gb|EAL68093.1| RNA polymerase II complex component [Dictyostelium discoideum AX4]
          Length = 1106

 Score =  507 bits (1305), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 308/953 (32%), Positives = 533/953 (55%), Gaps = 99/953 (10%)

Query: 4   VYIPVQN-SEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQI 62
           +YIP++  +++ +++ +  LP D+ +++++LKAE APLDLWL +A EY+KQ ++  F ++
Sbjct: 10  IYIPIRGFNDQALKIDISSLP-DSKELIEVLKAELAPLDLWLKLANEYYKQDRITDFIEV 68

Query: 63  LEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASR 122
           L++ +  ++++YY D + +RIA+LNAL  YYT LG  E  +  +EE+F  AT ++ KA R
Sbjct: 69  LKQVTDADLEQYYKDSKLDRIAMLNALASYYTQLGSQEKDKSRREEYFSNATFHFTKADR 128

Query: 123 IDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDN-----VPALLGQACVEFNRGR 177
           ID H+P TW+GK  LLL KG+ E+A S FK VL+  + N     +PA LG AC+ FN+G 
Sbjct: 129 IDPHQPLTWIGKAVLLLTKGDYERAESNFKQVLDLAKSNNTLPVLPAKLGSACILFNQGN 188

Query: 178 YSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVAL 237
           Y  +L+ Y++ +Q + +C  ++RLG+G C +KLG+  KA++AF+R L+LD +NVEA++ L
Sbjct: 189 YIKALDTYQKVIQQNSNCLPSVRLGLGYCYFKLGRTKKAKEAFKRVLELDRDNVEAMIGL 248

Query: 238 AVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAV 297
           A++ +  N+   I + M+ +  A+++ P  ++ LN+LANH+FF G++  V  L   A   
Sbjct: 249 ALVLMNENQ---IPEAMKLILSAYQLAPTNSIVLNHLANHYFFRGEYNKVNTLGVAAFNN 305

Query: 298 TNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGD 357
           T+    K+ S Y + R++H+   ++ A  YY  +V+   K  +     +GLGQ+ +   D
Sbjct: 306 TDVAHIKAESAYLIGRAFHATQRWQDAIQYYHQAVQ---KNPDLYLAQFGLGQIHIHNED 362

Query: 358 FRSALTNFEKVLEIYPDNCETLKALGHIY------------------------------- 386
           +  A+  FE+VL   P+N ETL+ LG +Y                               
Sbjct: 363 YDKAILCFEQVLSKQPNNYETLQILGSLYKHGSLYKSNVKSTTTTTSTTTTTNNNININN 422

Query: 387 ---VQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAG 443
              +    I K + +L+KA +++P D+  + +LG++L S++   AL+A++    LLKK G
Sbjct: 423 NNNLSNEIINKIKNVLKKATELNPNDSSNWFELGQVLESTEVSTALEAYEKGLNLLKKDG 482

Query: 444 EEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASML-QF 502
               +E+ NNI V+  +KG    A Q++ D                  +I  S   L QF
Sbjct: 483 IVPSLEIQNNIAVLRHQKGLLVEAEQTYLD------------------IIKQSGYQLNQF 524

Query: 503 KDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAY 562
           K +                   +T  +NLARL E +     A  LY+ I+ ++ +Y D Y
Sbjct: 525 KSIN------------------ITSTYNLARLYETMGQVNKAEELYKGIIKEHPNYYDCY 566

Query: 563 LRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDA 622
           LRL+ I K + +   + E + E L +      A ++ G+L L  ++W  A++ F   ++ 
Sbjct: 567 LRLSCICKQQGDYYEAGEWIREVLDIQPDNQEAWALYGNLHLYKEEWYPAQKNFEQITEN 626

Query: 623 TDGKD-SYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGA 681
            D K+ +YA+LSLGN  Y A   N  +  K    ++  A++ Y RV+ ++ +N+YAANG 
Sbjct: 627 PDNKNETYASLSLGNIYYNAKFSNPDKVEK----YILNAEQFYNRVLTKNPTNIYAANGI 682

Query: 682 GVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCL 741
           G+++AEKG  +++ + F Q++EA+   + V      +NLAH+Y ++G F  A+K+Y+ CL
Sbjct: 683 GMIIAEKGNLNLAGETFLQIREASMDCIPVS-----VNLAHIYVSKGLFDNAIKLYEGCL 737

Query: 742 RKFYYNTDAQ-ILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSAS 800
           +K     + + I++YLA+ +++A ++ D K++L +AIH+ P N ++ F+  ++++  +  
Sbjct: 738 KKSTSPKEIETIIMYLAKVYFDANRFYDSKQTLKKAIHMYPHNLSIHFNLAISIEMQATI 797

Query: 801 TLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAK 860
            L+K ++ A E  + + ELE A R+ + L+   +     F   K  TH    + +L + +
Sbjct: 798 FLEKHQKNATETFNIIKELEFAQRLLTPLANTKSTPKLNFSPSKAKTHQTSIEKILVSLR 857

Query: 861 IHREAAEREEQQNRQRQEAARQAA--LAEEARRKAEEQKKYLLEKRKLEDEQK 911
              E+  + E    +++EAA +    L EE R +  E K+ L E  KLE E+K
Sbjct: 858 TEHESIVKIEADLSKKREAAFEEVKRLEEEKRIRDLELKQQLEE--KLEAERK 908


>gi|195441399|ref|XP_002068497.1| GK20387 [Drosophila willistoni]
 gi|194164582|gb|EDW79483.1| GK20387 [Drosophila willistoni]
          Length = 1185

 Score =  505 bits (1300), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 314/923 (34%), Positives = 508/923 (55%), Gaps = 67/923 (7%)

Query: 3   CVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQI 62
           C+ IP+Q+++E + V  DQLP D+ ++L ILK E+APL +W+ +A  Y+KQ K E F  +
Sbjct: 4   CIEIPLQDTDEVIEVDPDQLP-DSQEVLSILKQERAPLHVWVNVALAYYKQKKTEDFVTL 62

Query: 63  LEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASR 122
           LEE       + Y D   + +  L+ L  +Y      E  + +K E F+ AT  Y  A +
Sbjct: 63  LEESRGTCATKDYRDSDKDSMRALDMLAAHYVQEAYREKSKDKKRELFMKATNLYTSADK 122

Query: 123 IDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDS 181
           I M++ S  +G+    L +G+ ++QA + F  VL     N+P+LLG+AC+ FNR  Y  +
Sbjct: 123 IIMYDQSHLLGRAYFCLLEGDKMDQADAQFNFVLNQSPSNIPSLLGKACIAFNRKDYRGA 182

Query: 182 LEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMD 241
           + FYK+AL+ +P+CP  +R+G+  C  K+G   KA+ AF+RALQLD + V AL+ LAV+ 
Sbjct: 183 MAFYKKALRTNPNCPANVRIGMAHCFLKMGNPVKAKLAFERALQLDQQCVGALIGLAVLK 242

Query: 242 LQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG 301
           L   E    + G++ + +A+ I     M LN+LANHFFF   +  V  L   A   T + 
Sbjct: 243 LNQLEPESNKLGVQMLSKAYTIDNANPMVLNHLANHFFFKKDYQKVHHLALHAFHNTENE 302

Query: 302 PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSA 361
             ++ S Y LARS+H++ DY++A  YY  S +    P  F+ P+YGLGQ+ +  GD  +A
Sbjct: 303 AMRAESCYQLARSFHAQSDYDQAFQYYYQSTQIA--PANFVLPHYGLGQMYIYRGDTENA 360

Query: 362 LTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKIDPRDAQAFIDLGE 418
              FEKVL+I P N ET+K LG +Y       K   A+  L+K  +  P D +A+I+L +
Sbjct: 361 AQCFEKVLKIQPGNYETMKILGSLYAHSNSQTKRDMAKTHLKKVTEQFPEDIEAWIELAQ 420

Query: 419 LLISSDTGAALDAFKTARTLLK-KAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGD 477
           +L  +D  A+L+A+ TA ++L+ KA  E+P E+ NN+  +H+  G  + A  + + AL  
Sbjct: 421 ILEQNDLQASLNAYGTASSILRDKAKYEIPAEIQNNVASLHYRLGNLKMAKDTLESALQH 480

Query: 478 GIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQ 537
                       T  +D        KD++ +   +            VT+ +NLARL E 
Sbjct: 481 A-----------TSEMD--------KDVKYYESIQ------------VTMKYNLARLNEA 509

Query: 538 IHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALS 597
           +     A  LY+ IL ++ +Y+D YLRL  +A+ +  + ++ +   +AL +N   P+A S
Sbjct: 510 MSSYDVADKLYKEILKEHPNYIDCYLRLGCMARDKGLIFVASDFFKDALNINNDNPDARS 569

Query: 598 MLGDLELKNDDWVKAKETFRAA-SDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATH 656
           +LG+L L    +   ++ F     + +   D+Y+ ++LGN++    L    R  + E  H
Sbjct: 570 LLGNLHLAKMQFALGQKNFETILKNPSTSTDAYSLIALGNFS-LQTLHQPSRDKEKERKH 628

Query: 657 LEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDV 716
            EKA  ++ +V+     N++AANG G VLA KG    ++D+F QV+EA +     +  DV
Sbjct: 629 QEKALAIFKQVLRNDCRNIWAANGIGAVLAHKGCVIEARDIFAQVREATA-----EFCDV 683

Query: 717 WINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRA 776
           W+N+AH+Y  Q  +  A++MY+NC++KF+ + + +++ YLAR +  A +  + K  LL+A
Sbjct: 684 WLNIAHIYVEQKQYISAIQMYENCMKKFFKHNNVEVMQYLARAYLRANKLVEAKAVLLKA 743

Query: 777 IHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLH 836
             +AP +  L F+  V + + + + L+  + T + V   V ELE A + F +LS      
Sbjct: 744 RRVAPQDTVLLFNIAVVLSRLAMAILKDEKSTLEIVLQAVNELELAHKYFQYLS------ 797

Query: 837 LHGFDEKKINTHV-----EYCKHLLDAAKIHREAAER---EEQQNRQRQEAARQA---AL 885
           +HG D+ + N  V       C+ LL  A+ H   A R   EE+  R++QE  R+A    +
Sbjct: 798 VHG-DKTRFNIEVAGIEANTCQDLLSQAQYHVGRARRIDEEERSLRRKQEEEREAFKLKV 856

Query: 886 AEEARRKAEEQKKY---LLEKRK 905
           AE+ +R+ EE K     LL KR+
Sbjct: 857 AEQRKRREEEAKTSRDQLLAKRQ 879


>gi|195170683|ref|XP_002026141.1| GL16176 [Drosophila persimilis]
 gi|194111021|gb|EDW33064.1| GL16176 [Drosophila persimilis]
          Length = 1180

 Score =  505 bits (1300), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 314/923 (34%), Positives = 505/923 (54%), Gaps = 67/923 (7%)

Query: 3   CVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQI 62
           C+ IP+Q+++E + V  DQLP D  ++L ILK E+APL +W+ ++  Y+KQ K + F  +
Sbjct: 4   CIEIPLQDTDEVIEVDPDQLP-DCLEVLSILKQERAPLHVWVNVSLAYYKQKKTDDFVTL 62

Query: 63  LEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASR 122
           LE+   PE ++ Y D   + +  L+ L  +Y      E  + +K E F+ AT  Y  A +
Sbjct: 63  LEDSRGPEANKEYRDSDKDLMRALDMLAAHYVQEAYREKSKDKKRELFMKATNLYTNADK 122

Query: 123 IDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDS 181
           I M++ S  +G+    L +G+ ++QA + F  VL     N+P+LLG+AC+ FNR  Y  +
Sbjct: 123 IIMYDQSHLLGRAYFCLLEGDKMDQADAQFNFVLNQSPSNIPSLLGKACIAFNRKDYRGA 182

Query: 182 LEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMD 241
           + FYK+AL+ +P+CP  +R+G+  C  K+G   KA+ AF+RALQLD + V AL+ LAV+ 
Sbjct: 183 MAFYKKALRTNPNCPANVRIGMAHCFLKMGNPEKAKLAFERALQLDQQCVGALIGLAVLK 242

Query: 242 LQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG 301
           L   E    + G++ + +A+ I     M LN+LANHFFF   +  V  L   A   T + 
Sbjct: 243 LNQLEPESNKLGVQMLSKAYTIDNANPMVLNHLANHFFFKKDYQKVHHLALHAFHNTENE 302

Query: 302 PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSA 361
             ++ S Y LARS+H++ DY++A  YY  S +    P  F+ P+YGLGQ+ +  GD  +A
Sbjct: 303 AMRAESCYQLARSFHAQSDYDQAFQYYYQSTQIA--PANFVLPHYGLGQMYIYRGDTENA 360

Query: 362 LTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKIDPRDAQAFIDLGE 418
              FEKVL+I P N ET+K LG +Y       K   A+  L+K  +  P D +A+I+L +
Sbjct: 361 AQCFEKVLKIQPGNYETMKILGSLYAHSNSQSKRDMAKTHLKKVTEQFPDDIEAWIELAQ 420

Query: 419 LLISSDTGAALDAFKTARTLLK-KAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGD 477
           +L  +D  A+L A+ TA  +LK KA  E+P E+ NN+  +H+  G+   A    + AL  
Sbjct: 421 ILEQNDLAASLAAYGTASKILKDKAKYEIPAEIQNNVSSLHYRLGDLIEAKVKLESALQH 480

Query: 478 GIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQ 537
            I  + +D                 KD++ +   +            VT+ +NLARL E 
Sbjct: 481 AI--SEMD-----------------KDVKYYESIQ------------VTMKYNLARLNEA 509

Query: 538 IHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALS 597
           +     A  LY+ IL ++ +Y+D YLRL  +A+ +  + ++ +   +AL +N   P+A S
Sbjct: 510 MSSYDVADKLYKEILKEHPNYIDCYLRLGCMARDKGLIFVASDFFKDALNINNDNPDARS 569

Query: 598 MLGDLELKNDDWVKAKETFRAA-SDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATH 656
           +LG+L L    +   ++ F     +     D+Y+ ++LGN++    L    R  + E  H
Sbjct: 570 LLGNLHLAKMQFALGQKNFETILKNPATSTDAYSLIALGNFS-LQTLHQPSRDKEKERKH 628

Query: 657 LEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDV 716
            EKA  ++ +V+     N++A NG G VLA KG    ++D+F QV+EA +        DV
Sbjct: 629 QEKALAIFKQVLRNDPRNIWATNGIGAVLAHKGCVIEARDIFAQVREATA-----DFSDV 683

Query: 717 WINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRA 776
           W+N+AHVY  Q  +  A++MY+NC++KFY + + +++ YLAR +  A +  + K  LL+A
Sbjct: 684 WLNIAHVYVEQKQYISAIQMYENCMKKFYKHNNVEVMQYLARAYLRANKLVEAKAVLLKA 743

Query: 777 IHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLH 836
             +AP +  L F+  V + + + + L+  + T + V   V ELE A + F +LS      
Sbjct: 744 RRVAPQDTVLLFNIAVVLSRLAMAILKDEKSTLEVVLQAVHELELAHKYFQYLS------ 797

Query: 837 LHGFDEKKINTHV-----EYCKHLLDAAKIHREAAER---EEQQNRQRQEAARQA---AL 885
           +HG D+ + N  V       C+ LL  A+ H   A R   EE+  R++QE  R+A    +
Sbjct: 798 VHG-DKNRFNIEVAGVEANTCQDLLSQAQYHVGRARRIDEEERSLRRKQEEEREAFKLKV 856

Query: 886 AEEARRKAEE---QKKYLLEKRK 905
           AE+ +R+ EE    +  LL KR+
Sbjct: 857 AEQRKRREEEAQTSRDQLLAKRQ 879


>gi|198462498|ref|XP_001352454.2| GA15373 [Drosophila pseudoobscura pseudoobscura]
 gi|198150850|gb|EAL29950.2| GA15373 [Drosophila pseudoobscura pseudoobscura]
          Length = 1193

 Score =  505 bits (1300), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 314/923 (34%), Positives = 505/923 (54%), Gaps = 67/923 (7%)

Query: 3   CVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQI 62
           C+ IP+Q+++E + V  DQLP D  ++L ILK E+APL +W+ ++  Y+KQ K + F  +
Sbjct: 4   CIEIPLQDTDEVIEVDPDQLP-DCLEVLSILKQERAPLHVWVNVSLAYYKQKKTDDFVTL 62

Query: 63  LEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASR 122
           LE+   PE ++ Y D   + +  L+ L  +Y      E  + +K E F+ AT  Y  A +
Sbjct: 63  LEDSRGPEANKEYRDSDKDLMRALDMLAAHYVQEAYREKSKDKKRELFMKATNLYTNADK 122

Query: 123 IDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDS 181
           I M++ S  +G+    L +G+ ++QA + F  VL     N+P+LLG+AC+ FNR  Y  +
Sbjct: 123 IIMYDQSHLLGRAYFCLLEGDKMDQADAQFNFVLNQSPSNIPSLLGKACIAFNRKDYRGA 182

Query: 182 LEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMD 241
           + FYK+AL+ +P+CP  +R+G+  C  K+G   KA+ AF+RALQLD + V AL+ LAV+ 
Sbjct: 183 MAFYKKALRTNPNCPANVRIGMAHCFLKMGNPEKAKLAFERALQLDQQCVGALIGLAVLK 242

Query: 242 LQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG 301
           L   E    + G++ + +A+ I     M LN+LANHFFF   +  V  L   A   T + 
Sbjct: 243 LNQLEPESNKLGVQMLSKAYTIDNANPMVLNHLANHFFFKKDYQKVHHLALHAFHNTENE 302

Query: 302 PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSA 361
             ++ S Y LARS+H++ DY++A  YY  S +    P  F+ P+YGLGQ+ +  GD  +A
Sbjct: 303 AMRAESCYQLARSFHAQSDYDQAFQYYYQSTQIA--PANFVLPHYGLGQMYIYRGDTENA 360

Query: 362 LTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKIDPRDAQAFIDLGE 418
              FEKVL+I P N ET+K LG +Y       K   A+  L+K  +  P D +A+I+L +
Sbjct: 361 AQCFEKVLKIQPGNYETMKILGSLYAHSNSQSKRDMAKTHLKKVTEQFPDDIEAWIELAQ 420

Query: 419 LLISSDTGAALDAFKTARTLLK-KAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGD 477
           +L  +D  A+L A+ TA  +LK KA  E+P E+ NN+  +H+  G+   A    + AL  
Sbjct: 421 ILEQNDLAASLAAYGTASKILKDKAKYEIPAEIQNNVSSLHYRLGDLIEAKVKLESALQH 480

Query: 478 GIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQ 537
            I  + +D                 KD++ +   +            VT+ +NLARL E 
Sbjct: 481 AI--SEMD-----------------KDVKYYESIQ------------VTMKYNLARLNEA 509

Query: 538 IHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALS 597
           +     A  LY+ IL ++ +Y+D YLRL  +A+ +  + ++ +   +AL +N   P+A S
Sbjct: 510 MSSYDVADKLYKEILKEHPNYIDCYLRLGCMARDKGLIFVASDFFKDALNINNDNPDARS 569

Query: 598 MLGDLELKNDDWVKAKETFRAA-SDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATH 656
           +LG+L L    +   ++ F     +     D+Y+ ++LGN++    L    R  + E  H
Sbjct: 570 LLGNLHLAKMQFALGQKNFETILKNPATSTDAYSLIALGNFS-LQTLHQPSRDKEKERKH 628

Query: 657 LEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDV 716
            EKA  ++ +V+     N++A NG G VLA KG    ++D+F QV+EA +        DV
Sbjct: 629 QEKALAIFKQVLRNDPRNIWATNGIGAVLAHKGCVIEARDIFAQVREATA-----DFSDV 683

Query: 717 WINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRA 776
           W+N+AHVY  Q  +  A++MY+NC++KFY + + +++ YLAR +  A +  + K  LL+A
Sbjct: 684 WLNIAHVYVEQKQYISAIQMYENCMKKFYKHNNVEVMQYLARAYLRANKLVEAKAVLLKA 743

Query: 777 IHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLH 836
             +AP +  L F+  V + + + + L+  + T + V   V ELE A + F +LS      
Sbjct: 744 RRVAPQDTVLLFNIAVVLSRLAMAILKDEKSTLEVVLQAVHELELAHKYFQYLS------ 797

Query: 837 LHGFDEKKINTHV-----EYCKHLLDAAKIHREAAER---EEQQNRQRQEAARQA---AL 885
           +HG D+ + N  V       C+ LL  A+ H   A R   EE+  R++QE  R+A    +
Sbjct: 798 VHG-DKNRFNIEVAGVEANTCQDLLSQAQYHVGRARRIDEEERSLRRKQEEEREAFKLKV 856

Query: 886 AEEARRKAEE---QKKYLLEKRK 905
           AE+ +R+ EE    +  LL KR+
Sbjct: 857 AEQRKRREEEAQTSRDQLLAKRQ 879


>gi|241176305|ref|XP_002399529.1| tpr repeat nuclear phosphoprotein, putative [Ixodes scapularis]
 gi|215495156|gb|EEC04797.1| tpr repeat nuclear phosphoprotein, putative [Ixodes scapularis]
          Length = 1095

 Score =  502 bits (1293), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 313/936 (33%), Positives = 508/936 (54%), Gaps = 67/936 (7%)

Query: 4   VYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQIL 63
           + IP+++++E + +  DQLP D  ++L IL+ EQA L LW+ +A EY++QGKVE F ++L
Sbjct: 5   IEIPLRDTDEVIELDFDQLP-DGDEVLGILRQEQAQLHLWVSLALEYYRQGKVEDFVRLL 63

Query: 64  EEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRI 123
           E G + E    Y D   +++  L+ L  YY +    E  +  K E F  AT  Y  A +I
Sbjct: 64  EAGRT-EARLDYGDFEQDQMTCLDTLAAYYVHKASREKSKDRKHELFTKATLLYTTADKI 122

Query: 124 DMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSL 182
            M+  +  +G+    L +G+ ++QA + F  VL    +N+P+LLG+AC+ FN+  Y  +L
Sbjct: 123 IMYTQNHLLGRAYFCLLEGDKMDQADAQFNFVLNQSPNNIPSLLGKACIAFNKKDYRGAL 182

Query: 183 EFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDL 242
            FYK+AL+ +P+CP  +RLG+G C Y+LG+  KAR AF+RAL LDP+ V AL  LAV+ L
Sbjct: 183 AFYKKALRTNPNCPAEVRLGMGHCFYRLGKQEKARAAFERALALDPQCVGALAGLAVLQL 242

Query: 243 QANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGP 302
                   R G++ + RA+ + P C + LN LANHFFF   +  V+ L   A   T +  
Sbjct: 243 NLKGPEATRTGVQMLSRAYAVDPSCPVVLNQLANHFFFKKDYGKVQHLALHAFHNTENEA 302

Query: 303 TKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSAL 362
            ++ S Y LARS+H + D+++A  YY  + +    P  F+ P++GLGQ+ +  GD  +A 
Sbjct: 303 MRAESCYQLARSFHVQEDFDQAFQYYYQATQ--FAPTSFVLPHFGLGQMYIFRGDVDNAA 360

Query: 363 TNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKIDPRDAQAFIDLGEL 419
             FEKVL+  P N ET+K LG +Y       K   A+  L+K  +  P D +A+I+L ++
Sbjct: 361 QCFEKVLKAQPGNYETMKILGSLYANSSSQSKRDQAKTHLKKVTEQFPEDVEAWIELAQI 420

Query: 420 LISSDTGAALDAFKTARTLLK-KAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDG 478
           L  SD  AAL A+ TA  LL+ K   ++P E+L+N+G +HF  G  + A + ++ +L   
Sbjct: 421 LEQSDVQAALSAYGTATRLLQDKVKADIPPEILSNVGALHFRMGNLQEARRYYEASL--- 477

Query: 479 IWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQI 538
                   +++T                     E+  +        VT  +NLARL E +
Sbjct: 478 -------ERSRT---------------------ESGNDEHYYGSISVTTTYNLARLYEAL 509

Query: 539 HDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSM 598
                A   Y+ IL ++ +YVD YLRL  +A+ R  +  + +   EAL+VN ++P++ S+
Sbjct: 510 SLFDRAEQAYKNILREHPNYVDCYLRLGCMARDRGQIYEASDWFKEALQVNQEHPDSWSL 569

Query: 599 LGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLE 658
           +G+L L   +W   ++ F        G D+Y+ ++LGN  +   L    R    E  H +
Sbjct: 570 IGNLHLAKQEWGPGQKKFERILKGAPG-DAYSLVALGNV-WLQTLHQPMRDRDKERRHQD 627

Query: 659 KAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWI 718
           +A  +Y +V+     N++AANG G VLA KG    S+D+F QV+EA +        DVW+
Sbjct: 628 RALAMYKQVLRLDPRNIWAANGVGAVLAHKGYISESRDIFAQVREATA-----DFCDVWL 682

Query: 719 NLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIH 778
           N+AH+Y  Q  +  A++MY+NC     ++      L+         + ++CK+ LLRA  
Sbjct: 683 NIAHIYVEQKQYVAAIQMYENCCASLRHHQRGHPDLWGGLCS-ACNRLRECKRILLRARR 741

Query: 779 LAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLH 838
           +AP +  L ++  + +Q+ +A  L+  + +   V S V EL  A R F +LS      +H
Sbjct: 742 VAPQDTLLLYNIALVLQRLAAQCLRDDKSSLATVLSAVHELGLAHRYFQYLS------VH 795

Query: 839 G----FDEKKINTHVEYCKHLLDAAKIHREAAER---EEQQNRQRQEAARQAALAEEARR 891
           G    +D  +       C+ LL  A+ H   A R   EE++ R++QE  R+A      RR
Sbjct: 796 GDRMKYDLAQAAIESRQCQDLLSQAQYHVARARRMDEEEREIRRKQEEEREA-----LRR 850

Query: 892 KAEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVKARI 927
           K  E+++ +LE++K E E+  + +++E  ++ K+++
Sbjct: 851 KISEEQR-ILEEQKQEQERAMIMKRQEFVEKSKSKL 885


>gi|321453432|gb|EFX64668.1| hypothetical protein DAPPUDRAFT_204585 [Daphnia pulex]
          Length = 1195

 Score =  501 bits (1289), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 307/938 (32%), Positives = 508/938 (54%), Gaps = 59/938 (6%)

Query: 1   MACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFR 60
           M  V IP+++++E + +  DQLP D  +++ ILK E A + +W+ +A EY  Q K+  F 
Sbjct: 1   MGSVEIPLRDTDEVIELFFDQLP-DGDEVIQILKQEHAQIHIWVTLAVEYNNQNKIADFV 59

Query: 61  QILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKA 120
           ++LE  S  E +  Y D   +++  L+ L  +Y      E  + +K E F  AT  Y  A
Sbjct: 60  KVLE-ASRTESNMNYKDSEKDQMKALDTLAAHYVQQANREKNKDKKRELFTKATHLYTTA 118

Query: 121 SRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYS 179
            +I M++ +  +G+  L L +G+ ++QA + F  VL    DN+P+LLG+AC+ FN+  Y 
Sbjct: 119 DKIIMYDQNHLLGRAYLCLLEGDKMDQADAQFNFVLNQSPDNIPSLLGKACISFNKKDYK 178

Query: 180 DSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAV 239
            +L +YK+AL+ + +CP  +RLG+G C  KLG   KAR AF+RAL LDP+ V ALV +A+
Sbjct: 179 AALAYYKKALRTNATCPAGVRLGMGHCFLKLGNADKARLAFERALDLDPKCVGALVGMAI 238

Query: 240 MDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTN 299
           ++L   E+  IR G++ + RA+ +     M LN+LANHFFF   +  V+ L   A   T 
Sbjct: 239 LELNLQESDSIRNGVQLLSRAYAVDSSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNTE 298

Query: 300 HGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFR 359
           +   ++ S Y +AR++H +GDY++A  YY  + +  +    FI P++GLGQ+ +  GD  
Sbjct: 299 NEAMRAESCYQMARAFHVQGDYDQAFQYYYQATQFAST--NFILPHFGLGQMYIYRGDTE 356

Query: 360 SALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKIDPRDAQAFIDL 416
           +A   FE+VL+  P N ET+K LG +Y       K   A+  L+K  +  P D +A+I+L
Sbjct: 357 NAAQCFERVLKAQPGNYETMKILGSLYAASSSQSKRDIAKTHLKKVTEQFPDDVEAWIEL 416

Query: 417 GELLISSDTGAALDAFKTARTLLK-KAGEEVPIEVLNNIGVIHFEKGEFESAH----QSF 471
            ++L  SD   +L A+ TA  +LK K   ++P E+LNN+G +++  G  E +     QS 
Sbjct: 417 AQILEQSDLQGSLSAYSTAMKILKEKVQADIPPEILNNVGALYYRLGNLEESRKYFEQSI 476

Query: 472 KDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNL 531
           + A  D    T  ++  +   ++ +                            VT  +NL
Sbjct: 477 ERAKSDAEQETPAENSEQEPQVENAIC--------------------------VTTNYNL 510

Query: 532 ARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGK 591
            R+ E +     A   Y+  L ++ +YVD YLRL  +A+ R  +  + +   EAL++N +
Sbjct: 511 GRIYEGLFLCDKAEKNYKDTLKEHPNYVDCYLRLGCMARDRGQIYEASDWFKEALQINNE 570

Query: 592 YPNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYFAALRNEKRAP 650
           +P+A S++G+L L   +W   ++ F R         DSY+ ++LGN  +   L    R  
Sbjct: 571 HPDAWSLIGNLHLAKMEWGPGQKKFERILKQPATATDSYSLIALGNV-WLQTLHVPTRDK 629

Query: 651 KLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVF 710
           + E  H ++A  LY  V+     N++AANG G VLA KG    ++D+F  V+EA +    
Sbjct: 630 EKEKRHQDRALTLYKTVLKNDHRNIWAANGIGCVLAHKGCIPEARDIFASVREATA---- 685

Query: 711 VQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCK 770
               DVW+N+AH+Y  Q  +  A++MY+NC+RKF+ +   +IL YL+R H+ A + ++ K
Sbjct: 686 -DFSDVWLNIAHIYVEQKQYVSAIQMYENCIRKFFRHPHVEILQYLSRAHFRAGKLREAK 744

Query: 771 KSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLS 830
            SLL+A H+AP +  L F+  + +Q+ +   L+  +     V   V+EL+ + + F  LS
Sbjct: 745 LSLLKAQHVAPHDTVLLFNTALVLQRLATQILKDEKSDLQTVLQAVSELQLSHKFFQWLS 804

Query: 831 AASNLHLHGFDEKKINTHVEYCKHLLDAAKIH----REAAEREEQQNRQRQEAARQAALA 886
              N     +D         +C  LL  A+ H    R  AE EE++ R++QE  R     
Sbjct: 805 V--NGDRMRYDLAFAAAEARHCGDLLSQAQYHVARARSLAE-EEKRMRKKQEEER----- 856

Query: 887 EEARRKAEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVK 924
            EA R  + ++++ LE+ + ++++K L+ +EE  ++ K
Sbjct: 857 -EAFRTKQREEQHRLEESRRQEQEKLLKLREEFIEKTK 893


>gi|26333645|dbj|BAC30540.1| unnamed protein product [Mus musculus]
          Length = 769

 Score =  501 bits (1289), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 295/809 (36%), Positives = 463/809 (57%), Gaps = 55/809 (6%)

Query: 4   VYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQIL 63
           + IP+++++E + +  DQLP +  +++ ILK E   L +W+ +A EY+KQGK E+F ++L
Sbjct: 6   IEIPLRDTDEVIELDFDQLP-EGDEVISILKQEHTQLHIWIALALEYYKQGKTEEFVKLL 64

Query: 64  EEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKAS 121
           E   +  ID    Y D   +++  L+ L  YY    + E  +  K++    AT  Y  A 
Sbjct: 65  E---AARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNKKDLITQATLLYTMAD 121

Query: 122 RIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSD 180
           +I M++ +  +G+    L +G+ ++QA + F  VL    +N+PALLG+AC+ FN+  Y  
Sbjct: 122 KIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPALLGKACISFNKKDYRG 181

Query: 181 SLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVM 240
           +L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF RAL+L+ + V ALV LAV+
Sbjct: 182 ALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALELNSKCVGALVGLAVL 241

Query: 241 DLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 300
           +L   EA  I+ G++ + RA+ I P   M LN+LANHFFF   +  V+ L   A   T  
Sbjct: 242 ELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNTEV 301

Query: 301 GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRS 360
              ++ S Y LARS+H + DY++A  YY  + +  +    F+ P++GLGQ+ +  GD  +
Sbjct: 302 EAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASS--SFVLPFFGLGQMYIYRGDKEN 359

Query: 361 ALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKIDPRDAQAFIDLG 417
           A   FEKVL+ YP+N ET+K LG +Y      EK   A+  L+K  +  P D +A+I+L 
Sbjct: 360 ASQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKVTEQYPDDVEAWIELA 419

Query: 418 ELLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALG 476
           ++L  +D   AL A+ TA R L +K   +VP E+LNN+G +HF  G    A + F     
Sbjct: 420 QILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYF----- 474

Query: 477 DGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVL--FNLARL 534
               L  LD                        R + +  H E  +N ++V   +NLARL
Sbjct: 475 ----LASLD------------------------RAKAEAEHDEHYYNAISVTTSYNLARL 506

Query: 535 LEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPN 594
            E + +   A  LY+ IL ++ +YVD YLRL A+A+ + N   + +   EAL++N  +P+
Sbjct: 507 YEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEASDWFKEALQINQDHPD 566

Query: 595 ALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLE 653
           A S++G+L L   +W   ++ F R         D+Y+ L+LGN  +   L    R  + E
Sbjct: 567 AWSLIGNLHLAKQEWGPGQKKFERILKQPATQSDTYSMLALGNV-WLQTLHQPTRDREKE 625

Query: 654 ATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQM 713
             H ++A  +Y +V+     NLYAANG G VLA KG F  ++D+F QV+EA +      +
Sbjct: 626 KRHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHKGYFREARDVFAQVREATA-----DI 680

Query: 714 PDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSL 773
            DVW+NLAH+Y  Q  +  A++MY+NCLRKFY + + +++LYLAR  ++  + Q+CK++L
Sbjct: 681 SDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVVLYLARALFKCGKLQECKQTL 740

Query: 774 LRAIHLAPSNYTLRFDAGVAMQKFSASTL 802
           L+A H+APS+  L F+  + +Q+ + S L
Sbjct: 741 LKARHVAPSDTVLMFNVALVLQRLATSVL 769


>gi|195014701|ref|XP_001984064.1| GH15212 [Drosophila grimshawi]
 gi|193897546|gb|EDV96412.1| GH15212 [Drosophila grimshawi]
          Length = 1192

 Score =  500 bits (1287), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 315/924 (34%), Positives = 507/924 (54%), Gaps = 70/924 (7%)

Query: 3   CVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQI 62
           C+ IP+Q+++E + V  DQLP + S++  IL  E+APL +W+ +A  Y+KQ K + F  +
Sbjct: 4   CIEIPLQDTDEVIEVDPDQLP-ECSEVFSILLQERAPLHVWVNVALAYYKQKKTDDFIML 62

Query: 63  LEEGSSP-EIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKAS 121
           LE       +D  Y D + +++  L+ L  +Y      E  + +K E F+ AT  Y  A 
Sbjct: 63  LEAAREKGTVD--YRDFKTDQMRALDMLAAHYVQEAYREKSKDKKRELFMKATNLYTNAD 120

Query: 122 RIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSD 180
           +I M++ S  +G+    L +G+ ++QA + F  VL     N+P+LLG+AC+ FNR  Y  
Sbjct: 121 KIIMYDQSHLLGRAYFCLLEGDKMDQADAQFNFVLNQSPSNIPSLLGKACIAFNRKDYRG 180

Query: 181 SLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVM 240
           ++ FYK+AL+ +P+CP  +R+G+  C  K+G   KA+ AF+RALQLD + V AL+ LAV+
Sbjct: 181 AMAFYKKALRTNPNCPANVRIGMAHCFLKMGNAEKAKLAFERALQLDQQCVGALIGLAVL 240

Query: 241 DLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 300
            L   E    + G++ + +A+ I     M LN+LANHFFF   +  V  L   A   T +
Sbjct: 241 KLNQLEPESNKLGVQMLSKAYTIDNANPMVLNHLANHFFFKKDYQKVHHLALHAFHNTEN 300

Query: 301 GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRS 360
              ++ S Y LARS+H++ DY++A  YY  S +    P  F+ P+YGLGQ+ +  GD  +
Sbjct: 301 EAMRAESCYQLARSFHAQSDYDQAFQYYYQSTQIA--PANFVLPHYGLGQMYIYRGDTEN 358

Query: 361 ALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKIDPRDAQAFIDLG 417
           A   FEKVL+I P N ET+K LG +Y       K   A+  L+K  +  P D +A+I+L 
Sbjct: 359 AAQCFEKVLKIQPGNYETMKILGSLYAHSNSQTKRDMAKTHLKKVTEQFPEDIEAWIELA 418

Query: 418 ELLISSDTGAALDAFKTARTLLK-KAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALG 476
           ++L  +D  A+L+A+ TA ++L+ KA  E+P E+ NN+  +++  G  + A  + + AL 
Sbjct: 419 QILEQNDLQASLNAYGTASSILRDKAKYEIPAEIQNNVASLYYRLGNLKMAKHTLESALK 478

Query: 477 DGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLE 536
                             AS+ M   KD++ +   +            VT+ +NLARL E
Sbjct: 479 -----------------HASSEM--DKDVKYYESIQ------------VTMKYNLARLNE 507

Query: 537 QIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNAL 596
            +     A  LY+ IL ++ +Y+D YLRL  +A+ +  + ++ +   +AL +N   P+A 
Sbjct: 508 AMSSFDVADKLYKEILKEHPNYIDCYLRLGCMARDKGLIFVASDFFKDALNINNDNPDAR 567

Query: 597 SMLGDLELKNDDWVKAKETFRAA-SDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEAT 655
           S+LG+L L    +   ++ F     +   G DSY+ ++LGN++    L    R  + E  
Sbjct: 568 SLLGNLHLAKMQFALGQKNFETILKNPATGSDSYSLIALGNFS-LQTLHQPSRDKEKERK 626

Query: 656 HLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPD 715
           H EKA  +Y +V+     N++A NG G VLA KG    ++D+F QV+EA +        D
Sbjct: 627 HQEKALAIYKQVLRTDPRNIWATNGIGAVLAHKGCVIEARDIFAQVREATA-----DFCD 681

Query: 716 VWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLR 775
           VW+N+AHVY  Q  +  A++MY+NC++KFY + + +++ YLAR +  A +  + K  LLR
Sbjct: 682 VWLNIAHVYVEQKQYISAIQMYENCMKKFYKHNNVEVMQYLARAYLRANKLVEAKSVLLR 741

Query: 776 AIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASNL 835
           A  +AP +  L F+  V + + + + L+  + T + V   V ELE A + F +LS     
Sbjct: 742 ARRVAPQDTVLLFNIAVVLSRLAMAILKDEKSTLEVVLQAVHELELAHKYFQYLS----- 796

Query: 836 HLHGFDEKKINTHV-----EYCKHLLDAAKIHREAAER---EEQQNRQRQEAARQA---A 884
            +HG D+ + N  V       C+ LL  A+ H   A R   EE+  R+RQE  R+A    
Sbjct: 797 -VHG-DKTRFNIEVAAVEANTCQDLLSQAQYHVGRARRIDEEERTLRRRQEDEREAFKLK 854

Query: 885 LAEEARRKAEE---QKKYLLEKRK 905
           +AE+ +++ EE    +  LL KR+
Sbjct: 855 IAEQRKKREEEAQSSRDQLLAKRQ 878


>gi|328868476|gb|EGG16854.1| RNA polymerase II complex component [Dictyostelium fasciculatum]
          Length = 1047

 Score =  499 bits (1285), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 311/905 (34%), Positives = 507/905 (56%), Gaps = 87/905 (9%)

Query: 4   VYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQIL 63
           +YIP++ SE  V V+ D LP    D+++IL+ E APLD+WL IA EY+KQ  ++ F+ +L
Sbjct: 37  IYIPIRGSERYVSVSSDNLP-SVKDVIEILRGEVAPLDIWLQIAIEYYKQNHIDDFKTLL 95

Query: 64  EEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRI 123
                P  +E+Y D ++ERIA+LNA+  YYT LG +E  + +KE+++  AT  + KA RI
Sbjct: 96  GIALDPAAEEFYKDSKFERIAMLNAMASYYTQLGNVEKDKGKKEDYYQEATYRFTKADRI 155

Query: 124 DMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDN-----------VPALLGQACVE 172
           D  +P T++GK  LLLAKGEV++A+  F+  L A  +             PA LG +CV 
Sbjct: 156 DPRQPLTFIGKAALLLAKGEVDRAALNFQQALSASSNTHNSNTSTTLPLFPAKLGYSCVL 215

Query: 173 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 232
           FN+G  + ++E  ++ L  +P    ++RLG+G C YKLG++  A++AFQR L++D +NV+
Sbjct: 216 FNKGEINKAVESLQKLLIQNP-VSASVRLGLGYCFYKLGKIEAAKKAFQRVLEIDLDNVD 274

Query: 233 ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTE 292
           ALVALA +     +   I  GM+ + +A+E+ P   + LN LANHFF+ G +  V  L +
Sbjct: 275 ALVALATIHTNQGD---IDTGMKLIVQAYELAPNNPIVLNQLANHFFYKGDYTKVHALAQ 331

Query: 293 TALAVTNHGPTKSHSYYNLARSYHSKGDYEKA-GLYYMASVKEINKPHEFIFPYYGLGQV 351
            A++ T+    K+ + Y +A++YH+   + +A   Y+ A++K      +F    +GLGQV
Sbjct: 332 AAMSNTDINQIKAEASYIIAKAYHATDKWNEALQNYHQATLKS----PDFYLAQFGLGQV 387

Query: 352 QLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIY---VQLGQIEKAQELLRKAAKIDPR 408
            L   D+  A+  FE VLE  P+N E L+ LG +Y    Q   IEK + +L K   ++P 
Sbjct: 388 YLHNNDYEKAVGCFEAVLEKQPENYEALQILGSLYKVSSQSKNIEKIKNVLMKTTLLNPN 447

Query: 409 DAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAH 468
           D+  +++L +LL SSD  ++LDA++    LLKK G E+  E+LNN+ V++  KG F +A 
Sbjct: 448 DSSNWLELAQLLESSDVSSSLDAYEKGINLLKKDGIEISTEILNNMAVLNHRKGSFSNAE 507

Query: 469 QSFKDALGDGIWLTLLDSKTKTYVIDASASMLQ-FKDMQLFHRFENDGNHVELPWNKVTV 527
           +         ++L          VI+AS   L+ FK +                   +T 
Sbjct: 508 K---------LYLK---------VIEASGHKLEDFKAVN------------------ITT 531

Query: 528 LFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALK 587
            +NLARL E ++    A  LY+ I+ ++ +Y+D YLRL AIAK+  N   S E   EAL 
Sbjct: 532 TYNLARLYESMNKFDQARQLYKGIIKEHPNYMDCYLRLGAIAKSEGNSYESGEWYKEALN 591

Query: 588 VNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRNEK 647
           ++   P   S+ G L L N+ W  A++ F    +  +  D YA+++L N  YF A   + 
Sbjct: 592 IDPNSPETWSLYGALHLSNEQWNHAQKKFEQILEVVNKNDPYASIALANI-YFNA---KY 647

Query: 648 RAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASG 707
           + P+    +L  A+  Y+R++ +H  N+YAANG G+V A K    ++ ++F Q++E+A  
Sbjct: 648 QYPEKSEKYLSIAESFYSRILSRHNDNIYAANGLGMVAAAKNNLLLATEIFIQLRESA-- 705

Query: 708 SVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQ-ILLYLARTHYEAEQW 766
              + +  + +NLAHVY ++  F  A+K+Y+  L+K     D + I  YL++ ++ A ++
Sbjct: 706 ---IDVSTISVNLAHVYMSRNLFDNAIKLYEGSLKKCNNTKDMEAIYGYLSKAYFLARRY 762

Query: 767 QDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVF 826
           Q+CK+ L +AIH +PSN  L ++  +A++  S + L+K  ++  EV S   E+  A  + 
Sbjct: 763 QECKQILKKAIHFSPSNLALWYNLALAIESQSMAILEKPNKSLPEVASVNREVVYARHLL 822

Query: 827 SHLSAASNLHLHGFDEKKINTHVEYCK-HLLDAAKIHREAAER-------EEQQNRQRQE 878
            +L +           +K N  V+ CK HLL   ++ ++  E        E +  ++R+ 
Sbjct: 823 MNLVSQKT--------QKPNYDVKRCKTHLLSLTELAKKVGEELKSLEDLETENAKKRES 874

Query: 879 AARQA 883
           AA +A
Sbjct: 875 AAVEA 879


>gi|195995661|ref|XP_002107699.1| hypothetical protein TRIADDRAFT_19990 [Trichoplax adhaerens]
 gi|190588475|gb|EDV28497.1| hypothetical protein TRIADDRAFT_19990 [Trichoplax adhaerens]
          Length = 911

 Score =  497 bits (1280), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 317/922 (34%), Positives = 500/922 (54%), Gaps = 65/922 (7%)

Query: 4   VYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQIL 63
           V IP+ +S+E + +  DQLP D  + L ILK E+  L +W ++A++Y+K G+ + F  +L
Sbjct: 7   VEIPLHDSDEVIELDFDQLP-DGGECLAILKEERPQLRIWNVLAQQYYKLGEQDAFLSML 65

Query: 64  EEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRI 123
           E  ++ E    Y D   + +  L++L  YY  LGK    +    ++F  A Q + K  +I
Sbjct: 66  ETATT-EATMSYDDSDKDLMTTLDSLANYYVELGKKANNKDLTRDYFAKAAQLFGKGDKI 124

Query: 124 DMHEPSTWVGKGQLLLAKGEVEQASSAFKIVL-EADRDNVPALLGQACVEFNRGRYSDSL 182
            MH     V +G   LA G++EQA + F  VL + ++ N PALLG+A + F+R  Y+ +L
Sbjct: 125 IMHHEGHLVSRGCFYLADGKLEQAETQFNFVLTQLNKQNPPALLGKASILFSRKDYNGAL 184

Query: 183 EFYKRALQVHP-SCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMD 241
             YK  L++ P +C   +RLGIG C  KL +L  AR+AF+RALQLDP  V A+VALAV++
Sbjct: 185 SLYKEVLKLKPETCRADVRLGIGHCYAKLNKLNLARRAFERALQLDPRCVGAMVALAVLE 244

Query: 242 LQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG 301
           L  N A  IR G++ + RA+ I    AM LN+LANHFF+      V+ L   A   TN  
Sbjct: 245 LNNNRAESIRNGVDLLSRAYTIDQTNAMVLNHLANHFFYKKDFNKVQHLALHAFHSTNVE 304

Query: 302 PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSA 361
           P ++ S Y LAR +HS  DY++A  YY  + +  +    ++ P++GLGQ+ L   D  +A
Sbjct: 305 PIQAESCYQLARVFHSMQDYDQAFKYYYQATQFADS--NYVLPHFGLGQLYLARNDPTNA 362

Query: 362 LTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKIDPRDAQAFIDLGE 418
            ++FEKVL++  DN E++K LG IY +    EK   A+ LL+KA    P D +A+I+L  
Sbjct: 363 ASSFEKVLKVQSDNYESMKILGSIYARSNNEEKRERAKILLQKATTQHPDDIEAWIELAG 422

Query: 419 LLISSDTGAALDAFKTARTLLKKAGE-EVPIEVLNNIGVIHFEKGEFESAHQSFKDALGD 477
           +L  SD   AL A+ T+  LL++  E + P E+LNN+  +HF+ G    A ++F  AL  
Sbjct: 423 ILEGSDIQGALSAYGTSSRLLQETLETDTPPEILNNVAALHFKLGNLLEAMKNFSAAL-- 480

Query: 478 GIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQ 537
                    + K    +++     F  +                   VT+ +N+ARL E 
Sbjct: 481 --------ERAKLEANESTEGSSYFNTI------------------SVTITYNVARLHEA 514

Query: 538 IHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALS 597
           + +   A  LY+ IL  + +Y+D YLRL  +A+ + +   + +   EAL +  ++ +  S
Sbjct: 515 LCEHDEAEKLYKQILKDHPNYIDCYLRLGCMARDKGHFYEASDWYTEALVIEREHKDTWS 574

Query: 598 MLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATH 656
           ++G+L +   +W  A++ + R  +   D  D+Y  +++GN  +   L    + P     H
Sbjct: 575 LIGNLHMMKQEWGPAQKKYERILNQNKD--DTYGLVAMGNI-WLQTLYQPTKDPDKNRRH 631

Query: 657 LEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDV 716
            ++A  LY +VI     N+YAANG G VLA+      S+++F QV+EA +      M DV
Sbjct: 632 RDRALSLYKQVIRLDPRNIYAANGIGAVLAQSSFHQESREIFAQVREATA-----DMFDV 686

Query: 717 WINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRA 776
           W+NLAHVY  Q  ++ A++MYQNC+++F  N   ++LLYLAR  ++  + Q+CK +L++A
Sbjct: 687 WLNLAHVYTEQKQYSTAIQMYQNCIKRFGKNQSTEVLLYLARVFFKDGRLQNCKSALVKA 746

Query: 777 IHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLH 836
            H+AP    L FD  + +Q+ +  +L+       +V+  V +L+ A R F+ LS   +  
Sbjct: 747 CHVAPQETLLLFDVCLVLQRIATVSLKDENSNLKDVQEAVDQLKLAHRYFTFLSKVGD-- 804

Query: 837 LHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEAARQAALAEEARRKAEEQ 896
              FD  +       C  LL  AK H   A++++ +               E  RK EE+
Sbjct: 805 KSKFDLNQAQLEARQCVDLLSQAKYHVSRAKKKQDEEL-------------ELIRKQEEE 851

Query: 897 KKYLLEKRKLEDEQKRLRQQEE 918
            +  LEKRK E+ Q   RQ+EE
Sbjct: 852 HQAYLEKRKAEEIQ---RQKEE 870


>gi|47230441|emb|CAF99634.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1210

 Score =  495 bits (1275), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 328/952 (34%), Positives = 511/952 (53%), Gaps = 69/952 (7%)

Query: 2   ACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQ 61
             + IP+++++E + +  DQLP +  +++ ILK E   L +W+ +A EY+KQGK E F +
Sbjct: 4   GSIEIPLRDTDEVIELDFDQLP-EGDEVISILKQEHTQLHIWIALALEYYKQGKTEDFVK 62

Query: 62  ILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNK 119
           +LE   +  ID    Y D   +++  L+ L  YY    + E  +  K+E    AT  Y  
Sbjct: 63  LLE---AARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDAKKELITQATLLYTM 119

Query: 120 ASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLG-QACVEFNRGR 177
           A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+PALLG +AC+ FN+  
Sbjct: 120 ADKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSTNNIPALLGSKACISFNKKD 179

Query: 178 YSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVAL 237
           Y  +L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF RAL+L+ + V ALV L
Sbjct: 180 YRGALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFGRALELNSKCVGALVGL 239

Query: 238 AVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAV 297
           AV++L   EA  I+ G++ + RA+ I P   M LN+LANHFFF   +  V+ L   A   
Sbjct: 240 AVLELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFD- 298

Query: 298 TNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGD 357
           T            ++   H + DY++A  YY  + +  +    F+ P++GLGQ+ +   D
Sbjct: 299 TQRLKLCMQRVATVSAVVHVQEDYDQAFQYYYQATQFASST--FVLPFFGLGQMYVYRRD 356

Query: 358 FRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKIDPRDAQAFI 414
             +A   FEKVL+ YP+N ET+K LG +Y      EK   A+  L+K  +  P D +A+I
Sbjct: 357 KENAAQCFEKVLKSYPNNYETMKILGSLYAASDDQEKRDIAKGHLKKVTEQYPDDVEAWI 416

Query: 415 DLGELLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKD 473
           +L ++L  +D   AL A+ TA R L  K   +VP E+LNN+G +HF  G    A     D
Sbjct: 417 ELAQILEQTDIQGALSAYGTATRILQDKVQADVPPEILNNLGALHFRLGNLGEAKV---D 473

Query: 474 ALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWN--KVTVLFNL 531
             G+ +   +L S  +++  +          +    R + +G H E  +N   VT  +NL
Sbjct: 474 GSGEPVTSLILRSFNQSFKRELCPKYF----LASLERAKAEGEHDEHYYNAISVTTSYNL 529

Query: 532 ARLLEQIHDTVAASVLYRLILFKYQDYVD---------------------------AYLR 564
           ARL E + +   A  LY+ IL ++ +YVD                            YLR
Sbjct: 530 ARLYEAMCEFHEAEKLYKNILREHPNYVDCKLENTAEMEHKKKSCFCLISFTVWPTGYLR 589

Query: 565 LAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAASDAT 623
           L A+A+ + N   + +   EAL++N  +P+A S++G+L L   +W   ++ F R     +
Sbjct: 590 LGAMARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPS 649

Query: 624 DGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGV 683
              D+Y+ L+LGN  +   L    R  + E  H ++A  +Y +V+     NLYAANG G 
Sbjct: 650 TQNDTYSMLALGNV-WLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDPKNLYAANGIGA 708

Query: 684 VLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRK 743
           VLA KG +  ++D+F QV+EA +      + DVW+NLAH+Y  Q  +  A++MY+NCL+K
Sbjct: 709 VLAHKGYYREARDVFAQVREATA-----DISDVWLNLAHIYVEQKQYISAVQMYENCLKK 763

Query: 744 FYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQ 803
           FY   + ++LLYLAR  ++  + Q+CK+ LL+A H+APS+  L F+  + +Q+ +   L+
Sbjct: 764 FYKYQNTEVLLYLARALFKCGKLQECKQMLLKARHVAPSDTVLMFNVALVLQRLATLVLK 823

Query: 804 KTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHR 863
             +     V S V ELE A R FS+LS A +     FD     +    C  LL  A+ H 
Sbjct: 824 DEKSNLKAVLSAVKELELAHRYFSYLSKAGDKMR--FDLALAASEARQCSDLLSQAQYHV 881

Query: 864 EAAER---EEQQNRQRQEAA----RQAALA--EEARRKAEEQKKYLLEKRKL 906
             A +   EE++ R +QE      RQ  L   EE R K  E++K LLE+R +
Sbjct: 882 ARARKQDEEEKELRAKQEQERDLLRQQLLKEQEEKRNKELEEQKKLLEQRAM 933


>gi|340713450|ref|XP_003395256.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Bombus
           terrestris]
          Length = 1167

 Score =  494 bits (1273), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 304/924 (32%), Positives = 505/924 (54%), Gaps = 71/924 (7%)

Query: 15  VRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQILEEGSSPEIDEY 74
           + + LDQLP +  ++L  L+   A L++W+ +A +Y+KQ ++E F ++L+        +Y
Sbjct: 7   IELDLDQLP-EVDEVLGTLRQGHAQLNVWVSLALDYYKQHRIEDFIKVLQSSRDNASVDY 65

Query: 75  YADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGK 134
             + + ++I +L+ L   Y      E  + +K   F  A Q +  A  I M++ +  + +
Sbjct: 66  RGNEQ-DQIRVLDMLAACYMQEANREKNKVKKRHLFTKAAQLHTNADEIVMYDQNHILSR 124

Query: 135 GQL-LLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHP 193
             L LL + ++ QA + F  +L    +N+P LLG+ACV FNR  Y  +L FYK+AL+++P
Sbjct: 125 AYLCLLERDKMNQADNQFNFILNLSPNNIPCLLGKACVAFNRKNYRGALAFYKKALRINP 184

Query: 194 SCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKG 253
           +CP A+RLG+G C  KL    KAR AF+RALQLD + V ALV L++M L   +   IR G
Sbjct: 185 NCPAAVRLGMGHCFMKLNNQEKARLAFERALQLDGQCVGALVGLSIMQLNEQQPDSIRTG 244

Query: 254 MEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLAR 313
           ++ + +A+ I P  +  LN+LANHFFF   +  V  L   A   T +   ++ S Y LAR
Sbjct: 245 IQMLSKAYIIDPTNSTVLNHLANHFFFKKNYNKVHNLALHAFHNTENDVIRAESCYQLAR 304

Query: 314 SYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYP 373
            +H +G Y +A  YY  ++ +   P  F+ P++GLGQ+ +   D   A   FEKVLE++P
Sbjct: 305 VFHIEGKYNQAFQYYYQAI-QFASP-TFVLPHFGLGQMYIYRDDVEKAEQCFEKVLEVHP 362

Query: 374 DNCETLKALGHIYVQLGQIEK---AQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALD 430
           DNCET+K LG +Y   G   K   A+  LRK  +  P D +A+I+L ++L  SD  AAL+
Sbjct: 363 DNCETMKILGSLYANSGSQSKRDIAKNYLRKVTEQFPDDIEAWIELAQILEESDHKAALN 422

Query: 431 AFKTARTLLKKAGE-EVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTK 489
            + T   +LK+  + ++P E+LNN+G +H+  G  E A ++ + +L              
Sbjct: 423 VYGTVIRILKEQNQTDIPSEILNNVGALHYRLGNLEEAKKNLEVSL-------------- 468

Query: 490 TYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVL--FNLARLLEQIHDTVAASVL 547
                               R E D  H  + +N +TV   +NLARL E +     A  L
Sbjct: 469 -------------------MRSEADALHDPVYYNSITVTTKYNLARLNEALCIFDEAEKL 509

Query: 548 YRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKND 607
           YR IL K+ +Y+D YLRL  +A+ +  +  + +   +AL +N ++P+A  ++G+L L   
Sbjct: 510 YRAILKKHPNYIDCYLRLGCMARDKGEIYEAFDWFKDALSINSRHPDAWILMGNLHLSKM 569

Query: 608 DWVKAKETF-RAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTR 666
            W  A++ F R  ++     D+Y+ ++LGN  +   L  +K+    +  + ++A  +Y +
Sbjct: 570 QWGLAQKKFERIINEPETSTDAYSLIALGNI-WLETLYQDKKGKNRDKKYQKRALAMYKK 628

Query: 667 VIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFA 726
           V+  +  N++AANG G VLA KG  + ++D+F QV++A +     + PDVW+N+AH+Y  
Sbjct: 629 VLRNNPKNIWAANGIGAVLAHKGYVNEARDIFAQVRDATA-----KFPDVWLNIAHIYVE 683

Query: 727 QGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTL 786
           Q  F  A++MY NCLRKFY   D ++L YL R +++A + ++ K +LL+ I +AP +  L
Sbjct: 684 QQQFFNAIQMYINCLRKFYKYHDVEVLQYLGRAYFKAGKLKEAKLTLLKGIRVAPQDTVL 743

Query: 787 RFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGFDEKKI- 845
            ++    +Q  +  TL+  R T   V   V EL  + + F +LS       HG   +++ 
Sbjct: 744 LYNIAFVLQCLAIQTLKDARSTLTTVLEAVRELALSHKYFQYLSR------HGDKIRQLA 797

Query: 846 NTHVEYCKHLLDAAKIHREAAER---EEQQNRQRQEAARQA--ALAEEARRKAEEQKKYL 900
           N     C+ LL  A+ H   A R   EE+  +++QE  RQ       E +RK+EE ++  
Sbjct: 798 NAEAGSCQDLLSQAQYHVARARRLDEEEKILKRKQEEERQVFKIRQTEEKRKSEEMRR-- 855

Query: 901 LEKRKLEDEQKRLRQQEEHFQRVK 924
                 + E++ +++++E+ ++ K
Sbjct: 856 ------QKEEEMIQKRQEYVEKTK 873


>gi|324502334|gb|ADY41027.1| RNA polymerase-associated protein CTR9 [Ascaris suum]
          Length = 1143

 Score =  494 bits (1271), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 288/841 (34%), Positives = 473/841 (56%), Gaps = 55/841 (6%)

Query: 4   VYIPVQNSEEE--VRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQ 61
           V IP+++S E   + +  D+LP DA +++ IL+ E A L +W+ +A  Y+++G    F +
Sbjct: 10  VEIPLRDSTENEIIELDFDRLPDDAKEVIAILRGEHAALHIWVDLALAYYRRGNEADFVR 69

Query: 62  ILE-EGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKA 120
           ILE  GS   +D  YA+   +++  L+ L  YY      E  + +K+E    AT  Y  A
Sbjct: 70  ILELSGSEANLD--YAEYPRDQMRALDTLAAYYVMQNHKERNKEKKKEWQTKATLLYTTA 127

Query: 121 SRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSD 180
            +I M++ +  +G+    L +G+ +QA   F  VL    +N+PA+LG+AC+ F +  Y  
Sbjct: 128 DKIIMYDTNHLLGRAYFCLLEGKTDQAEQQFNFVLNQVGENIPAMLGKACIFFQKKEYRK 187

Query: 181 SLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVM 240
           SL  YK  L+  P CP  +RLGIG C  KLG++ KAR AF+R L+L+P+NV AL+ALA++
Sbjct: 188 SLNCYKSVLRKKPDCPADVRLGIGYCLSKLGKVEKARLAFERVLELEPQNVHALIALAIL 247

Query: 241 DLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 300
           D+   +A GI+ G++ + RA++I     + LN+LANHFF+      VE L   A  +T +
Sbjct: 248 DMNNLDAEGIQNGVQSLGRAYQIDQENPVVLNHLANHFFYRNDMDRVEHLAWHAFQITEN 307

Query: 301 GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRS 360
              ++ S Y LARS+H +G++EKA  +Y  +  +   P  F+ PY+GLGQ+ +   D  +
Sbjct: 308 EAMRAESCYQLARSFHQRGNFEKAFQHYYQAT-QFATP-SFVLPYFGLGQMYIHREDLDN 365

Query: 361 ALTNFEKVLEIYPDNCETLKALGHIYV------QLGQIE---KAQELLRKAAKIDPRDAQ 411
           A+T FEKVL++YP N +TLK LG +Y       Q  +IE   KA+E+L+K  ++ P D +
Sbjct: 366 AITCFEKVLKLYPSNYDTLKVLGSLYAHSEPAEQQEKIERRKKAKEMLKKVVEMCPEDVE 425

Query: 412 AFIDLGELLISSDTGAALDAFKTARTLLKKAGE-EVPIEVLNNIGVIHFEKGEFESAHQS 470
           A I+L +L  SSD  A+LDA+  A   L+K  E +VP E+ NNIG + F  G++E A +S
Sbjct: 426 ALIELAQLTESSDPQASLDAYTKASEFLEKTLEVDVPPEITNNIGSLCFSMGQYEKAKKS 485

Query: 471 FKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFN 530
           F+ A             ++    D +A       +Q                   TV +N
Sbjct: 486 FELA-------------SRKLAEDIAAGQSDLAALQ------------------TTVTYN 514

Query: 531 LARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNG 590
           LAR +E +     A  LY+ IL + Q+Y+D Y+RL  +A+ +  +  S     EA+ V+ 
Sbjct: 515 LARCMEMLCLFDEAERLYKGILHEKQNYIDCYMRLGCLARDKGQIYESSVWFKEAMSVSQ 574

Query: 591 KYPNALSMLGDLELKNDDWVKAKETFRAASDATD-GKDSYATLSLGNWNYFAALRNEKRA 649
            + +A S++G+L +   +W  A++ F       +   D Y+ ++LGN  +   L +  R 
Sbjct: 575 THADAWSLIGNLHMSKCEWAPAQKKFEYILKLNEYHNDPYSLVALGNV-WLETLSSVHRK 633

Query: 650 PKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSV 709
            + +  + E+A  +Y++ +  H  N++AANG G +LA+KG    ++D+F QV+EA +   
Sbjct: 634 REKDKDYRERALMMYSKALKVHPKNIWAANGIGCILAQKGAIQEARDIFAQVREATA--- 690

Query: 710 FVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDC 769
                DVW+N+AH+Y  Q  +  A++MY NC++KF    D  ++ Y+AR +Y+A +  DC
Sbjct: 691 --DFWDVWVNIAHIYMEQKQYVSAIQMYDNCMKKFRRYNDVALMQYMARAYYKAGKLDDC 748

Query: 770 KKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHL 829
           +  L +A+  AP N  ++F+    +QK +  TL+  + + + V   V +L+ A R+F+++
Sbjct: 749 RHMLEKAMCEAPDNLMVKFNYAFVLQKLATQTLRDEKSSLEMVTGAVEDLKTAERIFTYI 808

Query: 830 S 830
           S
Sbjct: 809 S 809


>gi|291227751|ref|XP_002733846.1| PREDICTED: SH2 domain binding protein 1-like, partial [Saccoglossus
           kowalevskii]
          Length = 1197

 Score =  492 bits (1267), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 303/880 (34%), Positives = 489/880 (55%), Gaps = 56/880 (6%)

Query: 49  EYFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEE 108
           EY+KQG  E+F +I E  S  + +  Y D    ++  L+ L  YY    + E  +  K+E
Sbjct: 2   EYYKQGATEEFVKIFE-ASRTDANTEYKDHETHQMTALDTLAAYYVQQARKEKSKDVKKE 60

Query: 109 HFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLG 167
            F  AT+ Y  A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+P+LLG
Sbjct: 61  LFTQATRLYTMADKIIMYDQNHLLGRACFCLFEGDKMDQADAQFNFVLNQSPNNIPSLLG 120

Query: 168 QACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLD 227
           +AC+ FN+  +  +L +YK+AL+  P+CP A+RLG+G C  KL +L KAR AF+RALQL+
Sbjct: 121 KACISFNKKDFRGALAYYKKALRTTPNCPAAVRLGMGHCFMKLSKLDKARLAFERALQLE 180

Query: 228 PENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLV 287
           P  V A+V LA+++L + E   I+KG++ + +A+ I     M LN+LANHFFF   +  V
Sbjct: 181 PSCVGAIVGLAILELNSKEPDSIKKGVQLLSKAYTIDSSNPMVLNHLANHFFFKKDYNKV 240

Query: 288 EQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYG 347
           + L   A   T +   ++ S Y LARS+H +GDY++A  YY  S +  + P  F+ P++G
Sbjct: 241 QHLALHAFHGTENEFIQAESCYQLARSFHVQGDYDQAFQYYYQSTQFASAP--FVLPFFG 298

Query: 348 LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAK 404
           LGQ+ +  GD  +A   FEKVL+  P N ET+K LG +Y      EK   A+  L+K  +
Sbjct: 299 LGQMYIYRGDMENAAQCFEKVLKSQPGNYETMKILGSLYATSPDQEKREIAKGHLQKVVE 358

Query: 405 IDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLK-KAGEEVPIEVLNNIGVIHFEKGE 463
             P D +A+I+L ++L  SD   AL A+ TA  +LK K   +VP E+LNN+G +HF  G 
Sbjct: 359 QFPDDVEAWIELAQILEQSDVQGALSAYGTATRILKEKVQADVPPEILNNVGALHFRLGN 418

Query: 464 FESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWN 523
            + + + ++ +L                                  R +++  H E  ++
Sbjct: 419 LKESKRYYEASL---------------------------------ERSKHEAQHDETYYS 445

Query: 524 --KVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIEL 581
              VT  +NLARL E       A  LY+ IL ++ +YVD YLRL  +A+    +  + + 
Sbjct: 446 AISVTTTYNLARLREATCAFDKAEQLYKNILREHPNYVDCYLRLGCMARDSGQIYDASDW 505

Query: 582 VNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYF 640
             EAL++N  +P+A S++G+L L   +W   ++ F R     +   D+Y+ L+LGN  + 
Sbjct: 506 FKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQSDAYSLLALGNV-WL 564

Query: 641 AALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQ 700
             L    R    E  H ++A  +Y +V+     N+YAANG G VLA+KG    ++D+F+Q
Sbjct: 565 QTLYQPTRDKDKEKRHQDRALAMYKQVLRNDGKNIYAANGIGAVLAQKGYIREARDVFSQ 624

Query: 701 VQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTH 760
           V+EA +      M DVW+NLAH+Y  Q  +  A++MY+NCLRKFY   + +++LYLAR +
Sbjct: 625 VREATA-----DMRDVWLNLAHIYVEQKQYISAIQMYENCLRKFYKYHNTEVMLYLARAY 679

Query: 761 YEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELE 820
           + A +  DCKK LL+A  ++P++  L ++  + MQ+ +   L+  +     V   V ELE
Sbjct: 680 FRAGKMMDCKKVLLKARRVSPNDTVLLYNIALVMQRLAMGILKDEKSNLKTVLGAVHELE 739

Query: 821 NAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEAA 880
            A R F++LS A +     FD  +       C  LL  A+ H   A R++++ +  +  A
Sbjct: 740 LAHRYFTYLSKAGDRMK--FDLNQAAVEARQCSDLLSQAQYHVARARRQDEEEKAIR--A 795

Query: 881 RQAALAEEARRKAEEQKKYLLEKRKLEDEQKRLRQQEEHF 920
           +QAA  +  R+K  E+K  + +++++E + + L ++ + F
Sbjct: 796 QQAAERDALRKKQLEEK--IAKEKQIEVKAQELLEKRQQF 833


>gi|393907253|gb|EFO21654.2| hypothetical protein LOAG_06832 [Loa loa]
          Length = 1183

 Score =  488 bits (1257), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 294/843 (34%), Positives = 461/843 (54%), Gaps = 59/843 (6%)

Query: 4   VYIPVQNSEEE--VRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQ 61
           V IP+++S E   + +  D LP D  ++L IL+ E A L+ W+ +A  Y+++G    F +
Sbjct: 34  VEIPLKDSTENEIIELDFDNLPDDGEEVLAILRGEHATLNFWVDLALAYYRRGNEADFVR 93

Query: 62  ILE-EGS--SPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYN 118
           ILE  GS  S E  EY+ D    ++  L+ L  YY      E  + +K+E    AT  Y 
Sbjct: 94  ILEMSGSEASLEYPEYHQD----QMRALDTLAAYYVIQSHKERNKDKKKEWQTKATLLYT 149

Query: 119 KASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRY 178
            A +I M++    +G+    L +G+++QA   F  VL    +N+PA LG+AC+ F R  Y
Sbjct: 150 TADKIIMYDTYHLLGRAYFCLLEGKIDQAEQQFNFVLNQVGENIPATLGKACIFFQRKEY 209

Query: 179 SDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA 238
             +L  YK  L+  P CP  +RLGIG C  KLG+L KAR AF+R L LD ENV ALVALA
Sbjct: 210 RKALNCYKSVLRKMPDCPADVRLGIGYCLAKLGRLDKARLAFKRVLDLDKENVSALVALA 269

Query: 239 VMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVT 298
           ++D+   E   IR+G+E + RA++I     + LN+LANHFF+  +   VE L   A  +T
Sbjct: 270 ILDMNTLEQEAIRRGVESLGRAYQIEQENPVVLNHLANHFFYKKELDRVEHLAWHAFQIT 329

Query: 299 NHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDF 358
           ++   ++ S Y LARS+H +G++EKA  +Y  S +       F+ PY+GLGQ+ +   D+
Sbjct: 330 DNEAMRAESCYQLARSFHQRGNFEKAFQHYYQSTQFATA--NFVLPYFGLGQMYIYREDY 387

Query: 359 RSALTNFEKVLEIYPDNCETLKALGHIYVQ---LGQIE------KAQELLRKAAKIDPRD 409
            +A+  FEKVL+  P N +TLK LG +Y       Q E      KA+E+ +K  ++ P D
Sbjct: 388 DNAIQCFEKVLKGCPTNYDTLKILGSLYAHSEPANQKERSERRKKAREIFKKVVEMCPDD 447

Query: 410 AQAFIDLGELLISSDTGAALDAFKTARTLLKKAGE-EVPIEVLNNIGVIHFEKGEFESAH 468
            +A IDL +L  + D   +LDA+  A T L +  E +VP E+ NN+G ++F  G++E A 
Sbjct: 448 VEALIDLAQLTENCDPQGSLDAYTKASTFLSQMIEVDVPPEITNNVGSLYFTIGQYEKAR 507

Query: 469 QSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVL 528
           + F++AL +      L     T   D +A  LQ                        TV 
Sbjct: 508 EYFEEALKE------LGEVVSTGQTDLAA--LQ-----------------------TTVT 536

Query: 529 FNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKV 588
           +NLAR LE +     A  LY+ IL +  +Y+D Y+RL  +A+ +  +  S     E + V
Sbjct: 537 YNLARSLEMLCMFDEAERLYKGILQEKPNYIDCYMRLGCLARDKGQIYESSVWFKEGMSV 596

Query: 589 NGKYPNALSMLGDLELKNDDWVKAKETFRAASDATD-GKDSYATLSLGNWNYFAALRNEK 647
           N  + +A S++G+L +   +W  A++ F       +   D Y+ ++LGN  +   L +  
Sbjct: 597 NQSHADAWSLIGNLHMSKFEWAPAQKKFEYILKLPEYHDDPYSFVALGNI-WLETLSSIH 655

Query: 648 RAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASG 707
           R  + +  + E+A  +Y++ +  H  N++AANG G +LA+KG    ++D+F QV+EA + 
Sbjct: 656 RKKEKDKDYRERALMMYSKALKVHPRNIWAANGIGCILAQKGAIQEARDIFAQVREATA- 714

Query: 708 SVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQ 767
                  DVW+N+AHVY  Q  +  A++MY NC++KF  + D  +LLYLAR HY+A ++ 
Sbjct: 715 ----DFSDVWVNIAHVYMEQKQYVAAIQMYDNCIKKFNRHNDVSLLLYLARAHYKAGKFT 770

Query: 768 DCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFS 827
           +C+  L +AI  AP N  L+F+    +QK +   L+  + + + V   V +L  A  +F 
Sbjct: 771 ECRHILEKAICEAPDNMMLKFNHAFVLQKLATQMLRDDKSSLEMVTGAVDDLRTAATIFE 830

Query: 828 HLS 830
           ++S
Sbjct: 831 YIS 833


>gi|256084411|ref|XP_002578423.1| tpr repeat nuclear phosphoprotein [Schistosoma mansoni]
 gi|353230098|emb|CCD76269.1| putative tpr repeat nuclear phosphoprotein [Schistosoma mansoni]
          Length = 1091

 Score =  487 bits (1253), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 298/892 (33%), Positives = 491/892 (55%), Gaps = 49/892 (5%)

Query: 4   VYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQIL 63
           + IP++  +E + +  DQLP D  ++L+IL  E+APL +W+ +A  Y+K+   + F ++L
Sbjct: 18  IEIPLRGGDEIIELDTDQLP-DGEEVLNILNQEKAPLQIWITVAIAYYKKKLYDDFEKVL 76

Query: 64  EEG--SSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKAS 121
           EE   ++ ++  Y+     + + +L+ L  YY      E  + +K +    AT+ +  A 
Sbjct: 77  EEAYLNAADLQPYHDS---DLVRLLDMLANYYGRKAYKEKSKDKKNQLIAQATRLFTSAD 133

Query: 122 RIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSD 180
           RIDM++    +G+    + +GE   QA S    VL     +VPA LG+AC+ FN+  Y +
Sbjct: 134 RIDMYDQKHLLGRAFFFIYEGENWSQADSQLNFVLNQGAPSVPAYLGKACIAFNKKEYRN 193

Query: 181 SLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVM 240
           +L FY++AL++ P+CP  +RLG+G C ++LG + KAR AF+RAL LDPE V ALV LAV+
Sbjct: 194 ALGFYRKALRLQPNCPATVRLGMGHCFFRLGNMEKARLAFKRALDLDPECVGALVGLAVL 253

Query: 241 DLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 300
           DL       I++G++K+ RA+ +     M LN+LA+HFF+  ++  V +L   A   T  
Sbjct: 254 DLNEKTQESIKQGVQKLSRAYNLDSTNPMVLNHLADHFFYKKEYAKVHRLALHAFYNTET 313

Query: 301 GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRS 360
              ++ S Y +AR++H + +Y+ A  YY  + +  +    FI P+YGLGQ+ L   D   
Sbjct: 314 ESIRAESCYQMARAFHIQENYDNAFQYYYLATQLASST--FILPFYGLGQMYLHRNDLEH 371

Query: 361 ALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKIDPRDAQAFIDLG 417
           A  +FE+VL+  P+N ETLK LG +Y Q  + +K   +++L ++  +  P D +A+I+  
Sbjct: 372 AAMSFERVLKDNPNNYETLKILGSLYAQSNKPDKRTQSKQLFKQVTESQPEDVEAWIEYA 431

Query: 418 ELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGD 477
           +LL  +D   ALDA+  A T+L+    E+  E+LNNI  +HF KGE++ + + F  +  D
Sbjct: 432 QLL-DNDINGALDAYSKALTILENIQLEIAPEILNNIAALHFTKGEYDKSSEFFTRSY-D 489

Query: 478 GIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQ 537
            I   L + + +       +S L   D   +H               +TV +N ARL E 
Sbjct: 490 RI---LEEQRNEENECGGDSSGLTNDDY--YHGLS------------ITVRYNQARLHEA 532

Query: 538 IHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALS 597
              +  A  +Y+ IL ++  Y++ YLRL  IA+ R  ++ +     EAL V+   P+A +
Sbjct: 533 QGRSDLAEEIYKSILLRHPSYIECYLRLGCIARDRGQIRDASIWFKEALDVDQDNPDAWT 592

Query: 598 MLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATH 656
           ++G L L  ++  +A++ F R         D++A + LGN  +   L +  +       H
Sbjct: 593 LIGLLHLGKNEVEQAQKKFDRIIRQPAYRADAFARICLGNI-WLTTLHHPIKDKDKRKRH 651

Query: 657 LEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDV 716
            ++A   Y  V+     N++AA+G G VLA KG  + ++D+F QV+EA +       PDV
Sbjct: 652 QDRALSFYKAVLCADPRNIWAAHGIGCVLAHKGFVNEARDVFAQVREATA-----DFPDV 706

Query: 717 WINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRA 776
           WIN+AH+Y  Q  +  A++MY+NC++KF    + ++L YLAR H++A Q ++CK  LL+A
Sbjct: 707 WINIAHIYVEQKQYTAAIQMYENCIKKFSRQNNTELLQYLARAHFKAGQLKECKTMLLKA 766

Query: 777 IHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASNL- 835
            H+ P +  L F+     ++ + + LQ    +   V   +A+L  A   F+HLS  + + 
Sbjct: 767 RHVKPWDPVLTFNLAFVQKRLAVTVLQDETSSFSSVCEAIADLNMARCTFNHLSKLNEVL 826

Query: 836 -HLHGFDEKKINTHVEYCKHLLDAAKIHREAAE-REEQQN--RQRQEAARQA 883
                 DE +I      C+ LL  AK H + A+ REEQ+   R+RQE  R+A
Sbjct: 827 NQAMAADEARI------CQDLLSQAKYHLDRAKSREEQERVVRKRQEEEREA 872


>gi|195126359|ref|XP_002007638.1| GI13051 [Drosophila mojavensis]
 gi|193919247|gb|EDW18114.1| GI13051 [Drosophila mojavensis]
          Length = 1205

 Score =  486 bits (1251), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 305/927 (32%), Positives = 504/927 (54%), Gaps = 61/927 (6%)

Query: 2   ACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQ 61
           AC+ IP+Q+++E + V  DQLP + S++  IL  E+APL +W+ +A  Y+KQ K + F  
Sbjct: 3   ACIEIPLQDTDEVIEVDPDQLP-ECSEVFSILLQERAPLHVWVNVALAYYKQKKTDDFIM 61

Query: 62  ILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKAS 121
           +LE        +Y  D + +++   + L  +Y      E  + +K E F+ AT  Y  A 
Sbjct: 62  LLEAARDKGTTDY-RDYKTDQMRAYDMLAAHYVQEAYREKSKDKKRELFMKATNLYTNAD 120

Query: 122 RIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSD 180
           +I M++ S  +G+    L +G+ ++QA + F  VL     N+P+LLG+AC+ FNR  Y  
Sbjct: 121 KIIMYDQSHLLGRAYFCLLEGDKMDQADAQFNFVLNQSPSNIPSLLGKACIAFNRKDYRG 180

Query: 181 SLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVM 240
           ++ FYK+AL+ +P+CP  +R+G+  C  K+G   KA+ AF+RALQLD + V AL+ LAV+
Sbjct: 181 AMAFYKKALRTNPNCPANVRIGMAHCFLKMGNAEKAKLAFERALQLDQQCVGALIGLAVL 240

Query: 241 DLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 300
            L   E    + G++ + +A+ I     M LN+LANHFFF   +  V  L   A   T +
Sbjct: 241 KLNQLEPESNKLGVQMLSKAYTIDNANPMVLNHLANHFFFKKDYQKVHHLALHAFHNTEN 300

Query: 301 GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRS 360
              ++ S Y LARS+H++ DY++A  YY  S +    P  F+ P+YGLGQ+ +  GD  +
Sbjct: 301 EAMRAESCYQLARSFHAQSDYDQAFQYYYQSTQIA--PANFVLPHYGLGQMYIYRGDTEN 358

Query: 361 ALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKIDPRDAQAFIDLG 417
           A   FEKVL+I P N ET+K LG +Y       K   A+  L+K  +  P D +A+I+L 
Sbjct: 359 AAQCFEKVLKIQPGNYETMKILGSLYAHSNSQTKRDMAKTHLKKVTEQFPEDIEAWIELA 418

Query: 418 ELLISSDTGAALDAFKTARTLLK-KAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALG 476
           ++L  +D  A+L+A+ TA ++L+ KA  E+P E+ NN+  +H+  G  + A  + + AL 
Sbjct: 419 QILEQNDLQASLNAYGTASSILRDKAKYEIPAEIQNNVASLHYRLGNLKLAKDTLESALK 478

Query: 477 DGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLE 536
                             AS+ M   KD++ +   +            VT+ +NLARL E
Sbjct: 479 -----------------HASSEME--KDVKYYESIQ------------VTMKYNLARLNE 507

Query: 537 QIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNAL 596
            +     A  LY+ IL ++ +Y+D YLRL  +A+ +  + ++ +   +AL +N   P+A 
Sbjct: 508 AMSCFDVADKLYKEILKEHPNYIDCYLRLGCMARDKGLIFVASDFFKDALNINNDNPDAR 567

Query: 597 SMLGDLELKNDDWVKAKETFRAA-SDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEAT 655
           S+LG+L L    +   ++ F     +     D+Y+ ++LGN++    L    R  + E  
Sbjct: 568 SLLGNLHLAKMQFALGQKNFETILKNPATASDAYSLIALGNFS-LQTLHQPSRDKEKERK 626

Query: 656 HLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPD 715
           H EKA  ++ +V+     N++A NG G VLA KG    ++D+F QV+EA +        D
Sbjct: 627 HQEKALAIFKQVLRTDPRNIWATNGIGAVLAHKGCVIEARDIFAQVREATA-----DFCD 681

Query: 716 VWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLR 775
           VW+N+AH+Y  Q  +  A++MY+NC++KF+ + + +++ YLAR +  A +  + K  LL+
Sbjct: 682 VWLNIAHIYVEQKQYISAIQMYENCMKKFFKHNNVEVMQYLARAYLRANKLVEAKAVLLK 741

Query: 776 AIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASNL 835
           A  +AP +  L F+  V + + + + L+  + T + V   V ELE A + F +LS     
Sbjct: 742 ARRVAPQDTVLLFNIAVVLSRLAMAILKDEKSTLEVVLQAVHELELAHKYFQYLS----- 796

Query: 836 HLHGFDEKKINTHV-----EYCKHLLDAAKIHREAAEREEQQNRQRQEAARQAALAEEAR 890
            +HG D+ + N  V       C+ LL  A+ H   A R ++++R  +    +   A   +
Sbjct: 797 -VHG-DKTRFNIEVAGVEANTCQDLLSQAQYHVGRARRIDEEDRTLRRRQEEEREA--FK 852

Query: 891 RKAEEQKKYLLEKRKLEDEQKRLRQQE 917
           +K  EQ+K   E+ K+  EQ   ++QE
Sbjct: 853 QKMLEQRKRREEEAKMSREQLLAKRQE 879


>gi|195376509|ref|XP_002047039.1| GJ12147 [Drosophila virilis]
 gi|194154197|gb|EDW69381.1| GJ12147 [Drosophila virilis]
          Length = 1187

 Score =  484 bits (1247), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 305/926 (32%), Positives = 502/926 (54%), Gaps = 61/926 (6%)

Query: 3   CVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQI 62
           C+ IP+Q+++E + V  DQLP + S++  IL  E+APL +W+ +A  Y+KQ K + F  +
Sbjct: 4   CIEIPLQDTDEVIEVDPDQLP-ECSEVFSILLQERAPLHVWVNVALAYYKQKKTDDFIML 62

Query: 63  LEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASR 122
           LE        +Y  D + +++   + L  +Y      E  + +K E F+ AT  Y  A +
Sbjct: 63  LEAAREKGTLDY-RDFKTDQMRAFDMLAAHYVQEAYREKSKDKKRELFMKATNLYTNADK 121

Query: 123 IDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDS 181
           I M++ S  +G+    L +G+ ++QA + F  VL     N+P+LLG+AC+ FNR  Y  +
Sbjct: 122 IIMYDQSHLLGRAYFCLLEGDKMDQADAQFNFVLNQSPSNIPSLLGKACIAFNRKDYRGA 181

Query: 182 LEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMD 241
           + FYK+AL+ +P+CP  +R+G+  C  K+G   KA+ AF+RALQLD + V AL+ LAV+ 
Sbjct: 182 MAFYKKALRTNPNCPANVRIGMAHCFLKMGNAEKAKLAFERALQLDQQCVGALIGLAVLK 241

Query: 242 LQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG 301
           L   E    + G++ + +A+ I     M LN+LANHFFF   +  V  L   A   T + 
Sbjct: 242 LNQLEPESNKLGVQMLSKAYTIDNANPMVLNHLANHFFFKKDYQKVHHLALHAFHNTENE 301

Query: 302 PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSA 361
             ++ S Y LARS+H++ DY++A  YY  S +    P  F+ P+YGLGQ+ +  GD  +A
Sbjct: 302 AMRAESCYQLARSFHAQSDYDQAFQYYYQSTQIA--PANFVLPHYGLGQMYIYRGDTENA 359

Query: 362 LTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKIDPRDAQAFIDLGE 418
              FEKVL+I P N ET+K LG +Y       K   A+  L+K  +  P D +A+I+L +
Sbjct: 360 AQCFEKVLKIQPGNYETMKILGSLYAHSNSQTKRDMAKTHLKKVTEQFPEDIEAWIELAQ 419

Query: 419 LLISSDTGAALDAFKTARTLLK-KAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGD 477
           +L  +D  A+L+A+ TA ++L+ KA  E+P E+ NN+  +H+  G  + A  + + AL  
Sbjct: 420 ILEQNDLQASLNAYGTASSILRDKAKYEIPAEIQNNVASLHYRLGNLKLAKDTLESALK- 478

Query: 478 GIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQ 537
                            AS+ M   KD++ +   +            VT+ +NLARL E 
Sbjct: 479 ----------------HASSEM--DKDVKYYESIQ------------VTMKYNLARLNEA 508

Query: 538 IHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALS 597
           +     A  LY+ IL ++ +Y+D YLRL  +A+ +  + ++ +   +AL +N   P+A S
Sbjct: 509 MSSFDVADKLYKEILKEHPNYIDCYLRLGCMARDKGLIFVASDFFKDALNINNDNPDARS 568

Query: 598 MLGDLELKNDDWVKAKETFRAA-SDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATH 656
           +LG+L L    +   ++ F     +     D+Y+ ++LGN++    L    R  + E  H
Sbjct: 569 LLGNLHLAKMQFALGQKNFETILKNPATASDAYSLIALGNFS-LQTLHQPSRDKEKERKH 627

Query: 657 LEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDV 716
            EKA  ++ +V+     N++A NG G VLA KG    ++D+F QV+EA +        DV
Sbjct: 628 QEKALAIFKQVLRTDPRNIWATNGIGAVLAHKGCVIEARDIFAQVREATA-----DFCDV 682

Query: 717 WINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRA 776
           W+N+AHVY  Q  +  A++MY+NC++KFY + + +++ YLAR +  A +  + K  LL+A
Sbjct: 683 WLNIAHVYVEQKQYISAIQMYENCMKKFYKHNNVEVMQYLARAYLRANKLVEAKAVLLKA 742

Query: 777 IHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLH 836
             +AP +  L F+  V + + + + L+  + T + V   V ELE A + F +LS      
Sbjct: 743 RRVAPQDTVLLFNIAVVLSRLAMAILKDEKSTLEVVLQAVHELELAHKYFQYLS------ 796

Query: 837 LHGFDEKKINTHV-----EYCKHLLDAAKIHREAAEREEQQNRQRQEAARQAALAEEARR 891
           +HG D+ + N  V       C+ LL  A+ H   A R ++++R  +    +   A   + 
Sbjct: 797 VHG-DKTRFNIEVAGVEANTCQDLLSQAQYHVGRARRIDEEDRTLRRRQEEEREA--FKL 853

Query: 892 KAEEQKKYLLEKRKLEDEQKRLRQQE 917
           K +EQ+K   E+ K   +Q   ++QE
Sbjct: 854 KMQEQRKRREEEAKTSRDQLLAKRQE 879


>gi|402588814|gb|EJW82747.1| TPR Domain containing protein, partial [Wuchereria bancrofti]
          Length = 1028

 Score =  484 bits (1245), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 291/832 (34%), Positives = 452/832 (54%), Gaps = 57/832 (6%)

Query: 13  EEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQILE-EGS--SP 69
           E + +  D LP D  ++L IL+ E A L+ W+ +A  Y+++G    F +ILE  GS  S 
Sbjct: 1   EIIELDFDNLPDDGEEVLAILRGEHATLNFWVDLALAYYRRGNEADFVRILEMSGSEASL 60

Query: 70  EIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPS 129
           E  EY+ D    ++  L+ L  YY      E  + +K+E    AT  Y  A +I M++  
Sbjct: 61  EYPEYHQD----QMRALDTLAAYYVIQSHKERNKDKKKEWQTKATLLYTTADKIIMYDTY 116

Query: 130 TWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRAL 189
             +G+    L +G+++QA   F  VL    +N+PA LG+AC+ F R  Y  +L  YK  L
Sbjct: 117 HLLGRAYFCLLEGKIDQAEQQFNFVLNQVGENIPATLGKACIFFQRKEYRKALNCYKSVL 176

Query: 190 QVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAG 249
           +  P CP  +RLGIG C  KLG+L KAR AF+R L LD ENV ALVALA++D+   E   
Sbjct: 177 RKMPDCPADVRLGIGYCLAKLGRLDKARLAFRRVLDLDKENVSALVALAILDMNTLEQEA 236

Query: 250 IRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYY 309
           IR+G+E   RA++I     + LN+LANHFF+  +   VE L   A  +T++   ++ S Y
Sbjct: 237 IRRGVESFGRAYQIEQENPVVLNHLANHFFYKKELDRVEHLAWHAFQITDNEAMRAESCY 296

Query: 310 NLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVL 369
            LARS+H +G++EKA  +Y  S +       F+ PY+GLGQ+ +   D+ +A+  FEKVL
Sbjct: 297 QLARSFHQRGNFEKAFQHYYQSTQFATA--NFVLPYFGLGQMYIYREDYDNAIQCFEKVL 354

Query: 370 EIYPDNCETLKALGHIYVQ---LGQIE------KAQELLRKAAKIDPRDAQAFIDLGELL 420
           +  P N +TLK LG +Y       Q E      KA+E+ +K  ++ P D +A IDL +L 
Sbjct: 355 KACPTNYDTLKILGSLYAHSEPANQKERSERRKKAREIFKKVVEMCPDDVEALIDLAQLT 414

Query: 421 ISSDTGAALDAFKTARTLLKKAGE-EVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGI 479
            + D   +LDA+  A T L +  E +VP E+ NN+G ++F  G++E A   F++AL +  
Sbjct: 415 ENCDPQGSLDAYTKASTFLSQMIEVDVPPEITNNVGSLYFTIGQYEKARVYFEEALKE-- 472

Query: 480 WLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIH 539
               L     T   D +A  LQ                        TV +NLAR LE + 
Sbjct: 473 ----LGEVVSTGQTDLAA--LQ-----------------------TTVTYNLARSLEMLC 503

Query: 540 DTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSML 599
               A  LY+ IL +  +Y+D Y+RL  +A+ +  +  S     E + VN  + +A S++
Sbjct: 504 MFDEAERLYKGILQEKPNYIDCYMRLGCLARDKGQIYESSVWFKEGMSVNQSHADAWSLI 563

Query: 600 GDLELKNDDWVKAKETFRAASDATD-GKDSYATLSLGNWNYFAALRNEKRAPKLEATHLE 658
           G+L +   +W  A++ F       +   D Y+ ++LGN  +   L +  R  + +  + E
Sbjct: 564 GNLHMSKFEWAPAQKKFEYILKLPEYHDDPYSFVALGNI-WLETLSSIHRKKEKDKDYRE 622

Query: 659 KAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWI 718
           +A  +Y++ +  H  N++AANG G +LA+KG    ++D+F QV+EA +        DVWI
Sbjct: 623 RALMMYSKALKVHPKNIWAANGIGCILAQKGAIQEARDIFAQVREATA-----DFSDVWI 677

Query: 719 NLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIH 778
           N+AHVY  Q  +  A++MY NC++KF  + D  +LLYLAR HY+A ++ +C+  L +AI 
Sbjct: 678 NIAHVYMEQKQYVAAIQMYDNCIKKFNRHNDVSLLLYLARAHYKAGKFSECRHILEKAIC 737

Query: 779 LAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLS 830
            AP N  L+F+    +QK +   L+  + + + V   V +L  A  +F ++S
Sbjct: 738 EAPDNMMLKFNHAFVLQKLATQMLRDDKSSLEMVTGAVDDLRTAATIFEYIS 789


>gi|312080004|ref|XP_003142416.1| hypothetical protein LOAG_06832 [Loa loa]
          Length = 1397

 Score =  483 bits (1244), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 290/832 (34%), Positives = 454/832 (54%), Gaps = 57/832 (6%)

Query: 13   EEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQILE-EGS--SP 69
            E + +  D LP D  ++L IL+ E A L+ W+ +A  Y+++G    F +ILE  GS  S 
Sbjct: 259  EIIELDFDNLPDDGEEVLAILRGEHATLNFWVDLALAYYRRGNEADFVRILEMSGSEASL 318

Query: 70   EIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPS 129
            E  EY+ D    ++  L+ L  YY      E  + +K+E    AT  Y  A +I M++  
Sbjct: 319  EYPEYHQD----QMRALDTLAAYYVIQSHKERNKDKKKEWQTKATLLYTTADKIIMYDTY 374

Query: 130  TWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRAL 189
              +G+    L +G+++QA   F  VL    +N+PA LG+AC+ F R  Y  +L  YK  L
Sbjct: 375  HLLGRAYFCLLEGKIDQAEQQFNFVLNQVGENIPATLGKACIFFQRKEYRKALNCYKSVL 434

Query: 190  QVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAG 249
            +  P CP  +RLGIG C  KLG+L KAR AF+R L LD ENV ALVALA++D+   E   
Sbjct: 435  RKMPDCPADVRLGIGYCLAKLGRLDKARLAFKRVLDLDKENVSALVALAILDMNTLEQEA 494

Query: 250  IRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYY 309
            IR+G+E + RA++I     + LN+LANHFF+  +   VE L   A  +T++   ++ S Y
Sbjct: 495  IRRGVESLGRAYQIEQENPVVLNHLANHFFYKKELDRVEHLAWHAFQITDNEAMRAESCY 554

Query: 310  NLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVL 369
             LARS+H +G++EKA  +Y  S +       F+ PY+GLGQ+ +   D+ +A+  FEKVL
Sbjct: 555  QLARSFHQRGNFEKAFQHYYQSTQFATA--NFVLPYFGLGQMYIYREDYDNAIQCFEKVL 612

Query: 370  EIYPDNCETLKALGHIYVQ---LGQIE------KAQELLRKAAKIDPRDAQAFIDLGELL 420
            +  P N +TLK LG +Y       Q E      KA+E+ +K  ++ P D +A IDL +L 
Sbjct: 613  KGCPTNYDTLKILGSLYAHSEPANQKERSERRKKAREIFKKVVEMCPDDVEALIDLAQLT 672

Query: 421  ISSDTGAALDAFKTARTLLKKAGE-EVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGI 479
             + D   +LDA+  A T L +  E +VP E+ NN+G ++F  G++E A + F++AL +  
Sbjct: 673  ENCDPQGSLDAYTKASTFLSQMIEVDVPPEITNNVGSLYFTIGQYEKAREYFEEALKE-- 730

Query: 480  WLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIH 539
                L     T   D +A  LQ                        TV +NLAR LE + 
Sbjct: 731  ----LGEVVSTGQTDLAA--LQ-----------------------TTVTYNLARSLEMLC 761

Query: 540  DTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSML 599
                A  LY+ IL +  +Y+D Y+RL  +A+ +  +  S     E + VN  + +A S++
Sbjct: 762  MFDEAERLYKGILQEKPNYIDCYMRLGCLARDKGQIYESSVWFKEGMSVNQSHADAWSLI 821

Query: 600  GDLELKNDDWVKAKETFRAASDATD-GKDSYATLSLGNWNYFAALRNEKRAPKLEATHLE 658
            G+L +   +W  A++ F       +   D Y+ ++LGN  +   L +  R  + +  + E
Sbjct: 822  GNLHMSKFEWAPAQKKFEYILKLPEYHDDPYSFVALGNI-WLETLSSIHRKKEKDKDYRE 880

Query: 659  KAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWI 718
            +A  +Y++ +  H  N++AANG G +LA+KG    ++D+F QV+EA +        DVW+
Sbjct: 881  RALMMYSKALKVHPRNIWAANGIGCILAQKGAIQEARDIFAQVREATA-----DFSDVWV 935

Query: 719  NLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIH 778
            N+AHVY  Q  +  A++MY NC++KF  + D  +LLYLAR HY+A ++ +C+  L +AI 
Sbjct: 936  NIAHVYMEQKQYVAAIQMYDNCIKKFNRHNDVSLLLYLARAHYKAGKFTECRHILEKAIC 995

Query: 779  LAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLS 830
             AP N  L+F+    +QK +   L+  + + + V   V +L  A  +F ++S
Sbjct: 996  EAPDNMMLKFNHAFVLQKLATQMLRDDKSSLEMVTGAVDDLRTAATIFEYIS 1047


>gi|170062990|ref|XP_001866910.1| TPR repeat-containing protein [Culex quinquefasciatus]
 gi|167880758|gb|EDS44141.1| TPR repeat-containing protein [Culex quinquefasciatus]
          Length = 1128

 Score =  481 bits (1237), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 308/942 (32%), Positives = 510/942 (54%), Gaps = 68/942 (7%)

Query: 2   ACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQ 61
           A + IP+++++E + +  +QLP D  ++L IL+ E++ L+ W+ +A  Y+KQ K E F +
Sbjct: 3   APIEIPLRDTDEVIELDPEQLP-DGEEVLGILRQERSQLNTWVTVALAYYKQNKTEDFIK 61

Query: 62  ILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKAS 121
           IL+ GS  + +  Y D   +++   + L  YY      E  + +K E F+ AT  Y  A 
Sbjct: 62  ILD-GSRVDANISYRDFEKDQMRAYDMLAAYYVQEANREKSKDKKRELFMKATHLYTTAD 120

Query: 122 RIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSD 180
           +I M++ +  +G+    L +G+ +EQA + F  VL     N+P+LLG+AC+ FN+  Y  
Sbjct: 121 KIIMYDQNHLLGRAYFCLLEGDKMEQADAQFNFVLNQSPSNIPSLLGKACIAFNKKDYRG 180

Query: 181 SLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVM 240
           +L FYK+AL+ +P+CP A+RLG+G C  K+    KA+ AFQRAL LDP  V ALV LA++
Sbjct: 181 ALAFYKKALRTNPNCPAAVRLGMGHCFLKMNNQEKAKLAFQRALDLDPACVGALVGLAIL 240

Query: 241 DLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 300
            L  +E    R G++ + +A+ I     M LN+LANHFFF   +  V+ L   A   T +
Sbjct: 241 KLNLHEPESNRLGVQMLSKAYTIDSTNPMVLNHLANHFFFKKDYQKVQHLALHAFHNTEN 300

Query: 301 GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRS 360
              ++ S Y LAR++H + DY++A  YY  S +    P  F+ P++GLGQ+ +  GD  +
Sbjct: 301 EAMRAESCYQLARAFHVQRDYDQAFQYYYQSTQFA--PVNFVLPHFGLGQMYIYRGDSEN 358

Query: 361 ALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKIDPRDAQAFIDLG 417
           A   FEKVL+  P N ET+K LG +Y       K   A+  L+K  +  P D +A+I+L 
Sbjct: 359 AAQCFEKVLKAQPGNYETMKILGSLYASSSSQSKRDIAKNHLKKVTEQFPDDVEAWIELA 418

Query: 418 ELLISSDTGAALDAFKTARTLLK-KAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALG 476
           ++L  +D   +L A+ TA ++LK K   ++P E+LNN+  +H+  G  E A +       
Sbjct: 419 QILEQNDLQGSLQAYATATSILKDKVKADIPPEILNNVAALHYRLGNMEKAMEK------ 472

Query: 477 DGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLE 536
                  LD+      ++A        D Q +                VT+ +N ARL E
Sbjct: 473 -------LDTAIDRAKVEAQ------HDAQYYDSIS------------VTMTYNQARLNE 507

Query: 537 QIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNAL 596
            +     A  LY+ IL ++ +Y+D YLRL  +A+ +  + ++ +   +ALK+N + P+  
Sbjct: 508 AMASFDRADKLYKDILKEHPNYIDCYLRLGCMARDKGLIFVASDFFKDALKINMENPDTR 567

Query: 597 SMLGDLELKNDDWVKAKETFRAA-SDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEAT 655
           S+LG+L L    W   ++ F     +     D+Y+ ++LGN+ +  +L    +  + E  
Sbjct: 568 SLLGNLHLAKMQWTLGQKNFETILKNPATSSDAYSLIALGNF-WLQSLHQPSKDKEKEKK 626

Query: 656 HLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPD 715
           H EKA  +Y +V+     N++AANG G VLA KG    ++D+F QV+EA +        D
Sbjct: 627 HQEKALAIYKQVLRNDPKNIWAANGIGAVLAHKGCIIEARDIFAQVREATA-----DFCD 681

Query: 716 VWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLR 775
           VW+N+AH+Y  Q  +  A++MY+NCL+KFY + +  ++ YLAR ++ A + ++ K +LL+
Sbjct: 682 VWLNIAHIYVEQKQYISAIQMYENCLKKFYKHNNVDVMQYLARAYFRAGKLKEAKMTLLK 741

Query: 776 AIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASNL 835
           A  +AP +  L F+  + +Q+ +   L+  +     V   V EL  A + F++LS     
Sbjct: 742 ARRVAPQDTVLLFNIALVLQRLAMMVLRDEKSVLTVVLQAVHELGLAHKYFNYLS----- 796

Query: 836 HLHGFDEKKIN-----THVEYCKHLLDAAKIHREAAER---EEQQNRQRQEAARQAALAE 887
            +HG D+ + N          C+ LL  A+ H   A +   EE+  RQ+QE  R     E
Sbjct: 797 -VHG-DKTRYNIALAAAEASQCQDLLQQAQYHVSRARKIDEEERSLRQKQEQDR-----E 849

Query: 888 EARRKAEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVKARIFY 929
           E +R+  E++  + E R+   E+  L ++ E+ ++ K  +F+
Sbjct: 850 EFKRRQREERSRMEEMRRKAHEE-MLAKRIEYKEKTKNALFF 890


>gi|157129462|ref|XP_001655398.1| tpr repeat nuclear phosphoprotein [Aedes aegypti]
 gi|108872219|gb|EAT36444.1| AAEL011480-PA [Aedes aegypti]
          Length = 1120

 Score =  480 bits (1236), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 309/945 (32%), Positives = 511/945 (54%), Gaps = 68/945 (7%)

Query: 2   ACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQ 61
           A + IP+++++E + +  +QLP +  ++L IL+ E++ L+ W+ +A  Y+KQ K + F +
Sbjct: 3   APIEIPLRDTDEVIELDPEQLP-EGEEVLGILRQERSQLNTWVTVALAYYKQNKTDDFIK 61

Query: 62  ILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKAS 121
           ILE  S  + +  Y D   +++   + L  YY      E  + +K E F+ AT  Y  A 
Sbjct: 62  ILE-ASRIDANISYRDFEKDQMRAYDMLAAYYVQEANREKSKDKKRELFMKATHLYTTAD 120

Query: 122 RIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSD 180
           +I M++ +  +G+    L +G+ +EQA + F  VL     N+P+LLG+AC+ FN+  Y  
Sbjct: 121 KIIMYDQNHLLGRAYFCLLEGDKMEQADAQFNFVLNQSPSNIPSLLGKACIAFNKKDYRG 180

Query: 181 SLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVM 240
           +L FYK+AL+ +P+CP A+RLG+G C  KL    KA+ AFQRAL LDP+ V ALV LA++
Sbjct: 181 ALAFYKKALRTNPNCPAAVRLGMGHCFLKLNNPEKAKLAFQRALDLDPQCVGALVGLAIL 240

Query: 241 DLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 300
            L  +E    R G++ + +A+ I     M LN+LANHFFF   +  V+ L   A   T +
Sbjct: 241 KLNLHEPESNRLGVQMLSKAYTIDSTNPMVLNHLANHFFFKKDYQKVQHLALHAFHNTEN 300

Query: 301 GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRS 360
              ++ S Y LAR++H + DY++A  YY  S +    P  F+ P++GLGQ+ +  GD  +
Sbjct: 301 EAMRAESCYQLARAFHVQRDYDQAFQYYYQSTQFA--PANFVLPHFGLGQMYIYRGDSEN 358

Query: 361 ALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKIDPRDAQAFIDLG 417
           A   FEKVL+  P N ET+K LG +Y       K   A+  L+K  +  P D +A+I+L 
Sbjct: 359 AAQCFEKVLKAQPGNYETMKILGSLYASSSSQSKRDIAKNHLKKVTEQFPDDVEAWIELA 418

Query: 418 ELLISSDTGAALDAFKTARTLLK-KAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALG 476
           ++L  +D   +L A+ TA  +L  K   ++P E+LNN+  +H+  G    A         
Sbjct: 419 QILEQNDLQGSLQAYATATNILTDKVKADIPPEILNNVAALHYRLGNLNEA--------- 469

Query: 477 DGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLE 536
               +T L+   +   I+A        D Q +                VT+ +NLARL E
Sbjct: 470 ----MTKLEMAIERAKIEAQ------HDSQYYDSIS------------VTMTYNLARLNE 507

Query: 537 QIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNAL 596
            +     A  LY+ IL ++ +Y+D YLRL  +A+ +  + ++ +   +ALK+N + P+  
Sbjct: 508 AMASFDKADKLYKDILKEHPNYIDCYLRLGCMARDKGLIFVASDFFKDALKINMENPDTR 567

Query: 597 SMLGDLELKNDDWVKAKETFRAA-SDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEAT 655
           S+LG+L L    W   ++ F     +     D+Y+ ++LGN+ +  +L    +  + E  
Sbjct: 568 SLLGNLHLAKMQWTLGQKNFETILKNPATSSDAYSLIALGNF-WLQSLHQPSKDKEKEKK 626

Query: 656 HLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPD 715
           H EKA  +Y +V+     N++AANG G VLA KG    ++D+F QV+EA +        D
Sbjct: 627 HQEKALAIYKQVLRNDPKNIWAANGIGAVLAHKGCIIEARDIFAQVREATA-----DFCD 681

Query: 716 VWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLR 775
           VW+N+AH+Y  Q  +  A++MY+NCL+KFY + +  ++ YLAR ++ A + ++ K +LL+
Sbjct: 682 VWLNIAHIYVEQKQYISAIQMYENCLKKFYKHNNVDVMQYLARAYFRAGKLKEAKMTLLK 741

Query: 776 AIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASNL 835
           A  +AP +  L F+  + +Q+ +   L+  +     V   V EL  A + F++LS     
Sbjct: 742 ARRVAPQDTVLLFNIALVLQRLAMMVLKDEKSVLSVVLQAVHELGLAHKYFNYLS----- 796

Query: 836 HLHGFDEKKIN-----THVEYCKHLLDAAKIHREAAER---EEQQNRQRQEAARQAALAE 887
            +HG D+ + N     +    C+ LL  A+ H   A +   EE+  RQ+QE  R     E
Sbjct: 797 -IHG-DKTRYNITLAASEASQCQDLLQQAQYHVSRARKIDEEERSLRQKQEQER-----E 849

Query: 888 EARRKAEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVKARIFYICS 932
           E +R+  E++  + E R+   E    R+Q E+ ++ K  +F++ S
Sbjct: 850 EFKRRQREERVRMEEMRRKAHEDMMARRQ-EYKEKTKNALFFVES 893


>gi|31242247|ref|XP_321554.1| AGAP001559-PA [Anopheles gambiae str. PEST]
 gi|19572379|emb|CAD27925.1| putative TPR-containing phosphoprotein [Anopheles gambiae]
 gi|21288614|gb|EAA00907.1| AGAP001559-PA [Anopheles gambiae str. PEST]
          Length = 1200

 Score =  477 bits (1228), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 306/942 (32%), Positives = 518/942 (54%), Gaps = 68/942 (7%)

Query: 2   ACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQ 61
           A + IP+++++E + +  +QLP +  ++L IL+ E++ L+ W+ +A  Y+KQ K + F +
Sbjct: 3   APIEIPLRDTDEVIELDPEQLP-EGEEVLGILRQERSQLNTWVTVALAYYKQKKTDDFIK 61

Query: 62  ILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKAS 121
           ILE  S  + + +Y D   +++   + L  YY      E  + +K + F+ AT  Y  A 
Sbjct: 62  ILE-ASRVDANIHYRDFEKDQMRAYDMLAAYYVQEANREKSKDKKRDLFLKATLLYTTAD 120

Query: 122 RIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSD 180
           +I M++ +  +G+    L +G+ ++QA + F  VL     N+P+LLG+AC+ FN+  Y  
Sbjct: 121 KIIMYDQNHLLGRAYFCLLEGDKMDQADAQFNFVLNQSPSNIPSLLGKACIAFNKKDYRG 180

Query: 181 SLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVM 240
           +L FYK+AL+ +P+CP A+RLG+G C  KL    KA+ AFQRAL L+P+ V ALV LA++
Sbjct: 181 ALAFYKKALRTNPNCPAAVRLGMGHCFLKLSNPDKAKLAFQRALDLEPQCVGALVGLAIL 240

Query: 241 DLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 300
            L  +E    R G++ + +A+ I     M LN+LANHFFF   +  V+ L   A   T +
Sbjct: 241 KLNLHEPESNRMGVQMLSKAYTIDSTNPMVLNHLANHFFFKKDYQKVQHLALHAFHNTEN 300

Query: 301 GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRS 360
              ++ S Y LAR++H + DY++A  YY  S +    P  F+ P++GLGQ+ +  GD  +
Sbjct: 301 EAMRAESCYQLARAFHVQRDYDQAFQYYYQSTQ--FAPVNFVLPHFGLGQMYIYRGDSEN 358

Query: 361 ALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKIDPRDAQAFIDLG 417
           A   FEKVL+  P N ET+K LG +Y       K   A+  L+K  +  P D +A+I+L 
Sbjct: 359 AAQCFEKVLKAQPGNYETMKILGSLYATSSSQSKRDIAKNHLKKVTEQFPDDVEAWIELA 418

Query: 418 ELLISSDTGAALDAFKTARTLL-KKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALG 476
           ++L  +D   +L A+ TA ++L +K   ++P E+LNN+  +H+  G  + A         
Sbjct: 419 QILEQNDLQGSLQAYGTATSILTEKVNADIPPEILNNVAALHYRLGNLDEA--------- 469

Query: 477 DGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLE 536
               ++ L+   +   I+A        D Q +                V++ +NLARL E
Sbjct: 470 ----MSKLEQAIERAKIEAQ------HDAQYYDSIS------------VSMTYNLARLYE 507

Query: 537 QIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNAL 596
            +     A  LY+ IL ++ +Y+D YLRL  +A+ +  + ++ +   +ALK+N + P+  
Sbjct: 508 AMAVFDKADKLYKDILKEHPNYIDCYLRLGCMARDKGLIFVASDFFKDALKINMENPDTR 567

Query: 597 SMLGDLELKNDDWVKAKETFRAA-SDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEAT 655
           S+LG+L L    W   ++ F     +     D+Y+ ++LGN+ +  +L    R  + E  
Sbjct: 568 SLLGNLHLAKMQWTLGQKNFETILKNPATSSDAYSLIALGNF-WLQSLHQPNRDKEKEKK 626

Query: 656 HLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPD 715
           H EKA  +Y +V+     N++AANG G VLA KG    ++D+F QV+EA +        D
Sbjct: 627 HQEKALAIYKQVLRNDPKNIWAANGIGAVLAHKGCIIEARDIFAQVREATA-----DFCD 681

Query: 716 VWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLR 775
           VWIN+AH+Y  Q  +  A++MY+NCL+KFY + + +++ YLAR ++ A + ++ K +LL+
Sbjct: 682 VWINIAHIYVEQKQYISAIQMYENCLKKFYRHNNVEVMQYLARAYFRAGKLKEAKMTLLK 741

Query: 776 AIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASNL 835
           A  +AP +  L F+  + +Q+ +   L+  +     V   V EL  A + F++LS     
Sbjct: 742 ARRVAPQDTVLLFNIALVLQRLATFVLRDEKSVLSVVLQAVHELGLAHKYFTYLS----- 796

Query: 836 HLHGFDEKKIN-----THVEYCKHLLDAAKIHREAAER---EEQQNRQRQEAARQAALAE 887
            +HG D+ + N     T    C+ LL  A+ H   A +   EE+  RQ+QE  R+    E
Sbjct: 797 -VHG-DKTRYNIALAETEANQCQDLLQQAQYHVSRARKIDEEERSLRQKQELERE----E 850

Query: 888 EARRKAEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVKARIFY 929
             RR+AE++++    +RK  +E   L +++E+ ++ K  +F+
Sbjct: 851 FKRRQAEDRRRMEEMRRKAHEEM--LLKRQEYKEKTKNALFF 890


>gi|358334314|dbj|GAA52741.1| RNA polymerase-associated protein CTR9 homolog [Clonorchis
           sinensis]
          Length = 1257

 Score =  476 bits (1224), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 300/916 (32%), Positives = 494/916 (53%), Gaps = 61/916 (6%)

Query: 4   VYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQIL 63
           + IP++  +E + +  DQLP D  ++L+IL  E+APL +W+ +A  Y+K+   + F ++L
Sbjct: 38  IEIPLRGGDEVIELDTDQLP-DGEEVLNILNQEKAPLPIWINVAVAYYKKRLYDDFEKVL 96

Query: 64  EEG--SSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKAS 121
           EE   ++ ++  Y      + + +L+ L  YY      E  + +K +    AT+ +  A 
Sbjct: 97  EEAYRNAADLQPYQEG---DLVRLLDMLANYYGRKAYKEKTKEKKNQLIAHATRLFTSAD 153

Query: 122 RIDMHEPSTWVGKGQLLLAKGEV-EQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSD 180
           RIDM++    +G+    + +GE   QA S    VL     +VPA LG+AC+ FN+  Y +
Sbjct: 154 RIDMYDQKHLLGRAFFFIYEGENWSQADSQLNFVLNQGAPSVPAYLGKACIAFNKKEYRN 213

Query: 181 SLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVM 240
           +L FY++AL++ P+CP ++RLG+G C +KLG + KAR AFQRAL LDP+ V ALV LA++
Sbjct: 214 ALGFYRKALRLQPNCPASVRLGMGHCFFKLGNMEKARLAFQRALDLDPDCVGALVGLAIL 273

Query: 241 DLQANEAA-----------GIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQ 289
           DL     A            I++G++++ RA+ + P   M LN+LA+HFF+  ++  V++
Sbjct: 274 DLNEKTQAIILFRSCTHQESIKQGVQRLSRAYNLDPTNPMVLNHLADHFFYKKEYDKVQR 333

Query: 290 LTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLG 349
           L   A   T     ++ S Y +AR++H + +Y+ A  YY  + +  +    FI P+YGLG
Sbjct: 334 LALHAFYNTETEAMRAESCYQMARAFHMQENYDNAFQYYYLATQLASS--NFILPFYGLG 391

Query: 350 QVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKID 406
           Q+ L   D   A  +FE+VL+ +P N ETLK LG +Y Q  + +K   A++L ++  +  
Sbjct: 392 QMYLHRNDLEHAAVSFERVLKDHPTNYETLKILGSLYSQSNKPDKRAQAKQLFKQVTESQ 451

Query: 407 PRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFES 466
           P D +A+I+  +LL  +DT  ALDA+  A T+L+    +V  E+LNNI  ++  K +   
Sbjct: 452 PEDVEAWIEYAQLL-ENDTNGALDAYLKALTILENIQLDVAPEILNNIACLYHMKNDHTQ 510

Query: 467 AHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVT 526
           A   F  AL     +       +    D         D + +H               +T
Sbjct: 511 AMNFFTRALD---RIQEEQQSEENERADGGVG----HDDEYYHGL------------NIT 551

Query: 527 VLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEAL 586
           V +N ARL E       A  +Y+ IL ++  Y+D YLRL  IA+ R  +  +     +AL
Sbjct: 552 VRYNRARLHEVCGRPDLAEEIYKSILLQHPSYIDCYLRLGCIARDRGMIWDASIWFKDAL 611

Query: 587 KVNGKYPNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYFAALRN 645
            ++  +P+  S++G L L  ++  +A++ F R     T   D++A +SLGN  +   L +
Sbjct: 612 DIDPDHPDVWSLIGLLHLSKNEAEQAQKKFDRIIRQPTYRADAFARISLGNI-WLTTLHH 670

Query: 646 EKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAA 705
             R       H ++A   Y  V+     N++AA+G G VLA KG  + ++D+F QV+EA 
Sbjct: 671 PIRDKDKRKRHQDRALSFYKAVLCADPRNIWAAHGIGCVLAHKGFVNEARDVFAQVREAT 730

Query: 706 SGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQ 765
           +       PDVWIN+AH+Y  Q  +  A++MY+NCL+KF    + ++L YLAR +++A Q
Sbjct: 731 A-----DFPDVWINIAHIYVEQKQYTAAIQMYENCLKKFSMQNNTELLQYLARAYFKAGQ 785

Query: 766 WQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRV 825
            ++CK  LL+A+H+ P +  L F+  +  ++ + + LQ    +   V   +A+L  A   
Sbjct: 786 LKECKTMLLKAMHVKPWDQLLTFNLALVRKRLAVTVLQDETSSFLSVCDAIADLNMARCT 845

Query: 826 FSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAE-REEQQN--RQRQEAARQ 882
           F HLS ++ +        +  T    C+ LL  AK H + A+ REEQ+   R+RQE  R+
Sbjct: 846 FDHLSKSNEVLNQALAADEART----CQDLLSQAKYHLDRAKSREEQERVVRKRQEDERE 901

Query: 883 AALAEEARRKAEEQKK 898
           A    + +R+ E QK+
Sbjct: 902 A----QRKRQIELQKQ 913


>gi|328701579|ref|XP_001951487.2| PREDICTED: RNA polymerase-associated protein CTR9 homolog isoform 1
           [Acyrthosiphon pisum]
          Length = 1177

 Score =  473 bits (1217), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 290/917 (31%), Positives = 496/917 (54%), Gaps = 58/917 (6%)

Query: 4   VYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQIL 63
           + IP+++S+E + + LD+LP +  ++L ILK+E++ L +W+ +A EY+K+G      ++L
Sbjct: 5   IEIPLKDSDEVIEIQLDKLP-EYDEVLGILKSERSNLHIWVNLALEYYKRGNSAALVKLL 63

Query: 64  EEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRI 123
           E   S    EY  D   +++  L+ L  YY      E  + ++ E F  ATQ Y  A +I
Sbjct: 64  ESSRSNASLEY-KDSDKDQMRALDMLAAYYVQSANREKSKDKRRELFAKATQLYTTADKI 122

Query: 124 DMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSL 182
            M++ +  +G+    L +G+ ++QA + F  VL    +N+PA LG+AC+ FNR  +  +L
Sbjct: 123 IMYDTNHLLGRAFFCLLEGDKIDQADAQFNFVLNQSSNNIPAQLGKACIAFNRKDFRGAL 182

Query: 183 EFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDL 242
            +YK+ L+ +P CP  +RLG+  C  KLG   KAR AF+RA+QLD + V ALV LA++ L
Sbjct: 183 AYYKKVLRSNPQCPADVRLGMAHCFLKLGNAEKARLAFERAIQLDSKCVGALVGLAILKL 242

Query: 243 QANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGP 302
                  I+ G+  + +A+ I     M LN+L+NHFFF   +   E L   AL  T +  
Sbjct: 243 NGENPGDIKLGVNMLSKAYTIDTTNPMVLNHLSNHFFFKKDYTKYELLARHALQNTENEA 302

Query: 303 TKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSAL 362
            ++ S Y +AR++H + +Y++A  YY  + +    P  F+ P+YGLGQ+ +  GD  +A 
Sbjct: 303 MRAESCYQMARAFHVQNNYDQAFQYYYQATQFA--PVTFVLPHYGLGQMYIYGGDMENAA 360

Query: 363 TNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKIDPRDAQAFIDLGEL 419
             FEKVL+ +P N E +K LG +Y      +K   A+  L+K  +  P D +A+I+L ++
Sbjct: 361 QCFEKVLKAHPGNYEAMKILGSLYANSKNQQKRDIAKSHLKKVTEHFPDDVEAWIELAQI 420

Query: 420 LISSDTGAALDAFKTARTLLK-KAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDG 478
           L  SD   +L A+     L++ +    +P E+LNN+  ++F     + A    +++L   
Sbjct: 421 LEQSDLQGSLSAYGKVIVLMRNQVNNYIPPEILNNVAALNFRLQNMDEARSKLEESLS-- 478

Query: 479 IWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQI 538
                            S  M++  D Q ++               VT  FNLAR+ E  
Sbjct: 479 ----------------LSKKMVE-ADPQYYNSIA------------VTTTFNLARIFEAQ 509

Query: 539 HDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSM 598
                A   Y+ IL ++ +Y+D YLRL  +A+ RN +  + +   EAL+++ ++P+A S+
Sbjct: 510 CQFQKAETFYKDILKEHPNYIDCYLRLGCMARDRNQIYEASDWFKEALRIDNEHPDAWSL 569

Query: 599 LGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHL 657
           LG+L L   +W   ++ F R   + +   DSY+ ++LGN  +   L    R  + E  H 
Sbjct: 570 LGNLHLAKMEWGPGQKKFERVLKNPSTLNDSYSLIALGNV-WLQTLHQPTRNKEQEKRHQ 628

Query: 658 EKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVW 717
           + A + +T+V+     N++AANG G V+A K   + ++D+F QV+EA +        DVW
Sbjct: 629 DLALQFFTKVLKNDPKNIWAANGIGCVMAHKQYINEARDIFAQVREATA-----DFCDVW 683

Query: 718 INLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAI 777
           +N+AH+Y  Q  +  A++MY+NC++KF+ + + +IL YL R +++A + ++ KK  L+A 
Sbjct: 684 LNIAHIYIEQKQYISAIQMYENCIKKFFKHDNVEILQYLGRAYFKAGKLKEAKKVFLKAR 743

Query: 778 HLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHL 837
            +AP +  + ++    +QK SA TL+  +    +V   V EL  + + F +L  A N   
Sbjct: 744 RVAPQDLVIIYNIAFVLQKLSAQTLKDGKSNLKDVLKAVHELGLSHKYFQYL--AVNGDR 801

Query: 838 HGFDEKKINTHVEYCKHLLDAAKIHREAAER---EEQQNRQRQEAARQAALAEE------ 888
             +D    +   + C+ LL  A+ H   A +   +E++ R++QE  R++   ++      
Sbjct: 802 MRYDVNLADFEAKQCQDLLSQAQYHVARARKMDHDEREMRRKQEEERESLRVKQIEEQTK 861

Query: 889 ARRKAEEQKKYLLEKRK 905
           A +K EEQ+K +L KR+
Sbjct: 862 ALQKQEEQRKEMLLKRQ 878


>gi|193659732|ref|XP_001943461.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog
           [Acyrthosiphon pisum]
          Length = 1185

 Score =  473 bits (1216), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 296/940 (31%), Positives = 504/940 (53%), Gaps = 69/940 (7%)

Query: 4   VYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQIL 63
           + IP+++S+E + + LD+LP +  ++L ILK+E + L +W+ +A EY+K+G      ++L
Sbjct: 5   IEIPLKDSDEVIEIQLDKLP-EYDEVLGILKSEHSNLHIWVNLALEYYKRGNSAALVRLL 63

Query: 64  EEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRI 123
           E   S    EY  D   +++  L+ L  YY      E  + ++ E F  ATQ Y  A +I
Sbjct: 64  ESSRSNASLEY-KDSDKDQMRALDMLAAYYVQTANREKSKDKRRELFTKATQLYTTADKI 122

Query: 124 DMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSL 182
            M++ +  +G+    L +G+ +EQA + F  VL    +N+PA LG+AC+ FNR  Y  +L
Sbjct: 123 IMYDTNHLLGRAFFCLLEGDKIEQADAQFNFVLNQSSNNIPAQLGKACIAFNRKDYRGAL 182

Query: 183 EFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDL 242
            +YK+AL+ +P CP  +RLG+  C  KLG + KAR AF+RALQLD + V ALV LA+M L
Sbjct: 183 AYYKKALRSNPQCPADVRLGMAHCFLKLGNIEKARLAFERALQLDSKCVGALVGLAIMKL 242

Query: 243 QANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGP 302
                  I+ G+  + +A+ I     M LN+L+NHFFF   +   E L   AL  T +  
Sbjct: 243 NGENPGDIKLGVNMLSKAYTIDTTNPMVLNHLSNHFFFKKDYTKSELLARHALQNTENEA 302

Query: 303 TKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSAL 362
            ++ S Y +AR++H + +Y++A  YY  + +    P  F+ P+YGLGQ+ +  GD  +A 
Sbjct: 303 MRAESCYQMARAFHVQNNYDQAFQYYYQATQFA--PVTFVLPHYGLGQMYIYGGDMENAA 360

Query: 363 TNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKIDPRDAQAFIDLGEL 419
             FEKVL+ +P N E +K LG +Y      +K   A+  L+K  +  P D +A+++L ++
Sbjct: 361 QCFEKVLKAHPGNYEAMKILGSLYADSKNQQKRDIAKSHLKKVTEHFPDDVEAWVELAQI 420

Query: 420 LISSDTGAALDAFKTARTLLKKA-GEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDG 478
           L  SD  A+L A+  A  L++ +    +P E+LNN+  +++     + +    +++L   
Sbjct: 421 LEQSDLQASLSAYDKAMVLMRNSVNNYIPPEILNNVAALNYRLKNMDESRSKLEESL--- 477

Query: 479 IWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNK--VTVLFNLARLLE 536
                  S +K  V                   E D  H    +N   VT  +NLAR+ E
Sbjct: 478 -------SLSKKMV-------------------EADPQH----YNSIAVTTTYNLARIFE 507

Query: 537 QIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNAL 596
                  A  LY+ IL ++ +Y+D YLRL  +A+ RN +  + +   EAL+++ ++P+A 
Sbjct: 508 AQCQFQKAETLYKDILKEHPNYIDCYLRLGCMARDRNQIYEASDWFKEALRIDNEHPDAW 567

Query: 597 SMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEAT 655
           S+LG+L L   +W   ++ F R   + +   DSY+ ++LGN  +   L    R    E  
Sbjct: 568 SLLGNLHLAKMEWGPGQKKFERVLKNPSTLNDSYSLIALGNV-WLQTLHQPTRNKDQEKR 626

Query: 656 HLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPD 715
           H + A + +T+V+     N++AANG G V+A K   + ++D+F QV+EA +        D
Sbjct: 627 HQDLALQFFTKVLKNDPRNIWAANGIGCVMAHKHCINEARDIFAQVREATA-----DFCD 681

Query: 716 VWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLR 775
           VW+N+AH+Y  Q  +  A++MY+NC++KF+ +   ++L YL R ++ A + ++ K   L+
Sbjct: 682 VWLNIAHIYIEQKQYISAIQMYENCMKKFFKHDSVEVLQYLGRAYFRAGKLKEAKTVFLK 741

Query: 776 AIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASNL 835
           A  +AP +  + ++    +QK +A  L+  +    +V   V EL  + + F +LS     
Sbjct: 742 ARRVAPQDTVIIYNIAFVLQKLAAQILKDEKSNLKDVLKAVHELGLSHKYFQYLS----- 796

Query: 836 HLHG----FDEKKINTHVEYCKHLLDAAKIHREAAER---EEQQNRQRQEAARQAALAEE 888
            +HG    +D    +   + C+ LL  A+ H   A +   +E++ R++QE  R     E 
Sbjct: 797 -VHGDRMRYDVSLADIEAKQCQDLLSQAQYHVARARKMDNDEREMRRKQEEER-----ES 850

Query: 889 ARRKAEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVKARIF 928
            R K  E++   L+K++ + ++  L++QE   +   A +F
Sbjct: 851 LRVKQIEEQTKALQKQEEQRKEMLLKRQEYREKTKSALVF 890


>gi|410973400|ref|XP_003993141.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Felis
           catus]
          Length = 1141

 Score =  469 bits (1206), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 311/922 (33%), Positives = 488/922 (52%), Gaps = 98/922 (10%)

Query: 2   ACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQ 61
             + IP+++++E + +  DQLP +  +++ ILK E   L +W+ +A EY+KQGK E+F +
Sbjct: 4   GSIEIPLRDTDEVIELDFDQLP-EGDEVISILKQEHTQLHIWIALALEYYKQGKTEEFVK 62

Query: 62  ILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNK 119
           +LE   +  ID    Y D   +++  L+ L  YY    + E  +  K++    AT  Y  
Sbjct: 63  LLE---AARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNKKDLITQATLLYTM 119

Query: 120 ASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRY 178
           A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+PALLG+AC+ FN+  Y
Sbjct: 120 ADKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPALLGKACISFNKKDY 179

Query: 179 SDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA 238
             +L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF RAL+L+ + V ALV LA
Sbjct: 180 RGALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALELNSKCVGALVGLA 239

Query: 239 VMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVT 298
           V++L   EA  I+ G++ + RA+ I P   M LN+LANHFFF   +  V+ L   A   T
Sbjct: 240 VLELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNT 299

Query: 299 NHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDF 358
                ++ S Y LARS+H + DY++A  YY  + +  +    F+ P++GLGQ+ +  GD 
Sbjct: 300 EVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASSS--FVLPFFGLGQMYIYRGDK 357

Query: 359 RSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKIDPRDAQAFID 415
            +A   FEKVL+ YP+N ET+K LG +Y      EK   A+  L+K  +  P D +A+I+
Sbjct: 358 ENASQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKVTEQYPDDVEAWIE 417

Query: 416 LGELLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDA 474
           L ++L  +D   AL A+ TA R L +K   +VP E+LNN+G +HF  G    A + F   
Sbjct: 418 LAQILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYF--- 474

Query: 475 LGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWN--KVTVLFNLA 532
                 L  LD                        R + +  H E  +N   VT  +NLA
Sbjct: 475 ------LASLD------------------------RAKAEAEHDEHYYNAISVTTSYNLA 504

Query: 533 RLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKY 592
           RL E + +   A  LY+ IL ++ +YVD YLRL A+A+ + N   + +   EAL++N  +
Sbjct: 505 RLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEASDWFKEALQINQDH 564

Query: 593 PNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYFAALRNEKRAPK 651
           P+A S++G+L L   +W   ++ F R     +   D+Y+ L+LGN  +   L    R  +
Sbjct: 565 PDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQSDTYSMLALGNV-WLQTLHQPTRDRE 623

Query: 652 LEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFV 711
            E  H ++A  +Y +V+     NLYAANG                               
Sbjct: 624 KEKRHQDRALAIYKQVLRNDAKNLYAANG------------------------------- 652

Query: 712 QMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKK 771
                 I        Q  +  A++MY+NCLRKFY + + +++LYLAR  ++  + Q+CK+
Sbjct: 653 ------IXXXXXXVEQKQYISAVQMYENCLRKFYKHQNTEVVLYLARALFKCGKLQECKQ 706

Query: 772 SLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSA 831
           +LL+A H+APS+  L F+  + +Q+ + S L+  +    EV + V ELE A R FS+LS 
Sbjct: 707 TLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVLNAVKELELAHRYFSYLSK 766

Query: 832 ASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNR-------QRQEAARQAA 884
             +     FD     T    C  LL  A+ H   A +++++ R       Q +E  RQ  
Sbjct: 767 VGDKMR--FDLALAATEARQCSDLLSQAQYHVARARKQDEEERELRAKQEQEKELLRQKL 824

Query: 885 LAEE--ARRKAEEQKKYLLEKR 904
           L E+   R + +E++K LLE+R
Sbjct: 825 LKEQEEKRLREKEEQKKLLEQR 846


>gi|195995663|ref|XP_002107700.1| hypothetical protein TRIADDRAFT_18957 [Trichoplax adhaerens]
 gi|190588476|gb|EDV28498.1| hypothetical protein TRIADDRAFT_18957 [Trichoplax adhaerens]
          Length = 938

 Score =  468 bits (1203), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 299/913 (32%), Positives = 493/913 (53%), Gaps = 62/913 (6%)

Query: 4   VYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQIL 63
           + IP+++S+E + + L+QLP   ++ L IL+ E+  L +W I+A++Y+K G+ + F  +L
Sbjct: 7   IEIPLRDSDEVIELDLNQLPH-GNESLAILREERPQLRIWNILAQQYYKHGQQDAFLSVL 65

Query: 64  EEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRI 123
           E      + +Y  D   + +  L++L  Y+  LGK  + +    E F  A   ++K  +I
Sbjct: 66  EAAVEEAVVDY-PDSDRDLMTSLDSLANYFVELGKKASNKDLTREFFGKAALLFSKGDKI 124

Query: 124 DMHEPSTWVGKGQLLLAKGEVEQASSAFKIVL-EADRDNVPALLG-QACVEFNRGRYSDS 181
            MH     V +G   LA G+ EQA + F  VL + ++ N PALLG +A + FNR  Y+++
Sbjct: 125 IMHHEGHLVSRGWFYLADGKFEQAEAQFNFVLTQLNKKNPPALLGRKATILFNRKDYNEA 184

Query: 182 LEFYKRALQVHP-SCPGAIRLGIGLCRYKLGQLGKAR-QAFQRALQLDPENVEALVALAV 239
           L  YK  L++ P +CP  +RLGIG C  +L +   AR QAF+R LQLDP+ V A+VALAV
Sbjct: 185 LNLYKEVLRLKPKTCPANVRLGIGHCYARLNKFDLARLQAFERTLQLDPKCVGAMVALAV 244

Query: 240 MDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTN 299
           ++L    A  IR G++ + RA+ I    AMALN+LANHFF+   +  V+ L   A   TN
Sbjct: 245 LELNTKVADSIRNGVDLLSRAYTIDQTNAMALNHLANHFFYKKDYDKVQHLALHAFHSTN 304

Query: 300 HGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFR 359
             P ++ S Y LAR +HS  DY++A  YY  + +  +    ++ P++GLGQ+ L   D  
Sbjct: 305 VEPIQAESCYQLARVFHSMQDYDQAFKYYYQATQFADS--NYVLPHFGLGQLYLTRNDSA 362

Query: 360 SALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKIDPRDAQAFIDL 416
           +A ++FEKVL++  DN E++K LG IY +    EK   A+ LL+KA    P D +A+I+L
Sbjct: 363 NAASSFEKVLKVQSDNYESMKILGSIYARSNNEEKRERAKILLQKATTQHPDDIEAWIEL 422

Query: 417 GELLISSDTGAALDAFKTARTLLKKAGE-EVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
             +L  SD   AL A+ T+  LL++  E ++P E+LNN   +HF  G F  A ++F  AL
Sbjct: 423 AGILEGSDIQGALSAYGTSSRLLQETLETDIPPEILNNAAALHFRLGNFLEAMKNFSAAL 482

Query: 476 GDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLL 535
                      + K    +++     F  +                   VT+ +N+ARL 
Sbjct: 483 ----------ERAKLEANESTEGSSYFNTI------------------SVTITYNVARLH 514

Query: 536 EQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNA 595
           E + +   A  LY+ IL  + +Y+D YLRL  +A+ + +   + +   EAL +  ++ + 
Sbjct: 515 EALCEHDEAEKLYKQILKDHPNYIDCYLRLGCMARDKGHFYEASDWYTEALVIEREHKDT 574

Query: 596 LSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEAT 655
            S++G+L +   +W  A++ +    +  +  D+Y  +++GN  +   L    + P     
Sbjct: 575 WSLIGNLHMMKQEWGPAQKKYERILN-QNKDDTYGLVAMGNI-WLQTLYQPTKDPDKNRR 632

Query: 656 HLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPD 715
           H ++A  LY +VI     N+YAANG G VLA+      S+++F QV+EA +      M D
Sbjct: 633 HRDRALSLYKQVIRLDPRNIYAANGIGAVLAQSSFHQESREIFAQVREATA-----DMFD 687

Query: 716 VWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLR 775
           VW+NLAHVY  Q  +++A++MY++C+ +F  N + ++LLYLAR +++  + Q+C + L++
Sbjct: 688 VWLNLAHVYTEQQQYSIAIQMYRSCIERFSMNQNTEVLLYLARAYFKDGRLQNCNRILVK 747

Query: 776 AIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASNL 835
           A H+AP    L F+  + +Q  +   L+      ++++  + +L+ A + F+ L    + 
Sbjct: 748 AFHIAPQETLLLFNICLVLQCMAVVVLEDEYNQVEDIKEAIEQLKLAHKYFTFLGETGD- 806

Query: 836 HLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEAARQAALAEEARRKAEE 895
               FD  +      +C  LL  A+ H   A       RQ++E         E  RK EE
Sbjct: 807 -KTKFDLDQATAESRHCSDLLSQAQYHVTRA-----STRQKEEL--------ELIRKYEE 852

Query: 896 QKKYLLEKRKLED 908
                +EKRK ++
Sbjct: 853 NYLASIEKRKTDE 865


>gi|357606129|gb|EHJ64926.1| putative tpr repeat nuclear phosphoprotein [Danaus plexippus]
          Length = 1194

 Score =  464 bits (1194), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 299/883 (33%), Positives = 480/883 (54%), Gaps = 61/883 (6%)

Query: 10  NSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQILEEGSSP 69
           +++E + +  + LP    ++L IL+ E++ L++W+ +A  Y+KQ K++ F +ILE  S  
Sbjct: 2   STDEVIELDPESLP-CGEEVLSILQQERSQLNVWINVALAYYKQNKIDDFLKILE-ASRV 59

Query: 70  EIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPS 129
           + +  Y D   +++  L+ L  YY      E  + +K+E F  AT  Y  A +I M++ +
Sbjct: 60  DANIDYRDFERDQMRALDMLAAYYVQEANKEKSKDKKKELFTEATLLYTMADKIIMYDQN 119

Query: 130 TWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRA 188
             +G+    L +G+ + QA + F  VL    +NVP+LLG+AC+ FNR  Y  +L FYK+A
Sbjct: 120 HLLGRAYFCLLEGDKMAQADTQFNFVLNQSPNNVPSLLGKACIAFNRKDYRGALAFYKKA 179

Query: 189 LQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAA 248
           L+ +P+ P A+RLG+G C  KL    KAR AF+RALQLDP+ V ALV L+++ L   E+ 
Sbjct: 180 LRTNPNSPAALRLGMGHCFMKLNNQEKARMAFERALQLDPQCVGALVGLSILKLNLQESE 239

Query: 249 GIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSY 308
             +  +  + +A+ I P   M LN+LANHFFF   +  V+ L   A   T +   ++ S 
Sbjct: 240 SNKMAVIMLSKAYAIDPKNPMVLNHLANHFFFKKDYSKVQHLALHAYHNTENDAMRAESC 299

Query: 309 YNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKV 368
           ++LAR+YH++GD  KA  YY  + +    P  F+ P+YGLGQ+ +  GD  +A   FEKV
Sbjct: 300 HHLARAYHAQGDCVKAFQYYYQATQFA--PPNFVLPHYGLGQMYIYRGDTENAAQCFEKV 357

Query: 369 LEIYPDNCETLKALGHIYVQ-LGQIEK--AQELLRKAAKIDPRDAQAFIDLGELLISSDT 425
           L+  P N ET+K LG +Y     Q+++  A++ L+K  +  P D +A+I+L ++L  +D 
Sbjct: 358 LKAQPGNYETMKILGSLYANSPSQLQRDIARQHLKKVTEQFPDDVEAWIELAQILEQNDL 417

Query: 426 GAALDAFKTARTLLK-KAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLL 484
             +L+A+ TA  +LK K   E+P E+LNN+  +H+  G    A +  ++AL         
Sbjct: 418 QGSLNAYTTAMKILKEKVNAEIPAEILNNVAALHYRLGNLNEAMKYLEEALE-------- 469

Query: 485 DSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAA 544
             K +   +DA     Q+ +  L                 VT ++NLARL E +     A
Sbjct: 470 REKVEAETLDA-----QYYNSIL-----------------VTTMYNLARLNEALCVYNKA 507

Query: 545 SVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLEL 604
             LY+ IL ++ +Y+D YLRL  +A+ +  +  + +   EALKVN ++P+  S+LG+L L
Sbjct: 508 EKLYKDILKEHPNYIDCYLRLGCMARDKGQIYEASDWFKEALKVNIEHPDTWSLLGNLHL 567

Query: 605 KNDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKEL 663
              +W   ++ F R   ++T   D+Y+ ++LGN  +   L    R    E  H E+A  L
Sbjct: 568 AQQEWGPGQKKFERILQNSTTSNDAYSLIALGNV-WLQTLHQPGREKDREKRHQERALAL 626

Query: 664 YTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHV 723
           Y +V+     N++AANG G VLA KG  + ++D+F QV+EA +       PDVW+N+AH+
Sbjct: 627 YKQVLKNDPKNIWAANGIGCVLAHKGCINEARDIFAQVREATA-----DFPDVWMNIAHI 681

Query: 724 YFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSN 783
           Y  Q  +  A++MY+NC+RKF  + D + L +L R    A + +  + SLLRA  +AP +
Sbjct: 682 YVDQKQYINAIQMYENCIRKFRTHHDVEWLTWLGRAQTLAGRARAARTSLLRARRVAPHD 741

Query: 784 YTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGFDEK 843
             L ++  +A+++ +A  L+  R     V   V EL  + R F  L AA+          
Sbjct: 742 PALLYNTALALRRLAAHVLKDERSELRVVLRAVHELHVSHRYFQRLGAAA---------- 791

Query: 844 KINTHVEYCKHLLDAAKIHREAAEREEQQN---RQRQEAARQA 883
                   C  LL  A+ H   A R+ Q+    R +Q   R+A
Sbjct: 792 --AAEARTCADLLSQAQWHVARARRQHQEELTLRDKQREQREA 832


>gi|193580212|ref|XP_001944071.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog
           [Acyrthosiphon pisum]
          Length = 1173

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 294/919 (31%), Positives = 493/919 (53%), Gaps = 66/919 (7%)

Query: 6   IPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQILEE 65
           IP+++S+E + + LD+LP +  ++  ILK+E + L +W+ +A EY+K+G       +LE 
Sbjct: 7   IPLKDSDEVIEIQLDKLP-EYDEVHGILKSENSNLHIWVNLALEYYKKGNSVALVGLLE- 64

Query: 66  GSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDM 125
            S       Y D   +++  L+ L  YY      E  + +K E F  ATQ Y  A +I M
Sbjct: 65  SSRRNASLKYKDSNKDQMRALDMLAAYYVQTANQEKNKDKKRELFNKATQLYTTADKIIM 124

Query: 126 HEPSTWVGKGQL-LLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEF 184
           ++ +  +G+  L LL  G +EQA + F  VL    +N+PA LG+AC+ F +  Y   L +
Sbjct: 125 YDMNHLLGRAFLCLLEGGRIEQADAQFNFVLNQSFNNLPAQLGKACIAFIKKDYRGCLAY 184

Query: 185 YKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQA 244
           YK+ L+    CP  +R+G+  C  KLG + KA+ AF+RALQLDP+ V+ALV LAVM L  
Sbjct: 185 YKKVLRSSSECPADVRVGMAYCFLKLGNIEKAQLAFERALQLDPKCVDALVGLAVMKLNG 244

Query: 245 NEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTK 304
              A I+ G+  + +A+ I     M LN+L+NHFF+   +   E L   AL  T +   +
Sbjct: 245 ESPADIKLGVNMLSKAYTIDTTNPMVLNHLSNHFFYKKDYAKSELLARRALQNTENDAMR 304

Query: 305 SHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTN 364
           + S Y++AR +H + +Y++A  YY  + +    P  F+ PY+GLGQ+ +  GD  +A   
Sbjct: 305 AESCYHMARVFHVQNNYDQAFQYYYQATQFA--PVTFVLPYFGLGQMYIYGGDKENAAQC 362

Query: 365 FEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKIDPRDAQAFIDLGELLI 421
           FEKVL+ +P+N E +K LG +Y +    +K   A+  L+KA +  P DA+ +I+L ++L 
Sbjct: 363 FEKVLKAHPENYEAMKILGSLYTKSKSQQKRDIAKSYLKKATEHFPDDAEIWIELAQILE 422

Query: 422 SSDTGAALDAFKTARTL-LKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIW 480
           +SD  A+L A+  A  L L +A   +  E+LNN+  +++     + AH   +++L     
Sbjct: 423 ASDLHASLSAYGKAMGLILNRANNYISPEILNNVAALNYRLNNMDEAHSKLEESLS---- 478

Query: 481 LTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHD 540
                          S  M++  D Q ++             N VT L+NLAR+ E    
Sbjct: 479 --------------LSKKMVE-TDPQRYNS------------NAVTTLYNLARIYEVQCQ 511

Query: 541 TVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLG 600
              A   Y+ IL ++ +Y+  YLRL  +A+ RN +  + +   EAL+V+ + P+A ++LG
Sbjct: 512 FQKAETFYKDILKEHPNYISCYLRLGCMARDRNQIYEASDWFKEALRVDNENPDAWALLG 571

Query: 601 DLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEK 659
           +L L   +W   ++ F R   + +   D Y+ ++LGN  +   L    R    E  H + 
Sbjct: 572 NLHLAKMEWGPGQKKFERVLKNPSTLNDPYSLIALGNV-WLQTLHQPTRNKDQEKRHQDL 630

Query: 660 AKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWIN 719
           A + YT+V+     N++AANG G VLA K   + ++D+F+QV+EA S        DVW+N
Sbjct: 631 ALQFYTKVLKYDPRNIWAANGIGCVLAYKHCINEARDIFSQVREATS-----DFCDVWLN 685

Query: 720 LAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHL 779
           +AH+Y  Q  +  A++MY++C++KF+ + + ++L YL R ++ A   ++ K+  L+A  +
Sbjct: 686 IAHIYVEQKQYISAIQMYESCIKKFFKHDNVEVLQYLGRAYFRAGMLKEAKRVFLKARRV 745

Query: 780 APSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHG 839
           AP +  + ++    +QK +   L+  +    +V     ELE + + F +LS      +HG
Sbjct: 746 APQDTIIIYNIAFVLQKLAILILKDEKSNLKDVLKATNELELSHKYFQYLS------VHG 799

Query: 840 ----FDEKKINTHVEYCKHLLDAAKIHREAAER---EEQQNRQRQEAARQAALAEE---- 888
               +D    N   + CK LL  A+ H   A +   +E+ +R++QE  R+    ++    
Sbjct: 800 DRMRYDVDLANIEAKQCKDLLSQAQYHVARARKMDNDERDSRRKQERERELYRVKQIEEQ 859

Query: 889 --ARRKAEEQKKYLLEKRK 905
             A +K +EQ+K +L KR+
Sbjct: 860 TIALQKQDEQRKEMLLKRQ 878


>gi|170581356|ref|XP_001895649.1| TPR Domain containing protein [Brugia malayi]
 gi|158597331|gb|EDP35505.1| TPR Domain containing protein [Brugia malayi]
          Length = 1352

 Score =  460 bits (1184), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 283/834 (33%), Positives = 441/834 (52%), Gaps = 80/834 (9%)

Query: 11   SEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQILE-EGS-- 67
            S E + +  D LP D  ++L IL+ E A L+ W+ +A  Y+++G    F +ILE  GS  
Sbjct: 233  SLEIIELDFDNLPDDGEEVLAILRGEHATLNFWVDLALAYYRRGNEADFVRILEMSGSEA 292

Query: 68   SPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHE 127
            S E  EY+ D    ++  L+ L  YY      E  + +K+E    AT  Y  A +I M++
Sbjct: 293  SLEYPEYHQD----QMRALDTLAAYYVIQSHKERNKDKKKEWQTKATLLYTTADKIIMYD 348

Query: 128  PSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKR 187
                +G+    L +G+++QA   F  VL    +N+PA LG+AC+ F R  Y  +L  YK 
Sbjct: 349  TYHLLGRAYFCLLEGKIDQAEQQFNFVLNQVGENIPATLGKACIFFQRKEYRKALNCYKS 408

Query: 188  ALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEA 247
             L+  P CP  +RLGIG C  KLG+L KAR AF+R L LD ENV ALVALA++D+   E 
Sbjct: 409  VLRKMPDCPADVRLGIGYCLAKLGRLDKARLAFKRVLDLDKENVSALVALAILDMNTLEQ 468

Query: 248  AGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHS 307
              IR+G+E   RA++I     + LN+LANHFF+  +   VE L   A  +T++   ++ S
Sbjct: 469  EAIRRGVESFGRAYQIEQENPVVLNHLANHFFYKKELDRVEHLAWHAFQITDNEAMRAES 528

Query: 308  YYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEK 367
             Y LAR+                          F+ PY+GLGQ+ +   D+ +A+  FEK
Sbjct: 529  CYQLART-------------------------NFVLPYFGLGQMYICREDYDNAIQCFEK 563

Query: 368  VLEIYPDNCETLKALGHIYVQ---LGQIE------KAQELLRKAAKIDPRDAQAFIDLGE 418
            VL+  P N +TLK LG +Y       Q E      KA+E+ +K  ++ P D +A IDL +
Sbjct: 564  VLKACPTNYDTLKILGSLYAHSEPANQKERSERRKKAREIFKKVVEMCPDDVEALIDLAQ 623

Query: 419  LLISSDTGAALDAFKTARTLLKKAGE-EVPIEVLNNIGVIHFEKGEFESAHQSFKDALGD 477
            L  + D   +LDA+  A T L +  E ++P E+ NN+G ++F  G++E A + F++AL +
Sbjct: 624  LTENCDPQGSLDAYTKASTFLSQMIEVDIPPEITNNVGSLYFTVGQYEKAREYFEEALKE 683

Query: 478  GIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQ 537
                  L     T   D +A  LQ                        TV +NLAR LE 
Sbjct: 684  ------LGEVVSTGQTDLAA--LQ-----------------------TTVTYNLARSLEM 712

Query: 538  IHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALS 597
            +     A  LY+ IL +  +Y+D Y+RL  +A+ +  +  S     E + VN  + +A S
Sbjct: 713  LCMFDEAERLYKGILQEKPNYIDCYMRLGCLARDKGQIYESSVWFKEGMSVNQSHADAWS 772

Query: 598  MLGDLELKNDDWVKAKETFRAASDATD-GKDSYATLSLGNWNYFAALRNEKRAPKLEATH 656
            ++G+L +   +W  A++ F       +   D Y+ ++LGN  +   L +  R  + +  +
Sbjct: 773  LIGNLHMSKFEWAPAQKKFEYILKLPEYHDDPYSFVALGNI-WLETLSSIHRKKEKDKDY 831

Query: 657  LEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDV 716
             E+A  +Y++ +  H  N++AANG G +LA+KG    ++D+F QV+EA +        DV
Sbjct: 832  RERALMMYSKALKVHPKNIWAANGIGCILAQKGAIQEARDIFAQVREATA-----DFSDV 886

Query: 717  WINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRA 776
            WIN+AHVY  Q  +  A++MY NC++KF  + D  +LLYLAR HY+A ++ +C+  L +A
Sbjct: 887  WINIAHVYMEQKQYVAAIQMYDNCIKKFNRHNDVSLLLYLARAHYKAGKFSECRHILEKA 946

Query: 777  IHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLS 830
            I  AP N  L+F+    +QK +   L+  + + + V   V +L  A  +F ++S
Sbjct: 947  ICEAPDNMMLKFNHAFVLQKLATQMLRDDKSSLEMVTGAVDDLRTAATIFEYIS 1000


>gi|312385821|gb|EFR30226.1| hypothetical protein AND_00290 [Anopheles darlingi]
          Length = 1122

 Score =  457 bits (1176), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 294/901 (32%), Positives = 483/901 (53%), Gaps = 74/901 (8%)

Query: 1   MACVYIPVQNS---EEEVRVALD--QLPRDASDILDILKAEQAPLDLWLIIAREYFKQGK 55
           MAC  +        E +  + LD  QLP +  ++L IL+ E++ L+ W+ +A  Y+KQ K
Sbjct: 44  MACALLCATEHIAHESQTVIDLDPEQLP-EGEEVLGILRQERSLLNTWVTVALAYYKQKK 102

Query: 56  VEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQ 115
            + F +ILE  S  + +  Y D   +++   + L  YY      E  + +K E F+ AT 
Sbjct: 103 TDDFIKILE-ASRTDANTNYRDFEKDQMRAYDMLAAYYVQEANREKSKDKKRELFMKATL 161

Query: 116 YYNKASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQACVEFN 174
            Y  A +I M++ +  +G+    L +G+ ++QA + F  VL     N+P+LLG+AC+ FN
Sbjct: 162 LYTTADKIIMYDQNHLLGRAYFCLLEGDKMDQADAQFNFVLNQSPSNIPSLLGKACIAFN 221

Query: 175 RGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEAL 234
           +  Y  +L FYK+AL+ +P+CP A+RLG+G C  KL    KA+ AFQRAL L+P+ V AL
Sbjct: 222 KKDYRGALAFYKKALRTNPNCPAAVRLGMGHCFLKLNNQEKAKLAFQRALDLEPQCVGAL 281

Query: 235 VALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETA 294
           V LA++ L  +E    R G++ + +A+ I     M LN+LANHFFF   +  V+ L   A
Sbjct: 282 VGLAILKLNLHEPDSNRMGVQMLSKAYTIDSTNPMVLNHLANHFFFKKDYQKVQHLALHA 341

Query: 295 LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLK 354
              T +   ++ S Y LAR++H + DY++A  YY  S +    P  F+ P++GLGQ+ + 
Sbjct: 342 FHNTENEAMRAESCYQLARAFHVQHDYDQAFQYYYQSTQ--FAPANFVLPHFGLGQMYIY 399

Query: 355 LGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKIDPRDAQ 411
            GD        E VL+  P N ET+K LG +Y       K   A+  L+K  +  P D +
Sbjct: 400 RGD-------SENVLKAQPGNYETMKILGSLYATSSSQSKRDIAKNHLKKVTEQLPEDVE 452

Query: 412 AFIDLGELLISSDTGAALDAFKTARTLL-KKAGEEVPIEVLNNIGVIHFEKGEFESAHQS 470
           A+I+L ++L  +D   +L A+ TA ++L +K   ++P E+LNN+  +H+ +G  E +   
Sbjct: 453 AWIELAQILEQNDLVGSLQAYGTATSILTEKVNADIPPEILNNVAALHYRQGNLEESMAK 512

Query: 471 FKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFN 530
            + A                  I+ + +  Q  D Q +                VT+ +N
Sbjct: 513 LQQA------------------IECAKAEAQH-DAQYYDSIS------------VTMTYN 541

Query: 531 LARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNG 590
           LARL E +     A  LY+ IL ++ +Y+D YLRL  +A+ +  + ++ +   +ALK+N 
Sbjct: 542 LARLYEAMAAFDKADKLYKDILKEHPNYIDCYLRLGCMARDKGLIFVASDFFKDALKINM 601

Query: 591 KYPNALSMLGDLELKNDDWVKAKETFRAA-SDATDGKDSYATLSLGNWNYFAALRNEKRA 649
           + P+  S+LG+L L    W   ++ F     +     D+Y+ ++LGN+ +  +L    R 
Sbjct: 602 ENPDTRSLLGNLHLAKMQWTLGQKNFETILKNPATSSDAYSLIALGNF-WLQSLHQPNRD 660

Query: 650 PKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSV 709
            + E  H EKA  +Y +V+     N++AANG G VLA KG    ++D+F QV+EA +   
Sbjct: 661 KEKEKKHQEKALAIYKQVLRNDPKNIWAANGIGAVLAHKGCIIEARDIFAQVREATA--- 717

Query: 710 FVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDC 769
             +  DVWIN+AH+Y  Q  +  A++MY+NCL+KFY + + +++ YLAR ++ A + ++ 
Sbjct: 718 --EFCDVWINIAHIYVEQKQYISAIQMYENCLKKFYRHNNVEVMQYLARAYFRAGKLKEA 775

Query: 770 KKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHL 829
           K +LL+A  +AP +  L F+  + +Q+ + + L+  +     V   V EL  A + F++L
Sbjct: 776 KMTLLKARRVAPQDTVLLFNIALVLQRLATAVLRDEKSVLSVVLQAVHELGLAHKYFTYL 835

Query: 830 SAASNLHLHGFDEKKINT-----HVEYCKHLLDAAKIHREAAER---EEQQNRQRQEAAR 881
           S      +HG D+ + N          C+ LL  A+ H   A +   EE+  RQ+QE  R
Sbjct: 836 S------VHG-DKTRYNIALAEGEANQCQDLLQQAQYHVSRARKIDEEERSLRQKQELER 888

Query: 882 Q 882
           +
Sbjct: 889 E 889


>gi|156543124|ref|XP_001605583.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Nasonia
           vitripennis]
          Length = 1215

 Score =  456 bits (1172), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 299/951 (31%), Positives = 506/951 (53%), Gaps = 83/951 (8%)

Query: 4   VYIPVQNSEEEV-RVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQI 62
           + IP+++S +EV  + LDQLP    ++L IL  E A L++W+ +A EY+KQ K+E F +I
Sbjct: 5   IEIPLRDSPDEVIELYLDQLPH-GDEVLGILYQENAHLNIWVNLALEYYKQHKIEDFIKI 63

Query: 63  LEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASR 122
           LE   S    EY  D   +++  L+ L  YY      E  + +K++ F  AT  +  A +
Sbjct: 64  LESSRSKANTEY-RDYEKDQMRALDMLAAYYVQEANREKNKDKKKDLFTKATSLFIAADK 122

Query: 123 IDMHEPSTWVGKGQLLLAKG-EVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDS 181
           I M++ +  + +    L +G +++QA + F  VL    +N+P+LLG+AC+ +N+  Y  +
Sbjct: 123 IIMYDQNHLIARAYFCLLEGNKIDQADAQFNFVLNQSPNNIPSLLGKACIAYNKKDYRGA 182

Query: 182 LEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVM- 240
           L FY++ L+++P CP  +R+G+G C  KL    KAR A++RALQLD ++V ALV LA++ 
Sbjct: 183 LTFYRKVLRINPQCPADVRVGMGHCFVKLDNREKARCAYKRALQLDEKSVGALVGLAILK 242

Query: 241 --------DLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTE 292
                   D  +     I+ G++    A+ I     M LN+LANH+FF   +   ++L  
Sbjct: 243 LNEFNDTQDQNSEYENSIKDGIQMFATAYNIDQTNPMVLNHLANHYFFKKDYKTTQRLAL 302

Query: 293 TALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQ 352
            A   T +   ++ S Y LARS+  +GDY++A  YY  +  +   P  F+ P+YGLGQ+ 
Sbjct: 303 HAFHNTENESMRAESCYQLARSFQVQGDYDQAFQYYYQAT-QFASP-VFVLPHYGLGQMY 360

Query: 353 LKLGDFRSALTNFEKVLEIYPDNCETLKALGHIY---VQLGQIEKAQELLRKAAKIDPRD 409
           +  GD  +A   FEKVL+  P+N ET+K LG +Y   V   + + A+  L+K  +  P D
Sbjct: 361 IYRGDNENAAQCFEKVLKAQPNNYETMKILGSLYANSVTQSKRDMAKTFLQKVTEDHPDD 420

Query: 410 AQAFIDLGELLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAH 468
            +A+I+L ++L  SD  A+L A++TA R L +K   E+P E+LNNI  I +     + A 
Sbjct: 421 VEAWIELAQILEQSDLQASLKAYETATRILNEKIQAEIPPEILNNIAAIQYRLECLDEAR 480

Query: 469 QSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNK--VT 526
               ++L                                  R + D  H    +N   VT
Sbjct: 481 NKLTESL---------------------------------ERSKADAEHHPSYYNSIAVT 507

Query: 527 VLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEAL 586
             +NLAR+ E       A  LY+ +L ++ +Y+D YLRL  +A+ +  +  + +   +AL
Sbjct: 508 TTYNLARVYEAQCMFDKAEKLYKNVLKEHPNYIDCYLRLGCMARDKGQIYEASDWFKDAL 567

Query: 587 KVNGKYPNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYFAALRN 645
           +++ ++P+A S+LG+L L   +W   ++ F R   + +   D+Y+ ++LGN  +   +  
Sbjct: 568 RIDNEHPDAWSLLGNLHLAKQEWGPGQKKFERILRNPSTNNDAYSLIALGNI-WLQTMHQ 626

Query: 646 EKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAA 705
             +    E  H ++A   Y  V+     N++A NG G +LA KG  + ++D+F QV+EA 
Sbjct: 627 SGKDKDKEKRHQDRAMANYKLVLRNDPKNIWATNGVGCLLAHKGYMNEARDIFAQVREAT 686

Query: 706 SGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQ 765
           S     ++PDVW+N+AHVY  Q  +  A++MY+NCLRKFY     +IL YLAR + +A +
Sbjct: 687 S-----ELPDVWLNIAHVYVEQKQYVSAIQMYENCLRKFYKYHHVEILGYLARAYLKAGK 741

Query: 766 WQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRV 825
            ++ K +LL A  +AP +  L ++    +Q+ +   L+  +     V   V EL  + + 
Sbjct: 742 LKEAKLTLLTARRVAPQDPVLLYNVAYILQRLATMILKDEKSMLVTVLQAVHELGLSQKY 801

Query: 826 FSHLSAASNLHLHGFDEKKI----NTHVEYCKHLLDAAKIHREAAER---EEQQNRQRQE 878
           F +L++          E+K+          C+ LL  A+ H   A R   EE+  R++QE
Sbjct: 802 FQYLASR---------EEKMKQVAGKEARSCQDLLSQAQYHVARARRMDEEEKMLRKKQE 852

Query: 879 AARQAALAEEARRKAEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVKARIFY 929
              Q        R+ EEQ+K  +E+ + + E++ L++++E+ ++ K+ + +
Sbjct: 853 EESQTL----KMRQMEEQRK--MEEIRRQKEEEMLQKRQEYVEKTKSALVF 897


>gi|313232880|emb|CBY09563.1| unnamed protein product [Oikopleura dioica]
          Length = 1060

 Score =  452 bits (1163), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 288/907 (31%), Positives = 476/907 (52%), Gaps = 57/907 (6%)

Query: 4   VYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQIL 63
           + IP++NSEE + +    +P DA ++L+IL  E AP+ +WL IA E+++Q + ++F+++L
Sbjct: 9   IEIPIRNSEEVIELECASIP-DAQEVLNILSNEVAPMRVWLEIALEFWRQDRRDEFQRVL 67

Query: 64  EEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRI 123
           EE  S    +Y    + + +  L+ L  Y    GK E  + ++ + F+ AT  Y  A ++
Sbjct: 68  EEARSKAGKDYMGHEK-DTMRCLDTLAAYNVICGKQEVDKEKQTKFFMEATTLYTLADKV 126

Query: 124 DMHEPSTWVGKGQL-LLAKGE-VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDS 181
            M++ S  +G+    LL KG+ ++QA + F  VL+ D +++PALLG+AC+ FN+  +  +
Sbjct: 127 IMYDQSHLLGRACFCLLDKGDQLDQADNQFNFVLDQDLNSIPALLGKACIAFNKRDFKGA 186

Query: 182 LEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMD 241
           L  YK+ L+++P CP  IRLG+GLC Y++ ++GKA  AF RAL++D   + ALV LAV++
Sbjct: 187 LGHYKKCLRLNPGCPADIRLGMGLCFYRMNKIGKAVDAFTRALEIDKRCLGALVGLAVVN 246

Query: 242 LQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG 301
           L   +   +R  +     A++I    A+   +LANHFFF  Q    +QL   AL  T H 
Sbjct: 247 LNDRDVTSVRDAITLFSSAYKIDKKNALVHIHLANHFFFRNQIAKAQQLAFHALHHTEHQ 306

Query: 302 PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLG---DF 358
             ++ + Y L R +H  GDYE+A  YY  +    + P ++  P+Y LG + L+ G   D 
Sbjct: 307 QIRAEACYQLGRCHHKSGDYEQAFRYYNQAAN-FSTP-KYALPFYYLGCMYLQRGSLSDI 364

Query: 359 RSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKIDPRDAQAFID 415
             A+  FEK+L+ YP+  +T+K LGH+Y      EK   A+  L K    +P+D +A ID
Sbjct: 365 EQAIILFEKILKEYPNEHDTMKVLGHLYANSTDPEKCAMAKTHLEKVVAANPKDWEALID 424

Query: 416 LGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
             ++L       AL+ ++    L++  G EV  E+ NNIG +    G  + A ++ +  L
Sbjct: 425 YAQVLEQFTPEKALETYRRVIQLMEAVGVEVRAEIYNNIGTLQMRLGNLDDARENLQ--L 482

Query: 476 GDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLL 535
            +     LLD     Y                +    N            TV +N ARL 
Sbjct: 483 AEEQIKILLDGPEYLY----------------YRSLHN------------TVKYNSARLR 514

Query: 536 EQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNA 595
           E+++D   A  LY+ I+     Y+DA LRL  + + +  +  + +L  E L ++ + P+A
Sbjct: 515 EKMYDFDKAIWLYKEIVNNNPKYIDAILRLGCMHRDKGQIFDASDLFKEGLNIDPESPDA 574

Query: 596 LSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGN-WNYFAAL--RNEKRAPK 651
            S++G+L L+  +W   ++ F R         D+YA ++LGN W     +  ++++R  +
Sbjct: 575 WSLIGNLHLEKGEWGTGQKKFERILKAERTANDAYANVALGNVWLQMVHMPTKDQERLKR 634

Query: 652 LEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFV 711
               H E+A  LY  V+   + N+YAANG G VLA +G    ++D+F+ V+EA S     
Sbjct: 635 ----HQERALTLYKNVLRLDSKNIYAANGLGAVLAHRGYTSEARDIFSHVREATS----- 685

Query: 712 QMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKK 771
           +M DVW NLAH+Y  Q  F+ A++MY+N +R F    D   L YLAR  ++     +CK+
Sbjct: 686 EMKDVWFNLAHIYVEQKQFSSAIQMYKNAMRTFDLQNDPDCLTYLARALFKNNLMDECKR 745

Query: 772 SLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSA 831
            L++A  +AP +  + ++  + MQ+ +   L  ++    EV   V +LE + R FS L  
Sbjct: 746 CLIKARRVAPQDTVVLYNLALVMQQLAERKLTASKSNLKEVVGAVRDLELSERYFSWLQ- 804

Query: 832 ASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEAARQAALAEEARR 891
            SN     F           CK +L  A I+   A+  + + R  +E  + +      +R
Sbjct: 805 -SNGDRTKFALTGAANEARKCKDILTQAHIYVNRAKLADDEERAHRERTQASVTQASQKR 863

Query: 892 KAEEQKK 898
           K  EQ++
Sbjct: 864 KQREQER 870


>gi|313219659|emb|CBY30580.1| unnamed protein product [Oikopleura dioica]
          Length = 1060

 Score =  452 bits (1162), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 288/911 (31%), Positives = 477/911 (52%), Gaps = 65/911 (7%)

Query: 4   VYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQIL 63
           + IP++NSEE + +    +P DA ++L+IL  E AP+ +WL IA E+++Q + ++F+++L
Sbjct: 9   IEIPIRNSEEVIELECASIP-DAQEVLNILSNEVAPMRVWLEIALEFWRQDRRDEFQRVL 67

Query: 64  EEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRI 123
           EE  S    +Y    + + +  L+ L  Y    GK E  + ++ + F+ AT  Y  A ++
Sbjct: 68  EEARSKAGKDYMGHEK-DTMRCLDTLAAYNVICGKQEVDKEKQTKFFMEATTLYTLADKV 126

Query: 124 DMHEPSTWVGKGQL-LLAKGE-VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDS 181
            M++ S  +G+    LL KG+ ++QA + F  VL+ D +++PALLG+AC+ FN+  +  +
Sbjct: 127 IMYDQSHLLGRACFCLLDKGDQLDQADNQFNFVLDQDPNSIPALLGKACIAFNKRDFKGA 186

Query: 182 LEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMD 241
           L  YK+ L+++P CP  IRLG+GLC Y++ ++GKA  AF RAL++D   + ALV LAV++
Sbjct: 187 LGHYKKCLRLNPGCPADIRLGMGLCFYRMNKIGKAVDAFTRALEIDKRCLGALVGLAVVN 246

Query: 242 LQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG 301
           L   +   +R  +     A++I    A+   +LANHFFF  Q    +QL   AL  T H 
Sbjct: 247 LNDRDVTSVRDAITLFSSAYKIDKKNALVHIHLANHFFFRNQIAKAQQLAFHALHHTEHQ 306

Query: 302 PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLG---DF 358
             ++ + Y L R +H  GDYE+A  YY  +    + P ++  P+Y LG + L+ G   D 
Sbjct: 307 QIRAEACYQLGRCHHKSGDYEQAFRYYNQAAN-FSTP-KYALPFYYLGCMYLQRGSLSDI 364

Query: 359 RSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKIDPRDAQAFID 415
             A+  FEK+L+ YP+  +T+K LGH+Y      EK   A+  L K    +P+D +A ID
Sbjct: 365 EQAIILFEKILKEYPNEHDTMKVLGHLYANSTDPEKCAMAKTHLEKVVAANPKDWEALID 424

Query: 416 LGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
             ++L       AL+ ++    L++  G EV  E+ NNIG +    G  + A ++ +  L
Sbjct: 425 YAQVLEQFTPEKALETYRRVIQLMEAVGVEVRAEIYNNIGTLQMRLGNLDDARENLQ--L 482

Query: 476 GDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLL 535
            +     LLD     Y                +    N            TV +N ARL 
Sbjct: 483 AEEQIKILLDGPEYLY----------------YRSLHN------------TVKYNSARLR 514

Query: 536 EQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNA 595
           E+++D   A  LY+ I+     Y+DA LRL  + + +  +  + +L  E L ++ + P+A
Sbjct: 515 EKMYDFDKAIWLYKEIVNNNPKYIDAILRLGCMHRDKGQIFDASDLFKEGLNIDPESPDA 574

Query: 596 LSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGN-WNYFAAL--RNEKRAPK 651
            S++G+L L+  +W   ++ F R         D+YA ++LGN W     +  ++++R  +
Sbjct: 575 WSLIGNLHLEKGEWGTGQKKFERILKAERTANDAYANVALGNVWLQMVHMPTKDQERLKR 634

Query: 652 LEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFV 711
               H E+A  LY  V+   + N+YAANG G VLA +G    ++D+F+ V+EA S     
Sbjct: 635 ----HQERALTLYKNVLRLDSKNIYAANGLGAVLAHRGYTSEARDIFSHVREATS----- 685

Query: 712 QMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKK 771
           +M DVW NLAH+Y  Q  F+ A++MY+N +R F    D   L YLAR  ++     +CK+
Sbjct: 686 EMKDVWFNLAHIYVEQKQFSSAIQMYKNAMRTFDLQNDPDCLTYLARALFKNNLMDECKR 745

Query: 772 SLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSA 831
            L++A  +AP +  + ++  + MQ+ +   L  ++    EV   V +LE + R FS    
Sbjct: 746 CLIKARRVAPQDTVVLYNLALVMQQLAERKLTASKSNLKEVVGAVRDLELSERYFSW--- 802

Query: 832 ASNLHLHG----FDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEAARQAALAE 887
              L +HG    F           CK +L  A I+   A+  + + R  +E  + +    
Sbjct: 803 ---LQIHGDRTKFALTGAANEARKCKDILTQAHIYVNRAKLADDEERAHRERTQASVTQA 859

Query: 888 EARRKAEEQKK 898
             +RK  EQ++
Sbjct: 860 SQKRKQREQER 870


>gi|145345359|ref|XP_001417181.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144577408|gb|ABO95474.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 1059

 Score =  446 bits (1148), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 300/957 (31%), Positives = 481/957 (50%), Gaps = 66/957 (6%)

Query: 8   VQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQILEEGS 67
           + +  E V V LD LP D  D+  +L+AE APL+ W+ +   Y ++G    F  ++E   
Sbjct: 12  LNDPNECVVVDLDALPTDVEDVASVLQAELAPLEAWIEVTEAYLRRGDARGFETLMEMVC 71

Query: 68  SPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMH- 126
           +PEI+E Y +  Y R A+L     Y+      ET    +EE FI A  Y N+A+ I    
Sbjct: 72  APEIEEVYREQAYGRAAVLCLYASYWANRAARETDAVSREEGFIKAGAYLNQAAGIHRKP 131

Query: 127 EPSTWVGKGQLLLAKGEVEQASSAFKIVL---EADRDNVPALLGQACVEFNRGRYSDSLE 183
           E    +G+  L  A+G   +        L   +  RDN+  +L +A + + + RY D+L 
Sbjct: 132 EQIVAIGRAHLAFARGATGEGEKLIDQALGLKDDGRDNITPMLWKAVLLYKKERYQDALT 191

Query: 184 FYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQ 243
           +YKRAL+  PS P  +RLGIG C+YKLG    A+ AF R L+LD  NVEA++ LA+ +L 
Sbjct: 192 WYKRALRAFPSAPAPVRLGIGACQYKLGDFKTAKLAFARVLKLDERNVEAMLGLALCELS 251

Query: 244 ANEAA------GIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAV 297
            ++         +   M  ++RAF   P+     N ++++      +  VE+LT  AL  
Sbjct: 252 LHDIRSQQHLDSVAAAMRLLERAFMHDPHNQAVNNVISDNLLMADDYEKVEKLTRLALQN 311

Query: 298 TNHGP-TKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLG 356
               P  ++ + +N AR+ H++G   +A   Y+ +    N    ++ PY+GLGQ+ L  G
Sbjct: 312 NAETPRNRAKAAFNQARALHARGQVPQAQALYLTAT---NLDEHYVPPYFGLGQIALAKG 368

Query: 357 DFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDL 416
           D + A    +K    + ++    +   H+    G+ E+A E+ R+  K    D  A ++L
Sbjct: 369 DVKLAWNYMDKAHGEFGESMTVTRMFAHLCASTGRSEQAAEMFREVVKQGGNDVDAMLEL 428

Query: 417 GELLISSDTGAALDAFKTARTLLKKAGEEVPIEVL-NNIGVIHFEKGEFESAHQSFKDAL 475
           GELL + D  AAL A+  A  +L   GEE PI  + NNIGV++ + G+F+ A ++F +AL
Sbjct: 429 GELLETQDPKAALKAYSAALKMLAAKGEEGPITAIKNNIGVLNVQLGKFDEAREAFTEAL 488

Query: 476 GDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLL 535
                            +   A  L+ K      +                + FNLA L 
Sbjct: 489 ---------------QALGGDADQLEGKLKGAKAKKALQP-------GVAPIAFNLALLE 526

Query: 536 EQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNA 595
           EQ  +  AA   Y  IL    DY+D+ LR A I   R +  +++E  NEA+       +A
Sbjct: 527 EQQGNNAAAEARYDAILAAQPDYIDSILRQAKIRAERGDYDMALERTNEAIAAKSDSADA 586

Query: 596 LSMLGDLELKNDDWVKAKETFRA------------ASDATDGKDSYATLSLGNWNYFAAL 643
           L++ G + LK   W +A++ F A            A + T   D YA +S  N  Y++A+
Sbjct: 587 LALAGWVLLKAKRWSEAEQQFAALRNLPKPDAAANAKEKTLTHDEYAMVSAANAAYYSAI 646

Query: 644 ------RNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDL 697
                 RN+ +  K E  H E+A  L+ + + ++ SN+YAANG G++LAE+G+ D +K +
Sbjct: 647 KEGVLKRNDPKVLKREEEHYERAYSLFQKTLQKNGSNVYAANGLGIILAERGRIDEAKTV 706

Query: 698 FTQVQE--AASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLY 755
           F  VQE  AA GS+    PD+ IN  HVY A+  +  A K+Y+    +FY+N +  ++LY
Sbjct: 707 FQIVQEGMAAKGSI---NPDILINQGHVYLAKAQYVQASKLYERAQSQFYFNQNENVMLY 763

Query: 756 LARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTAD----- 810
            AR HYE    ++ +K L +A+ +AP N+ +RF+    +Q+ +  TL +T ++       
Sbjct: 764 QARAHYENGNLEEARKILRKALLIAPWNHRIRFNLAYVIQEMAQRTLNRTMKSTSSDGRL 823

Query: 811 -EVRSTVAELENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAERE 869
            +V S + +L  A+++F  L    N    GFD K+ + HV +CK  L  +K H EAA++E
Sbjct: 824 AQVESAIEDLTTALKLFEQLQTLGNQAEFGFDAKRTSVHVSFCKQALTKSKPHLEAAQKE 883

Query: 870 EQQNRQRQEAARQAALAEEARRKAEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVKAR 926
           E      + A   A  A E  R A++  + L ++   ++ +    Q E  F+  +AR
Sbjct: 884 EASISAAKNAQLTARRAIEEGRAAQKAAEELAKETHAKELEAIAAQSERRFKESQAR 940


>gi|449678121|ref|XP_002164299.2| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Hydra
           magnipapillata]
          Length = 1036

 Score =  444 bits (1142), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 284/856 (33%), Positives = 463/856 (54%), Gaps = 94/856 (10%)

Query: 67  SSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMH 126
           ++P ++  Y + + +++ +L++L  YY   G+ E +  +K E F  ATQ Y  A +I   
Sbjct: 76  ATPNLE--YKEYQQDQMVVLDSLAAYYVQAGRKEKEAEKKRELFTKATQLYTTADKI--- 130

Query: 127 EPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYK 186
                                     I+L+    N+PALLG+AC+ F +  Y  SL +YK
Sbjct: 131 --------------------------IMLDQSASNIPALLGKACISFQKKDYKASLAYYK 164

Query: 187 RALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANE 246
           +AL+ +P+CP  +RLG+G C Y+L ++ KAR AF+RAL L+   + ALV LA+++L + +
Sbjct: 165 KALRTNPNCPAEVRLGMGHCFYRLNRMEKARLAFERALALNSRCIGALVGLAILELNSKK 224

Query: 247 AAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSH 306
              I+ G++ + + + I    AM LN+LA HFFF   +  V+ L   A   T     ++ 
Sbjct: 225 PDSIKVGVQLLSKGYAIDSQNAMVLNHLAEHFFFKKDYAKVQHLALHAFHGTEVEAMQAE 284

Query: 307 SYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFE 366
           S Y+LARS+H +GDY++A  YY  +  + + P+ ++ P++GLGQ+ +  GD  +A   FE
Sbjct: 285 SCYHLARSFHVQGDYDQAFQYYYQAT-QFSAPN-YVLPWFGLGQMYIARGDTVNASQCFE 342

Query: 367 KVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKIDPRDAQAFIDLGELLISS 423
           KVL+  P+N ET+K LG +Y    + EK   A++ L+K  +  P D +A+I+L  +L  +
Sbjct: 343 KVLKHQPNNYETMKILGSLYSSSSEPEKRELAKKHLKKVTEQFPDDVEAWIELAGILEQA 402

Query: 424 DTGAALDAFKTARTLLKKAGE-EVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLT 482
           D  AAL A+  A  +LK+  E +VP E+LNN+G +HF  G    A + ++ A+      +
Sbjct: 403 DVQAALSAYGAASRILKEKVEADVPPEILNNVGALHFRLGNLNEAKKFYEVAMEHCKEES 462

Query: 483 LLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTV 542
           +   + +TY    S SM                             +N+ARL+E   +  
Sbjct: 463 M---QGETYYRAISVSM----------------------------QYNMARLMEAQFEFD 491

Query: 543 AASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDL 602
            A  +Y+ IL ++  YVD YLRL  +A+ +  +  + +    AL+++  +P+A +++G+L
Sbjct: 492 KAEKVYKDILREHPSYVDCYLRLGCMARDKGQIYEASDWFKMALQIDQDHPDAWTLIGNL 551

Query: 603 ELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAK 661
            L   +W   ++ F R         D+YA ++LGN  +   L    R    E  H E+A 
Sbjct: 552 HLAKQEWGPGQKKFERILKQPATSSDTYALVALGNV-WLQTLHTPLRDKSKEKRHQERAI 610

Query: 662 ELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLA 721
            ++ +V+     N+YAANG G VLA KG F  ++D+F+QV+EA +     ++PD+W+NLA
Sbjct: 611 AMFKQVLRIDQRNIYAANGIGCVLAHKGYFREARDVFSQVREATA-----EVPDIWLNLA 665

Query: 722 HVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAP 781
           HVY  Q  F  A++MY+NCL+KF+ +   +++ YLAR +Y+A + +DCK+ LL+  H+AP
Sbjct: 666 HVYVEQKQFVSAIQMYENCLKKFFKSYSVEVMFYLARAYYKAGRLEDCKELLLKTRHVAP 725

Query: 782 SNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHG-- 839
            +  L F+  +  Q+ + S L+  +     V S VA+LE A R F +LS       HG  
Sbjct: 726 HDTLLMFNLSLVQQRLATSVLRNEKSNLKTVLSAVADLELAQRNFDYLSR------HGDR 779

Query: 840 --FDEKKINTHVEYCKHLLDAAKIHREAAER---EEQQNRQRQ----EAARQAALAEEAR 890
             FD  +       C  LL  A+ H + A R   E Q+ R++Q    E  RQ  L  E++
Sbjct: 780 MKFDLAQARQEAGRCSDLLSQAQYHVQRARRIDEEAQEQRKKQDEERELLRQQQLEAESK 839

Query: 891 --RKAEEQKKYLLEKR 904
             ++ E +K+ LLEKR
Sbjct: 840 LNQQKEAEKQQLLEKR 855


>gi|26337079|dbj|BAC32223.1| unnamed protein product [Mus musculus]
          Length = 721

 Score =  434 bits (1116), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 269/748 (35%), Positives = 415/748 (55%), Gaps = 55/748 (7%)

Query: 4   VYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQIL 63
           + IP+++++E + +  DQLP +  +++ ILK E   L +W+ +A EY+KQGK E+F ++L
Sbjct: 6   IEIPLRDTDEVIELDFDQLP-EGDEVISILKQEHTQLHIWIALALEYYKQGKTEEFVKLL 64

Query: 64  EEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKAS 121
           E   +  ID    Y D   +++  L+ L  YY    + E  +  K++    AT  Y  A 
Sbjct: 65  E---AARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNKKDLITQATLLYTMAD 121

Query: 122 RIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSD 180
           +I M++ +  +G+    L +G+ ++QA + F  VL    +N+PALLG+AC+ FN+  Y  
Sbjct: 122 KIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPALLGKACISFNKKDYRG 181

Query: 181 SLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVM 240
           +L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF RAL+L+ + V ALV LAV+
Sbjct: 182 ALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALELNSKCVGALVGLAVL 241

Query: 241 DLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 300
            L   EA  I+ G++ + RA+ I P   M LN+LANHFFF   +  V+ L   A   T  
Sbjct: 242 QLNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNTEV 301

Query: 301 GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRS 360
              ++ S Y LARS+H + DY++A  YY  + +  +    F+ P++GLGQ+ +  GD  +
Sbjct: 302 EAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASS--SFVLPFFGLGQMYIYRGDKEN 359

Query: 361 ALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKIDPRDAQAFIDLG 417
           A   FEKVL+ YP+N ET+K LG +Y      EK   A+  L+K  +  P D +A+I+L 
Sbjct: 360 ASQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKVTEQYPDDVEAWIELA 419

Query: 418 ELLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALG 476
           ++L  +D   AL A+ TA R L +K   +VP E+LNN+G +HF  G    A + F     
Sbjct: 420 QILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYF----- 474

Query: 477 DGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWN--KVTVLFNLARL 534
               L  LD                        R + +  H E  +N   VT  +NLARL
Sbjct: 475 ----LASLD------------------------RAKAEAEHDEHYYNAISVTTSYNLARL 506

Query: 535 LEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPN 594
            E + +   A  LY+ IL ++ +YVD YLRL A+A+ + N   + +   EAL++N  +P+
Sbjct: 507 YEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEASDWFKEALQINQDHPD 566

Query: 595 ALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLE 653
           A S++G+L L   +W   ++ F R         D+Y+ L+LGN  +   L    R  + E
Sbjct: 567 AWSLIGNLHLAKQEWGPGQKKFERILKQPATQSDTYSMLALGNV-WLQTLHQPTRDREKE 625

Query: 654 ATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQM 713
             H ++A  +Y +V+     NLYAANG G VLA KG F  ++D+F QV+EA +      +
Sbjct: 626 KRHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHKGYFREARDVFAQVREATA-----DI 680

Query: 714 PDVWINLAHVYFAQGNFALAMKMYQNCL 741
            DVW+NLAH+Y  Q  +  A++M  + L
Sbjct: 681 SDVWLNLAHIYVEQKQYISAVQMVTSLL 708


>gi|320165966|gb|EFW42865.1| phosphoprotein [Capsaspora owczarzaki ATCC 30864]
          Length = 1153

 Score =  415 bits (1067), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 293/956 (30%), Positives = 488/956 (51%), Gaps = 86/956 (8%)

Query: 4   VYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQIL 63
           + IP++ S E + +   +LP D  D+L ILK E+A L +WL++A +Y+ Q   E   Q+L
Sbjct: 9   IEIPLRGSNEVLEIEFAELP-DLGDLLGILKQEKARLRIWLVLAIQYYNQKMPEACSQLL 67

Query: 64  EEGS-SPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFIL-ATQYYNKAS 121
              S +   +  YAD   +R++ILNALG +Y     +E + RE  E  +  AT  +N+A 
Sbjct: 68  TAASDAASTEPEYADAIQDRLSILNALGAFYLQQA-VEERDRETREALLQKATSQFNRAD 126

Query: 122 RIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDS 181
            +D+H     VGKG L L +   E+A++ F+ V   +  ++PAL+GQAC  +N  ++ ++
Sbjct: 127 TLDVHGTLNMVGKGMLFLLRNNYERAATQFRYVTAQNPAHIPALMGQACAAYNLKQFKEA 186

Query: 182 LEFYKRALQVHPSCPGAI-RLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVM 240
           L  Y+R L+++P+   AI R GIG+C +KL  L +A+ AF+R L+L P+++EA VALA +
Sbjct: 187 LGLYRRVLRINPTGSAAIVRYGIGVCLFKLKDLERAQLAFKRVLELVPDHLEACVALATI 246

Query: 241 D-------------------------------------LQANEAAGIRKGMEKMQRAFEI 263
           +                                     LQ    A +  GM+ +Q+A++I
Sbjct: 247 EFNTGVDKEASATEMLTGRSAATVANLAPAQISEQASILQQAAVASVTSGMQLLQQAYKI 306

Query: 264 YPY----CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 319
                   AM LN+L+N+FF   +      L  +AL  ++    K+ S Y + R +H+  
Sbjct: 307 SSEENRDNAMLLNHLSNYFFSYRELDKSANLALSALHRSDVDEIKAISCYLIGRKHHAAE 366

Query: 320 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 379
           DY++A  +Y  + +  +    F  P +GLGQ+ +K GD   A    EKVL  +PDN E  
Sbjct: 367 DYDQAFQFYYQANRLWDS---FALPQFGLGQLYIKKGDIAKAAEYLEKVLVKFPDNYEAS 423

Query: 380 KALGHIYVQL---GQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTAR 436
           K LG +YV      + ++AQ+LL K     P+D +A+I+L +L   +D  AAL+A++TA 
Sbjct: 424 KILGSLYVTSQYSNKRQRAQQLLHKITVAQPKDVEAWIELAQLQEQTDFAAALEAYETAA 483

Query: 437 TLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDAS 496
            LL +A  ++  E+LNNI  +  + G+                    LD         A+
Sbjct: 484 RLLLEADIKIAPEILNNIATLRHKLGQ--------------------LDKAQDMNAAAAA 523

Query: 497 ASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQ 556
               Q +D +  +   +  N   L   KVT+ +N ARLLE +++   A V+YR ++ ++ 
Sbjct: 524 DVDQQIRDEEQ-NEMVDAQNLRSLNGLKVTIRYNRARLLEDMNNPADAEVIYRELIQEHP 582

Query: 557 DYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF 616
             +D YLRLAAIAK +  +  + E V E   +    P+A   +G++ L   +W  A+  F
Sbjct: 583 TLIDCYLRLAAIAKNQGRIAAAAEWVREVFAIQPHNPDAWCFVGNMHLSRYEWNLAQNKF 642

Query: 617 R---AASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTS 673
                 +  T+  D Y  ++LGN    +A        +++ +++ +A E +T+ + + + 
Sbjct: 643 EMLLKNNGKTNKVDPYPLIALGNIFQQSAQPVSVPKAQMDKSYV-RAAEFFTKALQEDSR 701

Query: 674 NLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALA 733
           N+YAANG   V+AE G    ++D+F +V+E  S S      DVW NL H+Y +  ++  +
Sbjct: 702 NIYAANGLACVMAENGFVKEAEDVFLKVRETTSESA-----DVWTNLGHLY-SSYDYTRS 755

Query: 734 MKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVA 793
           +KMY NCLRKF+ + D  +L++LAR HY+ +++  CK  L +A HL P    +R+   + 
Sbjct: 756 VKMYTNCLRKFHNDKDLDVLMHLARVHYQFKKFDACKSVLQQAFHLHPHETVIRYHLALC 815

Query: 794 MQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCK 853
            + F+  T  +      +V   +A L+ A +++ +LS        GF   +         
Sbjct: 816 EEAFAEHTFAQETLHPRDVTHAIASLQVAHKIYDNLSKYPKSSRLGFTPARAAQSASRVA 875

Query: 854 HLL-DAAKIHR--EAAEREEQQNRQRQEAARQAALAEEARRKAEEQKKYLLEKRKL 906
            +L  +A++ R  EA E E Q+  Q  E  R+  +  +A  +A  Q K   E  +L
Sbjct: 876 DMLAQSAQVMRRAEAQEAERQRKAQEHEVLRKNLMERKAADEAVRQSKIAEEHARL 931


>gi|148685055|gb|EDL17002.1| Ctr9, Paf1/RNA polymerase II complex component, homolog (S.
           cerevisiae), isoform CRA_b [Mus musculus]
 gi|149068294|gb|EDM17846.1| SH2 domain binding protein 1 (tetratricopeptide repeat containing),
           isoform CRA_b [Rattus norvegicus]
          Length = 655

 Score =  391 bits (1005), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 245/689 (35%), Positives = 380/689 (55%), Gaps = 50/689 (7%)

Query: 4   VYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQIL 63
           + IP+++++E + +  DQLP +  +++ ILK E   L +W+ +A EY+KQGK E+F ++L
Sbjct: 6   IEIPLRDTDEVIELDFDQLP-EGDEVISILKQEHTQLHIWIALALEYYKQGKTEEFVKLL 64

Query: 64  EEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKAS 121
           E   +  ID    Y D   +++  L+ L  YY    + E  +  K++    AT  Y  A 
Sbjct: 65  E---AARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNKKDLITQATLLYTMAD 121

Query: 122 RIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSD 180
           +I M++ +  +G+    L +G+ ++QA + F  VL    +N+PALLG+AC+ FN+  Y  
Sbjct: 122 KIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPALLGKACISFNKKDYRG 181

Query: 181 SLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVM 240
           +L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF RAL+L+ + V ALV LAV+
Sbjct: 182 ALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALELNSKCVGALVGLAVL 241

Query: 241 DLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 300
           +L   EA  I+ G++ + RA+ I P   M LN+LANHFFF   +  V+ L   A   T  
Sbjct: 242 ELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNTEV 301

Query: 301 GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRS 360
              ++ S Y LARS+H + DY++A  YY  + +  +    F+ P++GLGQ+ +  GD  +
Sbjct: 302 EAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASS--SFVLPFFGLGQMYIYRGDKEN 359

Query: 361 ALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKIDPRDAQAFIDLG 417
           A   FEKVL+ YP+N ET+K LG +Y      EK   A+  L+K  +  P D +A+I+L 
Sbjct: 360 ASQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKVTEQYPDDVEAWIELA 419

Query: 418 ELLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALG 476
           ++L  +D   AL A+ TA R L +K   +VP E+LNN+G +HF  G    A + F     
Sbjct: 420 QILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYF----- 474

Query: 477 DGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWN--KVTVLFNLARL 534
               L  LD                        R + +  H E  +N   VT  +NLARL
Sbjct: 475 ----LASLD------------------------RAKAEAEHDEHYYNAISVTTSYNLARL 506

Query: 535 LEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPN 594
            E + +   A  LY+ IL ++ +YVD YLRL A+A+ + N   + +   EAL++N  +P+
Sbjct: 507 YEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEASDWFKEALQINQDHPD 566

Query: 595 ALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLE 653
           A S++G+L L   +W   ++ F R         D+Y+ L+LGN  +   L    R  + E
Sbjct: 567 AWSLIGNLHLAKQEWGPGQKKFERILKQPATQSDTYSMLALGNV-WLQTLHQPTRDREKE 625

Query: 654 ATHLEKAKELYTRVIVQHTSNLYAANGAG 682
             H ++A  +Y +V+     NLYAANG G
Sbjct: 626 KRHQDRALAIYKQVLRNDAKNLYAANGIG 654


>gi|405973169|gb|EKC37899.1| RNA polymerase-associated protein CTR9-like protein [Crassostrea
           gigas]
          Length = 679

 Score =  389 bits (1000), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 233/691 (33%), Positives = 378/691 (54%), Gaps = 46/691 (6%)

Query: 2   ACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQ 61
             + IP+++++E + + LDQLP +  ++L IL+ E APL +W+ +A EY+KQ  V+ F +
Sbjct: 3   GSIEIPLRDTDEVIELDLDQLP-EGEEVLSILRQEVAPLHIWVTLALEYYKQNYVQDFVK 61

Query: 62  ILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKAS 121
           IL+  S  +    Y +   +++  L+ L  YY   G  E  + +K E F  AT  Y  A 
Sbjct: 62  ILD-ASRTDAGLDYPNFERDQMRALDTLAAYYVQKGHKEKNKDKKRELFTQATLLYTTAD 120

Query: 122 RIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSD 180
           RI M++ +  +G+    L +G+ +EQA + F  VL    +N+P+LLG+AC+ FN+  Y  
Sbjct: 121 RIIMYDQNHLLGRAYFCLLEGDKMEQADAQFNFVLGQANNNIPSLLGKACIAFNKKDYRG 180

Query: 181 SLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVM 240
           +L +YK+AL+ + +CP ++RLG+G C  KL +L KAR AF+RALQLD + V AL+ LA++
Sbjct: 181 ALAYYKKALKTNHNCPASVRLGLGHCFVKLNRLEKARMAFERALQLDSQCVGALIGLAIL 240

Query: 241 DLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 300
           +L +     I+ G++ + +A+ I     M LN+LANHFF+   +  V+ L   +   T +
Sbjct: 241 ELNSKTQDSIKNGVQLLSKAYTIDSTNPMILNHLANHFFYKKDYQKVQHLALHSFHNTEN 300

Query: 301 GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRS 360
              ++ S Y LAR++H + DY++A  YY  S +    P  F+ P++GLGQ+ +  GD  +
Sbjct: 301 EGMRAESCYQLARAFHVQQDYDQAFQYYYQSTQ--FAPPNFVLPFFGLGQMYIYRGDNEN 358

Query: 361 ALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKIDPRDAQAFIDLG 417
           A T FEKVL+    N ET+K LG +Y       K   AQ+ L+K  +  P D +A+I+L 
Sbjct: 359 ASTCFEKVLKAQSGNYETMKILGSLYANSSDPAKRDIAQQHLKKVTEQFPDDVEAWIELA 418

Query: 418 ELLISSDTGAALDAFKTARTLLKKAGE-EVPIEVLNNIGVIHFEKGEFESAHQSFKDALG 476
           ++L   D   AL A+ TA  +LK+  E +VP E+LNN+  +HF  G  + A + ++ +L 
Sbjct: 419 QILEQQDVQGALSAYGTATRILKEKVEADVPPEILNNVAALHFRLGNLQEARKCYEASL- 477

Query: 477 DGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWN--KVTVLFNLARL 534
                                            R  ++  H E  ++   VT  +NLARL
Sbjct: 478 --------------------------------ERSRSEAQHDETYYSAISVTTTYNLARL 505

Query: 535 LEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPN 594
            E  H+   A  LY+ IL  + +YVD YLRL  +A+ R  +  + +   EAL++N  +P+
Sbjct: 506 YEATHEYDDAERLYKSILRDHPNYVDCYLRLGCMARERGQIYEASDWFKEALQINQDHPD 565

Query: 595 ALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLE 653
           A S++G+L L   +W   ++ F R         D+Y+ ++LGN  +   L    R    E
Sbjct: 566 AWSLIGNLHLAKQEWGPGQKKFERIIGRPNTKDDAYSLIALGNV-WLQTLHTPMRDKDKE 624

Query: 654 ATHLEKAKELYTRVIVQHTSNLYAANGAGVV 684
             H E+A  +Y +V+     N++AANG  ++
Sbjct: 625 KRHQERALAMYKQVLRNDDRNIWAANGIVLI 655



 Score = 46.2 bits (108), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 93/458 (20%), Positives = 183/458 (39%), Gaps = 84/458 (18%)

Query: 357 DFRSALTNFEKVLEIYPDNCETLK-ALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFID 415
           D+R AL  ++K L+   +   +++  LGH +V+L ++EKA+    +A ++D +   A I 
Sbjct: 177 DYRGALAYYKKALKTNHNCPASVRLGLGHCFVKLNRLEKARMAFERALQLDSQCVGALIG 236

Query: 416 LGELLISSDTGAALDAFKTARTLLKKA---GEEVPIEVLNNIGVIHFEKGEFES----AH 468
           L  L ++S T    D+ K    LL KA       P+ +LN++    F K +++     A 
Sbjct: 237 LAILELNSKTQ---DSIKNGVQLLSKAYTIDSTNPM-ILNHLANHFFYKKDYQKVQHLAL 292

Query: 469 QSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVL 528
            SF +   +G+       + ++    A A  +Q    Q F  +         P N V   
Sbjct: 293 HSFHNTENEGM-------RAESCYQLARAFHVQQDYDQAFQYYYQSTQFA--PPNFVLPF 343

Query: 529 FNLARLLEQIHDTVAASVLYRLILF----------------------------------- 553
           F L ++     D   AS  +  +L                                    
Sbjct: 344 FGLGQMYIYRGDNENASTCFEKVLKAQSGNYETMKILGSLYANSSDPAKRDIAQQHLKKV 403

Query: 554 --KYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKY------PNALSMLGDLELK 605
             ++ D V+A++ LA I + + ++Q ++     A ++  +       P  L+ +  L  +
Sbjct: 404 TEQFPDDVEAWIELAQILE-QQDVQGALSAYGTATRILKEKVEADVPPEILNNVAALHFR 462

Query: 606 NDDWVKAKETF-----RAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATH-LEK 659
             +  +A++ +     R+ S+A   +  Y+ +S+      A L         EATH  + 
Sbjct: 463 LGNLQEARKCYEASLERSRSEAQHDETYYSAISVTTTYNLARL--------YEATHEYDD 514

Query: 660 AKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWIN 719
           A+ LY  ++  H + +      G +  E+GQ   + D F +  +     +    PD W  
Sbjct: 515 AERLYKSILRDHPNYVDCYLRLGCMARERGQIYEASDWFKEALQ-----INQDHPDAWSL 569

Query: 720 LAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLA 757
           + +++ A+  +    K ++  + +     DA  L+ L 
Sbjct: 570 IGNLHLAKQEWGPGQKKFERIIGRPNTKDDAYSLIALG 607


>gi|268573518|ref|XP_002641736.1| Hypothetical protein CBG10075 [Caenorhabditis briggsae]
          Length = 1143

 Score =  382 bits (982), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 265/909 (29%), Positives = 481/909 (52%), Gaps = 62/909 (6%)

Query: 4   VYIPVQNSEEE--VRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQ 61
           + IP+++S+E+  + +   +LP D +++L IL+AE+A L  W+ +A EYF+Q +V+ F +
Sbjct: 14  IAIPLKDSQEDEVIEINCSELP-DGAEVLSILEAEEAKLSYWIEVALEYFRQDRVQPFME 72

Query: 62  ILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKAS 121
           ILE   +    EY   V+ +++  L+ L  Y+   G  E  + +K++ F  AT  +N A 
Sbjct: 73  ILEAAGTRAGLEYDG-VKQDQMRALDILAAYWMTQGYRERAKDKKQDFFSKATVLFNTAD 131

Query: 122 RIDMHEPSTWVGKGQLLL-----AKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 176
           +I M+E S    +    L     +  + E A   F  V++    NV  L+G+A + FN+ 
Sbjct: 132 KIAMYEWSHLTVRAWFYLFERDKSTNKYELADQQFNYVVKTYPQNVLPLIGKAVIAFNKK 191

Query: 177 RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVA 236
            Y  ++ ++++A++        +R+GIG C  K+G + K++ AF+RAL+L+P+NV A+  
Sbjct: 192 DYKTAIFYFRKAIRQRRYSIADLRVGIGYCFAKMGLVDKSKLAFERALELEPDNVSAMCG 251

Query: 237 LAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALA 296
           L ++ L   E   ++  +    RA+   P   +AL +LANHFFF G+     QL+  A A
Sbjct: 252 LGIILLNTLEQDNLKIAVNLFGRAYHAQPDQPVALVHLANHFFFKGEVERAWQLSWHA-A 310

Query: 297 VTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLG 356
             +    K+ ++Y + R  H++G Y+ A  YY  + +  N+ H     +YGLGQ+ +   
Sbjct: 311 SNDCDSIKAEAFYQMGRCRHTQGQYDGAYKYYYQARQANNQEH--TLAHYGLGQMYIHRN 368

Query: 357 DFRSALTNFEKVLEIYPDNCETLKALGHIY--VQLGQI-------EKAQELLRKAAKIDP 407
           +   A+  FE V +  P N +T+K LG +Y  VQL          +K +++L K   I+ 
Sbjct: 369 EIEEAIKCFEVVHQRLPHNTDTMKILGSLYAHVQLADPARTNEARQKGRDVLAKYLNIEA 428

Query: 408 RDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPI--EVLNNIGVIHFEKGEFE 465
            D +A IDL +LL S+D+  +L+ ++ A  LL+ A E++P   E+LNN+G +H    +F+
Sbjct: 429 EDCEACIDLAQLLESTDSKKSLELYERAIDLLE-AFEQIPPQPEMLNNVGALHMSMKQFD 487

Query: 466 SAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKV 525
            A   FK A              ++     S+   QF D     R   + +H+      +
Sbjct: 488 KAEHYFKKA-------------KESLEEQLSSEAAQFSD----RRAAPERSHL------L 524

Query: 526 TVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEA 585
           T+ +NLAR LE +  T  A  +Y+ I+ +   Y D YLRL  IA+ R+ +  +     + 
Sbjct: 525 TIRYNLARCLEHLCRTSEAEQMYKDIISECPGYTDGYLRLGCIARDRHQVYEASLSFKQG 584

Query: 586 LKVNGKYPNALSMLGDLELKNDDWVKAKETFR-AASDATDGK--DSYATLSLGNWNYFAA 642
           ++ +   P   +++G+L    ++W+ A++ F    S   + K  D Y+ ++LGN  +   
Sbjct: 585 VQFDQSSPVVWTLIGNLHYAKNEWMPAQKKFEFILSKIYNNKTPDPYSLVALGNV-WIEQ 643

Query: 643 LRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQ 702
           L N  R  + E  ++++A ++Y + +     N+YAANG G VLA K  ++ ++D+F+QV+
Sbjct: 644 LLNPSRKKEDEKKYMDRALQMYQKALKLEPKNMYAANGIGCVLAYKRNWNDARDVFSQVR 703

Query: 703 EAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYE 762
           E+ S     +  DVW+N+AHV+  +  +  A++MY + ++KF    DA +L YLA+ +Y 
Sbjct: 704 ESTS-----EFYDVWMNIAHVFMEREQWMSAVQMYSSAMKKFRKENDAMLLHYLAKAYYR 758

Query: 763 AEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENA 822
           A    + K++L RA+     N  L+F+  + ++K +   L+  + T+ +V + +++L  A
Sbjct: 759 ANMLSEAKEALERAMLDQLDNTQLKFNYAIVLKKSAKEILRGHKMTSQQVNTAISDLTFA 818

Query: 823 VRVFSHLSA-----ASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQ 877
            ++F ++S      AS+  +        +   + C+ LL  AK    AA+ ++++ R+  
Sbjct: 819 EKIFQYISKNDDRQASHTGMR-ISRTACSEEAKNCRDLLTQAKHKLAAAQTQDEEERRLI 877

Query: 878 EAARQAALA 886
           E   +  +A
Sbjct: 878 EKQEKEKIA 886


>gi|303276779|ref|XP_003057683.1| PAF1 complex protein Ctr9 [Micromonas pusilla CCMP1545]
 gi|226460340|gb|EEH57634.1| PAF1 complex protein Ctr9 [Micromonas pusilla CCMP1545]
          Length = 782

 Score =  376 bits (966), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 266/801 (33%), Positives = 415/801 (51%), Gaps = 88/801 (10%)

Query: 3   CVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQI 62
            +YIP+ ++ E V VA++ LP D  +IL IL+AE APLD+WL +A+ Y  +GK EQFR I
Sbjct: 2   TIYIPIGDTNEAVEVAVNDLPDDEGEILGILQAELAPLDVWLHVAKAYLSKGKEEQFRNI 61

Query: 63  LEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASR 122
           LEE + PEI+ YY D + ER AIL  L  Y+  +GK E  +  +++HF  A      A  
Sbjct: 62  LEEATQPEIETYYPDSKCERTAILCTLASYHVNMGKAENDKIRRDDHFYKADGLLRAAEL 121

Query: 123 I----DMHEP--STWVGKGQLLLAKGEV---EQASSAFKIVLEADRDNVPALLGQACVEF 173
           I    +  EP  +  VG+  L LAKG +   E+   A + + +    NV  LL +A + +
Sbjct: 122 IKQKANGEEPEQAPVVGRAHLELAKGNLAAAEKLVDAARSLKDGGAGNVLPLLMKARLLY 181

Query: 174 NRGRYSDSLEFYKRALQVH-PSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 232
           +RG+++++L++Y+RAL+    + P  +RLGIG C+Y+LG    AR AF+R +QL+P NV+
Sbjct: 182 DRGQFAEALQWYRRALRSQGAAAPAGVRLGIGACQYQLGNFEGARLAFERTIQLEPTNVD 241

Query: 233 ALVALAVM-DLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFL--VEQ 289
           ALV LA + D + N  A +++G+E ++RAF + P+   A   LA HF + G   L  +EQ
Sbjct: 242 ALVGLASLADAKTNYVAAVKRGLELLERAFTLDPHHPGAQVELAKHFLYAGDDNLQAIEQ 301

Query: 290 LTET-----ALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFP 344
           LTET     A A+ +    ++ +    A+++HS+G+ ++A   Y A+ +     HE   P
Sbjct: 302 LTETLIRGGADAIGSTPRLRAQAAMTRAKAHHSRGELQRAQGLYQAAAQMDETFHE---P 358

Query: 345 YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAK 404
            +GL QV L  GD ++ALT  E+    +P++ E  +  GH                KA +
Sbjct: 359 NFGLAQVALTRGDNKAALTYAERAYAAFPNSVEVQRVYGHCRRIADDAAAMNGGGGKAVE 418

Query: 405 IDPRDAQAFIDLGE-LLISSDTGAALDAFKTARTLLKKAGEE------VPIEVLNNIGVI 457
            DP D  A I+ G+ LL + +  AAL A++ A  +L   G++      +   +LNN+GV+
Sbjct: 419 ADPYDYDAQIEHGDALLAAREYEAALAAYEGAVEILNNGGKKADGTSTISSSLLNNVGVL 478

Query: 458 H-FEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGN 516
               KG   + H+               D++        +A+  +    +     +    
Sbjct: 479 KAMTKG--AAGHE---------------DTRAVFLAALEAAAKEEGGKGEKGEALDEPAE 521

Query: 517 HVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQ 576
             +    ++ V FNLARL E+  D   A+  Y  +L    +  +  LR AA+A  R N  
Sbjct: 522 RRKATGARLQVAFNLARLSEEKGDIEDATARYDDLLVASPEMTECLLRKAAMAAKRENFA 581

Query: 577 LSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFR-------------AASDAT 623
            + +   +AL+     P+A++ +G + +K   W +A+  F+             AA  A 
Sbjct: 582 AAEQFARKALETKPDDPDAMASVGHVLMKQSRWSEAQAQFKALRNLPKKLTPTQAALSAA 641

Query: 624 DGKDS---------YATLSLGNWNYFAALR-----NEKRA-PKL---EATHLEKAKELYT 665
            GKD          YA LSL N  Y+ A++     N KR  PK+   E  HL+ A  LYT
Sbjct: 642 AGKDPNAATHQHDEYAMLSLANAAYYQAVKLQSSVNHKRGDPKVREAEQAHLDYATTLYT 701

Query: 666 RVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQE---AASG--------SVFVQMP 714
           + + ++ S++YAANG G++LAEKG+ D +K  F  V E   AA+G        S  +  P
Sbjct: 702 KALQKNCSDMYAANGLGILLAEKGRIDEAKATFQMVAEGITAATGKGAEGAADSSLMSSP 761

Query: 715 DVWINLAHVYFAQGNFALAMK 735
           D+WIN  HV  A+GN+  A K
Sbjct: 762 DIWINQGHVQMAKGNYVAAAK 782


>gi|74213733|dbj|BAC39065.2| unnamed protein product [Mus musculus]
          Length = 622

 Score =  372 bits (956), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 230/643 (35%), Positives = 358/643 (55%), Gaps = 49/643 (7%)

Query: 4   VYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQIL 63
           + IP+++++E + +  DQLP +  +++ ILK E   L +W+ +A EY+KQGK E+F ++L
Sbjct: 6   IEIPLRDTDEVIELDFDQLP-EGDEVISILKQEHTQLHIWIALALEYYKQGKTEEFVKLL 64

Query: 64  EEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKAS 121
           E   +  ID    Y D   +++  L+ L  YY    + E  +  K++    AT  Y  A 
Sbjct: 65  E---AARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNKKDLITQATLLYTMAD 121

Query: 122 RIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSD 180
           +I M++ +  +G+    L +G+ ++QA + F  VL    +N+PALLG+AC+ FN+  Y  
Sbjct: 122 KIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPALLGKACISFNKKDYRG 181

Query: 181 SLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVM 240
           +L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF RAL+L+ + V ALV LAV+
Sbjct: 182 ALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALELNSKCVGALVGLAVL 241

Query: 241 DLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 300
           +L   EA  I+ G++ + RA+ I P   M LN+LANHFFF   +  V+ L   A   T  
Sbjct: 242 ELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNTEV 301

Query: 301 GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRS 360
              ++ S Y LARS+H + DY++A  YY  + +  +    F+ P++GLGQ+ +  GD  +
Sbjct: 302 EAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASS--SFVLPFFGLGQMYIYRGDKEN 359

Query: 361 ALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKIDPRDAQAFIDLG 417
           A   FEKVL+ YP+N ET+K LG +Y      EK   A+  L+K  +  P D +A+I+L 
Sbjct: 360 ASQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKVTEQYPDDVEAWIELA 419

Query: 418 ELLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALG 476
           ++L  +D   AL A+ TA R L +K   +VP E+LNN+G +HF  G    A + F     
Sbjct: 420 QILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYF----- 474

Query: 477 DGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWN--KVTVLFNLARL 534
               L  LD                        R + +  H E  +N   VT  +NLARL
Sbjct: 475 ----LASLD------------------------RAKAEAEHDEHYYNAISVTTSYNLARL 506

Query: 535 LEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPN 594
            E + +   A  LY+ IL ++ +YVD YLRL A+A+ + N   + +   EAL++N  +P+
Sbjct: 507 YEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEASDWFKEALQINQDHPD 566

Query: 595 ALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGN 636
           A S++G+L L   +W   ++ F R         D+Y+ L+LGN
Sbjct: 567 AWSLIGNLHLAKQEWGPGQKKFERILKQPATQSDTYSMLALGN 609


>gi|255081975|ref|XP_002508206.1| PAF1 complex protein [Micromonas sp. RCC299]
 gi|226523482|gb|ACO69464.1| PAF1 complex protein [Micromonas sp. RCC299]
          Length = 1262

 Score =  372 bits (954), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 288/1017 (28%), Positives = 467/1017 (45%), Gaps = 173/1017 (17%)

Query: 4    VYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQIL 63
            +Y+P+  +EE V + +D LP D S++L +L+ E APLD+WL IA+ Y +QGK E F  IL
Sbjct: 14   IYVPIGQTEEAVALPVDDLPDDPSEVLVLLQQEFAPLDIWLDIAKAYLQQGKEENFHAIL 73

Query: 64   EEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRI 123
               +  EI+EYY D +YER  IL  L  YY  + K E+ Q  + E    A +  +KA  +
Sbjct: 74   SNATEDEIEEYYPDSQYERSCILCTLASYYVNIAKGESDQINRVELLTKAEKLIDKADLL 133

Query: 124  DMH------EPSTWVGKGQLLLAKG---EVEQASSAFKIVLEADRDNVPALLGQACVEFN 174
              H      E    V +  L  AKG   + E+     + + +  +DN+  +L +A + F 
Sbjct: 134  WQHKRREDREQMPCVSRAHLEFAKGNAIDAEKLLDEARGLKDGGKDNIGPMLWKALLLFK 193

Query: 175  RGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEAL 234
            R + +D+L++YKRAL++HP     +RLGIG C  +LG    AR AFQRAL L+PEN +AL
Sbjct: 194  RDQVADALQWYKRALRMHPGADAGVRLGIGACNLRLGNFEHARLAFQRALDLEPENPDAL 253

Query: 235  VALAVMDLQ------------------------------ANEAAGIRKGMEKMQRAFEIY 264
            + LA  +L                                   A +++G+E ++RAF   
Sbjct: 254  LGLAQCELNEFTPVPESLLHGGDEDTDPASVEEKMEAAAETYTAAVQRGLELLRRAFNAD 313

Query: 265  PYCAMALNYLANHFFFTGQHFLVEQLTETAL--AVTNHGPT---KSHSYYNLARSYHSKG 319
            P+       LA HF        V+ LT+  +    TN   T   ++ + Y  AR +H  G
Sbjct: 314  PHHPAVNVALAQHFLIKKDGASVDHLTDKLVRGTSTNELATPRLRAEAAYVRARLHHQDG 373

Query: 320  DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 379
              ++A   Y A+V+       F    +GL QV L  GD +S++   E+    YPD+   L
Sbjct: 374  KLDRAEAMYTAAVQ---MDESFAAAAFGLAQVYLAKGDHKSSMLYAERAYAAYPDSVPVL 430

Query: 380  KALGHIYVQ----------------------LGQIEKAQELLRKAAKIDPRDAQAFIDLG 417
            K  GH+  +                       G+ ++   +L+K  + DP D +A ++LG
Sbjct: 431  KLYGHLRRKQDAAAAAAGGAGLVSVGTFGAGAGRDKETARILKKVVEADPADLEARLELG 490

Query: 418  E-LLISSDTGAALDAFKTARTLL-----KKAGEEVPIEVLNNIGVIHFEKGE-FESAHQS 470
            + LL S D   AL A++ A  +         G + P  +LNN  V+    G+ ++ A   
Sbjct: 491  DALLASGDYIGALGAYEMAVKIFGDRARNGKGPDAPAALLNNCAVLCAMTGKNYDKAKSL 550

Query: 471  FKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFN 530
            F  AL                     AS  +    +   + +      +   +   + FN
Sbjct: 551  FLRAL--------------------EASAAEEGGKKTGEQLDAQNERKKAAKSAQPIAFN 590

Query: 531  LARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNG 590
            LA L E       A+  Y  +L   +   +  LR AA+A  + +   ++EL  EA +   
Sbjct: 591  LAHLDEDFGYVKEANDRYGDLLDANEGMTECLLRRAAMAARQEDFDKAMELAKEATERRP 650

Query: 591  KYPNALSMLGDLELKNDDWVKAKETFR---------AASD------------ATDGKDSY 629
               +A + +G L +K + + +A+E F+         +A D             T   D Y
Sbjct: 651  DDVDAAAYVGHLLMKQEKYKEAQEQFKRLREMPKKLSAEDAARRAAAGKTDPVTHTSDEY 710

Query: 630  ATLSLGNWNYFAALRNE------KRAPK------LEATHLEKAKELYTRVIVQHTSNLYA 677
            A +S  N  Y+ A++ +      K  P+      LE  HL++A+  YT+ + +  SNLYA
Sbjct: 711  ALISSANAAYYQAVKAQAGAKLVKSGPEREKWRNLEKEHLKQAELYYTKALQKSGSNLYA 770

Query: 678  ANGAGVVLAEKGQFDVSKDLFTQVQE--------------------AASGSVFVQMPDVW 717
            ANG G++LAEKG+ D +K  F  V E                    A +    +  PD+W
Sbjct: 771  ANGLGILLAEKGKIDEAKRTFQMVAEGLMSLGGGDHSKDDGTEDSDANANKDMLTSPDIW 830

Query: 718  INLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAI 777
            IN  H+  A+GN+  A + Y+   ++F++  D ++ LY AR HYEA   ++ K +L RA+
Sbjct: 831  INQGHIQMAKGNYVAAARNYEQAQQRFFFGMDPRVALYQARNHYEANNMEEAKVTLKRAL 890

Query: 778  HLAPSNYTLRFDAGVAMQKFSASTLQKTRRTAD-------------EVRSTVAELENAVR 824
            H+AP ++ LRF+     Q+ +  TL +T + A+             +V + + + + A++
Sbjct: 891  HVAPWDHRLRFNLAYVYQEHAHRTLNRTLKGAEKGKQQGEGEGRLAQVLNAIEDFKLALQ 950

Query: 825  VFSHLSAA-----------SNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREE 870
            +F  + A            S     G D+K++  H+++C   L  ++ H EAA+ EE
Sbjct: 951  LFQQIQAVLQADKQKEGKKSLAQEIGIDKKRLGMHIQFCNKALTDSQPHLEAAKAEE 1007


>gi|341877740|gb|EGT33675.1| hypothetical protein CAEBREN_09711 [Caenorhabditis brenneri]
          Length = 1297

 Score =  370 bits (951), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 256/893 (28%), Positives = 460/893 (51%), Gaps = 68/893 (7%)

Query: 9    QNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQILEEGSS 68
            +N EE + + +  LP +  ++L IL+AE+A L  W+ +A EY++QG+V+ F  ILE   S
Sbjct: 171  ENREEVIEINITDLP-EGEEVLTILEAEEAKLSYWIEVALEYYRQGRVDPFMTILESAGS 229

Query: 69   PEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEP 128
                EY   V+ +++  L+ L  Y+   G  E  + +K++ F  AT  +N A +I M+E 
Sbjct: 230  RAGLEYIG-VKQDQMRALDILAAYWMTQGYREKTKDKKQDFFSKATVLFNTADKIAMYEW 288

Query: 129  STWVGKGQLLL-----AKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLE 183
            S    +    L     +  + E A   F  V++    NV  L+G+A + FN+  Y  ++ 
Sbjct: 289  SHLTVRAWFYLFERDKSTNKYELADQQFNYVVKTYPQNVLPLIGKAVIAFNKKDYKTAVY 348

Query: 184  FYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQ 243
            F+++A++        +R+GIG C  KLG + KA+ AFQRAL+++ ENV A+  L ++ + 
Sbjct: 349  FFRKAIRQRHHSIADLRVGIGHCYAKLGFMDKAKLAFQRALEIESENVSAMCGLGIILMN 408

Query: 244  ANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPT 303
              + A +   ++   +++ +     +AL +LANHFFF G+       TE A  +  H  T
Sbjct: 409  TLDPANLHAAVKLFGKSYNLQADHPVALVHLANHFFFKGE-------TERAWTLAWHAAT 461

Query: 304  -------KSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLG 356
                   K+ ++Y + R  HS+G YE A  YY  + +  N  H     +YGLGQ+ +   
Sbjct: 462  FNECDSIKAEAFYQMGRCRHSQGQYEGAYKYYYQARQANNGEH--TLAHYGLGQMYIHRN 519

Query: 357  DFRSALTNFEKVLEIYPDNCETLKALGHIYVQLG---------QIEKAQELLRKAAKIDP 407
            +   A+  FE V +  P+N +T+K LG +Y  +            +K +E+L K   ++ 
Sbjct: 520  EIEDAIKCFETVHQRLPNNVDTMKILGSLYANVQYNDQTQTNEARQKGREVLAKYLTLEN 579

Query: 408  RDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP-IEVLNNIGVIHFEKGEFES 466
             D +A IDL +LL +SD   AL+ +++A +LL+   +  P  E+LNN+G ++    +++ 
Sbjct: 580  EDYEACIDLAQLLEASDPKKALELYQSAISLLEGLEQIQPQPEMLNNVGALYMSMKQYDK 639

Query: 467  AHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVT 526
            A + FK A            K +   + ++    Q     L  R   +  H+      +T
Sbjct: 640  AEEHFKKA------------KERLEDLLSTEEGAQL----LSRRTPPEKTHL------LT 677

Query: 527  VLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEAL 586
            + +NLAR LE +  T  A  +Y+ I+ +   Y+D YLRL  I + R+ +  S   + E++
Sbjct: 678  IRYNLARCLEHLCRTSEAEQMYKDIVNECPGYIDGYLRLGCITRDRHQVYDSSLWLKESV 737

Query: 587  KVNGKYPNALSMLGDLELKNDDWVKAKETFR-AASDATDGK--DSYATLSLGNWNYFAAL 643
            + +   P   +++G+L     +W+ A++ F    S   + K  D Y+ ++LGN  +F  L
Sbjct: 738  RFDQSSPVVWTLIGNLHFSKSEWMPAQKKFEFILSKIYNNKTPDPYSLVALGNV-WFEQL 796

Query: 644  RNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQE 703
             N  R  + E  ++++A ++Y + +     N+YAANG G VLA K  ++ ++D+F+QV+E
Sbjct: 797  LNPSRKKEDEKKYIDRALQMYQKALKLQPKNMYAANGIGCVLAYKRNWNDARDVFSQVRE 856

Query: 704  AASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEA 763
            + S     +  DVW+N+AHV   +  +  A++MY + ++KF    D+ +L YLA+ +Y A
Sbjct: 857  STS-----EFYDVWLNIAHVCMEREQWMAAVQMYSSAMKKFKKEADSVLLHYLAKAYYRA 911

Query: 764  EQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAV 823
                + K++L  A+     N  L+F+  + ++K +   L+  + T+ +V   + +L  A 
Sbjct: 912  NMLNEAKEALEIAMLDHLDNIQLKFNYAIVLKKMAKEVLRGQKMTSKQVNCAIQDLTFAE 971

Query: 824  RVFSHLSAASNLHLHGFDEKKINT----HVEYCKHLLDAAKIHREAAEREEQQ 872
            ++F ++S   +   H    +   T      + CK LL  A     AA+ ++++
Sbjct: 972  KIFDYISKNDDRQSHHSGMRISRTICSEEAKNCKDLLTQANHKLTAAQSQDEE 1024


>gi|301117386|ref|XP_002906421.1| RNA polymerase-associated protein CTR9 [Phytophthora infestans T30-4]
 gi|262107770|gb|EEY65822.1| RNA polymerase-associated protein CTR9 [Phytophthora infestans T30-4]
          Length = 1166

 Score =  360 bits (924), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 290/1033 (28%), Positives = 485/1033 (46%), Gaps = 152/1033 (14%)

Query: 6    IPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQILEE 65
            IPV+NSE+ V V +D+LP D +DI+DIL+AE APLD+WL  A EY+ QG V QF++IL  
Sbjct: 16   IPVKNSEQAVEVFVDELPEDVNDIIDILRAEVAPLDVWLQFAVEYYNQGHVAQFQEILAV 75

Query: 66   GSSPEIDEYYAD--VRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRI 123
             S P I+E Y D   R  RI    AL  +       E  ++++E     A  ++ +A R+
Sbjct: 76   ASEPGIEEIYKDNASRMCRIKFFIALASHAVNAMWNEEDEKKREAISQRAVGFFQRADRL 135

Query: 124  DMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLE 183
            D   P T VGK  + +AK E ++A    K VL +++ N+PA+LG+A + + + +Y D+ +
Sbjct: 136  DHQHPMTLVGKALMFMAKNEDDRADRFIKSVLISNKTNLPAILGKALLLYRKKQYKDAKK 195

Query: 184  FYKRALQVHPSCPGA--IRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMD 241
             Y  A+++HP  P A  +R+    C Y LG + KAR   +    LD  NV+A++A A+  
Sbjct: 196  LYLEAIKLHPRSPQAANMRMCFAYCCYHLGAVEKARAVMKYTASLDETNVDAVIASALWQ 255

Query: 242  L--QANE--AAGIR----KGMEKMQRAFEIYPYCAMALNYLANHFF-------------- 279
            L  Q+ E  A  IR    + M  +  A  I       LN+LANH+F              
Sbjct: 256  LASQSREERAVSIRDESSRFMIMIHHAHAIDKTNPTVLNHLANHYFSQWIPLPCTVSVVR 315

Query: 280  ---------------FTGQHFLV------------EQLTETALAVTNHGPTKSHSYYNLA 312
                             GQ   +            + ++ + L +      +S +  N+A
Sbjct: 316  GSAVVATSKDISSEVSPGQIICIGDKYVAYISRDEDAVSSSGLKLDGPYRDESATATNIA 375

Query: 313  RSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIY 372
            R  + K        ++   + EI     ++     +G+     G ++ A + +     ++
Sbjct: 376  RKDYDKMFTLAGNAFHSTKIPEIRSESCYL-----MGRGCHAQGKYKDAYSYYFNAGRLW 430

Query: 373  PDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPR------------------------ 408
            P        L  +Y +  +  KA   L KA K  P                         
Sbjct: 431  PKFVLPWFGLAQMYYERKEFTKAASYLEKANKAYPENVEILSLLGDVYGKLGKKDEAVVL 490

Query: 409  ----------DAQAFIDLGELLISS----DTGAALDAFKTARTLLKKAGEEVPIEVLNNI 454
                      + +A I   ELL  S    D   A+ ++  A  ++  A E VP+EV  N+
Sbjct: 491  LRRVVELEPGNVEALIGTAELLHGSPERKDQIIAISSYIAAEKVMNNASERVPMEVYVNL 550

Query: 455  GVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFEND 514
            GV+    G+   A   FK AL              T + D S++  + K  +     E  
Sbjct: 551  GVLQQRVGKTSDAITCFKKAL--------------TQLGDDSSANEESKSEEADALAEEA 596

Query: 515  GNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNN 574
                    N +T+L+N+ R+ E++ +   A  LY +IL  +  Y D  LRL  + + R  
Sbjct: 597  STPKPTEAN-ITILYNMGRVYEEMGNRDRAKKLYDVILEVFPRYTDCLLRLGCMLRDRGQ 655

Query: 575  LQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGK-DSYATLS 633
               +I+  ++ L+V+     A  + G++ LK  +WV A++ +         K D YA LS
Sbjct: 656  EAEAIKTFDKVLEVDPTCAEACLLQGNIYLKKREWVFAQKKYEKVMGMPGLKNDPYAFLS 715

Query: 634  LGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDV 693
            +GN  + + L  + R  K    ++  ++  Y + +  H  N+YAANG G+++AEKG F++
Sbjct: 716  MGNI-FMSNLGEKNRYTK----NMSLSEVYYKKTLASHPHNIYAANGLGIMIAEKGNFEL 770

Query: 694  SKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQIL 753
            +K +F+QV+EA+       MPD WINLAH++ A+  +  A+++Y  CL K Y   D ++L
Sbjct: 771  AKQIFSQVREASP-----DMPDAWINLAHIFVAEERYQEAIQLYTVCLTKCYQGQDLEVL 825

Query: 754  LYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQK----TR--- 806
            LYLA+ +YE++ +  C  +L RA+H+ P++  L ++ G+A + ++  TL +    TR   
Sbjct: 826  LYLAKAYYESKDFPSCIATLSRALHMYPNDLRLWYNTGLAQEDYAVMTLGQETTVTRSGS 885

Query: 807  -------RTADEVRSTVAELENAVRVFSHL-----------SAASNLHLHG--FDEKKIN 846
                   RT  +V+  + +L+ A R+F  L           ++    H +   FD++K++
Sbjct: 886  GSAVPQLRTMADVQRAILDLKRAQRIFRFLLQQSEASASSSNSEKKKHHNSLPFDKEKVS 945

Query: 847  THVEYCKHLLDAAKIHREAAEREEQQNRQRQEAARQAALAEEARRKAEEQKKYLL--EKR 904
             H ++C   L  A  H E  ER++++ R+ +  A++  L E   R A EQ++  +  E  
Sbjct: 946  DHEKFCGDTLTKASYHLE-FERQKEEKRRLEIEAQRKLLREYEERVAREQEEVRVKEEDT 1004

Query: 905  KLEDEQKRLRQQE 917
            +   E  RL+Q E
Sbjct: 1005 RRRHEDIRLKQDE 1017


>gi|392896102|ref|NP_001254998.1| Protein B0464.2, isoform c [Caenorhabditis elegans]
 gi|224492384|emb|CAX51622.1| Protein B0464.2, isoform c [Caenorhabditis elegans]
          Length = 1201

 Score =  355 bits (911), Expect = 7e-95,   Method: Compositional matrix adjust.
 Identities = 260/935 (27%), Positives = 482/935 (51%), Gaps = 57/935 (6%)

Query: 4   VYIPVQNSEEE--VRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQ 61
           + IP+++S E+  + +   +LP D  ++L IL+AE+A L  W+ +A EY++Q +V+ F  
Sbjct: 65  IAIPLKDSHEDEVIEINCSELP-DGEEVLQILEAEEAKLSYWIEVALEYYRQDRVDLFMM 123

Query: 62  ILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKAS 121
           ILE   S    EY   V+ +++  L+ L  Y+   G  E  + +K + F  AT  +N A 
Sbjct: 124 ILESAGSRAGLEYEG-VKQDQMRALDILAAYWMTQGYREKAKDKKSDFFSKATVLFNTAD 182

Query: 122 RIDMHEPSTWVGKGQLLL-----AKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 176
           +I M+E S    +    L     +  + E A   F  V++ +  NV  L+G+A + FN+ 
Sbjct: 183 KIAMYEWSHLTVRAWFYLFERDKSTNKYELADQQFNYVVKTNPKNVLPLIGKAVIAFNKK 242

Query: 177 RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVA 236
            Y  ++ ++++A++        +R+GIG C  K+G + KA+ AF+RA++++P NV A+  
Sbjct: 243 DYKTAIYYFRKAIRQCRHTIADLRVGIGHCFAKMGMMDKAKTAFERAMEIEPYNVSAMCG 302

Query: 237 LAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALA 296
           L ++ L   +   ++  +    R++ +     +AL +LANHFFF  +      L   A  
Sbjct: 303 LGIILLNTYDHDSLKHAVSLFGRSYNLQTDHPVALIHLANHFFFKKEIERAWTLAWHAAT 362

Query: 297 VTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLG 356
             +    K+ ++Y + R  H++G ++ A  YY  + +  N  H     +YGLGQ+ +   
Sbjct: 363 YNDCDSIKAEAFYQMGRCRHAQGQFDGAYKYYYQARQANNGEH--TLAHYGLGQMYIHRN 420

Query: 357 DFRSALTNFEKVLEIYPDNCETLKALGHIY--VQLGQI-------EKAQELLRKAAKIDP 407
           +   A+  F+ V +  P+N +T+K LG +Y  VQL          +K +++L K   ++ 
Sbjct: 421 EIEEAIKCFDTVHKRLPNNTDTMKILGSLYAHVQLNDPAQTAEARQKGRDVLGKYLAVEN 480

Query: 408 RDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP-IEVLNNIGVIHFEKGEFES 466
            D +A IDL +LL ++D   +L+ ++ A  LL       P  E+LNN+G ++    ++E 
Sbjct: 481 DDYEACIDLAQLLEATDPKRSLELYENAIDLLVTNESIQPQPEMLNNVGALYMSMKQYEK 540

Query: 467 AHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVT 526
           A   FK A         L+ +  T   D  + +L+        R   + +H+      +T
Sbjct: 541 AEHHFKRA------KERLEEQLNT---DEGSLLLE-------RRSAPEKSHL------LT 578

Query: 527 VLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEAL 586
           + +NLA  LE +  TV A  +Y+ I+ +   Y+D YLRL  I + R+ +  S   + + +
Sbjct: 579 IRYNLALCLEHLCRTVEAEQMYKDIVKECPGYIDGYLRLGCITRDRHQVYESSLWLKQGV 638

Query: 587 KVNGKYPNALSMLGDLELKNDDWVKAKETFR-AASDATDGK--DSYATLSLGNWNYFAAL 643
           + +   P   +++G+L    ++W+ A++ F    S   + K  D Y+ ++LGN  +F  L
Sbjct: 639 QFDQASPIVWTLIGNLHFAKNEWMPAQKKFEFILSKIFNNKIPDPYSLVALGNV-WFEQL 697

Query: 644 RNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQE 703
            N  R  + E  ++++A ++Y + +     N+YAANG G VLA K  ++ ++D+F+QV+E
Sbjct: 698 LNPSRKKEDEKKYIDRALQMYQKALKLQPKNMYAANGIGCVLAYKRNWNDARDVFSQVRE 757

Query: 704 AASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEA 763
           + S     +  DVW+N+AHV   +  +  A++MY + ++KF    D+ +  YLA+ +Y A
Sbjct: 758 STS-----EFYDVWLNIAHVCMEREQWMAAVQMYSSAMKKFRKENDSTLQHYLAKAYYRA 812

Query: 764 EQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAV 823
               + K++L  A+     N  L+F+  + ++K +   L+  + T+++V + + +L+ A 
Sbjct: 813 NMLNEAKEALECAMLDQLDNTQLKFNYAIVLKKSAKEVLRGHKMTSEQVTAAIDDLKFAD 872

Query: 824 RVFSHLSAASNLHLHGFDEKKINT----HVEYCKHLLDAAKIHREAAEREEQQNRQRQEA 879
           ++F ++S   +        +   T      + CK LL  AK    AA+ ++++ R+  E 
Sbjct: 873 KIFQYISKNDDRQSSHTGMRISRTICAEEAKNCKDLLTQAKHKLAAAQTQDEEERRLMEK 932

Query: 880 ARQAALAEEARRKAEEQKKYLLEKRKLEDEQKRLR 914
             +  +A + +   E + K   EK+KLED  K LR
Sbjct: 933 QEKEKIALQNKMIEEARAKEEAEKQKLED-MKNLR 966


>gi|412988907|emb|CCO15498.1| SH2 domain binding protein [Bathycoccus prasinos]
          Length = 1225

 Score =  355 bits (910), Expect = 8e-95,   Method: Compositional matrix adjust.
 Identities = 294/1030 (28%), Positives = 486/1030 (47%), Gaps = 131/1030 (12%)

Query: 2    ACVYIPVQNSEEEVRVALDQLPR-DASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFR 60
            + + +P+ +S E V +    L + +  DIL +L++E APL +WL  A+ Y  +   E F 
Sbjct: 16   SLIQVPIGDSGEHVSIDPHNLSQTNVEDILGVLQSELAPLRVWLECAKAYLAEDNEEAFL 75

Query: 61   QILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIE-------------TKQREKE 107
            +I+  G SPEI++YY +  Y R  +L     +   +                 T  + ++
Sbjct: 76   EIVGSGCSPEIEQYYPNDVYGRAKLLCCSAAHQVNVAARLRLGGKGKGGQANTTNAQRRQ 135

Query: 108  EHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVL---EADRDNVPA 164
            EH   A +   +A  I   E    + +  LL  KGE   A       L   +  RDNV A
Sbjct: 136  EHLTRADKLLQRAFAIASKEQVVAITRAHLLFEKGEKPTAEKILDSALAMKDGGRDNVAA 195

Query: 165  LLGQACVEFNRGR-YSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRA 223
            +L +A   F   R YS+SL +YKRAL++HP  P  +RLG+  C + +     AR AF RA
Sbjct: 196  MLWKARRLFVEERKYSESLTWYKRALKMHPQAPAEVRLGLAACHFAMKDFASARLAFARA 255

Query: 224  LQLDPENVEALVALAVMDLQANEAAG-------IRKGMEKMQRAFEIYPYCAMALNYLAN 276
              +D E V+A V LA  DL   E  G       + + +E + +AFEI P   +    LA 
Sbjct: 256  ADMDNECVDAYVGLAKCDLAEFEEVGTKEHAEAVERSVENLYKAFEIDPTNPLVSLTLAE 315

Query: 277  HFFF------TGQHFL--VEQLTETALAVTNHGPT-KSHSYYNLARSYHSKGDYEKAGLY 327
            H+ +      T    L  +E LT+  +         ++ + +  A+++H+ G+   A  Y
Sbjct: 316  HYLYSSASAGTSSEELKNIETLTDGIIKNEKEASVFRAEALFIRAQAFHASGNLPSALTY 375

Query: 328  YMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYV 387
            Y +++ +++K   F  P++G+ Q+ LK  D   A  + E+    YP++    +A G +  
Sbjct: 376  YQSAI-DLDK--NFAAPHFGVAQIFLKQNDAFEAKKHCERAQSAYPESLFVKRAFGKLCA 432

Query: 388  QLGQIEKAQELLR-KAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEV 446
             +G  ++A E+      K D  D Q  ++LGELL  SD   AL+A++ A  + KK G+ +
Sbjct: 433  AVGDSKRAVEMYDFDPYKRDGTDFQTMLELGELLERSDATRALEAYEKAMNIAKKVGDTI 492

Query: 447  PIEVLNNIGVIHFE-----KGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQ 501
                LNN+GV+         G  +  +Q+ KD          +     T V +  AS+  
Sbjct: 493  DAVTLNNVGVLRARLVTSTTGAEKEDNQNNKD--------KNISKNDDTDVKNKEASLHS 544

Query: 502  FKD-MQLFHRF----------ENDGNHVE----LPWNKVTVLFNLARLLEQIHDTVAASV 546
             +D + +F+            + D   ++    LP     V FNLA+  E   +   +S 
Sbjct: 545  LEDALDIFYPEAAPNVASKLQKGDKKAIDLAKKLPAPARAVAFNLAKAEEIFGEEKKSSS 604

Query: 547  LYRLILFKYQDYVDAYLRLA-AIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELK 605
            L+  +     D +D  LR A  + +   + + ++  + EALK N    +A++  G + +K
Sbjct: 605  LFETLNKSNPDDIDVALRKAIELCERFGDFEGALTKITEALKRNPGNADAVATSGWVLMK 664

Query: 606  NDDWVKAKETFR-------------------------AASDATDGK----DSYATLSLGN 636
               W +A++ F                           AS   D K    D YA +S GN
Sbjct: 665  QRRWKEAEQQFEELRELPSDLAEEDKFHLRNAAGGGDEASKKDDDKTLKLDEYALVSAGN 724

Query: 637  WNYFAALR---NEKRAPKL---EATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQ 690
              Y++AL+   +++  PK+   E  H ++A+ LY + +V+  +N +AANG  ++LAE+G+
Sbjct: 725  AAYYSALKEGLHKRSDPKIRQREDDHYKRAESLYKKALVKEPTNAFAANGLAILLAERGR 784

Query: 691  FDVSKDLFTQVQEA----------ASGSVFVQM-----PDVWINLAHVYFAQGNFALAMK 735
             D +K +FT VQE+           S S   ++      DV +NL H+  A+  +A ++K
Sbjct: 785  MDDAKAVFTLVQESLEIENAGIAGTSASAATKILSELQADVLVNLGHIALAKAQYAASLK 844

Query: 736  MYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQ 795
             Y    ++FY+ T  +I+L+ AR HYE +     KK+L  A+H+AP N+ +RF+    +Q
Sbjct: 845  FYDRAQQEFYHGTSHEIMLFQARAHYENQNLLQAKKTLQEALHIAPMNHRVRFNLAYVVQ 904

Query: 796  KFSASTLQKT-RRTADEVRSTVAE--LEN---AVRVFSHLSAASNLHLHGFDEKKINTHV 849
            + +  +L  T +  + E R    E  LEN   A+ +F+ L    N    GFD K+   H 
Sbjct: 905  ELAQRSLNDTLKSVSSEGRVARVEKALENIQVALHMFTQLKELGNQPKFGFDTKRTTVHA 964

Query: 850  EYCKHLLDAAKIHREAAEREEQ---QNRQRQEAARQAALAEEARRKA-----EEQKKYLL 901
             +CK  L+ +K H E A  EE+   ++++ Q  AR+A     A+ KA     EEQKK  L
Sbjct: 965  NFCKQALEKSKPHLEKAHAEEEKLMKSKKAQMEARKALEEGRAKEKAAKALEEEQKKREL 1024

Query: 902  EKRKLEDEQK 911
            E    E E++
Sbjct: 1025 EAIAAESERR 1034


>gi|348688373|gb|EGZ28187.1| hypothetical protein PHYSODRAFT_248762 [Phytophthora sojae]
          Length = 943

 Score =  354 bits (909), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 268/934 (28%), Positives = 445/934 (47%), Gaps = 144/934 (15%)

Query: 6   IPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQILEE 65
           IPV+NSE+ V V +D+LP D +DI+DIL+AE APLD+WL  A EY+ QG V QF++IL  
Sbjct: 16  IPVKNSEQAVEVFVDELPEDVNDIIDILRAEVAPLDVWLQFAVEYYNQGHVAQFQEILAV 75

Query: 66  GSSPEIDEYYAD--VRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRI 123
            S P I+E Y D   R  RI    AL  +       E  ++++E     A  ++ +A R+
Sbjct: 76  ASEPGIEEIYKDNASRMCRIKFFIALASHAVNAMWNEEDEKKREAISQRAVGFFQRADRL 135

Query: 124 DMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLE 183
           D   P T VGK  + +AK E ++A    K VL +++ N+PA+LG+A + + + +Y D+ +
Sbjct: 136 DHQHPMTLVGKALMFMAKNEDDRADRFVKSVLISNKTNLPAILGKALLLYRKKQYKDAKK 195

Query: 184 FYKRALQVHPSCPGA--IRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMD 241
            Y  A+++HP  P A  +R+    C Y LG + KAR   +    LD  NV+A++A A+  
Sbjct: 196 LYLEAIKLHPRSPQAANMRMCFAYCCYHLGAVEKARAVMRYTASLDETNVDAVIASALWQ 255

Query: 242 L--QANE--AAGIR----KGMEKMQRAFEIYPYCAMALNYLANHFF-------------- 279
           L  Q+ E  A  IR    + M  +  A  I       LN+LANH+F              
Sbjct: 256 LASQSREERAVSIRDESSRFMMMIHHAHAIDKTNPTVLNHLANHYFSQWIPLPCTVSVVR 315

Query: 280 ---------------FTGQHFLV------------EQLTETALAVTNHGPTKSHSYYNLA 312
                            GQ   +            + ++ + L +      +S S  N+A
Sbjct: 316 GSAVVSTSKDISSEVSPGQIICIGDKYVAYISRDEDAVSSSGLKLDGPYRDESASATNIA 375

Query: 313 RSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIY 372
           R  + K        ++   + EI     ++     +G+     G ++ A + +     ++
Sbjct: 376 RKDYDKMFTLAGNAFHSTKIPEIRSESCYL-----MGRGCHAQGKYKDAYSYYFNAGRLW 430

Query: 373 PDNCETLKALGHIYVQLGQIEKAQELLRKAAK---------------------------- 404
           P        L  +Y +  +  KA   L KA K                            
Sbjct: 431 PKFVLPWFGLAQMYYERKEFTKAASYLEKANKAYPENVEILSLLGDIYGKLGKKDEAVVL 490

Query: 405 ------IDPRDAQAFIDLGELLISS----DTGAALDAFKTARTLLKKAGEEVPIEVLNNI 454
                 ++P + +A I   ELL  S    D   A+ ++  A  ++  A E VP+EV  N+
Sbjct: 491 LRRVVELEPGNVEALIGTAELLHGSPERKDQIIAISSYIAAEKVMNNASERVPMEVYVNL 550

Query: 455 GVIHFEKGEFESAHQSFKDA---LGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRF 511
           GV+    G+   A   FK A   LGD    +  D ++K+   DA A              
Sbjct: 551 GVLQQRVGKTADAINCFKKALKQLGDD---SSADEESKSEEADALA-------------- 593

Query: 512 ENDGNHVELPWN-KVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAK 570
             + N +  P    VT+L+N+ R+ E++ +   A  LY  IL  +  Y D  LRL  + +
Sbjct: 594 --EENSIPKPSEANVTILYNMGRVYEEMGNRDRAKKLYDAILEVFPRYTDCLLRLGCMLR 651

Query: 571 ARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGK-DSY 629
            R     +I++ ++ L+V+     A  + G++ LK  +WV A++ +         K D Y
Sbjct: 652 DRGQDADAIKMFDKVLEVDPTCAEACLLQGNIHLKKREWVFAQKKYEKVMGMPGLKNDPY 711

Query: 630 ATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKG 689
           A LS+GN  + + L  + R  K    ++  ++  Y + +  H  N+YAANG G+++AEKG
Sbjct: 712 AFLSMGNI-FMSNLGEKNRYTK----NMSLSEVYYKKTLAAHPHNIYAANGLGIMIAEKG 766

Query: 690 QFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTD 749
            F+++K +F+QV+EA+       MPD WINLAH++ A+  +  A+++Y  CL K Y   D
Sbjct: 767 NFELAKQIFSQVREASP-----DMPDAWINLAHIFVAEERYQEAIQLYTVCLTKCYQGQD 821

Query: 750 AQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTL-QKT--- 805
            ++LLYLA+ +YE++ +  C  +L R +H+ P++  L +++G+A + ++ +TL Q+T   
Sbjct: 822 LEVLLYLAKAYYESKDFPSCISTLSRGLHMYPNDLRLWYNSGLAQEDYAVTTLGQETVAT 881

Query: 806 ----------RRTADEVRSTVAELENAVRVFSHL 829
                     +RT  +V+  + +L+ A R+F  L
Sbjct: 882 RSGSGSAVPQQRTMADVQRAILDLKRAQRIFCFL 915


>gi|392896106|ref|NP_001255000.1| Protein B0464.2, isoform a [Caenorhabditis elegans]
 gi|6648105|sp|Q03560.3|YKD1_CAEEL RecName: Full=TPR repeat-containing protein B0464.2
 gi|3873800|emb|CAA79544.1| Protein B0464.2, isoform a [Caenorhabditis elegans]
          Length = 1150

 Score =  354 bits (909), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 260/935 (27%), Positives = 482/935 (51%), Gaps = 57/935 (6%)

Query: 4   VYIPVQNSEEE--VRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQ 61
           + IP+++S E+  + +   +LP D  ++L IL+AE+A L  W+ +A EY++Q +V+ F  
Sbjct: 14  IAIPLKDSHEDEVIEINCSELP-DGEEVLQILEAEEAKLSYWIEVALEYYRQDRVDLFMM 72

Query: 62  ILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKAS 121
           ILE   S    EY   V+ +++  L+ L  Y+   G  E  + +K + F  AT  +N A 
Sbjct: 73  ILESAGSRAGLEYEG-VKQDQMRALDILAAYWMTQGYREKAKDKKSDFFSKATVLFNTAD 131

Query: 122 RIDMHEPSTWVGKGQLLL-----AKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 176
           +I M+E S    +    L     +  + E A   F  V++ +  NV  L+G+A + FN+ 
Sbjct: 132 KIAMYEWSHLTVRAWFYLFERDKSTNKYELADQQFNYVVKTNPKNVLPLIGKAVIAFNKK 191

Query: 177 RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVA 236
            Y  ++ ++++A++        +R+GIG C  K+G + KA+ AF+RA++++P NV A+  
Sbjct: 192 DYKTAIYYFRKAIRQCRHTIADLRVGIGHCFAKMGMMDKAKTAFERAMEIEPYNVSAMCG 251

Query: 237 LAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALA 296
           L ++ L   +   ++  +    R++ +     +AL +LANHFFF  +      L   A  
Sbjct: 252 LGIILLNTYDHDSLKHAVSLFGRSYNLQTDHPVALIHLANHFFFKKEIERAWTLAWHAAT 311

Query: 297 VTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLG 356
             +    K+ ++Y + R  H++G ++ A  YY  + +  N  H     +YGLGQ+ +   
Sbjct: 312 YNDCDSIKAEAFYQMGRCRHAQGQFDGAYKYYYQARQANNGEH--TLAHYGLGQMYIHRN 369

Query: 357 DFRSALTNFEKVLEIYPDNCETLKALGHIY--VQLGQI-------EKAQELLRKAAKIDP 407
           +   A+  F+ V +  P+N +T+K LG +Y  VQL          +K +++L K   ++ 
Sbjct: 370 EIEEAIKCFDTVHKRLPNNTDTMKILGSLYAHVQLNDPAQTAEARQKGRDVLGKYLAVEN 429

Query: 408 RDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP-IEVLNNIGVIHFEKGEFES 466
            D +A IDL +LL ++D   +L+ ++ A  LL       P  E+LNN+G ++    ++E 
Sbjct: 430 DDYEACIDLAQLLEATDPKRSLELYENAIDLLVTNESIQPQPEMLNNVGALYMSMKQYEK 489

Query: 467 AHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVT 526
           A   FK A         L+ +  T   D  + +L+        R   + +H+      +T
Sbjct: 490 AEHHFKRA------KERLEEQLNT---DEGSLLLE-------RRSAPEKSHL------LT 527

Query: 527 VLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEAL 586
           + +NLA  LE +  TV A  +Y+ I+ +   Y+D YLRL  I + R+ +  S   + + +
Sbjct: 528 IRYNLALCLEHLCRTVEAEQMYKDIVKECPGYIDGYLRLGCITRDRHQVYESSLWLKQGV 587

Query: 587 KVNGKYPNALSMLGDLELKNDDWVKAKETFR-AASDATDGK--DSYATLSLGNWNYFAAL 643
           + +   P   +++G+L    ++W+ A++ F    S   + K  D Y+ ++LGN  +F  L
Sbjct: 588 QFDQASPIVWTLIGNLHFAKNEWMPAQKKFEFILSKIFNNKIPDPYSLVALGNV-WFEQL 646

Query: 644 RNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQE 703
            N  R  + E  ++++A ++Y + +     N+YAANG G VLA K  ++ ++D+F+QV+E
Sbjct: 647 LNPSRKKEDEKKYIDRALQMYQKALKLQPKNMYAANGIGCVLAYKRNWNDARDVFSQVRE 706

Query: 704 AASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEA 763
           + S     +  DVW+N+AHV   +  +  A++MY + ++KF    D+ +  YLA+ +Y A
Sbjct: 707 STS-----EFYDVWLNIAHVCMEREQWMAAVQMYSSAMKKFRKENDSTLQHYLAKAYYRA 761

Query: 764 EQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAV 823
               + K++L  A+     N  L+F+  + ++K +   L+  + T+++V + + +L+ A 
Sbjct: 762 NMLNEAKEALECAMLDQLDNTQLKFNYAIVLKKSAKEVLRGHKMTSEQVTAAIDDLKFAD 821

Query: 824 RVFSHLSAASNLHLHGFDEKKINT----HVEYCKHLLDAAKIHREAAEREEQQNRQRQEA 879
           ++F ++S   +        +   T      + CK LL  AK    AA+ ++++ R+  E 
Sbjct: 822 KIFQYISKNDDRQSSHTGMRISRTICAEEAKNCKDLLTQAKHKLAAAQTQDEEERRLMEK 881

Query: 880 ARQAALAEEARRKAEEQKKYLLEKRKLEDEQKRLR 914
             +  +A + +   E + K   EK+KLED  K LR
Sbjct: 882 QEKEKIALQNKMIEEARAKEEAEKQKLED-MKNLR 915


>gi|308501437|ref|XP_003112903.1| hypothetical protein CRE_25581 [Caenorhabditis remanei]
 gi|308265204|gb|EFP09157.1| hypothetical protein CRE_25581 [Caenorhabditis remanei]
          Length = 1331

 Score =  350 bits (899), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 238/838 (28%), Positives = 434/838 (51%), Gaps = 50/838 (5%)

Query: 11   SEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQILEEGSSPE 70
            +EE + +   +LP D +++L IL+AE+A L  W+ +A EYF+Q  V+ F  ILE   +  
Sbjct: 204  AEEVIEINCSELP-DGAEVLSILEAEEAKLSYWIEVALEYFRQNLVQPFMDILEAAGTRA 262

Query: 71   IDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPST 130
              EY   V+ +++  L+ L  Y+   G  E  + +K++ F  AT  +N A +I M+E S 
Sbjct: 263  GLEYQG-VKQDQMRALDILAAYWMTEGYKEKAKDKKQDLFSKATVLFNTADKIAMYEWSH 321

Query: 131  WVGKGQLLL-----AKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFY 185
               +    L     +  + E A   F  V++    NV  L+G+A + FN+  Y  ++ ++
Sbjct: 322  LTVRAWFYLFERDKSTNKYELADQQFNYVVKTYPQNVLPLIGKAVISFNKKDYKTAVYYF 381

Query: 186  KRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQAN 245
            ++A++        +R+GIG C  K+G + KAR AF+RAL ++  NV A+  L ++ L   
Sbjct: 382  RKAIRQRHHSIADLRVGIGYCYAKMGLMDKARVAFERALDIEENNVSAMCGLGIILLNTA 441

Query: 246  EAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKS 305
            ++  + K ++   +++ +     +AL +LANHFFF GQ      L   A         ++
Sbjct: 442  DSDDLVKAVKLFGKSYNLQADHPVALVHLANHFFFKGQIDRAFHLASHAAQHNECDSIRA 501

Query: 306  HSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNF 365
             +Y+   R  H++G+Y+ A  +Y  + +  N  H     +YGLGQ+ +   +   A+  F
Sbjct: 502  EAYFQAGRCRHAQGNYDGAYKFYYQARQANNGEH--TLAHYGLGQMFIHRNEIEDAIKCF 559

Query: 366  EKVLEIYPDNCETLKALGHIY--VQLGQI-------EKAQELLRKAAKIDPRDAQAFIDL 416
            E V +  P N ET+K LG +Y  VQL          +K +++L K   I+  D +  IDL
Sbjct: 560  ETVHQRLPQNMETMKILGSLYAHVQLNDPVKTNQARQKGRDVLTKYLSIESNDYEVCIDL 619

Query: 417  GELLISSDTGAALDAFKTARTLLKK-AGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
             +LL S+D   +L+ ++ +  LL++  G +   E+LNN+G ++    ++E A   FK A 
Sbjct: 620  AQLLESTDPKKSLELYEKSIQLLEEFEGIQPQPEMLNNVGALYMSMKQYEKAEHHFKRA- 678

Query: 476  GDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLL 535
                     D   +    +  A +L         R   + +H+      +T+ +NLAR L
Sbjct: 679  --------RDRLEEQLTSEEGAQLLT-------RRSAPEKSHL------LTIRYNLARCL 717

Query: 536  EQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNA 595
            E +  T  A  +Y+ I+ +   Y+D YLRL  I + R+ +  S   + + ++ +   P  
Sbjct: 718  EHLCRTAEAEQMYKDIVHECPGYIDGYLRLGCITRDRHQVYESSLWMKQGVQFDQSSPIV 777

Query: 596  LSMLGDLELKNDDWVKAKETFR-AASDATDGK--DSYATLSLGNWNYFAALRNEKRAPKL 652
             +++G+L    ++W+ +++ F    S   + K  D Y+ ++LGN  +F  L N  R  + 
Sbjct: 778  WTLIGNLHFAKNEWMPSQKKFEFILSKIFNNKTPDPYSLVALGNV-WFEQLLNPSRKKED 836

Query: 653  EATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQ 712
            E  ++++A ++Y + +     N++AANG G VLA K  ++ ++D+F+QV+E+ S     +
Sbjct: 837  EKKYIDRALQMYQKALKLEPKNMHAANGIGCVLAYKKNWNDARDVFSQVRESTS-----E 891

Query: 713  MPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKS 772
              DVW+N+AHV   +  +  A++MY + ++KF    D  +L YLA+ +Y A    + K++
Sbjct: 892  FYDVWLNIAHVCMEREQWMTAVQMYSSAMKKFRKENDPVLLHYLAKAYYRANMLVEAKEA 951

Query: 773  LLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLS 830
            L +A+     N  L+F+  + ++K +   L+  + T+ +V S +  L  A ++F ++S
Sbjct: 952  LEKAMFDQLDNTQLKFNYAIVLKKTAKDILRGHKITSAQVESAIYNLTFAEKIFQYIS 1009


>gi|328701581|ref|XP_003241648.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog isoform 2
           [Acyrthosiphon pisum]
          Length = 975

 Score =  347 bits (889), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 222/714 (31%), Positives = 377/714 (52%), Gaps = 55/714 (7%)

Query: 206 CRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYP 265
           C  KLG   KAR AF+RA+QLD + V ALV LA++ L       I+ G+  + +A+ I  
Sbjct: 4   CFLKLGNAEKARLAFERAIQLDSKCVGALVGLAILKLNGENPGDIKLGVNMLSKAYTIDT 63

Query: 266 YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAG 325
              M LN+L+NHFFF   +   E L   AL  T +   ++ S Y +AR++H + +Y++A 
Sbjct: 64  TNPMVLNHLSNHFFFKKDYTKYELLARHALQNTENEAMRAESCYQMARAFHVQNNYDQAF 123

Query: 326 LYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 385
            YY  + +    P  F+ P+YGLGQ+ +  GD  +A   FEKVL+ +P N E +K LG +
Sbjct: 124 QYYYQATQFA--PVTFVLPHYGLGQMYIYGGDMENAAQCFEKVLKAHPGNYEAMKILGSL 181

Query: 386 YVQLGQIEK---AQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLK-K 441
           Y      +K   A+  L+K  +  P D +A+I+L ++L  SD   +L A+     L++ +
Sbjct: 182 YANSKNQQKRDIAKSHLKKVTEHFPDDVEAWIELAQILEQSDLQGSLSAYGKVIVLMRNQ 241

Query: 442 AGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQ 501
               +P E+LNN+  ++F     + A    +++L                    S  M++
Sbjct: 242 VNNYIPPEILNNVAALNFRLQNMDEARSKLEESLS------------------LSKKMVE 283

Query: 502 FKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDA 561
             D Q ++               VT  FNLAR+ E       A   Y+ IL ++ +Y+D 
Sbjct: 284 -ADPQYYNSIA------------VTTTFNLARIFEAQCQFQKAETFYKDILKEHPNYIDC 330

Query: 562 YLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAAS 620
           YLRL  +A+ RN +  + +   EAL+++ ++P+A S+LG+L L   +W   ++ F R   
Sbjct: 331 YLRLGCMARDRNQIYEASDWFKEALRIDNEHPDAWSLLGNLHLAKMEWGPGQKKFERVLK 390

Query: 621 DATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANG 680
           + +   DSY+ ++LGN  +   L    R  + E  H + A + +T+V+     N++AANG
Sbjct: 391 NPSTLNDSYSLIALGNV-WLQTLHQPTRNKEQEKRHQDLALQFFTKVLKNDPKNIWAANG 449

Query: 681 AGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNC 740
            G V+A K   + ++D+F QV+EA +        DVW+N+AH+Y  Q  +  A++MY+NC
Sbjct: 450 IGCVMAHKQYINEARDIFAQVREATA-----DFCDVWLNIAHIYIEQKQYISAIQMYENC 504

Query: 741 LRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSAS 800
           ++KF+ + + +IL YL R +++A + ++ KK  L+A  +AP +  + ++    +QK SA 
Sbjct: 505 IKKFFKHDNVEILQYLGRAYFKAGKLKEAKKVFLKARRVAPQDLVIIYNIAFVLQKLSAQ 564

Query: 801 TLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAK 860
           TL+  +    +V   V EL  + + F +L  A N     +D    +   + C+ LL  A+
Sbjct: 565 TLKDGKSNLKDVLKAVHELGLSHKYFQYL--AVNGDRMRYDVNLADFEAKQCQDLLSQAQ 622

Query: 861 IHREAAER---EEQQNRQRQEAARQAALAEE------ARRKAEEQKKYLLEKRK 905
            H   A +   +E++ R++QE  R++   ++      A +K EEQ+K +L KR+
Sbjct: 623 YHVARARKMDHDEREMRRKQEEERESLRVKQIEEQTKALQKQEEQRKEMLLKRQ 676



 Score = 45.8 bits (107), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 70/338 (20%), Positives = 143/338 (42%), Gaps = 53/338 (15%)

Query: 85  ILNALGVYYTYLGKIETKQREKEEHFILA-------TQYYNKASRIDMHEPSTWVGKGQL 137
           ILN +      L  ++  + + EE   L+        QYYN  +       +T     ++
Sbjct: 250 ILNNVAALNFRLQNMDEARSKLEESLSLSKKMVEADPQYYNSIA------VTTTFNLARI 303

Query: 138 LLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPG 197
             A+ + ++A + +K +L+   + +   L   C+  +R +  ++ +++K AL++    P 
Sbjct: 304 FEAQCQFQKAETFYKDILKEHPNYIDCYLRLGCMARDRNQIYEASDWFKEALRIDNEHPD 363

Query: 198 AIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE---ALVALAVMDLQANEAAGIRKGM 254
           A  L   L   K+ + G  ++ F+R L+ +P  +    +L+AL  + LQ        K  
Sbjct: 364 AWSLLGNLHLAKM-EWGPGQKKFERVLK-NPSTLNDSYSLIALGNVWLQTLHQPTRNKEQ 421

Query: 255 EKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHS-YYNLAR 313
           EK  +   +               FFT    +++   +   A    G   +H  Y N AR
Sbjct: 422 EKRHQDLALQ--------------FFTK---VLKNDPKNIWAANGIGCVMAHKQYINEAR 464

Query: 314 SYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIY- 372
                           A V+E     +F   +  +  + ++   + SA+  +E  ++ + 
Sbjct: 465 DI-------------FAQVREATA--DFCDVWLNIAHIYIEQKQYISAIQMYENCIKKFF 509

Query: 373 -PDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRD 409
             DN E L+ LG  Y + G++++A+++  KA ++ P+D
Sbjct: 510 KHDNVEILQYLGRAYFKAGKLKEAKKVFLKARRVAPQD 547


>gi|344280887|ref|XP_003412213.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog
           [Loxodonta africana]
          Length = 1079

 Score =  346 bits (888), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 215/597 (36%), Positives = 332/597 (55%), Gaps = 48/597 (8%)

Query: 2   ACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQ 61
             + IP+++++E + +  DQLP +  +++ ILK E   L +W+ +A EY+KQGK E+F +
Sbjct: 4   GSIEIPLRDTDEVIELDFDQLP-EGDEVISILKQEHTQLHIWIALALEYYKQGKTEEFVK 62

Query: 62  ILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNK 119
           +LE   +  ID    Y D   +++  L+ L  YY    + E  +  K++    AT  Y  
Sbjct: 63  LLE---AARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNKKDLITQATLLYTM 119

Query: 120 ASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRY 178
           A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+PALLG+AC+ FN+  Y
Sbjct: 120 ADKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPALLGKACISFNKKDY 179

Query: 179 SDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA 238
             +L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF RAL+L+ + V ALV LA
Sbjct: 180 RGALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALELNSKCVGALVGLA 239

Query: 239 VMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVT 298
           V++L   EA  I+ G++ + RA+ I P   M LN+LANHFFF   +  V+ L   A   T
Sbjct: 240 VLELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNT 299

Query: 299 NHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDF 358
                ++ S Y LARS+H + DY++A  YY  + +  +    F+ P++GLGQ+ +  GD 
Sbjct: 300 EVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASSS--FVLPFFGLGQMYIYRGDK 357

Query: 359 RSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKIDPRDAQAFID 415
            +A   FEKVL+ YP+N ET+K LG +Y      EK   A+  L+K  +  P D +A+I+
Sbjct: 358 ENASQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKVTEQYPDDVEAWIE 417

Query: 416 LGELLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDA 474
           L ++L  +D   AL A+ TA R L +K   +VP E+LNN+G +HF  G    A + F   
Sbjct: 418 LAQILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYF--- 474

Query: 475 LGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWN--KVTVLFNLA 532
                 L  LD                        R + +  H E  +N   VT  +NLA
Sbjct: 475 ------LASLD------------------------RAKAEAEHDEHYYNAISVTTSYNLA 504

Query: 533 RLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVN 589
           RL E + +   A  LY+ IL ++ +YVD YLRL A+A+ + N   + +   EAL++N
Sbjct: 505 RLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEASDWFKEALQIN 561



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 85/229 (37%), Positives = 134/229 (58%), Gaps = 16/229 (6%)

Query: 685 LAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKF 744
           LA KG F  ++D+F QV+EA +      + DVW+NLAH+Y  Q  +  A++MY+NCLRKF
Sbjct: 563 LAHKGYFREARDVFAQVREATA-----DISDVWLNLAHIYVEQKQYISAVQMYENCLRKF 617

Query: 745 YYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQK 804
           Y + + +++LYLAR  ++  + Q+CK++LL+A H+APS+  L F+  + +Q+ + S L+ 
Sbjct: 618 YKHQNTEVVLYLARALFKCGKLQECKQTLLKARHVAPSDTVLMFNVALVLQRLATSVLKD 677

Query: 805 TRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHRE 864
            +    EV + V ELE A R FS+LS   +     FD     T    C  LL  A+ H  
Sbjct: 678 EKSNLKEVLNAVKELELAHRYFSYLSKVGDKMR--FDLALAATEARQCSDLLSQAQYHVA 735

Query: 865 AAEREEQQNR-------QRQEAARQAALAEE--ARRKAEEQKKYLLEKR 904
            A +++++ R       Q +E  RQ  L E+   R + +E++K LLE+R
Sbjct: 736 RARKQDEEERELRAKQEQEKELLRQKLLKEQEEKRLREKEEQKKLLEQR 784


>gi|290994703|ref|XP_002679971.1| predicted protein [Naegleria gruberi]
 gi|284093590|gb|EFC47227.1| predicted protein [Naegleria gruberi]
          Length = 1064

 Score =  345 bits (885), Expect = 7e-92,   Method: Compositional matrix adjust.
 Identities = 263/968 (27%), Positives = 474/968 (48%), Gaps = 92/968 (9%)

Query: 2   ACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQ 61
           A + IP  +  +   VA+D +  +  DI ++L  E+ PL+ +L  A  Y    K + F +
Sbjct: 8   AVIDIPTADGYD---VAVDLMNDEYDDIKNLLVDEKVPLEYYLKTAILYHNIDKTDHFNK 64

Query: 62  ILE---EGSSPEIDEYYAD-------VRYERIAILNALGVYYTYLGKIETKQ-------- 103
           +L    E S  E D+YY D        R + + IL  +G       K+   Q        
Sbjct: 65  LLNLVIEDSEVE-DKYYQDNPKPLLDARTDALNIL--VGHLIEQYNKVRIHQFDNERQAM 121

Query: 104 -----REKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEAD 158
                 ++EE      +   KA + +  + S +  +G L L  G +++A S+F  ++  D
Sbjct: 122 EDICDNKREELLNDINKLLGKAEQFNPSKLSNFYSRGVLHLNLGALDKAESSFDYIITVD 181

Query: 159 RDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQ 218
           +DN+ + LG AC+++++ +Y ++L  +++ L ++P  P  IRLG+GLC Y+L    +A+Q
Sbjct: 182 KDNILSKLGMACIKYHKKQYKEALSEFEQCLLMNPQGPADIRLGMGLCHYQLDNFERAKQ 241

Query: 219 AFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEK-MQRAFEIYPYCAMALNYLANH 277
            F+R LQLDP NV AL+ LA++DL + +   ++  ++  ++RA+ + P  +  LN L NH
Sbjct: 242 CFERVLQLDPNNVSALIYLAIIDLNSRDEELLQNAVKNYLKRAYSLDPGNSQVLNLLGNH 301

Query: 278 FFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINK 337
           FFF  +    E+L   A   T     K+ S YN+AR+YH K DY+ A  YY   V  +  
Sbjct: 302 FFFRREVDKTEELVFAAFHNTKSPKIKAESCYNMARAYHHKKDYDSAFKYYYRIVSRL-- 359

Query: 338 PHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQE 397
             E+    YGLGQ+ ++  +   A+  FE++L++ P+N ET  ALG++Y +    +K+  
Sbjct: 360 WPEYTLARYGLGQLYIQRNEIDKAVEEFEQILKVDPENLETNLALGNLYARKRDSKKSLA 419

Query: 398 LLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPI--EVLNNIG 455
            L+K  K DP +  A + +GE         ALD+ K A T++++   E+ +  E+ NNI 
Sbjct: 420 YLKKVLKKDPENINALLRIGEHE-RHQIQLALDSLKEALTIIEEGETELVVTHELYNNIA 478

Query: 456 VIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDG 515
           V +++ G+   + + FK AL          S  +  V+D                   D 
Sbjct: 479 VHYYKLGKNTESEEYFKKAL----------SLAECNVMDNL-----------------DD 511

Query: 516 NHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNL 575
            H  +    +++++N AR  E       A  LY  I+ ++  Y++AYLRL  I +   N 
Sbjct: 512 LHQAIEVKHLSLVYNFARFKEVSKSLDDAQKLYLKIVAQHPSYINAYLRLGKIQQKNGNH 571

Query: 576 QLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLG 635
           + +I     A  +        + LG   L+ +++ +A++ F   +   D  D YA L +G
Sbjct: 572 EKAIHFCKLATSLEPNNAATWAFLGQTYLEQNNYTEAQKAFEYITQNIDKNDIYALLGMG 631

Query: 636 NWNYFAALRNEKRAP------KLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKG 689
           N  YF +LR  K  P      ++E  HL+ A   + + +    SN+YAA  +G VL E G
Sbjct: 632 NV-YFKSLRTAKPNPDEKEQERIEK-HLDYALLFFEKTLKLDNSNMYAALNSGCVLCENG 689

Query: 690 QFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTD 749
             +  K L ++V+E   G      P+ +INL H+   Q  F+ A K+Y  C ++F+ + +
Sbjct: 690 YTEEGKALISRVREICVGDDMKDTPETYINLGHLAMIQKQFSQAEKLYSTCSKRFFNDEN 749

Query: 750 AQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTA 809
             +L YLA++ ++  + ++    L +      +N T++++  +A  +   +TL  + +  
Sbjct: 750 PMVLAYLAKSLFDNNKHEESLNILKKIQEQDATNLTIKYNIALAFYEKLVATLNDSNKDL 809

Query: 810 DEVRSTVAELENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAE-- 867
            +V+    + +  + +FS ++  +N         K N+    C+  LD   +  +A +  
Sbjct: 810 TKVQILEDQNQTIINLFSEIAENTN--------SKKNS----CEFSLDEKIVVHKAKDFI 857

Query: 868 ------REEQQNRQRQEAARQAALAEEARRKAEEQKKYLLE--KRKLEDEQKRLRQQEEH 919
                  +E+  + R++A ++     E ++K E+  K + E  K++LED+++  R +EE 
Sbjct: 858 TVLETKIKEKIEKYREKAEKEELARHELKKKQEDAFKIIEEQTKKQLEDQEELRRVKEEK 917

Query: 920 FQRVKARI 927
            +    R+
Sbjct: 918 LRETFGRL 925


>gi|428166303|gb|EKX35281.1| hypothetical protein GUITHDRAFT_79976, partial [Guillardia theta
           CCMP2712]
          Length = 750

 Score =  342 bits (877), Expect = 6e-91,   Method: Compositional matrix adjust.
 Identities = 233/773 (30%), Positives = 400/773 (51%), Gaps = 71/773 (9%)

Query: 6   IPVQNSEEEV-RVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQILE 64
           +P+  +E+E+  +   +LP D ++I+ IL +E APL LWL +A  Y++Q +V QF  ++E
Sbjct: 7   VPIHETEDEILELPKSELPDDPNEIMQILASELAPLKLWLELALAYYQQNRVPQFLMVME 66

Query: 65  EGSS---PEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKAS 121
             +    P   +YY D ++ RIA+LN L  Y+  +      ++ KE+HF  AT+ + +A 
Sbjct: 67  TSTGDEGPFYQDYYKDDKHGRIALLNCLAAYHVQMASRTKSRQTKEQHFQKATELFQQAD 126

Query: 122 RIDMHEPSTWVGKGQLLLAKGEVE-------------QASSAFKIVLEADRDNVPALLGQ 168
           RID     T+VGKG + +AK  +              QA   F   +E DR  +PA LG+
Sbjct: 127 RIDRGVALTFVGKGLIHIAKMSLPTRKGSDSSGDHLMQAGVMFDNAIECDRTCIPAWLGK 186

Query: 169 ACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDP 228
           A V+FN+ +Y ++L+ YK+ L+++P+CP  +RLG+  C   L     A +AF+R ++L P
Sbjct: 187 ASVQFNKRQYGEALKSYKQVLRLNPACPPEVRLGLAHCYAALKLDDYALKAFERVVELSP 246

Query: 229 ENVEALVALAVMDLQANEAAG-------------IRKGMEKMQRAFEIY-PYCAMALNYL 274
            NVE LV LA++++  +  A              + K ++ ++RA++      A+ LN+L
Sbjct: 247 NNVEGLVGLAIIEMNRDPPANLTEEQEGTFVRRQVAKSLKYLKRAYQNNGDQNAVVLNHL 306

Query: 275 ANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKE 334
           ANH+    +      L   A   T+    K+ S Y++AR YH + D+++A  YY  +V  
Sbjct: 307 ANHYIIGEELEKAHSLATIAYNTTDVKKIKAESCYHIARVYHLRKDFDQAHKYYNHAVSF 366

Query: 335 INKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK 394
                +F+ P +GLGQ       F  A+   +KVL+  P+N E  K +G +  +LG  EK
Sbjct: 367 WP---DFLLPQFGLGQTFTHYNKFSEAIPCLDKVLQTQPNNYEARKLMGFLCSKLGDTEK 423

Query: 395 AQELLRKAAKIDPR---DAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVL 451
           A   LRK  + +     D + +++L +LL   +   +L  +  AR +LK+    V   +L
Sbjct: 424 AIMHLRKITEFEIENKIDEEVWMELAQLLEKQNPARSLQLYHKAREVLKRKKLPVNTSIL 483

Query: 452 NNIGVIHFEKGEFESAHQSFKDAL-GDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHR 510
           NNI  ++ ++G+   A + ++ AL   GI            V   S ++   + + L   
Sbjct: 484 NNIASLYQKQGDHAKAMKFYEKALFSCGIQ-----------VEPGSGTVKVVESIDLNDA 532

Query: 511 FENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAK 570
            +  G         VT+L+N ARL EQ      A  +Y+ I+ +  +Y+DAYLR+A+I +
Sbjct: 533 MKGQG---------VTILYNYARLQEQKQQHNIAYNIYQTIIKERPNYMDAYLRIASICE 583

Query: 571 ARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYA 630
            R N + +   +  AL+VN  +   L  L  L +K  ++ +A++       + +   + A
Sbjct: 584 TRGNNRDASTWLLLALQVNPNHEETLIHLAKLAMKILNFSRAQKYLEKIL-SRNSNHALA 642

Query: 631 TLSLGNWNYFAALRNEKRAPKLEAT------HLEKAKELYTRVI-VQHTSNLYAANGAGV 683
            + LGN  +F++ +++  +   + +      +L +A   Y+RVI  +  +NL AANGA  
Sbjct: 643 NVLLGNI-FFSSAKHDGDSQDTDKSRSKYVQYLSRALSFYSRVIESEGGTNLLAANGAAT 701

Query: 684 VLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKM 736
           V+ + G+   +K +F  ++E A      Q+PD WINL H++F Q  F  A+K+
Sbjct: 702 VIGQSGRLSEAKSIFAHLRETAPH----QLPDAWINLGHIHFLQDEFTQAIKI 750


>gi|339244101|ref|XP_003377976.1| RNA polymerase-associated protein CTR9-like protein [Trichinella
           spiralis]
 gi|316973156|gb|EFV56779.1| RNA polymerase-associated protein CTR9-like protein [Trichinella
           spiralis]
          Length = 1189

 Score =  340 bits (871), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 262/904 (28%), Positives = 438/904 (48%), Gaps = 89/904 (9%)

Query: 6   IPVQNSEEEV-RVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQILE 64
           IP+ N++ EV  +  D    DA +I+DIL  E+APL LW+ +A EY+K+G+   F  +LE
Sbjct: 10  IPLYNNKNEVIEIDFDSHIPDAKEIMDILVQERAPLYLWIKLALEYYKRGRDSDFATLLE 69

Query: 65  EGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASR 122
              +   D Y  Y D   +++  L+ L  Y+   G  E  + E+ E    +T  Y  + +
Sbjct: 70  MSGT---DAYVNYPDYARDQMRALDLLAAYFVQKGTKERSKDERAEILAKSTVLYTTSDK 126

Query: 123 IDMHEPST----------WVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQACV 171
           ++M++              +G+  L     E ++QA + F  VL    ++  ALLG+A +
Sbjct: 127 VNMYDKVLEYLITEYKYHLLGRAYLCSQDWEKIDQADAQFNFVLNQTPNSTAALLGKAAI 186

Query: 172 EFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENV 231
            F +  Y ++L +YK+ L+ +P+CP  +RL +G C  KLG L KAR AFQRAL+L+P  V
Sbjct: 187 AFKKKDYKNALLYYKKTLKTNPNCPAEVRLAMGNCFVKLGHLAKARLAFQRALELNPNCV 246

Query: 232 EALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLV---- 287
            AL  LA+++++   A  I+  + ++ RA+ I       LN LANHFFF     LV    
Sbjct: 247 GALSGLAILEMKDGTAESIKSAVHRLTRAYSIDKEDPTVLNQLANHFFFKRVLLLVVVQC 306

Query: 288 ----------EQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINK 337
                      QL   A   T +   ++ S + L R     G+YE+A  YY  +  +   
Sbjct: 307 RIGVFDRQYSHQLALYAFHKTENEALRAESCFQLGR-----GEYEQAFQYYYQA-NQFQS 360

Query: 338 PHEFIFPYYGLGQ--VQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIE-- 393
           P   + P YGLGQ  +Q    D  +A+  FE V   +P++ ET + L  +Y     +E  
Sbjct: 361 PASHL-PLYGLGQMYIQRSDNDKENAIQCFETVYARHPESQETCRILASLYASSNNMERK 419

Query: 394 -KAQELLRKAAKIDPRDAQAFIDLGELLISSDTG---AALDAFKTARTL-LKKAGEEVPI 448
            KA+ +  K  + +  D   +++   ++++   G    AL AF  A  L L+K   E+P 
Sbjct: 420 AKARTMFAKLIEHNDDDVDTWVEYA-MILADCRGYEIQALKAFDKAMKLYLEKPDIEIPA 478

Query: 449 EVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLF 508
           E  NN+G +HF   ++  A   F+ AL             K   I          D  L+
Sbjct: 479 EFYNNVGAMHFRAAKYTEAASYFEKAL------------QKVSSIPT--------DHPLY 518

Query: 509 HRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAI 568
           +            W  VT  +NLAR+ E +++   A  +Y+ IL ++  YV  YLRL  +
Sbjct: 519 NSL----------W--VTCSYNLARVKELLYELEEAEKMYKDILRRHPAYVHCYLRLGCM 566

Query: 569 AKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAASDATDGKD 627
           ++ R  +  +     EAL+ N   P+A +++G+L L   +W  A++ F R     +   D
Sbjct: 567 SRDRGQIYDASVWFKEALQFNPDDPDAWTLIGNLHLGKQEWGPAQKKFERILKQPSTAHD 626

Query: 628 SYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAE 687
            Y+ ++LGN  +F +L++     + +  + ++A  LY + +  H  N+ AANG G VLA 
Sbjct: 627 PYSLVALGNV-WFLSLQSYNHEKEKQRKYEDRALSLYKQALRVHPENILAANGVGCVLAH 685

Query: 688 KGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYN 747
           +G F  +K++F++V EA    V     D  +N+AH+Y    N+  A++ Y+ CL+KF  +
Sbjct: 686 RGYFQEAKEVFSRVCEATGDFV-----DALLNIAHIYVELRNYVAAIQTYECCLKKFAIH 740

Query: 748 TDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRR 807
               I   LA  +Y A +    K+ LL A   AP +    +     +++ +   ++  + 
Sbjct: 741 GRLDIWQCLAVAYYRANRLPQSKRILLSARIFAPYDAMTLYSLSFVLKRHAVHVMKDLKS 800

Query: 808 TADEVRSTVAELENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAE 867
              +V   V +LE A R F  L+  ++  +     +      + C  +L  A+ H E A+
Sbjct: 801 GLKQVLDAVKDLEVAERQFLFLAKFTD--VSSSVRRGAAIEGQKCTDILSQAQHHVERAQ 858

Query: 868 REEQ 871
           R+E+
Sbjct: 859 RKEE 862


>gi|326431022|gb|EGD76592.1| hypothetical protein PTSG_07709 [Salpingoeca sp. ATCC 50818]
          Length = 1102

 Score =  325 bits (832), Expect = 9e-86,   Method: Compositional matrix adjust.
 Identities = 259/898 (28%), Positives = 422/898 (46%), Gaps = 71/898 (7%)

Query: 4   VYIPVQNSEEEVRVALDQLPRDASD---ILDILKAEQAPLDLWLIIAREYFKQGKVEQFR 60
           V IPV   +     A+   P D  +   ++DI+  E   L  W  IA  Y +  K ++  
Sbjct: 46  VEIPVLQKQHHEEDAIQLGPSDLENLDTVIDIITFENVHLKYWAQIADYYRRNAKWDELY 105

Query: 61  QILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKA 120
            +L+     +     A+   ++I ++  L        K    + E ++    ATQ  N+ 
Sbjct: 106 TLLDRARQQKAPPNDAEHMPQKIRLMVMLANLLLERAKGARTKAEADQLIDQATQLTNEV 165

Query: 121 SRIDMHEPSTWVGKGQLLLAKGEVE---QASSAFKIVLEA-DRDNVPALLGQACVEFNRG 176
              D +    WV KG + L  G  E   +A + F +VL +  + ++PALLG+A ++F++ 
Sbjct: 166 DIYDQNNEGNWVCKGYISLFVGTSEHLDRARTLFDLVLTSKSQTSIPALLGRAAIDFHKD 225

Query: 177 RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVA 236
            Y+D+L  Y+  L++ PSCP +IR+ +G+C  +L +  KAR AF+RAL LD  NV ALV 
Sbjct: 226 LYADALRRYRTVLRISPSCPASIRVAMGMCFARLERFDKARAAFERALALDENNVPALVG 285

Query: 237 LAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF----LVEQLTE 292
            A++ +   E   +R+ +E++ +A+++     M LN L NHFF   ++     LV  +  
Sbjct: 286 TAILLINQKERGAMREAVERLTKAYKLDRTNPMTLNLLGNHFFHRKEYSKALGLVTHVAG 345

Query: 293 TALAVTNHGPTKSHSYYNLARSYHSKGDYEKA-GLYYMASVKEINKPHEFIFPYYGLGQV 351
           TAL        K+ +++++AR +H +G+ + A   YY A+    +     +  +YGLGQ+
Sbjct: 346 TAL----DRDIKAEAFHHMARIHHQQGNLDTALSHYYQAT----SLSPSLLPAHYGLGQM 397

Query: 352 QLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQ-------IEKAQELLRKAAK 404
            +     R A   FE V +  P N    K L  +YVQ  +       +EKA  L  K  K
Sbjct: 398 YIHKKQLRRARDCFEIVYKHMPTNMAAAKILACMYVQEAETSRSATALEKATALFDKVLK 457

Query: 405 IDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEF 464
             P D +A+++LG LLI S+   AL  F  A+T L+  G  +P E++NN+  +H      
Sbjct: 458 QRPEDIEAWVELGMLLIRSNPKRALGVFGEAKTRLEALGSALPPELVNNMACLHLLNTNH 517

Query: 465 ESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNK 524
             A   F++AL  G+ L            D  A M +  D++ F               K
Sbjct: 518 RHAKAMFEEALS-GLDLD----------PDEQADM-EEADIEFFK------------GAK 553

Query: 525 VTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNE 584
           VTV +N ARLLE  ++  AA   Y  IL  + DY DA  RL  +A+ R  +  +     +
Sbjct: 554 VTVRYNRARLLETTYELDAAEEEYHAILQSHPDYADARFRLGVMAQRRGAINEATIFFKD 613

Query: 585 ALKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYFAAL 643
            L++N     AL++LG+L ++      A+  F +         D Y+ +SLGN  +    
Sbjct: 614 CLRLNE--VTALTLLGNLCIQKRQLQHAQRYFDKIIKLRKKEGDLYSLVSLGNIFF---- 667

Query: 644 RNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQE 703
                    +     +A++ +T+ +     N++A NG G V A +G    +KDLF Q++E
Sbjct: 668 ---------QRVDFVRAQKYFTKALEASVENVFAVNGLGCVFAAQGNTAQAKDLFQQIRE 718

Query: 704 AASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEA 763
           A +      M  + +NLAH Y   G+ +  + +Y+ C RK    TDA I   LAR HY+ 
Sbjct: 719 ATTD--VEGMDQILLNLAHAYVDLGSLSEGIALYEYCQRKMGRRTDASIHAALARAHYKN 776

Query: 764 EQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAV 823
             ++  +K  ++A HL P +    F+  +  Q+ + S L   R   D++      L  A 
Sbjct: 777 RDYKLARKHFVKAKHLDPLDSRHDFNIALTQQQEARSILDSRRPLPDQLLEAETLLGLAR 836

Query: 824 RVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEAAR 881
           + F  L      H   +D K+       C  L   +K    AAE E  + +++ E AR
Sbjct: 837 QCFRQLKRPR--HQVKYDFKRAEKEERLCVDLRHQSKQRSTAAESEASKLKKQAEVAR 892


>gi|384253071|gb|EIE26546.1| TPR-like protein [Coccomyxa subellipsoidea C-169]
          Length = 751

 Score =  324 bits (831), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 240/815 (29%), Positives = 397/815 (48%), Gaps = 108/815 (13%)

Query: 56  VEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQ 115
           ++Q+  IL EG+S E+ +Y+   ++ER+ I  AL  YYT  G+ +  +  + +HF  A Q
Sbjct: 1   MKQYLYILNEGTSKEVADYFQGAKFERLQIFCALAAYYTAEGRTQRDRNARADHFAKAAQ 60

Query: 116 YYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEA---DRDNVPALLGQACVE 172
               A +ID  +   ++G GQL +A+G+++ A   F     A    R N+   L  A V 
Sbjct: 61  LLGTARQIDYDDQLPFLGLGQLEMARGDMQSAKVHFTSAAAAQCNGRVNIAGTLALANVH 120

Query: 173 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 232
           F +G+YS +L  Y+RAL+ HP  P  +RLG+  C ++LGQ   A+ A++R L L P   E
Sbjct: 121 FQQGQYSPALGLYRRALKEHPGAPPEVRLGLAACLFRLGQCKLAKAAYERTLDLLPSCGE 180

Query: 233 ALVALAVMDLQANEA-AGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLT 291
           AL+ LAV+   + +   G R+G++ + RA++  P     L+ LA      G      +L 
Sbjct: 181 ALLGLAVIAFNSRDTEKGFREGLDLLCRAYDADPGQPGVLSLLARFCIQRGDWQRARELA 240

Query: 292 ETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQV 351
             A A +     ++ +    AR++H++G+Y  A   Y  + K   K      P YGL Q+
Sbjct: 241 TAAHAASESAGARALALTLQARAHHAEGNYNLAYRSYQQASKLDPK---LPLPLYGLAQI 297

Query: 352 QLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQ 411
            ++  +  +A++  E  L           ALG         + A +  R A + +     
Sbjct: 298 MVRQREQTNAISLLESAL-----------ALG---------QAAIDHFRDATEANSTSGS 337

Query: 412 AFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSF 471
            +  LGELL   D        +      K         +LNN  V+H   GE  +A    
Sbjct: 338 VWEMLGELLAPIDPPGPPLPLRLDPLPAK---------LLNNAAVLHMRGGEATAALDLM 388

Query: 472 KDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNL 531
           + AL           +  T+ +   A+                                 
Sbjct: 389 QKAL-----------QASTHSLPPPAA--------------------------------- 404

Query: 532 ARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGK 591
                   DT AA+  YR +L  +  Y D +LRLA IAK R +L  +++L  +AL+    
Sbjct: 405 -------GDTQAAARSYRAMLDAFPAYTDCHLRLACIAKHRGDLAGALKLTQKALEAKPG 457

Query: 592 YPNALSMLGDLELKNDDWVKAKETFRAASDATDGK-DSYATLSLGNWNYFAALRNEKRAP 650
            P+AL+M G L L+  D+ +A++ F+A       K D+Y  L L   N FA+  + +R  
Sbjct: 458 LPDALAMQGWLHLEARDFKRAEDAFQALIKEPSAKNDAYGWLGLACLN-FASAPSHRRLK 516

Query: 651 KLEATHLEKAKELYTR-------VIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQE 703
            ++     KA++LY R       V+ ++ +N+YAANG   VLAE+G  +++ ++ TQVQE
Sbjct: 517 VID-----KAQKLYGRAMSFFKHVLERNHANVYAANGIAAVLAEQGDIELAHNILTQVQE 571

Query: 704 AASGS-VFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYE 762
           A + S  F++MPD  IN+ +++ A G   LA+++Y + LRK+++ + A + LYLAR +Y+
Sbjct: 572 AVAASEGFLRMPDAPINMGNLFLALGKPKLAIQVYNSVLRKYFHGSHATLQLYLARAYYD 631

Query: 763 AEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTA-----DEVRSTVA 817
           A + +  +  LL+A+H+APS++ L F+  + MQ ++   L++TR        DE  + V 
Sbjct: 632 ATELKIARTVLLKAVHVAPSDHRLLFNIALTMQNYAVCLLKETRVEGDLSKLDEFDAAVM 691

Query: 818 ELENAVRVFSHLSAASNLHLHGFDEKKINTHVEYC 852
           +L  A R F  L+   + H  G D KK+  H+++C
Sbjct: 692 DLLQAHRFFEQLNNLGH-HKTGIDPKKLREHIDFC 725


>gi|307104062|gb|EFN52318.1| hypothetical protein CHLNCDRAFT_139104 [Chlorella variabilis]
          Length = 926

 Score =  293 bits (749), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 257/861 (29%), Positives = 400/861 (46%), Gaps = 159/861 (18%)

Query: 103 QREKEEHFIL---ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADR 159
           +R++ +  IL   +T+  ++A  ++M E    +  G + LAK E   A  AF+  +    
Sbjct: 58  ERDRGQRVILLSNSTKLCHRAQYLNMEEQLPELVLGAVALAKNEAMVARKAFEKAMRMRC 117

Query: 160 DNVPAL---LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKA 216
           +  P++   L  A + FN+  Y+D+L  YK+AL+  PSCP  +RLGI  C  K+G   KA
Sbjct: 118 NGRPSIAPHLALANLHFNQRNYTDALRLYKQALRSCPSCPPEVRLGIAACCLKMGNTDKA 177

Query: 217 RQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLAN 276
             A++R L+L P+   AL+ LAV+ L           +   + AFE  P     L  LA 
Sbjct: 178 ELAYKRTLELAPDCTPALLGLAVLKLH----------ISSEEEAFEQDPDNPFVLLLLA- 226

Query: 277 HFFFTGQHFLVEQ-LTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEI 335
                  HF + Q  ++ A  +    P                                 
Sbjct: 227 -------HFCLRQGFSDKAFQLDPKLP--------------------------------- 246

Query: 336 NKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKA 395
                   P  GL Q+++   + + A +  E VL   P   + L+ LG +Y +     K 
Sbjct: 247 -------LPKLGLAQMRVMNNEPQEAASILESVLIDAPQWIDALEVLGRVYPKTTSKSKV 299

Query: 396 QELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGE-------EVPI 448
               ++AA + P++   +  LG+LL S +   AL A+  A  L + A +        +P 
Sbjct: 300 VPQFKEAAALRPKNVGLWELLGDLLASLEPAGALKAYDKAIELRRAAAQADGVGSSHLPP 359

Query: 449 EVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLF 508
            +LNN  V+H   G                               D S S++  + MQ  
Sbjct: 360 RLLNNAAVLHLRAGN-----------------------------TDVSYSLMT-QAMQSA 389

Query: 509 HRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAI 568
            R  + G +  +   +VT+ +NLAR+ E      AA V Y+ +L ++  Y D  LRLA I
Sbjct: 390 ARPGSTGVNALV---QVTLGYNLARVKEACGSLKAAEVEYKELLKQFPQYGDCCLRLACI 446

Query: 569 AKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGK-D 627
           AKAR + + S                 L +     ++    V  ++      + TD K +
Sbjct: 447 AKARGDTKAS---------------GHLCLFTACSIQEAGMVH-EQVLDKLLEQTDSKQE 490

Query: 628 SYATLSLGNWNYFAAL---RNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVV 684
            +A L++ N + ++A    R E  A K E  H   A ELY RV+ +    ++AANG G V
Sbjct: 491 MFAKLAMANLHAYSAPSDRRKEDSAKKAE-VHYSHALELYRRVLEKDEGCIFAANGVGCV 549

Query: 685 LAEKGQFDVSKDLFTQVQEAASGS-VFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRK 743
           LAE G    +K++F QVQEA++ S  F++MPD WINLA+VY AQ  +  A++MY+N LRK
Sbjct: 550 LAELGNLTAAKEVFLQVQEASAASDGFLRMPDAWINLANVYLAQEQYTAAIQMYKNALRK 609

Query: 744 FYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQ----KFSA 799
           FY N  A ++LYLAR  Y+A+Q  + K +L +A+HLAP+++ LRFD  V MQ    +++ 
Sbjct: 610 FYDNRSALVMLYLARAQYDADQLPEAKCTLTKALHLAPTDHKLRFDVAVTMQACVLEWAV 669

Query: 800 STLQKTRRTAD-----EVRSTVAELENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKH 854
            TLQK R   D     + R  V +LE+A R F +L +      H  D +K+  H+ +   
Sbjct: 670 RTLQKKRPAGDPSRYEDFRRAVRDLEHAHRFFQYLHSLG--RGHQLDTRKLQQHINFVAK 727

Query: 855 LLDAAKIHREAAERE----------EQQNRQRQEAARQAALAEEARRKAEEQKKYLLEKR 904
               A  H E A  +           Q  +  QE +++  LAEE RRKAEE     +++R
Sbjct: 728 THGKALAHLERAREDAQKAAQRQAAAQAEKNAQETSKR--LAEE-RRKAEEG----VQRR 780

Query: 905 KLEDEQK----RLRQQEEHFQ 921
           K E++ +    RLRQ +E ++
Sbjct: 781 KQEEQARGNVERLRQLQEQWR 801


>gi|384497970|gb|EIE88461.1| hypothetical protein RO3G_13172 [Rhizopus delemar RA 99-880]
          Length = 880

 Score =  285 bits (730), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 238/862 (27%), Positives = 422/862 (48%), Gaps = 109/862 (12%)

Query: 81  ERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRI-DMHEPSTWVGKGQLLL 139
           +++ +L  +      L + +T + +++ H   A Q+ N+A RI + +EP T+V KG L L
Sbjct: 20  QKLPLLTLIATLNLRLARKQTDETQRQRHLDEAAQFINEADRIHNQYEP-TFVVKGNLYL 78

Query: 140 AKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGA- 198
              +V++A+ +F +VLE   + +PALLG+A ++++  +Y  +L+ Y+ AL+       A 
Sbjct: 79  LTRKVDEAARSFNMVLEKRPNCIPALLGRAKIQYHLQQYKAALKTYQDALKYSHGRFSAV 138

Query: 199 -IRLGIGLCRYKLGQLGKARQAFQRALQLDP-ENVEALVALAVMDLQAN---------EA 247
            IRLGI  C  +L    +A+ A +R +   P  N  AL+ LA+++L  +         + 
Sbjct: 139 EIRLGIAQCFAQLKMYHEAKIALKRCIDTSPAPNSTALIMLAIIELNESKDMENGALQQE 198

Query: 248 AGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHS 307
             +R G++ MQ++ +     A                      +  AL   ++  TK+ +
Sbjct: 199 TSLRHGLQHMQQSHQANTMAA----------------------SSRALNTASNNATKAEA 236

Query: 308 YYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEK 367
            Y +AR++H   DYE A  +Y  ++ E+N  H  I   +G+GQ Q+K G+  +A+  FEK
Sbjct: 237 SYQIARTHHQTEDYENAYKFYSQAL-ELNPDH--ILAQFGMGQTQIKRGEHDAAIEIFEK 293

Query: 368 VLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGA 427
           +    PD  E +K LG +Y  + + +K+  +  K  K         +D   LL      A
Sbjct: 294 LHASQPDCIEVMKVLGSLYGLVRKRDKSTAVFDKLLK--------HVDDDPLLYYQQALA 345

Query: 428 ALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSK 487
            ++         ++  +++  ++LNNI V+H   G++  A   +  A+            
Sbjct: 346 LINDLSEDEQAAQERIKQIKPQLLNNIAVMHHSLGKYSDAEHYYSLAIQ----------- 394

Query: 488 TKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVL 547
                 +A A+  + KD+                  K+T+ +NLARL E+  +T  A+ +
Sbjct: 395 ----ATEACAN--EEKDL------------------KLTMSYNLARLYEEKLETEKATAI 430

Query: 548 YRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKND 607
           Y  ++  Y  YVDA+LR+ AI ++      +IE   E          A  M+G  +  N 
Sbjct: 431 YTKLIEDYPSYVDAHLRMGAIEQSLGRSTEAIEYYKEVFDTEPLDAKAWIMIGQAQALNT 490

Query: 608 DWVKAKETFRAASDATDGKDSYATLSLGNWNYFAA--LRNEKRAPKLEATHLEKAKELYT 665
           + + +K +F       D  D Y  ++LGN++   A  L++EK A +  A   + A   Y+
Sbjct: 491 EKL-SKRSFEKVLKDCDKNDLYTHVALGNYHCMTARELKSEK-AKQQRADAYKLAANFYS 548

Query: 666 RVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYF 725
           + + +  +N+YAANG  + +AE G  + +KDLF QV+E+      V  P+VW+NLAH Y 
Sbjct: 549 QTLRRDPTNVYAANGLAITIAENGHIEQAKDLFNQVRESD-----VSNPNVWVNLAHAYV 603

Query: 726 AQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHY-------EAEQWQDCKKSLLRAIH 778
               +  A+ MY NC +KF+ N D  +LL LAR  Y       + E   +  K+  RA+H
Sbjct: 604 ELKQYKQAIVMYGNCSKKFFNNKDTNLLLCLARAQYILAKSEKDHETMYEALKNTERALH 663

Query: 779 LAPSNYTLRFDAGVAMQKFSA--STLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLH 836
           L P++ T  ++  +  Q ++   S L + +R +  +R  +  LE   R F  L +     
Sbjct: 664 LNPADKTTLYNLALVQQSYAQQISDLPQQQRDSASMRRAIGHLECGQRTFHTLISVEEHT 723

Query: 837 LHGFDEKKINTHVEYCKHLLDAAKIHREAAERE--EQQNRQRQEAARQAALAEEAR-RKA 893
           L  +D+K +     Y + L    ++ R+ AE+   E++ RQ+ E A++    E A+ R A
Sbjct: 724 L--YDKKIVEQRERYGETL--RTQLERKLAEQVQFEEEKRQKLEFAKKKREDEIAKQRAA 779

Query: 894 EEQKKYL--LEKRKLEDEQKRL 913
           EE+K+ L  +E++++E+ ++RL
Sbjct: 780 EEEKRRLEEVERQQMEEARRRL 801


>gi|403363721|gb|EJY81611.1| hypothetical protein OXYTRI_20875 [Oxytricha trifallax]
          Length = 1153

 Score =  284 bits (726), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 223/859 (25%), Positives = 400/859 (46%), Gaps = 90/859 (10%)

Query: 20  DQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQILEE---GSSPEIDEYYA 76
           D+LP D S +  +L+ E+ P+  W+  A  Y+K G+++ F+ +L E    +  + + +  
Sbjct: 24  DRLPADVSQLSFLLQREKVPIGYWVNAALMYYKSGQIKSFQFLLNEALKNNDKKQNPHLF 83

Query: 77  DVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQ 136
           D   +RI  LN L  +     + E  Q   ++ +       N A  + +  P T++ K  
Sbjct: 84  DTIEDRIDGLNRLASFQLAASEYELDQEAYDKMYAAGMNNINNADNLHIANPQTFITKCF 143

Query: 137 LLLAKGEVEQASSAFKIVLEADRDNVP---ALLGQACVEFNRGRYSDSLEFYKRALQVHP 193
            L+++G     ++  + V   D+ N     A++ +A +EF++  YS SLE  K  L  +P
Sbjct: 144 FLMSQGNF---TNTMQYVGHFDQLNYQHPLAMVIKAIIEFSKNNYSGSLELLKGVLAKNP 200

Query: 194 SCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAG-IRK 252
             P +IR  IGLC Y+LG + KAR AFQR + LD +N+ A+++LA++D+ +    G ++K
Sbjct: 201 RSPPSIRYAIGLCYYRLGNIEKARFAFQRVIDLDSQNIMAIMSLAIVDISSQYTDGEVQK 260

Query: 253 GMEK-MQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALA----------VTNHG 301
            +EK + +AFE+     + L YLA HFF      +  Q+    L                
Sbjct: 261 DIEKLLAKAFELDKRNPLVLRYLAEHFFQKKNFLVANQMCLNGLKSLDRYRRNENTVKEN 320

Query: 302 PT--------KSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQL 353
           P         KS   + L +  H   +Y++A  +Y  ++K     H +    + LG+V  
Sbjct: 321 PNFRKDLEYLKSDLNFILGKIQHIDENYQEALNFYQKAIK--TNSHNY-SAQFNLGKVYF 377

Query: 354 KLGDFRSALTNFEKVL--EIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQ 411
              +F+ A   FE +L  + + D  E L+ L     + G+I ++ EL ++  +++P+D +
Sbjct: 378 SFNNFQEAEHCFEALLANQKHKDCYEALRLLAQTKARQGKIPESVELFKRVLELNPQDFE 437

Query: 412 AFIDLGELLISSDTGAALDAFKTARTLLKKAGEE--------------VPIEVLNNIGVI 457
           A  ++ ++   +D  A+L  +++   +++   EE              +P E+L N+G +
Sbjct: 438 ANYEIAQMFEQTDPKASLVYYESGLRIMQHEIEERLRNKEELSQEDQIIPPEILINVGTL 497

Query: 458 HFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNH 517
             E G+ + A  SF  A+ +   L  L    +  +     S+L                 
Sbjct: 498 RLEVGKTQEAFDSFSQAIKNCNQLLELKKDDQKLI-----SIL----------------- 535

Query: 518 VELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQL 577
                  +T  FNL    EQ H    AS  Y+ I+     YVDAYLRL  +A+ R + + 
Sbjct: 536 -------ITSKFNLGCWYEQHHRYGEASDQYKQIIKMEPTYVDAYLRLGYLARNRGDYKR 588

Query: 578 SIELVNEALKVNGKYP-------NALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYA 630
           ++E ++E  K   K P       N L + G +     +  KA E FR   +    +DSYA
Sbjct: 589 ALEYIDEGKKNQIKKPEEYSKPINQLCIRGKILTDISELDKAYEEFRFVLEKLSNRDSYA 648

Query: 631 TLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQ 690
            +   N NY  + R  +   K +   L+KA + Y  V+ Q  +N +A  G   +L+E  +
Sbjct: 649 IIGQANINYEWSTRC-RHDIKQQEHLLKKAMDKYMIVLEQDEANAFATLGIANILSEHNK 707

Query: 691 FDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDA 750
            + S ++F  ++E         +    INL H+   Q N+  A+  Y   L KF  N + 
Sbjct: 708 INESMEIFKALKENCPN-----IHHALINLGHLSVYQENYIAAINFYNKALEKFDGNCNL 762

Query: 751 QILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTAD 810
           +I LYL++ +++   +++CKK L + +   P +  L+++ G+ + + +  T  K  R   
Sbjct: 763 EIELYLSKAYFKMHDYENCKKILQKLLVRYPQDLRLKYNLGLCLMQQANQTFNKNSRKVS 822

Query: 811 EVRSTVAELENAVRVFSHL 829
           E +  +A+L  A ++  H+
Sbjct: 823 ETQEAIAQLNYANKMIQHI 841


>gi|167535854|ref|XP_001749600.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163771992|gb|EDQ85651.1| predicted protein [Monosiga brevicollis MX1]
          Length = 1012

 Score =  273 bits (698), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 218/824 (26%), Positives = 386/824 (46%), Gaps = 100/824 (12%)

Query: 4   VYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQIL 63
           + +P Q+    + +  DQL +D  D++ +L  E+  L +WL I   Y +Q K ++F Q+ 
Sbjct: 11  IEVPCQDGAT-IDLDPDQL-QDVGDVILLLTTEKPELGIWLEIIDHYRRQSKWDEFEQLC 68

Query: 64  EEG--SSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFIL---ATQYYN 118
           +    S  +I E     R  R        ++  +L +   +  +  +   L   A Q   
Sbjct: 69  QVAIDSDIKIPEDREKRRQHRDNSGKLWALFSAFLMEQAKETSDPAKRNSLKNRARQLIT 128

Query: 119 KASRI------DMHEP-------STWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPAL 165
           K  ++      ++HE            G+ +      +++ A   F IVL  D  +  A 
Sbjct: 129 KGKQVKANKANNLHEAYLKLMDAEDRTGRAEQKARDKDLKDARVLFDIVLTEDTRDSIAR 188

Query: 166 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 225
           +G A V++ +G+Y D+L+ ++  L   P CP  IR+ I LC  +LG+L +A  AF R L+
Sbjct: 189 IGVARVDYMQGKYEDALQHFRAVLGDRPDCPVGIRVAIALCLAQLGRLDQATAAFARVLE 248

Query: 226 LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 285
           L+P NV ALVA AV+++   E + + +G + ++ A+ +       LN+LAN FF  G + 
Sbjct: 249 LEPHNVTALVATAVLEMNKAEDSSLAEGKKLLKEAYSLDNNNPNILNHLANLFFIKGAYD 308

Query: 286 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 345
            V  L+  A         ++ + +++AR YH + +Y++A  +Y  +V E   P  F+ P+
Sbjct: 309 KVLSLSRHAQNCRPTAAQRAETMFHMARVYHIQENYDEAFKHYYKAVHE--DP-AFVLPH 365

Query: 346 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLG---QIEKAQELLRKA 402
           +G+ Q+ ++   +  A+ + E V +  P N E++K L  +Y Q     Q  KA+ L ++ 
Sbjct: 366 FGVAQLYIEKRKYDKAIEHMEIVYKHQPGNYESMKVLASLYAQQDSRTQRNKAKSLFQQI 425

Query: 403 AKIDPRDAQAFIDLGELLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEK 461
             + P D +A+I+L  L  + +   A++ ++ A + L   A  +V  E+ NN+G ++F  
Sbjct: 426 TTLRPFDIEAWIELAMLHEAEEPAQAVELYERAIKDLEAVAASQVTPELKNNLGAVYFLV 485

Query: 462 GEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELP 521
             ++ A  +F+DA        ++    +    +A+                 DG  +   
Sbjct: 486 ERYDKAEAAFRDAF-------IMTENMRQQADEAT-----------------DGQAL--- 518

Query: 522 WNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIEL 581
              VT+ +NLAR +E  +    A ++Y+ +L ++  YVD YLRL  IA+ R         
Sbjct: 519 --GVTIQYNLARTMEATNRINEAIIIYKQLLKEHPAYVDCYLRLGTIARER--------- 567

Query: 582 VNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFA 641
                   G + NA           DD +  KE            D Y+ + L N     
Sbjct: 568 --------GDFLNAKQYY-------DDVLHFKE------------DGYSEMCLAN---IC 597

Query: 642 ALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQV 701
              +  + P ++      A++ Y +V+   + N+YAANG   VLA   ++  SKD+  QV
Sbjct: 598 LANDGHKKPGMDR---HAARQRYEKVLRADSHNIYAANGIACVLALDDEYSASKDILLQV 654

Query: 702 QEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHY 761
           +EA       +   +W NLAH+Y  Q +F  A+++Y+  L +F++N D  IL YL R  Y
Sbjct: 655 REAVGTD--RRAAQIWTNLAHLYVKQESFMEAIQLYKAVLSRFFHNRDTDILSYLMRAEY 712

Query: 762 EAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKT 805
           +A  + D  K+  + +HL P+     F+  +   + S  T+  T
Sbjct: 713 KAGLYHDAMKTSQKLVHLEPTEDRHWFNLAMCQLQVSKITIDAT 756


>gi|328766912|gb|EGF76964.1| hypothetical protein BATDEDRAFT_36145 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 1067

 Score =  273 bits (697), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 263/973 (27%), Positives = 451/973 (46%), Gaps = 87/973 (8%)

Query: 3   CVYIPVQNS---EEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQF 59
            + IP+  S    E + V L+ L  +   I+DIL +E   L L+L  A +Y K+  V++F
Sbjct: 5   SIEIPLLRSGQTNEVLEVDLNDLRANHDHIIDILTSEDGSLSLFLEFAFQYLKRDMVDEF 64

Query: 60  RQILEEGSSPEIDEYYADVRYER--IAILNALGVYYTYLGKIETKQREKEEHFILATQYY 117
              L++G   EI +     R E   I ILN L  +Y    K E+     ++    ATQ  
Sbjct: 65  EIFLQKGR--EIGQARNSRREENSLILILNTLASHYIEKAKSESDPSIHDQFIANATQIL 122

Query: 118 NKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGR 177
           N A R+D     T VGK  ++L++ +++QA   F+  L  + + +PAL+G +CV F +  
Sbjct: 123 NDAERLDRMHLYTIVGKANVMLSRNQLDQALYTFRGALNQEPNFLPALIGSSCVHFLKQD 182

Query: 178 YSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVAL 237
           +  +L  Y+  L+++P+    +R+ IG+C ++LG   KA  AF RA+ L+P+N++AL  L
Sbjct: 183 FKSALAGYQTILRINPTIKPDVRIPIGICFHRLGMEKKAHAAFLRAVSLNPDNLDALALL 242

Query: 238 AVMDLQANEAAGIRKGMEK-----------MQRAFEIYPYCAMALNYLANHFFFTGQHFL 286
           ++  L+ N A       E+           + R +      ++  N +++ FF  G +  
Sbjct: 243 SI--LENNRAISTTATPEEKNTAMTAAGGYLARGYRQNNRHSIIFNLMSDRFFSKGDYGK 300

Query: 287 VEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYY 346
               +E+AL +     + + SY    +   ++ +Y+   L Y   VK      + +   +
Sbjct: 301 ARVFSESALRLPGSKMSCADSYALRGKIAQAEMNYD---LAYTCFVKASELNPDSVLIQF 357

Query: 347 GLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQL-GQIEKAQELLRKAAKI 405
           GLGQ+Q+    F  A+   EKVL   PDN E L     IY QL    +K  E L +  KI
Sbjct: 358 GLGQLQIYKKQFDEAMVPLEKVLAKVPDNYEALAIATEIYAQLPDSAQKVSEKLDRLKKI 417

Query: 406 ------------DPRDAQAFIDLGELLI-------SSDTGAALDAFKTARTLLKKAGE-E 445
                          D   +I+  ELLI         D   A  AF  A  +L+   +  
Sbjct: 418 FRSYFEEEHGFKAKTDDDEYINDPELLIVIGCYFSKQDLKQAEKAFDRAIRILETIPDMS 477

Query: 446 VPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDM 505
           V  E+ NN+G ++    +    H S    LG     +L DS++   +++ + S   F D 
Sbjct: 478 VAPELFNNLGALYHLDAQQLIQHAS---DLGSSRPTSLGDSRSALQLLELAKS---FYD- 530

Query: 506 QLFHRFENDGNHVELPWN-----KVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVD 560
                FE     VE P +     + TV +NLARL E + DT  A   Y  IL  +  YVD
Sbjct: 531 ---RAFEASPTTVE-PGDASDILQTTVRYNLARLNETLGDTEKAKAQYLAILNDHPAYVD 586

Query: 561 AYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAAS 620
             LRL  I++   +   +++  ++AL ++     A S++ +  L++     A++ F    
Sbjct: 587 CLLRLGYISQNSGDNATALDRYSDALAIDENNVKAWSLVANAHLESKALRPARKAFEKIL 646

Query: 621 DATDGKDSYATLSLGNWNYFAALRNEKRAPKL-------EATHLEKAKELYTRVIVQHTS 673
              D  D ++  S GN     A R + +  KL          H ++A E +T+ +   + 
Sbjct: 647 QEIDKYDMFSLCSTGNMCLKFA-RTDSKQDKLFLGIGVQRDIHCKRAVEFFTKALRLDSR 705

Query: 674 NLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALA 733
           N+YAA G  +  A  G  D ++++ TQ+QEAA  ++     +V +NLAH+    G    A
Sbjct: 706 NMYAATGIAIAFAYFGDMDEAREILTQIQEAAGTNI-----NVTLNLAHILVELGLPHSA 760

Query: 734 MKMYQNCLRKFYYNTDAQILLYLARTHY---EAEQWQDCKKS----LLRAIHLAPSNYTL 786
           + +Y++ ++K     D  ++  LAR HY   + E+  D   +    L  A  L P++  L
Sbjct: 761 IPLYES-IKKRSTTADIDVIRSLARAHYIIAKTEKLPDAMATVAARLKEACDLKPNDLAL 819

Query: 787 RFDAGVAMQKFSA--STLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGFDEKK 844
           +++  +A Q+++   +   K +R    +RS V  LE + + F  LS        G+D ++
Sbjct: 820 QYNLALAKQQYAQILNEQPKEKRPLSLLRSAVIGLEASEKTFEELSKHKPNPQLGYDVER 879

Query: 845 INTHVEYCKHLLDAA--KIHREAAEREEQQNRQRQEAARQAALAEEARRKAEEQKKYLLE 902
                +Y K +      KIH       +++ R  +  A++   AE  R  +EE+++ L E
Sbjct: 880 AKERAKYSKGVRRTTEKKIHETEVLDSQREERLAEIRAKREEAAEIKR--SEEKQRALNE 937

Query: 903 KRKLEDEQKRLRQ 915
           + +LE+  ++ R+
Sbjct: 938 QLRLEELDRKRRE 950


>gi|195489044|ref|XP_002092570.1| GE14267 [Drosophila yakuba]
 gi|194178671|gb|EDW92282.1| GE14267 [Drosophila yakuba]
          Length = 940

 Score =  271 bits (692), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 222/796 (27%), Positives = 372/796 (46%), Gaps = 82/796 (10%)

Query: 127 EPSTWVGKGQL-LLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFY 185
           +P   V KG L +L+    + A + F  VL   R N+ AL+G+AC+ +NR  Y  +L ++
Sbjct: 90  DPHLQVTKGYLWMLSSSRAQDADALFIRVLRKQRRNILALIGRACLAYNRQDYIGALGYF 149

Query: 186 KRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQAN 245
           K  L + P  P  +R+GIG C   +G+L KAR +FQ AL+ + +   A++ LA++ L   
Sbjct: 150 KSVLMIQPQGPVDVRVGIGHCFRMMGELEKARMSFQMALEYNAQCQNAMLGLALIKLNQR 209

Query: 246 EAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKS 305
           E    ++G   +  AF++  +    L+ LA+ ++  G H +V  L   AL  T+    +S
Sbjct: 210 EEQTYQEGKLLLAAAFDLNKHNPDVLSILASLYYLDGNHKMVWCLAGNALRSTDSKQMES 269

Query: 306 HSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNF 365
            +Y+ +A+SYH+ G +E A  +Y+ SVK    P  ++ PY G+ Q+ L  G+   A    
Sbjct: 270 LNYFQIAKSYHATGQFESAKKFYVLSVKV--APEGYVLPYVGMAQMYLNEGELHRAKACL 327

Query: 366 EKVLEIYPDNCETLKALGHIYVQ---LGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS 422
           E  L+  PD    +  L  IY++    GQIEKA E+L K      RD  +++ L      
Sbjct: 328 EAFLKYEPDEPVVMGLLAKIYLEERSPGQIEKAIEMLVKVVASYSRDFNSWLSLAFAYEQ 387

Query: 423 SDTGA-ALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWL 481
                  ++A++ A ++    G  +PIE LNN+            A ++  DAL      
Sbjct: 388 KRLWPQTVNAYQKAISICSVQGHHIPIEWLNNLANSQLMAKMPAQALETLDDAL------ 441

Query: 482 TLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDT 541
               SK +T                      ++G+H     N +T+ +N   +LE++H  
Sbjct: 442 ----SKCRT----------------------SNGDHKTT--NLLTLHYNRGLVLEELHRF 473

Query: 542 VAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGD 601
             A   Y+ I+  Y  Y D YLRL  +A  +N L  +IE   + L  +     A + +GD
Sbjct: 474 DLAEENYKGIIKGYPTYYDCYLRLGVMAMQKNELAHAIEYFKDVLNEDNSSLTARTYMGD 533

Query: 602 L--ELKNDDWVKAKETFRAASDATDGKDSYATLSLGNW-----NYFAALRNEKRAPKLEA 654
               L  D +         AS  +  KD+Y T+++GN+       + A  N + A K + 
Sbjct: 534 CFNRLSLDKYATFNYNMILASQ-SKFKDTYVTMAMGNFCLKKLQTWMAGGNFRAARKQQ- 591

Query: 655 THLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMP 714
              EKA   +  V+  +  NL+AANG G VL+          +F Q+ E+ +      +P
Sbjct: 592 ---EKALHFFGTVLDCNPRNLWAANGIGAVLSSCKNLSAGAAIFMQIIESGNKC----LP 644

Query: 715 DVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLL 774
            + +N AH+   +G + LA++ Y+ CL+ F       ++ YLA+  Y+    +  K  LL
Sbjct: 645 AI-LNSAHIALERGQYRLAIQTYERCLKDFLPKNCVDVMHYLAKALYDEGSTRQAKMWLL 703

Query: 775 RAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASN 834
           +  HLAP +  + F+  + ++K +   L   R   DE++S V EL+ A   F HL+    
Sbjct: 704 KVRHLAPQDPFVIFNLALTIKKEADQALALPRPQLDELKSIVEELKVAYNYFYHLN---- 759

Query: 835 LHLHGFDEKKINTHVEY-----CKHLLDAAKIHRE--------AAEREEQQNRQRQEAAR 881
                 +  KI+ H        C+ L+    + ++        A +R   QN++ Q  A 
Sbjct: 760 -----LNHPKISVHASAKCANECQKLMVDLVVKQDQVRESLASAEDRIRLQNQRYQ--AH 812

Query: 882 QAALAEEARRKAEEQK 897
              L ++AR++ EE +
Sbjct: 813 LEHLRQQARQREEEDR 828


>gi|223995619|ref|XP_002287483.1| hypothetical protein THAPSDRAFT_268346 [Thalassiosira pseudonana
           CCMP1335]
 gi|220976599|gb|EED94926.1| hypothetical protein THAPSDRAFT_268346 [Thalassiosira pseudonana
           CCMP1335]
          Length = 891

 Score =  267 bits (682), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 233/787 (29%), Positives = 388/787 (49%), Gaps = 78/787 (9%)

Query: 130 TWVGKGQLLLAKGEVEQASSAF-KIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRA 188
           TW+G+G L LA   ++QA   F ++ L    + +PAL+G A V++    Y+ + + Y R+
Sbjct: 2   TWIGRGMLNLAMNRIDQARFFFEQLTLRECGEILPALIGMAAVKYMEKDYTGAQDLYARS 61

Query: 189 LQVHPSCPGA-IRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMD------ 241
           +   P   GA  R+G G+  YKLGQ+ +A+ AF+RA ++DPENVEALV +AV++      
Sbjct: 62  MTKFPVQSGAATRVGFGMACYKLGQMDRAKAAFRRAQEMDPENVEALVGIAVLEMASLDD 121

Query: 242 -LQANEAAGIRKGMEKMQRAFEIYPYC-AMALNYLANHFFF--TGQHF-LVEQLTETALA 296
            L   E     + + KM     +  +  AM  N+LANH+F+  T + +  V  L + A  
Sbjct: 122 VLDPREYRAEAENVIKMISMANLVDHTNAMVQNHLANHYFWKWTPKDYDRVLSLAKGAYN 181

Query: 297 VTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLG 356
            TN    ++ S Y LAR YH++G+ E A  +Y  + K  + P E     +GL Q  +   
Sbjct: 182 ATNIPEMQAESLYMLARVYHARGEMELANKFYDKACK--HSP-ELSPARFGLAQTLIWDE 238

Query: 357 DFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQEL-LRKAAKIDPRDAQAFID 415
            +  A  +   +L    +  + L ALG + V+ G+  +   + L+KA  +DP +A   + 
Sbjct: 239 AYDEAAAHLRLLLGTCSNATDALAALGLLEVKGGKDRREAFIYLKKAIDLDPFNAD--LV 296

Query: 416 LGELLI----SSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSF 471
           L E L      SD   +LD ++ A  LL+   + VP +VL N+G +H         H   
Sbjct: 297 LIEALALQQNESDYLLSLDRYRKAVRLLEAQQKIVPADVLTNMGALHI--------HLKS 348

Query: 472 KDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNL 531
             AL +G                   S +  K      R  N  +        ++V FNL
Sbjct: 349 VVALNEG------------------ESAISVKKSN--GRLRNASS--------ISVAFNL 380

Query: 532 ARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGK 591
           ARL E     V A  L++ I+ ++  YV++YLRLA IA+   +L+   E +  A+ V   
Sbjct: 381 ARLHEAAGRIVPAVELHKAIVKRHPSYVNSYLRLACIARDCGSLKDCSEWLKSAVAVAPG 440

Query: 592 YPNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYFAALRNEKRAP 650
            P  L+++G+L L   DW  A++ F +         ++Y+ LSLGN  YF    N    P
Sbjct: 441 NPEVLTLVGNLHLSLCDWAPAQKVFDQLLIQKVPKVEAYSMLSLGNI-YF----NNLNTP 495

Query: 651 KLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVF 710
           K  + HL+ A + Y R++ +  +N YAANG G VLAE+G+   +K++F +V+E +  ++ 
Sbjct: 496 KKYSKHLQHAADFYRRILSKDNANAYAANGLGTVLAERGELFKAKEVFNRVREVSGDTIL 555

Query: 711 VQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTD--AQILLYLARTHYEAEQWQD 768
               D  +NL H+Y AQ   + A++MYQ+ + +   + D  A++LLY+A  +++  +  +
Sbjct: 556 ----DCLLNLGHIYLAQKKHSEALQMYQSYMNRTRASDDDEAEVLLYIAFAYFDWARQTE 611

Query: 769 CKKSLLRAIHLAPSNYTLRFD--AGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVF 826
              S+L+   +        +D  A   +QK +    +  RRTA EV+  +  LE ++ + 
Sbjct: 612 FALSILKWQWVEARRRMSPYDTIANCVLQKVN----RNIRRTAQEVKYALDGLEESLAIV 667

Query: 827 -SHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEAARQAAL 885
            + L   S           +      CKH +D+AK H     ++E++ +  ++  R  A 
Sbjct: 668 QTMLQWKSEGKKVTVPTGMLTDFASQCKHNIDSAKSHLNEELKKEKEAQVLRDFQRIEAE 727

Query: 886 AEEARRK 892
           A E +R+
Sbjct: 728 ATEKQRQ 734


>gi|195429292|ref|XP_002062697.1| GK19554 [Drosophila willistoni]
 gi|194158782|gb|EDW73683.1| GK19554 [Drosophila willistoni]
          Length = 1025

 Score =  264 bits (675), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 211/819 (25%), Positives = 380/819 (46%), Gaps = 61/819 (7%)

Query: 25  DASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIA 84
           +  D+L  L A++  L  W+  A  Y+   + E F  +LE  +  +  + Y   + + I 
Sbjct: 11  NVHDLLFELSAKRLNLRTWIQKALLYYSARQFESFVMLLE-AAIVKSGKLYVGYKEDLIR 69

Query: 85  ILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKG-QLLLAKGE 143
               L  Y+T +   ET  R       + T   N A  +  ++    V +   ++L+ G 
Sbjct: 70  TYTLLAGYFTNMAYRETGNRRAALQAKI-TNLLNAAQGLQPNDRQYSVVRAYAMMLSSGR 128

Query: 144 VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGI 203
            + A + F  +L+    NVP L+G+ C+ +NR  YS +L ++K  L  +P  PG +R+G+
Sbjct: 129 SQDADNIFLSILKIMPHNVPCLIGRGCLAYNRRDYSGALGYFKSVLMHYPRGPGDVRVGV 188

Query: 204 GLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEI 263
           G C  K+  +  AR+AF+ AL+ +     ALV +AV+ L   +    ++ +  +  A+E 
Sbjct: 189 GHCFLKMDSVDWARRAFELALECNGRCQNALVGMAVIKLNVLDKQSQQEAIYLLCAAYEQ 248

Query: 264 YPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEK 323
           Y    M L+ LA H+++   +  V+ L   A+A T+    ++ ++  +ARS+H+ G +++
Sbjct: 249 YNRDPMILSCLAQHYYYVKSYERVQTLAGNAIAHTDSAELRAQNFLQIARSFHATGHFDR 308

Query: 324 AGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALG 383
           A  +Y  SVK    P+ +  P+ GL Q+ ++      A+   E +++I P+N   L+ L 
Sbjct: 309 AFEFYKMSVKSC--PNGYAPPHLGLAQMYMRRNQLDKAMNCLETLIKIVPNNLYGLRLLS 366

Query: 384 HIYVQLG---QIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAAL-----DAFKTA 435
            +YVQ     +++ A E L K+  + PR  + F D+  +   +     L      +++ A
Sbjct: 367 MLYVQDNAGPKVDGALEFLNKSLGLSPRLNKDF-DIWLIYARAYENKELWSQTIKSYEQA 425

Query: 436 RTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDA 495
             + +  G+ +P+E+ NN+G       + + A             L  LD          
Sbjct: 426 VKIFQDIGQSIPVELFNNLGASLMYGKQPQKA-------------LVTLD---------- 462

Query: 496 SASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKY 555
                        H    D N      N++T+ FN AR+LE++H    A  LY+ ++ +Y
Sbjct: 463 -------------HALAGDTNES----NRLTISFNRARVLEELHREDLAENLYKHLIQEY 505

Query: 556 QDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKET 615
             Y+D Y+RL  +A  R+    +++   E LKV+    +A  ++G+  +K+    +A   
Sbjct: 506 PKYIDCYIRLGKMAAKRHQYVTAMDYYKEVLKVDNDNLSARCLMGNYFMKHGMTTQAMYC 565

Query: 616 FRAASDATDG-KDSYATLSLGNWNYFAALRNEKR-APKLEATHLEKAKELYTRVIVQHTS 673
                   +  +DSY  +++GN       R   R        H EKA +L+ R + Q+  
Sbjct: 566 HNVILRRRETRRDSYTMVAVGNVCLINVHRTFGRLEDSTSKRHQEKALQLFRRALEQNPR 625

Query: 674 NLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALA 733
           NL+AANG G  L   G  +  + +F Q+ E++            +NLA+V      +  A
Sbjct: 626 NLWAANGIGAALCAGGLLNEGEAVFKQILESSKYCT-----QSLLNLANVSLELKKYKQA 680

Query: 734 MKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVA 793
            +MY+ CL  F       I+  LAR+ Y   + ++ K  LL+A H+AP +  L ++  V 
Sbjct: 681 SQMYKQCLDDFLPPKSVAIMQLLARSLYLGGKAKEAKFVLLQARHVAPHDLILLYNLAVT 740

Query: 794 MQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAA 832
           ++++S       R    E+     EL+ A+R F  L A+
Sbjct: 741 IKQYSLMVFGMQRPDLKELMLAEQELKVALRYFDGLVAS 779


>gi|414585832|tpg|DAA36403.1| TPA: hypothetical protein ZEAMMB73_637393, partial [Zea mays]
          Length = 184

 Score =  264 bits (675), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 127/175 (72%), Positives = 147/175 (84%), Gaps = 1/175 (0%)

Query: 1   MACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFR 60
           M  VYIPVQ +EEEV+VALDQLP DASDILDILKAEQAPL LWLIIAREYFKQGK+EQFR
Sbjct: 1   MTSVYIPVQGTEEEVQVALDQLPHDASDILDILKAEQAPLHLWLIIAREYFKQGKIEQFR 60

Query: 61  QILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKA 120
           QILEEGS PEIDEYYADV+YERIAIL ALG ++T+LGK++ +  +KE HF  ATQYYN+A
Sbjct: 61  QILEEGSGPEIDEYYADVKYERIAILTALGAFHTFLGKVD-RAPQKESHFKDATQYYNRA 119

Query: 121 SRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNR 175
           SRID  EPSTW+G+GQL +AKGE++ AS +FKIVL+ D +N PALLGQ      R
Sbjct: 120 SRIDETEPSTWIGRGQLCIAKGELQMASDSFKIVLDEDENNFPALLGQVIFRLFR 174


>gi|325186228|emb|CCA20729.1| RNA polymeraseassociated protein CTR9 putative [Albugo laibachii
            Nc14]
          Length = 1135

 Score =  263 bits (671), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 194/672 (28%), Positives = 340/672 (50%), Gaps = 74/672 (11%)

Query: 290  LTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLG 349
            L   A   T     +S S Y + R  H++G Y+ A  YY  + +  +    F+ P++GL 
Sbjct: 381  LAGNAFHSTKIAEIRSESCYFMGRGCHAQGKYKDAYSYYFNAGRLWSN---FVLPWFGLA 437

Query: 350  QVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRD 409
            Q+  +  ++  A  N EK  + YP+N E L  LG++Y +LG+ + A  LLR+   ++P +
Sbjct: 438  QMYYERKEYGKAAINLEKANKAYPENVEILSLLGNVYGKLGKKDDAIILLRRVVDLEPGN 497

Query: 410  AQAFIDLGELLISS----DTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFE 465
              A I   ELL  S    D   A+ ++  A  +++ A + +P+E+  N+GV+    G+ +
Sbjct: 498  VDALITTAELLHGSNDRKDQIIAISSYIAAEKVMRNALDTIPMELYVNLGVLQHRVGKIK 557

Query: 466  SAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHV--ELPW- 522
             A   FK AL +     LL  +  T  ++ + +               D N +  ELP  
Sbjct: 558  EAIACFKQALNE-----LLRHEATTESLEETKT---------------DTNDLVQELPSP 597

Query: 523  NK--VTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIE 580
            NK  VTVL+NLAR+  +I D + A  LY  IL K+  Y+DA LRL  + +    +  + +
Sbjct: 598  NKLNVTVLYNLARVYGEIGDRIVAQTLYENILRKFPTYIDAILRLGCMRRDAGAMAEAAQ 657

Query: 581  LVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGK-DSYATLSLGNWNY 639
               +AL+V+     A  + G++ L   +W+ A++ +       + K D YA LS+GN  +
Sbjct: 658  YFEKALEVDPFCAEACLLHGNMHLDRREWLLAQKKYERVMGMPNMKNDPYAFLSMGNI-F 716

Query: 640  FAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFT 699
               L  + R  K    ++  ++  + + I    SNL AANG G ++AEKG  + +K +FT
Sbjct: 717  MCNLGEKNRYTK----NMSLSEGYFKKTIQSQPSNLQAANGLGTLVAEKGNLESAKLIFT 772

Query: 700  QVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLART 759
            QV+EA+      +  D W+NLAH+  A+  +A A+++Y  CL K Y+  D +++LYLA+ 
Sbjct: 773  QVREASP-----ETADAWVNLAHILVAEERYAEAIQLYTVCLAKCYHGRDLEVMLYLAKA 827

Query: 760  HYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQK-----------TRRT 808
            +YE++ +  C K+L RA+H+ P++  L ++  +A + ++ +TL +           T+RT
Sbjct: 828  YYESKDYPKCIKTLSRALHINPTDLRLWYNLALAQEDYAVTTLGQESTPQAGQHLVTQRT 887

Query: 809  ADEVRSTVAELENAVRVFSHL----------SAASNLHLHGFDEKKINTHVEYCKHLLDA 858
              +V+  V +L  + + F  L           +  +     F+++K+  H ++C   L  
Sbjct: 888  MADVQRAVLDLSKSQKTFHFLLQLMEAQGASKSKGSSGSFPFEKEKVIDHEKFCADTLTK 947

Query: 859  AKIHREAAEREEQQNRQRQEAARQAALAEEARRKAEEQKKYLLEKRKLEDEQKR-----L 913
            A  H E   ++E+++R   EA R+     E R + E++      +RK ++E +R     L
Sbjct: 948  ASYHLEFERQKEEKHRLEVEAQRKMLREYEDRVEREKET-----ERKKDEELRRHRADVL 1002

Query: 914  RQQEEHFQRVKA 925
             +QEE  + + A
Sbjct: 1003 MKQEERLKALSA 1014



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 112/286 (39%), Positives = 156/286 (54%), Gaps = 12/286 (4%)

Query: 6   IPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQILEE 65
           IPV+NS++EV V  D+LP D +DI+DIL+AE A LD+WL  A EY+ QG V QF++IL  
Sbjct: 12  IPVKNSDQEVEVFTDELPDDVNDIMDILRAELAALDIWLQFAVEYYNQGCVNQFQEILSV 71

Query: 66  GSSPEIDEYYAD--VRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRI 123
            S P I+E Y D   R  RI   NAL  +       E  +++KE     A  Y+ +A R+
Sbjct: 72  ASEPGIEEIYKDQASRVCRIKFFNALACHAINSMWNEEDEKKKEAIAQRAVGYFQRADRL 131

Query: 124 DMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLE 183
           D   P T +GK  + +AK E E+A    K VL  DR N+PALL  A + + R +YSD+  
Sbjct: 132 DHQYPMTLIGKALMFMAKNEDERAERFLKSVLRTDRQNLPALLANAMLLYRRKKYSDAKR 191

Query: 184 FYKRALQVHPSCPGA--IRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMD 241
               A+++HP  P    +R+    C Y LG   KAR   +    LD  NV+A++A A+  
Sbjct: 192 LCLEAIKLHPKSPQGSRMRMFFSYCCYHLGCTEKARAVMKYGASLDDTNVDAVIANALWQ 251

Query: 242 LQA----NEAAGIR----KGMEKMQRAFEIYPYCAMALNYLANHFF 279
           L +      A  IR    + M  ++ A  I     M LN+LANH+F
Sbjct: 252 LASLTREERAKSIRNEGSRFMTMIRHAHAIDKTNPMVLNHLANHYF 297


>gi|67967697|dbj|BAE00331.1| unnamed protein product [Macaca fascicularis]
          Length = 403

 Score =  262 bits (669), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 163/433 (37%), Positives = 241/433 (55%), Gaps = 41/433 (9%)

Query: 178 YSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVAL 237
           Y  +L +YK+AL+ +P CP  +RLG+G C  KL +L KAR AF RAL+L+ + V ALV L
Sbjct: 2   YRGALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALELNSKCVGALVGL 61

Query: 238 AVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAV 297
           AV++L   EA  I+ G++ + RA+ I P   M LN+LANHFFF   +  V+ L   A   
Sbjct: 62  AVLELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFHN 121

Query: 298 TNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGD 357
           T     ++ S Y LARS+H + DY++A  YY  + +  +    F+ P++GLGQ+ +  GD
Sbjct: 122 TEVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASS--SFVLPFFGLGQMYIYRGD 179

Query: 358 FRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKIDPRDAQAFI 414
             +A   FEKVL+ YP+N ET+K LG +Y      EK   A+  L+K  +  P D +A+I
Sbjct: 180 KENASQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKVTEQYPDDVEAWI 239

Query: 415 DLGELLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKD 473
           +L ++L  +D   AL A+ TA R L +K   +VP E+LNN+G +HF  G    A + F  
Sbjct: 240 ELAQVLEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYF-- 297

Query: 474 ALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWN--KVTVLFNL 531
                  L  LD                        R + +  H E  +N   VT  +NL
Sbjct: 298 -------LASLD------------------------RAKAEAEHDEHYYNAISVTTSYNL 326

Query: 532 ARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGK 591
           ARL E + +   A  LY+ IL ++ +YVD YLRL A+A+ + N   + +   EAL++N  
Sbjct: 327 ARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEASDWFKEALQINQD 386

Query: 592 YPNALSMLGDLEL 604
           +P+A S++G+L L
Sbjct: 387 HPDAWSLIGNLHL 399


>gi|195380573|ref|XP_002049045.1| GJ21372 [Drosophila virilis]
 gi|194143842|gb|EDW60238.1| GJ21372 [Drosophila virilis]
          Length = 1254

 Score =  260 bits (665), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 226/898 (25%), Positives = 420/898 (46%), Gaps = 80/898 (8%)

Query: 25  DASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIA 84
           D  ++L+ L +++  L  W+  A  Y+ Q + E F  +LE   +    + Y   + + + 
Sbjct: 6   DVQEVLNALCSKRVKLREWIQKAWAYYHQNQFEGFVLLLENAITRGF-KTYPGYKEDLLK 64

Query: 85  ILNALGVYYTYLGKIETKQREK--EEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKG 142
           I   L  ++  L   E   R    +E      Q  +    +    P        L+L + 
Sbjct: 65  IHTLLAAHFFRLACSEHGNRRAMWQEKVSQQLQIMDSMQLVSNDLPHLLCRGFALMLTEA 124

Query: 143 EVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLG 202
            ++ A + F  VL     +VPALLG+AC+ +NR  Y  +L ++K  LQ HP  P  +R+G
Sbjct: 125 RLQDADNHFVSVLRQMPYSVPALLGRACLAYNRQEYRVALGYFKSVLQHHPHGPADVRVG 184

Query: 203 IGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFE 262
           I  C  ++G L  AR+AF+ A+Q +   + AL+ +A + L   + A   +    +  AFE
Sbjct: 185 IAHCFLQMGDLDSARRAFEMAVQRNGRCINALLGIAQLKLNERQRAANMEATNLLCAAFE 244

Query: 263 IYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYE 322
           +     + L++LA + +++  +  ++     A  +T++   K+ + + +ARS+H++ +++
Sbjct: 245 LNHRHPVVLSWLACYLYYSRNYGKMQTAAGNAYLITDNPLLKAQNCFLIARSFHAQSNFD 304

Query: 323 KAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKAL 382
           +A  +Y  ++K ++   E+  PY G+ Q+ ++ G    A  +   +L++ PDN   L+ L
Sbjct: 305 RAFDFYGKALKCLS---EYAPPYLGIAQMYVRRGQLDLAEHSLRSLLKLLPDNPHGLRML 361

Query: 383 GHIYVQL---GQIEKAQELLRKA-AKIDPRDAQAFIDLGELLISSDT-------GAALDA 431
             +Y Q    G+++KA +L + A  +   RD     D    L  + T         A+DA
Sbjct: 362 ATLYAQADSPGKLDKAIQLFKSALERPGARD-----DYDTWLGLAGTYERLQLWEQAIDA 416

Query: 432 FKTARTL---LKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKT 488
           ++ A ++   L+K  +E PI  LNN+  +    G+ E+A Q+   AL         + K 
Sbjct: 417 YEQAVSIYLRLQKTTKEAPIAWLNNVAALQLHAGQPEAALQTLDKALS-------TNPKG 469

Query: 489 KTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLY 548
            T                          H E   N +T+ FN AR+LE++H    A   Y
Sbjct: 470 AT------------------------QEHCEC--NILTMRFNRARVLEELHLADQAEDSY 503

Query: 549 RLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDD 608
           + ++ +Y +Y D+YLRL  +AK RN + +++E     L++      A + LG+L  K   
Sbjct: 504 KQLIAEYPNYYDSYLRLGIMAKDRNQIIMAMEYFKAVLQLENDNVAARTYLGNLYAKQGA 563

Query: 609 WVKAKETFRAASDATDG-KDSYATLSLGNWNYFAALRNEKRAP-KLEATHLEKAKELYTR 666
             +A   +           DSY  +++GN       R       ++   + E A +L+ +
Sbjct: 564 LSQAMCNYNVIMRRPGSFGDSYMLVAVGNVCLVKVQRTTANGQLEMAKQYQENALQLFRK 623

Query: 667 VIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFA 726
            + Q+  NL+AANG GV L+  G     + +F Q+ E++      +  +  +N AH+   
Sbjct: 624 ALEQNQRNLWAANGIGVALSNHGHLADGESIFKQIVESSK-----RCTEAILNTAHIAME 678

Query: 727 QGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTL 786
           Q ++  A+ +Y+ CL++F      + +  LA+  Y+  Q+++ KK L +A H+AP +  +
Sbjct: 679 QEHYTEAIDIYKQCLKEFLPTNSVKEMHLLAKAFYQTGQFEEAKKLLQKARHVAPQDLMI 738

Query: 787 RFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGFDEKKIN 846
            ++ G+ +++    T  K R    E++    EL+ A  +F +L         G  E+ + 
Sbjct: 739 LYNLGIVIKQDIRQTYGKQRTDRTELQRAEQELKMAQSIFQYL---------GDKEESLQ 789

Query: 847 T---HVEYCKHLL-DAAKIHREAAERE--EQQNRQRQEAARQAALAEEARRKAEEQKK 898
           T       C  LL +  +  +  +E +  E++  +RQ+  R  A A+E  RK +  KK
Sbjct: 790 TAYKQANKCSKLLANVMEDFKNLSELDEVEKKTEERQKVKRDKAKAKEISRKKDYSKK 847


>gi|194756148|ref|XP_001960341.1| GF11564 [Drosophila ananassae]
 gi|190621639|gb|EDV37163.1| GF11564 [Drosophila ananassae]
          Length = 1112

 Score =  254 bits (648), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 223/828 (26%), Positives = 376/828 (45%), Gaps = 80/828 (9%)

Query: 25  DASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQILEEGSSPEI--DEYYADVRYER 82
           +A D +  L  E+ PL  W+  A  Y+  G+ E F Q+LE   S  +     Y D     
Sbjct: 16  EAQDAVSKLAIERYPLRHWINHALSYYSNGQFENFVQVLEAAISRCLKSSSSYRD----- 70

Query: 83  IAILNALGVYYTYLGKIETKQREKE---EHFILATQYYNKASRID----MHEPSTWVGKG 135
                 L   Y  L    T+Q  KE      +L  +  N    +D    + E +  V KG
Sbjct: 71  -----DLARAYAVLVAGTTRQAYKELGNRRAVLMAKLTNIFRVLDGMQRVQERTVLVTKG 125

Query: 136 -QLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS 194
              +L      +A   F  VL     NV AL+G+ C+ + R  Y  +L F+K  L   P 
Sbjct: 126 YAFMLTAVRAAEADGLFVNVLRQSSSNVLALIGRGCLAYARHDYLAALGFFKSVLMHQPR 185

Query: 195 CPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDL-QANEAAGIRKG 253
            PG +R+ I  C  K+G++  AR+ F+ AL+ +  +  AL+ +A++ L Q N+   + + 
Sbjct: 186 GPGDVRVAIAHCFLKMGEMDSARRCFELALENNGRSQNALLGMALLKLNQCNKDTHV-EA 244

Query: 254 MEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLAR 313
           +  +  AFE+     + L  LA+H+++ G H  V  L   A  +T+    +S +   +AR
Sbjct: 245 INLLCAAFELNHRHPVVLGILASHYYYAGDHEQVWSLAGNAYLLTDIPQLQSENCLLIAR 304

Query: 314 SYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYP 373
           S+H+   ++KA  +Y  SVK    P  ++    GL Q+ L+ G+   A    E +L++ P
Sbjct: 305 SFHATRQFDKAKEFYALSVKLA--PEGYVLSQLGLAQMYLRRGERNEAKGCLETLLKVLP 362

Query: 374 DNCETLKALGHIYV---QLGQIEKAQELLRKA--AKIDPRDAQAFIDLGELLISSDT-GA 427
                L  L  IY+     GQ+++A E+L K   + +  +D   ++ L          G 
Sbjct: 363 KEHTGLVLLSKIYLAERAAGQVDQAVEMLGKVVESPLGRQDCNCWLALAFGYEHKGLWGQ 422

Query: 428 ALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSK 487
           A+D+++ A  + +K+G EVP+E +NN+          + A  +  +AL            
Sbjct: 423 AIDSYQKAMAICEKSGREVPVEWVNNLAATQQLAKMPQQALATIDEALA----------- 471

Query: 488 TKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVL 547
                                 R +  G+      N +T+ FN  R+LE +H    A + 
Sbjct: 472 ----------------------RSDRAGDE-HRQTNLLTLRFNRCRILEDLHRCDLAEIA 508

Query: 548 YRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKND 607
           Y++IL +Y  Y D YLRL A+A  +N + ++ E   + LKV+ +   A S LG   LK  
Sbjct: 509 YKVILDEYPSYYDCYLRLGAMALRQNKMSIATEYFKDVLKVDNENLPARSYLGSCYLKLG 568

Query: 608 DWVKAKETFRAASDATDGKDSYATLSLGN---WNYFAALRNEKRAPKLEATHLEKAKELY 664
              +A   F         +DSY  +++GN    +    L N  R       HLEKA + +
Sbjct: 569 LASQAMYNFSVI------QDSYGLVAMGNVCLHDLRKCLDNGDRY--YAKKHLEKALQFF 620

Query: 665 TRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVY 724
            + +  +  NL+A+NG GV L+ +     ++  F Q+ EA       + P   +N AH  
Sbjct: 621 KKALEHNPRNLWASNGIGVALSGREFSSEAEATFQQIVEAGR-----ECPPAILNFAHTA 675

Query: 725 FAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNY 784
            A+G +  A + Y+ CL +F  +   + ++ LA++ Y   + ++ K  LL+A H+AP N 
Sbjct: 676 LAKGQYKQASQTYKQCLEEFLPHNCVETIVPLAKSLYMEGKAREAKMWLLKARHVAPENP 735

Query: 785 TLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAA 832
            + ++ G+A++  S    Q  R    E+     EL+ +   F +LS +
Sbjct: 736 VVMYNLGLAIKSDSELIFQAPRPELTELVRAELELKVSYSYFDYLSTS 783


>gi|194884950|ref|XP_001976359.1| GG22832 [Drosophila erecta]
 gi|190659546|gb|EDV56759.1| GG22832 [Drosophila erecta]
          Length = 910

 Score =  235 bits (599), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 199/731 (27%), Positives = 339/731 (46%), Gaps = 57/731 (7%)

Query: 112 LATQYYNKASRIDMHEPSTW-VGKGQL-LLAKGEVEQASSAFKIVLEADRDNVPALLGQA 169
           +A  Y+++   +   E +   V KG L +L+    + A + F  VL+    N+ AL+G+A
Sbjct: 73  MAINYFDQLDSLGEQEDAHLQVTKGYLWMLSSSRAQDADALFIRVLQKQPRNILALVGRA 132

Query: 170 CVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPE 229
           C+ +N   Y+ +L ++K  L V P     +R+GIG C   +G+L KAR +FQ AL+ + +
Sbjct: 133 CLAYNHQDYTGALGYFKSVLIVQPQGLVDVRVGIGHCFRMMGELEKARVSFQAALEYNAQ 192

Query: 230 NVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQ 289
              A + LA++ L         +G + +  AF+   +    L+ LA+  +  G H +V  
Sbjct: 193 CQNAFLGLALLKLNQRGEDSYLEGKKLLVAAFDQNKHNPDVLSILASLSYLEGNHEMVRD 252

Query: 290 LTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLG 349
           L   +L  T++   +S +Y  +A+SYH+ G  E A  YY+ SVK    P  ++ PY G+ 
Sbjct: 253 LAGNSLRSTDNKQIESQNYLQIAKSYHATGQLEAAKKYYVLSVKV--APEGYVLPYVGMA 310

Query: 350 QVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQ---LGQIEKAQELLRKAAKID 406
           Q+ L  G+   A    E  L+  P+     + L +IY++    GQI+KA E+L K  +  
Sbjct: 311 QMYLNEGEINRAKACLEAFLKHEPEEPLVWRLLANIYLEERSPGQIDKAIEMLVKVVE-S 369

Query: 407 PRDAQAFIDLGELLISSDT----GAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKG 462
               +AF     L  + +       A++A++ A ++    G  +PIE LNN+        
Sbjct: 370 ASCREAFHSWLSLAFAYEQKRLWAQAVNAYQKAISIYSGEGHHIPIEWLNNLANSQLMAK 429

Query: 463 EFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPW 522
             E A  +  DAL          SK +T                       +G H     
Sbjct: 430 MPEQALDTLDDAL----------SKCRTL----------------------NGEHKTT-- 455

Query: 523 NKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELV 582
           N +++ +N   +LE++H    A   Y+ IL  Y  Y D YLRL  +A  +N L  +IE  
Sbjct: 456 NLLSLHYNRGLVLEELHRFDLAVENYKSILKSYPTYYDCYLRLGVMAMQKNELTQAIEYF 515

Query: 583 NEALKVNGKYPNALSMLGDL--ELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYF 640
            + L  +     A + +GD    L  D +         AS  ++ KD+Y ++++GN+   
Sbjct: 516 KDVLNEDNSSLAARAYMGDCFNRLSLDKYATFNYNMILASQ-SNVKDTYVSMAMGNF-CL 573

Query: 641 AALRNEKRAPKLEATHLEKAKELY--TRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLF 698
             L++        A   ++ K LY    V+  +  NL+AANG G VL+          +F
Sbjct: 574 KKLQSWMAGGNFGAARRQQGKALYFFGMVLDGNPRNLWAANGIGAVLSSYKNLSAGAAIF 633

Query: 699 TQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLAR 758
            Q+ E+ +      +P + +N AH+   +G + LA++ Y+ CL++F       ++ YLA+
Sbjct: 634 KQIIESGNKC----LPAI-LNSAHIALERGQYRLAIQTYERCLKEFLPKNCVAVMHYLAK 688

Query: 759 THYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAE 818
             Y+    +  KK LL+   L P +  + F+  + ++K +   L   R   DE++S   +
Sbjct: 689 ALYDEGDTRQAKKWLLKIRLLVPQDPFVLFNLALTIKKEADQALALPRPQLDELKSIQDQ 748

Query: 819 LENAVRVFSHL 829
           L  A   F HL
Sbjct: 749 LNVAYNFFYHL 759


>gi|195057475|ref|XP_001995265.1| GH22725 [Drosophila grimshawi]
 gi|193899471|gb|EDV98337.1| GH22725 [Drosophila grimshawi]
          Length = 1238

 Score =  232 bits (592), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 180/676 (26%), Positives = 325/676 (48%), Gaps = 53/676 (7%)

Query: 137 LLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCP 196
           L+L +  +++AS+ F   L      V ALLG AC+ ++RG Y  +L ++K  L   P   
Sbjct: 44  LILIELRLDEASNHFVTALRQVPHCVQALLGLACLAYSRGEYKMALGYFKSVLLHRPQGS 103

Query: 197 GA-IRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGME 255
            A +R+GI  C  +LG L +AR+AF+ AL+ +  ++ AL+ +A + L   +    ++G+ 
Sbjct: 104 MADVRVGIAHCFVQLGDLDRARRAFELALEHNGHSINALIGIAQLKLNQRQPNSTKEGVN 163

Query: 256 KMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSY 315
            ++ AFE  P+  + L +L+ H ++ G +  ++ L   A  +T+    +S   + LAR +
Sbjct: 164 LLREAFEQNPHHPLVLTWLSAHCYYEGNYEKLQLLAGNAYRITDDPLIQSQDCFQLARCF 223

Query: 316 HSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDN 375
           H+  +Y+ A  +Y  S+ E   PH +    +G+ Q+ ++ GD        + VL   P  
Sbjct: 224 HAMKNYDLAFNFYGKSLNEY--PHSYAPTEFGIAQIYVRRGDLVRGEELLKSVLNKLPQQ 281

Query: 376 CETLKALGHIYVQLGQIEKAQELLRKAAKIDP-RDAQAFIDLGELLISSDTG-AALDAFK 433
            + L+ L   Y Q G+ E A EL+  A    P  D   ++ L ++         +L A++
Sbjct: 282 PQALRMLATFYSQSGKFEAAVELINIALMHSPTNDYDIWLGLADIYERKQLWQQSLHAYE 341

Query: 434 TARTL---LKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKT 490
            A+ +   L ++  +VP+   NNI  + F   + + A Q+                    
Sbjct: 342 KAKYIYQGLSESPRDVPLTWRNNIAALQFYANQSKEALQTL------------------- 382

Query: 491 YVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRL 550
                +A M   +D            H E   N +T+ FN AR+LE++     A  +Y+ 
Sbjct: 383 -----NAVMPVTQD-----------EHCES--NMLTLKFNRARILEELRQDEQAENIYKQ 424

Query: 551 ILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWV 610
           ++ +Y +Y D+YLRL A+A  RN +  ++E  N  L+ +     A  +LG    K    +
Sbjct: 425 LMREYPNYTDSYLRLGAMAYKRNKIDTALEFFNAVLQRDEHNKAARKLLGICYCKQGSVL 484

Query: 611 KAKETFRAASDATDGK-DSYATLSLGNWNYFAALRNEKRA-PKLEATHLEKAKELYTRVI 668
            A   + A       + DS   +S GN     A  +  R  P+    ++E A +L+ + +
Sbjct: 485 HALNHYNAIRRQPQHQHDSEILVSQGNVLLIQAQEDIARGQPEESRRNVENALQLFRKAL 544

Query: 669 VQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQG 728
            Q+  NL+A NG  V L   G     + +F  +   ++     +  D  +N+AH+   Q 
Sbjct: 545 EQNQCNLWATNGIAVSLTLNGHLADGEKMFELIVNTSN-----RCTDAILNIAHIALEQQ 599

Query: 729 NFALAMKMYQNCLRKFYYNTD-AQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLR 787
            +A A++MY+  L++     +  Q++ YLAR+ Y+  ++++ +  L+RA H+AP N TL 
Sbjct: 600 QYAKAIEMYRKYLQEDLLPVNKVQVMQYLARSLYQGGRFEEARDVLIRARHVAPQNRTLL 659

Query: 788 FDAGVAMQKFSASTLQ 803
           ++  VAM++ S S  +
Sbjct: 660 YNLAVAMKQHSQSVFE 675


>gi|195124165|ref|XP_002006564.1| GI18511 [Drosophila mojavensis]
 gi|193911632|gb|EDW10499.1| GI18511 [Drosophila mojavensis]
          Length = 1455

 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 203/826 (24%), Positives = 391/826 (47%), Gaps = 70/826 (8%)

Query: 25  DASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQILEEGSSPEIDEY--YADVRYER 82
           +A + L++L + +A L  W+  A  ++ Q +++ F  +LE   +  +  Y  Y +     
Sbjct: 3   NADEALEMLTSRRAKLRDWIQRAWTHYNQNQIDGFVLLLENSITRGLRGYPGYEEDLLRT 62

Query: 83  IAILNALGVYYTYLGKIETKQREKE-EHFILATQYYNKASRIDMHEPSTWVGKG-QLLLA 140
            A+L A   +Y  +   E  QR  + +  +L       A  ++ +E    + +G  LLL 
Sbjct: 63  HAMLTA---HYFRMACNEVGQRSCDWQEKVLDQLQIIDAMNMESNEIPYLLCRGFALLLV 119

Query: 141 KGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIR 200
            G + +A + F   L     NVPALLG  C+ +NR  Y  +L ++K  L  HP  P  +R
Sbjct: 120 DGCLPEAETLFVSALRQSPYNVPALLGLGCLAYNRQEYRAALGYFKSVLSHHPDGPADVR 179

Query: 201 LGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRA 260
           +GIG C  K+G L +AR+AF+ A++ +   + AL+  A + L   +        + +   
Sbjct: 180 MGIGHCFLKMGDLDRARRAFELAVESNERCINALIGFAQLKLNERQREANMDATKLLCTV 239

Query: 261 FEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGD 320
           FE+     + L +L+ H ++T  +  +      A  +T+    K+ + Y++ARS+H+  D
Sbjct: 240 FELNNRHPVVLTWLSCHLYYTRNYEKLRTAAGNAFLITDDPDLKAQNCYHIARSFHATKD 299

Query: 321 YEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLK 380
           Y++A  +Y  +VK   +P+ F  P+ G+ Q+ ++ G    A  +   +L++ P+N E L+
Sbjct: 300 YDRAFDFYGKAVK--YQPN-FSPPHLGVAQIYVRRGQLYLAELSLRTLLKLMPENKEALR 356

Query: 381 ALGHIYVQLGQ---IEKAQELLRKAAKIDPR-DAQAFIDLGELLISSDT-GAALDAFKTA 435
            LG IY Q  +   +++A +L + A     R D   ++ LGE          A+DA++ A
Sbjct: 357 MLGAIYTQSAEPTKLDRAVQLFQSALDHGGREDCDTWLALGEAYERKQQWQPAIDAYEEA 416

Query: 436 RTLLKKA---GEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYV 492
            ++ ++     +++P+  LNN+  +    G  E+A             L  LD   +   
Sbjct: 417 ISIYQRTHGQDKDIPLPWLNNLAALQQHAGLPEAA-------------LITLDKAIRELP 463

Query: 493 IDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLIL 552
            + ++                   H E   N +TV FN AR+LE +   + A   Y+ ++
Sbjct: 464 KNPNSE------------------HSE--SNLLTVRFNRARVLEDLGLVIQAENSYKQLI 503

Query: 553 FKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKA 612
            +Y +Y D+YLRL  +A   N   +++   +  L++   +  A + LG+L  ++    +A
Sbjct: 504 IEYPNYYDSYLRLGVMANKCNKAVMAVHYFSAVLRLEADHIVARTFLGNLYARHGALSQA 563

Query: 613 KETF-----RAASDATDGKDSYATLSLGNWNYFAALR---NEKRAPKLEATHLEKAKELY 664
             ++     R A+ A     S   +++GN       R   N++    L+  + + A +L+
Sbjct: 564 MCSYSLIMRRQANAAV----SSTLVAVGNVCLLKGTRATANDETDMALQ--YKQNALQLF 617

Query: 665 TRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVY 724
            + + Q+  NL+AANG GV +        ++ ++ QV E++S        +  +NLAHV 
Sbjct: 618 CKALEQNKRNLWAANGLGVAMCHLSHLTAAETIYKQVVESSS-----LCSNAILNLAHVA 672

Query: 725 FAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNY 784
               +++ ++++Y+ CL+        + +  +A   Y++EQ+ + K  L +A   AP + 
Sbjct: 673 MDLKHYSDSVEIYRKCLKDVLPANSVKEMQMIASALYQSEQFDEAKLILCQARRAAPHDP 732

Query: 785 TLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLS 830
            + F+ G+ +++   ST    +    E++     +  A+R F +LS
Sbjct: 733 NIIFNLGLVIKQAIRSTFDTIQTDLTELQKAEQNISIALRFFQYLS 778


>gi|298705742|emb|CBJ49050.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 1233

 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 116/293 (39%), Positives = 175/293 (59%), Gaps = 14/293 (4%)

Query: 2   ACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQ 61
            C+ IPV+ +++ V V  ++LP D +D++D+LKAE APLD+WL  A EY++QG  E FR 
Sbjct: 14  GCIRIPVRGAQQTVEVYTEELPSDYNDVVDVLKAEIAPLDIWLRFAVEYYRQGSEEHFRG 73

Query: 62  ILEE---GSSPEIDEYYADVR----YERIAILNALGVYYTYLGKIETKQREKEEHFILAT 114
           IL E     +P+ + +YAD R      RI ILNAL           + +  +++ +  A 
Sbjct: 74  ILNEIIEALTPDTERFYADDRRAFDVGRIRILNALAADSVKQASKCSDRSARDDGYTTAL 133

Query: 115 QYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFN 174
            +   A RID     TWVGKG   L +GE+++A   F+   +  R N PA LG+A V F+
Sbjct: 134 SHLTSADRIDNMSELTWVGKGVFYLCQGELDRAKYFFENARK-QRHNFPATLGEAAVNFH 192

Query: 175 RGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEAL 234
            G Y  +L+ Y  A++V+P C  ++R+G+GLC YKLGQ+ +A+ A  RALQLDP+NV+AL
Sbjct: 193 HGNYKQALDLYSEAIRVNPECSASVRVGLGLCCYKLGQISRAQAAMTRALQLDPQNVQAL 252

Query: 235 VALAVMDLQANEAA---GIRK---GMEKMQRAFEIYPYCAMALNYLANHFFFT 281
           V  A+++L    A     +R+    +  +  A+ +    AM LN+LANH+F+T
Sbjct: 253 VGSAILELSTASAGSQDAVRRTENAINTISMAYHVDAKNAMVLNHLANHYFWT 305



 Score =  209 bits (531), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 119/338 (35%), Positives = 199/338 (58%), Gaps = 19/338 (5%)

Query: 525  VTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNE 584
            V+++FNLA L E+     AA  L++ +L ++  YV++YLRL  +A+    +  + +   +
Sbjct: 700  VSMVFNLALLHEKQGHHEAAQELHKAVLAEHPTYVNSYLRLGIMARDSGQIHEASKWFKQ 759

Query: 585  ALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGK-DSYATLSLGNWNYFAAL 643
            AL+V+G+ PN ++ +G+L ++N +W  A++ F    +    + DSYA LSLGN  YF+ L
Sbjct: 760  ALEVDGENPNIVAYIGNLHMRNSEWGPAQKKFEKILEMPGLRGDSYANLSLGNI-YFSNL 818

Query: 644  RNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQE 703
             +  +  K    HL  A   Y  V+ +  +N ++ANG G+VLAEKG  D +KD+F +V+E
Sbjct: 819  EDRTKYEK----HLLHAANFYHEVLKKDDANAFSANGLGMVLAEKGTLDHAKDVFARVRE 874

Query: 704  AASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEA 763
             ++      + DVWINLAHVY AQ     A+++YQNCL+KF+   D  + +YLA  +++A
Sbjct: 875  VSAEV----LGDVWINLAHVYLAQNKHNEAIRLYQNCLKKFHGGRDPSLHIYLAHAYFDA 930

Query: 764  EQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTR----RTADEVRSTVAEL 819
             Q+ DC + LL+A+H++P+N  L ++  +A + F+ + LQK +    RT  EV + + +L
Sbjct: 931  RQYNDCMRVLLKALHVSPNNLQLWYNLALARETFAVAVLQKEQKGEARTLAEVENAIEDL 990

Query: 820  ENAVRVFSHLSAASNLHLHG-----FDEKKINTHVEYC 852
            + A ++FS L         G     +D  K   H ++C
Sbjct: 991  KGATKLFSWLKDCKPDKTGGVRHLPYDASKAEKHAKFC 1028



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 53/215 (24%), Positives = 87/215 (40%), Gaps = 19/215 (8%)

Query: 279 FFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKP 338
            FT  +  V +L  TA   T+    K+ S Y  AR +H+ G+  +A L Y  +       
Sbjct: 374 LFTKDYRKVVELASTAYENTSAPEIKAESCYLKARVHHATGNLSEAKLLYNEACHLWP-- 431

Query: 339 HEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQEL 398
            +F    YG+ Q+ +  G    A+     VL   PDN E L  LG +  +      A   
Sbjct: 432 -QFPLAQYGMAQMLVNEGSIDPAMKALNAVLAEVPDNQEALVLLGVLCAKNKDRLPALSK 490

Query: 399 LRKAAKIDPRDAQAFIDLGELL----------ISS------DTGAALDAFKTARTLLKKA 442
            ++A +++PR + A+I   ++L          +SS      D GA          L  ++
Sbjct: 491 FKRALELNPRLSDAWIAQAQVLQEDPADHKLALSSYLKGLGDGGATSTGTTFPEGLSDRS 550

Query: 443 GEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGD 477
           G +       NI V+H   G    A  +++ A  +
Sbjct: 551 GSQTRQAAWTNIAVLHEHIGNAADAMTAYRHAFSE 585



 Score = 45.4 bits (106), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 29/121 (23%), Positives = 63/121 (52%), Gaps = 7/121 (5%)

Query: 315 YHSKGDYEKAGLYYMASVKEINKPHEFIFP-YYGLGQVQLKLGDFRSALTNFEKVLEIYP 373
           Y  +G+ ++A  ++  + K+ +      FP   G   V    G+++ AL  + + + + P
Sbjct: 157 YLCQGELDRAKYFFENARKQRHN-----FPATLGEAAVNFHHGNYKQALDLYSEAIRVNP 211

Query: 374 DNCETLK-ALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAF 432
           +   +++  LG    +LGQI +AQ  + +A ++DP++ QA +    L +S+ +  + DA 
Sbjct: 212 ECSASVRVGLGLCCYKLGQISRAQAAMTRALQLDPQNVQALVGSAILELSTASAGSQDAV 271

Query: 433 K 433
           +
Sbjct: 272 R 272


>gi|40216175|gb|AAR82829.1| AT20558p [Drosophila melanogaster]
          Length = 876

 Score =  221 bits (563), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 211/853 (24%), Positives = 383/853 (44%), Gaps = 72/853 (8%)

Query: 47  AREYFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREK 106
           A E++  GK   F+ I+E+G +  +  Y     Y+R  +  A  +  TYL     K  + 
Sbjct: 12  AMEFYAIGKGADFKAIIEKGIASCMTTYST---YDR-ELYKAYALLATYLSNHAFKIIKS 67

Query: 107 EEHF-ILATQYYNKASRI-DMHEPSTWVGKGQL-LLAKGEVEQASSAFKIVLEADRDNVP 163
              F  +A   +++   +   H+P   V KG L +L+    + A +    VL     N+ 
Sbjct: 68  RPAFQAMAINCFDQLDSLRQQHDPHLQVTKGFLWMLSSSRAQDADALLISVLRNHPKNIL 127

Query: 164 ALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRA 223
           AL+G+AC+ +NR  Y  +L ++K  L + P     + +GIG C +K+G+L KA+ +FQ A
Sbjct: 128 ALIGRACLAYNRQDYIGALGYFKSVLLIQPQGMADVWVGIGHCFWKMGELEKAQLSFQIA 187

Query: 224 LQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQ 283
           L+ + + + A +ALA++  + N+    + G   +  A++        L+ LA  ++  G 
Sbjct: 188 LEHNGQCLNAALALALVKFEHNDEQSYQDGKMLLTAAYKENNKNPDLLSILAGMYYADGN 247

Query: 284 HFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIF 343
           H LV      A+  T +   +S +Y+ +A+SYH+ G +E A  YY+ S K  + P  +I 
Sbjct: 248 HKLVWSFAGNAIKFTANKHIESRNYFQIAKSYHATGQFESAKKYYLLSAK--SAPEGYIL 305

Query: 344 PYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLG---QIEKAQELLR 400
           P  G+ Q+ L  G+   +    E  L   P+    +  L  IY++     +I+KA E+L 
Sbjct: 306 PLVGVAQMYLHEGELNRSKAFLESFLTSEPNEPVVMDLLAKIYLEYKCPEKIDKAIEMLV 365

Query: 401 KAAKIDP--RDAQAFIDLGELLISSDTGA-ALDAFKTARTLLKKAGEEVPIEVLNNIGVI 457
           K  +     ++  ++++L          A  ++A++ A  +    G ++PIE LNN+   
Sbjct: 366 KVVESASYHQNTNSWLNLAFAYEQKRLWAHGVNAYQKAIDIYLSQGHQIPIEWLNNLASS 425

Query: 458 HFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNH 517
                  E A  +  DAL       +++S  KT                           
Sbjct: 426 QLMAKMPEKALNTLDDALSK---CRVMNSDNKTT-------------------------- 456

Query: 518 VELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQL 577
                N +++ +N   +LE++H    A+  Y+ I  +Y  Y D YLRL  +A  +NN   
Sbjct: 457 -----NLLSLQYNRGLVLEELHMFTLAAENYKSITKEYSSYHDCYLRLGVMAIQKNNHTQ 511

Query: 578 SIELVNEALKVNGKYPNALSMLGDL--ELKNDDWVKAKETFRAASDATDGKDSYATLSLG 635
           +IE + + L  +     A + +GD    L  D +         A   +   ++Y ++++G
Sbjct: 512 AIEHLKDILVEDNLNMTARTYMGDCFKGLSLDKFATFNYNMILARQ-SKFTNTYVSMAMG 570

Query: 636 NW------NYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKG 689
           N+      N+ A   N + A K +    EKA + + +++  +  NL+AANG G VL+   
Sbjct: 571 NFCLEKLQNWIAE-GNFRAARKQQ----EKALQCFGKILDCNPKNLWAANGIGAVLSSCN 625

Query: 690 QFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTD 749
                  +F Q+ E  +  +    P + IN AH+    G + LA++ Y+ CL+       
Sbjct: 626 NLSAGGAIFKQIIECGNKCI----PAI-INSAHIALVSGQYRLAIQTYERCLKDHLPKNR 680

Query: 750 AQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTA 809
             ++  LA+  Y+    +  K  LL+  HL P +  + F+ G+A++K +   L   R   
Sbjct: 681 VDVMHCLAKALYDNGDARKAKMWLLKVRHLVPHDPFVIFNLGLAIKKETEQALALPRPQL 740

Query: 810 DEVRSTVAELENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAERE 869
           DE+      L+ A ++F H+    NL+      +    + E C++L+    + +  A   
Sbjct: 741 DELMGLDGLLKVAFKLFCHI----NLNHPKISVRVSAKYAEDCQNLMTELIVKKRQASES 796

Query: 870 EQQNRQRQEAARQ 882
                 R +  +Q
Sbjct: 797 HAMEEDRVQLQKQ 809


>gi|74149130|dbj|BAE22373.1| unnamed protein product [Mus musculus]
          Length = 445

 Score =  221 bits (562), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 135/371 (36%), Positives = 213/371 (57%), Gaps = 18/371 (4%)

Query: 544 ASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLE 603
           A  LY+ IL ++ +YVD YLRL A+A+ + N   + +   EAL++N  +P+A S++G+L 
Sbjct: 6   AEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLH 65

Query: 604 LKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKE 662
           L   +W   ++ F R         D+Y+ L+LGN  +   L    R  + E  H ++A  
Sbjct: 66  LAKQEWGPGQKKFERILKQPATQSDTYSMLALGN-VWLQTLHQPTRDREKEKRHQDRALA 124

Query: 663 LYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAH 722
           +Y +V+     NLYAANG G VLA KG F  ++D+F QV+EA +      + DVW+NLAH
Sbjct: 125 IYKQVLRNDAKNLYAANGIGAVLAHKGYFREARDVFAQVREATAD-----ISDVWLNLAH 179

Query: 723 VYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPS 782
           +Y  Q  +  A++MY+NCLRKFY + + +I+LYLAR  ++  + Q+CK++LL+A H+APS
Sbjct: 180 IYVEQKQYISAVQMYENCLRKFYKHQNTEIVLYLARALFKCGKLQECKQTLLKARHVAPS 239

Query: 783 NYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGFDE 842
           +  L F+  + +Q+ + S L+  +    EV + V ELE A R FS+LS   +     FD 
Sbjct: 240 DTVLMFNVALVLQRLATSVLKDEKSNLKEVLNAVKELELAHRYFSYLSKVGD--KMRFDL 297

Query: 843 KKINTHVEYCKHLLDAAKIHREAAEREEQQNR-------QRQEAARQAALAEE--ARRKA 893
               +    C  LL  A+ H   A +++++ R       Q +E  RQ  L E+   R + 
Sbjct: 298 ALAASEARQCSDLLSQAQYHVARARKQDEEERELRAKQEQEKELLRQKLLKEQEEKRLRE 357

Query: 894 EEQKKYLLEKR 904
           +E++K LLE+R
Sbjct: 358 KEEQKKLLEQR 368


>gi|24659141|ref|NP_611764.1| CG9899 [Drosophila melanogaster]
 gi|21626595|gb|AAF46964.2| CG9899 [Drosophila melanogaster]
          Length = 922

 Score =  221 bits (562), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 204/801 (25%), Positives = 366/801 (45%), Gaps = 68/801 (8%)

Query: 47  AREYFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREK 106
           A E++  GK   F+ I+E+G +  +  Y     Y+R  +  A  +  TYL     K  + 
Sbjct: 12  AMEFYAIGKGADFKAIIEKGIASCMTTYST---YDR-ELYKAYALLATYLSNHAFKIIKS 67

Query: 107 EEHF-ILATQYYNKASRI-DMHEPSTWVGKGQL-LLAKGEVEQASSAFKIVLEADRDNVP 163
              F  +A   +++   +   H+P   V KG L +L+    + A +    VL     N+ 
Sbjct: 68  RPAFQAMAINCFDQLDSLRQQHDPHLQVTKGFLWMLSSSRAQDADALLISVLRNHPKNIL 127

Query: 164 ALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRA 223
           AL+G+AC+ +NR  Y  +L ++K  L + P     + +GIG C +K+G+L KA+ +FQ A
Sbjct: 128 ALIGRACLAYNRQDYIGALGYFKSVLLIQPQGMADVWVGIGHCFWKMGELEKAQLSFQIA 187

Query: 224 LQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQ 283
           L+ + + + A +ALA++  + N+    + G   +  A++        L+ LA  ++  G 
Sbjct: 188 LEHNGQCLNAALALALVKFEHNDEQSYQDGKMLLTAAYKENNKNPDLLSILAGMYYADGN 247

Query: 284 HFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIF 343
           H LV      A+  T +   +S +Y+ +A+SYH+ G +E A  YY+ S K  + P  +I 
Sbjct: 248 HKLVWSFAGNAIKFTANKHIESRNYFQIAKSYHATGQFESAKKYYLLSAK--SAPDGYIL 305

Query: 344 PYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLG---QIEKAQELLR 400
           P  G+ Q+ L  G+   +    E  L   PD    +  L  IY++     +I+KA E+L 
Sbjct: 306 PLVGVAQMYLHEGELNRSKAFLESFLTSEPDEPVVMDLLAKIYLEYKCPEKIDKAIEMLV 365

Query: 401 KAAKIDP--RDAQAFIDLGELLISSDTGA-ALDAFKTARTLLKKAGEEVPIEVLNNIGVI 457
           K  +     ++  ++++L          A  ++A++ A  +    G ++PIE LNN+   
Sbjct: 366 KVVESASYHQNTNSWLNLAFAYEQKRLWAHGVNAYQKAIDIYLSQGHQIPIEWLNNLASS 425

Query: 458 HFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNH 517
                  E A  +  DAL       +++S  KT                           
Sbjct: 426 QLMAKMPEKALNTLDDALSK---CRVMNSDNKTT-------------------------- 456

Query: 518 VELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQL 577
                N +++ +N   +LE++H    A+  Y+ I  +Y  Y D YLRL  +A  +NN   
Sbjct: 457 -----NLLSLQYNRGLVLEELHMFTLAAENYKSITKEYSSYHDCYLRLGVMAIQKNNHTQ 511

Query: 578 SIELVNEALKVNGKYPNALSMLGDL--ELKNDDWVKAKETFRAASDATDGKDSYATLSLG 635
           +IE + + L  +     A + +GD    L  D +         A   +   ++Y ++++G
Sbjct: 512 AIEHLKDILVEDNLNMTARTYMGDCFKGLSLDKFATFNYNMILARQ-SKFTNTYVSMAMG 570

Query: 636 NW------NYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKG 689
           N+      N+ A   N + A K +    EKA + + +++  +  NL+AANG G VL+   
Sbjct: 571 NFCLEKLQNWIAE-GNFRAARKQQ----EKALQCFGKILDCNPKNLWAANGIGAVLSSCN 625

Query: 690 QFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTD 749
                  +F Q+ E  +  +    P + IN AH+    G + LA++ Y+ CL+       
Sbjct: 626 NLSAGGAIFKQIIECGNKCI----PAI-INSAHIALVSGQYRLAIQTYERCLKDHLPKNR 680

Query: 750 AQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTA 809
             ++  LA+  Y+    +  K  LL+  HL P +  + F+ G+A++K +   L   R   
Sbjct: 681 VDVMHCLAKALYDNGDARKAKMWLLKVRHLVPHDPFVIFNLGLAIKKETEQALALPRPQL 740

Query: 810 DEVRSTVAELENAVRVFSHLS 830
           DE+      L+ A ++F H++
Sbjct: 741 DELMGLDGLLKVAFKLFCHIN 761


>gi|384080883|dbj|BAM11104.1| Paf1/RNA polymerase II complex component, homolog, partial
           [Siebenrockiella crassicollis]
          Length = 326

 Score =  220 bits (560), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 122/306 (39%), Positives = 184/306 (60%), Gaps = 3/306 (0%)

Query: 82  RIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAK 141
           ++  L+ L  YY    + E  +  K+E    AT  Y  A +I M++ +  +G+    L +
Sbjct: 1   QMTCLDTLAAYYVQQARKEKNKDNKKELITQATLLYTMADKIIMYDQNHLLGRACFCLLE 60

Query: 142 GE-VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIR 200
           G+ ++QA + F  VL    +N+PALLG+AC+ FN+  Y  +L +YK+AL+ +P CP  +R
Sbjct: 61  GDKMDQADAQFHFVLNQSPNNIPALLGKACISFNKKDYRGALAYYKKALRTNPGCPAEVR 120

Query: 201 LGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRA 260
           LG+G C  KL +L KAR AF RAL+L+ + V ALV LAV++L   EA  I+ G++ + RA
Sbjct: 121 LGMGHCFVKLNKLEKARLAFSRALELNSKCVGALVGLAVLELNNKEADSIKNGVQLLSRA 180

Query: 261 FEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGD 320
           + I P   M LN+LANHFFF   +  V+ L   A   T     ++ S Y LARS+H + D
Sbjct: 181 YTIDPSNPMVLNHLANHFFFKKDYGKVQHLALHAFHNTEVEAMQAESCYQLARSFHVQED 240

Query: 321 YEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLK 380
           Y++A  YY  + +  +    F+ P++GLGQ+ +  GD  +A   FEKVL+ YP+N ET+K
Sbjct: 241 YDQAFQYYYQATQFASS--SFVLPFFGLGQMYIYRGDKENASQCFEKVLKAYPNNYETMK 298

Query: 381 ALGHIY 386
            LG +Y
Sbjct: 299 ILGSLY 304


>gi|195346992|ref|XP_002040038.1| GM15990 [Drosophila sechellia]
 gi|194135387|gb|EDW56903.1| GM15990 [Drosophila sechellia]
          Length = 913

 Score =  210 bits (534), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 207/833 (24%), Positives = 367/833 (44%), Gaps = 83/833 (9%)

Query: 47  AREYFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREK 106
           A +++  GK   F+ ILE+G +  I +Y     YE+  +  A  +  TYL     +  + 
Sbjct: 12  AMQFYAIGKGADFKAILEKGIATCIAQYST---YEQ-ELYKAYSLLATYLSNHAFRVVKS 67

Query: 107 EEHF-ILATQYYNKASRIDMHE-PSTWVGKGQL-LLAKGEVEQASSAFKIVLEADRDNVP 163
              F  +A    ++   +   E P   V KG L +L+    + A + F  VL     N+ 
Sbjct: 68  RPAFQAMAINCIDQLDSLRQPEDPHLQVTKGFLWMLSSSRAQDADALFISVLRKQPKNIL 127

Query: 164 ALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRA 223
           AL+G+AC+ +NR  Y  +L ++K  L +       + +GIG C +K+G+  KAR +FQ A
Sbjct: 128 ALIGRACLAYNRQDYIGALGYFKSVLLIQSKGMADVWVGIGHCFWKMGERKKARVSFQIA 187

Query: 224 LQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQ 283
           L+   + + A + LA++    N+    ++G   +  A+         L+ LA  ++  G 
Sbjct: 188 LE-HGQCLNARLGLALIKFDQNDEQSHQEGKMLLAEAYNEDNRNPELLSILAGMYYTDGN 246

Query: 284 HFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIF 343
           H +V      A+  T +   +S +Y+ +A+SYH+   +E A  YY+ + K    P  +I 
Sbjct: 247 HKMVWSFAGNAIKFTANKHIESRNYFQIAKSYHATDQFESAKKYYLLAAKA--APEGYIL 304

Query: 344 PYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQ---LGQIEKAQELLR 400
           P  G+ Q+ L  G+   A    E  L   PD    +  L  IY++      I++A E+L 
Sbjct: 305 PLVGMAQMYLNDGELSKAKGCLESFLMFEPDEPVVMDLLAKIYIEEKCPENIDEAIEMLV 364

Query: 401 KAAKIDP--RDAQAFIDLGELLISSDTGA-ALDAFKTARTLLKKAGEEVPIEVLNNIGVI 457
           K  +     ++  ++++L          A  ++A++ A  +    G ++PIE LNN+   
Sbjct: 365 KVVESASYRQNINSWLNLAFAYEQKRLWAQVVNAYQKAIDIYLSRGHQIPIEWLNNLANS 424

Query: 458 HFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNH 517
                  E A  +  +AL       +L+S+ KT                           
Sbjct: 425 QLMAKMPERALDTLDEALSK---CRVLNSEHKTT-------------------------- 455

Query: 518 VELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQL 577
                N +++ +N   +LE++H    A   Y  I  +Y  Y D YLRLA I+   N    
Sbjct: 456 -----NLLSLQYNRGLVLEELHMFTQAVDNYIAITKEYPSYHDCYLRLAVISIQMNKHTQ 510

Query: 578 SIELVNEALKVNGKYPNALSMLGDL--ELKNDDWVKAKETFRAASDATDGKDSYATLSLG 635
           +IE + + L  +     A + +GD    L  D +         A   ++  ++YA++++G
Sbjct: 511 AIEHLKDILVEDNLNMTARTYMGDCFKGLSLDKFATFNYNMILAR-PSNFTNTYASMAMG 569

Query: 636 NW------NY-----FAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVV 684
           N+      N+     F A R +K          EKA + + +V+  +  NL+AANG G V
Sbjct: 570 NFCLEKLQNWLAEGNFRAARKQK----------EKALQCFAKVLDCNPKNLWAANGIGAV 619

Query: 685 LAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKF 744
           L+   +      +F Q+ E  +  +    P + IN AH+    G + LA++ Y+ CL+  
Sbjct: 620 LSSCYKLSAGGAIFQQITEGGNKCI----PAI-INSAHIALVSGQYRLAIQTYERCLKNH 674

Query: 745 YYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQK 804
                  ++ YLA+  Y     +  K  LL+  HL P +  + F+ G+ ++K +   L  
Sbjct: 675 LPKNSVDVMHYLAKALYNNGDTRMAKMWLLKVRHLVPQDPHVIFNLGLVIKKEAEDVLAL 734

Query: 805 TRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLD 857
            R   DE+      L+ A  +F H+    NL+      +    + E C++L++
Sbjct: 735 PRPQLDELMGLDGMLKMAFNLFHHV----NLNHPKISVRLSAMYAEDCQNLIN 783


>gi|349605498|gb|AEQ00714.1| RNA polymerase-associated protein CTR9-like protein-like protein,
           partial [Equus caballus]
          Length = 364

 Score =  209 bits (533), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 128/353 (36%), Positives = 203/353 (57%), Gaps = 18/353 (5%)

Query: 562 YLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAAS 620
           YLRLAA+A+ + N   + +   EAL++N  +P+A S++G+L L   +W   ++ F R   
Sbjct: 1   YLRLAAMARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILK 60

Query: 621 DATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANG 680
             +   D+Y+ L+LGN  +   L    R  + E  H ++A  +Y +V+     NLYAANG
Sbjct: 61  QPSTQSDTYSMLALGN-VWLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDAKNLYAANG 119

Query: 681 AGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNC 740
            G VLA KG F  ++D+F QV+EA +      + DVW+NLAH+Y  Q  +  A++MY+NC
Sbjct: 120 IGAVLAHKGYFREARDVFAQVREATAD-----ISDVWLNLAHIYVEQKQYISAVQMYENC 174

Query: 741 LRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSAS 800
           LRKFY + + +++LYLAR  ++  + Q+CK++LL+A H+APS+  L F+  + +Q+ + S
Sbjct: 175 LRKFYKHQNTEVVLYLARALFKCGKLQECKQTLLKARHVAPSDTVLMFNVALVLQRLATS 234

Query: 801 TLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAK 860
            L+  +    EV + V ELE A R FS+LS   +     FD     T    C  LL  A+
Sbjct: 235 VLKDEKSNLKEVLNAVKELELAHRYFSYLSKVGD--KMRFDLALAATEARQCSDLLSQAQ 292

Query: 861 IHREAAEREEQQNR-------QRQEAARQAALAEE--ARRKAEEQKKYLLEKR 904
            H   A +++++ R       Q +E  RQ  L E+   R + +E++K LLE+R
Sbjct: 293 YHVARARKQDEEERELRAKQEQEKELLRQKLLKEQEEKRLREKEEQKKLLEQR 345


>gi|195585946|ref|XP_002082739.1| GD11743 [Drosophila simulans]
 gi|194194748|gb|EDX08324.1| GD11743 [Drosophila simulans]
          Length = 924

 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 199/806 (24%), Positives = 356/806 (44%), Gaps = 79/806 (9%)

Query: 47  AREYFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREK 106
           A +++  GK   F+ ILE+G +  +  Y     YE+  +  A  +  TYL     +  + 
Sbjct: 12  AMQFYAIGKGADFKAILEKGIATCMAPYST---YEQ-ELYTAYSLLATYLTNHAFRVVKS 67

Query: 107 EEHF-ILATQYYNKASRIDMHE-PSTWVGKGQL-LLAKGEVEQASSAFKIVLEADRDNVP 163
              F  +A   +++   +   E P   V KG L +L+    + A + F  VL     N+ 
Sbjct: 68  RPAFQAMAINCFDQLESLRQQEDPHLQVTKGFLWMLSSSRAQDADALFISVLRKQPKNIL 127

Query: 164 ALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRA 223
           AL+G+AC+ +NR  Y  +L ++K  L +       + +GIG C +K+G+  KAR +F+ A
Sbjct: 128 ALIGRACLAYNRQDYIGALGYFKSVLLIQSKGMADVWVGIGHCFWKMGEREKARVSFKIA 187

Query: 224 LQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQ 283
           L+   + + A + LA+++   N+    ++G   +  A+         L+ LA  ++  G 
Sbjct: 188 LE-HGQCLNATLGLALINFDQNDEQSYQEGKMLLAEAYTEDNRNPELLSILAGMYYTDGN 246

Query: 284 HFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIF 343
           H +V  L   A+  T +   +S +Y+ +A+SYH+   +E A  YY+ + K    P  +I 
Sbjct: 247 HKMVWSLAGNAINFTANKHIESRNYFQIAKSYHATDQFESAKKYYLLAAKA--APEGYIL 304

Query: 344 PYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQ---LGQIEKAQELLR 400
           P  G+ Q+ L  G+   A    E  L   PD    +  L  IY++      I++A E+L 
Sbjct: 305 PLVGMAQMYLNDGELSKAKGCLESFLMFEPDEPVVMDLLAKIYIEEKCTENIDEAIEMLV 364

Query: 401 KAAKIDP--RDAQAFIDLGELLISSDTGA-ALDAFKTARTLLKKAGEEVPIEVLNNIGVI 457
              +     ++  ++++L          A  ++A++ A  +    G ++PIE LNN+   
Sbjct: 365 NVVESASYRQNINSWLNLAFAYEQKRLWAQVVNAYQKAMDIYLSRGHQIPIEWLNNLANS 424

Query: 458 HFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNH 517
                  E A  +  +AL       +L+S+ KT                           
Sbjct: 425 QLMAKMPERALDTLDEALSK---CRVLNSEHKTT-------------------------- 455

Query: 518 VELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQL 577
                N +++ +N   +LE++H    A   Y  I  +Y  Y D YLRLA +A   N    
Sbjct: 456 -----NLLSLQYNRGLVLEELHMFTQAVDNYMAITKEYPSYHDCYLRLAVMAIQMNKHTQ 510

Query: 578 SIELVNEALKVNGKYPNALSMLGDL--ELKNDDWVKAKETFRAASDATDGKDSYATLSLG 635
           +IE + + L  +     A + +GD    L  D +             ++  D+YA++++G
Sbjct: 511 AIEHLKDILVEDNLNMTARTYMGDCFKRLSLDKFATFNYNMILVR-PSNFTDTYASMAMG 569

Query: 636 NW------NY-----FAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVV 684
           N+      N+     F A R +K          EKA + + +V+  +  NL+AANG G V
Sbjct: 570 NFCLEKLQNWLAEGNFRAARKQK----------EKALQCFAKVLDCNPKNLWAANGIGAV 619

Query: 685 LAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKF 744
           L+   +      +F Q+ E  +  +    P + IN AH+    G + LA++ Y+ CL+  
Sbjct: 620 LSSCYKLSAGGAIFQQIIEGGNKCI----PAI-INSAHIALVSGQYRLAIQTYERCLKNH 674

Query: 745 YYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQK 804
                  ++ YLA+  Y     +  K  LL+  HL P +  + F+ G+ ++K +   L  
Sbjct: 675 LPKNSVDVMHYLAKALYNNGDTRMAKMWLLKVRHLVPQDPHVIFNLGLVIKKEAEDALAL 734

Query: 805 TRRTADEVRSTVAELENAVRVFSHLS 830
            R   D++      L+ A  +F H++
Sbjct: 735 PRPQLDDLMGLDGMLKMAFNLFQHVN 760


>gi|444516600|gb|ELV11217.1| RNA polymerase-associated protein CTR9 like protein [Tupaia
           chinensis]
          Length = 978

 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 153/473 (32%), Positives = 241/473 (50%), Gaps = 79/473 (16%)

Query: 2   ACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQ 61
             + IP+++++E + +  DQLP +  +++ ILK E   L +W+ +A EY+KQGK E+F +
Sbjct: 4   GSIEIPLRDTDEVIELDFDQLP-EGDEVISILKQEHTQLHIWIALALEYYKQGKTEEFVK 62

Query: 62  ILEEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNK 119
           +LE   +  ID    Y D   +++  L+ L  YY    + E  +  K++    AT  Y  
Sbjct: 63  LLE---AARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNKKDLITQATLLYTM 119

Query: 120 ASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRY 178
           A +I M++ +  +G+    L +G+ ++QA + F  VL    +N+PALL +          
Sbjct: 120 ADKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPALLAE---------- 169

Query: 179 SDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA 238
                               +RLG+G C  KL +L KAR AF RAL+L+ + V ALV LA
Sbjct: 170 --------------------VRLGMGHCFVKLNKLEKARLAFSRALELNSKCVGALVGLA 209

Query: 239 VMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVT 298
           V++L   E         K+Q              +LA H F   +   VE +        
Sbjct: 210 VLELNNKE------DYSKVQ--------------HLALHAFHNTE---VEAM-------- 238

Query: 299 NHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDF 358
                ++ S Y LARS+H + DY++A  YY  + +  +    F+ P++GLGQ+ +  GD 
Sbjct: 239 -----QAESCYQLARSFHVQEDYDQAFQYYYQATQFASS--SFVLPFFGLGQMYIYRGDK 291

Query: 359 RSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKIDPRDAQAFID 415
            +A   FEKVL+ YP+N ET+K LG +Y      EK   A+  L+K  +  P D +A+I+
Sbjct: 292 ENASQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKVTEQYPDDVEAWIE 351

Query: 416 LGELLISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEKGEFESA 467
           L ++L  +D   AL A+ TA R L +K   +VP E+LNN+G +HF  G    A
Sbjct: 352 LAQILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEA 404



 Score =  122 bits (306), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 110/396 (27%), Positives = 181/396 (45%), Gaps = 66/396 (16%)

Query: 530 NLARLLEQIHDTVAASVLYRLILFK--YQDYVDAYLRLAAIAKARNNLQLSIELVNEA-- 585
           +L ++ EQ  D V A +    IL +   Q  + AY     I + +    +  E++N    
Sbjct: 334 HLKKVTEQYPDDVEAWIELAQILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGA 393

Query: 586 -------LKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNW 637
                  L     +P+A S++G+L L   +W   ++ F R     +   D+Y+ L+LGN 
Sbjct: 394 LHFRLGNLGEAKDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQSDTYSMLALGNV 453

Query: 638 NYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDL 697
            +   L    R  + E  H ++A  +Y +V+     NLYAANG G               
Sbjct: 454 -WLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDAKNLYAANGIG--------------- 497

Query: 698 FTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLA 757
                   S   +V                   ++    Y+NCLRKFY + + +++LYLA
Sbjct: 498 --------SYKTYV-------------------SIVPCKYENCLRKFYKHQNTEVVLYLA 530

Query: 758 RTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVA 817
           R  ++  + Q+CK++LL+A H+APS+  L F+  + +Q+ + S L+  +    EV + V 
Sbjct: 531 RALFKCGKLQECKQTLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVLNAVK 590

Query: 818 ELENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNR--- 874
           ELE A R FS+LS   +     FD     T    C  LL  A+ H   A +++++ R   
Sbjct: 591 ELELAHRYFSYLSKVGDKMR--FDLALAATEARQCSDLLSQAQYHVARARKQDEEERELR 648

Query: 875 ----QRQEAARQAALAEE--ARRKAEEQKKYLLEKR 904
               Q +E  RQ  L E+   R + +E++K LLE+R
Sbjct: 649 AKQEQEKELLRQKLLKEQEEKRLREKEEQKKLLEQR 684


>gi|260949913|ref|XP_002619253.1| hypothetical protein CLUG_00412 [Clavispora lusitaniae ATCC 42720]
 gi|238846825|gb|EEQ36289.1| hypothetical protein CLUG_00412 [Clavispora lusitaniae ATCC 42720]
          Length = 1097

 Score =  196 bits (499), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 244/979 (24%), Positives = 442/979 (45%), Gaps = 143/979 (14%)

Query: 17  VALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQILEEGSSPEIDE-YY 75
           V++D+LP DA +++  L+AE+  +  W+++A+ Y ++GK    ++I++      +D+ ++
Sbjct: 52  VSIDELPEDAHELIGFLQAEKCEVKYWVMVAQAYAQEGKAGDAQKIVQAA----LDQAHF 107

Query: 76  ADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKG 135
           +D   +R  + + LG  Y  L    ++  +K ++   A   +   + +D   P     + 
Sbjct: 108 SDS--DRDLVRSVLGWVYLALA---SEGTDKSDNLARAAAEF---ANLDDSSPQVLSARA 159

Query: 136 QLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGR-YSDSLEFYKRALQVHPS 194
            + L +   +QA  AF  +L+AD  N  AL+G+A +  ++ + Y+ +L+ Y++ L + P 
Sbjct: 160 VMHLHEDHADQALQAFDKLLKADPANCFALMGKAQITLSKTQNYTSALKLYQQVLVLDPL 219

Query: 195 CPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEA--LVALAVMDLQANEAAGIRK 252
                RLGIGLC + L     A  A++RALQLDP++ +A  L+ LA  D     +    +
Sbjct: 220 MKPDPRLGIGLCFWFLKDRPMALSAWERALQLDPKSFKAKLLLNLASFDNVFTNSLSDEQ 279

Query: 253 GMEKMQRAFEIYPYC-------AMALNYLANHFFFTGQHFLVEQLTETALAV--TNHGPT 303
            +E  +R+     +        ++ L  LA+ +F  G+H LVE++    ++    +  P+
Sbjct: 280 FLEGYKRSLTELTHLQLEKTNDSVILLALASFYFSKGKHDLVEKIVGKVVSAFSADDKPS 339

Query: 304 K----------SHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQL 353
           +          S + + L R  ++K D+ ++  Y+  +++ +N+ +  +    GLGQ QL
Sbjct: 340 RKLSSFATKVLSQASFWLGRVAYAKEDFTQSQKYFHEAIR-LNENN--LLAKLGLGQSQL 396

Query: 354 KLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLG---QIEKAQELLRKAAKI----- 405
             G    +L  FE +L+  P   E    LG +Y Q     + E+A  +L +  ++     
Sbjct: 397 SRGSIEESLITFESILKTNPKCLEVNYCLGVLYAQQSSKTKQEQAIHMLERYIRLSNNRG 456

Query: 406 ---------------DPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEV 450
                          +P    A++ L +L    D   +L     A    K+ G +VP+EV
Sbjct: 457 LAVENKNEAEALLNKEPVALNAYLTLSKLYEPKDLSQSLVYLHKAIESRKQTGRDVPLEV 516

Query: 451 LNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHR 510
            NNIGV +F K   + A ++F+ AL        LD        D   + LQ KD+     
Sbjct: 517 YNNIGVFNFSKNSVDVAIENFELALKK------LD--------DLKDAELQ-KDL----- 556

Query: 511 FENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLA---A 567
                        KVT+ +NLAR  E + D   A  +Y  +L +   Y  A LRL    A
Sbjct: 557 -------------KVTISYNLARSHE-VSDQNKAIEMYNSLLQECPHYFSAKLRLLFLDA 602

Query: 568 IAKARNNLQLSIELVNEALKVNGKYPNALSMLG--------DLELKND-DWVKAKETFRA 618
           ++    + +   + + E L  N       S  G         + LK D D V  KET   
Sbjct: 603 VSTNETSKEEIEKEIKELLAQNASDLEIRSFYGWFIKTFGKKIGLKPDADTVHQKETLV- 661

Query: 619 ASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLE---ATHLEKAKELYTRVIVQHTSNL 675
                D  D YA +SL   N +  + N+ ++ K E     +  +A ELYT+V+     N+
Sbjct: 662 ---DFDSHDCYALISLA--NIYCVMANDLKSSKDEEKRKKYFVRAIELYTKVLSIDPKNV 716

Query: 676 YAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMK 735
           +AA G  +V  E  ++    D+  +++++ +         V++NL HV      ++ A++
Sbjct: 717 FAAQGLAIVYIENKEYHKGLDILRKIRDSLND------ISVYLNLGHVLVELKQYSKAIE 770

Query: 736 MYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPS--------NYTLR 787
            Y+    ++  + D +I+ +L R+ Y     +     L +A+  +          N +L 
Sbjct: 771 SYEVAFVRYTDSQDVKIMGFLGRSWYLRGIAEKNLSYLKKALEYSEEALNKHSGRNGSLV 830

Query: 788 FDAGVAMQKFS----ASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGFDEK 843
           F+  VA  +F      S L   +RT +++   +  L  A++  + L++    H   F ++
Sbjct: 831 FN--VAFIQFQIAEFVSKLPVEQRTVEDINEAIINLNEAIQSLNKLASDDEKH-PPFPKE 887

Query: 844 KINTHVEYCKH-LLDAAKIH-REAAEREEQQNRQRQEAARQAALAEEARRKAEEQKKYLL 901
            +        + LL+   +   E  E   Q N + +EA R     EE  RKA+E +  L 
Sbjct: 888 DLKARANLGTNTLLNRLNVCLEETKENIAQLNNKLEEAKR--LREEEEARKAQELESVLA 945

Query: 902 EKRKLEDE--QKRLRQQEE 918
           EKR  E+E  ++R R QE+
Sbjct: 946 EKRTKEEELAKERARLQEQ 964


>gi|430813762|emb|CCJ28920.1| unnamed protein product, partial [Pneumocystis jirovecii]
          Length = 1053

 Score =  196 bits (497), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 245/1006 (24%), Positives = 420/1006 (41%), Gaps = 185/1006 (18%)

Query: 4   VYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQIL 63
           + +P++   + V +    LP DA ++ +IL+ E A  +LW+  + EY +QG V Q   IL
Sbjct: 14  IEVPLKEQGQLVEIDCATLPEDAMELCEILECESASKELWIQFSYEYRRQGYVNQAIDIL 73

Query: 64  EEGSSPEIDEYYADVRYERIAILNALGVYYTYLGK--IETKQREKEEHFILATQYY---- 117
             G   +I       R  ++ + + L   Y    +   +T  +E  E  I    YY    
Sbjct: 74  TRGLKADIS------RENKLPLYSMLAALYLEKARRAPKTTNQEHSESTIQTKDYYHQQV 127

Query: 118 ----NKASRIDMHEPSTWVGKG--QLLLAKGE---VEQASSAFKIVLEADRDNVPALLGQ 168
               N+A+RID       + +    ++ A  E   ++QA   F  VL+ DR+N+ A+LG+
Sbjct: 128 TQALNEANRIDFSFLPNILTRAVWNIMRAASEKTLMDQAGKYFDSVLKTDRNNLFAMLGK 187

Query: 169 ACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDP 228
           A + F+   Y+ +L+ Y+  L   P      R+GIGLC ++L     A+ A++R+L+LD 
Sbjct: 188 ARILFSHKNYTGALKLYQTILSSKPDFIPDPRIGIGLCFWELNMKQDAKAAWERSLELDS 247

Query: 229 ENVEALVALAVMDL-QANEAAGI-------RKGMEKMQRAFEIYPYCAMALNYLANHFFF 280
           +NV +   LA+  L  A    G        +K ++  Q A++     + + N L+++FF 
Sbjct: 248 KNVSSNTLLALYHLYSAFSKTGTSEFLEEYKKSLQYAQNAYKESQEASYSANILSSYFFS 307

Query: 281 TGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA-GLY-YMASVKEINKP 338
                                           ++ +SK +YEKA GLY +  + KE N  
Sbjct: 308 -------------------------------KKNINSK-NYEKASGLYQHSYNTKESN-- 333

Query: 339 HEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYV----------- 387
             FI    GLGQ++L   D   A   FEK+ E  P   E L  LG IY            
Sbjct: 334 --FI-SAIGLGQIKLIQDDIIGAKLIFEKITEQNPKCIEALTILGSIYTYEILSINSKND 390

Query: 388 -QLGQ------IEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALD---------- 430
            QL +      +E+A  L+  + + D  D+  FI L  L    D   +L+          
Sbjct: 391 KQLEKQKAKSLLERAILLINNSTERDFSDSGIFITLAALCEDEDNNISLECKEIYIYYLI 450

Query: 431 ----AFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDS 486
               A++ A  L  +    +  ++LNNIGV++  K    +A Q ++DAL   +  ++   
Sbjct: 451 LMTLAYERALNLEHRFPTNILPQLLNNIGVLYHTKENLINARQFYQDALNQCV--SIGQQ 508

Query: 487 KTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASV 546
           +  T  +DA  +                           T+ +NLAR  EQ  +   A  
Sbjct: 509 ENNTTDVDALVT---------------------------TLTYNLARCEEQAENYEEAKK 541

Query: 547 LYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKN 606
            Y  +L ++ DYV+A +RL  +   +   + + + +   ++ +    +  +  G      
Sbjct: 542 FYEELLQRHPDYVEARVRLCHMEIMKGGTEDTSKKIKRLIETDPDNLDVRAYFG------ 595

Query: 607 DDWVKAKETFRAASDAT-------------DGKDSYATLSLGNWNYFAALRNEKRAPKLE 653
             W  +++ +  AS+               D  D Y+  ++GN N   A R  +    +E
Sbjct: 596 --WYLSRQKWNKASNDNPEQRHYTHTLKYFDKHDRYSLTAMGNLNLRIA-RESRPTTDIE 652

Query: 654 ATH----LEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASG-S 708
                   EKA E + + +     N YAA G  + LAE  Q   +  + ++V+E     S
Sbjct: 653 KEKRQKIYEKAVEFFDKALQLDPKNAYAAQGIAIALAENKQHAKALLILSKVRETLKNES 712

Query: 709 VFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQD 768
           V++ M      +     A  ++ LA+  YQN      +++  +  L   +        ++
Sbjct: 713 VYINMGHCLTEMKQYSRAIESYELALNKYQNRSNLITFSSLGKAWLQRGKEERSLLALKE 772

Query: 769 CKKSLLRAIHLAPSNYTLRFDAGVAMQKFS--ASTLQKTRRTADEVRSTVAELENAVRVF 826
             K   +A+ L P+N  + F+      KF+  A  L + RR+ D++   +  L NA+  F
Sbjct: 773 ALKYTEKALKLQPNNTAIIFNIAFIQFKFAEIARILPENRRSVDDLEYALKILNNAIDTF 832

Query: 827 SHLSAASNLHLHGFD----------------EKKINTHVEYCKHLLDAAKIHREAAEREE 870
           S L+ + +      D                E+ I    E+     + AK+     +R+E
Sbjct: 833 SDLANSKHPPYSKEDIQQRANMGRNTTLRQLERAIQQQKEF--ESTNLAKLDSARQKRKE 890

Query: 871 QQNRQRQEA--------ARQAALAEEARRKAEEQKKYLLEKRKLED 908
           +Q R++ EA         +Q  LAEE RR  +EQ K    KRK E+
Sbjct: 891 EQERKQAEAEALRASEEKKQRELAEE-RRIMQEQIKEWAMKRKEEN 935


>gi|3789905|gb|AAC67538.1| developmental protein DG1071 [Dictyostelium discoideum]
          Length = 581

 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 122/391 (31%), Positives = 221/391 (56%), Gaps = 15/391 (3%)

Query: 525 VTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNE 584
           +T  +NLARL E +     A  LY+ I+ ++ +Y D YLRL+ I K + +   + E + E
Sbjct: 4   ITSTYNLARLYETMGQVNKAEELYKGIIKEHPNYYDCYLRLSCICKQQGDYYEAGEWIRE 63

Query: 585 ALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKD-SYATLSLGNWNYFAAL 643
            L +      A ++ G+L L  ++W  A++ F   ++  D K+ +YA+LSLGN  Y A  
Sbjct: 64  VLDIQPDNQEAWALYGNLHLYKEEWYPAQKNFEQITENPDNKNETYASLSLGNIYYNAKF 123

Query: 644 RNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQE 703
            N  +  K    ++  A++ Y RV+ ++ +N+YAANG G+++AEKG  +++ + F Q++E
Sbjct: 124 SNPDKVEK----YILNAEQFYNRVLTKNPTNIYAANGIGMIIAEKGNLNLAGETFLQIRE 179

Query: 704 AASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQ-ILLYLARTHYE 762
           A+   + V      +NLAH+Y ++G F  A+K+Y+ CL+K     + + I++YLA+ +++
Sbjct: 180 ASMDCIPVS-----VNLAHIYVSKGLFDNAIKLYEGCLKKSTSPKEIETIIMYLAKVYFD 234

Query: 763 AEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENA 822
           A ++ D K++L +AIH+ P N ++ F+  ++++  +   L+K ++ A E  + + ELE A
Sbjct: 235 ANRFYDSKQTLKKAIHMYPHNLSIHFNLAISIEMQATIFLEKHQKNATETFNIIKELEFA 294

Query: 823 VRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEAARQ 882
            R+ + L+   +     F   K  TH    + +L + +   E+  + E    +++EAA +
Sbjct: 295 QRLLTPLANTKSTPKLNFSPSKAKTHQTSIEKILVSLRTEHESIVKIEADLSKKREAAFE 354

Query: 883 AA--LAEEARRKAEEQKKYLLEKRKLEDEQK 911
               L EE R +  E K+ L E  KLE E+K
Sbjct: 355 EVKRLEEEKRIRDLELKQQLEE--KLEAERK 383


>gi|331238707|ref|XP_003332008.1| hypothetical protein PGTG_13960 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
 gi|309310998|gb|EFP87589.1| hypothetical protein PGTG_13960 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
          Length = 1107

 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 252/1022 (24%), Positives = 421/1022 (41%), Gaps = 163/1022 (15%)

Query: 6   IPVQNSEEEVRVALDQL---PRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQI 62
           +P+ N+ E + + L +         +I+ I   E+ P   W   A EY+K+   +    +
Sbjct: 15  VPLNNNTESLELDLAEFCGGEGSVEEIVGIFLQEKLPAKFWTRAAMEYWKRDLKQDAISL 74

Query: 63  LEEGSSPEIDEYYADVRYERIAILNALGVYYTYLG------KIETK--------QREKEE 108
             +G     D+   D   E + +L  L  Y   L       K+ET         Q   +E
Sbjct: 75  ANQGLQALRDQ---DRPSECLPLLCQLATYAINLSRGLPTLKLETPEYDTIPPAQPTADE 131

Query: 109 HFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQ 168
               A  Y N+ASRID   P     +  L LA+   +QA +A + +L+    ++PALLG+
Sbjct: 132 TLEKAAHYINEASRIDSRNPLVLDARATLYLAQKHYDQALTACEEILKERPTHLPALLGK 191

Query: 169 ACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDP 228
           A V F+R  +  +L+ Y++ L++ P      R+GIG C + LG    ARQA++R+L ++P
Sbjct: 192 ARVLFHRKFFRPALKLYQQVLKLAPHVLPDPRIGIGSCFWFLGDQKLARQAWERSLVVNP 251

Query: 229 ENVE--ALVALAVMDLQA-------NEA--AGIRKGMEKMQRAFEIYPYCAMALNYLANH 277
                 A + L +   QA       +EA  A  +K +  +Q  F++    A A   LA+H
Sbjct: 252 GKASQGARLLLGLSHFQASKDIHLPDEAQFAAYQKAISDVQAVFKMDRNNAAAAAVLASH 311

Query: 278 FFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINK 337
                      ++ E A+   N   T   +   LAR++H++G   +A   Y A+      
Sbjct: 312 LLTANNWTTATKMAERAVQYANTASTAVEARLVLARAFHAQGKLNEAMREYRAAA----- 366

Query: 338 PHE--FIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLG----- 390
           P E   +    G+ Q+ +   +F  A+  FE V+   P   E L  L  +   L      
Sbjct: 367 PPERSVLTSILGVAQILVARNEFGIAINMFENVVRRQPRCIEALANLAALRTHLAFTSSS 426

Query: 391 ------QIEKAQELLRKAAKI------------------DPR------DAQAFIDLGELL 420
                 +  KA+EL  +  ++                   PR      D   +I++  L 
Sbjct: 427 STEASSEKTKAKELHEQITRLFATRVKNHSMKPDDEGMMPPRIREVASDPDLYIEIARLS 486

Query: 421 ISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIW 480
             +D   +L A++ + T+ +  G+ +P  +LNNIGV+ ++ G    A +  + AL     
Sbjct: 487 SDTDINRSLKAYRQSLTVREDLGKPIPAMLLNNIGVLEWKNGHLTEAQERIESAL----- 541

Query: 481 LTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNK---VTVLFNLARLLEQ 537
                + T + V+                     G+  E   N+   V +LFNL  + EQ
Sbjct: 542 -----AATASAVV---------------------GDETEREINERTAVCMLFNLGVICEQ 575

Query: 538 IHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKV---NGKYPN 594
             D   A  +Y  IL ++ +YVDA  RLA +  A  N   +  L+ EAL     NG+   
Sbjct: 576 AKDKAKAKDIYERILLRHPEYVDAKARLALMYLAEKNYDKTNALLKEALTSQTGNGE--- 632

Query: 595 ALSMLGDLELKNDDWVKAKETFRAAS-DATDGKDSYATLSLGNWNYFAALRNEKRAPKLE 653
            L  L    L   + +K    F  A+    D  D YA  + G   Y  A  N+   P+  
Sbjct: 633 -LRALYTYFLIESNQIKQARDFTVATLKDHDKSDVYALCASGALLYTQARENKAIGPEAS 691

Query: 654 ---ATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAE-------------KGQF--DVSK 695
              A+   ++ E + + +       +AA G  + LAE              G F  D S 
Sbjct: 692 LDRASKFFRSTEFFEKALQLDPQCAFAAQGLAIALAEHVISPSNVNAPSSNGAFAPDASN 751

Query: 696 ----------DLFTQVQEAAS-GSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKF 744
                      + T+V+EA + GSV+V       NL H ++ +  F  A++ Y    ++F
Sbjct: 752 VRAKNLRDSITILTKVREAHNDGSVYV-------NLGHCHYLRDEFDRAIENYFTASKRF 804

Query: 745 YYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLA-------PSNYTLRFDAGVAMQKF 797
           Y + +  +LLYLAR  Y+         +L  A+          P +  + F+  +  QK 
Sbjct: 805 YDDKNVLVLLYLARAWYQKASKDRSFAALRSALTFVQTAKEHHPKDGAIAFNLALVQQKG 864

Query: 798 SA--STLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHL 855
                 L  ++RT  E+++ +A+ + A   F  L A+       FD    +    Y + L
Sbjct: 865 LELLVDLPPSKRTLAEIKTAIADAQLAQEAFGEL-ASKPAGTVPFDIDIAHQRKRYGESL 923

Query: 856 LDAAKIHREAAEREEQQNRQRQEAARQAALAEEARRKAEEQKKYLLEKRKLEDEQKRLRQ 915
           L       E+ E  E     + E ARQ    E  R++  E ++  LE+   ++E+   ++
Sbjct: 924 LRRTSELSESQEAYESSEIAKIERARQE--RENERQRLAEAERLRLEEIAAKNEELTRKR 981

Query: 916 QE 917
           QE
Sbjct: 982 QE 983


>gi|403412951|emb|CCL99651.1| predicted protein [Fibroporia radiculosa]
          Length = 1096

 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 235/1038 (22%), Positives = 442/1038 (42%), Gaps = 169/1038 (16%)

Query: 11   SEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQILEEGSS-- 68
            S E + + LD L  +  D+LD+L+  +  + +W  +A EY+++G ++   +I +      
Sbjct: 23   SHEVINIELDGLDPNPEDLLDLLREGECKVWIWSRLASEYWRRGWLDAAEKIAQTAIESL 82

Query: 69   ---------PEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNK 119
                     P I    A+V+  R +    L +       + T +R ++EHF  A QY+N 
Sbjct: 83   QANGVGAQLPPIYALLANVQIARASKAPKL-ILQDAREDVMTTERSRDEHFKDAAQYFNS 141

Query: 120  ASRI--DMHEPSTWVG---KGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFN 174
              ++  D  E  T +    +G L +    ++ A  +F  VL     N  ALLG+A + + 
Sbjct: 142  GEKLAADSGEVGTLLAVLTRGVLQMGTRAMDDALRSFDGVLSQKPTNAVALLGKAKILYA 201

Query: 175  RGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPE--NVE 232
            R +++ +L+ ++  L+++P+C    R+GIGLC + +    KA+ A+QR+ +++P   + +
Sbjct: 202  RRQFAQALKLFQTVLKLNPNCLPDPRIGIGLCLWAMDYKAKAKAAWQRSAEVNPNEWSPQ 261

Query: 233  ALVALAVMDLQANEAAGIRK-------GMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 285
             L+ L  ++   NE+    +       G   ++RAF      + A N L   F   GQH 
Sbjct: 262  LLLGLEAINSSRNESQTQEERKNELIVGTRYIERAFRANQRNSAAANALCELFLQKGQHK 321

Query: 286  LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 345
            +  +L E A+  T+     +  Y    R  H+ G   +A  Y+  + +   +P   +   
Sbjct: 322  MALKLAERAIQFTDVKTILTDGYIRAGRVSHTVGSTVEASKYFTRARE--GQPTS-VLAN 378

Query: 346  YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKAL-------GHIYVQLGQIEKAQEL 398
             GL Q+Q+K  +  +A+   + +L+        ++A+        H  V +   ++A E 
Sbjct: 379  IGLAQIQMKHDEIPAAIHTLDSLLQQNHGQQRPVEAMVMLASLRAHPRVGMSSPDQAAER 438

Query: 399  LR-----------------------KAAKIDPR-------DAQAFIDLGELLISSDTGAA 428
            LR                        + KI  R       D   +I++  L    +    
Sbjct: 439  LRARDLFDQVFKALALSEDHHARVDSSPKISGRSARKIAEDMDVYIEMARLWQGENLERM 498

Query: 429  LDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKT 488
              A K A  + + +G+  P  +LNN+ V+ + +G  E+A   ++ A+     +T LDS  
Sbjct: 499  ERALKEASRVCEASGKTDP-RLLNNLAVLQYLEGNLEAARTMYETAI---TQVTTLDS-- 552

Query: 489  KTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLY 548
              ++++  ++                           T+L+NLAR  E+  +   A   Y
Sbjct: 553  --HIVEGLST---------------------------TMLYNLARTYEEQGEETMAKEAY 583

Query: 549  RLILFKYQDYVDAYLRLAAIAK--ARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKN 606
              +L ++ +YVDA LR A +    +RNN   + ELV +AL       N  +      +++
Sbjct: 584  EKLLDRHPEYVDAKLRQAQMLSNVSRNN--EAHELVKQALASQNNNLNLRAFYTYFLVQS 641

Query: 607  DDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPK-LEATH--LEKAKEL 663
             ++  AKE         D  D Y+  + G   Y  A  +   +PK +E      +++ E 
Sbjct: 642  HNFKPAKELVFTTLRDHDKHDIYSLCAAGWIQYHQARESRDASPKGIEERRRGFQRSAEF 701

Query: 664  YTRVIVQHTSNLYAANGAGVVLAEKGQFDVSK---------------------DLFTQVQ 702
            Y + +        AA G  +V AE    ++                       D+F +V+
Sbjct: 702  YEKALHLDPMCAIAAQGLAIVTAEDALGNLGGSLAPTTQDENHRRIKNAREALDIFAKVR 761

Query: 703  EAAS-GSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHY 761
            E+ + GSV+V       N+ H Y+A   F  A++ ++   +++Y   +   LLYL R+ Y
Sbjct: 762  ESLNDGSVYV-------NMGHCYYACDEFDRAIESFETASKRYYGGHNVPTLLYLCRSWY 814

Query: 762  EAEQWQDCKKSLLRAI-------HLAPSNYTLRFDAGVAMQKFSA--STLQKTRRTADEV 812
                      ++  A+       HL P +    ++  +  QK +   S++   +R+  ++
Sbjct: 815  SKANKDQSFSAMCTALQYAQKAYHLHPFDKATLYNIAMIQQKAAEMLSSVPPAKRSLKDL 874

Query: 813  RSTVAELENAVRVFSHLSA-ASNLHLHGFDE------------KKINTHVEYCKHLLDAA 859
            +  + +  NA ++F+ L+A  S L  +  D             +K + H+   +   +  
Sbjct: 875  QRAIEQASNAQKLFASLAADKSPLVPYSRDMADQRRKYGDSVLRKCDEHLAAQRTWEEET 934

Query: 860  KIHREAAEREEQQNRQRQEA---------ARQAALAEEARRKAEEQKKYLLEKRKLEDEQ 910
            +   EAA ++ Q  R++QEA          +QA +  E RRKA EQ        K+E ++
Sbjct: 935  QAKIEAARQKRQHEREQQEALERQRVEELKKQAQVLAEERRKAREQALEWTRDIKMESDE 994

Query: 911  KRLRQQEEHFQR-VKARI 927
            +R R+  +   R VKA +
Sbjct: 995  ERERKAIKKANRKVKAEV 1012


>gi|296418241|ref|XP_002838750.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295634711|emb|CAZ82941.1| unnamed protein product [Tuber melanosporum]
          Length = 1181

 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 244/993 (24%), Positives = 415/993 (41%), Gaps = 160/993 (16%)

Query: 3   CVYIPVQNSEEE-------VRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGK 55
            + IPV   +E+       V V  D LP D +++  +L+ E++P   W+ IA  Y K  K
Sbjct: 28  SIDIPVSAGDEDEDDENAVVEVDPDALPEDPTELCTLLENERSPKQYWMYIALAYAKHDK 87

Query: 56  VEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQ-----------R 104
           V+   +I+ +G   +  E  A    ER+ +L+ L   Y    +   K            +
Sbjct: 88  VDIAIEIITKGLQAKTHEPMA----ERLPMLHLLTWLYLERSREAAKNVAEGSALISEAK 143

Query: 105 EKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEV---------EQASSAFKIVL 155
            K+ +  LATQ  N++SR+D       + +G   + K  V         + A+  F   +
Sbjct: 144 TKDHYLQLATQILNESSRLDPASTLVTLARGVYSVFKASVGTVDKNTHMDNAAKIFDDAV 203

Query: 156 EADR-DNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLG 214
              R  N+ A++G+A V + +GRY  +LE Y+  L   P      R+GIGLC + LG   
Sbjct: 204 RTSRATNMLAIMGRARVLYGKGRYERALESYQEVLTKRPDMDPDPRIGIGLCCWHLGHKD 263

Query: 215 KARQAFQRALQLDPENVEALVALAVMDLQANE---------AAGIRKGMEKMQRAFEIYP 265
            A  A++RAL+LDP +  A +  A+  L                 R  +E  Q+AF++  
Sbjct: 264 DALVAWERALELDPNSKYAHILKALYHLHVTSNLSEYDPEFINNYRLVIEHTQKAFKLDK 323

Query: 266 YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAG 325
              +A    A+HFF    +   E L + A+  ++     +  +++LAR  H +G+YEKA 
Sbjct: 324 QFPLACTTFASHFFIKKGYSQCELLAKKAIEYSDVAAVTADGWFSLARKAHVEGEYEKAL 383

Query: 326 LYYMASVKEINKPHEFIFPY-YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGH 384
            +Y    K  +   E   P   G+GQVQ+ + D  +A   FE ++++ P   E    LG 
Sbjct: 384 GHY----KRSDALREGYLPVKLGIGQVQILMKDLGAAKYTFEAIVQVNPKCIEARSILGT 439

Query: 385 IYVQ--LGQI----------------EKAQELLR--------KAAKIDPRDAQAFIDLGE 418
           +Y    L  I                 KA  LL         +A K D       + L  
Sbjct: 440 LYADEVLSAIPRTGFSASKEDVTVLHRKAISLLENVRFTWKAEAKKNDAHHETILLSLAR 499

Query: 419 LLISSDTGAALDAFKTARTLLK---KAGEEV--PIEVLNNIGVIHFEKGEFESAHQSFKD 473
           L  +     AL        + K     G++V  P+++ NNI  ++++KGE+ +A      
Sbjct: 500 LYENDQPERALQCLLQVEEIYKYLIDNGDDVMIPLQLTNNIATLYWQKGEYNTA------ 553

Query: 474 ALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLAR 533
                          +TY  +A  ++ + K+       +             T+ +NLAR
Sbjct: 554 ---------------RTYYQNALNAIPELKEKDDAADTDA---------LATTLTYNLAR 589

Query: 534 LLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYP 593
             E   +   A   Y  +L  + DYVDA +RLA +A  R   +     + + ++ +G   
Sbjct: 590 CEEAAGNIEEAVKNYEKLLAYHDDYVDANMRLAYLA-LRRGAEDGHRRIQKLMQTDGNNL 648

Query: 594 NALSM----LGDLELK-----NDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALR 644
              ++    LG  + K     +DD    +  ++      +  D Y+ + +GN  Y  A R
Sbjct: 649 EVRALYGWYLGRQKRKHPIVISDD--PEQRHYKHTLQNHEKHDRYSLIGMGNI-YLLAAR 705

Query: 645 NEKRAPKLEATH----LEKAKELYTRVIVQHTSNLYAANGAGVVLAE-KGQFDVSKDLFT 699
           + K+  + E        EKA E + + +     N YAA G  +   E +     +  +F+
Sbjct: 706 DIKKENEQEREKRRKLYEKAVEFFDKALQLDPKNAYAAQGIAIASVEDRKDLKTAISMFS 765

Query: 700 QVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLART 759
           +V+E  S           +N  H       +A A++ Y++ L KF    D   L  L + 
Sbjct: 766 KVKETLSKDAH-----SLVNFGHCLAGLDQWARAIENYESALTKFQLAKDPTTLTCLGKA 820

Query: 760 HY---------EAEQWQDCKKSLL----RAIHLAPSNYTLRFDAGVAMQKFS----ASTL 802
           ++         E E+  +  K+ L    RA+ +AP N    F+  VA  +F       +L
Sbjct: 821 YFSKGRKERTTEPEKSMESFKNALDYAKRALAIAPDNVMYMFN--VAYVQFQIVQFIMSL 878

Query: 803 QKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIH 862
            +T R+ +++ +    LE  ++ FS ++ ++N     +   +I       K+        
Sbjct: 879 PETSRSLEDLEAASKGLEEGIQSFSDIARSNN---PPYPSSEIEARSTMGKNTF------ 929

Query: 863 REAAEREEQQNRQRQEAARQAALAEEARRKAEE 895
           R+  ER  Q+ R+ +E   QA LA EARRK EE
Sbjct: 930 RKQMERAIQKQREYEE-KNQAKLA-EARRKREE 960


>gi|340959291|gb|EGS20472.1| hypothetical protein CTHT_0023040 [Chaetomium thermophilum var.
           thermophilum DSM 1495]
          Length = 1289

 Score =  190 bits (483), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 260/996 (26%), Positives = 428/996 (42%), Gaps = 168/996 (16%)

Query: 4   VYIPVQNSEEE-VRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQI 62
           + IPVQ+ ++E V + L++L  D +++  + + E A    W+ +A  Y KQ K++   ++
Sbjct: 33  IDIPVQDQDDEAVEIDLEELADDPTELCTLFEMEHAARTYWMTVALAYAKQKKIDFAIEM 92

Query: 63  LEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGK---------IETKQREKEEHFI-L 112
           L  G+    +   A+ R E+++I+  L   Y Y  +         +   + + +EH++ L
Sbjct: 93  LMRGA----NALQANPR-EKLSIITCLCWLYLYKSREAPRVAPDNVPASEVKTKEHYLQL 147

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLL--------AKG---------EVEQASSAFKIVL 155
           ATQ  N+ASRI+   P  ++ +G LLL        +KG         + EQ  +A K   
Sbjct: 148 ATQSLNEASRINPAFPPLFLARGVLLLLRASLQPPSKGVGPTGVDSQKAEQLCNALKSFE 207

Query: 156 EADR----DNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSC--PGAIRLGIGLCRYK 209
           EA R     N+ A++G+A   F+ GRY +SL  Y+  L   P    P   R+GIG C ++
Sbjct: 208 EAIRVSQGKNMLAVMGKARALFSLGRYPESLAAYQEVLSKMPDMVDPDP-RIGIGCCFWQ 266

Query: 210 LGQLGKARQAFQRALQLDPENVEALVALAVMDLQA------NEAAGIR---KGM-EKMQR 259
           LG    ARQA++R L+++PE+  A + L +  L A      N    IR   K M E  Q+
Sbjct: 267 LGYKDDARQAWERCLEINPESKTANILLGLYYLDASGHVPTNSPEFIRLYKKAMTEFTQK 326

Query: 260 AFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 319
           +F++     +A +  A +F    Q   V+ L   A+  T+     S  +Y LAR  H  G
Sbjct: 327 SFKLDKNSPLACSTFAGYFLSRKQFDTVDSLAHKAIRYTDVNAVASDGWYLLARKEHYAG 386

Query: 320 DYEKAG-LYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCET 378
           + E+A   Y  A          ++   +GL Q+ +  GD   A    EK+++    N E 
Sbjct: 387 NLERAADCYRRADDARGGAERGYLPAKFGLAQLSVLKGDLGEAKLRLEKIIQ-QSKNYEA 445

Query: 379 LKALGHIYVQ--------------LGQIEKAQELLR--KAAKIDPR-----DAQAFIDLG 417
           +  LG +Y +                + +KA  LL   ++A  DP+     DA   ++L 
Sbjct: 446 MVLLGTLYAEEVFANQSAAVKEDKSAEAKKAIALLEGVRSAWKDPKKNLSPDACVLLNLA 505

Query: 418 ELLISSDTGAALDAFKTARTL-------------------LKKAGEE-VPIEVLNNIGVI 457
            L  S     AL   +    L                   +K A  + +P ++LNNIG  
Sbjct: 506 RLYESEQPDKALQCLQQVEQLELSQIPRSEYPPDTEDEAVIKAAIRKLLPPQLLNNIGCF 565

Query: 458 HFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNH 517
           + ++G+   A + F+ AL     +    S      ID  A +                  
Sbjct: 566 YSQEGKHTLATEFFQAALDSCARI----SSQSDSDIDTDALL------------------ 603

Query: 518 VELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQL 577
                   T+ FNL R  E      AA   Y  +L ++ DY DA  RLA I   RN    
Sbjct: 604 -------TTISFNLGRSYEYEGQIDAAVETYERLLSRHSDYTDARTRLAYIKLRRN--PS 654

Query: 578 SIELVNEALKVNGKYPNALSM-------LGDLELKNDDWVKAKET----FRAASDATDGK 626
           + E  +   K+  + P  L +       LG +  K      A++     F+      D  
Sbjct: 655 NKEGPDAVAKLYQENPQDLEVRALYGWFLGRVNAKKRPANLAEDPEQRHFKHTLQNYDKH 714

Query: 627 DSYATLSLGNWNYFAA--LRNE--KRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAG 682
           D YA +++GN +  AA  +R E  +   K  AT+  +A E + + +     N YAA G  
Sbjct: 715 DRYALVAMGNLHLMAAREMRRETDQDRQKRSATY-SRAVEFFDKALQLDPKNAYAAQGIA 773

Query: 683 VVLAE-KGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCL 741
           + L E K  +  +  +F +V+E       +Q   V++NL H+Y     F  A++ Y+  L
Sbjct: 774 IALIEDKKDYTNALQIFIKVRET------IQDAHVYVNLGHLYAELKQFTKAIESYEIAL 827

Query: 742 RKFYYNTDAQILLYLART---HYEAEQWQDCKKSLLR----AIHLAPSNYTLRFDAG--- 791
            K     DA IL  L RT      AE+  D  K+ L      + +AP     +F+     
Sbjct: 828 SKEGKARDANILSCLGRTWLNKGRAERNLDAYKTALEYAENTLSVAPEQLHFKFNVAFVQ 887

Query: 792 --VAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGFD-EKKINTH 848
             +AM   S    + + R + ++      LE A++    ++AA N      D E++ N  
Sbjct: 888 IQIAMLLIS---FRDSERNSFQLEQASEGLEAAIKTLDEIAAAPNPPYPKHDLEQRANMA 944

Query: 849 VEYCKHLLDAAKIHREAAERE-EQQNRQRQEAARQA 883
               +  L+ A     A++RE E +N+++ +AA +A
Sbjct: 945 RNTMRKQLERAL----ASQREYEARNKEKLQAAMEA 976


>gi|331224468|ref|XP_003324906.1| hypothetical protein PGTG_06443 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
 gi|309303896|gb|EFP80487.1| hypothetical protein PGTG_06443 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
          Length = 1095

 Score =  189 bits (481), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 251/1010 (24%), Positives = 419/1010 (41%), Gaps = 151/1010 (14%)

Query: 6   IPVQNSEEEVRVALDQL---PRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQI 62
           +P+ N+ E + + L +         +I+ I   E+ P   W   A EY+K+   +    +
Sbjct: 15  VPLNNNTESLELDLAEFCGGEGSVEEIVGIFLQEKLPAKFWTRAAMEYWKRDLKQDAISL 74

Query: 63  LEEGSSPEIDEYYADVRYERIAILNALGVYYTYLG------KIETK--------QREKEE 108
             +G     D+   D   E + +L  L  Y   L       K+ET         Q   +E
Sbjct: 75  ANQGLQALRDQ---DRPSECLPLLCQLATYAINLSRGLPTLKLETPEYDTIPPAQPTADE 131

Query: 109 HFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQ 168
               A  Y N+ASRID   P     +  L LA+   +QA +A + +L+    ++PALLG+
Sbjct: 132 TLEKAAHYINEASRIDSRNPLVLDARATLYLAQKNYDQALTACEEILKERPTHLPALLGK 191

Query: 169 ACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDP 228
           A V F+R  +  +L+ Y++ L++ P      R+GIG C + LG    ARQA++R+L ++P
Sbjct: 192 ARVLFHRKFFRPALKLYQQVLKLAPHVLPDPRIGIGSCFWFLGDQKLARQAWERSLVVNP 251

Query: 229 ENVE--ALVALAVMDLQA-------NEA--AGIRKGMEKMQRAFEIYPYCAMALNYLANH 277
                 A + L +   QA       +EA  A  +K +  +Q  F++    A A   LA+H
Sbjct: 252 GKASQGARLLLGLSHFQASKDIHLPDEAQFAAYQKAISDVQAVFKMDRNNAAAAAVLASH 311

Query: 278 FFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINK 337
                      ++ E A+   N   T   +   LAR++H++G   +A   Y A+      
Sbjct: 312 LLTANNWTTATKMAERAVQYANTASTAVEARLVLARAFHAQGKLNEAMREYRAAA----- 366

Query: 338 PHE--FIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLG----- 390
           P E   +    G+ Q+ +   +F  A+  FE V+   P   E L  L  +   L      
Sbjct: 367 PPERSVLTSILGVAQILVARNEFGIAINMFENVVRRQPRCIEALANLAALRTHLAFTSSS 426

Query: 391 ------QIEKAQELLRKAAKI------------------DPR------DAQAFIDLGELL 420
                 +  KA+EL  +  ++                   PR      D   +I++  L 
Sbjct: 427 STEASSEKTKAKELHEQITRLFATRVKNHSMKPDDEGMMPPRIREVASDPDLYIEIARLS 486

Query: 421 ISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIW 480
             +D   +L A++ + T+ +  G+ +P  +LNNIGV+ ++ G    A +  + AL     
Sbjct: 487 SDTDINRSLKAYRQSLTVREDLGKPIPAMLLNNIGVLEWKNGHLTEAQERIESAL----- 541

Query: 481 LTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNK---VTVLFNLARLLEQ 537
                + T + V+                     G+  E   N+   V +LFNL  + EQ
Sbjct: 542 -----AATASAVV---------------------GDETEREINERTAVCMLFNLGVICEQ 575

Query: 538 IHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKV---NGKYPN 594
             D   A  +Y  IL ++ +YVDA  RLA +  +  N   +  L+ EAL     NG+   
Sbjct: 576 AKDKAKAKDIYERILLRHPEYVDAKARLALMYLSEKNYDKTNALLKEALTSQTGNGE--- 632

Query: 595 ALSMLGDLELKNDDWVKAKETFRAAS-DATDGKDSYATLSLGNWNYFAALRNEKRAPK-- 651
            L  L    L   + +K    F  A+    D  D YA  + G   Y  A  N+   P+  
Sbjct: 633 -LRALYTYFLIESNQIKQARDFTVATLKDHDKSDVYALCASGALLYTQARENKAIGPEAS 691

Query: 652 LEATHLE-----------KAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKD---L 697
           L+   L+            A  L   VI     N  ++NGA    A   +    +D   +
Sbjct: 692 LDRATLQLDPQCAFAAQGLAIALAEHVISPSNVNAPSSNGAFAPDASNVRAKNLRDSITI 751

Query: 698 FTQVQEAAS-GSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYL 756
            T+V+EA + GSV+V       NL H ++ +  F  A++ Y    ++FY + +  +LLYL
Sbjct: 752 LTKVREAHNDGSVYV-------NLGHCHYLRDEFDRAIENYFTASKRFYDDKNVLVLLYL 804

Query: 757 ARTHYEAEQWQDCKKSLLRAIHLA-------PSNYTLRFDAGVAMQKFSA--STLQKTRR 807
           AR  Y+         +L  A+          P +  + F+  +  QK       L  ++R
Sbjct: 805 ARAWYQKASKDRSFAALRSALTFVQTAKEHHPKDGAIAFNLALVQQKGLELLVDLPPSKR 864

Query: 808 TADEVRSTVAELENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAE 867
           T  E+++ +A+ + A   F  L A+       FD    +    Y + LL       E+ E
Sbjct: 865 TLAEIKTAIADAQLAQEAFGEL-ASKPAGTVPFDIDIAHQRKRYGESLLRRTSELSESQE 923

Query: 868 REEQQNRQRQEAARQAALAEEARRKAEEQKKYLLEKRKLEDEQKRLRQQE 917
             E     + E ARQ    E  R++  E ++  LE+   ++E+   ++QE
Sbjct: 924 AYESSEIAKIERARQE--RENERQRLAEAERLRLEEIAAKNEELTRKRQE 971


>gi|395332634|gb|EJF65012.1| RNA polymerase II-associated protein [Dichomitus squalens LYAD-421
           SS1]
          Length = 1094

 Score =  188 bits (478), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 224/1008 (22%), Positives = 418/1008 (41%), Gaps = 161/1008 (15%)

Query: 12  EEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQILE------- 64
           +E + V LD L  +  D+L++LK  Q  + +W  +A EY+++G ++   +I +       
Sbjct: 21  QEVITVELDSLDPNPDDLLEVLKEGQCKVWIWTRLAAEYWRRGLLDAAEKIAKTALQALQ 80

Query: 65  ----EGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKA 120
                GS   +  + A ++    A    L +      ++   +R +E+++   T Y+N  
Sbjct: 81  DTDSSGSVSPVFSFLATLQIAMAAKAPKLILTDAVHDRM-VAERTREDYYKEGTMYFNSG 139

Query: 121 SRI-----DMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNR 175
            R+     + H   + + +G L L+ G+ + A+  F  VL     NV ALLG+A + + R
Sbjct: 140 ERVAAEYGESHMMLSSLTRGILQLSSGQWDDAARTFDSVLSDKPTNVVALLGKAKIAYAR 199

Query: 176 GRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV 235
            +Y+ SL+ ++R LQ++P+C    R+GIGLC + +    KA+ A+QR+++++P    A +
Sbjct: 200 RQYTQSLKLFQRVLQLNPTCLPDPRIGIGLCLWAMDHKAKAKAAWQRSVEVNPGEWSAHL 259

Query: 236 ALAVMDLQANEAAGIRK---------GMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFL 286
            L +  L A++  G  +         G   ++RAF      + A N L   F   GQ  +
Sbjct: 260 LLGLEALNASKNEGQSEEERREEFLTGTRLIERAFNANQRNSAAANALCELFLQKGQTKM 319

Query: 287 VEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYY 346
             +L E  +   +        Y    R  H +G  + A  ++    KE  K  + +    
Sbjct: 320 ALKLAERTIQFADVKGILCDGYIRAGRVTHREGRLQDATSHFT-KAKEARK--DSVLATI 376

Query: 347 GLGQVQLKLGDFRSALTNFEKVLEI--YPDNCETLKALGHIYVQ---------------- 388
           GL QVQLK  +   A+   +  L+    P + E +  L  I                   
Sbjct: 377 GLAQVQLKNDETAGAIHTLDTFLQTPQNPKSVELMAMLASIRATSRPGMTDKDKVEEKAR 436

Query: 389 ------------------LGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALD 430
                             L Q+    + L  +A+    D + FI++ +L           
Sbjct: 437 ARDLFDRVCKFIGAGTDGLAQLNGQTQNLTPSARKLGEDTEMFIEIAKLYQDESIERMER 496

Query: 431 AFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKT 490
           A+K A    + +G   P  ++NN+G +   +G F+ A   ++ AL            T  
Sbjct: 497 AYKQALQNSEASGRIEP-RLVNNLGALQHLEGHFDEARAMYETAL------------THA 543

Query: 491 YVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRL 550
             +D S +                           ++L+NLAR+ E+  D + A   Y  
Sbjct: 544 ASLDQSTAEAM----------------------STSILYNLARVYEEQADVMKAKEAYDK 581

Query: 551 ILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWV 610
           +L ++ +Y DA LR A +    N    + EL+ +AL       N  +      ++++   
Sbjct: 582 LLTRHPEYADAKLRQAQMLAEMNQYNDAHELIKQALASQPNNLNLRAFYTHFLVQSNQAK 641

Query: 611 KAKETFRAASDATDGKDSYATLSLGNWNYFAALRN---EKRAPKLEATHLEKAKELYTRV 667
            AK+         D  D Y+  + G   Y  A  N    +   K      +++ E Y + 
Sbjct: 642 YAKDFVFVTLRDHDKYDVYSLCAAGWLQYHQARENRDGSQEGIKDRRRGFQRSAEFYEKA 701

Query: 668 IVQHTSNLYAANGAGVVLAEKGQFDVSK---------------------DLFTQVQEAAS 706
           +        AA G  +V+AE    ++                       D+F +V+E+ +
Sbjct: 702 LQLDPLCAVAAQGLAIVVAEDALGNLGGALGPPAPDENGKRLKNSREALDIFAKVRESIN 761

Query: 707 -GSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQ 765
            GSV+        N+ H ++A+  F  A++ Y+   ++FY+N +   LL L R  Y    
Sbjct: 762 DGSVYA-------NMGHCHYARDEFDKAIESYETASKRFYHNKNVSALLCLCRAWYAKAN 814

Query: 766 WQDCKKSLL-------RAIHLAPSNYTLRFDAGVAMQKFSA--STLQKTRRTADEVRSTV 816
                 S+        +A+HL P +  + ++  +  QK +    ++   +R+  +++  +
Sbjct: 815 KDQSFSSMTTALQYAQKALHLHPFDKAILYNIAMIQQKAAELLMSVPPAKRSLKDLQKAI 874

Query: 817 AELENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHR------------- 863
            +  +A ++F+ L AA    L  ++    +   +Y + +L   + H              
Sbjct: 875 EQAGHAQKLFASL-AADKSPLVPYNRDLADQRRKYGESMLRRCEDHLATQKQWEADAQAK 933

Query: 864 -EAAEREEQQNRQRQEAARQAALAEEARRKAEEQKKYLLEKRKLEDEQ 910
            EAA +  Q+ ++RQ+AA +A L EE R++AE+    L E+R++  EQ
Sbjct: 934 IEAARQRRQEEKERQDAAERARL-EELRKQAEK----LAEERRIAREQ 976


>gi|219109906|ref|XP_002176706.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217411241|gb|EEC51169.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 1346

 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 261/1113 (23%), Positives = 444/1113 (39%), Gaps = 237/1113 (21%)

Query: 27   SDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQILEEG-----------SSPEIDEYY 75
            S +L +LK E A L  W      Y  Q K  +   ILEE             S ++D   
Sbjct: 60   STLLHVLKDESAELSTWADAGWHYMVQKKNRESLTILEEACDTTAATTTTTPSNDVD--- 116

Query: 76   ADVRYERIAILNALGVYY--------TYLGKIETKQREKEEHFILATQYYNKASRIDMHE 127
               + ER+ IL A G+ +           G    +    +E    A Q + +A +ID   
Sbjct: 117  ---KTERVRILAATGIAHLSSNGAADATSGNTAKRSNVLDEARQQADQKFTQAGKIDPFF 173

Query: 128  PSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKR 187
            P TW+G+G L L +G+ +QA+  F+  L+     +PALLG A V F +G Y+ +   Y +
Sbjct: 174  PMTWIGRGMLNLWQGKHDQATFFFQTTLKQCGPVLPALLGTAAVSFAQGDYTAAQTAYGQ 233

Query: 188  ALQVHPSCPGAI-RLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANE 246
            AL+ +P   GA  R+G GL  Y LGQ+ +A+ AF+RA  +DPENVEA+V  A++D+ + +
Sbjct: 234  ALRKYPHASGAASRVGFGLASYALGQVDRAKAAFRRATAIDPENVEAMVGTAILDMASVD 293

Query: 247  ------AAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFF-------------------- 280
                  AA + + +  M  A  +    AM  N+LANH+F+                    
Sbjct: 294  VSDKDYAAKMEEAIRVMSMANLLNHENAMVQNHLANHYFWKWTPVNGTVEVTKGSQLVQM 353

Query: 281  --------TGQHFLVEQLTETALA-VTNHGPTKSHSYYNLARSYHS---------KGDYE 322
                     G+   +    ET +  V +     + S + +  S+           K DY+
Sbjct: 354  PSQAVPLEPGERIRIGTKFETTVQDVEDDSNNNTASTFTVTDSWSEGSATGLKVWKKDYD 413

Query: 323  KA-------------------GLYYMASVKEINKPHEFIFPYY---------------GL 348
            +                     L+++A V  +    +    +Y               GL
Sbjct: 414  RVIALAKGAYGSTNVQSMQAESLFFLARVYHVRGETDHALKFYEKACKLAPALTPARFGL 473

Query: 349  GQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLG-QIEKAQELLRKAAKIDP 407
             Q  +   D+ +A    ++VL    +  + L  LG +  + G Q+E+    LRKA ++DP
Sbjct: 474  AQTLIVKEDYSAAKKQLQQVLATASNATDALALLGLLEARSGKQVEEGLMHLRKATELDP 533

Query: 408  RDAQAFIDLGELL--ISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFE 465
             +    +     L    ++   +L+ +K A  L+++   +V  E+  N GV+  E    +
Sbjct: 534  LNTDLVVLEAMALQKYENNNVKSLERYKKALLLMERKTTKVSYEIYANCGVLCHELKRHD 593

Query: 466  SA------------HQSFKDA----LGDG---------------------IWLTLLDSKT 488
             A               FK A    L DG                     + + +LD  +
Sbjct: 594  EALDMYRRALAVLDEDGFKGAAVFQLADGPERGRIRHVDNAMFNAFVNSNLLVEVLDRHS 653

Query: 489  KTYV-------IDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIH-D 540
            KT+V        D +  + +   + L   FE     V        ++  LA   + +  D
Sbjct: 654  KTFVKVLDVLEADVAGILSKGDRVSLGDGFET--KVVSWESRDGAIVLELADEYDPMDTD 711

Query: 541  TVAASVLY--RLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSM 598
            +  A +L      L    + +     +A + +A      +IE+    LK N  Y N+   
Sbjct: 712  SKKAPLLVVRENNLLSIPEAITVAFNIARLHEATGRTVAAIEIHKAILKRNPAYVNSYLR 771

Query: 599  LGDLELKNDDWVKAKETFRAASDATDGKDSYAT------LSLGNW----NYFAALRNEKR 648
            L  + +      +  E  + A+    G     T      LSL +W    + F  L + K+
Sbjct: 772  LACIAVDCGSLKEGSEWLKIAASTAPGNPEVLTLVGNLHLSLCDWAPAQSVFDGLLS-KK 830

Query: 649  APKLEA-----------------------THLEKAKELYTRVIVQHTSNLYAANGAGVVL 685
             P ++A                        HL+ A + Y R++ +  +N YAANG G VL
Sbjct: 831  IPNVDAYASLSLGNIYFANLHVNEDKRYDKHLQYAADYYRRILAKDPANAYAANGIGTVL 890

Query: 686  AEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFY 745
            AEK +   +K++F +V+E +  S+    PD  +NL H++ AQ     A++MY N +++  
Sbjct: 891  AEKAEIFKAKEVFNRVREVSGDSI----PDALLNLGHIFLAQKKHPEALQMYTNYMKRTE 946

Query: 746  YNTDA-----------QILLYLARTHYE----AEQWQDCK--------KSLLRAIHLA-- 780
              T              +LLY+A   ++     E   D          +  ++ ++LA  
Sbjct: 947  DGTTPTTAKSRVDDVVSVLLYIAFAFFDWARHTELANDSSAAPADGRYREAMQHLNLAIG 1006

Query: 781  -PSNYTLRFDAGVAMQKFSAST--LQKTRRTADEVRSTVAELENAVRVFSH-LSAASNLH 836
              S   L     + M K  A+   LQK  R    +  +V E+E A+R           + 
Sbjct: 1007 KGSKQDLVLKYNLCMTKLQAANCVLQKLTRN---IPRSVEEVEEALRGLEESFQIVEQIV 1063

Query: 837  LHGFDEKKINTH-------VEYCKHLLDAAKIH----REAAEREEQQNRQRQEAARQAAL 885
                D KK+N         V++CK  + +A+ H    R+ A+  E +   R+ AA +A +
Sbjct: 1064 KDKADGKKVNISSTTLQDFVKHCKANILSAQSHLEDERKRAKEAEVEREIRRLAAEEATI 1123

Query: 886  AEEARRKAEEQKKYLLEKRKLEDEQKRLRQQEE 918
             E  R        + L++ K +  + +++Q EE
Sbjct: 1124 KERLRMDQAAMDAHKLQEEKDQKAEAKMKQVEE 1156


>gi|448119593|ref|XP_004203770.1| Piso0_000789 [Millerozyma farinosa CBS 7064]
 gi|359384638|emb|CCE78173.1| Piso0_000789 [Millerozyma farinosa CBS 7064]
          Length = 1092

 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 249/1032 (24%), Positives = 443/1032 (42%), Gaps = 196/1032 (18%)

Query: 1   MACVYIPVQNSEEEVRVALD-QLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQF 59
           ++ + IP+ NS + V + LD +LP D+ ++++ L+AE  PL  W+ +A  Y ++G  +  
Sbjct: 19  LSILDIPL-NSGQIVSINLDDELPEDSKELINFLRAESCPLKYWIAVAIAYAQRGIFDGS 77

Query: 60  RQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNK 119
           ++++E   +  I ++  + + +   +L  + VY  Y     ++  EK+    LA Q  N+
Sbjct: 78  KEVVENALA--ISQFSNEDKVKIRVVL--VWVYLKYA----SQGIEKDNSLNLAQQGINE 129

Query: 120 ASRID--MHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGR 177
            S       + S  + K  L L + ++EQ+   F  VL+A+ +N  A+LG+A +  N+ +
Sbjct: 130 LSNAGGVSGDISYLLSKAVLHLYRDDIEQSLDTFDAVLKANYNNCFAILGKAHIILNQTK 189

Query: 178 -YSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVA 236
            Y+++L+ Y++ L ++P      R+GIGLC + L     A +++QRAL++DP+NV+A + 
Sbjct: 190 NYANALKLYQQVLILNPLMKPDPRIGIGLCFWFLKDEKMAIKSWQRALEIDPQNVKAKIL 249

Query: 237 LAVM-------------DLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQ 283
           L +              D ++N  A + + +     A    P     L  LA+++F    
Sbjct: 250 LNLAEFNTAFNYSLNDEDFRSNYQACLNQVVTIYNEA----PNDISVLLTLASYYFSKKN 305

Query: 284 HFLVEQLTETALAVTN-----------------HGPTKSHSYYNLARSYHSKGDYEKAGL 326
           + +V++L E  +   +                      S +   L R + +K D+ +A  
Sbjct: 306 YDVVQKLCEKVIGEVSESAKSGKASSSSKLSRFQSNVLSQTALWLGRVFFAKSDFIQAQR 365

Query: 327 YYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIY 386
           Y+  ++K +N+ +  +    GLG  Q+  G    A   FE +L+  P   E    LG +Y
Sbjct: 366 YFHEAIK-LNENN--LLAKLGLGHSQINRGSTEEATITFESILKTNPKCSEVNYCLGMLY 422

Query: 387 V--------QLG-QI-------------------EKAQELLRKAAKIDPRDAQAFIDLGE 418
                    +LG QI                   E   ELL K    +P    A++ L  
Sbjct: 423 AKHKSRRKQELGIQILERYIRLCNNRGLSDNKNEEDNFELLNK----EPVILNAYLTLSR 478

Query: 419 LLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEF-ESAH--------- 468
           L  S D   +L+  K A    ++  ++VP+E+ NNIGV  F K  + ESA          
Sbjct: 479 LYESRDINQSLNYLKKAIESRRQIKQDVPLEIYNNIGVFQFLKSNYSESAENFQKSYEKL 538

Query: 469 ---QSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKV 525
              QSF D  GD     L+D K+                                   KV
Sbjct: 539 EAAQSFTDETGD----VLMDLKSDL---------------------------------KV 561

Query: 526 TVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIA-----KARNNLQLSIE 580
           ++ FNLAR  E I D   A  +Y  +L +   Y  A LRL  +       A++ ++   E
Sbjct: 562 SLSFNLARSKE-ISDQSDAIEIYNGLLKECPHYFSAKLRLLFLNCLINDSAKDKIK---E 617

Query: 581 LVNEALKVNGKYPNALSMLG--------DLELKNDDWVK-AKETFRAASDATDGKDSYAT 631
            V E L V+       S  G         L +K DD  K  K+T        D  D YA 
Sbjct: 618 EVEEMLSVSASDLEIRSFYGWFSKNFGKKLGMKPDDDTKHQKDTLV----EYDSHDCYAL 673

Query: 632 LSLGNWNYFAALRNEKRAPKLE--ATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKG 689
           LSL N  Y    R+ K + + E    +  +A EL+++V+     N++ A G  +V  E  
Sbjct: 674 LSLANI-YCIMARDIKGSSQDEKKKKYYIRAIELFSKVLSVDPKNVFGAQGLAIVYIENK 732

Query: 690 QFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTD 749
           + +   +L  +++++ +         V++NL HV      FA +++ Y+  L ++    D
Sbjct: 733 ELNKGLELLRKIRDSLND------ISVYLNLGHVMLELKQFAKSIEHYEIALMRYSNGND 786

Query: 750 AQILLYLARTHYEAEQWQD-----------CKKSLLRAIHLAPSNYTLRFDAGVAMQKFS 798
             IL +L R  Y     +            C+++L     L  S     F   +A  +F 
Sbjct: 787 PNILSFLGRAWYMRGMSEKNLSFMNTALSYCERALSLTTGLKSS-----FKFNIAYVQFQ 841

Query: 799 ----ASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKH 854
                + L   +R  ++++  +  L+ A+   + L++    H   + +  + +      +
Sbjct: 842 IAELVTKLPVEQRKVEDIKEAITNLQKAIESLNQLASDEEKH-PPYPKSDLKSRASLGTN 900

Query: 855 -LLDAAKIHREAAEREEQQNRQRQEAARQAALAEEARRKAEEQKKYLLEKRKLEDEQKRL 913
            LL+      EA  +  QQ+ QR          EEA+R  EE++  +  +R+ E+ + + 
Sbjct: 901 TLLNRLNTCLEATIKNVQQSEQRM---------EEAKRLREEERARI--QREQEETRAKQ 949

Query: 914 RQQEEHFQRVKA 925
           R++EE   + +A
Sbjct: 950 REKEEELAKERA 961


>gi|281203357|gb|EFA77557.1| RNA polymerase II complex component [Polysphondylium pallidum
           PN500]
          Length = 710

 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 129/402 (32%), Positives = 224/402 (55%), Gaps = 22/402 (5%)

Query: 525 VTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNE 584
           +T  +NL RL E +++   A  LY  IL ++ +Y+D Y+R+A++ +A  N   +IE + E
Sbjct: 205 ITTTYNLGRLYESMNNFSRARDLYVGILGEHPNYLDCYMRIASVCRAEGNDFEAIEWIKE 264

Query: 585 ALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALR 644
           AL V+     A S+ G L L  + W  A+  F    D +   D YA+L+LGN  + A  +
Sbjct: 265 ALNVDPNNAEAWSLYGSLHLSKEQWNFAQRKFEQIIDLS-KTDPYASLALGNLYFQAKNQ 323

Query: 645 NEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEA 704
           N +R  K    +L  A+  YT+ +  + +N+YAANG G+V  EKG   ++ ++F Q++EA
Sbjct: 324 NPERYDK----YLTLAETYYTKTLRNNPNNIYAANGLGMVAFEKGNLHLATEIFVQLREA 379

Query: 705 ASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQ----ILLYLARTH 760
           A     + +  V +NLAHVY  +  F  A+++Y+ CL+K    +DA+    I LYL++  
Sbjct: 380 A-----IDVQSVSLNLAHVYMEKKLFDFAIRLYEGCLKKC---SDAKELELIYLYLSKAL 431

Query: 761 YEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELE 820
           +EA+++ +CK+ L +AIH++P+N  L F+  + ++K++A  +   ++T  +  +   E  
Sbjct: 432 FEAQRYSECKQILKKAIHISPANMVLWFNLALTIEKYAAMFIHTAKKTLFDYSNLQKETA 491

Query: 821 NAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAERE--EQQNRQRQE 878
            A  +   +S + N  L GFD KK  TH++    L    KI  E    E  E +N +++E
Sbjct: 492 YARHLLMSISNSKNTKL-GFDVKKCKTHLQSLDEL--QKKIGDEVKNLEIIELENSKKRE 548

Query: 879 AARQAALAEEARRKAEEQKKYLLEKRKLEDEQKRLRQQEEHF 920
            A Q ++ +   R+ EE ++    + KLE+E++   +Q + F
Sbjct: 549 IALQESIKKAEEREREEHERKAALQAKLEEEERLAAKQAKEF 590



 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 123/428 (28%), Positives = 200/428 (46%), Gaps = 79/428 (18%)

Query: 4   VYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQIL 63
           +YIP++NS++ V+V+ + LP    D+L ILK E APLD+WL I+ EY+KQ  + +F +IL
Sbjct: 5   IYIPIKNSDKHVKVSTENLPH-VQDVLQILKGEIAPLDIWLKISVEYYKQDMINEFIEIL 63

Query: 64  EEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRI 123
            +   PE+++ Y+D +  RIA+LN+L  YYT  G  E  +  ++++F  AT ++NKA +I
Sbjct: 64  NQVLEPEVEKLYSDSKLGRIAMLNSLASYYTQAGSQERDKIRRDDYFNKATFHFNKAQKI 123

Query: 124 DMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLE-ADRDN-------VPALLGQACV---- 171
           D H   TWVG   LLL++G++E A + F  VL  A +D        +PA LGQ  +    
Sbjct: 124 DSHISLTWVGIAVLLLSRGDMEHAETHFLNVLNLASKDPQSIFLPVLPAQLGQGLLAEAE 183

Query: 172 ------------------------EFNRGRYSDSLEFYKRA-------LQVHPSCPGAIR 200
                                    +N GR  +S+  + RA       L  HP+      
Sbjct: 184 QIYLEVIQDSGFTLEDYKSVNITTTYNLGRLYESMNNFSRARDLYVGILGEHPNYLDCYM 243

Query: 201 LGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRA 260
               +CR + G   +A +  + AL +DP N EA      + L   +    ++  E++   
Sbjct: 244 RIASVCRAE-GNDFEAIEWIKEALNVDPNNAEAWSLYGSLHLSKEQWNFAQRKFEQIIDL 302

Query: 261 FEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGD 320
            +  PY ++AL  L    +F  +               N  P +   Y  LA +Y++K  
Sbjct: 303 SKTDPYASLALGNL----YFQAK---------------NQNPERYDKYLTLAETYYTK-- 341

Query: 321 YEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLK 380
                     +++  N P+  I+   GLG V  + G+   A   F ++ E   D      
Sbjct: 342 ----------TLR--NNPNN-IYAANGLGMVAFEKGNLHLATEIFVQLREAAIDVQSVSL 388

Query: 381 ALGHIYVQ 388
            L H+Y++
Sbjct: 389 NLAHVYME 396


>gi|213401323|ref|XP_002171434.1| tetratricopeptide repeat protein [Schizosaccharomyces japonicus
           yFS275]
 gi|211999481|gb|EEB05141.1| tetratricopeptide repeat protein [Schizosaccharomyces japonicus
           yFS275]
          Length = 1044

 Score =  184 bits (466), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 240/959 (25%), Positives = 412/959 (42%), Gaps = 134/959 (13%)

Query: 4   VYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQIL 63
           + IP+   ++ V +    LP DAS+I DIL  EQ+  + W   A EY  +G  EQ   IL
Sbjct: 14  IEIPLLGHDQSVEIDCTSLPTDASEICDILTNEQSEKEFWTRFAYEYITRGMSEQAISIL 73

Query: 64  EEGSSPEIDEYYADVRYERIAILNA-LGVYYTYLGKIETKQR--EKEEHFILATQYYNKA 120
            +G     D+       E  A  NA L   Y    ++  + R   +EE+   A  + +K 
Sbjct: 74  TKGLEVLTDD-------ESQAAFNAYLAAIYMQQARLAGRTRGANREEYLNRAQSFLDKI 126

Query: 121 SRIDMH-EPSTWV----GKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNR 175
           S      +P+  +    G  +   +   ++ A   +  VL+    NV AL+G+A V +++
Sbjct: 127 SGSHRQWDPALLLQATFGIMKSPKSNSTLDAALHGYDRVLQKSGANVFALMGKALVLYHK 186

Query: 176 GRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPEN--VEA 233
             +  +L+FY+RAL  +PS     R+GIGLC ++L    +A  A+ RA +L+P N  +  
Sbjct: 187 KNFRSALKFYQRALVSNPSFQPDPRIGIGLCFWQLDMKEEAHAAWTRAQELNPSNYAIGT 246

Query: 234 LVAL-----AVMDLQANE-AAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLV 287
            ++L     A  +L   E  A   + +   Q+AF+  P  A+A   LA  F +T ++  +
Sbjct: 247 YLSLYHYDRAFKNLGTEEFVANYSQALNYTQKAFKACPTNAVAACILAG-FTYTKKN--L 303

Query: 288 EQLTETALAVTNHGPTKSHS---YYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFP 344
           E   + A AV ++  T S S   Y+ + R+YH  G Y++A   Y    + I   H  +  
Sbjct: 304 EACIKLANAVVHNAFTPSLSADGYFWMGRAYHQLGKYDEAMKCYQ-QARSIQDNH--LLS 360

Query: 345 YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQE--LLRKA 402
           Y G+GQ+Q+   D+ SA   FE++ E  P   E L  LG +     + + A+   LL +A
Sbjct: 361 YMGIGQIQILQSDYTSAKLTFERISEQAPKCAEALIILGCLNASDPKADPAKPKMLLERA 420

Query: 403 AKI-----DPR--DAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIG 455
             I      PR  D+   I    L    D   +L   + A   ++ A      E+LNN+G
Sbjct: 421 FNILSSSKIPRVVDSDLLITQARLWEKDDASKSLKYLEKALAFIRDAQMVETPELLNNVG 480

Query: 456 VIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDG 515
           V+ ++   +  A + F+ A              KT + +                  NDG
Sbjct: 481 VLEYQLFNYGDALKHFEAA--------------KTVMTEG-----------------NDG 509

Query: 516 NHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNL 575
                   +V + +N+AR  EQ+     A  +YR +L +  ++ DA +RL  +  A N  
Sbjct: 510 -------FRVLLTYNIARCKEQLGQLQEAEKMYRDVLQERPEFSDARVRLCLLELA-NPT 561

Query: 576 QLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATD----------G 625
             + + + + +  +G+     +  G        W  +K+  R A D              
Sbjct: 562 DATFKTIRQLMTNDGENLEVRAFFG--------WYLSKQKRRPAEDPELRHCSQTLRHWH 613

Query: 626 KDSYATLSLGNWNYFAA--LRNEKRAPKLEATHL-EKAKELYTRVIVQHTSNLYAANGAG 682
            D+Y+ + LGN     A  LR    A K++   L  KA + + + I    +N YAA G  
Sbjct: 614 DDTYSLVQLGNAYLRQARELRVASPADKVKRQKLFNKAIQSFDQAIKYDHNNAYAAQGIA 673

Query: 683 VVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLR 742
           + L    QF  +  + ++V+E       ++     IN+ +       +  A+++++  L 
Sbjct: 674 ITLVHAKQFSKAMLILSKVRET------IKDVTTLINIGNCLAELKQYHRAIEIFEQVLD 727

Query: 743 KFYYNTDAQILLYLARTHYEAEQWQDCKKSLL--------RAIHLAPSNYTLRFDAGVAM 794
           K        +L  L R   +  + +D   + L        RA+   P+N +L+F+   A 
Sbjct: 728 KTGETDGYNVLSSLGRVWLQRGR-EDKNPAFLRESLKYTQRALAQNPTNTSLQFN--TAF 784

Query: 795 QKFSASTLQKTR----RTADEVRSTVAELENAVRVFSHLSAASNLHLHGFD-EKKINTHV 849
            +F  S L +T+    RT  ++   + +L+ A++ F  L  +        D +++ N   
Sbjct: 785 VQFQLSELIRTQNENVRTVKDLEYAMEQLDEAIKTFDQLVESKTPPFPPADIQQRSNM-- 842

Query: 850 EYCKHLLDAAKIHREAAEREEQQNRQRQEAARQAALAEEARRKAEEQKKYLLEKRKLED 908
                   A    R   ER  QQ ++  +A   A L E   R+ EE+ + L E+  LE+
Sbjct: 843 --------AKNTTRRQLERAIQQQKE-TDALNNARLDEARHRREEEKARRLAEQAALEE 892


>gi|448117162|ref|XP_004203188.1| Piso0_000789 [Millerozyma farinosa CBS 7064]
 gi|359384056|emb|CCE78760.1| Piso0_000789 [Millerozyma farinosa CBS 7064]
          Length = 1092

 Score =  183 bits (465), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 247/1022 (24%), Positives = 441/1022 (43%), Gaps = 180/1022 (17%)

Query: 1   MACVYIPVQNSEEEVRVALD-QLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQF 59
           ++ + IP+ NS + V + LD +LP D+ ++++ LKAE  PL  W+ +A  Y ++G ++  
Sbjct: 19  LSILDIPL-NSGQIVSINLDDELPEDSKELINFLKAESCPLKYWIAVAIAYAQRGMLDGS 77

Query: 60  RQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNK 119
           ++++E   +  + ++  + + +   +L  + + Y   G       EK  +  LA Q  N+
Sbjct: 78  KEVVENALA--VSQFSNEDKIKIRVVLVWVHLKYASQG------IEKGNNLNLAQQGINE 129

Query: 120 ASRIDM--HEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGR 177
            S+      + S  + K  L L + +VEQ+   F  VL+++ +N  A+LG+A +  N+ +
Sbjct: 130 LSKAGSVSGDISYLLSKAVLHLYRDDVEQSLDTFDAVLKSNYNNCFAILGKAHIILNKTK 189

Query: 178 -YSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVA 236
            Y+++L+ Y++ L ++P      R+GIGLC + L     A +++QRAL++DP+N +A + 
Sbjct: 190 NYANALKLYQQVLILNPLMKPDPRIGIGLCFWFLKDEKMAIKSWQRALEIDPQNFKAKIL 249

Query: 237 LAVMDLQA------NEAAGIRKGMEKMQRAFEIY---PYCAMALNYLANHFFFTGQHFLV 287
           L + +         N+          + +   IY   P     L  LA+++F    + +V
Sbjct: 250 LNLAEFNTAFNYSLNDDDFKSNYQACLNQVVTIYYEAPNDISVLLTLASYYFSKENYDVV 309

Query: 288 EQLTETALAVTNHGPTK-----------------SHSYYNLARSYHSKGDYEKAGLYYMA 330
           ++L E  +   +                      S +   L R + +K D+ +A  Y+  
Sbjct: 310 QKLCEKVIGEVSESANSGKTSSSSKLSKFQSNVLSQTALWLGRVFFAKLDFIQAQKYFHE 369

Query: 331 SVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYV--- 387
           ++K +N+ +  +    GLG  Q+  G    A   FE +L+  P   E    LG +Y    
Sbjct: 370 AIK-LNENN--LLAKLGLGHSQINRGSTEEATITFESILKTNPKCSEVNYCLGMLYAKHK 426

Query: 388 -----QLG-QI-------------------EKAQELLRKAAKIDPRDAQAFIDLGELLIS 422
                +LG QI                   E++ ELL K    +P    A++ L  L  S
Sbjct: 427 SRRKQELGIQILERYIRLCNNRGLSDNKNEEESLELLNK----EPVILNAYLTLSRLYES 482

Query: 423 SDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLT 482
            D   +L+  K A    ++  ++VP+E+ NNIGV  F K  +  + ++FK +      L 
Sbjct: 483 RDINQSLNYLKKAIESRRQIKQDVPLEIYNNIGVFQFLKSNYSESSENFKKSYEK---LE 539

Query: 483 LLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTV 542
             DS T     D +  +L    M L                KVT+ FNL R  E I +  
Sbjct: 540 AADSFT-----DETGDVL----MDLKSDL------------KVTLSFNLGRSKE-ISEQS 577

Query: 543 AASVLYRLILFKYQDYVDAYLRL----AAIA-KARNNLQLSIELVNEALKVNGKYPNALS 597
            A  +Y  +L +   Y  A LRL      IA  A++ ++   E V E L ++       S
Sbjct: 578 EAIEIYNGLLKECPHYFSAKLRLLFLNCLIADSAKDKIK---EEVEEMLTISASDLEIRS 634

Query: 598 MLG--------DLELKNDDWVK-AKETFRAASDATDGKDSYATLSLGNWNYFAALRNEKR 648
             G         L +K DD  K  K+T        D  D YA LSL N  Y    R+ K 
Sbjct: 635 FYGWFSKNFGKKLGMKPDDDTKHQKDTLV----EYDSHDCYALLSLANI-YCIMARDIKG 689

Query: 649 APKLE--ATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAAS 706
           + + E    +  +A EL+++V+     N++ A G  +V  E  + +   +L  +++++ +
Sbjct: 690 SSQDEKKKKYYIRAIELFSKVLSVDPKNVFGAQGLAIVYIENKELNKGLELLRKIRDSLN 749

Query: 707 GSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQW 766
                    V++NL HV      FA +++ Y+  L ++    D +IL +L R  Y     
Sbjct: 750 D------ISVYLNLGHVMLELKQFAKSIEHYEIALMRYSNGNDPKILSFLGRAWYMRGMS 803

Query: 767 QD-----------CKKSLLRAIHLAPSNYTLRFDAGVAMQKFS----ASTLQKTRRTADE 811
           +            C+++L     L  S     F   +A  +F      + L   +R  ++
Sbjct: 804 EKNLSFMNTALSYCERALSLTTGLKSS-----FKFNIAYVQFQIAELVTKLPVEQRKVED 858

Query: 812 VRSTVAELENAVRVFSHLSAASNLH-------LHGFDEKKINTHVEYCKHLLDA------ 858
           ++  +  L+ A+   + L++    H       L        NT +      L+A      
Sbjct: 859 IKEAITNLQKAIESLNELASDEEKHPPYPKSDLKSRASLGTNTLLNRLNTCLEATIENVQ 918

Query: 859 -----------------AKIHREAAE-REEQQNRQRQEAARQAALAEEARRKAEEQKKYL 900
                            A+I RE  E R +Q+ R+ + A  +AAL E+A++ AEE +  +
Sbjct: 919 QSEQRMEEAKRLREEERARIQREEEEARAKQREREEELAKERAALQEQAKQWAEEARMNV 978

Query: 901 LE 902
           +E
Sbjct: 979 VE 980


>gi|345565881|gb|EGX48829.1| hypothetical protein AOL_s00079g468 [Arthrobotrys oligospora ATCC
           24927]
          Length = 1161

 Score =  180 bits (457), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 244/1012 (24%), Positives = 424/1012 (41%), Gaps = 152/1012 (15%)

Query: 12  EEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQILEEGS--SP 69
           E  V + L  LP D  ++  +L+ EQA    W++ A  Y K  KV+   +IL   +  S 
Sbjct: 30  EGTVEIDLTDLPDDVDELSSLLEQEQASHPYWILSALAYAKHRKVDNAIEILNSRALNSE 89

Query: 70  EIDEYYADVRYERIAIL--------NALGVYYTYLGKIETKQREKEEHFIL-ATQYYNKA 120
            I     ++   ++ +L         A+   Y      E+ +    +HF+  AT   N  
Sbjct: 90  NIKRNQKEILPIQLCLLWLYLQKTREAMKASYNQSEATESTK----DHFLQQATTLLNNI 145

Query: 121 SRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLE------------ADRDNVPALLGQ 168
            R +   P+  + +      K  V    +     LE            A+  N+ AL+G+
Sbjct: 146 GRYEADHPAYNIARAVYSSLKAAVTNVKAERATNLENAHRIYDEALKRANGSNMVALMGK 205

Query: 169 ACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDP 228
           A   F++ RY  +LE Y+  L+  P      R+GIGLC + L     A+ A++RAL+LDP
Sbjct: 206 ARWLFSKARYDKALECYQEILRKKPDMDPDPRIGIGLCFWMLNFKDDAKMAWERALELDP 265

Query: 229 ENVEALVALAVMDLQANEAAGI-----------RKGM-EKMQRAFEIYPYCAMALNYLAN 276
           ++  A + + +  L  N  +G+           +KGM E + +A+++    A+A    A 
Sbjct: 266 DSKVANLLVGIYYL--NFVSGLPESDPEFIKHYKKGMTEYIAKAYKLDKNMALACTLFAT 323

Query: 277 HFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEIN 336
           +FF  G     E L++ A+  T+       + Y L R Y   G+Y  +   Y+ S  E  
Sbjct: 324 YFFSVGNLATAESLSKKAIEFTDVPQVARDALYLLGRKYQEAGEYTLSRQSYVRS--ENA 381

Query: 337 KPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIY--------VQ 388
           K   ++    G GQ+ +   D+  A   FE +L+ +    E +  LG +Y         Q
Sbjct: 382 KEDTYLPSKLGTGQLMVLQKDYTGAKLAFEGILKTFNKCLEAMMVLGTLYAEEVFLAETQ 441

Query: 389 LGQI--EKAQE---------LLRKAAKIDPRDAQA----FIDLGELLISSDTGAALDAFK 433
            G I  EK +E          +R + K   ++ +      + L  L        +L   +
Sbjct: 442 SGVIRDEKTEERKKAISYLETVRSSWKDTKKNMKPSVSVLLTLARLYEVDSQDKSLACLQ 501

Query: 434 TARTLLKKAG-EEVPI---EVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTK 489
               L + A  EE P+   ++LNNI V ++  G+++ A +SF+ AL + + +   D    
Sbjct: 502 QVADLERAASTEEEPMLAPQLLNNIAVFNYNMGKWDEARESFQTALSNCVAMGAKDES-- 559

Query: 490 TYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYR 549
              +D  A +                          T+ +NLARL E   +T  A   Y 
Sbjct: 560 ---LDTDALV-------------------------TTLTYNLARLEEAAGNTDEAVKFYE 591

Query: 550 LILFKYQDYVDAYLRLAAIAKARNN------LQLSIELVNEALKVNGKYPNALSMLGDLE 603
            +L ++ DY +A +RLA IA  R        L+  ++  +  L+V   Y   LS      
Sbjct: 592 GLLVRHADYTEAAMRLAYIALRRGGEEGPKRLEELMKTEDHNLEVCALYGYYLSRRPKKS 651

Query: 604 LKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAA--LRNEKRAPKLEATHL-EKA 660
             N    K +  ++      D  D Y+   +GN +   A  +R +    K +   + E+A
Sbjct: 652 PLNIAEDKEQRHYKRTLTTHDKHDRYSLTGMGNLHLMTAREMRRDTDQDKEKKRKMYERA 711

Query: 661 KELYTRVIVQHTSNLYAANGAGVVLAE-KGQFDVSKDLFTQVQEAASGSVFVQMPDVWIN 719
            E + + +V    N YAA G  + + E K  +     +F +V+    G+  ++   V IN
Sbjct: 712 VEFFDKALVLDPKNAYAAQGVAIAMIEDKKDYSTGVGIFEKVK----GT--LKEASVHIN 765

Query: 720 LAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHY-------EAEQWQDCKKS 772
           L H +     F  A++ Y+  + ++  + D   +  LAR  Y          Q     + 
Sbjct: 766 LGHSFVEIKQFTRAIENYEIAINQYRADRDPWTITSLARAWYLKGKVEKSLPQLNTALEH 825

Query: 773 LLRAIHLAPSNYTLRFDAGVAMQKFS--ASTLQKTRRTADEVRSTVAELENAVRVFSHLS 830
             +A+ L+P +    F+      +       L K +RT+DE+++++  +E A++ FS ++
Sbjct: 826 SKKALSLSPDHPIFMFNVAYLQSQIGQVVHELPKHQRTSDEIKASLDGVEEAIKTFSAVA 885

Query: 831 AASNLHLHGFDEKKINTHVEYCKHLLDAAKIHRE-AAEREEQ------------QNRQRQ 877
            + N      D   I   V   K+      I R+ AA+ EEQ            + ++++
Sbjct: 886 KSKNPPYPASD---IEVRVTMNKNT-----IRRQLAADLEEQLKYEELHASKIAEAKRKR 937

Query: 878 EAARQAALAEEARRKAE--EQKKYLLEKRKLEDEQKR----LRQQEEHFQRV 923
           EA       E A+ +AE  E++K L E+R+L  EQ R     R++EE  + V
Sbjct: 938 EAEITKRAEEHAKLEAEKAEKQKRLAEERRLMQEQAREWQDKREEEERARMV 989


>gi|134084006|emb|CAK43077.1| unnamed protein product [Aspergillus niger]
          Length = 1199

 Score =  180 bits (456), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 256/1020 (25%), Positives = 431/1020 (42%), Gaps = 170/1020 (16%)

Query: 2   ACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQ 61
           + + IP    + EV V+L+ LP D +++  +L+ E+A  + W+ IA  Y KQ +++    
Sbjct: 33  SAIDIPASTLDSEVEVSLEILPDDPTELCTLLENEKAAKNFWVTIALAYAKQKQLDHAID 92

Query: 62  ILEEGSSPEIDEYYADVRYERIAIL------------NALGVYYTYLGKIETKQREKEEH 109
           IL +G    +         E++ +L            NA  V     G++ T+ + K+ +
Sbjct: 93  ILNKG----LASVAHGATKEKLGLLGWVCWLLMLKSRNAPRVAPE--GELYTEAKTKDHY 146

Query: 110 FILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-----------------VEQASSAFK 152
             LAT   N+ASR++   P  ++ +G L L +                   VE    A K
Sbjct: 147 LQLATSTLNEASRLNPAFPPLFLARGVLSLLRASLHPPRPVRPGTVDTSERVESLRQALK 206

Query: 153 IVLEADR----DNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGA-IRLGIGLCR 207
              E+ +     NV A+LG+A  ++  GRY+++LE Y++ L   PS      R+GIG C 
Sbjct: 207 CFDESSKAFGGRNVMAILGRARTQYLLGRYAEALEGYQKVLMKMPSLTDPDPRIGIGSCL 266

Query: 208 YKLGQLGKARQAFQRALQLDPENVEALVALAVMDL-------QANEAAG--IRKGMEK-M 257
           ++LG   +A+ A++RAL L+P++  A + LAV  L         + A G   +  M +  
Sbjct: 267 WQLGFKEQAKVAWERALALNPDSKVANILLAVYYLYDSSRHATTDPAFGSLYKVAMTQYT 326

Query: 258 QRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHS 317
           Q+AF+I     M  +    +F     +  VE L   A+  T+     S  +Y L R  H 
Sbjct: 327 QKAFKIDKEYPMTCSLFGGYFLLRKAYSTVETLARKAIEHTDVMQIASDGWYLLGRKSHY 386

Query: 318 KGDYEKAGLYYMASVKEINKPHEFIFP-YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNC 376
           +GD  +A  YY  S +      +   P  +G  Q+Q+   DF  A    EK+++    N 
Sbjct: 387 EGDLTRAAEYYNRSDQARGGGEKGYLPAKFGTVQMQVSNKDFDGAKFRLEKIIQ-QTKNA 445

Query: 377 ETLKALGHIYVQ--------------LGQIEKAQELLR--------KAAKIDPRDAQAFI 414
           E +  LG ++ +                +I+KA  LL         +  KI P D    +
Sbjct: 446 ECMVLLGALHAEEVFAAQRSGSKEDKSVEIKKAINLLESVRALWKDETKKISP-DESVLV 504

Query: 415 DLGELLISSDTGAALDAFKTARTL----LKKAGE-EVPIEVLNNIGVIHFEKGEFESAHQ 469
            L  L   S    ++        +    +K A    +P ++LNN+G   ++  + E A  
Sbjct: 505 YLARLYEQSAPEKSMQCLTQLEEMQLAEVKAALRVHLPPQLLNNMGCFLYQAEKIERART 564

Query: 470 SFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLF 529
            F+ AL        + SK K   +D  A +                          T+ F
Sbjct: 565 MFQAALD-----ACVRSKEKESELDTDALV-------------------------TTISF 594

Query: 530 NLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVN 589
           NL R  E       A  +Y+ +L ++ DY +A  RL  IA       L     +E  K  
Sbjct: 595 NLGRTYEAADMPEEAKKVYQGLLERHADYTEANARLTYIA-------LRQSPTDEGPKKM 647

Query: 590 GKYPNALSMLGDLELKND-DWVKAKETFRAASDATDGK--------------DSYATLSL 634
            K   A S   +LE++    W  +K   RAA+ A D +              D Y+   +
Sbjct: 648 AKLYEADST--NLEVRALFGWYLSKSKKRAANLAEDHEQRHYKHTLQYYDKHDRYSLTGM 705

Query: 635 GNWNYFAA--LRNEKRAPKLEATHL-EKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQF 691
           GN +   A  +R +    K +   + E+A E + + +     N YAA G  + L +  + 
Sbjct: 706 GNIHLSTARDMRRDSDQDKEKRRKMYERAVEFFDKALQLDPRNAYAAQGIAIALVDDKKD 765

Query: 692 DVSK-DLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDA 750
             S   +F+++++       ++   V++NL HVY     +  +++ Y+  L K     DA
Sbjct: 766 HASAVHIFSKIRDT------LRDASVYLNLGHVYAELRQYTRSIEHYEAALSKDRAR-DA 818

Query: 751 QIL-----LYLARTHYEAEQWQDCKKSL---LRAIHLAPSNYTLRFDAGVAMQKFSAST- 801
           QIL     ++LA+   E    Q  K +L    RA  +AP    L F+      + ++ T 
Sbjct: 819 QILACLGRVWLAKGKQEM-NLQAMKTALDYAQRAHSVAPGQVHLEFNVAFVQNQIASLTY 877

Query: 802 -LQKTRRTADEVRSTVAELENAVRVFSHLSAASN-LHLHGFDEKKINTHVEYCKHLLDAA 859
            L +T++T  +V+     L+ AV  F+ ++ A N  +     E++ N      K L  A 
Sbjct: 878 GLPETQKTVQDVQDAAEGLQQAVETFNRVAQAKNPPYPSSALEQRANMGRTILKQLERAL 937

Query: 860 KIHRE-----------AAEREEQQNRQRQEAARQAALAEEAR--RKAEEQKKYLLEKRKL 906
           +  +E           A E  E + RQR+E  R+A  AE  R  R AEE+++ + E ++L
Sbjct: 938 QSQKEYEEKNAAKLQQAREAREAEKRQREEEVRKAQEAERERKQRVAEERQRMIEEAQRL 997


>gi|19115532|ref|NP_594620.1| RNA polymerase II associated Paf1 complex subunit Tpr1
           [Schizosaccharomyces pombe 972h-]
 gi|26400735|sp|O42668.1|TPR1_SCHPO RecName: Full=Tetratricopeptide repeat protein 1
 gi|2664248|emb|CAA15833.1| RNA polymerase II associated Paf1 complex subunit Tpr1
           [Schizosaccharomyces pombe]
          Length = 1039

 Score =  180 bits (456), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 243/988 (24%), Positives = 421/988 (42%), Gaps = 138/988 (13%)

Query: 4   VYIPVQNSEEE-VRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQI 62
           + +P+   E++ V +    LP DA+++ +IL  EQAP + W   A EY+ +G  EQ   I
Sbjct: 14  IEVPLLGQEDQSVEIDCSSLPSDATELCEILVNEQAPREFWTKFAHEYYIRGLREQAILI 73

Query: 63  LEEGSSPEIDEYYADVRYERIAILNA-LGVYYTYLGKIETKQRE---KEEHFILATQYYN 118
           L+ G     D        E + ILNA +   Y  + +    +++   ++E       Y  
Sbjct: 74  LKSGLETLKDS-------ESLCILNANIAAIYLSMAREAMLKKDTDLRDEQLRNVRTYLE 126

Query: 119 KASRIDMHEPSTWVGKG--QLLLA---KGEVEQASSAFKIVLEADRDNVPALLGQACVEF 173
            A+ ID       +  G  ++LL    K  +E A+  F  VL+    N+   LG+A + +
Sbjct: 127 AANNIDSKSEINVLLHGIYRILLNPTDKESLENAARCFDFVLQKSGGNILGFLGKARILY 186

Query: 174 NRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPEN--V 231
            +G Y  +L+ Y+RAL  +P      R+GIGLC + L     A  A+ R  QLDP+N  V
Sbjct: 187 AKGNYRSALKLYQRALVSNPQFKPDPRIGIGLCFWNLDMKTDALSAWTRVQQLDPKNTVV 246

Query: 232 EALVALAVMDL---QANEAAGIR---KGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 285
           +  + L   DL     N  + ++   K ++ +QRAF+      +A + L  + +    + 
Sbjct: 247 DTYIGLYYYDLAFQNVNNDSFVQNYGKALQHIQRAFKTRNNDPVASSILERYVYSKKNYE 306

Query: 286 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 345
              +L E  +  +      +  YY + R+YH  G+ EKA   Y  + K  +  H  +   
Sbjct: 307 GCIKLAENVIQNSFSSSLIADGYYWMGRAYHQMGNNEKAMASYQKA-KAADDRH--LLSS 363

Query: 346 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQ--IEKAQELLRKAA 403
            G+GQ+Q+   D  SA   FE++ E      E L  LG ++    +  + KA+ LL +A 
Sbjct: 364 VGIGQIQILQNDLTSAKLTFERIAEQNQSCFEALVVLGCLHASDSKPDLTKARMLLDRAF 423

Query: 404 KID-----PR--DAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGV 456
            +      PR  D+  +I    L    DT  +L     A   L+ A   V  E+LNNI V
Sbjct: 424 NLVGSSKLPRVVDSDLYITQARLWEKEDTKKSLGFLTRALDFLESAHMSVGPELLNNIAV 483

Query: 457 IHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGN 516
           + +  G    AH       G+ I       K K+ + DA+  +    D            
Sbjct: 484 LQYHLGLIPEAH-------GNII-------KAKSVLPDANPELSLLLD------------ 517

Query: 517 HVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQ 576
                       +NLAR  E++ +T  AS  Y  IL K+  ++DA +R   +  +  N +
Sbjct: 518 ------------YNLARCEEELGNTSVASEAYVSILEKHPSFIDARIRKCLLQLSNPNEE 565

Query: 577 LSIELV------NEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYA 630
              E+       ++ L+V   +   LS      +++ +     +T R   D     D Y+
Sbjct: 566 TFKEIRHIMNADSQNLEVRAFFGWYLSKQKRRPVEDPEVRHCSQTLRHWHD-----DIYS 620

Query: 631 TLSLGNWNYFAA----LRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLA 686
            + LGN     A    + N++   K +  ++ KA + Y + I     N +AA G  ++LA
Sbjct: 621 LVQLGNAYMRQAREFRVHNDREKLKRQKLYI-KAIQSYDQAIKFDPKNAHAAQGIAIILA 679

Query: 687 EKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYY 746
           +  QF  +  + ++V+EA   +  +      IN+ +       F+ A+++++        
Sbjct: 680 QNRQFSKALLILSKVREAIKDATTL------INIGNCLAELKQFSRAIEVFETVYSSTGE 733

Query: 747 NTDAQILLYLARTHYEAEQWQ---DCKKSLLRAIHLA----PSNYTLRFDAGVAMQKFSA 799
           +    +L  L R   +  +     D  K  +R   LA    P N +L F+  VA  +F  
Sbjct: 734 SDTYGVLSCLGRVWLQRGRESKNVDYLKESVRYATLALEKNPENPSLLFN--VAFVQFQL 791

Query: 800 STLQKTR----RTADEVRSTVAELENAVRVFSHLSA-----------------ASNLHLH 838
             L + +    RT +++   + +L+ ++  F+ L +                 A N    
Sbjct: 792 CELIRQKPENSRTVEDLNFAMQQLDASIETFTKLVSVEHPPYSPTSIEQRAKMAKNTTKR 851

Query: 839 GFDEKKINTHVEYCKHL---LDAAKIHREAAE-----REEQQNRQRQEAARQAALAEEAR 890
              E+ I   +EY K +   L+ A+I RE  +      EE   +++QE  RQ  L EE +
Sbjct: 852 QL-ERAIQAQIEYEKSVAAKLEDARIQREKEKARRLAEEEALLKEKQERERQ--LQEERQ 908

Query: 891 RKAEEQKKYLLEKRKLEDEQKRLRQQEE 918
           +  EE  ++   ++K  ++   L   EE
Sbjct: 909 KMQEEVLEWRKSQQKASEDDMSLSDDEE 936


>gi|170093251|ref|XP_001877847.1| RNA polymerase II-associated protein [Laccaria bicolor S238N-H82]
 gi|164647706|gb|EDR11950.1| RNA polymerase II-associated protein [Laccaria bicolor S238N-H82]
          Length = 1095

 Score =  179 bits (455), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 239/1044 (22%), Positives = 424/1044 (40%), Gaps = 204/1044 (19%)

Query: 12  EEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQILEEGSSPEI 71
           +E + + LD L  +  D+LD+LK  Q  + +W+ +A EY+++G +E   +I         
Sbjct: 18  QEVITIDLDNLDPNPEDVLDLLKEGQCTVYVWMKLAGEYWRRGYLEAAEKIA-------- 69

Query: 72  DEYYADVRYERIAILNALGVYYTYLGKIET--------------------KQREKEEHFI 111
             Y A   ++   + N+L   Y  L  I+                      ++ KE+++ 
Sbjct: 70  --YCAIESFQSSGLTNSLHPIYALLANIQIAYARKAPKLVLADARQDVMKDEKSKEDYYR 127

Query: 112 LATQYYNKASRIDMHEPSTWVG------KGQLLLAKGEVEQASSAFKIVLEADRDNVPAL 165
            A Q+ N   R          G      +G   LA   ++ A  +F+ VL     N+ AL
Sbjct: 128 EAAQFLNTGERFGAESGEGVSGTLAFLTRGIQQLATRSMDDALRSFEGVLVEKPTNLVAL 187

Query: 166 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 225
           LG+A + + +  Y ++L  ++  L+ +P C    R+GIGLC + +    KA+ A+QR+L+
Sbjct: 188 LGKARILYAKRNYREALRLFQDVLKYNPQCIPDPRVGIGLCLWAMDHKAKAKAAWQRSLE 247

Query: 226 LDPENVEALVALAVMDLQANEAAGIRK---------GMEKMQRAFEIYPYCAMALNYLAN 276
           ++P    A + L +  + ++++  + +         G + +++AF+     A A N L  
Sbjct: 248 VNPSEWAAQLLLGLESINSSKSEHLTEAEKTHTFLSGTKMIEKAFKANQRSAAAANALCE 307

Query: 277 HFFFTGQHFLVE------------------QLTETALAVTNHGPTKSHSYYNLARSYHSK 318
            F   G H  V                   +L E  +   +     +  Y   AR  H++
Sbjct: 308 LFLRKGDHQRVNLSSFPVVLGWLTLIDEALKLAERTIQFADTLTLLTEGYLRAARVSHAE 367

Query: 319 GDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCET 378
           G Y +A  +Y A+ +   +P + I    G+ Q+Q++  +  +A+   + +L+  P+   +
Sbjct: 368 GSYAQATKFYTAAGE--GQP-KHIIGAIGMAQMQMQNDEMAAAIHTLDTLLQA-PNPQRS 423

Query: 379 LKAL-------GHIYVQLGQIEKAQELLR---------KAAKI-DPRDAQAFIDLGELLI 421
           L+A         H    +   + AQE LR         K  +I D R           LI
Sbjct: 424 LEATVMLASLRAHPRPGVSSSDVAQERLRARELFDRVCKGLEIEDARANGKASSRSSRLI 483

Query: 422 SSDT-----------GAALD----AFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFES 466
           S D            G +LD    A K A  + +  GE  P  ++NN+G ++  +G F  
Sbjct: 484 SDDVDMHVEIARLWQGESLDRMGRALKEALRISEATGEPDP-RLMNNLGALYHLEGNFSE 542

Query: 467 AHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVT 526
           A   ++ AL           +T     D S +M                          +
Sbjct: 543 ARSLYESAL----------IRTSKLTSDVSEAM------------------------STS 568

Query: 527 VLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEAL 586
           +L+NLAR+ E   +   A   Y  +L ++ +YVDA +R A +    N    + EL+ ++L
Sbjct: 569 ILYNLARVYEDEGEESLAKDAYEKLLSRHPEYVDAKIRQAKMLSNLNRNNDAHELLKQSL 628

Query: 587 KVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRNE 646
                  N  +      ++ +    AKE   A     D  D Y+  + G W  +   R  
Sbjct: 629 SSQNHNLNLRAFYTYFLIQTNLPRPAKEIVFATLKDHDKHDIYSLCAAG-WIMYHQSRES 687

Query: 647 K----RAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEK------GQFDVSK- 695
           +    +  +      ++  E Y + +       +AA G  +V AE       G F     
Sbjct: 688 RDTSTKGVEERKRGFQRTAEFYEKALQLDPMCAFAAQGLAIVTAEDALGSLGGAFGPDDH 747

Query: 696 -----------DLFTQVQEAA-SGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRK 743
                      D+F +V+E+   GSV+        N+ H Y+A+  F  A++ Y+    +
Sbjct: 748 LKRMTNSRDALDIFAKVRESMHDGSVY-------FNMGHCYYARDEFDRAIESYETASTR 800

Query: 744 FYYNTDAQILLYLARTHY---EAEQWQDCKKSLLR----AIHLAPSNYTLRFDAGVAMQK 796
           FY   +  +LL L R+ Y     +Q      + LR    A+HL P++    ++  +  QK
Sbjct: 801 FYGGHNVPVLLCLCRSWYAKATKDQNPSAMNTALRYAQAALHLQPNDKATIYNIAMIQQK 860

Query: 797 -----FSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGFDEKKINTHVEY 851
                FS S     +RT  +++  +A+  +A ++F+ L A     +  +     +   +Y
Sbjct: 861 SAEMMFSTSP---AKRTLKDLQRVIAQAAHAQKLFASL-AGDKAQMVPYSRDIADQRRKY 916

Query: 852 CKHLLDAAKIHREAAEREEQQNRQRQ-EAARQAALAEEARRKAEEQKKYL---------- 900
             ++L     H E         +QRQ EA  QA L EEARRK +E+K  L          
Sbjct: 917 GDNMLRKGDEHLE---------KQRQFEADTQAKL-EEARRKRQEEKDRLEDLERARMET 966

Query: 901 --LEKRKLEDEQKRLRQQEEHFQR 922
             +E  KL +E++  R+Q   + R
Sbjct: 967 LRVEAEKLAEERRLAREQAMEWTR 990


>gi|336372060|gb|EGO00400.1| hypothetical protein SERLA73DRAFT_122419 [Serpula lacrymans var.
           lacrymans S7.3]
 gi|336384811|gb|EGO25959.1| hypothetical protein SERLADRAFT_369311 [Serpula lacrymans var.
           lacrymans S7.9]
          Length = 1089

 Score =  179 bits (454), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 226/1003 (22%), Positives = 431/1003 (42%), Gaps = 157/1003 (15%)

Query: 12  EEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQILEEG----- 66
           +E + + LD L  +  D++++LK  Q  + +W  +A EY+++G +E   +I +       
Sbjct: 19  QEVITIDLDNLDTNPDDVIELLKDGQCKVWVWTKLAGEYWRRGYLEAAEKIAQSAIDCFH 78

Query: 67  ------SSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKA 120
                 SSP I    A+++  R      L +      ++ + +R KEE++  A QY N  
Sbjct: 79  VNGAIASSPPIYSLLANIQIARARKAPKLIIPSAREDRL-SNERPKEEYYKEAAQYLNSG 137

Query: 121 SRIDMHEPSTWVGKGQLLLAKG-------EVEQASSAFKIVLEADRDNVPALLGQACVEF 173
            R    E    VG     L +G        ++ A  +F+ VL     N+ ALLG+A + +
Sbjct: 138 ERA-AAESGEGVGGTLAFLTRGIQQLATRSMDDALRSFEGVLAEKPTNLIALLGKARILY 196

Query: 174 NRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEA 233
            R  Y  +L+ +++ LQ+ P C    R+GIGLC + +    KA+ A+QR+L+++P    A
Sbjct: 197 ARRGYPQALKLFQQVLQLSPQCQPDPRIGIGLCLWAMDHKAKAKAAWQRSLEVNPSEWSA 256

Query: 234 LVALAVMDLQANEAAGIRK---------GMEKMQRAFEIYPYCAMALNYLANHFFFTGQH 284
           L+ L +  + A++A    +         G + ++RAF      A A N L   F   G +
Sbjct: 257 LLLLGLESINASKAENQSEEEKAHLFLTGTKMIERAFNANQKSAAAANALCELFLRKGNY 316

Query: 285 FLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFP 344
               +L E  +   +     +  Y   AR  H++G   +A  YY ++ +   +P + +  
Sbjct: 317 KRALKLAERTVQFADTLTVLTEGYLRAARVLHAEGSISEATKYYTSATE--GQP-KHVLG 373

Query: 345 YYGLGQVQLKLGDFRSALTNFEKVLEI-----YPDNCETLKAL-GHIYVQLGQIEKAQEL 398
             GL Q+Q++  +  +A+   + +L+       P+    L +L  H    +   +  QE 
Sbjct: 374 AIGLAQMQIQNDEAAAAIHTLDTLLQPPNPQRSPEATVMLASLRSHPRPGISTDDMVQEK 433

Query: 399 LR-------------------KAAKIDPRDAQAFID-------LGELLISSDTGAALDAF 432
           ++                     AK   R ++  +D       + +L    +      + 
Sbjct: 434 IKARELYDRVIKSLEDDNRIHDRAKEPSRTSRRILDDMDMHAEIAKLWQEENLDRTGKSL 493

Query: 433 KTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYV 492
           + A  + +  G+  P  +LNN+G +    G+ + A   ++ AL                 
Sbjct: 494 REALRISEATGQTDP-RLLNNLGALQHLDGDLDQARTMYESAL----------------- 535

Query: 493 IDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLIL 552
              +AS L              G+ +    +  ++L+NLAR+ E+  D   AS  Y  +L
Sbjct: 536 --TTASAL--------------GSELGEGMS-TSILYNLARVYEEKGDDTMASEAYDKLL 578

Query: 553 FKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKA 612
            ++ +Y DA +R A +    N+   + EL+ +AL       N  +      ++++    A
Sbjct: 579 TRHPEYADAKIRQAQMLANLNHPNEAHELLKQALSSQNSNLNLRAFYTYFLIQSNLPKPA 638

Query: 613 KETFRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPK-LEATH--LEKAKELYTRVIV 669
           K+   A     D  D Y+  + G   Y  +  +   +PK LE      +++ E Y + + 
Sbjct: 639 KDFVFATLKDHDKYDVYSLCAAGWIMYHQSRESRDASPKGLEERRRGFQRSAEFYEKALQ 698

Query: 670 QHTSNLYAANGAGVVLAE-----------------KGQFDVSK---DLFTQVQEAAS-GS 708
              +   AA G  +V AE                 + +F  ++   D+F +V+E+ + GS
Sbjct: 699 YDPNCAVAAQGLAIVTAEDSLGSFSAPSSSSTDEAQKRFKNARDALDVFAKVRESLNDGS 758

Query: 709 VFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHY----EAE 764
           V+V       N+ H Y+A+  F  A++ Y+    +FY   +  +LL L R+ Y    + +
Sbjct: 759 VYV-------NMGHCYYARDEFDRAVESYETASSRFYSGHNVSVLLCLCRSWYAKANKDQ 811

Query: 765 QWQDCKKSLL---RAIHLAPSNYTLRFDAGVAMQKFSAS--TLQKTRRTADEVRSTVAEL 819
            +    K+L     A+H+ P++  + ++  +  QK +     +   +R+  ++   +A+ 
Sbjct: 812 SFTSMNKALKFAEMALHIQPNDKAIVYNIAMIQQKAAELLFGITPAKRSLKDLERAIAQA 871

Query: 820 ENAVRVFSHLSAASNL----------HLHGFDE---KKINTHVEYCKHLLDAAKIHREAA 866
            +A R+F+ L+A              H   + E   ++ + H+   KH    A    EAA
Sbjct: 872 GHAQRLFASLAADPAPVVPYSREMADHRRKYGESMLRRGDEHLSAQKHFEAEAHAKLEAA 931

Query: 867 EREEQQNRQRQEAARQAALAEEARRKAEEQKKYLLEKRKLEDE 909
            ++  + ++RQEA  + A  EE R++AE+    L E+R++  E
Sbjct: 932 RQKRLEEKRRQEAT-ELARVEELRQQAEK----LAEERRIARE 969


>gi|159467375|ref|XP_001691867.1| Paf1 complex component [Chlamydomonas reinhardtii]
 gi|158278594|gb|EDP04357.1| Paf1 complex component [Chlamydomonas reinhardtii]
          Length = 973

 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 125/385 (32%), Positives = 205/385 (53%), Gaps = 15/385 (3%)

Query: 543 AASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDL 602
           AA+ LY+ +L ++  Y+D YLRLA IA+A+ N + ++E    AL   G + +AL+++  L
Sbjct: 535 AAAALYKEVLSEHPTYIDCYLRLACIARAKGNHKEALEFAQSALDKEGGHADALALMSQL 594

Query: 603 ELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYFAAL--RNEKRAPKLEATHLEK 659
            ++  D+  A +T  +   D+   +D+Y  +   N   + A   R E +  K EA    K
Sbjct: 595 YMERRDYEAAGKTLIQLIQDSGSKRDTYGRIGYANTYLYTAPKDRKEDQLRKAEA-RFSK 653

Query: 660 AKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEA-ASGSVFVQMPDVWI 718
           A + Y  V+     N++AANG G  LAE G  D ++ +F++V  + A    F+ +PDV I
Sbjct: 654 ALDEYRAVLDADPRNVWAANGCGAALAELGYLDAAQSVFSEVYASMALSDGFLTIPDVLI 713

Query: 719 NLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIH 778
           NLA+   A+ ++  A+ +Y+  L K  +    Q+LLYLAR  Y++ +  + +  L RAIH
Sbjct: 714 NLANCNLARCDYQDAVHLYRTALDKLEHKHHPQVLLYLARALYDSNKLTEAQSCLKRAIH 773

Query: 779 LAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEV------RSTVAELENAVRVFSHLSAA 832
           LAP++Y LRF+  + +Q+++  T +K R   D        R+ V  L+ A R + HL   
Sbjct: 774 LAPTDYKLRFNYALTLQEWAVRTFRKERVAGDPTKLPDFQRAEVL-LKEAHRHYEHLKVL 832

Query: 833 SNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEAARQAALAEEARRK 892
                 G D+ K+N HV +C   L   +   +AA +E+ + R R+    +   A EA R+
Sbjct: 833 GR-ERSGLDDVKLNAHVSFCAAQLQKTQDLIDAAAKEDYEARLRRHEQIKIREAAEADRQ 891

Query: 893 AEEQKKY--LLEKRKLEDEQKRLRQ 915
           AEE ++   + E R+  DE  R  Q
Sbjct: 892 AEELRRQAEVDEARRRRDELARAAQ 916



 Score =  109 bits (273), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 114/444 (25%), Positives = 183/444 (41%), Gaps = 51/444 (11%)

Query: 51  FKQGKVEQFRQILEEGSSPE----IDEYYAD-VRYERIAILNALGVYYTYLGKIETKQRE 105
              G+++ F  I E  +S E    ++ Y+     YERI    A         + E +   
Sbjct: 120 LAHGRLDAFDHIYETATSEETAVEVERYFGQKPTYERIQFFTARAAILIAQFRDEKQADA 179

Query: 106 KEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPAL 165
           K      A +    AS +D +E    +  G   +A+G++ QA+  ++    A  +  P +
Sbjct: 180 KALLLSEAKKLITTASSLDPNEQLVLLTSGLHHMARGDLTQAARDWERAASAKNNGRPNV 239

Query: 166 LGQ---ACVEFNRGRYSDSLEFYKRALQ--VHPSCPGAIRLGIGLCRYKLGQLGKARQAF 220
           +G    A + + +  Y  +L+ Y+ AL+    P CP  +RLGI    +KLG L  A+ A+
Sbjct: 240 VGHLALAGLHYQQQHYKKALQHYRTALREFPGPGCPAEVRLGIAAASFKLGDLATAKAAY 299

Query: 221 QRALQLDPE-NVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFF 279
           +R L LDP+     L    +    AN   G+   +  +  A+++ P     L +LA++  
Sbjct: 300 KRVLALDPDCADAYLGLALLAASDANVQQGLADCLRHLLTAYQLQPGHVGVLTHLAHYCL 359

Query: 280 FTGQHFLVEQLTETALAVTNHGP------TKSHSYYNLARSYHSKGDYEKA-GLYYMASV 332
             GQ    E L   AL      P       ++ +   LAR+YH++G  ++A   Y  A  
Sbjct: 360 LMGQPERGEVLARAALEGAEALPGSASEGVRAEAMTLLARAYHAQGRMDEARAEYGRACA 419

Query: 333 KEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQI 392
            +   P     P  G+ Q+    G   +A T  E          E LKA    Y      
Sbjct: 420 LDKRSP----LPRLGMAQMYCGAGQLINAATELE----------EALKAAPAFY------ 459

Query: 393 EKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLN 452
               + L++A    P DA+ +  LGELL  SD          A   +      VP  +LN
Sbjct: 460 ----DALKEATGKQPGDAELWEMLGELLAPSD---------PADEDVPLPDHVVPTRLLN 506

Query: 453 NIGVIHFEKGEFESAHQSFKDALG 476
           N  V+H+  GE  +A    + A G
Sbjct: 507 NAAVLHYRAGEVATALALLQRAAG 530


>gi|350634082|gb|EHA22446.1| hypothetical protein ASPNIDRAFT_128938 [Aspergillus niger ATCC 1015]
          Length = 1457

 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 254/1036 (24%), Positives = 428/1036 (41%), Gaps = 187/1036 (18%)

Query: 2    ACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQ 61
            + + IP    + EV V+L+ LP D +++  +L+ E+A  + W+ IA  Y KQ +++    
Sbjct: 477  SAIDIPASTLDSEVEVSLEILPDDPTELCTLLENEKAAKNFWVTIALAYAKQKQLDHAID 536

Query: 62   ILEEGSSPEIDEYYADVRYERIAILNALGVYYTYL--------------GKIETKQREKE 107
            IL +G    +         E++ +L     +  +L              G++ T+ + K+
Sbjct: 537  ILNKG----LASVAHGATKEKLGLLG----WVCWLLMLKSRNAPRVAPEGELYTEAKTKD 588

Query: 108  EHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-----------------VEQASSA 150
             +  LAT   N+ASR++   P  ++ +G L L +                   VE    A
Sbjct: 589  HYLQLATSTLNEASRLNPAFPPLFLARGVLSLLRASLHPPRPVRPGTVDTSERVESLRQA 648

Query: 151  FKIVLEADR----DNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGA-IRLGIGL 205
             K   E+ +     NV A+LG+A  ++  GRY+++LE Y++ L   PS      R+GIG 
Sbjct: 649  LKCFDESSKAFGGRNVMAILGRARTQYLLGRYAEALEGYQKVLMKMPSLTDPDPRIGIGS 708

Query: 206  CRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDL-------QANEAAG--IRKGMEK 256
            C ++LG   +A+ A++RAL L+P++  A + LAV  L         + A G   +  M +
Sbjct: 709  CLWQLGFKEQAKVAWERALALNPDSKVANILLAVYYLYDSSRHATTDPAFGSLYKVAMTQ 768

Query: 257  -MQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSY 315
              Q+AF+I     M  +    +F     +  VE L   A+  T+     S  +Y L R  
Sbjct: 769  YTQKAFKIDKEYPMTCSLFGGYFLLRKAYSTVETLARKAIEHTDVMQIASDGWYLLGRKS 828

Query: 316  HSKGDYEKAGLYYMASVKEINKPHEFIFP-YYGLGQVQLKLGDFRSALTNFEKVLEIYPD 374
            H +GD  +A  YY  S +      +   P  +G  Q+Q+   DF  A    EK+++    
Sbjct: 829  HYEGDLTRAAEYYNRSDQARGGGEKGYLPAKFGTVQMQVSNKDFDGAKFRLEKIIQ-QTK 887

Query: 375  NCETLKALGHIYVQ--------------LGQIEKAQELLR--------KAAKIDPRDAQA 412
            N E +  LG ++ +                +I+KA  LL         +  KI P D   
Sbjct: 888  NAECMVLLGALHAEEVFAAQRSGSKEDKSVEIKKAINLLESVRALWKDETKKISP-DESV 946

Query: 413  FIDLGELLISSDTGAALDAFKTARTL-LKKAGEE-------------------VPIEVLN 452
             + L  L   S    ++        + L +  EE                   +P ++LN
Sbjct: 947  LVYLARLYEQSAPEKSMQCLTQLEEMQLAEVAEEERPEGVEDEEQVKAALRVHLPPQLLN 1006

Query: 453  NIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFE 512
            N+G   ++  + E A   F+ AL        + SK K   +D  A +             
Sbjct: 1007 NMGCFLYQAEKIERARTMFQAALD-----ACVRSKEKESELDTDALV------------- 1048

Query: 513  NDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKAR 572
                         T+ FNL R  E       A  +Y+ +L ++ DY +A  RL  IA   
Sbjct: 1049 ------------TTISFNLGRTYEAADMPEEAKKVYQGLLERHADYTEANARLTYIA--- 1093

Query: 573  NNLQLSIELVNEALKVNGKYPNALSMLGDLELKN-DDWVKAKETFRAASDATDGK----- 626
                L     +E  K   K   A S   +LE++    W  +K   RAA+ A D +     
Sbjct: 1094 ----LRQSPTDEGPKKMAKLYEADST--NLEVRALFGWYLSKSKKRAANLAEDHEQRHYK 1147

Query: 627  ---------DSYATLSLGNWNYFAA--LRNEKRAPKLEATHL-EKAKELYTRVIVQHTSN 674
                     D Y+   +GN +   A  +R +    K +   + E+A E + + +     N
Sbjct: 1148 HTLQYYDKHDRYSLTGMGNIHLSTARDMRRDSDQDKEKRRKMYERAVEFFDKALQLDPRN 1207

Query: 675  LYAANGAGVVLAEKGQFDVSK-DLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALA 733
             YAA G  + L +  +   S   +F+++++    +       V++NL HVY     +  +
Sbjct: 1208 AYAAQGIAIALVDDKKDHASAVHIFSKIRDTLRDA------SVYLNLGHVYAELRQYTRS 1261

Query: 734  MKMYQNCLRKFYYNTDAQILLYLARTHY----EAEQWQDCKKSL---LRAIHLAPSNYTL 786
            ++ Y+  L K     DAQIL  L R       +    Q  K +L    RA  +AP    L
Sbjct: 1262 IEHYEAALSKDRAR-DAQILACLGRVWLAKGKQEMNLQAMKTALDYAQRAHSVAPGQVHL 1320

Query: 787  RFDAGVAMQKFSAST--LQKTRRTADEVRSTVAELENAVRVFSHLSAASN-LHLHGFDEK 843
             F+      + ++ T  L +T++T  +V+     L+ AV  F+ ++ A N  +     E+
Sbjct: 1321 EFNVAFVQNQIASLTYGLPETQKTVQDVQDAAEGLQQAVETFNRVAQAKNPPYPSSALEQ 1380

Query: 844  KINTHVEYCKHLLDAAKIHRE-----------AAEREEQQNRQRQEAARQAALAEEAR-- 890
            + N      K L  A +  +E           A E  E + RQR+E  R+A  AE  R  
Sbjct: 1381 RANMGRTILKQLERALQSQKEYEEKNAAKLQQAREAREAEKRQREEEVRKAQEAERERKQ 1440

Query: 891  RKAEEQKKYLLEKRKL 906
            R AEE+++ + E ++L
Sbjct: 1441 RVAEERQRMIEEAQRL 1456


>gi|452840938|gb|EME42875.1| hypothetical protein DOTSEDRAFT_153030 [Dothistroma septosporum
           NZE10]
          Length = 1194

 Score =  178 bits (451), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 256/1035 (24%), Positives = 439/1035 (42%), Gaps = 186/1035 (17%)

Query: 3   CVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQI 62
            + IPV    E V + L+++  + S++ D+L++E A  + W+ IA  + KQ K +    I
Sbjct: 30  VIEIPVGADGEVVDLNLEEITDEPSELCDLLESENAARNYWITIALAHVKQDKSDAAVDI 89

Query: 63  LEEGSSPEIDEYYADVRYERIAILNALGVYYTY----LGKIETKQ------REKEEHFIL 112
           L+      +D        ER++IL  L   Y +      ++++ Q      R K+     
Sbjct: 90  LKRA----LDVRQQGRSDERLSILVCLCWLYLWKCRKASRVQSTQDTTRDDRTKDHWLKA 145

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVE-----------QASSAFKIVLEADR-D 160
           AT   N ASR++   P   + +G L + +  ++           QAS  F    ++    
Sbjct: 146 ATSTLNDASRLNPSYPPLILVRGTLNILRASLQQAQHERTDSLKQASKNFDDAYKSSSAK 205

Query: 161 NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAI----RLGIGLCRYKLGQLGKA 216
           NV A++G+A  +++ G+Y+++   Y++ L+     PG I    R+GIG C ++LG    A
Sbjct: 206 NVMAVMGKAKAQYSLGKYAEAYALYQQVLE---RAPGMIDPDPRIGIGCCLWQLGHKENA 262

Query: 217 RQAFQRALQLDPENVEALVALAV--MD----LQANEAAGIRKGMEKM----QRAFEIYPY 266
           ++A++RAL L+ ++  A + L +  +D    L  ++   ++   + M    Q AF+   +
Sbjct: 263 KEAWERALVLNEDSSVANIMLGLHYLDESNHLSTSDPEFVKIYTKAMTGYTQTAFKKNGW 322

Query: 267 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGL 326
            A+A       F     +  VE+L   A+  T+     S  +Y LAR  H +GD  KA  
Sbjct: 323 NALACVTFGGFFLLRKNYANVERLARRAIEQTDLNAIASDGWYLLARMEHYQGDLAKAQD 382

Query: 327 YY-MASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 385
           +Y  A          F+   +G+ Q++  + DF  A    EK++     + E +  LG +
Sbjct: 383 FYGKADQARGGDERGFLPAKFGVAQLKTLMQDFDGAKFRLEKII-TASKSVEAMTLLGIL 441

Query: 386 YVQ-------LGQIEKAQELLRKAA---------------KIDPRDAQAFIDLGELLISS 423
           + +        G  E   +  +KA                KI P D    ++L  L  S 
Sbjct: 442 HAEDVFAAQANGSKEDKSDSRKKAIALLEQVRIAWKDAKRKITP-DHSVLLNLARLYESD 500

Query: 424 DTGAALDAFKTARTL-LKKAGE-EVPIE------------------VLNNIGVIHFEKGE 463
               AL   +    + L +  E ++P E                  +LNNIG  +F   +
Sbjct: 501 QPEKALACLQQVEQMELDEISEDDLPEELDDEDAIREAKRSMLSPQLLNNIGCFYFHADK 560

Query: 464 FESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWN 523
              A   F+ AL   + +   D    T   DA  S                         
Sbjct: 561 HTIARAYFQSALNSSVSIQHKDESVDT---DALVS------------------------- 592

Query: 524 KVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVN 583
             TV +NLAR  E       A  +Y  +L ++ DY+DA  R+A +A     LQ   E   
Sbjct: 593 --TVSYNLARTYEAEGVEKEAQKVYNGLLTRHPDYIDANTRMAFLA-----LQTEPEKGA 645

Query: 584 EALK--------------VNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSY 629
           +A+K              ++G Y N       L+L +D   + +  ++      D  D Y
Sbjct: 646 QAIKTLLDADPSNLEIRALHGWYLNKHKKRT-LQLSDD---QEQRHYKHTLMTYDKHDIY 701

Query: 630 ATLSLGNWNYFAALRNEKRAPKLEATHLE-------KAKELYTRVIVQHTSNLYAANGAG 682
           +   +GN N   A    +  P+    H E       +A E + +V++    N YAA G G
Sbjct: 702 SLTGMGNLNMAVA----RELPRDTDQHKERRTKTYMRAVEFFDKVLLLDPKNAYAAQGMG 757

Query: 683 VVLAE-KGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCL 741
           + +AE K     +  +FTQV+E+      ++   V +NL HV+     ++ +++ Y+  L
Sbjct: 758 IAMAEDKKDTSAAVKIFTQVRES------IKDASVHVNLGHVFCELKQYSKSIENYELAL 811

Query: 742 RKFYYNTDAQILLYLART---HYEAEQWQDCKKSLL----RAIHLAPSNYTLRFDAG--- 791
           +K     D QI+  L R       AE+  D  +  L    +A+ +AP N   RF+     
Sbjct: 812 QK-SKQKDPQIMACLGRAWLLRGRAERNLDYFQMSLDLSKQALEVAPDNTNFRFNVAFAQ 870

Query: 792 --VAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLS-AASNLHLHGFDEKKINTH 848
             VA Q  S     KT +   +V  +  +L+ A+  F  ++ + S     G  E++ N  
Sbjct: 871 FQVAQQMISQPEANKTSK---DVEQSSKDLDTAIESFIEIAKSPSPPFPRGDIEQRANMG 927

Query: 849 VEYCKHLLDAAKIHREAAEREEQQNRQRQEAARQAALAEEARRKAEEQKKYLLE-----K 903
               K  L A+ I R+A    E++N  R E AR+    EE  RK E++K+  LE     K
Sbjct: 928 RNTMKRQL-ASAIERQA--EYERKNATRIEEARKT--REEEMRKREDEKRAALEKAEEQK 982

Query: 904 RKLEDEQKRLRQQEE 918
           RK+ DE++R++++++
Sbjct: 983 RKILDERRRMKEEDD 997


>gi|302853740|ref|XP_002958383.1| hypothetical protein VOLCADRAFT_121713 [Volvox carteri f.
           nagariensis]
 gi|300256263|gb|EFJ40533.1| hypothetical protein VOLCADRAFT_121713 [Volvox carteri f.
           nagariensis]
          Length = 1179

 Score =  178 bits (451), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 130/441 (29%), Positives = 213/441 (48%), Gaps = 43/441 (9%)

Query: 446 VPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDM 505
           +P  +LNN  V+H+ + E                              D S++M   +  
Sbjct: 501 IPARLLNNAAVLHYRQVE----------------------------AGDVSSAMALLRRA 532

Query: 506 Q-LFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLR 564
           Q    R  +    V    +  T+ FN ARL+E   +  AA+ LY+ +L ++  Y+D YLR
Sbjct: 533 QDAMSRGADGCGGVSSHMHLATLTFNRARLMEASGEYKAAAQLYKDVLSEHGTYIDCYLR 592

Query: 565 LAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAASDAT 623
           LA IA+A+ + + ++     AL V G + +AL+++  L ++  D+  A  T  +   D  
Sbjct: 593 LACIARAKGSHKEALRYAQSALDVEGGHADALALMSQLHMERRDYEAAGRTLIQLLQDDG 652

Query: 624 DGKDSYATLSLGNWNYFAALRN--EKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGA 681
             +D Y  +   N   + A R+  E  A K EA    KA + Y  V+     N++AANG 
Sbjct: 653 SKRDVYGRIGYANTYLYTAPRDRREDSAKKAEA-RFSKALDEYRSVLEADPRNVWAANGC 711

Query: 682 GVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCL 741
           G  LAE G  D ++ ++  +   A    F+ +PDV INLA+V+ A+ ++  A+ +Y+  L
Sbjct: 712 GAALAELGYLDAAQ-VYASM---ALSDGFLTIPDVLINLANVHLARCDYQDAVHLYRTAL 767

Query: 742 RKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSAST 801
            K  +    Q+LLYLAR  Y++ +  + +  L RAIHLAP++Y LRF+  + MQ+++  +
Sbjct: 768 DKLEHKHHPQVLLYLARALYDSNKLNEAQSCLKRAIHLAPTDYKLRFNYALTMQEWAVRS 827

Query: 802 LQKTRRTADEVRSTVAE-----LENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLL 856
            +K R   D  +    +     L+ A R + HL         G DE K+  HV +C   L
Sbjct: 828 FRKERPPGDPTKLPDLQRAELLLKEAHRHYEHLKVLGR-ERSGLDEVKLTAHVSFCAAQL 886

Query: 857 DAAKIHREAAEREEQQNRQRQ 877
                  EAA +E+ + R R+
Sbjct: 887 RKTPDLLEAAAKEDYEARLRR 907



 Score =  119 bits (299), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 74/231 (32%), Positives = 116/231 (50%), Gaps = 10/231 (4%)

Query: 4   VYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQIL 63
           +Y+PV +S E V + L Q+P +A ++LD+L +E APL  W   AR Y +QG+++ F  I 
Sbjct: 5   IYVPVVDSNEIVAIDLSQVPENAEELLDLLVSEAAPLSTWFDCARAYLQQGRLDGFDLIY 64

Query: 64  EEGSSP----EIDEYYAD-VRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYN 118
           E  +S     E++ Y+     YERI    A         + E     K      A +   
Sbjct: 65  ETATSEETAVEVERYFGQKPTYERILFFTAKAAVLIAQARDEKTADSKARLLSDARKLIT 124

Query: 119 KASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK---IVLEADRDNVPALLGQACVEFNR 175
           +A  +D +E    +  G   LA+G+++ AS  FK         R NV   L  A + + +
Sbjct: 125 QAGTLDQNEQLVHLSSGLHFLARGDLQNASRDFKRAATCRNNGRANVIGYLAVAGLAYQQ 184

Query: 176 GRYSDSLEFYKRALQVHP--SCPGAIRLGIGLCRYKLGQLGKARQAFQRAL 224
            +Y +++ +Y+ AL+  P   CP  +RLGI  C +KLG L  AR A++R L
Sbjct: 185 QQYKEAMSYYRAALRDFPGSGCPAEVRLGIAACAFKLGDLATARAAYRRGL 235


>gi|358373303|dbj|GAA89902.1| RNA polymerase II transcription elongation factor [Aspergillus
            kawachii IFO 4308]
          Length = 1209

 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 256/1035 (24%), Positives = 432/1035 (41%), Gaps = 185/1035 (17%)

Query: 2    ACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQ 61
            + + IP    + EV V+L+ LP D +++  +L+ E+A  + W+ IA  Y KQ +++    
Sbjct: 33   SAIDIPASTLDSEVEVSLEILPDDPTELCTLLENEKAAKNFWVTIALAYAKQKQLDHAID 92

Query: 62   ILEEGSSPEIDEYYADVRYERIAIL------------NALGVYYTYLGKIETKQREKEEH 109
            IL +G    +         E++ +L            NA  V     G++ T+ + K+ +
Sbjct: 93   ILNKG----LASVAHGATKEKLGLLGWVCWLLMLKSRNAPRVAPE--GELYTEAKTKDHY 146

Query: 110  FILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-----------------VEQASSAFK 152
              LAT   N+ASR++   P  ++ +G L L +                   VE    A K
Sbjct: 147  LQLATSTLNEASRLNPAFPPLFLARGVLSLLRASLHPPRPVRPGTVDTSERVESLRQALK 206

Query: 153  IVLEADR----DNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGA-IRLGIGLCR 207
               E+ +     NV A+LG+A  ++  GRY+++LE Y++ L   PS      R+GIG C 
Sbjct: 207  CFDESSKAFGGRNVMAILGRARTQYLLGRYAEALEGYQKVLMKMPSLTDPDPRIGIGSCL 266

Query: 208  YKLGQLGKARQAFQRALQLDPENVEALVALAVMDL-------QANEAAG--IRKGMEK-M 257
            ++LG   +A+ A++RAL L+P++  A + LAV  L         + A G   +  M +  
Sbjct: 267  WQLGFKEQAKVAWERALALNPDSKVANILLAVYYLYDSSRHATTDPAFGSLYKVAMTQYT 326

Query: 258  QRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHS 317
            Q+AF++     M  +    +F     +  VE L   A+  T+     S  +Y L R  H 
Sbjct: 327  QKAFKLDKEYPMTCSLFGGYFLLRKAYSTVETLARKAIEHTDVMQIASDGWYLLGRKSHY 386

Query: 318  KGDYEKAGLYYMASVKEINKPHEFIFP-YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNC 376
            +GD  +A  YY  S +      +   P  +G  Q+Q+   DF  A    EK+++    N 
Sbjct: 387  EGDLTRAAEYYNRSDQARGGGEKGYLPAKFGTVQMQVSNKDFDGAKFRLEKIIQ-QTKNA 445

Query: 377  ETLKALGHIYVQ--------------LGQIEKAQELLR--------KAAKIDPRDAQAFI 414
            E +  LG ++ +                +I+KA  LL         +  KI P D    +
Sbjct: 446  ECMVLLGALHAEEVFAAQRSGSKEDKSAEIKKAINLLESVRALWKDETKKISP-DESVLV 504

Query: 415  DLGELLISSDTGAALDAFKTARTL-LKKAGEE-------------------VPIEVLNNI 454
             L  L   S    ++        + L +  EE                   +P ++LNN+
Sbjct: 505  YLARLYEQSAPEKSMQCLTQLEEMQLAEVAEEERPEGVEDEEQVKAALRVHLPPQLLNNM 564

Query: 455  GVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFEND 514
            G   ++  + E A   F+ AL        + SK K   +D  A +               
Sbjct: 565  GCFLYQAEKIERARTMFQAALD-----ACVRSKEKESELDTDALV--------------- 604

Query: 515  GNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNN 574
                       T+ FNL R  E       A  +Y+ +L ++ DY +A  RL  IA     
Sbjct: 605  ----------TTISFNLGRTYEAADMPEEAKKVYQGLLERHADYTEANARLTYIA----- 649

Query: 575  LQLSIELVNEALKVNGKYPNALSMLGDLELKND-DWVKAKETFRAASDATDGK------- 626
              L     +E  K   K   A S   +LE++    W  +K   RAA+ A D +       
Sbjct: 650  --LRQSPTDEGPKKMAKLYEADST--NLEVRALFGWYLSKSKKRAANLAEDHEQRHYKHT 705

Query: 627  -------DSYATLSLGNWNYFAA--LRNEKRAPKLEATHL-EKAKELYTRVIVQHTSNLY 676
                   D Y+   +GN +   A  +R +    K +   + E+A E + + +     N Y
Sbjct: 706  LQYYDKHDRYSLTGMGNIHLSTARDMRRDSDQDKEKRRKMYERAVEFFDKALQLDPRNAY 765

Query: 677  AANGAGVVLAEKGQFDVSK-DLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMK 735
            AA G  + L +  +   S   +F+++++       ++   V++NL HVY     +  +++
Sbjct: 766  AAQGIAIALVDDKKDHASAVHIFSKIRDT------LRDASVYLNLGHVYAELRQYTRSIE 819

Query: 736  MYQNCLRKFYYNTDAQIL-----LYLARTHYEAEQWQDCKKSL---LRAIHLAPSNYTLR 787
             Y+  L K     DAQIL     ++LA+   E    Q  K +L    RA  +AP    L 
Sbjct: 820  HYEAALSKDRAR-DAQILACLGRVWLAKGKQEM-NLQAMKTALDYAQRAHSVAPGQVHLE 877

Query: 788  FDAGVAMQKFSAST--LQKTRRTADEVRSTVAELENAVRVFSHLSAASN-LHLHGFDEKK 844
            F+      + ++ T  L +T++T  +V+     L+ AV  F+ ++ A N  +     E++
Sbjct: 878  FNVAFVQNQIASLTYGLPETQKTVQDVQDAAEGLQQAVETFNRVAQAKNPPYPSSALEQR 937

Query: 845  INTHVEYCKHLLDAAKIHRE-----------AAEREEQQNRQRQEAARQAALAEEAR--R 891
             N      K L  A +  +E           A E  E + RQR+E  R+A  AE  R  R
Sbjct: 938  ANMGRTILKQLERALQSQKEYEEKNAAKLQQAREAREAEKRQREEEVRKAQEAERERKQR 997

Query: 892  KAEEQKKYLLEKRKL 906
             AEE+++ + E ++L
Sbjct: 998  VAEERQRMIEEAQRL 1012


>gi|317037100|ref|XP_001398431.2| RNA polymerase II transcription elongation factor (Ctr9) [Aspergillus
            niger CBS 513.88]
          Length = 1214

 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 257/1035 (24%), Positives = 432/1035 (41%), Gaps = 185/1035 (17%)

Query: 2    ACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQ 61
            + + IP    + EV V+L+ LP D +++  +L+ E+A  + W+ IA  Y KQ +++    
Sbjct: 33   SAIDIPASTLDSEVEVSLEILPDDPTELCTLLENEKAAKNFWVTIALAYAKQKQLDHAID 92

Query: 62   ILEEGSSPEIDEYYADVRYERIAIL------------NALGVYYTYLGKIETKQREKEEH 109
            IL +G    +         E++ +L            NA  V     G++ T+ + K+ +
Sbjct: 93   ILNKG----LASVAHGATKEKLGLLGWVCWLLMLKSRNAPRVAPE--GELYTEAKTKDHY 146

Query: 110  FILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-----------------VEQASSAFK 152
              LAT   N+ASR++   P  ++ +G L L +                   VE    A K
Sbjct: 147  LQLATSTLNEASRLNPAFPPLFLARGVLSLLRASLHPPRPVRPGTVDTSERVESLRQALK 206

Query: 153  IVLEADR----DNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGA-IRLGIGLCR 207
               E+ +     NV A+LG+A  ++  GRY+++LE Y++ L   PS      R+GIG C 
Sbjct: 207  CFDESSKAFGGRNVMAILGRARTQYLLGRYAEALEGYQKVLMKMPSLTDPDPRIGIGSCL 266

Query: 208  YKLGQLGKARQAFQRALQLDPENVEALVALAVMDL-------QANEAAG--IRKGMEK-M 257
            ++LG   +A+ A++RAL L+P++  A + LAV  L         + A G   +  M +  
Sbjct: 267  WQLGFKEQAKVAWERALALNPDSKVANILLAVYYLYDSSRHATTDPAFGSLYKVAMTQYT 326

Query: 258  QRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHS 317
            Q+AF+I     M  +    +F     +  VE L   A+  T+     S  +Y L R  H 
Sbjct: 327  QKAFKIDKEYPMTCSLFGGYFLLRKAYSTVETLARKAIEHTDVMQIASDGWYLLGRKSHY 386

Query: 318  KGDYEKAGLYYMASVKEINKPHEFIFP-YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNC 376
            +GD  +A  YY  S +      +   P  +G  Q+Q+   DF  A    EK+++    N 
Sbjct: 387  EGDLTRAAEYYNRSDQARGGGEKGYLPAKFGTVQMQVSNKDFDGAKFRLEKIIQ-QTKNA 445

Query: 377  ETLKALGHIYVQ--------------LGQIEKAQELLR--------KAAKIDPRDAQAFI 414
            E +  LG ++ +                +I+KA  LL         +  KI P D    +
Sbjct: 446  ECMVLLGALHAEEVFAAQRSGSKEDKSVEIKKAINLLESVRALWKDETKKISP-DESVLV 504

Query: 415  DLGELLISSDTGAALDAFKTARTL-LKKAGEE-------------------VPIEVLNNI 454
             L  L   S    ++        + L +  EE                   +P ++LNN+
Sbjct: 505  YLARLYEQSAPEKSMQCLTQLEEMQLAEVAEEERPEGVEDEEQVKAALRVHLPPQLLNNM 564

Query: 455  GVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFEND 514
            G   ++  + E A   F+ AL        + SK K   +D  A +               
Sbjct: 565  GCFLYQAEKIERARTMFQAALD-----ACVRSKEKESELDTDALV--------------- 604

Query: 515  GNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNN 574
                       T+ FNL R  E       A  +Y+ +L ++ DY +A  RL  IA     
Sbjct: 605  ----------TTISFNLGRTYEAADMPEEAKKVYQGLLERHADYTEANARLTYIA----- 649

Query: 575  LQLSIELVNEALKVNGKYPNALSMLGDLELKND-DWVKAKETFRAASDATDGK------- 626
              L     +E  K   K   A S   +LE++    W  +K   RAA+ A D +       
Sbjct: 650  --LRQSPTDEGPKKMAKLYEADST--NLEVRALFGWYLSKSKKRAANLAEDHEQRHYKHT 705

Query: 627  -------DSYATLSLGNWNYFAA--LRNEKRAPKLEATHL-EKAKELYTRVIVQHTSNLY 676
                   D Y+   +GN +   A  +R +    K +   + E+A E + + +     N Y
Sbjct: 706  LQYYDKHDRYSLTGMGNIHLSTARDMRRDSDQDKEKRRKMYERAVEFFDKALQLDPRNAY 765

Query: 677  AANGAGVVLAEKGQFDVSK-DLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMK 735
            AA G  + L +  +   S   +F+++++       ++   V++NL HVY     +  +++
Sbjct: 766  AAQGIAIALVDDKKDHASAVHIFSKIRDT------LRDASVYLNLGHVYAELRQYTRSIE 819

Query: 736  MYQNCLRKFYYNTDAQIL-----LYLARTHYEAEQWQDCKKSL---LRAIHLAPSNYTLR 787
             Y+  L K     DAQIL     ++LA+   E    Q  K +L    RA  +AP    L 
Sbjct: 820  HYEAALSKDRAR-DAQILACLGRVWLAKGKQEM-NLQAMKTALDYAQRAHSVAPGQVHLE 877

Query: 788  FDAGVAMQKFSAST--LQKTRRTADEVRSTVAELENAVRVFSHLSAASN-LHLHGFDEKK 844
            F+      + ++ T  L +T++T  +V+     L+ AV  F+ ++ A N  +     E++
Sbjct: 878  FNVAFVQNQIASLTYGLPETQKTVQDVQDAAEGLQQAVETFNRVAQAKNPPYPSSALEQR 937

Query: 845  INTHVEYCKHLLDAAKIHRE-----------AAEREEQQNRQRQEAARQAALAEEAR--R 891
             N      K L  A +  +E           A E  E + RQR+E  R+A  AE  R  R
Sbjct: 938  ANMGRTILKQLERALQSQKEYEEKNAAKLQQAREAREAEKRQREEEVRKAQEAERERKQR 997

Query: 892  KAEEQKKYLLEKRKL 906
             AEE+++ + E ++L
Sbjct: 998  VAEERQRMIEEAQRL 1012


>gi|116208102|ref|XP_001229860.1| hypothetical protein CHGG_03344 [Chaetomium globosum CBS 148.51]
 gi|88183941|gb|EAQ91409.1| hypothetical protein CHGG_03344 [Chaetomium globosum CBS 148.51]
          Length = 1061

 Score =  177 bits (449), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 235/954 (24%), Positives = 399/954 (41%), Gaps = 182/954 (19%)

Query: 2   ACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQ 61
           + + IP+Q+ + EV + L+ LP D +++  + + EQ+    W+ +A  Y KQ K++   +
Sbjct: 35  STIDIPMQD-DVEVEIDLEVLPDDPTELCSVFENEQSARIYWMTVALAYAKQNKIDFAIE 93

Query: 62  ILEEGSSPEIDEYYADVRYERIAILNALGVYYTYL----------GKIETKQREKEEHFI 111
           +L  G++          + E++ I+  +   Y +           G + +  + KE +  
Sbjct: 94  MLIRGANA-----LQGNQREKLGIITCICWLYLWKSREAPRVAPEGSLVSDAKTKEYYLQ 148

Query: 112 LATQYYNKASRIDMHEPSTWVGKGQLLLAKGEV---------------EQASSAFKIVLE 156
           LATQ  N ASRI+   P  ++ +G L+L K  +               EQ  +A K   E
Sbjct: 149 LATQSLNDASRINPAFPPLFLARGVLILLKASLQPSSKAPGAVDSRKSEQLRNALKSFEE 208

Query: 157 ADR----DNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSC--PGAIRLGIGLCRYKL 210
           A R     N+ A++G+A   F+ GRY D+L  Y+  +Q  P    P   R+GIG C ++L
Sbjct: 209 AIRVSQGKNMLAVMGKARALFSLGRYPDALSAYQEVVQKMPDLVDPDP-RIGIGCCFWQL 267

Query: 211 GQLGKARQAFQRALQLDPENVEALVALAVMDLQA------NEAAGIR---KGM-EKMQRA 260
           G    A+ A+ R L+++P++  A + L +  L A      N    IR   K M E  Q++
Sbjct: 268 GYKDDAKLAWDRCLEINPDSKYANILLGLYHLDASGHVPTNSPEFIRLYKKAMTEYTQKS 327

Query: 261 FEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGD 320
           F++     +     A +F    Q   V+ L   A+  T+     S  +Y LAR+ H  GD
Sbjct: 328 FKLDKNLPLTCATFAGYFLSRKQFANVDSLAHKAIEYTDVNAIASDGWYLLARTEHHNGD 387

Query: 321 YEKAGLYYMASVKEINKPHEFIFP-YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 379
            EKA  YY  +            P  +G+ Q+ +   D   A    EK+++ +  N E +
Sbjct: 388 LEKASDYYRRADDARGGTDRGYLPAKFGVAQLSVLKNDLGEAKLRLEKMIQ-HAKNYEAM 446

Query: 380 KALGHIYVQ---------------------LGQIEKAQELLRKAAKIDPRDAQAFIDLGE 418
             LG +Y +                     LG +E  +   + + K    DA   ++L  
Sbjct: 447 ILLGTLYAEEVFANQAAAVKEDKSAEAKKALGLLEGVRSAWKDSKKNLAPDAAVLLNLAR 506

Query: 419 LLISSDTGAALDAFK-----------------------TARTLLKKAGEEVPIEVLNNIG 455
           L  +     AL   +                         R  ++K    +P ++LNNIG
Sbjct: 507 LYENESPDKALQCLQQVEQLEMEQVPQSEYPADTEDEAATRAAIRKL---LPPQLLNNIG 563

Query: 456 VIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDG 515
             + + G+   A + F+ AL                  D+ A + Q          END 
Sbjct: 564 CFYSQDGKHHLATEFFQAAL------------------DSCARISQ---------TEND- 595

Query: 516 NHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNL 575
             +++     T+ FNL R  E   D   A   Y  +L ++ DY DA  RLA I K R N 
Sbjct: 596 --LDIDALLTTISFNLGRSYEYEGDADTAIKTYEQLLSRHSDYTDARTRLAYI-KLRKN- 651

Query: 576 QLSIELVNEALKVNGKYPNALSML-----GDLELKN-DDWV--KAKETFRAASDATDGK- 626
                        N + P+A++ L      DLE++    W   K     R A+ A D + 
Sbjct: 652 ------------PNKEGPDAVAKLYQENSSDLEVRALYGWFLGKVNSKKRPANIAEDPEQ 699

Query: 627 -------------DSYATLSLGNWNYFAA--LRNEKRAPKLE-ATHLEKAKELYTRVIVQ 670
                        D YA + +GN +  +A  +R E    K + +    +A E + + +  
Sbjct: 700 RHYKHTLQNYDKHDRYALVGMGNLHLMSAREMRRETEQDKQKRSAAYNRAVEFFDKALQL 759

Query: 671 HTSNLYAANGAGVVLAE-KGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGN 729
              N YAA G  + L E +  +  +  +F +V+E       +Q   V++NL H+Y     
Sbjct: 760 DPKNAYAAQGVAIALVEDRKDYKNALQIFIKVRET------IQDAHVYVNLGHIYAELRQ 813

Query: 730 FALAMKMYQNCLRKFYYNTDAQILLYLARTHY---EAEQWQDCKKSLL----RAIHLAPS 782
           F+ A++ Y+  L K     DA I+  L RT      AE+  D  K  L    +A+ +AP 
Sbjct: 814 FSKAIESYELALTKEGKANDAGIISCLGRTWLNKGRAERNLDAYKMALDHAKKALAVAPD 873

Query: 783 NYTLRFD-AGVAMQ-KFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASN 834
               +F+ A V +Q   +  +++ + RT+ ++      LE A++    ++A+ +
Sbjct: 874 QLHFKFNVAFVQIQVALTLHSMRDSERTSFQLEEAAEGLEAAIKALDEIAASPS 927


>gi|367049860|ref|XP_003655309.1| hypothetical protein THITE_2118878 [Thielavia terrestris NRRL 8126]
 gi|347002573|gb|AEO68973.1| hypothetical protein THITE_2118878 [Thielavia terrestris NRRL 8126]
          Length = 1281

 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 233/954 (24%), Positives = 396/954 (41%), Gaps = 182/954 (19%)

Query: 2   ACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQ 61
           + + IP+Q+ E EV + L  LP D +++  + + E +P   W+ +A  Y KQ KV+   +
Sbjct: 32  STIDIPMQD-EIEVEIDLQVLPDDPTELCAVFENEHSPRIYWMTVALAYAKQNKVDFAIE 90

Query: 62  ILEEGSSPEIDEYYADVRYERIAILNALGVYYTYL----------GKIETKQREKEEHFI 111
           +L  G+    +   A+ R E+++I+  L   Y +           G + ++ + KE +  
Sbjct: 91  MLTRGA----NVLQANQR-EKLSIITCLCWLYLWKSREAPRVAPEGSLASEAKTKEYYLQ 145

Query: 112 LATQYYNKASRIDMHEPSTWVGKGQLLL----------AKGEV-----EQASSAFKIVLE 156
           LATQ  N ASRI+   P  ++ +G L+L          A G V     EQ  +A K   E
Sbjct: 146 LATQSLNDASRINPAFPPLFLARGVLILLRASLQPPSKAPGAVDSHKAEQLRNALKSFEE 205

Query: 157 ADR----DNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSC--PGAIRLGIGLCRYKL 210
           A R     N+ A++G+A V  + GRY ++L  Y+  L   P    P   R+GIG C ++L
Sbjct: 206 AIRVSQGRNMLAVMGKARVLSSLGRYPEALAAYQDVLAKMPDMVDPDP-RIGIGCCFWQL 264

Query: 211 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGI---------RKGM-EKMQRA 260
           G    A+ A++R L+++PE+  A + L +  L A+              +K M E  Q++
Sbjct: 265 GFKDDAKAAWERCLEINPESKYANILLGLYYLDASGHVPTHSPEFIRLYKKAMTEYTQKS 324

Query: 261 FEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGD 320
           F++     +     A +F    Q   VE L   A+  T+     S  +Y LAR  H  G+
Sbjct: 325 FKLDKNLPLTCATFAGYFLSRKQFPNVEALAHKAIQNTDVNAIASDGWYLLARKEHYDGN 384

Query: 321 YEKAGLYYM-ASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 379
            E+A  YY  A          F+   +G+ Q+ +   D   A    EK+++    N E +
Sbjct: 385 LERASDYYRRADDARGGTERGFLPAKFGMAQLSVLKNDLGEAKLRLEKMIQ-QSKNYEAM 443

Query: 380 KALGHIYVQ---------------------LGQIEKAQELLRKAAKIDPRDAQAFIDLGE 418
             LG +Y +                     +G +E A+   +   K    D    ++L  
Sbjct: 444 VLLGTLYAEEVFANQSAAVKEDKSAEAKKAIGLLEGARSAWKDPKKNLAPDTAVLLNLAR 503

Query: 419 LLISSDTGAALDAFK-----------------------TARTLLKKAGEEVPIEVLNNIG 455
           L        AL   +                         R  ++K    +P ++LNNIG
Sbjct: 504 LYEQDSPDKALQCLQQVEQLEIEQIPQSEYPADREDEAATRAAIRKL---LPPQLLNNIG 560

Query: 456 VIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDG 515
             + + G+ + A + F+ AL     ++  +S+     +D  A +                
Sbjct: 561 CFYSQDGKHQLATEFFQAALDSCARISQTESE-----LDTDALL---------------- 599

Query: 516 NHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNL 575
                     T+ FNL R  E   +   A   Y  +L ++ DY DA  RLA I   RN  
Sbjct: 600 ---------TTISFNLGRSYESEGEVDKAVETYERLLSRHSDYTDARTRLAYINLRRN-- 648

Query: 576 QLSIELVNEALKVNGKYPNALSML-----GDLELKN-DDWV--KAKETFRAASDATDGK- 626
                        N + P+ ++ L      DLE++    W   K     R A+ A D + 
Sbjct: 649 ------------PNKEGPDGVAKLYQENSADLEVRALYGWFLGKVNSKKRPANLAEDPEQ 696

Query: 627 -------------DSYATLSLGNWNYFAA--LRNEKRAPKLE-ATHLEKAKELYTRVIVQ 670
                        D YA + +GN +  +A  +R E    K + +    +A E + + +  
Sbjct: 697 RHYKHTLQNYDKHDRYALVGMGNLHLMSAREMRRETEQDKQKRSAAYNRAVEFFDKALQL 756

Query: 671 HTSNLYAANGAGVVLAE-KGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGN 729
              N YAA G  + L E K  +  +  +F +V+E       +Q   V++N+ H+Y   G 
Sbjct: 757 DPKNAYAAQGIAIALVEDKKDYKSALQIFLKVRET------IQDAHVYVNMGHIYAELGQ 810

Query: 730 FALAMKMYQNCLRKFYYNTDAQILLYLART---HYEAEQWQDCKKSLL----RAIHLAPS 782
           F  A++ Y+  L K     D  IL  L RT       E+  D  K  L    +A+ +AP 
Sbjct: 811 FTKAIESYEIALSKEGKANDPGILSCLGRTWLNKGRTERNLDAYKMALEYAKKALSVAPE 870

Query: 783 NYTLRFD-AGVAMQ-KFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASN 834
              L+F+ A V +Q   +  +++ + RT+ ++      LE+A++    ++A+ +
Sbjct: 871 QLHLKFNVAFVQIQLALTLHSMRDSERTSFQLEEAAEGLESAIKALDEIAASPS 924


>gi|212536086|ref|XP_002148199.1| RNA polymerase II transcription elongation factor (Ctr9), putative
            [Talaromyces marneffei ATCC 18224]
 gi|210070598|gb|EEA24688.1| RNA polymerase II transcription elongation factor (Ctr9), putative
            [Talaromyces marneffei ATCC 18224]
          Length = 1190

 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 248/1056 (23%), Positives = 436/1056 (41%), Gaps = 199/1056 (18%)

Query: 2    ACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQ 61
            + + IP    + EV V+L++LP D +++  +L+ E+A  + W+II+  Y KQ +++   +
Sbjct: 33   SAIDIPASTFDSEVEVSLEELPDDPTELCTLLENEKAAKNFWVIISLAYAKQNQLDHAIE 92

Query: 62   ILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQ-------------REKEE 108
            IL++G    +         E++ +LN    +  +L  I+++Q             + K+ 
Sbjct: 93   ILQKG----LASVAHGATKEKLGLLN----WLCWLLMIKSRQAPRVAPDGDNSDVKTKDF 144

Query: 109  HFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-----------------VEQASSAF 151
            +   AT   N+ASR++      ++ +G L L +                   VE    A 
Sbjct: 145  YLQQATSTLNEASRLNPAYTPLFLARGVLSLLRASLYPPRPVRTGIPDTSERVESLRQAL 204

Query: 152  KIVLEADR----DNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAI----RLGI 203
            K   EA +     NV A LG A  +++ G Y+++L  Y+  L      PG I    R+GI
Sbjct: 205  KCFEEASKASGGRNVMAHLGLARAQYSLGNYAEALLVYQTVLT---RMPGLIDPDPRIGI 261

Query: 204  GLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGI---------RKGM 254
            G C ++LG   +A+ A++RAL L+P++  A + +    L ++              R  M
Sbjct: 262  GCCLWQLGFKERAKDAWERALFLNPKSKVASILVGTYYLYSSSQYPTSDPRFGELYRTSM 321

Query: 255  EKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARS 314
               Q + ++     MA    A +      +  VE L   A+  T+     S  +Y L R 
Sbjct: 322  THTQGSLKLDKDYPMACARFAGYKLIRKDYKAVEVLARKAIEQTDVVSIASEGWYLLGRK 381

Query: 315  YHSKGDYEKAGLYYMASVKEINKPHEFIFP-YYGLGQVQLKLGDFRSALTNFEKVLEIYP 373
             H +GD  KA  Y+  S +          P  +G+ Q+Q+K  D   A    E +++   
Sbjct: 382  AHYEGDTAKASEYFNRSDQARGGGESGFLPAKFGVVQMQVKSKDLDGAKFRLENIIQ-QT 440

Query: 374  DNCETLKALGHIYVQ---------------------LGQIEKAQELLRKAAKIDPRDAQA 412
             N E++  LG +  +                     +  +E  + L +  AK  P D   
Sbjct: 441  KNPESMALLGALLAEDVFAAQASGSKDDKTADATRAISLLESVRSLWKDPAKNIPPDESV 500

Query: 413  FIDLGELLISSDTGAAL---------------DAFKTARTL----LKKAGEE-VPIEVLN 452
             I L  L  S+    ++               D  +   TL    LK A  E +P ++LN
Sbjct: 501  LIYLSRLYESTSPDKSMQCLTQLEEIQMDQISDQDRPDATLQNGELKAALREYLPPQLLN 560

Query: 453  NIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFE 512
            NIG   ++ G+   A + F+ A      LT  D   +     A+ ++L            
Sbjct: 561  NIGCFLYQSGKVAQARELFQAA------LTACDKSEELEGEKATDALL------------ 602

Query: 513  NDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKAR 572
                         TV +N  R LE +     A  +Y  +L ++ DY +A  R+  IA   
Sbjct: 603  ------------TTVRYNFGRSLEALDLPDEAKKVYESLLERHSDYTEASARMTYIA--- 647

Query: 573  NNLQLSIELVNEALKVNGKYPNALSMLGDLELKND-DWVKAKETFRAASDATDGK----- 626
                L     +E  K  GK   + S   +LE++    W  +K   RAA+ A D +     
Sbjct: 648  ----LRQSPTDEGPKKMGKLYESDST--NLEVRALFGWYLSKSKKRAANLAEDPEQRHYK 701

Query: 627  ---------DSYATLSLGNWNYFAA--LRNEKRAPKLEATHL-EKAKELYTRVIVQHTSN 674
                     D YA   +GN +   A  +R E  A K +   + E+A E + + +     N
Sbjct: 702  HTLQHFDKHDRYALTGMGNVHLLTARDMRRETDADKEKRRKMYERAVEFFDKALQLDPKN 761

Query: 675  LYAANGAGVVLA-EKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALA 733
             YAA G  + L  ++  F  +  +F+++++    S       V++NL H Y     F+ +
Sbjct: 762  AYAAQGIAIALVDDRKDFTGAVQIFSKIRDTIKDS------SVYLNLGHAYAELKQFSRS 815

Query: 734  MKMYQNCLRKFYYNTDAQILLYLARTHY---EAEQWQDCKKSLL----RAIHLAPSNYTL 786
            ++ Y+  L K     DAQIL  L R  +   + E+     K+ L    RA+ +AP    L
Sbjct: 816  IECYEMALSKDRAR-DAQILACLGRVWWLRGKHEKNLTAMKTALDYASRALAVAPEQAHL 874

Query: 787  RFDAGVAMQKFS--ASTLQKTRRTADEVRSTVAELENAVRVFSHLSAA------------ 832
             F+      + +   ++L +T+RT  +++     LE A+  F+ ++ A            
Sbjct: 875  EFNVAFVQNQIALLVNSLPETQRTLQDLQEAAEGLEKAIETFTRIAQAKTPPYPRESLEQ 934

Query: 833  -SNLHLHGFD---EKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEAARQAALAEE 888
             +N+  +      E+ I    EY +   +A K+ +  A RE +  R+ +E  +   L +E
Sbjct: 935  RANMGRNTISKQLERSIQNQKEYEEK--NALKLQQARAAREAELKRREEEVQKAQELEQE 992

Query: 889  ARRKAEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVK 924
             +R+  EQ++ ++E      E +RL  +    QR +
Sbjct: 993  RKRQVAEQRQRIIE------ETQRLAAKRAEEQRAR 1022


>gi|389638942|ref|XP_003717104.1| tetratricopeptide repeat protein 1 [Magnaporthe oryzae 70-15]
 gi|351642923|gb|EHA50785.1| tetratricopeptide repeat protein 1 [Magnaporthe oryzae 70-15]
 gi|440473075|gb|ELQ41897.1| tetratricopeptide repeat protein 1 [Magnaporthe oryzae Y34]
 gi|440478300|gb|ELQ59142.1| tetratricopeptide repeat protein 1 [Magnaporthe oryzae P131]
          Length = 1221

 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 232/942 (24%), Positives = 389/942 (41%), Gaps = 164/942 (17%)

Query: 4   VYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQIL 63
           + +PVQ+ +E V + L+ L  D +D+ D+ + E A    W+ +A  Y K  K++   ++L
Sbjct: 31  IDVPVQDEDEAVEINLEDLVDDPTDLCDLFENENAARTYWMAVALAYAKLHKIDCAIEVL 90

Query: 64  EEGSSPEIDEYYADVRYERIAILNALGVYYTYL----------GKIETKQREKEEHFILA 113
             G+S   +        E++ I++ L   Y +           G + ++ + KE +  LA
Sbjct: 91  TRGASAMQNHNP----REKLGIVSCLCWMYLWKSREAPRVAPEGALASEVKTKEHYLQLA 146

Query: 114 TQYYNKASRIDMHEPSTWVGKGQLLLAK------------GEVEQA-----SSAFKIVLE 156
              +N+ASRI+   P  ++ KG L L +            G V+ A      SA K   +
Sbjct: 147 NTTFNEASRINPAFPPLFLAKGVLYLLRASLQTSVKSGQVGSVDAAKAGLLGSALKSFED 206

Query: 157 ADR----DNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSC--PGAIRLGIGLCRYKL 210
           A R     N+ AL+G++  +F+ G+Y+++L  Y+  L   P    P   RLGIG C ++L
Sbjct: 207 ALRVSQGKNMLALMGKSRAQFSLGKYAEALAGYQDVLHRMPEMVDPDP-RLGIGCCFWQL 265

Query: 211 GQLGKARQAFQRALQLDPENVEA--LVALAVMD----LQANEAAGIR---KGM-EKMQRA 260
           G    A+ A++R L+++PE+  A  LV L  +D    +  N    IR   K M E  Q++
Sbjct: 266 GHKDDAKAAWERCLEINPESKIANILVGLYYLDQSGQVPTNSPEFIRLYKKAMTEYTQKS 325

Query: 261 FEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGD 320
           F++     +     A +F        V+ L   A+  T+     S  +Y LAR  H +GD
Sbjct: 326 FKLSKDLPLTCATFAGYFLSRKSFANVDSLAHKAIQYTDVNAIASDGWYLLARKEHYQGD 385

Query: 321 YEKAGLYYMASVKEINKPHEFIFP-YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 379
            EKA  YY  S            P  +G+ Q+ +   D+  A    EK+++    N E +
Sbjct: 386 TEKASDYYRRSDDARGGTDRGYLPAKFGVAQLSVVKEDYGEAKLRLEKMIQ-QSRNYEAM 444

Query: 380 KALGHIYVQ--------------LGQIEKAQELL---RKAAK-----IDPRDAQAFIDLG 417
             LG +Y +                +I+KA  LL   R A K     + P DA   ++L 
Sbjct: 445 ILLGTLYAEEVFATQYANVKEDKSAEIKKAISLLEGVRTAWKDTKKNLSP-DAAVLLNLA 503

Query: 418 ELLISSDTGAALDAFKTARTL-------------------LKKAGEE-VPIEVLNNIGVI 457
            L  +     AL   +    L                   LK A  + +P ++LNNIG  
Sbjct: 504 RLYETEHPDKALQCLQQVEQLEIELISDSDRPQGIEDEAQLKAAVRKLLPPQLLNNIGCF 563

Query: 458 HFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNH 517
           H +    E+A   F+ ALG  + +   D +  T  +                        
Sbjct: 564 HAQHERHEAASDMFEAALGACMRIQESDDQMDTDAL------------------------ 599

Query: 518 VELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQL 577
                   T+ FNL R  E       A  +Y  +L ++ DY DA +RLA I   RN  + 
Sbjct: 600 ------VTTISFNLGRSYESRGLWDQAIEVYEGLLKRHDDYTDAKIRLAYIKLRRNPQKE 653

Query: 578 SIELVNEALKVNGKYPNALSM-------LGDLELKNDDWVKAKET----FRAASDATDGK 626
             + V +  + N   P  L +       LG +  +      A++     ++      D  
Sbjct: 654 GPDAVAKLYQGN---PADLEVRALYGWYLGKVHSRKRPANIAEDPELRHYKHTLQHYDKH 710

Query: 627 DSYATLSLGNWNYFAALRNEKR-----APKLEATHLEKAKELYTRVIVQHTSNLYAANGA 681
           D YA + +GN  Y  + R  +R       +  AT+  +A E + + +     N YAA G 
Sbjct: 711 DCYALVGMGNL-YLMSAREMRRETDQDKSRRSATY-SRAVEFFEKALQLDPRNAYAAQGI 768

Query: 682 GVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCL 741
            + L E       KD  + +Q   S    ++   V +NL H++     F  A++ Y+  L
Sbjct: 769 AIALVED-----RKDHKSALQVFLSVRDTIKDAQVLVNLGHIFAELKQFTKAIENYEAAL 823

Query: 742 RKFYYNTDAQILLYLARTHYEAEQWQ----------DCKKSLLRAIHLAPSNYTLRFDAG 791
            K     D  IL  L RT     + +          DC K   +A+++AP     +F+  
Sbjct: 824 AKEGKANDPSILACLGRTWLNKGRAERDLEAYMKALDCAK---KALNVAPEQVHFKFNVA 880

Query: 792 VAMQKFSAST--LQKTRRTADEVRSTVAELENAVRVFSHLSA 831
               + + +   L +T+R+ ++++     LE+A+     L+A
Sbjct: 881 FVQIQLATTIYGLSETQRSLEQLQDAATGLESAIAALDELAA 922


>gi|346324770|gb|EGX94367.1| RNA polymerase II transcription elongation factor Ctr9, putative
           [Cordyceps militaris CM01]
          Length = 1192

 Score =  176 bits (445), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 243/1009 (24%), Positives = 426/1009 (42%), Gaps = 159/1009 (15%)

Query: 2   ACVYIPVQNSEEE--VRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQF 59
           + + IPVQ  +E+  V + L+ L  D +++  + + E A    W+ ++  Y KQ K++  
Sbjct: 31  SAIDIPVQGDQEDEAVEIDLEDLVDDPTELCTLFENEHAAKTYWMTVSLAYAKQHKIDHA 90

Query: 60  RQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGK---------IETKQREKEEHF 110
            ++L  G    I    ++ R ++++++  L   Y +  +         I   + + +E++
Sbjct: 91  IEMLIRGGGA-IQSNASNPR-DKVSMICCLCWMYLWKSREAPRVAPDGIRVSEAKTKEYY 148

Query: 111 I-LATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQAS---------------SAFKIV 154
           + LAT   N A+R++   P  ++ +G LLL +  ++  S               +A K  
Sbjct: 149 LQLATSSLNDAARLNPSFPPIFLARGVLLLLRASLQAPSKTAGGIGSEKQELLKTAVKSF 208

Query: 155 LEADR----DNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSC--PGAIRLGIGLCRY 208
            +A R     N+ AL+G+A   F+  +Y DSL  Y+  LQ  P    P   R+GIG C +
Sbjct: 209 DDALRVSQGKNMLALMGKARAFFSLQKYPDSLAIYQDVLQKKPDLVDPDP-RIGIGCCFW 267

Query: 209 KLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGI---------RKGM-EKMQ 258
           +LG    A+ A++R+L++ P++  A + L +  L A+    +         +K M E  Q
Sbjct: 268 QLGFKKDAKTAWERSLEITPDSKVANILLGLYHLDASGHVPVNSEDFVKLYKKAMTEYTQ 327

Query: 259 RAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSK 318
           ++F++     +  +  +N+F         ++L   A+  T+     S  +Y LAR  H  
Sbjct: 328 KSFKLDKDLPLTCSTFSNYFLSRKSWDNADKLAHKAIQYTDVNAIASDGWYVLARKAHYH 387

Query: 319 GDYEKAGLYYMASVKEINKPHEFIFP-YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCE 377
           GD E A  +Y  +           FP  +G  Q+ +   D   A    EK+++    + E
Sbjct: 388 GDTENANDFYRRADDARGGTDTGYFPAKFGAAQLSVMKNDLGEAKLRLEKMIQ-QSKSHE 446

Query: 378 TLKALGHIYVQ--------------LGQIEKAQELL---RKAAK-----IDPRDAQAFID 415
            +  LG +Y +                +++KA  LL   R A K     I P DA   ++
Sbjct: 447 AMILLGTLYAEEIFANQASDAKEDKSAEMKKAINLLEAVRSAWKNAKRNISP-DASVLLN 505

Query: 416 LGELLISSDTGAALDAFKTARTL----------LKKAGEE----------VPIEVLNNIG 455
           L  L  + +   AL   +    L           +   EE          +P ++LNNIG
Sbjct: 506 LARLYETDNPEKALQCLQQVEQLELEQIPSSEYPEGVTEEAEVQTAIRKFLPPQLLNNIG 565

Query: 456 VIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDG 515
             HF+  +   A + F+ ALG  + ++  DS   T  + +S S                 
Sbjct: 566 CFHFQAEKHVLASEMFEAALGACLKMSEKDSTVDTDALVSSIS----------------- 608

Query: 516 NHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNL 575
                        FNL R  E    +  A  +Y  +L ++ DY DA  RLA I   ++  
Sbjct: 609 -------------FNLGRSYESQGLSDKAVEVYESLLNRHDDYADARARLAYIKLRQSPN 655

Query: 576 QLSIELVNEALKVNGKYPNALSM----LGDLELKNDDWVKAKETFRAASDAT---DGKDS 628
           +   + V +  + N       ++    LG L  K    +     FR         D  D 
Sbjct: 656 KEGPDAVAKLYQDNPSDVEVRALYGWYLGKLSRKRPGNIVEDPEFRHYKHTLQNYDKHDR 715

Query: 629 YATLSLGNWNYFAA--LRNEKRAPKLE-ATHLEKAKELYTRVIVQHTSNLYAANGAGVVL 685
           YA + +GN +   A  +R E  A K + +    KA E Y + +     N YAA G  + L
Sbjct: 716 YALVGMGNLHMMQAREMRRETDADKQKRSAAYGKAVEFYEKALSLDPKNAYAAQGVAIAL 775

Query: 686 AE-KGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKF 744
            E K  +  +  +F +V++       ++ P +++NL H+Y     F+ A++ Y+  L K 
Sbjct: 776 VEDKKDYKNALAIFNKVRDT------IREPSLYVNLGHIYAELKQFSKAIESYEIALSKE 829

Query: 745 YYNTDAQILLYLART---HYEAEQWQDCKKSLL----RAIHLAPSNYTLRFD-AGVAMQK 796
             + D  IL  L RT      AE+  D     L    +A+ +AP     +F+ A V +Q 
Sbjct: 830 GKHNDPVILACLGRTWLNRGRAERDIDAYGKALECAEKALEVAPDQVHYKFNVAFVQIQL 889

Query: 797 FSA-STLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGFD-EKKINTHVEYCKH 854
            +    LQ+ RRTA+++      LE A+     ++A         D E++ N      + 
Sbjct: 890 VTTIQGLQENRRTAEQLEKAAKGLEAAIESLDAIAAHPQTPYPKHDVEQRANMARNTLRK 949

Query: 855 LLDAA--------KIHRE---AAEREEQQNRQRQEAARQAALAEEARRK 892
            L+ A        ++++E   AA+ + +   +R+EA R A LA+E  R+
Sbjct: 950 QLERAIGKQKEWEEVNKEKIAAAQSQREAELKRREADRAAILAKEKERQ 998


>gi|354544439|emb|CCE41162.1| hypothetical protein CPAR2_301510 [Candida parapsilosis]
          Length = 1126

 Score =  175 bits (444), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 247/978 (25%), Positives = 417/978 (42%), Gaps = 140/978 (14%)

Query: 24  RDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQILEEGSSPEIDEYYADVRYERI 83
           +D S+I+  L   ++    W+I+AR Y K GK+E+  +I++      I         E I
Sbjct: 42  QDPSEIVSFLVETKSGKHYWIIMARAYAKLGKLEEAAKIIQSALDSNI------FGSEDI 95

Query: 84  AILNALGVYYTYLGKIETKQREKEEHFI--------LATQYYNKASRIDMHEPSTWVGKG 135
             L +  V+  +  K  +   +K +H +        LAT+ +N      ++  ST + + 
Sbjct: 96  KTLQSFLVWLHF--KYASLGIDKVDHLVEAGTGIADLATRIHNDTQSSPVNSTSTLLSQA 153

Query: 136 QLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGR-YSDSLEFYKRALQVHPS 194
            L L +G  E+A   F  +L+ D++N  ALLG+A    N+ + Y ++L+ Y++ L ++P+
Sbjct: 154 VLSLFQGNDEEALKIFDKILKRDQNNTFALLGKAQAMLNKSKSYGNALKLYQQVLVLNPT 213

Query: 195 CPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVAL-------AVMDLQANE- 246
                RLGIGLC + L     A QA++RAL+LDP N++A + L       A  +  ++E 
Sbjct: 214 TTPDPRLGIGLCCWFLNDEKMAIQAWERALELDPNNLKARIYLNLAHFHRAFNNSWSDEE 273

Query: 247 -AAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALA-VTNHGPTK 304
             +  ++ + ++    +     +  L  LA+++F       VE+L    +  +T      
Sbjct: 274 FVSNYKQCLSELSIIHKSNVSDSTVLLVLASYYFSKNNFETVEKLLRKVVKDITGDDNLS 333

Query: 305 SHSYYNLARSYH----------------SKGDYEKAGLYYMASVKEINKPHEFIFPYYGL 348
               Y+ A  Y                 S+GD+ +A  Y+  ++K +N  +  I    GL
Sbjct: 334 KLITYSKASKYELNVLSECGTWLGRIKFSEGDFIQAAKYFQEAIK-LNDLN--IVAKLGL 390

Query: 349 GQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKA----QELLR---- 400
           GQ Q   G    A   FE +L    +  E   +LG IY +    +K     Q L R    
Sbjct: 391 GQSQYNRGSIDEAALTFESILRSNANCLEANYSLGIIYAKQSSKKKKELAIQALERYIKL 450

Query: 401 ------KAAKID--------PRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEV 446
                  A+K D        P    A++ L  L  ++D   AL     A    K+ G++V
Sbjct: 451 SNNRGISASKNDADFLLNKEPVALNAYLTLSNLYENTDLMQALLYLNKAVEARKQIGKDV 510

Query: 447 PIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQ 506
           P+E+ NNIGV  F K  F+ A ++F+ A         +D       +     +L      
Sbjct: 511 PLEIYNNIGVFQFTKQNFKGALENFQIA---------IDKLDGAEFLSPDGDVL------ 555

Query: 507 LFHRFENDGNHVELPWN-KVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRL 565
                      V+LP + KVT+ FN AR  E  ++  A   +Y+ +L +  +Y  A LR+
Sbjct: 556 -----------VDLPNDLKVTLTFNSARTKELSNEKDALD-MYQSLLSECPNYFSAKLRI 603

Query: 566 AAIAKARNNLQLSIEL---VNEALKVNGKYPNALSMLG--------DLELKND-DWVKAK 613
             ++    +     E+   ++E LK+N       S  G         L LK D D    K
Sbjct: 604 LFLSCISEDGLTPKEIQSEIDELLKLNASDMEVRSFYGWFAKNFGKKLGLKPDADTAFQK 663

Query: 614 ETFRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEA--THLEKAKELYTRVIVQH 671
           ET        D  D YA +SL N  Y    R+ K +   E   T+  +A ELYT+V+   
Sbjct: 664 ETLV----EYDKHDCYALISLANI-YCILARDLKGSSVAEKKRTYYVRATELYTKVLTVD 718

Query: 672 TSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFA 731
             N+YAA G  +V  E  +     D+  +++++      +    V++NL HV      + 
Sbjct: 719 RKNVYAAQGLAIVYIENKESTKGLDILRKIRDS------LNDISVYLNLGHVLCDVKQYG 772

Query: 732 LAMKMYQNCLRKFYYNTDAQILLYLART---HYEAEQWQDCKKSLL----RAIHLA-PSN 783
            A++ Y+  L ++    D QIL +L R       +EQ  +  K+ L    RA +L   S 
Sbjct: 773 KAIENYELALTRYTDGKDVQILTFLGRAWTLRGISEQSLNFFKTALDYTKRAFNLTRGSK 832

Query: 784 YTLRFDAG-VAMQKFSASTLQKT-RRTADEVRSTVAELENAVRVFSHLSAASNLH----- 836
             L F+   +  Q     T Q   +R   ++   +  L  A+     LS+    H     
Sbjct: 833 SALLFNISYIQFQIADFITKQPVQKRQPQDISDAITGLSEAIETLIQLSSDEEKHPPYPK 892

Query: 837 --LHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEAARQAALAEEARRKA- 893
             L G      +T +    + LD  K      E+  +  +Q +E  ++A L +E  R + 
Sbjct: 893 DELRGRANLGSSTLLNRLTNALDETKEDIAEIEQRLETAKQLREKEKEAELQKEQERISA 952

Query: 894 -EEQKKYLLEKRKLEDEQ 910
            +E++  L ++R +  EQ
Sbjct: 953 MKEKEAELAKQRAVLQEQ 970


>gi|2896142|gb|AAC03120.1| Tpr1 [Schizosaccharomyces pombe]
          Length = 1039

 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 239/992 (24%), Positives = 415/992 (41%), Gaps = 146/992 (14%)

Query: 4   VYIPVQNSEEE-VRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQI 62
           + +P+   E++ V +    LP DA+++ +IL  EQAP + W   A EY+ +G  EQ   I
Sbjct: 14  IEVPLLGQEDQSVEIDCSSLPSDATELCEILVNEQAPREFWTKFAHEYYIRGLREQAILI 73

Query: 63  LEEGSSPEIDEYYADVRYERIAILNA-LGVYYTYLGKIETKQRE---KEEHFILATQYYN 118
           L+ G     D        E + ILNA +   Y  + +    +++   ++E          
Sbjct: 74  LKSGLETLKDS-------ESLCILNANIAAIYLSMAREAMLKKDTDLRDEQLRNVRTNLG 126

Query: 119 KASRIDMHEPSTWVGKG--QLLLA---KGEVEQASSAFKIVLEADRDNVPALLGQACVEF 173
            A+ ID       +  G  ++LL    K  +E A+  F  VL+    N+   LG+A + +
Sbjct: 127 GANNIDSKSEINVLLHGIYRILLNPTDKESLENAARCFDFVLQKSGGNILGFLGKARILY 186

Query: 174 NRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPEN--V 231
            +G Y  +   Y+RAL  +P      R+GIGLC + L     A  A+ R  QLDP+N  V
Sbjct: 187 AKGNYRSAFRLYQRALVSNPQFKPDPRIGIGLCFWNLDMKTDALSAWTRVQQLDPKNTVV 246

Query: 232 EALVALAVMDL---QANEAAGIR---KGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 285
           +  + L   DL     N  + ++   K ++ +QRAF+      +A + L  + +    + 
Sbjct: 247 DTYIGLYYYDLAFQNVNNDSFVQNYGKALQHIQRAFKTRNNDPVASSILERYVYSKKNYE 306

Query: 286 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 345
              +L E  +  +      +  YY + R+YH  G+ EKA   Y  + K  +  H  +   
Sbjct: 307 GCIKLAENVIQNSFSSSLIADGYYWMGRAYHQMGNNEKAMASYQKA-KAADDRH--LLSS 363

Query: 346 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQ--IEKAQELLRKAA 403
            G+GQ+Q+   D  SA   FE++ E      E L  LG ++    +  + KA+ LL +A 
Sbjct: 364 VGIGQIQILQNDLTSAKLTFERIAEQNQSCFEALVVLGCLHASDSKPDLTKARMLLDRAF 423

Query: 404 KID-----PR--DAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGV 456
            +      PR  D+  +I    L    DT  +L     A   L+ A   V  E+LNNI V
Sbjct: 424 NLVGSSKLPRVVDSDLYITQARLWEKEDTKKSLGFLTRALDFLESAHMSVGPELLNNIAV 483

Query: 457 IHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGN 516
           + +  G    AH       G+ I       K K+ + DA+  +    D            
Sbjct: 484 LQYHLGLIPEAH-------GNII-------KAKSVLPDANPELSLLLD------------ 517

Query: 517 HVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQ 576
                       +NLAR  E++ +T  AS  Y  IL K+  ++DA +R   +  +  N +
Sbjct: 518 ------------YNLARCEEELGNTSVASEAYVSILEKHPSFIDARIRKCLLQLSNPN-E 564

Query: 577 LSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATD----------GK 626
            + + +   +  + +     + LG        W  +K+  R   D               
Sbjct: 565 ETFKEIRHIMNADSQNLEVRAFLG--------WYLSKQKRRPVEDPEVRHCSQTLRHWHD 616

Query: 627 DSYATLSLGNWNYFAA----LRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAG 682
           D Y+ + LGN     A    + N++   K +  ++ KA + Y + I     N +AA G  
Sbjct: 617 DIYSLVQLGNAYMRQAREFRVHNDREKLKRQKLYI-KAIQSYDQAIKFDPKNAHAAQGIA 675

Query: 683 VVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLR 742
           ++LA+  QF  +  + ++V+EA   +  +      IN+ +       F+ A+++++    
Sbjct: 676 IILAQNRQFSKALLILSKVREAIKDATTL------INIGNCLAELKQFSRAIEVFETVYS 729

Query: 743 KFYYNTDAQILLYLARTHYEAEQWQ---DCKKSLLRAIHLA----PSNYTLRFDAGVAMQ 795
               +    +L  L R   +  +     D  K  +R   LA    P N +L F+  VA  
Sbjct: 730 STGESDTYGVLSCLGRVWLQRGRESKNVDYLKESVRYATLALEKNPENPSLLFN--VAFV 787

Query: 796 KFSASTLQKTR----RTADEVRSTVAELENAVRVFSHLSA-----------------ASN 834
           +F    L + +    RT +++   + +L+ ++  F+ L +                 A N
Sbjct: 788 QFQLCELIRQKPENSRTVEDLNFAMQQLDASIETFTKLVSVEHPPYSPTSIEQRAKMAKN 847

Query: 835 LHLHGFDEKKINTHVEYCKHL---LDAAKIHREAAE-----REEQQNRQRQEAARQAALA 886
                  E+ I   +EY K +   L+ A+I RE  +      EE   +++QE  RQ  L 
Sbjct: 848 TTKRQL-ERAIQAQIEYEKSVAAKLEDARIQREKEKARRLAEEEALLKEKQERERQ--LQ 904

Query: 887 EEARRKAEEQKKYLLEKRKLEDEQKRLRQQEE 918
           EE ++  EE  ++   ++K  ++   L   EE
Sbjct: 905 EERQKMQEEVLEWRKSQQKASEDDMSLSDDEE 936


>gi|294654515|ref|XP_456576.2| DEHA2A05830p [Debaryomyces hansenii CBS767]
 gi|199428943|emb|CAG84532.2| DEHA2A05830p [Debaryomyces hansenii CBS767]
          Length = 1144

 Score =  173 bits (438), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 218/918 (23%), Positives = 398/918 (43%), Gaps = 144/918 (15%)

Query: 6   IPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQILEE 65
           +P+ N +      +++LP D+++++  L+ E  P   W+ +A  Y +  K+ +   +++ 
Sbjct: 24  VPLSNGQIVSINLVEELPEDSNELISFLETENCPKKYWISVATAYAQSNKLNESLNVIK- 82

Query: 66  GSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDM 125
            ++  + ++  + +    + L+ L + +   G        K E+ + AT+  N  S +D 
Sbjct: 83  -TAMGLSQFNNEDKLSFHSYLSWLYLKFVSSG------INKGENLVNATEELNHVSSLDS 135

Query: 126 HEPSTWV--GKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGR-YSDSL 182
            + S  V   K  L L K ++E A   F  +L+ D +N  ALLG+A +  N+ + Y+++L
Sbjct: 136 SKGSVSVLLAKAVLYLYKDQIEPALDIFDRLLKIDNNNCFALLGKAQIILNKTKNYANAL 195

Query: 183 EFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEA--LVALAVM 240
           + Y++ L ++P      R+GIGLC + L     A  +++RAL+LDP N++A  L+ LA  
Sbjct: 196 KLYQQVLILNPLMKPDPRIGIGLCFWFLKDEPMALSSWRRALELDPTNLKAKILLNLANF 255

Query: 241 DLQANEAAGIR-------KGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTET 293
           ++  N + G +       K ++K+   ++     A+ L  LA+++F   ++ LVE++   
Sbjct: 256 NINFNNSLGDKDFQLNYEKCLKKLADNYKENSNDAIILLTLASYYFSKEEYSLVEKICNK 315

Query: 294 AL--------AVTNHGPTK---------SHSYYNLARSYHSKGDYEKAGLYYMASVKEIN 336
            +        +   + P+K         S + + L R   +K D+ ++  Y+  ++K +N
Sbjct: 316 VIHSISGNSASTKLYNPSKVSRFQSNLLSQAAFWLGRVAFAKSDFMQSQKYFHEAIK-LN 374

Query: 337 KPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYV-------QL 389
           + +  +    GLGQ Q+  G    A   +E +L+  P   E   +LG +Y        Q 
Sbjct: 375 ENN--LMAKLGLGQSQINRGSTEEATITYESILKTNPKCLEVNYSLGVLYSNHKSKRKQE 432

Query: 390 GQIEKAQELLRKAAKI------------------DPRDAQAFIDLGELLISSDTGAALDA 431
             I   +  LR A  +                  +P    AF+ L +L  S D   +L  
Sbjct: 433 QGISMLERYLRLAKNMGGQPSNKNEDDGSEIMNQEPVALNAFLILSKLHESKDMNQSLTY 492

Query: 432 FKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTY 491
              A    K+  ++ P+E+ NNIGV +F K  +E+A   F+ A            K KT 
Sbjct: 493 LNKAIESRKQINQDAPLEIYNNIGVFNFIKHNYEAASNIFQTA----------SEKLKT- 541

Query: 492 VIDASASMLQFKDMQLFHRFENDGNHVELPWN---KVTVLFNLARLLEQIHDTVAASVLY 548
                            + F+N+   V +       VT+ FNLAR  E  +++ +  + Y
Sbjct: 542 ----------------CNDFKNENGDVLMDLRDDLNVTISFNLARSKELSNESESIEI-Y 584

Query: 549 RLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSM-LGDLELKN- 606
             +L    +Y  A LRL  +     N     E+  E         N L +   DLE+++ 
Sbjct: 585 ESLLKDCPNYFSAKLRLLFLDCVSTNKSTKEEIKQEV-------ENLLDLNASDLEIRSF 637

Query: 607 DDW-VKA---KETFRAASDAT---------DGKDSYATLSLGNWNYFAALRNEKRAPKLE 653
             W VK    K   +  +D           D  D YA LSL N  Y    R+ K + + E
Sbjct: 638 YGWFVKTFGKKVGMKPDADTNHQKDTLVEYDSHDCYALLSLANI-YCIMARDIKGSSQDE 696

Query: 654 --ATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFV 711
               +  +A EL+T+V+     N+Y A G  +V  E  + +   D+  +++++ +     
Sbjct: 697 KKKKYYIRAVELFTKVLSVDPHNVYGAQGLAIVYIENKESNKGLDILRKIRDSLND---- 752

Query: 712 QMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLART-----------H 760
               V++NL HV      ++ A++ Y+  L +F  N D++IL +L R             
Sbjct: 753 --ISVYLNLGHVLLDLKQYSKAIENYEIALMRF-ANNDSKILSFLGRAWLSRGLTEKNLS 809

Query: 761 YEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSA--STLQKTRRTADEVRSTVAE 818
           Y        +K+L  A     S   LRF+      + +   S L   +R  D+++  +  
Sbjct: 810 YLNNALSYSEKALQNATGAKSS---LRFNMAYIQFQIAEFISKLPVEQRLIDDIKKGIDN 866

Query: 819 LENAVRVFSHLSAASNLH 836
           L  A+   + LS+    H
Sbjct: 867 LNTAIETLNSLSSDDEKH 884


>gi|451999407|gb|EMD91869.1| hypothetical protein COCHEDRAFT_1193487 [Cochliobolus heterostrophus
            C5]
          Length = 1168

 Score =  172 bits (436), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 253/1049 (24%), Positives = 433/1049 (41%), Gaps = 208/1049 (19%)

Query: 14   EVRVALD-QLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQILEEGSSPEID 72
            +V + LD Q+  D +++ DIL+AE++    W+ +A  Y K  ++E    +L++ +     
Sbjct: 27   DVEIPLDDQIQDDPTELCDILEAEKSATSTWVQVAVAYAKHKRIETAIDVLKQAT----- 81

Query: 73   EYYADVRYE-RIAILNALGVYYTYLGKIETKQREKEEHFIL-----------ATQYYNKA 120
            + ++  R + R++ILN  G+ + YL K     R + ++ +            AT   N A
Sbjct: 82   QVFSRARPDDRLSILN--GLCWLYLLKCREAPRVRPQNAVPDTKLKEFWIQSATGVLNDA 139

Query: 121  SRIDMHEPSTWVGKGQLLLAKGEVE-------------------QASSAFKIVLEADRD- 160
            SRI    P  ++ +G L L K  ++                   QA+  F+  L A    
Sbjct: 140  SRISPSHPPLFLARGVLYLLKASLQGPATAAGSTVSPERMETLKQAAKCFEDALRASGGR 199

Query: 161  NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSC--PGAIRLGIGLCRYKLGQLGKARQ 218
            N+ A +G+A V ++ G+++D+L+ Y+  L+  P    P   R+GIG C ++LG   +A  
Sbjct: 200  NLMAKMGKARVNYSMGKWADALKAYQNILETSPDLIDPDP-RIGIGCCFWQLGYKDEAAN 258

Query: 219  AFQRALQLDPENVEALVALAVMDLQ--ANEAAGIRKGMEKMQRAFEIYPYCAMALNYLAN 276
            A+QR+L+L+P +  AL+ L + + Q  AN +    K  E +++A   +   A+ L+   N
Sbjct: 259  AWQRSLELNPRSKVALILLGIYNFQQTANLSTSDPKFAELIKKATGEFIQPALKLD---N 315

Query: 277  HFFFT----GQHFLV-------EQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAG 325
             +  +    G + ++       E +   A+ +T+     S  +Y  A+  H + +   A 
Sbjct: 316  QYPLSCATVGSYLILRRDVNKTEDVARRAIELTDTNAIASDGWYLRAKVAHQQDNIALAA 375

Query: 326  LYYMASVK-EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGH 384
             YY  S +    +   FI   +GL Q+ + + ++  A    EK+L+  P N E    LG 
Sbjct: 376  EYYSKSDQARGGEERGFIPAKFGLAQMNVLMSNYDGAKFRLEKILQQSP-NVEAQTLLGT 434

Query: 385  IYVQ---LGQIEKAQE----LLRKAAKI---------DPR-----DAQAFIDLGELLISS 423
            +Y +     Q  K+ E     L+KA K          DP+     D    ++L  L  + 
Sbjct: 435  LYAEDVFNAQNSKSTEDKSAELKKALKYLESVQSAWKDPKRKVVPDQSVLLNLARLYETE 494

Query: 424  DTGAAL--------------------DAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGE 463
                +L                    +  +    L     E +P ++LNN+G  HF+   
Sbjct: 495  HPERSLKCLEEVEQMEIEAIPQEDYPEGIEEGPELTTALREMLPPQLLNNMGCFHFQAER 554

Query: 464  FESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWN 523
            +  A + F+ AL        ++++ +   ID  A +                        
Sbjct: 555  YVRAQELFQVAL-----TACVNAENRDDTIDTDALV------------------------ 585

Query: 524  KVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVN 583
              ++ FNLAR  E    T  A  +Y  +L ++ DYVDA +RL  +A   N        V 
Sbjct: 586  -TSISFNLARTYEAEGQTDEAKKVYNSLLQRHPDYVDARIRLTYMALKENPQDEGPRAVK 644

Query: 584  EALKVNGKYPNALSMLGDLELKNDDWVKAKETFR----AASD----------ATDGKDSY 629
            +  K N       ++ G        W   K   R    AA D           +D  D Y
Sbjct: 645  DLFKQNEDNVEVRALYG--------WYVNKSKKRTQNFAADDEQRLYKHTLQKSDKHDRY 696

Query: 630  ATLSLGNWNYFAALRNEKRAPKLEATH----LEKAKELYTRVIVQHTSNLYAANGAGVVL 685
            + + +GN  + A  R   R  + +        E+A E + +V+     N YAA G  + L
Sbjct: 697  SLMGMGNI-HLAIAREMPRTSEQDKEKRRKGYERAVEFFDKVLQLDPKNAYAAQGIAIAL 755

Query: 686  AE-KGQFDVSKDLFTQVQEAASG-SVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRK 743
             E K  +  +  +FT+V+E     SVFV       NL H Y     +A A++ Y+  L K
Sbjct: 756  VEDKKDYSTALQIFTKVKETLKDHSVFV-------NLGHTYCEIRQYARAIENYEAALSK 808

Query: 744  FYYNTDAQILLYLARTHYEAEQWQ----------DCKKSLLRAIHLAPSNYTLRFDAGVA 793
              +N D +IL  L R  Y   + +          D  K  L+A   AP++   +F+  VA
Sbjct: 809  NRHN-DPKILACLGRAWYLRAKHERSIAGFRTALDYSKQALKA---APADLNSQFN--VA 862

Query: 794  MQKFSAST----LQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGFD-EKKINTH 848
              +F  +T    L + +RT +EV      L  A+     L+          D   + N  
Sbjct: 863  FVQFQIATMIYSLPEHQRTLEEVDDAATGLTEAIEALEKLAKEETPPFPRADITSRANMG 922

Query: 849  VEYCKHLLDAAKIHREAAEREE----QQNRQRQEAARQAALA----------EEARRKAE 894
                   L+ A+  + A E E      Q R+ +EA +               E+ R+ AE
Sbjct: 923  RNTMIKQLERAREKQAAYEGENATKLDQARRLREAEKLRREEEKKRLEEEALEKKRKYAE 982

Query: 895  EQKKYLLEKRKL-----EDEQKRLRQQEE 918
            EQ++ +   R+L     E+E+KR+   E+
Sbjct: 983  EQERLIQRDRELMEKRNEEERKRMEDDED 1011


>gi|406866076|gb|EKD19116.1| tetratricopeptide [Marssonina brunnea f. sp. 'multigermtubi' MB_m1]
          Length = 1213

 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 253/1059 (23%), Positives = 438/1059 (41%), Gaps = 203/1059 (19%)

Query: 2    ACVYIPVQNSEEE--VRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQF 59
            + + IPVQ  +++  V + L+ L  D +++  +L+ E A    W+ ++  Y KQ KV+  
Sbjct: 35   SAIDIPVQGEDDDQAVEIDLEDLLDDPTELCTLLENEGAARTYWMTVSLAYAKQKKVDHA 94

Query: 60   RQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYL----------GKIETKQREKEEH 109
             ++L +G      +       E++++L  L   Y +           G + ++ + KE +
Sbjct: 95   IEMLLKGG-----QAMKGGPKEKLSMLTCLCWMYLWKSREAPRVAPEGSLSSEAKTKEYY 149

Query: 110  FILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSA------------------- 150
              L+TQ  N+A RI+   P  ++ +G L L K  ++  S +                   
Sbjct: 150  LNLSTQTLNEALRINPGFPPLFLARGVLQLLKASLQPPSKSSAPGALDPEKADILRASAK 209

Query: 151  -FKIVLEADRD-NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS-CPGAIRLGIGLCR 207
             F+  + A +  N+ A+LG++   F+ G+Y++SLE Y+ AL   P       R+GIG C 
Sbjct: 210  SFEDAIRASQGRNMMAVLGKSRALFSLGKYAESLEGYQDALYKMPDLVDPDPRIGIGCCF 269

Query: 208  YKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGI---------RKGM-EKM 257
            + LG    A+ A++RAL+++P++  A + L +  L A+              +K M E  
Sbjct: 270  WMLGYKQDAKVAWERALEINPDSKIANILLGLFYLDASAHVPTNGPEFMQLYKKAMTEYT 329

Query: 258  QRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHS 317
            Q+AF+      +     A +F        VE L+  A+  T+     S  +Y LAR  H 
Sbjct: 330  QKAFKADKNLPLTCATFAGYFLSRKSLPSVETLSHKAIQYTDVNAIASDGWYLLARKEHY 389

Query: 318  KGDYEKAGLYYMASVKEINKPHEFIFP-YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNC 376
            + DY+KA  YY  + +          P  +G  Q+ +  GDF  A    EK+++    N 
Sbjct: 390  EEDYDKAADYYRRADEARGGADRGYLPAKFGAAQLSVLKGDFGEAKLRLEKMIQ-QSKNA 448

Query: 377  ETLKALGHIYVQ---------------------LGQIEKAQELLRKAAKIDPRDAQAFID 415
            E +  LG +Y +                     +G +E  +   + + K    DA   ++
Sbjct: 449  EAMILLGTLYAEEVFQNPTNGPKEEKSLEWKKAVGYLESVRTAWKDSKKNLMPDASVLLN 508

Query: 416  LGELLISSDTGAALDAFKTARTL----------LKKAGEE----------VPIEVLNNIG 455
            L  L        +L   +    L              G+E          +P ++LNNIG
Sbjct: 509  LARLYEGDQPDKSLHCLQQVEQLEFDQIPQSERPTDNGDEAAFKNSMREGLPPQLLNNIG 568

Query: 456  VIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDG 515
              +++  +FE A + F+ AL        + +  K   ID  A +                
Sbjct: 569  CFYYQGEKFEMAREMFQVALS-----ACVKAGEKQEEIDTDALV---------------- 607

Query: 516  NHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNL 575
                      T+ +NL R  E       A+ +Y  +L ++ DY DA  RLA IA  +N  
Sbjct: 608  ---------TTISYNLGRTYEASGLLGEANTVYEGLLERHSDYTDARTRLAYIALRQN-- 656

Query: 576  QLSIELVNEALKVNGKYPNALSML-----GDLELKN-DDWVKAK-ETFRAASDATDGK-- 626
                           + P A+S L      DLE++    W   K  T + A+ A D +  
Sbjct: 657  ------------PTDEGPKAISKLYQDSSADLEVRALYGWYLGKLHTRKRANIAEDPELR 704

Query: 627  ------------DSYATLSLGNWNYFAA--LRNEKRAPKLEATHL-EKAKELYTRVIVQH 671
                        D YA + +GN     A  +R E    K + + +  KA E + + +   
Sbjct: 705  HYKHTLQNYEKHDRYALIGMGNLYLITAREMRRETDQEKQKRSGMYTKAVEFFEKALQLD 764

Query: 672  TSNLYAANGAGVVLAE-KGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNF 730
              N YAA G  + L E K  F  +  +F  V++       V+ P V+INL H++     +
Sbjct: 765  PKNAYAAQGIAIALVEDKKDFKTALSIFVSVRDT------VKDPSVYINLGHIFAELRQY 818

Query: 731  ALAMKMYQNCLRKFYYNTDAQILLYLART---HYEAEQWQDCKKSLL----RAIHLAPSN 783
            + A++ Y+  L K     DAQIL  L RT     +AE+        L    +A+ +AP  
Sbjct: 819  SKAIEHYEQALLKD-RQKDAQILACLGRTWLAKGKAEKNATAFAKALEFSQKALEVAPDQ 877

Query: 784  YTLRFDAGVAMQKFSAS--TLQKTRRTADEVRSTVAELENAVRVFS-------------H 828
               +F+      + + +   L +++R+  E+++    LE A+                  
Sbjct: 878  IHFKFNIAFVQIQLATNVYNLAESQRSLAELQAAATGLEEAIESLEIIARDPQTPYPKHE 937

Query: 829  LSAASNLHLHGFD---EKKINTHVEY-CKHL--LDAAKIHREAAEREEQQNR---QRQEA 879
            +   +N+  +      E+ I    EY  KH   + AAK  RE  +++ +  R   +  E 
Sbjct: 938  VEQRANMARNTMRKQLERSIQAQKEYEEKHAERILAAKRARELEQKKREDVRIAAEEAER 997

Query: 880  ARQAALAEEARRKAEEQKKYLLEKRKLEDEQKRLRQQEE 918
            AR++ +AEE R+K  E+ + L E R   +E++R R+  E
Sbjct: 998  ARKSKIAEE-RQKIAERDRELAEAR---NEEQRAREAAE 1032


>gi|255943779|ref|XP_002562657.1| Pc20g00960 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211587392|emb|CAP85425.1| Pc20g00960 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 1197

 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 226/943 (23%), Positives = 379/943 (40%), Gaps = 162/943 (17%)

Query: 3   CVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQI 62
            + IP  + + EV V+L +LP D +++  +L+ E+A  + W+IIA  Y K+ +++    I
Sbjct: 34  AIDIPASSFDSEVEVSLLELPDDPTELCTLLENEKAAKNFWVIIALAYAKRKQIDHAIDI 93

Query: 63  LEEGSSPEIDEYYADVRYERIAILNAL----------GVYYTYLGKIETKQREKEEHFIL 112
           L +G    +         E++ +L  +                 G++ ++ + K+ +  L
Sbjct: 94  LTKG----LASVAHGATKEKLGLLGWICWMLLLKSRHAPRVAPEGELYSEAKTKDHYLQL 149

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-----------------VEQASSAFKIVL 155
           AT   N+ASR++   P  ++ +G L L +                   VE    A K   
Sbjct: 150 ATSTLNEASRLNPAYPPLFLARGVLCLLRASLYPPRAVRPGAVDTSERVESLRQALKCFD 209

Query: 156 EADR----DNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGA-IRLGIGLCRYKL 210
           E+ +     N+ A+LG+A   +  GRY+D+LE Y++AL   P+      R+G+G C ++L
Sbjct: 210 ESSKAFGGRNIMAILGRARAHYMLGRYADALEGYQKALIKMPNLTDPDPRIGLGCCLWQL 269

Query: 211 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGM----------EKMQRA 260
           G   +A+ A++R+L L+PE+  A V LAV  L  +        M          +  Q+A
Sbjct: 270 GFKDQAKVAWERSLSLNPESKVANVLLAVYYLHDSSRRATTDPMFGSMYKLAMTQYTQKA 329

Query: 261 FEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGD 320
           F++     M  +  A++F    Q+  VE L   A+  T+     S  +Y L R  H +GD
Sbjct: 330 FKLDKEYPMTCSMFASYFLLRKQYPTVETLARKAIEHTDVMSIASDGWYLLGRKSHYEGD 389

Query: 321 YEKAGLYYMASVKEINKPHEFIFP-YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 379
             +A  +Y  S +      +   P  +G  Q+Q+   DF  A    EK+++    N E +
Sbjct: 390 NARAAEFYNRSDQARGGVDKGYLPAKFGAVQMQITNKDFDGAKFRLEKIVQ-QSKNPEAM 448

Query: 380 KALGHIYV-------QLGQIEKAQELLRKA---------------AKIDPRDA------- 410
             L  I+        + G  E      ++A                 I P ++       
Sbjct: 449 TLLAAIHAEEVFAAQKSGSKEDKSTETKRAITLLESVRSMWKDEKQNISPDESVLVYLSR 508

Query: 411 -----------QAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHF 459
                      Q    L ++ I+     A    +    +     E +P ++LNN+G   +
Sbjct: 509 LYEGTAPDKSMQCLTQLEQIQIAEIPEDARPDIEDQEKMNAALRESLPPQLLNNMGCFLY 568

Query: 460 EKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVE 519
           +  +   A   F+ AL        + SK K    D  A +                    
Sbjct: 569 QNDKIALARGLFQSALN-----ACVQSKEKEDGTDTDALV-------------------- 603

Query: 520 LPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSI 579
                 T+ +NL R  E       A  +Y  +L ++ DY +A  RL  IA       L  
Sbjct: 604 -----TTISYNLGRTYEAADMWDEAKKVYEGLLERHSDYTEANARLTYIA-------LRQ 651

Query: 580 ELVNEALKVNGKYPNALSMLGDLELKN-DDWVKAKETFRAASDATDGK------------ 626
              +E  K  GK   A S   +LE+++   W  +K   R A+ A D +            
Sbjct: 652 SPTDEGPKKIGKLYEAEST--NLEVRSLYGWYLSKAKKRVANLAEDSEQRHFKHTLQYYD 709

Query: 627 --DSYATLSLGNWNYFAALRNEKRAPKLEATHLEK----AKELYTRVIVQHTSNLYAANG 680
             D YA   +GN +  AA R+ +R    E     K    A E + + +     N YAA G
Sbjct: 710 KHDRYALTGMGNVHLLAA-RDMRRDTDQEKEKRRKIYQRAVEFFDKALQLDPKNAYAAQG 768

Query: 681 AGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNC 740
             + L      D  KD  + VQ  +     ++ P V++NL HV+     F+ +++ Y+  
Sbjct: 769 IAIAL-----VDDKKDHSSAVQILSKIRDTIKDPSVYLNLGHVFAELRQFSRSIEHYETA 823

Query: 741 LRKFYYNTDAQILLYLARTHY---EAEQWQDCKKSLL----RAIHLAPSNYTLRFDAGVA 793
           L K     D QIL  L R  +   + E      K+ L    RA  +AP    L+F+    
Sbjct: 824 LSKD-RQRDVQILACLGRVWWLRGKQEANLAAMKTALDYATRARDIAPDQLHLQFNVAFV 882

Query: 794 MQKFS--ASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASN 834
             + +  A  LQ T++T  +V+     L+ A+  F  LS   N
Sbjct: 883 QNQIASLAYGLQPTQKTLQDVQEAAEGLKEAIETFERLSKEKN 925


>gi|398392988|ref|XP_003849953.1| Paf1p complex subunit [Zymoseptoria tritici IPO323]
 gi|339469831|gb|EGP84929.1| Paf1p complex subunit [Zymoseptoria tritici IPO323]
          Length = 1216

 Score =  171 bits (434), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 241/1002 (24%), Positives = 420/1002 (41%), Gaps = 174/1002 (17%)

Query: 4   VYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQIL 63
           V I   + +E V + L +   D S++ D+L+ E+A  ++W+ IA  Y KQ   +   +IL
Sbjct: 35  VGIDAGDGDEAVNIDLTEELEDVSELCDLLQNERAARNIWITIAFSYAKQKNADTAIEIL 94

Query: 64  EEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETK--------QREKEEHFILATQ 115
            +G   + D    D    R++IL  L   Y +  +   +        +R KE     AT 
Sbjct: 95  NKGLEAKQDGTNED----RLSILACLCWLYLWKCRRAPRVKPLPPADERNKEYWLAAATS 150

Query: 116 YYNKASRIDMHEPSTWVGKGQLLLAKGEVE------------------QASSAFKIVLEA 157
             N+ASRI+   P  ++ +G   L +  ++                  QA   F     A
Sbjct: 151 TVNEASRINPSYPPLYLARGTAHLLRASLQPVKYGPGSEHSDRNDTLKQAIRCFDDAYRA 210

Query: 158 -DRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSC--PGAIRLGIGLCRYKLGQLG 214
            ++ NV A++G+A  +F+ G+++++   Y++ L   P    P   R+GIG C ++LG   
Sbjct: 211 SNQKNVMAIVGKAKAQFSMGKFAEAYVLYQQVLDRAPDMIDPDP-RIGIGCCLWQLGHKE 269

Query: 215 KARQAFQRALQLDPENVEALVALAVMDL--------QANEAAGI-RKGMEK-MQRAFEIY 264
            A+ A+ RAL L+  +V A + L +  L         + E A I +K M   +Q AF++ 
Sbjct: 270 NAKDAWTRALALNKVSVGANILLGLYHLDEGSHHNSNSPEFADIYKKAMTTYIQTAFKLD 329

Query: 265 PYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 324
              AM  +    +F        V++L + A+  T+ G   S  +Y LAR  H +GD  KA
Sbjct: 330 DMQAMTCSTFGQYFLGRKNWANVDRLAKRAIERTDVGTIASDGWYLLARKDHYEGDLAKA 389

Query: 325 GLYYMASVKEINKPHEFIFPY-YGLGQVQLKLGDFRSALTNFEKVLE------------- 370
             +Y  + +      +   P  +G+ Q++  + D+  A    EK++              
Sbjct: 390 QEHYSKADQARGGDDKGFLPAKFGVAQLKTLMNDYDGAKFRLEKMVSTNKSVEALTLLGI 449

Query: 371 IYPDNCETLKALGHIYVQLGQIEKAQELLRKA--------AKIDPRDAQAFIDLGELLIS 422
           ++ ++  T +A G    +  + +KA  LL +          KI P D+   ++L  L  S
Sbjct: 450 LHAEDVYTSQAAGSREDKSSERKKAIALLEQVRVAWKDGKKKISP-DSSVLLNLARLYES 508

Query: 423 SDTGAALDAFKTARTLL--KKAGEEVPIEV-------------------LNNIGVIHFEK 461
                AL   +    +   + + E++P E+                   LNNIG  HF+ 
Sbjct: 509 DQPDKALACLEQVEQMEIDEISDEDLPEEIEEDEAAVRSAKRDMLSPQLLNNIGCFHFQA 568

Query: 462 GEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELP 521
            ++  A Q F+ AL   + +   D    T   DA  S                       
Sbjct: 569 EKYPLARQDFQAALRSSVAIGNKDESVDT---DALVS----------------------- 602

Query: 522 WNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAI------AKARNNL 575
               T+ +NLAR  E       A  +Y  +L K+ DY+DA  R+A I      A+  N +
Sbjct: 603 ----TISYNLARTYEAEGMEDDAQKIYSSLLEKHPDYIDARARVAYITLHTDPAEGANAI 658

Query: 576 QLSIELVNEALKVNGKYPNALSMLGDLELK-NDDWVKAKETFRAASDATDGKDSYATLSL 634
           +  +E   + L++   Y   ++      L+ N+D  + +  ++      D  D Y+   L
Sbjct: 659 KSLLESEPDNLEIRALYGWYINRNKKRTLQLNED--QEQRHYKHTLMEKDKHDIYSLTGL 716

Query: 635 GNWNYFAALRNEKRAPKLEATHLEK-------AKELYTRVIVQHTSNLYAANGAGVVLAE 687
           GN +   A    + +P+    H E+       A E + +V+     N +AA G G+ + E
Sbjct: 717 GNLHLAVA----RESPRDTDQHKERRSKTYMRAIEFFDKVLTLDPKNAFAAQGMGIAMVE 772

Query: 688 -KGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYY 746
            K     +  +F++V+E+      ++ P V INL HV+     F+ A++ Y+  L K   
Sbjct: 773 EKKDTSAAVQIFSRVRES------IKDPSVHINLGHVFCDLKQFSRAIENYELALAK-SR 825

Query: 747 NTDAQILLYLART---HYEAEQWQDCKKSLL----RAIHLAPSNYTLRFDAG-----VAM 794
           + D Q +  L R       AE+  +  K+ L    +A+  AP N + +F+       +A 
Sbjct: 826 DADPQTMACLGRAWLMRGRAEKNLEAFKTSLDYSEQAVKEAPDNISFKFNVAFVRMLIAQ 885

Query: 795 QKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGFD-EKKINTHVEYCK 853
           Q  +   L +  +T  +V + V  L+ A+  F+ ++ + N      D E++ N      K
Sbjct: 886 QMIA---LPEADKTLSDVETAVTGLDLAIESFTEIAKSPNAPFPRHDIEQRANMGRNTMK 942

Query: 854 HLL--------DAAKIH----REAAEREEQQNRQRQEAARQA 883
             L        D  + H     EA +R E +  +RQE  R A
Sbjct: 943 RQLATTVDKQADYERKHATRLDEARKRREAEIAKRQEEKRIA 984


>gi|336264871|ref|XP_003347211.1| hypothetical protein SMAC_08103 [Sordaria macrospora k-hell]
 gi|380087904|emb|CCC13982.1| unnamed protein product [Sordaria macrospora k-hell]
          Length = 1280

 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 245/1008 (24%), Positives = 431/1008 (42%), Gaps = 183/1008 (18%)

Query: 2   ACVYIPVQNSEEE-VRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFR 60
           + + IPVQ+ ++E V + L+ L  D +++  + + E A    W+ ++  Y KQ K++   
Sbjct: 39  STIDIPVQDQDDEAVEIDLEVLADDPTELCTLFEMEGAARTYWMTVSLAYAKQKKIDFAI 98

Query: 61  QILEEGSSPEIDEYYADVRYERIAILNALGVYYTYL----------GKIETKQREKEEHF 110
           ++L +G+    +   A+   E+++I+ AL   Y +           G + ++ + KE + 
Sbjct: 99  EMLIKGA----NAMQANNPREKLSIVTALCWMYLWKSREAPRVAPEGALVSEAKTKEYYL 154

Query: 111 ILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQAS---------------SAFKIVL 155
            LATQ  N+ASRI+   P  ++ +G L L +  ++  S               +A K   
Sbjct: 155 QLATQSLNEASRINPAFPPLFLARGVLQLLRASLQPPSKAPGAVDPEKTETLRAALKSFD 214

Query: 156 EADR----DNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSC--PGAIRLGIGLCRYK 209
           +A R    +N+ A++G+A   F+  RY+D+L  Y+ AL   P    P   R+GIG C ++
Sbjct: 215 DALRVSSGENMLAVIGKARALFSLSRYADALAAYQDALARAPDLVDPDP-RIGIGCCFWQ 273

Query: 210 LGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGI---------RKGM-EKMQR 259
           LG    AR A++RAL+++ E+    + L +  L A+    I         +K M E  Q+
Sbjct: 274 LGYKDDARIAWERALEINAESKVGNILLGLYYLDASGHVPINSPEFIRLYKKAMTEYTQK 333

Query: 260 AFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 319
           ++++     +     A++F    Q   VE L   A+  T+     S  +Y LAR  H   
Sbjct: 334 SYKLDKDLPLTCATFASYFLSRKQFDHVEALAHKAIQFTDVNAIASDGWYLLARKEHYAN 393

Query: 320 DYEKAGLYYMASVKEINKPHEFIFP-YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCET 378
           + E+A  YY  +            P  +G  Q+ +   D   A    EK+++    N E 
Sbjct: 394 NLERAADYYRRADDARGGTERGYLPAKFGAAQLSVIKNDLGEAKLRLEKMIQ-QAKNYEA 452

Query: 379 LKALGHIYVQ--------------LGQIEKAQELLR--KAAKIDPR-----DAQAFIDLG 417
           +  LG++Y +                + +KA  LL   ++A  DP+     DA   ++L 
Sbjct: 453 MILLGNLYAEEVFANQYAPVKEDKSAEAKKAIGLLESVRSAWKDPKKSLAPDAAVLLNLA 512

Query: 418 ELLISSDTGAALDAFKTARTL-------------------LKKAGEE-VPIEVLNNIGVI 457
            L  + +   AL   +    L                   +K A    +P ++LNNIG  
Sbjct: 513 RLYETENPDKALQCLQQVEQLELDQVPHSERPDEVEGEAAIKAALRRFLPPQLLNNIGCF 572

Query: 458 HFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNH 517
           ++++ + E A + F+ AL   I +   +  T T  +                        
Sbjct: 573 YYQEEKHELASELFEAALSSCIRIGEKNDDTDTDAL------------------------ 608

Query: 518 VELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQL 577
                   T+ FNL R  E    +  A  +Y  +L ++ DYVDA  RLA I K RNN   
Sbjct: 609 ------VTTISFNLGRSYEARGMSDKAVEVYEGLLKRHDDYVDARTRLAYI-KLRNN--- 658

Query: 578 SIELVNEALKVNGKYPNALSML-----GDLELKN-DDWVKAKETFRA-----ASDAT--- 623
                        + P+A++ L      DLE++    W   K + R      A D     
Sbjct: 659 ---------PGTKEGPDAVAKLYQENSSDLEVRALYGWFLGKLSSRKRPSNIAEDPEQRH 709

Query: 624 --------DGKDSYATLSLGNWNYFAA--LRNEKRAPKLE-ATHLEKAKELYTRVIVQHT 672
                   D  D YA + +GN +  +A  +R E  A + + +    +A E + + +    
Sbjct: 710 YKHTLQNYDKHDRYALVGMGNLHLISAREMRRETEADRQKRSAAYSRAVEFFDKALQLDP 769

Query: 673 SNLYAANGAGVVLAE-KGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFA 731
            N YAA G  + L E K  +  +  +F +V+E       ++   V++NL H+Y     F 
Sbjct: 770 KNAYAAQGIAIALVEDKKDYKGALQIFIKVRET------IKDVHVFVNLGHIYAELKQFT 823

Query: 732 LAMKMYQNCLRKFYYNTDAQILLYLART---HYEAEQWQDCKKSLL----RAIHLAPSNY 784
            A++ Y+  L K     DA IL  L RT      AE+  D  K+ L    + + +AP   
Sbjct: 824 KAIESYEIALGKEGKAKDANILSCLGRTWLNKGRAERNLDAYKTALEYAQKTLEVAPEQV 883

Query: 785 TLRFDAGVAMQKFSA--STLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGFD- 841
             +F+      + ++  + L + +RT+ ++    + LE+A+     ++A+ +      D 
Sbjct: 884 HFKFNVAFVQIQLASFINGLPEHQRTSTQLEEAASGLESAITALDEIAASDHPPYPKHDI 943

Query: 842 EKKINTHVEYCKHLLDAAKIHREAAERE-EQQNRQRQEAA---RQAAL 885
           E++ N      +  L+ A     A++RE E +N+++ + A   RQAAL
Sbjct: 944 EQRANMARNTQRKQLERAL----ASQREYESKNKEKLQVALEQRQAAL 987


>gi|400599130|gb|EJP66834.1| RNA polymerase II-associated protein [Beauveria bassiana ARSEF 2860]
          Length = 1198

 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 245/1030 (23%), Positives = 441/1030 (42%), Gaps = 154/1030 (14%)

Query: 2    ACVYIPVQNSEEE--VRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQF 59
            + + IPVQ  +E+  V + L+ L  D +++  + + E A    W+ +A  Y KQ K++  
Sbjct: 31   SAIDIPVQGDQEDEAVEIDLEDLVDDPTELCTLFENEHAAKTYWMTVALAYAKQHKIDHA 90

Query: 60   RQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGK---------IETKQREKEEHF 110
             ++L  G    I    ++ R ++++++  L   Y +  +         +   + + +EH+
Sbjct: 91   IEMLLRGGGA-IQSNASNPR-DKVSMICCLCWMYLWKSREAPRVAPDGVRLSEAKTKEHY 148

Query: 111  I-LATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQAS---------------SAFKIV 154
            + LAT   N A+R++   P  ++ +G LLL +  ++  S               +A K  
Sbjct: 149  LQLATSSLNDAARLNPSFPPIFLARGVLLLLRASLQAPSKTAGGIGTEKQELLKTAVKSF 208

Query: 155  LEADR----DNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSC--PGAIRLGIGLCRY 208
             +A R     N+ AL+G+A   F++ +Y DSL  Y+  LQ  P    P   R+GIG C +
Sbjct: 209  DDALRVSQGKNMLALMGKARAFFSQQKYPDSLAIYQDVLQKKPDLVDPDP-RIGIGCCFW 267

Query: 209  KLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGI---------RKGM-EKMQ 258
            +LG    A+ A++R+L+++P++    + L +  L A+    +         +K M E  Q
Sbjct: 268  QLGFKKDAKTAWERSLEINPDSKVPNILLGLYYLDASGHVPVNSEDFVKLYKKAMTEYTQ 327

Query: 259  RAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSK 318
            ++F++     +  +  +N+F         ++L   A+  T+     S  +Y LAR  H  
Sbjct: 328  KSFKLDKNLPLTCSTFSNYFLSRKSWDNADKLAHKAIQYTDVNAIASDGWYVLARKAHYN 387

Query: 319  GDYEKAGLYYMASVKEINKPHEFIFP-YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCE 377
            GD + A  +Y  +           FP  +G  Q+ +   D   A    EK+++    + E
Sbjct: 388  GDTDNANDFYRRADDARGGTDTGYFPAKFGAAQLSVLKNDLGEAKLRLEKMIQ-QSKSHE 446

Query: 378  TLKALGHIYVQ--------------LGQIEKAQELL---RKAAKIDPR-----DAQAFID 415
             +  LG +Y +                +++KA  LL   R A K DP+     DA   ++
Sbjct: 447  AMILLGTLYAEEIFASQTSDVKEDKSAEMKKAINLLEAVRNAWK-DPKRNASPDASVLLN 505

Query: 416  LGELLISSDTGAALDAFKTARTL----------LKKAGEE----------VPIEVLNNIG 455
            L  L  + +   AL   +    L           +   EE          +P ++LNNIG
Sbjct: 506  LARLYETENPEKALQCLQQVEQLELEQIPTSEYPEGVTEEAEVQAAIRKFLPPQLLNNIG 565

Query: 456  VIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDG 515
              HF+  +   A + F+ ALG  + ++  D    T  + +S S                 
Sbjct: 566  CFHFQAEKHVLASEMFEAALGACMKMSEKDGTVDTDALVSSIS----------------- 608

Query: 516  NHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNL 575
                         FNL R  E    +  A  +Y  +L ++ DY DA  RLA I   ++  
Sbjct: 609  -------------FNLGRSYEAQGLSDKAVEVYEGLLNRHDDYTDARARLAYIKLRQSPN 655

Query: 576  QLSIELVNEALKVNGKYPNALSM----LGDLELKNDDWVKAKETFRAASDAT---DGKDS 628
            +   + V +  + N       ++    LG +  K    V     FR         D  D 
Sbjct: 656  KEGPDAVAKLYQENTSDVEVRALYGWYLGKVSRKRPGNVAEDPEFRHYKHTLQNYDKHDR 715

Query: 629  YATLSLGNWNYFAA--LRNEKRAPKLE-ATHLEKAKELYTRVIVQHTSNLYAANGAGVVL 685
            YA + +GN +   A  +R E  A K + +    KA E + + +     N YAA G  + L
Sbjct: 716  YALVGMGNLHMMQAREMRRETDADKQKRSAAYGKAVEFFEKALSLDPKNAYAAQGVAIAL 775

Query: 686  AE-KGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKF 744
             E K  +  +  +F +V+E       ++ P++++NL H+Y     F+ A++ Y+  L K 
Sbjct: 776  VEDKKDYKNALAIFNKVRET------IKEPNLYVNLGHIYAELKQFSKAIESYEIALSKE 829

Query: 745  YYNTDAQILLYLART---HYEAEQWQDCKKSLL----RAIHLAPSNYTLRFD-AGVAMQK 796
                +  IL  L RT      AE+  D     L    +A+ +AP     +F+ A V +Q 
Sbjct: 830  GKQNEPVILACLGRTWLNRGRAERDIDAYSKALECAEKALKVAPEQIHYKFNVAFVQIQL 889

Query: 797  FSA-STLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGFD-EKKINTHVEYCKH 854
             +A   +++ +RTA+++      LE A+     ++A         D E++ N      + 
Sbjct: 890  VTAIQGIEENKRTAEQLEKAAEGLEAAIESLDAIAAHPQTPYPKHDVEQRANMARNTLRK 949

Query: 855  LLDAAKIHREAAEREEQQNRQRQEAARQAALAEEARRKAEEQKKYLLEKRKLEDEQKRLR 914
             L+ A I ++  +  E+ N+++  AA+    AE  RR+A+  +  +L K K E + K  +
Sbjct: 950  QLERA-IGKQ--KEWEEVNKEKIAAAKSQREAEIKRREAD--RAEVLAKEK-ERQDKIRK 1003

Query: 915  QQEEHFQRVK 924
            ++EE   +VK
Sbjct: 1004 EREEMAAKVK 1013


>gi|85083950|ref|XP_957219.1| hypothetical protein NCU00095 [Neurospora crassa OR74A]
 gi|28918307|gb|EAA27983.1| hypothetical protein NCU00095 [Neurospora crassa OR74A]
          Length = 1279

 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 243/1025 (23%), Positives = 430/1025 (41%), Gaps = 198/1025 (19%)

Query: 2   ACVYIPVQNSEEE-VRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFR 60
           + + IPVQ+ ++E V + L+ L  D +++  + + E A    W+ ++  Y KQ K++   
Sbjct: 39  STIDIPVQDQDDEAVEIDLEVLADDPTELCTLFEMEGAARTYWMTVSLAYAKQKKIDFAI 98

Query: 61  QILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGK----------IETKQREKEEHF 110
           ++L +G+    +   A+   E+++I++AL   Y +  +          + ++ + KE + 
Sbjct: 99  EMLIKGA----NAMQANNPREKLSIVSALCWMYLWKSREAPRVAPEDALVSEAKTKEYYL 154

Query: 111 ILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSA-----------FKIVLEADR 159
            LATQ  N+ASRI+   P  ++ +G L L +  ++  S A            +  L++  
Sbjct: 155 QLATQSLNEASRINPAFPPLFLARGVLQLLRASLQPPSKAPGAVDPEKTETLRAALKSFD 214

Query: 160 D--------NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSC--PGAIRLGIGLCRYK 209
           D        N+ A++G+A   F+ GRY+D+L  Y+ AL   P    P   R+GIG C ++
Sbjct: 215 DALRVSSGKNMLAVIGKARALFSLGRYADALVAYQDALARAPDLVDPDP-RIGIGCCFWQ 273

Query: 210 LGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGI---------RKGM-EKMQR 259
           LG    AR A++RAL+++ E+    + L +  L A+    I         +K M E  Q+
Sbjct: 274 LGYKDDARIAWERALEINAESKVGNILLGLYYLDASGHVPINSPEFIKLYKKAMTEYTQK 333

Query: 260 AFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 319
           ++++     +     A++F    Q   VE L   A+  T+     S  +Y LAR  H   
Sbjct: 334 SYKLDKDLPLTCATFASYFLSRKQFDHVEALAHKAIQFTDVNAIASDGWYLLARKEHYAN 393

Query: 320 DYEKAGLYYMASVKEINKPHEFIFP-YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCET 378
           + E+A  YY  +            P  +G  Q+ +   D   A    EK+++    N E 
Sbjct: 394 NLERAADYYRRADDARGGTERGYLPAKFGAAQLSVIKNDLGEAKLRLEKMIQ-QSKNYEA 452

Query: 379 LKALGHIYVQ--------------LGQIEKAQELLR--KAAKIDPR-----DAQAFIDLG 417
           +  LG++Y +                + +KA  LL   + A  DP+     DA   ++L 
Sbjct: 453 MILLGNLYAEEVFANQFAPVKEDKSAEAKKAISLLESVRTAWKDPKKSLAPDAAVLLNLA 512

Query: 418 ELLISSDTGAALDAFKTARTL------LKKAGEEV--------------PIEVLNNIGVI 457
            L  + +   AL   +    L        +  +EV              P ++LNNIG  
Sbjct: 513 RLYETENPDKALQCLQQVEQLELDQVPQSERPDEVEGEAAIKAALRRFLPPQLLNNIGCF 572

Query: 458 HFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNH 517
           ++++ + E A + F+ AL   + +   D  T T  +                        
Sbjct: 573 YYQEEKHELASELFEAALSSCMRIGEKDDDTDTDAL------------------------ 608

Query: 518 VELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQL 577
                   T+ FNL R  E    +  A  +Y  +L ++ DY DA  RLA I K RNN   
Sbjct: 609 ------VTTISFNLGRSYEARGMSEKAVEVYEGLLKRHDDYTDARTRLAYI-KLRNN--- 658

Query: 578 SIELVNEALKVNGKYPNALSML-----GDLELKN-DDWVKAKETFRA-----ASDAT--- 623
                        + P+A++ L      DLE++    W   K + R      A D     
Sbjct: 659 ---------PGTKEGPDAVAKLYQENSSDLEVRALYGWFLGKLSSRKRPNNIAEDPEQRH 709

Query: 624 --------DGKDSYATLSLGNWNYFAA--LRNEKRAPKLE-ATHLEKAKELYTRVIVQHT 672
                   D  D YA + +GN +  +A  +R E  A + + +    +A E + + +    
Sbjct: 710 YKHTLQNYDKHDRYALVGMGNLHLISAREMRRESEADRQKRSAAYSRAVEFFDKALQLDP 769

Query: 673 SNLYAANGAGVVLAE-KGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFA 731
            N YAA G  + L E K  +  +  +F +V+E       ++   V++NL H+Y     F 
Sbjct: 770 KNAYAAQGIAIALVEDKKDYKGALQIFIKVRET------IKDVHVFVNLGHIYAELKQFT 823

Query: 732 LAMKMYQNCLRKFYYNTDAQILLYLART---HYEAEQWQDCKKSLL----RAIHLAPSNY 784
            A++ Y+  L K     DA IL  L RT      AE+  D  K+ L    + + +AP   
Sbjct: 824 KAIESYEIALGKEGKAKDANILSCLGRTWLNKGRAERNLDAYKTALEYAQKTLEVAPEQV 883

Query: 785 TLRFDAGVAMQKFSA--STLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGFDE 842
             +F+      + ++  + L + +RT+ ++    + LE+A+     ++A+          
Sbjct: 884 HFKFNVAFVQIQLASFINGLPEHQRTSTQLEEAASGLESAITALDEIAASD--------- 934

Query: 843 KKINTHVEYCKHLLDA-AKIHREAAEREEQQNRQRQEAARQAALAEEARRKAEEQKKYLL 901
                H  Y KH ++  A + R         N QR++  R  A   +   K +E+ +  L
Sbjct: 935 -----HPPYPKHDIEQRANMAR---------NTQRKQLERALASQRDYESKNKEKLQLAL 980

Query: 902 EKRKL 906
           E+R++
Sbjct: 981 EQRQV 985


>gi|440639555|gb|ELR09474.1| hypothetical protein GMDG_00656 [Geomyces destructans 20631-21]
          Length = 1257

 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 246/1049 (23%), Positives = 439/1049 (41%), Gaps = 199/1049 (18%)

Query: 6    IPVQNSEEE----VRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQ 61
            IPVQ  +E+    V V L+ L  D +++  +L+ E+   + W+ ++  Y KQ K++   +
Sbjct: 44   IPVQGMDEDDQQAVEVDLEDLLDDPTELCTLLENERVSRNFWMTVSLAYAKQKKIDTAIE 103

Query: 62   ILEEG-----SSPEIDEYYADVRYERIAILNALGVYYTYL----------GKIETKQREK 106
            +L +G       P+          E++++L  L   Y +           G++ ++ + K
Sbjct: 104  MLGKGLAAVTGGPK----------EKLSMLTCLCWLYLWKSREAPRVAPEGQMVSEAKTK 153

Query: 107  EEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSA-------------FKI 153
            E +  L+T   N A+RI+   P  ++ +G L L +  ++  S A              + 
Sbjct: 154  EFYLQLSTTALNDATRINPSFPPLFMARGVLYLLRASLQPPSKAPAAGTIDPEKLDILRH 213

Query: 154  VLEADRD--------NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGA-IRLGIG 204
             L++  D        N+ A+LG+  V+F+ G+Y+++LE Y+ AL   P       R+GIG
Sbjct: 214  ALKSFDDAIRVSQGRNMLAVLGKCRVQFSLGKYAEALEGYQLALSRMPELTDPDPRIGIG 273

Query: 205  LCRYKLGQLGKARQAFQRALQLDPENVEA--LVALAVMDLQANEAAGIRKGMEKMQRAFE 262
             C + LG  G A+ A++RAL+++  +  A  L+ L  +D   +     +  +E  ++A  
Sbjct: 274  ACLWMLGHKGDAKVAWERALEVNENSKIANILLGLYHLDASGHVPTNSKDFIETYKKAMT 333

Query: 263  IYPYCAMALN--------YLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARS 314
            +Y   A  L+          A +F         + L   A+  T+     S  +Y LAR 
Sbjct: 334  VYTQKAFKLDKDLPLTCSTFAGYFLSRKSLANTDALAHKAIQYTDVNAIASDGWYLLARK 393

Query: 315  YHSKGDYEKAGLYYMASVKEINKPHEFIFP-YYGLGQVQLKLGDFRSALTNFEKVLEIYP 373
             H + + ++A  YY  S +          P  +G  Q+ +   DF  A    EK+++ + 
Sbjct: 394  EHYEDNVDRAADYYRRSDEARGGADRGYVPAKFGSAQISVLKSDFGEAKFRLEKIVQ-HS 452

Query: 374  DNCETLKALGHIYV------QLG--------QIEKAQELLR--KAAKIDPR-----DAQA 412
             N E +  LG IY       Q G        + +KA  LL   +AA  DP+     DA  
Sbjct: 453  KNVEAMSLLGTIYSEEVFANQYGASNEDKTQEFKKAVSLLESVRAAWKDPKKNLIPDASV 512

Query: 413  FIDLG---------------------ELLISSDTGAALDAFKTARTLLKKA-----GEEV 446
             ++L                      EL  +     ALD  K   T  ++A      E +
Sbjct: 513  LLNLARLYEVDNPEKSVLCLQQIEQIELAQAQAQAQALDEDKATDTEAEEAMKLKIRENL 572

Query: 447  PIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQ 506
            P ++LNN+G  H++  +F+ +   F+ AL        + +  +   +D  A +       
Sbjct: 573  PPQLLNNMGCFHYQAEKFDLSRDFFQAALS-----ACVKAGEREEAMDTDALV------- 620

Query: 507  LFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLA 566
                               ++ FNL R  E       A  +Y  +L ++ DY DA  RLA
Sbjct: 621  ------------------TSISFNLGRTYEASGMFDEAKTVYEGLLGRHADYTDARTRLA 662

Query: 567  AIAKARNNLQLSIELVNEALKVNGK-YPNALSMLGDLELKN-DDWVKAKETFRAASDAT- 623
             IA       L     +E  +  GK Y +A +   DLE++    W   +   R  + A+ 
Sbjct: 663  YIA-------LKESPTDEGPRAIGKLYQDASN---DLEVRALYGWYLGRVHSRKRASASH 712

Query: 624  -----------------DGKDSYATLSLGNWNYFAALRNEKRAPKLE----ATHLEKAKE 662
                             D  D YA + +GN  Y    R   R    E    ++   KA E
Sbjct: 713  IHEDPELRHYKHTLQHHDKHDRYALIGMGNL-YLQTAREMPRNSDSERAKRSSMYSKAAE 771

Query: 663  LYTRVIVQHTSNLYAANGAGVVLAE-KGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLA 721
             + + +     + +AA G  + + E K  F  +  +F QV+E       V+ P+V+INL 
Sbjct: 772  FFEKALQLDPKSAFAAQGIAIAMIEDKKDFKGALSIFMQVRET------VKDPNVYINLG 825

Query: 722  HVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLART-------HYEAEQWQDCKKSLL 774
            H++     ++ A++ Y+  L K    +DAQIL  L RT         + + +++  +   
Sbjct: 826  HLFAELRQYSKAIEHYEAALSK-NSGSDAQILACLGRTWLARGRAEKDLKSYKNALEYAQ 884

Query: 775  RAIHLAPSNYTLRFDAGVAMQKFSAS--TLQKTRRTADEVRSTVAELENAVRVFSHLSA- 831
            +A+  AP     +F+      + + +  T  ++ RT  EV +  A LE+A+     ++  
Sbjct: 885  KALETAPEQIHFKFNVAFVQIQLAQTIYTTAESARTLAEVEAAAAGLEDAIVSLEEIAQH 944

Query: 832  ASNLHLHGFDEKKINTHVEYCKHLLD-AAKIHREAAEREEQQNRQRQEAARQAALA--EE 888
                +     E + N      +  L+ + +  RE  E+ +++ R+  E  RQ  L   EE
Sbjct: 945  PQTPYPKALVEGRANMARNTMRKQLERSIQSQREYEEKNKEKVREAME-VRQRELKEREE 1003

Query: 889  ARRKAEEQKKYLLEKRKLEDEQKRLRQQE 917
            AR KAEE+++    KR + +E+ ++ + +
Sbjct: 1004 ARLKAEEEQRE--RKRVIAEERAKIAEHD 1030


>gi|413922693|gb|AFW62625.1| hypothetical protein ZEAMMB73_497393 [Zea mays]
          Length = 454

 Score =  170 bits (430), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 80/114 (70%), Positives = 99/114 (86%)

Query: 812 VRSTVAELENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQ 871
           VR+TV +L+NA+RVFS LS AS  H HGFDE+KI THVEYCKHLLDAAK+HR+AAE+ EQ
Sbjct: 31  VRATVTKLQNAIRVFSLLSVASTYHSHGFDERKIETHVEYCKHLLDAAKVHRDAAEQAEQ 90

Query: 872 QNRQRQEAARQAALAEEARRKAEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVKA 925
           QN+Q+ E ARQ ALA+EARR+AEEQ+K+ LE+R+ EDE K+++QQEEHFQRVK 
Sbjct: 91  QNKQKMEVARQIALADEARRRAEEQRKFQLERRREEDELKQVKQQEEHFQRVKG 144


>gi|320582772|gb|EFW96989.1| Component of the Paf1p complex [Ogataea parapolymorpha DL-1]
          Length = 1050

 Score =  170 bits (430), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 234/979 (23%), Positives = 419/979 (42%), Gaps = 121/979 (12%)

Query: 4   VYIPVQNSEEEVRV-ALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQI 62
           + IP++   EEV +  +  LP D+S++  +L  E++    WL++A+ Y  QGK+++   +
Sbjct: 39  ITIPLKEEGEEVVIDTISDLPEDSSELCALLTNEESSTKHWLVVAKAYASQGKIDESLNV 98

Query: 63  LEEG-SSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKAS 121
           ++    SP I +   DV+      L  L  Y T  GK           + LAT+    A 
Sbjct: 99  IKNALDSPTIMDATGDVQSTLHGFLAWL--YLTREGK-----NSGLISYELATKETETAL 151

Query: 122 RIDMHEPSTWVGKGQLLLA-------KGEVEQASSAFKIVLEADRDNVPALLGQACVEFN 174
            +D     T + +  LLL+       +   E+ S     +L+ +  N  AL+ +A + F 
Sbjct: 152 SLDPTNELTLMSQALLLLSSDKQKSKQTNFEKESRLLDSLLKKNPKNCFALMAKAKIFFY 211

Query: 175 RGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPE-NVEA 233
           +  Y  +L+ ++R L ++P      R+GIG+C + LG+   A QA+Q ++Q++PE N+EA
Sbjct: 212 KENYVAALKVFQRCLLLNPLLRPDPRIGIGMCYWMLGRKKLANQAWQNSIQVNPEKNLEA 271

Query: 234 --LVALAVMDLQANEAAGIRKGMEKMQRAFEIY-------PYCAMALNYLANHFFFTGQH 284
             L+++A  D     +       EK   A E         P   + L  LA+ +F    +
Sbjct: 272 KILISIAKFDDCFTNSVSDADFKEKYALALEFTKASLIDDPTNGVILLILASFYFSKQDY 331

Query: 285 FLVEQLTETALAVTN-HGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIF 343
            LV+++ +     T      KS ++  LAR   ++ D  +A   + +S+K  N+ +  + 
Sbjct: 332 ALVQKICDKVSKDTRFSNRIKSDAFLWLARCKFTQNDVLEAQKLFSSSIK-YNENN--LL 388

Query: 344 PYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQ-LGQIEKAQELLRKA 402
             YG GQ  +       A+  FEK+ E +P   E   ALG +Y +   Q +KA   L K 
Sbjct: 389 SRYGYGQCLIVRNQINDAIRAFEKLQESHPRVLEVTLALGMLYSRNPKQTDKATTFLEKY 448

Query: 403 AKI-----DPRDAQAFIDLGELLISSDTGAALD---AFKTARTLLKKAGEEVPIEVLNNI 454
             +     +P ++ A I L  +    D   +L      K       K   ++   +LNNI
Sbjct: 449 VSLAKEHKEPLNSAALITLARIYEEKDISQSLKYLMMLKDQEISSGKTESDLSYALLNNI 508

Query: 455 GVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFEND 514
           GV+   K E            GD +          +Y  +A  ++   K+         +
Sbjct: 509 GVLGLLKNE------------GDSL----------SYFENALKALESQKE---------E 537

Query: 515 GNHVELPWNKVTVL--FNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLR---LAAIA 569
           G     P N + ++  +N+AR  E  ++   A  +Y+ IL +   Y  A LR   L  ++
Sbjct: 538 GT----PRNAIKLILEYNVARCKESQNEVETAKTMYQKILQECPGYNSAKLRWLLLTCLS 593

Query: 570 KARNNLQLSIELVNEA---LKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGK 626
              +  +   EL+ E+   L+V   Y   +   G   +         E  R         
Sbjct: 594 DKEDIHEELAELLAESPDDLEVRSFYGWYVKKFGKKYMATKGKDIESEHHRETLVNHTSH 653

Query: 627 DSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLA 686
           D YA  SLGN  Y    R  K A K +  ++ +A +LY +V+     + YAA G  ++ A
Sbjct: 654 DCYALTSLGNV-YCTLARESKDAQKKDQYYI-RAAQLYQKVLSIDPKDAYAAQGIAIIFA 711

Query: 687 EKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYY 746
           +K Q  ++ ++F +V+E+      +Q   V+INL H +     +A +++ YQ  L ++  
Sbjct: 712 DKKQVGIALEIFRKVRES------LQDISVYINLGHCFLEAKQYAKSIESYQLALTRYTN 765

Query: 747 NTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFS-------- 798
             DA I  +++R        +   +    A+  A   Y +    G+   KF+        
Sbjct: 766 GQDANIYNFISRAWLYRAMAEKAFEYYKTALQFAEKAYKIN---GLPSIKFNIAFVHFQL 822

Query: 799 ASTLQK---TRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGFDEKKI-----NTHVE 850
           A  L+K   T+RT  ++  ++  L  A++  + L+          +E K+     NT ++
Sbjct: 823 AEFLRKQPPTKRTVADLEESMVGLTQAIKSLNELATDEKHPPFPAEELKLRANMGNTLIK 882

Query: 851 YCKHLLDAAKIHREAAERE----------EQQNRQRQEAARQAALAEEARRKAEEQKKYL 900
             +  +   K +    E +          E+Q +Q Q             ++AEE+K+  
Sbjct: 883 QLEKAIAEQKDYEGEVENKIRTAKKQKILEEQRKQEQREKELEEQRRLEEKRAEERKR-- 940

Query: 901 LEKRKLEDEQKRLRQQEEH 919
           LE+   E  Q+RL + +++
Sbjct: 941 LEEAAKEWNQQRLEEDKDN 959


>gi|262302965|gb|ACY44075.1| SH2 domain binding protein [Scutigera coleoptrata]
          Length = 178

 Score =  170 bits (430), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 82/178 (46%), Positives = 117/178 (65%)

Query: 147 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 206
           A + F  VL    +N+P+LLG+AC+ FN+     +L FYK+AL+ +PSCP A+RLG+G C
Sbjct: 1   ADAQFNFVLNQSSNNIPSLLGKACIAFNKKDSRGALAFYKKALRTNPSCPAAVRLGMGHC 60

Query: 207 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY 266
             KLG+L KAR AF+RALQLDP+ V ALV LA+++L       IR G++ + +A+ I P 
Sbjct: 61  FVKLGKLDKARLAFERALQLDPQCVGALVGLAILELNNKTPESIRNGVQMLSKAYAIDPT 120

Query: 267 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 324
             M LN+LANHFFF   +  V+ L   A   T +   ++ S Y LAR++H +GDY++A
Sbjct: 121 NPMVLNHLANHFFFKKDYQKVQHLALHAFHNTENEAMRAESCYQLARAFHVQGDYDQA 178



 Score = 43.9 bits (102), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 33/134 (24%), Positives = 64/134 (47%), Gaps = 6/134 (4%)

Query: 335 INKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLK-ALGHIYVQLGQIE 393
           +N+    I    G   +     D R AL  ++K L   P     ++  +GH +V+LG+++
Sbjct: 9   LNQSSNNIPSLLGKACIAFNKKDSRGALAFYKKALRTNPSCPAAVRLGMGHCFVKLGKLD 68

Query: 394 KAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIE--VL 451
           KA+    +A ++DP+   A + L  L +++ T    ++ +    +L KA    P    VL
Sbjct: 69  KARLAFERALQLDPQCVGALVGLAILELNNKTP---ESIRNGVQMLSKAYAIDPTNPMVL 125

Query: 452 NNIGVIHFEKGEFE 465
           N++    F K +++
Sbjct: 126 NHLANHFFFKKDYQ 139


>gi|328857310|gb|EGG06427.1| hypothetical protein MELLADRAFT_77838 [Melampsora larici-populina
           98AG31]
          Length = 1102

 Score =  169 bits (429), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 213/900 (23%), Positives = 366/900 (40%), Gaps = 161/900 (17%)

Query: 6   IPVQNSEEEVRVALDQL---PRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQI 62
           +P+ N+ E + + LD++        +I+ I   E+  +  W     EY+++   E    +
Sbjct: 15  VPLNNNTESLELDLDEICGGEGSVDEIVGIFVGEKLSVKYWTRGVMEYWRRDLREDGVSL 74

Query: 63  LEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETK--------QREKEEHFILAT 114
            E+G     +E    +  + +  L  L      + K+ET         Q  KE +   A 
Sbjct: 75  GEQGLQGRSEECLP-LLCQLVTGLICLAKNLPTM-KLETASYDLLPDAQPIKEVYLSRAL 132

Query: 115 QYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFN 174
            Y N+A+ ID   P     +     AK E +Q  +  + +L+    ++PALL +A V F+
Sbjct: 133 LYVNEATAIDPKNPLVLDAR-----AKKEFDQVFNTCEQILKDKPTHLPALLAKARVLFH 187

Query: 175 RGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDP----EN 230
           R  Y  +L+ Y++ L   P      R+GIG C + LG+   A++A+QR++ + P    ++
Sbjct: 188 RKYYRPALKIYQQILSHAPMFLPDPRIGIGCCFWFLGETSMAKKAWQRSIAVHPGKASQS 247

Query: 231 VEALVAL----AVMDLQANEAAGI---RKGMEKMQRAFEIYPYCAMALNYLANHFF---- 279
            + L+ L    A  D+  ++ A +   ++GM  +Q  F+     A++   LA+HF     
Sbjct: 248 AQVLLGLVNFHASRDIHLSDEAKLSAYQEGMSYIQGTFKTNRNIAISAAVLASHFLTANN 307

Query: 280 -----FTGQHFL-VEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK 333
                F G H +   ++ E A+   +  P    +   LAR++H++G   +A   Y A+  
Sbjct: 308 WATVSFEGPHLVWATKMAERAVQYADANPILVEARLVLARAFHAQGKLVEAQKEYQAA-- 365

Query: 334 EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQL---- 389
            I      + P  G+ Q+ +   ++  A+  FE VL   P   E L  L  +   L    
Sbjct: 366 -ITLDRSVLNPVLGVAQIMVAQNEYVPAINTFENVLRRQPRCIEALVNLAALRTHLAFTS 424

Query: 390 -------GQIEKAQELLRK-------------AAKIDP-----------RDAQAFIDLGE 418
                   +  KA++L  +             AA  DP            D   +ID+  
Sbjct: 425 SSSTEAAAEKTKARDLYEQITRLFATRIKKPGAAPQDPGIMPPRIREVASDPDLYIDIAR 484

Query: 419 LLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDG 478
           L   +D G AL  +  +  + K   + +P  + NNIGV+ ++ G    + +  + AL   
Sbjct: 485 LSTDTDIGRALKGYCQSLAVRKDLEKPIPAMLFNNIGVLEWKNGNLRESQEQIESAL--- 541

Query: 479 IWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNK---VTVLFNLARLL 535
                  + T + V+                     G+  E   N+   V +L+NL  + 
Sbjct: 542 -------AATASAVV---------------------GDETERETNERAAVCMLYNLGVVC 573

Query: 536 EQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKV---NGKY 592
           E   +   A  +Y  IL ++ +YVDA  RLA +  +  N   +  L+ EAL     NG+ 
Sbjct: 574 EDTGEKEKAKDIYERILIRHPEYVDAKARLALMHLSHRNFDKANGLLKEALTSQTGNGE- 632

Query: 593 PNALSMLGDLELKNDDWVKAKETFRAAS-DATDGKDSYATLSLGNWNYFAALRNEKRAPK 651
              L  L    L   + +K    F  A+    D +D YA  + G   Y  A  N+   P+
Sbjct: 633 ---LRALYTYFLIESNQIKQARDFSVATLKDHDKQDIYALCASGALLYTQARENKDPGPE 689

Query: 652 LE---ATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAE-----------KGQFDVSK-- 695
                A    +A E + + I       +AA G  + LAE            GQ   +   
Sbjct: 690 ASMERANRFFRAAEFFEKAIQLDHHCAFAAQGLAIALAEHVIGGASMGSQNGQSSGTDGN 749

Query: 696 -----------DLFTQVQEAAS-GSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRK 743
                       +FT+V+EA + GSV+V       NL H Y+ +  F  +++ Y    ++
Sbjct: 750 AIRAKNIRDAITIFTKVKEAVNDGSVYV-------NLGHCYYLRDEFERSIENYNTASKR 802

Query: 744 FYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAI-------HLAPSNYTLRFDAGVAMQK 796
           FY   +  +LLYLAR  ++         SL  A+        L P +    F+  +  QK
Sbjct: 803 FYQGKNIPVLLYLARAWFQKASKDQSFVSLRNALTNAQAAQELNPRDAATAFNVALIQQK 862


>gi|367028110|ref|XP_003663339.1| hypothetical protein MYCTH_2305158 [Myceliophthora thermophila ATCC
           42464]
 gi|347010608|gb|AEO58094.1| hypothetical protein MYCTH_2305158 [Myceliophthora thermophila ATCC
           42464]
          Length = 1320

 Score =  169 bits (429), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 226/906 (24%), Positives = 376/906 (41%), Gaps = 180/906 (19%)

Query: 3   CVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQI 62
            + IP+Q+ + EV + L  LP D +++  + + EQ+P   W+ +A  Y KQ K++   ++
Sbjct: 39  TIDIPMQD-DVEVEIDLQVLPDDPTELCSVFENEQSPRIYWMTVALAYAKQNKIDFAIEM 97

Query: 63  LEEGSSPEIDEYYADVRYERIAILNALGVYYTYL----------GKIETKQREKEEHFIL 112
           L  G++          + E++ I+  +   Y +           G   ++ + KE +  L
Sbjct: 98  LLRGAN-----VLQGNQREKLGIITCICWLYLWKSREAPRVAPDGVPASEAKTKEYYLQL 152

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEV---------------EQASSAFKIVLEA 157
           ATQ  N ASRI+   P  ++ +G L+L K  +               EQ  +A K   EA
Sbjct: 153 ATQSLNDASRINPAFPPLFLARGVLILLKASLQPSSKAPGAVDSNKAEQLRNALKSFEEA 212

Query: 158 DR----DNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSC--PGAIRLGIGLCRYKLG 211
            R     N+ A++G+A   F+ GRY +SL  Y+  +   P    P   R+GIG C ++LG
Sbjct: 213 IRVSQGRNMLAVMGKARALFSLGRYPESLAAYQDVVAKMPDMVDPDP-RIGIGCCFWQLG 271

Query: 212 QLGKARQAFQRALQLDPENVEALVALAVMDLQA------NEAAGIR---KGM-EKMQRAF 261
               A+ A++R L+++P++  A + L +  L A      N    IR   K M E  Q++F
Sbjct: 272 FKDDAKIAWERCLEINPDSKHANILLGLYYLDASGHVPTNSPEFIRLYKKAMTEYTQKSF 331

Query: 262 EIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDY 321
           ++     +     A +F    Q   V+ L   A+  T+     S  +Y LAR  H  G+ 
Sbjct: 332 KLDKNLPLTCATFAGYFLSRKQFGNVDALAHKAIQYTDVNAIASDGWYLLARKEHYDGNL 391

Query: 322 EKAGLYYMASVKEINKPHEFIFP-YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLK 380
           E+A  YY  +            P  +G  Q+ +   D   A    EK+++ +  N E + 
Sbjct: 392 ERASDYYRRADDARGGAERGYLPAKFGAAQLSVLKNDLGEAKLRLEKMIQ-HSKNYEAMI 450

Query: 381 ALGHIYVQ--------------LGQIEKAQELLR--KAAKIDPR-----DAQAFIDLGEL 419
            LG +Y +                + +KA  LL   ++A  DP+     DA   ++L  L
Sbjct: 451 LLGTLYAEEVFANQSAAVKEDKSAEAKKAISLLEGVRSAWKDPKRNLSPDAAVLLNLARL 510

Query: 420 LISSDTGAALDAFKTARTL-----------------------LKKAGEEVPIEVLNNIGV 456
             S     AL   +    L                       ++K    +P ++LNNIG 
Sbjct: 511 YESESPDKALQCLQQVEQLEIDQIPQSEYPPDAEDEAAARAAIRKL---LPPQLLNNIGC 567

Query: 457 IHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGN 516
            + ++G+   A + F+ AL                  D+ A + Q          END  
Sbjct: 568 FYSQEGKHRLATEFFQAAL------------------DSCARISQ---------TEND-- 598

Query: 517 HVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQ 576
            +++     T+ FNL R  E   D   A   Y  +L ++ DY DA  RLA I   RN   
Sbjct: 599 -LDIDALLTTIPFNLGRSYEYEGDIDKAIETYEQLLSRHSDYTDARTRLAYIKLRRN--- 654

Query: 577 LSIELVNEALKVNGKYPNALSML-----GDLELKN-DDWV--KAKETFRAASDATDGK-- 626
                       N + P+A++ L      DLE++    W   K     R A+ A D +  
Sbjct: 655 -----------PNKEGPDAVAKLYQENPSDLEVRGLYGWFLSKVNSKKRPANIAEDPEQR 703

Query: 627 ------------DSYATLSLGNWNYFAA--LRNEKRAPKLE-ATHLEKAKELYTRVIVQH 671
                       D YA + +GN +  AA  +R E    + + +    +A E + + +   
Sbjct: 704 HYKHTLQSYDKHDRYALVGMGNLHLMAAREMRRETEQDRQKRSAAYNRAVEFFDKALQLD 763

Query: 672 TSNLYAANGAGVVLAE-KGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNF 730
             N YAA G  + L E +  +  +  +F +V+E       +Q   V++N+ H+Y     F
Sbjct: 764 PKNAYAAQGIAIALVEDRKDYKNALQIFIKVRET------IQDAHVYVNMGHIYAELRQF 817

Query: 731 ALAMKMYQNCLRKFYYNTDAQILLYLART---HYEAEQWQDCKKSLL----RAIHLAPSN 783
           + A++ Y+  L K     DA I+  L RT      AE+  D  K  L    +A+ +AP  
Sbjct: 818 SKAIESYEIALSKEGKANDAGIISCLGRTWLNKGRAERNLDAYKMALDQAKKAVAVAPDQ 877

Query: 784 YTLRFD 789
              +F+
Sbjct: 878 LHFKFN 883


>gi|451854332|gb|EMD67625.1| hypothetical protein COCSADRAFT_83023 [Cochliobolus sativus ND90Pr]
          Length = 1165

 Score =  169 bits (427), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 248/1032 (24%), Positives = 426/1032 (41%), Gaps = 189/1032 (18%)

Query: 14  EVRVALD-QLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQILEEGSSPEID 72
           +V + LD Q+  D +++ DIL+AE++    W+ +A  Y K  ++E    +L++ +     
Sbjct: 27  DVEIPLDDQIQDDPTELCDILEAEKSATSTWVQVAVAYAKHRRIETAIDVLKQAT----- 81

Query: 73  EYYADVRYE-RIAILNALGVYYTYLGKIETKQREKEEH---------FIL--ATQYYNKA 120
           + ++  R + R++ILN  G+ + YL K     R + ++         F +  AT   N A
Sbjct: 82  QVFSRARPDDRLSILN--GLCWLYLLKCREAPRVRPQNADPDTKLKEFWIQSATGVLNDA 139

Query: 121 SRIDMHEPSTWVGKGQLLLAKGEVE-------------------QASSAFKIVLEADRD- 160
           SRI    P  ++ +G L L K  ++                   QA+  F+  L A    
Sbjct: 140 SRISPSHPPLFLARGVLYLLKASLQGPATAAGSTVSPERMETLKQAAKCFEDALRASGGR 199

Query: 161 NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSC--PGAIRLGIGLCRYKLGQLGKARQ 218
           N+ A +G+A V ++ G+++D+L+ Y+  L+  P    P   R+GIG C ++LG   +A  
Sbjct: 200 NLMAKMGKARVNYSMGKWADALKAYQNILESSPDLIDPDP-RIGIGCCFWQLGYKDEAAN 258

Query: 219 AFQRALQLDPENVEALVALAVMDLQ--ANEAAGIRKGMEKMQRAFEIYPYCAMALNYLAN 276
           A+QR+L+L+P +  AL+ L + + Q  AN +    K  E +++A   +   A+ L+   N
Sbjct: 259 AWQRSLELNPRSKVALILLGIYNFQQTANLSTSDPKFAELIKKATGEFIQPALKLD---N 315

Query: 277 HFFFT----GQHFLV-------EQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAG 325
            +  +    G + ++       E +   A+ +T+     S  +Y  A+  H + +   A 
Sbjct: 316 QYPLSCATVGSYLILRRDVNKTEDVARRAIELTDTNAIASDGWYLRAKVAHQQDNIALAA 375

Query: 326 LYYMASVK-EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGH 384
            YY  S +    +   FI   +GL Q+ + + ++  A    EK+L+  P N E    LG 
Sbjct: 376 EYYSKSDQARGGEERGFIPAKFGLAQMNVLMSNYDGAKFRLEKILQQSP-NVEAQTLLGT 434

Query: 385 IYVQ---LGQIEKAQE----LLRKAAKI---------DPR-----DAQAFIDLGELLISS 423
           +Y +     Q  K+ E     L+KA K          DP+     D    ++L  L  + 
Sbjct: 435 LYAEDVFNAQNSKSTEDKSAELKKALKYLESVQSAWKDPKKKVVPDQSVLLNLARLYETE 494

Query: 424 DTGAAL--------------------DAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGE 463
               +L                    +  +    L     E +P ++LNN+G  HF+   
Sbjct: 495 HPERSLKCLEEVEQMEIEAIPQEDYPEGIEEGPELTTALREMLPPQLLNNMGCFHFQAER 554

Query: 464 FESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWN 523
           +  A + F+ AL        ++++ +   ID  A +                        
Sbjct: 555 YVRAQELFQVAL-----TACVNAENRDDTIDTDALV------------------------ 585

Query: 524 KVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVN 583
             ++ FNLAR  E    T  A  +Y  +L ++ DYVDA +RL  +A   N        V 
Sbjct: 586 -TSISFNLARTYEAEGQTDEAKKVYNSLLQRHPDYVDARIRLTYMALKENPQDEGPRAVK 644

Query: 584 EALKVNGKYPNALSMLGDLELKNDDWVKAKETFR----AASD----------ATDGKDSY 629
           +  K N       ++ G        W   K   R    AA D           +D  D Y
Sbjct: 645 DLFKQNEDNVEVRALYG--------WYVNKSKKRTQNFAADDEQRLYKHTLQKSDKHDRY 696

Query: 630 ATLSLGNWNYFAALRNEKRAPKLEATH----LEKAKELYTRVIVQHTSNLYAANGAGVVL 685
           + + +GN  + A  R   R  + +        E+A E + +V+     N YAA G  + L
Sbjct: 697 SLMGMGNI-HLAIAREMPRTSEQDKEKRRKGYERAVEFFDKVLQLDPKNAYAAQGIAIAL 755

Query: 686 AE-KGQFDVSKDLFTQVQEAASG-SVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRK 743
            E K  +  +  +FT+V+E     SVFV       NL H Y     ++ A++ Y+  L K
Sbjct: 756 VEDKKDYSTALQIFTKVKETLKDHSVFV-------NLGHTYCEIRQYSRAIENYEAALSK 808

Query: 744 FYYNTDAQILLYLARTHYEAEQWQ----------DCKKSLLRAIHLAPSNYTLRFDAGVA 793
             +N D +IL  L R  Y   + +          D  K  L+A   AP++   +F+  VA
Sbjct: 809 NRHN-DPKILACLGRAWYLRAKHERSIAGFRTALDYSKQALKA---APADLNSQFN--VA 862

Query: 794 MQKFSAST----LQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGFD-EKKINTH 848
             +F  +T    L + +RT +EV      L  A+     L+          D   + N  
Sbjct: 863 FVQFQIATMIYSLPEHQRTLEEVDDATTGLTEAIEALEKLAKEETPPFPRADITSRANMG 922

Query: 849 VEYCKHLLDAAKIHREAAEREEQQNRQRQEAARQAALAEEARRKAEEQKKYLLEKRKLED 908
                  L+ A+  + A E E      +    R+A        K   +++ L +KRK  +
Sbjct: 923 RNTMIKQLERAREKQAAYEGENATKLDQARRLREAEKLRREEEKKRLEEEALEKKRKYAE 982

Query: 909 EQKRLRQQEEHF 920
           EQ+RL Q++   
Sbjct: 983 EQERLIQRDREL 994


>gi|425766561|gb|EKV05167.1| RNA polymerase II transcription elongation factor (Ctr9), putative
           [Penicillium digitatum PHI26]
 gi|425781714|gb|EKV19661.1| RNA polymerase II transcription elongation factor (Ctr9), putative
           [Penicillium digitatum Pd1]
          Length = 1191

 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 228/944 (24%), Positives = 381/944 (40%), Gaps = 164/944 (17%)

Query: 3   CVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQI 62
            + IP  + + EV V+L +LP D +++  +L+ E+A  + W+IIA  Y K+ +++    I
Sbjct: 34  AIDIPASSFDSEVEVSLLELPDDPTELCTLLENEKAAKNFWVIIALAYAKRKQIDHAIDI 93

Query: 63  LEEGSSPEIDEYYADVRYERIAILNALGVYYTYL-----------GKIETKQREKEEHFI 111
           L +G    +         E++ +L  +  +   L           G++ ++ + K+ +  
Sbjct: 94  LTKG----LASVAHGATKEKLGLLGWI-CWMLLLKSRHAPRVAPEGELYSEAKTKDHYLQ 148

Query: 112 LATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-----------------VEQASSAFKIV 154
           LAT   N+ASR++   P  ++ +G L L +                   VE    A K  
Sbjct: 149 LATSTLNEASRLNPAYPPLFLARGVLCLLRASLYPPRAVRPGAIDTSERVESLRQALKCF 208

Query: 155 LEADR----DNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGA-IRLGIGLCRYK 209
            E+ +     N+ A+LG+A   +  GRY+D+LE Y++AL   P+      R+G+G C ++
Sbjct: 209 DESSKAFGGRNIMAILGRARAHYMLGRYADALEGYQKALIKMPNLTDPDPRIGLGCCLWQ 268

Query: 210 LGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGM----------EKMQR 259
           LG   +A+ A++R+L L+PE+  A V LAV  L  +        M          +  Q+
Sbjct: 269 LGFKDQAKIAWERSLYLNPESKVANVLLAVYYLHDSSRRATTDPMFGSMYKLAMTQYTQK 328

Query: 260 AFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 319
           AF++     M  +  A++F     +  VE L   A+  T+     S  +Y L R  H +G
Sbjct: 329 AFKLDKEYPMTCSMFASYFLLRKSYPTVETLARRAIEHTDVMSIASDGWYLLGRKSHYEG 388

Query: 320 DYEKAGLYYMASVKEINKPHEFIFP-YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCET 378
           D   A  +Y  S +      +   P  +G  Q+Q+   DF  A    EK++++   N E 
Sbjct: 389 DDALATEFYNRSDQARGGVDKGYLPAKFGAVQMQITNKDFDGAKFRLEKIIQL-SKNPEA 447

Query: 379 LKALGHIYVQ---LGQIEKAQELLRKAAK-------------------IDPRDA------ 410
           +  L  I+ +     Q   ++E     AK                   I P ++      
Sbjct: 448 MTLLAAIHAEEVFAAQKSGSKEDKSTEAKRAITLLESVRCMWKDEKLNISPDESVLVYLS 507

Query: 411 ------------QAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIH 458
                       Q    L ++ I    G A    +    L     E +P ++LNN+G   
Sbjct: 508 RLYEGTAPDKSMQCLTQLEQIQIGEIPGDARPDIEDQDELNAALRESLPPQLLNNMGCFL 567

Query: 459 FEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHV 518
           ++  +   A   F+ AL        + SK K    D  A +                   
Sbjct: 568 YQNEKIALARGLFQSALN-----ACVQSKEKEDGTDTDALV------------------- 603

Query: 519 ELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLS 578
                  T+ +NL R  E       A  +Y  +L ++ DY +A  RL  IA       L 
Sbjct: 604 ------TTISYNLGRTYEAADMWDEAKKVYEGLLERHADYTEANARLTYIA-------LR 650

Query: 579 IELVNEALKVNGKYPNALSMLGDLELKN-DDWVKAKETFRAASDATDGK----------- 626
               +E  K  GK   A S   +LE+++   W  +K   R A+ A D +           
Sbjct: 651 QSPTDEGPKKIGKLYEADST--NLEVRSLYGWYLSKAKKRVANLAEDSEQRHFKHTLQYY 708

Query: 627 ---DSYATLSLGNWNYFAALRNEKRAPKLEATHLEK----AKELYTRVIVQHTSNLYAAN 679
              D YA   +GN +  AA R+ +R    E     K    A E + + +     N YAA 
Sbjct: 709 DKHDRYALTGMGNVHLLAA-RDMRRDTDQEKEKRRKIYQRAVEFFDKALQLDPKNAYAAQ 767

Query: 680 GAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQN 739
           G  + L      D  KD  + VQ  +     ++ P V++NL HV+     F+ +++ Y+ 
Sbjct: 768 GIAIAL-----IDDKKDHSSAVQILSKIRDTIKDPSVYLNLGHVFAELRQFSRSIEHYEA 822

Query: 740 CLRKFYYNTDAQILLYLARTHY---EAEQWQDCKKSLL----RAIHLAPSNYTLRFDAGV 792
            L K     D QIL  L R  +   + E      K+ L    RA  ++P    L+F+   
Sbjct: 823 ALSKD-RQRDVQILACLGRVWWLRGKQEANLAAMKTALDYATRARDVSPDQLHLQFNVAF 881

Query: 793 AMQKFS--ASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASN 834
              + +  A  LQ T++T  +V+     L+ A+  F  LS   N
Sbjct: 882 VQNQIASLAYGLQPTQKTLQDVQEAAEGLKEAIETFERLSKEKN 925


>gi|408395892|gb|EKJ75064.1| hypothetical protein FPSE_04776 [Fusarium pseudograminearum CS3096]
          Length = 1219

 Score =  168 bits (425), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 229/945 (24%), Positives = 394/945 (41%), Gaps = 170/945 (17%)

Query: 4   VYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQIL 63
           + IP   ++E V + L+ L  + +D+  +L+ E A    W+ +A  Y KQ KV+   ++L
Sbjct: 34  IPIPSGEADEAVEINLEDLVDEPADLCTLLENENAAKTYWMTVALAYAKQHKVDHAIEML 93

Query: 64  EEGSSPEIDEYYADVRYERIAILNALGVYYTYL----------GKIETKQREKEEHFILA 113
           + G + EI +  A+ R +R++++  L   Y +           G   ++ + KE +  LA
Sbjct: 94  QRGGN-EIQKNSANPR-DRVSMVCCLCWMYLWKSREAPRVAPEGTSVSEAKTKEYYLQLA 151

Query: 114 TQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQAS---------------SAFKIVLEAD 158
           T   N A+R++   P  ++ +G LLL +  ++  S               +A K   +A 
Sbjct: 152 TSSLNDAARLNPSFPPIFLARGVLLLLRASLQAPSKTAGGIGSEKHELLKTAVKSFDDAL 211

Query: 159 R----DNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS-CPGAIRLGIGLCRYKLGQL 213
           R     N+ AL+G+A   F+  +Y +SL  Y+  LQ  P       R+GIG C ++LG  
Sbjct: 212 RVSQGKNMLALMGKARALFSMHKYPESLTIYQDVLQKMPDLVDPDPRIGIGCCFWQLGFK 271

Query: 214 GKARQAFQRALQLDPENVEALVALAVMDLQANEAAGI---------RKGM-EKMQRAFEI 263
             A+ A++R L+++P +  A + L +  L A+    +         +K M E  Q++F++
Sbjct: 272 DDAKMAWERCLEINPNSKVANILLGLYYLDASGHVPVNSDDFLKLYKKAMTEYAQKSFKL 331

Query: 264 YPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEK 323
                +  +  + +F        V++L   A+  T+     S  +Y LAR  H  GD E+
Sbjct: 332 DKDVPLTCSTFSGYFLSRKAWDNVDKLAHKAIQYTDVNAIASDGWYLLARKEHYTGDIER 391

Query: 324 AGLYYMASVKEINKPHEFIFP-YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKAL 382
           A  YY  + +          P  +G+ Q+ +   D   A    EK+++    N E +  L
Sbjct: 392 AADYYRRADEARGGTETGYLPAKFGVAQLSVMKNDLGEAKLRLEKMIQ-QSKNHEAMILL 450

Query: 383 GHIYVQ---LGQIEKAQE----LLRKAAKI---------DPR-----DAQAFIDLGELLI 421
           G +Y +     Q+  ++E     L+KA  +         DP+     DA   ++L  L  
Sbjct: 451 GTLYAEEVFANQVSDSKEDKSAELKKAITLLESVRNAWKDPKRALSPDASVLLNLARLYE 510

Query: 422 SSDTGAALDAFKTARTL-------------LKKAGE-------EVPIEVLNNIGVIHFEK 461
           +     AL   +    L             +  A E        +P ++LNNIG  H + 
Sbjct: 511 TDQPDKALQCLQQVEQLELDQVPDSEQPEDITDAAEIKAALRKSLPPQLLNNIGCFHSQA 570

Query: 462 GEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELP 521
            + E A   F+ ALG  I +   D    T   DA  S                       
Sbjct: 571 EKHELASDMFEAALGACIKIGEKDPDMDT---DALVS----------------------- 604

Query: 522 WNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIEL 581
               T+ FNLAR  E    T  A+ +Y  +L ++ DY DA  RLA I K R N       
Sbjct: 605 ----TISFNLARSYESRGLTDKATEVYEGLLARHDDYTDARARLAYI-KLRKN------- 652

Query: 582 VNEALKVNGKYPNALSML-----GDLELKN-DDWV--KAKETFRAAS---DAT------- 623
                  N + P+A++ L      DLE++    W   K     R A+   DA        
Sbjct: 653 ------PNKEGPDAVAKLYQENNTDLEVRALYGWYLGKVHSRKRPANLNEDAEFRHYKHT 706

Query: 624 ----DGKDSYATLSLGNWNYFAA--LRNEKRAPKLEATHL-EKAKELYTRVIVQHTSNLY 676
               D  D +A + +GN     A  +R E  + K + + +  KA E + + +     N Y
Sbjct: 707 LQNYDKHDRHALVGMGNLYLMQAREMRRESDSDKQKRSAIYAKAVEFFEKALSLDPKNAY 766

Query: 677 AANGAGVVLAE-KGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMK 735
           AA G  + L E K     +  +F +V+E    S       +++NL HV+     ++ A++
Sbjct: 767 AAQGIAIALVEDKKDHKSALGIFNKVRETLRDS------HLYVNLGHVFAELRQYSKAIE 820

Query: 736 MYQNCLRKFYYNTDAQILLYLART-------HYEAEQWQDCKKSLLRAIHLAPSNYTLRF 788
            Y+  L K     D  IL  L RT         + + +    +   +A+ +AP     +F
Sbjct: 821 HYEIALSKDGKKDDPTILACLGRTWLNRGRAERDVDSYNKALECAQKALEVAPEQVHYKF 880

Query: 789 D-AGVAMQKFS-ASTLQKTRRTADEVRSTVAELENAVRVFSHLSA 831
           + A V +Q  +    L + +R+ +++      LE+A+     ++A
Sbjct: 881 NVAFVQIQLVTLVQGLPENKRSTEQLEKAAEGLESAITSLDEIAA 925


>gi|262302957|gb|ACY44071.1| SH2 domain binding protein [Phrynus marginemaculatus]
          Length = 178

 Score =  168 bits (425), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 82/178 (46%), Positives = 118/178 (66%)

Query: 147 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 206
           A + F  VL    +N+P+LLG+AC+ FN+  Y  +L FYK+AL+ +P+CP A+RLG+G C
Sbjct: 1   ADAQFNFVLNQSPNNIPSLLGKACIAFNKKDYRGALAFYKKALRTNPNCPAAVRLGMGHC 60

Query: 207 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY 266
            YKLG+  K+R AF+RALQLDP+ V ALV LAV++L       IRKG++ + +A+ I   
Sbjct: 61  FYKLGKHDKSRLAFERALQLDPQCVGALVGLAVLELNQKTPDLIRKGVQMLSKAYTIDST 120

Query: 267 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 324
             M LN+LANHFFF   +  V+ L   A   T +   ++ S Y LAR++H +GDY++A
Sbjct: 121 NPMVLNHLANHFFFKKDYSKVQHLALHAFHNTENEAMRAESCYQLARAFHIQGDYDQA 178


>gi|241957027|ref|XP_002421233.1| Paf1 complex subunit, putative; RNA polymerase-associated protein
           Ctr9 homologue, putative [Candida dubliniensis CD36]
 gi|223644577|emb|CAX40565.1| Paf1 complex subunit, putative [Candida dubliniensis CD36]
          Length = 1086

 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 237/981 (24%), Positives = 420/981 (42%), Gaps = 133/981 (13%)

Query: 20  DQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQILEEGSSPEIDEYYADVR 79
           ++L  D S+++  L  +Q     W+I A  Y K GK+++  + +   ++ ++D +  + +
Sbjct: 38  NELSDDPSELIQFLTDQQTEKQYWIIAASGYAKLGKLKESLEFI--NAALKLDYFTENDK 95

Query: 80  YERIAILNALGVYYTYLG--KIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQL 137
               + +  L V + YLG  K       K+E   L  +    +        S  + +  L
Sbjct: 96  KSFESFVIWLLVKHVYLGIDKDNNLNLAKKEISKLNFKIQTDSETSTSVSTSNLLSQAIL 155

Query: 138 LLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGR-YSDSLEFYKRALQVHPSCP 196
            L + + + A   F  +L  D +N  ALLG+A    N+ + YS +L+ Y++ L ++P   
Sbjct: 156 YLYESKDDDAIDIFDRILRLDPNNCFALLGKAQSVLNKTKNYSHALKLYQQVLILNPLMK 215

Query: 197 GAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGI------ 250
              RLGIGLC + L     A +A++R+LQLDP NV++ + L +          +      
Sbjct: 216 PDPRLGIGLCFWFLRDDKMAIKAWERSLQLDPTNVKSRIFLNLAKFHTTFTNSLSDEEFL 275

Query: 251 ---RKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALA-VTNHGPTKSH 306
              +  ++++ +   +       +  L ++ F  G +  V ++ E  +  +T     K  
Sbjct: 276 DNYKNCLQELSKLKSLNADDTTVILALCSYLFSKGDYNTVIKIVEKIVKKITGSDNLKKF 335

Query: 307 SYYN----------------LARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQ 350
           S ++                LAR   ++GD+ ++  Y+  ++K +N+ +  I    GLGQ
Sbjct: 336 STFSRITKYESNVLSQCSTWLARIEFARGDFIQSSKYFQEAIK-LNESN--IVAKLGLGQ 392

Query: 351 VQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQ---LGQIEKAQELLRKAAKI-- 405
            Q   G    A   FE +L       E   +LG +Y +     + E A ++L +  ++  
Sbjct: 393 SQYNRGSTEEASLTFESILRSNVKCLEVNYSLGVLYSKQNSRSKKEMAIQVLERYIRLSN 452

Query: 406 ---------------DPRDAQAFIDLGELLI-SSDTGAALDAFKTARTLLKKAGEEVPIE 449
                          +P    A++ L +L     D+  AL     A    K+  ++VP+E
Sbjct: 453 NRGISSNEEEFVLNKEPVALNAYLILSQLYEEKGDSIQALTYLNKAVEARKQVEKDVPLE 512

Query: 450 VLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFH 509
           V NNIGV  F K  ++SA  +F  ALG                +D S     FK      
Sbjct: 513 VYNNIGVFQFTKQNYDSALDNFTAALGK---------------LDGS----DFKSP---- 549

Query: 510 RFENDGNH-VELPWN-KVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRL-- 565
               DG+  V+LP + + ++ +NLAR  E I +   A   Y  +L +  +Y  A LR+  
Sbjct: 550 ----DGDTLVDLPQDLRTSLTYNLARTKE-ISNQKDALETYEQLLTECPNYFSAKLRILF 604

Query: 566 -----AAIAK--ARNNLQLSIELVNEALKVNGKYPNALSMLGD-LELKND-DWVKAKETF 616
                  I+K   RN ++  +EL    L+V   Y   +   G  L + +D D    K+T 
Sbjct: 605 LNCLTEGISKEEIRNEIEQLLELNASDLEVRSFYGWFIKNFGKRLHMPSDADTKLQKDTL 664

Query: 617 RAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLY 676
                  D  D YA +SL N  Y    R+ K A +    +  +A EL+T+V+   + N+Y
Sbjct: 665 VEF----DSHDCYALISLANI-YCIMARDAKGADEKRKKYYLRAIELFTKVLSLDSKNVY 719

Query: 677 AANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKM 736
           AA G  +   E  Q +   D+  +++++ +         V++NL HV      F  A++ 
Sbjct: 720 AAQGLAITYIENKQLNKGLDILRKIRDSLND------ISVYLNLGHVLCDLKQFGKAIEN 773

Query: 737 YQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQK 796
           Y+  L ++    DA+IL +L R  Y     +     L +A+  A + +        A   
Sbjct: 774 YELALARYTDGKDAKILSFLGRVWYLRGNAESSLAYLKKALEYAQAAFDAARTTSKAALS 833

Query: 797 FSASTLQ-----------KTRRTADEVRSTVAELENAVRVFSHLSAASNLH-------LH 838
           F+ S +Q              R  D++ S +  L NA+ + + L++    H       L 
Sbjct: 834 FNISFVQFQIADFITKQPVNERNVDDIESAIEGLNNAIDILTQLASDEEKHPPYPREELR 893

Query: 839 GFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEAARQAALAEE-ARRKAEEQK 897
           G      +T +    + L  A+     AE EE     + E A+Q  + EE  R K EE++
Sbjct: 894 GRANLGTSTLLSRLGNAL--AETKENNAEIEE-----KIEKAKQIRMEEEQTRLKEEEER 946

Query: 898 KYLLEKRKLEDEQKRLRQQEE 918
              L++++LE  ++R+  QE+
Sbjct: 947 LNKLKEKELEMSKQRMALQEQ 967


>gi|342877385|gb|EGU78851.1| hypothetical protein FOXB_10640 [Fusarium oxysporum Fo5176]
          Length = 1212

 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 228/940 (24%), Positives = 396/940 (42%), Gaps = 154/940 (16%)

Query: 2   ACVYIPVQNSEEE--VRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQF 59
           + + IPVQ  +E+  V + L+ L  D +++  + + E+A    W+ +A  Y KQ K++  
Sbjct: 30  SAIDIPVQGDQEDEAVEIDLEDLVDDPTELCTLFENERAAKTYWMTVALAYAKQHKIDHA 89

Query: 60  RQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYL----------GKIETKQREKEEH 109
            ++L+ G S  I    ++ R ++++++  L   Y +           G   ++ + KE +
Sbjct: 90  IEMLQRGGSA-IQSNSSNPR-DKVSMICCLCWMYLWKSREAPRVAPEGTSVSEAKTKEYY 147

Query: 110 FILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQAS---------------SAFKIV 154
             LAT   N A+R++   P  ++ +G LLL +  ++  S               +A K  
Sbjct: 148 LQLATSSLNDAARLNPSFPPIFLARGVLLLLRASLQAPSKTTGGIGSEKHELLKTAVKSF 207

Query: 155 LEADR----DNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSC--PGAIRLGIGLCRY 208
            +A R     N+ AL+G+A   F+  +Y +SL  Y+  LQ  P    P   R+GIG C +
Sbjct: 208 DDALRVSQGKNMLALMGKARALFSMHKYPESLTIYQDVLQKMPDLVDPDP-RIGIGCCFW 266

Query: 209 KLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGI---------RKGM-EKMQ 258
           +LG    A+ A++R ++++P++  A + L +  L A+    +         +K M E  Q
Sbjct: 267 QLGFKDDAKMAWERCIEINPDSKVANILLGLYYLDASGHVPVNSDEFLKLYKKAMTEYTQ 326

Query: 259 RAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSK 318
           ++F++     +  +  A +F         ++L   A+  T+     S  +Y LAR  H  
Sbjct: 327 KSFKLDKNLPLTCSTFAGYFLSRKSWDNADKLAHKAIQYTDVNAIASDGWYMLARKEHYD 386

Query: 319 GDYEKAGLYYMASVKEINKPHEFIFP-YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCE 377
           GD E+A  YY  + +          P  +G+ Q+ +   D   A    EK+++   +N E
Sbjct: 387 GDTERATDYYRRADEARGGTETGYLPAKFGVAQLSVLKNDLGEAKLRLEKMIQQSKNN-E 445

Query: 378 TLKALGHIYVQ--------------LGQIEKAQELL---RKAAKIDPR-----DAQAFID 415
            +  LG +Y +                +++KA  LL   R A K DP+     DA   ++
Sbjct: 446 AMILLGTLYAEEVFANQVSDSKEDKSAELKKATALLEGVRNAWK-DPKKALSPDASVLLN 504

Query: 416 LGELLISSDTGAALDAFKTARTL-------------------LKKA-GEEVPIEVLNNIG 455
           L  L  +     AL   +    L                   +K A  + +P ++LNNIG
Sbjct: 505 LARLYETDHPDKALQCLQQVEQLELDQVPASERPEDSTDEAEIKAALRKSLPPQLLNNIG 564

Query: 456 VIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDG 515
             H +  + E A   F+ ALG  + +   D +  T   DA  S                 
Sbjct: 565 CFHSQAEKHELASDLFEAALGACMKIGEKDPEMDT---DALVS----------------- 604

Query: 516 NHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNL 575
                     T+ FNLAR  E    T  A  +Y  +L ++ DY DA  RLA I   +N  
Sbjct: 605 ----------TISFNLARSYESRGLTDKAVEVYESLLARHDDYTDARARLAYIKLRKNPN 654

Query: 576 QLSIELV-------NEALKVNGKYPNALSMLGDLE----LKNDDWVKAKETFRAASDATD 624
           +   + V       N  L+V   Y   L  +G  +    L  D+  +    F+      D
Sbjct: 655 KEGPDAVAKLYQENNTDLEVRALYGWYLGRVGSRKRPANLGEDNEFR---HFKHTLQNYD 711

Query: 625 GKDSYATLSLGNWNYFAA--LRNEKRAPKLE-ATHLEKAKELYTRVIVQHTSNLYAANGA 681
             D +A + +GN     A  +R E  + K + +    KA E + + +     N YAA G 
Sbjct: 712 KHDRHALVGMGNLYLMQAREMRRESDSEKQKRSATYGKAVEFFDKALSLDPKNAYAAQGV 771

Query: 682 GVVLAE-KGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNC 740
            + L E K  +  +  +F +V+E    S       +++NL H+Y     ++ A++ Y+  
Sbjct: 772 AIALVEDKKDYKAALGIFNKVRETIRDS------HLYVNLGHIYAELRQYSKAIEHYEIA 825

Query: 741 LRKFYYNTDAQILLYLART---HYEAEQWQDCKKSLL----RAIHLAPSNYTLRFD-AGV 792
           L K     DA IL  L RT      AE+  D     L    +A+ +AP     +F+ A V
Sbjct: 826 LSKDGKANDATILACLGRTWLNRGRAERDVDAHIKALECAQKALEVAPEQMHYKFNVAFV 885

Query: 793 AMQKFS-ASTLQKTRRTADEVRSTVAELENAVRVFSHLSA 831
            +Q  +    L + +R+ +++      LE A+     ++A
Sbjct: 886 QIQLVTMVQGLPENKRSTEQLEKAAEGLEAAIASLDEIAA 925


>gi|262302931|gb|ACY44058.1| SH2 domain binding protein [Lepas anserifera]
          Length = 178

 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 81/178 (45%), Positives = 115/178 (64%)

Query: 147 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 206
           A + F  VL    +++P+LLG+AC+ FN+  Y  +L FYK+AL+ +P CP  +RLG+G C
Sbjct: 1   ADAQFNFVLNQSPNSIPSLLGKACIAFNKKDYKGALAFYKKALRTNPQCPADVRLGMGHC 60

Query: 207 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY 266
             KLG + KAR AF+RAL+LD   V ALV LA+++L   +   IR G++ + RA+ I P 
Sbjct: 61  FLKLGNVEKARLAFERALELDGNCVGALVGLAILELNNKQPESIRSGVQMLSRAYTIDPT 120

Query: 267 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 324
             M LN+LANHFFF   +  V+QL   AL  T +   ++ S Y LAR++H + DYEKA
Sbjct: 121 NPMVLNHLANHFFFKKDYVKVQQLATYALYNTENDAMRAESCYQLARAFHVQADYEKA 178


>gi|389741651|gb|EIM82839.1| RNA polymerase II-associated protein [Stereum hirsutum FP-91666 SS1]
          Length = 1120

 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 232/1045 (22%), Positives = 446/1045 (42%), Gaps = 168/1045 (16%)

Query: 12   EEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQI--------L 63
            +E + + LD L  +A D++++LK  +  + +W  +A EY ++G ++   +I         
Sbjct: 21   QEVINIELDTLDANADDVVEVLKEGRPKVSVWTRLAGEYLRRGHLDAAEKIAKDAVACFT 80

Query: 64   EEGSS--PEIDEYYADV---------RYERIAILNALGVYYTYLGKIETKQREKEEHFIL 112
            E G++  P +   Y+ +         R  ++ + NA          I T+++ ++EH   
Sbjct: 81   EPGTTHPPSLPPLYSLLANIELAKARRAPKMKLANARQ-------DIMTQEKSRDEHMRE 133

Query: 113  ATQYYNKASRIDMHE---PST--WVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLG 167
            AT+Y N+  +    E   PS    + +    L+   ++ A   F+ +L A   N+ AL+G
Sbjct: 134  ATRYLNECEKTCNQEGIPPSQLFMLTRATYQLSNRSLDDALREFEAILSAYPRNLIALMG 193

Query: 168  QACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLD 227
            +A + + R +++ SL+ +++ LQ++PSC    R+GIGLC + L    +A+ A+QR+++++
Sbjct: 194  KARILYARRQFAMSLKAFQQVLQLNPSCLPDPRIGIGLCLWALNHKEQAKAAWQRSIEVN 253

Query: 228  PENVEALVALAVMDL---------QANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHF 278
            P    A V L +  L         +A  A  I  G + ++ AF+     A A N L + F
Sbjct: 254  PSEWSAHVLLGLEALNTSKSPLLSEAERAHEIMTGTKLIESAFKANQRNAAAANALCDIF 313

Query: 279  FFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKP 338
               GQ+    +L E  +   +     +  Y    R  HS+G Y+ A  ++  +   + K 
Sbjct: 314  LRKGQYKRALKLAERTIQFADTVTLLNEGYIRAGRVCHSEGSYDDATKHFKVAASGMPK- 372

Query: 339  HEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKAL-------GHIYVQLGQ 391
               +    GL Q+Q++  +   A+   + +L+  P+   +L+A         H    +  
Sbjct: 373  --NVLAAIGLAQMQMRNDEIPGAIHTLDTLLQP-PNPQRSLEATVMLASLRAHPRPGVSS 429

Query: 392  IEKAQELLR------------------------------------KAAKIDPRDAQAFID 415
             + A E +R                                    + +++   D Q  I+
Sbjct: 430  SDAASEKIRARELFDRVAKAIEQGNDQHALATSNGRQNGHSAQSHQPSRLVANDIQMHIE 489

Query: 416  LGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
            + +L  +        AF  A  + + +  E P  +LNN+GV+   +G+ + A   ++ AL
Sbjct: 490  VAKLWQNESLDRTGKAFSEALKISEASRGEDP-RLLNNLGVLAHLEGKTDVARGWYERAL 548

Query: 476  GDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLL 535
                        T    +  SA+ ++  D +                   ++L+NLAR+ 
Sbjct: 549  ------------TGVSALSGSAAGVKGADGEAM---------------STSILYNLARMY 581

Query: 536  EQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNA 595
            E + +   A   Y  +L ++ +YVDA +R A +    N    + +L+ + L       N 
Sbjct: 582  EDVGEHTMAGEAYDKLLERHPEYVDAKIRQAHMLSHLNKQNEAHDLLKQCLTSQPSNLNL 641

Query: 596  LSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPK-LEA 654
             S      + ++    A++   A     D  D YA  +    +Y  A  N   + K +E 
Sbjct: 642  RSYYTYFLILSNSTKLARDFVFATLKDHDKHDVYALCACAWVHYHIARENRDTSTKGVEE 701

Query: 655  TH--LEKAKELYTRVIVQHTSNLYAANGAGVVLAEK--GQFDVS-------KDLFTQVQE 703
                  ++ E Y + +    +   AA G  +V AE   G    S        D   + Q 
Sbjct: 702  RRKFFSRSSEFYVKALEMDPTCAVAAQGLAIVTAEDALGSLGGSLPPGPQPDDALRRGQN 761

Query: 704  AASG-SVFVQ----MPD--VWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYL 756
            A     VF +    M D  V++N+ H Y+A+  +  A++ Y+   R++Y   +   L  L
Sbjct: 762  AREALEVFAKVRESMDDGSVYVNMGHCYYARDEYDRAIECYETASRRYYSGQNVPALQCL 821

Query: 757  ARTHY----EAEQWQDCKKSLL---RAIHLAPSNYTLRFDAGVAMQKFSAS--TLQKTRR 807
             R+ Y    + + +     +L    +A+H+ PS+ ++ ++  +  QK +    ++Q  +R
Sbjct: 822  CRSWYGKANKDQSFVAMNTALTYAQKALHIQPSDKSILYNIAMIQQKAAEMLFSIQPAKR 881

Query: 808  TADEVRSTVAELENAVRVFSHLSAASN------------------LHLHGFDE--KKINT 847
            T  +++  + +  +A ++F+ L+A  +                    L   DE  K+   
Sbjct: 882  TLKDLQRAIQQAGHAQKLFATLAADPSSVVPYNKDIADQRRKYGESMLRKQDEHLKQQRE 941

Query: 848  HVEYCKHLLDAAKIHR-EAAEREEQQNRQRQEAARQAA--LAEEARRKAEEQKKYLLEKR 904
            + E  +  LD A+  R E  ER E   R+R +A R+ A  LAE+ RRKA E+ K   +  
Sbjct: 942  YEEGVRMKLDTARQRRQEEKERHEAVARERVDALRKEAEDLAEQ-RRKAREEAKEWSKNV 1000

Query: 905  KLEDEQKRLRQQEEHFQR-VKARIF 928
            ++E + +R R+ ++   R VK+ + 
Sbjct: 1001 QMESDDERERKAKKAANRKVKSEVV 1025


>gi|262302945|gb|ACY44065.1| SH2 domain binding protein [Hexagenia limbata]
          Length = 178

 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 81/178 (45%), Positives = 116/178 (65%)

Query: 147 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 206
           A + F  VL   ++N+P+LLG+AC+ FN+  Y  +L FYK+AL+ +P+CP  +RLG+G C
Sbjct: 1   ADAQFNFVLNQSQNNIPSLLGKACIAFNKKDYRGALAFYKKALRTNPNCPAGVRLGMGHC 60

Query: 207 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY 266
             KLG   KAR AF+RALQLD + V ALV LAV+ L    A GIR G++ + +A+ I P 
Sbjct: 61  FMKLGNQEKARLAFERALQLDAQCVGALVGLAVLQLNEQTADGIRSGVQMLSKAYTIDPT 120

Query: 267 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 324
             M LN+LANHFFF   +  V+ L   A   T +   ++ S + LARS+H +GDY+++
Sbjct: 121 NPMVLNHLANHFFFKKDYNKVQHLALHAFHNTENEAMRAESCFQLARSFHVQGDYDQS 178



 Score = 42.7 bits (99), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 33/134 (24%), Positives = 61/134 (45%), Gaps = 6/134 (4%)

Query: 335 INKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLK-ALGHIYVQLGQIE 393
           +N+    I    G   +     D+R AL  ++K L   P+    ++  +GH +++LG  E
Sbjct: 9   LNQSQNNIPSLLGKACIAFNKKDYRGALAFYKKALRTNPNCPAGVRLGMGHCFMKLGNQE 68

Query: 394 KAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIE--VL 451
           KA+    +A ++D +   A + L  L ++  T    D  ++   +L KA    P    VL
Sbjct: 69  KARLAFERALQLDAQCVGALVGLAVLQLNEQTA---DGIRSGVQMLSKAYTIDPTNPMVL 125

Query: 452 NNIGVIHFEKGEFE 465
           N++    F K ++ 
Sbjct: 126 NHLANHFFFKKDYN 139


>gi|262302881|gb|ACY44033.1| SH2 domain binding protein [Acanthocyclops vernalis]
          Length = 175

 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 78/174 (44%), Positives = 116/174 (66%)

Query: 151 FKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 210
           F  VL  + +N+PALLG+AC+ +N+  Y  +L FYK+AL+ +P+CP ++RLG+GLC YKL
Sbjct: 2   FDFVLNQEPNNIPALLGKACIAYNKKDYKGALAFYKKALRTNPNCPASVRLGLGLCYYKL 61

Query: 211 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 270
           G   KAR AF+RA +LD   V ALV LA++DL   ++A I++G+ K+ +A+ I P   M 
Sbjct: 62  GNEAKARMAFERAYELDSNCVGALVGLAILDLNQQKSAAIQEGVRKLSKAYTIDPSNPMV 121

Query: 271 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 324
           LN+LANHFFF   +  V+ L   A   T +   ++ S Y LAR++H + D+ +A
Sbjct: 122 LNHLANHFFFKKDYTKVQHLXLHAFHNTENEAMRAESCYQLARAFHVQNDFTQA 175


>gi|262302897|gb|ACY44041.1| SH2 domain binding protein [Chthamalus fragilis]
          Length = 178

 Score =  166 bits (421), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 81/178 (45%), Positives = 114/178 (64%)

Query: 147 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 206
           A + F  VL    +++P+LLG+AC+ FN+  Y  +L FYK+AL+ +P CP  +RLG+G C
Sbjct: 1   ADAQFNFVLNQSPNSIPSLLGKACIAFNKKDYKGALAFYKKALRTNPECPADVRLGMGHC 60

Query: 207 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY 266
             KLG   KAR AF+RAL+LD   V ALV LA+++L   +   IR G++ + RA+ I P 
Sbjct: 61  FLKLGNADKARLAFERALELDGNCVGALVGLAILELNNKQPESIRSGVQMLSRAYTIDPT 120

Query: 267 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 324
             M LN+LANHFFF   +  V+QL   AL  T +   ++ S Y LAR++H + DYEKA
Sbjct: 121 NPMVLNHLANHFFFKKDYVKVQQLATYALYNTENDAMRAESCYQLARAFHVQADYEKA 178


>gi|242794820|ref|XP_002482454.1| RNA polymerase II transcription elongation factor (Ctr9), putative
            [Talaromyces stipitatus ATCC 10500]
 gi|218719042|gb|EED18462.1| RNA polymerase II transcription elongation factor (Ctr9), putative
            [Talaromyces stipitatus ATCC 10500]
          Length = 1198

 Score =  166 bits (421), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 231/1043 (22%), Positives = 429/1043 (41%), Gaps = 179/1043 (17%)

Query: 2    ACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQ 61
            + + IP    + EV V+L++LP D +++  +L+ E+A  + W+II+  Y KQ +++   +
Sbjct: 33   SAIDIPASTFDSEVEVSLEELPDDPTELCTLLENEKAAKNFWVIISLAYAKQNQLDHAIE 92

Query: 62   ILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQ-------------REKEE 108
            IL++G    +         E++ +LN    +  +L  I+++Q             + K+ 
Sbjct: 93   ILQKG----LASVAHGATKEKLGLLN----WLCWLLMIKSRQAPRVAPDGDSSGVKTKDY 144

Query: 109  HFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-----------------VEQASSAF 151
            +   AT   N+ASR++      ++ +G L L +                   VE    A 
Sbjct: 145  YLQQATSTLNEASRLNPAYTPLFLARGVLSLLRASLYPPRPVRAGIPDTSERVESLRQAL 204

Query: 152  KIVLEADR----DNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGA-IRLGIGLC 206
            K   EA +     NV A LG A  +++ G Y+++L  Y+  L   P       R+GIG C
Sbjct: 205  KCFEEASKASGGRNVMAHLGLARAQYSLGNYAEALLVYQTVLTRMPGLTDPDPRIGIGCC 264

Query: 207  RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGI---------RKGMEKM 257
             ++LG   +A+ A++RAL L+P++  A + +    L ++              R  M   
Sbjct: 265  LWQLGFKERAKDAWERALSLNPKSKVASILVGTYYLYSSSQRPTSDPQFGELYRVSMTHT 324

Query: 258  QRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHS 317
            Q + ++     MA    A +      +  VE L   A+  T+     S  +Y L R  H 
Sbjct: 325  QGSLKLDKDYPMACARFAGYKLIRKDYKAVEVLARKAIEQTDVVSIASEGWYLLGRKAHY 384

Query: 318  KGDYEKAGLYYMASVKEINKPHEFIFP-YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNC 376
            +GD  KA  Y+  S +          P  +G+ Q+Q+K  D   A    EK+++    N 
Sbjct: 385  EGDTAKASEYFNRSDQARGGGDSGFLPAKFGVVQMQVKSKDLDGAKFRLEKIIQ-QSKNP 443

Query: 377  ETLKALGHIYVQ---------------------LGQIEKAQELLRKAAKIDPRDAQAFID 415
            E +  LG +  +                     +  +E  + L +   K  P D    I 
Sbjct: 444  ECMALLGALLAEDVFSAQASGSKDDKSADATKAISLLESVRSLWKDPTKNIPPDESVLIY 503

Query: 416  LGELLISSDTGAALDAFKTARTL-------------------LKKA-GEEVPIEVLNNIG 455
            L  L  S+    ++        +                   LK A  E +P ++LNNIG
Sbjct: 504  LSRLYESTSPEKSMQCLTQLEEIQMEQIPDQERPHENLQNGELKAALREHLPPQLLNNIG 563

Query: 456  VIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDG 515
               ++ G+   A + F+ AL      T  D   +     A+ ++L               
Sbjct: 564  CFLYQSGKVAQARELFQSAL------TACDKSEEVEGEKATDALL--------------- 602

Query: 516  NHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNL 575
                      T+ +N AR LE +     A  +Y  +L ++ DY +A  R+  IA  ++  
Sbjct: 603  ---------TTIRYNFARCLEALDLPDEAKKVYESLLERHGDYTEASARMTYIALRQSPT 653

Query: 576  QLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGK--------- 626
                + + +  + +       ++ G        W  +K   R A+ A D +         
Sbjct: 654  DEGPKKMAKLYERDSTNLEVRALFG--------WYLSKSKKRVANLAEDHEQRHYKHTLQ 705

Query: 627  -----DSYATLSLGNWNYFAA--LRNEKRAPKLEATHL-EKAKELYTRVIVQHTSNLYAA 678
                 D YA   +GN +   A  +R E  A K +   + E+A E + + +     N YAA
Sbjct: 706  HFDKHDRYALTGMGNVHLLTARDMRRETDADKEKRRKMYERAVEFFDKALQLDPKNAYAA 765

Query: 679  NGAGVVLAE-KGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMY 737
             G  + L + +  F  +  +F+++++       ++   V++NL H Y     F  +++ Y
Sbjct: 766  QGIAIALVDDRKDFAGAVQIFSKIRDT------IKDASVYLNLGHAYAELKQFTRSIECY 819

Query: 738  QNCLRKFYYNTDAQILLYLARTHY---EAEQWQDCKKSLL----RAIHLAPSNYTLRFDA 790
            +  L K     DAQ+L  L R  +   + E+     K+ L    RA+ +AP    L F+ 
Sbjct: 820  ETALSKDRAR-DAQLLACLGRVWWLRGKHEKNLTAMKTALDYANRALAVAPEQAHLEFNV 878

Query: 791  GVAMQKFS--ASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGFDEKKINTH 848
                 + +   ++L +T+RT  +++     LE A+  F+ ++    +    +  + +   
Sbjct: 879  AFVQNQVALLVNSLPETQRTLQDLQEAAEGLEKAIETFTRIA---QVKTPPYPRESLEQR 935

Query: 849  VEYCKHLLDAAKIHREAAEREEQQNRQ--RQEAARQAALAEEARRKAEEQKKYLLE---K 903
                ++ + + ++ R    ++E +++   + + AR A  AE  RR+ E +K   LE   K
Sbjct: 936  ANMGRNTI-SKQLERSIQNQKEYEDKNALKLQQARAAREAELKRREEEVRKAQELENERK 994

Query: 904  RKLEDEQKRLRQQEEHFQRVKAR 926
            R+L +E++R+    E  QR+ A+
Sbjct: 995  RRLAEERQRII---EETQRLAAK 1014


>gi|340522553|gb|EGR52786.1| predicted protein [Trichoderma reesei QM6a]
          Length = 1191

 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 224/951 (23%), Positives = 389/951 (40%), Gaps = 179/951 (18%)

Query: 2   ACVYIPVQNSEEE--VRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQF 59
           + + IPVQ  +E+  V + L+ L  D +++  + + E A    W+ +A  Y KQ K++  
Sbjct: 31  SAIDIPVQGDQEDEAVEIDLEDLVDDPTELCTLFENEHAAKTYWMTVALAYAKQHKIDHA 90

Query: 60  RQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYL----------GKIETKQREKEEH 109
            ++L  G     +   +    ++++++  L   Y +           G   T+ + KE +
Sbjct: 91  IEMLIRGG----NAIQSSNPRDKVSMICCLCWMYLWKSREAPRVAPDGVPATEAKTKEYY 146

Query: 110 FILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVE------------------QASSAF 151
             LAT   N A+R++   P  ++ +G LLL +  ++                   A+ AF
Sbjct: 147 LQLATSSLNDAARLNPSFPPIFLARGVLLLLRASLQGPSKTAGGLGTEKSELLKNAAKAF 206

Query: 152 KIVLEADR-DNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSC--PGAIRLGIGLCRY 208
              L   +  N+ AL+G+A   F+  +Y ++L  Y+  LQ  P    P   R+GIG C +
Sbjct: 207 DDALRVSQGKNLLALMGKARTLFSMHKYPEALAAYQDVLQKRPDLVDPDP-RIGIGCCFW 265

Query: 209 KLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKG----------MEKMQ 258
           +LG    A+ A++R L+++P++  A + L +  L A+    +             +E  Q
Sbjct: 266 QLGFKEDAKVAWERCLEINPDSKIANILLGLYYLDASGHVPVNSDEFLKLYKTAMIEYTQ 325

Query: 259 RAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSK 318
           +AF++     +     A++F         ++L   A+  T+     S  +Y LAR  H  
Sbjct: 326 KAFKLDKEVPITCVTFASYFLSRKAWDNADKLAHKAIQYTDVNAVASDGWYLLARKAHYN 385

Query: 319 GDYEKAGLYYMASVKEINKPHEFIFP-YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCE 377
           GD E+A  YY  +            P  +G+ Q+ +   D   A    EK+++    N E
Sbjct: 386 GDLERASDYYRRADDARGGTETGYLPAKFGVAQLSVIKNDLGEAKLRLEKIIQ-QSKNHE 444

Query: 378 TLKALGHIYVQ--------------LGQIEKAQELL---RKAAKIDPR-----DAQAFID 415
            +  LG IY +                +++KA  LL   R + K DP+     DA   ++
Sbjct: 445 AMILLGTIYAEEIFTSQNNDNKEDRSAEMKKAIALLEGVRNSWK-DPKKALSPDASVLLN 503

Query: 416 LGELLISSDTGAALDAFKTARTL-LKKAGEE------------------VPIEVLNNIGV 456
           L  L  +     AL   +    L +++  E                   +P ++LNN+G 
Sbjct: 504 LARLYETDSPDKALQCLQQVEQLEIEQIPESERPTDVPEAEVQAALRKFLPPQLLNNVGC 563

Query: 457 IHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGN 516
            HF+  ++E A + F+ ALG       + +  K   +D  A +                 
Sbjct: 564 FHFQAEKYELASEMFEAALG-----ACMRAGEKDPTMDTDALV----------------- 601

Query: 517 HVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQ 576
                    T+ FNL R  E    T  A  +Y  +L ++ DY DA  RLA I K R N  
Sbjct: 602 --------TTISFNLGRSYEARGLTDKAVEVYEGLLNRHDDYTDARTRLAYI-KLRKN-- 650

Query: 577 LSIELVNEALKVNGKYPNALSML-----GDLELKN-DDWV--KAKETFRAASDATDGK-- 626
                       N + P+A++ L      DLE++    W   K     R A+ A D +  
Sbjct: 651 -----------PNKEGPDAVAKLYQENTADLEVRALYGWYLGKVHSRKRPANIAEDHEFR 699

Query: 627 ------------DSYATLSLGNWNYFAALRNEKRAPKLE----ATHLEKAKELYTRVIVQ 670
                       D YA + +GN  Y    R  +R  + E    +    KA E + + +  
Sbjct: 700 HYKHTLQNYDKHDRYALVGMGNL-YLVQAREMRRETEQEKQKRSATYSKAVEFFEKALSL 758

Query: 671 HTSNLYAANGAGVVLAE-KGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGN 729
              N YAA G  + L E K  +  +  +F QV++       V+   +++NL H+Y     
Sbjct: 759 DPKNAYAAQGIAIALVEDKRDYKTALTIFNQVKDT------VKDAHLYVNLGHIYAELKQ 812

Query: 730 FALAMKMYQNCLRKFYYNTDAQILLYLART-------HYEAEQWQDCKKSLLRAIHLAPS 782
           F+ A++ Y+  L K     D  IL  L RT         + + +    +   +A+ +AP 
Sbjct: 813 FSKAIEHYEIALSKEGKANDPVILSCLGRTWLNRGRADRDVDSYIKALECAKKALEVAPD 872

Query: 783 NYTLRFD-AGVAMQKFSA-STLQKTRRTADEVRSTVAELENAVRVFSHLSA 831
               +F+ A V +Q  +    L + RRTA+++      LE A+     ++A
Sbjct: 873 QIHYQFNVAFVQIQLVTMIQALPENRRTAEQLEDASQGLEAAIESLDKIAA 923


>gi|46125141|ref|XP_387124.1| hypothetical protein FG06948.1 [Gibberella zeae PH-1]
          Length = 1219

 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 228/945 (24%), Positives = 394/945 (41%), Gaps = 170/945 (17%)

Query: 4   VYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQIL 63
           + IP   ++E V + L+ L  + +D+  +L+ E A    W+ +A  Y KQ KV+   ++L
Sbjct: 34  IPIPSGEADEAVEINLEDLVDEPADLCTLLENENAAKTYWMTVALAYAKQHKVDHAIEML 93

Query: 64  EEGSSPEIDEYYADVRYERIAILNALGVYYTYL----------GKIETKQREKEEHFILA 113
           + G + EI +  A+ R +R++++  L   Y +           G   ++ + KE +  LA
Sbjct: 94  QRGGN-EIQKNSANPR-DRVSMVCCLCWMYLWKSREAPRVAPEGTPVSEAKTKEYYLQLA 151

Query: 114 TQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQAS---------------SAFKIVLEAD 158
           T   N A+R++   P  ++ +G LLL +  ++  S               +A K   +A 
Sbjct: 152 TSSLNDAARLNPSFPPIFLARGVLLLLRASLQAPSKTAGGIGSEKHELLKTAVKSFDDAL 211

Query: 159 R----DNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS-CPGAIRLGIGLCRYKLGQL 213
           R     N+ AL+G+A   F+  +Y +SL  Y+  LQ  P       R+GIG C ++LG  
Sbjct: 212 RVSQGKNMLALMGKARALFSMHKYPESLTIYQDVLQKMPDLVDPDPRIGIGCCFWQLGFK 271

Query: 214 GKARQAFQRALQLDPENVEALVALAVMDLQANEAAGI---------RKGM-EKMQRAFEI 263
             A+ A++R L+++P +  A + L +  L A+    +         +K M E  Q++F++
Sbjct: 272 DDAKMAWERCLEINPNSKVANILLGLYYLDASGHVPVNSDNFLKLYKKAMTEYAQKSFKL 331

Query: 264 YPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEK 323
                +  +  + +F        V++L   A+  T+     S  +Y LAR  H  GD E+
Sbjct: 332 DKDVPLTCSTFSGYFLSRKAWDNVDKLAHKAIQYTDVNAIASDGWYLLARKEHYTGDIER 391

Query: 324 AGLYYMASVKEINKPHEFIFP-YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKAL 382
           A  YY  + +          P  +G+ Q+ +   D   A    EK+++    N E +  L
Sbjct: 392 AADYYRRADEARGGTETGYLPAKFGVAQLSVMKNDLGEAKLRLEKMIQ-QSKNHEAMILL 450

Query: 383 GHIYVQ---LGQIEKAQE----LLRKAAKI---------DPR-----DAQAFIDLGELLI 421
           G +Y +     Q+  ++E     L+KA  +         DP+     DA   ++L  L  
Sbjct: 451 GTLYAEEVFANQVSDSKEDKSAELKKAITLLESVRNAWKDPKRALSPDASVLLNLARLYE 510

Query: 422 SSDTGAALDAFKTARTL-------------LKKAGE-------EVPIEVLNNIGVIHFEK 461
           +     AL   +    L             +  A E        +P ++LNNIG  H + 
Sbjct: 511 TDQPDKALQCLQQVEQLELDQVPDSEQPEDVTDAAEIKAALRKSLPPQLLNNIGCFHSQA 570

Query: 462 GEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELP 521
            + E A   F+ ALG  I +   D    T   DA  S                       
Sbjct: 571 EKHELASDMFEAALGACIKIGEKDPDMDT---DALVS----------------------- 604

Query: 522 WNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIEL 581
               T+ FNLAR  E    T  A+ +Y  +L ++ DY DA  RLA I K R N       
Sbjct: 605 ----TISFNLARSYESRGLTDKATEVYEGLLARHDDYTDARARLAYI-KLRKN------- 652

Query: 582 VNEALKVNGKYPNALSML-----GDLELKN-DDWV--KAKETFRAAS---DAT------- 623
                  N + P+A++ L      DLE++    W   K     R A+   DA        
Sbjct: 653 ------PNKEGPDAVAKLYQENNTDLEVRALYGWYLGKVHSRKRPANLNEDAEFRHYKHT 706

Query: 624 ----DGKDSYATLSLGNWNYFAA--LRNEKRAPKLEATHL-EKAKELYTRVIVQHTSNLY 676
               D  D +A + +GN     A  +R E  + K + + +  KA E + + +     N Y
Sbjct: 707 LQNYDKHDRHALVGMGNLYLMQAREMRRESDSDKQKRSAIYAKAVEFFEKALSLDPKNAY 766

Query: 677 AANGAGVVLAE-KGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMK 735
           AA G  + L E K     +  +F +V+E    S       +++NL H++     ++ A++
Sbjct: 767 AAQGIAIALVEDKKDHKSALGIFNKVRETLRDS------HLYVNLGHIFAELRQYSKAIE 820

Query: 736 MYQNCLRKFYYNTDAQILLYLART-------HYEAEQWQDCKKSLLRAIHLAPSNYTLRF 788
            Y+  L K     D  IL  L RT         + + +    +   +A+ +AP     +F
Sbjct: 821 HYEIALSKDGKKDDPTILACLGRTWLNRGRAERDVDSYNKALECAQKALGVAPEQVHYKF 880

Query: 789 D-AGVAMQKFS-ASTLQKTRRTADEVRSTVAELENAVRVFSHLSA 831
           + A V +Q  +    L + +R+ +++      LE+A+     ++A
Sbjct: 881 NVAFVQIQLVTLVQGLPENKRSTEQLEKAAEGLESAITSLDEIAA 925


>gi|262302895|gb|ACY44040.1| SH2 domain binding protein [Semibalanus balanoides]
          Length = 178

 Score =  166 bits (419), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 81/178 (45%), Positives = 113/178 (63%)

Query: 147 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 206
           A + F  VL     ++P+LLG+AC+ FN+  Y  +L FYK+AL+ +P CP  +RLG+G C
Sbjct: 1   ADAQFNFVLNQSPSSIPSLLGKACIAFNKKDYKGALAFYKKALRTNPQCPADVRLGMGHC 60

Query: 207 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY 266
             KLG   KAR AF+RAL+LD   V ALV LA+++L   +   IR G++ + RA+ I P 
Sbjct: 61  FLKLGNADKARLAFERALELDANCVGALVGLAILELNNKQPESIRSGVKMLSRAYTIDPT 120

Query: 267 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 324
             M LN+LANHFFF   +  V+QL   AL  T +   ++ S Y LAR++H + DYEKA
Sbjct: 121 NPMVLNHLANHFFFKKDYVKVQQLATYALYNTENDAMRAESCYQLARAFHVQADYEKA 178


>gi|262302941|gb|ACY44063.1| SH2 domain binding protein [Loxothylacus texanus]
          Length = 178

 Score =  166 bits (419), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 81/178 (45%), Positives = 115/178 (64%)

Query: 147 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 206
           A + F  VL    +++P+LLG+AC+ F +  Y  +L FYK+AL+ +P CP  +RLG+G C
Sbjct: 1   ADTQFNFVLNQSPNSIPSLLGKACIAFYKKDYKGALAFYKKALRTNPRCPADVRLGMGHC 60

Query: 207 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY 266
             KLG + KAR AF+RAL+LD   V ALV L+V++L   +   IR G++ + RA+ I P 
Sbjct: 61  FLKLGNVDKARLAFERALELDVNCVGALVGLSVLELNNKQPESIRNGVQMLSRAYTIDPT 120

Query: 267 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 324
             M LN+LANHFFF   +  V+QL   AL  T +   ++ S Y LAR++H +GDYEKA
Sbjct: 121 NPMVLNHLANHFFFKKDYVKVQQLATYALYNTENDAMRAESCYQLARAFHVQGDYEKA 178


>gi|396495033|ref|XP_003844448.1| hypothetical protein LEMA_P020990.1 [Leptosphaeria maculans JN3]
 gi|312221028|emb|CBY00969.1| hypothetical protein LEMA_P020990.1 [Leptosphaeria maculans JN3]
          Length = 1180

 Score =  166 bits (419), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 229/931 (24%), Positives = 393/931 (42%), Gaps = 166/931 (17%)

Query: 14  EVRVALDQ-LPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQILEEGSSPEID 72
           +V + LD+ +  D +++  IL+ E++    W+ +A  Y K  KV     +L +       
Sbjct: 44  DVEIPLDEDIQDDPTELCAILENEKSLTSTWVKVAVAYAKHKKVHVAIDVLSQAI----- 98

Query: 73  EYYADVRYE-RIAILNALGVYYTYLGKIETKQREKEE------------HFILATQYYNK 119
           + + + R E R++ILN  G+ + YL K     R K++            +   AT   N 
Sbjct: 99  QVFGNARGEDRLSILN--GLCWLYLLKCREAPRTKQDSQTDPDVKLKDYYLQAATSVLND 156

Query: 120 ASRIDMHEPSTWVGKGQLLLAKGEVE--------------------QASSAFKIVLEADR 159
           ASRI    P  ++ +G L L +  ++                    QA+  F+  L A  
Sbjct: 157 ASRISPSHPPLFLARGVLYLLRASLQGPATTAGPNAVSPERMETLKQAAKCFEDALRASG 216

Query: 160 D-NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSC--PGAIRLGIGLCRYKLGQLGKA 216
             N+ A +G+A V ++ G+++D+L+ Y+  L+  P    P   R+GIG C ++LG    A
Sbjct: 217 GRNLMAKMGKARVHYSMGKWADALKGYQNILESSPDMLDPDP-RIGIGCCFWQLGFKHDA 275

Query: 217 RQAFQRALQLDPENVEALVALAV--MDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYL 274
             A+QR+L+L+P++  AL  L +  + L A+ ++   K +E  ++A   Y   +  L+  
Sbjct: 276 AGAWQRSLELNPKSKIALTLLGIYNLHLTASYSSTDPKFVELYKKAINQYIVPSTKLD-- 333

Query: 275 ANHFFFT----GQHFLVEQ---LTET----ALAVTNHGPTKSHSYYNLARSYHSKGDYEK 323
            N F  T    G HFLV +    TET    A+++T+     S  ++  A+  H + D  K
Sbjct: 334 -NQFPLTCATLGSHFLVRRDFAKTETVAMRAISLTDTNAIASDGWHLRAKKAHHEEDIAK 392

Query: 324 AGLYYMASVK-EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKAL 382
           A  YY  S +    +   FI   +GL Q+ + + ++  A    EK+L+  P   E    L
Sbjct: 393 AAEYYSKSDQARGGEERGFIPAKFGLAQMNVLMSNYDGAKFRLEKILQQSP-VLEAQTLL 451

Query: 383 GHIYVQ---LGQIEKAQE----LLRKAAKI---------DPR-----DAQAFIDLGELLI 421
           G +Y +     Q  K+ E     LRKA K          DP+     D    ++L  L  
Sbjct: 452 GTLYAEDVFAAQNSKSTEDKSAELRKALKYLETVQSAWKDPKRKAVPDQSVLLNLARLYE 511

Query: 422 SSDTGAALDAFKTARTLLKKA--------GEEVPIEV------------LNNIGVIHFEK 461
                 +L   +    +   A        G E PI+V            LNN+G  H++ 
Sbjct: 512 IDHPEKSLRCLEEVEQMELDAIPEEDYPEGIEDPIQVKAALREFLPPHLLNNMGCFHYQA 571

Query: 462 GEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELP 521
             F +A + F+ AL        + ++++   ID  A +                      
Sbjct: 572 DRFVTAREFFQTALN-----ACVKAESRDEGIDTDALV---------------------- 604

Query: 522 WNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIEL 581
               ++ +NLAR  E       A  +Y  +L ++ DY+DA LRLA I+   N        
Sbjct: 605 ---TSISYNLARTYEAEGMWKDARSVYDSLLQRHGDYIDARLRLAYISLRENPEGEGPRA 661

Query: 582 VNEALKVNGKYPNALS----MLGDLELKNDDWVKAKET--FRAASDATDGKDSYATLSLG 635
           V +  K N       +    ML   + +   +V  +E   ++      D  D+Y+ + +G
Sbjct: 662 VKDLFKANEDNTEVRALYGWMLNKTKRRTSQFVTDEEQRHYKHTLQKFDKHDAYSLMGMG 721

Query: 636 NWNYFAALRNEKRAPKLEA----THLEKAKELYTRVIVQHTSNLYAANGAGVVLAE-KGQ 690
           N    A  R   R+ + E        E+A E + +V+     N YAA G  + L E K  
Sbjct: 722 NIT-LAIAREMPRSSEQEKEKRRKQYERAVEFFEKVLQIDPRNAYAAQGIAIALVEDKRD 780

Query: 691 FDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDA 750
           +  +  +FT+V+E       ++   V+ NL H Y     +  A++ Y+  L +   N D 
Sbjct: 781 YSTALQIFTKVKET------LKDHSVYTNLGHTYCEIKQYNRAIENYEAALARDRQN-DP 833

Query: 751 QILLYLARTHYEAEQWQDCKKSLLRA-------IHLAPSNYTLRFDAGVAMQKFSAST-- 801
           +IL  L RT Y   + ++       A       + + P++ + +F+  VA  +F  +T  
Sbjct: 834 KILQCLGRTWYLRARHENSMAGFRTALDYSKQVLSIMPTDLSAQFN--VAFLQFQVATVL 891

Query: 802 --LQKTRRTADEVRSTVAELENAVRVFSHLS 830
             L + +RT +EV S +  L  A+     L+
Sbjct: 892 YNLPENQRTLEEVDSAIVGLAEAIDTMDKLA 922


>gi|119498583|ref|XP_001266049.1| RNA polymerase II transcription elongation factor (Ctr9), putative
            [Neosartorya fischeri NRRL 181]
 gi|119414213|gb|EAW24152.1| RNA polymerase II transcription elongation factor (Ctr9), putative
            [Neosartorya fischeri NRRL 181]
          Length = 1198

 Score =  166 bits (419), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 241/1032 (23%), Positives = 424/1032 (41%), Gaps = 179/1032 (17%)

Query: 2    ACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQ 61
            + + IP    + EV V+L+ LP D +++  +L+ E+A  + W+IIA  Y KQ +++    
Sbjct: 33   SAIDIPASTLDSEVEVSLEGLPDDPTELCTLLENEKAAKNFWVIIALAYAKQKQLDHAID 92

Query: 62   ILEEGSSPEIDEYYADVRYERIAILNAL----------GVYYTYLGKIETKQREKEEHFI 111
            IL +G    +         E++ +L  +                 G++ T+ + K+ +  
Sbjct: 93   ILNKG----LASVGHGAAKEKLGLLGWVCWLLMLKSRQAPRVASEGELYTEAKTKDYYLQ 148

Query: 112  LATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-----------------VEQASSAFKIV 154
            LAT   N+ASR++   P  ++ +G L L +                   VE    A K  
Sbjct: 149  LATSTLNEASRLNPAFPPLFLARGVLCLLRASLHPPRPVRPGSVDTSERVESLRQALKCF 208

Query: 155  LEADR----DNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGA-IRLGIGLCRYK 209
             E+ +     NV A+LG+A  ++  GRY+++LE Y++ L   P       R+GIG C ++
Sbjct: 209  EESSKAFGGRNVMAILGRARAQYLLGRYAEALEGYQKVLMKMPGLTDPDPRIGIGCCLWQ 268

Query: 210  LGQLGKARQAFQRALQLDPENVEALVALAVMDL-------QANEAAG--IRKGMEK-MQR 259
            LG   +A+ A++RAL ++P++  A + LAV  L         + A G   +  M +  Q+
Sbjct: 269  LGFKDQAKVAWERALAVNPDSKVANILLAVYYLYDSSRHATTDPAFGSLYKVAMTQYTQK 328

Query: 260  AFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 319
            AF++     M      ++F     +  VE L   A+  T+     S  +Y L R  H +G
Sbjct: 329  AFKLDKEYPMTCGLFGSYFLLRKSYSTVETLARKAIEHTDVMAIASDGWYLLGRKAHYEG 388

Query: 320  DYEKAGLYYMASVKEINKPHEFIFP-YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCET 378
            D  +A  YY  S +      +   P  +G  Q+Q+   ++  A    EK+++    N E 
Sbjct: 389  DLARAAEYYSRSDQARGGGDKGYLPAKFGAVQMQVSNRNYDDAKFRLEKIIQ-QTKNPEC 447

Query: 379  LKALGHIYVQ---------------------LGQIEKAQELLRKAAKIDPRDAQAFIDLG 417
            +  LG ++ +                     +  +E  + L +  AK    D    + L 
Sbjct: 448  MILLGALHAEEVFAAQASGSKEDKSAEAKKAISLLESVRSLWKDEAKKVSADESVLVYLS 507

Query: 418  ELLISSDTGAALDAFKTARTL-LKKAGEE-------------------VPIEVLNNIGVI 457
             L        ++        + L +  EE                   +P ++LNN+G  
Sbjct: 508  RLYEQVAPEKSMQCLTQLEEMQLAEIAEEERPEGIEDEEELKAVLRTNLPPQLLNNMGCF 567

Query: 458  HFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNH 517
             ++  + E A   F+ AL        + S+ K   +D  A +                  
Sbjct: 568  MYQADKVEQARTLFQAALN-----ACVRSQEKEAELDTDALV------------------ 604

Query: 518  VELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQL 577
                    T+ +NL R  E  +    A  +Y  +L ++ DY +A  R+  IA       L
Sbjct: 605  -------TTISYNLGRAYEASNMQDEAKKVYEGLLERHADYTEANARVTYIA-------L 650

Query: 578  SIELVNEALKVNGKYPNALSMLGDLELKND-DWVKAKETFRAASDATDGK---------- 626
                 +E  K   K   A S   +LE++    W  +K   RAA+ A D +          
Sbjct: 651  RQSPTDEGPKKMAKLYEADST--NLEVRALFGWYLSKSKKRAANLAEDHEQRHYKHTLQY 708

Query: 627  ----DSYATLSLGNWNYFAALRNEKRAPKLEATH----LEKAKELYTRVIVQHTSNLYAA 678
                D Y+   +GN  + A  R+ +R    +        E+A E + + +     N YAA
Sbjct: 709  FDKHDRYSLTGMGNV-HLATARDMRRDTDQDKEKRRKMYERAVEFFDKALQLDPKNAYAA 767

Query: 679  NGAGVVLA-EKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMY 737
             G  + L  +K     +  +F++V++       ++ P V++NL HVY     ++ +++ Y
Sbjct: 768  QGIAIALVDDKKDHAGAVHIFSKVRDT------LRDPSVYLNLGHVYAELRQYSRSIEHY 821

Query: 738  QNCLRKFYYNTDAQILLYLART---HYEAEQWQDCKKSLL----RAIHLAPSNYTLRFDA 790
            +  L K     DAQIL  L R      + E      K+ L    RA  +AP+   L F+ 
Sbjct: 822  EAALSKDRAR-DAQILACLGRVWLLKGKQEMNLSAMKTALDYAKRAHAVAPAQAHLEFNV 880

Query: 791  GVAMQKFS--ASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASN-LHLHGFDEKKINT 847
                 + +  A +L +T++T  +V      L  A+  F  ++   N  +  G  E++ N 
Sbjct: 881  AFVQNQIASLAYSLPETQKTVQDVEEAAEGLHQAIETFGRIAKVKNPPYPAGALEQRANM 940

Query: 848  HVEYCKHLLDAAKIHRE-----------AAEREEQQNRQRQEAARQAALAEEARRK--AE 894
                 K L  A +  +E           A E  E + R+R+E  R+A  AE+ R+K  AE
Sbjct: 941  GKTIIKQLERALQSQKEYEEKNAAKLQQAREAREAEIRKREEEVRKAQEAEQERKKKLAE 1000

Query: 895  EQKKYLLEKRKL 906
            E+++ + E ++L
Sbjct: 1001 ERQRMIEEAQRL 1012


>gi|159126221|gb|EDP51337.1| RNA polymerase II transcription elongation factor (Ctr9), putative
            [Aspergillus fumigatus A1163]
          Length = 1195

 Score =  165 bits (418), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 240/1035 (23%), Positives = 432/1035 (41%), Gaps = 185/1035 (17%)

Query: 2    ACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQ 61
            + + IP    + EV V+L+ LP D +++  +L+ E+A  + W+IIA  Y KQ +++    
Sbjct: 30   SAIDIPASTLDSEVEVSLEGLPDDPTELCTLLENEKAAKNFWVIIALAYAKQKQLDHAID 89

Query: 62   ILEEGSSPEIDEYYADVRYERIAILNAL----------GVYYTYLGKIETKQREKEEHFI 111
            IL +G    +         E++ +L  +                 G++ T+ + K+ +  
Sbjct: 90   ILNKG----LASVGHGAAKEKLGLLGWVCWLLMLKSRQAPRVASEGELYTEAKTKDYYLQ 145

Query: 112  LATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-----------------VEQASSAFKIV 154
            LAT   N+ASR++   P  ++ +G L L +                   VE    A K  
Sbjct: 146  LATSTLNEASRLNPAFPPLFLARGVLCLLRASLHPPRPVRPGSVDTSERVESLQQALKCF 205

Query: 155  LEADR----DNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGA-IRLGIGLCRYK 209
             E+ +     NV A+LG++  ++  GRY+++LE Y++ L   P       R+GIG C ++
Sbjct: 206  EESSKAFGGRNVMAILGRSRAQYLLGRYAEALEGYQKVLMKMPGLTDPDPRIGIGCCLWQ 265

Query: 210  LGQLGKARQAFQRALQLDPENVEALVALAVMDL-------QANEAAG--IRKGMEK-MQR 259
            LG   +A+ A++RAL ++P++  A + LAV  L         + A G   +  M +  Q+
Sbjct: 266  LGFKDQAKVAWERALAVNPDSKVANILLAVYYLYDSSRHATTDPAFGSLYKVAMTQYTQK 325

Query: 260  AFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 319
            AF++     M      ++F     +  VE L   A+  T+     S  +Y L R  H +G
Sbjct: 326  AFKLDKEDPMTCALFGSYFLLRKSYSTVETLARKAIEHTDVMAIASDGWYLLGRKAHYEG 385

Query: 320  DYEKAGLYYMASVKEINKPHEFIFP-YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCET 378
            D  +A  YY  + +      +   P  +G  Q+Q+   ++  A    EK+++    N E 
Sbjct: 386  DLARAAEYYSRADQARGGGDKGYLPAKFGTVQMQVSNQNYDDAKFRLEKIIQ-QTKNPEC 444

Query: 379  LKALGHIYVQ--------------LGQIEKAQELLR--------KAAKIDPRDA------ 410
            +  LG ++ +                + +KA  LL         +A K+ P ++      
Sbjct: 445  MILLGALHAEEVFAAQASGSKEDKSAEAKKAISLLESVRSLWKDEAKKVSPDESVLVYLS 504

Query: 411  ------------QAFIDLGELLIS----SDTGAALDAFKTARTLLKKAGEEVPIEVLNNI 454
                        Q    L E+ ++     +    ++  +  + +L+     +P ++LNN+
Sbjct: 505  RLYEQVAPEKSMQCLTQLEEMQLAEIAEEEHPEGIEDEEELKAVLRT---NLPPQLLNNM 561

Query: 455  GVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFEND 514
            G   ++  + E A   F+ AL        + S+ K   +D  A +               
Sbjct: 562  GCFMYQADKVEQARTLFQAALN-----ACVRSQEKEAQLDTDALV--------------- 601

Query: 515  GNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNN 574
                       T+ +NL R  E  +    A  +Y  +L ++ DY +A  RL  IA     
Sbjct: 602  ----------TTISYNLGRAYEASNMQDEAKKVYEGLLERHADYTEANARLTYIA----- 646

Query: 575  LQLSIELVNEALKVNGKYPNALSMLGDLELKND-DWVKAKETFRAASDATDGK------- 626
              L     +E  K   K   A S   +LE++    W  +K   RAA+ A D +       
Sbjct: 647  --LRQSPTDEGPKKMAKLYEADST--NLEVRALFGWYLSKSKKRAANLAEDHEQRHYKHT 702

Query: 627  -------DSYATLSLGNWNYFAALRNEKRAPKLEATH----LEKAKELYTRVIVQHTSNL 675
                   D Y+   +GN  + A  R+ +R    +        E+A E + + +     N 
Sbjct: 703  LQYFDKHDRYSLTGMGNV-HLATARDMRRDTDQDKEKRRKMYERAVEFFDKALQLDPKNA 761

Query: 676  YAANGAGVVLA-EKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAM 734
            YAA G  + L  ++     +  +F++V++       ++ P V++NL HVY     ++ ++
Sbjct: 762  YAAQGIAIALVDDRKDHAAAVHIFSKVRDT------LRDPSVYLNLGHVYAELRQYSRSI 815

Query: 735  KMYQNCLRKFYYNTDAQILLYLART---HYEAEQWQDCKKSLL----RAIHLAPSNYTLR 787
            + Y+  L K     DAQIL  L R      + E      K+ L    RA  +AP+   L 
Sbjct: 816  EHYEAALSKDRAR-DAQILACLGRVWLLKGKQEMNLSAMKTALDYAKRAHAVAPTQVHLE 874

Query: 788  FDAGVAMQKFS--ASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASN-LHLHGFDEKK 844
            F+      + +  A +L +T++T  +V      L  A+  F  ++   N  +  G  E++
Sbjct: 875  FNVAFVQNQIASLAYSLPETQKTVQDVEEAAEGLHQAIETFGRIAKVKNPPYPAGALEQR 934

Query: 845  INTHVEYCKHLLDAAKIHRE-----------AAEREEQQNRQRQEAARQAALAEEARRK- 892
             N      K L  A +  +E           A E  E + R+R+E  R+A  AE+ R+K 
Sbjct: 935  ANMGKTIIKQLERALQSQKEYEEKNAAKLQQAREAREAEIRKREEEVRKAQEAEQERKKK 994

Query: 893  -AEEQKKYLLEKRKL 906
             AEE+++ + E ++L
Sbjct: 995  LAEERQRMIEEAQRL 1009


>gi|402077257|gb|EJT72606.1| tetratricopeptide repeat protein 1 [Gaeumannomyces graminis var.
           tritici R3-111a-1]
          Length = 1220

 Score =  165 bits (418), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 226/939 (24%), Positives = 386/939 (41%), Gaps = 158/939 (16%)

Query: 3   CVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQI 62
            + +PVQ+ +E V + L+ L  D +D+ D+ + E A    W+ +A  Y K  K++   ++
Sbjct: 29  AIDVPVQDEDEAVEINLEDLVDDPTDLCDLFENESAARTYWMAVALAYAKLHKIDCAIEV 88

Query: 63  LEEGSSPEIDEYYADVRYERIAILNALGVYYTYL----------GKIETKQREKEEHFIL 112
           L  G S       A    E++ +++ L   Y +           G + ++ + KE +  L
Sbjct: 89  LTRGGSA----MQAQNPREKLGLVSCLCWMYLWKSREAPRLAPEGTLASEAKTKEFYLQL 144

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAK------------GEVEQAS-----SAFKIVL 155
           AT   N+ASRI+   P  ++ +G L L +            G V+ A      SA K   
Sbjct: 145 ATSTLNEASRINPAFPPLFLARGVLYLLRASLQVPMKPGQSGPVDAAKADLLRSALKSFE 204

Query: 156 EADR----DNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSC--PGAIRLGIGLCRYK 209
           +A R     N+ A++G++   F+ G+Y+++L  Y+  LQ  P    P   RLGIG C ++
Sbjct: 205 DAIRVSQGKNMLAVMGKSRALFSLGKYAEALAGYQDVLQRMPDMVDPDP-RLGIGACFWQ 263

Query: 210 LGQLGKARQAFQRALQLDPENVEALVALAVMDLQA------NEAAGIR---KGM-EKMQR 259
           LG    AR A++R L+++P++  A + L +  L A      N    IR   K M E  Q+
Sbjct: 264 LGYKDDARAAWERCLEINPDSKTANILLGLYYLDASGQVPTNSPEFIRLYKKAMTEYTQK 323

Query: 260 AFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 319
           +F++     +     A +F        V+ L   A+  T+     S  +Y LAR  H +G
Sbjct: 324 SFKLSKDLPLTCATFAGYFLSRKSFQNVDSLAHKAIQFTDVNAIASDGWYLLARKEHHEG 383

Query: 320 DYEKAGLYYMASVKEINKPHEFIFP-YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCET 378
           D +KA  YY  S            P  +G  Q+ +   D   A    EK+++      E 
Sbjct: 384 DVDKAADYYRRSDDARGGTERGYLPAKFGAAQLSVVKEDLGEAKLRLEKMIQ-QSRTYEA 442

Query: 379 LKALGHIYVQ--------------LGQIEKAQELLR--KAAKIDPR-----DAQAFIDLG 417
           +  LG +Y +               G+++KA  LL   +AA  D +     DA   + L 
Sbjct: 443 MILLGTLYAEEVFANQYATVKEDKSGEVKKAISLLEGVRAAWKDTKKNLAPDASVLLSLA 502

Query: 418 ELLISSDTGAALDAFKTARTLL--------KKAGEE------------VPIEVLNNIGVI 457
            L    +   AL   +    L         +  G E            +P ++LNNIG  
Sbjct: 503 RLYEVDNPDKALQCLQQVEQLETEQIAEADRPTGIEDEAELRAAVRKLLPPQLLNNIGCF 562

Query: 458 HFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNH 517
           H +    E+A   F+ ALG  + +   D +  T  +                        
Sbjct: 563 HSQNERHETASDMFEAALGACMRIQEGDEQMDTDAL------------------------ 598

Query: 518 VELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQL 577
                   T+ +NL R  E    +  A  +Y  +L ++ DY DA  R+A + K R   Q 
Sbjct: 599 ------VTTISYNLGRSYEARGLSDQAIEVYEGLLKRHDDYTDAKTRMAYL-KLRK--QP 649

Query: 578 SIELVNEALKVNGKYPNALSM-------LGDLELKNDDWVKAKET----FRAASDATDGK 626
           + E  +   K+  ++P  L +       LG +  +      A +     +R      D  
Sbjct: 650 NKEGPDAVAKLYQEHPADLEVRALYGWYLGKVHSRKRQVNIADDPELRHYRHTLQHYDKH 709

Query: 627 DSYATLSLGNWNYFAALRNEKR-----APKLEATHLEKAKELYTRVIVQHTSNLYAANGA 681
           D YA + +GN  Y A+ R  +R       K  AT+  +A E + + +     N YAA G 
Sbjct: 710 DCYALVGMGNL-YLASAREMRRETDQDKAKRSATY-NRAVEFFEKALQLDPKNAYAAQGI 767

Query: 682 GVVLAE-KGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNC 740
            + L E +     +  +F  V++       ++   V++NL H++     F  A++ Y+  
Sbjct: 768 AIALVEDRKDHKNALPIFLSVRDT------IKDAQVYVNLGHIFAELRQFTKAIENYEAA 821

Query: 741 LRKFYYNTDAQILLYLART---HYEAEQWQDCKKSLL----RAIHLAPSNYTLRFDAGVA 793
           L K     D  IL  L RT      +E+  D  K  L    +A+ +AP     +F+    
Sbjct: 822 LAKEGKANDPSILACLGRTWLNKARSERDLDAYKMALECAKKALDVAPEQVHFKFNVAFV 881

Query: 794 MQKFSAST--LQKTRRTADEVRSTVAELENAVRVFSHLS 830
             + + +   L +T+R+ ++++   A LE A+     ++
Sbjct: 882 QIQLATTINGLSETQRSLEQLQDAAAGLEAAIVALDEIA 920


>gi|70998646|ref|XP_754045.1| RNA polymerase II transcription elongation factor (Ctr9), putative
            [Aspergillus fumigatus Af293]
 gi|66851681|gb|EAL92007.1| RNA polymerase II transcription elongation factor (Ctr9), putative
            [Aspergillus fumigatus Af293]
          Length = 1195

 Score =  165 bits (418), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 241/1032 (23%), Positives = 427/1032 (41%), Gaps = 179/1032 (17%)

Query: 2    ACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQ 61
            + + IP    + EV V+L+ LP D +++  +L+ E+A  + W+IIA  Y KQ +++    
Sbjct: 30   SAIDIPASTLDSEVEVSLEGLPDDPTELCTLLENEKAAKNFWVIIALAYAKQKQLDHAID 89

Query: 62   ILEEGSSPEIDEYYADVRYERIAILNAL----------GVYYTYLGKIETKQREKEEHFI 111
            IL +G    +         E++ +L  +                 G++ T+ + K+ +  
Sbjct: 90   ILNKG----LASVGHGAAKEKLGLLGWVCWLLMLKSRQAPRVASEGELYTEAKTKDYYLQ 145

Query: 112  LATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-----------------VEQASSAFKIV 154
            LAT   N+ASR++   P  ++ +G L L +                   VE    A K  
Sbjct: 146  LATSTLNEASRLNPAFPPLFLARGVLCLLRASLHPPRPVRPGSVDTSERVESLRQALKCF 205

Query: 155  LEADR----DNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGA-IRLGIGLCRYK 209
             E+ +     NV A+LG++  ++  GRY+++LE Y++ L   P       R+GIG C ++
Sbjct: 206  EESSKAFGGRNVMAILGRSRAQYLLGRYAEALEGYQKVLMKMPGLTDPDPRIGIGCCLWQ 265

Query: 210  LGQLGKARQAFQRALQLDPENVEALVALAVMDL-------QANEAAG--IRKGMEK-MQR 259
            LG   +A+ A++RAL ++P++  A + LAV  L         + A G   +  M +  Q+
Sbjct: 266  LGFKDQAKVAWERALAVNPDSKVANILLAVYYLYDSSRHATTDPAFGSLYKVAMTQYTQK 325

Query: 260  AFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 319
            AF++     M      ++F     +  VE L   A+  T+     S  +Y L R  H +G
Sbjct: 326  AFKLDKEDPMTCALFGSYFLLRKSYSTVETLARKAIEHTDVMAIASDGWYLLGRKAHYEG 385

Query: 320  DYEKAGLYYMASVKEINKPHEFIFP-YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCET 378
            D  +A  YY  + +      +   P  +G  Q+Q+   ++  A    EK+++    N E 
Sbjct: 386  DLARAAEYYSRADQARGGGDKGYLPAKFGTVQMQVSNQNYDDAKFRLEKIIQ-QTKNPEC 444

Query: 379  LKALGHIYVQ--------------LGQIEKAQELLR--------KAAKIDPRDA------ 410
            +  LG ++ +                + +KA  LL         +A K+ P ++      
Sbjct: 445  MILLGALHAEEVFAAQASGSKEDKSAEAKKAISLLESVRSLWKDEAKKVSPDESVLVYLS 504

Query: 411  ------------QAFIDLGELLISSDTGAA-LDAFKTARTLLKKAGEEVPIEVLNNIGVI 457
                        Q    L E+ ++        +  K    L       +P ++LNN+G  
Sbjct: 505  RLYEQVAPEKSMQCLTQLEEMQLAEIAEEEHPEGIKDEEELKAVLRTNLPPQLLNNMGCF 564

Query: 458  HFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNH 517
             ++  + E A   F+ AL        + S+ K   +D  A +                  
Sbjct: 565  MYQADKVEQARTLFQAALN-----ACVRSQEKEAQLDTDALV------------------ 601

Query: 518  VELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQL 577
                    T+ +NL R  E  +    A  +Y  +L ++ DY +A  RL  IA       L
Sbjct: 602  -------TTISYNLGRAYEASNMQDEAKKVYEGLLERHADYTEANARLTYIA-------L 647

Query: 578  SIELVNEALKVNGKYPNALSMLGDLELKND-DWVKAKETFRAASDATDGK---------- 626
                 +E  K   K   A S   +LE++    W  +K   RAA+ A D +          
Sbjct: 648  RQSPTDEGPKKMAKLYEADST--NLEVRALFGWYLSKSKKRAANLAEDHEQRHYKHTLQY 705

Query: 627  ----DSYATLSLGNWNYFAALRNEKRAPKLEATH----LEKAKELYTRVIVQHTSNLYAA 678
                D Y+   +GN  + A  R+ +R    +        E+A E + + +     N YAA
Sbjct: 706  FDKHDRYSLTGMGNV-HLATARDMRRDTDQDKEKRRKMYERAVEFFDKALQLDPKNAYAA 764

Query: 679  NGAGVVLA-EKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMY 737
             G  + L  ++     +  +F++V++       ++ P V++NL HVY     ++ +++ Y
Sbjct: 765  QGIAIALVDDRKDHAAAVHIFSKVRDT------LRDPSVYLNLGHVYAELRQYSRSIEHY 818

Query: 738  QNCLRKFYYNTDAQILLYLART---HYEAEQWQDCKKSLL----RAIHLAPSNYTLRFDA 790
            +  L K     DAQIL  L R      + E      K+ L    RA  +AP+   L F+ 
Sbjct: 819  EAALSKDRAR-DAQILACLGRVWLLKGKQEMNLSAMKTALDYAKRAHAVAPTQVHLEFNV 877

Query: 791  GVAMQKFS--ASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASN-LHLHGFDEKKINT 847
                 + +  A +L +T++T  +V      L  A+  F  ++   N  +  G  E++ N 
Sbjct: 878  AFVQNQIASLAYSLPETQKTVQDVEEAAEGLHQAIETFGRIAKVKNPPYPAGALEQRANM 937

Query: 848  HVEYCKHLLDAAKIHRE-----------AAEREEQQNRQRQEAARQAALAEEARRK--AE 894
                 K L  A +  +E           A E  E + R+R+E  R+A  AE+ R+K  AE
Sbjct: 938  GKTIIKQLERALQSQKEYEEKNAAKLQQAREAREAEIRKREEEVRKAQEAEQERKKKLAE 997

Query: 895  EQKKYLLEKRKL 906
            E+++ + E ++L
Sbjct: 998  ERQRMIEEAQRL 1009


>gi|262302935|gb|ACY44060.1| SH2 domain binding protein [Limnadia lenticularis]
          Length = 178

 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 81/178 (45%), Positives = 118/178 (66%)

Query: 147 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 206
           A + F  VL    +N+P+LLG+AC+ FN+  Y  +L FYK+AL+ + +CP  +RLG+G C
Sbjct: 1   ADAQFNFVLNQSPNNIPSLLGKACISFNKKDYRGALAFYKKALRTNGNCPAGVRLGMGHC 60

Query: 207 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY 266
             KLG L KAR AF+RAL+LDP+ V ALV LA+++L  ++A  IR G++ + +A+ I   
Sbjct: 61  FVKLGNLEKARLAFERALELDPKCVGALVGLAILELNQHDAESIRTGVQLLSKAYTIDST 120

Query: 267 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 324
             M LN+LANHFFF  ++  V QL   A   T +   ++ S Y LARS+H +GDY++A
Sbjct: 121 NPMVLNHLANHFFFKKEYAKVLQLALHAFHNTENEAMRAESCYQLARSFHVQGDYDQA 178



 Score = 42.4 bits (98), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 62/135 (45%), Gaps = 10/135 (7%)

Query: 335 INKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCE--TLKALGHIYVQLGQI 392
           +N+    I    G   +     D+R AL  ++K L     NC       +GH +V+LG +
Sbjct: 9   LNQSPNNIPSLLGKACISFNKKDYRGALAFYKKALRT-NGNCPAGVRLGMGHCFVKLGNL 67

Query: 393 EKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKA---GEEVPIE 449
           EKA+    +A ++DP+   A + L  L ++       ++ +T   LL KA       P+ 
Sbjct: 68  EKARLAFERALELDPKCVGALVGLAILELNQHDA---ESIRTGVQLLSKAYTIDSTNPM- 123

Query: 450 VLNNIGVIHFEKGEF 464
           VLN++    F K E+
Sbjct: 124 VLNHLANHFFFKKEY 138


>gi|448537710|ref|XP_003871389.1| Ctr9 protein [Candida orthopsilosis Co 90-125]
 gi|380355746|emb|CCG25264.1| Ctr9 protein [Candida orthopsilosis]
          Length = 1129

 Score =  164 bits (416), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 196/810 (24%), Positives = 353/810 (43%), Gaps = 127/810 (15%)

Query: 24  RDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQILEEGSSPEIDEYYADVRYERI 83
           +D ++I+  L   ++    W+I+AR Y + GK+     I++     +      +   E I
Sbjct: 42  QDPAEIIQFLADTKSGKHYWIIVARAYAQLGKLVNAVHIIKSALESK------NFGNEDI 95

Query: 84  AILNALGVYYTYLGKIETKQREKEEHFI--------LATQYYNKASRIDMHEPSTWVGKG 135
             L +  ++  +  K  +   ++  H +        L+++ ++ A    ++  S ++ + 
Sbjct: 96  KTLQSFLIWLHF--KFASAGIDRSNHLVEASTEIASLSSRIHDDAQSSPVNNTSNFLSQA 153

Query: 136 QLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGR-YSDSLEFYKRALQVHPS 194
            L L +G  ++AS  F+ +L+ D+ N  ALLG+A    N+ + Y+++L+ Y++ L ++P+
Sbjct: 154 VLALYQGHDDEASQIFERILKIDQQNTFALLGKAQALLNKSKNYANALKLYQQVLVLNPA 213

Query: 195 CPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVAL-------AVMDLQANEA 247
                RLGIGLC + L     A QA++RAL+LDP+N++A + L       A  +  ++E 
Sbjct: 214 TKPDPRLGIGLCCWFLNDEKMAIQAWERALELDPKNLKARIFLNLAHFHEAFNNSWSDEE 273

Query: 248 --AGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETAL---------- 295
                +  + ++ +  +     A  L  LA++++       VE+L +  +          
Sbjct: 274 FITNYKACLNELAKIHKSNVNDATVLLVLASYYYSKNDFETVERLLKKVVKDITGDSSLT 333

Query: 296 AVTNHGPTKSHSYYN---------LARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYY 346
            +T H  +K+  Y +         L R   S+GD+ +A  Y+  ++K +N  +  I    
Sbjct: 334 KLTTH--SKASKYESNVLSECGTWLGRVKFSEGDFIQASRYFQEAIK-LNDLN--IVAKL 388

Query: 347 GLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAA 403
           GLGQ Q   G    A   FE +L    +  E   +LG IY +    +K   A ++L +  
Sbjct: 389 GLGQSQYNRGSVDEATLTFESILRSNANCLEANYSLGVIYAKQSSRKKKELAIQVLERYI 448

Query: 404 KI-------------------DPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGE 444
           ++                   +P    A++ L  L  S+D   AL     A     + G+
Sbjct: 449 RLSNNRGLSSSKNDADFLLNKEPVALNAYLTLSSLYESTDLSQALSYLNKAVEARNQVGK 508

Query: 445 EVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKD 504
           +VP+E+ NNIGV  F K  F+ A ++F+ A         +D       +     +L    
Sbjct: 509 DVPLEIYNNIGVFQFTKQNFKGALENFQVA---------IDKLDGAEFLSPDGDVL---- 555

Query: 505 MQLFHRFENDGNHVELPWN-KVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYL 563
                        ++LP + +V++ FN AR  E  ++  A    Y  +L +   Y  A L
Sbjct: 556 -------------IDLPSDLRVSLTFNSARTKELSNEKEALET-YESLLSECPHYFSAKL 601

Query: 564 R---LAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLG--------DLELKND-DWVK 611
           R   L+ I++     +     ++E LK+N       S  G         L +K D D   
Sbjct: 602 RILFLSCISETGLTPKEIQSEIDELLKLNASDLEIRSFYGWFAKNFGKKLGMKPDADTAF 661

Query: 612 AKETFRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEA---THLEKAKELYTRVI 668
            KET        D  D YA LSL   N +  L  + +   +E    T+  +A ELYT+V+
Sbjct: 662 QKETLV----EYDKHDCYALLSLA--NIYCVLARDLKGSSVEEKKRTYYVRATELYTKVL 715

Query: 669 VQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQG 728
                N+YAA G  +V  E  +     D+  +++++      +    V++NL HV     
Sbjct: 716 TVDRKNVYAAQGLAIVYIENKESTKGLDILRKIRDS------LNDISVYLNLGHVLCDVK 769

Query: 729 NFALAMKMYQNCLRKFYYNTDAQILLYLAR 758
            +  A++ Y+  L +F    D QIL +L R
Sbjct: 770 QYGKAIENYELALTRFTDGKDVQILTFLGR 799


>gi|262302885|gb|ACY44035.1| SH2 domain binding protein [Aphonopelma chalcodes]
          Length = 178

 Score =  164 bits (416), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 81/178 (45%), Positives = 115/178 (64%)

Query: 147 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 206
           A + F  VL    +N+P+LLG+AC+ FN+  Y  +L FYK+AL+ +P CP A+RLG+G C
Sbjct: 1   ADAQFNFVLNQSPNNIPSLLGKACIAFNKKDYRGALVFYKKALRTNPKCPAAVRLGMGHC 60

Query: 207 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY 266
            YKLG++ KAR AF+RALQLD + V ALV LAV++L       IR G++ + +A+ I   
Sbjct: 61  FYKLGKIDKARLAFERALQLDSQCVGALVGLAVLELNLKSPEAIRNGVQMLSKAYTIDLT 120

Query: 267 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 324
             M LN+LANHFFF   +  V+ L   A   T +   ++ S Y LARS+H + DY++A
Sbjct: 121 NPMVLNHLANHFFFKKDYSKVQHLALHAFHNTENEAMRAESCYQLARSFHIQNDYDQA 178


>gi|336469629|gb|EGO57791.1| hypothetical protein NEUTE1DRAFT_122149 [Neurospora tetrasperma
           FGSC 2508]
 gi|350290721|gb|EGZ71935.1| hypothetical protein NEUTE2DRAFT_111035 [Neurospora tetrasperma
           FGSC 2509]
          Length = 1277

 Score =  164 bits (416), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 244/1025 (23%), Positives = 431/1025 (42%), Gaps = 198/1025 (19%)

Query: 2   ACVYIPVQNSEEE-VRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFR 60
           + + IPVQ+ ++E V + L+ L  D +++  + + E A    W+ ++  Y KQ K++   
Sbjct: 39  STIDIPVQDQDDEAVEIDLEVLADDPTELCTLFEMEGAARTYWMTVSLAYAKQKKIDFAI 98

Query: 61  QILEEGSSPEIDEYYADVRYERIAILNALGVYYTYL----------GKIETKQREKEEHF 110
           ++L +G+    +   A+   E+++I++AL   Y +           G + ++ + KE + 
Sbjct: 99  EMLIKGA----NAMQANNPREKLSIVSALCWMYLWKSREAPRVAPEGALVSEAKTKEYYL 154

Query: 111 ILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSA-----------FKIVLEADR 159
            LATQ  N+ASRI+   P  ++ +G L L +  ++  S A            +  L++  
Sbjct: 155 QLATQSLNEASRINPAFPPLFLARGVLQLLRASLQPPSKAPGAVDPEKTETLRAALKSFD 214

Query: 160 D--------NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSC--PGAIRLGIGLCRYK 209
           D        N+ A++G+A   F+ GRY+D+L  Y+ AL   P    P   R+GIG C ++
Sbjct: 215 DALRVSSGKNMLAVIGKARALFSLGRYADALVAYQDALARAPDLVDPDP-RIGIGCCFWQ 273

Query: 210 LGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGI---------RKGM-EKMQR 259
           LG    AR A++RAL+++ E+    + L +  L A+    I         +K M E  Q+
Sbjct: 274 LGYKDDARIAWERALEINAESKVGNILLGLYYLDASGHVPINSPEFIKLYKKAMTEYTQK 333

Query: 260 AFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 319
           ++++     +     A++F    Q   VE L   A+  T+     S  +Y LAR  H   
Sbjct: 334 SYKLDKDLPLTCATFASYFLSRKQFDHVEALAHKAIQFTDVNAIASDGWYLLARKEHYAN 393

Query: 320 DYEKAGLYYMASVKEINKPHEFIFP-YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCET 378
           + E+A  YY  +            P  +G  Q+ +   D   A    EK+++    N E 
Sbjct: 394 NLERAADYYRRADDARGGTERGYLPAKFGAAQLSVIKNDLGEAKLRLEKMIQ-QSKNYEA 452

Query: 379 LKALGHIYVQ--------------LGQIEKAQELLR--KAAKIDPR-----DAQAFIDLG 417
           +  LG++Y +                + +KA  LL   + A  DP+     DA   ++L 
Sbjct: 453 MILLGNLYAEEVFANQFAPVKEDKSAEAKKAIGLLESVRTAWKDPKKSLAPDAAVLLNLA 512

Query: 418 ELLISSDTGAALDAFKTARTL------LKKAGEEV--------------PIEVLNNIGVI 457
            L  + +   AL   +    L        +  +EV              P ++LNNIG  
Sbjct: 513 RLYETENPDKALQCLQQVEQLELDQVPQSERPDEVEGEAAIKAALRRFLPPQLLNNIGCF 572

Query: 458 HFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNH 517
           ++++ + E A + F+ AL                    S+ M          R     + 
Sbjct: 573 YYQEEKHELASELFEAAL--------------------SSCM----------RIGETDDD 602

Query: 518 VELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQL 577
            +      T+ FNL R  E    +  A  +Y  +L ++ DY DA +RLA I K RNN   
Sbjct: 603 TDTDALVTTISFNLGRSYEARGMSEKAVEVYEGLLKRHDDYTDARIRLAYI-KLRNN--- 658

Query: 578 SIELVNEALKVNGKYPNALSML-----GDLELKN-DDWVKAKETFRA-----ASDAT--- 623
                        + P+A++ L      DLE++    W   K + R      A D     
Sbjct: 659 ---------PGTKEGPDAVAKLYQENSSDLEVRALYGWFLGKLSSRKRPNNIAEDPEQRH 709

Query: 624 --------DGKDSYATLSLGNWNYFAA--LRNEKRAPKLE-ATHLEKAKELYTRVIVQHT 672
                   D  D YA + +GN +  +A  +R E  A + + +    +A E + + +    
Sbjct: 710 YKHTLQNYDKHDRYALVGMGNLHLISAREMRRESEADRQKRSAAYSRAVEFFDKALQLDP 769

Query: 673 SNLYAANGAGVVLAE-KGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFA 731
            N YAA G  + L E K  +  +  +F +V+E       ++   V++NL H+Y     F 
Sbjct: 770 KNAYAAQGIAIALVEDKKDYKGALQIFIKVRET------IKDVHVFVNLGHIYAELKQFT 823

Query: 732 LAMKMYQNCLRKFYYNTDAQILLYLART---HYEAEQWQDCKKSLL----RAIHLAPSNY 784
            A++ Y+  L K     DA IL  L RT      AE+  D  K+ L    + + +AP   
Sbjct: 824 KAIESYEIALGKEGKAKDANILSCLGRTWLNKGRAERNLDAYKTALEYAQKTLEVAPEQV 883

Query: 785 TLRFDAGVAMQKFSA--STLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGFDE 842
             +F+      + ++  + L + +RT+ ++    + LE+A+     ++A+          
Sbjct: 884 HFKFNVAFVQIQLASFINGLPEHQRTSTQLEEAASGLESAITALDEIAASD--------- 934

Query: 843 KKINTHVEYCKHLLDA-AKIHREAAEREEQQNRQRQEAARQAALAEEARRKAEEQKKYLL 901
                H  Y KH ++  A + R         N QR++  R  A   +   K +E+ +  L
Sbjct: 935 -----HPPYPKHDIEQRANMAR---------NTQRKQLERALASQRDYESKNKEKLQLAL 980

Query: 902 EKRKL 906
           E+R++
Sbjct: 981 EQRQV 985


>gi|262302953|gb|ACY44069.1| SH2 domain binding protein [Peripatus sp. 'Pep']
          Length = 178

 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 79/178 (44%), Positives = 115/178 (64%)

Query: 147 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 206
           A + F  VL    +N+P+LLG+AC+ FN+  Y  +L FYK+AL+ +P CP A+RLG+G C
Sbjct: 1   ADAQFNFVLNQSSNNIPSLLGKACIAFNKKDYRGALAFYKKALRTNPDCPAAVRLGMGHC 60

Query: 207 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY 266
             KLG++ KAR AF+RALQLD + V ALV LA+++L   +   IR G++ + RA+ I   
Sbjct: 61  FVKLGKMDKARLAFERALQLDSQCVGALVGLAILELNNKQPDSIRNGVQMLSRAYTIDST 120

Query: 267 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 324
             M LN+LANHFFF   +  V+ L   A   T +   ++ S Y LAR++H + DY++A
Sbjct: 121 NPMVLNHLANHFFFKKDYSKVQHLALHAFHNTENEAMRAESCYQLARAFHVQNDYDQA 178


>gi|262302925|gb|ACY44055.1| SH2 domain binding protein [Idiogaryops pumilis]
          Length = 174

 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 80/174 (45%), Positives = 111/174 (63%)

Query: 151 FKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 210
           F  VL    +N+P+LLG+AC+ FN+  Y  +L FYK+AL+ +PSCP  +RLG+G C YKL
Sbjct: 1   FNFVLNQSSNNIPSLLGKACIAFNKKDYKGALTFYKKALRTNPSCPADVRLGMGHCFYKL 60

Query: 211 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 270
            +L KAR AF+RAL+LD + V ALV LAV+ +       IR G++ + +A+ I P   M 
Sbjct: 61  NRLEKARLAFERALELDSQCVGALVGLAVLSINEGSTDSIRSGVQMLSKAYSIDPTNPMV 120

Query: 271 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 324
           LN+LANHFFF   H  V  L   A   T +   ++ S Y LARS+H + DY++A
Sbjct: 121 LNHLANHFFFKRDHTKVHNLALHAFHKTENEAMRAESCYYLARSFHIQEDYDQA 174



 Score = 42.0 bits (97), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 33/138 (23%), Positives = 62/138 (44%), Gaps = 6/138 (4%)

Query: 335 INKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLK-ALGHIYVQLGQIE 393
           +N+    I    G   +     D++ ALT ++K L   P     ++  +GH + +L ++E
Sbjct: 5   LNQSSNNIPSLLGKACIAFNKKDYKGALTFYKKALRTNPSCPADVRLGMGHCFYKLNRLE 64

Query: 394 KAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIE--VL 451
           KA+    +A ++D +   A + L  L I+     + D+ ++   +L KA    P    VL
Sbjct: 65  KARLAFERALELDSQCVGALVGLAVLSINE---GSTDSIRSGVQMLSKAYSIDPTNPMVL 121

Query: 452 NNIGVIHFEKGEFESAHQ 469
           N++    F K +    H 
Sbjct: 122 NHLANHFFFKRDHTKVHN 139


>gi|295660519|ref|XP_002790816.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
 gi|226281369|gb|EEH36935.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
          Length = 1683

 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 247/1048 (23%), Positives = 431/1048 (41%), Gaps = 209/1048 (19%)

Query: 2    ACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQ 61
            + + IP    + EV ++L++LP D +++  +L  E+A  + W+IIA  Y KQ +++    
Sbjct: 464  SAIDIPASTFDSEVEISLEELPDDPTELCTLLDNEKAAKNFWVIIALAYAKQNQIDHAID 523

Query: 62   ILEEGSSPEIDEYYADVRYERIAILNALGVYYTYL----------GKIETKQREKEEHFI 111
            IL  G    +      +  E++ +L  +   Y             G++ ++ + K+ +  
Sbjct: 524  ILNRG----LSSLAQGMTKEKLGLLGWICWLYMLKARQAPRVALEGQLVSEAKTKDFYLQ 579

Query: 112  LATQYYNKASRIDMHEPSTWVGKGQLLLAKGE------------------VEQASSAFKI 153
             AT   N+ASR++   P  ++ +G L L +                    VE    A K 
Sbjct: 580  AATSILNEASRLNPAFPPLFLARGVLSLLRASLHPPARTIRPGTVDTSERVESLRQALKC 639

Query: 154  VLEADR----DNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGA-IRLGIGLCRY 208
              E+ +     NV A+LG+A   +  GRY+++LE Y+  L   P+      R+GIG C +
Sbjct: 640  FDESAKAFGNRNVMAILGRARAHYMLGRYAEALEGYQEVLMKMPNMRDPDPRIGIGCCLW 699

Query: 209  KLGQLGKARQAFQRALQLDPENVEALVALAVMDL------QANEAA--GIRK--GMEKMQ 258
            +L    +A+ A+ RAL L+PE+  A + L    L        N+ +   I K    +  Q
Sbjct: 700  QLDFKEQAKSAWTRALALNPESKAANILLGAYYLYDSSRHATNDPSFGSIYKLAMTQYTQ 759

Query: 259  RAFEI---YPY-CAMALNYLANHFFFTGQHF-LVEQLTETALAVTNHGPTKSHSYYNLAR 313
            +A+++   YP  CAM   Y     F   +HF  VE L   A+ +T+     S  +Y LAR
Sbjct: 760  KAYKLDKEYPITCAMFGGY-----FLLRKHFPTVEALARKAIELTDVNAIASDGWYLLAR 814

Query: 314  SYHSKGDYEKAGLYYMASVKEINKPHEFIFP-YYGLGQVQLKLGDFRSALTNFEKVLEIY 372
              H +G+  KA  YY  S +      +   P  +G  Q+Q++ GD+  A    EK+++  
Sbjct: 815  KEHFEGEASKANEYYSRSDQARGGSDKGYLPAKFGAVQMQVQTGDYDGAKFRLEKIIQ-Q 873

Query: 373  PDNCETLKALGHIYVQLGQIEKAQEL-------LRKA---------------AKIDPRDA 410
              N E++  LG +  +     +A  L       LRKA                ++ P D 
Sbjct: 874  TKNPESMTLLGALLAEEVFAAEASPLKEDKSAELRKAISLLESVRASWKDEKKRLSP-DE 932

Query: 411  QAFIDLGEL-----------------------LISSDTGAALDAFKTARTLLKKAGEEVP 447
               + L  L                       +  +D    +D  +T   LL+   E + 
Sbjct: 933  SVLLYLARLYENSAPDKSMQCLQQVEQMQLGQIPDTDRPEDIDDEETMTNLLR---ENLS 989

Query: 448  IEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQL 507
             ++LNN+G   +   + E A   F+ AL        + S+ K    D  A +        
Sbjct: 990  PQLLNNMGCFLYHAEKVEQARHMFQTALN-----ACVKSREKDDTTDTDALV-------- 1036

Query: 508  FHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAA 567
                              T+ +NLAR  E       A  +Y  +L ++ DY +A  RL  
Sbjct: 1037 -----------------TTISYNLARTYEAASMPDEAKKVYEGLLERHSDYTEANARLTY 1079

Query: 568  IAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDD------WVKAKETFRAASD 621
            IA       L     +E        P  ++ L +LE  N +      W  +K   R  + 
Sbjct: 1080 IA-------LRQSPTDEG-------PKKMAKLYELESTNLEVRALFGWYLSKSKKRVTNI 1125

Query: 622  ATDGK--------------DSYATLSLGNWNYFAALRNEKRAPKLEATH----LEKAKEL 663
            A D +              D Y+   +GN  Y  A R+ +R  + +        EKA E 
Sbjct: 1126 AEDHEQRHYKHTLQGYDKHDRYSLTGMGNI-YLLAARDMRRDTEQDKEKRRKMYEKAVEF 1184

Query: 664  YTRVIVQHTSNLYAANGAGVVLA-EKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAH 722
            + + +     N YAA G  + L  ++  +  +  +FT+V++       ++   V++NL H
Sbjct: 1185 FDKALQLDPKNAYAAQGIAIALVDDRKDYTTAVQIFTRVRDT------LRDASVYLNLGH 1238

Query: 723  VYFAQGNFALAMKMYQNCLRKFYYNTDAQIL-----LYLARTHYEAE-----QWQDCKKS 772
            VY     F  +++ Y+  L K     D QIL     ++L R  +E          DC + 
Sbjct: 1239 VYAELRQFTRSIENYEAALSK-DRQRDTQILACLGRVWLLRGMHEKSLAAMNTALDCTQ- 1296

Query: 773  LLRAIHLAPSNYTLRFDAGVAMQKFS--ASTLQKTRRTADEVRSTVAELENAVRVFSHLS 830
              RA  +AP    L F+      + +    +L +T++T  +V++    L+ A+  F+ +S
Sbjct: 1297 --RARAIAPEQIHLEFNVAFVQNQIALLVISLPETQKTLQDVQAASKGLDEAINTFTQIS 1354

Query: 831  AASN-LHLHGFDEKKI----NTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEAARQAAL 885
             A    +  G  E++     NT     +  L + K + E    + QQ R+ +EA  +   
Sbjct: 1355 KAKKPPYPRGALEQRANMGRNTMRRKLERTLQSQKEYEEKNATKLQQAREAREAELKRRE 1414

Query: 886  AEEARRKAEEQKKYLLEKRKLEDEQKRL 913
             E+ + +  E+K+    KR++ ++++RL
Sbjct: 1415 EEKRKAEEVERKR----KRQIAEDRQRL 1438


>gi|397645623|gb|EJK76918.1| hypothetical protein THAOC_01291 [Thalassiosira oceanica]
          Length = 1342

 Score =  163 bits (413), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 243/1040 (23%), Positives = 419/1040 (40%), Gaps = 234/1040 (22%)

Query: 4    VYIPVQNSEEEVRVALDQLPRDASDIL-----DILKAEQAPLDLWLIIAREYFKQGKVEQ 58
            + IPV +S  +V + +   P + S+I      ++L+ E APL  W   +  Y K  + ++
Sbjct: 88   LVIPVTSSSNDVFIEI--FPEEMSNIRPATLSNVLRDEGAPLKTWCEASLLYMKGKREKE 145

Query: 59   FRQILEE--------GSSPEIDEYYADV-----------RYERIAILN--ALGVYYTYL- 96
              ++L          G S   D     V           R+E I+  +   +G     L 
Sbjct: 146  GCELLTSAVDNDDVMGGSNNADRLRLLVSSGIAALAQANRHEPISATDNDEMGSLLDSLM 205

Query: 97   --GKIETKQRE--KEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAF- 151
               K E +Q    +EE   +A   + KA  I+   P TW+ KG L LA+ + +QA   F 
Sbjct: 206  AASKAEEEQARVRREELQGIADARFVKADSINQVNPQTWIAKGMLNLAQKKFDQAKFFFD 265

Query: 152  KIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGA-IRLGIGLCRYKL 210
             + +  + + +PAL+G A V++    Y  + + Y +A++  P   GA +R+G G+  Y+L
Sbjct: 266  NLTMRQEGEILPALIGMAAVKYLEKDYKGAQDLYAKAMEKFPVQSGAAVRVGFGVACYRL 325

Query: 211  GQLGKARQAFQRALQLDPENVEALVALAVMD--------LQANE-AAGIRKGMEKMQRAF 261
             ++ +A+ AF+RA  +DP+NVEAL+ LA+++        L ANE  A     ++ + +A 
Sbjct: 326  NEIDRAKAAFRRAHDMDPDNVEALMGLAILEMASLDSHALDANEYRAKAGSVIQMISQAN 385

Query: 262  EIYPYCAMALNYLANHFFF----------------------------TGQHFLVEQLTET 293
             +    A   N+LANH+F+                             G    + +  ET
Sbjct: 386  LVDHTNASVQNHLANHYFWKWSPVPGMVSVECGSNIVTGSNVASSLEAGDRIRIGKELET 445

Query: 294  ALAVTNHGPTKSHSYYNLARSYH---------SKGDYEKAGLYYMASVKEINKPHEFIFP 344
             +AV +         + +  ++           K DYE+      A+    N P      
Sbjct: 446  LVAVDDEDEMADGETFKIKDTWKFDSKSNLKIWKKDYERVISLAKAAYSSTNIPGIQAES 505

Query: 345  YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCET-----------LKALGHIYVQLGQIE 393
             Y L +V    G+   A  +  + +    D  E            L A+G +  + G+  
Sbjct: 506  LYMLARVFHARGEMTEAHIDLGRQIRRRRDFAEVVIRYLHNRNGRLAAMGLLDAKAGKRA 565

Query: 394  KAQELLRKAAKIDPRDAQAFIDLGELLI----SSDTGAALDAFKTARTLLKKAGEEVPIE 449
             A   LRKA  +DP +A     L E L      +D  A+LD ++ A  LL+  G  +  +
Sbjct: 566  DAFTSLRKAIDLDPFNADLV--LIEALALQQHETDYPASLDRYRNAVRLLEAQGRSISAD 623

Query: 450  VLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFH 509
            VL N+GV+  E  ++E A + +  AL D I     +S  K       ++ ++ ++  LF 
Sbjct: 624  VLTNMGVLCHETKQYEEALEMYTKAL-DAIESENPESVGKPDET-CDSTFVRHEENSLFW 681

Query: 510  RFENDGNHVELPWNKVTVLFNLARLLEQIHD---------TVAASVLYRLI--------- 551
            +++  G  V++      +L   + L+E+  D         ++   V   +          
Sbjct: 682  KYQEIGIRVKIDDKDKKLLIAPSDLVEECADLLIKVGDDISLGEGVFSTVTDVTEGDDEA 741

Query: 552  ----------LFKYQDYVDAYLR----------------LAAIAKARNNLQLSIELVNEA 585
                      L  +Q YV +  R                LA + +    +  ++EL    
Sbjct: 742  LHIKVKDDVELKSHQTYVVSVKRSNGRIQNPSVVSIAFNLARLHETSGRIVPAVELHKAI 801

Query: 586  LKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYAT------LSLGNW-- 637
            LK +  Y N+   L  +           E  + A     G     T      LSL +W  
Sbjct: 802  LKQHPSYVNSYLRLACIARDCGSLKDCSEWLKNAVAVAPGNPEVLTLVGNLHLSLCDWAP 861

Query: 638  --NYFAALRNEKRAPKLEA---------------------THLEKAKELYTRVIVQHTSN 674
                F  L  +K  PK+EA                      HL  A + Y R++ + T+N
Sbjct: 862  AQKVFDQLLQQK-VPKVEAYSMLSLGNIYFNNLNTPKKYNKHLHHAADFYRRILQKDTAN 920

Query: 675  LYAANGAGVVLAEKGQ---------FDVS--------------KDLFTQVQEAASGSVFV 711
             YAANG G VLAEKG+          D S              K++F +V+E +  +   
Sbjct: 921  AYAANGLGTVLAEKGELLKVISTFLLDRSFQLWRPANFLHVKAKEIFNRVREVSGDT--- 977

Query: 712  QMPDVWINLAHVYFAQGNFALAMKMYQN----CLR-------KFYYNTDAQILLYLARTH 760
             + D  +NL H+Y AQ     A++MYQN    C R       K   + +A++LLY+A  +
Sbjct: 978  -LSDALLNLGHIYLAQKKHPEALQMYQNYMGRCRRSGAQTTSKSQEDDEAEVLLYIAFAY 1036

Query: 761  YE----------------AEQWQDCKKSLLRAIHLAP-SNYTLRFDAGVAMQKFSASTLQ 803
            ++                 E+++ C + + +A+  +   N  LR++  ++  + +   L+
Sbjct: 1037 FDWARQTELFNNAKAAPADERYRMCIEYIEKAMEKSKRENVVLRYNWCLSKLQAANCVLR 1096

Query: 804  KTRRTADEVRSTVAELENAV 823
            K  R    +R T AE+ +A+
Sbjct: 1097 KVDRN---IRRTAAEVSDAL 1113


>gi|262302915|gb|ACY44050.1| SH2 domain binding protein [Ephemerella inconstans]
          Length = 178

 Score =  163 bits (413), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 79/178 (44%), Positives = 114/178 (64%)

Query: 147 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 206
           A + F  VL   ++N+P+LLG+AC+ FN+  Y  +L FYK+AL+ +P+CP  +RLG+G C
Sbjct: 1   ADAQFNFVLNQSQNNIPSLLGKACIAFNKKDYRGALAFYKKALRTNPNCPAGVRLGMGHC 60

Query: 207 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY 266
             KLG   +AR AF+RALQLD   V ALV LAV+ L    A  IR G++ + +A+ I P 
Sbjct: 61  FMKLGNQDRARLAFERALQLDASCVGALVGLAVLQLNEQTADAIRTGVQMLSKAYTIDPT 120

Query: 267 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 324
             M LN+LANHFFF   +  V+ L   A   T +   ++ S + LARS+H +GDY+++
Sbjct: 121 NPMVLNHLANHFFFKKDYSKVQHLALHAFHNTENEAMRAESCFQLARSFHVQGDYDQS 178



 Score = 43.1 bits (100), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 33/134 (24%), Positives = 61/134 (45%), Gaps = 6/134 (4%)

Query: 335 INKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLK-ALGHIYVQLGQIE 393
           +N+    I    G   +     D+R AL  ++K L   P+    ++  +GH +++LG  +
Sbjct: 9   LNQSQNNIPSLLGKACIAFNKKDYRGALAFYKKALRTNPNCPAGVRLGMGHCFMKLGNQD 68

Query: 394 KAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIE--VL 451
           +A+    +A ++D     A + L  L ++  T    DA +T   +L KA    P    VL
Sbjct: 69  RARLAFERALQLDASCVGALVGLAVLQLNEQTA---DAIRTGVQMLSKAYTIDPTNPMVL 125

Query: 452 NNIGVIHFEKGEFE 465
           N++    F K ++ 
Sbjct: 126 NHLANHFFFKKDYS 139


>gi|449301021|gb|EMC97032.1| hypothetical protein BAUCODRAFT_68395 [Baudoinia compniacensis UAMH
            10762]
          Length = 1197

 Score =  163 bits (412), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 247/1050 (23%), Positives = 438/1050 (41%), Gaps = 183/1050 (17%)

Query: 2    ACVYIPV--QNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQF 59
            A + IPV  ++ EE V + L  L  +  ++ D+L+ E A  + W+ IA  Y KQ KV   
Sbjct: 30   AVIDIPVRGEDGEEAVNLDLVDLIDETDELCDLLENENAARNYWITIALAYAKQKKVAIA 89

Query: 60   RQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQ--------REKEEHFI 111
              IL++G    +    A    +R+++L+ L   Y ++ +   ++          K+    
Sbjct: 90   IDILQKG----LGALRAGRGEDRLSMLSCLCWLYLWMCRRAVRKPMQSADDVPNKDYWLK 145

Query: 112  LATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVE----------QASSAFKIVLE-ADRD 160
            L TQ  N ASRI+      ++ +G L L +  ++          QA+ +F      + + 
Sbjct: 146  LGTQTLNDASRINPSYAPLYLARGTLYLLRASMQTPKERADTLKQAAKSFDEAYRLSGQK 205

Query: 161  NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSC--PGAIRLGIGLCRYKLGQLGKARQ 218
            N+ A+LG+A V+F+ GR+++SL  Y++ALQ  P    P   R+GIG C ++L     AR 
Sbjct: 206  NIMAVLGKARVQFSLGRFAESLALYQQALQSAPDMLDPDP-RIGIGCCLWQLEHKDAARG 264

Query: 219  AFQRALQLDP-ENVEA--LVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLA 275
            A+QR+L L P EN+ A  L+ L+ +D  +  A+   +      +A  ++   A  ++  A
Sbjct: 265  AWQRSLDLKPDENIIANVLLGLSYLDESSQYASSDSQFRSLYSKAMTVHTQAAFKMD--A 322

Query: 276  NHFFFT---GQHFL-------VEQLTETALAVTNHGPTKSHSYYNLARSYHSKG-DYEKA 324
             H   +   G++FL       VE+L   A+  T+ G   S  +Y +AR  H  G D  KA
Sbjct: 323  MHALTSATLGEYFLRRQNWDNVERLGRRAVEQTDVGAIASDGWYLMARKEHYLGTDLTKA 382

Query: 325  GLYY-MASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIY-------PDNC 376
              +Y  A V        F+   +G  Q++  +GD   A    +K++            + 
Sbjct: 383  AEHYNKADVARGGDEKGFLPAKFGGAQLKTLMGDLDGAKFRLDKIISGSNAATGGGQKSV 442

Query: 377  ETLKALGHIYVQ---------------------LGQIEKAQELLRKAAKIDPRDAQAFID 415
            E +  LG +Y +                     +G +E+ + + +   +    DA   ++
Sbjct: 443  EAMTLLGMLYAEEVFANQAAAGKEDKTVEQKKAIGLLEQVRVIWKDPKRKGSPDAAVLLN 502

Query: 416  LGELLISSDTGAALDAFKTARTL----LKKAGEEVPIEV------------------LNN 453
            L  L        AL   +    +    +    E +P E+                  LNN
Sbjct: 503  LARLYEQEQPEKALACLQHVEQMELDDIADDDERLPDEIGEATEERRAKRELLSPQLLNN 562

Query: 454  IGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFEN 513
            IG  HF+   F  A + F+ AL   + +   D+   T   DA  S               
Sbjct: 563  IGCFHFQADRFTEAREDFQTALNSCVKMGERDASLDT---DALVS--------------- 604

Query: 514  DGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLA--AIAKA 571
                        T+ +NLAR  E       A  +Y  +L ++ +Y DA  RLA  +++ A
Sbjct: 605  ------------TISYNLARTYEAEGMNEEARRIYDGLLERHPNYTDANARLAYLSLSAA 652

Query: 572  RNNLQLSIELVNEALKVN-------GKY-----PNALSMLGDLELKNDDWVKAKETFRAA 619
              +   +I+ + E+   N       G Y         ++  D+E K+      K+T +  
Sbjct: 653  PADGAEAIKQLMESDPSNLESRALYGWYLHRSKKRTHNLPEDVEQKH-----YKDTLQ-- 705

Query: 620  SDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEK----AKELYTRVIVQHTSNL 675
                D  D Y+ + +GN  + A  R  +R    +     K    A E + +V+     N 
Sbjct: 706  --KFDKHDMYSLVGMGNL-HLAVAREMRRETDQDKDRRSKTYMRAVEFFDKVLTLDPRNA 762

Query: 676  YAANGAGVVLAE-KGQFDVSKDLFTQVQEA---ASGSVFVQMPDVWINLAHVYFAQGNFA 731
            +AA G G+ +AE K   + +  +F++V+E+    SGSV        +NL HV+     ++
Sbjct: 763  FAAQGLGIAMAEDKKDTNAAIQIFSKVRESLKGLSGSVH-------LNLGHVFAEMRQWS 815

Query: 732  LAMKMYQNCLRKFYY-----NTDAQILLYLART-------HYEAEQWQDCKKSLLRAIHL 779
             +++ Y+  L +          D QIL  L R          + E +Q       +A+ L
Sbjct: 816  RSIENYELALSRSAKERADGKPDPQILACLGRVWLMRGRQEKKLEAYQTSLDLSKQALEL 875

Query: 780  APSNYTLRFDAGVAMQKFSA--STLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHL 837
            AP N + RF+      + +     L + +++  +V      L++A+  F  ++ + N   
Sbjct: 876  APENVSFRFNVAFVQIQLTQLLIGLPEAQKSLQDVEQAGHGLDDAINAFIEIAKSPNPPF 935

Query: 838  HGFD-EKKINTHVEYCKHLLDAAKIHREAAERE--EQQNRQRQEAARQAALAEEARRKAE 894
               D E + N      K  L  A   +   ER+   +    R+    +    E+ +RKAE
Sbjct: 936  PRGDLEARANMGRNTMKRQLAGAMEKQAEYERKNASRLEEARRRREEEIKKREDDKRKAE 995

Query: 895  EQKKYLLEKRKLEDEQKRLRQQEEHFQRVK 924
            E  +   ++RK+++E+ R+ +++    R K
Sbjct: 996  EAAEE--QRRKVKEERDRMAEEDREMVRRK 1023


>gi|347835077|emb|CCD49649.1| similar to RNA polymerase II transcription elongation factor (Ctr9)
           [Botryotinia fuckeliana]
          Length = 1234

 Score =  162 bits (411), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 223/960 (23%), Positives = 391/960 (40%), Gaps = 188/960 (19%)

Query: 2   ACVYIPV--QNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQF 59
           + + IPV  ++ ++ V + L+ L  D +++  +L+ E A    W+ +A  Y KQ KV+  
Sbjct: 35  SAIDIPVTGEDDDQAVEIDLEDLLDDPTELCTLLENEGAARTYWMTVALAYAKQKKVDHA 94

Query: 60  RQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQRE-----------KEE 108
            ++L +G S            ER+++L  L   Y +  K   + R            KE+
Sbjct: 95  IEMLTKGQSA-----MRGGNKERLSMLTCLCWMYLWKSKEAPRHRPDSVEHGEEIKTKED 149

Query: 109 HFILATQYYNKASRIDMHEPSTWVGKGQLLL-------------AKGEVEQ--------A 147
              +AT   N ASRI+   P  ++ +G L L             A G ++         A
Sbjct: 150 WLKMATSNLNDASRINPSFPPLFLARGVLQLLRASTRPFPRNNTAPGALDPEKAELLRGA 209

Query: 148 SSAFKIVLEADRD-NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS-CPGAIRLGIGL 205
             +F+  ++A    N+ A+LG+A   ++ G+Y+++LE Y+ AL+  P       R+GIG 
Sbjct: 210 QKSFEDAIKASHGRNMLAVLGKARAAYSMGKYAEALEGYQEALRSMPDLVDPDPRIGIGC 269

Query: 206 CRYKLGQLGKARQAFQRALQLDPENVEALVALA--VMDLQANEAAG-------IRKGM-E 255
           C ++LG    A+ A++R+L+++P++  A + LA   +D  A+            +K M E
Sbjct: 270 CFWQLGFKEDAKAAWERSLEINPDSKVANILLAQFYLDQSAHVPTNSPEFIQLYKKAMTE 329

Query: 256 KMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSY 315
             QR+++      +     A +F        VE L + A+  T+     S  +Y LAR  
Sbjct: 330 YTQRSYKADKDMPLTCATFAGYFLSRKSMPNVEALAQKAIQYTDVNAIASDGWYLLARKE 389

Query: 316 HSKGDYEKAGLYY-MASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPD 374
           H   +YEKA  YY  A          ++   +G  Q+ +  GDF  A    EK+++    
Sbjct: 390 HFDDNYEKALDYYGRADDARGGADRGYMPAKFGAAQLSVLKGDFGEAKLRLEKIIQ-QSK 448

Query: 375 NCETLKALGHIYVQLGQIEKAQELLRKAAKI------------------DPR-----DAQ 411
           N E +  LG +Y +  ++  +QE   K  K                   DP+     DA 
Sbjct: 449 NIEAMILLGTLYAE--EVFSSQESGVKEDKTTEYKKAVGYLENVRTAWKDPKKNLVPDAS 506

Query: 412 AFIDLGELLISSDTGAALDAFKTARTL----------LKKAGEEV----------PIEVL 451
             ++L  L  +     +L   +    +           ++ G+EV            ++L
Sbjct: 507 VLLNLARLYETEQPEKSLQCLQQVEQIEFDQIPAADKPEETGDEVAYKNTMRENLSPQLL 566

Query: 452 NNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRF 511
           NNIG  +++  +++ A + F+ AL        + +  K   +D  A +            
Sbjct: 567 NNIGCFYYQSEKYDLAREMFQAALN-----ACVKAGEKLEGMDTDALV------------ 609

Query: 512 ENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKA 571
                         T+ FNL R  E       A  +Y  +L ++ DY DA  RLA IA  
Sbjct: 610 -------------TTISFNLGRTYEASGMPDEAKTVYEGLLGRHSDYTDAKTRLAYIALR 656

Query: 572 RNNLQLSIELVNEALKVNGKYPNALSML-----GDLELKN-DDWVKAKETFRAASDAT-- 623
           R+  +              + P A+S L      DLE++    W   +   R  S     
Sbjct: 657 RDRTE--------------EGPKAVSALYKESSADLEVRALYGWYLGRMHSRKRSSNVNE 702

Query: 624 --------------DGKDSYATLSLGNWNYFAA---LRNEKRAPKLEATHLEKAKELYTR 666
                         D  D YA + +GN N  AA    R+ +   +  +    KA E + +
Sbjct: 703 DPEYRHYKHTLQQYDKHDRYALIGMGNLNLMAAREMRRDSESDKQARSKTYTKAVEFFDK 762

Query: 667 VIVQHTSNLYAANGAGVVLAE-KGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYF 725
            +     + YAA G  + L E K     +  +F +V++       V+ P V++NL H++ 
Sbjct: 763 ALQLDPKSAYAAQGIAIALVEDKKDSKTALPIFLKVRDT------VKDPSVFVNLGHIFA 816

Query: 726 AQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSL-------LRAIH 778
               ++ A++ Y+  L K   + D+ IL  L RT     +      S        L+A+ 
Sbjct: 817 ESRQYSKAIEHYEAALTKDRAH-DSHILTCLGRTWLSKGKGDKSLSSFKSALDYSLKALE 875

Query: 779 LAPSNYTLRFDAGVAMQKFSAST----LQKTRRTADEVRSTVAELENAVRVFSHLSAASN 834
           ++P     +F+  VA  +   +T    L +T+R+ +EV+     LE A+     ++   N
Sbjct: 876 ISPEQVHYKFN--VAFVQLQLATMIYNLPETQRSLEEVQGAAKGLEEAIEALDAIAKHPN 933


>gi|262302967|gb|ACY44076.1| SH2 domain binding protein [Scutigerella sp. 'Scu3']
          Length = 178

 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 79/178 (44%), Positives = 114/178 (64%)

Query: 147 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 206
           A + F  VL    +N+P+LLG+AC+ FN+  Y  +L FYK+A++ +P CP A+RLG+G C
Sbjct: 1   ADAQFNFVLNQSPNNIPSLLGKACIAFNKKDYRGALAFYKKAIRTNPKCPAAVRLGMGHC 60

Query: 207 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY 266
             KLG+  KA+ AF+RALQLD + V ALV LAV+ L      GI+ G++K+ +A+ I   
Sbjct: 61  FLKLGKQDKAKLAFERALQLDAQCVGALVGLAVLALNNKTPEGIKDGVQKLSKAYSIDST 120

Query: 267 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 324
             M LN+LANHFFF   +  V+ L   A   T +   ++ S Y LAR +H +GDY++A
Sbjct: 121 NPMVLNHLANHFFFKKDYQKVQHLARHAFHNTENEAMRAESCYQLARDFHVQGDYDQA 178


>gi|320587753|gb|EFX00228.1| RNA polymerase 2 transcription elongation factor [Grosmannia
            clavigera kw1407]
          Length = 2074

 Score =  162 bits (410), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 246/1045 (23%), Positives = 442/1045 (42%), Gaps = 193/1045 (18%)

Query: 2    ACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQ 61
            A + +P Q+ +E V + L+ L  D +D+ D+ + E A    W+ ++  Y KQGK+E   +
Sbjct: 36   ATIDVPTQDEDEAVEIGLENLVDDPTDLCDLFENENAARTYWMTVSLAYAKQGKIENAIE 95

Query: 62   ILEEGSSPEIDEYYADVRYERIAILNALGVYYTYL----------GKIETKQREKEEHFI 111
            +L  G     +    +   E+++I+  L   Y +           G + ++ R KE +  
Sbjct: 96   MLVRGG----NAMQNNNPKEKLSIVACLCWMYLWKSRLAPRVAPEGSLVSEARTKEYYLQ 151

Query: 112  LATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASS-----------------AFKIV 154
            LAT   N+ASRI+   P  ++ +G LLL +  ++Q SS                 A K  
Sbjct: 152  LATSSLNEASRINPAYPPLFLARGVLLLLRASLQQPSSSAAGGQVDGEKAELLRAAMKSF 211

Query: 155  LEADR----DNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSC--PGAIRLGIGLCRY 208
             +A R     N+ AL+G++   ++ G+Y+ +L  Y+  LQ  P+   P   R+GIG C +
Sbjct: 212  DDALRVSQGRNMLALMGKSRALYSIGKYAQALSGYQEVLQKAPTLVDPDP-RIGIGCCFW 270

Query: 209  KLGQLGKARQAFQRALQLDPENVEALVALAV------MDLQANEAAGIR---KGM-EKMQ 258
            +LG    A+ A++R L+++ ++  A + L +        + +N    IR   K M E  Q
Sbjct: 271  QLGFKEDAKAAWERCLEINADSKVADILLGLYYLNSSAQVPSNSPDFIRLYKKAMTENTQ 330

Query: 259  RAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSK 318
            +AF++     +A +  A +F        VE L + A+  T+     S  +Y LAR  H  
Sbjct: 331  KAFKLDKNMPLACSTFAGYFLSRKSLANVESLAQKAIQNTDVNAIASDGWYLLARKAHLD 390

Query: 319  GDYEKAGLYYMASVKEINKPHEFIFPY-YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCE 377
            GD  +A  YY  S +          P  +G+ Q+ +   D   A    EK+++    + E
Sbjct: 391  GDLGRAADYYRRSDEARGGTERGYLPAKFGVAQLSVVKNDLGEAKLRLEKMIQ-QSKSLE 449

Query: 378  TLKALGHIYVQ---------------------LGQIEKAQELLRKAAKIDPRDAQAFIDL 416
             +  LG +Y +                     +  +E  +   + A K    D+   ++L
Sbjct: 450  AMALLGTLYAEEVFASERSSVKEDKAAEKKKAIALLESVRGAWKDAKKNLSPDSAVLLNL 509

Query: 417  GELLISSDTGAALDAFK-----------------------TARTLLKKAGEEVPIEVLNN 453
            G L        AL   +                       T R  L+K    +P ++LNN
Sbjct: 510  GRLYEGDQPDRALQCLQQVEQIELDQIVESEKAPEGTDEATHRESLRKL---LPPQLLNN 566

Query: 454  IGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFEN 513
            +G  +++  + E A Q+F+ AL   +       K+++   D                 E 
Sbjct: 567  VGCFYYQADKHEQASQTFELALDACV-------KSQSKGDD-----------------ET 602

Query: 514  DGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLA------- 566
            D + +       T+ +NL R  E       A  +Y  +L ++  Y +A LRLA       
Sbjct: 603  DADAL-----VTTISYNLGRSYEVQGVLDKAVEVYEGLLKRHGGYTEARLRLAYMQLRQH 657

Query: 567  -------AIAKARNNLQLSIELVNEAL------KVNGKYPNALSMLGDLELKNDDWVKAK 613
                   A+AK   +    +E+   AL      KV+ K   A ++  DLEL++       
Sbjct: 658  PNDGGPDAVAKLYQDNPSDLEV--RALYGWYLGKVHAKKRPA-NIAEDLELRH------- 707

Query: 614  ETFRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLE----ATHLEKAKELYTRVIV 669
              ++      D  D YA + +GN  Y  + R  +R  + E    +    +A E + + + 
Sbjct: 708  --YKHTLQNYDKHDRYALVGMGNL-YLLSAREMRRETEQERQKRSATYSRAVEFFEKALQ 764

Query: 670  QHTSNLYAANGAGVVLAE-KGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQG 728
                N YAA G  + L E +  +  +  +F  V++   G+      +V++NL H+Y    
Sbjct: 765  LDPKNGYAAQGIAIALVEDRKDYRNALPIFLSVRDTVRGA------NVYVNLGHIYAELR 818

Query: 729  NFALAMKMYQNCLRK----FYYNTDAQILLYLARTHY---EAEQWQDCKKSLL----RAI 777
             F+ A++ Y+  L K         D  IL  L RT +   + E+  D  K  L    +A+
Sbjct: 819  QFSKAIENYEVALTKEGKGKGAGADTTILSCLGRTWFNKAKVEKDLDAYKEGLECAKKAL 878

Query: 778  HLAPSNYTLRFDAGVAMQKFSAST--LQKTRRTADEVRSTVAELENAVRVFSHLSAASNL 835
              AP     +F+      + +++   L +++RT  +++   + LE A++    ++A    
Sbjct: 879  EAAPEQVHFKFNVAFVQIQLASTIYGLSESQRTLQQLQEAASGLEEAIKALDEIAAHPQT 938

Query: 836  HLHGFD-EKKINTHVEYCKHLLDAAKIHREAAERE-EQQNRQRQEAARQAALAEEARRKA 893
                 D E++ N      +  L+ A     A++R+ E++N+++  AA +   AE  RR+ 
Sbjct: 939  PYPKQDVEQRANMARNTQRRQLERAI----ASQRDYEEKNKEKLAAALEQRQAELRRREE 994

Query: 894  EEQKKYLLEKRKLEDEQKRLRQQEE 918
            E QK   LE+ + E    ++R++ E
Sbjct: 995  ERQKVVALEQERKE----KIRKERE 1015


>gi|444323119|ref|XP_004182200.1| hypothetical protein TBLA_0I00160 [Tetrapisispora blattae CBS 6284]
 gi|387515247|emb|CCH62681.1| hypothetical protein TBLA_0I00160 [Tetrapisispora blattae CBS 6284]
          Length = 1095

 Score =  162 bits (410), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 226/979 (23%), Positives = 409/979 (41%), Gaps = 156/979 (15%)

Query: 2   ACVYIPVQNSEEEVRVALD-QLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFR 60
           A + IP++ SEE V + L+  LP + SD+  +L  E +  + WL IA  Y  QGK     
Sbjct: 16  ASLDIPLKASEEVVSIDLETDLPDNPSDLKTLLVEEGSAKEHWLTIAAAYCNQGK----- 70

Query: 61  QILEEGSSPEIDEYYADV--RYERIAILNALGVYYTYLGKIE-TKQREKEEHFILATQYY 117
             L EG   ++ +   DV    E+  I   L   +  L K E T  + K+E    A +Y 
Sbjct: 71  --LSEG--IKLAQLALDVFEHEEKATIYTFLTWAHLNLAKQESTTYKMKDEVLSKAEEYL 126

Query: 118 NKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEA-----------DRDNVPALL 166
             A  +D    S  +    L   +G  ++A     + ++             + N   +L
Sbjct: 127 KHAITLDPTWVSNMLATVDLYYERGHYDKALETVDLFIKGIHADDQRNGRVSKPNSMFVL 186

Query: 167 GQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQL 226
            +A + + + +Y+ SL+ ++  L ++PS     R+GIGLC ++L     A+ +++R ++L
Sbjct: 187 LRAKLLYQKKQYAPSLKLFQELLVINPSLQPDPRIGIGLCFWQLKDHKMAKTSWERCVEL 246

Query: 227 DPENVEALVALAVMDLQ------ANEAAGIRKGMEKMQRAFEIYPYC---AMALNYLANH 277
           DP+N  A + + + DL        N+   ++K  + ++    +Y       + L  L ++
Sbjct: 247 DPKNTTASILVLLSDLHDSLTSSKNDDDFVKKYTDVLKDLNNLYSSSKPNPVLLTVLQSY 306

Query: 278 FFFTGQHFLVEQLTETALAVTNHGPTK---SHSYYNLARSYHSKGDYEKAGLYYMASVKE 334
           F+  G +  V  +    +A  +   T    S S +   R+++S GDY  A   +  S+K 
Sbjct: 307 FYLKGDYQKVLDIYNDRIAPMDFLTTPTVLSDSTFWCGRAFYSIGDYRNAFTMFQTSLK- 365

Query: 335 INKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLE--------------IYPDNCETLK 380
                + +   +G+ Q Q+K      ++ +FE + +              +Y   C   K
Sbjct: 366 --YNEDNLLSKFGISQTQIKNNLLEESILSFENIYKTHEGVQELNYILGMLYSGKCLDPK 423

Query: 381 ALGHIYVQL--GQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTL 438
              HI       Q  KA   L K  K+        +     LI S      + +K +   
Sbjct: 424 LSKHISTNELNKQTNKAISFLEKYIKLTLSTKNRMVIPRAYLIISQLYETQNQYKLSMEY 483

Query: 439 LKKAGEE-------VPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTY 491
           L K  E+       +P+E+LNNIG  HF  G++E A+  F+ A  +              
Sbjct: 484 LLKVMEQIELANGHIPLEILNNIGCFHFINGDYEKANDYFQKANDNC------------- 530

Query: 492 VIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLI 551
                                +D ++      ++T+ +N+AR  E  HDT  AS LY  I
Sbjct: 531 ---------------------DDDSY------QITIDYNIARTTEN-HDTNKASELYENI 562

Query: 552 LFKYQDYVDAYLR--LAAIAKAR-NNLQLSIELVNEALKVN---------------GKYP 593
           L     Y+ A +R      A ++ +N+++    VNE ++ N                K  
Sbjct: 563 LNIEPSYLQARMRNLYCKFAYSKVDNMEVIDSQVNELMESNKSELEMRSFFSWYIKNKIN 622

Query: 594 NALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLE 653
           NA   L + E K  + V+     R      D  D+Y+ +SLGN  Y+    N K  P+  
Sbjct: 623 NA--NLDEKEYKQLEDVETNHN-RETLTKYDSHDAYSLISLGNL-YWTLGVNNKANPEKS 678

Query: 654 ATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQM 713
                K  +L+ +V+     N++AA G  ++ A+  +   + ++  +V+++         
Sbjct: 679 KQSFLKGIQLFQKVLQVDPLNIFAAQGLAIIFAQSKRLGPALEILRKVRDSLDNE----- 733

Query: 714 PDVWINLAHVYFAQGNFALAMKMYQNCLRKF-YYNTDAQILLYLARTHYE---------- 762
            DV INL H      +FA A++ Y+  L+++     ++ I   L    Y           
Sbjct: 734 -DVHINLGHCLLEMNDFAKAIESYEYVLKRYESVRNNSSIYNILGHAWYLRGNKEKKLMF 792

Query: 763 -AEQWQDCKKSLLRAIHLAPSNYTLR----FDAGVAMQKFS-ASTLQKTR---RTADEVR 813
             +  Q+ KK+L   I    S  +L+    F   +A+ +F  A TL+K+    RT+++++
Sbjct: 793 FQKALQNSKKAL--KIENNSSTKSLKKINTFKFNIALLEFQIAETLRKSTPLFRTSEDIK 850

Query: 814 STVAELENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQN 873
           +++  LE A+++   L   S+      +E  I   ++     + +A + R   E+EE +N
Sbjct: 851 NSLQGLEEALKMLVELKDNSSFKFASKEE--IEQRIQLGNTTMKSA-LERCLKEQEEYEN 907

Query: 874 RQRQEAARQAALAEEARRK 892
            Q  +      + EE  +K
Sbjct: 908 EQSIKIENAKKIQEENLQK 926


>gi|262302903|gb|ACY44044.1| SH2 domain binding protein [Cryptocellus centralis]
          Length = 178

 Score =  162 bits (410), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 79/178 (44%), Positives = 115/178 (64%)

Query: 147 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 206
           A + F  VL    +N+P+LLG+AC+ FN+  Y  +L FYK+AL+ +P+CP A+RLG+G C
Sbjct: 1   ADAQFNFVLNQSPNNIPSLLGKACIAFNKKDYRGALAFYKKALRTNPNCPAAVRLGMGHC 60

Query: 207 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY 266
            +KLG+  +AR AF+RALQLD + V ALV LA+++L       IR G++ + RA+     
Sbjct: 61  FHKLGKHDRARLAFERALQLDSQCVGALVGLAILELNNKTPDSIRNGVQMLSRAYATDST 120

Query: 267 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 324
             M LN+LANHFFF   +  V+ L   A   T +   ++ S Y LARS+H +GDY++A
Sbjct: 121 NPMVLNHLANHFFFKKDYSKVQHLALHAFQNTENEAMRAESCYQLARSFHIQGDYDQA 178


>gi|262302955|gb|ACY44070.1| SH2 domain binding protein [Polyzonium germanicum]
          Length = 178

 Score =  162 bits (410), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 79/178 (44%), Positives = 115/178 (64%)

Query: 147 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 206
           A + F  VL    +N+P+LLG+AC+ FN+  +  SL FYK+AL+ +P+CP  +RLG+G C
Sbjct: 1   ADAQFNFVLNQSPNNIPSLLGKACIAFNKKDHRGSLAFYKKALRTNPNCPADVRLGMGHC 60

Query: 207 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY 266
             KLG+  KAR AF+RALQLDP+ V ALV LA+++L +     IR G++ + +A+ I   
Sbjct: 61  FVKLGKPDKARLAFERALQLDPQCVGALVGLAILELNSKTTDSIRHGVQMLSKAYTIDSS 120

Query: 267 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 324
             M LN+LANHFFF   +  V+ L   A   T +   ++ S Y LARS+H + DY++A
Sbjct: 121 NPMVLNHLANHFFFKKDYQKVQHLALHAFHNTENEAMRAESCYQLARSFHVQNDYDQA 178



 Score = 43.9 bits (102), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 33/114 (28%), Positives = 59/114 (51%), Gaps = 10/114 (8%)

Query: 357 DFRSALTNFEKVLEIYPDNC--ETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFI 414
           D R +L  ++K L   P NC  +    +GH +V+LG+ +KA+    +A ++DP+   A +
Sbjct: 31  DHRGSLAFYKKALRTNP-NCPADVRLGMGHCFVKLGKPDKARLAFERALQLDPQCVGALV 89

Query: 415 DLGELLISSDTGAALDAFKTARTLLKKA---GEEVPIEVLNNIGVIHFEKGEFE 465
            L  L ++S T    D+ +    +L KA       P+ VLN++    F K +++
Sbjct: 90  GLAILELNSKT---TDSIRHGVQMLSKAYTIDSSNPM-VLNHLANHFFFKKDYQ 139


>gi|380477354|emb|CCF44207.1| tetratricopeptide [Colletotrichum higginsianum]
          Length = 1205

 Score =  162 bits (410), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 245/1047 (23%), Positives = 430/1047 (41%), Gaps = 197/1047 (18%)

Query: 2    ACVYIPVQNSEEEVRVALD--QLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQF 59
            A + +PVQ   E+  V +D  +L  D +++  + + E+A    W+ +A  Y KQ K++  
Sbjct: 29   AAIDVPVQGEAEDEAVEIDLLELFDDPTELCTLFENERAARTYWMTVALAYAKQKKIDHA 88

Query: 60   RQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYL----------GKIETKQREKEEH 109
             ++L  G +   D    +   E+++++  L   Y +           G++ ++ + KE +
Sbjct: 89   IEMLVRGGNAMRD----NNPREKLSMIGCLCWMYLWKSREAPRVPPDGELASEAKTKEYY 144

Query: 110  FILATQYYNKASRIDMHEPSTWVGKG--QLLLAKGEVEQAS--------------SAFKI 153
              LAT   N ASRI+   P  ++ +G  QLL A  +  +AS              SA K 
Sbjct: 145  LQLATSTLNDASRINPAFPPLFLARGVLQLLRASLQTPKASGHGQVDSEKADLLRSALKA 204

Query: 154  VLEADR----DNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS-CPGAIRLGIGLCRY 208
              +A R     N+ A++G+A   F+ G+Y +SL  Y+  LQ  P       R+GIG C +
Sbjct: 205  FEDAIRVSQGKNMLAVMGKARTFFSLGKYPESLACYQEVLQKMPDFVDPDPRIGIGCCFW 264

Query: 209  KLGQLGKARQAFQRALQLDPENVEALVALAVMDLQA------NEAAGIR---KGM-EKMQ 258
            +LG    A+ A++R L+++P++    + L +  L A      N    +R   K M E  Q
Sbjct: 265  QLGFKDDAKLAWERCLEINPDHKVGNILLGLYYLDASGHIPTNSPDFLRLYKKAMTEYTQ 324

Query: 259  RAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSK 318
            ++F++     +     A +F    Q   V+ L   A+  T+     S  +Y LAR  H  
Sbjct: 325  KSFKLDKNMPLTCATFAGYFLSRKQLSTVDSLAHKAIQYTDVNAIASDGWYLLARKEHYT 384

Query: 319  GDYEKAGLYYMASVKEINKPHEFIFP-YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCE 377
            GD E+A  +Y  +            P  +G  Q+ +  GD   A    EK+++    N E
Sbjct: 385  GDPERASDFYRRADDARGGAERGYLPAKFGAAQLAVLRGDLGEAKLRLEKMIQ-QSKNHE 443

Query: 378  TLKALGHIYVQ--------------LGQIEKAQELL-------RKAAKIDPRDAQAFIDL 416
             +  LG +Y +                +++KA  LL       + + K    DA   ++L
Sbjct: 444  AMILLGTLYAEEVFANEEADGKEDKSAEMKKAISLLEGVRGSWKDSKKGMSPDAAVLLNL 503

Query: 417  GEL-----------------------LISSDTGAALDAFKTARTLLKKAGEEVPIEVLNN 453
              L                       +   D    L      R  L+K    +P ++LNN
Sbjct: 504  ARLYEHEFPERAQQCLLQVEQLELDQIPEDDYPTDLTDEAEKRAALRKF---LPPQLLNN 560

Query: 454  IGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFEN 513
            IG  + +  + E A + F+ ALG  + +   D +     ID  A +              
Sbjct: 561  IGCFYSQSEKHEQASEMFEAALGACMKIGEKDQE-----IDTDALV-------------- 601

Query: 514  DGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARN 573
                        T+ FNL R  E       +  +Y  +L ++ DY DA  RLA I K R 
Sbjct: 602  -----------TTISFNLGRSYESQGLYDRSIEVYEGLLKRHDDYTDARTRLAYI-KLRK 649

Query: 574  NLQLSIELVNEALKVNGKYPNALSML-----GDLEL--------------KNDDWVKAKE 614
            N              N + P+A+S L      DLE+              K    +    
Sbjct: 650  N-------------PNKEGPDAVSKLYQENPQDLEVRALYGWYMGKVHSRKRPQNINEDH 696

Query: 615  TFRAASDAT---DGKDSYATLSLGNWNYFAA--LRNEKRAPKLE-ATHLEKAKELYTRVI 668
             FR         D  D YA + +GN     A  +R E  + K + +    KA E + + +
Sbjct: 697  EFRHYKHTLQNYDKHDRYALVGMGNLYLIQAREMRRETDSDKAKRSATYSKAVEFFEKAL 756

Query: 669  VQHTSNLYAANGAGVVLAE-KGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQ 727
                 N YAA G  + + E K  +  +  +F ++++       ++   V++NL H+Y   
Sbjct: 757  SLDPKNAYAAQGIAIAMVEDKKDYKTALGIFVKIRDT------IRDAHVYVNLGHIYAEL 810

Query: 728  GNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEA-------EQWQDCKKSLLRAIHLA 780
              ++ A++ Y+  L K     D  IL  L RT           + + +  K   +A+  A
Sbjct: 811  RQYSKAIENYEAALSKEGKANDPVILACLGRTWLNKGRSEKLLDAYHEALKYAQKALEAA 870

Query: 781  PSNYTLRFDAGVAMQKFSAST--LQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLH 838
            P     +F+      + + +   L + +RT  +++     LE+A+     +++       
Sbjct: 871  PDQVHYKFNVAFVQIQMATTVYGLNENQRTLAQLQEAATGLESAISALDEIASHPQTPYP 930

Query: 839  GFD-EKKINTHVEYCKHLLDAAKIHREAAERE-EQQNRQRQEAA---RQAALAEEARRKA 893
              D E++ N      +  L+ A     A+++E E++N+++ +AA   RQA L     RK 
Sbjct: 931  KHDVEQRANMARNTQRKQLERAI----ASQKEYEERNKEKLQAALEQRQAEL-----RKR 981

Query: 894  EEQKKYLLEKRKLEDEQKRLRQQEEHF 920
            EE+++  LEK +  + Q+++R++ E  
Sbjct: 982  EEERQKALEKER--ERQEKIRKEREEI 1006


>gi|157939605|gb|ABW05527.1| SH2 domain binding protein [Mesocyclops edax]
          Length = 179

 Score =  162 bits (409), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 77/179 (43%), Positives = 117/179 (65%), Gaps = 2/179 (1%)

Query: 147 ASSAFKIVLEADRDNVPALLGQACVEFNRGR--YSDSLEFYKRALQVHPSCPGAIRLGIG 204
           A++ F  VL  + +N+PALLG+AC+ +N  +  Y  +L FYK+AL+ +P+CP ++RLG+G
Sbjct: 1   ANAQFDFVLNQEPNNIPALLGKACIAYNGSKKDYKGALAFYKKALRTNPNCPASVRLGLG 60

Query: 205 LCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIY 264
           LC YKLG   KAR AF+RA +LDP  V A+V  A++DL A +   I++G+ K+ +A+ I 
Sbjct: 61  LCYYKLGNEAKARMAFERAQELDPNCVGAIVGQAILDLNAQKTVAIQEGVRKLSKAYTID 120

Query: 265 PYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEK 323
           P   M LN+LANHFFF   +  V+ L   A   T +   ++ S Y LAR++H + D+ +
Sbjct: 121 PSNPMVLNHLANHFFFKKDYTKVQHLALHAFHNTENEAMRAESCYQLARAFHVQNDFTQ 179


>gi|262302951|gb|ACY44068.1| SH2 domain binding protein [Periplaneta americana]
          Length = 178

 Score =  162 bits (409), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 79/178 (44%), Positives = 114/178 (64%)

Query: 147 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 206
           A + F  VL    +N+P+LLG+AC+ FN+  +  +L FYK+AL+ +PSCP A+RLG+G C
Sbjct: 1   ADAQFNFVLNQSPNNIPSLLGKACIAFNKKDFRGALAFYKKALRTNPSCPAAVRLGMGHC 60

Query: 207 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY 266
             KLG   KAR AF+RALQLD + V ALV LA++ L   +   IR G++ + +A+ I   
Sbjct: 61  FMKLGNQDKARLAFERALQLDAQCVGALVGLAILKLNQQQPESIRTGVQMLSKAYTIDST 120

Query: 267 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 324
             M LN+LANHFFF   +  V+ L   A   T +   ++ S Y LAR++H +GDY++A
Sbjct: 121 NPMVLNHLANHFFFKKDYHKVQHLALHAFHNTENEAMRAESCYQLARAFHVQGDYDQA 178


>gi|262302907|gb|ACY44046.1| SH2 domain binding protein [Dinothrombium pandorae]
          Length = 178

 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 80/178 (44%), Positives = 115/178 (64%)

Query: 147 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 206
           A + F  VL    +N+P+LLG+AC+ FN+  Y  +L FYK+AL+ +P CP  +RLGIG C
Sbjct: 1   ADAQFNFVLNQSPNNIPSLLGKACIAFNKKEYRPALAFYKKALRHNPYCPADVRLGIGHC 60

Query: 207 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY 266
            YKLG+  KA+ AF+RALQLD   V ALV LA+++L       IR+G++ + +A+ I P 
Sbjct: 61  FYKLGKPEKAKLAFERALQLDTRCVGALVGLALLELNQKTNESIRRGVQMLSKAYTIDPT 120

Query: 267 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 324
             M LN+LANHFFF   +  V+ L   A   T +   ++ S Y LAR++H +GDY++A
Sbjct: 121 DPMVLNHLANHFFFKKDYSKVQHLALHAFHNTENEAMRAESCYQLARAFHIQGDYDQA 178


>gi|409080216|gb|EKM80576.1| hypothetical protein AGABI1DRAFT_126637 [Agaricus bisporus var.
           burnettii JB137-S8]
          Length = 1087

 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 222/1003 (22%), Positives = 422/1003 (42%), Gaps = 135/1003 (13%)

Query: 13  EEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQILE-------- 64
           E + + LD L  +  D+LD+LK  Q    +W  +A EY+++G ++   +I +        
Sbjct: 22  EVITIDLDNLDPNPDDVLDLLKDGQCRDWVWTKLAGEYWRKGYLDGAERIAQTAIESFQA 81

Query: 65  EGSSPEIDEYYADVRYERIAILNALGVYYTYLGK--IETKQREKEEHFILATQYYNKASR 122
            GS+  +   Y  +    IA   A   +     +  +  ++R K+ ++  A Q  N A R
Sbjct: 82  NGSTASLPPIYCLMANINIARSRAAPKHMLTDARQDVMNQERSKDVYYREAAQLLNAAER 141

Query: 123 I------DMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 176
           +       ++E   ++ +G   LA   ++ A  +F  VL     N+ ALLG+A + + R 
Sbjct: 142 VGRDTGESVNETLAFLTRGIQQLATRSMDDALRSFDGVLAVKPTNLVALLGKARILYARR 201

Query: 177 RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVA 236
            + D+L  ++  L+ +PSC    R+GIGLC + +    KAR A+QR+L+++P    A + 
Sbjct: 202 NFKDALRLFQDVLRYNPSCQPDPRIGIGLCFWSMDHKAKARVAWQRSLEINPHEWAAQLL 261

Query: 237 LAVMDLQANE---------AAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLV 287
           L +  + A++          +    G + ++ AF+     A A N L   F   G     
Sbjct: 262 LGLDAINASKNTQLPEAERTSAFISGTKLVENAFKANQKSAAAANALCEIFLRKGNFKRA 321

Query: 288 EQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYG 347
            +L E  +   +     +  +    R  H++G + +A  +Y A+  E  K    +    G
Sbjct: 322 LKLAERTIQFADTLTIFTEGHLRAGRVCHAEGSHIQAKRFYSAATSEQPK---HVLGAIG 378

Query: 348 LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKAL------------GHIYVQLGQIE-K 394
           L Q+QL+  +  +A+   + +L+  P+  ++L+A             G     LGQ + +
Sbjct: 379 LAQMQLQHDEIPAAIHTLDTLLQP-PNPQKSLEATVMLASLRAHPRPGVSSADLGQEKMR 437

Query: 395 AQELLRKAAKIDPRD------------AQAFIDLGELLISSD---TGAALD----AFKTA 435
           A++L  +  K    D            ++A +D  ++ +       G  LD    A K A
Sbjct: 438 ARDLFERVGKSIELDEVRTNGHDTSHASRAILDDMDMHVEIARLWQGENLDRMRKALKEA 497

Query: 436 RTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDA 495
             + +  G+  P  +LNN+GV+   + ++ SA   ++DAL     L++          D 
Sbjct: 498 LRISEATGKVDP-RLLNNLGVLQHLESDYASARTMYEDALTTAAHLSM----------DI 546

Query: 496 SASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKY 555
           S +M                          ++L+NLAR+ E   D   A   Y  +L ++
Sbjct: 547 SEAM------------------------STSILYNLARVYEDQSDVDLAREAYEKLLSRH 582

Query: 556 QDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKET 615
            +YVDA +R A +    +    + EL+ + L       N  +      ++ +    AK+ 
Sbjct: 583 PEYVDAKIRQAQMYSNVSRHNDAHELIKQCLSSQNSSLNIRAFYTYFLIQTNSIKIAKDF 642

Query: 616 FRAASDATDGKDSYATLSLGNWNYFAALR----NEKRAPKLEATHLEKAKELYTRVIVQH 671
             +     D  D Y+  + G W  +   R    N     K      +++ E Y + +   
Sbjct: 643 VFSTLKDYDKYDVYSLCAAG-WIQYQQSRESRDNSADGVKERKRGFQRSAEFYEKALQLD 701

Query: 672 TSNLYAANGAGVVLAEKG----------QFDVSKDLFTQ-VQEAASG-SVFVQMPD---- 715
               +AA G  +V AE               VS D  ++ V+ A      FV++ +    
Sbjct: 702 PQCAFAAQGLAIVTAEDALGTLGGALPSTLPVSMDEGSKRVKNAGEALDTFVKVRESKDD 761

Query: 716 --VWINLAHVYFAQGNFALAMKMYQ-NCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKS 772
             V+ N+ H Y+A   +  A++  +     KFY   +  +L  L R+ Y ++  +D   S
Sbjct: 762 GSVYFNMGHCYYACDEYDRAIESVKYETASKFYEGHNVSVLQCLCRSWY-SKATKDQSYS 820

Query: 773 LL--------RAIHLAPSNYTLRFDAGVAMQKFSAS--TLQKTRRTADEVRSTVAELENA 822
            +        +A+H+ P +    ++  +  QK +     L   +RT  +++  +    +A
Sbjct: 821 AMTTALKYAQKALHIQPGDKATVYNIAMIQQKSAEMLFALPSAKRTLADLQRVIEWASHA 880

Query: 823 VRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEAARQ 882
            ++F+ L A     L  + +   +   +Y + +L  A+ H  A  + E + + R EAAR+
Sbjct: 881 QKIFASL-AEVKTQLVPYSKDIADNRRKYGESMLRKAEEHLSAQRQHEAETQGRLEAARR 939

Query: 883 AALAEEARRKAEE---QKKYLLEKRKLEDEQKRLRQQEEHFQR 922
               E  +++A E   Q+K  +E  +L + ++  R+Q   + R
Sbjct: 940 KRQEEREKQEAAERELQEKLRIEAEELTESRRAAREQAMEWTR 982


>gi|262302899|gb|ACY44042.1| SH2 domain binding protein [Ctenolepisma lineata]
          Length = 178

 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 80/178 (44%), Positives = 113/178 (63%)

Query: 147 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 206
           A + F  VL    +N+P+LLG+AC+ FN+  Y  +L FYK+AL+ +P+CP A+RLG+G C
Sbjct: 1   ADAQFDFVLNQSPNNIPSLLGKACIVFNKKDYRGALAFYKKALRTNPNCPAAVRLGMGHC 60

Query: 207 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY 266
             KLG   KAR AF+RALQLDP  V ALV LA++ L   +   IR G++ +  A+ I   
Sbjct: 61  FMKLGNQEKARLAFERALQLDPHCVGALVGLAILKLNQQQPESIRTGVQMLSMAYTIDST 120

Query: 267 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 324
             M LN+LANHFFF   +  V+ L   A   T +   ++ S Y LAR++H +GDY++A
Sbjct: 121 NPMVLNHLANHFFFKKDYHKVQHLALHAFHNTENEAMRAESCYMLARAFHVQGDYDQA 178


>gi|119182399|ref|XP_001242334.1| hypothetical protein CIMG_06230 [Coccidioides immitis RS]
 gi|392865229|gb|EAS31007.2| hypothetical protein CIMG_06230 [Coccidioides immitis RS]
          Length = 1210

 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 228/958 (23%), Positives = 387/958 (40%), Gaps = 188/958 (19%)

Query: 2   ACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQ 61
           + + IP  + + EV ++L++LP D +++  +L  EQA  + W+II+  Y K  +++   +
Sbjct: 34  SAIDIPASSFDTEVEISLEELPEDPTELCTLLDNEQATKNFWVIISLAYAKHNQLDLAIE 93

Query: 62  ILEEGSSPEIDEYYADVRYERIAILNALGVYYTYL------------GKIETKQREKEEH 109
           IL  G    I         E++ +LN   + + YL            G++ ++ R K+ +
Sbjct: 94  ILNRG----IASLSHGASVEKLGLLN--WICWLYLLKSRQAPRVAPEGQLLSEARTKDYY 147

Query: 110 FILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE------------------VEQASSAF 151
              AT   N+A+R++   P  ++ +G L L +                    VE    A 
Sbjct: 148 LQAATATLNEATRMNPAFPPLFLARGVLSLLRASLQPPAKPIRPGTVDTSERVESLRQAL 207

Query: 152 KIVLEADR----DNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGA-IRLGIGLC 206
           K   E+ +     NV A+LG+A  ++  GRY+++LE Y+  L   P+      R+GIG C
Sbjct: 208 KCFDESSKAFGNRNVMAILGRARAQYMLGRYAEALEGYQDVLMKMPNMTDPDPRIGIGCC 267

Query: 207 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDL-------QANEAAG--IRKGMEK- 256
            ++L    +A+ A+ RAL L+P +  A + LA   L         + A G   +  M + 
Sbjct: 268 LWQLDFKDQAKAAWNRALALNPNSKVANILLAAYYLYDSSRHATTDPAFGSLYKLAMTQY 327

Query: 257 MQRAFEI---YPY-CAMALNYLANHFFFTGQHF-LVEQLTETALAVTNHGPTKSHSYYNL 311
            Q+AF++   YP  CAM   Y     F   +HF  VE L   A+ +T+     S  +Y L
Sbjct: 328 TQKAFKLDKEYPLTCAMFGGY-----FLLRRHFPTVEALARKAIELTDVNAIASDGWYLL 382

Query: 312 ARSYHSKGDYEKAGLYYMASVKEINKPHEFIFP-YYGLGQVQLKLGDFRSALTNFEKVLE 370
           AR  H +GD  KA  YY  S +      +   P  +G  Q+Q+K  D   A    EK+ +
Sbjct: 383 ARKEHEEGDPSKAQEYYNRSDQARGGSDKGYLPAKFGAVQMQIKAHDKDGAKFRLEKIFQ 442

Query: 371 IYPDNCETLKALGHIYVQ--------------LGQIEKAQELLR--------KAAKIDPR 408
               N E +  LG +Y +                +I+KA  LL         +  KI P 
Sbjct: 443 -QKKNPEAMTLLGSLYAEEIFEALASGNKEDKSTEIKKAIGLLEAVRASWKDEKKKISP- 500

Query: 409 DAQAFIDLGELLISSDTGAAL--------------------DAFKTARTLLKKAGEEVPI 448
           D    + L  L  +S    ++                    D  +   T+     E +  
Sbjct: 501 DISVLLYLARLYETSAPEKSMQCLSQIEQIQLAQIPQEDRPDNVEDEETMTNILRERLAP 560

Query: 449 EVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLF 508
           ++LNN+G   ++  + E A   F+ AL   +     D  T T  +               
Sbjct: 561 QLLNNMGCFFYQADKIEQARNMFQTALNACVKTQEKDDGTDTDAL--------------- 605

Query: 509 HRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAI 568
                            T+ +NL R  E       A  +Y+ +L ++ DY +A  RL  +
Sbjct: 606 ---------------VTTISYNLGRTYETAGMPEEAEKVYKGLLERHSDYTEANARLTYM 650

Query: 569 AKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDD------WVKAKETFRAASDA 622
           A       L     +E        P  ++ L + E  N +      W   K   R A+ A
Sbjct: 651 A-------LRQSPTDEG-------PKKMAKLYEAEATNLEVRALFGWYLNKSKRRTANIA 696

Query: 623 TDGK--------------DSYATLSLGNWNYFAA--LRNEKRAPKLEATHL-EKAKELYT 665
            D +              D Y+  ++GN +   A  +R +    + +   + E+A E + 
Sbjct: 697 EDHEQRHHKHTLQGYDKHDRYSLTAMGNIHLMVARDMRRDGEQDREKRRKVYERAVEFFD 756

Query: 666 RVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYF 725
           + +     N YAA G  + L      D  KD  + VQ  +     ++   V++NL HV+ 
Sbjct: 757 KALQLDPKNAYAAQGIAIAL-----VDDRKDYASAVQVFSKVRDSIRDASVYLNLGHVFA 811

Query: 726 AQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLL-------RAIH 778
               F+ +++ Y+  L K     D QIL  L R  +   + +    S+        RA  
Sbjct: 812 ELRQFSKSIENYEIALSKDRAK-DPQILSCLGRVWFLKGKQERSITSMRTALEYAERARA 870

Query: 779 LAPSNYTLRFDAGVAMQKFS--ASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASN 834
           +AP    L F+      + +  AS L +T++T+ E+   ++ L+ AV  F  ++ A N
Sbjct: 871 VAPEQKHLDFNIAFVQNEIAHLASNLPETQKTSQEIEEALSGLDEAVVTFEKIAKAPN 928


>gi|262302889|gb|ACY44037.1| SH2 domain binding protein [Ammothea hilgendorfi]
          Length = 178

 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 79/178 (44%), Positives = 113/178 (63%)

Query: 147 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 206
           A + F  VL    +N+P+LLG+AC+ F +  Y  +L FYK+AL+ +P CP A+RLG+  C
Sbjct: 1   ADAQFNFVLGQSPNNIPSLLGKACIAFTKKDYRGALTFYKKALRTNPLCPAAVRLGMAHC 60

Query: 207 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY 266
            +KLG+L KAR AF+RAL+LDP  V ALV LAVM+L       IR G++ + +A+ I   
Sbjct: 61  FHKLGKLEKARLAFERALELDPHCVGALVGLAVMELNLKTPESIRNGVQMLSKAYTIDSS 120

Query: 267 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 324
             M LN+LANHFFF   +  V+ L    +  T +   ++ S Y LARS+H + DY++A
Sbjct: 121 NPMVLNHLANHFFFKKDYSKVQHLAHHGIRNTENEAMRAESCYQLARSFHVQSDYDQA 178


>gi|361129893|gb|EHL01769.1| putative Tetratricopeptide repeat protein 1 [Glarea lozoyensis 74030]
          Length = 1581

 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 247/1044 (23%), Positives = 437/1044 (41%), Gaps = 188/1044 (18%)

Query: 3    CVYIPVQNSEEE-VRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQ 61
             + IPVQ  ++E V + L++L  D +++  +L+ E A    W+ ++  Y KQ KV+   +
Sbjct: 422  AIDIPVQEGDDEAVEIDLEELLDDTTELCTLLENEGAARTYWMTVSLAYAKQKKVDTAIE 481

Query: 62   ILEEGSSPEIDEYYADVRYERIAILNALGVYYTYL----------GKIETKQREKEEHFI 111
            +L +G      +       E++++L  L   Y +           G + ++ R K+    
Sbjct: 482  LLIKGG-----QVMRGGPREKLSMLTCLCWMYLWKSREAPRVAPEGVLPSEARTKDYFLG 536

Query: 112  LATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQAS-SAFKIVLEADR----------- 159
            L+T   N+A RI+   P  ++ +G L L K  ++  S SA    ++ D+           
Sbjct: 537  LSTSTLNEALRINPAFPPLFLARGVLQLLKASLQPPSKSAAPGAIDIDKAEILRASLKSF 596

Query: 160  ---------DNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSC--PGAIRLGIGLCRY 208
                      N+ A+LG++   ++ G+++++LE Y+  L   P    P   R+GIG C +
Sbjct: 597  EDAIRVSQGRNMMAVLGKSRALYSLGKFAEALEGYQEVLHKMPELVDPDP-RIGIGCCFW 655

Query: 209  KLGQLGKARQAFQRALQLDPENVEALVALAVMDLQA------NEAAGIR---KGM-EKMQ 258
            +LG    A+ A++RAL++ P++  A + L +  L A      N    IR   K M E  Q
Sbjct: 656  QLGFKEDAKTAWERALEISPDSKTANILLGLFYLDASAHVPTNGPEFIRLYKKAMTEYTQ 715

Query: 259  RAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSK 318
            +AF+      +     A +F        V+ L   A+  T+     S  +Y LAR  H  
Sbjct: 716  KAFKADKDLPLTCATFAGYFLSRKSLPNVDTLAHKAIQYTDVNAIASDGWYLLARKEHYD 775

Query: 319  GDYEKAGLYYMASVKEINKPHEFIFPY-YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCE 377
             DYE+A  YY  + +          P  +G  Q+ +   DF  A    EK+++    N E
Sbjct: 776  EDYERATDYYRRADEARGGAERGYLPAKFGAAQLAVLKSDFGEAKLRLEKIIQ-QSKNIE 834

Query: 378  TLKALGHIYVQ---------------------LGQIEKAQELLRKAAKIDPRDAQAFIDL 416
             +  LG +Y +                     +G +E A+   +   K    D+   ++L
Sbjct: 835  AMVLLGTLYAEEVFVSQQSAVKEDKSTEFKKAIGYLETARNAWKDPKKNLIADSSVLLNL 894

Query: 417  GELLISSDTGAALDAFKTARTL-------------------LKKA-GEEVPIEVLNNIGV 456
              L        +L   +    +                   LK++  E +P ++LNN+G 
Sbjct: 895  ARLYEVDQPEKSLQCLQQVEQIEYDRLPKDEKPDDPEEIAALKESLREGLPPQLLNNMGC 954

Query: 457  IHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGN 516
             +++  +FE A   F+ AL                      + ++  + Q     E DG+
Sbjct: 955  FYYQSEKFEQAGAMFQVALN---------------------ACMKITETQE----ELDGD 989

Query: 517  HVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQ 576
             +       T+ +NL R  E       A+ +Y  +L ++ +Y DA  R A IA  +N   
Sbjct: 990  AL-----VTTISYNLGRTYEASGQLDEANTVYEGLLARHDNYTDARTRQAYIALRQNPTD 1044

Query: 577  LSIELVNE-------ALKVNGKYP------NALSMLGDLELKNDDWVKAKETFRAASDAT 623
               + + E        L+V   Y       N+   +G+L  ++ +    K T +      
Sbjct: 1045 DGPKKMGELYKDASADLEVRALYGWYLGRVNSRKKIGNL-AEDSELRHYKHTLQ----GY 1099

Query: 624  DGKDSYATLSLGNWNYFAA--LRNEKRAPKLEATHL-EKAKELYTRVIVQHTSNLYAANG 680
            D  D YA + +GN     A  +R E    K + + +  KA E + + +     N YAA G
Sbjct: 1100 DKHDRYALIGMGNLYLMTAREMRRETDQDKQKRSAMYTKAVEFFDKALQLDPKNAYAAQG 1159

Query: 681  AGVVLAE-KGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQN 739
              + L E K     +  +F +V+E       V+ P V++NL HV+     ++ A++ Y+ 
Sbjct: 1160 IAIALVEDKKDLKTALSIFVKVRET------VKDPSVFVNLGHVFAELHQYSKAVEHYEA 1213

Query: 740  CLRKFYYNTDAQILLYLARTHY---EAEQ----WQDCKKSLLRAIHLAPSNYTLRFDAGV 792
             L K   + DAQIL  L RT      AE+    +++  +  L+A+ LAP          +
Sbjct: 1214 ALSK-DRSRDAQILACLGRTWLAKGRAEKNLTGYKNALEYSLKALELAPEQ--------L 1264

Query: 793  AMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLS--AASNLHLHGFDEK---KINT 847
            A   +     Q   RT  EV++    LE A+     ++    +    H  +++     NT
Sbjct: 1265 ATAVYGTPEAQ---RTLAEVQAAAEGLEAAIESLEAIAQHPQTPFPKHDIEQRANMARNT 1321

Query: 848  HVEYCKHLLDAAKIHRE-------AAEREEQQNRQRQEAARQAALAEEARRK---AEEQK 897
              +  +  + A K + E       AA+++ ++  +R+E A++AA   E  RK   AEE++
Sbjct: 1322 MRKQLERSIQAQKEYEEKNFEKLQAAKQKREEELKRREDAKKAAQQAELDRKLKIAEERQ 1381

Query: 898  KYLLEKRKLED---EQKRLRQQEE 918
            K   + R+L D   E+ R R+  E
Sbjct: 1382 KIAEKDRELADLRAEEDRAREAAE 1405


>gi|262302923|gb|ACY44054.1| SH2 domain binding protein [Heterometrus spinifer]
          Length = 178

 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 79/178 (44%), Positives = 113/178 (63%)

Query: 147 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 206
           A + F  VL    +N+P+LLG+AC+ FN+  Y  +L FYK+AL+ +P CP A+RLG+G C
Sbjct: 1   ADAQFNFVLNQSPNNIPSLLGKACIAFNKKDYRGALAFYKKALRTNPKCPAAVRLGMGHC 60

Query: 207 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY 266
            YK  +  KAR AF+RALQLDP+ V ALV  AV++L       IR G++ + +A+ I P 
Sbjct: 61  FYKSNKQDKARLAFERALQLDPQCVGALVGQAVLELNQKTPESIRNGVQMLSKAYSIDPS 120

Query: 267 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 324
             M LN+LANHFFF   +  V+ L   A   T +   ++ S Y LAR++H + DY++A
Sbjct: 121 NPMVLNHLANHFFFKKDYDKVQHLALHAFHNTENEAMRAESCYQLARAFHIQEDYDQA 178


>gi|392569622|gb|EIW62795.1| RNA polymerase II-associated protein [Trametes versicolor FP-101664
           SS1]
          Length = 1098

 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 218/1023 (21%), Positives = 424/1023 (41%), Gaps = 167/1023 (16%)

Query: 12  EEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQILEEG----- 66
           +E + + LD L  +  D+L++L+  Q  + +W  +A EY+++G V+   +I +       
Sbjct: 23  QEVITIELDNLDPNPDDLLEVLREGQCKVWIWTRLAAEYWRRGLVDAAEKIAQTAVETLQ 82

Query: 67  ------SSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKA 120
                 S P +  + A++   R +    L +       I+ K R+  E+   A + +N  
Sbjct: 83  ATGATASLPPVYSFLANLHIARASKAPKLKLPNARQDVIKEKIRD--EYNRDAAKVFNDG 140

Query: 121 SRIDMHEPSTW-----VGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNR 175
            R+      +      + +G L L+ G  + A+  F  VL     NV ALLG+A + + R
Sbjct: 141 ERVASENGQSGTMLAILTRGILQLSTGVWDDAARTFDAVLAEKPTNVVALLGKAKIAYAR 200

Query: 176 GRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEA-- 233
            +YS +L+ +++ LQ++P+C    R+GIGLC + +    KA+ A+QR++ ++P    A  
Sbjct: 201 RQYSQALKLFQKVLQLNPNCHPDPRIGIGLCLWAMDHKAKAKSAWQRSIDVNPGEWSAQL 260

Query: 234 LVALAVMDLQANEAAG-------IRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFL 286
           L+ +  ++   +EA           +G   +++AF      + A N L   F   GQ   
Sbjct: 261 LLGIEALNTSKDEAQSEEDRREEFLRGTRLIEKAFNANQKNSAAANALCELFLQKGQTKR 320

Query: 287 VEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYY 346
             +L E  +   +        Y    R  H +     A + +    KE  K  + +    
Sbjct: 321 ALKLAERTIQFADVKGIVCDGYIRAGRICHKEASIRDA-MTHFQKAKETKK--DNVLATI 377

Query: 347 GLGQVQLKLGDFRSALTNFEKVLEI--YPDNCETLKALGHIYV----------QLGQIEK 394
           GL Q+Q+K  +  +A+   +  ++    P + E +  L  +            ++ + ++
Sbjct: 378 GLAQLQVKNEEPAAAIHTLDTFMQTPANPKSVELMAMLASLRAMPRPGVSSADKVEEKKR 437

Query: 395 AQELLRKAAK--IDPRDA----------------------QAFIDLGELLISSDTGAALD 430
           A+EL  + +K    P D                       + FI++ +L           
Sbjct: 438 ARELFDRVSKAITTPADGLPHANGHTQPPSSSVRKLGDDFEMFIEIAKLYQDESHEKMTL 497

Query: 431 AFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKT 490
           A+K A    + +G+  P  ++NN+G +   +G  + A   ++ AL        LDS T  
Sbjct: 498 AYKQALKNSEVSGKTEP-RLVNNLGALQHLEGHLDEAQTLYETALTQAAG---LDSTTAE 553

Query: 491 YVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRL 550
            +                                 ++L+NLAR+ E   + + A   Y  
Sbjct: 554 AM-------------------------------STSILYNLARVYEDQGEEMKAKEAYEK 582

Query: 551 ILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWV 610
           +L ++ +YVDA +R A +    N    + EL+ + L       N  +      ++++   
Sbjct: 583 LLTRHPEYVDAKIRQAQMLAGLNRHNDAHELLKQVLSSQANNLNLRAFYTHFLIQSNLPK 642

Query: 611 KAKETFRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKL---EATHLEKAKELYTRV 667
            AK+         D  D Y+  + G   Y  A  N    PK          ++ E Y + 
Sbjct: 643 PAKDFVFLTLRDHDKHDVYSLCAAGWLQYHQARENRDGTPKGIEDRKRAFHRSAEFYEKA 702

Query: 668 IVQHTSNLYAANGAGVVLAEKGQFDVSK---------------------DLFTQVQEAAS 706
           +        AA G  +V+AE    ++                       D+F +V+E+ +
Sbjct: 703 LHLDPLCAIAAQGLAIVVAEDALGNLGGALGTIAPDEAQKRLKNSREALDIFAKVRESIN 762

Query: 707 -GSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQ 765
            GSV+        N+ H Y+A+  F  A++ Y+   ++FY N +  +LL L R  Y A+ 
Sbjct: 763 DGSVYA-------NMGHCYYARDEFDRAIESYETASKRFYSNQNVPVLLCLCRAWY-AKA 814

Query: 766 WQDCKKSLL--------RAIHLAPSNYTLRFDAGVAMQKFSA--STLQKTRRTADEVRST 815
            +D   + +        +A+HL P +    ++  +  QK +    ++  ++R+  +++  
Sbjct: 815 NKDQSFTAMNTALQYAQKALHLHPWDKATLYNIAMIQQKAAELLMSVPASKRSLKDMQKA 874

Query: 816 VAELENAVRVFSHLSAASNLHL-HGFD-----EKKINTHVEYC-KHL------------- 855
           + +  +  ++F+ L+A  +  + +  D      K   + +  C +HL             
Sbjct: 875 IEQATHGQKLFASLAADKSPQVPYSRDIADQRRKYGESMLRRCEEHLATQRQWEADAQAK 934

Query: 856 LDAAKIHREA-AEREEQQNRQRQEAARQAA--LAEEARRKAEEQKKYLLEKRKLEDEQKR 912
           ++AA+  R+A  ER +   R+RQE  R+ A  LAEE R   E+  ++  E +++E +++R
Sbjct: 935 IEAARQRRQAEKERLDAAERERQEELRKQAEKLAEERRIAREQALEWTREVKRMESDEER 994

Query: 913 LRQ 915
            +Q
Sbjct: 995 EKQ 997


>gi|240277292|gb|EER40801.1| tetratricopeptide repeat domain-containing protein [Ajellomyces
           capsulatus H143]
          Length = 1244

 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 224/962 (23%), Positives = 381/962 (39%), Gaps = 200/962 (20%)

Query: 2   ACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQ 61
           + + IP    + EV ++L++LP D +++  +L  E+A  + W+IIA  Y KQ +++    
Sbjct: 29  SAIDIPASTFDSEVEISLEELPDDPTELCTLLDNEKAAKNFWVIIALAYAKQNQIDHAID 88

Query: 62  ILEEGSSPEIDEYYADVRYERIAILNALGVYYTYL----------GKIETKQREKEEHFI 111
           IL  G    +      V  E++ +L  +   Y             G++ ++ + K+ +  
Sbjct: 89  ILNRG----LSSLAQGVTKEKLGLLGWICWLYMRKSREAPRVAPEGQLVSEAKTKDYYLQ 144

Query: 112 LATQYYNKASRIDMHEPSTWVGKGQLLLAKGE------------------VEQASSAFKI 153
            AT   N+ASR++   PS ++ +G L + +                    VE    A K 
Sbjct: 145 AATSTLNEASRLNPAYPSLFLARGVLSILRASLQPPAKALRPGTVDTSERVETLRQALKC 204

Query: 154 VLEADRD----NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGA-IRLGIGLCRY 208
             E+ +     NV A+LG+A  ++  GRY+++LE Y+  L   P+      R+GIG C +
Sbjct: 205 FDESAKSFGNRNVMAILGRARAQYMLGRYAEALEGYQEVLIKMPNMRDPDPRIGIGCCLW 264

Query: 209 KLGQLGKARQAFQRALQLDPENVEALVALAVMDL------QANEAAG---IRKGMEK-MQ 258
           +L    +A+ A+ RAL L+PE+  A + L    L        N+ A     +  M +  Q
Sbjct: 265 QLDFKEQAKAAWTRALALNPESKVANILLGAYYLYDSSRHATNDPAFGSLYKIAMTQYTQ 324

Query: 259 RAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSK 318
           +AF++     M  +    +F        VE L   A+ +T+     S  +Y LAR  H +
Sbjct: 325 KAFKVDKEYPMTCSMFGGYFLLRKHFPTVEALARKAIELTDVNAIASDGWYLLARKEHFE 384

Query: 319 GDYEKAGLYYMASVKEINKPHEFIFP-YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCE 377
           G+  +A  YY  S +          P  +G  Q+Q++ GD+  A    EK+++    N E
Sbjct: 385 GNSARANEYYSRSDQARGGGDSGYLPAKFGAVQMQVRTGDYDGAKFRLEKIIQ-QTKNPE 443

Query: 378 TLKALGHIYVQ--------------LGQIEKAQELLRKA--------AKIDPRDAQAFID 415
           ++  LG ++ +                +++KA  LL            K+ P D    + 
Sbjct: 444 SMTLLGALFAEEVFAAQSSPLKEDKSAEVKKATSLLESVRASWKDEKKKLSP-DESVLLY 502

Query: 416 LGELLISSDTGAALDAFK-----------------------TARTLLKKAGEEVPIEVLN 452
           L  L  S     ++   +                       T   LL+   E +  ++LN
Sbjct: 503 LARLYESGSPEKSMQCLQHVEQMQLAQIPDTERPEDIEDEETTTNLLR---EHLAPQLLN 559

Query: 453 NIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFE 512
           N+G   +   + E A   F+ AL        + S+ +    D  A +             
Sbjct: 560 NMGCFLYHSEKIELARNMFQTALN-----ACVKSRDRDDSADTDALV------------- 601

Query: 513 NDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKAR 572
                        T+ +NLAR  E       A  +Y  +L ++ DY +A  RL  IA   
Sbjct: 602 ------------TTISYNLARTYEAASMPEEAKKVYEGLLERHSDYTEANARLTYIA--- 646

Query: 573 NNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDD------WVKAKETFRAASDATDGK 626
               L     +E        P  ++ L +LE  N +      W  +K   R A+ A D +
Sbjct: 647 ----LRQSPTDEG-------PKKMAKLYELESTNLEVRALFGWYLSKSKRRVANIAEDHE 695

Query: 627 --------------DSYATLSLGNWNYFAALRNEKRAPKLEATH----LEKAKELYTRVI 668
                         D Y+   +GN  Y  A R+ KR  + +        EKA E + + +
Sbjct: 696 QRHYKHTLQGYDKHDRYSLTGMGNI-YLLAARDMKRDTEQDREKRRKMYEKAVEFFDKAL 754

Query: 669 VQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPD------VWINLAH 722
                N YAA G  + L      D  KD  T VQ      +F ++ D      V++NL H
Sbjct: 755 QLDPKNAYAAQGIAIAL-----VDDRKDYTTAVQ------IFSRIRDTLRDASVYLNLGH 803

Query: 723 VYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQ----------DCKKS 772
           VY     F+ +++ Y+  L K     D QIL  L R        +          DC + 
Sbjct: 804 VYAELRQFSKSIENYEAALSKD-RQRDTQILACLGRVWLLKGMQEMNLAAMNTALDCTQ- 861

Query: 773 LLRAIHLAPSNYTLRFDAGVAMQKFS--ASTLQKTRRTADEVRSTVAELENAVRVFSHLS 830
             RA  +AP    L F+      + +    +L +T+++  +V+     L+ A+  FS ++
Sbjct: 862 --RARAIAPEQIHLEFNVAFVQNQIAQLVVSLPETQKSLQDVQIASDGLDEAINTFSQIA 919

Query: 831 AA 832
            A
Sbjct: 920 KA 921


>gi|322699017|gb|EFY90782.1| RNA polymerase II transcription elongation factor (Ctr9), putative
            [Metarhizium acridum CQMa 102]
          Length = 1178

 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 250/1039 (24%), Positives = 438/1039 (42%), Gaps = 186/1039 (17%)

Query: 2    ACVYIPVQNSEEE--VRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQF 59
            + + IPVQ  +E+  V + L+ L  D +++  + + E+A    W+ +A  Y KQ K++  
Sbjct: 31   SAIDIPVQGDQEDEAVEIDLEDLLDDPTELCTLFENERAAKTYWMTVALAYAKQKKIDHA 90

Query: 60   RQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYL----------GKIETKQREKEEH 109
             ++L  GS        +    ++++++  L   Y +           G   ++ + KE +
Sbjct: 91   IEMLIRGSGA----IQSSNPRDKVSMICCLCWMYLWKSREAPRVAPDGVRVSEAKTKEYY 146

Query: 110  FILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQAS---------------SAFKIV 154
              LAT   N A+R++   P  ++ +G LLL +  ++  S               +A K  
Sbjct: 147  LQLATSSLNDAARLNPSFPPIFLARGVLLLLRASLQAPSKTAGGIGSEKNELLKTAVKSF 206

Query: 155  LEADR----DNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSC--PGAIRLGIGLCRY 208
             +A R     N+ AL+G+A   F+  +Y D+L  Y+  L   P    P   R+GIG C +
Sbjct: 207  DDALRVSQGKNMLALMGKARAYFSMHKYPDALATYQDILHKMPDLVDPDP-RIGIGCCFW 265

Query: 209  KLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGI---------RKGM-EKMQ 258
            +LG    A+ A++R+L+++PE+  A + L +  L A+    +         RK M E  Q
Sbjct: 266  QLGFKEDAKVAWERSLEINPESKIANILLGLFYLDASGHVPVNSDEFLKLYRKAMTEYTQ 325

Query: 259  RAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSK 318
            ++F++     +  +  A +F         E+L   A+  T+     S  +Y LAR  H  
Sbjct: 326  KSFKLDKEVPITCSTFAGYFLSRKAWENAEKLAHKAIQYTDVNAIASDGWYLLARKAHYN 385

Query: 319  GDYEKAGLYYMASVKEINKPHEFIFP-YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCE 377
             D EKA  YY  +            P  +G+ Q+ +   D   A    EK+++    N E
Sbjct: 386  DDTEKASDYYRRADDARGGADTGYLPAKFGVAQLSVLKNDLGEAKLRLEKMIQ-QSKNHE 444

Query: 378  TLKALGHIYVQ---LGQIEKAQE----LLRKAAKI---------DPR-----DAQAFIDL 416
             +  LG +Y +    GQ   ++E     ++KA  +         DP+     DA   ++L
Sbjct: 445  AMILLGTLYAEEIFAGQKSDSKEDKSAEMKKAITLLESVRNAWKDPKRTIAPDASVLLNL 504

Query: 417  GELLISSDTGAALDAFKTARTL--------------LKKAGEEV------PIEVLNNIGV 456
              L        AL   +    L                +A  +V      P ++LNNIG 
Sbjct: 505  ARLYELDQPEKALQCLQQVEQLELDQIPKSERPTDTENEAAAQVEMRKLLPPQLLNNIGC 564

Query: 457  IHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGN 516
             H +  + E A + F+ AL   + +     K  +   DA  S                  
Sbjct: 565  FHSQAEKHELASEMFEAALSACMRIG---EKEPSMDTDALVS------------------ 603

Query: 517  HVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQ 576
                     ++ FNL R  E    T  A  +Y  +L ++ DY DA  RLA I K R N  
Sbjct: 604  ---------SISFNLGRSYESRGLTDKAMEVYEGLLARHDDYTDARTRLAYI-KLRKN-- 651

Query: 577  LSIELVNEALKVNGKYPNALSML-----GDLELKN-DDWV--KAKETFRAASDATDGK-- 626
                        N + P+A++ L      DLE++    W   K     R A+   D +  
Sbjct: 652  -----------PNKEGPDAVAKLYQENTSDLEVRALYGWYLGKVHSRKRPANIVEDPEFR 700

Query: 627  ------------DSYATLSLGNWNYFAA--LRNEKRAPKLEATHL-EKAKELYTRVIVQH 671
                        D YA + +GN     A  +R E  + K + + +  KA E + + +   
Sbjct: 701  HYKHTLQNYDKHDRYALIGMGNLYLLQAREMRRETESDKQKRSVIYGKAVEFFEKALSLD 760

Query: 672  TSNLYAANGAGVVLAE-KGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNF 730
              N YAA G  + L E K  +  +  +F +V+E       V+ P V++NL HV+     +
Sbjct: 761  PKNAYAAQGVAIALVEDKKDYKSALTIFNKVRET------VREPHVYVNLGHVFAELRQY 814

Query: 731  ALAMKMYQNCLRKFYYNTDAQILLYLART-------HYEAEQWQDCKKSLLRAIHLAPSN 783
            + A++ Y+  L K     D  IL  L RT         + + +    +   +A+ +AP  
Sbjct: 815  SKAIENYEIALTKDGKANDPVILSCLGRTWLNRGRSERDIDAYGKALECAQQALEVAPDQ 874

Query: 784  YTLRFD-AGVAMQKFSA-STLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGFD 841
               +F+ A V +Q  +    L + RRTA+++ +  A LE A+     L A + L    + 
Sbjct: 875  VHYKFNVAFVQIQLVTTIQNLPENRRTAEQLETAAAGLEAAI---ESLDAIATLPQTPYP 931

Query: 842  EKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQ--EAARQAALAEEARRKAEEQKKY 899
            +  I       ++ L   ++ R  A+++E + + ++  +AA++   AE  RR  EEQ++ 
Sbjct: 932  KHDIEQRANMARNTL-RKQLERAIAKQKEWEEKNKEKIQAAKEQREAELKRR--EEQRQE 988

Query: 900  LLEKRKLEDEQKRLRQQEE 918
            +LEK +  + Q+++R++ E
Sbjct: 989  ILEKER--ERQEKIRKERE 1005


>gi|426197114|gb|EKV47041.1| hypothetical protein AGABI2DRAFT_117626 [Agaricus bisporus var.
           bisporus H97]
          Length = 1093

 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 223/1003 (22%), Positives = 422/1003 (42%), Gaps = 135/1003 (13%)

Query: 13  EEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQILE-------- 64
           E + + LD L  +  D+LD+LK  Q    +W  +A EY+++G ++   +I +        
Sbjct: 22  EVITIDLDNLDPNPDDVLDLLKDGQCRDWVWTKLAGEYWRKGYLDGAERIAQTAIESFQA 81

Query: 65  EGSSPEIDEYYADVRYERIAILNALGVYYTYLGK--IETKQREKEEHFILATQYYNKASR 122
            GS+  +   Y  +    IA   A   +     +  +  ++R K+ ++  A Q  N A R
Sbjct: 82  NGSTASLPPIYCLMANINIARSRAAPKHILTDARQDVMNQERSKDVYYREAAQLLNAAER 141

Query: 123 I------DMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 176
           +       ++E   ++ +G   LA   ++ A  +F  VL     N+ ALLG+A + + R 
Sbjct: 142 VGRDTGESVNETLAFLTRGIQQLATRSMDDALRSFDGVLAVKPTNLVALLGKARILYARR 201

Query: 177 RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVA 236
            + D+L  ++  L+ +PSC    R+GIGLC + +    KAR A+QR+L+++P    A + 
Sbjct: 202 NFKDALRLFQDVLRYNPSCQPDPRIGIGLCFWSMDHKAKARVAWQRSLEINPHEWAAQLL 261

Query: 237 LAVMDLQANE---------AAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLV 287
           L +  + A++          +    G + ++ AF+     A A N L   F   G     
Sbjct: 262 LGLDAINASKNTQLPEAERTSAFISGTKLVENAFKANQKSAAAANALCEIFLRKGNFKRA 321

Query: 288 EQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYG 347
            +L E  +   +     +  +    R  H++G + +A  +Y A+  E  K    +    G
Sbjct: 322 LKLAERTIQFADTLTIFTEGHLRAGRVCHAEGSHIQAKRFYSAATSEQPK---HVLGAIG 378

Query: 348 LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKAL------------GHIYVQLGQIE-K 394
           L Q+QL+  +  +A+   + +L+  P+  ++L+A             G     LGQ + +
Sbjct: 379 LAQMQLQHDEIPAAIHTLDTLLQP-PNPQKSLEATVMLASLRAHPRPGVSSADLGQEKMR 437

Query: 395 AQELLRKAAKIDPRD------------AQAFIDLGELLISSD---TGAALD----AFKTA 435
           A++L  +  K    D            ++A +D  ++ +       G  LD    A K A
Sbjct: 438 ARDLFERVGKSIELDEVRTNGHDTSHASRAILDDMDMHVEIARLWQGENLDRMRKALKEA 497

Query: 436 RTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDA 495
             + +  G+  P  +LNN+GV+   + ++ SA   ++DAL     L++          D 
Sbjct: 498 LRISEATGKVDP-RLLNNLGVLQHLESDYASARTMYEDALTTAAHLSM----------DI 546

Query: 496 SASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKY 555
           S +M                          ++L+NLAR+ E   D   A   Y  +L ++
Sbjct: 547 SEAM------------------------STSILYNLARVYEDQSDVDLAREAYEKLLSRH 582

Query: 556 QDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKET 615
            +YVDA +R A +    +    + ELV + L       N  +      ++ +    AK+ 
Sbjct: 583 PEYVDAKIRQAQMYSNVSRHNDAHELVKQCLSSQNSSLNIRAFYTYFLIQTNSIKIAKDF 642

Query: 616 FRAASDATDGKDSYATLSLGNWNYFAALR----NEKRAPKLEATHLEKAKELYTRVIVQH 671
             +     D  D Y+  + G W  +   R    N     K      +++ E Y + +   
Sbjct: 643 VFSTLKDYDKYDVYSLCAAG-WIQYQQSRESRDNSADGVKERKRGFQRSAEFYEKALQLD 701

Query: 672 TSNLYAANGAGVVLAEKG----------QFDVSKDLFTQ-VQEAASG-SVFVQMPD---- 715
               +AA G  +V AE               VS D  ++ V+ A      FV++ +    
Sbjct: 702 PQCAFAAQGLAIVTAEDALGTLGGALPSTLPVSMDEGSKRVKNAREALDTFVKVRESKDD 761

Query: 716 --VWINLAHVYFAQGNFALAMKMYQ-NCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKS 772
             V+ N+ H Y+A   +  A++  +     KFY   +  +L  L R+ Y ++  +D   S
Sbjct: 762 GSVYFNMGHCYYACDEYDRAIESVKYETASKFYEGHNVSVLQCLCRSWY-SKATKDQSYS 820

Query: 773 LL--------RAIHLAPSNYTLRFDAGVAMQKFSAS--TLQKTRRTADEVRSTVAELENA 822
            +        +A+H+ P +    ++  +  QK +     L   +RT  +++  +    +A
Sbjct: 821 AMTTALKYAQKALHIQPGDKATVYNIAMIQQKSAEMLFALPSAKRTLADLQRVIEWASHA 880

Query: 823 VRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEAARQ 882
            ++F+ L A     L  + +   +   +Y + +L  A+ H  A  + E + + R EAAR+
Sbjct: 881 QKIFASL-AEVKTQLVPYSKDIADNRRKYGESMLRKAEEHLSAQRQHEAETQGRLEAARR 939

Query: 883 AALAEEARRKAEE---QKKYLLEKRKLEDEQKRLRQQEEHFQR 922
               E  +++A E   Q+K  +E  +L + ++  R+Q   + R
Sbjct: 940 KRQEEREKQEAAERELQEKLRIEAEELTESRRAAREQAMEWTR 982


>gi|262302919|gb|ACY44052.1| SH2 domain binding protein [Hadrurus arizonensis]
          Length = 178

 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 79/178 (44%), Positives = 113/178 (63%)

Query: 147 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 206
           A + F  VL    +N+P+LLG+AC+ FN+  Y  +L FYK+AL+ +P CP A+RLG+G C
Sbjct: 1   ADAQFNFVLNQSPNNIPSLLGKACIAFNKKDYRGALAFYKKALRTNPKCPAAVRLGMGHC 60

Query: 207 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY 266
            YK  +  KAR AF+RALQLDP+ V ALV  AV++L       IR G++ + +A+ I P 
Sbjct: 61  FYKSNKQDKARLAFERALQLDPQCVGALVGQAVLELNLKTPDSIRNGVQMLSKAYSIDPS 120

Query: 267 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 324
             M LN+LANHFFF   +  V+ L   A   T +   ++ S Y LAR++H + DY++A
Sbjct: 121 NPMVLNHLANHFFFKKDYDKVQHLALHAFHNTENEAMRAESCYQLARAFHIQEDYDQA 178


>gi|262302893|gb|ACY44039.1| SH2 domain binding protein [Amblyomma sp. 'Amb2']
          Length = 178

 Score =  160 bits (406), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 78/178 (43%), Positives = 112/178 (62%)

Query: 147 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 206
           A + F  VL    +N+P+LLG+AC+ FN+  Y  +L FYK+AL+ +P+CP  +RLG+G C
Sbjct: 1   ADAQFNFVLNQSPNNIPSLLGKACIAFNKKDYRGALAFYKKALRTNPNCPAEVRLGMGHC 60

Query: 207 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY 266
            Y+LG+  KAR AF+RAL LDP+ V AL  LAV+ L        R G++ + RA+ + P 
Sbjct: 61  LYRLGKQEKARAAFERALVLDPQCVGALSGLAVLQLNQKGTEATRAGVQMLSRAYAVDPS 120

Query: 267 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 324
           C + LN LANHFFF   +  V+ L   A   T +   ++ S Y LARS+H + DY++A
Sbjct: 121 CPVVLNQLANHFFFKKDYGKVQHLALHAFHNTENEAMRAESCYQLARSFHVQEDYDQA 178



 Score = 40.8 bits (94), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 53/107 (49%), Gaps = 6/107 (5%)

Query: 94  TYLGKIETKQREKEEHFILATQYYNKASRIDMHEPS-TWVGKGQLLLAKGEVEQASSAFK 152
           + LGK      +K+    LA  +Y KA R + + P+   +G G  L   G+ E+A +AF+
Sbjct: 18  SLLGKACIAFNKKDYRGALA--FYKKALRTNPNCPAEVRLGMGHCLYRLGKQEKARAAFE 75

Query: 153 IVLEADRDNVPALLGQACVEFN-RGRYSD--SLEFYKRALQVHPSCP 196
             L  D   V AL G A ++ N +G  +    ++   RA  V PSCP
Sbjct: 76  RALVLDPQCVGALSGLAVLQLNQKGTEATRAGVQMLSRAYAVDPSCP 122


>gi|225685042|gb|EEH23326.1| tetratricopeptide repeat protein [Paracoccidioides brasiliensis
           Pb03]
          Length = 1252

 Score =  160 bits (406), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 232/967 (23%), Positives = 387/967 (40%), Gaps = 210/967 (21%)

Query: 2   ACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQ 61
           + + IP    + EV ++L++LP D +++  +L  E+A  + W+IIA  Y KQ +++    
Sbjct: 30  SAIDIPASTFDSEVEISLEELPDDPTELCTLLDNEKAAKNFWVIIALAYAKQNQIDHAID 89

Query: 62  ILEEGSSPEIDEYYADVRYERIAILNALGVYYTYL----------GKIETKQREKEEHFI 111
           IL  G    +      +  E++ +L  +   Y             G++ ++ + K+ +  
Sbjct: 90  ILNRG----LSSLAQGMTKEKLGLLGWICWLYMLKARQAPRVALEGQLVSEAKTKDFYLQ 145

Query: 112 LATQYYNKASRIDMHEPSTWVGKGQLLLAKGE------------------VEQASSAFKI 153
            AT   N+ASR++   P  ++ +G L L +                    VE    A K 
Sbjct: 146 AATSILNEASRLNPAFPPLFLARGVLSLLRASLHPPARAIRPGTVDTSERVESLRQALKC 205

Query: 154 VLEADR----DNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGA-IRLGIGLCRY 208
             E+ +     NV A+LG+A   +  GRY+++LE Y+  L   P+      R+GIG C +
Sbjct: 206 FDESAKAFGNRNVMAILGRARAHYMLGRYAEALEGYQEVLMKMPNMRDPDPRIGIGCCLW 265

Query: 209 KLGQLGKARQAFQRALQLDPENVEALVALAVMDL------QANEAA--GIRK--GMEKMQ 258
           +L    +A+ A+ RAL L+PE+  A + L    L        N+ +   I K    +  Q
Sbjct: 266 QLDFKEQAKSAWTRALALNPESKAANILLGAYYLYDSSRHATNDPSFGSIYKLAMTQYTQ 325

Query: 259 RAFEI---YPY-CAMALNYLANHFFFTGQHF-LVEQLTETALAVTNHGPTKSHSYYNLAR 313
           +A+++   YP  CAM   Y     F   +HF  VE L   A+ +T+     S  +Y LAR
Sbjct: 326 KAYKLDKEYPITCAMFGGY-----FLLRKHFPTVEALARKAIELTDVNAIASDGWYLLAR 380

Query: 314 SYHSKGDYEKAGLYYMASVKEINKPHEFIFP-YYGLGQVQLKLGDFRSALTNFEKVLEIY 372
             H +G+  KA  YY  S +      +   P  +G  Q+Q++ GD+  A    EK+++  
Sbjct: 381 KEHFEGEASKANEYYSRSDQARGGSDKGYLPAKFGAVQMQVQTGDYDGAKFRLEKIIQ-Q 439

Query: 373 PDNCETLKALGHIYVQLGQIEKAQEL-------LRKA---------------AKIDPRDA 410
             N E++  LG +  +     +A  L       LRKA                ++ P D 
Sbjct: 440 TKNPESMTLLGALLAEEVFAAEASPLKEDKSAELRKAISLLESVRASWKDEKKRLSP-DE 498

Query: 411 QAFIDLGEL-----------------------LISSDTGAALDAFKTARTLLKKAGEEVP 447
              + L  L                       +  +D    +D  +T   LL+   E + 
Sbjct: 499 SVLLYLARLYENNAPDKSMQCLQQVEQMQLGQIPDTDRPEDIDDEETMTNLLR---ENLS 555

Query: 448 IEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQL 507
            ++LNN+G   +   + E A   F+ AL        + S+ K    D  A +        
Sbjct: 556 PQLLNNMGCFLYHAEKVEQARHMFQTALN-----ACVKSREKDDTTDTDALV-------- 602

Query: 508 FHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAA 567
                             T+ +NLAR  E       A  +Y  +L ++ DY +A  RL  
Sbjct: 603 -----------------TTISYNLARTYEAASMPDEAKKVYEGLLERHSDYTEANARLTY 645

Query: 568 IAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDD------WVKAKETFRAASD 621
           IA       L     +E        P  ++ L +LE  N +      W  +K   R  + 
Sbjct: 646 IA-------LRQSPTDEG-------PKKMAKLYELESTNLEVRALFGWYLSKSKRRVTNI 691

Query: 622 ATDGK--------------DSYATLSLGNWNYFAALRNEKRAPKLEATH----LEKAKEL 663
           A D +              D Y+   +GN  Y  A R+ +R  + +        EKA E 
Sbjct: 692 AEDHEQRHYKHTLQGYDKHDRYSLTGMGNI-YLLAARDMRRDTEQDKEKRRKMYEKAVEF 750

Query: 664 YTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPD------VW 717
           + + +     N YAA G  + L      D  KD  T VQ      +F ++ D      V+
Sbjct: 751 FDKALQLDPKNAYAAQGIAIAL-----VDDRKDYTTAVQ------IFTRVRDTLRDASVY 799

Query: 718 INLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQ---------- 767
           +NL HVY     F  +++ Y+  L K   + D QIL  L R        +          
Sbjct: 800 LNLGHVYAELRQFTRSIENYEAALSKDRQH-DTQILACLGRVWLLKGMQEKSLAAMNTAL 858

Query: 768 DCKKSLLRAIHLAPSNYTLRFDAGVAMQKFS--ASTLQKTRRTADEVRSTVAELENAVRV 825
           DC +   RA  +AP    L F+      + +    +L +T++T  +V++    L+ A+  
Sbjct: 859 DCTQ---RARAIAPEQIHLEFNVAFVQNQIALLVISLPETQKTLRDVQAASKGLDEAIST 915

Query: 826 FSHLSAA 832
           F+ +S A
Sbjct: 916 FTQISKA 922


>gi|226294355|gb|EEH49775.1| tetratricopeptide repeat protein [Paracoccidioides brasiliensis
           Pb18]
          Length = 1247

 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 232/967 (23%), Positives = 387/967 (40%), Gaps = 210/967 (21%)

Query: 2   ACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQ 61
           + + IP    + EV ++L++LP D +++  +L  E+A  + W+IIA  Y KQ +++    
Sbjct: 30  SAIDIPASTFDSEVEISLEELPDDPTELCTLLDNEKAAKNFWVIIALAYAKQNQIDHAID 89

Query: 62  ILEEGSSPEIDEYYADVRYERIAILNALGVYYTYL----------GKIETKQREKEEHFI 111
           IL  G    +      +  E++ +L  +   Y             G++ ++ + K+ +  
Sbjct: 90  ILNRG----LSSLAQGMTKEKLGLLGWICWLYMLKARQAPRVALEGQLVSEAKTKDFYLQ 145

Query: 112 LATQYYNKASRIDMHEPSTWVGKGQLLLAKGE------------------VEQASSAFKI 153
            AT   N+ASR++   P  ++ +G L L +                    VE    A K 
Sbjct: 146 AATSILNEASRLNPAFPPLFLARGVLSLLRASLHPPARAIRPGTVDTSERVESLRQALKC 205

Query: 154 VLEADR----DNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGA-IRLGIGLCRY 208
             E+ +     NV A+LG+A   +  GRY+++LE Y+  L   P+      R+GIG C +
Sbjct: 206 FDESAKAFGNRNVMAILGRARAHYMLGRYAEALEGYQEVLMKMPNMRDPDPRIGIGCCLW 265

Query: 209 KLGQLGKARQAFQRALQLDPENVEALVALAVMDL------QANEAA--GIRK--GMEKMQ 258
           +L    +A+ A+ RAL L+PE+  A + L    L        N+ +   I K    +  Q
Sbjct: 266 QLDFKEQAKSAWTRALALNPESKAANILLGAYYLYDSSRHATNDPSFGSIYKLAMTQYTQ 325

Query: 259 RAFEI---YPY-CAMALNYLANHFFFTGQHF-LVEQLTETALAVTNHGPTKSHSYYNLAR 313
           +A+++   YP  CAM   Y     F   +HF  VE L   A+ +T+     S  +Y LAR
Sbjct: 326 KAYKLDKEYPITCAMFGGY-----FLLRKHFPTVEALARKAIELTDVNAIASDGWYLLAR 380

Query: 314 SYHSKGDYEKAGLYYMASVKEINKPHEFIFP-YYGLGQVQLKLGDFRSALTNFEKVLEIY 372
             H +G+  KA  YY  S +      +   P  +G  Q+Q++ GD+  A    EK+++  
Sbjct: 381 KEHFEGEASKANEYYSRSDQARGGSDKGYLPAKFGAVQMQVQTGDYDGAKFRLEKIIQ-Q 439

Query: 373 PDNCETLKALGHIYVQLGQIEKAQEL-------LRKA---------------AKIDPRDA 410
             N E++  LG +  +     +A  L       LRKA                ++ P D 
Sbjct: 440 TKNPESMTLLGALLAEEVFAAEASPLKEDKSAELRKAISLLESVRASWKDEKKRLSP-DE 498

Query: 411 QAFIDLGEL-----------------------LISSDTGAALDAFKTARTLLKKAGEEVP 447
              + L  L                       +  +D    +D  +T   LL+   E + 
Sbjct: 499 SVLLYLARLYENNAPDKSMQCLQQVEQMQLGQIPDTDRPEDIDDEETMTNLLR---ENLS 555

Query: 448 IEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQL 507
            ++LNN+G   +   + E A   F+ AL        + S+ K    D  A +        
Sbjct: 556 PQLLNNMGCFLYHAEKVEQARHMFQTALN-----ACVKSREKDDTTDTDALV-------- 602

Query: 508 FHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAA 567
                             T+ +NLAR  E       A  +Y  +L ++ DY +A  RL  
Sbjct: 603 -----------------TTISYNLARTYEAASMPDEAKKVYEGLLERHNDYTEANARLTY 645

Query: 568 IAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDD------WVKAKETFRAASD 621
           IA       L     +E        P  ++ L +LE  N +      W  +K   R  + 
Sbjct: 646 IA-------LRQSPTDEG-------PKKMAKLYELESTNLEVRALFGWYLSKSKRRVTNI 691

Query: 622 ATDGK--------------DSYATLSLGNWNYFAALRNEKRAPKLEATH----LEKAKEL 663
           A D +              D Y+   +GN  Y  A R+ +R  + +        EKA E 
Sbjct: 692 AEDHEQRHYKHTLQGYDKHDRYSLTGMGNI-YLLAARDMRRDTEQDKEKRRKMYEKAVEF 750

Query: 664 YTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPD------VW 717
           + + +     N YAA G  + L      D  KD  T VQ      +F ++ D      V+
Sbjct: 751 FDKALQLDPKNAYAAQGIAIAL-----VDDRKDYTTAVQ------IFTRVRDTLRDASVY 799

Query: 718 INLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQ---------- 767
           +NL HVY     F  +++ Y+  L K   + D QIL  L R        +          
Sbjct: 800 LNLGHVYAELRQFTRSIENYEAALSKDRQH-DTQILACLGRVWLLKGMQEKSLAAMNTAL 858

Query: 768 DCKKSLLRAIHLAPSNYTLRFDAGVAMQKFS--ASTLQKTRRTADEVRSTVAELENAVRV 825
           DC +   RA  +AP    L F+      + +    +L +T++T  +V++    L+ A+  
Sbjct: 859 DCTQ---RARAIAPEQIHLEFNVAFVQNQIALLVISLPETQKTLRDVQAASKGLDEAIST 915

Query: 826 FSHLSAA 832
           F+ +S A
Sbjct: 916 FTQISKA 922


>gi|115438446|ref|XP_001218068.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
 gi|114188883|gb|EAU30583.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
          Length = 1635

 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 243/1037 (23%), Positives = 422/1037 (40%), Gaps = 182/1037 (17%)

Query: 2    ACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQ 61
            + + IP    + EV V+L+ LP D +++  +L+ E+A  + W+IIA  Y KQ +++    
Sbjct: 492  SAIDIPASTLDSEVEVSLEGLPDDPTELCTLLENEKAAKNFWVIIALAYAKQKQIDHAID 551

Query: 62   ILEEGSSPEIDEYYADVRYERIAILNALGVYYTYL--------------GKIETKQREKE 107
            IL +G    +         E++ +L     +  +L              G++ T+ + K+
Sbjct: 552  ILNKG----LASVAHGATKEKLGLLG----WVCWLLMLKSRQAPRVAPEGELYTESKTKD 603

Query: 108  EHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-----------------VEQASSA 150
             +  LAT   N+ASR++   P  ++ +G L L +                   VE    A
Sbjct: 604  YYLQLATSTLNEASRLNPAFPPLFLARGVLSLLRASLHPPRPVRPGTVDTSERVESLRQA 663

Query: 151  FKIVLEADR----DNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGA-IRLGIGL 205
             K   E+ +     NV A+LG+A  ++  GRY+++LE Y++ L   P       R+GIG 
Sbjct: 664  LKCFDESSKAFGGRNVMAILGRARTQYMLGRYAEALEGYQKVLMRMPGLTDPDPRIGIGC 723

Query: 206  CRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDL-------QANEAAGIRKGM---E 255
            C ++LG   +A+ A++RAL L+P++  A + LAV  L         + A G    M   +
Sbjct: 724  CLWQLGFKEQAKVAWERALALNPDSKVANILLAVYYLYDSSRHATTDPAFGSLYKMAMTQ 783

Query: 256  KMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSY 315
              Q+AF++     M       +F     +  VE L   ++  T+     S  +Y L R  
Sbjct: 784  YTQKAFKLDKEYPMTCALFGGYFLLRKSYSTVETLARKSIENTDVMQIASDGWYLLGRKA 843

Query: 316  HSKGDYEKAGLYYMASVKEINKPHEFIFPY-YGLGQVQLKLGDFRSALTNFEKVLEIYPD 374
            H +GD  +A  +Y  S +      +   P  +G  Q+Q+   D   A    EK+++    
Sbjct: 844  HYEGDLPRAAEFYNRSDQARGGGDKGYLPAKFGAVQMQVSNKDLDGAKFRLEKIIQ-QTK 902

Query: 375  NCETLKALGHIYVQ--------------LGQIEKAQELLRK--------AAKIDP----- 407
            N E +  LG ++ +                +I+KA  L             KI P     
Sbjct: 903  NAECMILLGALHAEEVFAAQKSGSKEDKSAEIKKAISLFESVRALWKDDGKKISPDESVL 962

Query: 408  -------------RDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGE-EVPIEVLNN 453
                         +  Q  + L E+ ++                +K A    +P ++LNN
Sbjct: 963  VYLARLYEQTAPEKSMQCLVQLEEMQLAEIAADEYPEGIEDEEQIKDAMRVNLPPQLLNN 1022

Query: 454  IGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFEN 513
            +G   ++  + + A   F+ AL        + SK K   +D  A +              
Sbjct: 1023 MGCFMYQNEKMDLARSLFQTALK-----ACVRSKEKESDLDTDALV-------------- 1063

Query: 514  DGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARN 573
                        T+ +NL R  E       A  +Y  +L ++ DY +A  RL  IA    
Sbjct: 1064 -----------TTISYNLGRSYEASDMPDEAKKVYEGLLERHSDYTEANARLTYIA---- 1108

Query: 574  NLQLSIELVNEALKVNGKYPNALSMLGDLELKN-DDWVKAKETFRAASDATDGK------ 626
               L     +E  K   K   A S   +LE++    W  +K   RAA+ A D +      
Sbjct: 1109 ---LRQSPTDEGPKRMAKLYEADST--NLEVRALFGWYLSKSKKRAANLAEDHEQRHFKH 1163

Query: 627  --------DSYATLSLGNWNYFAA--LRNEKRAPKLEATHL-EKAKELYTRVIVQHTSNL 675
                    D Y+   +GN +   A  +R +    K +   + E+A E + + +     N 
Sbjct: 1164 TLQYYDKHDRYSLTGMGNVHLMTARDMRRDTDQDKEKRRKMYERAVEFFDKALQLDPRNA 1223

Query: 676  YAANGAGVVLA-EKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAM 734
            YAA G  + L  +K     +  +F+++++       ++   V++NL HVY     +  ++
Sbjct: 1224 YAAQGIAIALVDDKKDHGTAVHIFSKIRDT------LRDASVYLNLGHVYAELRQYTRSI 1277

Query: 735  KMYQNCLRKFYYNTDAQILLYLARTHY---EAEQWQDCKKSLL----RAIHLAPSNYTLR 787
            + Y+  L K     DAQIL  L R      + E      K+ L    RA  +AP+   L 
Sbjct: 1278 EHYETALSKDRAR-DAQILSCLGRVWLLKGKQEMSLSAMKTALDYAQRAHSVAPAQIHLE 1336

Query: 788  FDAGVAMQKFS--ASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASN-LHLHGFDEKK 844
            F+      + +  A +L +T++T  +V+     L  AV  F  L+ A N  +  G  E++
Sbjct: 1337 FNVAFVQNQIASLAYSLPETQKTVQDVQEAADGLRQAVETFGRLAQAKNPPYPAGALEQR 1396

Query: 845  INTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEAARQAAL--------AEEARRKAEEQ 896
             N      K L  A +  +E  E+   + +Q +EA              A+EA R  E +
Sbjct: 1397 ANMGKTIIKQLERALQSQKEYEEKNAAKLQQAREAREAEMRRREEEVRKAQEAER--ERK 1454

Query: 897  KKYLLEKRKLEDEQKRL 913
            +K   E++++ +E +RL
Sbjct: 1455 QKIAEERQQMIEEAQRL 1471


>gi|195586887|ref|XP_002083199.1| GD13607 [Drosophila simulans]
 gi|194195208|gb|EDX08784.1| GD13607 [Drosophila simulans]
          Length = 612

 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 112/338 (33%), Positives = 181/338 (53%), Gaps = 29/338 (8%)

Query: 584 EALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAA-SDATDGKDSYATLSLGNWNYFAA 642
           +AL +N   P+A S+LG+L L    +   ++ F     + +   D+Y+ ++LGN++    
Sbjct: 17  DALNINNDNPDARSLLGNLHLAKMQFALGQKNFETILKNPSTSTDAYSLIALGNFS-LQT 75

Query: 643 LRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQ 702
           L    R  + E  H EKA  ++ +V+     N++A NG G VLA KG    ++D+F QV+
Sbjct: 76  LHQPSRDKEKERKHQEKALAIFKQVLRNDPRNIWATNGIGAVLAHKGCVIEARDIFAQVR 135

Query: 703 EAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYE 762
           EA +        DVW+N+AHVY  Q  +  A++MY+NC++KFY + + +++ YLAR +  
Sbjct: 136 EATAD-----FCDVWLNIAHVYVEQKQYISAIQMYENCMKKFYKHNNVEVMQYLARAYLR 190

Query: 763 AEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENA 822
           A +  D K  LL+A  +AP +  L F+  V + + + + L   + T + V   V ELE A
Sbjct: 191 ANKLVDAKAVLLKARRVAPQDTVLLFNIAVVLSRLAMAILIDEKSTLEIVLQAVHELELA 250

Query: 823 -VRVFSHLSAASNLHLHGFDEKKINTHV-----EYCKHLLDAAKIHREAAER---EEQQN 873
             + F +LS      +HG D+ + N  V       C+ LL  A+ H   A R   EE+  
Sbjct: 251 QSKYFQYLS------VHG-DKNRFNIEVAGIEASTCQDLLSQAQYHVGRARRIDEEERSL 303

Query: 874 RQRQEAARQA---ALAEEARRKAEEQKKY---LLEKRK 905
           R++QE  R+A    +AE+ +R+ EE K     LL KR+
Sbjct: 304 RRKQEEEREAFKIKVAEQRKRREEEAKTSRDQLLAKRQ 341


>gi|262302943|gb|ACY44064.1| SH2 domain binding protein [Lynceus sp. 'Lyn']
          Length = 178

 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 75/178 (42%), Positives = 117/178 (65%)

Query: 147 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 206
           A + F  V     +N+PALLG+AC+ FN+  +  +L +YK+AL+ +P+CP  +RLG+G C
Sbjct: 1   ADAQFNFVFNQSPNNIPALLGKACISFNKKDFRGALAYYKKALRTNPNCPAGVRLGMGHC 60

Query: 207 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY 266
             KLG + KA+ AF+RAL+LDP+ V ALV LAV++L   ++  IR G++ + +A+ +   
Sbjct: 61  FLKLGSVDKAKLAFERALELDPKCVGALVGLAVLELNQQDSDSIRTGVQLLSKAYAVDAT 120

Query: 267 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 324
             M LN+LANHFFF  ++  V +L   A   T +   ++ S Y LAR++H +GDY++A
Sbjct: 121 IPMVLNHLANHFFFKKEYPKVMKLAMHAFQNTENEAMRAESCYQLARAFHVQGDYDQA 178



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 59/112 (52%), Gaps = 8/112 (7%)

Query: 357 DFRSALTNFEKVLEIYPDNCETLK-ALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFID 415
           DFR AL  ++K L   P+    ++  +GH +++LG ++KA+    +A ++DP+   A + 
Sbjct: 31  DFRGALAYYKKALRTNPNCPAGVRLGMGHCFLKLGSVDKAKLAFERALELDPKCVGALVG 90

Query: 416 LGELLISSDTGAALDAFKTARTLLKKA---GEEVPIEVLNNIGVIHFEKGEF 464
           L  L ++       D+ +T   LL KA      +P+ VLN++    F K E+
Sbjct: 91  LAVLELNQQDS---DSIRTGVQLLSKAYAVDATIPM-VLNHLANHFFFKKEY 138



 Score = 42.0 bits (97), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 33/88 (37%), Positives = 47/88 (53%), Gaps = 4/88 (4%)

Query: 96  LGKIETKQREKEEHFILATQYYNKASRIDMHEPS-TWVGKGQLLLAKGEVEQASSAFKIV 154
           LGK      +K+  F  A  YY KA R + + P+   +G G   L  G V++A  AF+  
Sbjct: 20  LGKACISFNKKD--FRGALAYYKKALRTNPNCPAGVRLGMGHCFLKLGSVDKAKLAFERA 77

Query: 155 LEADRDNVPALLGQACVEFNRGRYSDSL 182
           LE D   V AL+G A +E N+ + SDS+
Sbjct: 78  LELDPKCVGALVGLAVLELNQ-QDSDSI 104


>gi|225562205|gb|EEH10485.1| tetratricopeptide repeat domain-containing protein [Ajellomyces
           capsulatus G186AR]
          Length = 1244

 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 223/962 (23%), Positives = 381/962 (39%), Gaps = 200/962 (20%)

Query: 2   ACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQ 61
           + + IP    + EV ++L++LP D +++  +L  E+A  + W+IIA  Y KQ +++    
Sbjct: 29  SAIDIPASTFDSEVEISLEELPDDPTELCTLLDNEKAAKNFWVIIALAYAKQNQIDHAID 88

Query: 62  ILEEGSSPEIDEYYADVRYERIAILNALGVYYTYL----------GKIETKQREKEEHFI 111
           IL  G    +      V  E++ +L  +   Y             G++ ++ + K+ +  
Sbjct: 89  ILNRG----LSSLAQGVTKEKLGLLGWICWLYMRKSREAPRVAPGGQLVSEAKTKDYYLQ 144

Query: 112 LATQYYNKASRIDMHEPSTWVGKGQLLLAKGE------------------VEQASSAFKI 153
            AT   N+ASR++   PS ++ +G L + +                    VE    A K 
Sbjct: 145 AATSTLNEASRLNPAYPSLFLARGVLSILRASLQPPAKALRPGTVDTSERVETLRQALKC 204

Query: 154 VLEADRD----NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGA-IRLGIGLCRY 208
             E+ +     NV A+LG+A  ++  GRY+++LE Y+  L   P+      R+GIG C +
Sbjct: 205 FDESAKSFGNRNVMAILGRARAQYMLGRYAEALEGYQEVLIKMPNMRDPDPRIGIGCCLW 264

Query: 209 KLGQLGKARQAFQRALQLDPENVEALVALAVMDL------QANEAAG---IRKGMEK-MQ 258
           +L    +A+ A+ RAL L+PE+  A + L    L        N+ A     +  M +  Q
Sbjct: 265 QLDFKEQAKAAWTRALALNPESKVANILLGAYYLYDSSRHATNDPAFGSLYKIAMTQYTQ 324

Query: 259 RAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSK 318
           +AF++     M  +    +F        VE L   A+ +T+     S  +Y LAR  H +
Sbjct: 325 KAFKVDKEYPMTCSMFGGYFLLRKHFPTVEALARKAIELTDVNAIASDGWYLLARKEHFE 384

Query: 319 GDYEKAGLYYMASVKEINKPHEFIFP-YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCE 377
           G+  +A  YY  S +          P  +G  Q+Q++ GD+  A    EK+++    N E
Sbjct: 385 GNSARANEYYSRSDQARGGGDRGYLPAKFGAVQMQVRTGDYDGAKFRLEKIIQ-QTKNPE 443

Query: 378 TLKALGHIYVQ--------------LGQIEKAQELLRKA--------AKIDPRDAQAFID 415
           ++  LG ++ +                +++KA  LL            K+ P D    + 
Sbjct: 444 SMTLLGALFAEEVFAAQSSPLKEDKSAEVKKATSLLESVRASWKDEKKKLSP-DESVLLY 502

Query: 416 LGELLISSDTGAALDAFK-----------------------TARTLLKKAGEEVPIEVLN 452
           L  L  S     ++   +                       T   LL+   E +  ++LN
Sbjct: 503 LARLYESGSPEKSMQCLQHVEQMQLAQIPDTERPEDIEDEETTTNLLR---EHLAPQLLN 559

Query: 453 NIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFE 512
           N+G   +   + E A   F+ AL        + S+ +    D  A +             
Sbjct: 560 NMGCFLYHSEKIELARNMFQTALN-----ACVKSRDRDDSADTDALV------------- 601

Query: 513 NDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKAR 572
                        T+ +NLAR  E       A  +Y  +L ++ DY +A  RL  IA   
Sbjct: 602 ------------TTISYNLARTYEAASMPEEAKKVYEGLLERHSDYTEANARLTYIA--- 646

Query: 573 NNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDD------WVKAKETFRAASDATDGK 626
               L     +E        P  ++ L +LE  N +      W  +K   R A+ A D +
Sbjct: 647 ----LRQSPTDEG-------PKKMAKLYELESTNLEVRALFGWYLSKSKRRVANIAEDHE 695

Query: 627 --------------DSYATLSLGNWNYFAALRNEKRAPKLEATH----LEKAKELYTRVI 668
                         D Y+   +GN  Y  A R+ +R  + +        EKA E + + +
Sbjct: 696 QRHYKHTLQGYDKHDRYSLTGMGNI-YLLAARDMRRDTEQDREKRRKMYEKAVEFFDKAL 754

Query: 669 VQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPD------VWINLAH 722
                N YAA G  + L      D  KD  T VQ      +F ++ D      V++NL H
Sbjct: 755 QLDPKNAYAAQGIAIAL-----VDDRKDYTTAVQ------IFSRIRDTLRDASVYLNLGH 803

Query: 723 VYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQ----------DCKKS 772
           VY     F+ +++ Y+  L K     D QIL  L R        +          DC + 
Sbjct: 804 VYAELRQFSKSIENYEAALSKD-RQRDTQILACLGRVWLLKGMQEMNLVAMNTALDCTQ- 861

Query: 773 LLRAIHLAPSNYTLRFDAGVAMQKFS--ASTLQKTRRTADEVRSTVAELENAVRVFSHLS 830
             RA  +AP    L F+      + +    +L +T+++  +V+     L+ A+  FS ++
Sbjct: 862 --RARAIAPEQIHLEFNVAFVQNQIAQLVVSLPETQKSLQDVQIASDGLDEAINTFSQIA 919

Query: 831 AA 832
            A
Sbjct: 920 KA 921


>gi|189190482|ref|XP_001931580.1| tetratricopeptide repeat protein 1 [Pyrenophora tritici-repentis
           Pt-1C-BFP]
 gi|187973186|gb|EDU40685.1| tetratricopeptide repeat protein 1 [Pyrenophora tritici-repentis
           Pt-1C-BFP]
          Length = 1170

 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 229/941 (24%), Positives = 387/941 (41%), Gaps = 183/941 (19%)

Query: 14  EVRVALD-QLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQILEEGSSPEID 72
           +V + LD Q+  D +++ DIL+AE++    W+ +A  Y K  +++    +L++ +    +
Sbjct: 44  DVEIPLDDQIQDDPTELCDILEAEKSATSTWVQVAVAYAKHKRIDTAIDVLKQATG-VFN 102

Query: 73  EYYADVRYERIAILNALGVYYTYLGKIETKQREKE------EHFIL--ATQYYNKASRID 124
             +++VR   ++ILN  G+ + YL K     R K       + F +  AT   N ASRI 
Sbjct: 103 RAHSEVR---LSILN--GLCWLYLQKCREAPRVKPHGDTKLKDFWIQSATGVLNDASRIS 157

Query: 125 MHEPSTWVGKGQLLLAKGEVE-------------------QASSAFKIVLEADRD-NVPA 164
              P  ++ +G L L K  ++                   QA+  F+  L A    N+ A
Sbjct: 158 PSHPPLFLARGVLYLLKASLQGPATAAGSTVSPERMETLKQAAKCFEDALRASGGRNLMA 217

Query: 165 LLGQACVEFNRGRYSDSLEFYKRALQVHPSC--PGAIRLGIGLCRYKLGQLGKARQAFQR 222
            +G+A V ++ G+++D+L+ Y+  L+  P    P   R+GIG C ++LG   +A  A+QR
Sbjct: 218 KMGKARVNYSMGKWADALKGYQNILESSPDLLDPDP-RIGIGCCFWQLGHKDEAATAWQR 276

Query: 223 ALQLDPENVEALVALAVMDLQANE---------AAGIRKGM-EKMQRAFEI---YPY-CA 268
           +L+L+P++  AL+ L + + Q            AA I+K   E +Q A ++   YP  CA
Sbjct: 277 SLELNPKSKIALILLGIYNFQLTANLSTADPKFAALIKKATGEYIQPALKLDNQYPLSCA 336

Query: 269 MALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYY 328
               YL             E +   A+ +T+     S  +Y  A+  H + +   A  YY
Sbjct: 337 TVGTYL----ILRKDLGKTEDVARRAIELTDTNAIASDGWYLRAKIAHQQENTTLAAEYY 392

Query: 329 MASVKEINKPHEFIFP-YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYV 387
             S +          P  +GL Q+ + + ++  A    EK+L+  P N E    LG +Y 
Sbjct: 393 SKSDQARGGEERGYIPAKFGLAQMNVLMSNYDGAKFRLEKILQQSP-NVEAQTLLGTLYA 451

Query: 388 Q---LGQIEKAQE----LLRKAAKI---------DPR-----DAQAFIDLGELLISSDTG 426
           +     Q  K+ E     LRKA K          DP+     D    ++L  L  +    
Sbjct: 452 EDVFAAQNSKSTEDKSAELRKALKYLESVQNAWKDPKKKVIPDQSVLLNLARLYETDHPE 511

Query: 427 AALDAFKTARTL-LKKAGEEVPIEVL-------------------NNIGVIHFEKGEFES 466
            +L   +    + +    EE   E L                   NN+G   F+   +  
Sbjct: 512 KSLKCLEEVEQMEIDAIPEEDYPEGLEEGAELKAALRQLLPPQLLNNMGCFQFQAERYVR 571

Query: 467 AHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVT 526
           A + F+ AL        ++++ +   ID  A +                          +
Sbjct: 572 AQELFQVALN-----ACVNAENRDNTIDTDALV-------------------------TS 601

Query: 527 VLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEAL 586
           + FNLAR  E   +   A  +Y  +L ++ DYVDA +RL  IA   +        + +  
Sbjct: 602 ISFNLARTYEAEGEPEEAKKVYNSLLQRHPDYVDARIRLTYIALKEHPQDEGPRAMKDLF 661

Query: 587 KVNGKYPNALSMLGDLELKNDDWVKAKETFRA---ASD-----------ATDGKDSYATL 632
           K N       ++ G        W   K   R    A+D            +D  D Y+ +
Sbjct: 662 KENEDNVEVRALYG--------WYVNKSKKRTQNFAADEEQRLYKHTLQKSDKHDRYSLM 713

Query: 633 SLGNWNYFAALRNEKRAPKLEATH----LEKAKELYTRVIVQHTSNLYAANGAGVVLAE- 687
            +GN  + A  R   R+ + +        E+A E + +V+     N YAA G  + L E 
Sbjct: 714 GMGNI-HLAIAREMPRSSEQDKEKRRKGYERAVEFFDKVLQLDPKNAYAAQGIAIALVED 772

Query: 688 KGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYN 747
           K  +  +  +FT+V+E       ++   V++NL H Y     +A A++ Y+  L K  +N
Sbjct: 773 KKDYSTALQIFTKVKET------LKDHSVYVNLGHTYCEIKQYARAIENYEAALSKNQHN 826

Query: 748 TDAQILLYLARTHYEAEQWQ----------DCKKSLLRAIHLAPSNYTLRFDAGVAMQKF 797
            + +IL  L RT Y   + +          D  K  L+A   APS+   +F+  VA  +F
Sbjct: 827 -NPKILACLGRTWYLRARHERSVAGIRTALDYSKQALKA---APSDLNSQFN--VAFVQF 880

Query: 798 SAST----LQKTRRTADEVRSTVAELENAVRVFSHLSAASN 834
             +T    L + +RT  EV      L  A+     L+   N
Sbjct: 881 QIATMVYSLPEQQRTLQEVDEAATGLTEAIEALEKLAKEEN 921


>gi|303319151|ref|XP_003069575.1| TPR Domain containing protein [Coccidioides posadasii C735 delta
           SOWgp]
 gi|240109261|gb|EER27430.1| TPR Domain containing protein [Coccidioides posadasii C735 delta
           SOWgp]
 gi|320041022|gb|EFW22955.1| tetratricopeptide repeat protein 1 [Coccidioides posadasii str.
           Silveira]
          Length = 1210

 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 227/958 (23%), Positives = 386/958 (40%), Gaps = 188/958 (19%)

Query: 2   ACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQ 61
           + + IP  + + EV ++L++LP D +++  +L  EQA  + W+II+  Y K  +++   +
Sbjct: 34  SAIDIPASSFDTEVEISLEELPEDPTELCTLLDNEQATKNFWVIISLAYAKHNQLDLAIE 93

Query: 62  ILEEGSSPEIDEYYADVRYERIAILNALGVYYTYL------------GKIETKQREKEEH 109
           IL  G    I         E++ +LN   + + YL            G++ ++ R K+ +
Sbjct: 94  ILNRG----IASLSHGASVEKLGLLN--WICWLYLLKSRQAPRVAPEGQLLSEARTKDYY 147

Query: 110 FILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE------------------VEQASSAF 151
              AT   N+A+R++   P  ++ +G L L +                    VE    A 
Sbjct: 148 LQAATATLNEATRMNPAFPPLFLARGVLSLLRASLQPPAKPIRPGTVDTSERVESLRQAL 207

Query: 152 KIVLEADR----DNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGA-IRLGIGLC 206
           K   E+ +     NV A+LG+A  ++  GRY+++LE Y+  L   P+      R+GIG C
Sbjct: 208 KCFDESSKALGNRNVMAILGRARAQYMLGRYAEALEGYQDVLMKMPNMTDPDPRIGIGCC 267

Query: 207 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDL-------QANEAAG--IRKGMEK- 256
            ++L    +A+ A+ RAL L+P +  A + LA   L         + A G   +  M + 
Sbjct: 268 LWQLDFKDQAKAAWNRALALNPNSKVANILLAAYYLYDSSRHATTDPAFGSLYKLAMTQY 327

Query: 257 MQRAFEI---YPY-CAMALNYLANHFFFTGQHF-LVEQLTETALAVTNHGPTKSHSYYNL 311
            Q+AF++   YP  C M   Y     F   +HF  VE L   A+ +T+     S  +Y L
Sbjct: 328 TQKAFKLDKEYPLTCTMFGGY-----FLLRRHFPTVEALARKAIELTDVNAIASDGWYLL 382

Query: 312 ARSYHSKGDYEKAGLYYMASVKEINKPHEFIFP-YYGLGQVQLKLGDFRSALTNFEKVLE 370
           AR  H +GD  KA  YY  S +      +   P  +G  Q+Q+K  D   A    EK+ +
Sbjct: 383 ARKEHEEGDPSKAQEYYNRSDQARGGSDKGYLPAKFGAVQMQIKAHDKDGAKFRLEKIFQ 442

Query: 371 IYPDNCETLKALGHIYVQ--------------LGQIEKAQELLR--------KAAKIDPR 408
               N E +  LG +Y +                +I+KA  LL         +  KI P 
Sbjct: 443 -QKKNPEAMTLLGSLYAEEIFEALASGNKEDKSTEIKKAIGLLEAVRASWKDEKKKISP- 500

Query: 409 DAQAFIDLGELLISSDTGAAL--------------------DAFKTARTLLKKAGEEVPI 448
           D    + L  L  +S    ++                    D  +   T+     E +  
Sbjct: 501 DISVLLYLARLYETSAPEKSMQCLSQIEQIQLAQIPQEDRPDNVEDEETMTNILRERLAP 560

Query: 449 EVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLF 508
           ++LNN+G   ++  + E A   F+ AL   +     D  T T  +               
Sbjct: 561 QLLNNMGCFFYQADKIEQARNMFQTALNACVKTQEKDDGTDTDAL--------------- 605

Query: 509 HRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAI 568
                            T+ +NL R  E       A  +Y+ +L ++ DY +A  RL  +
Sbjct: 606 ---------------VTTISYNLGRTYETAGMPEEAEKVYKGLLERHSDYTEANARLTYM 650

Query: 569 AKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDD------WVKAKETFRAASDA 622
           A       L     +E        P  ++ L + E  N +      W   K   R A+ A
Sbjct: 651 A-------LRQSPTDEG-------PKKMAKLYEAEATNLEVRALFGWYLNKSKRRTANIA 696

Query: 623 TDGK--------------DSYATLSLGNWNYFAA--LRNEKRAPKLEATHL-EKAKELYT 665
            D +              D Y+  ++GN +   A  +R +    + +   + E+A E + 
Sbjct: 697 EDHEQRHHKHTLQGYDKHDRYSLTAMGNIHLMVARDMRRDGEQDREKRRKVYERAVEFFD 756

Query: 666 RVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYF 725
           + +     N YAA G  + L      D  KD  + VQ  +     ++   V++NL HV+ 
Sbjct: 757 KALQLDPKNAYAAQGIAIAL-----VDDRKDYASAVQVFSKVRDSIRDASVYLNLGHVFA 811

Query: 726 AQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLL-------RAIH 778
               F+ +++ Y+  L K     D QIL  L R  +   + +    S+        RA  
Sbjct: 812 ELRQFSKSIENYEIALSKDRAK-DPQILSCLGRVWFLKGKQERSITSMRTALEYAERARA 870

Query: 779 LAPSNYTLRFDAGVAMQKFS--ASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASN 834
           +AP    L F+      + +  AS L +T++T+ E+   ++ L+ AV  F  ++ A N
Sbjct: 871 VAPEQKHLDFNIAFVQNEIAHLASNLPETQKTSQEIEEALSGLDEAVVTFEKIAKAPN 928


>gi|262302909|gb|ACY44047.1| SH2 domain binding protein [Daphnia magna]
          Length = 178

 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 76/178 (42%), Positives = 114/178 (64%)

Query: 147 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 206
           A + F  VL    DN+P+LLG+AC+ FN+  Y  +L +YK+AL+ + +CP  +RLG+G C
Sbjct: 1   ADAQFNFVLNQSPDNIPSLLGKACISFNKKDYKAALAYYKKALRTNATCPAGVRLGMGHC 60

Query: 207 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY 266
             KLG   KAR AF+RAL LDP+ V ALV +A+++L   E+  IR G++ + RA+ +   
Sbjct: 61  FLKLGNAEKARLAFERALDLDPKCVGALVGMAILELNLQESDSIRNGVQLLSRAYAVDSS 120

Query: 267 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 324
             M LN+LANHFFF   +  V+ L   A   T +   ++ S Y +AR++H +GDY++A
Sbjct: 121 NPMVLNHLANHFFFKKDYSKVQHLALHAFHNTENEAMRAESCYQMARAFHVQGDYDQA 178


>gi|157939611|gb|ABW05530.1| SH2 domain binding protein [Triops longicaudatus]
          Length = 177

 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 77/177 (43%), Positives = 114/177 (64%)

Query: 147 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 206
           A + F  VL    +N+P+LLG+AC+ FN+  Y  +L FYK+AL+ + +CP  +RLG+G C
Sbjct: 1   ADAQFTFVLNQSPNNIPSLLGKACISFNKKDYRGALAFYKKALRTNANCPAGVRLGMGHC 60

Query: 207 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY 266
             KLG   KAR AF+RAL+LDP+ V ALV LA+++L   E   IRKG++++ +A+ I   
Sbjct: 61  FIKLGNQEKARLAFERALELDPQCVGALVGLAILELNMQEGEAIRKGVQRLSKAYTIDST 120

Query: 267 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEK 323
             M LN+LANHFFF   +  V+ L   A   T +   ++ S Y LAR++H + DY++
Sbjct: 121 NPMVLNHLANHFFFKKDYAKVQHLALHAFHNTENEAMRAESCYQLARAFHVQHDYDQ 177


>gi|68471165|ref|XP_720359.1| hypothetical protein CaO19.7067 [Candida albicans SC5314]
 gi|77022482|ref|XP_888685.1| hypothetical protein CaO19_7067 [Candida albicans SC5314]
 gi|46442223|gb|EAL01514.1| hypothetical protein CaO19.7067 [Candida albicans SC5314]
 gi|76573498|dbj|BAE44582.1| hypothetical protein [Candida albicans]
          Length = 1091

 Score =  159 bits (402), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 232/981 (23%), Positives = 416/981 (42%), Gaps = 133/981 (13%)

Query: 20  DQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQILEEGSSPEIDEYYADVR 79
           ++L  D S+++  L  +Q     W+I A  Y K GK+++  + +   ++ ++D +  + +
Sbjct: 38  NELSDDPSELIQFLTDQQTEKQYWIIAASGYAKLGKLKESLEFI--NAALKLDYFNENDK 95

Query: 80  YERIAILNALGVYYTYLG--KIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQL 137
               + +  L V   YLG  K       K+E   L  +    +        S  +    L
Sbjct: 96  KSFESFIIWLLVKNVYLGIDKDNNLNLAKKEISKLNFKIQTDSETSTSISTSNLLSSAIL 155

Query: 138 LLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGR-YSDSLEFYKRALQVHPSCP 196
            L + + + A   F  +L  D +N  ALLG+A    N+ + YS +L+ Y++ L ++P   
Sbjct: 156 YLYESKDDDAIDIFDRILRIDPNNCFALLGKAQSVLNKTKNYSHALKLYQQVLILNPLMK 215

Query: 197 GAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGI------ 250
              RLGIGLC + L     A QA++R+LQLDP NV++ + L +          +      
Sbjct: 216 PDPRLGIGLCFWFLKDDKMAIQAWERSLQLDPTNVKSRIFLNLAKFHTTFTNSLSDEEFL 275

Query: 251 ---RKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETAL-AVTNHGPTKSH 306
              +  ++++ +   +          L ++ F  G +  V ++ E  +  +T     K  
Sbjct: 276 DNYKNCLQELSKLKSLNANDTTVTLALCSYLFSKGDYNTVIKIVEKIVKGITGSDNLKKF 335

Query: 307 SYYN----------------LARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQ 350
           S ++                LAR   ++G++ ++  Y+  ++K +N+ +  I    GLGQ
Sbjct: 336 STFSRITKYESNALSQCATWLARIEFARGNFTQSSKYFQEAIK-LNETN--IVAKLGLGQ 392

Query: 351 VQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKI-- 405
            Q   G    A   FE +L       E   +LG +Y +     K   A ++L +  ++  
Sbjct: 393 SQYNRGSIEEASLTFESILRSNVKCLEVNYSLGVLYSKQNSRSKKELAIQVLERYIRLSN 452

Query: 406 ---------------DPRDAQAFIDLGELL-ISSDTGAALDAFKTARTLLKKAGEEVPIE 449
                          +P    A++ L +L     D   AL     A    ++  ++VP+E
Sbjct: 453 NRGLSSNEEEFVLNKEPVALNAYLILSQLYEAKGDMTQALTYLNKAVEARRQVEKDVPLE 512

Query: 450 VLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFH 509
           V NNIGV  F K  ++SA ++F  ALG       LD +              FK      
Sbjct: 513 VYNNIGVFQFTKQNYDSALENFTTALGK------LDGR-------------DFKSP---- 549

Query: 510 RFENDGNH-VELPWN-KVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRL-- 565
               DG+  V+LP + + ++ +NLAR  ++I +   A   Y  +L +   Y  A LR+  
Sbjct: 550 ----DGDTLVDLPQDLRTSLTYNLART-KEISNQKDALETYEQLLTECPHYFSAKLRILF 604

Query: 566 -----AAIAK--ARNNLQLSIELVNEALKVNGKYPNALSMLGD-LELKND-DWVKAKETF 616
                  I K   R+ ++  ++L    L+V   Y   +   G  L + +D D    K+T 
Sbjct: 605 LNCITEGITKEEIRDEIESLLDLNASDLEVRSFYGWFIKNFGKKLHMPSDADTKLQKDTL 664

Query: 617 RAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLY 676
                  D  D YA +SL N  Y    R+ K A + +  +  +A EL+T+V+   + N+Y
Sbjct: 665 VEF----DSHDCYALISLANI-YCIMARDTKGADEKKKKYYLRAIELFTKVLSLDSKNVY 719

Query: 677 AANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKM 736
           AA G  +   E  Q +   D+  +++++ +         V++NL HV      F  A++ 
Sbjct: 720 AAQGLAITYIENKQLNKGLDILRKIRDSLND------ISVYLNLGHVLCDLKQFGKAIEN 773

Query: 737 YQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQK 796
           Y+  L ++    DA+IL +L R  Y     +     L +A+  A +          A   
Sbjct: 774 YELALTRYTDGKDAKILSFLGRVWYLRGNAESSLPYLKKALGYAQAALDAARSTSTAALA 833

Query: 797 FSASTLQ-----------KTRRTADEVRSTVAELENAVRVFSHLSAASNLH-------LH 838
           F+ S +Q              R  +++ S +  L  A+ + + L++    H       L 
Sbjct: 834 FNISFVQFQIADFITKQPVNERNIEDIESAIEGLNKAIDILTQLASDEEKHPPYPREELR 893

Query: 839 GFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEAARQAALAEE-ARRKAEEQK 897
           G      +T +    + L+  K +   AE EE     + + A+Q  L EE AR K EE++
Sbjct: 894 GRANLGTSTLLSRLANALEETKENN--AEIEE-----KIQKAKQIRLDEEQARLKEEEER 946

Query: 898 KYLLEKRKLEDEQKRLRQQEE 918
              L++++LE  ++R+  QE+
Sbjct: 947 LNKLKEKELEMSKQRMLLQEQ 967


>gi|238883226|gb|EEQ46864.1| conserved hypothetical protein [Candida albicans WO-1]
          Length = 1091

 Score =  159 bits (402), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 233/981 (23%), Positives = 414/981 (42%), Gaps = 133/981 (13%)

Query: 20  DQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQILEEGSSPEIDEYYADVR 79
           ++L  D S+++  L  +Q+    W+I A  Y K GK+++  + +   S  ++D +  + +
Sbjct: 38  NELSDDPSELIQFLTDQQSEKQYWIIAASGYAKLGKLKESLEFINAAS--KLDYFNENDK 95

Query: 80  YERIAILNALGVYYTYLG--KIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQL 137
               + +  L V   YLG  K       K+E   L  +    +        S  +    L
Sbjct: 96  KSFESFIIWLLVKNVYLGIDKDNNLNLAKKEISKLNFKIQTDSETSTSISTSNLLSSAIL 155

Query: 138 LLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGR-YSDSLEFYKRALQVHPSCP 196
            L + + + A   F  +L  D +N  ALLG+A    N+ + YS +L+ Y++ L ++P   
Sbjct: 156 YLYESKDDDAIDIFDRILRIDPNNCFALLGKAQSVLNKTKNYSHALKLYQQVLILNPLMK 215

Query: 197 GAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGI------ 250
              RLGIGLC + L     A QA++R+LQLDP NV++ + L +          +      
Sbjct: 216 PDPRLGIGLCFWFLKDDKMAIQAWERSLQLDPTNVKSRIFLNLAKFHTTFTNSLSDEEFL 275

Query: 251 ---RKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETAL-AVTNHGPTKSH 306
              +  ++++ +   +          L ++ F  G +  V ++ E  +  +T     K  
Sbjct: 276 DNYKNCLQELSKLKSLNANDTTVTLALCSYLFSKGDYDTVIKIVEKIVKGITGSDNLKKF 335

Query: 307 SYYN----------------LARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQ 350
           S ++                LAR   ++G++ ++  Y+  ++K +N+ +  I    GLGQ
Sbjct: 336 STFSRITKYESNALSQCATWLARIEFARGNFTQSSKYFQEAIK-LNETN--IVAKLGLGQ 392

Query: 351 VQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKI-- 405
            Q   G    A   FE +L       E   +LG +Y +     K   A ++L +  ++  
Sbjct: 393 SQYNRGSIEEASLTFESILRSNVKCLEVNYSLGVLYSKQNSRSKKELAIQVLERYIRLSN 452

Query: 406 ---------------DPRDAQAFIDLGELL-ISSDTGAALDAFKTARTLLKKAGEEVPIE 449
                          +P    A++ L +L     D   AL     A    ++  ++VP+E
Sbjct: 453 NRGLSSNEEEFVLNKEPVALNAYLILSQLYEAKGDMTQALTYLNKAVEARRQVEKDVPLE 512

Query: 450 VLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFH 509
           V NNIGV  F K  ++SA ++F  ALG       LD +              FK      
Sbjct: 513 VYNNIGVFQFTKQNYDSALENFTTALGK------LDGR-------------DFKSP---- 549

Query: 510 RFENDGNH-VELPWN-KVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRL-- 565
               DG+  V+LP + + ++ +NLAR  E I +   A   Y  +L +   Y  A LR+  
Sbjct: 550 ----DGDTLVDLPQDLRTSLTYNLARTKE-ISNQKDALETYEQLLTECPHYFSAKLRILF 604

Query: 566 -----AAIAKA--RNNLQLSIELVNEALKVNGKYPNALSMLGD-LELKND-DWVKAKETF 616
                  I K   R+ ++  ++L    L+V   Y   +   G  L + +D D    K+T 
Sbjct: 605 LNCITEGITKEEIRDEIESLLDLNASDLEVRSFYGWFIKNFGKKLHMPSDADTKLQKDTL 664

Query: 617 RAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLY 676
                  D  D YA +SL N  Y    R+ K A + +  +  +A EL+T+V+   + N+Y
Sbjct: 665 VEF----DSHDCYALISLANI-YCIMARDAKGADEKKKKYYLRAIELFTKVLSLDSKNVY 719

Query: 677 AANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKM 736
           AA G  +   E  Q +   D+  +++++ +         V++NL HV      F  A++ 
Sbjct: 720 AAQGLAITYIENKQLNKGLDILRKIRDSLND------ISVYLNLGHVLCDLKQFGKAIEN 773

Query: 737 YQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQK 796
           Y+  L ++    DA+IL +L R  Y     +     L +A+    +          A   
Sbjct: 774 YELALTRYTDGKDAKILSFLGRVWYLRGNAESSLPYLKKALGYTQAALDAARSTSTAALA 833

Query: 797 FSASTLQ-----------KTRRTADEVRSTVAELENAVRVFSHLSAASNLH-------LH 838
           F+ S +Q              R  +++ S +  L  A+ + + L++    H       L 
Sbjct: 834 FNISFVQFQIADFITKQPVNERNVEDIESAIEGLNKAIDILTQLASDEEKHPPYPREELR 893

Query: 839 GFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEAARQAALAEE-ARRKAEEQK 897
           G      +T +    + L+  K +   AE EE     + + A+Q  L EE AR K EE++
Sbjct: 894 GRANLGTSTLLSRLANALEETKENN--AEIEE-----KIQKAKQIRLEEEQARLKEEEER 946

Query: 898 KYLLEKRKLEDEQKRLRQQEE 918
              L++++LE  ++R+  QE+
Sbjct: 947 LNKLKEKELEMSKQRMLLQEQ 967


>gi|310789513|gb|EFQ25046.1| tetratricopeptide [Glomerella graminicola M1.001]
          Length = 1201

 Score =  159 bits (401), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 244/1049 (23%), Positives = 430/1049 (40%), Gaps = 206/1049 (19%)

Query: 2    ACVYIPVQNSEEEVRVALD--QLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQF 59
            A + +PVQ   E+  V +D  +L  D +++  + + E+A    W+ +A  Y KQ K++  
Sbjct: 29   AAIDVPVQGEAEDEAVEIDLLELFDDPTELCTLFENERAARTYWMTVALAYAKQKKIDHA 88

Query: 60   RQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYL----------GKIETKQREKEEH 109
             ++L  G +   D    +   E+++++  L   Y +           G++ ++ + KE +
Sbjct: 89   IEMLVRGGNAMRD----NNPREKLSMIGCLCWMYLWKSREAPRVPPDGELASEAKTKEYY 144

Query: 110  FILATQYYNKASRIDMHEPSTWVGKG--QLLLAKGEVEQAS--------------SAFKI 153
              LAT   N ASRI+   P  ++ +G  QLL A  +  +A+              SA K 
Sbjct: 145  LQLATSTLNDASRINPAFPPLFLARGVLQLLRASLQTPKATGHGQVDSEKADLLRSALKA 204

Query: 154  VLEADR----DNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS-CPGAIRLGIGLCRY 208
              +A R     N+ A++G+A   F+ G+Y +SL  Y+  LQ  P       R+GIG C +
Sbjct: 205  FEDAVRVSQGKNMLAVMGKARTFFSLGKYPESLACYQEVLQKMPDFVDPDPRIGIGCCFW 264

Query: 209  KLGQLGKARQAFQRALQLDPENVEALVALAVMDLQA------NEAAGIR---KGM-EKMQ 258
            +LG    A+ A++R L+++P++    + L +  L A      N    +R   K M E  Q
Sbjct: 265  QLGFKDDAKLAWERCLEINPDHKVGNILLGLYYLDASGHIPTNSPDFLRLYKKAMTEYTQ 324

Query: 259  RAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSK 318
            ++F++     +     A +F    Q   V+ L   A+  T+     S  +Y LAR  H  
Sbjct: 325  KSFKLDKNMPLTCATFAGYFLSRKQLSTVDSLAHKAIQYTDVNAIASDGWYLLARKEHYT 384

Query: 319  GDYEKAGLYYMASVKEINKPHEFIFP-YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCE 377
            GD ++A  +Y  + +          P  +G  Q+ +  GD   A    EK+++    N E
Sbjct: 385  GDPDRASDFYRRADEARGGAERGYLPAKFGAAQLAVLRGDLGEAKLRLEKMIQ-QSKNHE 443

Query: 378  TLKALGHIYVQL--------GQIEKAQEL---------LRKAAKIDPR----DAQAFIDL 416
             +  LG +Y +         G+ +K+ E+         +R A K   +    DA   ++L
Sbjct: 444  AMILLGTLYAEEVFANEEADGKEDKSAEMKKAISLLESVRGAWKDSKKGMSPDAAVLLNL 503

Query: 417  GEL-----------------------LISSDTGAALDAFKTARTLLKKAGEEVPIEVLNN 453
              L                       +   D  A +      R  L+K    +P ++LNN
Sbjct: 504  ARLYEHEYPERAQQCLLQVEQLELDQIPEDDHPADITDEAEKRAALRKF---LPPQLLNN 560

Query: 454  IGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFEN 513
            IG  + +  + E A + F+ ALG  + +   D +     ID  A +              
Sbjct: 561  IGCFYSQSEKHEQASEMFEAALGACMKIGEKDQE-----IDTDALV-------------- 601

Query: 514  DGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARN 573
                        T+ FNL R  E       AS +Y  +L ++ DY DA  RLA I K R 
Sbjct: 602  -----------TTISFNLGRSYESQGLYDKASEVYEGLLKRHDDYTDARTRLAYI-KLRK 649

Query: 574  NLQLSIELVNEALKVNGKYPNALSML-----GDLEL--------------KNDDWVKAKE 614
            N              N + P+A+S L      DLE+              K    +    
Sbjct: 650  N-------------PNKEGPDAVSKLYQENPQDLEVRALYGWYMGKVHSRKRPQNINEDH 696

Query: 615  TFRAASDAT---DGKDSYATLSLGNWNYFAA--LRNEKRAPKLE-ATHLEKAKELYTRVI 668
             FR         D  D YA + +GN     A  +R E  + K + +    KA E + + +
Sbjct: 697  EFRHYKHTLQNYDKHDRYALVGMGNLYLIQAREMRRESDSDKAKRSATYSKAVEFFEKAL 756

Query: 669  VQHTSNLYAANGAGVVLAE-KGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQ 727
                 N YAA G  + L E K  +  +  +F ++++       ++   V++NL H+Y   
Sbjct: 757  SLDPKNAYAAQGIAIALVEDKKDYKTALSIFVKIRDT------IKEAHVYVNLGHIYAEL 810

Query: 728  GNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEA-------EQWQDCKKSLLRAIHLA 780
              ++ A++ Y+  L K     D  IL  L RT           + + +  K   +A+  A
Sbjct: 811  RQYSKAIENYEVALSKEGKANDPVILACLGRTWLNKGRSEKLLDAYHEALKYAQKALEAA 870

Query: 781  PSNYTLRFDAGVAMQKFSAST--LQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLH 838
            P     +F+      + + +   L + +RT  +++     LE+A+               
Sbjct: 871  PEQVHYKFNVAFVQIQMATTVYGLNENQRTLAQLQEAATGLESAI--------------S 916

Query: 839  GFDEKKINTHVEYCKHLLD-----AAKIHREAAER---EEQQNRQRQEAARQAALAE--- 887
              DE   +    Y KH ++     A    R+  ER    +++  ++ +   QAAL +   
Sbjct: 917  ALDEIANHPQTPYPKHDVEQRANMARNTQRKQLERAIASQKEYEEKNKEKLQAALEQRQI 976

Query: 888  EARRKAEEQKKYLLEKRKLEDEQKRLRQQ 916
            E R++ EE++K L ++R+ +++ +R R++
Sbjct: 977  ELRKREEERQKALEKERERQEKIRREREE 1005


>gi|315048619|ref|XP_003173684.1| hypothetical protein MGYG_09033 [Arthroderma gypseum CBS 118893]
 gi|311341651|gb|EFR00854.1| hypothetical protein MGYG_09033 [Arthroderma gypseum CBS 118893]
          Length = 1194

 Score =  159 bits (401), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 220/926 (23%), Positives = 386/926 (41%), Gaps = 133/926 (14%)

Query: 2   ACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQ 61
           + + IP    + EV ++L +LP D +++  +L  E+A  + W+IIA  Y KQ +++   +
Sbjct: 32  SAIDIPASTFDSEVEISLQELPDDPTELCTLLDNEKAAKNFWVIIALAYAKQKQIDHAIE 91

Query: 62  ILEEGSSPEIDEYYADVRYERIAILNALGVYYTYL------------GKIETKQREKEEH 109
           IL  G    +         ER+++L    + + YL            G++ ++ + KE +
Sbjct: 92  ILTRG----LASLAHGATKERLSLLG--WICWLYLIKSRQAPRVAPEGQLHSEAKTKEFY 145

Query: 110 FILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE------------------VEQASSAF 151
              AT   N+ASR++   P  ++ +G L + +                    VE    A 
Sbjct: 146 LQAATATLNEASRLNPAFPPLFLARGVLSILRASLQPPSKPVRPGTIDTSERVESLQQAI 205

Query: 152 KIVLEADR----DNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGA-IRLGIGLC 206
           K   E+ +     N+ A+LG+A   +  GRY D+LE Y+ AL   PS      R+GIG C
Sbjct: 206 KCFDESAKAFGGRNIMAILGRARANYMLGRYGDALEGYQEALVKMPSMRDPDPRIGIGCC 265

Query: 207 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANE---------AAGIRKGMEK- 256
            ++L    +A+ A+ RAL L+P++  A + LA   L  +          ++  +  M + 
Sbjct: 266 LWQLDFKDQAKVAWNRALSLNPDSKAANILLAAYYLHDSSRHSTNDPEFSSLYKTAMTQY 325

Query: 257 MQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYH 316
            Q+AF++     M      ++F        VE L   A+ +T+     S  +Y LAR  H
Sbjct: 326 TQKAFKLDKEYPMTCATFGSYFLLRKHFPTVEALARKAIELTDVNAIASDGWYLLARKEH 385

Query: 317 SKGDYEKAGLYYMASVKEINKPHEFIFPY-YGLGQVQLKLGDFRSALTNFEKVLEIYPDN 375
           ++GD E+A  YY  S +      +   P  +G  Q+ ++  DF  A    EK+++    N
Sbjct: 386 TEGDPERALEYYNRSDQARGGADKGYPPAKFGAVQMLVRRKDFDGAKFRLEKIIQ-QTKN 444

Query: 376 CETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTA 435
            E +  LG IY        A E+   ++  + + A+A   +  LL S  T    D  K  
Sbjct: 445 PEAMALLGSIY--------ADEVFAASSSKEDKSAEAKKAIS-LLESVRTSWKADKKKLT 495

Query: 436 RT---------LLKKAGEEVPIEVLNNIGVIHF------EKGEFESAHQSFKDALGDGIW 480
                      L + +  E  ++ LN +  +        EK +     Q+  D L + + 
Sbjct: 496 PDESVLLYLARLYETSAPEKSMQCLNQVEEMQLAQIPDDEKPDNVEGEQAVNDVLRERLS 555

Query: 481 LTLLDSKT----KTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLE 536
             LL++      ++  I+ + +MLQ          E + +  +      T+ +NLAR  E
Sbjct: 556 PQLLNNIGCFLYQSDKIEQARTMLQTALNACVQAQERE-DASDTDAYVTTISYNLARTYE 614

Query: 537 QIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNAL 596
                  A  +Y  +L +++DYV+A  RL  IA   N      + + +  +         
Sbjct: 615 AAGMLDEAKKVYEGLLERHRDYVEANARLTYIALRLNPGDEGSKRMTKLYETEASNMEVR 674

Query: 597 SMLGDLELKNDDWVKAKETFRAASDATDGK--------------DSYATLSLGNWNYFAA 642
           ++ G        W   K   R A+ A D +              D YA   +GN  Y   
Sbjct: 675 ALYG--------WYLNKSKRRVANLAEDHEQRHYKHTLQGYDKHDRYALTGMGNL-YLLT 725

Query: 643 LRNEKRAPKLEATH----LEKAKELYTRVIVQHTSNLYAANGAGVVLA-EKGQFDVSKDL 697
            R+ +R  + E        EKA E + + +     N YAA G  + L  ++  +  +  +
Sbjct: 726 GRDMRRDGEQEKEKRHKIYEKAVEFFDKALQLDPKNAYAAQGIAIALVDDRKDYSTAVQI 785

Query: 698 FTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLA 757
           F++V++    S       V++NL HV+     F    K  +N   +     DAQIL  L 
Sbjct: 786 FSKVRDTLRDST------VYLNLGHVFAELRQF---TKSIENDRAR-----DAQILACLG 831

Query: 758 RTHY---EAEQWQDCKKSLL----RAIHLAPSNYTLRFDAGVAMQKFS--ASTLQKTRRT 808
           R  +   + EQ     K+ L    RA   AP    L F+      + +  A +L + ++T
Sbjct: 832 RVWFLKGKQEQNLTAMKTALEYAERARSAAPDQIHLEFNIAFVQNEIALLAISLPEVQKT 891

Query: 809 ADEVRSTVAELENAVRVFSHLSAASN 834
           +++V   +  L  A+  F  ++++ N
Sbjct: 892 SEDVEEAMNGLTAAIEAFDKIASSKN 917


>gi|322707096|gb|EFY98675.1| RNA polymerase II transcription elongation factor (Ctr9), putative
            [Metarhizium anisopliae ARSEF 23]
          Length = 1178

 Score =  159 bits (401), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 251/1040 (24%), Positives = 439/1040 (42%), Gaps = 188/1040 (18%)

Query: 2    ACVYIPVQNSEEE--VRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQF 59
            + + IPVQ  +E+  V + L+ L  D +++  + + E+A    W+ +A  Y KQ K++  
Sbjct: 31   SAIDIPVQGDQEDEAVEIDLEDLLDDPTELCTLFENERAAKTYWMTVALAYAKQKKIDHA 90

Query: 60   RQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYL----------GKIETKQREKEEH 109
             ++L  GS        +    ++++++  L   Y +           G   ++ + KE +
Sbjct: 91   IEMLIRGSGA----IQSSNPRDKVSMICCLCWMYLWKSREAPRVAPDGVRVSEAKTKEYY 146

Query: 110  FILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQAS---------------SAFKIV 154
              LAT   N A+R++   P  ++ +G LLL +  ++  S               +A K  
Sbjct: 147  LQLATSSLNDAARLNPSFPPIFLARGVLLLLRASLQAPSKTAGGIGSEKNELLKTAVKSF 206

Query: 155  LEADR----DNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSC--PGAIRLGIGLCRY 208
             +A R     N+ AL+G+A   F+  +Y D+L  Y+  L   P    P   R+GIG C +
Sbjct: 207  DDALRVSQGKNMLALMGKARAYFSMHKYPDALATYQDVLHKMPDLVDPDP-RIGIGCCFW 265

Query: 209  KLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGI---------RKGM-EKMQ 258
            +LG    A+ A++R+L+++P++  A + L +  L A+    +         RK M E  Q
Sbjct: 266  QLGFKEDAKVAWERSLEINPDSKIANILLGLFYLDASGHVPVNSDDFLKLYRKAMTEYTQ 325

Query: 259  RAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSK 318
            ++F++     +  +  A +F         ++L   A+  T+     S  +Y LAR  H  
Sbjct: 326  KSFKLDKEVPITCSTFAGYFLSRKAWENADKLAHKAIQYTDVNAIASDGWYLLARKAHYN 385

Query: 319  GDYEKAGLYYMASVKEINKPHEFIFP-YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCE 377
             D EKA  YY  +            P  +G+ Q+ +   D   A    EK+++    N E
Sbjct: 386  DDAEKASDYYRRADDARGGADTGYLPAKFGVAQLSVLKNDLGEAKLRLEKMIQ-QSKNHE 444

Query: 378  TLKALGHIYVQ---LGQ-----------IEKAQELL---RKAAKIDPR-----DAQAFID 415
             +  LG +Y +    GQ           ++KA  LL   R A K DP+     DA   ++
Sbjct: 445  AMILLGTLYAEEIFAGQKSDSKEDKSAEMKKAITLLESVRNAWK-DPKRTIAPDASVLLN 503

Query: 416  LGELLISSDTGAALDAFKTARTL--------------LKKAGEEV------PIEVLNNIG 455
            L  L        AL   +    L                +A  +V      P ++LNNIG
Sbjct: 504  LARLYELDQPEKALQCLQQVEQLELDQIPKSERPTDAENEAAAQVEMRKFLPPQLLNNIG 563

Query: 456  VIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDG 515
              H +  + E A + F+ AL   + +   +    T  + +S S                 
Sbjct: 564  CFHSQAEKHELASEMFEAALSACMRIGEKEPGMDTDALVSSIS----------------- 606

Query: 516  NHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNL 575
                         FNL R  E    T  A  +Y  +L ++ DY DA  RLA I K R N 
Sbjct: 607  -------------FNLGRSYESRGLTDKAMEVYEGLLARHDDYTDARTRLAYI-KLRKN- 651

Query: 576  QLSIELVNEALKVNGKYPNALSML-----GDLELKN-DDWV--KAKETFRAASDATDGK- 626
                         N + P+A++ L      DLE++    W   K     R A+   D + 
Sbjct: 652  ------------PNKEGPDAVAKLYQENTSDLEVRALYGWYLGKVHSRKRPANIVEDPEF 699

Query: 627  -------------DSYATLSLGNWNYFAA--LRNEKRAPKLEATHL-EKAKELYTRVIVQ 670
                         D YA + +GN     A  +R E  + K + + +  KA E + + +  
Sbjct: 700  RHYKHTLQNYDKHDRYALIGMGNLYLLQAREMRRETESDKQKRSVIYGKAVEFFEKALSL 759

Query: 671  HTSNLYAANGAGVVLAE-KGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGN 729
               N YAA G  + L E K  +  +  +F +V+E       V+ P V++NL HV+     
Sbjct: 760  DPKNAYAAQGVAIALVEDKKDYKSALTIFNKVRET------VREPHVYVNLGHVFAELRQ 813

Query: 730  FALAMKMYQNCLRKFYYNTDAQILLYLART-------HYEAEQWQDCKKSLLRAIHLAPS 782
            ++ A++ Y+  L K     D  IL  L RT         + + +    +   +A+ +AP 
Sbjct: 814  YSKAIENYEIALTKDGKANDPVILSCLGRTWLNRGRSERDIDAYGKALECAQQALEVAPD 873

Query: 783  NYTLRFD-AGVAMQKFSA-STLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGF 840
                +F+ A V +Q  +    L + RRTA+++ +  A LE+A+     L A + L    +
Sbjct: 874  QVHYKFNVAFVQIQLVTTIQNLPENRRTAEQLETAAAGLESAI---ESLDAIATLPQTPY 930

Query: 841  DEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQ--EAARQAALAEEARRKAEEQKK 898
             +  I       ++ L   ++ R  A+++E + + ++  +AA++   AE  RR  EEQ++
Sbjct: 931  PKHDIEQRANMARNTL-RKQLERAIAKQKEWEEKNKEKIQAAKEQREAELKRR--EEQRQ 987

Query: 899  YLLEKRKLEDEQKRLRQQEE 918
             +LEK +  + Q+++R++ E
Sbjct: 988  EILEKER--ERQEKIRKERE 1005


>gi|302505487|ref|XP_003014450.1| hypothetical protein ARB_07012 [Arthroderma benhamiae CBS 112371]
 gi|291178271|gb|EFE34061.1| hypothetical protein ARB_07012 [Arthroderma benhamiae CBS 112371]
          Length = 1203

 Score =  159 bits (401), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 221/932 (23%), Positives = 391/932 (41%), Gaps = 138/932 (14%)

Query: 2   ACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQ 61
           + V IP    + EV ++L +LP D +++  +L  E+A  + W+IIA  Y KQ +++   +
Sbjct: 32  SAVDIPASTFDSEVEISLQELPDDPTELCTLLDNEKAAKNFWVIIALAYAKQKQIDHAIE 91

Query: 62  ILEEGSSPEIDEYYADVRYERIAILNALGVYYTYL------------GKIETKQREKEEH 109
           IL  G    +         ER+++L    + + YL            G++ ++ + KE +
Sbjct: 92  ILTRG----LASLAHGATKERLSLLG--WICWLYLIKSRQAPRVAPEGQLHSEAKTKEFY 145

Query: 110 FILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE------------------VEQASSAF 151
              AT   N+ASR++   P  ++ +G L + +                    VE    A 
Sbjct: 146 LQAATATLNEASRLNPAFPPLFLARGVLSILRASLQPPSKPLRPGTIDTSERVESLQQAI 205

Query: 152 KIVLEADR----DNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGA-IRLGIGLC 206
           K   E+ +     N+ A+LG+A   +  GRY+++LE Y+ AL   PS      R+GIG C
Sbjct: 206 KCFDESAKAFGGRNIMAILGRARANYMLGRYAEALEGYQEALVKMPSMRDPDPRIGIGCC 265

Query: 207 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANE---------AAGIRKGMEK- 256
            ++L    +A+ A+ RAL L+P++  A + LA   L  +          ++  +  M + 
Sbjct: 266 LWQLDFKDQAKVAWNRALSLNPDSKAANILLAAYYLHDSSRHSTSDPEFSSLYKTAMTQY 325

Query: 257 MQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYH 316
            Q+AF++     M      ++F        VE L   A+ +T+     S  +Y LAR  H
Sbjct: 326 TQKAFKLDKEYPMTCATFGSYFLLRKHFPTVEALARKAIELTDVNAIASDGWYLLARKEH 385

Query: 317 SKGDYEKAGLYYMASVKEINKPHEFIFP-YYGLGQVQLKLGDFRSALTNFEKVLEIYPDN 375
           ++GD E+A  YY  S +      +   P  +G  Q+ ++  DF  A    EK+++    N
Sbjct: 386 TEGDPERALEYYNRSDQARGGADKGYPPAKFGAVQMLVRRKDFDGAKFRLEKIIQ-QTKN 444

Query: 376 CETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTA 435
            E +  LG +Y        A E+   A   + + A+A   +  LL S  T    D  K  
Sbjct: 445 PEAMALLGSLY--------ADEVFAAANSKEDKSAEAKKAIS-LLESVRTSWKADKKKLT 495

Query: 436 RT---------LLKKAGEEVPIEVLNNIGVIHF------EKGEFESAHQSFKDALGDGIW 480
                      L + +  +  ++ LN +  +        EK E     Q+  D L + + 
Sbjct: 496 PDESVLLYLARLYETSAPDKSMQCLNQVEEMQLAQIPDDEKPENVEGEQAMTDILRERLS 555

Query: 481 LTLLDSKT----KTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLE 536
             LL++      +   I+ + +MLQ          E + +  +      T+ +NLAR  E
Sbjct: 556 PQLLNNIGCFLYQADKIEPARTMLQTALNACVQAQERE-DASDTDAYVTTISYNLARTYE 614

Query: 537 QIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNAL 596
                  A  +Y  +L ++ DYV+A  RL  I+  ++               +G+    +
Sbjct: 615 AAGMLDEAKKVYEGLLERHSDYVEANARLTYISLRQD--------------PSGEGSKKM 660

Query: 597 SMLGDLELKNDD------WVKAKETFRAASDATDGK--------------DSYATLSLGN 636
           + L + E  N +      W   K   R A+ A D +              D YA   +GN
Sbjct: 661 TKLYETEASNMEVRALYGWYLNKTKRRVANLAEDHEQRHYKHTLQGYDKHDRYALTGMGN 720

Query: 637 WNYFAALRNEKRAPKLEATH----LEKAKELYTRVIVQHTSNLYAANGAGVVLA-EKGQF 691
             Y    R+ +R  + E        EKA E + + +     N YAA G  + L  ++  +
Sbjct: 721 L-YLLTGRDMRRDGEQEKEKRHKIYEKAVEFFDKALQLDPKNAYAAQGIAIALVDDRKDY 779

Query: 692 DVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQ 751
             +  +F++V++    S       V++NL HV+     F  +++ Y+  L K     DAQ
Sbjct: 780 STAVQIFSKVRDTLRDST------VYLNLGHVFAELRQFTKSIENYEISLSKDRAR-DAQ 832

Query: 752 ILLYLARTHY---EAEQWQDCKKSLL----RAIHLAPSNYTLRFDAGVAMQKFS--ASTL 802
           IL  L R  +   + EQ     K+ L    RA   AP    L F+      + +  A +L
Sbjct: 833 ILACLGRVWFLKGKQEQNLTAMKTALEYAERARSAAPDQIHLEFNIAFVQNEIALLAISL 892

Query: 803 QKTRRTADEVRSTVAELENAVRVFSHLSAASN 834
            + ++++++V   +  L  A+  F  ++++ N
Sbjct: 893 PEGQKSSEDVEEAMNGLTAAIEAFDKIASSKN 924


>gi|171686578|ref|XP_001908230.1| hypothetical protein [Podospora anserina S mat+]
 gi|170943250|emb|CAP68903.1| unnamed protein product [Podospora anserina S mat+]
          Length = 1275

 Score =  159 bits (401), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 237/998 (23%), Positives = 405/998 (40%), Gaps = 171/998 (17%)

Query: 3   CVYIPVQNSEEE-------VRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGK 55
            + IPVQ+S ++       V V L++L  D +++  +L+ E A    W+ +A  Y KQ K
Sbjct: 33  TIDIPVQDSAQDQDEDPQAVEVNLEELADDPTELCTLLEMEHAARTYWMTVALAYAKQKK 92

Query: 56  VEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTY-------LGKIETKQREKEE 108
           V+   +IL  G    +    ++ R E++ ++  L   Y +       +    T  R KE 
Sbjct: 93  VDFAIEILSRG----VVAMQSNQR-EKLTVITCLCWMYLWKSREAPRVAPEGTDARTKEY 147

Query: 109 HFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQAS---------------SAFKI 153
           +   ATQ  N ASR++   P  ++ +G LLL K  ++  S               +A K 
Sbjct: 148 YLQQATQSLNDASRLNPAFPPLFLARGVLLLLKASLQSPSQDPNGVDVQKSEHVRNALKS 207

Query: 154 VLEADR----DNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS-CPGAIRLGIGLCRY 208
             EA R     N+ A +G+A   F+  +Y +SL  Y+  L   P       R+G+G C +
Sbjct: 208 FEEAIRVSHGKNMLASMGKARALFSLAKYQESLAAYQDVLAKMPDLVDPDPRIGVGCCLW 267

Query: 209 KLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGI---------RKGM-EKMQ 258
           +LG    A+ A++R+L++ P++  A + L +  L A+              +K M E  Q
Sbjct: 268 QLGYKDDAKGAWERSLEISPDSKIAKILLGLYYLDASSQVPTNSPEFLRYYKKAMTEYTQ 327

Query: 259 RAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSK 318
            +F+      +     A +F    Q   V+ L   A+  T+     S  +Y LAR  H +
Sbjct: 328 DSFKRDKNLPLTCATFAGYFLARKQFPNVDSLAHKAIQYTDVNAIASDGWYLLARKEHYE 387

Query: 319 GDYEKAGLYYMASVKEINKPHEFIFP-YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCE 377
           G+ +KA  YY  +            P  +GL Q+ +   D   A    EK+++    N E
Sbjct: 388 GNLDKASDYYRRADDARGGVERGYLPAKFGLAQLSVLRNDLGEAKLRLEKMIQ-QSKNLE 446

Query: 378 TLKALGHIYVQ--------------LGQIEKAQ---ELLRKAAKIDPR-----DAQAFID 415
            +  LG +Y +                + +KA    E +R A K DP+     DA   ++
Sbjct: 447 AMILLGTLYAEEVFANQTAAIKEDKTAETKKALTYLEAVRTAWK-DPKKGMLPDAAVLLN 505

Query: 416 LGELLISSDTGAALDAFKTA-----------------------RTLLKKAGEEVPIEVLN 452
           L  L  +     AL   +                         R+ ++K    +P ++LN
Sbjct: 506 LARLYETEFPDRALQCLQQVEQLEIDQVPKSEYPADAEDQAVIRSAIRK---HLPPQLLN 562

Query: 453 NIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFE 512
           NIG  + + G  + A + F+ AL     ++ L+       +D  A +             
Sbjct: 563 NIGCFYSQDGRHQLATEYFQAALDSCARISSLNDTE----VDTDALL------------- 605

Query: 513 NDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKAR 572
                        T+ FNL R  E   D   A   Y  +L ++ +Y DA  RLA I   +
Sbjct: 606 ------------TTISFNLGRSYEYEGDVDRAIETYERLLSRHSNYTDARARLAYIKLRK 653

Query: 573 NNLQLSIELVNEALKVNGKYPNALSM-------LGDLELK------NDDWVKAKETFRAA 619
           N  +   + V +  + N   P+ L +       LG L  K      N+D       ++  
Sbjct: 654 NPNKDGPDAVAKLYQDN---PSDLEVRALYGWFLGKLSAKKRPANINED--PEHRHYKHT 708

Query: 620 SDATDGKDSYATLSLGNWNYFAA--LRNEKRAPKLEATHL-EKAKELYTRVIVQHTSNLY 676
               D  D YA + +GN    +A  +R E    + + + +  +A E + + +     N Y
Sbjct: 709 LQNYDKHDRYALVGMGNLLLGSAREMRRESEQDRQKRSSMYSRAVEFFDKALQLEPKNAY 768

Query: 677 AANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKM 736
           AA G  + L E       KD  T +Q        VQ   V++NL H+Y   G F+ A++ 
Sbjct: 769 AAQGVAIALVED-----KKDAKTALQAFLKVKETVQDAHVFVNLGHIYTELGQFSKAIES 823

Query: 737 YQNCLRKFYYNTDAQILLYLARTHYEA--------EQWQDCKKSLLRAIHLAPSNYTLRF 788
           Y+  L K     DA +L  L RT            E +    +   +A+ +AP     +F
Sbjct: 824 YEIALSKEGKANDAGVLSCLGRTWLNKARTDKKFIEHYNMALEYAQKALKVAPEQAHFKF 883

Query: 789 DAGVAMQKFSASTLQK---TRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGFD-EKK 844
           +    +Q   A TL++     R + ++      LE A++    ++A  N      D E++
Sbjct: 884 NVAY-VQIMLADTLRQFASQDRNSFQLEQAAEGLEQAIKTLDEIAAGPNPPYPKHDIEQR 942

Query: 845 INTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEAARQ 882
            N      ++ L+ A    +A +  E +N+++++AA Q
Sbjct: 943 ANMARNTVRNQLNRA---LQAQKEYEAKNKEKRDAAIQ 977


>gi|367008044|ref|XP_003688751.1| hypothetical protein TPHA_0P01590 [Tetrapisispora phaffii CBS 4417]
 gi|357527061|emb|CCE66317.1| hypothetical protein TPHA_0P01590 [Tetrapisispora phaffii CBS 4417]
          Length = 1077

 Score =  159 bits (401), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 239/1008 (23%), Positives = 431/1008 (42%), Gaps = 159/1008 (15%)

Query: 6   IPVQNSEEEVRVALD-QLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQILE 64
           IP++ SEE V + L+  LP D SD+  +L  E +  + WL IA  Y  QGKV    +++E
Sbjct: 20  IPLKASEEVVSIDLETDLPDDPSDLRTLLVEESSDKEHWLTIALAYCHQGKVTDGIKLIE 79

Query: 65  EGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNK-ASRI 123
                      A    ++  +   L   +  L K      E +++ +   +Y+ K A   
Sbjct: 80  MALE-------AFRNTDKAPLHTFLTWAHLDLAKGTFTNSEAKQYELNQAEYHLKEAINY 132

Query: 124 DMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEA----DR-------DNVPALLGQACVE 172
           D    S  +    L   +G+ ++A     I ++     DR        N   LL +A + 
Sbjct: 133 DPSTVSNMLATIDLYYQRGQYDKALETSDIFIKGIAAEDRRNGRTTKTNCLFLLLRAKIL 192

Query: 173 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 232
           + +  YS SL F++  L ++P      R+GIG+C ++L     A +++ RA ++DPEN  
Sbjct: 193 YQKKNYSASLRFFQELLVLNPVLKPDPRIGIGMCFWQLKDHSMAVKSWSRAKEIDPENKT 252

Query: 233 ALVALAVMDLQ------ANEAAGIRKGMEKMQRAFEIYP---YCAMALNYLANHFFFTGQ 283
           A + + + D         N+    ++  E +     +Y       + L  L ++F+F G+
Sbjct: 253 ASILVLLGDFHNSLTNSENDEQFKKQYSEAILNLENLYSGNKSNPVILTLLQSYFYFKGE 312

Query: 284 HFLVEQLTETAL----AVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPH 339
           +  V  + E  +    ++T +      S++  ARSY++  DY KA   +  S+K   K  
Sbjct: 313 YQSVIDIYEKKIMGMSSITANTILSEASFW-CARSYYALNDYRKAFTMFQESLK---KSE 368

Query: 340 EFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQ----------- 388
           + +   +GLGQ Q+K       +  FE + + + +  E    LG +Y +           
Sbjct: 369 DNLLSKFGLGQTQIKNDLLEEGILTFENIYKSHENIQELNYILGLLYARKCLDTKTEYSH 428

Query: 389 ---LGQIEKAQELLRKAAKIDPRD------AQAFIDLGELL-ISSDTGAALDAFKTARTL 438
                 I KA + L K   +           +AF+ L +L  +      ALD        
Sbjct: 429 KEHTKLISKAVQFLEKYISLTTSKKNQLVIPKAFLILSQLYELQVQYKQALDILCRYLDD 488

Query: 439 LKKAGEE-VPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASA 497
           LK + E+ +PIE+LNNIG  +F  G+ E +                              
Sbjct: 489 LKISNEKNIPIELLNNIGCFYFITGQKEKS------------------------------ 518

Query: 498 SMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQD 557
             L+F +M    + +  GN   L   ++T+ +N+AR  E+  D  A +++Y  IL K+  
Sbjct: 519 --LEFFNMAK-EKLDLAGNDDSL---EITLQYNIARSSEE--DLAATNIVYSDILSKHPS 570

Query: 558 YVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALS--------MLGDLELKND-D 608
           YV   +R       +N    S E+  E   +  + P  L         M   L+  N+ D
Sbjct: 571 YVHLKVRYLFTKFLQNKNSQSDEIEKEVNDLLQRNPADLEVRALYTWFMKNGLKNSNNID 630

Query: 609 WVKAKETFRAASDAT--------DGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKA 660
             K KE +R +  +T        +  D YA +SLGN+    A  N+K   K E ++L K 
Sbjct: 631 EAKYKE-YRNSEISTSKDTLTKYNSHDLYALISLGNFYCVMAKENKKTPAKCEQSYL-KG 688

Query: 661 KELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINL 720
            +LY + +     N++AA G  ++ AE  +   + +++ +++++      +   DV +N+
Sbjct: 689 IQLYQKALQIDPYNIFAAQGIAIIFAESKRLGAALEIWRKIRDS------LDTEDVHMNI 742

Query: 721 AHVYFAQGNFALAMKMYQNCLRKF-YYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHL 779
           +H       +  A++ Y+  L+KF  Y+  A++   L +T YE    ++      +A+  
Sbjct: 743 SHCLLEMREYVKAIEGYELILKKFPNYSKLAKVYNLLGKTWYERGNKENSLSCYKKALQN 802

Query: 780 APSNYTLRFDAG--------VAMQKFSASTLQ-----------KTRRTADEVRSTVAELE 820
           A ++  L  ++         +A  KF+   L               RT +++ S +  LE
Sbjct: 803 AETSLKLEIESSNDLENSPKIASYKFNTVLLHFQIAEVVRRSGSKDRTVEDISSALTGLE 862

Query: 821 NAVRVFSHLSAASNLHLHGFDEK-KINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEA 879
           NA+ +   L   S    + F  K +I   ++  +  +  A + R   E+EE +       
Sbjct: 863 NALVLLKELKDKS----YKFIVKDEIEQRIQLGETTMKNA-LQRSLKEQEEYE------- 910

Query: 880 ARQAALAEEARRKAEE---QKKYLLEKRKLEDEQKRLRQQEEHFQRVK 924
            +Q    E+AR+  EE   ++K  +EK K E EQ ++ +Q+E F +++
Sbjct: 911 LQQTGRLEQARKLIEENELKEKNRIEKEK-ELEQMKIAKQKEEFAKLQ 957


>gi|302655461|ref|XP_003019518.1| hypothetical protein TRV_06455 [Trichophyton verrucosum HKI 0517]
 gi|291183248|gb|EFE38873.1| hypothetical protein TRV_06455 [Trichophyton verrucosum HKI 0517]
          Length = 1201

 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 221/932 (23%), Positives = 391/932 (41%), Gaps = 138/932 (14%)

Query: 2   ACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQ 61
           + V IP    + EV ++L +LP D +++  +L  E+A  + W+IIA  Y KQ +++   +
Sbjct: 32  SAVDIPASTFDSEVEISLQELPDDPTELCTLLDNEKAAKNFWVIIALAYAKQKQIDHAIE 91

Query: 62  ILEEGSSPEIDEYYADVRYERIAILNALGVYYTYL------------GKIETKQREKEEH 109
           IL  G    +         ER+++L    + + YL            G++ ++ + KE +
Sbjct: 92  ILTRG----LASLAHGATKERLSLLG--WICWLYLIKSRQAPRVAPEGQLHSEAKTKEFY 145

Query: 110 FILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE------------------VEQASSAF 151
              AT   N+ASR++   P  ++ +G L + +                    VE    A 
Sbjct: 146 LQAATATLNEASRLNPAFPPLFLARGVLSILRASLQPPSKPLRPGTIDTSERVESLQQAI 205

Query: 152 KIVLEADR----DNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGA-IRLGIGLC 206
           K   E+ +     N+ A+LG+A   +  GRY+++LE Y+ AL   PS      R+GIG C
Sbjct: 206 KCFDESAKAFGGRNIMAILGRARANYMLGRYAEALEGYQEALVKMPSMRDPDPRIGIGCC 265

Query: 207 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANE---------AAGIRKGMEK- 256
            ++L    +A+ A+ RAL L+P++  A + LA   L  +          ++  +  M + 
Sbjct: 266 LWQLDFKDQAKVAWNRALSLNPDSKAANILLAAYYLHDSSRHSTSDPEFSSLYKTAMTQY 325

Query: 257 MQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYH 316
            Q+AF++     M      ++F        VE L   A+ +T+     S  +Y LAR  H
Sbjct: 326 TQKAFKLDKEYPMTCATFGSYFLLRKHFPTVEALARKAIELTDVNAIASDGWYLLARKEH 385

Query: 317 SKGDYEKAGLYYMASVKEINKPHEFIFP-YYGLGQVQLKLGDFRSALTNFEKVLEIYPDN 375
           ++GD E+A  YY  S +      +   P  +G  Q+ ++  DF  A    EK+++    N
Sbjct: 386 TEGDPERALEYYNRSDQARGGADKGYPPAKFGAVQMLVRRKDFDGAKFRLEKIIQ-QTKN 444

Query: 376 CETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTA 435
            E +  LG +Y        A E+   A   + + A+A   +  LL S  T    D  K  
Sbjct: 445 PEAMALLGSLY--------ADEVFAAANSKEDKSAEAKKAIS-LLESVRTSWKADKKKLT 495

Query: 436 RT---------LLKKAGEEVPIEVLNNIGVIHF------EKGEFESAHQSFKDALGDGIW 480
                      L + +  +  ++ LN +  +        EK E     Q+  D L + + 
Sbjct: 496 PDESVLLYLARLYEASAPDKSMQCLNQVEEMQLAQIPDDEKPENVEGEQAMTDVLRERLS 555

Query: 481 LTLLDSKT----KTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLE 536
             LL++      +   I+ + +MLQ          E + +  +      T+ +NLAR  E
Sbjct: 556 PQLLNNIGCFLYQADKIEPARTMLQTALNACVQAQERE-DASDTDAYVTTISYNLARTYE 614

Query: 537 QIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNAL 596
                  A  +Y  +L ++ DYV+A  RL  I+  ++               +G+    +
Sbjct: 615 AAGMLDEAKKVYEGLLERHSDYVEANARLTYISLRQD--------------PSGEGAKKM 660

Query: 597 SMLGDLELKNDD------WVKAKETFRAASDATDGK--------------DSYATLSLGN 636
           + L + E  N +      W   K   R A+ A D +              D YA   +GN
Sbjct: 661 TKLYETEASNMEVRALYGWYLNKTKRRVANLAEDHEQRHYKHTLQGYDKHDRYALTGMGN 720

Query: 637 WNYFAALRNEKRAPKLEATH----LEKAKELYTRVIVQHTSNLYAANGAGVVLA-EKGQF 691
             Y    R+ +R  + E        EKA E + + +     N YAA G  + L  ++  +
Sbjct: 721 L-YLLTGRDMRRDGEQEKEKRHKIYEKAVEFFDKALQLDPKNAYAAQGIAIALVDDRKDY 779

Query: 692 DVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQ 751
             +  +F++V++    S       V++NL HV+     F  +++ Y+  L K     DAQ
Sbjct: 780 STAVQIFSKVRDTLRDST------VYLNLGHVFAELRQFTKSIENYEISLSKDRAR-DAQ 832

Query: 752 ILLYLARTHY---EAEQWQDCKKSLL----RAIHLAPSNYTLRFDAGVAMQKFS--ASTL 802
           IL  L R  +   + EQ     K+ L    RA   AP    L F+      + +  A +L
Sbjct: 833 ILACLGRVWFLKGKQEQNLTAMKTALEYAERARSAAPDQIHLEFNIAFVQNEIALLAISL 892

Query: 803 QKTRRTADEVRSTVAELENAVRVFSHLSAASN 834
            + ++++++V   +  L  A+  F  ++++ N
Sbjct: 893 PEGQKSSEDVEEAMNGLTAAIEAFDKIASSKN 924


>gi|262302911|gb|ACY44048.1| SH2 domain binding protein [Eurytemora affinis]
          Length = 178

 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 77/178 (43%), Positives = 113/178 (63%)

Query: 147 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 206
           A   F  VL  +  ++P+LLG+AC+ FN+  Y ++L +YK+AL+ +P CP  +RLG+G C
Sbjct: 1   ADQQFNFVLSQNPSSIPSLLGKACIAFNKKDYKNALAYYKKALRTNPKCPANVRLGMGHC 60

Query: 207 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY 266
             KLG   KAR AF+RAL+LDP+ V A+V +AV+ L + E   IR G++K+ RA+ I   
Sbjct: 61  FLKLGNPDKARLAFERALELDPDCVGAMVGIAVLQLNSQEPENIRDGVQKLSRAYGIDSQ 120

Query: 267 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 324
             M LN+LANHFFF   +  V+ L   A   T +   ++ S Y LAR +H + DY++A
Sbjct: 121 NPMVLNHLANHFFFKKDYNKVQHLALHAFHSTENELMRAESCYQLARCFHVQHDYDQA 178


>gi|344299803|gb|EGW30156.1| hypothetical protein SPAPADRAFT_73543 [Spathaspora passalidarum
           NRRL Y-27907]
          Length = 1137

 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 222/916 (24%), Positives = 392/916 (42%), Gaps = 135/916 (14%)

Query: 6   IPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQILEE 65
           +P+ N E      ++ LP D +D++  L+ E      W+ +A  Y K  K+ +   I++ 
Sbjct: 48  VPLSNGEIVQINLVNDLPEDHNDLIGFLEGEHCGKQYWITVASAYAKTNKLTEAMGIID- 106

Query: 66  GSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNK-ASRID 124
            ++ ++D +  + +    + L  L   +  LG       EK+++   A+   NK A RI 
Sbjct: 107 -AALKLDYFGEEDKKSFQSFLVWLYFKFVSLG------IEKDQYLNQASVEINKLAQRIK 159

Query: 125 MH-------EPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGR 177
                      S  + +  LLL  G+ + A   F  +L  D++N  A LG+A V  N+ +
Sbjct: 160 TDASTSTSNSTSNILSQAVLLLFNGQDDDALDIFDKILRIDQNNCFATLGKAQVILNKTK 219

Query: 178 -YSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEA--L 234
            YS +L+ Y++ L ++P      RLG+GLC + L     A  A++R L+LDPEN++A   
Sbjct: 220 NYSLALKLYQQVLILNPLMKPDPRLGVGLCFWFLKDDKMALAAWERCLELDPENIKAKIF 279

Query: 235 VALAVMDLQANEAAGIRKGMEKMQRAF-EIY------PYCAMALNYLANHFFFTGQHFLV 287
           + LA   L  N +    + +E  +    E+       P  A  L  LA+++F  G +  V
Sbjct: 280 INLAKFHLAFNNSLSDEEFLENYKTCLVEVSKINAKAPQDATVLLPLASYYFSKGDYETV 339

Query: 288 EQLTETAL-------AVTNHGPTKSHSYYN----------LARSYHSKGDYEKAGLYYMA 330
           E++ +  +        +T        S YN          L R   +  D+ +A  Y+  
Sbjct: 340 EKIIKKIVYNITGDDNLTKFSNFTKISKYNSNILSQCCTWLGRIQFTNSDFLQASKYFQE 399

Query: 331 SVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLG 390
           ++K +N  +  I    GLGQ Q   G    A+  FE +L       E   +LG +Y +  
Sbjct: 400 AIK-LNDTN--IVAKLGLGQAQYNRGSIEEAIMTFESILRSNMKCLEVNYSLGILYSKQS 456

Query: 391 ---QIEKAQELLRKAAKI--------------------DPRDAQAFIDLGELLISSDTGA 427
              + E A ++L +  ++                    +P    A++ L +L  SSD   
Sbjct: 457 SRRKQEMAIQILERYVRLSNNRGLSSSKEDSSEFLLNKEPICLNAYLTLSKLYESSDVNQ 516

Query: 428 ALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSK 487
           +L+    A    K   + VP+EV NNIGV +F K  ++ A  +F+ AL            
Sbjct: 517 SLNYLNKAIESRKHISKPVPLEVYNNIGVFNFMKQNYDEASNNFQVALDQ---------- 566

Query: 488 TKTYVIDASASMLQFKDMQLFHRFENDGN-HVELPWN-KVTVLFNLARLLEQIHDTVAAS 545
                +D +    +FK          DG+  ++LP + KV++ FNLAR  ++I +   A 
Sbjct: 567 -----LDGA----EFKSP--------DGDLLIDLPQDLKVSLTFNLAR-SKEISNKDDAL 608

Query: 546 VLYRLILFKYQDYVDAYLRLAAI-----------AKARNNLQLSIELVNEALKVNGKYPN 594
            +Y  +L +   Y  A LR+  +            + +  L+  +   +  L++   Y  
Sbjct: 609 KIYETLLQECPHYFSAKLRILFLNCILEEGGYTKQEIKTELEALMSSNSSNLEIRSFYGW 668

Query: 595 ALSMLG-DLELKND-DWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKL 652
            +   G  L L  D D    K+T        D  D YA +SL N  Y    R+ K   + 
Sbjct: 669 FIKNFGKKLGLPADADTKHQKDTLV----DYDSHDCYALISLANI-YCIMARDAKGDNEK 723

Query: 653 EATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQ 712
              +  +A EL+T+VI     N+YAA G  +   E  + +   D+  +++++      + 
Sbjct: 724 RKKYYIRAIELFTKVISVDPKNVYAAQGLAIANIENKESNKGLDILRKIRDS------LN 777

Query: 713 MPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDC--- 769
              V++NL HV      +  A++ Y+  L +F    D++IL +L R  Y   Q ++    
Sbjct: 778 DISVYLNLGHVLTELKQYGKAIENYELALGRFTDGKDSKILSFLGRAWYLRAQSENNLSF 837

Query: 770 -KKSL------LRAIHLAPSNYTLRFD-AGVAMQKFSASTLQKT-RRTADEVRSTVAELE 820
            ++SL         I    S  ++RF+ A V  Q     T Q   +R  +++ + +  L+
Sbjct: 838 YRRSLEYSKLAFECIKGTGSKSSIRFNIAYVHFQIAEFVTKQPVFQRKLEDIEAAITGLK 897

Query: 821 NAVRVFSHLSAASNLH 836
             + + + L++    H
Sbjct: 898 EGIELLNELASDDEKH 913


>gi|83764950|dbj|BAE55094.1| unnamed protein product [Aspergillus oryzae RIB40]
 gi|391863430|gb|EIT72741.1| TPR-containing nuclear phosphoprotein that regulates K(+) uptake
           [Aspergillus oryzae 3.042]
          Length = 1200

 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 228/955 (23%), Positives = 398/955 (41%), Gaps = 114/955 (11%)

Query: 2   ACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQ 61
           + + IP    + EV V+L+ LP D +++  +L+ E+A  + W+IIA  Y KQ +++    
Sbjct: 33  SAIDIPASTLDSEVEVSLEGLPDDPTELCTLLENEKAAKNFWVIIALAYAKQKQIDHAID 92

Query: 62  ILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQ--------------REKE 107
           IL +G    +         E++ +L     +  +L  ++++Q              + K+
Sbjct: 93  ILNKG----LTSVAHGATKEKLGLLG----WVCWLLMLKSRQAPRVAPEGELYAEAKTKD 144

Query: 108 EHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-----------------VEQASSA 150
            +  LAT   N+ASR++   P  ++ +G L L +                   VE    A
Sbjct: 145 HYLQLATSTLNEASRLNPAFPPLFLARGVLSLLRASLHPPRPVRPGTVDTSERVESLRQA 204

Query: 151 FKIVLEADR----DNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGA-IRLGIGL 205
            K   E+ +     NV A+LG+A  ++  GRY+++LE Y++ L   P       R+GIG 
Sbjct: 205 LKCFEESSKAFGGRNVMAILGRARTQYMLGRYAEALEGYQKVLMKMPGLTDPDPRIGIGC 264

Query: 206 CRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDL-------QANEAAG--IRKGMEK 256
           C + LG   +A+ A++RAL L+P++  A + LAV  L         + A G   +  M +
Sbjct: 265 CLWHLGFKDQAKAAWERALALNPDSKVANILLAVYYLYDSSRHATTDPAFGSLYKVAMTQ 324

Query: 257 -MQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSY 315
             Q+AF++     M       +F     +  VE L   A+  T+     S  ++ L R  
Sbjct: 325 YTQKAFKLDKEYPMTGALFGGYFLLRKSYSTVETLARRAIEHTDVMQIASDGWFLLGRKA 384

Query: 316 HSKGDYEKAGLYYMASVKEINKPHEFIFP-YYGLGQVQLKLGDFRSALTNFEKVLEIYPD 374
           H +GD  +A  +Y  S +      +   P  +G  Q+Q+   D+  A    EK+++    
Sbjct: 385 HYEGDLTRAAEFYNRSDQARGGGDKGYLPARFGTVQMQVSNKDYDGAKFRLEKIIQ-QTK 443

Query: 375 NCETLKALGHIYVQ-------LGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGA 427
           N E +  LG +Y +       +G  E      +KA  +       + D G+ L   ++  
Sbjct: 444 NPECMILLGALYAEEVFTSERIGSKEDKSAEAKKAISLLESVRALWKDEGKKLSPEESVL 503

Query: 428 ALDAFKTARTLLKKAGEEVP-IEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDS 486
              A    RT  +K+ + +  +E L    ++  E  E     +  K AL   +   LL +
Sbjct: 504 VYLARLYERTAPEKSMQCLSQLEELQLAAIVEDEHREGLENEEQLKAALRVNLPPQLLSN 563

Query: 487 KT----KTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTV 542
                 +   +D + +M +          E +  H +      T+ +NL R  E      
Sbjct: 564 MGCFLYQAEKVDQARTMFEMALNACVRSQEKESEH-DTDALVTTISYNLGRTYEASDMPE 622

Query: 543 AASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDL 602
            A  +Y  +L ++ DY +A  RL  IA       L     +E  K   K   A S   +L
Sbjct: 623 EAKKVYEGLLERHGDYTEASARLTYIA-------LRQSPTDEGPKRMAKLYEADST--NL 673

Query: 603 ELKND-DWVKAKETFRAASDATDGK--------------DSYATLSLGNWNYFAA--LRN 645
           E++    W  +K   R A+ A D +              D Y+   +GN +   A  +R 
Sbjct: 674 EVRALFGWYLSKSKKRVANLAEDQEQRHYKHTLQYFDKHDRYSLTGMGNVHLMTARDMRR 733

Query: 646 EKRAPKLEATHL-EKAKELYTRVIVQHTSNLYAANGAGVVLAE-KGQFDVSKDLFTQVQE 703
           E    K +   + E+A E + + +     N YAA G  + L + K  +  +  +F+++++
Sbjct: 734 ENDQEKEKRRKMYERAVEFFDKALQLDPQNAYAAQGIAIALVDAKKDYSTAVHIFSKIRD 793

Query: 704 AASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLART---H 760
               S       V++NL HVY     +  +++ Y+  L K     DAQIL  L R     
Sbjct: 794 TLRDS------SVYLNLGHVYAELRQYTRSIEHYEAALSKDRAR-DAQILACLGRVWLLK 846

Query: 761 YEAEQWQDCKKSLL----RAIHLAPSNYTLRFDAGVAMQKFSA--STLQKTRRTADEVRS 814
            + E      K+ L    RA  +APS   L F+      + ++   +L +T++T  +V+ 
Sbjct: 847 GKQEMSLSAMKTALDYARRAHSVAPSQVHLEFNVAFVQNQIASLVYSLPETQKTVQDVQD 906

Query: 815 TVAELENAVRVFSHLSAASN-LHLHGFDEKKINTHVEYCKHLLDAAKIHREAAER 868
               L  AV  F  ++   N  +  G  E++ N      K L  A +  RE  E+
Sbjct: 907 ASDGLREAVESFGRIAQTKNPPYPAGALEQRANMGKTIIKQLERALQSQREYEEK 961


>gi|157939609|gb|ABW05529.1| SH2 domain binding protein [Speleonectes tulumensis]
          Length = 177

 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 77/177 (43%), Positives = 113/177 (63%)

Query: 147 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 206
           A + F  VL    +N+P+LLG+AC+ FN+  Y  +L FYK+AL+ +PSCP A+RLG+G C
Sbjct: 1   ADAQFNFVLNQSLNNIPSLLGKACIAFNKKDYRGALAFYKKALRTNPSCPAAVRLGMGHC 60

Query: 207 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY 266
             KLG   KA+ AF+RAL LD + V ALV LA+++L    +  I+ G++ + RA+ I   
Sbjct: 61  FLKLGNPEKAKLAFERALDLDSKCVGALVGLAILELNHQNSESIKNGVQMLSRAYTIDST 120

Query: 267 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEK 323
             M LN+LANHFFF   +  V+ L   A   T +   ++ S Y LAR++H +GDY++
Sbjct: 121 NPMVLNHLANHFFFKKDYHKVQHLALHAFHNTENEAMRAESCYQLARAFHVQGDYDQ 177


>gi|157939603|gb|ABW05526.1| SH2 domain binding protein [Narceus americanus]
          Length = 177

 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 78/177 (44%), Positives = 112/177 (63%)

Query: 147 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 206
           A + F  VL    +N+P+LLG+AC+ FN+  Y  +L FYK+AL+ +P+CP A+RLG+G C
Sbjct: 1   ADAQFNFVLGQSPNNIPSLLGKACIAFNKKDYRGALAFYKKALRTNPNCPAAVRLGMGHC 60

Query: 207 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY 266
             KLG+  KAR AF RAL LD + V ALV LAV++L       IR G++ + +A+ I   
Sbjct: 61  FMKLGKPDKARLAFDRALTLDSQCVGALVGLAVLELNNKTTDSIRNGVQMLSKAYTIDST 120

Query: 267 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEK 323
             M LN+LANHFFF   +  V+ L   A   T +   ++ S Y LAR++H +GDY++
Sbjct: 121 NPMVLNHLANHFFFKKDYHKVQHLALHAFHNTENEAMRAESCYQLARAFHVQGDYDQ 177


>gi|157939597|gb|ABW05523.1| SH2 domain binding protein [Limulus polyphemus]
          Length = 177

 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 77/177 (43%), Positives = 112/177 (63%)

Query: 147 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 206
           A + F  VL    +N+P+LLG+AC+ FN+  +  +L FYK+AL+  P CP A+RLG+G C
Sbjct: 1   ADAQFNFVLNQSPNNIPSLLGKACIAFNKKDFRGALAFYKKALRTSPKCPAAVRLGMGHC 60

Query: 207 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY 266
            YKLG+  KA+ AF+RALQLDP+ V ALV LAV++L    +  IR G++ + +A+ I   
Sbjct: 61  FYKLGKHEKAKLAFERALQLDPQCVGALVGLAVLELNLKSSESIRNGVQMLSKAYRIDST 120

Query: 267 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEK 323
             M LN+LANHFFF   +   + L   A   T +   ++ S Y LAR++H   DY++
Sbjct: 121 NPMVLNHLANHFFFKKBYGKXQHLALXAFHNTENEXMRAXSCYQLARAFHIXQDYDQ 177


>gi|262302959|gb|ACY44072.1| SH2 domain binding protein [Polyxenus fasciculatus]
          Length = 178

 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 76/178 (42%), Positives = 114/178 (64%)

Query: 147 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 206
           A + F  VL  + +++P+LLG+AC+ FN+  Y  +L +YK+AL+ +P CP A+RLG+G C
Sbjct: 1   ADAQFNFVLNQNPNDIPSLLGKACIAFNKKDYRGALAYYKKALRTNPKCPAAVRLGMGHC 60

Query: 207 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY 266
             KL +  KAR AF RAL+LD   V ALV LA++++    A  IR G++ + +A+ I P 
Sbjct: 61  FMKLNRQDKARLAFDRALELDGNCVGALVGLAILEINFKSAESIRNGVQLLSKAYTIDPM 120

Query: 267 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 324
             M LN+LANHFFF   +  V+ L   A   T +   ++ S Y LAR++H +GDY++A
Sbjct: 121 NPMVLNHLANHFFFKKDYEKVQHLAMHAFHNTENEAMRAESCYQLARAFHVQGDYDQA 178


>gi|259482949|tpe|CBF77911.1| TPA: RNA polymerase II transcription elongation factor (Ctr9),
           putative (AFU_orthologue; AFUA_5G05870) [Aspergillus
           nidulans FGSC A4]
          Length = 1027

 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 224/952 (23%), Positives = 381/952 (40%), Gaps = 178/952 (18%)

Query: 2   ACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQ 61
           + + IP    + EV V+L+ LP D +++  +L+ E+A  + W+IIA  Y KQ +++    
Sbjct: 34  SAIDIPASTLDSEVEVSLEGLPDDPTELCTLLENERAAKNFWVIIALAYAKQKQIDHAID 93

Query: 62  ILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGK------------IETKQREKEEH 109
           IL +G    +         E++ +L    V + YL K            + T+ R K+ +
Sbjct: 94  ILNKG----LASVAQGATKEKLGLLG--WVCWLYLLKSREAPRVVSDVGLGTEARTKDYY 147

Query: 110 FILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-----------------VEQASSAFK 152
              AT   N+ASR++   P  ++ +G L L +                   VE    A K
Sbjct: 148 IQQATGILNEASRLNPSFPPLFLARGVLSLLRASLHPPRPVRPGAVDNSERVESLRQALK 207

Query: 153 IVLEADR----DNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGA-IRLGIGLCR 207
              E+ +     N  A+LG+A   +  GRY+++LE Y++ L   P       R+GIG C 
Sbjct: 208 QFDESSKAFGGRNAMAILGRARAHYLLGRYAEALEGYQKVLMRMPGLTDPDPRIGIGCCL 267

Query: 208 YKLGQLGKARQAFQRALQLDPENVEALVALAVMDL-------QANEAAG--IRKGMEK-M 257
           ++LG   +A+ A++RAL L+P++  A + LAV  L         + A G   +  M +  
Sbjct: 268 WQLGFKEQAKAAWERALALNPDSKVANILLAVYYLYDSSRHATTDPAFGSLYKVAMTQYT 327

Query: 258 QRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHS 317
           Q+AF++     M      ++F     +  V+ L   ++  T+     S  +Y L R  H 
Sbjct: 328 QKAFKLDKEYPMTCALFGSYFLLRKAYSTVDTLARKSIENTDVMQIASDGWYLLGRKCHY 387

Query: 318 KGDYEKAGLYYMASVKEINKPHEFIFPY-YGLGQVQLKLGDFRSALTNFEKVLEIYPDNC 376
           +GD  KA  +Y  S +      +   P  +G  Q+Q+   D+  A    EK+++    N 
Sbjct: 388 EGDLAKAAEFYHRSDQARGGGDKGYLPAKFGSVQMQVSNKDYDGAKFQLEKIIQ-QTKNP 446

Query: 377 ETLKALGHIYVQ--------------LGQIEKAQELLR--------KAAKIDPRDAQAFI 414
           E +  L  +Y +                + +KA  L          ++ KI P D    +
Sbjct: 447 ECMTLLAALYAEEVFAAQKSGMKEDKSAEAKKAITLFEAVRALWKDESKKITP-DESVLV 505

Query: 415 DLGELLISSDTGAALDAFKTARTL-LKKAGEE------------------VPIEVLNNIG 455
            L  L   +    ++        L L +  +E                  +P ++LNN+G
Sbjct: 506 YLSRLYEQNAPDKSMQCLTQLEELQLAEISDEERPEGLEDEEMKAALRVNLPPQLLNNMG 565

Query: 456 VIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDG 515
              ++  +   A   F+ AL      +   S+ +   +D  A +                
Sbjct: 566 CFLYQSSQLNMARSMFQAALD-----SCARSQEREGELDTDALV---------------- 604

Query: 516 NHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNL 575
                     T+ +NL R  E       A  +Y  +L ++ DY +A  RL  +A  R+  
Sbjct: 605 ---------TTISYNLGRAFEASDMPDEAKKVYEALLERHSDYTEASARLTYLALRRSPT 655

Query: 576 QLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGK--------- 626
               + + +  + +       ++ G        W  +K   RAA+ A D +         
Sbjct: 656 DEGPKKMAKLYETDSTNLEVRALFG--------WYLSKSKKRAANIAEDHEQRHHKHTLQ 707

Query: 627 -----DSYATLSLGNWNYFAALRNEKRAPKLEATH----LEKAKELYTRVIVQHTSNLYA 677
                D YA   +GN +   A R+ +R    E        E+A E + + +     N YA
Sbjct: 708 YFDKHDRYALTGMGNVHLLFA-RDMRRDTDQEKEKRRKMYERAVEFFDKALQLDPRNAYA 766

Query: 678 ANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPD------VWINLAHVYFAQGNFA 731
           A G  + L      D  KDL T VQ      +F ++ D      V++NL HVY     + 
Sbjct: 767 AQGIAIAL-----VDDRKDLSTAVQ------IFSKIRDSLRDASVYLNLGHVYAELRQYT 815

Query: 732 LAMKMYQNCLRKFYYNTDAQILLYLARTHY---EAEQWQDCKKSLL----RAIHLAPSNY 784
            +++ Y+  L K     DAQIL  L R      + E      K+ L    RA  +AP+  
Sbjct: 816 RSIEHYEAALSKDRAR-DAQILACLGRVWLLKGKQEMSLAAMKTALDYAQRAHSVAPTQA 874

Query: 785 TLRFDAGVAMQKFSAST--LQKTRRTADEVRSTVAELENAVRVFSHLSAASN 834
            L F+      + ++ T  L +T+RTA +V+     L  AV  F  ++ A N
Sbjct: 875 HLEFNVAFVQNQIASLTYSLPETQRTAQDVQDAADGLRTAVETFGRIAQAKN 926


>gi|262302969|gb|ACY44077.1| SH2 domain binding protein [Scolopendra polymorpha]
          Length = 178

 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 78/178 (43%), Positives = 114/178 (64%)

Query: 147 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 206
           A + F  VL    +N+P+LLG+AC+ FN+  Y  +L FYK+AL+ +P+CP A+RLG+G C
Sbjct: 1   ADAQFNFVLNQSPNNIPSLLGKACIAFNKKDYRGALAFYKKALRTNPNCPAAVRLGMGHC 60

Query: 207 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY 266
             KLG+  KAR AF+RALQLD + V ALV LAV++L       IR G++ + +A+     
Sbjct: 61  FLKLGKPDKARFAFERALQLDIQCVGALVGLAVLELNNKTPESIRNGVQMLSKAYATDST 120

Query: 267 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 324
             M LN+LANHFFF   +  V+ L   A+  T +   ++ S Y LAR++H + DY++A
Sbjct: 121 NPMVLNHLANHFFFKKDYQKVQHLALHAIHNTENEAMRAESCYQLARAFHVQSDYDQA 178


>gi|327300897|ref|XP_003235141.1| tetratricopeptide repeat protein [Trichophyton rubrum CBS 118892]
 gi|326462493|gb|EGD87946.1| tetratricopeptide repeat protein [Trichophyton rubrum CBS 118892]
          Length = 1201

 Score =  157 bits (396), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 218/932 (23%), Positives = 392/932 (42%), Gaps = 138/932 (14%)

Query: 2   ACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQ 61
           + V IP    + EV ++L +LP D +++  +L  E+A  + W+IIA  Y KQ +++   +
Sbjct: 32  SAVDIPASTFDSEVEISLQELPDDPTELCTLLDNEKAAKNFWVIIALAYAKQKQIDHAIE 91

Query: 62  ILEEGSSPEIDEYYADVRYERIAILNALGVYYTYL------------GKIETKQREKEEH 109
           IL  G    +         ER+++L    + + YL            G++ ++ + KE +
Sbjct: 92  ILTRG----LASLAHGATKERLSLLG--WICWLYLIKSRQAPRVAPEGQLHSEAKTKEFY 145

Query: 110 FILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK--IVLEADR-------- 159
              AT   N+ASR++   P  ++ +G L + +  ++  S   +   V  ++R        
Sbjct: 146 LQAATATLNEASRLNPAFPPLFLARGVLSILRASLQPPSKPLRPGTVDTSERVESLQQAI 205

Query: 160 ------------DNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGA-IRLGIGLC 206
                        N+ A+LG+A   +  GRY+++LE Y+ AL   PS      R+GIG C
Sbjct: 206 KCFDESAKAFGGRNIMAILGRARASYMLGRYAEALEGYQEALVKMPSMRDPDPRIGIGCC 265

Query: 207 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANE---------AAGIRKGMEK- 256
            ++L    +A+ A+ RAL L+P++  A + LA   L  +          ++  +  M + 
Sbjct: 266 LWQLDFKDQAKVAWNRALSLNPDSKAANILLAAYYLHDSSRHSTSDPEFSSLYKTAMTQY 325

Query: 257 MQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYH 316
            Q+AF++     M      ++F        VE L   A+ +T+     S  +Y LAR  H
Sbjct: 326 TQKAFKLDKEYPMTCATFGSYFLLRKHFPTVEALARKAIELTDVNAIASDGWYLLARKEH 385

Query: 317 SKGDYEKAGLYYMASVKEINKPHEFIFP-YYGLGQVQLKLGDFRSALTNFEKVLEIYPDN 375
           ++GD E+A  YY  S +      +   P  +G  Q+ ++  DF  A    EK+++    N
Sbjct: 386 TEGDPERALEYYNRSDQARGGADKGYPPAKFGAVQMLVRRKDFDGAKFRLEKIIQ-QTKN 444

Query: 376 CETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTA 435
            E +  LG +Y        A E+   A   + + A+A   +  LL S  T    D  K  
Sbjct: 445 PEAMALLGSLY--------ADEVFAAANSKEDKSAEAKKAIS-LLESVRTSWKADKKKLT 495

Query: 436 RT---------LLKKAGEEVPIEVLNNIGVIHF------EKGEFESAHQSFKDALGDGIW 480
                      L + +  +  ++ LN +  +        EK +     Q+  D L + + 
Sbjct: 496 PDESVLLYLARLYETSAPDKSMQCLNQVEEMQLAQIPDDEKPDNVEGEQAMTDILRERLS 555

Query: 481 LTLLDSKT----KTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLE 536
             LL++      +   I+ + +MLQ          E + +  +      T+ +NLAR  E
Sbjct: 556 PQLLNNIGCFLYQADKIEQARTMLQTALNACVQAQERE-DASDTDAYVTTISYNLARTYE 614

Query: 537 QIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNAL 596
                  A  +Y  +L ++ DYV+A  RL  I+  ++               +G+    +
Sbjct: 615 AAGMLDEAKKVYEGLLERHSDYVEANARLTYISLRQD--------------PSGEGAKKM 660

Query: 597 SMLGDLELKNDD------WVKAKETFRAASDATDGK--------------DSYATLSLGN 636
           + L + E  N +      W   K   R A+ A D +              D YA   +GN
Sbjct: 661 TKLYETEASNMEVRALYGWYLNKTKRRVANLAEDHEQRHYKHTLQGYDKHDRYALTGMGN 720

Query: 637 WNYFAALRNEKRAPKLEATH----LEKAKELYTRVIVQHTSNLYAANGAGVVLA-EKGQF 691
             Y    R+ +R  + E        EKA E + + +     N YAA G  + L  ++  +
Sbjct: 721 L-YLLTGRDMRRDGEQEKEKRHKIYEKAVEFFDKALQLDPKNAYAAQGIAIALVDDRKDY 779

Query: 692 DVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQ 751
             +  +F++V++    S       V++NL HV+     F  +++ Y+  L K     DAQ
Sbjct: 780 STAVQIFSKVRDTLRDST------VYLNLGHVFAELRQFTKSIENYEISLSKDRAR-DAQ 832

Query: 752 ILLYLARTHY---EAEQWQDCKKSLL----RAIHLAPSNYTLRFDAGVAMQKFS--ASTL 802
           IL  L R  +   + EQ     K+ L    RA   AP    L F+      + +  A +L
Sbjct: 833 ILACLGRVWFLKGKQEQNLTAMKTALEYAERARSAAPDQIHLEFNIAFVQNEIALLAISL 892

Query: 803 QKTRRTADEVRSTVAELENAVRVFSHLSAASN 834
            + ++++++V   +  L  A+  F  ++++ N
Sbjct: 893 PEAQKSSEDVEEAMNGLTAAIEAFDKIASSKN 924


>gi|262302963|gb|ACY44074.1| SH2 domain binding protein [Prokoenenia wheeleri]
          Length = 178

 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 78/178 (43%), Positives = 110/178 (61%)

Query: 147 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 206
           A + F  VL    +N+P+LLG+AC+ FN+  Y  +L FYK+AL+  P CP  +RLG+G C
Sbjct: 1   ADAQFNFVLNQSPNNIPSLLGKACIAFNKKDYRGALAFYKKALRTKPGCPAXVRLGMGHC 60

Query: 207 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY 266
            YKLG++ KAR AF+RALQLD   V A V LAV++L       IR G++ +  A+ I   
Sbjct: 61  FYKLGKVDKARLAFERALQLDQTCVGAFVGLAVLELNLKTPDSIRNGVQMLSHAYTIDXT 120

Query: 267 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 324
             M LN+LANHFFF   +  V  L   A   T +   ++ S Y LAR++H +GD+++A
Sbjct: 121 NPMLLNHLANHFFFKKDYAKVXHLALHAFHNTENEAMRAESCYQLARAFHIQGDFDQA 178


>gi|262302883|gb|ACY44034.1| SH2 domain binding protein [Armillifer armillatus]
          Length = 173

 Score =  156 bits (395), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 78/173 (45%), Positives = 109/173 (63%)

Query: 147 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 206
           A + F  VL  +  ++PALLG+AC+ FN+  Y  +L  YK+AL+ +P+CP A+RLG+G C
Sbjct: 1   ADTQFNFVLNQNSTSIPALLGKACIAFNKKDYRAALALYKKALRTNPNCPAAVRLGMGHC 60

Query: 207 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY 266
             KLG   KAR AF+RAL+LDP+ V ALV LAV++L       IR G++ + RA+ I P 
Sbjct: 61  FLKLGNQEKARLAFERALELDPKCVGALVGLAVLELNCRTVESIRNGVQMLSRAYTIDPT 120

Query: 267 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 319
             M LN+LANHFFF      V+ L   A   T +   ++ S Y LAR++H +G
Sbjct: 121 NPMVLNHLANHFFFKKDFEKVKHLALHAFHNTENEAMRAESCYQLARAFHVQG 173



 Score = 47.0 bits (110), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 59/112 (52%), Gaps = 6/112 (5%)

Query: 357 DFRSALTNFEKVLEIYPDNCETLK-ALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFID 415
           D+R+AL  ++K L   P+    ++  +GH +++LG  EKA+    +A ++DP+   A + 
Sbjct: 31  DYRAALALYKKALRTNPNCPAAVRLGMGHCFLKLGNQEKARLAFERALELDPKCVGALVG 90

Query: 416 LGELLISSDTGAALDAFKTARTLLKKAGEEVPIE--VLNNIGVIHFEKGEFE 465
           L  L ++  T   +++ +    +L +A    P    VLN++    F K +FE
Sbjct: 91  LAVLELNCRT---VESIRNGVQMLSRAYTIDPTNPMVLNHLANHFFFKKDFE 139


>gi|149234838|ref|XP_001523298.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
           YB-4239]
 gi|146453087|gb|EDK47343.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
           YB-4239]
          Length = 1195

 Score =  156 bits (394), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 238/1031 (23%), Positives = 430/1031 (41%), Gaps = 198/1031 (19%)

Query: 4   VYIPVQNSEEEVRVALD-----QLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQ 58
           V +PV+  +    V+LD     +LP+D  +++      +     W+I+A  Y + GK+ +
Sbjct: 22  VDVPVEGGD---VVSLDLTNAEELPQDPQELVLFFTDNKLGKQFWIIVACAYAQLGKLAE 78

Query: 59  FRQI----LEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILA- 113
             Q+    LE     E D+      +E + I     +Y+ Y   ++ +  ++ E+ +LA 
Sbjct: 79  AVQLIKLALETSYFTEEDKK----TFESVLIW----LYFRY-ASVDAQNGDRLENLVLAS 129

Query: 114 -------TQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALL 166
                  T+ YN +     +  S  + +  L + +   ++A   F  VL+ D  N  ALL
Sbjct: 130 SAISSLKTKIYNDSQTSVTNSVSNLLAEAVLAIYQNHDDEAMEIFDRVLKLDHSNCFALL 189

Query: 167 GQACVEFNR-GRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 225
           G+A V  ++   Y+ +L+ Y++ L ++P      RLGIGLC + L     A+Q+++RAL+
Sbjct: 190 GKAHVTLSKLNNYTLALKLYQQVLLLNPVMKPDPRLGIGLCFWFLKDEKMAKQSWERALE 249

Query: 226 LDPENVEALVALAVMDLQA------NEAAGIRKGMEKMQRAFEIYP---YCAMALNYLAN 276
           +DP+N++A + L++  + A      ++   ++   E +Q   +++      +  L  L +
Sbjct: 250 IDPKNIKAKIFLSLTKIYATLNNSLSDEQFLKDYKECLQEVSQLHKGNVTDSTILLVLVS 309

Query: 277 HFFFTGQHFLVEQLTE--TALAVTNHGPTKSHSYYN----------------LARSYHSK 318
           ++F   ++  VE++ +  +   + +   +KS +                   LAR   ++
Sbjct: 310 YYFAKQEYDTVERVVKHISQHIIGDSSVSKSATLITKLSKHQQIVLSECSTWLARVQFAR 369

Query: 319 GDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCET 378
            D+ +A   +  ++K  N  +  +    GLGQ Q   G    A   +E +L    D  E 
Sbjct: 370 EDFTQASKLFQEAIK-FNDQN--LVAKLGLGQSQFNRGSIEEASLTYESILRTNVDCLEA 426

Query: 379 LKALGHIYV-QLGQIEKAQEL----------------LRKAAKID--------PRDAQAF 413
             +LG +Y  Q     + +EL                L  A+K D        P    A+
Sbjct: 427 NYSLGILYAKQQLDSRRKKELAIQVLERYIRLSNNRGLSSASKNDAHMLLNKEPITLNAY 486

Query: 414 IDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKD 473
           + L +L   +D   +L     A    KK G+++P+E+ NN+GV  F K  F  A +SF+ 
Sbjct: 487 LTLSKLYEDTDLNQSLTYLTRAADARKKLGKKIPLEIYNNLGVFKFTKQNFAGAAESFQL 546

Query: 474 ALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHV--ELPWN-KVTVLFN 530
           AL                  D   +  +FK          DG  V  +LP + K+++ FN
Sbjct: 547 AL------------------DELNAATEFKSA--------DGEDVLIDLPQDLKISLSFN 580

Query: 531 LARLLEQIHDTVAASVLYRLILFKYQDYVDAYLR---LAAIAKARNNLQLSIELVNEALK 587
           LAR  E + +   A   Y  ++ +  +Y  A LR   L+ I+++R +       ++E L 
Sbjct: 581 LARSKE-VSNENEAYQTYESLIRECPNYFSAKLRILFLSCISESRLSTDEIKTEIDELLD 639

Query: 588 VN--------------GKYPNALSML--GDLELKNDDWVKAKETFRAASDATDGKDSYAT 631
           +N                +   L M    D+E + D  V+            D  D YA 
Sbjct: 640 LNVLDLEVRSFYGWFVKNFGKKLGMKPDSDVEFQKDTLVE-----------FDKHDCYAL 688

Query: 632 LSLGNWNYFAA--LRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKG 689
           LSL N     A  L+N       +  +  +A ELYT+V+     N+YAA G  +   E  
Sbjct: 689 LSLANIYCVMARDLKNSSSTELKKKNYYIRAIELYTKVLTVDPKNVYAAQGLAIACIENK 748

Query: 690 QFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTD 749
           +     D+  +++++      +    V++NL HV      F  A++ Y+  L ++    D
Sbjct: 749 ESFKGLDILRKIRDS------LNDISVYLNLGHVLCEVKQFGKAIESYELALARYTDGKD 802

Query: 750 AQILLYLARTHYEAEQWQDCKKSLLRAI--------HLAPSNYTLRFDAGVAMQKFSAST 801
            +IL +L R  Y     +   +   RA+        H   S   L F+  +A  +F  + 
Sbjct: 803 VKILSFLGRAWYLRASNEQNLQFFKRALEYSRQALEHTRGSKSALLFN--IAYVQFQIAD 860

Query: 802 LQKTR----RTADEVRSTVAELENAVRVFSHLSAASNLH-------LHG----------- 839
               +    R   ++   +  L++A++    L++    H       L G           
Sbjct: 861 FVSKQPVHHRQPQDISDAIDGLQDAIQTLLQLASEDEKHPPYPKDELRGRANLGSSTLLN 920

Query: 840 -----FDEKKINT-----HVEYCKHLLD---AAKIHREAAEREEQQNRQRQEAARQAALA 886
                 DE K N       ++  KH+ +    AKI  E A  E  + ++ Q A  +AAL 
Sbjct: 921 RLTSALDETKENIASVEQKLQTAKHIREQEKEAKIKEEQARLEMLKEKEAQLAKERAALQ 980

Query: 887 EEARRKAEEQK 897
           E+A++ AEE +
Sbjct: 981 EQAQQWAEEAR 991


>gi|118394721|ref|XP_001029723.1| TPR Domain containing protein [Tetrahymena thermophila]
 gi|89283985|gb|EAR82060.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
          Length = 1093

 Score =  156 bits (394), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 219/959 (22%), Positives = 402/959 (41%), Gaps = 113/959 (11%)

Query: 17  VALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQILEEGSSPEIDEYYA 76
           + + +LP+D          ++  LDLW  IA   ++ G+ E+F  I+    S E+D+   
Sbjct: 14  IDIKELPQDLVKFYAECSTKEISLDLWNRIAISLYENGESEKFNSIMHYIQSIEMDKPIH 73

Query: 77  DVRYERIAILNALGVYYTYLGKIETKQREKEE---HFILATQYYNKASRIDMHEPSTWVG 133
           D    R+   N        L    +K+   E+   +F  A Q  N  SRI   +  T   
Sbjct: 74  DTPSGRVYKRNINNTNIQALIAKASKEESIEQRNNYFQQAIQTLN-TSRIKDVKSLTHSI 132

Query: 134 KGQL-LLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVH 192
           +G +      +V       +     D++++  +LGQA + F    YS +LE++K ALQ +
Sbjct: 133 QGFINFYQNKQVGITQKNLQNACVQDKNDIIDILGQAQIFFFAKDYSKALEYFKEALQKN 192

Query: 193 PSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRK 252
           P  PG  RLG+  C +   +   +++AFQR + LD    EA + LA++  Q  E      
Sbjct: 193 PKLPGRARLGLAYCFFMQKKFELSKRAFQRVIDLDKTVYEAYLGLAILAFQRKEWNVY-- 250

Query: 253 GMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPT------KSH 306
            ++ + +A+E+     + L Y+A  ++    +   +++   A+    + P       K  
Sbjct: 251 -IQNLNKAYELNKSSPLVLYYIAEFYYIQQDNVNTKKMAFQAINNLKNLPKILMDSDKLK 309

Query: 307 SYYNLARSYHSKGDYE--KAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTN 364
           +Y    RS     D+   K+ LY M                  +G    +   +  A   
Sbjct: 310 TYVKQTRS-----DFYDIKSRLYQM------------------IGSCFHREQQYDQAFRR 346

Query: 365 FEKVLEIYPDN-----CETLKALGHIYVQ--LGQIEKA-QELLRKAAKIDPRDAQAFIDL 416
            E++    P+N      E  K L ++  +  LGQ ++  Q+   KA   +P+D +A ++ 
Sbjct: 347 LEEIRNQCPENEKELTFEFFKPLAYLQSKLALGQNKQTQQQYYLKALNYNPQDFEAQLEY 406

Query: 417 GELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALG 476
              L   D   +L  FK A ++L +  E +  E+ NNIGV+      ++ A ++F+ A  
Sbjct: 407 ANNLTDIDAHESLRYFKQALSVLNEKKERINPEIYNNIGVLESHLKNYQKAIEAFEQA-- 464

Query: 477 DGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHR-FENDGNHVELPWNK----------- 524
                           I  +    Q   + +F + ++N+ N +E   +K           
Sbjct: 465 ----------------IKLAVQSNQEGGVNVFSKNYQNNTNEIETDQDKEESETKRKSFL 508

Query: 525 VTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNE 584
            TV FN+A + E +     A  LY+ +L     Y+D+Y+RLA +   + + Q +I+   E
Sbjct: 509 CTVKFNMAAMYEDLKQNENAFSLYQEVLNICPYYLDSYVRLAYLEFKKGSFQNAIKYCEE 568

Query: 585 AL--KVNGKYPN-----ALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNW 637
           AL  K   K  N      L M G +  + DD   A+E F          D+Y+ L +   
Sbjct: 569 ALVKKDEAKSNNVRSDLVLCMKGYIHSQYDDDQSAREAFNLIK-KQGFNDNYSKLFVYYM 627

Query: 638 NYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDL 697
           +Y   +  EKR  +     +    E    ++    +N+ A     VVLAE GQ + +K++
Sbjct: 628 DYEQQI--EKRDNQESQKKIMIIGEKIKEILGLDQTNIQALIVLAVVLAENGQINEAKEI 685

Query: 698 FTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLA 757
           F  ++E    SVF   P++  NL  + + + N+  A+  Y+    K     D  +L  +A
Sbjct: 686 FNSLKENI--SVF---PNILFNLGQIQYLEKNYGEALMNYKKFQEKSSLVKDEYLLTQIA 740

Query: 758 RTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFD----AGVAMQKF--SASTLQKTRRTADE 811
             +   E++ + K  + + I   PS+   R++      + ++K   +A    K +  A  
Sbjct: 741 LCNLHLEKYAEAKTQIKKLILRYPSSVVHRYNYYMIQLIEVEKIFSNADRSLKDKENAFI 800

Query: 812 VRSTVAELENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQ 871
           +     E  +  +       + + H   + ++K     ++   +L+  +  R   E    
Sbjct: 801 ICKRAKEFLDFFKSDQKCKKSRSEHFSTYVKQK---RTDFFNSILEQLETKRMMLESNMP 857

Query: 872 QNRQRQEAARQAALAEEARRKAEEQKKYLLEKRKLEDEQK------------RLRQQEE 918
           Q  +  + ARQ     +   + EE+ +  L+K K+E+E++            R+R+QEE
Sbjct: 858 QFEKMLDEARQKQQQSQGYHQNEEEMEQELKKSKIEEEKRLQELKLEQKFAERIRKQEE 916


>gi|353238582|emb|CCA70524.1| related to RNA polymerase II-associated protein-Laccaria bicolor
           [Piriformospora indica DSM 11827]
          Length = 1125

 Score =  156 bits (394), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 219/1004 (21%), Positives = 418/1004 (41%), Gaps = 177/1004 (17%)

Query: 12  EEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQILEEGSSPEI 71
           +E + + LD L +   D++++L+  +  +  W  +A EY+++G ++  ++I         
Sbjct: 27  QEVITIDLDALDQSTDDVINVLQDARCKVTTWTQLASEYWRRGWLDSAQRIAHAAL---- 82

Query: 72  DEYYADVR--------YERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRI 123
            E++  +R        Y  +A +           K+E+ Q +K  +  L   Y ++A+ +
Sbjct: 83  -EFFKSIRDAQSLSSVYLLMAGIQMDSARAAPKMKLESPQLDKLGNETLKEVYLSEATAL 141

Query: 124 DMHEPSTWVGKGQLLLAKG--------EVEQASSAFKIVLEADRDNVPALLGQACVEFNR 175
            M+  S         L +G         +  A   F+ +L+    N+ AL G+A + + +
Sbjct: 142 -MNYASGAAKSELFFLTRGIHQLSKHSTINDALVTFEGILQGTPTNIVALHGKARIMYMQ 200

Query: 176 GRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV 235
            +Y ++L+ Y+R L++ P+     R+GIGLC ++L    KA++A++R+L+L P +    +
Sbjct: 201 RKYREALQLYQRILRLSPNAQPDPRIGIGLCFWQLDDRSKAKKAWERSLELHPNHWVPQL 260

Query: 236 ALAVMDLQANEAA---------GIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFL 286
            L +  L A++ +             G + ++RAF I        N L+ +F   G+   
Sbjct: 261 LLGLESLNASKDSQRTEEQRHHAYTVGSKHIERAFHINQKNGATANCLSEYFIRRGEARK 320

Query: 287 VEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYY 346
             +L E ++   +     S  +    R  H +G Y+ A  +Y  +    N P   I    
Sbjct: 321 ALKLAERSIQYADSITILSEGHLRAGRVAHLEGRYDDAITHYTNAK---NLPLASI---- 373

Query: 347 GLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI------------YVQLGQIE- 393
           G+ Q  +K G+  +A+   + +L   P+  +  +A+  +              +L Q + 
Sbjct: 374 GIAQCHIKRGETAAAIHVLDTLLN-GPETQQPKEAMIMLASLRAFERPALSSAELAQDKA 432

Query: 394 KAQELLRKAAK---------------IDPR------DAQAFIDLGELLISSDTGAALDAF 432
           KA+ELL +  +               ++ R      D +  +++G L    DT  AL A+
Sbjct: 433 KARELLERVKRHTSQANGTKSNGISAVNNRKPAWMNDLEMHVEIGRLWEREDTAKALLAY 492

Query: 433 KTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYV 492
           + AR + +++       ++NNI V+    G+   A   +++ALG      +L +K     
Sbjct: 493 QDARRISEQSVAGADPRIINNIAVLGHLSGKIAEARALYEEALG------ILANKW---- 542

Query: 493 IDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLIL 552
                                  NH  +     T+L+NLAR+ E   +T  A   Y  +L
Sbjct: 543 ----------------------ANHENMDGMSTTILYNLARVYEDQDETALAKDAYDKLL 580

Query: 553 FKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKA 612
            ++ +YVDA +RLA +  A N    +  ++ +A++      N  +      L   + ++A
Sbjct: 581 GRHPEYVDAKVRLAHMLLASNKPNEAHTILKQAIETQQTNMNLRAYYTHF-LTQSNLLQA 639

Query: 613 KETFRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEK------AKELYTR 666
                 A+   +  D Y T++ G W ++   R  +  P  E T  ++      A E Y R
Sbjct: 640 ALKIVHATLNINKNDLYGTVASG-WLHYQLGREAR--PNNEETMRDRRHKLLYAAEFYER 696

Query: 667 VIVQHTSNLYAANGAGVVLAEK-----------GQFDVSKDL---------FTQVQEA-A 705
            +    S   AA G  +++AE            G  D    L         F +++E  A
Sbjct: 697 ALNLDPSCSVAAQGLAILIAEDAIGMMALKPGAGLEDHETRLANTSDALEYFARIREVMA 756

Query: 706 SGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQ 765
            GSV+        N+ H Y+ +  +  A++ Y+  L+KFY   +  +++ L+R  Y    
Sbjct: 757 DGSVYT-------NMGHCYYMRDEYERAIESYETGLQKFYNGQNTSVMMCLSRAWYAKAT 809

Query: 766 WQDCKKSLLRAIHLA-------PSNYTLRFDAGVAMQKFSAS--TLQKTRRTADEVRSTV 816
                 ++  A+HLA       P + +++++  V  Q+ +    +L  ++RT +E++  +
Sbjct: 810 RDQSFVAMKTALHLAQTAQMLSPGDKSIKYNIAVIEQRAAEMVFSLPVSKRTLEELQEAL 869

Query: 817 AELENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQR 876
               NA R    LS  ++     +D+   +    Y   LL          +  E+++  +
Sbjct: 870 DLATNAQRFLFELSEDTSKGGLPYDKDMASQRHRYLGSLLRKGTEQISQQQEYEKEHHAK 929

Query: 877 QEAAR------------------------QAALAEEARRKAEEQ 896
            EAAR                         AALAEE RRKA E+
Sbjct: 930 LEAARAFRMAEKAAAEAKEKARLEELQREAAALAEE-RRKAREE 972


>gi|67903702|ref|XP_682107.1| hypothetical protein AN8838.2 [Aspergillus nidulans FGSC A4]
 gi|40740936|gb|EAA60126.1| hypothetical protein AN8838.2 [Aspergillus nidulans FGSC A4]
          Length = 1467

 Score =  156 bits (394), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 240/1046 (22%), Positives = 412/1046 (39%), Gaps = 185/1046 (17%)

Query: 2    ACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQ 61
            + + IP    + EV V+L+ LP D +++  +L+ E+A  + W+IIA  Y KQ +++    
Sbjct: 474  SAIDIPASTLDSEVEVSLEGLPDDPTELCTLLENERAAKNFWVIIALAYAKQKQIDHAID 533

Query: 62   ILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGK------------IETKQREKEEH 109
            IL +G    +         E++ +L    V + YL K            + T+ R K+ +
Sbjct: 534  ILNKG----LASVAQGATKEKLGLLG--WVCWLYLLKSREAPRVVSDVGLGTEARTKDYY 587

Query: 110  FILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-----------------VEQASSAFK 152
               AT   N+ASR++   P  ++ +G L L +                   VE    A K
Sbjct: 588  IQQATGILNEASRLNPSFPPLFLARGVLSLLRASLHPPRPVRPGAVDNSERVESLRQALK 647

Query: 153  IVLEADR----DNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGA-IRLGIGLCR 207
               E+ +     N  A+LG+A   +  GRY+++LE Y++ L   P       R+GIG C 
Sbjct: 648  QFDESSKAFGGRNAMAILGRARAHYLLGRYAEALEGYQKVLMRMPGLTDPDPRIGIGCCL 707

Query: 208  YKLGQLGKARQAFQRALQLDPENVEALVALAVMDL-------QANEAAG--IRKGMEK-M 257
            ++LG   +A+ A++RAL L+P++  A + LAV  L         + A G   +  M +  
Sbjct: 708  WQLGFKEQAKAAWERALALNPDSKVANILLAVYYLYDSSRHATTDPAFGSLYKVAMTQYT 767

Query: 258  QRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHS 317
            Q+AF++     M      ++F     +  V+ L   ++  T+     S  +Y L R  H 
Sbjct: 768  QKAFKLDKEYPMTCALFGSYFLLRKAYSTVDTLARKSIENTDVMQIASDGWYLLGRKCHY 827

Query: 318  KGDYEKAGLYYMASVKEINKPHEFIFPY-YGLGQVQLKLGDFRSALTNFEKVLEIYPDNC 376
            +GD  KA  +Y  S +      +   P  +G  Q+Q+   D+  A    EK+++    N 
Sbjct: 828  EGDLAKAAEFYHRSDQARGGGDKGYLPAKFGSVQMQVSNKDYDGAKFQLEKIIQ-QTKNP 886

Query: 377  ETLKALGHIYVQ---------------------LGQIEKAQELLRKAAKIDPRDAQAFID 415
            E +  L  +Y +                     +   E  + L +  +K    D    + 
Sbjct: 887  ECMTLLAALYAEEVFAAQKSGMKEDKSAEAKKAITLFEAVRALWKDESKKITPDESVLVY 946

Query: 416  LGELLISSDTGAALDAFKTARTL-LKKAGEE------------------VPIEVLNNIGV 456
            L  L   +    ++        L L +  +E                  +P ++LNN+G 
Sbjct: 947  LSRLYEQNAPDKSMQCLTQLEELQLAEISDEERPEGLEDEEMKAALRVNLPPQLLNNMGC 1006

Query: 457  IHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGN 516
              ++  +   A   F+ AL      +   S+ +   +D  A +                 
Sbjct: 1007 FLYQSSQLNMARSMFQAALD-----SCARSQEREGELDTDALV----------------- 1044

Query: 517  HVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQ 576
                     T+ +NL R  E       A  +Y  +L ++ DY +A  RL  +A  R+   
Sbjct: 1045 --------TTISYNLGRAFEASDMPDEAKKVYEALLERHSDYTEASARLTYLALRRSPTD 1096

Query: 577  LSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGK---------- 626
               + + +  + +       ++ G        W  +K   RAA+ A D +          
Sbjct: 1097 EGPKKMAKLYETDSTNLEVRALFG--------WYLSKSKKRAANIAEDHEQRHHKHTLQY 1148

Query: 627  ----DSYATLSLGNWNYFAALRNEKRAPKLEATH----LEKAKELYTRVIVQHTSNLYAA 678
                D YA   +GN +   A R+ +R    E        E+A E + + +     N YAA
Sbjct: 1149 FDKHDRYALTGMGNVHLLFA-RDMRRDTDQEKEKRRKMYERAVEFFDKALQLDPRNAYAA 1207

Query: 679  NGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQ 738
             G  + L      D  KDL T VQ  +     ++   V++NL HVY     +  +++ Y+
Sbjct: 1208 QGIAIALV-----DDRKDLSTAVQIFSKIRDSLRDASVYLNLGHVYAELRQYTRSIEHYE 1262

Query: 739  NCLRKFYYNTDAQILLYLARTHY---EAEQWQDCKKSLL----RAIHLAPSNYTLRFDAG 791
              L K     DAQIL  L R      + E      K+ L    RA  +AP+   L F+  
Sbjct: 1263 AALSKDRAR-DAQILACLGRVWLLKGKQEMSLAAMKTALDYAQRAHSVAPTQAHLEFNVA 1321

Query: 792  VAMQKFSAST--LQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGFD-EKKINTH 848
                + ++ T  L +T+RTA +V+     L  AV  F  ++ A N        E++ N  
Sbjct: 1322 FVQNQIASLTYSLPETQRTAQDVQDAADGLRTAVETFGRIAQAKNPPYPAESLEQRANMS 1381

Query: 849  VEYCKHLLDAAKIHREAAEREEQQNRQRQEAA--------------------RQAALAEE 888
                K L  A +  +E  E+   + +Q +EA                     R+  +AEE
Sbjct: 1382 KTIIKQLERALQSQKEYEEKNAAKLQQAREAREAEIRRREEEVRKAEEAERERKQRIAEE 1441

Query: 889  ARRKAEEQKKYLLEKRKLEDEQKRLR 914
             +R  EE ++  L  +K     K+ R
Sbjct: 1442 RQRLVEEAQRLALSGQKRNGPAKKRR 1467


>gi|154299238|ref|XP_001550039.1| hypothetical protein BC1G_11797 [Botryotinia fuckeliana B05.10]
          Length = 904

 Score =  156 bits (394), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 206/910 (22%), Positives = 367/910 (40%), Gaps = 168/910 (18%)

Query: 2   ACVYIPV--QNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQF 59
           + + IPV  ++ ++ V + L+ L  D +++  +L+ E A    W+ +A  Y KQ KV+  
Sbjct: 35  SAIDIPVTGEDDDQAVEIDLEDLLDDPTELCTLLENEGAARTYWMTVALAYAKQKKVDHA 94

Query: 60  RQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQRE-----------KEE 108
            ++L +G S            ER+++L  L   Y +  K   + R            KE+
Sbjct: 95  IEMLTKGQSA-----MRGGNKERLSMLTCLCWMYLWKSKEAPRHRPDSVEHGEEIKTKED 149

Query: 109 HFILATQYYNKASRIDMHEPSTWVGKGQLLL-------------AKGEVEQ--------A 147
              +AT   N ASRI+   P  ++ +G L L             A G ++         A
Sbjct: 150 WLKMATSNLNDASRINPSFPPLFLARGVLQLLRASTRPFPRNNTAPGALDPEKAELLRGA 209

Query: 148 SSAFKIVLEADRD-NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGA-IRLGIGL 205
             +F+  ++A    N+ A+LG+A   ++ G+Y+++LE Y+ AL+  P       R+GIG 
Sbjct: 210 QKSFEDAIKASHGRNMLAVLGKARAAYSMGKYAEALEGYQEALRSMPDLVDPDPRIGIGC 269

Query: 206 CRYKLGQLGKARQAFQRALQLDPENVEALVALA--VMDLQANEAAG-------IRKGM-E 255
           C ++LG    A+ A++R+L+++P++  A + LA   +D  A+            +K M E
Sbjct: 270 CFWQLGFKEDAKAAWERSLEINPDSKVANILLAQFYLDQSAHVPTNSPEFIQLYKKAMTE 329

Query: 256 KMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSY 315
             QR+++      +     A +F        VE L + A+  T+     S  +Y LAR  
Sbjct: 330 YTQRSYKADKDMPLTCATFAGYFLSRKSMPNVEALAQKAIQYTDVNAIASDGWYLLARKE 389

Query: 316 HSKGDYEKAGLYY-MASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPD 374
           H   +YEKA  YY  A          ++   +G  Q+ +  GDF  A    EK+++    
Sbjct: 390 HFDDNYEKALDYYGRADDARGGADRGYMPAKFGAAQLSVLKGDFGEAKLRLEKIIQ-QSK 448

Query: 375 NCETLKALGHIYVQ---------------------LGQIEKAQELLRKAAKIDPRDAQAF 413
           N E +  LG +Y +                     +G +E  +   +   K    DA   
Sbjct: 449 NIEAMILLGTLYAEEVFSSQESGVKEDKTTEYKKAVGYLENVRTAWKDPKKNLVPDASVL 508

Query: 414 IDLGELLISSDTGAALDAFKTARTL----------LKKAGEEV----------PIEVLNN 453
           ++L  L  +     +L   +    +           ++ G+EV            ++LNN
Sbjct: 509 LNLARLYETEQPEKSLQCLQQVEQIEFDQIPAADKPEETGDEVAYKNTMRENLSPQLLNN 568

Query: 454 IGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFEN 513
           IG  +++  +++ A + F+ AL        + +  K   +D  A +              
Sbjct: 569 IGCFYYQSEKYDLAREMFQAALN-----ACVKAGEKLEGMDTDALV-------------- 609

Query: 514 DGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARN 573
                       T+ FNL R  E       A  +Y  +L ++ DY DA  RLA IA  R+
Sbjct: 610 -----------TTISFNLGRTYEASGMPDEAKTVYEGLLGRHSDYTDAKTRLAYIALRRD 658

Query: 574 NLQLSIELVNEALKVNGKYPNALSMLGDLELKN-DDWVKAKETFRAASDAT--------- 623
             +   + V+   K +           DLE++    W   +   R  S            
Sbjct: 659 RTEEGPKAVSALYKESS---------ADLEVRALYGWYLGRMHSRKRSSNVNEDPEYRHY 709

Query: 624 -------DGKDSYATLSLGNWNYFAA---LRNEKRAPKLEATHLEKAKELYTRVIVQHTS 673
                  D  D YA + +GN N  AA    R+ +   +  +    KA E + + +     
Sbjct: 710 KHTLQQYDKHDRYALIGMGNLNLMAAREMRRDSESDKQARSKTYTKAVEFFDKALQLDPK 769

Query: 674 NLYAANGAGVVLAE-KGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFAL 732
           + YAA G  + L E K     +  +F +V++       V+ P V++NL H++     ++ 
Sbjct: 770 SAYAAQGIAIALVEDKKDSKTALPIFLKVRDT------VKDPSVFVNLGHIFAESRQYSK 823

Query: 733 AMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSL-------LRAIHLAPSNYT 785
           A++ Y+  L K   + D+ IL  L RT     +      S        L+A+ ++P    
Sbjct: 824 AIEHYEAALTKDRAH-DSHILTCLGRTWLSKGKGDKSLSSFKSALDYSLKALEISPEQVH 882

Query: 786 LRFDAGVAMQ 795
            +F+    ++
Sbjct: 883 YKFNVAFKLR 892


>gi|409045340|gb|EKM54821.1| hypothetical protein PHACADRAFT_258943 [Phanerochaete carnosa
            HHB-10118-sp]
          Length = 1101

 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 220/1029 (21%), Positives = 421/1029 (40%), Gaps = 174/1029 (16%)

Query: 10   NSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQ----------- 58
            + +E + V LD L  +  D+L++L+  Q+ + +W  +A EY+++G ++            
Sbjct: 20   SGQEVIAVDLDNLDANPDDLLEVLRESQSKVWVWTKLATEYWRKGNLDAAEKLARGADDW 79

Query: 59   FRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFIL-ATQYY 117
            F+   + GS P +    A+++  R      L +  +   + + +Q   + H+   ATQY 
Sbjct: 80   FQANGQRGSLPPVYSLLANIQLARARKAPKLVLQDSR--QDDMRQEHAQAHYHREATQYM 137

Query: 118  NKASRI----------DMHEPS--TWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPAL 165
            N   +              + S  T++ +G + L+   ++ A   F  VL     N+ AL
Sbjct: 138  NLGEKAIAQAAIEGAGSEKDTSILTFLTRGIIQLSTRNMDDALRTFDGVLVTKSTNLVAL 197

Query: 166  LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 225
            LG+A + + + ++  +L  ++  L+ +P+C    R+GIGLC + + Q  +A+ A++R+++
Sbjct: 198  LGKARILYAKRQFPQALRIFQDVLRYNPNCVPDPRIGIGLCFWAMDQKARAKAAWERSVE 257

Query: 226  LDPENVEA--LVALAVMDLQANEAAGIRK-------GMEKMQRAFEIYPYCAMALNYLAN 276
            ++P    A  L+ L  ++   NE     +       G   +++AF      + A N L  
Sbjct: 258  VNPSQWPAQLLLGLEAINSSKNENQSEEERRQEFLFGTRLIEKAFNANQKNSAASNALCE 317

Query: 277  HFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEIN 336
             F   GQH    +L E  +   +     +  Y    R    +G + +A  ++  + K   
Sbjct: 318  LFLRKGQHKRALKLAERTIQFADTLTVLTDGYIRAGRVLQQEGSHSEAQKHFTVANK--G 375

Query: 337  KPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYV--------- 387
            +P   +    GL Q QLK  +  +A+   + +L+   ++  + +A   +           
Sbjct: 376  QPTN-VLAAIGLAQTQLKNEEAFAAIHTLDFLLQAQNNSGRSAEAAAMLASLRAHPRPGV 434

Query: 388  ----QLGQIEKAQELLRKAAKI--------------DP----------RDAQAFIDLGEL 419
                Q    ++A+EL  +  K+               P           D Q   ++ +L
Sbjct: 435  SNSDQAKDKQRARELFDQVCKMLNLPEQAHTILNGHAPALTRSQRQVAEDVQLHAEIAKL 494

Query: 420  LISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGI 479
                D G    A + A  L +  G   P  ++N++  +    G  + A   ++ AL D  
Sbjct: 495  FYQEDVGRVERACQEAVRLSEATGHPDP-RLINDLAALRHLSGRLDEARSMYERALTDA- 552

Query: 480  WLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIH 539
                  S   T   D+ A+                           ++L+NLAR+ E   
Sbjct: 553  ------SSQGTRESDSMAT---------------------------SILYNLARVYEDQG 579

Query: 540  DTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSML 599
            + + A   Y  +L ++ +YVDA +RLA +    N    + EL+ ++L       N  +  
Sbjct: 580  EEITAKDAYEKLLSRHPEYVDAKIRLAQMLVDLNRHNDAHELLKQSLASQNSNLNLRAFY 639

Query: 600  GDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPK---LEATH 656
                +++     AK+   +     D  D Y+  + G   Y  A  +    PK        
Sbjct: 640  THFLIQSGLPKPAKDFVFSTLKDHDKHDIYSLCAAGWIQYHQARESRDATPKGIEERKQG 699

Query: 657  LEKAKELYTRVIVQHTSNLYAANGAGVVLAEK------------GQFDVSK--------- 695
              ++ E Y + +       +AA G  +V AE             G  + SK         
Sbjct: 700  FRRSAEFYEKALHLDPMCAFAAQGLAIVTAEDALGTLGGSLGPVGPDEASKRVKNAREAL 759

Query: 696  DLFTQVQEA-ASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILL 754
            D+F +V+E+   GSV+        N+ H Y+A   +  A++ Y+   RKFY N +  +LL
Sbjct: 760  DVFAKVRESLDDGSVYS-------NMGHCYYASDEYDRAIESYETASRKFYNNHNVSVLL 812

Query: 755  YLARTHY---EAEQWQDCKKSLLR----AIHLAPSNYTLRFDAGVAMQKFSASTLQ--KT 805
             L R+ Y     +Q      + LR    A+HL P +  + ++  +  QK +   L     
Sbjct: 813  CLCRSWYAKANKDQSFAAMTTALRYAQQALHLHPHDKAITYNIAMIEQKAAEMLLSVPPA 872

Query: 806  RRTADEVRSTVAELENAVRVFSHLSAASNLHL----------HGFDE---KKINTHV--- 849
            +R+  E+R  + + ++A ++F  L+A  +  L            + E   ++ + H+   
Sbjct: 873  KRSLMELRRAIEQAQHAQKLFQSLAADKSNQLPYSTDIADQRRKYGESVLRRCDDHLATQ 932

Query: 850  -----EYCKHLLDAAKIHREAAEREEQQNRQRQEAARQAA--LAEEARRKAEEQKKYLLE 902
                 E    L +A +  +E  ++++Q   +R E  RQ +  L EE +R  EE  ++ LE
Sbjct: 933  RLYESETQAKLEEARRKRQEDKDKQDQIELERLEKIRQDSEKLTEERKRAREEALRWTLE 992

Query: 903  KRKLEDEQK 911
             R  +DE++
Sbjct: 993  HRDSDDEKE 1001


>gi|262302905|gb|ACY44045.1| SH2 domain binding protein [Craterostigmus tasmanianus]
          Length = 178

 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 78/178 (43%), Positives = 112/178 (62%)

Query: 147 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 206
           A + F  VL    +N+P+LLG+AC+ FN+  Y  +L FYK+AL+ +P CP A+RLG+G C
Sbjct: 1   ADAQFNFVLNQSPNNIPSLLGKACIAFNKKDYRGALAFYKKALRTNPRCPAAVRLGMGHC 60

Query: 207 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY 266
             KL +  KAR AF+RALQ+D + V ALV LAV++L       IR G++ + RA+ I   
Sbjct: 61  FIKLAKQDKARLAFERALQMDIQCVGALVGLAVLELNNKTPESIRNGVQMLSRAYAIDAT 120

Query: 267 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 324
             M LN+LANHFFF   +  V+ L   A   T +   ++ S Y LAR++H + DY++A
Sbjct: 121 NPMVLNHLANHFFFKKDYQKVQHLALHAFHNTENEAMRAESCYQLARAFHVQEDYDQA 178


>gi|255731362|ref|XP_002550605.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
 gi|240131614|gb|EER31173.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
          Length = 1081

 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 213/890 (23%), Positives = 372/890 (41%), Gaps = 133/890 (14%)

Query: 20  DQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQILEEGSSPEIDEYYADVR 79
           ++L  D SD++ +L  + +P   W+IIA  Y K GKVEQ  + ++   +    +    + 
Sbjct: 37  EELLDDPSDLIQLLTDQSSPKKYWIIIASAYAKIGKVEQSMKFIKAALNLSYFDNNDRIT 96

Query: 80  YERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKAS-RID-------MHEPSTW 131
           +E   I       + YL  + +   EK+++  LA Q  +K + +I        ++  S  
Sbjct: 97  FESFII-------WLYLQNV-SLGIEKDQNLSLARQGISKLTFKIQNDRETRPLNSISNL 148

Query: 132 VGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGR-YSDSLEFYKRALQ 190
           +    L L +   + AS   + +L+ +  N  ALL +A    N+ + Y+ +L+ +++ L 
Sbjct: 149 LCSAVLNLYESNNDHASEIAEQILKINSSNAFALLVKAQSLLNKSKNYAHALKLFQQVLI 208

Query: 191 VHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGI 250
           ++P      RLGIGLC + L     A ++++R+L+LDP N+++ + L +          +
Sbjct: 209 MNPMMKPDPRLGIGLCFWFLKDEKLAIKSWERSLELDPSNIKSRIFLNLAKFHNTFTTSL 268

Query: 251 RKGMEKMQRAFEIYPYC--------------AMALNYLANHFFFTGQHFLVEQLTETAL- 295
                  +   E Y  C              A  L  LA H+F   ++ +V ++ +  + 
Sbjct: 269 SD-----EEFLENYKNCLQELSKIQKSSINDATVLLTLAAHYFARDEYDVVSKIIKKIVT 323

Query: 296 AVTN----------------HGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPH 339
           +VT                      S     L R   SKGD+ ++  Y+  ++K +N   
Sbjct: 324 SVTGSDNIIKFSISSSISKYEASVLSQCATWLGRIEFSKGDFTQSSKYFQDAIK-LNDND 382

Query: 340 EFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQ 396
             I    GLGQ Q   G    A+  FEK+L    +  E   +LG +Y +    +K   A 
Sbjct: 383 --IVAKLGLGQSQYNRGSLEEAIITFEKILNSNVNCLEANYSLGVLYSKQDSPKKKELAI 440

Query: 397 ELLRKAAKI----------DPRDAQAFIDLGELL-ISSDTGAALDAFKTARTLLKKAGEE 445
            +L +  ++          +P    A++ L EL     D   AL     A    K   ++
Sbjct: 441 SVLERYIRLSNNRGDSSSREPVATNAYLILSELYEDKGDMNQALTYLNKAVEARKYVDKD 500

Query: 446 VPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDM 505
           V +EV NNIGV  F K  + SA ++F+ A                 V   + +  +  D 
Sbjct: 501 VSLEVYNNIGVFQFMKQNYTSASENFQVA-----------------VDKLNGAEFKSPDG 543

Query: 506 QLFHRFENDGNHVELPWN-KVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLR 564
            L          ++LP + K T+ FNLAR  E I +   A  +Y  ++ +  +Y  A LR
Sbjct: 544 DLL---------IDLPQDLKTTLTFNLARTKE-ITNQDEALTIYESLIQECPNYFSAKLR 593

Query: 565 ---LAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLG--------DLELKND-DWVKA 612
              L  I   +   ++  E ++E L++N       S  G         + L  D D    
Sbjct: 594 ILFLNCITDKKTKQEIKDE-IDELLQLNASDLEIRSFYGWFIKNFAKKVHLSQDADTTLQ 652

Query: 613 KETFRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHT 672
           KET        D  D YA +SL N  Y    R+ K + + +  +  +A EL+T+V+    
Sbjct: 653 KETLM----EYDSHDCYALISLANI-YCIMARDTKGSEEKKRKYYLRAIELFTKVLSLDP 707

Query: 673 SNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFAL 732
            N+YAA G  +   E  Q +   D+  +++++ +         V++NL HV     NF  
Sbjct: 708 KNVYAAQGLAIAFIENKQANKGLDILRKIRDSLND------ISVYLNLGHVLCQLKNFGK 761

Query: 733 AMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHL---------APSN 783
           A++ Y+  L ++    D +IL +L R  Y     +     L +A+           A S 
Sbjct: 762 AIENYELALARYTDGNDTKILSFLGRAWYLRGTSESNLPYLKQALEYAQKAVEASKASSK 821

Query: 784 YTLRFDAG-VAMQKFSASTLQK-TRRTADEVRSTVAELENAVRVFSHLSA 831
             L ++   +  Q   A T Q   +R  +E+   +A L   + + + LS+
Sbjct: 822 AALLYNVSFIQFQIADAITKQSVNQRVVEEIEEAIAGLNAGIDILTKLSS 871


>gi|254572335|ref|XP_002493277.1| Component of the Paf1p complex [Komagataella pastoris GS115]
 gi|238033075|emb|CAY71098.1| Component of the Paf1p complex [Komagataella pastoris GS115]
 gi|328352706|emb|CCA39104.1| RNA polymerase-associated protein CTR9 homolog [Komagataella
           pastoris CBS 7435]
          Length = 1044

 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 227/973 (23%), Positives = 407/973 (41%), Gaps = 141/973 (14%)

Query: 6   IPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQILEE 65
           IP+++ +E V +  ++   D S +  +L++E A  DLWL  A+ +  +G +   ++I+ +
Sbjct: 28  IPLKSGDEVVTIDFNE-DVDVSQLCVLLESENARPDLWLSAAKVFVSKGNIAGSQEIIRK 86

Query: 66  GSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDM 125
                +     D      ++ +    + + +  + T  RE ++    A+     ++ +D 
Sbjct: 87  ALQSNV---ILDSSASVTSLFHNFSFWLSLMEYVSTNSRE-DQFLEYASNSLQASNSLDS 142

Query: 126 HEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFY 185
                 +G G L       ++A   F  +L+    N+ A+LG+A + + R +YS +LE Y
Sbjct: 143 GLILNGIGNGVLYAKSRRYDEALKEFDNLLKKKSTNILAILGKAQILYKRQKYSQALELY 202

Query: 186 KRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPE---NVEALVALAVMDL 242
           ++AL ++P      RLGIGLC + L     A QA+  +L++ P+   N + L+ LA  D 
Sbjct: 203 QKALTINPLIVPDPRLGIGLCFWHLNNKQLAEQAWHNSLKVHPQNNLNTKILICLAKFDY 262

Query: 243 QANEA-------AGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETAL 295
             NE+       A  R+ +E +    +      + L  LA+++F    +  VE+L    L
Sbjct: 263 CFNESKDDDEFTALYRESLEFLHSCLKEDAKHPLLLMVLASYYFSKEDYEKVEKLCNLVL 322

Query: 296 AVTNHGPT-KSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLK 354
              +      S S++ LAR  + K DY +A   +  +    N          G  Q  + 
Sbjct: 323 KENSRNAAFVSASHFWLARVAYHKEDYVQAQKQFKQAEDSQNSN---TLAKLGYAQCLIA 379

Query: 355 LGDFRSALTNFEKVLEIYPD--NCETLKALGHIYVQLGQ-IEKAQELLRKAAKID----- 406
             +   A    EK  +   D  + E +  LG IY Q G+   KA   L K   +      
Sbjct: 380 RNEVGDATIYLEKFFKENQDSKSSEMMLLLGIIYSQSGKSYYKAIIFLEKYVAVCQEENY 439

Query: 407 PRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFES 466
           P   +A++ L  +  + D   ALD    A  +L   G++  + VLNN+G+ HF +     
Sbjct: 440 PILPEAYLVLSRVYENKDLNVALDYLMKANDIL---GDKANVYVLNNLGIYHFFRNNVSQ 496

Query: 467 AHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNK-- 524
           +   F  +L                                        N+V  P NK  
Sbjct: 497 SSDFFAQSL-------------------------------------EALNNVS-PQNKEA 518

Query: 525 --VTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDA---YLRLAAIAKARNNLQLSI 579
             +T+ +N AR +E++ +   A  LY  ++ K   Y      Y+ L A+    NN     
Sbjct: 519 LSITLHYNKAR-VEEVSNQSEAEKLYSKLMEKCPGYTSNKIRYIYLLALKSNGNNYADVQ 577

Query: 580 ELVNE---ALKVNGKYPNALSMLG-------DLELKNDDWVKAKETFRAASDATDGKDSY 629
           +L+++    L+V   Y   L   G       DLE ++      K+T        D  D Y
Sbjct: 578 QLLDDFPSDLEVRSFYGWFLKRYGRKNGLKQDLESQH-----HKDTLI----NYDKHDCY 628

Query: 630 ATLSLGNWNYFAALRNEKRAPKLEATHLE-----KAKELYTRVIVQHTSNLYAANGAGVV 684
           A LSLG  N +A +  E +    +   ++     +A + Y +V+     N+YAA G  ++
Sbjct: 629 ALLSLG--NIYATIAREMKVTDQKQNEIKRQQYLRAAQFYHKVLSIDPKNIYAAQGIAII 686

Query: 685 LAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKF 744
            ++K +  ++ ++F +V++       VQ    +INL H +     F  A++ Y   L KF
Sbjct: 687 FSDKERTGLALEIFKKVRDT------VQDLGTFINLGHCFMEAKQFGKAIESYTIALEKF 740

Query: 745 YYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNY------TLRFDAGVAMQKFS 798
               D+++L+ + R  Y    ++    +  +A+ ++   Y       LRF+  +   +F 
Sbjct: 741 SNGMDSKLLVLIGRAWYHRGFYEKSMDAYKKALEVSEQAYQLSKLPALRFN--IVFIQFQ 798

Query: 799 AS----TLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKH 854
            +    +L  T+R    + + ++ L +A++    L+          D K   T       
Sbjct: 799 IADFVKSLPNTQRDLTTLENALSGLNDAIKSLLKLAELEQPPYPSEDLKARATM------ 852

Query: 855 LLDAAKIHREAAEREEQQNRQRQEAARQAALAEEARRKAEEQKKYLLEKRKLEDEQKRL- 913
               +   R   ER   Q++Q  E + Q  L   ARRK +     L E+++LE EQ+RL 
Sbjct: 853 ---GSNTLRNQLER-AIQDQQDYEMSIQEKL-RTARRKQQ-----LDEEKRLEQEQRRLE 902

Query: 914 ----RQQEEHFQR 922
               RQ+ E  +R
Sbjct: 903 EARKRQEAELIKR 915


>gi|346971338|gb|EGY14790.1| tetratricopeptide repeat protein [Verticillium dahliae VdLs.17]
          Length = 1150

 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 209/863 (24%), Positives = 353/863 (40%), Gaps = 154/863 (17%)

Query: 2   ACVYIPVQNSEEE--VRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQF 59
           + + +PV    E+  V + L+ L  D +++  +L+ E+A    W+ +A  Y KQ  ++  
Sbjct: 26  SAIDVPVHGEAEDEAVEIDLEALFDDPTEVCTLLENERAARTYWMTVALAYAKQKNIDHA 85

Query: 60  RQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQR-----------EKEE 108
            ++L  G +   D    +   E+++++  L   + YL K+    R           + +E
Sbjct: 86  IEMLVRGGNSMRD----NTPREKLSLIGCL--CWMYLWKVREAPRLPPDGVPASEAKTKE 139

Query: 109 HFI-LATQYYNKASRIDMHEPSTWVGKG--QLLLAKGEVEQASSAFKI----------VL 155
           H++ LAT   N ASRI+   P  ++ +G  QLL A  ++ +A+   K+           L
Sbjct: 140 HYLQLATSTLNNASRINHAFPPLFLARGVLQLLRASLQIPKATGLGKLDNEKADLLRAAL 199

Query: 156 EADRD--------NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGA-IRLGIGLC 206
           +A  D        N+ A++G+A   F+ G++ +SL  Y+  L   P       R+GIG C
Sbjct: 200 KAFEDAIRVSQGKNMLAVMGKARALFSLGKFPESLACYQEVLGKMPDLVDPDPRIGIGAC 259

Query: 207 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQA------NEAAGIR---KGM-EK 256
            ++LG    AR A++R L+++P++    + L +  L A      N    IR   K M E 
Sbjct: 260 FWQLGFKDDARSAWERCLEINPDHKVGNILLGLYYLDASGHVPTNSPDFIRLYKKAMTEY 319

Query: 257 MQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYH 316
            Q++F++     +     AN+F    Q   V+ L   A+  T+     S  +Y LAR  H
Sbjct: 320 TQKSFKLDKNMPLTCATFANYFLSRKQLGTVDTLAHKAIQYTDVNAIASDGWYLLARKEH 379

Query: 317 SKGDYEKAGLYYMASVKEINKPHEFIFP-YYGLGQVQLKLGDFRSALTNFEKVLEIYPDN 375
            +GD  KA  YY  +            P  +G  Q+ +  GD   A    EK+++    +
Sbjct: 380 HEGDPSKASDYYRRADDARGGADRGYLPAKFGAAQLSVMRGDLAEAKLTLEKMVQ-QSKH 438

Query: 376 CETLKALGHIYVQ---------------------LGQIEKAQELLRKAAKIDPRDAQAFI 414
            E L  LG +Y +                     +G +E  +   R + K    DA   +
Sbjct: 439 HEALVLLGTLYAEEVFANQDLDAKEDKSAETKKAIGLLESVRGAWRDSKKNLNPDAAVLL 498

Query: 415 DLGELLISSDTGAALDAF-------------------KTARTLLKKAGEE-VPIEVLNNI 454
           +L  L  +     AL                       T     KKA    +P ++LNNI
Sbjct: 499 NLARLYEAEHPDKALQCLLQVEQLEMDLVSAADRPPPDTDEAETKKALRRFLPPQLLNNI 558

Query: 455 GVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFEND 514
           G  + +    E A + F+ AL   + L   D        DA    L              
Sbjct: 559 GCFYSQSERHEQASELFEAALDACMKLGEKDE-------DADVDALV------------- 598

Query: 515 GNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNN 574
                      T+ FNL R  E       A  +Y  +L ++ DY DA +RLA I   +  
Sbjct: 599 ----------TTISFNLGRSYESRGMLDDAVKVYEELLKRHDDYTDARVRLAYIKLRKFP 648

Query: 575 LQLSIELVNEALKVN--------------GKYPNALSMLGDLELKNDDWVKAKETFRAAS 620
            +   E V++  K N              GK P +    G++  ++D++   K T R   
Sbjct: 649 HKEGPEAVSKLYKENARDLEVRALYGWYLGKVP-SRKRSGNIN-EDDEFRHYKHTLR--- 703

Query: 621 DATDGKDSYATLSLGNWNYFAA--LRNEKRAPKLEATHL-EKAKELYTRVIVQHTSNLYA 677
              D  D YA +  GN +   A  +R E  + K + + +  KA E + + +     N YA
Sbjct: 704 -DHDKHDRYALVGAGNLHLLTAREMRRESDSDKAKRSAMYTKAVEFFEKALSLDPLNAYA 762

Query: 678 ANGAGVVLAE-KGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKM 736
           A G  + L E +  +  +  +F ++++       V+   V++NL H+Y     ++ A++ 
Sbjct: 763 AQGIAIALVEDRKDYKTALGIFVKIRDT------VKDAHVFVNLGHIYAELRQYSKALEN 816

Query: 737 YQNCLRKFYYNTDAQILLYLART 759
           Y+  L K   + D  IL  L RT
Sbjct: 817 YETALSKEGKSNDPVILSVLGRT 839


>gi|262302887|gb|ACY44036.1| SH2 domain binding protein [Acheta domesticus]
          Length = 173

 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 76/173 (43%), Positives = 109/173 (63%)

Query: 147 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 206
           A + F  VL    +N+P+LLG+AC+ FN+  Y  +L FYK+AL+ +P+CP A+RLG+G C
Sbjct: 1   ADAQFNFVLNQSPNNIPSLLGKACIAFNKKDYRGALAFYKKALRTNPNCPAAVRLGMGHC 60

Query: 207 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY 266
             KLG   KAR AF+RALQLD + V ALV LA++ L   +   IR G++ + +A+ I   
Sbjct: 61  FMKLGNQDKARLAFERALQLDNQCVGALVGLAILKLNQQQPESIRTGVQMLSKAYTIDST 120

Query: 267 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 319
             M LN+LANHFFF   +  V+ L   A   T +   ++ S Y LAR++H +G
Sbjct: 121 NPMVLNHLANHFFFKKDYSKVQHLAMHAFHNTENDAMRAESCYQLARAFHVQG 173


>gi|358387075|gb|EHK24670.1| hypothetical protein TRIVIDRAFT_31492 [Trichoderma virens Gv29-8]
          Length = 1201

 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 217/951 (22%), Positives = 386/951 (40%), Gaps = 179/951 (18%)

Query: 2   ACVYIPVQNSEEE--VRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQF 59
           + + IPVQ  +E+  V + L+ L  D +++  + + E A    W+ +A  Y KQ K++  
Sbjct: 31  SAIDIPVQGDQEDEAVEIDLEDLVDDPTELCTLFENEHAAKTYWMTVALAYAKQRKIDHA 90

Query: 60  RQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETK----------QREKEEH 109
            ++L  G     +   +    ++++++  L   Y +  +   +           + KE +
Sbjct: 91  IEMLIRGG----NAIQSGNPRDKVSMICCLCWMYLWKSREAPRVAPDGVHVAEAKTKEYY 146

Query: 110 FILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVE------------------QASSAF 151
             LAT   N A+R++   P  ++ +G LLL +  ++                   A+ AF
Sbjct: 147 LQLATSSLNDAARLNPSFPPIFLARGVLLLLRASLQGPSKTAGGLGTEKSELLKNAAKAF 206

Query: 152 KIVLEADR-DNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSC--PGAIRLGIGLCRY 208
              L   +  N+ AL+G+A   F+  +Y ++L  Y+  LQ  P    P   R+GIG C +
Sbjct: 207 DDALRVSQGKNMLALMGKARTLFSMHKYPEALATYQDVLQKRPDLVDPDP-RIGIGCCFW 265

Query: 209 KLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKG----------MEKMQ 258
           +LG    A+ A++R L+++P++    + L +  L A+    +             +E  Q
Sbjct: 266 QLGFKEDAKVAWERCLEINPDSKVPNILLGLYYLDASGHVPVNSDEFLKLYKTAMIEYTQ 325

Query: 259 RAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSK 318
           ++F++     +  +  A +F         ++L   A+  T+     S  +Y LAR  H  
Sbjct: 326 KSFKLDKEVPITCSTFAGYFLSRKAWDNADKLAHKAIQYTDVNAVASDGWYLLARKAHYN 385

Query: 319 GDYEKAGLYYMASVKEINKPHEFIFP-YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCE 377
           GD E+A  YY  +            P  +G+ Q+ +   D   A    EK+++    N E
Sbjct: 386 GDLERASDYYRRADDARGGTETGYLPAKFGVAQLSVMKNDLGEAKLRLEKIIQ-QSKNHE 444

Query: 378 TLKALGHIYVQ--------------LGQIEKAQELL---RKAAKIDPR-----DAQAFID 415
            +  LG IY +                +++KA  LL   R + K DP+     DA   ++
Sbjct: 445 AMILLGTIYAEEIFTSQNSDSKEDRSAEMKKAIALLEGVRNSWK-DPKKALSPDASVLLN 503

Query: 416 LGELLISSDTGAALDAFKTARTL-LKKAGEE------------------VPIEVLNNIGV 456
           L  L  + +   AL   +    L L++  E                   +P ++LNNIG 
Sbjct: 504 LARLYETENPEKALQCLQQVEQLELEQIPESERPTDVPEAEIQAALRKFLPPQLLNNIGC 563

Query: 457 IHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGN 516
            H +  + + A + F+ ALG       + +  K   +D  A +                 
Sbjct: 564 FHSQAEKHDLASELFEAALG-----ACMRAGEKDPTMDTDALV----------------- 601

Query: 517 HVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQ 576
                    T+ FNL R  E    T  A  +Y  +L ++ DY DA  RLA I K R N  
Sbjct: 602 --------TTISFNLGRSYEARGLTDKAVEVYEGLLNRHDDYTDARTRLAYI-KLRKN-- 650

Query: 577 LSIELVNEALKVNGKYPNALSML-----GDLELKN-DDWVKAK-ETFRAASDAT------ 623
                       N + P+A++ L      DLE++    W   K  + +  ++ T      
Sbjct: 651 -----------PNKEGPDAVAKLYQENTADLEVRALYGWYLGKVHSRKRPANITEDHEFR 699

Query: 624 ---------DGKDSYATLSLGNWNYFAA----LRNEKRAPKLEATHLEKAKELYTRVIVQ 670
                    D  D YA + +GN     A       E+   K  AT+  KA E + + +  
Sbjct: 700 HYKHTLQNYDKHDRYALVGMGNLYLLQAREMRRETEQEKQKRSATYC-KAVEFFEKALSL 758

Query: 671 HTSNLYAANGAGVVLAE-KGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGN 729
              N YAA G  + L E K  +  +  +F +V++    S       +++NL H++     
Sbjct: 759 DPKNAYAAQGIAIALVEDKRDYKTALTIFNKVRDTVKDS------HLYVNLGHIFAELKQ 812

Query: 730 FALAMKMYQNCLRKFYYNTDAQILLYLART-------HYEAEQWQDCKKSLLRAIHLAPS 782
           F+ A++ Y+  L K   + D  IL  L RT         + + +    +   +A+ +AP 
Sbjct: 813 FSKAIEHYEIALSKDGKSNDPVILSCLGRTWLNRGRADRDVDSYIKALECAKKALEVAPD 872

Query: 783 NYTLRFD-AGVAMQKFSA-STLQKTRRTADEVRSTVAELENAVRVFSHLSA 831
               +F+ A V +Q  +    L + RRTA+++      LE A+     ++A
Sbjct: 873 QIHYQFNVAFVQIQLVTTIQGLPENRRTAEQLEEASEGLEAAIESLDKIAA 923


>gi|261189494|ref|XP_002621158.1| conserved hypothetical protein [Ajellomyces dermatitidis SLH14081]
 gi|239591735|gb|EEQ74316.1| conserved hypothetical protein [Ajellomyces dermatitidis SLH14081]
          Length = 1246

 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 222/962 (23%), Positives = 380/962 (39%), Gaps = 200/962 (20%)

Query: 2   ACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQ 61
           + + IP    + EV ++L++LP D +++  +L  E+A  + W+IIA  Y KQ +++    
Sbjct: 29  SAIDIPASTFDSEVEISLEELPDDPTELCTLLDNEKAAKNFWVIIALAYAKQNQIDHAID 88

Query: 62  ILEEGSSPEIDEYYADVRYERIAILNALGVYYTYL----------GKIETKQREKEEHFI 111
           IL  G    +      V  E++ +L  +   Y             G++ ++ + K+ +  
Sbjct: 89  ILNRG----LSSLAQGVTKEKLGLLGWICWLYMLKSREAPRVAPEGQLVSEAKTKDYYLQ 144

Query: 112 LATQYYNKASRIDMHEPSTWVGKGQLLLAKGE------------------VEQASSAFKI 153
            AT   N+ASR++   P  ++ +G L + +                    VE    A K 
Sbjct: 145 AATSTLNEASRLNPAFPPLFLARGVLSILRASLQPPAKTLRPGTVDTSERVESLRQALKC 204

Query: 154 VLEADRD----NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGA-IRLGIGLCRY 208
             E+ +     N+ A+LG+A  ++  GRY+++LE Y+  L   P+      R+GIG C +
Sbjct: 205 FDESAKSFGNRNIMAILGRARAQYMLGRYAEALEGYQEVLIKMPNMRDPDPRIGIGCCLW 264

Query: 209 KLGQLGKARQAFQRALQLDPENVEALVALAVMDL------QANEAAG---IRKGMEK-MQ 258
           +L    +A+ A+ RAL L+PE+  A + L    L        N+ A     +  M +  Q
Sbjct: 265 QLDFKEQAKTAWSRALALNPESKVANILLGAYYLYDSSRHATNDPAFGSLYKIAMTQYTQ 324

Query: 259 RAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSK 318
           +AF++     M       +F        VE L   A+ +T+     S  +Y LAR  H +
Sbjct: 325 KAFKLDKEDPMTCAMFGGYFLLRKHFPTVEALARKAIELTDVNAIASDGWYLLARKEHFE 384

Query: 319 GDYEKAGLYYMASVKEINKPHEFIFP-YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCE 377
           G+  +A  YY  S +      +   P  +G  Q+Q+K GD+  A    EK+++    N E
Sbjct: 385 GNAARANEYYNRSDQARGGSDKGYLPAKFGAVQMQVKTGDYDGAKFRLEKIIQ-QTKNPE 443

Query: 378 TLKALGHIYVQ--------------LGQIEKAQELLRKA--------AKIDPRDAQAFID 415
           ++  LG ++ +                +++KA  LL            K+ P D    + 
Sbjct: 444 SMTLLGALFAEEVFAAQSSQLKEDKSAEVKKATSLLESVRASWKDEKKKLSP-DESVLLY 502

Query: 416 LGELLISSDTGAAL-----------------------DAFKTARTLLKKAGEEVPIEVLN 452
           L  L  S     ++                       D  +T + +L+   E +  ++LN
Sbjct: 503 LARLYESGSPDKSMQCLQQVEQMQLAQIPDTERPEDIDDEETVKNMLR---ENLAPQLLN 559

Query: 453 NIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFE 512
           N+G   +   + E A   F+ AL   +     D  T T  +                   
Sbjct: 560 NMGCFLYHSEKIELARNMFQTALNACVKSRDRDDSTDTDAL------------------- 600

Query: 513 NDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKAR 572
                        T+ +NLAR  E       A  +Y  +L ++ DY +A  RL  IA   
Sbjct: 601 -----------VTTISYNLARTYEAAAMPEEAKKVYEGLLERHSDYTEANARLTYIA--- 646

Query: 573 NNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDD------WVKAKETFRAASDATDGK 626
               L     +E        P  ++ L +LE  N +      W  +K   + A+ A D +
Sbjct: 647 ----LRQSPTDEG-------PKKMAKLYELESTNLEVRALFGWYLSKSKRKVANIAEDHE 695

Query: 627 --------------DSYATLSLGNWNYFAALRNEKRAPKLEATH----LEKAKELYTRVI 668
                         D Y+   +GN  Y  A R+ +R  + +        EKA E + + +
Sbjct: 696 QRHYKHTLQGYDKHDRYSLTGMGNI-YLLAARDMRRDTEQDKEKRRKVYEKAVEFFDKAL 754

Query: 669 VQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPD------VWINLAH 722
                N YAA G  V L      D  KD  T VQ      +F ++ D      V++NL H
Sbjct: 755 QLDPKNAYAAQGIAVAL-----VDDRKDYTTAVQ------IFSRIRDTLRDASVYLNLGH 803

Query: 723 VYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQ----------DCKKS 772
           VY     F+ +++ Y+  L K     D QIL  L R        +          DC + 
Sbjct: 804 VYAELRQFSRSIENYEAALSKD-RQRDTQILACLGRVWLLKGMQENNLAAMNTALDCTQ- 861

Query: 773 LLRAIHLAPSNYTLRFDAGVAMQKFS--ASTLQKTRRTADEVRSTVAELENAVRVFSHLS 830
             RA  +AP    L F+      + +    +L +++RT  +V++    L+ A+  F  ++
Sbjct: 862 --RARAIAPEQIHLEFNVAFVQNQIALLVISLPESQRTLQDVQAASDGLDEAINTFIQIA 919

Query: 831 AA 832
            A
Sbjct: 920 KA 921


>gi|453084022|gb|EMF12067.1| hypothetical protein SEPMUDRAFT_149849 [Mycosphaerella populorum
           SO2202]
          Length = 1218

 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 232/1008 (23%), Positives = 406/1008 (40%), Gaps = 192/1008 (19%)

Query: 4   VYIPVQ--NSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQ 61
           + IPV+  + +E V V L +   D  ++ D+L+ E    + W+ IA  Y KQ +      
Sbjct: 36  IDIPVRGDDGDEAVNVDLSEALDDVGELCDLLETECVAKNYWITIALAYVKQKRANMAVD 95

Query: 62  ILEEGSSPEIDEYYADVRYERIAILNALGVYY------------TYLGKIETKQREKEEH 109
           IL+ G    ++   A    +++++L  +   Y            T   + +T +R KE  
Sbjct: 96  ILKRG----LEALRAGRDEDKLSLLTCMCWVYLWQCRRAPRVKPTQPKEGQTDERLKENW 151

Query: 110 FILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVE------------------QASSAF 151
             LAT   N ASRI    P  ++ +G LLL K  ++                  QAS  F
Sbjct: 152 LALATSTLNDASRISPSYPPLFLARGTLLLLKASLQPQKFGPGGEHSDRADTLKQASKCF 211

Query: 152 KIVLEADRD-NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSC--PGAIRLGIGLCRY 208
                   + NV A++G+A   F+ G++  +   Y++AL+  P    P   R+GIG C +
Sbjct: 212 DDAYRTSGNKNVLAVMGKAKANFSMGKFDQAYVLYQQALERAPDMVDPDP-RIGIGACLW 270

Query: 209 KLGQLGKARQAFQRALQLDPENVEALVALAVMDL------QANEAAGIR---KGMEK-MQ 258
           +LG    AR+A++R+L+L+  +  A + L +  L       +N+ A      K M    Q
Sbjct: 271 QLGHKENAREAWERSLELNESSTIANILLGLYHLDQSSHYNSNDPAFAPIYGKAMTTYTQ 330

Query: 259 RAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSK 318
            AF++    A+       +F        V++L   A+  T+   + S  +Y LAR  H +
Sbjct: 331 TAFKLDAMHALTCATFGGYFLLRRAWVNVDRLARRAIEHTDVNASASDGWYLLARKEHYE 390

Query: 319 GDYEKAGLYY-MASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCE 377
           GD +KA  YY  A +        ++   +G  Q++  + D+  A    EK++     + E
Sbjct: 391 GDLQKAQDYYNKADLARGGDERGYLPAKFGAAQLKTLMNDYDGAKFRLEKMVSTN-KSVE 449

Query: 378 TLKALGHIYVQ-------LGQIEKAQELLRKA---------------AKIDPRDAQAFID 415
            +  LG ++ +        G  E+  +  +KA                KI P D+   ++
Sbjct: 450 AMTLLGILHAEDVFAKQVTGLKEETADSRKKAIALLESVRVAWRDSKKKISP-DSAVLLN 508

Query: 416 LGELLISSDTGAAL--------------------DAFKTARTLLKKAGEEVPIEVLNNIG 455
           L  L        AL                    +  +    +L    E +  ++LNNIG
Sbjct: 509 LARLYEQEQPEKALACLQHVEQLELDELDDEDLPEGMEDETAILAAKREMLSPQLLNNIG 568

Query: 456 VIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDG 515
             HF+      A ++F+ AL   + ++  D+   T   DA  S                 
Sbjct: 569 CFHFQAERLSQARENFQAALRSSVSISNKDASVDT---DALVS----------------- 608

Query: 516 NHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNL 575
                     T+ +NL R+ E       A  +Y+ +L ++ DYVDA +R+A +A   + +
Sbjct: 609 ----------TISYNLGRVYEAEGIEDEAEKIYKSLLDRHPDYVDANIRMAYLALRSDPV 658

Query: 576 QLS---IELVN------EALKVNGKYPN-----ALSMLGDLELKNDDWVKAKETFRAASD 621
           +      +LV+      EA  ++G Y N      L++  D E K+         ++    
Sbjct: 659 KGGEAIKQLVDADPGNLEARALHGWYLNRTKKRTLALNEDQEQKH---------YKHTLM 709

Query: 622 ATDGKDSYATLSLGNWNYFAA---LRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAA 678
             D  D Y+   +GN N   A    R+  +     +    +A E + +V+     N +AA
Sbjct: 710 TYDKHDIYSLTGMGNLNLVIAREMPRDTDQHKDRRSKTYSRAMEFFDKVLTLDPKNAFAA 769

Query: 679 NGAGV-VLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMY 737
            G G+ ++ E+     +  +F++V+E+      V+   V INL HV+     F+ +++ Y
Sbjct: 770 QGVGIGMVEERKDTAAAIHIFSKVRES------VKDASVHINLGHVFCELKQFSRSIENY 823

Query: 738 QNCLRKFYYNTDAQIL-------LYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDA 790
           +  L K     D QI+       L   RT    E ++       +A+  +P N   +F+ 
Sbjct: 824 ELALVK-SREKDPQIMACLGRAWLMRGRTEKNLEHYKMSLDYSQQALAHSPENINFKFNV 882

Query: 791 GVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGFDEKKINTHVE 850
                + +   +     T  E   T+ ++E A +              G DE  I + +E
Sbjct: 883 AFVQIQIAQQMI-----TQPEANKTLVDVEAANK--------------GLDE-AIESFIE 922

Query: 851 YCKHLLDAAKIHREAAEREEQQNRQRQEAARQAALAEEARRKAEEQKK 898
             K        H    + E++ N  R    RQ A A E  R+AE ++K
Sbjct: 923 IAKGPSPPFPRH----DIEQRANMGRNTMKRQLATATE--RQAEYERK 964


>gi|317138720|ref|XP_001817096.2| hypothetical protein AOR_1_1140184 [Aspergillus oryzae RIB40]
          Length = 1950

 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 240/1006 (23%), Positives = 420/1006 (41%), Gaps = 127/1006 (12%)

Query: 2    ACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQ 61
            + + IP    + EV V+L+ LP D +++  +L+ E+A  + W+IIA  Y KQ +++    
Sbjct: 33   SAIDIPASTLDSEVEVSLEGLPDDPTELCTLLENEKAAKNFWVIIALAYAKQKQIDHAID 92

Query: 62   ILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQ--------------REKE 107
            IL +G    +         E++ +L     +  +L  ++++Q              + K+
Sbjct: 93   ILNKG----LTSVAHGATKEKLGLLG----WVCWLLMLKSRQAPRVAPEGELYAEAKTKD 144

Query: 108  EHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-----------------VEQASSA 150
             +  LAT   N+ASR++   P  ++ +G L L +                   VE    A
Sbjct: 145  HYLQLATSTLNEASRLNPAFPPLFLARGVLSLLRASLHPPRPVRPGTVDTSERVESLRQA 204

Query: 151  FKIVLEADR----DNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGA-IRLGIGL 205
             K   E+ +     NV A+LG+A  ++  GRY+++LE Y++ L   P       R+GIG 
Sbjct: 205  LKCFEESSKAFGGRNVMAILGRARTQYMLGRYAEALEGYQKVLMKMPGLTDPDPRIGIGC 264

Query: 206  CRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDL-------QANEAAG--IRKGMEK 256
            C + LG   +A+ A++RAL L+P++  A + LAV  L         + A G   +  M +
Sbjct: 265  CLWHLGFKDQAKAAWERALALNPDSKVANILLAVYYLYDSSRHATTDPAFGSLYKVAMTQ 324

Query: 257  -MQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSY 315
              Q+AF++     M       +F     +  VE L   A+  T+     S  ++ L R  
Sbjct: 325  YTQKAFKLDKEYPMTGALFGGYFLLRKSYSTVETLARRAIEHTDVMQIASDGWFLLGRKA 384

Query: 316  HSKGDYEKAGLYYMASVKEINKPHEFIFP-YYGLGQVQLKLGDFRSALTNFEKVLEIYPD 374
            H +GD  +A  +Y  S +      +   P  +G  Q+Q+   D+  A    EK+++    
Sbjct: 385  HYEGDLTRAAEFYNRSDQARGGGDKGYLPARFGTVQMQVSNKDYDGAKFRLEKIIQ-QTK 443

Query: 375  NCETLKALGHIYVQ-------LGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGA 427
            N E +  LG +Y +       +G  E      +KA  +       + D G+ L   ++  
Sbjct: 444  NPECMILLGALYAEEVFTSERIGSKEDKSAEAKKAISLLESVRALWKDEGKKLSPEESVL 503

Query: 428  ALDAFKTARTLLKKAGEEVP-IEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDS 486
               A    RT  +K+ + +  +E L    ++  E  E     +  K AL   +   LL +
Sbjct: 504  VYLARLYERTAPEKSMQCLSQLEELQLAAIVEDEHREGLENEEQLKAALRVNLPPQLLSN 563

Query: 487  KT----KTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTV 542
                  +   +D + +M +          E +  H +      T+ +NL R  E      
Sbjct: 564  MGCFLYQAEKVDQARTMFEMALNACVRSQEKESEH-DTDALVTTISYNLGRTYEASDMPE 622

Query: 543  AASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDL 602
             A  +Y  +L ++ DY +A  RL  IA       L     +E  K   K   A S   +L
Sbjct: 623  EAKKVYEGLLERHGDYTEASARLTYIA-------LRQSPTDEGPKRMAKLYEADST--NL 673

Query: 603  ELKND-DWVKAKETFRAASDATDGK--------------DSYATLSLGNWNYFAA--LRN 645
            E++    W  +K   R A+ A D +              D Y+   +GN +   A  +R 
Sbjct: 674  EVRALFGWYLSKSKKRVANLAEDQEQRHYKHTLQYFDKHDRYSLTGMGNVHLMTARDMRR 733

Query: 646  EKRAPKLEATHL-EKAKELYTRVIVQHTSNLYAANGAGVVLAE-KGQFDVSKDLFTQVQE 703
            E    K +   + E+A E + + +     N YAA G  + L + K  +  +  +F+++++
Sbjct: 734  ENDQEKEKRRKMYERAVEFFDKALQLDPQNAYAAQGIAIALVDAKKDYSTAVHIFSKIRD 793

Query: 704  AASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLART---H 760
                S       V++NL HVY     +  +++ Y+  L K     DAQIL  L R     
Sbjct: 794  TLRDS------SVYLNLGHVYAELRQYTRSIEHYEAALSKDRAR-DAQILACLGRVWLLK 846

Query: 761  YEAEQWQDCKKSLL----RAIHLAPSNYTLRFDAGVAMQKFSA--STLQKTRRTADEVRS 814
             + E      K+ L    RA  +APS   L F+      + ++   +L +T++T  +V+ 
Sbjct: 847  GKQEMSLSAMKTALDYARRAHSVAPSQVHLEFNVAFVQNQIASLVYSLPETQKTVQDVQD 906

Query: 815  TVAELENAVRVFSHLSAASN-LHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQN 873
                L  AV  F  ++   N  +  G  E++ N      K L  A +  RE  E+   + 
Sbjct: 907  ASDGLREAVESFGRIAQTKNPPYPAGALEQRANMGKTIIKQLERALQSQREYEEKNAAKL 966

Query: 874  RQRQEAAR-------------QAALAEEARRKAEEQKKYLLEKRKL 906
            +Q +EA               Q A  E  +R AEE+++ + E ++L
Sbjct: 967  QQAREAREAEIRRREEEVRKAQEAERERKQRVAEERQRMVEEAQRL 1012


>gi|262302891|gb|ACY44038.1| SH2 domain binding protein [Abacion magnum]
          Length = 173

 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 75/170 (44%), Positives = 109/170 (64%)

Query: 147 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 206
           A + F  VL    +N+P+LLG+AC+ FN+  +  +L FYK+AL+ +P+CP A+RLG+G C
Sbjct: 1   ADAQFNFVLNQSPNNIPSLLGKACIAFNKKDHRGALAFYKKALRTNPNCPAAVRLGMGHC 60

Query: 207 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY 266
             KLG+L KAR AF+RALQLD + V ALV +AV++L       IR G++ + RA+ I   
Sbjct: 61  FLKLGKLDKARLAFERALQLDSQCVGALVGIAVLELNNKTTDSIRNGVQMLSRAYTIDST 120

Query: 267 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYH 316
             M LN+LANHFFF   +  V+ L   A   T +   ++ S Y +AR++H
Sbjct: 121 NPMVLNHLANHFFFKKDYQKVQHLAIHAFQNTENEAMRAESCYQMARAFH 170


>gi|407923080|gb|EKG16168.1| Tetratricopeptide TPR-1 [Macrophomina phaseolina MS6]
          Length = 1217

 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 249/1055 (23%), Positives = 425/1055 (40%), Gaps = 215/1055 (20%)

Query: 13   EEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQILEEGSSPEID 72
            E+V + L +L  D +++  +L+ E      W+ IA  Y KQ K      IL +      D
Sbjct: 44   EQVEIDLVELADDPTELCILLENESVVKSTWMTIALAYAKQRKTTLAIDILHKAR----D 99

Query: 73   EYYADVRYERIAILNALGVYYTYLGKIETKQRE---------KEEHFILATQYYNKASRI 123
             + +    E+++IL+AL      + +   + R          KE+    AT   N ASRI
Sbjct: 100  AFTSAGAEEKLSILSALFWLNLCMCREAPRLRPEGASPELKTKEQWIQAATANLNDASRI 159

Query: 124  DMHEPSTWVGKGQLLLAKGE------------------VEQASSAFKIVLEA-DRDNVPA 164
                   ++ +G L L +                    + QA+  F   L A    N+ A
Sbjct: 160  SPSYAPLFLARGVLYLLRASAITPTKSGAPDSAERTDALRQAAKCFDDSLRAYQGKNLMA 219

Query: 165  LLGQACVEFNRGRYSDSLEFYKRALQVHPSC--PGAIRLGIGLCRYKLGQLGKARQAFQR 222
            +LG+A V+++ G+Y+DSL+ Y++ L+  P    P   R+GIG C ++LG    A+ A+QR
Sbjct: 220  ILGKARVQYSLGKYADSLQCYQKVLEKAPDMVDPDP-RIGIGCCLWQLGHKDDAKNAWQR 278

Query: 223  ALQLDPENVEALVALAVMDLQAN--------EAAGI-RKGMEK-MQRAFEIYPYCAMALN 272
            AL L P++  A + L +  L  +        E A I +K M +  Q+AF++     +   
Sbjct: 279  ALDLCPDSKTANILLGLYHLNVSSQFPTTSPEFAPIYKKAMTQYTQKAFKLDDKYPLTCA 338

Query: 273  YLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYM-AS 331
                +F        VE+L+  A+  T+        +Y L R  H + +  KA  YY  A 
Sbjct: 339  TFGGYFLMRKAMAQVERLSRRAIDFTDVNAVAGDGWYLLGRKEHYENEISKALEYYQRAD 398

Query: 332  VKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQ--- 388
                 +   ++   +G+ Q+++ + DF  A    EK+++    + E +  LG +Y +   
Sbjct: 399  TARGGEDRGYLPAKFGMAQIRIMMQDFEGAKLRLEKIIQ-QSKSIEAMTLLGTLYAEDVF 457

Query: 389  -----------LGQIEKAQELLR--KAAKIDPR-----DAQAFIDLGELL---------- 420
                         +++KA  LL   ++A  DP+     D+   ++L  L           
Sbjct: 458  TAQASNMKEDKSNELKKAISLLEGVRSAWKDPKRKASPDSAVLLNLARLYEVDHPEKSLQ 517

Query: 421  ---------------------------ISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLN 452
                                          +  AA + ++ A R  L    E +P ++LN
Sbjct: 518  CLHQVEQMELDEIPEEDRPDEPQAPDPKQENYDAAKEVYEEAKRAHLNALRENLPPQLLN 577

Query: 453  NIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFE 512
            N+G  ++++ ++  A + F+ AL   + +   D    T  +                   
Sbjct: 578  NMGCFYYQQEKYAQARELFQSALNACVKVGDKDQSVDTDAL------------------- 618

Query: 513  NDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKAR 572
                         T+ ++LAR  E       A  +Y  +L ++ DYVDA +RL  I K R
Sbjct: 619  -----------VTTISYSLARTYEAEGMLDEAKKVYEGLLQRHSDYVDANVRLTYI-KLR 666

Query: 573  NNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDD------WVKAKETFRAAS------ 620
             + Q             G  P A+S L   E  N +      W   K   R ++      
Sbjct: 667  QSPQ-------------GDGPKAMSELYKAESSNLEVRALYGWYLNKSKMRTSNVNEDQE 713

Query: 621  --------DATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEK----AKELYTRVI 668
                       D  D Y+   +GN  Y    R  +R  + +     K    A E + + +
Sbjct: 714  QRHYKHTLQQYDKHDRYSLTGMGNI-YLTIAREMRRDTEQDKEKRRKMYQRAVEFFDKAL 772

Query: 669  VQHTSNLYAANGAGVVLAEKGQFDVSKD------LFTQVQEAASGSVFVQMPDVWINLAH 722
                 N YAA G  +      Q + +KD      LFT+V+E       V+   V+INL H
Sbjct: 773  QLDPKNAYAAQGIAIA-----QIECNKDFAGAVQLFTKVRET------VRDASVYINLGH 821

Query: 723  VYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLART----HYEAEQWQDCKKSL---LR 775
            VY     ++ A++ Y+  L K     DA IL  L R       +    Q  K SL    R
Sbjct: 822  VYCELKQYSRAIENYEIALSKDRAR-DANILACLGRVWLLKGKQERNIQAMKTSLDYSQR 880

Query: 776  AIHLAPSNYTLRFDAGVAMQKFSA--STLQKTRRTADEVRSTVAELENAVRVFSHLSAAS 833
            A+ +AP    L+F+      + +     L +  R+ +EV +    L++A+  FS ++ + 
Sbjct: 881  ALEVAPEQIHLKFNVAFVQIQIAQLIHVLPENSRSLEEVEAAAKGLDDAIEAFSTIAKSP 940

Query: 834  NLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEAARQAALAEEAR--R 891
            N     F  + I       ++        ++  ER  Q  R+ +E  + AA  +EAR  R
Sbjct: 941  N---PPFPRQDIEMRANMGRN------TQKKQLERAVQSQREYEE--KNAAKLKEAREKR 989

Query: 892  KAEEQKKYLLEKRKLEDEQKRLRQQEEHFQRVKAR 926
            +AE +K+   +++K E E +RLR+  E  Q+++ R
Sbjct: 990  EAEIRKREEEKRQKEEAEAERLRKIAEERQKMQER 1024


>gi|326468698|gb|EGD92707.1| tetratricopeptide repeat protein [Trichophyton tonsurans CBS
           112818]
          Length = 1203

 Score =  153 bits (387), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 219/954 (22%), Positives = 386/954 (40%), Gaps = 182/954 (19%)

Query: 2   ACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQ 61
           + V IP    + EV ++L +LP D +++  +L  E+A  + W+IIA  Y KQ +++   +
Sbjct: 32  SAVDIPASTFDSEVEISLQELPDDPTELCTLLDNEKAAKNFWVIIALAYAKQKQIDHAIE 91

Query: 62  ILEEGSSPEIDEYYADVRYERIAILNALGVYYTYL------------GKIETKQREKEEH 109
           IL  G    +         ER+++L    + + YL            G++ ++ + KE +
Sbjct: 92  ILTRG----LASLAHGATKERLSLLG--WICWLYLIKSRQAPRVASEGQLHSEAKTKEFY 145

Query: 110 FILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE------------------VEQASSAF 151
              AT   N+ASR++   P  ++ +G L + +                    VE    A 
Sbjct: 146 LQAATATLNEASRLNPAFPPLFLARGVLSILRASLQPPSKPLRPGTVDTSERVESLQQAI 205

Query: 152 KIVLEADR----DNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGA-IRLGIGLC 206
           K   E+ +     N+ A+LG+A   +  GRY+++LE  + AL   PS      R+GIG C
Sbjct: 206 KCFDESAKAFGGRNIMAILGRARANYMLGRYAEALEGCQEALVKMPSMRDPDPRIGIGCC 265

Query: 207 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANE---------AAGIRKGMEK- 256
            ++L    +A+ A+ RAL L+P++  A + LA   L  +          ++  +  M + 
Sbjct: 266 LWQLDFKDQAKVAWNRALSLNPDSKAANILLAAYYLHDSSRHSTSDPEFSSLYKTAMTQY 325

Query: 257 MQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYH 316
            Q+AF++     M      ++F        VE L   A+ +T+     S  +Y LAR  H
Sbjct: 326 TQKAFKLDKEYPMTCATFGSYFLLRKHFPTVEALARKAIELTDVNAIASDGWYLLARKEH 385

Query: 317 SKGDYEKAGLYYMASVKEINKPHEFIFPY-YGLGQVQLKLGDFRSALTNFEKVLEIYPDN 375
           ++GD E+A  YY  S +      +   P  +G  Q+ ++  DF  A    EK+++    N
Sbjct: 386 TEGDPERALEYYNRSDQARGGADKGYPPAKFGAVQMLVRRKDFDGAKFRLEKIIQ-QTKN 444

Query: 376 CETLKALGHIYV------------QLGQIEKAQELL---RKAAKIDPR----DAQAFIDL 416
            E +  LG +Y             +  + +KA  LL   R + K D +    D    + L
Sbjct: 445 PEAMALLGSLYADEVFAAANSKEDKSAEAKKAISLLESVRTSWKADKKKLTPDESVLLYL 504

Query: 417 GELLISSDTGAAL--------------------DAFKTARTLLKKAGEEVPIEVLNNIGV 456
             L  +S    ++                    D  +  + +     E +  ++LNNIG 
Sbjct: 505 ARLYETSAPDKSMQCLNQVEEMQLAQIPDDEKPDNVEGEQAMTDILRERLSPQLLNNIGC 564

Query: 457 IHFEKGEFESAHQSFKDALGDGIWLTLLD--SKTKTYVIDASASMLQFKDMQLFHRFEND 514
             ++  + E A    + AL   +     +  S T  YV                      
Sbjct: 565 FLYQADKIEQARMMLQTALNACVQAQEREDASDTDAYV---------------------- 602

Query: 515 GNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNN 574
                      T+ +NLAR  E       A   Y  +L ++ DYV+A  RL  I+  +++
Sbjct: 603 ----------TTISYNLARTYEAAGMLDEAKKAYEGLLERHSDYVEANARLTYISLRQDS 652

Query: 575 LQLSIELVNEALKVNGKYPNALSMLGDLELKNDD------WVKAKETFRAASDATDGK-- 626
                         +G+    ++ L + E  N +      W   K   R A+ A D +  
Sbjct: 653 --------------SGEGAKKMTKLYETEASNMEVRALYGWYLNKTKRRVANLAEDHEQR 698

Query: 627 ------------DSYATLSLGNWNYFAALRNEKRAPKLEATH----LEKAKELYTRVIVQ 670
                       D YA   +GN  Y    R+ +R  + E        EKA E + + +  
Sbjct: 699 HYKHTLQGYDKHDRYALTGMGNL-YLLTGRDMRRDGEQEKEKRHKIYEKAVEFFDKALQL 757

Query: 671 HTSNLYAANGAGVVLA-EKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGN 729
              N YAA G  + L  ++  +  +  +F++V++    S       V++NL HV+     
Sbjct: 758 DPKNAYAAQGIAIALVDDRKDYSTAVQIFSKVRDTLRDST------VYLNLGHVFAELRQ 811

Query: 730 FALAMKMYQNCLRKFYYNTDAQILLYLARTHY---EAEQWQDCKKSLL----RAIHLAPS 782
           F  +++ Y+  L K     DAQIL  L R  +   + EQ     K+ L    RA   AP 
Sbjct: 812 FTKSIENYEISLSKDRAR-DAQILACLGRVWFLKGKQEQNLTAMKTALEYAERARSAAPD 870

Query: 783 NYTLRFDAGVAMQKFS--ASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASN 834
              L F+      + +  A +L + ++++++V   +  L  A+  F  ++++ N
Sbjct: 871 QIHLEFNIAFVQNEIALLAISLPEAQKSSEDVEEAMNGLTAAIEAFDKIASSKN 924


>gi|302916809|ref|XP_003052215.1| RNA polymerase II-associated protein [Nectria haematococca mpVI
           77-13-4]
 gi|256733154|gb|EEU46502.1| RNA polymerase II-associated protein [Nectria haematococca mpVI
           77-13-4]
          Length = 1216

 Score =  153 bits (386), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 219/936 (23%), Positives = 383/936 (40%), Gaps = 148/936 (15%)

Query: 2   ACVYIPVQNSEEE--VRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQF 59
           + + IPVQ  +E+  V + L+ L  D +++  + + E+A    W+ +A  Y KQ K++  
Sbjct: 30  SAIDIPVQGDQEDEAVEIDLEDLVDDPTELCTLFENERAAKTYWMTVALAYAKQHKIDHA 89

Query: 60  RQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYL----------GKIETKQREKEEH 109
            ++L  G S  I     + R ++++++  L   Y +           G   ++ + KE +
Sbjct: 90  IEMLLRGGS-AIQSNSTNPR-DKVSMICCLCWMYLWKSREAPRVAPDGTRVSEAKTKEYY 147

Query: 110 FILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQAS---------------SAFKIV 154
             LAT   N A+R++   P  ++ +G LLL +  ++  S               +A K  
Sbjct: 148 LQLATSSLNDAARLNPSFPPIFLARGVLLLLRASLQAPSKTAGGIGSEKHELLKTAVKSF 207

Query: 155 LEADR----DNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS-CPGAIRLGIGLCRYK 209
            +A R     N+ AL+G+A   F+  +Y DSL  Y+  L   P       R+GIG C ++
Sbjct: 208 DDALRVSQGKNMLALMGKARALFSMHKYPDSLAIYQDVLHKMPDLVDPDPRIGIGCCFWQ 267

Query: 210 LGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGI---------RKGM-EKMQR 259
           LG    A+ A++R L+++P +  A + L +  L A+    +         +K M E  Q+
Sbjct: 268 LGFKDDAKMAWERCLEINPNSKVANILLGLYYLDASGHVPVNSDEFLKLYKKAMTEYTQK 327

Query: 260 AFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 319
           +F++     +  +  AN+F         ++L   A+  T+     S  +Y LAR  H  G
Sbjct: 328 SFKLDKDLPLTCSTFANYFLSRKAWDNADKLAHKAIQYTDVNAIASDGWYLLARKEHYSG 387

Query: 320 DYEKAGLYYMASVKEINKPHEFIFP-YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCET 378
           + E+A  YY  +            P  +G+ Q+ +   D   A    EK+++    N E 
Sbjct: 388 NTERATDYYRRADDARGGTETGYLPAKFGVAQLSVLKNDLGEAKLRLEKMIQ-QSKNHEA 446

Query: 379 LKALGHIYVQ--------------LGQIEKAQELLRKA--AKIDPR-----DAQAFIDLG 417
           +  LG +Y +                +++KA  LL  A  A  DP+     DA   ++L 
Sbjct: 447 MILLGTLYAEEVFANQVSDSKEDKSAELKKAITLLEGARNAWKDPKKTLAPDASVLLNLA 506

Query: 418 ELLISSDTGAALDAFKTARTL-------------------LKKA-GEEVPIEVLNNIGVI 457
            L  +     AL   +    L                   +K A  + +P ++LNNIG  
Sbjct: 507 RLYETDHPDKALQCLQQVEQLELDQVPPSERPEDVTDEAEIKAALRKSLPPQLLNNIGCF 566

Query: 458 HFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNH 517
           H +  + E A   F+ AL   I +   D    T   DA  S                   
Sbjct: 567 HSQAEKHELASDMFEAALSACIKIGEKDPDMDT---DALVS------------------- 604

Query: 518 VELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQL 577
                   T+ FNLAR  E    T  A  +Y  +L ++ DY DA  RLA I   +N  + 
Sbjct: 605 --------TISFNLARSYESRGLTDKAVEVYEGLLARHDDYTDARARLAYIKLRKNPNKE 656

Query: 578 SIELV-------NEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDAT---DGKD 627
             + V       N  L+V   Y   L  +   +  ++  +     FR         D  D
Sbjct: 657 GPDAVAKLYQENNTDLEVRALYGWYLGRVHSRKRPSN--IGEDPEFRHYKHTLQNYDKHD 714

Query: 628 SYATLSLGNWNYFAA--LRNEKRAPKLE-ATHLEKAKELYTRVIVQHTSNLYAANGAGVV 684
            +A + +GN     A  +R E  + K + +    KA E + + +     N YAA G  + 
Sbjct: 715 RHALVGMGNLYLIQAREMRRESESDKQKRSATYGKAVEFFEKALSLDPKNAYAAQGIAIA 774

Query: 685 LAE-KGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRK 743
           L E K  +  +  +F +V+E    S       +++NL H+Y     ++ A++ Y+  L +
Sbjct: 775 LVEDKKDYKSALGIFNKVRETLRDS------HLYVNLGHIYAELRQYSKAIEHYEIALSR 828

Query: 744 FYYNTDAQILLYLART-------HYEAEQWQDCKKSLLRAIHLAPSNYTLRFD-AGVAMQ 795
                D  IL  L RT         + + +    +   +A+ +AP     +F+ A V +Q
Sbjct: 829 DGKANDPVILACLGRTWLNRGRSERDVDAYNKALECAQKALEVAPEQVHYKFNVAFVQIQ 888

Query: 796 KFSA-STLQKTRRTADEVRSTVAELENAVRVFSHLS 830
             +    L + +R+A+++      LE A+     ++
Sbjct: 889 LVTMIQNLPENKRSAEQLEKAAEGLEAAITSLDEIA 924


>gi|262302949|gb|ACY44067.1| SH2 domain binding protein [Nicoletia meinerti]
          Length = 176

 Score =  153 bits (386), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 76/174 (43%), Positives = 109/174 (62%)

Query: 151 FKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 210
           F  VL    +N+ +LLG+AC+ FN+  Y  +L FYK+AL+ +P+CP A+RLG+G C  KL
Sbjct: 3   FNFVLNQSPNNIASLLGKACIAFNKKDYRGALAFYKKALRTNPNCPAAVRLGMGHCFMKL 62

Query: 211 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 270
           G   KAR AF+RALQLD   V ALV L+++ L   +   IR G++ +  A+ I     M 
Sbjct: 63  GNQEKARLAFERALQLDAHCVGALVGLSILKLNQQQPESIRTGVQMLSMAYTIDSTNPMV 122

Query: 271 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 324
           LN+LANHFFF   +  V+ L   A   T +   ++ S Y LAR++H +GDY++A
Sbjct: 123 LNHLANHFFFKKDYHKVQHLALHAFHNTENEAMRAESCYMLARAFHVQGDYDQA 176


>gi|330939475|ref|XP_003305852.1| hypothetical protein PTT_18803 [Pyrenophora teres f. teres 0-1]
 gi|311316946|gb|EFQ86039.1| hypothetical protein PTT_18803 [Pyrenophora teres f. teres 0-1]
          Length = 1181

 Score =  152 bits (385), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 223/923 (24%), Positives = 387/923 (41%), Gaps = 144/923 (15%)

Query: 14  EVRVALD-QLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQILEEGSSPEID 72
           +V + LD Q+  D +++ DIL+AE++    W+ +A  Y K  +++    +L++ +    +
Sbjct: 44  DVEIPLDDQIQDDPTELCDILEAEKSATSTWVQVAVAYAKHKRIDTAIDVLKQATG-VFN 102

Query: 73  EYYADVRYERIAILNALGVYYTYLGKIETKQREKEEH---------FIL--ATQYYNKAS 121
             +++VR   ++ILN  G+ + YL K     R + ++         F +  AT   N AS
Sbjct: 103 RAHSEVR---LSILN--GLCWLYLQKCREAPRVRPQNADGDTKLKEFWIQSATGVLNDAS 157

Query: 122 RIDMHEPSTWVGKGQLLLAKGEVE-------------------QASSAFKIVLEADRD-N 161
           RI    P  ++ +G L L K  ++                   QA+  F+  L A    N
Sbjct: 158 RISPSHPPLFLARGVLYLLKASLQGPATAAGSTVSPERMETLKQAAKCFEDALRASGGRN 217

Query: 162 VPALLGQACVEFNRGRYSDSLEFYKRALQVHPSC--PGAIRLGIGLCRYKLGQLGKARQA 219
           + A +G+A V ++ G+++D+L+ Y+  L+  P    P   R+GIG C ++LG   +A  A
Sbjct: 218 LMAKMGKARVNYSMGKWADALKGYQNILESSPDLLDPDP-RIGIGCCFWQLGHKDEAATA 276

Query: 220 FQRALQLDPENVEALVALAVMDLQANE---------AAGIRKGM-EKMQRAFEI---YPY 266
           +QR+L+L+P++  AL+ L + + Q            AA I+K   E +Q A ++   YP 
Sbjct: 277 WQRSLELNPKSKIALILLGIYNFQLTANLSTADPKFAALIKKATGEYIQPALKLDNQYPL 336

Query: 267 -CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAG 325
            CA    YL             E +   A+ +T+     S  +Y  A+  H + +   A 
Sbjct: 337 SCATVGTYL----VLRKDLGKTEDVARRAIELTDTNAIASDGWYLRAKIAHQQENTALAA 392

Query: 326 LYYMASVKEINKPHEFIFP-YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGH 384
            YY  S +          P  +GL Q+ + + ++  A    EK+L+  P N E    LG 
Sbjct: 393 EYYSKSDQARGGEERGYIPAKFGLAQMNVLMSNYDGAKFRLEKILQQSP-NVEAQTLLGT 451

Query: 385 IYVQ---LGQIEKAQE----LLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTART 437
           +Y +     Q  K+ E     L+KA K       A+ D  + +I  D    L+  +    
Sbjct: 452 LYAEDVFAAQNSKSTEDKSAELKKALKYLESVQNAWKDPKKKVI-PDQSVLLNLAR---- 506

Query: 438 LLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASA 497
           L +    E  ++ L  + ++  E        + + + L +G  L     +     +  + 
Sbjct: 507 LYETDHPEKSLKCLEEVELMEIEA----IPEEDYPEGLEEGPELKAALRQLLPPQLLNNM 562

Query: 498 SMLQF------KDMQLFH-------RFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAA 544
              QF      +  +LF          EN  N ++      ++ FNLAR  E   +   A
Sbjct: 563 GCFQFQAERYVRAQELFQVALNACVNAENRDNTIDTDALVTSISFNLARTYEAEGEPEEA 622

Query: 545 SVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLEL 604
             +Y  +L ++ DYVDA +RL  IA            + +  K N       ++ G    
Sbjct: 623 KKVYNSLLQRHPDYVDARIRLTYIALREKPQDEGPRAMKDLFKENEDNVEVRALYG---- 678

Query: 605 KNDDWVKAKETFRA---ASD-----------ATDGKDSYATLSLGNWNYFAALRNEKRAP 650
               W   K   R    A+D            +D  D Y+ + +GN  + A  R   R+ 
Sbjct: 679 ----WYVNKSKKRTQNFAADEEQRLYKHTLQKSDKHDRYSLMGMGNI-HLAIAREMPRSS 733

Query: 651 KLEATH----LEKAKELYTRVIVQHTSNLYAANGAGVVLAE-KGQFDVSKDLFTQVQEAA 705
           + +        E+A E + +V+     N YAA G  + L E K  +  +  +FT+V+E  
Sbjct: 734 EQDKEKRRKGYERAVEFFDKVLQLDPKNAYAAQGIAIALVEDKKDYSTALQIFTKVKET- 792

Query: 706 SGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQ 765
                ++   V++NL H Y     +A A++ Y+  L +  +N + +IL  L R  Y   +
Sbjct: 793 -----LKDHSVFVNLGHTYCEIKQYARAIENYEAALSRSQHN-NPKILACLGRAWYLRAR 846

Query: 766 WQ----------DCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSAST----LQKTRRTADE 811
            +          D  K  L+A   APS+   +F+  VA  +F  +T    L + +RT  E
Sbjct: 847 HERSVAGIRTALDYSKQALKA---APSDLNSQFN--VAFVQFQIATMVYSLLEQQRTLQE 901

Query: 812 VRSTVAELENAVRVFSHLSAASN 834
           V      L  A+     L+   N
Sbjct: 902 VDEAATGLTEAIEALEKLAKEEN 924


>gi|157939607|gb|ABW05528.1| SH2 domain binding protein [Cypridopsis vidua]
          Length = 177

 Score =  152 bits (385), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 75/177 (42%), Positives = 106/177 (59%)

Query: 147 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 206
           A + F  VL ++   +PALLG+AC+ +N+  Y  +L FY++AL+   +CP  +RLG   C
Sbjct: 1   ADAQFNFVLNSNPGLIPALLGKACISYNKKDYKGALAFYRKALRTKTNCPAEVRLGFAYC 60

Query: 207 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY 266
             KL    KAR AFQRAL +DP  V ALV LA+MD  +     IR G+E++ +A+ I   
Sbjct: 61  FLKLNNHEKARMAFQRALDIDPNCVGALVGLAIMDFNSQTTERIRAGVERLSKAYSIDNT 120

Query: 267 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEK 323
             M LN+LANHFFF  Q+   + L   A   T +   K  S+Y LAR +H +GDY++
Sbjct: 121 NPMLLNHLANHFFFKKQYDKAQMLAFHAFHYTENETMKGESFYQLARCFHVQGDYDQ 177


>gi|262302929|gb|ACY44057.1| SH2 domain binding protein [Metajapyx subterraneus]
          Length = 178

 Score =  152 bits (384), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 78/178 (43%), Positives = 108/178 (60%)

Query: 147 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 206
           A + F  VL    +N+P+LLG+AC+ FN+  Y  +L FYK+AL+ +PSCP A+RLG+G C
Sbjct: 1   ADAQFNFVLNQSINNIPSLLGKACIAFNKKDYRGALAFYKKALRTNPSCPAAVRLGMGHC 60

Query: 207 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY 266
             KLG   KA  AF+RAL LD   V ALV LA++ L   E   IR G+  +  A+ I   
Sbjct: 61  FMKLGNEKKAWLAFERALDLDRGCVGALVGLAILKLNQQEEESIRSGVHMLSHAYSIDST 120

Query: 267 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 324
             M LN+LANHFFF   +  V+ L   A   T +   ++ S Y LAR++H + DY++A
Sbjct: 121 NPMVLNHLANHFFFKRDYHKVQHLALHAFHNTENEAMRAESCYQLARAFHVQADYDQA 178


>gi|429857169|gb|ELA32048.1| RNA polymerase ii transcription elongation factor [Colletotrichum
           gloeosporioides Nara gc5]
          Length = 1211

 Score =  152 bits (384), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 218/954 (22%), Positives = 385/954 (40%), Gaps = 183/954 (19%)

Query: 2   ACVYIPVQNSEEEVRVALD--QLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQF 59
           A + +PVQ   E+  V +D  +L  D +++  + + E+A    W+ ++  Y KQ K++  
Sbjct: 29  AAIDVPVQGEAEDEAVEIDLLELFDDPTELCTLFENERAARTYWMTVSLAYAKQKKIDHA 88

Query: 60  RQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYL----------GKIETKQREKEEH 109
            ++L  G +   D    +   E++++++ L   Y +           G++ ++ + KE +
Sbjct: 89  IEMLVRGGNAMRD----NGPKEKLSMISCLCWMYLWKSREAPRLPPDGELASEAKTKEYY 144

Query: 110 FILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADR---------- 159
             LAT   N ASRI+   P  ++ +G L L K  ++   +A    ++++R          
Sbjct: 145 LQLATSTLNDASRINPAFPPLFLARGVLQLLKASLQTPKTAGHGQVDSERADLLRSALKA 204

Query: 160 ----------DNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS-CPGAIRLGIGLCRY 208
                      N+ A++G+A   F+ G+Y +SL  Y+  LQ  P       R+GIG C +
Sbjct: 205 FEDAIRVSGGKNMLAMMGKARTFFSLGKYPESLACYQDVLQKMPDFVDPDPRIGIGCCFW 264

Query: 209 KLGQLGKARQAFQRALQLDPENVEALVALAVMDLQA------NEAAGIR---KGM-EKMQ 258
           +LG    A+ A++R+L+++P++    + L +  L A      N    +R   K M E  Q
Sbjct: 265 QLGFKDDAKLAWERSLEINPDHKVGNILLGLYYLDASGHIPTNSPDFLRLYKKAMTEYTQ 324

Query: 259 RAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSK 318
           ++F++     +     A +F    Q   V+ L   A+  T+     S  +Y LAR  H  
Sbjct: 325 KSFKLDKNMPLTCATFAGYFLSRKQLPTVDSLAHKAIQYTDVNAIASDGWYLLARKEHYT 384

Query: 319 GDYEKAGLYYMASVKEINKPHEFIFP-YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCE 377
           GD ++A  +Y  +            P  +G  Q+ +  GD   A    EK+++    + E
Sbjct: 385 GDPDRASDFYRRADDARGGSERGYLPAKFGAAQLAVLRGDLGEAKLRLEKIIQ-QSKSHE 443

Query: 378 TLKALGHIYVQ---------------------LGQIEKAQELLRKAAKIDPRDAQAFIDL 416
            +  LG +Y +                     +G +E  +   + + K    DA   ++L
Sbjct: 444 AMILLGTLYAEEVFANQDADGKEDKSAEMKKAIGLLEGVRGAWKDSKKSMSPDAAVLLNL 503

Query: 417 GELLISSDTGAALDAFKTARTL-LKKAGEE-------------------VPIEVLNNIGV 456
             L  +     A         L L++  EE                   +P ++LNNIG 
Sbjct: 504 ARLYETEYPDKAQQCLLQVEQLELEQVPEEEQPKDIEDEAEKRAALRKFLPPQLLNNIGC 563

Query: 457 IHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGN 516
            + +    E A + F+ ALG  + +   DS+     ID  A +                 
Sbjct: 564 FYSQSERHEQASEMFEAALGACMKIGEKDSE-----IDTDALV----------------- 601

Query: 517 HVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQ 576
                    T+ FNL R  E       A  +Y  +L ++ DY DA  RLA I K R N  
Sbjct: 602 --------TTISFNLGRSYESRGLLDEAIEVYDGLLKRHDDYTDARTRLAYI-KLRKN-- 650

Query: 577 LSIELVNEALKVNGKYPNALSML-----GDLELKN-DDWVKAK----------------E 614
                       N + P+A++ L      DLE++    W   K                 
Sbjct: 651 -----------PNKEGPDAVAKLYQENPQDLEVRALYGWYMGKVHSRKRPHNINEDHEFR 699

Query: 615 TFRAASDATDGKDSYATLSLGNWNYFAALRNEKRAP-----KLEATHLEKAKELYTRVIV 669
            ++      D  D YA + +GN  Y    R  +R       K  AT+  KA E + + + 
Sbjct: 700 HYKHTLQNYDKHDRYALVGMGNL-YLIQAREMRRESDSDRAKRSATY-SKAVEFFEKALS 757

Query: 670 QHTSNLYAANGAGVVLAE-KGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQG 728
               N YAA G  + L E K  +  +  +F ++++       ++   V++NL H+Y    
Sbjct: 758 LDPRNAYAAQGIAIALVEDKKDYKTALGIFVKIRDT------IKDAHVYVNLGHIYAELR 811

Query: 729 NFALAMKMYQNCLRKFYYNTDAQILLYLART---HYEAEQWQDCKKSLL----RAIHLAP 781
            +  A++ Y+  L K   + D  IL  L RT      +E+  D  +  L    +A+  AP
Sbjct: 812 QWTKAIENYETALSKEGKSNDPVILACLGRTWLNKGRSERDLDAYRQSLEYAKKALEAAP 871

Query: 782 SNYTLRFDAGVAMQKFSAST----LQKTRRTADEVRSTVAELENAVRVFSHLSA 831
                +F+  VA  +   +T    L + +RT  +++   A LE A+     ++ 
Sbjct: 872 DQVHYKFN--VAFVRIQMATMVYALSENQRTVAQLQDAAAGLEAAISALDEIAG 923


>gi|262302947|gb|ACY44066.1| SH2 domain binding protein [Machiloides banksi]
          Length = 178

 Score =  152 bits (384), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 74/178 (41%), Positives = 111/178 (62%)

Query: 147 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 206
           A + F  VL    +N+P+LLG+AC+ +N+  Y  +L +YK+AL+ +P+CP A+RLG+  C
Sbjct: 1   ADAQFNFVLNQSPNNIPSLLGKACIAYNKKDYRGALAYYKKALRTNPNCPAAVRLGMAHC 60

Query: 207 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY 266
             KLG   KAR AF+RAL LD + V ALV L+++ L       IR G++ + +A+ I   
Sbjct: 61  FMKLGNQEKARLAFERALHLDSQCVGALVGLSILKLNQQHPDDIRTGVQMLSKAYTIDST 120

Query: 267 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 324
             M LN+LANHFFF   +  V+ L   A   T +   ++ S Y LAR++H +GDY++A
Sbjct: 121 NPMVLNHLANHFFFKKDYHKVQHLALHAFHNTENEAMRAESCYQLARAFHVQGDYDQA 178


>gi|1732237|gb|AAB38704.1| CTR9 [Saccharomyces cerevisiae]
 gi|392296359|gb|EIW07461.1| Ctr9p [Saccharomyces cerevisiae CEN.PK113-7D]
          Length = 1077

 Score =  152 bits (384), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 240/1012 (23%), Positives = 430/1012 (42%), Gaps = 170/1012 (16%)

Query: 6   IPVQNSEEEVRVALD-QLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQILE 64
           IP++ SEE V + L+  LP D +D+  +L  E +  + WL IA  Y   GK  +  +++E
Sbjct: 21  IPLKASEELVGIDLETDLPDDPTDLKTLLVEENSEKEHWLTIALAYCNHGKTNEGIKLIE 80

Query: 65  EGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRID 124
                 +D +      ER ++   L   +  L K ++   E +EH +   +  N    I 
Sbjct: 81  MA----LDVFQNS---ERASLHTFLTWAHLNLAKGQSLSVETKEHELTQAEL-NLKDAIG 132

Query: 125 MHEPSTWVGKG----QLLLAKGEVEQA---SSAFKIVLEAD--------RDNVPALLGQA 169
             +P TW+G      +L   +G  ++A   S  F   + A+        + N   LL +A
Sbjct: 133 F-DP-TWIGNMLATVELYYQRGHYDKALETSDLFVKSIHAEDHRSGRQSKPNCLFLLLRA 190

Query: 170 CVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPE 229
            + + +  Y  SL+ ++  L ++P      R+GIGLC ++L     A +++QRALQL+P+
Sbjct: 191 KLLYQKKNYMASLKIFQELLVINPVLQPDPRIGIGLCFWQLKDSKMAIKSWQRALQLNPK 250

Query: 230 NVEALVALAVMDLQ------ANEAA---GIRKGMEKMQRAFEIYPYCAMALNYLANHFFF 280
           N  A + + + + +       N+        K +  +   F    +  + L  L  +++F
Sbjct: 251 NTSASILVLLGEFRESFTNSTNDKTFKEAFTKALSDLNNIFSENQHNPVLLTLLQTYYYF 310

Query: 281 TGQHFLVEQLTETALAVTNHGPTK----------SHSYYNLARSYHSKGDYEKAGLYYMA 330
            G +       +T L + +H   K          S S +   R++++ GDY K+ + +  
Sbjct: 311 KGDY-------QTVLDIYHHRILKMSPMIAKIVLSESSFWCGRAHYALGDYRKSFIMFQE 363

Query: 331 SVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYV--- 387
           S+K   K  + +    GLGQ Q+K      ++  FE + +      E    LG +Y    
Sbjct: 364 SLK---KNEDNLLAKLGLGQTQIKNNLLEESIITFENLYKTNESLQELNYILGMLYAGKA 420

Query: 388 -------------QLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKT 434
                        Q    EKA + L +  K+        +     L+ S      + +KT
Sbjct: 421 FDAKTAKNTSAKEQSNLNEKALKYLERYLKLTLATKNQLVISRAYLVISQLYELQNQYKT 480

Query: 435 ARTLLKKAGE-------EVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSK 487
           +   L KA E       E+P+EVLNN+   HF  G+F  A   FK A             
Sbjct: 481 SLDYLSKALEEMEFIKKEIPLEVLNNLACYHFINGDFIKADDLFKQA------------- 527

Query: 488 TKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVL 547
            K  V D   S+                         +T+ +N+AR  E+ +D   +  +
Sbjct: 528 -KAKVSDKDESV------------------------NITLEYNIARTNEK-NDCEKSESI 561

Query: 548 YRLILFKYQDYVDAYLRLAAIAKARNNLQ---LSIELVNEALKVNGKYPNALSMLGDLEL 604
           Y  +   +  Y+ A +R   +  A++ ++   +S E+ N+ L +N       S  G   L
Sbjct: 562 YSQVTSLHPAYIAARIRNLYLKFAQSKIEDSDMSTEM-NKLLDLNKSDLEIRSFYG-WYL 619

Query: 605 KNDDWVKAKETFRAASDAT----DGKDSYATLSLGNWNYFAAL-----RNEKRAPKLEAT 655
           KN    K  E     +  T    +  D+YA +SL N     A      RN K   K + +
Sbjct: 620 KNSKERKNNEKSTTHNKETLVKYNSHDAYALISLANLYVTIARDGKKSRNPKEQEKSKHS 679

Query: 656 HLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPD 715
           +L KA +LY +V+     N++AA G  ++ AE  +   + ++  +V+++          D
Sbjct: 680 YL-KAIQLYQKVLQVDPFNIFAAQGLAIIFAESKRLGPALEILRKVRDSLDNE------D 732

Query: 716 VWINLAHVYFAQGNFALAMKMYQNCLRKF-YYNTDAQILLYLARTHY-------EAEQWQ 767
           V +NLAH Y     +  A++ Y+  L+KF    T   IL  L R  Y           +Q
Sbjct: 733 VQLNLAHCYLEMREYGKAIENYELVLKKFDNEKTRPHILNLLGRAWYARAIKERSVNFYQ 792

Query: 768 DCKKSLLRAIHL-----APSNYTLRFDAGVAMQKFS-ASTLQKTR---RTADEVRSTVAE 818
              ++   A+ L     + S +       +A+  F  A TL+++    RT  +++ ++  
Sbjct: 793 KALENAKTALDLFVKESSKSKFIHSVKFNIALLHFQIAETLRRSNPKFRTVQQIKDSLEG 852

Query: 819 LENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREE---QQNRQ 875
           L+  + +F  L+     ++    ++++   ++  +  + +A + R   E+EE   +Q+ +
Sbjct: 853 LKEGLELFRELNDLKEFNM--IPKEELEQRIQLGETTMKSA-LERSLNEQEEFEKEQSAK 909

Query: 876 RQEAAR---QAALAEEARRKAEEQKKYL-LEK-----RKLEDEQKRLRQQEE 918
             EA +   +  L E+ R K EE+ + L LEK     RKL+DE ++L Q+ E
Sbjct: 910 IDEARKILEENELKEQERMKQEEEARRLKLEKQAEEYRKLQDEAQKLIQERE 961


>gi|449542803|gb|EMD33781.1| hypothetical protein CERSUDRAFT_117863 [Ceriporiopsis subvermispora
           B]
          Length = 1127

 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 219/992 (22%), Positives = 404/992 (40%), Gaps = 179/992 (18%)

Query: 13  EEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQILEEGSSPEID 72
           E + + LD L  +  D++D+L+  +    +W  +A EY++ G ++  ++I E       +
Sbjct: 26  EVISIELDNLDPNPQDMIDLLREGRCKGWIWTTLAAEYWRNGYLDGAQKIGEVAKDYCDN 85

Query: 73  EYYADVRYERIAILNALGVYYTYLG-----------KIETKQREKEEHFILATQYYN--- 118
           +      Y   A+L  L V   Y             K+   +R KE+++  A   +N   
Sbjct: 86  DPQLGSVYPVFALLANLQVARAYKAPKMILSSARQDKLHA-ERPKEDYYTDAASLFNLGE 144

Query: 119 --KASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 176
              A   D     + + +G L L+K  + +A  +F+ VL     N+ ALLG+A + +   
Sbjct: 145 KKAAEAGDAGNVLSLLTRGILQLSKRSMSEAQRSFESVLAQKPTNIVALLGKAKILYATR 204

Query: 177 RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEA--L 234
           +Y  +L+ ++R LQ+ P C    R+GIGLC + +GQ  KA+ A+QR+++++P    A  L
Sbjct: 205 QYPQALKLFQRVLQLSPQCLPDPRIGIGLCLWAMGQKEKAKAAWQRSVEVNPSEWPAQLL 264

Query: 235 VALAVMDLQANEAAGIRK-------GMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLV 287
           + +  ++   NE     +       G   ++RAF+     A A N L       GQ+   
Sbjct: 265 LGIEAINTSKNENQSEEERLSEFLLGTRFVERAFKANQTNAAAANVLCELTIQKGQYKRA 324

Query: 288 EQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYG 347
           E+L E  +   +     S  Y    R   ++G  + A  +Y A  KE ++P+  I    G
Sbjct: 325 EKLAERVIQFADTKTLLSEGYIRAGRITQAEGIAQDAFKHY-AKAKEGSQPN--IVASVG 381

Query: 348 LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYV-------------QLGQIEK 394
           + Q+QLK  +  +A+   + +L+  P    + +A+  +               Q  + ++
Sbjct: 382 IAQLQLKNDEIPAAIHTLDTLLQ-QPSGERSAEAIAMLASLRAHPRPGVSSTDQAQEKQR 440

Query: 395 AQELLRKAAKI-----DP--------------------RDAQAFIDLGELLISSDTGAAL 429
           A+ELL +  +I     DP                    +D    +++ +L    +     
Sbjct: 441 ARELLERVCRILHLPEDPHSQTANGSSTPLTRSQRKVAQDVDLHVEIAKLWQGENNDRME 500

Query: 430 DAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTK 489
            A++ A  L +  G   P  ++NN+ V+   +G+   A   ++ AL D   L    ++  
Sbjct: 501 RAYQEAARLSEAGGRADP-RIVNNLAVLKHLEGDASQARSLYEKALTDAAGLDPAVAEGM 559

Query: 490 TYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYR 549
           +                                   ++L+NLAR  E   + V A   Y 
Sbjct: 560 S----------------------------------TSILYNLARAYEDQGEIVMARDAYE 585

Query: 550 LILFKYQDYVD------------------AYLRLAAIAKARNNLQLSIELVNEALKVNGK 591
            +L ++ +YVD                  A LR A +    N    + +L+ ++L     
Sbjct: 586 KLLNRHPEYVDGESDPCLASLCMYGFRSAAKLRQARVLADMNRKDEAHDLIKQSLVSQKS 645

Query: 592 YPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRNEKRAP- 650
             N  +      +++     AK+   +     D  D YA  + G   Y  A  +   +P 
Sbjct: 646 DLNIRAFYTHFLIQSGTPKPAKDFVFSTLKDHDKHDLYALCAAGWIQYHQARESRDSSPP 705

Query: 651 --KLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEK------------GQFDVSK- 695
             +      +++ E Y + +        AA G  +V AE             G  +  K 
Sbjct: 706 GVQERKRGFQRSAEFYEKALHLDPMCAVAAQGLAIVTAEDALGNLGGSLGPMGPDEAQKR 765

Query: 696 --------DLFTQVQEAAS-GSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYY 746
                   D+F +V+E+ + GSV+        N+ H Y+A+  F  A++ Y+   ++FY 
Sbjct: 766 IKDARDALDIFAKVRESINDGSVYA-------NMGHCYYARDEFDRAIESYETASKRFYN 818

Query: 747 NTDAQILLYLARTHYEAEQWQDCKKSLL--------RAIHLAPSNYTLRFDAGVAMQKFS 798
           N D  +LLYL R+ Y A+  +D   S +        +A HL P +  + ++  +  QK +
Sbjct: 819 NQDVPVLLYLCRSWY-AKANKDQSFSAMATSLQYAQKAYHLHPWDKAILYNIAMIQQKAA 877

Query: 799 ASTLQ--KTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLL 856
              L     +R+  E+   + +  +A ++F+ L+          DE  +   + Y + + 
Sbjct: 878 EMLLSVPPAKRSLKELERAIEQAGHAQKLFASLAQ---------DESPV---IPYSREIA 925

Query: 857 DAAKIHREAAER--EEQQNRQRQ-EAARQAAL 885
           D  + + E+  R  +E    QRQ EA  QA L
Sbjct: 926 DQRRKYGESMLRRCDEHLAAQRQWEAEAQAKL 957


>gi|2565014|gb|AAB81882.1| Cdp1p [Saccharomyces cerevisiae]
          Length = 1077

 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 240/1012 (23%), Positives = 430/1012 (42%), Gaps = 170/1012 (16%)

Query: 6   IPVQNSEEEVRVALD-QLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQILE 64
           IP++ SEE V + L+  LP D +D+  +L  E +  + WL IA  Y   GK  +  +++E
Sbjct: 21  IPLKASEELVGIDLETDLPDDPTDLKTLLVEENSEKEHWLTIALAYCNHGKTNEGIKLIE 80

Query: 65  EGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRID 124
                 +D +      ER ++   L   +  L K ++   E +EH +   +  N    I 
Sbjct: 81  MA----LDVFQNS---ERASLHTFLTWAHLNLAKGQSLSVETKEHELTQAEL-NLKDAIG 132

Query: 125 MHEPSTWVGKG----QLLLAKGEVEQA---SSAFKIVLEAD--------RDNVPALLGQA 169
             +P TW+G      +L   +G  ++A   S  F   + A+        + N   LL +A
Sbjct: 133 F-DP-TWIGNMLATVELYYQRGHYDKALETSDLFVKSIHAEDHRSGRQSKPNCLFLLLRA 190

Query: 170 CVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPE 229
            + + +  Y  SL+ ++  L ++P      R+GIGLC ++L     A +++QRALQL+P+
Sbjct: 191 KLLYQKKNYMASLKIFQELLVINPVLQPDPRIGIGLCFWQLKDSKMAIKSWQRALQLNPK 250

Query: 230 NVEALVALAVMDLQ------ANEAA---GIRKGMEKMQRAFEIYPYCAMALNYLANHFFF 280
           N  A + + + + +       N+        K +  +   F    +  + L  L  +++F
Sbjct: 251 NTSASILVLLGEFRESFTNSTNDKTFKEAFTKALSDLNNIFSENQHNPVLLTLLQTYYYF 310

Query: 281 TGQHFLVEQLTETALAVTNHGPTK----------SHSYYNLARSYHSKGDYEKAGLYYMA 330
            G +       +T L + +H   K          S S +   R++++ GDY K+ + +  
Sbjct: 311 KGDY-------QTVLDIYHHRILKMSPMIAKIVLSESSFWCGRAHYALGDYRKSFIMFQE 363

Query: 331 SVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYV--- 387
           S+K   K  + +    GLGQ Q+K      ++  FE + +      E    LG +Y    
Sbjct: 364 SLK---KNEDNLLAKLGLGQTQIKNNLLEESIITFENLYKTNESLQELNYILGMLYAGKA 420

Query: 388 -------------QLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKT 434
                        Q    EKA + L +  K+        +     L+ S      + +KT
Sbjct: 421 FDAKTAKNTSAKEQSNLNEKALKYLERYLKLTLATKNQLVVSRAYLVISQLYELQNQYKT 480

Query: 435 ARTLLKKAGE-------EVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSK 487
           +   L KA E       E+P+EVLNN+   HF  G+F  A   FK A             
Sbjct: 481 SLDYLSKALEEMEFIKKEIPLEVLNNLACYHFINGDFIKADDLFKQA------------- 527

Query: 488 TKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVL 547
            K  V D   S+                         +T+ +N+AR  E+ +D   +  +
Sbjct: 528 -KAKVSDKDESV------------------------NITLEYNIARTNEK-NDCEKSESI 561

Query: 548 YRLILFKYQDYVDAYLRLAAIAKARNNLQ---LSIELVNEALKVNGKYPNALSMLGDLEL 604
           Y  +   +  Y+ A +R   +  A++ ++   +S E+ N+ L +N       S  G   L
Sbjct: 562 YSQVTSLHPAYIAARIRNLYLKFAQSKIEDSDMSTEM-NKLLDLNKSDLEIRSFYG-WYL 619

Query: 605 KNDDWVKAKETFRAASDAT----DGKDSYATLSLGNWNYFAAL-----RNEKRAPKLEAT 655
           KN    K  E     +  T    +  D+YA +SL N     A      RN K   K + +
Sbjct: 620 KNSKERKNNEKSTTHNKETLVKYNSHDAYALISLANLYVTIARDGKKSRNPKEQEKSKHS 679

Query: 656 HLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPD 715
           +L KA +LY +V+     N++AA G  ++ AE  +   + ++  +V+++          D
Sbjct: 680 YL-KAIQLYQKVLQVDPFNIFAAQGLAIIFAESKRLGPALEILRKVRDSLDNE------D 732

Query: 716 VWINLAHVYFAQGNFALAMKMYQNCLRKF-YYNTDAQILLYLARTHY-------EAEQWQ 767
           V +NLAH Y     +  A++ Y+  L+KF    T   IL  L R  Y           +Q
Sbjct: 733 VQLNLAHCYLEMREYGKAIENYELVLKKFDNEKTRPHILNLLGRAWYARAIKERSVNFYQ 792

Query: 768 DCKKSLLRAIHL-----APSNYTLRFDAGVAMQKFS-ASTLQKTR---RTADEVRSTVAE 818
              ++   A+ L     + S +       +A+  F  A TL+++    RT  +++ ++  
Sbjct: 793 KALENAKTALDLFVKESSKSKFIHSVKFNIALLHFQIAETLRRSNPKFRTVQQIKDSLEG 852

Query: 819 LENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREE---QQNRQ 875
           L+  + +F  L+     ++    ++++   ++  +  + +A + R   E+EE   +Q+ +
Sbjct: 853 LKEGLELFRELNDLKEFNM--IPKEELEQRIQLGETTMKSA-LERSLNEQEEFEKEQSAK 909

Query: 876 RQEAAR---QAALAEEARRKAEEQKKYL-LEK-----RKLEDEQKRLRQQEE 918
             EA +   +  L E+ R K EE+ + L LEK     RKL+DE ++L Q+ E
Sbjct: 910 IDEARKILEENELKEQERMKQEEEARRLKLEKQAEEYRKLQDEAQKLIQERE 961


>gi|401882690|gb|EJT46937.1| Pol II transcription elongation factor [Trichosporon asahii var.
           asahii CBS 2479]
          Length = 1147

 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 234/981 (23%), Positives = 409/981 (41%), Gaps = 154/981 (15%)

Query: 14  EVRVALDQLPR-DASDIL-DILKAEQAPLDLWLIIAREYFKQGKVEQFRQILEEG----- 66
           EV + LD L   + +D L D+L    A    W + A E+++ G+ E+  Q+L  G     
Sbjct: 21  EVDIDLDTLGEAEVADALTDLLTDYSAECKEWTLFAGEHWRAGRFERAEQVLLSGIKFFG 80

Query: 67  SSPEIDEYYADVRYERIAILN---ALGVYYTYLGKIETKQREKEEHFILATQYYNKASRI 123
           S   +D       Y  +A L+   A       L + ++   E   H   A +    +   
Sbjct: 81  SGGHVDSVALSNLYAMLAHLHLAWARTAPTVVLSQAKSHYSEATAHLNRADEAMRSSGAN 140

Query: 124 DMHEP-STWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSL 182
              EP S  +GK  L  A+G+   A+   + +L+   DN+PAL  QA ++F R     +L
Sbjct: 141 PDEEPVSLSMGKIILYSARGQQGTAAPLVERLLQRQPDNLPALAAQARLQFARRETGAAL 200

Query: 183 EFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDL 242
             Y++ L ++P+     R+GIGLC + LG   +A  A+ RAL+LDP +  A + LA+ +L
Sbjct: 201 VTYQKILALNPNAQPDPRIGIGLCAWTLGDRVRATMAWDRALELDPSSWAARLMLALANL 260

Query: 243 ----QANEAAGIR-----KGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTET 293
               + N     R     +G+   Q AF++      A   L+      G   L  +L E 
Sbjct: 261 NMAREPNHPMDKRLTYESEGVSHAQNAFKLNNKSTAASLVLSGVAALGGHIELASKLAER 320

Query: 294 ALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQL 353
           A+   ++      S     R     GD   AG+ Y+A+ K  ++ +  +     L Q+ +
Sbjct: 321 AIQYADNKRHVVMSNSERGRLGFVAGDVADAGV-YIAAAKGADQQNVNMMAELTLAQIAI 379

Query: 354 KLGDFRSALTNFEKVLEIY----PDNCETLKALGHIYVQLG---------------QIEK 394
           K G+ R AL   E+  +      P     L A    Y  LG                +  
Sbjct: 380 KNGNLREALNFVEQTAKRLNGKPPLEFTVLHASLLAYPHLGMPADELARNRVTARDMLSG 439

Query: 395 AQELLRKA------AKID--PRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEE- 445
            Q+L+  A      AK+     D+  F++L +L        A+++++TA ++     EE 
Sbjct: 440 IQDLVSNADSDEDWAKLRGIAADSDTFVELAKLWQEESVDKAINSYQTAISIKADLEEED 499

Query: 446 -----------VPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSK-TKTYVI 493
                        I++  N+  ++  +G  E+A   F+DAL          SK TK    
Sbjct: 500 TATQETKPVDYSEIKLKANLAALYALQGHTENAEAMFQDAL----------SKLTKESGP 549

Query: 494 DASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILF 553
           +A A                          K  + ++L R  EQ  D V A   YR +L 
Sbjct: 550 EADAM-------------------------KTVLAYDLGRAFEQGGDIVNAQKWYRDVLH 584

Query: 554 KYQDYVDAYLRLAAIA-------KARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKN 606
           ++ +++++ +RLA +A       +A N L+  +   +  L +   Y N L  +G      
Sbjct: 585 QHPEHMESKVRLAHLATIAGRNVEAHNYLKECLRADDSNLTLRSVYTNFLIGIGSF---- 640

Query: 607 DDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLE--KAKELY 664
               K    F + +   D  D Y   +LG W ++   R  K    +     +  ++ E Y
Sbjct: 641 ----KEALNFTSHTLRLDKTDPYTFTALG-WLHYTLGREAKSQQDVAERPKQYLRSAEAY 695

Query: 665 TRVIVQHTSNLYAANGAGVVLAE--------KGQFDVSKDLFTQVQEAAS-----GSVFV 711
            R +    +N  AA G  + LAE        +     ++D+ T+ + A +     G +  
Sbjct: 696 ERALSLDPTNAVAAQGLAIALAENTLVPKNLQPAPGSAEDVKTRTRLAGNALSVLGRIKD 755

Query: 712 QMPD--VWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDC 769
            +P+  V +N+ H YF +G    A++ Y + L   Y   +  +LLYL R  +     +  
Sbjct: 756 SLPEGPVSVNIGHCYFLRGEEQRAIEAYGSALNS-YGGHNVSVLLYLCRAWFTYATKESN 814

Query: 770 KKSL-------LRAIHLAPSNYTLRFDAGVAMQKFSAST----LQKTRRTADEVRSTVAE 818
             ++        +A+H+ PS+  + ++ G+ +Q  +A+T    L+ ++RT +E+  T+  
Sbjct: 815 VSAMSQALSYATQALHIQPSDRAILYNIGLILQ--NAATIMLDLEPSKRTLEELTHTLKR 872

Query: 819 LENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQE 878
            E A  +F  L+      L  +D    +   ++   +     + R  AE ++Q+  + + 
Sbjct: 873 AEEAASIFRSLADDKAGPL-AYDRNMADQRAKFLDSI-----VSRGQAEVKKQEAYEAEF 926

Query: 879 AARQAALAEEARR-KAEEQKK 898
           AAR     EEARR +AEEQ +
Sbjct: 927 AAR----VEEARRVRAEEQAR 943


>gi|262302933|gb|ACY44059.1| SH2 domain binding protein [Libinia emarginata]
          Length = 178

 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 76/178 (42%), Positives = 110/178 (61%)

Query: 147 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 206
           A + F  VL     N+P+LLG+AC+ FN+  Y  +L FYK+AL+ +P+CP A+RLG+G C
Sbjct: 1   ADAQFNFVLNQSASNIPSLLGKACIAFNKKDYRGALAFYKKALRTNPNCPAAVRLGMGHC 60

Query: 207 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY 266
             KLG   KAR AF+RAL+LD   V ALV LAV++L   +   IR+G++ + +A++I   
Sbjct: 61  FMKLGNQEKARLAFERALELDSMCVGALVGLAVLELNEKKPENIRRGVQMLSKAYDIDST 120

Query: 267 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 324
             M LN+L NHFFF      V  L   A   T +   ++ S Y +AR++H + DY +A
Sbjct: 121 NPMVLNHLGNHFFFKQDFQKVHHLGLHAFHNTENESMRAESCYQMARAFHVQEDYSQA 178



 Score = 39.7 bits (91), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 56/117 (47%), Gaps = 8/117 (6%)

Query: 357 DFRSALTNFEKVLEIYPDNCETLK-ALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFID 415
           D+R AL  ++K L   P+    ++  +GH +++LG  EKA+    +A ++D     A + 
Sbjct: 31  DYRGALAFYKKALRTNPNCPAAVRLGMGHCFMKLGNQEKARLAFERALELDSMCVGALVG 90

Query: 416 LGELLISSDTGAALDAFKTARTLLKKA---GEEVPIEVLNNIGVIHFEKGEFESAHQ 469
           L  L ++       +  +    +L KA       P+ VLN++G   F K +F+  H 
Sbjct: 91  LAVLELNEKKP---ENIRRGVQMLSKAYDIDSTNPM-VLNHLGNHFFFKQDFQKVHH 143


>gi|349581028|dbj|GAA26186.1| K7_Ctr9p [Saccharomyces cerevisiae Kyokai no. 7]
          Length = 1077

 Score =  151 bits (382), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 239/1012 (23%), Positives = 431/1012 (42%), Gaps = 170/1012 (16%)

Query: 6   IPVQNSEEEVRVALD-QLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQILE 64
           IP++ SEE V + L+  LP D +D+  +L  E +  + WL IA  Y   GK  +  +++E
Sbjct: 21  IPLKASEELVGIDLETDLPDDPTDLKTLLVEENSEKEHWLTIALAYCNHGKTNEGIKLIE 80

Query: 65  EGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRID 124
                   +++ +   ER ++   L   +  L K ++   E +EH +   +  N    I 
Sbjct: 81  MAL-----DFFQNS--ERASLHTFLTWAHLNLAKGQSLSVETKEHELTQAEL-NLKDAIG 132

Query: 125 MHEPSTWVGKG----QLLLAKGEVEQA---SSAFKIVLEAD--------RDNVPALLGQA 169
             +P TW+G      +L   +G  ++A   S  F   + A+        + N   LL +A
Sbjct: 133 F-DP-TWIGNMLATVELYYQRGHYDKALETSDLFVKSIHAEDHRSGRQSKPNCLFLLLRA 190

Query: 170 CVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPE 229
            + + +  Y  SL+ ++  L ++P      R+GIGLC ++L     A +++QRALQL+P+
Sbjct: 191 KLLYQKKNYMASLKIFQELLVINPVLQPDPRIGIGLCFWQLKDSKMAIKSWQRALQLNPK 250

Query: 230 NVEALVALAVMDLQ------ANEAA---GIRKGMEKMQRAFEIYPYCAMALNYLANHFFF 280
           N  A + + + + +       N+        K +  +   F    +  + L  L  +++F
Sbjct: 251 NTSASILVLLGEFRESFTNSTNDKTFKEAFTKALSDLNNIFSENQHNPVLLTLLQTYYYF 310

Query: 281 TGQHFLVEQLTETALAVTNHGPTK----------SHSYYNLARSYHSKGDYEKAGLYYMA 330
            G +       +T L + +H   K          S S +   R++++ GDY K+ + +  
Sbjct: 311 KGDY-------QTVLDIYHHRILKMSPMIAKIVLSESSFWCGRAHYALGDYRKSFIMFQE 363

Query: 331 SVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYV--- 387
           S+K   K  + +    GLGQ Q+K      ++  FE + +      E    LG +Y    
Sbjct: 364 SLK---KNEDNLLAKLGLGQTQIKNNLLEESIITFENLYKTNESLQELNYILGMLYAGKA 420

Query: 388 -------------QLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKT 434
                        Q    EKA + L +  K+        +     L+ S      + +KT
Sbjct: 421 FDAKTAKNTSAKEQSNLNEKALKYLERYLKLTLATKNQLVISRAYLVISQLYELQNQYKT 480

Query: 435 ARTLLKKAGE-------EVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSK 487
           +   L KA E       E+P+EVLNN+   HF  G+F  A   FK A             
Sbjct: 481 SLDYLSKALEEMEFTKKEIPLEVLNNLACYHFINGDFIKADDLFKQA------------- 527

Query: 488 TKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVL 547
            K  V D   S+                         +T+ +N+AR  E+ +D   +  +
Sbjct: 528 -KAKVSDKDESV------------------------NITLEYNIARTNEK-NDCEKSESI 561

Query: 548 YRLILFKYQDYVDAYLRLAAIAKARNNLQ---LSIELVNEALKVNGKYPNALSMLGDLEL 604
           Y  +   +  Y+ A +R   +  A++ ++   +S E+ N+ L +N       S  G   L
Sbjct: 562 YSQVTSLHPAYIAARIRNLYLKFAQSKIEDSDMSTEM-NKLLDLNKSDLEIRSFYG-WYL 619

Query: 605 KNDDWVKAKETFRAASDAT----DGKDSYATLSLGNWNYFAAL-----RNEKRAPKLEAT 655
           KN    K  E     +  T    +  D+YA +SL N     A      RN K   K + +
Sbjct: 620 KNSKERKNNEKSTTHNKETLVKYNSHDAYALISLANLYVTIARDGKKSRNPKEQEKSKHS 679

Query: 656 HLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPD 715
           +L KA +LY +V+     N++AA G  ++ AE  +   + ++  +V+++          D
Sbjct: 680 YL-KAIQLYQKVLQVDPFNIFAAQGLAIIFAESKRLGPALEILRKVRDSLDNE------D 732

Query: 716 VWINLAHVYFAQGNFALAMKMYQNCLRKF-YYNTDAQILLYLARTHY-------EAEQWQ 767
           V +NLAH Y     +  A++ Y+  L+KF    T   IL  L R  Y           +Q
Sbjct: 733 VQLNLAHCYLEMREYGKAIENYELVLKKFDNEKTRPHILNLLGRAWYARAIKERSVNFYQ 792

Query: 768 DCKKSLLRAIHL-----APSNYTLRFDAGVAMQKFS-ASTLQKTR---RTADEVRSTVAE 818
              ++   A+ L     + S +       +A+  F  A TL+++    RT  +++ ++  
Sbjct: 793 KALENAKTALDLFVKESSKSKFIHSVKFNIALLHFQIAETLRRSNPKFRTVQQIKDSLEG 852

Query: 819 LENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREE---QQNRQ 875
           L+  + +F  L+     ++    ++++   ++  +  + +A + R   E+EE   +Q+ +
Sbjct: 853 LKEGLELFRELNDLKEFNM--IPKEELEQRIQLGETTMKSA-LERSLNEQEEFEKEQSAK 909

Query: 876 RQEAAR---QAALAEEARRKAEEQKKYL-LEK-----RKLEDEQKRLRQQEE 918
             EA +   +  L E+ R K EE+ + L LEK     RKL+DE ++L Q+ E
Sbjct: 910 IDEARKILEENELKEQERMKQEEEARRLKLEKQAEEYRKLQDEAQKLIQERE 961


>gi|358398556|gb|EHK47907.1| hypothetical protein TRIATDRAFT_46734 [Trichoderma atroviride IMI
            206040]
          Length = 1200

 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 239/1046 (22%), Positives = 432/1046 (41%), Gaps = 200/1046 (19%)

Query: 2    ACVYIPVQNSEEE--VRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQF 59
            + + IPVQ  +E+  V + L+ L  D +++  + + E A    W+ +A  Y KQ K++  
Sbjct: 31   SAIDIPVQGDQEDEAVEIDLEVLVDDPTELCTLFENEHAAKTYWMTVALAYAKQRKIDHA 90

Query: 60   RQIL-------EEGSSPEIDEYYADVRYERIAILNALGVYYTYLGK----------IETK 102
             ++L       + G +P           ++++++  L   Y +  +            ++
Sbjct: 91   IEMLIRGGNAIQSGGNPR----------DKVSMICCLCWMYLWKSREAPRVAPEDANASE 140

Query: 103  QREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLL-----------------AKGEV- 144
             + KE +  LAT   N A+R++      ++ +G LLL                  KGE+ 
Sbjct: 141  TKTKEHYLQLATSSLNDAARLNPSFSPIFLARGVLLLLRASLQGPSKTAGSLGTEKGELL 200

Query: 145  EQASSAFKIVLEADR-DNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSC--PGAIRL 201
            + A+ AF   L   +  NV AL+G+A   F+  +Y ++L  Y+  LQ  P    P   R+
Sbjct: 201  KNAAKAFDDALRVSQGKNVLALMGKARTLFSMHKYPEALAAYQDVLQKRPDLVDPDP-RI 259

Query: 202  GIGLCRYKLGQLGKARQAFQRALQLDPEN--VEALVALAVMDLQANEAAGI--------R 251
            GIG C ++LG    A+ A++R L+++P++   ++L+ L  +D   +             R
Sbjct: 260  GIGCCFWQLGFKDDAKVAWERCLEINPDSKVPKSLLGLYYLDASGHVPVNSPEFPQLYKR 319

Query: 252  KGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNL 311
              ++ +Q +F++     +  +  A++F         ++L   A+  T+     S  +Y L
Sbjct: 320  AMIDYIQDSFKLDKDVPITCSTFASYFLSRKMWDKADKLAHKAIQYTDVNAVASDGWYLL 379

Query: 312  ARSYHSKGDYEKAGLYYMASVKEINKPHEFIFP-YYGLGQVQLKLGDFRSALTNFEKVLE 370
            AR  H  GD E+A  YY  +            P  +G+ Q+ +   D   A    EK+++
Sbjct: 380  ARKAHYNGDLERASDYYRRADDARGGTETGYLPAKFGVAQLSVLKNDLGEAKLRLEKIIQ 439

Query: 371  IYPDNCETLKALGHIYVQ--------------LGQIEKAQELL---RKAAKIDPR----- 408
                N E +  LG IY +                +++KA  LL   R + K DP+     
Sbjct: 440  -QSKNHEAMILLGIIYAEEIFANQSSDIKEDRSAEMKKAVALLEGVRNSWK-DPKKALSP 497

Query: 409  DAQAFIDLGELLISSDTGAALDAFKTARTL-LKKAGE-EVPIEV---------------- 450
            D    ++L  L  +     AL   +    L +++  E E P +V                
Sbjct: 498  DPSVLLNLARLYETDSPDKALQCLQQVEQLEIEQIPESEHPTDVPASELQAALRKFLSPQ 557

Query: 451  -LNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFH 509
             LNNIG  H +  + + A + F+ AL        + +  K   +D  A +          
Sbjct: 558  LLNNIGCFHSQAEKHDLASELFEAALS-----ACMRAGEKDPTMDTDALV---------- 602

Query: 510  RFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIA 569
                            T+ FNL R  E    T  A  +Y  +L ++ DY DA  RLA I 
Sbjct: 603  ---------------TTISFNLGRSYEARGLTDKAVEVYEGLLNRHDDYTDARTRLAYI- 646

Query: 570  KARNNLQLSIELVNEALKVNGKYPNALSML-----GDLEL--------------KNDDWV 610
            K R N              N + P+A++ L      DLE+              K    +
Sbjct: 647  KLRKN-------------PNKEGPDAVAKLYQENTADLEVRALYGWYLGKVHSRKRPANI 693

Query: 611  KAKETFRAASDAT---DGKDSYATLSLGNWNYFAA--LRNEKRAPKLEATHLE-KAKELY 664
            +    FR         D  D YA + +GN     A  +R E    K + + +  KA E +
Sbjct: 694  QEDHEFRHYKHTLQNYDKHDRYALVGMGNLYLLQAREMRRETEPEKQKRSAIYCKAVEFF 753

Query: 665  TRVIVQHTSNLYAANGAGVVLAE-KGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHV 723
             + +     N YAA G  + L E +     +  +F +V++    S       +++NL H+
Sbjct: 754  EKALSLDPKNAYAAQGIAIALVEDRKDLKTALTIFNKVRDTVKDS------HLYVNLGHI 807

Query: 724  YFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLART-------HYEAEQWQDCKKSLLRA 776
            +     F  A++ Y+  L K   + D  IL  L RT         + + +    +   +A
Sbjct: 808  FAELKQFTKAIEHYEIALSKDGKSNDPVILSCLGRTWLNRGRADRDVDSYNKALECAKKA 867

Query: 777  IHLAPSNYTLRFD-AGVAMQKFSA-STLQKTRRTADEVRSTVAELENAVRVFSHLSAASN 834
            + +AP     +F+ A V +Q  +   TL ++RRTA+++      LE A+     ++A   
Sbjct: 868  LEVAPDQIHYKFNVAFVQIQLVTTIQTLPESRRTAEQLEEASEGLEAAIESLDMIAAHPQ 927

Query: 835  LHLHGFD-EKKINTHVEYCKHLLDAAKIHREAAERE-EQQNRQRQEAARQAALAEEARRK 892
                  D E++ N      +  L+ A       ++E E++N ++  AA++   AE  +R 
Sbjct: 928  TPYPKHDVEQRANMARNTLRKQLERAL----GKQKEWEEKNMEKIVAAKEQREAEIKKR- 982

Query: 893  AEEQKKYLLEKRKLEDEQKRLRQQEE 918
             EE+++ +L+K +  + Q+++R++ E
Sbjct: 983  -EEERQAVLDKER--ERQEKIRKERE 1005


>gi|262302921|gb|ACY44053.1| SH2 domain binding protein [Hutchinsoniella macracantha]
          Length = 178

 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 75/178 (42%), Positives = 112/178 (62%)

Query: 147 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 206
           A + F  VL    +N+PA LG+AC+ F++  Y  +L +YK+AL+ +P+CP A+RLG+G C
Sbjct: 1   ADAQFNFVLNQSPNNIPAGLGKACIAFSKKDYRGALAYYKKALRANPNCPAAVRLGMGHC 60

Query: 207 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY 266
             KLG   KAR AF+RAL+LDP  V ALV LA++++       I+ G++K+  A+ I   
Sbjct: 61  FMKLGNEDKARLAFERALELDPHCVGALVGLAILEINQETPETIKSGVQKLSTAYTIDST 120

Query: 267 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 324
             M LN+LANHFFF   +  V+ L   A   T +   ++ S Y LAR++H + DY++A
Sbjct: 121 NPMVLNHLANHFFFKKDYHKVQHLALHAFHNTENEYMRAESCYQLARAFHVQRDYDQA 178



 Score = 43.1 bits (100), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 24/82 (29%), Positives = 44/82 (53%), Gaps = 3/82 (3%)

Query: 347 GLGQVQLKLG--DFRSALTNFEKVLEIYPDNCETLK-ALGHIYVQLGQIEKAQELLRKAA 403
           GLG+  +     D+R AL  ++K L   P+    ++  +GH +++LG  +KA+    +A 
Sbjct: 19  GLGKACIAFSKKDYRGALAYYKKALRANPNCPAAVRLGMGHCFMKLGNEDKARLAFERAL 78

Query: 404 KIDPRDAQAFIDLGELLISSDT 425
           ++DP    A + L  L I+ +T
Sbjct: 79  ELDPHCVGALVGLAILEINQET 100


>gi|157939595|gb|ABW05522.1| SH2 domain binding protein [Lithobius forticatus]
          Length = 177

 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 72/177 (40%), Positives = 113/177 (63%)

Query: 147 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 206
           A + F  VL    +N+P+LLG+AC+ FN+     +L FYK+AL+ +P+CP A+RLG+G C
Sbjct: 1   ADAQFNXVLNQSPNNIPSLLGKACIAFNKKDPRGALAFYKKALRTNPNCPAAVRLGMGHC 60

Query: 207 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY 266
             +LG+  KAR AF+RAL +D + V ALV +++++L       IR G++ + RA+ I   
Sbjct: 61  FMRLGKPDKARLAFERALNMDSQCVGALVGISILELNNKTPDAIRNGVQMLSRAYAIDST 120

Query: 267 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEK 323
             M LN+LANHFFF   +  V+ L   A+  T +   ++ S Y LAR++H +GD+++
Sbjct: 121 NPMVLNHLANHFFFKKDYQKVQHLALHAIHNTENEAMRAESCYQLARAFHVQGDFDQ 177


>gi|239608951|gb|EEQ85938.1| conserved hypothetical protein [Ajellomyces dermatitidis ER-3]
 gi|327354032|gb|EGE82889.1| tetratricopeptide repeat domain-containing protein [Ajellomyces
           dermatitidis ATCC 18188]
          Length = 1246

 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 221/962 (22%), Positives = 379/962 (39%), Gaps = 200/962 (20%)

Query: 2   ACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQ 61
           + + IP    + EV ++L++LP D +++  +L  E+A  + W+IIA  Y KQ +++    
Sbjct: 29  SAIDIPASTFDSEVEISLEELPDDPTELCTLLDNEKAAKNFWVIIALAYAKQNQIDHAID 88

Query: 62  ILEEGSSPEIDEYYADVRYERIAILNALGVYYTYL----------GKIETKQREKEEHFI 111
           IL  G    +      V  E++ +L  +   Y             G++ ++ + K+ +  
Sbjct: 89  ILNRG----LSSLAQGVTKEKLGLLGWICWLYMLKSREAPRVAPEGQLVSEAKTKDYYLQ 144

Query: 112 LATQYYNKASRIDMHEPSTWVGKGQLLLAKGE------------------VEQASSAFKI 153
            AT   N+ASR++   P  ++ +G L + +                    VE    A K 
Sbjct: 145 AATSTLNEASRLNPAFPPLFLARGVLSILRASLQPPAKTLRPGTVDTSERVESLRQALKC 204

Query: 154 VLEADRD----NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGA-IRLGIGLCRY 208
             E+ +     N+ A+LG+A  ++  GRY+++LE Y+  L   P+      R+GIG C +
Sbjct: 205 FDESAKSFGNRNIMAILGRARAQYMLGRYAEALEGYQEVLIKMPNMRDPDPRIGIGCCLW 264

Query: 209 KLGQLGKARQAFQRALQLDPENVEALVALAVMDL------QANEAAG---IRKGMEK-MQ 258
           +L    +A+ A+ RAL L+PE+  A + L    L        N+ A     +  M +  Q
Sbjct: 265 QLDFKEQAKTAWSRALALNPESKVANILLGAYYLYDSSRHATNDPAFGSLYKIAMTQYTQ 324

Query: 259 RAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSK 318
           +AF++     M       +F        VE L   A+ +T+     S  +Y LAR  H +
Sbjct: 325 KAFKLDKEDPMTCAMFGGYFLLRKHFPTVEALARKAIELTDVNAIASDGWYLLARKEHFE 384

Query: 319 GDYEKAGLYYMASVKEINKPHEFIFP-YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCE 377
            +  +A  YY  S +      +   P  +G  Q+Q+K GD+  A    EK+++    N E
Sbjct: 385 DNAARANEYYNRSDQARGGSDKGYLPAKFGAVQMQVKTGDYDGAKFRLEKIIQ-QTKNPE 443

Query: 378 TLKALGHIYVQ--------------LGQIEKAQELLRKA--------AKIDPRDAQAFID 415
           ++  LG ++ +                +++KA  LL            K+ P D    + 
Sbjct: 444 SMTLLGALFAEEVFAAQSSQLKEDKSAEVKKATSLLESVRASWKDEKKKLSP-DESVLLY 502

Query: 416 LGELLISSDTGAAL-----------------------DAFKTARTLLKKAGEEVPIEVLN 452
           L  L  S     ++                       D  +T + +L+   E +  ++LN
Sbjct: 503 LARLYESGSPDKSMQCLQQVEQMQLAQIPDTERPEDIDDEETVKNMLR---ENLAPQLLN 559

Query: 453 NIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFE 512
           N+G   +   + E A   F+ AL   +     D  T T  +                   
Sbjct: 560 NMGCFLYHSEKIELARNMFQTALNACVKSRDRDDSTDTDAL------------------- 600

Query: 513 NDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKAR 572
                        T+ +NLAR  E       A  +Y  +L ++ DY +A  RL  IA   
Sbjct: 601 -----------VTTISYNLARTYEAAAMPEEAKKVYEGLLERHSDYTEANARLTYIA--- 646

Query: 573 NNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDD------WVKAKETFRAASDATDGK 626
               L     +E        P  ++ L +LE  N +      W  +K   + A+ A D +
Sbjct: 647 ----LRQSPTDEG-------PKKMAKLYELESTNLEVRALFGWYLSKSKRKVANIAEDHE 695

Query: 627 --------------DSYATLSLGNWNYFAALRNEKRAPKLEATH----LEKAKELYTRVI 668
                         D Y+   +GN  Y  A R+ +R  + +        EKA E + + +
Sbjct: 696 QRHYKHTLQGYDKHDRYSLTGMGNI-YLLAARDMRRDTEQDKEKRRKVYEKAVEFFDKAL 754

Query: 669 VQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPD------VWINLAH 722
                N YAA G  V L      D  KD  T VQ      +F ++ D      V++NL H
Sbjct: 755 QLDPKNAYAAQGIAVAL-----VDDRKDYTTAVQ------IFSRIRDTLRDASVYLNLGH 803

Query: 723 VYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQ----------DCKKS 772
           VY     F+ +++ Y+  L K     D QIL  L R        +          DC + 
Sbjct: 804 VYAELRQFSRSIENYEAALSKD-RQRDTQILACLGRVWLLKGMQENNLAAMNTALDCTQ- 861

Query: 773 LLRAIHLAPSNYTLRFDAGVAMQKFS--ASTLQKTRRTADEVRSTVAELENAVRVFSHLS 830
             RA  +AP    L F+      + +    +L +++RT  +V++    L+ A+  F  ++
Sbjct: 862 --RARAIAPEQIHLEFNVAFVQNQIALLVISLPESQRTLQDVQAASDGLDEAINTFIQIA 919

Query: 831 AA 832
            A
Sbjct: 920 KA 921


>gi|262302961|gb|ACY44073.1| SH2 domain binding protein [Pedetontus saltator]
          Length = 178

 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 74/178 (41%), Positives = 111/178 (62%)

Query: 147 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 206
           A + F  VL    +N+P+LLG+AC+ FN+  +  +L +YK+AL+ +P+CP A+RLG+  C
Sbjct: 1   ADAQFNFVLNQSPNNIPSLLGKACIAFNKKDHRGALAYYKKALRTNPNCPAAVRLGMAHC 60

Query: 207 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY 266
             KLG   KAR AF+RALQLD   V ALV L+++ L       IR G++ + +A+ I   
Sbjct: 61  FMKLGNQEKARLAFERALQLDSMCVGALVGLSILKLNQQNPDDIRTGVQMLSKAYTIDST 120

Query: 267 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 324
             M LN+LANHFFF   +  V+ L   A   T +   ++ S Y LAR++H +GD+++A
Sbjct: 121 NPMVLNHLANHFFFKKDYHKVQHLALHAFHNTENEAMRAESCYQLARAFHVQGDFDQA 178


>gi|157939599|gb|ABW05524.1| SH2 domain binding protein [Nebalia hessleri]
          Length = 177

 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 76/177 (42%), Positives = 110/177 (62%)

Query: 147 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 206
           A + F  VL    +N+P+LLG+AC+ +N+  Y  +L FYK+AL+ +P+CP A+RLG+G C
Sbjct: 1   ADAQFHFVLNQAPNNIPSLLGKACIAYNKKDYRGALAFYKKALRTNPNCPAAVRLGMGHC 60

Query: 207 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY 266
             KLG   KAR AF+RAL+LD   V ALV LAV++L   +A  IR+G++ +  A+ I   
Sbjct: 61  FMKLGNQDKARLAFERALELDMNCVGALVGLAVLELNEKKAESIRRGVQMLSTAYTIDST 120

Query: 267 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEK 323
             M LN+L NHFFF      V+ L   A   T +   ++ S Y +AR+YH + DY +
Sbjct: 121 NPMVLNHLGNHFFFKHDFQKVQHLALHAFHNTENEAMRAESCYQMARAYHVQEDYSQ 177


>gi|349804747|gb|AEQ17846.1| hypothetical protein [Hymenochirus curtipes]
          Length = 341

 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 94/273 (34%), Positives = 155/273 (56%), Gaps = 30/273 (10%)

Query: 658 EKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVW 717
           ++A  +Y +V+   + NLYAANG G VLA KG    ++D+F QV+EA +      + DVW
Sbjct: 96  QRALAIYKQVLRNDSKNLYAANGIGAVLAHKGYVREARDVFAQVREATAD-----ISDVW 150

Query: 718 INLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAI 777
           +NLAH+Y  Q  F  A++MY+NCLRKFY + + ++LLYLAR  ++  + Q+CK+ +L+A 
Sbjct: 151 LNLAHIYVEQKQFIRAVQMYENCLRKFYKHQNTEVLLYLARALFKCGKLQECKQ-ILKAR 209

Query: 778 HLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHL 837
           H+AP++  L F+  + +Q+ +   L K      EV + V ELE A R F++LS       
Sbjct: 210 HVAPNDTVLMFNVALVLQRLATLVL-KDESNLKEVLNAVKELELAHRYFNYLSKVG---- 264

Query: 838 HGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEAARQAALAEEARRKAEEQK 897
              D+ + +     C  LL  A+ H   A +++++ +             E R K E++K
Sbjct: 265 ---DKMRFDLQ---CSDLLSQAQYHVARARKQDEEEK-------------ELRAKQEQEK 305

Query: 898 KYLLEKRKLEDEQKRLRQQEEHFQRVKARIFYI 930
           + L +K   E E+KRL++ EE  + ++ R  ++
Sbjct: 306 EVLRQKLMKEQEEKRLKEIEEQKKLLEQRAQFV 338



 Score = 73.2 bits (178), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 112/241 (46%), Gaps = 25/241 (10%)

Query: 4   VYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQIL 63
           + IP+++++E + +  DQLP +  +++ ILK E   L +W+ +A EYFKQGK E F ++L
Sbjct: 6   IEIPLRDTDEVIELDFDQLP-EGDEVISILKQEHTQLHIWIALALEYFKQGKTEDFVKLL 64

Query: 64  EEGS-SPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASR 122
           E       +D  Y D   +++  L+ L  YY        +QR        A   Y +  R
Sbjct: 65  EAARIDGNLD--YRDHEKDQMTCLDTLAAYY-------VQQR--------ALAIYKQVLR 107

Query: 123 IDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSL 182
            D        G G +L  KG V +A   F  V EA  D     L  A +   + ++  ++
Sbjct: 108 NDSKNLYAANGIGAVLAHKGYVREARDVFAQVREATADISDVWLNLAHIYVEQKQFIRAV 167

Query: 183 EFYKRALQ---VHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAV 239
           + Y+  L+    H +    + L   L  +K G+L + +Q   +A  + P +   +  +A+
Sbjct: 168 QMYENCLRKFYKHQNTEVLLYLARAL--FKCGKLQECKQIL-KARHVAPNDTVLMFNVAL 224

Query: 240 M 240
           +
Sbjct: 225 V 225


>gi|296808941|ref|XP_002844809.1| tetratricopeptide repeat protein 1 [Arthroderma otae CBS 113480]
 gi|238844292|gb|EEQ33954.1| tetratricopeptide repeat protein 1 [Arthroderma otae CBS 113480]
          Length = 1628

 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 232/1015 (22%), Positives = 408/1015 (40%), Gaps = 200/1015 (19%)

Query: 2    ACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQ 61
            + + IP    + EV ++L +LP D +++  +L  E+A  + W+IIA  Y KQ +++   +
Sbjct: 468  SAIDIPASTFDSEVEISLQELPDDPTELCTLLDNEKAAKNFWVIIALAYAKQKQIDHAIE 527

Query: 62   ILEEGSSPEIDEYYADVRYERIAILNALGVYYTYL------------GKIETKQREKEEH 109
            IL  G    +         E++++L    + + YL            G++ ++ + KE +
Sbjct: 528  ILTRG----LASLAHGATKEKLSLLG--WICWLYLIKSRQAPRVAPEGQLYSEAKTKEFY 581

Query: 110  FILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE------------------VEQASSAF 151
               AT   N+ASR++   P  ++ +G L + +                    VE    A 
Sbjct: 582  LQAATATLNEASRLNPAFPPLFLARGVLSILRASLQPPSKPVRPGTVDTSERVESLQQAI 641

Query: 152  KIVLEADR----DNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSC--PGAIRLGIGL 205
            K   E+ +     N+ A+LG+A   +  GRY ++LE Y+ AL   P+   P   R+GIG 
Sbjct: 642  KCFDESSKAFGGRNIMAILGRARANYMLGRYGEALEGYQEALVKMPNMRDPDP-RIGIGC 700

Query: 206  CRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQAN--------EAAGIRKG--ME 255
            C ++L    +A+ A+ RAL L+P++  A + LA   L  +        E + + K    +
Sbjct: 701  CLWQLDFKDQAKVAWNRALTLNPDSKAANILLAAYYLHDSSRHSTSDPEFSSLYKTAMTQ 760

Query: 256  KMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSY 315
              Q+AF++     M      ++F        VE L   A+ +T+     S  +Y LAR  
Sbjct: 761  YTQKAFKLDKEYPMTCATFGSYFLLRKHFPTVEALARKAIELTDVNAIASDGWYLLARKE 820

Query: 316  HSKGDYEKAGLYYMASVKEINKPHEFIFPY-YGLGQVQLKLGDFRSALTNFEKVLEIYPD 374
            H++GD E+A  YY  S +      +   P  +G  Q+ +K  DF  A    EK+++    
Sbjct: 821  HTEGDPERALEYYNRSDQARGGADKGYPPAKFGAVQMLVKRKDFDGAKFRLEKIIQ-QTK 879

Query: 375  NCETLKALGHIYV------------QLGQIEKAQELL---RKAAKIDPR----DAQAFID 415
            N E +  LG +Y             +  + +KA  LL   R + K D +    D    + 
Sbjct: 880  NPEAMALLGSLYADEVFAASNSKEDKSAEAKKAISLLESVRTSWKADKKKLTPDESVLLY 939

Query: 416  LGELLISSDTGAAL--------------------DAFKTARTLLKKAGEEVPIEVLNNIG 455
            L  L   S    ++                    D  +  + + +   E +  ++LNNIG
Sbjct: 940  LSRLYEVSAPEKSMQCLNQVEEMQLAQIPEDERPDDVEGEKAMTEVLRERLAPQLLNNIG 999

Query: 456  VIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDG 515
               ++  + E A    + AL        + ++ +    D  A +                
Sbjct: 1000 CFLYQADKIEQARNMLQTALN-----ACVKAQEREDASDTDAYV---------------- 1038

Query: 516  NHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNL 575
                      T+ +NLAR  E       A  +Y  +L ++ DYV+A  RL  IA      
Sbjct: 1039 ---------TTISYNLARTYEAAGMPNEAKKVYEGLLERHSDYVEANARLTYIA------ 1083

Query: 576  QLSIELVNEALKVNGKYPNALSMLGDLELKNDD------WVKAKETFRAASDAT------ 623
             L     +E        P  ++ L + E  N +      W  +K   R A+ A       
Sbjct: 1084 -LRQSPTDEG-------PKKMAKLYEAEATNMEVRALFGWYLSKSKRRVANLAEDLEQRH 1135

Query: 624  --------DGKDSYATLSLGNWNYFAALRNEKRAPKLEATH----LEKAKELYTRVIVQH 671
                    D  D YA   +GN  Y    R+ +R  + +        EKA E + + +   
Sbjct: 1136 YKHTLQGYDKHDRYALTGMGNL-YLLTGRDMRRDGEQDKEKRRKIYEKAVEFFDKALQLD 1194

Query: 672  TSNLYAANGAGVVLA-EKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNF 730
              N YAA G  + L  ++  +  +  +F++V++    S       V++NL HV+     F
Sbjct: 1195 PKNAYAAQGIAIALVDDRKDYSTAVQIFSKVRDTLRDS------SVYLNLGHVFAELRQF 1248

Query: 731  ALAMKMYQNCLRKFYYNTDAQILLYLARTHY---EAEQWQDCKKSLL----RAIHLAPSN 783
                K  +N   +     DAQIL  L R  +   + EQ     K+ L    RA  +AP  
Sbjct: 1249 T---KSIENDRAR-----DAQILACLGRVWFLKGKQEQNLSAMKTALEYAERARSVAPDQ 1300

Query: 784  YTLRFDAGVAMQKFS--ASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGFD 841
              L F+      +    A +L + ++T++EV   +  +  A+  F  ++ + N     + 
Sbjct: 1301 IHLEFNIAFVQNEIGLLAISLPEAQKTSEEVEEAMNGVTAAIEAFDKIANSKN---PPYP 1357

Query: 842  EKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEAARQAALAEEAR--RKAE 894
               + +    C++ +      R   +R  Q  ++ +E  + AA  ++AR  R AE
Sbjct: 1358 RSSLESRATMCRNTI------RNQLQRTLQSQKEYEE--KNAAKLQQARELRDAE 1404


>gi|262302937|gb|ACY44061.1| SH2 domain binding protein [Plathemis lydia]
          Length = 175

 Score =  150 bits (380), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 77/175 (44%), Positives = 109/175 (62%), Gaps = 1/175 (0%)

Query: 151 FKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS-CPGAIRLGIGLCRYK 209
           F  VL     +VPALLG+AC+ F R  +  +L FYK+AL+  P+ CP  +RLG+G C  K
Sbjct: 1   FNFVLNQSPGSVPALLGKACIAFGRKDFRGALAFYKKALRTSPAACPATVRLGMGHCFMK 60

Query: 210 LGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAM 269
           LG   KAR AF+RAL+LD   V ALV LA++ L   E   IR G++ + +A+ I     M
Sbjct: 61  LGNQEKARLAFERALELDNSCVGALVGLAILQLNLQEPDSIRSGVQMLSKAYTIDSTNPM 120

Query: 270 ALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 324
            LN+LANHFFF   +  V+ L   A+  T +   ++ S+Y LAR++H +GDY++A
Sbjct: 121 VLNHLANHFFFKKDYHKVQHLALHAIHNTENEAMRAESFYQLARAFHVQGDYDQA 175


>gi|323307343|gb|EGA60622.1| Ctr9p [Saccharomyces cerevisiae FostersO]
          Length = 1040

 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 240/1020 (23%), Positives = 431/1020 (42%), Gaps = 186/1020 (18%)

Query: 6   IPVQNSEEEVRVALD-QLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQILE 64
           IP++ SEE V + L+  LP D +D+  +L  E +  + WL IA  Y   GK  +  +++E
Sbjct: 21  IPLKASEELVGIDLETDLPDDPTDLKTLLVEENSEKEHWLTIALAYCNHGKTNEGIKLIE 80

Query: 65  EGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRID 124
                 +D +      ER ++   L   +  L K ++   E +EH +   +  N    I 
Sbjct: 81  MA----LDVFQNS---ERASLHTFLTWAHLNLAKGQSLSVETKEHELTQAEL-NLKDAIG 132

Query: 125 MHEPSTWVGKG----QLLLAKGEVEQA---SSAFKIVLEAD--------RDNVPALLGQA 169
             +P TW+G      +L   +G  ++A   S  F   + A+        + N   LL +A
Sbjct: 133 F-DP-TWIGNMLATVELYYQRGHYDKALETSDLFVKSIHAEDHRSGRQSKPNCLFLLLRA 190

Query: 170 CVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPE 229
            + + +  Y  SL+ ++  L ++P      R+GIGLC ++L     A +++QRALQL+P+
Sbjct: 191 KLLYQKKNYMASLKIFQELLVINPVLQPDPRIGIGLCFWQLKDSKMAIKSWQRALQLNPK 250

Query: 230 NVEALVALAVMDLQ------ANEAA---GIRKGMEKMQRAFEIYPYCAMALNYLANHFFF 280
           N  A + + + + +       N+        K +  +   F    +  + L  L  +++F
Sbjct: 251 NTSASILVLLGEFRESFTNSTNDKTFKEAFTKALSDLNNIFSENQHNPVLLTLLQTYYYF 310

Query: 281 TGQHFLVEQLTETALAVTNHGPTK----------SHSYYNLARSYHSKGDYEKAGLYYMA 330
            G +       +T L + +H   K          S S +   R++++ GDY K+ + +  
Sbjct: 311 KGDY-------QTVLDIYHHRILKMSPMIAKIVLSESSFWCGRAHYALGDYRKSFIMFQE 363

Query: 331 SVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYV--- 387
           S+K   K  + +    GLGQ Q+K      ++  FE + +      E    LG +Y    
Sbjct: 364 SLK---KNEDNLLAKLGLGQTQIKNNLLEESIITFENLYKTNESLQELNYILGMLYAGKA 420

Query: 388 -------------QLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKT 434
                        Q    EKA + L +  K+        +     L+ S      + +KT
Sbjct: 421 FDAKTAKNTSAKEQSNLNEKALKYLERYLKLTLATKNQLVISRAYLVISQLYELQNQYKT 480

Query: 435 ARTLLKKAGE-------EVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSK 487
           +   L KA E       E+P+EVLNN+   HF  G+F  A   FK A             
Sbjct: 481 SLDYLSKALEEMEFIKKEIPLEVLNNLACYHFINGDFIKADDLFKQA------------- 527

Query: 488 TKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVL 547
            K  V D   S+                         +T+ +N+AR  E+ +D   +  +
Sbjct: 528 -KXKVXDKDESV------------------------NITLEYNIARTNEK-NDCEKSESI 561

Query: 548 YRLILFKYQDYVDAYLRLAAIAKARNNLQ---LSIELVNEALKVNGKYPNALSMLGDLE- 603
           Y  +   +  Y+ A +R   +  A++ ++   +S E+ N+ L +N           DLE 
Sbjct: 562 YSQVXSLHPAYIAARIRNLYLKFAQSKIEDSDMSTEM-NKLLDLNK---------SDLEI 611

Query: 604 -------LKNDDWVKAKETFRAASDAT----DGKDSYATLSLGNWNYFAAL-----RNEK 647
                  LKN    K  E     +  T    +  D+YA +SL N     A      RN K
Sbjct: 612 RSFYAWYLKNSKERKNNEKSTTHNKETLVKYNSHDAYALISLANLYVTIARDGKKSRNPK 671

Query: 648 RAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASG 707
              K + ++L KA +LY +++     N++AA G  ++ AE  +   + ++  +V+++   
Sbjct: 672 EQEKSKHSYL-KAIQLYQKILQVDPFNIFAAQGLAIIFAESKRLGPALEILRKVRDSLDN 730

Query: 708 SVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKF-YYNTDAQILLYLARTHY----- 761
                  DV +NLAH Y     +  A++ Y+  L+KF    T   IL  L R  Y     
Sbjct: 731 E------DVQLNLAHCYLEMREYGKAIENYELVLKKFDNEKTRPHILNLLGRAWYARAIK 784

Query: 762 --EAEQWQDCKKSLLRAIHL-----APSNYTLRFDAGVAMQKFS-ASTLQKTR---RTAD 810
                 +Q   ++   A+ L     + S +       +A+  F  A TL+++    RT  
Sbjct: 785 ERSVNFYQKALENAKTALDLFVKESSKSKFIHSVKFNIALLHFQIAETLRRSNPKFRTVQ 844

Query: 811 EVRSTVAELENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREE 870
           +++ ++  L+  + +F  L+     ++    ++++   ++  +  + +A + R   E+EE
Sbjct: 845 QIKDSLEGLKEGLELFRELNDLKEFNM--IPKEELEQRIQLGETTMKSA-LERSLNEQEE 901

Query: 871 ---QQNRQRQEAAR---QAALAEEARRKAEEQKKYL-LEK-----RKLEDEQKRLRQQEE 918
              +Q+ +  EA +   +  L E+ R K EE+ + L LEK     RKL+DE ++L Q+ E
Sbjct: 902 FEKEQSAKIDEARKILEENELKEQERMKQEEEARRLKLEKQAEEYRKLQDEAQKLIQERE 961


>gi|406700720|gb|EKD03885.1| Pol II transcription elongation factor [Trichosporon asahii var.
           asahii CBS 8904]
          Length = 1147

 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 233/985 (23%), Positives = 414/985 (42%), Gaps = 162/985 (16%)

Query: 14  EVRVALDQLPR-DASDIL-DILKAEQAPLDLWLIIAREYFKQGKVEQFRQILEEGSSPEI 71
           EV + LD L   + +D L D+L    A    W + A E+++ G+ E+  Q+L  G    I
Sbjct: 21  EVDIDLDTLGEAEVADALTDLLTDYSAECKEWTLFAGEHWRAGRFERAEQVLLSG----I 76

Query: 72  DEYYADVRYERIAILNALGVY-YTYLGKIETKQ----REKEEHFILATQYYNKA------ 120
             + +    + +A+ N   +  + +L    T       + + H+  AT + N+A      
Sbjct: 77  KFFGSGGHVDSVALSNLHAMLAHLHLAWARTAPTVVLSQAKSHYSEATAHLNRADEAMRS 136

Query: 121 --SRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRY 178
             +  D    S  +GK  L  A+G+   A+   + +L+   DN+PAL  QA ++F R   
Sbjct: 137 SGANPDEEPVSLSMGKIILYSARGQQGTAAPLVERLLQRQPDNLPALAAQARLQFARRET 196

Query: 179 SDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA 238
             +L  Y++ L ++P+     R+GIGLC + LG   +A  A+ RAL+LDP +  A + LA
Sbjct: 197 GAALVTYQKILALNPNAQPDPRIGIGLCAWTLGDRVRATMAWDRALELDPSSWAARLMLA 256

Query: 239 VMDL----QANEAAGIR-----KGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQ 289
           + +L    + N     R     +G+   Q AF++      A   L+      G   L  +
Sbjct: 257 LANLNMAREPNHPMDKRLTYESEGVSHAQNAFKLNNKSTAASLVLSGVAALGGHIELASK 316

Query: 290 LTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLG 349
           L E A+   ++      S     R     GD   AG+ Y+A+ K  ++ +  +     L 
Sbjct: 317 LAERAIQYADNKRHVVMSNSERGRLGFVAGDVADAGV-YIAAAKGADQQNVNMMAELTLA 375

Query: 350 QVQLKLGDFRSALTNFEKVLEIY----PDNCETLKALGHIYVQLG--------------- 390
           Q+ +K G+ R AL   E+  +      P     L A    Y  LG               
Sbjct: 376 QIAIKNGNLREALNFVEQTAKRLNGKPPLEFTVLHASLLAYPHLGMPADELARNRVTARD 435

Query: 391 QIEKAQELLRKA------AKID--PRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKA 442
            +   Q+L+  A      AK+     D+  F++L +L        A+++++TA ++    
Sbjct: 436 MLSGIQDLVSNADSDEDWAKLRGIAADSDTFVELAKLWQEESVDKAINSYQTAISIKADL 495

Query: 443 GEE------------VPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSK-TK 489
            EE              I++  N+  ++  +G  E+A   F+DAL          SK TK
Sbjct: 496 EEEDTATQETKPVDYSEIKLKANLAALYALQGHTENAEAMFQDAL----------SKLTK 545

Query: 490 TYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYR 549
               +A A                          K  + ++L R  EQ  D V A   YR
Sbjct: 546 ESGPEADAM-------------------------KTVLAYDLGRAFEQGGDIVNAQKWYR 580

Query: 550 LILFKYQDYVDAYLRLAAIA-------KARNNLQLSIELVNEALKVNGKYPNALSMLGDL 602
            +L ++ +++++ +RLA +A       +A N L+  +   +  L +   Y N L  +G  
Sbjct: 581 DVLHQHPEHMESKVRLAHLATIAGRNVEAHNYLKECLRADDSNLTLRSVYTNFLIGIGSF 640

Query: 603 ELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLE--KA 660
                   K    F + +   D  D Y   +LG W ++   R  K    +     +  ++
Sbjct: 641 --------KEALNFTSHTLRLDKTDPYTFTALG-WLHYTLGREAKSQQDVAERPKQYLRS 691

Query: 661 KELYTRVIVQHTSNLYAANGAGVVLAE--------KGQFDVSKDLFTQVQEAAS-----G 707
            E Y R +    +N  AA G  + LAE        +     ++D+ T+ + A +     G
Sbjct: 692 AEAYERALSLDPTNAVAAQGLAIALAENTLVPKNLQPAPGSAEDVKTRTRLAGNALSVLG 751

Query: 708 SVFVQMPD--VWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQ 765
            +   +P+  V +N+ H YF +G    A++ Y + L   Y   +  +LLYL R  +    
Sbjct: 752 RIKDSLPEGPVSVNIGHCYFLRGEEQRAIEAYGSALNS-YGGHNVSVLLYLCRAWFTYAT 810

Query: 766 WQDCKKSL-------LRAIHLAPSNYTLRFDAGVAMQKFSAST----LQKTRRTADEVRS 814
            +    ++        +A+H+ PS+  + ++ G+ +Q  +A+T    L+ ++RT +E+  
Sbjct: 811 KESNVSAMSQALSYATQALHIQPSDRAILYNIGLILQ--NAATIMLDLEPSKRTLEELTH 868

Query: 815 TVAELENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNR 874
           T+   E A  +F  L+      L  +D    +   ++   +     + R  AE ++Q+  
Sbjct: 869 TLKRAEEAASIFRSLADDKAGPL-AYDRNMADQRAKFLDSI-----VSRGQAEVKKQEAY 922

Query: 875 QRQEAARQAALAEEARR-KAEEQKK 898
           + + AAR     EEARR +AEEQ +
Sbjct: 923 EAEFAAR----VEEARRVRAEEQAR 943


>gi|259149343|emb|CAY86147.1| Ctr9p [Saccharomyces cerevisiae EC1118]
 gi|323346661|gb|EGA80945.1| Ctr9p [Saccharomyces cerevisiae Lalvin QA23]
          Length = 1077

 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 245/1027 (23%), Positives = 437/1027 (42%), Gaps = 200/1027 (19%)

Query: 6   IPVQNSEEEVRVALD-QLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQILE 64
           IP++ SEE V + L+  LP D +D+  +L  E +  + WL IA  Y   GK  +  +++E
Sbjct: 21  IPLKASEELVGIDLETDLPDDPTDLKTLLVEENSEKEHWLTIALAYCNHGKTNEGIKLIE 80

Query: 65  EGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRID 124
                 +D +      ER ++   L   +  L K ++   E +EH +   +  N    I 
Sbjct: 81  MA----LDVFQNS---ERASLHTFLTWAHLNLAKGQSLSVETKEHELTQAEL-NLKDAIG 132

Query: 125 MHEPSTWVGKG----QLLLAKGEVEQA---SSAFKIVLEAD--------RDNVPALLGQA 169
             +P TW+G      +L   +G  ++A   S  F   + A+        + N   LL +A
Sbjct: 133 F-DP-TWIGNMLATVELYYQRGHYDKALETSDLFVKSIHAEDHRSGRQSKPNCLFLLLRA 190

Query: 170 CVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPE 229
            + + +  Y  SL+ ++  L ++P      R+GIGLC ++L     A +++QRALQL+P+
Sbjct: 191 KLLYQKKNYMASLKIFQELLVINPVLQPDPRIGIGLCFWQLKDSKMAIKSWQRALQLNPK 250

Query: 230 NVEALVALAVMDLQ------ANEAA---GIRKGMEKMQRAFEIYPYCAMALNYLANHFFF 280
           N  A + + + + +       N+        K +  +   F    +  + L  L  +++F
Sbjct: 251 NTSASILVLLGEFRESFTNSTNDKTFKEAFTKALSDLNNIFSENQHNPVLLTLLQTYYYF 310

Query: 281 TGQHFLVEQLTETALAVTNHGPTK----------SHSYYNLARSYHSKGDYEKAGLYYMA 330
            G +       +T L + +H   K          S S +   R++++ GDY K+ + +  
Sbjct: 311 KGDY-------QTVLDIYHHRILKMSPMIAKIVLSESSFWCGRAHYALGDYRKSFIMFQE 363

Query: 331 SVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLG 390
           S+K   K  + +    GLGQ Q+K      ++  FE    +Y  N E+L+ L +I   LG
Sbjct: 364 SLK---KNEDNLLAKLGLGQTQIKNNLLEESIITFEN---LYKTN-ESLQELNYI---LG 413

Query: 391 QIEKAQELLRKAAKIDPRDAQA-----------------FIDLGELLIS------SDTGA 427
            +   +    K AK      Q+                 F    +L+IS      S    
Sbjct: 414 MLYAGKAFDAKTAKNTSAKEQSNLNEKALKYLERYLKLTFATKNQLVISRAYLVISQLYE 473

Query: 428 ALDAFKTARTLLKKAGE-------EVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIW 480
             + +KT+   L KA E       E+P+EVLNN+   HF  G+F  A   FK A      
Sbjct: 474 LQNQYKTSLDYLSKALEEMEFIKKEIPLEVLNNLACYHFINGDFIKADDLFKQA------ 527

Query: 481 LTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHD 540
                   K  V D   S+                         +T+ +N+AR  E+ +D
Sbjct: 528 --------KAKVSDKDESV------------------------NITLEYNIARTNEK-ND 554

Query: 541 TVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQ---LSIELVNEALKVNGKYPNALS 597
              +  +Y  +   +  Y+ A +R   +  A++ ++   +S E+ N+ L +N        
Sbjct: 555 CEKSESIYSQVTSLHPAYIAARIRNLYLKFAQSKIEDSDMSTEM-NKLLDLNK------- 606

Query: 598 MLGDLE--------LKNDDWVKAKETFRAASDAT----DGKDSYATLSLGNWNYFAAL-- 643
              DLE        LKN    K  E     +  T    +  D+YA +SL N     A   
Sbjct: 607 --SDLEIRSFYAWYLKNSKERKNNEKSTTHNKETLVKYNSHDAYALISLANLYVTIARDG 664

Query: 644 ---RNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQ 700
              RN K   K + ++L KA +LY +++     N++AA G  ++ AE  +   + ++  +
Sbjct: 665 KKSRNPKEQEKSKHSYL-KAIQLYQKILQVDPFNIFAAQGLAIIFAESKRLGPALEILRK 723

Query: 701 VQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKF-YYNTDAQILLYLART 759
           V+++          DV +NLAH Y     +  A++ Y+  L+KF    T   IL  L R 
Sbjct: 724 VRDSLDNE------DVQLNLAHCYLEMREYGKAIENYELVLKKFDNEKTRPHILNLLGRA 777

Query: 760 HY-------EAEQWQDCKKSLLRAIHL-----APSNYTLRFDAGVAMQKFS-ASTLQKTR 806
            Y           +Q   ++   A+ L     + S +       +A+  F  A TL+++ 
Sbjct: 778 WYARAIKERSVNFYQKALENAKTALDLFVKESSKSKFIHSVKFNIALLHFQIAETLRRSN 837

Query: 807 ---RTADEVRSTVAELENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHR 863
              RT  +++ ++  L+  + +F  L+     ++    ++++   ++  +  + +A + R
Sbjct: 838 PKFRTVQQIKDSLEGLKEGLELFRELNDLKEFNM--IPKEELEQRIQLGETTMKSA-LER 894

Query: 864 EAAEREE---QQNRQRQEAAR---QAALAEEARRKAEEQKKYL-LEK-----RKLEDEQK 911
              E+EE   +Q+ +  EA +   +  L E+ R K EE+ + L LEK     RKL+DE +
Sbjct: 895 SLNEQEEFEKEQSAKIDEARKILEENELKEQERMKQEEEARRLKLEKQAEEYRKLQDEAQ 954

Query: 912 RLRQQEE 918
           +L Q+ E
Sbjct: 955 KLIQERE 961


>gi|151945491|gb|EDN63732.1| cln three (cln3) requiring protein [Saccharomyces cerevisiae
           YJM789]
 gi|190407208|gb|EDV10475.1| CTR9 protein [Saccharomyces cerevisiae RM11-1a]
 gi|207341482|gb|EDZ69529.1| YOL145Cp-like protein [Saccharomyces cerevisiae AWRI1631]
 gi|256270134|gb|EEU05364.1| Ctr9p [Saccharomyces cerevisiae JAY291]
          Length = 1077

 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 240/1020 (23%), Positives = 431/1020 (42%), Gaps = 186/1020 (18%)

Query: 6   IPVQNSEEEVRVALD-QLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQILE 64
           IP++ SEE V + L+  LP D +D+  +L  E +  + WL IA  Y   GK  +  +++E
Sbjct: 21  IPLKASEELVGIDLETDLPDDPTDLKTLLVEENSEKEHWLTIALAYCNHGKTNEGIKLIE 80

Query: 65  EGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRID 124
                 +D +      ER ++   L   +  L K ++   E +EH +   +  N    I 
Sbjct: 81  MA----LDVFQNS---ERASLHTFLTWAHLNLAKGQSLSVETKEHELTQAEL-NLKDAIG 132

Query: 125 MHEPSTWVGKG----QLLLAKGEVEQA---SSAFKIVLEAD--------RDNVPALLGQA 169
             +P TW+G      +L   +G  ++A   S  F   + A+        + N   LL +A
Sbjct: 133 F-DP-TWIGNMLATVELYYQRGHYDKALETSDLFVKSIHAEDHRSGRQSKPNCLFLLLRA 190

Query: 170 CVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPE 229
            + + +  Y  SL+ ++  L ++P      R+GIGLC ++L     A +++QRALQL+P+
Sbjct: 191 KLLYQKKNYMASLKIFQELLVINPVLQPDPRIGIGLCFWQLKDSKMAIKSWQRALQLNPK 250

Query: 230 NVEALVALAVMDLQ------ANEAA---GIRKGMEKMQRAFEIYPYCAMALNYLANHFFF 280
           N  A + + + + +       N+        K +  +   F    +  + L  L  +++F
Sbjct: 251 NTSASILVLLGEFRESFTNSTNDKTFKEAFTKALSDLNNIFSENQHNPVLLTLLQTYYYF 310

Query: 281 TGQHFLVEQLTETALAVTNHGPTK----------SHSYYNLARSYHSKGDYEKAGLYYMA 330
            G +       +T L + +H   K          S S +   R++++ GDY K+ + +  
Sbjct: 311 KGDY-------QTVLDIYHHRILKMSPMIAKIVLSESSFWCGRAHYALGDYRKSFIMFQE 363

Query: 331 SVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYV--- 387
           S+K   K  + +    GLGQ Q+K      ++  FE + +      E    LG +Y    
Sbjct: 364 SLK---KNEDNLLAKLGLGQTQIKNNLLEESIITFENLYKTNESLQELNYILGMLYAGKA 420

Query: 388 -------------QLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKT 434
                        Q    EKA + L +  K+        +     L+ S      + +KT
Sbjct: 421 FDAKTAKNTSAKEQSNLNEKALKYLERYLKLTLATKNQLVISRAYLVISQLYELQNQYKT 480

Query: 435 ARTLLKKAGE-------EVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSK 487
           +   L KA E       E+P+EVLNN+   HF  G+F  A   FK A             
Sbjct: 481 SLDYLSKALEEMEFIKKEIPLEVLNNLACYHFINGDFIKADDLFKQA------------- 527

Query: 488 TKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVL 547
            K  V D   S+                         +T+ +N+AR  E+ +D   +  +
Sbjct: 528 -KAKVSDKDESV------------------------NITLEYNIARTNEK-NDCEKSESI 561

Query: 548 YRLILFKYQDYVDAYLRLAAIAKARNNLQ---LSIELVNEALKVNGKYPNALSMLGDLE- 603
           Y  +   +  Y+ A +R   +  A++ ++   +S E+ N+ L +N           DLE 
Sbjct: 562 YSQVTSLHPAYIAARIRNLYLKFAQSKIEDSDMSTEM-NKLLDLNK---------SDLEI 611

Query: 604 -------LKNDDWVKAKETFRAASDAT----DGKDSYATLSLGNWNYFAAL-----RNEK 647
                  LKN    K  E     +  T    +  D+YA +SL N     A      RN K
Sbjct: 612 RSFYAWYLKNSKERKNNEKSTTHNKETLVKYNSHDAYALISLANLYVTIARDGKKSRNPK 671

Query: 648 RAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASG 707
              K + ++L KA +LY +++     N++AA G  ++ AE  +   + ++  +V+++   
Sbjct: 672 EQEKSKHSYL-KAIQLYQKILQVDPFNIFAAQGLAIIFAESKRLGPALEILRKVRDSLDN 730

Query: 708 SVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKF-YYNTDAQILLYLARTHY----- 761
                  DV +NLAH Y     +  A++ Y+  L+KF    T   IL  L R  Y     
Sbjct: 731 E------DVQLNLAHCYLEMREYGKAIENYELVLKKFDNEKTRPHILNLLGRAWYARAIK 784

Query: 762 --EAEQWQDCKKSLLRAIHL-----APSNYTLRFDAGVAMQKFS-ASTLQKTR---RTAD 810
                 +Q   ++   A+ L     + S +       +A+  F  A TL+++    RT  
Sbjct: 785 ERSVNFYQKALENAKTALDLFVKESSKSKFIHSVKFNIALLHFQIAETLRRSNPKFRTVQ 844

Query: 811 EVRSTVAELENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREE 870
           +++ ++  L+  + +F  L+     ++    ++++   ++  +  + +A + R   E+EE
Sbjct: 845 QIKDSLEGLKEGLELFRELNDLKEFNM--IPKEELEQRIQLGETTMKSA-LERSLNEQEE 901

Query: 871 ---QQNRQRQEAAR---QAALAEEARRKAEEQKKYL-LEK-----RKLEDEQKRLRQQEE 918
              +Q+ +  EA +   +  L E+ R K EE+ + L LEK     RKL+DE ++L Q+ E
Sbjct: 902 FEKEQSAKIDEARKILEENELKEQERMKQEEEARRLKLEKQAEEYRKLQDEAQKLIQERE 961


>gi|323352275|gb|EGA84810.1| Ctr9p [Saccharomyces cerevisiae VL3]
          Length = 1040

 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 240/1020 (23%), Positives = 431/1020 (42%), Gaps = 186/1020 (18%)

Query: 6   IPVQNSEEEVRVALD-QLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQILE 64
           IP++ SEE V + L+  LP D +D+  +L  E +  + WL IA  Y   GK  +  +++E
Sbjct: 21  IPLKASEELVGIDLETDLPDDPTDLKTLLVEENSEKEHWLTIALAYCNHGKTNEGIKLIE 80

Query: 65  EGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRID 124
                 +D +      ER ++   L   +  L K ++   E +EH +   +  N    I 
Sbjct: 81  MA----LDVFQNS---ERASLHTFLTWAHLNLAKGQSLSVETKEHELTQAEL-NLKDAIG 132

Query: 125 MHEPSTWVGKG----QLLLAKGEVEQA---SSAFKIVLEAD--------RDNVPALLGQA 169
             +P TW+G      +L   +G  ++A   S  F   + A+        + N   LL +A
Sbjct: 133 F-DP-TWIGNMLATVELYYQRGHYDKALETSDLFVKSIHAEDHRSGRQSKPNCLFLLLRA 190

Query: 170 CVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPE 229
            + + +  Y  SL+ ++  L ++P      R+GIGLC ++L     A +++QRALQL+P+
Sbjct: 191 KLLYQKKNYMASLKIFQELLVINPVLQPDPRIGIGLCFWQLKDSKMAIKSWQRALQLNPK 250

Query: 230 NVEALVALAVMDLQ------ANEAA---GIRKGMEKMQRAFEIYPYCAMALNYLANHFFF 280
           N  A + + + + +       N+        K +  +   F    +  + L  L  +++F
Sbjct: 251 NTSASILVLLGEFRESFTNSTNDKTFKEAFTKALSDLNNIFSENQHNPVLLTLLQTYYYF 310

Query: 281 TGQHFLVEQLTETALAVTNHGPTK----------SHSYYNLARSYHSKGDYEKAGLYYMA 330
            G +       +T L + +H   K          S S +   R++++ GDY K+ + +  
Sbjct: 311 KGDY-------QTVLDIYHHRILKMSPMIAKIVLSESSFWCGRAHYALGDYRKSFIMFQE 363

Query: 331 SVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYV--- 387
           S+K   K  + +    GLGQ Q+K      ++  FE + +      E    LG +Y    
Sbjct: 364 SLK---KNEDNLLAKLGLGQTQIKNNLLEESIITFENLYKTNESLQELNYILGMLYAGKA 420

Query: 388 -------------QLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKT 434
                        Q    EKA + L +  K+        +     L+ S      + +KT
Sbjct: 421 FDAKTAKNTSAKEQSNLNEKALKYLERYLKLTLATKNQLVISRAYLVISQLYELQNQYKT 480

Query: 435 ARTLLKKAGE-------EVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSK 487
           +   L KA E       E+P+EVLNN+   HF  G+F  A   FK A             
Sbjct: 481 SLDYLSKALEEMEFIKKEIPLEVLNNLACYHFINGDFIKADDLFKQA------------- 527

Query: 488 TKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVL 547
            K  V D   S+                         +T+ +N+AR  E+ +D   +  +
Sbjct: 528 -KAKVSDKDESV------------------------NITLEYNIARTNEK-NDCEKSESI 561

Query: 548 YRLILFKYQDYVDAYLRLAAIAKARNNLQ---LSIELVNEALKVNGKYPNALSMLGDLE- 603
           Y  +   +  Y+ A +R   +  A++ ++   +S E+ N+ L +N           DLE 
Sbjct: 562 YSQVTSLHPAYIAARIRNLYLKFAQSKIEDSDMSTEM-NKLLDLNK---------SDLEI 611

Query: 604 -------LKNDDWVKAKETFRAASDAT----DGKDSYATLSLGNWNYFAAL-----RNEK 647
                  LKN    K  E     +  T    +  D+YA +SL N     A      RN K
Sbjct: 612 RSFYAWYLKNSKERKNNEKSTTHNKETLVKYNSHDAYALISLANLYVTIARDGKKSRNPK 671

Query: 648 RAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASG 707
              K + ++L KA +LY +++     N++AA G  ++ AE  +   + ++  +V+++   
Sbjct: 672 EQEKSKHSYL-KAIQLYQKILQVDPFNIFAAQGLAIIFAESKRLGPALEILRKVRDSLDN 730

Query: 708 SVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKF-YYNTDAQILLYLARTHY----- 761
                  DV +NLAH Y     +  A++ Y+  L+KF    T   IL  L R  Y     
Sbjct: 731 E------DVQLNLAHCYLEMREYGKAIENYELVLKKFDNEKTRPHILNLLGRAWYARAIK 784

Query: 762 --EAEQWQDCKKSLLRAIHL-----APSNYTLRFDAGVAMQKFS-ASTLQKTR---RTAD 810
                 +Q   ++   A+ L     + S +       +A+  F  A TL+++    RT  
Sbjct: 785 ERSVNFYQKALENAKTALDLFVKESSKSKFIHSVKFNIALLHFQIAETLRRSNPKFRTVQ 844

Query: 811 EVRSTVAELENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREE 870
           +++ ++  L+  + +F  L+     ++    ++++   ++  +  + +A + R   E+EE
Sbjct: 845 QIKDSLEGLKEGLELFRELNDLKEFNM--IPKEELEQRIQLGETTMKSA-LERSLNEQEE 901

Query: 871 ---QQNRQRQEAAR---QAALAEEARRKAEEQKKYL-LEK-----RKLEDEQKRLRQQEE 918
              +Q+ +  EA +   +  L E+ R K EE+ + L LEK     RKL+DE ++L Q+ E
Sbjct: 902 FEKEQSAKIDEARKILEENELKEQERMKQEEEARRLKLEKQAEEYRKLQDEAQKLIQERE 961


>gi|330443717|ref|NP_014496.2| Ctr9p [Saccharomyces cerevisiae S288c]
 gi|347595802|sp|P89105.3|CTR9_YEAST RecName: Full=RNA polymerase-associated protein CTR9; AltName:
           Full=Centromere-binding factor 1-dependent protein 1;
           AltName: Full=Cln three-requiring protein 9
 gi|329138967|tpg|DAA10640.2| TPA: Ctr9p [Saccharomyces cerevisiae S288c]
          Length = 1077

 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 239/1012 (23%), Positives = 429/1012 (42%), Gaps = 170/1012 (16%)

Query: 6   IPVQNSEEEVRVALD-QLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQILE 64
           IP++ SEE V + L+  LP D +D+  +L  E +  + WL IA  Y   GK  +  +++E
Sbjct: 21  IPLKASEELVGIDLETDLPDDPTDLKTLLVEENSEKEHWLTIALAYCNHGKTNEGIKLIE 80

Query: 65  EGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRID 124
                 +D +      ER ++   L   +  L K ++   E +EH +   +  N    I 
Sbjct: 81  MA----LDVFQNS---ERASLHTFLTWAHLNLAKGQSLSVETKEHELTQAEL-NLKDAIG 132

Query: 125 MHEPSTWVGKG----QLLLAKGEVEQA---SSAFKIVLEAD--------RDNVPALLGQA 169
             +P TW+G      +L   +G  ++A   S  F   + A+        + N   LL +A
Sbjct: 133 F-DP-TWIGNMLATVELYYQRGHYDKALETSDLFVKSIHAEDHRSGRQSKPNCLFLLLRA 190

Query: 170 CVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPE 229
            + + +  Y  SL+ ++  L ++P      R+GIGLC ++L     A +++QRALQL+P+
Sbjct: 191 KLLYQKKNYMASLKIFQELLVINPVLQPDPRIGIGLCFWQLKDSKMAIKSWQRALQLNPK 250

Query: 230 NVEALVALAVMDLQ------ANEAA---GIRKGMEKMQRAFEIYPYCAMALNYLANHFFF 280
           N  A + + + + +       N+        K +  +   F    +  + L  L  +++F
Sbjct: 251 NTSASILVLLGEFRESFTNSTNDKTFKEAFTKALSDLNNIFSENQHNPVLLTLLQTYYYF 310

Query: 281 TGQHFLVEQLTETALAVTNHGPTK----------SHSYYNLARSYHSKGDYEKAGLYYMA 330
            G +       +T L + +H   K          S S +   R++++ GDY K+ + +  
Sbjct: 311 KGDY-------QTVLDIYHHRILKMSPMIAKIVLSESSFWCGRAHYALGDYRKSFIMFQE 363

Query: 331 SVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYV--- 387
           S+K   K  + +    GLGQ Q+K      ++  FE + +      E    LG +Y    
Sbjct: 364 SLK---KNEDNLLAKLGLGQTQIKNNLLEESIITFENLYKTNESLQELNYILGMLYAGKA 420

Query: 388 -------------QLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKT 434
                        Q    EKA + L +  K+        +     L+ S      + +KT
Sbjct: 421 FDAKTAKNTSAKEQSNLNEKALKYLERYLKLTLATKNQLVISRAYLVISQLYELQNQYKT 480

Query: 435 ARTLLKKAGE-------EVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSK 487
           +   L KA E       E+P+EVLNN+   HF  G+F  A   FK A             
Sbjct: 481 SLDYLSKALEEMEFIKKEIPLEVLNNLACYHFINGDFIKADDLFKQA------------- 527

Query: 488 TKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVL 547
            K  V D   S+                         +T+ +N+AR  E+ +D   +  +
Sbjct: 528 -KAKVSDKDESV------------------------NITLEYNIARTNEK-NDCEKSESI 561

Query: 548 YRLILFKYQDYVDAYLRLAAIAKARNNLQ---LSIELVNEALKVNGKYPNALSMLGDLEL 604
           Y  +   +  Y+ A +R   +  A++ ++   +S E+ N+ L +N       S  G   L
Sbjct: 562 YSQVTSLHPAYIAARIRNLYLKFAQSKIEDSDMSTEM-NKLLDLNKSDLEIRSFYG-WYL 619

Query: 605 KNDDWVKAKETFRAASDAT----DGKDSYATLSLGNWNYFAAL-----RNEKRAPKLEAT 655
           KN    K  E     +  T    +  D+YA +SL N     A      RN K   K + +
Sbjct: 620 KNSKERKNNEKSTTHNKETLVKYNSHDAYALISLANLYVTIARDGKKSRNPKEQEKSKHS 679

Query: 656 HLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPD 715
           +L KA +LY +V+     N++AA G  ++ AE  +   + ++  +V+++          D
Sbjct: 680 YL-KAIQLYQKVLQVDPFNIFAAQGLAIIFAESKRLGPALEILRKVRDSLDNE------D 732

Query: 716 VWINLAHVYFAQGNFALAMKMYQNCLRKF-YYNTDAQILLYLARTHY-------EAEQWQ 767
           V +NLAH Y     +  A++ Y+  L+KF    T   IL  L R  Y           +Q
Sbjct: 733 VQLNLAHCYLEMREYGKAIENYELVLKKFDNEKTRPHILNLLGRAWYARAIKERSVNFYQ 792

Query: 768 DCKKSLLRAIHL-----APSNYTLRFDAGVAMQKFS-ASTLQKTR---RTADEVRSTVAE 818
              ++   A+ L     + S +       +A+  F  A TL+++    RT  +++ ++  
Sbjct: 793 KALENAKTALDLFVKESSKSKFIHSVKFNIALLHFQIAETLRRSNPKFRTVQQIKDSLEG 852

Query: 819 LENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREE---QQNRQ 875
           L+  + +F  L+     ++    ++++   ++  +  + +A + R   E+EE   +Q+ +
Sbjct: 853 LKEGLELFRELNDLKEFNM--IPKEELEQRIQLGETTMKSA-LERSLNEQEEFEKEQSAK 909

Query: 876 RQEAAR---QAALAEEARRKAEEQKKYL-LEK-----RKLEDEQKRLRQQEE 918
             EA +   +  L E+   K EE+ + L LEK     RKL+DE ++L Q+ E
Sbjct: 910 IDEARKILEENELKEQGWMKQEEEARRLKLEKQAEEYRKLQDEAQKLIQERE 961


>gi|156841393|ref|XP_001644070.1| hypothetical protein Kpol_1014p32 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156114704|gb|EDO16212.1| hypothetical protein Kpol_1014p32 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 1084

 Score =  149 bits (377), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 221/915 (24%), Positives = 383/915 (41%), Gaps = 171/915 (18%)

Query: 6   IPVQNSEEEVRVALD-QLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQILE 64
           IP++ SEE V + L+  LP D +D+  +L  E +  + WL IA  Y  QGK+++  +++E
Sbjct: 21  IPLKASEEVVSIDLETDLPEDPADLRTLLVEESSDKEHWLTIAVAYCNQGKIDEGIKLIE 80

Query: 65  EGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRID 124
                   E + +V    +       + + +L K +     KEE      Q  N+A   +
Sbjct: 81  MAL-----ETFQNVEKAPLHTF----LTWAHLKKAKETSVNKEEK----NQELNQA---E 124

Query: 125 MH-------EPSTWVGKG----QLLLAKGEVEQASSAFKIVLEA-----------DRDNV 162
           MH       +P TWVG       L   + + ++A     I ++             + N 
Sbjct: 125 MHLKDAIGFDP-TWVGNMLATIDLYYERNQYDKALETTDIFMKGIATEDHRHGRTTKPNC 183

Query: 163 PALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQR 222
             +L +A + + +  Y  SL  ++  L ++P      R+GIGLC ++L     A ++++R
Sbjct: 184 FFILIRAKLLYQKNNYLASLRLFQELLVLNPVLQPDPRIGIGLCFWQLKDYKMAIKSWKR 243

Query: 223 ALQLDPEN--VEALVALAVMDLQANEAAG-------IRKGMEKMQRAFEIYPYCAMALNY 273
           AL+L+P++   E LV L        E++          + ++ +   +       + L  
Sbjct: 244 ALELNPKDKSAEILVLLGDFHKSLTESSNDNQFSDYYTEALKNLNNLYSNNKENPVLLTL 303

Query: 274 LANHFFFTGQHFLVEQLTE---TALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 330
           L ++F+F G +  V  + E   + +A        S S +  AR+++S  DY KA   +  
Sbjct: 304 LQSYFYFKGDYKAVLDIHENKISKVASITTNSVLSDSAFWCARAHYSLHDYRKAFTMFQE 363

Query: 331 SVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIY---- 386
           S++   K  + +   +GLGQ Q K      ++  FE + + +    E    LG +Y    
Sbjct: 364 SLR---KNEDNLLAKFGLGQTQFKTNLLEESILTFENLYKSFEGIQELNYILGLLYSGKV 420

Query: 387 VQLGQ----------IEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTAR 436
           + L            I K+ + L K  K+        +     LI S+     + +K + 
Sbjct: 421 LNLSNILPHSESQKLIAKSIQYLEKYVKLTTTKKNQLVIPKAYLILSELYEIQNNYKQSL 480

Query: 437 TLLKKAGE--------EVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKT 488
             L KA E        E+P E+LNNIG  +F  G+   A + F+ A            + 
Sbjct: 481 EYLTKAMEDAKAINKDEIPFEILNNIGCFYFITGDSNKAIEYFEFA----------KERL 530

Query: 489 KTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLY 548
           K Y ID   S                         +VT+ +N+AR  E   D   A+ +Y
Sbjct: 531 KVYDIDTKPS-------------------------EVTLSYNIARTTETT-DISKANSMY 564

Query: 549 RLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNAL-SMLGDLE---- 603
             IL ++ DY+   +R + IAK        I    + + + G+  N +     DLE    
Sbjct: 565 EDILGRHPDYIHLKVR-SLIAK------FMINGGKDGVSIEGEVENLMKDNSSDLEVRSF 617

Query: 604 ----LKND----------DWVKAKETFRAASDAT----DGKDSYATLSLGN-WNYFAALR 644
               LKND           +VK +E     +  T    +  D +A  S+GN +NY A  +
Sbjct: 618 YSWFLKNDMKDTANFDEKKYVKNQEIETNNNKETLVKFNSHDVFALNSMGNFYNYLA--K 675

Query: 645 NEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEA 704
             KR P+    +  K+ +L+ + +     N++AA G  ++ AE  +   S ++  +++++
Sbjct: 676 ENKRNPEKAKQYYLKSIQLFQKALQVDPLNVFAAQGLAIIFAECKRLGPSLEILRKIRDS 735

Query: 705 ASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTD-AQILLYLARTHY-- 761
                 +   DV +NLA+       +A A++ Y+  L++F  + + A+I   L RT Y  
Sbjct: 736 ------LDTEDVHLNLANCLLEMHEYAKAIEEYEFILKRFLDSKNSAKIYNLLGRTWYAR 789

Query: 762 -EAEQWQDC-KKSLLRA-----IHLAPSNYTLR------FDAGVAMQKFSASTLQKTRRT 808
              E+  DC KKSL  A     +     N T R      F   VA+  F    + +T R 
Sbjct: 790 GNKEKSHDCYKKSLKNAETALKMETEKENGTARGSKIMSFKYNVALLHFQ---IAETLRR 846

Query: 809 ADEVRSTVAELENAV 823
           AD    TV ++ NA+
Sbjct: 847 ADVRDRTVEDVTNAL 861


>gi|365763122|gb|EHN04652.1| Ctr9p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
          Length = 1077

 Score =  149 bits (376), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 240/1020 (23%), Positives = 431/1020 (42%), Gaps = 186/1020 (18%)

Query: 6   IPVQNSEEEVRVALD-QLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQILE 64
           IP++ SEE V + L+  LP D +D+  +L  E +  + WL IA  Y   GK  +  +++E
Sbjct: 21  IPLKASEELVGIDLETDLPDDPTDLKTLLVEENSEKEHWLTIALAYCNHGKTNEGIKLIE 80

Query: 65  EGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRID 124
                 +D +      ER ++   L   +  L K ++   E +EH +   +  N    I 
Sbjct: 81  MA----LDVFQNS---ERASLHTFLTWAHLNLAKGQSLSVETKEHELTQAEL-NLKDAIG 132

Query: 125 MHEPSTWVGKG----QLLLAKGEVEQA---SSAFKIVLEAD--------RDNVPALLGQA 169
             +P TW+G      +L   +G  ++A   S  F   + A+        + N   LL +A
Sbjct: 133 F-DP-TWIGNMLATVELYYQRGHYDKALETSDLFVKSIHAEDHRSGRQSKPNCLFLLLRA 190

Query: 170 CVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPE 229
            + + +  Y  SL+ ++  L ++P      R+GIGLC ++L     A +++QRALQL+P+
Sbjct: 191 KLLYQKKNYMASLKIFQELLVINPVLQPDPRIGIGLCFWQLKDSKMAIKSWQRALQLNPK 250

Query: 230 NVEALVALAVMDLQ------ANEAA---GIRKGMEKMQRAFEIYPYCAMALNYLANHFFF 280
           N  A + + + + +       N+        K +  +   F    +  + L  L  +++F
Sbjct: 251 NTSASILVLLGEFRESFTNSTNDKTFKEAFTKALSDLNNIFSENQHNPVLLTLLQTYYYF 310

Query: 281 TGQHFLVEQLTETALAVTNHGPTK----------SHSYYNLARSYHSKGDYEKAGLYYMA 330
            G +       +T L + +H   K          S S +   R++++ GDY K+ + +  
Sbjct: 311 KGDY-------QTVLDIYHHRILKMSPMIAKIVLSESSFWCGRAHYALGDYRKSFIMFQE 363

Query: 331 SVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYV--- 387
           S+K   K  + +    GLGQ Q+K      ++  FE + +      E    LG +Y    
Sbjct: 364 SLK---KNEDNLLAKLGLGQTQIKNNLLEESIITFENLYKTNESLQELNYILGMLYAGKA 420

Query: 388 -------------QLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKT 434
                        Q    EKA + L +  K+        +     L+ S      + +KT
Sbjct: 421 FDAKTAKNTSAKEQSNLNEKALKYLERYLKLTLATKNQLVISRAYLVISQLYELQNQYKT 480

Query: 435 ARTLLKKAGE-------EVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSK 487
           +   L KA E       E+P+EVLNN+   HF  G+F  A   FK A            K
Sbjct: 481 SLDYLSKALEEMEFIKKEIPLEVLNNLACYHFINGDFIKADDLFKQA------------K 528

Query: 488 TKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVL 547
            K    D S +                          +T+ +N+AR  E+ +D   +  +
Sbjct: 529 AKVSGKDESVN--------------------------ITLEYNIARTNEK-NDCEKSESI 561

Query: 548 YRLILFKYQDYVDAYLRLAAIAKARNNLQ---LSIELVNEALKVNGKYPNALSMLGDLE- 603
           Y  +   +  Y+ A +R   +  A++ ++   +S E+ N+ L +N           DLE 
Sbjct: 562 YSQVTSLHPAYIAARIRNLYLKFAQSKIEDSDMSTEM-NKLLDLNK---------SDLEI 611

Query: 604 -------LKNDDWVKAKETFRAASDAT----DGKDSYATLSLGNWNYFAAL-----RNEK 647
                  LKN    K  E     +  T    +  D+YA +SL N     A      RN K
Sbjct: 612 RSFYAWYLKNSKERKNNEKSTTHNKETLVKYNSHDAYALISLANLYVTIARDGKKSRNPK 671

Query: 648 RAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASG 707
              K + ++L KA +LY +++     N++AA G  ++ AE  +   + ++  +V+++   
Sbjct: 672 EQEKSKHSYL-KAIQLYQKILQVDPFNIFAAQGLAIIFAESKRLGPALEILRKVRDSLDN 730

Query: 708 SVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKF-YYNTDAQILLYLARTHY----- 761
                  DV +NLAH Y     +  A++ Y+  L+KF    T   IL  L R  Y     
Sbjct: 731 E------DVQLNLAHCYLEMREYGKAIENYELVLKKFDNEKTRPHILNLLGRAWYARAIK 784

Query: 762 --EAEQWQDCKKSLLRAIHL-----APSNYTLRFDAGVAMQKFS-ASTLQKTR---RTAD 810
                 +Q   ++   A+ L     + S +       +A+  F  A TL+++    RT  
Sbjct: 785 ERSVNFYQKALENAKTALDLFVKESSKSKFIHSVKFNIALLHFQIAETLRRSNPKFRTVQ 844

Query: 811 EVRSTVAELENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREE 870
           +++ ++  L+  + +F  L+     ++    ++++   ++  +  + +A + R   E+EE
Sbjct: 845 QIKDSLEGLKEGLELFRELNDLKEFNM--IPKEELEQRIQLGETTMKSA-LERSLNEQEE 901

Query: 871 ---QQNRQRQEAAR---QAALAEEARRKAEEQKKYL-LEK-----RKLEDEQKRLRQQEE 918
              +Q+ +  EA +   +  L E+ R K EE+ + L LEK     RKL+DE ++L Q+ E
Sbjct: 902 FEKEQSAKIDEARKILEENELKEQERMKQEEEARRLKLEKQAEEYRKLQDEAQKLIQERE 961


>gi|365758512|gb|EHN00349.1| Ctr9p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
          Length = 1042

 Score =  149 bits (376), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 242/1020 (23%), Positives = 431/1020 (42%), Gaps = 190/1020 (18%)

Query: 6   IPVQNSEEEVRVALD-QLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQILE 64
           IP++ SEE V + L+  LP D +D+  +L  E +  + WL IA  Y   GK  +  +++E
Sbjct: 9   IPLKASEELVGIDLETDLPDDPTDLKTLLVEESSEKEHWLTIALAYCNHGKTNEGIKLIE 68

Query: 65  EGSSPEIDEYYADVRYERIAILNALGVYYTYLGK-----IETKQREKEEHFILATQYYNK 119
              +            ER ++   L   +  L K     +ETK++E      L     N 
Sbjct: 69  MALN-------VFQNSERASLHTFLTWAHLNLAKGHSLSMETKEQE------LTQAELNL 115

Query: 120 ASRIDMHEPSTWVGKG----QLLLAKGEVEQA---SSAFKIVLEAD--------RDNVPA 164
              I   +P TW+G      +L   +G  ++A   S  F   + A+        + N   
Sbjct: 116 KDAIGF-DP-TWIGNMLATVELYYQRGHYDKALETSDLFVKSIHAEDHRSGRQSKPNCLF 173

Query: 165 LLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRAL 224
           LL +A + + +  Y  SL+ ++  L ++P      R+GIGLC ++L     A +++QRAL
Sbjct: 174 LLLRAKLLYQKKNYMASLKIFQELLVINPVLQPDPRIGIGLCFWQLKDPKMAIRSWQRAL 233

Query: 225 QLDPENVEALVALAVMDLQAN-----------EAAGIRKGMEKMQRAFEIYPYCAMALNY 273
           Q++ +N  A + + + +   +           EA G  K +  +   F       + L  
Sbjct: 234 QINSKNTSASILVLLGEFHDSLIDSSNDDTFKEAFG--KALIDLNTVFSENQNHPVLLTL 291

Query: 274 LANHFFFTGQHFLVEQLTETALAVTNHGPTK----------SHSYYNLARSYHSKGDYEK 323
           L  +++F G +       +T L + +H   K          S S +   R++++ GDY K
Sbjct: 292 LQTYYYFKGDY-------QTVLNIYHHKIIKMSPLIAKTVLSESSFWCGRAHYALGDYRK 344

Query: 324 AGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALG 383
           + + +  S+K   K  + +    GLGQ Q+K      ++  FE    +Y  N E+L+ L 
Sbjct: 345 SFIMFQESLK---KNEDNLLAKLGLGQTQIKNNLLEESIITFEN---LYKTN-ESLQELN 397

Query: 384 HIYVQL-------GQI-------------EKAQELLRKAAKIDPRDAQAFIDLGELLISS 423
           +I   L       G++             EKA + L +  K+        I     L+ S
Sbjct: 398 YILGMLYAGKALDGKMIKNLPAKELSNLNEKALKYLERYLKLALAMKNQLIISRAYLVIS 457

Query: 424 DTGAALDAFKTARTLLKKAGE--------EVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
               + + +KT+   L KA E        E+P+++LNN+   HF  G+   A   FK A 
Sbjct: 458 QLYESQNQYKTSLDYLSKALEEMEFINQNEIPLDILNNLACYHFINGDLTKADDLFKQA- 516

Query: 476 GDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLL 535
                      K K    D S +                          VT+ +N+AR  
Sbjct: 517 -----------KAKVSETDESVN--------------------------VTLEYNIARTN 539

Query: 536 EQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQ---LSIELVNEALKVNGKY 592
           E+ +D      +Y  I   +  Y+ A +R   +  A++ ++   +S+++ N+ L+VN   
Sbjct: 540 EK-NDPEKFECIYSQITSAHPSYIAARIRNLYLKFAQSKIEDSAMSVQM-NDLLEVNKSD 597

Query: 593 PNALSMLGDLELKNDDWVKAKETFRAASDAT----DGKDSYATLSLGNWNYFAAL----- 643
               S  G   LKN    K  E     +  T       D+YA +SL N     A      
Sbjct: 598 LEIRSFYG-WYLKNSKERKNNEKSTTHNKETLVKYSSHDAYALISLANLYVTIARDGKKS 656

Query: 644 RNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQE 703
           RN K   K + ++L KA +LY +V+     N++AA G  ++ AE  +   + ++  +V++
Sbjct: 657 RNPKEQEKSKHSYL-KAIQLYQKVLQVDPYNIFAAQGVAIIFAESKRLGPALEILRKVRD 715

Query: 704 AASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNT-DAQILLYLARTHY- 761
           +          DV +NLAH Y     F  A++ Y+  L+KF   T    IL  L R  Y 
Sbjct: 716 SLDNE------DVQLNLAHCYLEMREFGKAIENYELALKKFDNETMRPHILNLLGRAWYA 769

Query: 762 ------EAEQWQDCKKSLLRAIHL-----APSNYTLRFDAGVAMQKFS-ASTLQKTR--- 806
                     +Q   ++   A+ L       S +       +A+ +F  A TL+++    
Sbjct: 770 RGMKERSVSFFQKALENAKTALELFVKQSTKSKFIHSVKFNIALLQFQIAETLRRSNPKF 829

Query: 807 RTADEVRSTVAELENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAA 866
           RT  +++ ++  LE  + +F  L+   + ++    ++++   ++  +  + +A + R   
Sbjct: 830 RTVQQIKDSLEGLEEGLSLFKDLNDLKDFNM--IPKEELEQRIQLGETTMKSA-LERSLN 886

Query: 867 EREEQQNRQRQEAARQAALAEEARRKAEEQKKYLLEKRKLEDEQKRLR--QQEEHFQRVK 924
           E+EE +         Q+A  +EAR+  EE +    E+ K E+E KRL+  +Q E ++R++
Sbjct: 887 EQEEYE-------KEQSAKIDEARKTLEENEVKEQERIKQEEETKRLKLEKQAEEYKRLQ 939


>gi|1420046|emb|CAA99166.1| CTR9 [Saccharomyces cerevisiae]
          Length = 1077

 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 235/1012 (23%), Positives = 424/1012 (41%), Gaps = 170/1012 (16%)

Query: 6   IPVQNSEEEVRVALD-QLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQILE 64
           IP++ SEE V + L+  LP D +D+  +L  E +  + WL IA  Y   GK  +  +++E
Sbjct: 21  IPLKASEELVGIDLETDLPDDPTDLKTLLVEENSEKEHWLTIALAYCNHGKTNEGIKLIE 80

Query: 65  EGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRID 124
                 +D +      ER ++   L   +  L K ++   E +EH +   +  N    I 
Sbjct: 81  MA----LDVFQNS---ERASLHTFLTWAHLNLAKGQSLSVETKEHELTQAEL-NLKDAIG 132

Query: 125 MHEPSTWVGKG----QLLLAKGEVEQA---SSAFKIVLEAD--------RDNVPALLGQA 169
             +P TW+G      +L   +G  ++A   S  F   + A+        + N   LL +A
Sbjct: 133 F-DP-TWIGNMLATVELYYQRGHYDKALETSDLFVKSIHAEDHRSGRQSKPNCLFLLLRA 190

Query: 170 CVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPE 229
            + + +  Y  SL+ ++  L ++P      R+GIGLC ++L     A +++QRALQL+P+
Sbjct: 191 KLLYQKENYMASLKIFQELLVINPVLQPDPRIGIGLCFWQLKDSKMAIKSWQRALQLNPK 250

Query: 230 NVEALVALAVMDLQ------ANEAA---GIRKGMEKMQRAFEIYPYCAMALNYLANHFFF 280
           N  A + + + + +       N+        K +  +   F    +  + L  L  +++F
Sbjct: 251 NTSASILVLLGEFRESFTNSTNDKTFKEAFTKALSDLNNIFSENQHNPVLLTLLQTYYYF 310

Query: 281 TGQHFLVEQLTETALAVTNHGPTK----------SHSYYNLARSYHSKGDYEKAGLYYMA 330
            G +       +T L + +H   K          S S +   R++++ GDY K+ + +  
Sbjct: 311 KGDY-------QTVLDIYHHRILKMSPMIAKIVLSESSFWCGRAHYALGDYRKSFIMFQE 363

Query: 331 SVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYV--- 387
           S+K   K  + +    GLGQ Q+K      ++  FE + +      E    LG +Y    
Sbjct: 364 SLK---KNEDNLLAKLGLGQTQIKNNLLEESIITFENLYKTNESLQELNYILGMLYAGKA 420

Query: 388 -------------QLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKT 434
                        Q    EKA + L +  K+        +     L+ S      + +KT
Sbjct: 421 FDAKTAKNTSAKEQSNLNEKALKYLERYLKLTLATKNQLVISRAYLVISQLYELQNQYKT 480

Query: 435 ARTLLKKAGE-------EVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSK 487
           +   L KA E       E+P+EVLNN+   HF  G+F  A   FK A             
Sbjct: 481 SLDYLSKALEEMEFIKKEIPLEVLNNLACYHFINGDFIKADDLFKQA------------- 527

Query: 488 TKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVL 547
            K  V D   S+                         +T+ +N+AR  E+ +D   +  +
Sbjct: 528 -KAKVSDKDESV------------------------NITLEYNIARTNEK-NDCEKSESI 561

Query: 548 YRLILFKYQDYVDAYLRLAAIAKARNNLQ---LSIELVNEALKVNGKYPNALSMLGDLEL 604
           Y  +   +  Y+ A +R   +  A++ ++   +S E+ N+ L +N       S  G   L
Sbjct: 562 YSQVTSLHPAYIAARIRNLYLKFAQSKIEDSDMSTEM-NKLLDLNKSDLEIRSFYG-WYL 619

Query: 605 KNDDWVKAKETFRAASDAT----DGKDSYATLSLGNWNYFAAL-----RNEKRAPKLEAT 655
           KN    K  E     +  T    +  D+YA +SL N     A      RN K   K + +
Sbjct: 620 KNSKERKNNEKSTTHNKETLVKYNSHDAYALISLANLYVTIARDGKKSRNPKEQGKSKHS 679

Query: 656 HLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPD 715
           +L KA +LY +V+     N++AA G  ++ AE  +   + ++  +V+++          D
Sbjct: 680 YL-KAIQLYQKVLQVDPFNIFAAQGLAIIFAESKRLGPALEILRKVRDSLDNE------D 732

Query: 716 VWINLAHVYFAQGNFALAMKMYQNCLRKF-YYNTDAQILLYLARTHY-------EAEQWQ 767
           V +NLAH Y     +  A++ Y+  L+KF    T   IL  L R  Y           +Q
Sbjct: 733 VQLNLAHCYLEMREYGKAIENYELVLKKFDNEKTRPHILNLLGRAWYARAIKETSVNFYQ 792

Query: 768 DCKKSLLRAIHL-----APSNYTLRFDAGVAMQKFS-ASTLQKTR---RTADEVRSTVAE 818
              ++   A+ L     + S +       +A+  F  A TL+++    RT  +++ ++  
Sbjct: 793 KALENAKTALDLFVKESSKSKFIHSVKFNIALLHFQIAETLRRSNPKFRTVQQIKDSLEG 852

Query: 819 LENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQE 878
           L+  + +F  L+     ++    ++++   ++  +  + +A + R   E+EE +  QR +
Sbjct: 853 LKEGLELFRELNDLKEFNM--IPKEELEQRIQLGETTMKSA-LERSLNEQEEFKKEQRAK 909

Query: 879 AARQAALAEEAR-------RKAEEQKKYLLEK-----RKLEDEQKRLRQQEE 918
                 + EE         ++ EE ++  LEK     RKL+DE +++ Q  E
Sbjct: 910 IDEARKILEENELKEQGWMKQEEEARRLKLEKQAEEYRKLQDEAQKIFQVRE 961


>gi|886951|emb|CAA88282.1| orf7 [Saccharomyces cerevisiae]
          Length = 1045

 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 235/1012 (23%), Positives = 424/1012 (41%), Gaps = 170/1012 (16%)

Query: 6   IPVQNSEEEVRVALD-QLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQILE 64
           IP++ SEE V + L+  LP D +D+  +L  E +  + WL IA  Y   GK  +  +++E
Sbjct: 21  IPLKASEELVGIDLETDLPDDPTDLKTLLVEENSEKEHWLTIALAYCNHGKTNEGIKLIE 80

Query: 65  EGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRID 124
                 +D +      ER ++   L   +  L K ++   E +EH +   +  N    I 
Sbjct: 81  MA----LDVFQNS---ERASLHTFLTWAHLNLAKGQSLSVETKEHELTQAEL-NLKDAIG 132

Query: 125 MHEPSTWVGKG----QLLLAKGEVEQA---SSAFKIVLEAD--------RDNVPALLGQA 169
             +P TW+G      +L   +G  ++A   S  F   + A+        + N   LL +A
Sbjct: 133 F-DP-TWIGNMLATVELYYQRGHYDKALETSDLFVKSIHAEDHRSGRQSKPNCLFLLLRA 190

Query: 170 CVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPE 229
            + + +  Y  SL+ ++  L ++P      R+GIGLC ++L     A +++QRALQL+P+
Sbjct: 191 KLLYQKENYMASLKIFQELLVINPVLQPDPRIGIGLCFWQLKDSKMAIKSWQRALQLNPK 250

Query: 230 NVEALVALAVMDLQ------ANEAA---GIRKGMEKMQRAFEIYPYCAMALNYLANHFFF 280
           N  A + + + + +       N+        K +  +   F    +  + L  L  +++F
Sbjct: 251 NTSASILVLLGEFRESFTNSTNDKTFKEAFTKALSDLNNIFSENQHNPVLLTLLQTYYYF 310

Query: 281 TGQHFLVEQLTETALAVTNHGPTK----------SHSYYNLARSYHSKGDYEKAGLYYMA 330
            G +       +T L + +H   K          S S +   R++++ GDY K+ + +  
Sbjct: 311 KGDY-------QTVLDIYHHRILKMSPMIAKIVLSESSFWCGRAHYALGDYRKSFIMFQE 363

Query: 331 SVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYV--- 387
           S+K   K  + +    GLGQ Q+K      ++  FE + +      E    LG +Y    
Sbjct: 364 SLK---KNEDNLLAKLGLGQTQIKNNLLEESIITFENLYKTNESLQELNYILGMLYAGKA 420

Query: 388 -------------QLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKT 434
                        Q    EKA + L +  K+        +     L+ S      + +KT
Sbjct: 421 FDAKTAKNTSAKEQSNLNEKALKYLERYLKLTLATKNQLVISRAYLVISQLYELQNQYKT 480

Query: 435 ARTLLKKAGE-------EVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSK 487
           +   L KA E       E+P+EVLNN+   HF  G+F  A   FK A             
Sbjct: 481 SLDYLSKALEEMEFIKKEIPLEVLNNLACYHFINGDFIKADDLFKQA------------- 527

Query: 488 TKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVL 547
            K  V D   S+                         +T+ +N+AR  E+ +D   +  +
Sbjct: 528 -KAKVSDKDESV------------------------NITLEYNIARTNEK-NDCEKSESI 561

Query: 548 YRLILFKYQDYVDAYLRLAAIAKARNNLQ---LSIELVNEALKVNGKYPNALSMLGDLEL 604
           Y  +   +  Y+ A +R   +  A++ ++   +S E+ N+ L +N       S  G   L
Sbjct: 562 YSQVTSLHPAYIAARIRNLYLKFAQSKIEDSDMSTEM-NKLLDLNKSDLEIRSFYG-WYL 619

Query: 605 KNDDWVKAKETFRAASDAT----DGKDSYATLSLGNWNYFAAL-----RNEKRAPKLEAT 655
           KN    K  E     +  T    +  D+YA +SL N     A      RN K   K + +
Sbjct: 620 KNSKERKNNEKSTTHNKETLVKYNSHDAYALISLANLYVTIARDGKKSRNPKEQGKSKHS 679

Query: 656 HLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPD 715
           +L KA +LY +V+     N++AA G  ++ AE  +   + ++  +V+++          D
Sbjct: 680 YL-KAIQLYQKVLQVDPFNIFAAQGLAIIFAESKRLGPALEILRKVRDSLDNE------D 732

Query: 716 VWINLAHVYFAQGNFALAMKMYQNCLRKF-YYNTDAQILLYLARTHY-------EAEQWQ 767
           V +NLAH Y     +  A++ Y+  L+KF    T   IL  L R  Y           +Q
Sbjct: 733 VQLNLAHCYLEMREYGKAIENYELVLKKFDNEKTRPHILNLLGRAWYARAIKETSVNFYQ 792

Query: 768 DCKKSLLRAIHL-----APSNYTLRFDAGVAMQKFS-ASTLQKTR---RTADEVRSTVAE 818
              ++   A+ L     + S +       +A+  F  A TL+++    RT  +++ ++  
Sbjct: 793 KALENAKTALDLFVKESSKSKFIHSVKFNIALLHFQIAETLRRSNPKFRTVQQIKDSLEG 852

Query: 819 LENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQE 878
           L+  + +F  L+     ++    ++++   ++  +  + +A + R   E+EE +  QR +
Sbjct: 853 LKEGLELFRELNDLKEFNM--IPKEELEQRIQLGETTMKSA-LERSLNEQEEFKKEQRAK 909

Query: 879 AARQAALAEEAR-------RKAEEQKKYLLEK-----RKLEDEQKRLRQQEE 918
                 + EE         ++ EE ++  LEK     RKL+DE +++ Q  E
Sbjct: 910 IDEARKILEENELKEQGWMKQEEEARRLKLEKQAEEYRKLQDEAQKIFQVRE 961


>gi|150865668|ref|XP_001384981.2| protein required for normal CLN1 and CLN2 G1 cyclin expression
           [Scheffersomyces stipitis CBS 6054]
 gi|149386924|gb|ABN66952.2| protein required for normal CLN1 and CLN2 G1 cyclin expression
           [Scheffersomyces stipitis CBS 6054]
          Length = 1120

 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 214/923 (23%), Positives = 391/923 (42%), Gaps = 139/923 (15%)

Query: 2   ACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQ 61
           A + +P+ N +      +D+LP D  ++   L+ E      W+ +A  Y + GK+E+   
Sbjct: 20  AILDVPLSNGQIVSINLVDELPDDPVELESFLEGENCSKKYWISVASAYAQLGKLEEALH 79

Query: 62  ILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNK-A 120
           I++      +D+  A    E     ++  V+  +  K  +   +KE +   A    N  A
Sbjct: 80  IIQTA----LDKNPAHFSDEDNKSFHSFLVWLYF--KFVSHGIDKENYLKKAGSEINSLA 133

Query: 121 SRI-------DMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEF 173
            RI         +  S  + +  LLL  G  ++A   F  +L  D++N  ALLG+A    
Sbjct: 134 QRIRADNSTSTTNSTSNLLSQAVLLLFNGRDDEALDIFDKILRIDQNNCFALLGKARAVL 193

Query: 174 NRGR-YSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 232
           N+ + Y+ +L+ Y++ L ++P      R+GIGLC + L     A QA+ RAL++DP N++
Sbjct: 194 NKTKNYAAALKLYQQVLILNPVIKPDPRIGIGLCFWFLKDDRMAVQAWNRALEIDPTNLK 253

Query: 233 ALVALAVMDLQANEAAGI---------RKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQ 283
           A V L + + Q      +         +  + ++    +  P  +  L  LA+++F    
Sbjct: 254 AKVLLNLANFQKTFINSLSDDEFLENYKSCLSQLASNHKESPSESSILLALASYYFSKES 313

Query: 284 HFLVEQLTETALAVTNHGPTKSHSYYN-------------------LARSYHSKGDYEKA 324
           + +V  +   A  V N    ++ + +N                   L R    K ++  A
Sbjct: 314 YDVVSSIV--AKVVKNMTGDENLTRFNSFSKVSKYQSNILSECAAWLGRIEFVKANFTPA 371

Query: 325 GLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGH 384
             Y+  ++K +N  +  +    GLGQ Q   G    A+  +E +L       E   ALG 
Sbjct: 372 SKYFQEAIK-LNDAN--LLAKIGLGQSQYNRGSIEEAVMTYESILRSNVKCLEANYALGL 428

Query: 385 IYVQLGQIEKAQ---ELLRKAAKI---------------------DPRDAQAFIDLGELL 420
           +Y +    +K Q   ++L +  ++                     +P    A++ L +L 
Sbjct: 429 LYAKQKSRKKQQAAIQILERYIRLSNNLGLSASHKDEDGSEFLNKEPITLNAYLVLSKLY 488

Query: 421 ISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIW 480
            ++D   +L+    A    K+ G++VP+EV NNIGV +F K  ++ A   F+ AL     
Sbjct: 489 ETTDINQSLNYLNRAIESRKQIGKDVPLEVYNNIGVFNFMKQNYDDAAAHFQTAL----- 543

Query: 481 LTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGN-HVELPWN-KVTVLFNLARLLEQI 538
                        D   +  QF           DG+  V+LP + K+++ +NLAR  ++I
Sbjct: 544 -------------DIVKNTDQF--------VSADGDVMVDLPTDLKISLTYNLARS-KEI 581

Query: 539 HDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSM 598
            +   A  +Y  +L +  +Y  A +R+  +     N   S +L  E +KV      A++ 
Sbjct: 582 SNESEAIDIYESLLAECPNYFSAKIRILFL-----NCVTSHKLSKEDIKVEIDQLLAVNA 636

Query: 599 LGDLELKN-DDWVKAK--ETFRAASDAT-----------DGKDSYATLSLGNWNYFAALR 644
             DLE+++   W      +    A DA            D  D YA +SL N     A  
Sbjct: 637 -SDLEIRSFYGWFVKNFGKKLGLAPDADTNHQKDTLVEYDSHDCYALISLANIYCIMARD 695

Query: 645 NEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEA 704
            +  +   +  +  +A EL+ +V+     N+YAA G  +   E        ++  +++++
Sbjct: 696 VKSGSEDKKKKYYVRAVELFAKVLSVDPKNVYAAQGLAIAYIENKDSVKGLEILRKIRDS 755

Query: 705 ASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHY--- 761
                 +    +++NL HV     ++   ++ Y+  L +F    D++IL +L R  Y   
Sbjct: 756 ------LNDISIYLNLGHVLVESKSYGKGIENYELALGRFTDGKDSRILSFLGRAWYLRA 809

Query: 762 EAEQWQDCKKSLLRAIHLA------PSNYTLRFD-AGVAMQKFSASTLQKT-RRTADEVR 813
            AE+  +  K  +    LA      P + ++RF+ A +  Q     T Q   +R  DE+ 
Sbjct: 810 SAEKNLNFFKKAIEYTELALDCSTGPGS-SIRFNLAYLHFQIAELITKQPVGQRKIDEIE 868

Query: 814 STVAELENAVRVFSHLSAASNLH 836
           + +A LE+ V + + LS+    H
Sbjct: 869 AAIAGLESGVAILNELSSEDEKH 891


>gi|393217141|gb|EJD02630.1| TPR-like protein [Fomitiporia mediterranea MF3/22]
          Length = 1112

 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 241/1027 (23%), Positives = 413/1027 (40%), Gaps = 180/1027 (17%)

Query: 10  NSEEEVRVALDQLPRDASDILDIL--KAEQAPLDLWLIIAREYFKQGKVEQFRQILE--- 64
           + +E V + LD L  D  D +D+L      A + +W  +A EY K G  E   + LE   
Sbjct: 22  SGQEIVAIDLDTLDPDPQDYIDLLLEAKSNATVSMWTRLACEYCKMGLYESAEKCLEAVV 81

Query: 65  -EGSSPEIDEYYADVRYERIAILNALGVYYTYL--GKIETKQREKEEHFILATQYYNKAS 121
            EG  P+     AD     I +  A       L   + +   +E  + F     Y+NKA+
Sbjct: 82  NEGGYPKSALTPADQLLANIQLARARKAPKIILENARQDNLTKEHPKEF-----YHNKAA 136

Query: 122 R------IDMHEP----STWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACV 171
           R      ID  +     +T + +G   LAKG+++ A  AF +V+     N+ ALLG+A +
Sbjct: 137 RQLNLGQIDFSDSKYRFNTILIRGIFHLAKGDLDDAMKAFTLVINQKPTNIVALLGKARI 196

Query: 172 EFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENV 231
            + R +Y  +L  ++R L++ P      R+GIGLC + + Q  KA+  +QR+L++ P N 
Sbjct: 197 AYARKQYPQALRTFQRVLELKPDALPDPRIGIGLCFWAMDQKVKAKACWQRSLEVHPSNW 256

Query: 232 EALVALAVMDLQANE---------AAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTG 282
            A + L +  + +++              +G +  +RAF++    A A N L + F   G
Sbjct: 257 SACLLLGLEAINSSKNPDDDDTERTESFIRGTKFCERAFKLNNRNAAAANVLFDLFLQRG 316

Query: 283 QHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFI 342
              +  +L E  +         S  + +  R    +G    A  ++ A++K   K    +
Sbjct: 317 DKKVSLKLAERTIQFAETLALFSAGHIHAGRLAQMEGSSAGAMRHFNAALKGNPK---NV 373

Query: 343 FPYYGLGQVQLKLGDFRSALTNFEKVLE-IYPDNC---ETLKALGHIYVQLG-------- 390
               GL Q Q+K  +  +A+   + +++   P  C     L A    Y + G        
Sbjct: 374 LAAIGLAQTQIKTDEMPAAIHTLDTLMQPPNPQRCLEATVLLASLRAYPRPGFSSADAAQ 433

Query: 391 QIEKAQELLRKAAK----IDP--------------------RDAQAFIDLGELLISSDTG 426
           + +KA++L  +  K     DP                    +    F D  ELL+ +   
Sbjct: 434 ERQKARDLYEQVLKAMDLFDPAGLNGSGTRTRSKDEAYTHRKAISNFGDDVELLVEAARL 493

Query: 427 AALDAFKTARTLLK----------KAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALG 476
              +     R LL+          +AG      +LNN+ V+    GE   A   ++ AL 
Sbjct: 494 WQDENRPRMRRLLEEAVRVVQERVQAGGSPEPRLLNNLAVLKHNAGELAEARTMYEIALT 553

Query: 477 DGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLE 536
           +        S  +  V +  A+                           TVL+NLAR+ E
Sbjct: 554 EA-------SSMEGAVGEGMAT---------------------------TVLYNLARVYE 579

Query: 537 QIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNAL 596
              +T+ A   Y  +L ++ +Y DA +R A +  + +    + E +  AL       N  
Sbjct: 580 DQGETIIAKDAYDKLLGRHPEYNDAKVRQAQLQVSLSRYDDAHEWLKSALSSQKSNLNLR 639

Query: 597 SMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEAT- 655
           S L    L +   +K    F   +          +L    W +F   R E R P      
Sbjct: 640 SALSHF-LISRQQIKLARDFTTTTLKEGASHDVYSLCAAAWTFFNTAR-ENRDPSPAGAA 697

Query: 656 ----HLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKG-----------QFDVSK----- 695
               H  +A E+Y R +        AA G  +++AE             Q D  +     
Sbjct: 698 DRRKHFIRAAEIYERALQFDPKCAIAAQGLAIIVAEDALGPVKAPGVVIQDDAMRRVQGA 757

Query: 696 ----DLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYN-TDA 750
               D+F +V+E+ + S       V++N+ H YF +  F  A++ Y+   ++   +  D 
Sbjct: 758 REALDIFAKVRESMNDS------SVYVNMGHCYFVRDEFDRAIESYETAAKRASASGPDV 811

Query: 751 QILLYLARTHYE---AEQWQDCKKSLL----RAIHLAPSNYTLRFDAGVAMQKFSASTLQ 803
            I+  L R  Y     +Q     KS L    RA+HLAP      ++  +  QK +   L 
Sbjct: 812 TIIHCLCRAWYSKALKDQSFVALKSALSFAQRALHLAPQEKASMYNLAMIEQKAAEMLLG 871

Query: 804 KTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHR 863
            +       + ++A+L+   RV  H + A  L      +K  N  V Y + + D  + + 
Sbjct: 872 TS-----PAKRSLADLK---RVVEHGAHAQQLFASLAADKSPN--VPYSREIADQRRKYG 921

Query: 864 EAAER--EEQQNRQRQ-EAARQAALAEEARRKAEEQKKYLLEK-----------RKLEDE 909
           E+  R  +EQ   Q Q EAA++A LAE  +++ +E++K                +KL +E
Sbjct: 922 ESILRRADEQVTAQEQHEAAQEARLAEARQKRLDEKRKAAEAAELRAAQIEENAKKLAEE 981

Query: 910 QKRLRQQ 916
           +K+ R++
Sbjct: 982 RKKAREE 988


>gi|157812816|gb|ABV81153.1| putative CG2469-like protein [Antheraea paukstadtorum]
          Length = 173

 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 75/173 (43%), Positives = 108/173 (62%)

Query: 147 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 206
           A + F  VL    +NVP+LLG+AC+ FNR  Y  +L FYK+AL+ +P  P A+RLG+G C
Sbjct: 1   ADAQFNFVLNQSPNNVPSLLGKACIAFNRKDYRGALAFYKKALRTNPDSPAALRLGMGHC 60

Query: 207 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY 266
             KL    KAR AF+RALQLDP+ V ALV L+++ L   E    +K +  + +A+ I P 
Sbjct: 61  FMKLNNQEKARMAFERALQLDPQCVGALVGLSILKLNLQENESNKKAVIMLSKAYAIDPK 120

Query: 267 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 319
             M LN+LANHFFF   +  V+ L   A   T +   ++ S ++LAR++H++G
Sbjct: 121 NPMVLNHLANHFFFKKDYNKVQHLALHAFHNTENEAMRAESCHHLARAFHAQG 173



 Score = 42.4 bits (98), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 33/122 (27%), Positives = 58/122 (47%), Gaps = 6/122 (4%)

Query: 347 GLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLK-ALGHIYVQLGQIEKAQELLRKAAKI 405
           G   +     D+R AL  ++K L   PD+   L+  +GH +++L   EKA+    +A ++
Sbjct: 21  GKACIAFNRKDYRGALAFYKKALRTNPDSPAALRLGMGHCFMKLNNQEKARMAFERALQL 80

Query: 406 DPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIE--VLNNIGVIHFEKGE 463
           DP+   A + L  L ++       ++ K A  +L KA    P    VLN++    F K +
Sbjct: 81  DPQCVGALVGLSILKLNLQEN---ESNKKAVIMLSKAYAIDPKNPMVLNHLANHFFFKKD 137

Query: 464 FE 465
           + 
Sbjct: 138 YN 139


>gi|262302939|gb|ACY44062.1| SH2 domain binding protein [Leiobunum verrucosum]
          Length = 169

 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 74/169 (43%), Positives = 105/169 (62%)

Query: 147 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 206
           A + F  VL    +N+P+LLG+AC+ FN+  Y  +L FYK+AL+ +P CP A+RLG+G C
Sbjct: 1   ADAQFNFVLNQAPNNIPSLLGKACIAFNKKDYRGALAFYKKALRTNPKCPAAVRLGMGHC 60

Query: 207 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY 266
            YKL ++ KAR AF+RAL LD + V ALV LAV++L       IR G++ + +A+ I   
Sbjct: 61  FYKLNKIEKARMAFERALHLDSQCVGALVGLAVLELNLKTQESIRNGVQMLSKAYTIDST 120

Query: 267 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSY 315
             M LN+LANHFFF   +  V  L   A   T +   ++ S Y LAR++
Sbjct: 121 NPMVLNHLANHFFFKKDYEKVRHLALHAFHNTENEAMRAESCYQLARAF 169


>gi|121712616|ref|XP_001273919.1| RNA polymerase II transcription elongation factor (Ctr9), putative
            [Aspergillus clavatus NRRL 1]
 gi|119402072|gb|EAW12493.1| RNA polymerase II transcription elongation factor (Ctr9), putative
            [Aspergillus clavatus NRRL 1]
          Length = 1229

 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 246/1047 (23%), Positives = 429/1047 (40%), Gaps = 201/1047 (19%)

Query: 2    ACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQ 61
            + + IP    + EV V+L+ LP D +++  +L+ E+A  + W+IIA  Y KQ +++    
Sbjct: 33   SAIDIPASTLDSEVEVSLEGLPDDPTELCTLLENEKAAKNFWVIIALAYAKQKQIDHAID 92

Query: 62   ILEEGSSPEIDEYYADVRYERIAILNALGVYYTYL-----------GKIETKQREKEEHF 110
            IL +G    +         E++ +L A   +   L           G++ T+ + K+ + 
Sbjct: 93   ILNKG----LASVAHGATKEKLGLL-AWVCWLLMLKSRQAPRVAPEGELYTEAKTKDHYL 147

Query: 111  ILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-----------------VEQASSAFKI 153
             LAT   N+ASR++   P  ++ +G L L +                   VE    A K 
Sbjct: 148  QLATSTLNEASRLNPAFPPLFLARGVLSLLRASLHPPRPARPGSVDTSERVESLRQALKC 207

Query: 154  VLEADR----DNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGA-IRLGIGLCRY 208
              E+ +     NV A++G+A  ++  GRY+++LE Y++ L   P+      R+GIG C +
Sbjct: 208  FDESSKAFGGRNVMAIMGRARAQYLLGRYAEALEGYQKVLMKMPTLTDPDPRIGIGCCLW 267

Query: 209  KLGQLGKARQAFQRALQLDPENVEALVALAVMDL-------QANEAAG--IRKGMEK-MQ 258
            +LG   +A+ A++RAL L+P++  A + LAV  L         + A G   +  M +  Q
Sbjct: 268  QLGFKDQAKVAWERALALNPDSKVANILLAVYYLYDSSRHATTDPAFGSLYKVAMTQYTQ 327

Query: 259  RAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARS---- 314
            +AF++     M       +F     +  VE L   A+  T+     S  +Y L R     
Sbjct: 328  KAFKLDKEYPMTCALFGGYFLLRKSYSTVETLARKAIERTDVMSIASDGWYLLGRKAHYE 387

Query: 315  --------YHSKGD--------------------------YEKAGLYYMASVKEINKPH- 339
                    Y+S+ D                          Y+ A       +++   P  
Sbjct: 388  GDLAHAAEYYSRSDQARGGGEKGYLPAKFGAVQMQVSNQSYDDAKFRLEKIIQQTKNPEC 447

Query: 340  ---------EFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLG 390
                     E +F     G  + K  + + A++  E V  ++ D  + +     + V L 
Sbjct: 448  MILLGALHAEEVFAAQRSGSKEDKSAEAKKAISLLESVRSLWKDEGKKIVPDESVLVYLS 507

Query: 391  QIEKAQELLRKAAKIDP-RDAQAFIDLGELL---ISSDTGA-ALDAFKTARTLLKKAGEE 445
            ++ +         +I P +  Q    L E+    IS D     ++     + +L+     
Sbjct: 508  RLYE---------QIAPEKSMQCLTQLEEMQLAEISEDERPEGIEDEAEIKAVLRA---N 555

Query: 446  VPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDM 505
            +P  +LNN+G   ++  + E A   F+ AL                  DA A   Q KD 
Sbjct: 556  LPPPLLNNMGCFLYQAEKIEQARALFQAAL------------------DACARS-QEKDP 596

Query: 506  QLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRL 565
            QL      D + +       T+ +NL R  E  +    A   +  +L ++ DY +A  RL
Sbjct: 597  QL------DTDAL-----VTTISYNLGRAYEASNMQEEAKKAFERLLERHSDYTEANARL 645

Query: 566  AAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKND-DWVKAKETFRAASDATD 624
              IA       L     +E  K   K   A S   +LE++    W  +K   RAA+ A D
Sbjct: 646  TYIA-------LRQSPTDEGPKKMAKLYEADST--NLEVRALFGWYLSKSKKRAANLAED 696

Query: 625  GK--------------DSYATLSLGNWNYFAA--LRNEKRAPKLEATHL-EKAKELYTRV 667
             +              D Y+   +GN +   A  +R +    K +   + E+A E + + 
Sbjct: 697  HEQRHFKHTLQYYDKHDRYSLTGMGNVHLTTARDMRRDTDQDKDKRRKMYERAVEFFDKA 756

Query: 668  IVQHTSNLYAANGAGVVLAEKGQFDVSK-DLFTQVQEAASGSVFVQMPDVWINLAHVYFA 726
            +     N YAA G  + L +  +   S   +F++V++       ++   V++NL HVY  
Sbjct: 757  LQLDPKNAYAAQGIAIALVDDKKDHASAVHIFSKVRDT------LRDASVYLNLGHVYAE 810

Query: 727  QGNFALAMKMYQNCLRKFYYNTDAQILLYLART---HYEAEQWQDCKKSLL----RAIHL 779
               ++ +++ Y+  L K     DAQIL  L R      + E      K+ L    RA  +
Sbjct: 811  LRQYSRSIEHYEAALSKDRAR-DAQILACLGRVWLLKGKQEMSLSAMKTALDYAQRAHAV 869

Query: 780  APSNYTLRFDAGVAMQKFS--ASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASN-LH 836
            APS   L F+      + +  A +L +T++T  +V      L  AV  F  ++   N  +
Sbjct: 870  APSQAHLEFNVAFVQNQIASLAYSLPETQKTVQDVEEAAEGLHQAVETFGRIAQVKNPPY 929

Query: 837  LHGFDEKKINTHVEYCKHLLDAAKIHRE-----------AAEREEQQNRQRQEAARQAAL 885
              G  E++ N      K L  A +  RE           A E  E + R+R+   R+A  
Sbjct: 930  PAGALEQRANMGKTIIKQLERALQSQREYEEKNAAKLQQAREAREAEIRKREAEVRKAQE 989

Query: 886  AEEARRK--AEEQKKYLLEKRKLEDEQ 910
            AE+ R+K  AEE+++ + E ++L +++
Sbjct: 990  AEQTRKKKLAEERQQMIEEAQRLAEQR 1016


>gi|157939601|gb|ABW05525.1| SH2 domain binding protein [Mastigoproctus giganteus]
          Length = 177

 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 74/177 (41%), Positives = 105/177 (59%)

Query: 147 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 206
           A + F  VL    +N+P+LLG+AC  FN+  Y  +L FY +A + +P CP A+RLG+G C
Sbjct: 1   ADAQFNFVLNQSPNNIPSLLGKACXSFNKKDYXGALAFYXKAXRTNPXCPXAVRLGMGHC 60

Query: 207 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY 266
            YKLG+  KAR AF+RAL LDP  V ALV  AV +L       I+ G Z + +A+ I   
Sbjct: 61  FYKLGKHDKARLAFERALHLDPXCVGALVGXAVXELNQKTPESIKNGXZMLSKAYXIEST 120

Query: 267 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEK 323
             M LN+LANHFFF   +  V+ L   A   T +   ++ S Y LAR++  + DY++
Sbjct: 121 NPMVLNHLANHFFFKKXYXKVQHLALHAFHNTENEAMRAESCYQLARAFQVQEDYDQ 177


>gi|302410999|ref|XP_003003333.1| tetratricopeptide repeat protein [Verticillium albo-atrum VaMs.102]
 gi|261358357|gb|EEY20785.1| tetratricopeptide repeat protein [Verticillium albo-atrum VaMs.102]
          Length = 991

 Score =  146 bits (369), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 203/851 (23%), Positives = 359/851 (42%), Gaps = 150/851 (17%)

Query: 2   ACVYIPVQNSEEE--VRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQF 59
           + + +PV    E+  V + L+ L  D +++  +L+ E+A    W+ +A  Y KQ  ++  
Sbjct: 29  SAIDVPVHGEAEDEAVEIDLEALFDDPTEVCTLLENERAARTYWMTVALAYAKQKNIDHA 88

Query: 60  RQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQR-----------EKEE 108
            ++L  G +   D    +   E+++++  L   + YL K+    R           + +E
Sbjct: 89  IEMLVRGGNSMRD----NTPREKLSLIGCL--CWMYLWKVREAPRLPPDGVPASEAKTKE 142

Query: 109 HFI-LATQYYNKASRIDMHEPSTWVGKG--QLLLAKGEVEQASSAFKI----------VL 155
           H++ LAT   N ASRI+   P  ++ +G  QLL A  ++ +A+   K+           L
Sbjct: 143 HYLQLATSTLNDASRINPAFPPLFLARGVLQLLRASLQIPKATGLGKLDNEKADLLRAAL 202

Query: 156 EADRD--------NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGA-IRLGIGLC 206
           +A  D        N+ A++G+A   F+ G++ +SL  Y+  L   P       R+GIG C
Sbjct: 203 KAFEDAIRVSQGKNMLAVMGKARALFSLGKFPESLACYQEVLSKMPDLVDPDPRIGIGAC 262

Query: 207 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQA------NEAAGIR---KGM-EK 256
            ++LG    AR A++R L+++P++    + L +  L A      N    IR   K M E 
Sbjct: 263 FWQLGFKDDARSAWERCLEINPDHKVGNILLGLYYLDASGHVPTNSPDFIRLYKKAMTEY 322

Query: 257 MQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYH 316
            Q++F++     +     AN+F    Q   V+ L   A+  T+     S  +Y LAR  H
Sbjct: 323 TQKSFKLDKNMPLTCATFANYFLSRKQLGTVDTLAHKAIQYTDVNAIASDGWYLLARKEH 382

Query: 317 SKGDYEKAGLYYMAS------------VKEI-----NKPHEF-----------IFPYYGL 348
            +GD  KA  YY  +             +++     +K HE            +F    L
Sbjct: 383 HEGDPSKASDYYRRADDARGGADPRLPARQVWRCPQSKHHEALVLLGTLYAEEVFANQDL 442

Query: 349 GQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPR 408
              + K  + + A+   E V   + D+ + LK    + + L ++ +A+          P 
Sbjct: 443 DAKEDKSAETKKAIGLLESVRGAWRDSKKNLKPDAAVLLNLARLYEAEH---------PD 493

Query: 409 DA-QAFIDLGELLISSDTGAALDAFKTARTLLKKAGEE-VPIEVLNNIGVIHFEKGEFES 466
            A Q  + + +L +   + A     +T     KKA    +P ++LNNIG  + +    E 
Sbjct: 494 KALQCLLQVEQLEMDLVSAADRPPPETDEAETKKALRRFLPPQLLNNIGCFYSQSERHEQ 553

Query: 467 AHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVT 526
           A + F+ AL   +    L  K +   +DA  +                           T
Sbjct: 554 ASELFEAALDACM---KLGEKDEDADVDALVT---------------------------T 583

Query: 527 VLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEAL 586
           + FNL R  E       A  +Y  +L ++ DY DA +RLA I   +   +   E V++  
Sbjct: 584 ISFNLGRSYESRGMLDDAVKVYEELLKRHDDYTDARVRLAYIKLRKFPHKEGPEAVSKLY 643

Query: 587 KVN--------------GKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATL 632
           K N              GK P+     G++  ++D++   K T R      D  D YA +
Sbjct: 644 KENARDLEVRALYGWYLGKVPSR-KRSGNIN-EDDEFRHYKHTLR----DHDKHDRYALV 697

Query: 633 SLGNWNYFAA--LRNEKRAPKLEATHL-EKAKELYTRVIVQHTSNLYAANGAGVVLAE-K 688
             GN +   A  +R +  + K + + +  KA E + + +     N YAA G  + L E +
Sbjct: 698 GAGNLHLLTAREMRRDSDSDKAKRSAMYTKAVEFFEKALSLDPLNAYAAQGIAIALVEDR 757

Query: 689 GQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNT 748
             +  +  +F ++++       V+   V++NL H+Y     ++ A++ Y+  L K   + 
Sbjct: 758 KDYKTALGIFVKIRDT------VKDAHVFVNLGHIYAELRQYSKALENYETALSKEGKSN 811

Query: 749 DAQILLYLART 759
           D  IL  L RT
Sbjct: 812 DPVILACLGRT 822


>gi|190347172|gb|EDK39403.2| hypothetical protein PGUG_03501 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 1074

 Score =  146 bits (369), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 228/997 (22%), Positives = 422/997 (42%), Gaps = 151/997 (15%)

Query: 19  LDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQILEEGSSPEIDEYYADV 78
           +++LP D ++++  L  E+     W+ +AR Y   GK+++  ++L + S       ++D 
Sbjct: 37  VEELPDDPNELISFLNEEKCDRKYWISVARAYSASGKLDEATEVLSQASK---QPSFSDA 93

Query: 79  RYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLL 138
             +R++I ++    +    K  ++   + EH   A +   +  +    + +  + K    
Sbjct: 94  --DRLSIDSSFKWLHL---KYVSQGINRAEHLSAANELIERDFKSAPSDVNNLLAKATYY 148

Query: 139 LAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGR-YSDSLEFYKRALQVHPSCPG 197
             +   +QA   +  + +AD  N  ALLG+A +  N+ + Y   L  Y++ L ++P    
Sbjct: 149 GLEDMADQAWEIYDGIWKADPKNCFALLGKAHIALNKTKNYKSGLRLYQQVLLLNPIMKP 208

Query: 198 AIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKM 257
             R+GIG+C + L     A  +++RAL++D  N  A + + +   Q N+A       E  
Sbjct: 209 DPRIGIGICAWMLNDQEMAVNSWKRALEIDSSNTAAKLLITLS--QFNDAFNKSLSDESF 266

Query: 258 QRAFEIYPYCAMALNYL-------------ANHFFFTGQHFLVEQLTETALAVTNHGPTK 304
                 Y  C + L  L              ++++   Q+ +VE++    L   + G +K
Sbjct: 267 ---ITSYKECLIKLRDLPHSSEDTTILLAFVSYYYSKEQYDIVEKICNNILQKYS-GSSK 322

Query: 305 SHS-----YYN---------LARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQ 350
            HS     Y +         L R   +KGDY ++   +  +++  +     +    GLG 
Sbjct: 323 VHSSKLTPYQSKALSTANSWLGRVSFAKGDYTQSQRSFHEAIRLDDNN---LIAKLGLGL 379

Query: 351 VQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQEL--------LRKA 402
            Q   G    A+  FE VL+  P   E   +LG I+    +  K Q+L        LR +
Sbjct: 380 SQANRGSNEEAIITFESVLKTNPKCLEVNYSLG-IFYSKSKSRKKQDLAISILERYLRLS 438

Query: 403 AKIDPRDAQAFIDLGELLISSDTGAALDAFKT------------ARTLLKKA-------G 443
             +      +  D  E  +SS     L+A  T            + T L KA       G
Sbjct: 439 NNLGSNPTASKKDDDESSLSSKEPIVLNALLTLSRLYEGRDLNQSLTYLSKAIESRTQVG 498

Query: 444 EEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFK 503
             VPIEV NN+GV++F K   + A ++F+ A+ +       +S+ K+  I        F 
Sbjct: 499 LSVPIEVYNNLGVMNFFKNNLDEAKENFEFAVQN----IRKESEEKSDPI--------FD 546

Query: 504 DMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYL 563
           D+ L                  T+ +NLAR  +++ D  AA  +Y+ +  +  +Y  A L
Sbjct: 547 DLSL------------------TIDYNLAR-SQEVSDEKAAISIYKSVTERSSNYFSASL 587

Query: 564 RLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLG-----------DLELKND-DWVK 611
           RL  +     N     ++     ++  + P  L +              + +K D D   
Sbjct: 588 RLLFLDCVSTNESTKEQIRERIEELLEENPANLEIRSFYGWFAKTFGKRIGMKQDADTEH 647

Query: 612 AKETFRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEK----AKELYTRV 667
            K+T        D  DSYA LSL N  Y    R+ K +    A   +K    A EL+T+V
Sbjct: 648 QKKTLV----EYDSHDSYALLSLANI-YCIMARDVKGSGSAVAEKRKKYYIRAIELFTKV 702

Query: 668 IVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQ 727
           I   + N+YAA G  +V  E        ++  +++++      +    V++NL HV    
Sbjct: 703 ISVDSKNVYAAQGLAIVYIENKDSQKGLEILRKIRDS------LNDISVYLNLGHVLLEL 756

Query: 728 GNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAP------ 781
             F+ +++ Y+  L +F   TD++IL +L R  Y     +     L +A+  A       
Sbjct: 757 KQFSKSIENYEIALVRFTSGTDSKILSFLGRAWYMRGLAEKDLFYLKKALDYAQEAQKQS 816

Query: 782 --SNYTLRFDAGVAMQKFS----ASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASNL 835
             S  +LRF+  +A  +F      + +   +R  D+++  +  L  A+   + L++    
Sbjct: 817 GGSQASLRFN--IAYVQFQIAEFITKIAVEQRNVDDIKRAIEGLNEAIETLNSLASDDEA 874

Query: 836 HLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEAARQAAL-AEEARRKAE 894
           H   + + ++ +        L A +++    E EE  N+   + A    L  EEA ++ E
Sbjct: 875 H-PPYPKSELKSRANLGTTTL-ANRLNTCLEETEEYINKVENKLAEAKRLRQEEAAKRLE 932

Query: 895 EQKKYLLEKRKLEDE--QKRLRQQEEHFQRV-KARIF 928
           E++  +L +++ E+E  ++R + QE+  Q V ++R F
Sbjct: 933 EEQNRILRQKQAEEELAKERAKLQEQAQQWVEESRAF 969


>gi|452981934|gb|EME81693.1| hypothetical protein MYCFIDRAFT_50383 [Pseudocercospora fijiensis
           CIRAD86]
          Length = 1210

 Score =  146 bits (368), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 241/1013 (23%), Positives = 402/1013 (39%), Gaps = 199/1013 (19%)

Query: 3   CVYIPVQNSE-EEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQ 61
            + IPV   + EEV + L     D  ++  +L++E      W+ IA  Y KQ K +    
Sbjct: 30  VIDIPVSGEDGEEVTLDLSNPLDDIDELCGLLESENVAKSYWITIALAYIKQNKADLAVD 89

Query: 62  ILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREK----------EEHFI 111
           I++ G    I    +D +   +A L      + YL K     R K          +EH++
Sbjct: 90  IVKRGLE-AIPSARSDDKLSLLACL-----VWIYLWKCRKAPRVKPTQATEDERTKEHWL 143

Query: 112 LATQY-YNKASRIDMHEPSTWVGKGQLLLAKGEVE-------------------QASSAF 151
            A     N ASRI    P  ++ +G LLL K  ++                   QAS  F
Sbjct: 144 GAANIALNDASRISPSYPPLFLARGTLLLLKASLQPTKFGPGGQEHSERIETLRQASKNF 203

Query: 152 KIVLEADRD-NVPALLGQACVEFNRGRYSDSLEFYKRALQ--VHPSCPGAIRLGIGLCRY 208
                   + NV A++G+A  +F+  +Y ++   Y++AL+     + P   R+GIG C +
Sbjct: 204 DDAYRVSGNKNVLAIMGKARTQFSLAKYPEAYILYQQALERATDLTDPDP-RIGIGCCLW 262

Query: 209 KLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANE---------AAGIRKGM-EKMQ 258
           +LG    A++A++RAL+L+  +  A + L +  L  +          A   RK M E  Q
Sbjct: 263 QLGHKENAKEAWERALELNETSTIANILLGLYYLDQSGQYNTTDKAFAPIYRKAMTEYTQ 322

Query: 259 RAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSK 318
            AF++    A+  +    +F        VE+L   A+  T+     S  +Y LAR  H +
Sbjct: 323 TAFKLNDMHALTCSTFGGYFLLRKTWPNVERLARRAIEHTDVNAIASDGWYLLARKDHYE 382

Query: 319 GDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLK--LGDFRSALTNFEKVLEIYPDNC 376
           GD  KA  +Y  + +          P    G VQLK  + D   A    EK+L +   N 
Sbjct: 383 GDLAKAQDHYTKADQARGGDDRGYLPAK-FGAVQLKTLMQDIDGAKFRLEKML-LTNKNV 440

Query: 377 ETLKALGHIY------------------------VQLGQIEKAQELLRKAAKIDPRDAQA 412
           E    LG +Y                        V+L Q+  A +  +K  KI P D+  
Sbjct: 441 EATTLLGVLYAEEVFAAQAAGSKEDKSESKKKAIVRLEQVRVAWKDSKK--KITP-DSAV 497

Query: 413 FIDLG---------------------ELLISSDTGAALDAFKTARTLLKKAGEEV-PIEV 450
            ++L                      EL   SD     D  +T  + ++ A +E+   ++
Sbjct: 498 LLNLARLYEQDAPDKALSCLLHVEQLELAEISDEDLPEDIDETDESAVRAAKQEMLSPQL 557

Query: 451 LNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHR 510
           LNNIG  +F       A + F+ AL   + +   D    T  +                 
Sbjct: 558 LNNIGSFYFHADRLSQAREYFQYALRSSVSINAKDESVDTDAL----------------- 600

Query: 511 FENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAK 570
                          T+ +NLAR  E       A  +Y+ +L ++ DY+DA  R+A +A 
Sbjct: 601 -------------VTTISYNLARTYEAEGVEDEAENIYKKLLERHPDYIDANSRMAYLA- 646

Query: 571 ARNNLQLSIELVNEALKVNGKYPNALSMLG---------DLELKNDDWVKAKETFRAASD 621
            RN+     E + E ++ +       ++ G          L L  D   + ++ ++    
Sbjct: 647 LRNDPAKGAEAIKELMEADPANLEVRALYGWYINKHKKRTLALNED---QEQKHYKHTLM 703

Query: 622 ATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLE-------KAKELYTRVIVQHTSN 674
             D  D Y+   +GN +   A    +  P+    H E       +A E + +V+     N
Sbjct: 704 TYDKHDIYSLTGMGNLHLTVA----REMPRDTDVHKERRSKTYARAVEFFDKVLTLDPKN 759

Query: 675 LYAANGAGVVLA-EKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALA 733
            +AA G G+ +  EK        +F++V+E+      V+   V INL HVY     F+ +
Sbjct: 760 AFAAQGLGIAMVEEKKDTSAGISVFSKVRES------VKDASVHINLGHVYCELKQFSRS 813

Query: 734 MKMYQNCLRKFYYNTDAQILLYLART---HYEAEQWQDCKKSLL----RAIHLAPSNYTL 786
           ++ Y+  L K   + D QI+  L R       AE+  D  K+ L    +A+  AP N   
Sbjct: 814 IENYELALAK-SRDKDPQIMACLGRAWLMRGRAEKSLDALKTSLYISQQALEKAPDNINF 872

Query: 787 RFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGFDEKKIN 846
           +F+      + +   + +      E   T+A++E A +    L AA    +  F E   +
Sbjct: 873 KFNVAFVQIQIAQQMIMQP-----EANKTLADVEIASK---GLDAA----IESFGEIAKS 920

Query: 847 THVEYCKHLLDAAKIHREAAEREEQQNRQRQEAARQAALAEEARRKAEEQKKY 899
            +  + +H +            E++ N  R    RQ A A E  ++AE +KK+
Sbjct: 921 PNTPFPRHDI------------EQRANMGRNTMKRQLATAIE--KQAEYEKKH 959


>gi|157812818|gb|ABV81154.1| putative CG2469-like protein [Cydia pomonella]
          Length = 173

 Score =  145 bits (366), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 74/173 (42%), Positives = 107/173 (61%)

Query: 147 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 206
           A + F  VL    +NVP+LLG+AC+ FNR  Y  +L FYK+AL+ +P  P A+RLG+G C
Sbjct: 1   ADAQFNFVLNQSPNNVPSLLGKACIAFNRKDYRGALAFYKKALRTNPDSPAALRLGMGHC 60

Query: 207 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY 266
             KL    KAR AF+RALQLDP+ V ALV L+++ L   E    +  +  + +A+ I P 
Sbjct: 61  FMKLNNQEKARMAFERALQLDPQCVGALVGLSILKLNLQENESNKMAVIMLSKAYAIDPK 120

Query: 267 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 319
             M LN+LANHFFF   +  V+ L   A   T +   ++ S ++LAR++H++G
Sbjct: 121 NPMVLNHLANHFFFKKDYSKVQHLALHAFHNTENEAMRAESCHHLARAFHAQG 173



 Score = 42.4 bits (98), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 56/112 (50%), Gaps = 6/112 (5%)

Query: 357 DFRSALTNFEKVLEIYPDNCETLK-ALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFID 415
           D+R AL  ++K L   PD+   L+  +GH +++L   EKA+    +A ++DP+   A + 
Sbjct: 31  DYRGALAFYKKALRTNPDSPAALRLGMGHCFMKLNNQEKARMAFERALQLDPQCVGALVG 90

Query: 416 LGELLISSDTGAALDAFKTARTLLKKAGEEVPIE--VLNNIGVIHFEKGEFE 465
           L  L ++       ++ K A  +L KA    P    VLN++    F K ++ 
Sbjct: 91  LSILKLNLQEN---ESNKMAVIMLSKAYAIDPKNPMVLNHLANHFFFKKDYS 139


>gi|157939593|gb|ABW05521.1| SH2 domain binding protein [Forficula auricularia]
          Length = 177

 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 71/177 (40%), Positives = 108/177 (61%)

Query: 147 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 206
           A + F  VL    +N+P+L G+AC+ FN+  Y  +L FYK+AL+ +P+CP A+RLG+G C
Sbjct: 1   ADAQFNFVLNQSPNNIPSLXGKACIAFNKKDYXGALAFYKKALRTNPNCPAAVRLGMGHC 60

Query: 207 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY 266
               G   KA  AF+RAL LD + V ALV L+++ L   E+  I+ G++ + +A+ I   
Sbjct: 61  FXXXGNQEKAXXAFERALSLDSQCVGALVGLSILKLNQXESDSIKTGVQMLSKAYTIDST 120

Query: 267 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEK 323
             M LN+LANHFFF   +  V+ L   A   T +   ++ S Y LAR++H + DY++
Sbjct: 121 NPMVLNHLANHFFFKKDYNKVQHLXLHAFHNTENEXMRAESCYXLARAFHVQEDYDQ 177


>gi|146416301|ref|XP_001484120.1| hypothetical protein PGUG_03501 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 1074

 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 225/993 (22%), Positives = 429/993 (43%), Gaps = 143/993 (14%)

Query: 19  LDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQILEEGSSPEIDEYYADV 78
           +++LP D ++++  L  E+     W+ +AR Y   GK+++  ++L + S   +   ++D 
Sbjct: 37  VEELPDDPNELISFLNEEKCDRKYWISVARAYSASGKLDEATEVLSQASKQPL---FSDA 93

Query: 79  RYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLL 138
             +R++I ++    +    K  ++   + EH   A +   +  +    + +  + K    
Sbjct: 94  --DRLSIDSSFKWLHL---KYVSQGINRAEHLSAANELIERDFKSAPSDVNNLLAKATYY 148

Query: 139 LAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGR-YSDSLEFYKRALQVHPSCPG 197
             +   +QA   +  + +AD  N  ALLG+A +  N+ + Y   L  Y++ L ++P    
Sbjct: 149 GLEDMADQAWEIYDGIWKADPKNCFALLGKAHIALNKTKNYKSGLRLYQQVLLLNPIMKP 208

Query: 198 AIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEA--LVALAVMDLQANEA-------A 248
             R+GIG+C + L     A  +++RAL++D  N  A  L+ L+  +   N++        
Sbjct: 209 DPRIGIGICAWMLNDQEMAVNSWKRALEIDSLNTAAKLLITLSQFNDAFNKSLSDESFIT 268

Query: 249 GIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHS- 307
             ++ + K++    +     + L +++ +++   Q+ +VE++    L   + G +K HS 
Sbjct: 269 SYKECLIKLRDLPHLSEDTTILLAFVS-YYYSKEQYDIVEKICNNILQKYS-GSSKVHSS 326

Query: 308 ----YYN---------LARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLK 354
               Y +         L R   +KGDY ++   +  +++  +     +    GLG  Q  
Sbjct: 327 KLTPYQSKALSTANSWLGRVSFAKGDYTQSQRSFHEAIRLDDNN---LIAKLGLGLSQAN 383

Query: 355 LGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQEL--------LRKAAKID 406
            G    A+  FE VL+  P   E   +LG  Y +L +  K Q+L        LR +  + 
Sbjct: 384 RGSNEEAIITFESVLKTNPKCLEVNYSLGIFYSKL-KSRKKQDLAILILERYLRLSNNLG 442

Query: 407 PRDAQAFIDLGELLISSDTGAALDAFKT------------ARTLLKKA-------GEEVP 447
                +  D  E  +SS     L+A  T            + T L KA       G  VP
Sbjct: 443 LNPTASKKDDDESSLSSKEPIVLNALLTLSRLYEGRDLNQSLTYLSKAIESRTQVGLSVP 502

Query: 448 IEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQL 507
           IEV NN+GV++F K   + A ++F+ A+ +       +S+ K+  I        F D+ L
Sbjct: 503 IEVYNNLGVMNFFKNNLDEAKENFEFAVQN----IRKESEEKSDPI--------FDDLSL 550

Query: 508 FHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAA 567
                             T+ +NLAR  +++ D  AA  +Y+ +  +  +Y  A LRL  
Sbjct: 551 ------------------TIDYNLAR-SQEVSDEKAAISIYKSVTERSSNYFSASLRLLF 591

Query: 568 IAKARNNLQLSIELVNEALKVNGKYPNALSMLG-----------DLELKND-DWVKAKET 615
           +     N     ++     ++  + P  L +              + +K D D    K+T
Sbjct: 592 LDCVSTNESTKEQIRERIEELLEENPANLEIRSFYGWFAKTFGKRIGMKQDADTEHQKKT 651

Query: 616 FRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEK----AKELYTRVIVQH 671
                   D  DSYA LSL N  Y    R+ K +    A   +K    A EL+T+VI   
Sbjct: 652 LV----EYDSHDSYALLSLANI-YCIMARDVKGSGSAVAEKRKKYYIRAIELFTKVISVD 706

Query: 672 TSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFA 731
           + N+YAA G  +V  E        ++  +++++      +    V++NL HV      F+
Sbjct: 707 SKNVYAAQGLAIVYIENKDSQKGLEILRKIRDS------LNDISVYLNLGHVLLELKQFS 760

Query: 732 LAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPS--------N 783
            +++ Y+  L +F   TD++IL +L R  Y     +     L +A+  A           
Sbjct: 761 KSIENYEIALVRFTSGTDSKILSFLGRAWYMRGLAEKDLFYLKKALDYAQEAQKQSGGLQ 820

Query: 784 YTLRFDAGVAMQKFS----ASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHG 839
            +LRF+  +A  +F      + +   +R  D+++  +  L  A+   + L++    H   
Sbjct: 821 ASLRFN--IAYVQFQIAEFITKIAVEQRNVDDIKRAIEGLNEAIETLNSLASDDEAH-PP 877

Query: 840 FDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEAARQAAL-AEEARRKAEEQKK 898
           + + ++ +        L A +++    E EE  N+   + A    L  EEA ++ EE++ 
Sbjct: 878 YPKLELKSRANLGTTTL-ANRLNTCLEETEEYINKVENKLAEAKRLRQEEAAKRLEEEQN 936

Query: 899 YLLEKRKLEDE--QKRLRQQEEHFQRV-KARIF 928
            +L +++ E+E  ++R + QE+  Q V ++R F
Sbjct: 937 RILRQKQAEEELAKERAKLQEQAQQWVEESRAF 969


>gi|262302913|gb|ACY44049.1| SH2 domain binding protein [Eumesocampa frigilis]
          Length = 173

 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 71/172 (41%), Positives = 105/172 (61%)

Query: 153 IVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQ 212
            VL    +N+P+LLG+AC+ FN+  +  +L FYK+AL+ +P+CP  +R+G+G C  KL  
Sbjct: 2   FVLNGAPNNIPSLLGKACIAFNKKDHRGALAFYKKALRTNPNCPAVVRVGMGHCFMKLAN 61

Query: 213 LGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALN 272
             KA  AF RAL LDP+ V AL  LA++ L   E   IR G+  + +A+ I     M LN
Sbjct: 62  QEKAWLAFSRALDLDPQCVGALTGLAILKLNHQENDSIRDGVHMLSKAYAIDSSNPMVLN 121

Query: 273 YLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 324
           +LANHFFF   +  V+ L   A + T +   ++ S Y LAR++H +GD ++A
Sbjct: 122 HLANHFFFKKDYHKVQHLALHAFSNTENEAMRAESCYQLARAFHVQGDLDQA 173


>gi|299752145|ref|XP_001830731.2| pol II transcription elongation factor [Coprinopsis cinerea
           okayama7#130]
 gi|298409698|gb|EAU91100.2| pol II transcription elongation factor [Coprinopsis cinerea
           okayama7#130]
          Length = 1053

 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 188/888 (21%), Positives = 370/888 (41%), Gaps = 155/888 (17%)

Query: 10  NSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQIL------ 63
             +E + + LD L  + +D+LD+LK  Q  + +W  +A EYF++G +    QI       
Sbjct: 15  GGQEVITIELDGLDENTTDVLDLLKEGQCKVWIWTKLAAEYFRRGWLSCAEQIALAAVET 74

Query: 64  --EEGSSPEIDEYYA---DVRYERIAILNALGVYYTYLGKI-ETKQREKEEHFILATQYY 117
               G+   +   YA   +++  +      L +    L ++ E ++ EK +    A++Y 
Sbjct: 75  LQANGTGSTLAPIYALLANLQLAKGRDAPMLVLEDAQLDRLPEAEKTEKIKFTEEASKYL 134

Query: 118 NKASRIDMHEPS--------TWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQA 169
           NK+ +     P          ++ +G   LA+   ++A  +F+ VL     N+  +L   
Sbjct: 135 NKSQQSLAENPEDDSMGIALPYLSRGIQQLAQQSFDEALRSFEGVLSQSPTNIARVL--- 191

Query: 170 CVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPE 229
              F +  Y ++L  Y+  L+  P+C    R+GIG+C + LG   KA+QA+QR+L+++P 
Sbjct: 192 ---FQKKFYKEALRLYQDVLRYKPNCKPDPRVGIGMCLWALGHKEKAKQAWQRSLEVNPG 248

Query: 230 NVEALVALAVMDLQANEAAGIRK---------GMEKMQRAFEIYPYCAMALNYLANHFFF 280
             +  + L +  + A+++  I +         G E + R F +    A A N +      
Sbjct: 249 GWQVQLLLGIESINASKSQAISEEAKTQAFLSGTEMVGRTFRMNSKNASAANAMCEIMIR 308

Query: 281 TGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPH- 339
            G++    +L E  +   +     +  Y   AR+ H++G+ ++A  +Y   + ++     
Sbjct: 309 KGKYQQAMKLAERTIQFADTRTLLAEGYLRAARAAHAQGNLQQARQFYATVLNKLGDTQK 368

Query: 340 ---EFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDN---------CETLKALGHIYV 387
              +      G+ Q+Q+   +  +A+   + +++  P+            +L+A     V
Sbjct: 369 DRSQLTIASIGMAQLQMHYDEAAAAIHTLDTLIQ-QPNTQRSPEAIVMLASLRACPRPGV 427

Query: 388 QLGQI--EKAQ--ELLRKAAK---ID-------------PRDAQAFIDLGELLISSDTGA 427
              ++  EKAQ  +L  +A K   ID               D    +++  L    +T  
Sbjct: 428 SSSEVAQEKAQARDLFDRALKGLEIDGARHGPSKASLNITDDLDMHLEIARLWQGENTER 487

Query: 428 ALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSK 487
              A+K A  + +  G+  P  ++NN+GV+   +G    A   ++ A      LT +  +
Sbjct: 488 VYKAYKEAMRISETFGDVDP-RLVNNLGVLEHLEGRLSEARTLYESA------LTKVAGQ 540

Query: 488 TKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVL 547
            K    D + S                           ++LFNLAR+ E   D   A   
Sbjct: 541 GKG---DEAMS--------------------------TSMLFNLARVYEDEGDVTLAKEA 571

Query: 548 YRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDL----- 602
           Y  +L ++ +Y+DA +R + +  + N    + +L+ + L     +P+ L++         
Sbjct: 572 YDKLLSRHPEYIDAKIRQSQMLLSVNKFAEANDLLKQCLSA---HPSNLNLRAAYLHFLM 628

Query: 603 -ELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPK--LEATH--L 657
             ++  D+   KE   +     D  D Y +L    W +F   R  +   +  LE      
Sbjct: 629 QTIRIGDYKSFKEFVFSTLKDHDKHDVY-SLCAAAWLHFFQARESRDVSQKGLEERRKAF 687

Query: 658 EKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDV---------------------SKD 696
           ++A E Y + +       YAA G  +++AE    ++                     + D
Sbjct: 688 QRAAEYYEKALQLDPQCAYAAQGLAIIIAEDALGNLYGAMGSAAPDDHQRRLINVREALD 747

Query: 697 LFTQVQEAAS-GSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLY 755
           +F +V+E+ + GSV+        N+ H Y+++  F  A++ Y+    +FY N +  +L+ 
Sbjct: 748 IFAKVRESINDGSVYT-------NMGHCYYSRDEFDRAIESYETASGRFYQNQNYSVLMC 800

Query: 756 LARTHYE---AEQWQDCKKSLLR----AIHLAPSNYTLRFDAGVAMQK 796
           L R+ Y     +Q      + LR    A+H+ P++    ++  +  QK
Sbjct: 801 LCRSWYSKAIKDQSPMAMNTALRYAQSALHILPNDKVALYNIAMIQQK 848


>gi|403218134|emb|CCK72626.1| hypothetical protein KNAG_0K02630 [Kazachstania naganishii CBS
           8797]
          Length = 1076

 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 255/1027 (24%), Positives = 425/1027 (41%), Gaps = 191/1027 (18%)

Query: 6   IPVQNSEEEVRVALD-QLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQ----FR 60
           IP++ SEE V + L+  LP D +D+  +L  E +  + WL IA  Y  QGK++      R
Sbjct: 30  IPLKASEELVSIDLETDLPDDPADLRTLLVEESSDKEHWLTIAIAYCNQGKIQDGIALIR 89

Query: 61  QILE--EGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQRE-KEEHFILATQYY 117
             LE   G+             ER ++   L   +  L K +T     +E+  + A    
Sbjct: 90  MALEVFHGA-------------ERASLHTLLSWAHLTLAKKDTTDPHLREQCLVNAENDL 136

Query: 118 NKASRIDMHEPSTWVGKG----QLLLAKGEVEQA---SSAFKIVLEAD--------RDNV 162
             A   D     TWVG       L   +G  ++A   S  F   + A+        + N 
Sbjct: 137 KDAIGFD----PTWVGNMLATVDLYYQRGHYDKALETSDLFVKSIHAEERRAGKQPKINC 192

Query: 163 PALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQR 222
             LL +A + + +  Y  SL+ ++  L  +P      R+GIGLC ++L     A  A++R
Sbjct: 193 LFLLMRAKLLYQKKNYMASLKSFQELLVTNPVLKPDPRIGIGLCFWQLKDYQMAISAWER 252

Query: 223 ALQLDPENVEALVALAV-----------MDLQANEAAGIRKGMEKMQRAFEIYPYCAMAL 271
           AL+LDPEN  A +   +            D Q  E+    K + ++   +       + L
Sbjct: 253 ALELDPENKTASILCLLGKFHNSITDSKNDTQFTES--FTKVLTELNDIYTNNKENPVLL 310

Query: 272 NYLANHFFFTGQHFLVEQLTETALAVTNH--GPT-KSHSYYNLARSYHSKGDYEKAGLYY 328
             L ++++FTG +  V ++ E  ++       PT  S S +   R+ ++  +Y +A + +
Sbjct: 311 ILLQSYYYFTGDYSRVIKIYEAKISPNASLITPTLMSDSTFWCGRAQYALNNYREAFVMF 370

Query: 329 MASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQ 388
             S+K      + +   +G+GQ Q+K      ++  FE + +   +  E    LG +Y +
Sbjct: 371 QESLK---TNEDNLLARFGVGQSQIKTNLVEESILTFENLYKTNENIQELNYVLGLLYAE 427

Query: 389 -----------LGQ-----IEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAF 432
                       G+     I KA + L K   +        I     L+ S+     + +
Sbjct: 428 KCLNTRSRKKLSGKDSNFLITKALQYLEKYINLTTAKKNQLIIKRAYLVMSELYELQNQY 487

Query: 433 KTARTLLKKAGEE--------VPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLL 484
           K +  LL KA EE        VP EV NN+G  HF  G+   A + F             
Sbjct: 488 KKSLELLSKAAEELQLIDDGHVPPEVFNNLGFFHFINGDHAKAMEYF------------- 534

Query: 485 DSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVA- 543
             KTK  V        + KD  L                ++T+ FN+ R LE   D V  
Sbjct: 535 -DKTKKLVT-------ELKDKSL----------------ELTIDFNIGRTLE--GDQVGE 568

Query: 544 ASVLYRLILFKYQDYVDAYLR--LAAIAKARNNLQLSIEL------VNEALKVNGKYPNA 595
           A  +Y+ IL ++  YV A +R     I        L+ +L       ++ L+V   Y   
Sbjct: 569 AQDIYKGILTEHPAYVAARIRSLFCQILNREKTTTLAHDLKQLLHDFSDDLEVRAFYS-- 626

Query: 596 LSMLGDLELKNDDWVK---AKETFRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKL 652
              L + ++K+ D ++   +KET        D  D YA +SL N     A   +K +   
Sbjct: 627 -WYLKNCDIKDSDALETAHSKETLVKY----DSHDLYALISLANLYCVIAKEAKKSSSSK 681

Query: 653 EATHLE----KAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGS 708
           E    +    KA +LY +V+     N++AA G  +V AE  +   + ++F +V+++    
Sbjct: 682 EQEKSKHSYLKATQLYQKVLQIDPLNVFAAQGIAIVFAESKRLGPALEIFRKVRDS---- 737

Query: 709 VFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKF--YYNTDAQILLYLARTHYEAEQW 766
             +   DV IN+AH      ++  A + Y+  L+KF       A IL  L +  Y     
Sbjct: 738 --IHNVDVHINIAHCLLEMNDYVKAAENYEIILKKFDKEIPNRAYILNLLGKVWY----L 791

Query: 767 QDCK-------KSLLRAIHLA--------PSN--YTLRFDAGVAMQKFSA-STLQKT--- 805
           + CK       +  L  I LA        P N  +  R    + + +F    TL+++   
Sbjct: 792 RGCKERNVGFLQKSLGNIKLAIEDESCKTPLNGKFLNRLQFNLTLLQFQILETLRRSAAK 851

Query: 806 RRTADEVRSTVAELENAVRVFSHLSAASNLHLHGFD--EKKINTHVEYCKHLLDAAKIHR 863
            RT  +++S   EL +AV V  HL  A +  +   +  E++I       +  LD     +
Sbjct: 852 NRTLADLKSASEELTHAVSVLKHLRDADDFKIVSQEELEQRIQLAETTMRTSLDRCITEQ 911

Query: 864 EAAEREEQQNRQRQEAARQAALAEEARR--KAEEQKKYLL-------EKRKLEDEQKRLR 914
           EA ERE  QN +  EA +   + E+  R  +A+E  + L        E ++L+DE ++L 
Sbjct: 912 EAFERE--QNSKLDEARKILEMKEQQERETRAKEDMEKLTKLARQKEEYQRLQDEAQKLI 969

Query: 915 QQEEHFQ 921
           Q+ E F+
Sbjct: 970 QERETFE 976


>gi|406605310|emb|CCH43266.1| RNA polymerase-associated protein CTR9 [Wickerhamomyces ciferrii]
          Length = 1093

 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 134/510 (26%), Positives = 239/510 (46%), Gaps = 60/510 (11%)

Query: 2   ACVYIPVQNSEEEVRVALDQ-LPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFR 60
           + V +P+ +S E V + L++ LP D +D+  +L+ E A    WL+IA  Y  +  V +  
Sbjct: 25  STVEVPMNDSNEVVTIDLEEELPEDPTDLCTLLENEHAAPHYWLLIAAVYANKSLVNEAM 84

Query: 61  QILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKA 120
           +++  G +      Y +              ++T+L  +  +Q +         Q+  KA
Sbjct: 85  EVITTGLN-----LYQNSES---------APFHTFLSWLNLRQSKSSIESSEDNQFLKKA 130

Query: 121 S---RIDMHEPSTWV----GKGQLLLAKGEVEQASSAFKIVLEAD---RDNVPALLGQAC 170
           +   +I +     ++     + ++   +G+ +QA   F+ +L+ D     NV ALLG+A 
Sbjct: 131 ADSLKIALQYQPHYILNRLARAEITYQQGQYDQALDYFERILKLDVKSDSNVYALLGKAK 190

Query: 171 VEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPEN 230
             +N+  Y  SL+ +++ L ++P      R+GIGL  + L     A +A++R+L++DPEN
Sbjct: 191 TLYNKKNYQTSLKTFQQILILNPLLKPDPRIGIGLNFWNLKDKKMATKAWERSLEIDPEN 250

Query: 231 VEA--LVALAVMDLQANE------AAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTG 282
             A  L+ L+  D   +        +   K +E +Q   +  P   + L  LA++++   
Sbjct: 251 EVAKLLIVLSKFDSSFDSLTDDDFISTYTKALESLQTLIKTTPENPVLLLLLASYYYSKN 310

Query: 283 QHFLVEQLTETALAVTNHGPT-KSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEF 341
               V ++ E  L   N      S + + +AR +  + D+  +  ++  S+K +N  +  
Sbjct: 311 DLDSVLKICEKVLQKGNLSSNLSSDANFWIARVHFEREDFSNSTKFFAESLK-LNSDN-- 367

Query: 342 IFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKA---LGHIYVQ--------LG 390
           +    G+GQ Q++ G    ++  FE    IY +N + L+    LG +Y Q        + 
Sbjct: 368 LLAKLGVGQSQIQRGSIEDSIITFES---IYNNNQKILEIDYILGILYAQDEKNHQKAIA 424

Query: 391 QIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEV 450
            +EK   L +   K +P     ++ L +L  + D   AL     A  +LKK GE +PIEV
Sbjct: 425 ALEKYIRLSKD--KNEPIALNTYLTLSKLFENKDNSLALSHLSKALDVLKKRGETIPIEV 482

Query: 451 LNNIGVIHFEKGE-------FESAHQSFKD 473
           LNN+GV HF KG        FESAHQ+  D
Sbjct: 483 LNNLGVFHFIKGNPESANTFFESAHQANTD 512



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 39/159 (24%), Positives = 78/159 (49%), Gaps = 10/159 (6%)

Query: 624 DGKDSYATLSLGNWNYFAALRNEKRAPK-LEATHLE--KAKELYTRVIVQHTSNLYAANG 680
           D  D+YA +SLGN     A   + + P+ LE  +    +  +L+ +V+    +N++AA G
Sbjct: 624 DSHDTYALISLGNLYCSIAREVKGKTPQDLEKKNQSYVRGAQLFQKVLTIDPNNVFAAQG 683

Query: 681 AGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNC 740
             ++  E     V+ + F ++++A      +    V+INL H     G F+ A++ Y+  
Sbjct: 684 IAIIFVENKHSTVALETFRKIRDA------IDDVSVYINLGHCLIEVGQFSKAIESYEIA 737

Query: 741 LRKFYYNT-DAQILLYLARTHYEAEQWQDCKKSLLRAIH 778
           LR++   T D++ L  + R  +     +   +S L+++ 
Sbjct: 738 LRRYGDETKDSRYLTLVGRAWFARASAEKSLESYLKSLE 776


>gi|157812820|gb|ABV81155.1| putative CG2469-like protein [Prodoxus quinquepunctellus]
          Length = 173

 Score =  142 bits (359), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 72/173 (41%), Positives = 106/173 (61%)

Query: 147 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 206
           A + F  VL    +NVP+LLG+AC+ FNR  +  +L FYK+AL+ +P  P  +RLG+G C
Sbjct: 1   ADAQFNFVLNQSPNNVPSLLGKACIAFNRKDFRGALAFYKKALRTNPDSPAVLRLGMGHC 60

Query: 207 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY 266
             KL    KAR AF+RALQLDP+ V ALV L+++ L   E    +  +  + +A+ I P 
Sbjct: 61  FMKLNNQEKARMAFERALQLDPQCVGALVGLSILKLNLQENESNKMAVIMLSKAYAIDPK 120

Query: 267 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 319
             M LN+LANHFFF   +  V+ L   A   T +   ++ S ++LAR++H++G
Sbjct: 121 NPMVLNHLANHFFFKKDYNKVQHLALHAFHNTENEAMRAESCHHLARAFHAQG 173



 Score = 43.9 bits (102), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 56/112 (50%), Gaps = 6/112 (5%)

Query: 357 DFRSALTNFEKVLEIYPDNCETLK-ALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFID 415
           DFR AL  ++K L   PD+   L+  +GH +++L   EKA+    +A ++DP+   A + 
Sbjct: 31  DFRGALAFYKKALRTNPDSPAVLRLGMGHCFMKLNNQEKARMAFERALQLDPQCVGALVG 90

Query: 416 LGELLISSDTGAALDAFKTARTLLKKAGEEVPIE--VLNNIGVIHFEKGEFE 465
           L  L ++       ++ K A  +L KA    P    VLN++    F K ++ 
Sbjct: 91  LSILKLNLQEN---ESNKMAVIMLSKAYAIDPKNPMVLNHLANHFFFKKDYN 139


>gi|262302927|gb|ACY44056.1| SH2 domain binding protein [Ischnura verticalis]
          Length = 174

 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 74/174 (42%), Positives = 104/174 (59%), Gaps = 1/174 (0%)

Query: 147 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS-CPGAIRLGIGL 205
           A + F  VL     +VPALLG+AC+ F R  +  +L FYK+AL+  P+ CP  +RLG+G 
Sbjct: 1   ADAQFNFVLNQSPGSVPALLGKACIAFGRKDFRGALAFYKKALRTSPAACPATVRLGMGH 60

Query: 206 CRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYP 265
           C  KLG   KAR AF+RAL+LD   V ALV LA++ L   E   I+ G++ + +A+ I  
Sbjct: 61  CFMKLGNQDKARLAFERALELDSSCVGALVGLAILQLNQQETESIKSGVQMLSKAYTIDS 120

Query: 266 YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 319
              M LN+LANHFFF   +  V+ L   A   T +   ++ S Y LAR++H +G
Sbjct: 121 TNPMVLNHLANHFFFKKDYHKVQHLALHAFHNTENEAMRAESCYQLARAFHVQG 174


>gi|262302917|gb|ACY44051.1| SH2 domain binding protein [Eurypauropus spinosus]
          Length = 178

 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 71/178 (39%), Positives = 107/178 (60%)

Query: 147 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 206
           A + F  VL    +N+ +LLG+AC+ F++  +  +L +YK+AL+ +P CP  +RLG+G C
Sbjct: 1   ADAQFNFVLNQSPNNIASLLGKACIAFSKKDFRGALAYYKKALRTNPKCPAEVRLGMGHC 60

Query: 207 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY 266
             KL +  KAR AF RALQLD   V ALV L++ +L       IR G++ + RA+ I   
Sbjct: 61  FMKLNKPDKARLAFDRALQLDANCVGALVGLSMSELNKKTPDSIRSGVQMLSRAYTIDST 120

Query: 267 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 324
             M LN+LANHFFF   +  V+ L   A   T +   ++ S Y +AR++H + DY++A
Sbjct: 121 NPMVLNHLANHFFFKKDYSKVQHLALHAFHNTENEAMRAESCYQMARAFHVQEDYDQA 178


>gi|262302901|gb|ACY44043.1| SH2 domain binding protein [Carcinoscorpius rotundicauda]
          Length = 149

 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 68/146 (46%), Positives = 95/146 (65%)

Query: 153 IVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQ 212
            VL    +N+P+LLG+AC+ FN+  +  +L FYK+AL+  P CP A+RLG+G C YKLG+
Sbjct: 1   FVLNQSPNNIPSLLGKACIAFNKKDFRGALAFYKKALRTSPKCPAAVRLGMGHCFYKLGK 60

Query: 213 LGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALN 272
             KA+ AF+RALQLDP+ V ALV LAV++L    +  IR G++ + +A+ I     M LN
Sbjct: 61  HEKAKLAFERALQLDPQCVGALVGLAVLELNLKSSESIRNGVQMLSKAYRIDSTNPMVLN 120

Query: 273 YLANHFFFTGQHFLVEQLTETALAVT 298
           +LANHFFF   +  V+ L   A   T
Sbjct: 121 HLANHFFFKKDYGKVQHLALHAFHNT 146


>gi|402225916|gb|EJU05976.1| TPR-like protein [Dacryopinax sp. DJM-731 SS1]
          Length = 1133

 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 209/893 (23%), Positives = 378/893 (42%), Gaps = 178/893 (19%)

Query: 98  KIETKQREKEEHFILATQYYNKAS----RIDMHEPSTWV----GKGQLLLAKGEVEQASS 149
           K+++K +EK       + Y N+A+    R+D   P   V     K    LA+  ++ A  
Sbjct: 112 KLDSKVQEK-------SVYINEAATSMARMDSVVPKLSVVQLLSKAVSQLAENAIDAAGR 164

Query: 150 AFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYK 209
            F  +L+  ++N  AL+G+  +++ R  Y D+L+ ++ AL+  P      R+GIGLC + 
Sbjct: 165 TFDEILQQQQNNSVALMGKGRIQYARRNYRDALKSFQEALKYAPDLLPDPRVGIGLCAWS 224

Query: 210 LGQLGKARQAFQRALQLDPE--NVEALVALAVMDLQANEAAGIRKGMEKMQRAF------ 261
           LG   +AR+A+QR+L++ P+    + L+ L+++    N+A   R+   +  RA+      
Sbjct: 225 LGDQDRARRAWQRSLEVHPDLPAPQILICLSLL----NDAKDKRRDQRERSRAYSQGIKG 280

Query: 262 ------EIYPYCAMALNYLANHFF-------FTGQHFLVEQLTETALAVTNHGPT----- 303
                 +   +CA+  + L+ +F           Q+ L+  LT    AV     T     
Sbjct: 281 LAALFRDRGKHCAIVADALSAYFMERKEWDKVRAQYDLIHLLTSVFQAVKAAERTIQFAD 340

Query: 304 ----KSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFR 359
                S  Y  L R  H +GD  +A   Y  SV    K         GLGQV +   +  
Sbjct: 341 LRSVVSDGYMRLGRIAHLRGDLPQAVEQYGISVDRNEKNQ---LARTGLGQVHILTNEIP 397

Query: 360 SALTNFEKVLEIYPDNCETLKALGHIYVQL-----------GQIEKAQELLRKAAKI--- 405
           +A+ ++E +L    +  E L  L  +               G++ +A++L  +AA+I   
Sbjct: 398 AAIHDYELLLSDNQNLIEALLPLASLQASAWPGASPVEQDAGKV-RARQLYDRAARIIKG 456

Query: 406 ------DPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEE---VPIEVLNNIGV 456
                    D + ++++ +L  + D+  A +A+  A  L ++  +    V  ++LN + V
Sbjct: 457 KEVETEGMEDPELWVEVAKLWQAEDSNKAREAYARAVELARETADPEKGVDPKLLNALAV 516

Query: 457 I-HFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDG 515
           I H   GE  +     +D     ++   L   TK                        +G
Sbjct: 517 IRHIHGGE--TGRTEARD-----LYQEALVGATKA----------------------EEG 547

Query: 516 NHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNL 575
              E+   +   L+NLAR  E + +   A   Y+ +L ++ +YVDA  RLA + + +  +
Sbjct: 548 PENEMV--QTATLYNLARCWEALGEQTQAQEAYQKLLSRHPEYVDAKARLAHVYQQQGRI 605

Query: 576 QLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLG 635
             +  L+ +AL+         S   +L+L++         F A+   +     +A L+L 
Sbjct: 606 DEAHGLLKDALE---------SQTDNLDLRS-----YYTYFLASHKQSRQSSKFAQLTLS 651

Query: 636 NWN--------------YFAALRNE---KRAPKLEATHLEKAKELYTRVIVQHTSNLYAA 678
           N++              Y AA  N      A K+   H +   + Y +V+    +  YAA
Sbjct: 652 NYDKHDVYALSAVAADLYSAARENRDTGSEAIKVRRKHFQNCAQAYDKVLSLDPNCAYAA 711

Query: 679 NGAGVVLAEKG----------QFDVSKD----------LFTQVQEAA-SGSVFVQMPDVW 717
            G  +++AE              D +++          +F +V+E+  +GSVFV      
Sbjct: 712 MGLAIMIAEDALGGLAGAPVPGADEARERERNAAEALGVFGRVRESINNGSVFV------ 765

Query: 718 INLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEA---EQWQDCKKSLL 774
            N+ H Y+    F  A++ Y+   R FY   D  +LL+L R  Y     EQ ++  ++ L
Sbjct: 766 -NMGHCYYTLEQFQKAIESYELASR-FYNGKDFAVLLHLCRAWYAKANLEQNREGMETAL 823

Query: 775 ----RAIHLAPSNYTLRFDAGVAMQKFSAS--TLQKTRRTADEVRSTVAELENAVRVFSH 828
               +A+ LAP +    +D  V  QKF+    +L   RRT ++++  + + + A   F+ 
Sbjct: 824 DYAKKALALAPEDKATVYDIAVIQQKFAELLFSLPPDRRTLEKLQEAIDQAQEAQGTFAA 883

Query: 829 LSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEAAR 881
           L    +  +  F     +    Y + +L  +  H EA +  EQ+   + EAAR
Sbjct: 884 LVEDKST-VMPFARDLPDQRRRYGETVLRKSGEHVEAQKAYEQEVVAKTEAAR 935


>gi|367008134|ref|XP_003678567.1| hypothetical protein TDEL_0A00240 [Torulaspora delbrueckii]
 gi|359746224|emb|CCE89356.1| hypothetical protein TDEL_0A00240 [Torulaspora delbrueckii]
          Length = 1059

 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 234/1010 (23%), Positives = 418/1010 (41%), Gaps = 167/1010 (16%)

Query: 6   IPVQNSEEEVRVALD-QLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQILE 64
           IP++ SEE V + L+  LP D +D+  +L  E +  + WL IA  Y   GK  +  +++E
Sbjct: 21  IPLKASEEVVSIDLETDLPDDPADLKTLLVEEGSDKEHWLTIAIAYCNHGKTAEGIRLIE 80

Query: 65  EGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQRE-KEEHFILATQYYNKASRI 123
                   E +     E  A+   L   +  + K      E KE   + A  +   A   
Sbjct: 81  MAL-----ESFGTT--ENAALHTFLTWGHLKMAKEHPYDAEVKERELVEAEVHLKSAIGF 133

Query: 124 DMHEPSTWVGKG----QLLLAKGEVEQASSAFKIVLEA-----------DRDNVPALLGQ 168
           D     TWVG       L   +G  ++A    ++ +++            + N   L  +
Sbjct: 134 D----PTWVGNMLATIDLYYQRGHYDRALETCELFVKSIYAEDSRNGKTSKQNAFFLFLR 189

Query: 169 ACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDP 228
           A + + +  Y+ SL  ++  L ++P      R+GIGLC ++L     A  +++RA +L+P
Sbjct: 190 AKLLYQKKNYAASLRSFQELLVINPVIQPDPRIGIGLCFWQLKDYKIAIASWKRAHELNP 249

Query: 229 ENVEALVALAVMD----LQANEAAGI-----RKGMEKMQRAFEIYPYCAMALNYLANHFF 279
            N  A + + + D    L  +E   +      K ++ +   F       + L  L  +F+
Sbjct: 250 NNQSAAILVLLGDFHESLVTSENDTVFQETYSKVLQNLNGLFSEDRENPVLLTLLEVYFY 309

Query: 280 FTGQHFLVEQLTET---ALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEIN 336
             G +  V  + E+    ++ T      S S +   R+Y++  DY KA   +  S+K+  
Sbjct: 310 LKGDYNKVIDIYESKIKGISTTVTSTVLSESLFWCGRAYYALEDYRKAFTMFQQSLKQ-- 367

Query: 337 KPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQ-------- 388
              + +   +G+GQ Q+K      ++  FE + +   +  E    LG +Y          
Sbjct: 368 -NEDNMLAKFGVGQTQVKNKLVEESILTFENLYKNLENIQELNYILGLLYAAKCFDKQST 426

Query: 389 --------LGQIEKAQELLRKAAKIDPRD------AQAFIDLGELLISSDT-GAALDAFK 433
                   L   EKA + L K  K+           +A++ L EL    +    +L+   
Sbjct: 427 KVLSRNEALALNEKAVQFLEKYVKLTSSKKNQVVVPRAYLTLSELYEDQNNYKQSLEYLS 486

Query: 434 TARTLLKKAGEE-VPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYV 492
            A    K  G + +P+E+LNN+G  HF  G+   AH+ F+DA              K  V
Sbjct: 487 KAYEQFKALGSKNIPLELLNNLGCFHFINGDLTKAHEFFEDA--------------KARV 532

Query: 493 IDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLIL 552
             +S                            +T+ +N+AR LE + D   +  +Y  IL
Sbjct: 533 EQSSG---------------------------LTIEYNVARTLESV-DKSESENIYSGIL 564

Query: 553 FKYQDYVDAYLRL---------AAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLE 603
             +  Y+DA +R          A I+   N +    +  +  L+V   Y   L   G  E
Sbjct: 565 SSHPGYIDARMRSLLLRFVQDEADISAIENAVTKFYKENDSNLEVRSFYSWFLKK-GKKE 623

Query: 604 LKNDDWVKA--KETFRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATH----- 656
            +ND    A  KET        D  D YA +SLGN  Y    R E+++ K +        
Sbjct: 624 KRNDSLETAHNKETLTK----YDSHDLYALISLGNL-YSVIGRGERKSSKPKEQENAKQS 678

Query: 657 LEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDV 716
             KA +L+ +V+     N++AA G  +V AE  +   + ++F +++++          DV
Sbjct: 679 FLKAVQLFQKVLQIDPYNVFAAQGIAIVFAENKRMGPALEIFRKLRDSLDNE------DV 732

Query: 717 WINLAHVYFAQGNFALAMKMYQNCLRKFYYNTD-AQILLYLARTHYEA-------EQWQD 768
           + N+AH        A A++ Y+  L++F    + +++L  L +  Y         E +Q 
Sbjct: 733 YCNIAHCLLEMHENAKAVETYEYTLKRFSNAQNRSRLLNLLGKAWYSRGVREKSYEFFQK 792

Query: 769 CKKSLLRAIHLAPSNYT-----LRFDAGVAMQKFS-ASTLQKT---RRTADEVRSTVAEL 819
             K+   A+     N +       F   VA+  F  A TL++    +R    +   ++ L
Sbjct: 793 ALKNAEMALKCEEDNKSSERTIASFQYNVALLHFQIAETLRRATFKQRKVVYITDAISGL 852

Query: 820 ENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAA--KIHREAAEREEQQNRQRQ 877
           ++ + +   L  + N ++    E+++   ++  +  + +A  +I +E  E E +Q+ +  
Sbjct: 853 QSGLDILKELQKSKNFNI--IPEEELEQRIQLGETTMKSALERIAKEQEEFELEQSNKLD 910

Query: 878 EAARQAALAE----EARRKAEEQKKYLLEK-----RKLEDEQKRLRQQEE 918
           EA +     E    E ++K EE ++  LEK     RKL+DE +RL Q+ E
Sbjct: 911 EARKILEENEIERQEKQKKEEEIRQMKLEKQKEEYRKLQDEAQRLIQERE 960


>gi|169612001|ref|XP_001799418.1| hypothetical protein SNOG_09115 [Phaeosphaeria nodorum SN15]
 gi|160702414|gb|EAT83307.2| hypothetical protein SNOG_09115 [Phaeosphaeria nodorum SN15]
          Length = 1142

 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 217/1006 (21%), Positives = 411/1006 (40%), Gaps = 186/1006 (18%)

Query: 14  EVRVALDQ-LPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQILEEGSSPEID 72
           +V V LD+ +  D +++  IL+ E++    W+ +A  Y KQ KV+    +L++     I 
Sbjct: 44  DVEVPLDEDIQDDPTELCAILENEKSLTSTWVQVAVAYAKQKKVDVAIDVLKQA----IG 99

Query: 73  EYYADVRYERIAILNALGVYYTYLGKIETKQR---------EKEEHFILATQYYNKASRI 123
            +      ER++ILN  G+ + YL K     R          K+ +   AT   N+ASRI
Sbjct: 100 VFGRARAEERLSILN--GLCWLYLLKCREAPRVKSDDPNIKTKDAYIQEATGVLNEASRI 157

Query: 124 DMHEPSTWVGKGQLLLAKGEVE--------------------QASSAFKIVLEADRD-NV 162
               P  ++ +G L L +  ++                    QA+  F   L A    N+
Sbjct: 158 SPSHPPLFLARGVLYLLRASLQSPATTAGPNAVSVERAETLKQAAKCFDDALRASGGRNL 217

Query: 163 PALLGQACVEFNRGRYSDSLEFYKRALQVHPSC--PGAIRLGIGLCRYKLGQLGKARQAF 220
            A +G+A V ++ G+++++L+ Y+  L+  P    P   R+GIG C + LG    A  A+
Sbjct: 218 MAKMGRARVSYSLGKWAEALKGYQSVLESSPDLIDPDP-RIGIGSCFWHLGFKDDAAGAW 276

Query: 221 QRALQLDPENVEALVALAVMDLQANE---------AAGIRKGMEKMQRAFEIYPYCAMAL 271
           QR+L L+P++  AL+ LA  +L  +          A   +K ++ +  A  +     +  
Sbjct: 277 QRSLDLNPKSKIALILLAQYNLHLSSQHPPQHPDFAKFYKKTVDYIMSALRLDKNYPLTC 336

Query: 272 NYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMAS 331
             +  +F         + +   A+ +T+     S  +Y+LAR  H++GD  +A   Y  S
Sbjct: 337 ASVGGYFVMRKDWQKAQTVARRAIDLTDVNAIASDGWYHLARKAHAEGDLAEASTCYGRS 396

Query: 332 VKEINKPHEFIFP-YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQ-- 388
            +          P  +G  Q+ +   ++  A    EK+++  P N E    LG ++ +  
Sbjct: 397 DQARGGEERGYIPAKFGSAQMNVLQLNYSGAKFRLEKIIQQSP-NIEAQTLLGTLWAEDV 455

Query: 389 -----LGQIEKAQELLRKAAK---------IDPR-----DAQAFIDLGELLISSDTGAAL 429
                 G  E     L+KA K          DP+     D    ++L  L  +     +L
Sbjct: 456 FAAQNSGSTEDKSAELQKAIKHLDDVQKAWRDPKKKATPDQSVLLNLARLYETEKPEKSL 515

Query: 430 DAFKTARTL-LKKAGEE------------------VPIEVLNNIGVIHFEKGEFESAHQS 470
              +    + L+   EE                  +P ++LNN+   HF+   +  A + 
Sbjct: 516 KCLEEVEKMELEAIPEEDYPELEDEHEIKAALRELLPPQLLNNMACFHFQAERYTRAREL 575

Query: 471 FKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFN 530
           F+ AL        + ++ +   ID  A +                          ++ FN
Sbjct: 576 FEAALN-----ACVKAEARDESIDTDALV-------------------------TSISFN 605

Query: 531 LARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNG 590
           L R  E  ++   A  +Y  +L ++ DY+DA LRLA IA  ++  +L ++ + +  + N 
Sbjct: 606 LGRCYEAENNLDQAKNVYENLLKRHADYIDARLRLAYIAIIQSPNELGLKAIKDLFRENE 665

Query: 591 KYPNALSMLG------DLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALR 644
                 ++ G        +++N    + +  ++      D  D Y+   LGN  + A  R
Sbjct: 666 DNVEVRALYGWFLHKTKRKMQNIAADEEQRLYKHTLQKFDKHDQYSLTGLGNL-HLAMAR 724

Query: 645 NEKRAPKLEATHLEKAKE----LYTRVIVQHTSNLYAANGAGVVLAE-KGQFDVSKDLFT 699
              R+ + E    +K+ E     + +V+    +N YAA G  + + E K     +  +F 
Sbjct: 725 EMPRSSEQEKMKRQKSYETAVAFFDKVLQLDKTNAYAAQGIAIAMVEDKKDSGTALQIFN 784

Query: 700 QVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLART 759
           +V+E       ++   V++NL H Y     FA A++   +      Y+            
Sbjct: 785 KVRET------IKDYSVYMNLGHTYCEMKQFARAIENVNSYRTALDYSQ----------- 827

Query: 760 HYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSAS----TLQKTRRTADEVRST 815
                          +A+ ++PS    +F+  VA   F  +     + +++RT  +V   
Sbjct: 828 ---------------QALKISPSEPNFQFN--VAFMHFQIAQAIINVPESQRTLQQVDDA 870

Query: 816 VAELENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAERE---EQQ 872
           +A L  A+     ++ A    +  F    I +     ++ +   K    A E++   E++
Sbjct: 871 MAGLAEAIDTLDQIAKA---EVTPFPRTDITSRANMGRNTM--VKQLERAREKQVVYEEE 925

Query: 873 NRQRQEAARQ-----AALAEEARRKAEEQKKYLLEKRKLEDEQKRL 913
           N+ + E AR+         +EA+++AE+  +    +RK+ +EQ+R+
Sbjct: 926 NKGKLEQARKLREEEIRRRDEAKQQAEQATQD--RRRKIIEEQERI 969


>gi|154284115|ref|XP_001542853.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
 gi|150411033|gb|EDN06421.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
          Length = 1227

 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 214/957 (22%), Positives = 371/957 (38%), Gaps = 208/957 (21%)

Query: 2   ACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQ 61
           + + IP    + EV ++L++LP D +++  +L  E+A  + W+IIA  Y KQ +++    
Sbjct: 29  SAIDIPASTFDSEVEISLEELPDDPTELCTLLDNEKAAKNFWVIIALAYAKQNQIDHAID 88

Query: 62  ILEEGSSPEIDEYYADVRYERIAILNALGVYYTYL----------GKIETKQREKEEHFI 111
           IL  G    +      V  E++ +L  +   Y             G++ ++ + K+ +  
Sbjct: 89  ILNRG----LSSLAQGVTKEKLGLLGWICWLYMRKSREAPRVAPEGQLVSEAKTKDYYLQ 144

Query: 112 LATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK--IVLEADR---------- 159
            AT   N+ASR++   PS ++ +G L + +  ++  + A +  +V  ++R          
Sbjct: 145 AATSTLNEASRLNPAYPSLFLARGVLSILRASLQPPAKALRPGMVDTSERVETLRQALKC 204

Query: 160 ----------DNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGA--IRLGIGLCR 207
                      N  A+LG+A  ++  GRY+++LE Y+     +     +  +RL +G C 
Sbjct: 205 FDESAKSFGNRNGMAILGRARAQYMLGRYAEALEGYQEGSDKNAEYERSWILRLELGGC- 263

Query: 208 YKLGQLGKARQAFQRALQL-----DPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFE 262
             L QL   RQA    L L        N  A  +L  + +            +  Q+AF+
Sbjct: 264 --LWQLDFKRQAKAAGLVLWLCSRHATNDPAFGSLYKIAM-----------TQYTQKAFK 310

Query: 263 IYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYE 322
           +     M  +    +F        VE L   A+ +T+     S  +Y LAR  H +G+  
Sbjct: 311 VDKEYPMTCSMFGGYFLLRKHFPTVEALARKAIELTDVNAIASDGWYLLARKEHFEGNSA 370

Query: 323 KAGLYYMASVKEINKPHEFIFP-YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKA 381
           +A  YY  S +          P  +G  Q+Q++ GD+  A    EK+++    N E++  
Sbjct: 371 RANEYYTRSDQARGGGDRGYLPAKFGAVQMQVRTGDYDGAKFRLEKIIQ-QTKNPESMTL 429

Query: 382 LGHIYVQ--------------LGQIEKAQELLRKA--------AKIDPRDAQAFIDLGEL 419
           LG ++ +                +++KA  LL            K+ P D    + L  L
Sbjct: 430 LGALFAEEVFAAQSSPLKEDKSAEVKKATSLLESVRASWKDEKKKLSP-DESVLLYLARL 488

Query: 420 LISSDTGAALDAFK-----------------------TARTLLKKAGEEVPIEVLNNIGV 456
             S     ++   +                       T   LL+   E +  ++LNN+G 
Sbjct: 489 YESGSPEKSMQCLQHVEQMQLAQIPDTERPEDIHDEETTTNLLR---EHLAPQLLNNMGC 545

Query: 457 IHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGN 516
             +   + E A   F+         T L++  K+   D SA    F              
Sbjct: 546 FLYHSEKIELARNMFQ---------TALNACVKSRDRDDSADTDAF-------------- 582

Query: 517 HVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQ 576
                    T+ +NLAR  E       A  +Y  +L ++ DY +A  RL  IA       
Sbjct: 583 -------VTTISYNLARTYEAASMPEEAKKVYEGLLERHSDYTEANARLTYIA------- 628

Query: 577 LSIELVNEALKVNGKYPNALSMLGDLELKNDD------WVKAKETFRAASDATDGK---- 626
           L     +E        P  ++ L +LE  N +      W  +K   R A+ A D +    
Sbjct: 629 LRQSPTDEG-------PKKMAKLYELESTNLEVRALFGWYLSKSKRRVANIAEDHEQRHY 681

Query: 627 ----------DSYATLSLGNWNYFAA---LRNEKRAPKLEATHLEKAKELYTRVIVQHTS 673
                     D Y+   +GN    AA    R+ ++  +      EKA E + + +     
Sbjct: 682 KHTLQGYDKHDRYSLTGMGNIFLLAARDMRRDTEQDREKRRKMYEKAVEFFDKALQLDPK 741

Query: 674 NLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPD------VWINLAHVYFAQ 727
           N YAA G  + L      D  KD  T VQ      +F ++ D      V++NL HVY   
Sbjct: 742 NAYAAQGIAIAL-----VDDRKDYTTAVQ------IFSRIRDTLRDASVYLNLGHVYAEL 790

Query: 728 GNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQ----------DCKKSLLRAI 777
             F+ +++ Y+  L K     D QIL  L R        +          DC +   RA 
Sbjct: 791 RQFSKSIENYEAALSKD-RQRDTQILACLGRVWLLKGMQEMNLAAMNTALDCTQ---RAR 846

Query: 778 HLAPSNYTLRFDAGVAMQKFS--ASTLQKTRRTADEVRSTVAELENAVRVFSHLSAA 832
            +AP    L F+      + +    +L +T+++  +V+     L+ A+  FS ++ A
Sbjct: 847 AIAPEQIHLEFNVAFVQNQIAQLVVSLPETQKSLQDVQIASDGLDEAINTFSQIAKA 903


>gi|50545131|ref|XP_500103.1| YALI0A15686p [Yarrowia lipolytica]
 gi|49645968|emb|CAG84034.1| YALI0A15686p [Yarrowia lipolytica CLIB122]
          Length = 981

 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 220/932 (23%), Positives = 387/932 (41%), Gaps = 153/932 (16%)

Query: 4   VYIPVQNSEEE-VRVALDQ-LPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQ 61
           + IP  +++ + + + LD+ +  D  +I  +L+ E+     WL I   Y  +G   +  +
Sbjct: 6   IEIPCADADGDFISLDLDKDIQEDPEEICVLLENERCDKAFWLAIGLAYSSKGLTNEAIE 65

Query: 62  ILEEG-SSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFI-LATQYYNK 119
           ++     SP + E       +R+ + N L   + +L +      ++    +  AT+Y NK
Sbjct: 66  VVTRALKSPSMKE-----SGDRLPLYNCL--VWLFLKQYRAAPVDQRSAVLEKATEYANK 118

Query: 120 ASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYS 179
           A  ID       + +    +  G  + A + F  VL+    N+ AL+G+A V + +  Y 
Sbjct: 119 AFSIDKTWRVNVLTEAVFKIQTGGWDGALTNFNTVLQTQNTNLLALMGKARVLYEKKNYR 178

Query: 180 DSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPEN---VEALVA 236
           ++L+ Y+  L   PS     R+GIGLC + LG   +A  AF+RA +L  +    V+ ++A
Sbjct: 179 EALKLYQSVLSQRPSMKPDPRIGIGLCFWSLGSKEEALAAFERANELAKDKNAFVKVMLA 238

Query: 237 LAVMD--LQANEAAGIRK----GMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQL 290
             + D  LQ        K    GM  ++ +FE+ P  A  L  L   FF       + +L
Sbjct: 239 TCLFDKALQNVATDDFEKYYALGMLHVKDSFELDPKHAPTLVQLQKFFFTKRNTDAIVKL 298

Query: 291 TETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQ 350
            +TA+  + +       ++ + R++   G  ++A    + S ++  K        +    
Sbjct: 299 GDTAINQSENPKVLGQIHFWMGRAHQLAGHVQQA----LESFRQAEK--------FDRDN 346

Query: 351 VQLKLG--------DFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRK- 401
           V  KLG        + + A    + +L   P   E    LG IY +  +  KA  LL+  
Sbjct: 347 VGYKLGRALVLWRSNVQEATLLLDGILNSNPKCLEAKVMLGLIYAE-QESPKALPLLQHW 405

Query: 402 -AAKID-PRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHF 459
            A+K D   D + F+ L +L   S+  AA++        LK+   E     LNNI +  +
Sbjct: 406 VASKGDGAVDEEIFLLLSKL--ESNPKAAVEH-------LKRVSSEDDPATLNNIAIYQY 456

Query: 460 EKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVE 519
              ++++A  SF+ A                 V D   S                     
Sbjct: 457 SAHDYDAAQASFEKA---------------KEVADEDQS--------------------- 480

Query: 520 LPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSI 579
                VT+ +N+ R LE    T  A  +Y  +      Y DA +RLA +    +N     
Sbjct: 481 -----VTITYNIGRTLEAKGKTEEARKIYESM-----QYPDADIRLAFLDIVESN----- 525

Query: 580 ELVNEALKVNGKYPNAL--SMLGDLELKN-DDWV-----KAKET--FRAASDATDGKDSY 629
                    +G   +AL   M+ +LE++    W      KA+ET   +  +D  D  D Y
Sbjct: 526 ---------DGGRLDALMERMVTNLEVRALQGWYLRRTRKAEETHLIKTLTD-FDKHDVY 575

Query: 630 ATLSLGNWNYFAALRNEKRAPKLEA------THLEKAKELYTRVIVQHTSNLYAANGAGV 683
           A +S GNW Y    R+ K  PK  +       +  KA E +++ +       YAA G  V
Sbjct: 576 ALVSFGNW-YLTKARSIK--PKNNSDVEKKNKNYFKAAEFFSKALALDPKCAYAAQGVAV 632

Query: 684 VLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRK 743
           + AE  + D++ ++F +V+E  +  +      V++NL H +F    +  A++ Y+  L +
Sbjct: 633 IFAETNRADLAINIFKRVRETITDDI-----SVFVNLGHCFFDLKQYDKAIQSYEVALDR 687

Query: 744 FYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAG----VAMQKFS- 798
           F   +D  +L  L R  Y         K L  A+ L      L+ D      VA  +F  
Sbjct: 688 FKGGSDVTLLSLLGRAWYARGISAKQLKYLDTALELCRKAVELQADPSTTFNVAFIQFQV 747

Query: 799 ASTLQKT---RRTADEVRSTVAELENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHL 855
           A  L+KT   +R   E+ + +  +  A+     L+++       F ++++         +
Sbjct: 748 AEVLRKTEASKRQLSEIEAAIKGMTEAIASLKELASSDT---PPFPKEELEQRASMGNTV 804

Query: 856 LDAAKIHREAAEREE--QQNRQRQEAARQAAL 885
           +   ++ R  AE++E  + N  + E ARQ  L
Sbjct: 805 V--KQLERALAEQKEYDEANNAKLEEARQYVL 834


>gi|26333697|dbj|BAC30566.1| unnamed protein product [Mus musculus]
          Length = 211

 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 74/210 (35%), Positives = 125/210 (59%), Gaps = 7/210 (3%)

Query: 4   VYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQIL 63
           + IP+++++E + +  DQLP +  +++ ILK E   L +W+ +A EY+KQGK E+F ++L
Sbjct: 6   IEIPLRDTDEVIELDFDQLP-EGDEVISILKQEHTQLHIWIALALEYYKQGKTEEFVKLL 64

Query: 64  EEGSSPEIDEY--YADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKAS 121
           E   +  ID    Y D   +++  L+ L  YY    + E  +  K++    AT  Y  A 
Sbjct: 65  E---AARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNKKDLITQATLLYTMAD 121

Query: 122 RIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSD 180
           +I M++ +  +G+    L +G+ ++QA + F  VL    +N+PALLG+AC+ FN+  Y  
Sbjct: 122 KIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPALLGKACISFNKKDYRG 181

Query: 181 SLEFYKRALQVHPSCPGAIRLGIGLCRYKL 210
           +L +YK+AL+ +P CP  +RLG+G C  KL
Sbjct: 182 ALAYYKKALRTNPGCPAEVRLGMGHCFVKL 211


>gi|388582667|gb|EIM22971.1| TPR-like protein [Wallemia sebi CBS 633.66]
          Length = 1057

 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 179/764 (23%), Positives = 332/764 (43%), Gaps = 119/764 (15%)

Query: 131 WVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQ 190
           ++GK  L LA+G ++ A S F  +L+    NV AL+G+A V   +  Y+++L  Y+  L+
Sbjct: 109 YLGKASLQLAQGNLDAALSTFNSILKGYSRNVFALMGKARVLHVKRHYAEALRVYQEVLR 168

Query: 191 VHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDL----QANE 246
           + P+     R+GIGLC ++L    +A+ A++R+  L+P      + L ++++    + NE
Sbjct: 169 ISPNLMPDPRIGIGLCFWQLNCPKEAQAAWKRSSHLNPTLYAPQLLLGLLNINEAKKPNE 228

Query: 247 AAGIR-----KGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG 301
               R     KG++ +  A+++  Y + A N LA +F    +     +  E A+   +  
Sbjct: 229 PDHYRMKSYSKGIQYVHTAYKLNEYNSNAANVLAYYFLGKRKMPTAIRYAERAIQYADAI 288

Query: 302 PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSA 361
           P    ++ NL R +H   + E A   Y  +++    P+  I    G GQ+ L       A
Sbjct: 289 PVLVDAHNNLGRVHHYNKNTEDALRCYKVALER--SPNNII-AQLGRGQLLLTDETLMQA 345

Query: 362 LTNFEKVLE----------------------IYP--------DNCETLKALGHIYVQL-- 389
           + +F+K+++                      + P         N E+ + L   +++L  
Sbjct: 346 VHHFDKLVQGQTQKGSPMPEALLILATLRSKVLPGISTSELHKNRESARDLFDRFLKLVM 405

Query: 390 -GQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPI 448
            G  E+    LR        +A+ FI+L ++    +   + +A++ A TL  + G  +PI
Sbjct: 406 KGSTEEGS--LRGLGN----EAETFIELAKIWEKDNLQKSSEAYERAYTLRSQQGLSIPI 459

Query: 449 EVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLF 508
           E+LNN+ V+   +G   +A                     K Y++ A   +   +     
Sbjct: 460 EMLNNVAVLTARRGNVANA---------------------KAYLLQAVERLTNGESNTPD 498

Query: 509 HRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAI 568
            R +     V +  +  T+ +NL RLLE + D   A  LY  +L ++ +Y +  +RLA++
Sbjct: 499 FRIKK----VNIEQHSCTIKYNLGRLLEDMGDHQEARRLYNEVLIEHPEYFECKVRLASL 554

Query: 569 AKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGK-- 626
                    +  L+ E L     + N  +      L+ D  V + + F    D T  K  
Sbjct: 555 YIDEKRPDEAHTLLKEVLTTWNDHKNLRAFYTHFLLQYD--VSSAKRF---CDDTLKKIA 609

Query: 627 --DSYATLSLGNWNYFAALRNEK-RAPKLEATHLEK----AKELYTRVIVQHTSNLYAAN 679
             D YA L +  W  +   R+ + +    EA   E+    A   + + +      +YAA 
Sbjct: 610 PNDVYA-LCVSGWITYIKSRDMRVKTGTSEAKDRERQFREAIIYWEKALRYDPRCVYAAQ 668

Query: 680 GAGVVLAEKGQFDVSKDLFTQVQEAASG-------SVFVQMPD------VWINLAHVYFA 726
           G  + +AE    D S+    +  E  +        S+F ++ D      V+IN+ H ++A
Sbjct: 669 GLAIAIAENVVPDSSRRDKEEPSEEDNAKSRREALSIFTKIRDSLDEACVYINMGHCFYA 728

Query: 727 QGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHY----EAEQWQDCKKSLLRAIHL--- 779
           Q  F  A+++Y++ L K   N D   LL+  R +Y    +  ++   +KSL  A      
Sbjct: 729 QDEFDKAVEVYEHGLSK---NEDTITLLHACRANYSKGVQRSEFHYLEKSLTLAQTASVK 785

Query: 780 APSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAV 823
           AP + +++++  +  QK     LQ    T  + RS + +L+ A+
Sbjct: 786 APKDKSIKYNIAMIEQKM----LQVVLDTPSDKRS-LQDLQKAI 824


>gi|124087400|ref|XP_001346840.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|145474967|ref|XP_001423506.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|50057229|emb|CAH03213.1| Conserved hypothetical protein, TPR domain [Paramecium tetraurelia]
 gi|124390566|emb|CAK56108.1| unnamed protein product [Paramecium tetraurelia]
          Length = 1084

 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 187/881 (21%), Positives = 362/881 (41%), Gaps = 123/881 (13%)

Query: 21  QLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQILEEGSSPEIDEYYADVRY 80
           ++P D ++I+  L  ++A L  W  I+   F   + + F ++++  ++  I+++  D   
Sbjct: 18  EIPNDVNEIIQTLITKEASLQQWESISYALFNHKRYDDFLELMKYLTNNLINKFNDDQSK 77

Query: 81  E-RIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLL 139
           + +I I N+L +YY      +    +  ++F    + +N + + D     T+  KG    
Sbjct: 78  KIKIRIYNSLSLYYLIQATRQDGFDKASDYFDNVVKNFNLSDKYDF-VSHTFSIKGLFSF 136

Query: 140 AKGEVEQASSAFKIVLE---ADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS 194
            KG+ +Q  S ++   +   + RD  +V   +G A   F  G Y DSL+++KRAL+  P+
Sbjct: 137 YKGDKDQTFSYYRTSFDETSSARDTLSVTPCIGTAQAYFAVGNYKDSLQYFKRALKHKPN 196

Query: 195 CPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGM 254
             G  RLG+  C Y L Q   A  AF+R LQL+P NVEA + LAV+   A +     +  
Sbjct: 197 IAGKARLGLAYCYYNLEQYSLAYYAFKRVLQLEPRNVEAHIGLAVL---AFDKGDYDEYF 253

Query: 255 EKMQRAFEIYPYCAMALNYLANHFFFTGQH-------------------FLVEQLTETAL 295
            ++ +AF I     + L +L+ H+ F   +                   F  ++ ++   
Sbjct: 254 NRLCKAFTINQNHPITLYHLSEHYLFKLDYQRAMICIQNGLKALDNVSRFQFKEKSQEDQ 313

Query: 296 AVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKL 355
              +    K    Y +      +G+YE++  YY    K+ N+ +  +     LG  QL L
Sbjct: 314 FRNDWSQLKCRYLYLIGLIKQIEGEYEQSLKYY-NQAKQYNRNNVLVL----LGLSQLYL 368

Query: 356 GDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQ--------ELLRKAAKIDP 407
                  T   K+ E      E    +  +Y QL  I+           E  RKA + + 
Sbjct: 369 NPQSQNYTESYKLAEKIAKQYENTDFMWELYKQLAYIQSKNLQIRKPVIETYRKALQYND 428

Query: 408 RDAQAFIDLGELLISSDTGA--------ALDAFKTART--LLKKAGEEVPI-EVLNNIGV 456
           +D +  I+  + + + D            L  F   +   +L+K  E++   E+  N+GV
Sbjct: 429 KDFETLIEFAQQIENEDASTYYQTAEDLLLSKFNNQKNTMILQKITEQIIFPELYINMGV 488

Query: 457 IHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGN 516
            H    +   A +S+     +     + + +   YV+D +               E    
Sbjct: 489 -HLANTDLLKALKSY-----EKCQQLIEEFQIPDYVVDTTE--------------EASKQ 528

Query: 517 HVELPWN--KVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNN 574
            V+L  N  ++ + FN   L+EQ+ D V A  L++  +     ++D+Y+RL+        
Sbjct: 529 EVQLKKNMYQIVLSFNKGILMEQLGDYVTAMELHQQCIKINPYFIDSYVRLSY------- 581

Query: 575 LQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASD------------- 621
           LQ  +          G Y +AL  + D ++  + +V     ++  +              
Sbjct: 582 LQFHL----------GDYKDALRTISDSKIYYEQYVNHNRNYKGQNPVPMIHGYIAYQLQ 631

Query: 622 ----ATD-----GKDSYATLSLGNWNY-FAALRNEKRAPKLEATHLEKAKELYTRVIVQH 671
               A D     G+D Y+ + L   +Y  AA + +    + +   L +      +++   
Sbjct: 632 DQGGAVDQFKRYGEDCYSKIFLMAHDYQLAADKTKNDDQQFKKKVLRQIASTGMKLLQHE 691

Query: 672 TSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLA--HVYFAQGN 729
             NL AA    +V+AE G++  + +L   +QE A      Q P +  NLA         N
Sbjct: 692 PKNLQAAITLILVIAELGKYTEALNLLGDLQEYAH-----QQPRILSNLAILDCLIMPNN 746

Query: 730 FALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFD 789
              A   ++    K  Y  D    L +A+ +   +++++    + R I   P +   R +
Sbjct: 747 NQSAKTYFKKYYEKTNYKPDEHTDLAVAKMYLNNKKYRESANVIKRQILNNPGDLKHRLN 806

Query: 790 AGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLS 830
             + + ++    +Q+ + +   +R+ V   +  ++ + ++S
Sbjct: 807 LNMVVHQYCYE-IQEEKCSYKLLRTAVTYFKCLLKSYEYMS 846


>gi|378730586|gb|EHY57045.1| hypothetical protein HMPREF1120_05096 [Exophiala dermatitidis
           NIH/UT8656]
          Length = 1241

 Score =  136 bits (342), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 225/1024 (21%), Positives = 415/1024 (40%), Gaps = 194/1024 (18%)

Query: 2   ACVYIPVQ---NSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQ 58
           + V IPV    +++E V V L+    D +++  +L+ E+A  +LW+ IA  Y KQ +++ 
Sbjct: 33  SAVDIPVSGGLDADEAVEVNLEDNLDDPTELCQLLENEKAAKNLWITIALAYAKQKQIDH 92

Query: 59  FRQILEEG------SSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQ--------- 103
             +IL +G      S P+          ER+++L  +     +L  ++++Q         
Sbjct: 93  AIEILVKGLGSLSRSGPK----------ERLSLLTCVA----WLNLLKSRQAPRVLPESQ 138

Query: 104 -----REKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVE------------- 145
                + K+ +   AT   N A RI+   P  ++ +G L L +  ++             
Sbjct: 139 QSSEAKTKDHYLREATATINDALRINPAYPPLYLTRGVLYLLRASLQSSTKTGAEAERAE 198

Query: 146 ---QASSAFKIVLEA-DRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS-CPGAIR 200
              QA   F   L A D  N+ A +G+A   +   ++S +L+ Y+  L   P       R
Sbjct: 199 SLKQALKCFDDALRASDGRNMMAAMGRARTLYLLKQFSPALQVYQEVLSKMPGHTDPDPR 258

Query: 201 LGIGLCRYKLGQLGKARQAFQRALQLDPEN--VEALVALAVMDLQANEAAG-------IR 251
           +GIG C ++LG   +A+ A++R++ L+PE+    AL+ +  +   A   A         +
Sbjct: 259 IGIGCCYWQLGFHERAKMAWERSVALNPESKVAHALLGVYYLHESAKYPASDPQFNLLYK 318

Query: 252 KGM-EKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYN 310
           K M E  ++A+ I     ++    A++F  TG++  VE L   A+  T+     S  +Y 
Sbjct: 319 KAMSEHTKKAYTIDKNFPLSCATFASYFLLTGRYDTVEPLARKAIEQTDINAIASDGWYL 378

Query: 311 LARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY-YGLGQVQLKLGDF----------- 358
           LAR  H+KGD  KA  YY  S +      +  FP  +GL Q+ ++ GD            
Sbjct: 379 LARKEHNKGDLAKASDYYTRSDQARGGLDKGYFPAKFGLIQIMVQSGDLQGAKFRLESLG 438

Query: 359 ------------------------------------RSALTNFEKVLEIYPDNCETLKAL 382
                                               R A+T  E V   + D    ++  
Sbjct: 439 QLNRHVEAMTLLGCLYAEEAFSSQNTPTKEEKAASARKAITLLENVRRTWKDEKSRVRPD 498

Query: 383 GHIYVQLG---QIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLL 439
             + + L    ++E   E  +   +++    +  +D  +  +  D            T +
Sbjct: 499 ESVLLYLARLYELENPVESFKCLQQVEAMQLEKILDEDKPDVGEDEA----------TYI 548

Query: 440 KKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASM 499
            +  E +P ++LNN+    + +  +  A ++F+ AL   + LT    K +          
Sbjct: 549 SQLRENLPPQLLNNMACFLYNQESYSLARETFQIALNACVKLT---EKQEAEKKAVEEEK 605

Query: 500 LQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYV 559
           +  +++      +N      +     T+ +NLAR  E +  T  A  +Y  +L ++ DY 
Sbjct: 606 ISSEEV------DNSDTDALV----TTISYNLARTYEALGLTAEAQKVYEGLLARHADYT 655

Query: 560 DAYLRLAAIA---KARNNLQLSIELV-------NEALKVNGKYPNALSMLGDLELKNDDW 609
           DA  RLA +A     R+     I  V        E   + G Y ++     +   ++ ++
Sbjct: 656 DASARLAFLALESSPRDEGPRKIHAVYQSDYGNTEVRALMGWYHHSAKKKTNNVAEDVEY 715

Query: 610 VKAKETFRAASDATDGKDSYATLSLGNWNYFAA---LRNEKRAPKLEATHLEKAKELYTR 666
              K T +      D  D Y+   +GN +   A    RN  +  +  +    KA E + +
Sbjct: 716 RHYKHTLQ----GYDKHDLYSLTGMGNVHLAIARDMPRNTDQEKEKRSKMYAKAYEFFDK 771

Query: 667 VIVQHTSNLYAANGAGVVLA-EKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYF 725
            +     N YAA G  + L  +K  +  +  +FT+V++       ++   V +NL H+  
Sbjct: 772 ALQLDPKNAYAAQGVAIALCDDKKAYSDALQIFTKVKDT------LRDASVNVNLGHILT 825

Query: 726 AQGNFALAMKMYQNCLRKFYYNTDAQILLYLART---HYEAEQWQDCKKSLL----RAIH 778
               +  A+  Y   +RK     +AQ+L  L+R      +A++      + L    RA+ 
Sbjct: 826 ELRQYQRAIDNYDLAMRKEGKAENAQLLACLSRAWLLKGKADRSIPALNTALDYMKRALA 885

Query: 779 LAPSNYTLRFDAGVAMQKFS----ASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASN 834
               +  L+F+  VA  +F      +  ++T RT ++V + +A LE A+  F  ++    
Sbjct: 886 TQSDSPHLQFN--VAFIQFQIAQHVNQAKETDRTLEDVDAAIAGLEAAIETFEQVAR--- 940

Query: 835 LHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEAARQAALAEEARRKAE 894
                      +    Y +  L+     R A  +   +N+  ++ ARQAA   E   K E
Sbjct: 941 -----------HKQPPYPRTALE----QRAAMGKNTMRNQLERQRARQAAYESENAAKLE 985

Query: 895 EQKK 898
           E K+
Sbjct: 986 EAKQ 989


>gi|302696115|ref|XP_003037736.1| hypothetical protein SCHCODRAFT_71544 [Schizophyllum commune H4-8]
 gi|300111433|gb|EFJ02834.1| hypothetical protein SCHCODRAFT_71544 [Schizophyllum commune H4-8]
          Length = 939

 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 203/922 (22%), Positives = 372/922 (40%), Gaps = 178/922 (19%)

Query: 29  ILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNA 88
           +LD+L+  QA    W   A EY++ G+++   Q+ E G    I+   A      ++ L+A
Sbjct: 1   MLDLLRDSQATAYQWTQFAAEYWRLGRLDDAEQLAESG----IEVLTAKGMSHGLSALHA 56

Query: 89  LGVYYTYLGKIET--------------KQREKEEHFILATQYYNKASRID--MHEPSTWV 132
           L +    L ++ +               ++ KE++   ATQ+ N  +     +   +  +
Sbjct: 57  L-LSNIQLARVRSAPKVILPDAKMDILHEKTKEDYHGSATQHLNHCAEDSEYLSGQTCML 115

Query: 133 GKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVH 192
            +  + L+   ++ A  +F  VL     N  AL+G+A +     ++ ++L+ ++  LQ++
Sbjct: 116 TRAIMQLSTRAIDDALKSFDFVLTKWPTNFVALMGKARILLLHRKHREALKLFQHVLQLN 175

Query: 193 PSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPEN--VEALVAL-----AVMDLQAN 245
           P+C    R+GIG+C + LG   KAR A+QR+ +LDP +  V  L+ L     A+ D + +
Sbjct: 176 PNCKPDPRIGIGMCLWSLGYKDKARLAWQRSHELDPTDWSVNLLLGLYEYNAAMSDEETD 235

Query: 246 EAAG--IRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVE-----QLTETALAVT 298
           E A   +   + ++  AF+     A A N LA       +   V      +L E  +   
Sbjct: 236 EYATLLVESSLARITSAFKKNNKSAAASNILAEILLLKKEKGKVRPMEAMKLAERTIQFA 295

Query: 299 NHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDF 358
           +        +  LAR  H  GD   A   Y  +VK  N     +    GL Q+Q+   + 
Sbjct: 296 DTLSMLHEGHLRLARVAHRNGDNAMAMKNYEVAVKSKN-----VLASIGLAQMQMLNDEI 350

Query: 359 RSALTNFEKVLEI--YPDNCETLKALGHI--YVQLG--------QIEKAQEL-------- 398
            +A+   + ++++    D  E L  L  +  Y + G        +  +A+EL        
Sbjct: 351 PAAIHTLDTLVKLPEAKDVPEALVMLASLRAYHRPGISSSDLAKERARARELYTRISSLI 410

Query: 399 ---LRKAAKIDPRDAQAFIDLGELLISSDTGAALDAF-KTARTLLKKAG--EEVPIE--V 450
               R+   +   D   +I++ +L  + +    L+A  + AR     A   EE P++  +
Sbjct: 411 ADGARRVPAVVASDPDMYIEIAQLWQADNRPRTLEALEQAARVCTTPAAGVEERPVDPRL 470

Query: 451 LNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHR 510
           +NN GV+H  +G+ E A   ++ A+            TKT  +     M+          
Sbjct: 471 MNNQGVLHHMQGKHEPAVVLYRQAI------------TKTLQLGPEGEMM---------- 508

Query: 511 FENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAK 570
                          T+L+NL R+ E   D +AA   Y  +L  + +YVDA +R A +  
Sbjct: 509 -------------GATMLYNLGRVYEDSRDDLAAKEAYDKLLELHPEYVDAKIRQAHMLI 555

Query: 571 ARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYA 630
             N    + +L+ +AL+    + N  +               KE   A     D  D YA
Sbjct: 556 GINKHNEAHDLLKQALQSQPSHGNLRAYYTYFLSTTHPPRITKEFVFATLKDHDKNDVYA 615

Query: 631 TLSL----------GNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANG 680
             +              N    L + KR       + ++A E Y R +   +    AA G
Sbjct: 616 LCAAGAAHYAQARESRDNSSKGLEDRKR-------NFQRAVECYDRALHIDSRCAVAAMG 668

Query: 681 AGVVLAEKGQFDVSK-------------------------DLFTQVQEAASGSVFVQMPD 715
             +  AE     +S+                         DLF +++E+          +
Sbjct: 669 LAIATAEDALDTLSRGKTEMNPAARQREELARRKQHGEALDLFGKIRESLDSG------N 722

Query: 716 VWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYE------------- 762
           V+IN+ H +F +  F  A+  Y++ L+   +     +LLYLAR  Y              
Sbjct: 723 VYINIGHSHFFREEFDKAIAQYESALKHLGHR-HVPLLLYLARAWYTRGTRMKRGMEPRN 781

Query: 763 ------AEQWQDCKKSLL---RAIHLAPSNYTLRFDAGVAMQKFSA----STLQKTRRTA 809
                 AE+    KK+L    +A+H++P +  ++++  +  QK +     + +Q  +R  
Sbjct: 782 LMKKEWAERISHIKKALAYAEKALHVSPGDKAIQYNIAMITQKPAELLLNAQIQPHQREL 841

Query: 810 DEVRSTVAELENAVRVFSHLSA 831
           D ++  +     A ++++ LSA
Sbjct: 842 DTLQWAIDCAHTAQKLYAALSA 863


>gi|323449047|gb|EGB04938.1| hypothetical protein AURANDRAFT_72385 [Aureococcus anophagefferens]
          Length = 1937

 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 110/329 (33%), Positives = 150/329 (45%), Gaps = 52/329 (15%)

Query: 4   VYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQIL 63
           + IPV+ S   V V  D+LP D +D++D+L+AE APL+ W   A  Y  QGK EQFR+IL
Sbjct: 656 IIIPVRGSSNTVEVFNDELPEDPADVIDLLRAELAPLNTWCEFAVAYHNQGKREQFREIL 715

Query: 64  EEGSSPEIDEYYADVRYE---------RIAILNALGVYYTYLGKIETKQREKEE--HFIL 112
             G     D Y     Y          R+ +LN L    T     E  ++E  E   +IL
Sbjct: 716 -LGVVDAFDVYEMQDFYRRQPDLFASGRLRVLNLLAASATSNFIAEELRKEAREALTYIL 774

Query: 113 AT--------QYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK-------IVLEA 157
            T        +Y  +A +I      TW+ K   L   GE    + A +         L +
Sbjct: 775 ITIAWRQKALEYIGRADKISTSCSQTWLVKA--LFWIGEHHHDAHALRNSAYYADSALRS 832

Query: 158 DRD-NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGA-IRLGIGLCRYKLGQLGK 215
           D   +  A L +A V F+  ++SD+L  Y   L+  P   GA  R+G+GLC Y LG   K
Sbjct: 833 DNGASCNARLAKAAVLFHECKFSDALRLYASTLRSDPRAAGASARIGVGLCAYHLGDKDK 892

Query: 216 ARQAFQRALQLDPENVEALVALAVMDLQANEAAGI--RKGM------------------- 254
           A  A +RAL L    VEALVA+A++ L       I  RKG                    
Sbjct: 893 ALTALERALSLGTTCVEALVAVAILRLDQESDPKIMGRKGTGLLSKRATAGPVQVINSPG 952

Query: 255 EKMQRAFEIYPYCAMALNYLANHFFFTGQ 283
             + RA E+ P C+MALN+  NH F+  Q
Sbjct: 953 RMLSRARELDPTCSMALNHYGNHLFWLWQ 981



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 74/320 (23%), Positives = 128/320 (40%), Gaps = 48/320 (15%)

Query: 523  NKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELV 582
            N V +  NLA++     D   A  L RL +    + +   L LA +A A  +++ + +  
Sbjct: 1410 NSVPIYLNLAQVHAAAGDLPRARELARLAVALAPNNIRCKLLLARLAFAMRDVEQARKHT 1469

Query: 583  NEALKVN-------------GKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSY 629
              A+K++             G   ++LS+   +  K +++ +A +T     D       +
Sbjct: 1470 ASAVKISLGLMDGSSGAIFLGLVADSLSVASVMWRKLENYEEALKTLDYLKDLKISNRGF 1529

Query: 630  ATL----SLGNWNYFAALRNEKRA-----PKLEATHLEKAKELYTRVIVQHTSNLYAANG 680
            +T+    +L N ++   +R+ +       P   A  L+ A +     +    S   AA  
Sbjct: 1530 STVYANATLSNLHFRDQIRSGRTGIGDIQPDHRAQQLKNAADCARSALNDDPSCAMAAQA 1589

Query: 681  AGVVLAEKGQFDVSKDLFTQVQE-------AASGSVFV------QMPDVWINLAHVYFAQ 727
             G VL E G+ D S  +F +VQE       A+ G   +       + D  INLAH     
Sbjct: 1590 LGAVLLESGKLDDSMLIFERVQEKLVAGSKASCGDSAIDRDASCSVLDAAINLAHSRLLA 1649

Query: 728  GNFALAMKMYQNCLR--------KFYYNTDAQ-----ILLYLARTHYEAEQWQDCKKSLL 774
            G +  A   Y  C +        K +    AQ     +  +LAR  + A + Q  +++L 
Sbjct: 1650 GKWLEAAANYATCAKVLIAMSAGKMFVPCSAQTRRADVYHWLARACHGANEAQGARRALA 1709

Query: 775  RAIHLAPSNYTLRFDAGVAM 794
             AIHL P N   R    + +
Sbjct: 1710 AAIHLQPGNLAFRCHCAILL 1729



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 54/204 (26%), Positives = 94/204 (46%), Gaps = 16/204 (7%)

Query: 287  VEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYY 346
            ++ L   A   T     ++ +Y+ L R++H + +++ A  +Y+ + K    PH F    +
Sbjct: 1070 IDDLASRAYHCTAVPEIQAEAYFILGRNHHVRNEFQGALPFYVQACKLW--PH-FALAQF 1126

Query: 347  GLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKID 406
             L QV+  + D  +AL   E  LE+ P+  E L+ +G + +     +   E+LR A   +
Sbjct: 1127 RLAQVRAAMNDLPAALEAAEVALELAPNAHEVLRLVGLLRLTQNSTKSPLEVLRHAIAQN 1186

Query: 407  PRDAQAFIDLGELL---ISSDTGA----------ALDAFKTARTLLKKAGEEVPIEVLNN 453
              D   ++ L   L   I +D             A+DA+  A  L  ++   VP ++ NN
Sbjct: 1187 SNDTCTWLALASALERHIFTDDAVHERDPSLVRKAIDAYDNAAKLKWESSSTVPFQISNN 1246

Query: 454  IGVIHFEKGEFESAHQSFKDALGD 477
            +GV+H   GE   A  +F  AL D
Sbjct: 1247 VGVLHLCLGEARPAQSAFLSALHD 1270


>gi|50285201|ref|XP_445029.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49524332|emb|CAG57929.1| unnamed protein product [Candida glabrata]
          Length = 1110

 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 247/1047 (23%), Positives = 413/1047 (39%), Gaps = 213/1047 (20%)

Query: 6   IPVQNSEEEVRVALD-QLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQILE 64
           IP++ SEE V + L+  LP DA+D+  +L  E +  + WL IA  Y  QG+  Q  +++E
Sbjct: 20  IPLKASEELVSIDLETDLPDDAADLKTLLVEESSDKEHWLTIAIAYCNQGRTSQGIRLIE 79

Query: 65  ------EGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYN 118
                 EG+              + ++   L   +  L K  T   E  EH +   + + 
Sbjct: 80  LALDVFEGAG-------------KASLHTFLTWAHLKLAKESTTSAETREHELTQAEVH- 125

Query: 119 KASRIDMHEPSTWVGKG----QLLLAKGEVEQASSAFKIVLEA-----------DRDNVP 163
              R  +    TWVG       L   +G  ++A     + +++            + N  
Sbjct: 126 --LRDAIGYDPTWVGNMLATVDLYYERGNYDKALETCDLFVKSIYAEDKRTGRISKPNAM 183

Query: 164 ALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRA 223
            +L +A + + +  Y  SL+ ++  L ++P      R+GIG+C ++L     A QA++RA
Sbjct: 184 FILLRAKLMYQKKNYVASLKLFQELLVINPVLKPDPRIGIGMCFWQLKDYKLAIQAWERA 243

Query: 224 LQLDPENVEA--LVALAVMDLQANEAAGIRKGMEKMQRAF----EIYPY---CAMALNYL 274
           LQLDP N +A  LV L        EA       EK   A      +Y       + L  L
Sbjct: 244 LQLDPNNKQASILVLLGKFHNSLTEAENDEDFKEKYAAALADLNTVYTNSKESPVLLVLL 303

Query: 275 ANHFFFTGQHFLVEQLTE---TALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMAS 331
              FFF G +  V  + +   + L+        S S +   R+ ++ GDY KA   +  S
Sbjct: 304 QTFFFFKGDYEKVITIHDQKISKLSFLAPESVYSESLFWCGRASYAMGDYRKAFTMFQES 363

Query: 332 VKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQ--- 388
           +K   +    +    GLGQ Q+K      ++  FE + +   +  E    LG +Y     
Sbjct: 364 LK---RDENNLLARLGLGQTQIKNSLVEESILTFESLYKANENVQELNYILGMLYTAKCI 420

Query: 389 ----------------------LGQIEKAQELLRKAAKID---------PRDAQAFIDLG 417
                                 +  I KA   L +  K+          PR       L 
Sbjct: 421 ADPAKNNDSTGNKQKNLTGAELVKMIGKALHFLDRYIKLTAAKKNQMTVPRVHLVMSQLY 480

Query: 418 ELLISSDTGAALDAFKTARTLLKKAGEE--VPIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
           EL   S    AL++ + A   +K    E  VP+EVLNN+  ++F  G++E A +      
Sbjct: 481 EL--QSQYHLALESLEKAIENIKFFDGENGVPLEVLNNLSCLYFITGDYEKAQK------ 532

Query: 476 GDGIWLTLLDSKTKTYVIDASASM-LQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARL 534
               +L L D +      D +  + L + D ++     +D N         T L     +
Sbjct: 533 ----YLALADGRLSQSSNDGAEKLVLNYNDARILEA--SDAN---------TALTRYGSI 577

Query: 535 LEQIHDTVAASV--LYRLILFKYQDYVDAYLRLAA-----IAKARNNLQLSI-------- 579
           L +    VAA V  LY  +     D  D Y RL+      +   ++NL++          
Sbjct: 578 LGKHPGHVAAKVRELYLTLEKTGVDNSDEYKRLSEEVENLVESEKDNLEVRAFYSWFLKR 637

Query: 580 -ELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWN 638
            EL   A+  N    +A +         D  VK            D  D YA +SL N  
Sbjct: 638 SELTGRAVAENNAKESAFN--------RDTLVK-----------YDSHDKYALISLANLY 678

Query: 639 YFAA--LRNEKRAPKLEATHLE--KAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVS 694
              A   R+ K +   E +     KA +LY +V+     N++AA G  ++ AE  +   +
Sbjct: 679 VTLARDARHSKSSKDQEKSKQSFLKATQLYQKVLQLDPLNVFAAQGIAIMFAESKRMGPA 738

Query: 695 KDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTD----A 750
            ++  +V+++      ++  DV +N+AH       +  A++ Y+  L+KF  +      +
Sbjct: 739 LEILRKVRDS------LENEDVHVNIAHCLLDMREYVKAIEAYEFVLKKFCTDNSSMNKS 792

Query: 751 QILLYLARTHYEAEQWQDCKKSLLRAIHLAP--------SNY-TLRFDA----GVAMQKF 797
           ++L  LAR  Y     +   +    A+  A         SN+  LRF       VA+  F
Sbjct: 793 RVLNLLARAWYSRGMRERSVQFFQNALEKASAALETESTSNFKNLRFLGVLKYNVALLHF 852

Query: 798 S-ASTLQKTR---RTADEVRSTVAELENAVRVFSHLSAASNLHLHGFD--EKKINTHVEY 851
             A TL++T    RT+  ++  +  L  A+ +   L  + N      +  E++I      
Sbjct: 853 QIAETLRRTGPMLRTSAGMKDALVGLSEALVLLKELLESDNFKTVSKEELEQRIQLGETT 912

Query: 852 CKHLLDAAKIHREAAEREEQQNRQRQEAARQAA--------------------------- 884
            K  L+ A I +EA   EE QN++ +EA  Q A                           
Sbjct: 913 MKSALERAVIEQEAF--EEDQNKKIEEARIQQAKAGEEEEAKRKKAEEEARAAEEKKNEE 970

Query: 885 ---LAEEARRKAEEQKKYLLEKRKLED 908
              L EEAR+  EE++ Y+++++ + D
Sbjct: 971 FRKLQEEARKLMEERESYMVDEKDVND 997


>gi|255717528|ref|XP_002555045.1| KLTH0F19734p [Lachancea thermotolerans]
 gi|238936428|emb|CAR24608.1| KLTH0F19734p [Lachancea thermotolerans CBS 6340]
          Length = 1081

 Score =  130 bits (327), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 227/1012 (22%), Positives = 415/1012 (41%), Gaps = 165/1012 (16%)

Query: 2   ACVYIPVQNSEEEVRVAL-DQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQ-- 58
           A + IP++ SEE V + L + LP D +D+  +L  E +  + WL IA  Y  QG +++  
Sbjct: 17  AILDIPLKESEEVVSIDLQNDLPEDPNDLKTLLVEENSDKEHWLTIAIAYSNQGMIKECI 76

Query: 59  --FRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIET-KQREKEEHFILATQ 115
              +  LE    P+             ++   L   Y  L K +T  + E+E+    +  
Sbjct: 77  SLVKMALEVFQGPQ-----------SASLHTCLTWAYLKLAKEQTGAESEREDSLTQSEH 125

Query: 116 YYNKASRIDMHEPSTWVGKG----QLLLAKGEVEQASSAFKIVLEA-----------DRD 160
           +  +A   D     TWVG       L   + + ++A    +I ++             + 
Sbjct: 126 HLKEAITFD----PTWVGNMLATIDLYYQRRQYDKALETSEIFVKTIYAEDQRQGRQSKP 181

Query: 161 NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAF 220
           NV  LL +A + + +  Y+ SL  ++  L ++P      R+GIG+C ++L     A +++
Sbjct: 182 NVMFLLVRAKLFYQKRNYNVSLRLFQELLVLNPVLQPDPRIGIGMCFWQLKDYKMAIRSW 241

Query: 221 QRALQLDPE--NVEALVAL-----AVMDLQANEA--AGIRKGMEKMQRAFEIYPYCAMAL 271
           +R+L+L+P   N++ L+ L     A  D + +E+        ++++   F       + L
Sbjct: 242 KRSLELNPSNANIKILILLGEFHKAFTDSEDDESFRNNYMNALQQLDGIFATNKQNPVLL 301

Query: 272 NYLANHFFFTGQHFLVEQLTETALAVTNHGPTK---SHSYYNLARSYHSKGDYEKAGLYY 328
                + +  G    V  + E  +     G +    S S +   R+Y+S  +  +A  ++
Sbjct: 302 VLYETYCYLKGDFSKVIDIHEKKIIPLTPGVSNTVLSESSFWCGRAYYSLREPRRAFQHF 361

Query: 329 MASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYV- 387
             S+K      E +   +GLGQ Q++      ++  FE +   + +  E    LG +Y  
Sbjct: 362 QDSLK---ANEENLLARFGLGQTQIQNKLVEESILTFENLYATHENIQELNYILGLLYSG 418

Query: 388 ---------------QLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAF 432
                          +   +EKA   + K  K+        + L    + S+     +++
Sbjct: 419 KCLDAKSRQSIPPNGRAKLLEKAITYMEKYVKLTKAKKNQLVVLKAYTVLSELYHLQNSY 478

Query: 433 KTARTLLKKAGEE--------VPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLL 484
           K +   L +  E+        VP+E+ NN+G  HF  G++E A   F+ +        +L
Sbjct: 479 KQSLECLSRVVEQLSMAGNKIVPLEIYNNLGCFHFINGDWEEARSCFEKS------SKVL 532

Query: 485 DSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAA 544
           DS       D+SA                           +T+ FN  R+ E   D+  A
Sbjct: 533 DS-------DSSAP------------------------TAITIQFNKTRVSES-DDSENA 560

Query: 545 SVLYRLILFKYQDYVDA-----YLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSML 599
              Y  IL  + DYV A     YL+  +   A    Q+   L   +  ++ +   +  + 
Sbjct: 561 EHGYEAILNAHPDYVHARIRCLYLKFMSTKSAELAPQMDKLLQQHSSDLDVRSFYSWFLK 620

Query: 600 GDLELKNDDWVKAKETFRAASDAT--DGKDSYATLSLGNWNYFAALRNEKRAPKLEATH- 656
                  +D  +  ET       T  D  DSYA +SL N  Y    R  KR+   +    
Sbjct: 621 SHATTNANDKSENLETSHNRETLTKYDSHDSYALISLANL-YVTIGRETKRSSSAKEQEK 679

Query: 657 ----LEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQ 712
                 KA +L+ +V+     N++AA G  ++ AE  ++  + ++  +V+++        
Sbjct: 680 SRQSFVKAVQLFQKVLQVDAYNVFAAQGLAIIFAENKRYGPALEILRKVRDSLDNE---- 735

Query: 713 MPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILL-YLARTHYE---AEQWQD 768
              V INL H       +A A++ Y+  L+KF       +LL  L R  Y     E+  +
Sbjct: 736 --SVHINLGHCLLEMQEYAKAIENYEIALKKFTNEESRPLLLNLLGRAWYSRGIRERSLE 793

Query: 769 C-KKSLLRAIHLAPSNYTLRFDAGVAMQKFS--------ASTLQKT---RRTADEVRSTV 816
           C +KSL  A     +    +    V   KF+        A TL+++    RT D++ +  
Sbjct: 794 CFEKSLDYAQQALTAETEKKNSKMVQSVKFNVALLHFQIAETLRRSVPKLRTVDKLEAAR 853

Query: 817 AELENAVRVFSHL--SAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNR 874
           A LE A+ +   L    A+ + +   D++     V+  +  + +A + R  AE+ E + +
Sbjct: 854 AGLETALGLLKELMDQKATIMPIEELDQR-----VQLGETTMKSA-LERCIAEQTEYEEK 907

Query: 875 QRQEAARQAALAEEARRKAEEQKKYLLEKRKLEDEQKRLR--QQEEHFQRVK 924
             ++ A    L EE   K +EQ+K L       +EQ+R+R  QQ + F +++
Sbjct: 908 VSEKLALARKLQEENELKEQEQRKKL-------EEQERVRRAQQTQEFSKLQ 952


>gi|321252636|ref|XP_003192475.1| pol II transcription elongation factor [Cryptococcus gattii WM276]
 gi|317458943|gb|ADV20688.1| Pol II transcription elongation factor, putative [Cryptococcus
           gattii WM276]
          Length = 1118

 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 236/1045 (22%), Positives = 429/1045 (41%), Gaps = 190/1045 (18%)

Query: 2   ACVYIPVQNSEEEVRVALDQLPRD-ASDILDILKAE-QAPLDLWLIIAREYFKQGKVEQF 59
           A V + V     +  V LD L +D  +DI+ ++ A+ ++    W +IA E++++G+  + 
Sbjct: 5   ARVILLVGKGGVQTDVDLDSLAQDEVADIIPVMLADYESECRDWTLIASEHWREGRWNRV 64

Query: 60  RQILEEGSSPEIDEYYADVRYER------IAILNALGVYYTYLG--------------KI 99
             +LE   S     ++   R  R      + I + L   + +L               K+
Sbjct: 65  MDLLERAVS-----FFNGERGRRRDFSSLVNIHSMLAHLHLHLARSAPKVILQNTKYDKL 119

Query: 100 ETKQREKEEHFILATQYYNKASRI-------DMHEP-STWVGKGQLLLAKGEVEQASSAF 151
           +   R K+ H   A    N A+            EP S  +GK    LA G+   A    
Sbjct: 120 DPSTRTKDYHHREAAASLNAATEALRACGGSQEDEPVSLTMGKVIHYLATGQPGLAHPLV 179

Query: 152 KIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLG 211
           + +L+   +N+ AL  QA ++F R  +  +L+ Y++ L + P      R+G+GLC ++LG
Sbjct: 180 ERLLQRQPNNLIALTAQARLQFARRSHLQALQTYQKLLALAPEMSPDPRIGLGLCFWQLG 239

Query: 212 QLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRK---------GMEKMQRAFE 262
              KAR A++RAL+ +P +    + L +  L       + +         G+  +Q+AF+
Sbjct: 240 DRTKARTAWERALEREPGSWVCSLLLGLASLNDARQPSVPRTERLKLETEGVGFVQKAFK 299

Query: 263 I--YPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSK-- 318
           +      +       +     GQ  L  +L E A+    +   K H+   LA S   +  
Sbjct: 300 LNNKSSASALALASVSGQGGQGQLPLASKLAERAI---QYADNKRHAI--LANSERGRLG 354

Query: 319 ---GDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKV------- 368
              GD   AG Y +A++K+ +     I     LGQ+ +K G  R AL   E+        
Sbjct: 355 FMAGDLADAGTY-IAAIKKEDPNAVNIIAELTLGQMAIKSGSLREALNYIEQTAKRLNGQ 413

Query: 369 -----------LEIYP------DNCETLKALG-HIYVQLGQIEKAQELLRKAAKIDP--R 408
                      L  YP      D     + L  ++  ++  +  A E     AK+     
Sbjct: 414 GPLEYTVLHACLLAYPHPGMSHDEVVRNRTLARNMLTEVHNLVGAAETEADWAKLRGVGS 473

Query: 409 DAQAFIDLGELLISSDTGAALDAFKTARTLL--------KKAGEEVP----IEVLNNIGV 456
           D+  F+DL +L    +   A+ A++TA +++        ++ G + P    + + +N+  
Sbjct: 474 DSDVFVDLAKLWQGENVEKAIGAYQTALSIITDNDLESAQEPGLDSPNFTALRLSDNLAA 533

Query: 457 IHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGN 516
           ++  +G  E+A + +++AL                      ++ + K+ ++         
Sbjct: 534 LYHLEGNVETAERMYQEAL-------------------QKVAIQEGKEAEIL-------- 566

Query: 517 HVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAK------ 570
                  K  + +NL R  E+  D   A+  YR +L ++ ++V++  RLA IA       
Sbjct: 567 -------KTVLAYNLGRAYEEGGDHAKAAQWYRDVLRQHPEHVESKARLALIATSAGRHF 619

Query: 571 -ARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSY 629
            A   L+  ++     L +   Y N L  +G      + +    +T R      D  D++
Sbjct: 620 DAHTLLKECLQSDENNLTLRSVYTNFLITIGSY---REAFAFTTQTLR-----IDKSDAW 671

Query: 630 ATLSLGNWNYFAALRNEKRAPKLEATHLE---KAKELYTRVIVQHTSNLYAANGAGVVLA 686
              +LG W +F  L  E ++P+  A   +   ++ E Y R ++       AA G  + L 
Sbjct: 672 TFCALG-WLHF-TLGREGKSPQELAERPKQYLRSAEAYERALIIDPKCAMAAQGLAIALV 729

Query: 687 EKG------QFDVSKDLFTQVQEAASGSVFVQMPD------VWINLAHVYFAQGNFALAM 734
           E         +   +          +  +F ++ D      V +NL H YF +G    A+
Sbjct: 730 EDSLALRGTNYGADEGKVRARLAGQTLGIFGRIKDSLAEGAVNVNLGHCYFVRGEEEKAI 789

Query: 735 KMYQNCLRKFYYNTDAQILLYLARTHY----EAEQWQDCKKSL---LRAIHLAPSNYTLR 787
           + Y      F    D  +LLYLAR  Y        +    K+L     A+H+ P++  + 
Sbjct: 790 ESYMTASNAF-GGKDVNVLLYLARAWYALANRESNFSAMNKALDYCQEAMHIHPADRAIL 848

Query: 788 FDAGVAMQKFSAS--TLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGFDEKKI 845
           ++  +  QK +    +L  ++RT +E+   + + + AV  F  L+   +  L  +D +  
Sbjct: 849 YNIAMIQQKAAEMLFSLDSSKRTLEELTIALKQAQQAVDTFRSLADDKSGPLP-YDAELA 907

Query: 846 NTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEAARQAALAEEARR-KAEEQKKYLLEKR 904
           +    Y + LL      R A E  +Q+  Q +  AR     EEARR +AEEQ +     R
Sbjct: 908 DQRARYGEGLL-----RRAAGEMSKQEAYQGETLAR----VEEARRLRAEEQARI----R 954

Query: 905 KLEDEQK---RLRQQEEHFQRVKAR 926
             E+ ++   R++ +E   QR KAR
Sbjct: 955 AAEEARQAELRIKAEEIAEQRRKAR 979


>gi|374110315|gb|AEY99220.1| FAGR398Wp [Ashbya gossypii FDAG1]
          Length = 1057

 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 235/1029 (22%), Positives = 411/1029 (39%), Gaps = 209/1029 (20%)

Query: 6   IPVQNSEEEVRVALDQ-LPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQILE 64
           IP+++SEE V + L+  LP D +D+  +L  E +  + WL IA  Y     V+   +++E
Sbjct: 17  IPLRDSEEVVSIDLENDLPDDPADLKTLLVEESSDKEHWLTIAAAYCNHEMVDAGIKLIE 76

Query: 65  EGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQRE---KEEHFILATQYYNKAS 121
            G    ++ ++        + L      + YL + + ++ +   +E+H + A Q    A 
Sbjct: 77  MG----LEVFHGTQSAPLYSFLT-----WAYLKQAKRQRLDASVREQHLMQAEQNLKNAI 127

Query: 122 RIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLE-AD-----------------RDNVP 163
             D   PS WVG    +LA  ++      +   LE AD                 R NV 
Sbjct: 128 EFD---PS-WVGN---MLATVDLYYQRDLYDKALETADIFIKKTQDDERRQGKVVRSNVL 180

Query: 164 ALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRA 223
            LL +A + + +  Y+ +L  ++  L + P+     R+GIG+C ++L     A +A++RA
Sbjct: 181 FLLMRAKLLYQKKNYAAALRLFQELLVLDPTLQPDPRIGIGMCFWQLRDTYMAVKAWERA 240

Query: 224 LQLDPENVEA--LVAL-----AVMDLQANE--AAGIRKGMEKMQRAFEIYPYCAMALNYL 274
           LQ++  N  A  LV L     A+ D + +E  A      ++ +   +       + L  L
Sbjct: 241 LQMNKNNRAASILVMLGKFRSALTDSENDERFAEQFTDVLKDLNNLYLDDKENPVLLALL 300

Query: 275 ANHFFFTGQHFLVEQLTETALAVTNHG-----PTKSHSYYNLARSYHSKGDYEKAGLYYM 329
             + +  G +   E++      ++N G        S S +   R+Y+++ DY KA   + 
Sbjct: 301 QTYCYLVGDY---EKVISLYQEISNWGYLVGTSVLSESAFWCGRAYYARQDYRKAFSLFQ 357

Query: 330 ASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYV-- 387
            +++   K  + +   +GLGQ Q++      ++  FE + +      E    LG +Y   
Sbjct: 358 EALR---KNEDNLLAKFGLGQTQIQNNLVEESILTFENIYKTQEGIQELNYILGLLYSAK 414

Query: 388 -------------QLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKT 434
                        +   +EK+   L K  K+        + L   L+ S+       +K 
Sbjct: 415 CFDDGFSKLAAKEKASLVEKSISFLEKYIKLTTVKKNQLVALKAYLVLSELYELQTRYKD 474

Query: 435 ARTLLKKA--------GEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDS 486
           +   L KA         E +P+E+ NN+G  HF  G+   A + F+DA  D I +T  D+
Sbjct: 475 SLECLTKAVDQWNAANTERIPVEISNNLGCFHFINGDIGLAKKYFQDA-SDSI-VTAEDA 532

Query: 487 KTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASV 546
           KT                                     TV +N+AR +E       +  
Sbjct: 533 KTIG----------------------------------TTVKYNIARTVESEE-PETSET 557

Query: 547 LYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLEL-- 604
           +Y+ IL  +  YV A +R   +   +    L  E +++ LK N           DLE+  
Sbjct: 558 MYQEILSAHAGYVQARIRTIFLKYMKTKTDLYAEELDQLLKQNE---------SDLEVRS 608

Query: 605 ------------KNDDWVKAKET--FRAASDATDGKDSYATLSLGNWNYFAALRNEKRA- 649
                       K D   + KE    R      D  D YA +SL N     A   +K A 
Sbjct: 609 FYSWYIKNVAVEKTDSKGENKEIKHNRETLTKYDSHDLYALISLANMYVSIAKETKKSAN 668

Query: 650 PKLEATHLE---KAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAAS 706
           PK +    +   KA +L+ +V+     N++AA G  ++ AE  +F  S D+  +V+++  
Sbjct: 669 PKEQDKSRQSFLKAVQLFQKVLQIDPLNIFAAQGLAIIFAESKRFGQSLDILRKVRDSLD 728

Query: 707 GSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEA--- 763
                   DV +NLAH      +F  A++ Y+  + +F    +   LL L    + +   
Sbjct: 729 NE------DVHMNLAHCLLEMKDFVKAIENYEITITRFENIENKSTLLNLLGFAWYSRGL 782

Query: 764 -EQWQDC--------KKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTL----QKTRRTAD 810
            E+  DC        K++L        S  T  F   VA  +F  + +    Q   RT  
Sbjct: 783 KEKSLDCFLKALQYTKEALALEQEKPESRLTSGFMFNVAFVEFQVAEVLRRSQPKERTLA 842

Query: 811 EVRSTVAELENAVRVFSHLSAASNLHLHG--------FDEKKINTHVEYCKHLLDAAKIH 862
           ++ ++V+ L+ AV +   L++       G          E  +N  +E C          
Sbjct: 843 QLEASVSGLQEAVSLLKQLASQQGSVGAGDELQQRIQLGEGTMNNALERC---------I 893

Query: 863 REAAEREEQQNRQRQEAAR------------QAAL-----------AEEARRKAEEQKKY 899
           +E  E E++++ +   A +            Q+AL           AEE RR  EE ++ 
Sbjct: 894 KEQKEYEQERDNKLATAKKIMKEEEEKERERQSALEEEERIKRERQAEEFRRLQEEAQRL 953

Query: 900 LLEKRKLED 908
           + E+  L+D
Sbjct: 954 IEERASLDD 962


>gi|45201494|ref|NP_987064.1| AGR398Wp [Ashbya gossypii ATCC 10895]
 gi|44986428|gb|AAS54888.1| AGR398Wp [Ashbya gossypii ATCC 10895]
          Length = 1057

 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 235/1029 (22%), Positives = 411/1029 (39%), Gaps = 209/1029 (20%)

Query: 6   IPVQNSEEEVRVALDQ-LPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQILE 64
           IP+++SEE V + L+  LP D +D+  +L  E +  + WL IA  Y     V+   +++E
Sbjct: 17  IPLRDSEEVVSIDLENDLPDDPADLKTLLVEESSDKEHWLTIAAAYCNHEMVDAGIKLIE 76

Query: 65  EGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQRE---KEEHFILATQYYNKAS 121
            G    ++ ++        + L      + YL + + ++ +   +E+H + A Q    A 
Sbjct: 77  MG----LEVFHGTQSAPLYSFLT-----WAYLKQAKRQRLDASVREQHLMQAEQNLKNAI 127

Query: 122 RIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLE-AD-----------------RDNVP 163
             D   PS WVG    +LA  ++      +   LE AD                 R NV 
Sbjct: 128 EFD---PS-WVGN---MLATVDLYYQRDLYDKALETADIFIKKTQDDERRQGKVVRSNVL 180

Query: 164 ALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRA 223
            LL +A + + +  Y+ +L  ++  L + P+     R+GIG+C ++L     A +A++RA
Sbjct: 181 FLLMRAKLLYQKKNYAAALRLFQELLVLDPTLQPDPRIGIGMCFWQLRDTYMAVKAWERA 240

Query: 224 LQLDPENVEA--LVAL-----AVMDLQANE--AAGIRKGMEKMQRAFEIYPYCAMALNYL 274
           LQ++  N  A  LV L     A+ D + +E  A      ++ +   +       + L  L
Sbjct: 241 LQMNKNNRAASILVMLGKFRSALTDSENDERFAEQFTDVLKDLNNLYLDDKENPVLLALL 300

Query: 275 ANHFFFTGQHFLVEQLTETALAVTNHG-----PTKSHSYYNLARSYHSKGDYEKAGLYYM 329
             + +  G +   E++      ++N G        S S +   R+Y+++ DY KA   + 
Sbjct: 301 QTYCYLVGDY---EKVISLYQEISNWGYLVGTSVLSESAFWCGRAYYARQDYRKAFSLFQ 357

Query: 330 ASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYV-- 387
            +++   K  + +   +GLGQ Q++      ++  FE + +      E    LG +Y   
Sbjct: 358 EALR---KNEDNLLAKFGLGQTQIQNNLVEESILTFENIYKTQEGIQELNYILGLLYSAK 414

Query: 388 -------------QLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKT 434
                        +   +EK+   L K  K+        + L   L+ S+       +K 
Sbjct: 415 CFDDGFSKLAAKEKASLVEKSISFLEKYIKLTTVKKNQLVALKAYLVLSELYELQTRYKD 474

Query: 435 ARTLLKKA--------GEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDS 486
           +   L KA         E +P+E+ NN+G  HF  G+   A + F+DA  D I +T  D+
Sbjct: 475 SLECLTKAVDQWNAANTERIPVEISNNLGCFHFINGDIGLAKKYFQDA-SDSI-VTAEDA 532

Query: 487 KTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASV 546
           KT                                     TV +N+AR +E       +  
Sbjct: 533 KTIG----------------------------------TTVKYNIARAVESEE-PETSET 557

Query: 547 LYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLEL-- 604
           +Y+ IL  +  YV A +R   +   +    L  E +++ LK N           DLE+  
Sbjct: 558 MYQEILSAHAGYVQARIRTIFLKYMKTKTDLYAEELDQLLKQNE---------SDLEVRS 608

Query: 605 ------------KNDDWVKAKET--FRAASDATDGKDSYATLSLGNWNYFAALRNEKRA- 649
                       K D   + KE    R      D  D YA +SL N     A   +K A 
Sbjct: 609 FYSWYIKNVAVEKTDSKGENKEIKHNRETLTKYDSHDLYALISLANMYVSIAKETKKSAN 668

Query: 650 PKLEATHLE---KAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAAS 706
           PK +    +   KA +L+ +V+     N++AA G  ++ AE  +F  S D+  +V+++  
Sbjct: 669 PKEQDKSRQSFLKAVQLFQKVLQIDPLNIFAAQGLAIIFAESKRFGQSLDILRKVRDSLD 728

Query: 707 GSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEA--- 763
                   DV +NLAH      +F  A++ Y+  + +F    +   LL L    + +   
Sbjct: 729 NE------DVHMNLAHCLLEMKDFVKAIENYEITITRFENIENKSTLLNLLGFAWYSRGL 782

Query: 764 -EQWQDC--------KKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTL----QKTRRTAD 810
            E+  DC        K++L        S  T  F   VA  +F  + +    Q   RT  
Sbjct: 783 KEKSLDCFLKALQYTKEALALEQEKPESRLTSGFMFNVAFVEFQVAEVLRRSQPKERTLA 842

Query: 811 EVRSTVAELENAVRVFSHLSAASNLHLHG--------FDEKKINTHVEYCKHLLDAAKIH 862
           ++ ++V+ L+ AV +   L++       G          E  +N  +E C          
Sbjct: 843 QLEASVSGLQEAVSLLKQLASQQGSVGAGDELQQRIQLGEGTMNNALERC---------I 893

Query: 863 REAAEREEQQNRQRQEAAR------------QAAL-----------AEEARRKAEEQKKY 899
           +E  E E++++ +   A +            Q+AL           AEE RR  EE ++ 
Sbjct: 894 KEQKEYEQERDNKLATAKKIMKEEEEKERERQSALEEEERIKRERQAEEFRRLQEEAQRL 953

Query: 900 LLEKRKLED 908
           + E+  L+D
Sbjct: 954 IEERASLDD 962


>gi|363748733|ref|XP_003644584.1| hypothetical protein Ecym_2007 [Eremothecium cymbalariae
           DBVPG#7215]
 gi|356888217|gb|AET37767.1| Hypothetical protein Ecym_2007 [Eremothecium cymbalariae
           DBVPG#7215]
          Length = 1113

 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 187/816 (22%), Positives = 340/816 (41%), Gaps = 148/816 (18%)

Query: 6   IPVQNSEEEVRVALDQ-LPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQILE 64
           IP+++SEE V + L+  LP D +D+  +L  E++  + WL I   Y   G VE   +++E
Sbjct: 18  IPLRDSEEVVSIDLENDLPEDPADLKTLLVEERSDKEHWLTIGVAYCNHGMVEAGIKLIE 77

Query: 65  EG----SSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKA 120
                   P+    Y  + +  + +  +    ++           +E+H I A Q  N  
Sbjct: 78  MAFEVLQGPQSASLYGFLTWAYLKLAKSNITDFSL----------REQHLIQAEQ--NLR 125

Query: 121 SRIDMHEPSTWVGK--------------------GQLLLAKGEVEQASSAFKIVLEADRD 160
           S I+ ++PS WVG                       + + KG+ +          +  R 
Sbjct: 126 SAIE-YDPS-WVGNMLATVDLYYQRNFYDKALETADIFIKKGQEDDKRQG-----KPSRL 178

Query: 161 NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAF 220
           NV  LL +A + + +  Y+ SL  ++  L + P+     R+GIGLC ++L     A +++
Sbjct: 179 NVLFLLMRAKLLYQKKNYAASLRLFQELLVLDPTLDPDPRIGIGLCFWQLKDSSMAIKSW 238

Query: 221 QRALQLDPENVEALV---------ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMAL 271
           +RALQL+ +N  A +         AL V +            +  ++  F       + L
Sbjct: 239 ERALQLNHKNRTARILVMLGNFRNALTVSENDQQFVDQFTDVLSDLKNIFVENRETPVLL 298

Query: 272 NYLANHFFFTGQHFLV-----EQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGL 326
             L  +++ TG +  V     +++++ A  V N     S S +   R+Y++K D+ +A  
Sbjct: 299 VLLQFYYYLTGNYDNVIAIYEKKISQWAPLVAN--TILSDSAFWCGRAYYAKSDFRRAFS 356

Query: 327 YYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIY 386
            +  S++   +  + +   +GLGQ QL+   F  ++  FE + +      E    LG +Y
Sbjct: 357 MFQESLR---RNEDNLLAKFGLGQSQLQNKLFEESILTFENIYKTQESIQELNYILGLLY 413

Query: 387 ---------VQLGQIEKAQ------ELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDA 431
                     +L   EK+         L K  K+        + +   L+ S+       
Sbjct: 414 SAKCFDNQFSKLSAKEKSSLVGKSINFLEKYIKLTTAKKNQLVAVKAYLVLSELYELQTQ 473

Query: 432 FKTARTLLKKAG--------EEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTL 483
           +K +   L KA         E++ +E+ NN+G  HF  G+ +SA + F++A         
Sbjct: 474 YKQSLQYLSKAVDQWKYSGLEDISLEISNNLGCFHFINGDIKSARKYFQEAF-------- 525

Query: 484 LDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVA 543
                     DA +S                 NH  +  ++ TV +N+AR  E   D   
Sbjct: 526 ----------DAISST----------------NHKNI--SETTVKYNIARAAES-EDPEK 556

Query: 544 ASVLYRLILFKYQDYVDAYLRLAAIA-------KARNNLQLSIELVNEALKVNGKYPNAL 596
           +  LY+ IL ++  YV A +R   +        K   +L+  +E  +  L+V   Y   L
Sbjct: 557 SMSLYQQILSEHPGYVQAKIRSIFLKYLEDKEDKFATDLEELLEQNDSDLEVRSFYSWYL 616

Query: 597 SMLGDLELKNDDWVKAKET--FRAASDATDGKDSYATLSLGNWNYFAALRNEKRAP---- 650
             +     KND   + +ET   R      D  D YA +SL N  Y    R+ K++     
Sbjct: 617 KNVS--REKNDANGEDRETKHNRETLTKYDSHDLYALISLAN-QYVTIARDTKKSSSQKE 673

Query: 651 --KLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGS 708
             K + + L KA +L+ +V+     N++AA G  ++ A+  +F  + ++  +V+++    
Sbjct: 674 QDKSKQSFL-KAVQLFQKVLQIDPLNIFAAQGLAIIFADSKRFGQALEILRKVRDSLDNE 732

Query: 709 VFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKF 744
                 DV +NLAH      +F  +++ Y+  L +F
Sbjct: 733 ------DVHLNLAHCLLEMKDFVKSIENYEITLSRF 762


>gi|50308067|ref|XP_454034.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49643169|emb|CAG99121.1| KLLA0E01915p [Kluyveromyces lactis]
          Length = 1073

 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 235/991 (23%), Positives = 408/991 (41%), Gaps = 174/991 (17%)

Query: 6   IPVQNSEEEVRVAL-DQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQILE 64
           IP++ SEE V + L + LP D  D+  +L  EQ+  + WL IA  Y   G V++  ++ E
Sbjct: 18  IPLRESEEVVSIDLKNDLPEDPQDLTTLLVEEQSDKEHWLTIAASYCNNGSVKEGVKLAE 77

Query: 65  EGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETK-QREKEEHFILATQYYNKASRI 123
           +  S   D+  A       +I   L   Y  L +  T    E+ ++  LA  +  +AS+ 
Sbjct: 78  QALSHFSDKQTA-------SIHTFLTWAYLRLARSSTGIVEERNKYLSLAETHVIEASKQ 130

Query: 124 DMHEPSTWVGKG----QLLLAKGEVEQASSAFKIVLEADRD-----------NVPALLGQ 168
           D     TW+G      +L   +G  ++A     I +++ +D           N+  ++ +
Sbjct: 131 D----PTWIGNRLATVELYFQRGMYDRALEYTDIFIKSVQDEDKRSGSVNKPNIMFIIMR 186

Query: 169 ACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDP 228
           A + + +  Y  +L  ++  L ++P+     R+GIG+C + L     A  A++R+  +  
Sbjct: 187 AKLMYIKKNYHGALRLFQELLLLNPTLVPDPRIGIGMCFWHLKDRSMAIAAWERSAAVSG 246

Query: 229 ENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAM--------ALNYLANHFFF 280
           ++  A + + +     +  +     M K      +     +         L  L   +F+
Sbjct: 247 KDSVAAILVLLGKFHNSLTSSTNDEMFKTSFTNAVLDLDTLYQERGPHPVLLALLQVYFY 306

Query: 281 TGQHF-----LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEI 335
             Q +     + EQ   +  A+ +       S++ + R+Y+++GD  KA  Y+  ++K  
Sbjct: 307 MNQKYDKVITIYEQKIMSRSAMISDQILSESSFW-VGRAYYAQGDSRKAFHYFQEALK-- 363

Query: 336 NKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYV-------- 387
            K    +    GLGQ Q+K      ++  FE + +      E    LG +Y         
Sbjct: 364 -KNEGNLLAKIGLGQSQVKNNLVEESILTFENIYQSNESLQEINYILGLLYASKCFNTTV 422

Query: 388 -----QLGQI-EKAQELLRKAAKIDPRDA------QAFIDLGELL-ISSDTGAALDAFKT 434
                +L +I +KA + L K   +           +A++ L EL  I ++   ++D  + 
Sbjct: 423 KVSSAELRKITDKAIQFLEKYVHLTKAKGNQIVINKAYLLLSELYEIKNNYKQSIDYLQK 482

Query: 435 ARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVID 494
               L   GEE P+EVLNN+G  +F  GE+E A   F++A    I   + DSK       
Sbjct: 483 GIDQLHIQGEETPLEVLNNLGCFYFVTGEYEKAQNLFQEASAKVI---VHDSK------- 532

Query: 495 ASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFK 554
                                        KVT+ +N AR LE   D   +  +Y  IL  
Sbjct: 533 -----------------------------KVTLDYNTARALEHT-DKAKSHDIYTAILTD 562

Query: 555 YQDYVDAYLR---LAAIAKARNNLQLSIELVNEALKVNGK----YPNALSMLGDLELKND 607
           +  Y+ A +R   L  I    +NL+  I+ V    + NG+    Y   L  LG    +++
Sbjct: 563 HPKYISARIRDIHLKFINHPESNLKDEIKSVLTENESNGEVRAFYAWYLKKLGK-PAEHE 621

Query: 608 DWVKAKETFRAASDATDGKDSYATLSLGNWNYFA-------ALRNEKRAPKLEATHLEKA 660
               +KET        D  D YA +SL N  Y A       + RN K A K   ++L KA
Sbjct: 622 MSEHSKETLVK----YDSHDLYALISLANL-YVAIARDQKKSARNSKDANKSIESYL-KA 675

Query: 661 KELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINL 720
            +LY +V+     N++AA G  ++ AE  ++  S ++  +++++           V INL
Sbjct: 676 TQLYQKVLQVDPMNIFAAQGLAIIFAENKRYGQSLEVLRKIRDSLDNQ------SVHINL 729

Query: 721 AHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILL-YLARTHY-------EAEQWQDCKKS 772
            H       +A A++ Y+  L +F       +LL  L R  Y         E  Q     
Sbjct: 730 GHCLSEMREYAKAIENYEIALNRFDNPKSKPLLLNLLGRCWYLRALKERSLEAVQKALGY 789

Query: 773 LLRAIHLAPS----NYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSH 828
           + RA  L  +      T  +   +A+ +F  +  ++ RR++ + R T+A+LE ++    +
Sbjct: 790 VKRAYDLESAKVNGKMTSSYKFNLALLEFQVA--EQMRRSSPKER-TMADLEASIEGLQY 846

Query: 829 LSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEAARQAALAEE 888
                               +   K LL+   I   + + E  Q  Q  E   + AL   
Sbjct: 847 -------------------GISLLKELLETKSIVIPSEQLE--QRIQLGETTMKTAL--- 882

Query: 889 ARRKAEEQKKYLLE-KRKLEDEQKRLRQQEE 918
             R  E+QK Y LE   K+E+ +K L +Q E
Sbjct: 883 -ERSIEDQKAYELEISAKMENARKVLEEQRE 912


>gi|308802694|ref|XP_003078660.1| TPR-containing nuclear phosphoprotein that regulates K(+) uptake
           (ISS) [Ostreococcus tauri]
 gi|116057113|emb|CAL51540.1| TPR-containing nuclear phosphoprotein that regulates K(+) uptake
           (ISS) [Ostreococcus tauri]
          Length = 332

 Score =  125 bits (315), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 99/355 (27%), Positives = 171/355 (48%), Gaps = 32/355 (9%)

Query: 254 MEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPT---KSHSYYN 310
           M  ++RAF + P+     N +A++   + ++  VE LT  A  + N+G +   ++ + +N
Sbjct: 1   MRLLERAFSLDPHNQAVNNAIADNLLMSEEYDKVEALTRAA--IQNNGESARNRAKAAFN 58

Query: 311 LARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLE 370
            AR+ H++G   +A   Y A+ +       ++ PY+GLGQ+ L   D ++A ++  K  +
Sbjct: 59  QARALHARGAIPQAKALYGAATQ---LDESYVPPYFGLGQIALAAHDVKTAWSHMNKAHK 115

Query: 371 IYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALD 430
            + ++    +   H+    G+ E+A E+ R+  K    D +A ++LGELL   D   +L 
Sbjct: 116 EFGESITVTRMFAHLCASTGKSEQAAEMFREVVKQGGSDLEAMLELGELLEEEDPKGSLK 175

Query: 431 AFKTARTLLKKAGEEVPIEVL-NNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTK 489
           A++ A  +L   GE+ P+  + NNIGV+  + G+F+ A ++F  AL              
Sbjct: 176 AYRAALKILDARGEDGPLTAIHNNIGVMSSQLGKFDEAREAFTKAL-------------- 221

Query: 490 TYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYR 549
                     L     QL  + +       LP    ++ FNLA L E   D  AA   Y 
Sbjct: 222 --------ESLGGDSDQLAGKLKGANAKKVLPPGVASIAFNLALLEENQGDNAAAETRYN 273

Query: 550 LILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLEL 604
            +L    DY+D+ LR A I   R +  L++E  NEA+       +A++ LG L+L
Sbjct: 274 ALLMAQPDYIDSILRQAKIRAERGDYDLALERTNEAIVAKSDSADAVA-LGWLDL 327


>gi|392577115|gb|EIW70245.1| hypothetical protein TREMEDRAFT_68569 [Tremella mesenterica DSM
           1558]
          Length = 1175

 Score =  125 bits (315), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 215/977 (22%), Positives = 394/977 (40%), Gaps = 174/977 (17%)

Query: 29  ILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQILEEGSSPEIDEYYADV--RYERIAIL 86
           I D+L    A    W +IA E++++ +  +   +L++G    I  +   V    + +A++
Sbjct: 45  IPDLLADYSAECRDWTLIAGEHWRRSRWSRAEDLLQKG----IHFFTGGVGRPTDHMALV 100

Query: 87  N-----------------ALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDM---- 125
           N                  + + +    K+ +  + KE+HF  A    NKA +  M    
Sbjct: 101 NLHAMLAHLHLALSRTAPKVSLPHAKYDKLPSNVKVKEDHFTEAAANLNKADQALMASGA 160

Query: 126 ---HEP-STWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDS 181
               EP +  +GK  L LA+G+   A    + +L    +N+ AL   A ++F R  +  +
Sbjct: 161 GPDDEPIAVPMGKIILYLARGQPGTAQPMVERLLRRQPNNLVALTAHARLQFARRAHEQA 220

Query: 182 LEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEA--LVALAV 239
           L+ Y++ L + P      R+GIGLC + LG   KAR A++RALQ DP +     L   A 
Sbjct: 221 LQTYQKLLSLDPEMRPDPRIGIGLCLWMLGDKQKARLAWERALQRDPSSWTCMLLTGFAA 280

Query: 240 MDLQANEAAG-------IRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTE 292
           ++     A         I +G+  +Q AF++    A A   LA+     GQ  +  +L E
Sbjct: 281 LNTAREPATAEDDRAQLIAEGVAYVQSAFKLNNKNAAAALTLASVSGQNGQTAVASKLAE 340

Query: 293 TALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLY----YMASVKEINKPHEFIFPYYGL 348
            A+    +   K H+   LA +   +  +    L     ++ + ++ +     I     L
Sbjct: 341 RAI---QYADNKRHAV--LANTERGRMGFIMQDLVDATPFLTAARQDDGGVPNILADLTL 395

Query: 349 GQVQLKLGDFRSALTNFEKV------------------LEIYPDNCETLKALGH------ 384
            Q+ ++ G+ R AL   + +                  L  YP    +   L        
Sbjct: 396 AQIAIQGGNLREALNFMDGLTPRLVGKGPMEYVVMHASLLAYPHPGMSSAELASNRSKAR 455

Query: 385 -IYVQLGQIEKAQELLRKAAKID--PRDAQAFIDLGELLISSDTGAALDAFKTA-----R 436
            +  +L  + ++ E     AK+     D   F+DL ++        A+ A++TA      
Sbjct: 456 AMLTELHSVIQSAETDEDMAKVRHIADDTDVFLDLAKMWQKESLEKAIGAYQTAVSGRVE 515

Query: 437 TLLKKAGE----EVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYV 492
           T++ + GE    +  +++ +N+G ++  +G  ++A + +++AL                 
Sbjct: 516 TIVDEGGEVEVDQRAVKMSSNLGALYQLQGNADTAERMYQEAL----------------- 558

Query: 493 IDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLIL 552
                            R  N+    E    +  + FNL R  E+  +T  AS  YR +L
Sbjct: 559 ----------------QRLGNEAGK-EAEEMRTILAFNLGRAYEEAGETTKASQWYRDVL 601

Query: 553 FKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALK-------VNGKYPNALSMLGDLELK 605
            ++ +++++ +RLA IA A      +  L+ E LK       +   Y + L  LG L   
Sbjct: 602 RQHPEHMESKVRLACIAAAAGRNFDAHTLLKECLKSDESNITLRSTYTHFLISLGSL--- 658

Query: 606 NDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKL--EATHLEKAKEL 663
                K    F + +   +  D +   +LG W +F   R  K   +L        ++ E 
Sbjct: 659 -----KEALAFTSQTLKLERADVFTYCALG-WIHFTLGREAKSTSELAERTKQYLRSAEA 712

Query: 664 YTRVIVQHTSNLYAANGAGVVLAEK--------GQFDVSKDLFTQVQEAASG-SVFVQMP 714
           Y R +    +   AA G  + LAE              ++++  +++ A     VF ++ 
Sbjct: 713 YERALTLDPACAMAAQGLAIALAEDTLALKPLGAAVGTAEEMKARMRLAGQALGVFSRIA 772

Query: 715 D------VWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHY----EAE 764
           D      V +N+ H +F +G    A++ Y+      +   +  +LLYLAR  Y       
Sbjct: 773 DSIQEGSVHVNIGHSFFVRGEEDKAIQSYE-AADNHHKGRNVPVLLYLARAWYAYANRES 831

Query: 765 QWQDCKKSLL---RAIHLAPSNYTLRFDAGVAMQKFSAS--TLQKTRRTADEVRSTVAEL 819
            +    K+L    RA+H+ P++  + ++  +  QK +     L+ ++RT +E+   + + 
Sbjct: 832 NFSAMSKALSFCQRAMHIQPNDRAILYNIAMIQQKAAEMLFGLEPSKRTLEELHVALRQA 891

Query: 820 ENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEA 879
           + A   F  L  A +     +D    +    Y   LL  A          +Q +RQ    
Sbjct: 892 QQAANTFRAL--AEDRGALPYDPDLADQRARYGDTLLRRAP---------DQLSRQESFE 940

Query: 880 ARQAALAEEARR-KAEE 895
           A   A  +EARR +AEE
Sbjct: 941 AEAQARVQEARRIRAEE 957


>gi|392594216|gb|EIW83541.1| RNA polymerase II-associated protein [Coniophora puteana RWD-64-598
           SS2]
          Length = 1123

 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 108/403 (26%), Positives = 188/403 (46%), Gaps = 39/403 (9%)

Query: 10  NSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQI----LEE 65
             +E + + L  L  +  D+L++L+  Q  + +W  +A EY+++G +E   +I    LE 
Sbjct: 16  GGQEIITIDLADLDSNPEDVLELLREGQCKVSVWARLASEYWRKGHLEAAERIANAALES 75

Query: 66  ----GSSPEIDEYYA-----DVRYERIAI-LNALGVYYTYLGKIETKQREKEEHFILATQ 115
               G S +    Y+      + Y R A  L+  GV    L    T +R KEE+   A Q
Sbjct: 76  LQSNGQSAQSQPIYSLLANIQIAYARQAPKLHLPGVREDVL----TGERTKEEYHREAAQ 131

Query: 116 YYNKASRIDMHEPSTWVGKGQLLLAKG-------EVEQASSAFKIVLEADRDNVPALLGQ 168
           Y N   R+   E    VG     L +G        +E A  +F+ VL     N+ AL+G+
Sbjct: 132 YLNMGDRV-AAEGGESVGGALSFLTRGIHQFATRSMEDALRSFEGVLAEKPTNLVALMGK 190

Query: 169 ACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDP 228
           A + + R +Y  +L+ +++ LQ++P C    R+GIGLC + +    KAR A+ R+ +++P
Sbjct: 191 ARLLYARRQYPQALKLFQQILQLNPRCLPDPRIGIGLCLWAMDHKAKARSAWLRSAEVNP 250

Query: 229 E--NVEALVALAVMDLQANE-------AAGIRKGMEKMQRAFEIYPYCAMALNYLANHFF 279
              + + L+ L  ++   NE       A   R G + ++RAF+     A A N L   F 
Sbjct: 251 TQWSTQLLLGLEAINASKNESRPEEERANSFRVGTKHIERAFKTNNKSAAAANVLCELFV 310

Query: 280 FTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPH 339
             G +    +L E  +   +  P  +  Y   AR  H++G   +A   +M + +   +PH
Sbjct: 311 RKGNYKTALKLAERTIQFADTLPVVTEGYIRTARVLHAQGHVPEATRLFMTAAE--GQPH 368

Query: 340 EFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKAL 382
             I    GL Q Q + G+  +A+   + +++  P+  ++  AL
Sbjct: 369 -HILGAIGLAQTQTQSGEIAAAIHTLDTLVQP-PNPTKSADAL 409



 Score = 72.8 bits (177), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 124/552 (22%), Positives = 230/552 (41%), Gaps = 97/552 (17%)

Query: 430  DAFKTARTLLKKAG-EEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKT 488
            DA + +       G E V   ++NN+  +    G  E A + ++DAL             
Sbjct: 518  DALRVSEVAAAVGGAERVDPRLVNNLAALAHMDGALEEAQRMYEDAL------------- 564

Query: 489  KTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLY 548
                I ASA + Q  D     R + +G  +       T+L+NLAR+ E   D   A   Y
Sbjct: 565  ----IKASA-LAQQGDA----REKQNGEAM-----ATTMLYNLARVYEDSGDLERAKEAY 610

Query: 549  RLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKY-------------PNA 595
              +L ++ +Y+DA +RLA +    +    + +L+ +AL     +               A
Sbjct: 611  DKLLARHPEYIDAKIRLADMLYKSHQSNEAHDLLKQALTSQPSHLTLRAYYTHFLVSSAA 670

Query: 596  LSMLGDLELKNDDWVKAKETFRAASDATDGK-DSYATLSLGNWNYFAALRNEKRAPKLEA 654
             +  G + ++    ++A   F  A+ +   K D YA  +    +Y   +  E   P L+ 
Sbjct: 671  PTTFGQVHMQP---LRAAYNFVYATLSDHNKHDVYAHCAAALVHYM--MNREMLRPPLDP 725

Query: 655  THLEKAK-------ELYTRVIVQHTSNLYAANGAGVVLAEK------------GQFDVSK 695
              L + K       E Y + +V       AA G  +V AE             G  D ++
Sbjct: 726  AQLAERKKGFVRSAEFYDKALVLDPCCAVAAQGLAIVTAEDALGSLVGAGHSAGSADEAQ 785

Query: 696  ----------DLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFY 745
                      ++F +++E+ S        DV++N+ H Y+ + +F  A++ Y+    +F+
Sbjct: 786  RRVRSARDALEVFAKIRESISTG------DVYVNMGHCYYVREDFDRALESYETASSRFF 839

Query: 746  YNTDAQILLYLARTHY---EAEQWQDCKKSLLR----AIHLAPSNYTLRFDAGVAMQKFS 798
             N +A +L+   R  Y     +Q     KS L+    A  L P +    ++  V  QK +
Sbjct: 840  DNKNANVLMQQCRAWYAKANKDQSYASMKSALKYAEMARALEPEDKATTYNIAVIQQKAA 899

Query: 799  AS--TLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLL 856
                 +   +R+  E+   + + +   + F  L+A  +  +  +D +     ++Y + +L
Sbjct: 900  ELLFNIPPAKRSVAELEEAIEQAKQGNKAFGELTADPSAAVP-YDRELAEQRMKYGEGML 958

Query: 857  DAAKIHREAAEREEQQNRQRQEAARQAALAEEARRKAEEQKKYLLEKRKLEDE---QKRL 913
              A+       + E + R++ +A RQ  L E  R +A E++K   ++R++E E   + R 
Sbjct: 959  RRAEEQIANQRQFEDEAREKLDAVRQRRLEERLRLEAIEKEKE--DQRRVEAEALRETRK 1016

Query: 914  RQQEEHFQRVKA 925
            RQQEE  + +K 
Sbjct: 1017 RQQEEAAEWMKG 1028


>gi|58263296|ref|XP_569058.1| Pol II transcription elongation factor [Cryptococcus neoformans
           var. neoformans JEC21]
 gi|134108682|ref|XP_776994.1| hypothetical protein CNBB5210 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50259677|gb|EAL22347.1| hypothetical protein CNBB5210 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57223708|gb|AAW41751.1| Pol II transcription elongation factor, putative [Cryptococcus
           neoformans var. neoformans JEC21]
          Length = 1186

 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 249/1040 (23%), Positives = 430/1040 (41%), Gaps = 210/1040 (20%)

Query: 17  VALDQLPRD-ASDILDILKAE-QAPLDLWLIIAREYFKQGKVEQFRQILEEGSSPEIDEY 74
           V LD L +D  +DI+ ++ A+ ++    W +IA E++++G+  +   +LE   S     +
Sbjct: 20  VDLDSLAQDEVADIIPVMLADYESECRDWTLIASEHWREGRWNRVMDLLERAVS-----F 74

Query: 75  YADVRYER------IAILNALGVYYTYLGK------------------IETK---QREKE 107
           +   R  R      I I + L   + +L +                  I TK    RE  
Sbjct: 75  FNGERGRRRDSASLINIHSMLAHLHLHLARSAPKVILQNAKYDKLDPSIRTKDYHHREAA 134

Query: 108 EHFILATQYYNKASRIDMHEP-STWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALL 166
                AT+    +      EP S  +GK    LA G+   A    + +L+   +N+ AL 
Sbjct: 135 ASLNAATEALRASGGSQEDEPVSLTMGKVIHYLATGQPGLAHPLVERLLQRQPNNLMALT 194

Query: 167 GQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQL 226
            QA ++F R  +  +L+ Y++ L + P      R+G+GLC ++LG   KAR A++RAL+ 
Sbjct: 195 AQARLQFARRSHLQALQTYQKLLTLAPEMSPDPRIGLGLCFWQLGDRAKARTAWERALER 254

Query: 227 DPENVEALVALAVMDLQANEAAGIRK---------GMEKMQRAFEIYPYCAMALNYLANH 277
           +P +   L+ L +  L       I +         G+  +Q+AF++    + +   LA+ 
Sbjct: 255 EPGSWVCLLLLGLASLNDARQPSIPRTERLKLETEGVGFVQKAFKLNNKSSASALALASV 314

Query: 278 FFFTGQH--FLVEQLTETALAVTNHGPTKSHSYYNLARSYHSK-----GDYEKAGLYYMA 330
               GQ    L  +L E A+    +   K H+   LA S   +     GD   AG Y +A
Sbjct: 315 SGQGGQSQLPLASKLAERAV---QYADNKRHAV--LANSERGRLGFMAGDLADAGTY-IA 368

Query: 331 SVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKV------------------LEIY 372
           +VK+ +     I     LGQ+ +K G+ R AL   E+                   L  Y
Sbjct: 369 AVKKEDPNAVNIIAELTLGQMAIKSGNLREALNYIEQTAKRLNGQGPLEYTVLHACLLAY 428

Query: 373 P------DNCETLKALG-------HIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGEL 419
           P      D     + L        H  V   + E     LR        DA  F+DL +L
Sbjct: 429 PHPGMSHDEVVRNRTLARNMLTEVHNLVASAETEADWAKLRGVGS----DADVFVDLAKL 484

Query: 420 LISSDTGAALDAFKTARTLL--------KKAGEEVP----IEVLNNIGVIHFEKGEFESA 467
               +   A+ A++TA +++        ++ G + P    + + +N+G ++  +G  E+A
Sbjct: 485 WQGENVEKAIGAYQTALSIITDNDLDSAQEPGLDPPSFTALRLSDNLGALYHLEGNVETA 544

Query: 468 HQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTV 527
            + +++AL           K  T                       +G   E    K  +
Sbjct: 545 ERMYQEAL----------QKIAT----------------------QEGKEAETL--KTVL 570

Query: 528 LFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALK 587
            +NL R  E+  D   A+  YR +L ++ ++V++ +RLA IA +      +  L+ E L+
Sbjct: 571 AYNLGRAYEEGGDHAKAAQWYRDVLRQHPEHVESKVRLALIATSAGRHFDAHTLLKECLQ 630

Query: 588 -------VNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYF 640
                  +   Y N L  +G          +    F   +   D  D++   +LG W +F
Sbjct: 631 SDENNLILRSVYTNFLITIGS--------YREAFAFTTQTLKVDKSDAWTFCALG-WLHF 681

Query: 641 AALRNEKRAPKLEATHLE---KAKELYTRVIVQHTSNLYAANGAGVVL------------ 685
             L  E ++P+  A   +   ++ E Y R ++       AA G  + L            
Sbjct: 682 -TLGREAKSPQELAERPKQYLRSAEAYERALIIDPKCAMAAQGLAIALVEDSLALRGTNY 740

Query: 686 -AEKGQFDV-----SKDLFTQVQEA-ASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQ 738
            AE+G+        +  +F +++++ A G+V V       NL H YF +G    A++ Y 
Sbjct: 741 GAEEGKVRARLAGQTLGIFGRIKDSLAEGAVNV-------NLGHCYFIRGEEEKAIESYM 793

Query: 739 NCLRKFYYNTDAQILLYLARTHY----EAEQWQDCKKSL---LRAIHLAPSNYTLRFDAG 791
                F    D  +LLYLAR  Y        +    K+L    +A+H+ P++  + ++  
Sbjct: 794 TASNAF-DEKDVNVLLYLARAWYALANRESNFSAMNKALDYCQKAMHIHPADRAILYNIA 852

Query: 792 VAMQKFSAS--TLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGFDEKKINTHV 849
           +  QK +    +L  ++RT +E+   + + + AV  F  L+   +  L  +D +  +   
Sbjct: 853 MIQQKAAEMLFSLDCSKRTLEELTIALKQAQQAVDTFRSLADDRSGSLP-YDAELADQRA 911

Query: 850 EYCKHLLDAAKIHREAAEREEQQNRQRQEAARQAALAEEARR-KAEEQKKYLL--EKRKL 906
            Y + LL      R A E  +Q+  Q +  AR     EEARR +AEEQ +     E R+ 
Sbjct: 912 RYGEGLL-----RRAAGEMTKQEAYQGEALAR----VEEARRLRAEEQARIQAAEEARQA 962

Query: 907 EDEQKRLRQQEEHFQRVKAR 926
           E    R++ +E   QR KAR
Sbjct: 963 E---LRIKAEEIAEQRRKAR 979


>gi|325091791|gb|EGC45101.1| tetratricopeptide repeat protein [Ajellomyces capsulatus H88]
          Length = 1209

 Score =  124 bits (310), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 110/431 (25%), Positives = 196/431 (45%), Gaps = 49/431 (11%)

Query: 2   ACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQ 61
           + + IP    + EV ++L++LP D +++  +L  E+A  + W+IIA  Y KQ +++    
Sbjct: 29  SAIDIPASTFDSEVEISLEELPDDPTELCTLLDNEKAAKNFWVIIALAYAKQNQIDHAID 88

Query: 62  ILEEGSSPEIDEYYADVRYERIAILNALGVYYTYL----------GKIETKQREKEEHFI 111
           IL  G    +      V  E++ +L  +   Y             G++ ++ + K+ +  
Sbjct: 89  ILNRG----LSSLAQGVTKEKLGLLGWICWLYMRKSREAPRVAPEGQLVSEAKTKDYYLQ 144

Query: 112 LATQYYNKASRIDMHEPSTWVGKGQLLLAKGE------------------VEQASSAFKI 153
            AT   N+ASR++   PS ++ +G L + +                    VE    A K 
Sbjct: 145 AATSTLNEASRLNPAYPSLFLARGVLSILRASLQPPAKALRPGTVDTSERVETLRQALKC 204

Query: 154 VLEADRD----NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGA-IRLGIGLCRY 208
             E+ +     NV A+LG+A  ++  GRY+++LE Y+  L   P+      R+GIG C +
Sbjct: 205 FDESAKSFGNRNVMAILGRARAQYMLGRYAEALEGYQEVLIKMPNMRDPDPRIGIGCCLW 264

Query: 209 KLGQLGKARQAFQRALQLDPENVEALVALAVMDL------QANEAAG---IRKGMEK-MQ 258
           +L    +A+ A+ RAL L+PE+  A + L    L        N+ A     +  M +  Q
Sbjct: 265 QLDFKEQAKAAWTRALALNPESKVANILLGAYYLYDSSRHATNDPAFGSLYKIAMTQYTQ 324

Query: 259 RAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSK 318
           +AF++     M  +    +F        VE L   A+ +T+     S  +Y LAR  H +
Sbjct: 325 KAFKVDKEYPMTCSMFGGYFLLRKHFPTVEALARKAIELTDVNAIASDGWYLLARKEHFE 384

Query: 319 GDYEKAGLYYMASVKEINKPHEFIFPY-YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCE 377
           G+  +A  YY  S +          P  +G  Q+Q++ GD+  A    EK+++    N E
Sbjct: 385 GNSARANEYYSRSDQARGGGDSGYLPAKFGAVQMQVRTGDYDGAKFRLEKIIQ-QTKNPE 443

Query: 378 TLKALGHIYVQ 388
           ++  LG ++ +
Sbjct: 444 SMTLLGALFAE 454



 Score = 48.1 bits (113), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 75/315 (23%), Positives = 132/315 (41%), Gaps = 43/315 (13%)

Query: 624 DGKDSYATLSLGNWNYFAALRNEKRAPKLEATH----LEKAKELYTRVIVQHTSNLYAAN 679
           D  D Y+   +GN  Y  A R+ KR  + +        EKA E + + +     N YAA 
Sbjct: 672 DKHDRYSLTGMGNI-YLLAARDMKRDTEQDREKRRKMYEKAVEFFDKALQLDPKNAYAAQ 730

Query: 680 GAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPD------VWINLAHVYFAQGNFALA 733
           G  + L      D  KD  T VQ      +F ++ D      V++NL HVY     F+ +
Sbjct: 731 GIAIAL-----VDDRKDYTTAVQ------IFSRIRDTLRDASVYLNLGHVYAELRQFSKS 779

Query: 734 MKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQ----------DCKKSLLRAIHLAPSN 783
           ++ Y+  L K     D QIL  L R        +          DC +   RA  +AP  
Sbjct: 780 IENYEAALSKDR-QRDTQILACLGRVWLLKGMQEMNLAAMNTALDCTQ---RARAIAPEQ 835

Query: 784 YTLRFDAGVAMQKFS--ASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASNL-HLHGF 840
             L F+      + +    +L +T+++  +V+     L+ A+  FS ++ A +  +  G 
Sbjct: 836 IHLEFNVAFVQNQIAQLVVSLPETQKSLQDVQIASDGLDEAINTFSQIAKAKHPPYPRGS 895

Query: 841 DEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEAARQAALAEEARRKAEEQKKY- 899
            E++ N      +  L+  +  +   E EE+   + Q+A          R + + + +  
Sbjct: 896 LEQRANMGKNTIRRKLE--RTLQSQGEYEEKNATKLQQAREARETELRRREEEKRKVEEA 953

Query: 900 -LLEKRKLEDEQKRL 913
            L  KR++ ++++RL
Sbjct: 954 ELERKRQIAEDRQRL 968


>gi|405118272|gb|AFR93046.1| pol II transcription elongation factor [Cryptococcus neoformans
           var. grubii H99]
          Length = 1177

 Score =  123 bits (308), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 248/1050 (23%), Positives = 432/1050 (41%), Gaps = 221/1050 (21%)

Query: 17  VALDQLPRD-ASDILDILKAE-QAPLDLWLIIAREYFKQGKVEQFRQILEEGSSPEIDEY 74
           V LD L +D  +DI+ ++ A+ ++    W +IA E++++G+  +   +LE   S     +
Sbjct: 20  VDLDSLAQDEVADIIPVMLADYESECRDWTLIASEHWREGRWNRVMDLLERAVS-----F 74

Query: 75  YADVRYER------IAILNALGVYYTYLG--------------KIETKQREKEEHFILAT 114
           +   R  R      I+I + L   + +L               K++   R K+ H   A 
Sbjct: 75  FNGERGRRRDFSSLISIHSMLAHLHLHLARNAPKVILQNTKYDKLDPSARTKDYHHREAA 134

Query: 115 QYYNKASRI-------DMHEP-STWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALL 166
              N A+            EP S  +GKG   LA   VE+       +L    +N+ AL 
Sbjct: 135 ASLNAATEALRASGGSQEDEPVSLTMGKG---LAHPLVER-------LLLRQPNNLIALT 184

Query: 167 GQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQL 226
            QA ++F R  +  +L+ Y++ L + P      R+G+GLC ++LG   KAR A++RALQ 
Sbjct: 185 AQARLQFARRSHLQALQTYQKLLALAPEMSPDPRIGLGLCFWQLGDRAKARTAWERALQR 244

Query: 227 DPEN-VEALVALAVMDLQANEAAGIR--------KGMEKMQRAFEIYPYCAMALNYLANH 277
           +P + V  L+        A + +  R        +G+  +Q+AF++    + +   LA+ 
Sbjct: 245 EPGSWVCLLLLGLASLNDARQPSVPRTERLKLETEGVGFVQKAFKLNNKSSASALALASV 304

Query: 278 FFFTGQH--FLVEQLTETALAVTNHGPTKSHSYYNLARSYHSK-----GDYEKAGLYYMA 330
               GQ    L  +L E A+    +   K H+   LA S   +     GD   AG Y +A
Sbjct: 305 SGQGGQSQLPLASKLAERAV---QYADNKRHAV--LANSERGRLGFMAGDLADAGTY-IA 358

Query: 331 SVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKV------------------LEIY 372
           +VK+ +     +     LGQ+ +K G+ R AL   E+                   L  Y
Sbjct: 359 AVKKEDPNAVNMIAELTLGQMAIKSGNLREALNYIEQTAKRLNGQGPLEYTVLHACLLAY 418

Query: 373 P------DNCETLKALG-------HIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGEL 419
           P      D     + L        H  V   + E     LR        DA  F+DL +L
Sbjct: 419 PHPGMSHDEVVRNRTLARNMLTEVHNLVSSAETEADWAKLRGVGS----DADVFVDLAKL 474

Query: 420 LISSDTGAALDAFKTARTLL--------KKAGEEVP----IEVLNNIGVIHFEKGEFESA 467
               +   A+ A++TA +++        ++ G + P    + + +N+G ++  +G  E+A
Sbjct: 475 WQGQNVEKAIGAYQTALSIITDNDLDSAQEPGLDPPNFTALRLSDNLGALYHLEGNVETA 534

Query: 468 HQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTV 527
            + +++AL                      ++ + K+ ++                K  +
Sbjct: 535 ERMYQEAL-------------------QKIAIQEGKEAEVL---------------KTVL 560

Query: 528 LFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAK-------ARNNLQLSIE 580
            +NL R  E+  D   A+  YR +L ++ ++V++ +RLA IA        A   L+  ++
Sbjct: 561 AYNLGRAYEEGGDHARAAQWYRDVLRQHPEHVESKVRLALIATSAGRHFDAHTLLKECLQ 620

Query: 581 LVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYF 640
                L +   Y N L  +G          +    F   +   D  D++   +LG W +F
Sbjct: 621 SEENDLTLRSVYTNFLITIGS--------YREAFAFTTQTLKVDKADAWTFCALG-WLHF 671

Query: 641 AALRNEKRAPKLEATHLE---KAKELYTRVIVQHTSNLYAANGAGVVL------------ 685
             L  E ++P+  A   +   ++ E Y R ++       AA G  + L            
Sbjct: 672 -TLGREAKSPQELAERPKQYLRSAEAYERALIIDPKCAMAAQGLAIALVEDSLALRGTNY 730

Query: 686 -AEKGQFDV-----SKDLFTQVQEA-ASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQ 738
            AE+G+        +  +F +++++ A G+V V       NL H YF +G    A++ Y 
Sbjct: 731 GAEEGKVRARLAGQTLGIFGRIKDSLAEGAVNV-------NLGHCYFIRGEEEKAIESYM 783

Query: 739 NCLRKFYYNTDAQILLYLARTHY----EAEQWQDCKKSL---LRAIHLAPSNYTLRFDAG 791
                F    D  +LLYLAR  Y        +    K+L    +A+H+ P++  + ++  
Sbjct: 784 TASNAFGAK-DVNVLLYLARAWYALANRESNFSAMNKALEYCQKAMHIHPADRAILYNIA 842

Query: 792 VAMQKFSAS--TLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGFDEKKINTHV 849
           +  QK +    +L  +RRT +E+   + + + AV  F  L+   +  L  +D +  +   
Sbjct: 843 MIQQKAAEMLFSLDSSRRTLEELTIALKQAQQAVDTFRSLADDKSGPLP-YDAELADQRA 901

Query: 850 EYCKHLLDAA--------KIHREAAEREEQQNRQRQEAARQAALAEEARR-----KAE-- 894
            Y + LL  A            EA  R E+  R R E   +   AEEAR+     KAE  
Sbjct: 902 RYGEGLLRRAAGEMSKQEAYQGEALARVEEARRLRAEEQARIQAAEEARQAELRIKAEEI 961

Query: 895 -EQKKYLLEKRKLEDEQKRLRQQEEHFQRV 923
            EQ++  LE+     E+   RQ EE  +R 
Sbjct: 962 AEQRRKALEEALAWQEELAARQAEEEARRA 991


>gi|401838480|gb|EJT42095.1| CTR9-like protein [Saccharomyces kudriavzevii IFO 1802]
          Length = 746

 Score =  122 bits (307), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 190/798 (23%), Positives = 330/798 (41%), Gaps = 153/798 (19%)

Query: 6   IPVQNSEEEVRVALD-QLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQILE 64
           IP++ SEE V + L+  LP D +D+  +L  E +  + WL IA  Y   GK  +  +++E
Sbjct: 9   IPLKASEELVGIDLETDLPDDPTDLKTLLVEESSEKEHWLTIALAYCNHGKTNEGIKLIE 68

Query: 65  EGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQRE-KEEHFILATQYYNKASRI 123
              +   +        ER ++   L   +  L K  +   E KE+    A      A   
Sbjct: 69  MALNVFQNS-------ERASLHTFLTWAHLNLAKGHSLSMETKEQELTQAELNLKDAIGF 121

Query: 124 DMHEPSTWVGKG----QLLLAKGEVEQA---SSAFKIVLEAD--------RDNVPALLGQ 168
           D     TW+G      +L   +G  ++A   S  F   + A+        + N   LL +
Sbjct: 122 D----PTWIGNMLATVELYYQRGHYDKALETSDLFVKSIHAEDHRSGRQSKPNCLFLLLR 177

Query: 169 ACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDP 228
           A + + +  Y  SL+ ++  L ++P      R+GIGLC ++L     A +++QRALQ++ 
Sbjct: 178 AKLLYQKKNYMASLKIFQELLVINPVLQPDPRIGIGLCFWQLKDPKMAIKSWQRALQINS 237

Query: 229 ENVEALVALAVMDLQAN-----------EAAGIRKGMEKMQRAFEIYPYCAMALNYLANH 277
           +N  A + + + +   +           EA G  K +  +   F       + L  L  +
Sbjct: 238 KNTSASILVLLGEFHDSLIDSSNDDTFKEAFG--KALIDLNTVFSENQNHPVLLTLLQTY 295

Query: 278 FFFTGQHFLVEQLTETALAVTNHGPTK----------SHSYYNLARSYHSKGDYEKAGLY 327
           ++F G +       +T L + +H   K          S S +   R++++ GDY K+ + 
Sbjct: 296 YYFKGDY-------QTVLNIYHHKIIKMSPLIAKTVLSESSFWCGRAHYALGDYRKSFIM 348

Query: 328 YMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYV 387
           +  S+K   K  + +    GLGQ Q+K      ++  FE    +Y  N E+L+ L +I  
Sbjct: 349 FQESLK---KNEDNLLAKLGLGQTQIKNNLLEESIITFEN---LYKTN-ESLQELNYILG 401

Query: 388 QL-------GQI-------------EKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGA 427
            L       G++             EKA + L +  K+        I     L+ S    
Sbjct: 402 MLYAGKALDGKMIKNLPAKELSNLNEKALKYLERYLKLALAMKNQLIISRAYLVISQLYE 461

Query: 428 ALDAFKTARTLLKKAGE--------EVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGI 479
           + + +KT+   L KA E        E+P+++LNN+   HF  G+   A   FK A     
Sbjct: 462 SQNQYKTSLDYLSKALEEMEFINQNEIPLDILNNLACYHFINGDLTKADDFFKQA----- 516

Query: 480 WLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIH 539
                  K K    D S +                          VT+ +N+AR  E+ +
Sbjct: 517 -------KAKVSGTDESVN--------------------------VTLEYNIARTNEK-N 542

Query: 540 DTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQ---LSIELVNEALKVNGKYPNAL 596
           D   +  +Y  I   +  Y+ A +R   +  A++ ++   +S+++ ++ L+VN       
Sbjct: 543 DPEKSECIYSQITSSHPAYIAARIRNLYLKFAQSKIEDSAMSVQM-DDLLEVNKSDLEIR 601

Query: 597 SMLGDLELKNDDWVKAKETFRAASDAT----DGKDSYATLSLGNWNYFAA-----LRNEK 647
           S  G   LKN    K  E     +  T       D+YA +SL N     A      RN K
Sbjct: 602 SFYG-WYLKNSKERKNNEKSTTHNKETLVKYSSHDAYALISLANLYVTIARDGKKSRNPK 660

Query: 648 RAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASG 707
              K + ++L KA +LY +V+     N++AA G  ++ AE  +   + ++  +V+++   
Sbjct: 661 EQEKSKHSYL-KAIQLYQKVLQVDPYNIFAAQGVAIIFAESKRLGPALEILRKVRDSLDN 719

Query: 708 SVFVQMPDVWINLAHVYF 725
                  DV +NLAH Y 
Sbjct: 720 E------DVQLNLAHCYL 731


>gi|402222020|gb|EJU02087.1| hypothetical protein DACRYDRAFT_99861 [Dacryopinax sp. DJM-731 SS1]
          Length = 1088

 Score =  122 bits (306), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 216/967 (22%), Positives = 398/967 (41%), Gaps = 176/967 (18%)

Query: 42  LWLIIAREYFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGK--- 98
           +W  +A EY+++G + +    +    S  + E      +E    +  L   +  L K   
Sbjct: 46  MWRTVAIEYWEKGNMARVEDTIRRAIS--VYERQGRDGHENWQAMQPLLANF-LLAKARD 102

Query: 99  -----IETKQREKEEHFIL-ATQYYNKAS----RIDMHEPSTWV----GKGQLLLAKGEV 144
                + T Q +K +  +   + Y N+A+    R+D   P   V     K    LA+  +
Sbjct: 103 APKLILRTAQEDKLDSKVQEKSVYINEAATSMVRMDSAVPKLSVVQLLSKAVSPLAENAI 162

Query: 145 EQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIG 204
           + A   F  +L+  ++N  AL+G       +GR      +++ AL+  P      R+GIG
Sbjct: 163 DAAGRTFDEILQQQQNNPVALMG-------KGRI-----YFQEALKYAPDLLPDPRVGIG 210

Query: 205 LCRYKLGQLGKARQAFQRALQLDPE--NVEALVALAVMDLQANEAAGIRKGMEKMQRAF- 261
           LC + LG   +AR+A+QR+L++ P+    + L+ L+++    N+A   R+   +  RA+ 
Sbjct: 211 LCAWSLGDQDRARRAWQRSLEVHPDLPAPQILICLSLL----NDAKDKRRDQRERSRAYS 266

Query: 262 -----------EIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYN 310
                      +   +CA+  + L+ +F    +     +  E  +   +     S  Y  
Sbjct: 267 QGIKGLAALFRDKGKHCAIVADALSAYFMERKEWDKAVKAAERTIQFADLRSVVSDGYMR 326

Query: 311 LARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLE 370
           L R  H +GD  +A   Y  SV    K         GLGQV +   +  +A+ ++E +L 
Sbjct: 327 LGRIAHLRGDLPQAVEQYGISVDRNEKNQ---LARTGLGQVHILTNEIPAAIHDYELLLS 383

Query: 371 IYPDNCETLKAL--------------GHIYVQLGQIEKAQELLRKAAKI---------DP 407
              DN   ++AL                +    G++ +A++L  +AA+I           
Sbjct: 384 ---DNQNLIEALLPLTSLQASAWPGASPVEQDAGKV-RARQLYDRAARIIKGKEVETEGM 439

Query: 408 RDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEE---VPIEVLNNIGVI-HFEKGE 463
            D + ++++ +L  + D+  A DA+  A  L ++  +    V  ++LN + VI H   G 
Sbjct: 440 EDPELWVEVAKLWQAEDSNKARDAYARAVELARETADPEKGVDPKLLNALAVIRHIHGG- 498

Query: 464 FESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWN 523
            E+     +D     ++   L   TK                        +G   E+   
Sbjct: 499 -ETGRTEARD-----LYQEALVGATKA----------------------EEGPENEM--V 528

Query: 524 KVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVN 583
           +   L+NL R  E + +   A   Y+ +L ++ +YVDA  RLA + + R  +  +  L+ 
Sbjct: 529 QTATLYNLVRCWEALGEQTQAQEAYQKLLSRHPEYVDAKARLAHVYQQRGRIDEAHGLLK 588

Query: 584 EALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDS-YATLSLGNW----- 637
           +AL+         S   +L+L      +A  T+   S     + S +A L+L N+     
Sbjct: 589 DALE---------SQTDNLDL------RAYYTYFLPSHKQSRQSSKFAELTLSNYDKHDV 633

Query: 638 --------NYFAALRNEK----RAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVL 685
                   +  +A R  +     A K+   H +   + Y +V+    +  YAA G  +++
Sbjct: 634 YALSAVAADLCSAARENRDTGSEAIKVRRKHFQNCAQAYDKVLSLDPNCAYAAMGLAIMI 693

Query: 686 AEKGQFDVSKDLFTQVQE--------AASGSVF------VQMPDVWINLAHVYFAQGNFA 731
           AE     ++      V E        A +  VF      +    V +N+ H Y+    F 
Sbjct: 694 AEDALGGLAGAPVPGVDEARERERNAAEALGVFGRVRESINNGSVLVNMGHCYYTLEQFQ 753

Query: 732 LAMKMYQNCLRKFYYNTDAQILLYLARTHY---EAEQWQDCKKSLL----RAIHLAPSNY 784
            A++ Y+   R +Y   D  +LL+L    Y     EQ ++  ++ L    +A+ LAP + 
Sbjct: 754 KAIESYELASR-YYNGKDFAVLLHLCCAWYAKANLEQNREGMETALDYAKKALALAPEDK 812

Query: 785 TLRFDAGVAMQKFSAS--TLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGFDE 842
              +D  V  QKF+    +L   R+T + ++  + + + A  +F+ L       +  F  
Sbjct: 813 ATVYDIAVIQQKFAELLFSLPPDRQTLENLQEAIDQAQEAQGMFAAL-VEDKSPVMPFAR 871

Query: 843 KKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEAARQAALAEEARRKAEEQKKYLLE 902
              +    Y + +L  +  H EA +  EQ+   + EAAR  A+ EE R++ +     L  
Sbjct: 872 DLPDQRRRYGETVLRKSGEHVEAQKAYEQEVVAKTEAAR--AMQEEERKR-KRPSPILTR 928

Query: 903 KRKLEDE 909
             +LEDE
Sbjct: 929 DERLEDE 935


>gi|254579651|ref|XP_002495811.1| ZYRO0C03564p [Zygosaccharomyces rouxii]
 gi|238938702|emb|CAR26878.1| ZYRO0C03564p [Zygosaccharomyces rouxii]
          Length = 1096

 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 240/1021 (23%), Positives = 420/1021 (41%), Gaps = 187/1021 (18%)

Query: 6   IPVQNSEEEVRVALD-QLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQILE 64
           IP++ SEE V + L+  LP D +D+  +L  E +  + WL IA  Y   G   Q  +++E
Sbjct: 20  IPLKASEEVVSINLETDLPDDPADLRTLLVEEGSDKEHWLTIAIAYCNSGNTPQGIRLVE 79

Query: 65  EGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNK-ASRI 123
                   E + +   E+  +   L   +  L K +    E  +H +   +   K A  +
Sbjct: 80  MAL-----ETFDNT--EKAPLYTFLTWAHLKLAKEKAASVESRDHELTQAEIQLKNAIGV 132

Query: 124 DMHEPSTWVGKG----QLLLAKGEVEQA---SSAF-KIVLEADR-------DNVPALLGQ 168
           D     TW+G       L   +G  ++A   S  F K +   DR        N   LL +
Sbjct: 133 D----PTWIGNMLATIDLYYQRGHYDRALETSDLFVKSIHSEDRRKGIQSKPNSMFLLLR 188

Query: 169 ACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDP 228
           A + + +  Y  SL  ++  L ++P      R+GIG+C ++L     A  A++RAL+L+P
Sbjct: 189 AKLLYQKKNYMASLRAFQELLVINPVMYPDPRIGIGMCFWQLKDYKLAIAAWKRALELNP 248

Query: 229 ENVEALVALAVMDLQANEAAG---------IRKGMEKMQRAFEIYPYCAMALNYLANHFF 279
            N  A V + + +   +  A            K ++ +           +    L ++F+
Sbjct: 249 VNNNAAVLVTLGNFHNSLTASENDESFRENYSKALQDLDGLLRKDGQNPVLWTLLQSYFY 308

Query: 280 FTGQHFLVEQLTETALAVTNHGPTK---SHSYYNLARSYHSKGDYEKAGLYYMASVKEIN 336
           F G    V ++ E  ++      +    S S +   R++++  DY KA   +   +K   
Sbjct: 309 FKGDFTKVIEVYENKISKFGFAISDTVLSESIFWCGRAHYALQDYRKAFSMFQQCLK--- 365

Query: 337 KPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQ----- 391
           +  + +   +G GQ Q+K      ++  FE + + +    E    LG +Y   G+     
Sbjct: 366 RNEDNLLAKFGFGQTQMKNKLMEESILTFENIYKNHEGIQELNYILGLLYA--GKCLDPA 423

Query: 392 -------------IEKAQELLRKAAKI-DPRDAQAFIDLGELLISSDTGAALDAFKTART 437
                        +EK+ + L K  +I + +  Q  I    L I S+   A +  K +  
Sbjct: 424 NSKNLPRKEFEKFVEKSIQYLEKYIRITNAKKNQVVIPRAYLAI-SELYEAQNQHKQSLE 482

Query: 438 LLKKA--------GEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTK 489
            L KA        G+  PIE+LNN+G  HF  G+ E A   F     D +       KT+
Sbjct: 483 YLSKALQQVQEVEGDTAPIEILNNLGCFHFINGDMEKAKYFF-----DSV-------KTR 530

Query: 490 TYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYR 549
           T                     E D N        VT+ +N AR+LE  +   + SV Y 
Sbjct: 531 T---------------------EKDFN--------VTIYYNFARVLEAENAEESKSV-YD 560

Query: 550 LILFKYQDYVDAYLR---LAAIAKARNNLQLSIE--LVNEA--LKVNGKYPNALSMLGDL 602
            I+ K+  Y+ A +R      I    +NL+  ++  L N A  L+V   Y   L      
Sbjct: 561 QIISKHPGYLSARMRRLFFRVIENDNSNLKEDMDRLLSNNASDLEVRSFYSWFLKNNHTD 620

Query: 603 ELKNDDWVKA--KETFRAASDATDGKDSYATLSLGNWNYFAALRNEKR--APKLEATHLE 658
             K+D+   A  KET        +  D YA  SL N  Y    R  KR  +PK +    +
Sbjct: 621 PKKSDNLETAHNKETLV----KYNSHDFYALTSLANL-YLMIGREAKRGHSPKDQDNSKQ 675

Query: 659 ---KAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPD 715
              KA +L+ +V+     +++AA G  +V AE  +F  + ++  + +++          D
Sbjct: 676 SFLKAVQLFQKVLQLDPFSIFAAQGIAIVFAESKRFGPALEILRKARDSLDNE------D 729

Query: 716 VWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTD-AQILLYLARTHY-------EAEQWQ 767
           V +N+AH       +A A+++Y+  L+KF    +  ++L  L R  Y         E +Q
Sbjct: 730 VHVNMAHCLLEMHEYAKAIELYEFSLKKFGNEENRPKLLNLLGRAWYARATRERSLEFFQ 789

Query: 768 ----DCKKSL----LRAIHLAPSNYTLRFDAGVAMQKFS-ASTLQKTR---RTADEVRST 815
               + +K+L     R+  +    +       VA+  F  A TL+++    RT   ++  
Sbjct: 790 FALNNSEKALEAETARSSSVKNDKFLASLKYNVALLHFQVAETLRRSNPKGRTLSTIQLA 849

Query: 816 VAELENAVRVFSHLSAASNLHLHGF---DEKKINTHVEYCKHLLDAAKIHREAAEREEQQ 872
            A L+  +++   L       L GF    ++++   ++  +  + +A + R   E+E  +
Sbjct: 850 QAGLDTGLQILKELKG-----LEGFVIIPKEELEQRIQLGETTMKSA-LERCVKEQEAYE 903

Query: 873 NRQRQEAARQAALAEE---------------ARRKAEEQKKYLLEKRKLEDEQKRLRQQE 917
           N Q ++  +   L EE               +R K E QK+   E R+L+DE +++ Q+ 
Sbjct: 904 NEQVEKFEQAKKLMEENEQREQEKKRQEEEASRIKLERQKE---EYRRLQDEAQKIIQER 960

Query: 918 E 918
           E
Sbjct: 961 E 961


>gi|358055991|dbj|GAA98336.1| hypothetical protein E5Q_05021 [Mixia osmundae IAM 14324]
          Length = 1296

 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 192/852 (22%), Positives = 347/852 (40%), Gaps = 176/852 (20%)

Query: 178  YSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVAL 237
            +  SL  Y++ L + P      R+G+GLC ++LG   +A +A++R++   P    A   L
Sbjct: 380  FKQSLRLYQQILTLAPDSLPDPRIGLGLCLWQLGHSQRAVRAWKRSIAKHPGEASATAKL 439

Query: 238  AV------------MDLQANEA-----AGIRKGMEKMQRAFEIYPYCAMALNYLANHFFF 280
             +             D  + EA        ++    +   F+    C+ A   LA  +  
Sbjct: 440  LLGLTHFNTSKQKQRDASSREAELESETTYQQSFTSIATCFKEDKICSPAAFLLAGFYQE 499

Query: 281  TGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYY-MASVKEINKPH 339
            +  +  + +L E A+  +      S SY  LAR++H++ +   A  +Y +AS    N+  
Sbjct: 500  SDSNRSI-KLAERAIQYSTSAAMLSESYLALARTHHAQANLRTALEFYELASQHATNQ-- 556

Query: 340  EFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQ--------LGQ 391
              +     + Q+++K  +  +AL + ++VL+I  +  E +  L  +Y           G 
Sbjct: 557  --VVSLLAMAQIRIKQNELPAALDSLQRVLKIDNNCIEAIANLAVLYTSEYFKLPASTGL 614

Query: 392  IEK------AQELLRK-----------------------------AAKIDPRDAQAFIDL 416
             EK      A+E+  K                               ++   DA  ++D+
Sbjct: 615  AEKQAVAKEAKEIYDKLLGLFAASSAAAQNALDVSASRTVLPSQRRVRLVSEDADVYVDV 674

Query: 417  GELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALG 476
             +L I  D    L A++ +  +       +P ++ NNIG + F + + + A + F+ AL 
Sbjct: 675  AKLWIEDDAAKCLKAYRESLRVRVDLALSLPPQLHNNIGCLLFLRNQTDLAQEHFETALT 734

Query: 477  DGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNH---VELPWNKVTVLFNLAR 533
            + I  T +  +T T   DA   ++ F    L   +E  GN    ++L  NK         
Sbjct: 735  NAI--TQVADETATLAQDA---LITFISYNLGLVYEASGNTDLAIDLYQNK--------- 780

Query: 534  LLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYP 593
                             +L ++ ++ +A  RLA IA  + ++Q   +L+ E  K +G   
Sbjct: 781  -----------------LLARHSEFNEAKARLAIIALQKGDVQQCTKLLKECHKTDG--- 820

Query: 594  NALSMLGDLELKNDDWVKAKET--FRAASD-------ATDGK-DSYATLSLGNWNYFAA- 642
                   DL +K        ET  F+AA D       + D + D YA  S G   +  A 
Sbjct: 821  ------SDLAIKALTTYVLVETKQFKAARDNASYTLQSADARNDVYALCSAGMLQFEHAR 874

Query: 643  -LR-NEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVS---KDL 697
             LR  +K++ +  A    KA E + +V+     N +AA G  + LAE G  +VS    D 
Sbjct: 875  DLRPKDKKSFQERAGRFTKAAESFEKVLQIDPKNAFAAQGLAICLAE-GTLNVSAPGPDG 933

Query: 698  FTQVQEAASG-------SVFVQMPD------VWINLAHVYFAQGNFALAMKMYQNCLRKF 744
                + A          ++ +++ +      V++NL H YFA+  F  A++ ++   ++F
Sbjct: 934  IVLSESARRARNLRDAIAILIRLRETVNEASVYVNLGHCYFAREEFEKAIEAFEAASKRF 993

Query: 745  YYNTDAQILLYLARTHYEA----EQWQDCKKSLL---RAIHLAPSNYTLRFDAGVAMQKF 797
                    LLYLAR  +        +    ++L+   +A  L P + +++F+  + +Q  
Sbjct: 994  SNERSVSTLLYLARACFHKGHRDRSFAAVSEALVAVQKAHALNPKDLSIQFNMAI-VQHR 1052

Query: 798  SASTLQKTR---RTADEVRSTVAELENAVRVFSHLS------------AASNLHLHGF-- 840
                L +T    RT  E+   + E + A  +F+ L             AA     +G   
Sbjct: 1053 GLEILAETPSEARTLSEIDGAIVEAQKAQEIFARLGRQKGEEVPFSVDAAQQRVRYGLGL 1112

Query: 841  ----DEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEAARQAALAEEARRKAE-- 894
                +E      VEY     + AK+ R   +R+ ++ R+    A +   AE AR +AE  
Sbjct: 1113 IKRAEEHDRTRQVEY--ESTEQAKLERAKRDRDAERKRKDDMVAER---AERARLQAEQL 1167

Query: 895  -EQKKYLLEKRK 905
             EQ++ +LE  K
Sbjct: 1168 AEQRRQMLEDAK 1179


>gi|81294210|gb|AAI07917.1| Ctr9 protein [Rattus norvegicus]
          Length = 493

 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 73/199 (36%), Positives = 117/199 (58%), Gaps = 11/199 (5%)

Query: 715 DVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLL 774
           DVW+NLAH+Y  Q  +  A++MY+NCLRKFY + + +++LYLAR  ++  + Q+CK++LL
Sbjct: 2   DVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVVLYLARALFKCGKLQECKQTLL 61

Query: 775 RAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASN 834
           +A H+APS+  L F+  + +Q+ + S L+  +    EV + V ELE A R FS+LS   +
Sbjct: 62  KARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVLNAVKELELAHRYFSYLSKVGD 121

Query: 835 LHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNR-------QRQEAARQAALAE 887
                FD     +    C  LL  A+ H   A +++++ R       Q +E  RQ  L E
Sbjct: 122 KMR--FDLALAASEARQCSDLLSQAQYHVARARKQDEEERELRAKQEQEKELLRQKLLKE 179

Query: 888 E--ARRKAEEQKKYLLEKR 904
           +   R + +E++K LLE+R
Sbjct: 180 QEEKRLREKEEQKKLLEQR 198


>gi|340508325|gb|EGR34050.1| hypothetical protein IMG5_025760 [Ichthyophthirius multifiliis]
          Length = 355

 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 91/318 (28%), Positives = 160/318 (50%), Gaps = 23/318 (7%)

Query: 165 LLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRAL 224
           L+ +A + F +  Y  SL+F+K ALQ +P  PG  RLG+G C Y L +   +++AFQR L
Sbjct: 23  LIKKAQLYFYQKNYEQSLKFFKEALQKNPRLPGRARLGLGYCFYMLKKYELSKRAFQRVL 82

Query: 225 QLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQH 284
           QLD +  E+ + LA++  +  +  G +   + + +AF+I P   + L Y+A  ++     
Sbjct: 83  QLDSQVFESHLGLAILAYKRKDYQGYQ---DHLNKAFQINPNNPLVLYYIAEFYYLQQDS 139

Query: 285 FLVEQLTETALAVTNHGP---TKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEF 341
             V+++   A+   N  P    +        R+Y       K+ LY+M     ++K  ++
Sbjct: 140 DSVQKIAIQAIQNLNMLPKIINEQEKTKVGKRAYRFDFFDLKSRLYFMIG-NTLHKEQQY 198

Query: 342 IFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQ--LGQIEKAQ--E 397
                   Q   +L + RS     +K L +     ET K L ++  +  LGQ + +Q  E
Sbjct: 199 -------DQAFKRLEEIRSQCFENDKELIL-----ETYKHLAYLQSKCALGQTKLSQQYE 246

Query: 398 LLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVI 457
             +KA + +P+D ++ ++    L  +D   +L  F+ A  +LK+ GE++  E+ NNIGV+
Sbjct: 247 YYKKALQYNPKDTESMLECANHLTDTDQRESLKYFENALEILKEKGEKILPELYNNIGVL 306

Query: 458 HFEKGEFESAHQSFKDAL 475
                +FE A ++F  AL
Sbjct: 307 RLSLNQFEGAKEAFGKAL 324


>gi|156051218|ref|XP_001591570.1| hypothetical protein SS1G_07016 [Sclerotinia sclerotiorum 1980]
 gi|154704794|gb|EDO04533.1| hypothetical protein SS1G_07016 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 1016

 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 137/565 (24%), Positives = 243/565 (43%), Gaps = 100/565 (17%)

Query: 2   ACVYIPV--QNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQF 59
           + + IPV  ++ ++ V + L+ L  D +++  +L+ E A    W+ +A  Y KQ KV+  
Sbjct: 35  SAIDIPVTGEDDDQAVEIDLEDLLDDPTELCTLLENEGAARTYWMTVALAYAKQKKVDHA 94

Query: 60  RQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQRE-----------KEE 108
            ++L +G S            ER+++L  L   Y +  K   + R            KE+
Sbjct: 95  IEMLTKGQS-----AMRGGNKERLSMLTCLCWMYLWKSKEAPRHRPDNLEDGDEIKTKED 149

Query: 109 HFILATQYYNKASRIDMHEPSTWVGKGQLLL-------------AKGEVEQ--------A 147
              +AT   N ASRI+   P  ++ +G L L             A G ++         A
Sbjct: 150 WLKMATSNLNDASRINPSFPPLFLARGVLQLLRASTRPFPKNNTAPGALDPEKAELLRGA 209

Query: 148 SSAFKIVLEADRD-NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS-CPGAIRLGIGL 205
             +F+  ++A    N+ A+LG+A   F+ G+Y+++LE Y+ AL+  P       R+GIG 
Sbjct: 210 QKSFEDAIKASHGRNMLAVLGKARAAFSMGKYAEALEGYQEALRSMPDLVDPDPRIGIGC 269

Query: 206 CRYKLGQLGKARQAFQRALQLDPENVEALVALA--VMDLQANEAAG-------IRKGM-E 255
           C ++LG    A+ A++R+L+++P++  A + LA   +D  A+            +K M E
Sbjct: 270 CFWQLGFKEDAKAAWERSLEINPDSKVANILLAQFYLDQSAHVPTNSPEFIQLYKKAMTE 329

Query: 256 KMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSY 315
             QR++++     +     A +F        VE L + A+  T+     S  +Y LAR  
Sbjct: 330 YTQRSYKVDKDMPLTCATFAGYFLSRKSMPNVEALAQKAIQYTDVNAIASDGWYLLARKE 389

Query: 316 HSKGDYEKAGLYY-MASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPD 374
           H   +YEKA  YY  A          ++   +G  Q+ +  GDF  A    EK+++    
Sbjct: 390 HFDDNYEKALDYYGRADDARGGIDRGYMPAKFGAAQLSVLKGDFGEAKLRLEKIIQ-QSK 448

Query: 375 NCETLKALGHIYV-------QLGQIEKAQELLRKA---------AKIDPR-----DAQAF 413
           N E +  LG +Y        + G  E      +KA         A  DP+     DA   
Sbjct: 449 NIEAMILLGTLYAEEVFSSQESGVKEDKTTEFKKAIGYLENVRTAWKDPKKNLVPDASVL 508

Query: 414 IDLGEL-----------------------LISSDTGAALDAFKTARTLLKKAGEEVPIEV 450
           ++L  L                       + ++D     D     ++ ++   E +  ++
Sbjct: 509 LNLARLYETEQPEKSLQCLQQVEQIEFDQIPAADRPEETDDEAAYKSAMR---ENLSPQL 565

Query: 451 LNNIGVIHFEKGEFESAHQSFKDAL 475
           LNNIG  +++  +++ A + F+ AL
Sbjct: 566 LNNIGCFYYQSEKYDQAREMFQSAL 590


>gi|301792893|ref|XP_002931413.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog, partial
           [Ailuropoda melanoleuca]
          Length = 168

 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 66/168 (39%), Positives = 100/168 (59%), Gaps = 6/168 (3%)

Query: 304 KSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALT 363
           ++ S Y LARS+H + DY++A  YY  + +  +    F+ P++GLGQ+ +  GD  +A  
Sbjct: 2   QAESCYQLARSFHVQEDYDQAFQYYYQATQFASS--SFVLPFFGLGQMYIYRGDKENASQ 59

Query: 364 NFEKVLEIYPDNCETLKALGHIYVQLGQIEK---AQELLRKAAKIDPRDAQAFIDLGELL 420
            FEKVL+ YP+N ET+K LG +Y      EK   A+  L+K  +  P D +A+I+L ++L
Sbjct: 60  CFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKVTEQYPDDVEAWIELAQIL 119

Query: 421 ISSDTGAALDAFKTA-RTLLKKAGEEVPIEVLNNIGVIHFEKGEFESA 467
             +D   AL A+ TA R L +K   +VP E+LNN+G +HF  G    A
Sbjct: 120 EQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEA 167


>gi|443916822|gb|ELU37769.1| RNA polymerase II-associated protein [Rhizoctonia solani AG-1 IA]
          Length = 1077

 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 183/836 (21%), Positives = 344/836 (41%), Gaps = 149/836 (17%)

Query: 10  NSEEEVRVALDQLPRDASDILD-----ILKAEQAPLDLW--LIIAREYFKQGKVEQFRQI 62
           NS E +++ LD++    S+ +D     +L  E  P   W    IA E+ ++G  ++  +I
Sbjct: 11  NSNETIQLNLDEITNPPSNGMDGEAVMMLLQEAKPQAWWKWTAIATEFARKGLKQEAEEI 70

Query: 63  LEEGSS-------PEIDEYYADVRYE------RIAILNALGVYYTYLGKIETKQR--EKE 107
            +E  S         +    A +R +      ++ + +AL      L    TK    ++ 
Sbjct: 71  AKEAVSVLQPTQAASVHSLLALLRLDSARHAPKMLLSDALMTGADQLPPQPTKSAFVDQA 130

Query: 108 EHFILATQYYNKASRIDMHEPST-----WVGKGQLLLAKGEVEQASSAFKIVLEADRDNV 162
             F+ A Q    A   D   P +     ++ KG   +A+     A   F IVL     NV
Sbjct: 131 TEFVNAGQ---AAIVTDSEVPESVNTLFYLTKGIYQMARFSWVGAEKDFDIVLAKHSSNV 187

Query: 163 PALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQR 222
            AL+G+A + + R +Y ++L+ ++  L ++P      R+GIGLC ++L    +A  A++R
Sbjct: 188 IALMGKARILYARKQYREALKGFQECLTLNPKMLPDPRIGIGLCYWQLEHRERALAAWKR 247

Query: 223 ALQLDPEN--VEALVALAVMDLQANEAA-------GIRKGMEKMQRAF-EIYPYCAMALN 272
           A Q+ P++     L+ + +M++  +             +G+ ++ +A+ E     A A  
Sbjct: 248 AEQVHPDSWYPGLLIGIYMMNISKDPKVPGQQRQDAFLEGVNRLTQAWRESNLNNASAAT 307

Query: 273 YLANHFFFTGQHFLVEQLTETALAVTNHGPTKS---HSYYNLARSYHSKGDYEKAGLYYM 329
            +++ F   GQ   + +  + A     H  T S   +     AR  H++G+Y+ A ++Y 
Sbjct: 308 AMSDVFLLKGQ---LNKALKAAERTIQHADTLSVAVNGRLRAARVAHTEGNYDAALVHYR 364

Query: 330 ASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDN-----CETLKALGH 384
            + +E + P   +    GL Q+ + + +  +A+ + +K+++            +L+A   
Sbjct: 365 TAAEEPSHP---LLADIGLAQMHVHIDELSAAIHDLDKLVQRNAGIEASAFLASLRAFPR 421

Query: 385 IYVQLG----QIEKAQELLRKAAK-ID----------PRDAQAFIDLGELLISSDTGAAL 429
             +       +  KA+E+  K  + ID            D   +I++  L    +   A 
Sbjct: 422 PALSAADAATEQAKAKEIFDKVVRMIDNGAGSGTGGVASDRDMYIEIARLWQKDNADKAT 481

Query: 430 DAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDA--LGDGIWLTLLDSK 487
            A   A   +K AG      ++NN+ V+   +G+  +A   +++A  +G G         
Sbjct: 482 KALIQA---VKLAGTP-DARLINNVAVMRHMEGDLVAAKSGYEEAAMVGGG--------- 528

Query: 488 TKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVL 547
                                     D + V       TVL+NL RL E + DT  A  +
Sbjct: 529 --------------------------DSDDV-----VTTVLYNLGRLHEDLGDTTMAGEV 557

Query: 548 YRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKND 607
           +  +L ++ +YVDA LR A +  +      +  LV +    + K  N  + +    L +D
Sbjct: 558 FDKLLARHPEYVDATLRKAQLYMSAGRTSEAAALVKQVSHTHSKDLNVRAFVSYFALSSD 617

Query: 608 DW-VKAKETFRAASDATDGKDSYATLSLGNW-NYFAALRNEKRAPKLEATHLEKAKELYT 665
              V+    F   +   +  D +A L +  W NY  A        + +    + A +LY 
Sbjct: 618 PVPVQDARAFVYTTLNIERADVHA-LCVAAWINYHMAREGRNMPEQDKKKRYKNAIDLYK 676

Query: 666 RVIVQHTSNLYAANGAGVVLAE--------KGQ-----------FDVSKDLFTQVQEA-A 705
           + ++   +   AA G  +++AE         GQ              +  +FT+V+E+  
Sbjct: 677 QALLNDPTCAVAAQGLAIMIAEDVTGLAIIPGQPQEEARQREVNLRDALGVFTRVRESLV 736

Query: 706 SGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHY 761
            GSV+        N+ H YF +  +      Y+   R+FY  T+   L++L RT Y
Sbjct: 737 DGSVYC-------NMGHCYFLREEY----DRYETASRRFYNGTNVSTLIHLTRTLY 781


>gi|366992047|ref|XP_003675789.1| hypothetical protein NCAS_0C04350 [Naumovozyma castellii CBS 4309]
 gi|342301654|emb|CCC69425.1| hypothetical protein NCAS_0C04350 [Naumovozyma castellii CBS 4309]
          Length = 1087

 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 230/989 (23%), Positives = 376/989 (38%), Gaps = 214/989 (21%)

Query: 6   IPVQNSEEEVRV-ALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQILE 64
           IP++ SEE V +  L  LP D +D+  +L  E +  + WL IA  Y  Q    +  Q+++
Sbjct: 30  IPLKASEELVSIDLLTDLPSDPADLRTLLVEESSSREHWLTIAAAYANQNLTLEAIQLIK 89

Query: 65  EGSSPEIDEYYADVRYERIAILNALGVY-YTYLGKIETKQREKEEHFILATQYYNKASRI 123
                 ++ +  D   E +A  +    + Y  L K     ++ + +   A  +  +A +I
Sbjct: 90  MA----LEVFLQDS--EGLAHCHTFLTWCYLKLSKTTKVPQDHDTYLNDAENHLKEAVKI 143

Query: 124 DMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEA------------DRDNVPALLGQACV 171
           +     TW+G    +LA  ++     A+   LE              + NV  LL +A +
Sbjct: 144 N----PTWIGN---MLATVDLYYQRGAYDKALETCDLFVKGVQQDTKKHNVMFLLLRAKL 196

Query: 172 EFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENV 231
            F +  Y  SL+ ++  L  +P      R+GIG C + L     A ++++RA QLD    
Sbjct: 197 LFRKKNYVASLKLFQELLVSNPVLKPDPRIGIGACFWHLKDYKMAIKSWERATQLD---- 252

Query: 232 EALVALAVMDLQANEAAGIRKGMEKMQRAF----------EIYPYCAMALNYL---ANH- 277
                       AN +A I   + K   +           E Y    M LN L    NH 
Sbjct: 253 ------------ANSSASILCLLGKFHNSLTESENDTQFKENYTASLMDLNTLYNDTNHP 300

Query: 278 --------FFFTGQHFLVEQLTETALAVTNHG--PTK--------SHSYYNLARSYHSKG 319
                         +F  +   E  L + +    P          S S     R+Y++  
Sbjct: 301 ENKENPVLLTLLQSYFYYKNDFENVLKIYDEKIKPISTLVADSILSESTLWCGRAYYALD 360

Query: 320 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 379
           DY KA   +  S+K      E +    GLGQ QLK      ++  FE + + +    E  
Sbjct: 361 DYRKAFAMFQESLK---TNEENLLAKLGLGQAQLKTNLLEESILTFENLYKSHAGIQELN 417

Query: 380 KALGHIYV-----QLGQIE-------------------KAQELLRKAAKIDPRDAQAFID 415
             LG +Y        GQ                     KA + L K  K+        + 
Sbjct: 418 YILGMLYAGKCFAAAGQNHESTSTTTTMSGKEISILNAKALQFLEKYIKLTTAKKNQLVI 477

Query: 416 LGELLISSDTGAALDAFKTARTLLKKAGEE--------VPIEVLNNIGVIHFEKGEFESA 467
               L  S      + +K +   L KA EE        VP+E+LNNIG  +F  G+ + A
Sbjct: 478 PRAYLTISQLYEKTNQYKQSLDYLTKALEEIQFINKDNVPLELLNNIGSFYFINGDADKA 537

Query: 468 HQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTV 527
            + F                      D + S           +  ND + +       T+
Sbjct: 538 KEYF----------------------DLAKS-----------KLSNDSSSL------TTI 558

Query: 528 LFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALK 587
            +N+AR LE   D   + VLY+ IL ++ +Y+ A +R         N  +  E+ N A K
Sbjct: 559 NYNIARTLE-TKDLEKSQVLYQDILNEHPNYIAAKIRTLFFKFVNGNESIKDEMTNLA-K 616

Query: 588 VNGKYPNALSM----LGDLELKNDDWVKAKETFRAASDAT--DGKDSYATLSLGNWNYFA 641
           +N       S     L +  LKN+   K KET          D  D YA +SLGN     
Sbjct: 617 MNDSDLEVRSFYAWYLKNTTLKNE---KEKETSYNKDTLVKYDSHDLYALISLGNLYCLI 673

Query: 642 ALRNEKRAPKLEATHLE-----KAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKD 696
           A    K    L+          KA +L+ +V+     N++AA G  ++ AE  +   + +
Sbjct: 674 AREGRKNVKSLKEQEKSKHSYLKAIQLFQKVLQIDPFNVFAAQGIAIIFAESKRLGAAVE 733

Query: 697 LFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKF-YYNTDAQILLY 755
           +  +V+++          DV INLA+       F+ A++ Y   L+KF      + IL  
Sbjct: 734 ILRKVRDSLDNE------DVHINLANCLLEMREFSKAIENYDLILKKFPNIKNKSHILNL 787

Query: 756 LARTHY-----------------------EAEQWQDCKKSLLRAIHLAPSNYTLRFDAGV 792
           L +  Y                       E E+ +D  K   R I +      L+F+  V
Sbjct: 788 LGKAWYARGLKEKNIDYFFKALSYTEMAIEFEENRDTSKKNERFIAI------LKFN--V 839

Query: 793 AMQKFS-ASTLQKTR---RTADEVRSTVAELENAVRVFSHLSAASNLHLHGFD--EKKIN 846
           A+  F  A TL+++    RT + +++ V  L+ A+ +   L    + ++   D  E++I 
Sbjct: 840 AILDFQIAETLRRSEKKDRTLEHLKTAVVGLDKAIVILKELKDLKDFNVILKDELEQRIQ 899

Query: 847 THVEYCKHLLDAAKIHREAAEREEQQNRQ 875
                 K +L+     R   E+E+ +N Q
Sbjct: 900 LGETTMKTVLE-----RCVTEQEQYENEQ 923


>gi|422293909|gb|EKU21209.1| ctr9 protein, partial [Nannochloropsis gaditana CCMP526]
          Length = 890

 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 97/368 (26%), Positives = 181/368 (49%), Gaps = 34/368 (9%)

Query: 525 VTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNE 584
           +T +FNLA + + + +  AA  L   I  +Y  +V A+++L  +A  + + + +   +  
Sbjct: 392 LTTVFNLAMIHQDMGELAAAEELLLAITKQYPSHVSAHIKLGILAHGQGHTKQAGSWLGR 451

Query: 585 ALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALR 644
           A ++  +     ++ G +E       +A+  F   +   D    YA ++LGN  +     
Sbjct: 452 ARQLAPQDKEVAAVCGKVEQDAGHRDQAQRLFEPLNKEGD---PYAMVALGNLYFM---- 504

Query: 645 NEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEK-GQFDVSKDLFTQVQE 703
           N    P  +A H+  A+  +T+V+ +   NLYAA+G G+VLAE+ G+ + ++ +   V+E
Sbjct: 505 NSVTVPD-KAHHMGHARVYHTKVLKKDARNLYAAHGLGLVLAEEFGKVEDARAVLQAVRE 563

Query: 704 AASGSVFVQMPD-VWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDA---QILLYLART 759
            +        PD + IN+AH++ AQ     A+  Y++ L+K   +TD    ++L Y++  
Sbjct: 564 RSGDK-----PDEILINIAHLFVAQKQRNAAIHCYESFLKKHRLSTDGLHVRVLEYVSHA 618

Query: 760 HYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAM-----QKFSASTLQKTRRTADEVRS 814
           H+    W+   +++L+A+H+ P    L F+ G+ +     + F  S  Q+T  +  E RS
Sbjct: 619 HFLERSWEKALRAILKALHVEPGKPALAFNVGLILDASVSESFKRSNAQRT-TSVSESRS 677

Query: 815 TVAELENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAE---REEQ 871
              +L  A+ V S    A           K+   V+Y K  L  A+ + +A E   RE++
Sbjct: 678 AERDLSVAISVLSRPELAQAY-------PKVKRKVDYMKANLQLARQYVQAEEKRFREDE 730

Query: 872 QNRQRQEA 879
           ++R RQ A
Sbjct: 731 ESRTRQAA 738


>gi|390602165|gb|EIN11558.1| TPR-like protein [Punctularia strigosozonata HHB-11173 SS5]
          Length = 1107

 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 95/369 (25%), Positives = 177/369 (47%), Gaps = 29/369 (7%)

Query: 13  EEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQILEE------- 65
           EEV + LD L  +  D+L+++K  +    +W  +A EY+K+G  ++   I +        
Sbjct: 21  EEVGIDLDDLDLNVEDLLEVIKDSRCSPWVWTTLALEYWKKGHADKAETIAQTAIESAQD 80

Query: 66  --GSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRI 123
             GS P I  + A+++         L +   +   + + ++ K  +   A  + NK++  
Sbjct: 81  SAGSKP-IHAFLANLQMANARRAPKLILPDPHQDDMRS-EKPKGHYHNEAAIHLNKSTSS 138

Query: 124 DMHEPS---TWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSD 180
           D    +   +++ +G   L    ++ A  +F+ VL A   NV ALLG+A + + R ++ +
Sbjct: 139 DADRRTQLLSFLTRGIHQLGTRSMDDALRSFESVLAAQPTNVVALLGKARIYYVRRQFKE 198

Query: 181 SLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVM 240
           SL  ++R L+++PSC    R+GIG+C ++L    KA+ A+QR+L+++P    A + L + 
Sbjct: 199 SLRLFQRVLELNPSCRPDPRVGIGMCLWQLDHKAKAKAAWQRSLEVNPTEWSAALLLGLE 258

Query: 241 DLQAN-------EAAGIR---KGMEKMQRAFE-IYPYCAMALNYLANHFFFTGQHFLVEQ 289
            + A+       +A  I     G + ++ AF+      A A N L + F   G +    +
Sbjct: 259 AINASKDELKHPDAERIHLFVTGTKYVESAFKGSNQRAAAAANVLCDVFLRKGAYDRAMK 318

Query: 290 LTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPH-EFIFPYYGL 348
           L E  +   +     +  Y +  R  H+KGD   A  Y+  + KE   PH + +    GL
Sbjct: 319 LAERTIQYADTLSVLTEGYIHAGRVSHAKGDVANATKYFETATKE---PHPKTVLASVGL 375

Query: 349 GQVQLKLGD 357
            Q+ +K G+
Sbjct: 376 AQMHVKKGE 384



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 90/430 (20%), Positives = 180/430 (41%), Gaps = 52/430 (12%)

Query: 525 VTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNE 584
            +VL+NLAR  E   +   A+  Y+ +L ++ +YVDA +R AA+    N    + +L+ +
Sbjct: 567 TSVLYNLARCYEDQGEQGMATEAYKKLLARHPEYVDAKIRQAAMLSDLNEKNEAHDLIKQ 626

Query: 585 ALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALR 644
           AL       N  +      ++   +  AK+         D  D +A  +  + +Y  A  
Sbjct: 627 ALSSQNGNLNLRAFYTHFLIEAGMYKPAKDFLYNTIKDFDRHDVHALCATAHIHYHQARE 686

Query: 645 NEKRAPKLEATH---LEKAKELYTRVIVQHTSNLYAANGAGVVLAE-------------- 687
           +   + +  A      ++A   Y   +        AA G  +V AE              
Sbjct: 687 SRDSSSQGIAERRKGFQRAAGFYENALSVDPMCAVAAQGLAIVTAEDALGTLNGALQPGA 746

Query: 688 ------KGQFDVSK--DLFTQVQEAA-SGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQ 738
                 K   D+    ++F++V+E    GSV+       +N+ H ++A+  +  A++ Y+
Sbjct: 747 PAPDPLKRATDLRDALEIFSKVRETLYDGSVY-------MNIGHCHYARDEYDRAIESYE 799

Query: 739 NCLRKFYYNTDAQILLYLARTHYEAEQ-------WQDCKKSLLRAIHLAPSNYTLRFDAG 791
              R+FY N +   LL L R+ Y                K    A++L P +  + ++  
Sbjct: 800 TASRRFYDNHNVAALLCLCRSWYAKANKELSFTAMNTALKYAQNALYLNPHDKAIVYNIA 859

Query: 792 VAMQKFSAS--TLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGFDEKKINTHV 849
           +  QK +    ++   +R+  ++   + +  +A ++F+ L++  +  L  ++ +  +   
Sbjct: 860 MIQQKAAELLFSIPPAKRSLADLEKAIGQATHAQKMFASLASDKSTPL-PYNIEIADQRR 918

Query: 850 EYCKHLLDAAKIHREAAEREEQQNRQRQEAA---------RQAALAEEARRKAEEQKKYL 900
            Y + +L   + H     + E ++R + +AA         RQ A+  E  ++ E   K L
Sbjct: 919 RYGESMLRRGEEHLATQRQYESEHRAKLDAARQRRMEERQRQEAMERERAQELEVAAKRL 978

Query: 901 LEKRKLEDEQ 910
            E+R+L  EQ
Sbjct: 979 AEERRLAREQ 988


>gi|261327024|emb|CBH09999.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
           DAL972]
          Length = 901

 Score =  109 bits (273), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 191/822 (23%), Positives = 334/822 (40%), Gaps = 93/822 (11%)

Query: 116 YYNKASRIDMHEPSTWVGKGQLLLAKG-EVEQASSAFKIVLEADRDNVPALLGQACVEFN 174
           Y   AS   +  P     +G   +  G  ++ AS  F+  L  D+  + A +G A V F 
Sbjct: 69  YMADASASPLSRPVLLYLEGVAAMTSGTSLQTASMKFEEALRVDKHFILARMGLAAVCFY 128

Query: 175 RGRYSDSLEFYKRALQ-VHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEA 233
              Y  S   Y+  L+ V  S PG +R+G+GLC Y+LG++  A +  +RAL ++ E+V A
Sbjct: 129 MKDYKRSFSHYRAVLETVGSSAPGIVRVGLGLCAYRLGRMDAAVKWLERALAVNGEDVAA 188

Query: 234 LVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTET 293
           L++L V+ L       I++ ++ ++R  +++P  AM L    +  +F             
Sbjct: 189 LLSLLVVYLAQRR---IKEVIDVVRRLRKVFPDNAMILLKTTDILYFRA----------- 234

Query: 294 ALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQL 353
                + G  K+     LA S           L+ ++  +   +  +     Y  G++ L
Sbjct: 235 ----VSQGRVKA-----LAPSI----------LHLLSEARPTARVEDAAIADYQEGRLLL 275

Query: 354 KLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAF 413
            LGDF  A    E  +++ P+          +   LG+  +A++LL +     P   +  
Sbjct: 276 ALGDFTRARVLLESSMQVLPNCLAARVHYARLLFLLGRDVEAEQLLLRINAEHPNQKEVL 335

Query: 414 IDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFK- 472
             L     +S  G    A + ++ L +      P +VL+        +   E + +    
Sbjct: 336 QMLAAH--ASHLGLHERALECSKLLTESVA---PGDVLSWTLAAWCSRLNSEESAKLLTH 390

Query: 473 -----DALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTV 527
                + LG  + + L     K  +     ++ +  + +L   F +     ELP N V +
Sbjct: 391 VLHIYEELGTPVPMKL--RANKASMCGDIGTLQKILESELGEDFLSKP---ELPVNYVPI 445

Query: 528 LFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALK 587
           ++N+ARLLE   D V A  LY  ++  +  +   Y RL  +AKA    + +I  +N   +
Sbjct: 446 VYNMARLLE-TSDKVRACELYCYLVKHHPCFSYPYFRLYELAKAERCWRKAIMWMNLLRQ 504

Query: 588 VNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRNEK 647
                P AL  +  L  +   +  A    R A      +     L+LG       LR+ +
Sbjct: 505 AIPDEPRALVYICLLFFEQRRYAAAMNILRLAKT----RSCVVALALGQ----IYLRHAQ 556

Query: 648 RAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASG 707
           +        LE AK+ +   + +   N+ AA+G    L  +G+ +    L  +V E    
Sbjct: 557 QHSGDSYRFLELAKDRFHFALQKDKGNVLAAHGMACCLGLEGRHESCLLLLDRVGEIVPN 616

Query: 708 SVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQ 767
             +V+      ++A+      +F  A+   Q   ++    + +     LA   +   ++ 
Sbjct: 617 CSYVR-KHYEAHMANAKILSDSFKQAIDYLQRDPQRAPLQSSS-----LAFCLFCEGRYA 670

Query: 768 DCKKSLLRAIHLAPSNYTLRFD-AGVAMQKFSASTLQKTRRT---ADEVRSTVAELENAV 823
           D      +A++  PS   LRF+ A +    F AS  QK  ++   A E+RS + E  N  
Sbjct: 671 DAIAVQKKAVNELPSEPLLRFNLALLYCASFVASISQKQEQSVQEAKELRSFLTEGLNIA 730

Query: 824 RVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLD------AAKIHREAAEREEQQNRQRQ 877
             F  + + S        +K +     YC H  D       A  HR A E E Q      
Sbjct: 731 HEFIKIESESRRLSEA--KKLLKQLCAYCVHHNDLSIPKVVANGHRAALEAERQD----- 783

Query: 878 EAARQAALAEEARRKAEE-QKKYLLEKRKLEDEQKRLRQQEE 918
                   AE  R   E  ++K +LE+R+L DE +R R+QE+
Sbjct: 784 --------AEWCRVYNEHLEQKRMLEERRLADEHQR-REQEQ 816


>gi|410075705|ref|XP_003955435.1| hypothetical protein KAFR_0A08660 [Kazachstania africana CBS 2517]
 gi|372462017|emb|CCF56300.1| hypothetical protein KAFR_0A08660 [Kazachstania africana CBS 2517]
          Length = 1095

 Score =  109 bits (272), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 195/847 (23%), Positives = 348/847 (41%), Gaps = 167/847 (19%)

Query: 6   IPVQNSEEEVRVALD-QLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQILE 64
           IP++ SEE V + L+  LP   SD+  +L  E +  + WL IA  Y  Q KV +  Q++ 
Sbjct: 23  IPLKASEELVSIDLETDLPDSPSDLRTLLVEENSDKEHWLSIAIAYCNQNKVIEGIQLIT 82

Query: 65  EGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIE--TKQREKEEHFILATQYYNKASR 122
                   E ++  +  + ++   L   Y  L K    +  + ++E+   A  +  +A  
Sbjct: 83  MAL-----EVFS--QSSQASLHTFLTWAYLKLAKQNEVSNPKLRQENLSNAENHLKEAIT 135

Query: 123 IDMHEPSTWVGKG----QLLLAKGEVEQA---SSAFKIVLEA-DRD-------NVPALLG 167
           +D     TWVG      +L   KG  ++A   S  F   ++A DR        N   LL 
Sbjct: 136 LD----PTWVGNMLATVELYYQKGHYDKALETSDLFMKSIQAEDRRTGKQSKLNCLFLLM 191

Query: 168 QACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLD 227
           +A + + +  Y+ SL+ ++  L  +P      R+GIGLC + L     A ++++R+L+++
Sbjct: 192 RAKLLYQKKNYTASLKLFQELLVSNPVLRPDSRIGIGLCFWHLKDYNMAIKSWERSLEIN 251

Query: 228 PENVEA--LVAL-----AVMDLQANE--AAGIRKGMEKMQRAFEIYPYC---AMALNYLA 275
            +N  A  LV L     ++ + + +E       K +  +   F    +       L  L 
Sbjct: 252 NKNNVASILVILGNYHKSLTNSENDEQFKENFTKTLTDLNSLFVDGSHNKENPALLTLLQ 311

Query: 276 NHFFFTGQHFLVEQLTETALAVTNHGPTKS--------HSYYNLARSYHSKGDYEKAGLY 327
           ++++F   +  V  +  T +     GP KS         S +   R+Y++  DY +A  +
Sbjct: 312 SYYYFKADYQKVVDIFNTKI-----GPKKSSTIDSILSESTFWTGRAYYALNDYRRAFSF 366

Query: 328 YMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYV 387
           +  S+K   K  + +   +G+GQ Q+K      ++  FE + +   +  E    LG +Y 
Sbjct: 367 FQESLK---KNEDNLLARFGVGQSQIKTNLVEESILTFENLYKTNENIQELNYVLGLLYS 423

Query: 388 --------------------------QLGQIEKAQELLRKAAKIDP-RDAQAFIDLGELL 420
                                     Q   I K+ + L K  K+   +  Q  +    L+
Sbjct: 424 AKCLNHDNATSSSIPNDTDNYISGKEQQKLINKSIQYLEKYIKLTKAKKNQLVVPRAYLV 483

Query: 421 IS------SDTGAALDAFKTARTLLKKAGEE-VPIEVLNNIGVIHFEKGEFESAHQSFKD 473
           IS      ++   +L+    A + +    E+ V +EVLNN+   +F   +FE A++ FK 
Sbjct: 484 ISQLYELQNNYKQSLEYLTDAMSEITFVNEKNVSLEVLNNLACFYFINNDFEKANEYFKK 543

Query: 474 ALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLAR 533
           A   G                                     N   L   K+T+ FN+AR
Sbjct: 544 AQERG------------------------------------SNDESL---KITLDFNIAR 564

Query: 534 LLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYP 593
            +E I D   +  +Y  I  K+  Y+ A +R        +N    I++ ++ LK+  +  
Sbjct: 565 TMESIGDINKSRSIYEDISTKHPHYLSAKIRDLYTKFVNDN----IDIEDDMLKLQNENK 620

Query: 594 NALSMLGDLELKN-DDWVKAKETFRAASDATD----------GKDSYATLSLGNWNYFAA 642
                 G+LE +    W    +  + AS  TD            D YA +SL N  Y   
Sbjct: 621 ------GNLECRAFYSWYLKNQADKDASKETDHNKDTLVKYDSHDLYALISLANL-YCTI 673

Query: 643 LRNEKRAP------KLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKD 696
            ++ K+ P      K + ++L KA +LY +V+     N++AA G  +V AE  +   + +
Sbjct: 674 AKDAKKHPNPKEQEKSKHSYL-KAIQLYQKVLQVDPLNVFAAQGIAIVFAESKRLGAALE 732

Query: 697 LFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTD--AQILL 754
           +F +V+++      +   DV IN  +      ++  A++ Y+  L KF    D  A +L 
Sbjct: 733 IFRKVRDS------INNFDVHINCGNSLLEMHDYPKAIETYEFVLNKFNNTRDKKAYLLN 786

Query: 755 YLARTHY 761
            L +  Y
Sbjct: 787 LLGKAWY 793


>gi|410730423|ref|XP_003671391.2| hypothetical protein NDAI_0G03710 [Naumovozyma dairenensis CBS 421]
 gi|401780209|emb|CCD26148.2| hypothetical protein NDAI_0G03710 [Naumovozyma dairenensis CBS 421]
          Length = 1121

 Score =  107 bits (268), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 231/1040 (22%), Positives = 416/1040 (40%), Gaps = 191/1040 (18%)

Query: 6    IPVQNSEEEVRV-ALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQILE 64
            IP++ SEE V +  L  LP D SD+  +L  E A  + WL IA  Y  QG+++   ++++
Sbjct: 30   IPLKASEELVSIDLLTDLPDDPSDLRTLLVEESASREHWLTIACSYVNQGRIDAGIELIK 89

Query: 65   EGSSPEIDEYYADVRYERIAILNALGVYYTYLG-----KIETKQREKEEHFILATQYYNK 119
               + ++D ++ D + +       +G +YT+L      K +   R  EE F    +Y N+
Sbjct: 90   --MALQVD-HFVDSKID-------MGHFYTFLTWCHLKKCKLVSRTIEEKF----KYLNE 135

Query: 120  ASRIDMHEP----STWV----GKGQLLLAKGEVEQA---SSAFKIVLEADRDNVPA---- 164
            A    + E      TWV        L   +G  ++A      F   L+ D  N+      
Sbjct: 136  AENC-LKEAIGINPTWVCNMLATVDLYYQRGHYDKALETCDLFVKGLQQDVTNLATTNAS 194

Query: 165  -----LLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQA 219
                 LL +A + F +  +  SL+ ++  L  +P      R+GIG C ++L     A  A
Sbjct: 195  PNCMFLLLRAKLLFRKKNFMASLKLFQELLVNNPVLKPDPRIGIGACFWQLKDYKMAINA 254

Query: 220  FQRALQLDP--ENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANH 277
            ++R+L+LDP  +N + L  L        ++    +  +  + A           N   N 
Sbjct: 255  WERSLELDPTNKNSKVLCLLGKFHKTLIDSGNDDEFKDNFKDAMIDLSNIYQTENGKENP 314

Query: 278  FFFT--------------GQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEK 323
               T                +   E++   +  VT+   ++S  +    R+Y++  DY +
Sbjct: 315  VLLTLLQSYYYYKGDYKKILNIYEERIKPISSIVTDTILSESTLW--CGRAYYALNDYRQ 372

Query: 324  AGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALG 383
            A   +  S+K   K  + +    GLGQ Q+K      ++  FE + +   +  E    LG
Sbjct: 373  AFAMFQESLK---KNEDNLLSKLGLGQTQIKTNLLEESVLTFENIYKTNENIQELNYILG 429

Query: 384  HIYV------------QLGQIEK--------------AQELLRKAAKIDPRDAQAFIDLG 417
             +Y             Q    EK              A + L K  K         +   
Sbjct: 430  LLYAGKCLDKKDSRNNQKNDTEKKNASNKELSIMNSKAIKYLEKYIKSTNSKRNQLVIPR 489

Query: 418  ELLISSDTGAALDAFKTARTLLKKAGEEV-----------PIEVLNNIGVIHFEKGEFES 466
               + S    + + +K +   L KA EEV           PIE+LNN+G  ++  G+   
Sbjct: 490  AYFVISQLYESTNQYKQSLEYLIKALEEVKFVKNGRIDDVPIELLNNLGSFYYMNGDM-- 547

Query: 467  AHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVT 526
                                KTK Y       + + K         +  N   L    +T
Sbjct: 548  -------------------IKTKEYF-----QLAKEKLTSGSSLSSSTENESTL----IT 579

Query: 527  VLFNLARLLE-QIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEA 585
            V +N+AR LE +  +   A  LY  IL K+ +Y+ A +R     K  N+++    + NE 
Sbjct: 580  VNYNIARSLESEPENITKAQELYEDILSKHPNYISAKIR-NLFYKYLNHVEDPKMIENEM 638

Query: 586  LKVNGKYPNALSMLG--DLELKNDDWVKAKETFRAASDAT-----DGKDSYATLSLGNWN 638
              +N    + L +       LK +   + +E  + + +       D  D YA +SLGN  
Sbjct: 639  ESLNDNNESNLEIRSFYSWFLKKNTTTQKREEKQTSYNKDTLVKYDSHDLYALISLGNLY 698

Query: 639  YFAA---LRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSK 695
                    +N K   K + ++L K+ +L+ +V+     N++AA G  ++ AE  +   + 
Sbjct: 699  CIIGRECRKNVKEQEKSKHSYL-KSIQLFQKVLQIDPMNVFAAQGIAIIFAESKRLGPAL 757

Query: 696  DLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKF-YYNTDAQILL 754
            ++  +V+++      +   DV INLA+       F  A++ Y   L+KF   +  + IL 
Sbjct: 758  EILRKVRDS------IDNEDVHINLANCLLEMREFNKAIENYDLILKKFPKISNKSHILN 811

Query: 755  YLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDA---------------GVAMQKFS- 798
             LA+T Y     +   +   +A  L  +   ++F+                 VA+  F  
Sbjct: 812  LLAKTWYSRGLKEKKIEFFFKA--LVNTEDAIKFENVKETKNERFLSILKFNVALLNFQI 869

Query: 799  ASTLQKT----RRTADEVRSTVAELENAVRVFSHLSAASNLHLHGFD--EKKINTHVEYC 852
            A TL+++    RR  D ++ +V  L++A+ +   L+ + + ++   +  E++I       
Sbjct: 870  AETLRRSNVKERRIKD-LQKSVKGLDDAINILKELNVSKDFNIIPKEELEQRIQLGETTM 928

Query: 853  KHLLDAAKIHREAAEREEQQNRQRQEAARQAALAEEARRKAEEQKKYLL----------- 901
            K++L+   + +E  ER+     Q+ +      L EE   K +EQ                
Sbjct: 929  KNVLERCLMEQEQYERD-----QKNKLLEARKLLEEQELKVKEQLSKEEEEKRLKLEKQT 983

Query: 902  -EKRKLEDEQKRLRQQEEHF 920
             E ++L+DE ++L Q+ E  
Sbjct: 984  EEYKRLQDEAQKLIQERESL 1003


>gi|342180304|emb|CCC89781.1| unnamed protein product, partial [Trypanosoma congolense IL3000]
          Length = 663

 Score =  106 bits (264), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 135/618 (21%), Positives = 257/618 (41%), Gaps = 84/618 (13%)

Query: 115 QYYNKASRIDMHEPSTWVGKGQLLLAKG-EVEQASSAFKIVLEADRDNVPALLGQACVEF 173
           QY   A+   +H P+    +G   +A G   + AS  F+  +  D   + A LG A V F
Sbjct: 74  QYMADAAASHLHRPAVLYLEGVAAMAGGTNFQTASVKFEEAIRIDPHFILARLGLAAVCF 133

Query: 174 NRGRYSDSLEFYKRALQVH-PSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 232
             GRY +S   Y+  L+    S P  +R+G+GLC Y LG+L  A +   RAL++DP +  
Sbjct: 134 YMGRYKNSFSHYRAVLETFGSSAPSIVRVGMGLCSYHLGRLEYAVKWLDRALEVDPNDAT 193

Query: 233 ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTE 292
           AL+AL V+ L       + K +E +QR   + P  A+ L  +A+  +F      V +   
Sbjct: 194 ALLALLVISLNQRR---MLKVVEVVQRLRTVLPDNAVVLLKVADLLYFRA----VSEKRV 246

Query: 293 TALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQ 352
            AL+ T                           L  + SV+ +    E     Y  G++ 
Sbjct: 247 KALSRTI--------------------------LRLLTSVRHVASAEESAIADYQEGRLL 280

Query: 353 LKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQA 412
           + LG+  +A T  E  +++ P+          + +  G+  +A++LL +     P   + 
Sbjct: 281 VALGELANARTLLESSMQVLPNLLAARIHYARLLLLSGRDMEAEQLLLRINAEHPNQKEV 340

Query: 413 F----------------IDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGV 456
                            ++  +LL  S     + ++  A    +  G+E   ++L N+  
Sbjct: 341 LQMLAAQASRLGLLGRALECSKLLTDSIAPGDIRSWSLAAWCARLNGDESK-KLLGNLVR 399

Query: 457 IHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDA--SASMLQFKDMQLFHRFEND 514
           IH E GE  + +     A  +       D +    ++D+   A  L    + + H     
Sbjct: 400 IHKEVGEPVTMNMLVNVASVNR------DVEALQRILDSELGADFLSTPKLSVAH----- 448

Query: 515 GNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNN 574
                     V +++NLA LLE+  D   +  LY  ++ ++  +   Y+RL  +A+A   
Sbjct: 449 ----------VPLVYNLALLLEK-DDPERSRKLYIFLVKQHGHFRLPYIRLHVLARAAGR 497

Query: 575 LQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSL 634
           L+ ++  +    ++    P+++  + +L  +   +  A    R+A    +G+     L+L
Sbjct: 498 LREAVSWMVLVQQILPDEPHSIVSIAELYFRQKRFAVAMFILRSA----EGRSLPVALAL 553

Query: 635 GNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVS 694
           G+   +   + +K + +     +E A++ +  V+ +   N+ AA+G        G++D  
Sbjct: 554 GSIYLWCGQQRDKDSRRF----VEVARDRFAYVLRKDKGNVLAAHGLACCFGLVGEYDNC 609

Query: 695 KDLFTQVQEAASGSVFVQ 712
           + L  +V E      +V+
Sbjct: 610 QSLLDRVGEVLPNCDYVR 627


>gi|253998548|ref|YP_003050611.1| hypothetical protein Msip34_0836 [Methylovorus glucosetrophus
           SIP3-4]
 gi|253985227|gb|ACT50084.1| Tetratricopeptide TPR_2 repeat protein [Methylovorus glucosetrophus
           SIP3-4]
          Length = 927

 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 116/477 (24%), Positives = 202/477 (42%), Gaps = 66/477 (13%)

Query: 93  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 152
           Y  LG I +++R+ EE    A   +  A R+           G  L+    VE+A   +K
Sbjct: 246 YNNLGNIFSRKRQFEE----ALSCFENAIRLQPTYLKAHCNAGNALIDLERVEEAIHHYK 301

Query: 153 IVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAI-RLGIGLCRY--- 208
             LE   D+  A            RY++++  Y+RA+ + P+   AI  LGI LC     
Sbjct: 302 KALEIHPDHAEAHNSLGIAYSKLSRYNEAIASYQRAIALMPNYAEAICNLGITLCATLEV 361

Query: 209 -----------------------------KLGQLGKARQAFQRALQLDPENVEALVALAV 239
                                         LG+  +A   ++ AL+L  +N + + ALA 
Sbjct: 362 EAAIPLLKQSLAIYADNLIAHVHLAETYAVLGRFEEAAPHYEYALKLSEKNPQLINALAN 421

Query: 240 MDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTN 299
           + ++  +    +   E  +RA EI P    ALN L N       H  + Q  E  L    
Sbjct: 422 IYVKTGQHDLAK---EYFERALEIDPRFTDALNNLGN---LHHSHDRISQAIECYLKSIA 475

Query: 300 HGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFR 359
             P  + +Y NL  SY S  DYEKA   Y  +++      ++   YY LG  Q+++  FR
Sbjct: 476 IKPDSARAYSNLGNSYSSLKDYEKAIDAYKTAIR---LDPQYSDAYYNLGTAQMEIKQFR 532

Query: 360 SALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGEL 419
            A+ ++++VLEI PD+ + +  LG  +  L + ++A+E+  K    +    +A+ ++G +
Sbjct: 533 DAIYSYKQVLEIEPDSVKAMNNLGVAHTALNEFKQAEEIFSKVFSYETGHLEAYGNMGNV 592

Query: 420 LISSDT-GAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSF------K 472
             S++    ++  ++ A  +  K       E L N+G+++  +G+FE   + +      +
Sbjct: 593 CCSNNQLEESIKWYEKALEIDAKNP-----ETLWNLGLVYLRQGDFEQGWKHYEVRWDRR 647

Query: 473 DA-----LGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGN---HVELP 521
           DA         +WL       K  +I A   +  F  M  +    N+ N   ++E P
Sbjct: 648 DAKPVTPTPYPLWLGEFSISGKNLLIQAEQGLGDFIQMLRYMTILNEMNVSCYIETP 704



 Score = 79.3 bits (194), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 129/584 (22%), Positives = 251/584 (42%), Gaps = 82/584 (14%)

Query: 89  LGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQAS 148
           LGV +  LG++E            AT  Y +A R++      +   G +L A+G+  +A+
Sbjct: 113 LGVSHAALGQLEP-----------ATASYKEAIRLNPAYIKAYRNLGVVLEAQGKHTEAT 161

Query: 149 SAFKIVLEADRDNVPALLGQACVEFN-RGRYSDSLEFYKRALQVHPS-----CPGAIRLG 202
           +A++ +L+   D+  A   Q  + F+ + ++ +++  Y RA++++P      C  AI LG
Sbjct: 162 AAYQSLLKFRPDDAEAH-HQLAINFSTQKKFDEAIIHYSRAIEINPEFVDAYCNKAIALG 220

Query: 203 IGLCRYKLGQLGKARQAFQRALQLDPENV-----------------EAL------VALAV 239
                 KL +L  A   ++ A++L P+                   EAL      + L  
Sbjct: 221 ------KLNKLEDAILMYKAAIELVPDEASIYNNLGNIFSRKRQFEEALSCFENAIRLQP 274

Query: 240 MDLQANEAAG--------IRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLT 291
             L+A+  AG        + + +   ++A EI+P  A A N L   +    ++       
Sbjct: 275 TYLKAHCNAGNALIDLERVEEAIHHYKKALEIHPDHAEAHNSLGIAYSKLSRYNEAIASY 334

Query: 292 ETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQV 351
           + A+A+    P  + +  NL  +  +  + E A      S+       + +  +  L + 
Sbjct: 335 QRAIALM---PNYAEAICNLGITLCATLEVEAAIPLLKQSLAIYA---DNLIAHVHLAET 388

Query: 352 QLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQ 411
              LG F  A  ++E  L++   N + + AL +IYV+ GQ + A+E   +A +IDPR   
Sbjct: 389 YAVLGRFEEAAPHYEYALKLSEKNPQLINALANIYVKTGQHDLAKEYFERALEIDPRFTD 448

Query: 412 AFIDLGELLISSD-TGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQS 470
           A  +LG L  S D    A++ +  +  +   +         +N+G  +    ++E A  +
Sbjct: 449 ALNNLGNLHHSHDRISQAIECYLKSIAIKPDSA-----RAYSNLGNSYSSLKDYEKAIDA 503

Query: 471 FKDALGDGIWLTLLDSK-TKTYVIDASASM--LQFKDMQLFHRFENDGNHVELPWNKVTV 527
           +K A+        LD + +  Y    +A M   QF+D    ++       +E+  + V  
Sbjct: 504 YKTAIR-------LDPQYSDAYYNLGTAQMEIKQFRDAIYSYK-----QVLEIEPDSVKA 551

Query: 528 LFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALK 587
           + NL      +++   A  ++  +      +++AY  +  +  + N L+ SI+   +AL+
Sbjct: 552 MNNLGVAHTALNEFKQAEEIFSKVFSYETGHLEAYGNMGNVCCSNNQLEESIKWYEKALE 611

Query: 588 VNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYAT 631
           ++ K P  L  LG + L+  D+ +  + +    D  D K    T
Sbjct: 612 IDAKNPETLWNLGLVYLRQGDFEQGWKHYEVRWDRRDAKPVTPT 655



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 131/589 (22%), Positives = 231/589 (39%), Gaps = 62/589 (10%)

Query: 177 RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVA 236
           +Y  ++  Y +A+ + P    A    +G+    LGQL  A  +++ A++L+P  ++A   
Sbjct: 88  QYPQAIASYMQAIALKPDRAEAY-YNLGVSHAALGQLEPATASYKEAIRLNPAYIKAYRN 146

Query: 237 LAVMDLQANEAAGIR-KGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETAL 295
           L V+     EA G   +     Q   +  P  A A + LA    F+ Q    E +   + 
Sbjct: 147 LGVV----LEAQGKHTEATAAYQSLLKFRPDDAEAHHQLA--INFSTQKKFDEAIIHYSR 200

Query: 296 AVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKL 355
           A+  + P    +Y N A +       E A L Y A+++ +  P E    Y  LG +  + 
Sbjct: 201 AIEIN-PEFVDAYCNKAIALGKLNKLEDAILMYKAAIELV--PDEASI-YNNLGNIFSRK 256

Query: 356 GDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFID 415
             F  AL+ FE  + + P   +     G+  + L ++E+A    +KA +I P  A+A   
Sbjct: 257 RQFEEALSCFENAIRLQPTYLKAHCNAGNALIDLERVEEAIHHYKKALEIHPDHAEAHNS 316

Query: 416 LGELLIS-SDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDA 474
           LG      S    A+ +++ A  L+    E +      N+G+      E E+A       
Sbjct: 317 LGIAYSKLSRYNEAIASYQRAIALMPNYAEAI-----CNLGITLCATLEVEAA------- 364

Query: 475 LGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVE----LPWNKVTVLFN 530
                 + LL      Y  +  A +   +   +  RFE    H E    L      ++  
Sbjct: 365 ------IPLLKQSLAIYADNLIAHVHLAETYAVLGRFEEAAPHYEYALKLSEKNPQLINA 418

Query: 531 LARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNG 590
           LA +  +      A   +   L     + DA   L  +  + + +  +IE   +++ +  
Sbjct: 419 LANIYVKTGQHDLAKEYFERALEIDPRFTDALNNLGNLHHSHDRISQAIECYLKSIAIKP 478

Query: 591 KYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGN------------WN 638
               A S LG+      D+ KA + ++ A    D + S A  +LG             ++
Sbjct: 479 DSARAYSNLGNSYSSLKDYEKAIDAYKTAIR-LDPQYSDAYYNLGTAQMEIKQFRDAIYS 537

Query: 639 YFAALRNEKRAPK----LEATH-----LEKAKELYTRVIVQHTSNLYAANGAGVVLAEKG 689
           Y   L  E  + K    L   H      ++A+E++++V    T +L A    G V     
Sbjct: 538 YKQVLEIEPDSVKAMNNLGVAHTALNEFKQAEEIFSKVFSYETGHLEAYGNMGNVCCSNN 597

Query: 690 QFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQ 738
           Q + S   + +  E     +  + P+   NL  VY  QG+F    K Y+
Sbjct: 598 QLEESIKWYEKALE-----IDAKNPETLWNLGLVYLRQGDFEQGWKHYE 641



 Score = 43.9 bits (102), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 35/122 (28%), Positives = 56/122 (45%), Gaps = 8/122 (6%)

Query: 356 GDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFID 415
           G+   A   + +VLE  P+N + L  LG  Y+Q     +   +++KA + +PR A A  +
Sbjct: 19  GNLMEAQNYYSQVLEESPENPDALHLLGVTYMQSRDYARCIPVIQKALEYNPRHADAHYN 78

Query: 416 LGELLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKD 473
           LG          A+  +  A     +A    P   E   N+GV H   G+ E A  S+K+
Sbjct: 79  LGIAF------GAVRQYPQAIASYMQAIALKPDRAEAYYNLGVSHAALGQLEPATASYKE 132

Query: 474 AL 475
           A+
Sbjct: 133 AI 134


>gi|258571672|ref|XP_002544639.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
 gi|237904909|gb|EEP79310.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
          Length = 1117

 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 213/1013 (21%), Positives = 387/1013 (38%), Gaps = 244/1013 (24%)

Query: 2   ACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQ 61
           + + IP  + + EV ++L++LP D +++  +L  EQA  + W+IIA  Y K  +++   +
Sbjct: 34  SAIDIPASSFDTEVEISLEELPEDPTELCTLLDNEQASKNFWVIIALAYAKHNQLDLSIE 93

Query: 62  ILEEGSSPEIDEYYADVRYERIAILNALGVYYTYL------------GKIETKQREKEEH 109
           IL  G    I         E++ +L+   + + YL            G++ ++ R K+ +
Sbjct: 94  ILNRG----IASLPHGASNEKLGLLS--WICWIYLLKSRQAPRVAPEGQLLSEARTKDYY 147

Query: 110 FILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLE-----ADRDNVPA 164
              AT   N+A R++   P  ++ +G L L +  ++  +   K V++     +D   V  
Sbjct: 148 LQAATATVNEAYRLNPAFPPFFLARGVLSLLRASLQPPA---KAVVQGRTTCSDESKVAN 204

Query: 165 LLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRAL 224
           +L  A    +  R+S +           PS  G++        YKL       Q  Q+A 
Sbjct: 205 ILLAAYYLHDSSRHSTT----------DPSF-GSL--------YKLAMT----QYTQKAF 241

Query: 225 QLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY-CAMALNYLANHFFFTGQ 283
           +LD E                                  YP  CAM   Y     F   +
Sbjct: 242 KLDKE----------------------------------YPMTCAMFGGY-----FLLRR 262

Query: 284 HF-LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFI 342
           HF  VE L   A+ +T+     S  +Y LAR  H +GD  KA  YY  + +      +  
Sbjct: 263 HFPTVEALARKAIELTDVNAIASDGWYLLARKEHEEGDPAKAQEYYNRADQARGGSDKGY 322

Query: 343 FP-YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQ------------- 388
            P  +G  Q+Q++  D   A    EK+++    N E +  LG +Y +             
Sbjct: 323 LPAKFGAVQMQIRSQDKDGAKFRLEKIVQ-QKKNPEAMTLLGSLYAEEVFEVANSANKED 381

Query: 389 -LGQIEKAQELLR--------KAAKIDPRDAQAFIDLGEL-------------------- 419
              +I+KA  LL         +  KI P D    + L  L                    
Sbjct: 382 KSAEIKKATSLLEAVRASWKDEKKKISP-DISVLLYLARLYETTAPEKSMQCLSQIEQIQ 440

Query: 420 ---LISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALG 476
              +  SD    ++  +    +L+   E +  ++LNN+G   ++  + E A   F+ AL 
Sbjct: 441 LAQIPDSDKPDDVEGEEAMTNILR---ERLAPQLLNNMGCFLYQADKIEQARNMFQTALN 497

Query: 477 DGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLE 536
             +     D  T T  +                                T+ +NL R  E
Sbjct: 498 ACVKTQEKDDGTDTDAL------------------------------VTTISYNLGRTYE 527

Query: 537 QIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNAL 596
                  A  +Y  +L ++ DY +A  RL  ++  ++      + + +  + +       
Sbjct: 528 AAGLPEEAEKVYEGLLKRHGDYSEANARLTYMSLRQSPTDEGPKKMAKLYEADATNLEVR 587

Query: 597 SMLGDLELKNDDWVKAKETFRAASDATDGK--------------DSYATLSLGNWNYFAA 642
           ++ G        W   K   R A+ A D +              D YA   +GN +  AA
Sbjct: 588 ALFG--------WYLNKSKRRTANIAEDHEQRHYKHTLLGYDKHDRYALTGMGNVHLMAA 639

Query: 643 L---RNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAE-KGQFDVSKDLF 698
               R+ ++  +      ++A E + + +     N YAA G  + L + K  F  +  +F
Sbjct: 640 RDMRRDGEQDRERRRKMYDRAVEFFDKALQLDPKNAYAAQGIAIALVDDKKDFSTAVQIF 699

Query: 699 TQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCL-RKFYYNTDAQILLYLA 757
           ++V+++      ++   V++NL HV+     F+ +++   +CL R ++     +  +   
Sbjct: 700 SKVRDS------IRDASVYLNLGHVFAELRQFSKSIENILSCLGRVWFLKGKQERSIASM 753

Query: 758 RTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFS--ASTLQKTRRTADEVRST 815
           +T  E  Q         RA  +AP    L F+      + +  AS L +T++T+ E+   
Sbjct: 754 KTALEYAQ---------RARSVAPEQKHLDFNLAFVQNEIAHLASNLPETQKTSQEIEEA 804

Query: 816 VAELENAVRVFSHLSAASN-----LHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREE 870
           +  LE AV  F  ++ A N     + L        NT +   +  L + K +       E
Sbjct: 805 LGGLEEAVATFEKIAKAPNPPYPPISLEQRANMIKNTTINQLQRALQSQKEY-------E 857

Query: 871 QQNRQRQEAARQAALA-----------------EEARRKAEEQKKYLLEKRKL 906
           ++N  + + AR+A  A                 E  R+ AEE+++ + E ++L
Sbjct: 858 EKNAAKLQQAREAREAEQKRREEERRKLEEAEAERKRQIAEERQRMVEEAQRL 910


>gi|118387255|ref|XP_001026739.1| TPR Domain containing protein [Tetrahymena thermophila]
 gi|89308506|gb|EAS06494.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
          Length = 1417

 Score =  103 bits (256), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 156/737 (21%), Positives = 303/737 (41%), Gaps = 113/737 (15%)

Query: 43  WLIIAREYFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETK 102
           ++ IAR YF Q  +++  + LE+    EID  YA+  YER             LG +   
Sbjct: 80  YVSIARVYFNQDNLDESIKFLEKAI--EIDPNYAEA-YER-------------LGWVYEN 123

Query: 103 QREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNV 162
           Q   ++    A   Y KA  ID +   +    G +  ++G++++    +K +LE D +N+
Sbjct: 124 QNLIDQ----AIDSYKKAIEIDPNHLDSHYSLGVVYESQGKIDEGIEHYKKMLEIDPNNI 179

Query: 163 PALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQR 222
            AL+  +   F    + D+++   + +++ P    A    +G       ++ +A Q +Q+
Sbjct: 180 KALINLSRNYFCDLMHEDAIKCLNKVIEIEPKNKVAYE-RLGFIYENQNKIDEAIQNYQK 238

Query: 223 ALQLDPENVEALVALAVMDLQAN---EAA-GIRKGME---KMQRAFEIYPYCAMALNYLA 275
            ++LDP      ++L  M    N   EA   ++KG++   K  +A+E   Y     N   
Sbjct: 239 VIELDPNFQSVYISLGFMYFTKNMDEEAIECLKKGIQINPKFVQAYERLGYVYQMKNMTE 298

Query: 276 NHF------------FFTGQ------HFLVEQLTETALAVTNH---GPTKSHSYYNLARS 314
             F            +F  Q      ++ ++ + E  +   N     P   +++YNL   
Sbjct: 299 EAFEYYKKAIEIDPKYFEAQFNLGLLYYNLKMVNEAEVCYLNALQIDPLDIYTHYNLGLV 358

Query: 315 YHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPD 374
           Y +K  ++KA   Y  ++ E+N   +++  Y   G + L+      A+  ++K+LE+ P+
Sbjct: 359 YETKKMFDKALSCYQKAI-ELNP--KYLNAYIRSGNIYLETKKQDDAIQCYQKILELDPN 415

Query: 375 NCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG----------ELLISSD 424
             + +  LG +Y +   ++++ E  +KA +IDP   +A  +LG          + + S +
Sbjct: 416 YVDAINNLGIVYEEKKMLDESMECYKKALQIDPLYVKAHYNLGIVYELKKMHDQAIESYE 475

Query: 425 TGAALDA------------------FKTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEF 464
               +D                     +A    KKA E  P  +   NNIG+++++K  F
Sbjct: 476 RAIEIDPKYINAYNKLGNIYLDKKILYSALNYYKKALEIDPNYVNAYNNIGLVYYDKKMF 535

Query: 465 ESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNK 524
           + A +S+  A      + +     + Y        L+ +      ++E     +EL    
Sbjct: 536 DEALESYNKA------IEINPKYNQAYYNSGLVYELKNQKETAIEKYE---KAIELSPKY 586

Query: 525 VTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNE 584
           ++ L  LA +             ++ IL    D V    RL  I     N   ++    +
Sbjct: 587 ISALIRLADIYADSQQYQRGIECFKRILEITPDSVYDNYRLGYIYYCLKNFDEAMYYYKK 646

Query: 585 ALKVNGKYPNALSMLGDLELKNDDWVKA-----------KETFRAASDA----------T 623
           AL++N  Y NA++ +G +     ++ +A           K  F+A  ++           
Sbjct: 647 ALEINPNYINAINNVGLVYYNQKNYEEALKCYEKAIEIDKNYFQAHYNSGILYEAKKMID 706

Query: 624 DGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGV 683
           +  D Y  +   N NYF+AL        L+    + A E + +++    + + A N  G+
Sbjct: 707 EALDCYKKVMEINPNYFSALIRSGNI-YLDKYMTDNALECFKKILEIDPNYIDAINNLGI 765

Query: 684 VLAEKGQFDVSKDLFTQ 700
           V  +K  FD + D + +
Sbjct: 766 VYEDKQMFDEAIDCYIK 782



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 158/764 (20%), Positives = 321/764 (42%), Gaps = 82/764 (10%)

Query: 109 HFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQ 168
           +F  A +Y+N+   I+++        G     + +++QA   +K V+  +   + A +  
Sbjct: 24  NFDEAVEYFNRVLNINLNHEDANYNLGFTYEKQDKLDQALECYKKVISINPSYIKAYVSI 83

Query: 169 ACVEFNRGRYSDSLEFYKRALQVHPSCPGAI-RLGIGLCRYKLGQLGKARQAFQRALQLD 227
           A V FN+    +S++F ++A+++ P+   A  RLG       L  + +A  ++++A+++D
Sbjct: 84  ARVYFNQDNLDESIKFLEKAIEIDPNYAEAYERLGWVYENQNL--IDQAIDSYKKAIEID 141

Query: 228 PENVEALVALAVMDLQANEAAG-IRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFL 286
           P ++++  +L V+     E+ G I +G+E  ++  EI P    AL  L+ ++F    H  
Sbjct: 142 PNHLDSHYSLGVV----YESQGKIDEGIEHYKKMLEIDPNNIKALINLSRNYFCDLMH-- 195

Query: 287 VEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYY 346
            E   +    V    P    +Y  L   Y ++   ++A   Y    K I     F   Y 
Sbjct: 196 -EDAIKCLNKVIEIEPKNKVAYERLGFIYENQNKIDEAIQNYQ---KVIELDPNFQSVYI 251

Query: 347 GLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKID 406
            LG +         A+   +K ++I P   +  + LG++Y      E+A E  +KA +ID
Sbjct: 252 SLGFMYFTKNMDEEAIECLKKGIQINPKFVQAYERLGYVYQMKNMTEEAFEYYKKAIEID 311

Query: 407 PRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLN--NIGVIHFEKGEF 464
           P+  +A  +LG L  +      L     A      A +  P+++    N+G+++  K  F
Sbjct: 312 PKYFEAQFNLGLLYYN------LKMVNEAEVCYLNALQIDPLDIYTHYNLGLVYETKKMF 365

Query: 465 ESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKD----MQLFHR-FENDGNHVE 519
           + A   ++ A+        L+ K     I +    L+ K     +Q + +  E D N+V+
Sbjct: 366 DKALSCYQKAIE-------LNPKYLNAYIRSGNIYLETKKQDDAIQCYQKILELDPNYVD 418

Query: 520 LPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSI 579
              N + +++   ++L++  +    ++    +      YV A+  L  + + +     +I
Sbjct: 419 -AINNLGIVYEEKKMLDESMECYKKALQIDPL------YVKAHYNLGIVYELKKMHDQAI 471

Query: 580 ELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGK-DSYATLSLGNWN 638
           E    A++++ KY NA + LG++ L       A   ++ A +      ++Y  + L  ++
Sbjct: 472 ESYERAIEIDPKYINAYNKLGNIYLDKKILYSALNYYKKALEIDPNYVNAYNNIGLVYYD 531

Query: 639 ---YFAALRNEKRA----PKLEATHL------------EKAKELYTRVIVQHTSNLYAAN 679
              +  AL +  +A    PK    +             E A E Y + I      + A  
Sbjct: 532 KKMFDEALESYNKAIEINPKYNQAYYNSGLVYELKNQKETAIEKYEKAIELSPKYISALI 591

Query: 680 GAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQN 739
               + A+  Q+    + F ++ E    SV+         L ++Y+   NF  AM  Y+ 
Sbjct: 592 RLADIYADSQQYQRGIECFKRILEITPDSVYDNY-----RLGYIYYCLKNFDEAMYYYKK 646

Query: 740 CL--RKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKF 797
            L     Y N    + L     +Y  + +++  K   +AI +  + +   +++G+     
Sbjct: 647 ALEINPNYINAINNVGL----VYYNQKNYEEALKCYEKAIEIDKNYFQAHYNSGI----- 697

Query: 798 SASTLQKTRRTADEVRSTVAE-LENAVRVFSHLSAASNLHLHGF 840
               L + ++  DE      + +E     FS L  + N++L  +
Sbjct: 698 ----LYEAKKMIDEALDCYKKVMEINPNYFSALIRSGNIYLDKY 737



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 164/705 (23%), Positives = 278/705 (39%), Gaps = 106/705 (15%)

Query: 45   IIAREYFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYY----------- 93
            I   +Y     +E F++ILE      ID  Y D        +N LG+ Y           
Sbjct: 732  IYLDKYMTDNALECFKKILE------IDPNYIDA-------INNLGIVYEDKQMFDEAID 778

Query: 94   TYLGKIETKQREKEEHFILATQYYNK------------ASRIDMHEPSTWVGKGQLLLAK 141
             Y+  I+      + H+ L   Y NK               ID    S +   G + L +
Sbjct: 779  CYIKAIQINPNYVKAHYNLGVLYENKFKFDDALACFLKVIEIDPKYMSAYNRAGNIYLDR 838

Query: 142  GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 201
               E+A   +K  LE D   V A      + +N+ +  D+LE+Y +ALQ++P+   A + 
Sbjct: 839  QMNEKALEFYKKALEIDPTYVNAYNNIGLIFYNQRKLDDALEYYDKALQINPNYFQA-QY 897

Query: 202  GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVM----DLQANEAAGIRKGMEKM 257
              GL      Q   A   + RAL+++P    A + L  +     ++  E   ++K  E+ 
Sbjct: 898  NSGLVYELKFQNELAILCYTRALEINPNYTNAQIRLENILLKDGIKQEELEVLKKKAEEN 957

Query: 258  QRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHS 317
                E Y        Y   + ++T  +F +++            P  S +Y  L   Y  
Sbjct: 958  TNNPEDY--------YKLGYVYYT--NFNMDEAISCLNKAIEINPNYSEAYDKLGLIYEE 1007

Query: 318  KGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCE 377
            K   EKA  YY  +++  +K    I    GLG + L       A+  +   LE+ P + +
Sbjct: 1008 KKMDEKAIEYYKKAIEIDSKCFNAIN---GLGNIYLDQKLTAEAIKCYMAALELDPKSVK 1064

Query: 378  TLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTART 437
            T   LG  +      ++A    +KA ++DPR   A+ +LG  LI    G   DA     T
Sbjct: 1065 THYNLGISFEDERNYDQAVYHYKKAVELDPRYINAYNNLG--LIYEMKGKLDDAL----T 1118

Query: 438  LLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDA--LGDGIWLTLLDSKT--KTY 491
              +KA E  P  +   NN+G++++ + + E A  +++ A  L    +  L +S    +TY
Sbjct: 1119 CYQKALEINPNYVNAHNNVGLVYYAQNKMEDALINYRKALELNPNYYQALYNSGLIYETY 1178

Query: 492  VIDASASMLQFKDM-----QLFHRFENDGN-----------------HVELPWNKVTVLF 529
                  ++  +K +     + F  +   GN                  +E+  N +  + 
Sbjct: 1179 YKQIDQAIAFYKRVIELSPKYFSAYIRLGNIYLDSKMMDEALDCYQRILEIDPNYIDAIN 1238

Query: 530  NLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVN 589
            NL  + E+      A   YR  +     Y  AY  +  I + +N    +I      ++++
Sbjct: 1239 NLGIVYEEKEMLDEALKCYRRAIELNPKYTKAYYNMGIIYEDQNKFDDAINCYKTIIELD 1298

Query: 590  GKYPNALSMLGD--LELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRNEK 647
             KY NA++ LG+  L+L+NDD  +A   ++ A +              N NY  A  N  
Sbjct: 1299 PKYINAINRLGNIYLDLQNDD--EALACYQKALEI-------------NPNYLYAFYNLG 1343

Query: 648  RAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFD 692
                 E   + KA + Y +VI      +      GV+  EK Q +
Sbjct: 1344 LVYS-EKKKIGKAIQCYQKVISIDPKYIDGYINLGVIFDEKKQMN 1387



 Score = 79.7 bits (195), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 155/714 (21%), Positives = 279/714 (39%), Gaps = 115/714 (16%)

Query: 117  YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 176
            Y K   I+ +  S  +  G + L K   + A   FK +LE D + + A+     V  ++ 
Sbjct: 712  YKKVMEINPNYFSALIRSGNIYLDKYMTDNALECFKKILEIDPNYIDAINNLGIVYEDKQ 771

Query: 177  RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEAL-- 234
             + ++++ Y +A+Q++P+   A    +G+      +   A   F + +++DP+ + A   
Sbjct: 772  MFDEAIDCYIKAIQINPNYVKA-HYNLGVLYENKFKFDDALACFLKVIEIDPKYMSAYNR 830

Query: 235  VALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLT--E 292
                 +D Q NE     K +E  ++A EI P    A N +     F  Q  L + L   +
Sbjct: 831  AGNIYLDRQMNE-----KALEFYKKALEIDPTYVNAYNNIG--LIFYNQRKLDDALEYYD 883

Query: 293  TALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPH-------EFIF-- 343
             AL +    P    + YN    Y  K   E A L Y  ++ EIN  +       E I   
Sbjct: 884  KALQIN---PNYFQAQYNSGLVYELKFQNELAILCYTRAL-EINPNYTNAQIRLENILLK 939

Query: 344  -----------------------PYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLK 380
                                    YY LG V     +   A++   K +EI P+  E   
Sbjct: 940  DGIKQEELEVLKKKAEENTNNPEDYYKLGYVYYTNFNMDEAISCLNKAIEINPNYSEAYD 999

Query: 381  ALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSD-TGAALDAFKTARTL- 438
             LG IY +    EKA E  +KA +ID +   A   LG + +    T  A+  +  A  L 
Sbjct: 1000 KLGLIYEEKKMDEKAIEYYKKAIEIDSKCFNAINGLGNIYLDQKLTAEAIKCYMAALELD 1059

Query: 439  --------------------------LKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQS 470
                                       KKA E  P  I   NN+G+I+  KG+ + A   
Sbjct: 1060 PKSVKTHYNLGISFEDERNYDQAVYHYKKAVELDPRYINAYNNLGLIYEMKGKLDDALTC 1119

Query: 471  FKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFN 530
            ++ AL   I    +++     ++  + + ++  D  + +R       +EL  N    L+N
Sbjct: 1120 YQKAL--EINPNYVNAHNNVGLVYYAQNKME--DALINYR-----KALELNPNYYQALYN 1170

Query: 531  LARLLEQIHDTVAASV-LYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVN 589
               + E  +  +  ++  Y+ ++     Y  AY+RL  I      +  +++     L+++
Sbjct: 1171 SGLIYETYYKQIDQAIAFYKRVIELSPKYFSAYIRLGNIYLDSKMMDEALDCYQRILEID 1230

Query: 590  GKYPNALSMLG---------DLELK--------NDDWVKAKET----FRAASDATDGKDS 628
              Y +A++ LG         D  LK        N  + KA       +   +   D  + 
Sbjct: 1231 PNYIDAINNLGIVYEEKEMLDEALKCYRRAIELNPKYTKAYYNMGIIYEDQNKFDDAINC 1290

Query: 629  YATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEK 688
            Y T+   +  Y  A+ N      L+  + ++A   Y + +  + + LYA    G+V +EK
Sbjct: 1291 YKTIIELDPKYINAI-NRLGNIYLDLQNDDEALACYQKALEINPNYLYAFYNLGLVYSEK 1349

Query: 689  GQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLR 742
             +   +   + +V      S+  +  D +INL  ++  +     A+  Y+  L+
Sbjct: 1350 KKIGKAIQCYQKVI-----SIDPKYIDGYINLGVIFDEKKQMNKALTQYKKALK 1398



 Score = 79.3 bits (194), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 146/633 (23%), Positives = 270/633 (42%), Gaps = 50/633 (7%)

Query: 113  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
            A + Y KA  +     S  +    +     + ++    FK +LE   D+V        + 
Sbjct: 572  AIEKYEKAIELSPKYISALIRLADIYADSQQYQRGIECFKRILEITPDSVYDNYRLGYIY 631

Query: 173  FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 232
            +    + +++ +YK+AL+++P+   AI   +GL  Y      +A + +++A+++D    +
Sbjct: 632  YCLKNFDEAMYYYKKALEINPNYINAIN-NVGLVYYNQKNYEEALKCYEKAIEIDKNYFQ 690

Query: 233  ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTE 292
            A     ++  +A +   I + ++  ++  EI P      NY +     +G  +L + +T+
Sbjct: 691  AHYNSGIL-YEAKKM--IDEALDCYKKVMEINP------NYFS-ALIRSGNIYLDKYMTD 740

Query: 293  TAL----AVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGL 348
             AL     +    P    +  NL   Y  K  +++A   Y+ ++ +IN P+ ++  +Y L
Sbjct: 741  NALECFKKILEIDPNYIDAINNLGIVYEDKQMFDEAIDCYIKAI-QIN-PN-YVKAHYNL 797

Query: 349  GQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPR 408
            G +      F  AL  F KV+EI P         G+IY+     EKA E  +KA +IDP 
Sbjct: 798  GVLYENKFKFDDALACFLKVIEIDPKYMSAYNRAGNIYLDRQMNEKALEFYKKALEIDPT 857

Query: 409  DAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAH 468
               A+ ++G  LI  +     DA +     L+        +   N G+++  K + E A 
Sbjct: 858  YVNAYNNIG--LIFYNQRKLDDALEYYDKALQINPNYFQAQY--NSGLVYELKFQNELAI 913

Query: 469  QSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVL 528
              +  AL   I     +++ +   I     + Q +   L  + E + N+ E  +    V 
Sbjct: 914  LCYTRAL--EINPNYTNAQIRLENILLKDGIKQEELEVLKKKAEENTNNPEDYYKLGYVY 971

Query: 529  FNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKV 588
            +    + E      A S L + I     +Y +AY +L  I + +   + +IE   +A+++
Sbjct: 972  YTNFNMDE------AISCLNKAIEIN-PNYSEAYDKLGLIYEEKKMDEKAIEYYKKAIEI 1024

Query: 589  NGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRNEKR 648
            + K  NA++ LG++ L      +A + + AA +  D K      +LG    F   RN  +
Sbjct: 1025 DSKCFNAINGLGNIYLDQKLTAEAIKCYMAALE-LDPKSVKTHYNLGIS--FEDERNYDQ 1081

Query: 649  APKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGS 708
            A      H +KA EL  R I        A N  G++   KG+ D +   + +  E     
Sbjct: 1082 A----VYHYKKAVELDPRYIN-------AYNNLGLIYEMKGKLDDALTCYQKALEINPNY 1130

Query: 709  VFVQMPDVWINLAHVYFAQGNFALAMKMYQNCL 741
            V     +   N+  VY+AQ     A+  Y+  L
Sbjct: 1131 V-----NAHNNVGLVYYAQNKMEDALINYRKAL 1158



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 82/374 (21%), Positives = 158/374 (42%), Gaps = 53/374 (14%)

Query: 105  EKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPA 164
            E E ++  A  +Y KA  +D    + +   G +   KG+++ A + ++  LE + + V A
Sbjct: 1074 EDERNYDQAVYHYKKAVELDPRYINAYNNLGLIYEMKGKLDDALTCYQKALEINPNYVNA 1133

Query: 165  LLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRAL 224
                  V + + +  D+L  Y++AL+++P+   A+     +      Q+ +A   ++R +
Sbjct: 1134 HNNVGLVYYAQNKMEDALINYRKALELNPNYYQALYNSGLIYETYYKQIDQAIAFYKRVI 1193

Query: 225  QLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQH 284
            +L P+   A + L  + L   ++  + + ++  QR  EI P    A+N L     +  + 
Sbjct: 1194 ELSPKYFSAYIRLGNIYL---DSKMMDEALDCYQRILEIDPNYIDAINNLG--IVYEEKE 1248

Query: 285  FLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFP 344
             L E L     A+    P  + +YYN+   Y  +                          
Sbjct: 1249 MLDEALKCYRRAIE-LNPKYTKAYYNMGIIYEDQNK------------------------ 1283

Query: 345  YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAK 404
                         F  A+  ++ ++E+ P     +  LG+IY+ L   ++A    +KA +
Sbjct: 1284 -------------FDDAINCYKTIIELDPKYINAINRLGNIYLDLQNDDEALACYQKALE 1330

Query: 405  IDPRDAQAFIDLGELLISSD---TGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEK 461
            I+P    AF +LG  L+ S+    G A+  ++   ++  K      I+   N+GVI  EK
Sbjct: 1331 INPNYLYAFYNLG--LVYSEKKKIGKAIQCYQKVISIDPKY-----IDGYINLGVIFDEK 1383

Query: 462  GEFESAHQSFKDAL 475
             +   A   +K AL
Sbjct: 1384 KQMNKALTQYKKAL 1397


>gi|72386981|ref|XP_843915.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
           GUTat10.1]
 gi|62176396|gb|AAX70505.1| hypothetical protein, conserved [Trypanosoma brucei]
 gi|70800447|gb|AAZ10356.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
          Length = 901

 Score =  102 bits (255), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 186/812 (22%), Positives = 324/812 (39%), Gaps = 92/812 (11%)

Query: 116 YYNKASRIDMHEPSTWVGKGQLLLAKG-EVEQASSAFKIVLEADRDNVPALLGQACVEFN 174
           Y   AS   +  P     +G   +  G  ++ AS  F+  L  D+  + A +G A V F 
Sbjct: 69  YMADASASPLSRPVLLYLEGVAAMTSGTSLQTASMKFEEALRVDKHFILARMGLAAVCFY 128

Query: 175 RGRYSDSLEFYKRALQ-VHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEA 233
              Y  S   Y+  L+ V  S PG +R+G+GLC Y+LG++  A +  +RAL ++ E+V A
Sbjct: 129 MKDYKRSFSHYRAVLETVGSSAPGIVRVGLGLCAYRLGRMDAAVKWLERALAVNGEDVAA 188

Query: 234 LVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTET 293
           L++L V+ L       I++ ++ ++R  +++P  AM L    +  +F             
Sbjct: 189 LLSLLVVYLAQRR---IKEVIDVVRRLQKVFPDNAMILLKTTDILYFRA----------- 234

Query: 294 ALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQL 353
                + G  K+     LA S           L+ ++  +   +  +     Y  G++ L
Sbjct: 235 ----VSQGRVKA-----LAPSI----------LHLLSEARPTARVEDAAIADYQEGRLLL 275

Query: 354 KLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAF 413
            LGDF  A    E  +++ P+          +   LG+  +A++LL +     P   +  
Sbjct: 276 ALGDFTRARVLLESSMQVLPNCLAARVHYARLLFLLGRDVEAEQLLLRINAEHPNQKEVL 335

Query: 414 IDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFK- 472
             L     +S  G    A + ++ L +      P +VL+        +   E + +    
Sbjct: 336 QMLAAH--ASHLGLHERALECSKLLTESVA---PGDVLSWTLAAWCSRLNSEESAKLLTH 390

Query: 473 -----DALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTV 527
                + LG  + + L     K  +     ++    + +L   F +     ELP N V +
Sbjct: 391 VLHIYEELGTPVPMKL--RANKASMCGDIGTLQNILESELGEDFLSKP---ELPVNYVPI 445

Query: 528 LFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALK 587
           ++N+ARLLE   D V A  LY  ++  +  +   Y RL  +AKA    + +I  +N   +
Sbjct: 446 VYNMARLLE-TSDKVRACELYSYLVKHHPCFSYPYFRLYELAKAERCWRKAIMWMNLLRQ 504

Query: 588 VNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRNEK 647
                P AL  +  L  +   +  A    R A      +     L+LG       LR+ +
Sbjct: 505 AIPDEPRALVYICLLFFEQRRYAAAMNILRLAKT----RSCVVALALGQ----IYLRHAQ 556

Query: 648 RAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASG 707
           +        LE AK+ +   + +   N+ AA+G    L  +G+ +    L  +V E    
Sbjct: 557 QHSGDSYRFLELAKDRFHFALQKDKGNVLAAHGMACCLGLEGRHESCLLLLDRVGEIVPN 616

Query: 708 SVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQ 767
             +V+      ++A+      +F  A+   Q   ++    + +     LA   +   ++ 
Sbjct: 617 CSYVR-KHYEAHMANAKILSDSFKQAIDYLQRDPQRAPLQSSS-----LAFCLFCEGRYA 670

Query: 768 DCKKSLLRAIHLAPSNYTLRFD-AGVAMQKFSASTLQKTRRT---ADEVRSTVAELENAV 823
           D      +A+   PS   LRF+ A +    F AS  QK  ++   A E+RS + E  N  
Sbjct: 671 DAIAVQKKAVDELPSEPLLRFNLALLYCASFVASISQKQEQSVQEAKELRSFLTEGLNIA 730

Query: 824 RVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLD------AAKIHREAAEREEQQNRQRQ 877
             F  + + S        +K +     YC H  D       A  HR A E E Q      
Sbjct: 731 HEFIKIESESRRLSEA--KKLLKQLCAYCVHHNDLSIPKVVANGHRAALEAERQD----- 783

Query: 878 EAARQAALAEEARRKAEE-QKKYLLEKRKLED 908
                   AE  R   E  ++K +LE+R+L D
Sbjct: 784 --------AEWCRVYNEHLEQKRMLEERRLAD 807


>gi|440301520|gb|ELP93906.1| tpr repeat nuclear phosphoprotein/ctr9, putative [Entamoeba
           invadens IP1]
          Length = 1005

 Score = 99.4 bits (246), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 144/632 (22%), Positives = 259/632 (40%), Gaps = 78/632 (12%)

Query: 151 FKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 210
           FK  LE D +  PA++G A +E   G    +L +YK+A+   P+ P +IR G     Y  
Sbjct: 142 FKRALEIDPNCTPAIVGLALLETKLGNERTALSYYKQAVSQQPTNP-SIRCGAARIFYLQ 200

Query: 211 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 270
               ++ + F+ AL LD   ++ALV+L+ +         +++ +   +RA  +       
Sbjct: 201 RAFKQSIKCFESALVLDKTCLDALVSLSRIYWNLRTPEAVKRALLFAERALAVDRNNVDV 260

Query: 271 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 330
           L  L+    F+  +   E+     + + N    K++ ++ L R  H +  +E A   Y+ 
Sbjct: 261 LYVLSEAAMFSKNYKKAEEFCTRIVELGNTA-DKAYGHFTLGRVKHFEKKFEDAMKEYLE 319

Query: 331 SVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLG 390
           + K ++K        + + Q++ K  +++        V++   D+ + LK LG+  ++L 
Sbjct: 320 AEK-MDKDESMPQIRFRIAQLEFKKKEYKKVEDRLLIVVKKISDDFDVLKLLGYSQLKLN 378

Query: 391 QIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEV 450
           +   A   L KA+ I   D +  I L  LL  S+   A        ++  +  E    E 
Sbjct: 379 KKSDAIANLSKASLIKT-DEKVEITLAMLLEESEPRHA--------SMHYEKIENKNEEA 429

Query: 451 LNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHR 510
           LNNIG  ++   E+E+A + F+ A   G                ASA             
Sbjct: 430 LNNIGCCYYFMKEYETALKWFEKAESTG---------------KASA------------- 461

Query: 511 FENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAK 570
                          T LFN +R +E +     A   YR +L     Y D ++R++    
Sbjct: 462 ---------------TTLFNKSRCIEALGRWDEAEKEYRKVLVTTPWYFDCHIRISYHYW 506

Query: 571 ARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDS-- 628
                 L+   + EA+K   K  +A  +LG   +K + W K +E  +          S  
Sbjct: 507 DLGRYDLASHELVEAIKSYPKCEDAKVLLG--VMKTEKW-KLEEAMKLFESVIQENRSNL 563

Query: 629 YATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAE- 687
           YA L + N  Y+   +N + A K       +A ELY +++    +N+ A NG  + L + 
Sbjct: 564 YAFLGMANV-YYKFGKNNENAKK-------RAVELYMKILKHDVTNIQALNGLAMCLVDI 615

Query: 688 -KGQFDVSKDLFTQVQEAASGSVFVQMPD--VWINLAHVYFAQGNFALAMKMYQNCLRKF 744
               +    DL  ++    +     + P+  V  +L  + F  GN+  A   +    +  
Sbjct: 616 KVDNYVPPIDLICKILAKTNE----EQPNKKVAFSLGTLQFYLGNYPTAEATFTYICKT- 670

Query: 745 YYNTDAQILLYLARTHYEAEQWQDCKKSLLRA 776
            Y  D  +L  +A   + + +++   KSL RA
Sbjct: 671 -YGDDPTVLNSIAECQFVSGKFEQALKSLERA 701


>gi|118376183|ref|XP_001021274.1| SLEI family protein [Tetrahymena thermophila]
 gi|89303041|gb|EAS01029.1| SLEI family protein [Tetrahymena thermophila SB210]
          Length = 2889

 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 90/330 (27%), Positives = 160/330 (48%), Gaps = 14/330 (4%)

Query: 146 QASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGL 205
           +A   +K  +E D +   A    A +  N+  + DS + Y+RA+++ P    A    IGL
Sbjct: 231 EAIKYYKKAIEIDPNYYNAQFNLALIYQNQNNFDDSFQCYRRAIEIDPKQVDAYN-NIGL 289

Query: 206 CRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYP 265
             Y  G + +A +++++AL++DP+  +A    A   L   +   I + ++  ++  EI P
Sbjct: 290 IYYYKGMIKEALESYKKALEIDPKYYKAYHNSA---LAYEKEKLIDEAIQCYKKTIEINP 346

Query: 266 YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAG 325
               +L  L +       + L+++  E    +    P     +Y+LA  Y+ K    +A 
Sbjct: 347 SFLKSLTRLGD---ICIDNNLLDEGIECFKKIIQLDPQSYFDHYSLADLYYKKNMLVEAI 403

Query: 326 LYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 385
            +Y  ++ EIN P +     Y LG    K G+   AL  ++K +++ P++ E     G  
Sbjct: 404 NHYKITL-EIN-PQQLSAHLY-LGISYKKQGNLEEALQCYKKAIQLNPNSQEAHFNSGIA 460

Query: 386 YVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEE 445
           Y  LG +++A E  +KA +I+P+   A I+LG L   ++     DA K  +TLL    EE
Sbjct: 461 YSHLGNVKEALECYKKALEINPKFVSALINLGALY--TNQKIYEDAIKCYQTLL--TIEE 516

Query: 446 VPIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
             ++ LNN+G I+ +K  F+ A   FK  +
Sbjct: 517 NNLDGLNNLGYIYSQKNMFDEAINYFKKVI 546



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 144/623 (23%), Positives = 264/623 (42%), Gaps = 117/623 (18%)

Query: 121 SRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSD 180
           ++IDM +      +G     +  +++A   FK VLE D +N  AL   A    ++    +
Sbjct: 2   NQIDMVDSQVLFKQGIDFQKQNMLDEAVECFKKVLEIDANNTEALYNLALTYQSKKLIDE 61

Query: 181 SLEFYKRALQVHPSCPGAI--RLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA 238
           SL +  + L ++PS   A   + GI L   +   L  A    ++ L++DP N  A   L 
Sbjct: 62  SLVYLNKVLDLNPSHVNAYISKAGIYL---EQKILDFAISCLKKVLEIDPYNANAHERLG 118

Query: 239 VMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVT 298
                 N    I + ++  ++A EI P C  A + L     + G+  L++Q  +  L   
Sbjct: 119 FTYKAQN---LIDQAIKCYKKAIEIDPNCTEAYHNLG--IVYEGKG-LIQQAYQCYLKAQ 172

Query: 299 NHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDF 358
           +  P  + SY +LAR+Y+                                  +  ++ D 
Sbjct: 173 SIDPKYTKSYISLARNYY----------------------------------LDFQIQD- 197

Query: 359 RSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGE 418
             A+ + +K +EI P++ E  + LG +Y       +A +  +KA +IDP    A  +L  
Sbjct: 198 --AIKSLKKAIEIEPNSVEAYERLGFVYQNEKNNSEAIKYYKKAIEIDPNYYNAQFNLA- 254

Query: 419 LLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALG-D 477
            LI  +     D+F+  R  ++   ++V  +  NNIG+I++ KG  + A +S+K AL  D
Sbjct: 255 -LIYQNQNNFDDSFQCYRRAIEIDPKQV--DAYNNIGLIYYYKGMIKEALESYKKALEID 311

Query: 478 GIWL-------------TLLDSKTKTY--VIDASASMLQ----FKDMQLFHRFENDGNHV 518
             +               L+D   + Y   I+ + S L+      D+ + +   ++G  +
Sbjct: 312 PKYYKAYHNSALAYEKEKLIDEAIQCYKKTIEINPSFLKSLTRLGDICIDNNLLDEG--I 369

Query: 519 ELPWNKVTVL--------FNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAK 570
           E  + K+  L        ++LA L  + +  V A   Y++ L      + A+L L    K
Sbjct: 370 EC-FKKIIQLDPQSYFDHYSLADLYYKKNMLVEAINHYKITLEINPQQLSAHLYLGISYK 428

Query: 571 ARNNLQLSIELVNEALKVNGKYPN----------ALSMLGDLELKNDDWVKAKETFRAAS 620
            + NL+ +++   +A+++N   PN          A S LG+++       +A E ++ A 
Sbjct: 429 KQGNLEEALQCYKKAIQLN---PNSQEAHFNSGIAYSHLGNVK-------EALECYKKAL 478

Query: 621 DATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANG 680
           +  + K   A ++LG     A   N+K          E A + Y  ++    +NL   N 
Sbjct: 479 E-INPKFVSALINLG-----ALYTNQKI--------YEDAIKCYQTLLTIEENNLDGLNN 524

Query: 681 AGVVLAEKGQFDVSKDLFTQVQE 703
            G + ++K  FD + + F +V E
Sbjct: 525 LGYIYSQKNMFDEAINYFKKVIE 547



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 143/660 (21%), Positives = 279/660 (42%), Gaps = 113/660 (17%)

Query: 135 GQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS 194
             L   K  + +A + +KI LE +   + A L        +G   ++L+ YK+A+Q++P+
Sbjct: 390 ADLYYKKNMLVEAINHYKITLEINPQQLSAHLYLGISYKKQGNLEEALQCYKKAIQLNPN 449

Query: 195 CPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGM 254
              A     G+    LG + +A + +++AL+++P+ V AL+ L    L  N+       +
Sbjct: 450 SQEA-HFNSGIAYSHLGNVKEALECYKKALEINPKFVSALINLGA--LYTNQKI-YEDAI 505

Query: 255 EKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARS 314
           +  Q    I       LN L    +   Q  + ++       V    PT   SYYN+  +
Sbjct: 506 KCYQTLLTIEENNLDGLNNLG---YIYSQKNMFDEAINYFKKVIEIDPTYYLSYYNIGVA 562

Query: 315 YHSKGDYEKAGLYYMASVKEINKPHEFIF-----------------------------PY 345
           Y SK   ++A  YY   V+E++  +  +F                               
Sbjct: 563 YESKQMLDEALEYY-NKVEEMSPKYFIVFVRQGNVYSQKNMQNEAFQCYNKVSEQILKNI 621

Query: 346 YGLGQ-VQLKLGDF-RSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAA 403
           Y L + +++    F + ++ N+E  +++ P   +   +LG ++  + Q+E+A    + A 
Sbjct: 622 YSLSEELEISRASFVQESIKNYEDAVKLNPKYIQFYHSLGLLHSNINQMEEAMRYFQAAI 681

Query: 404 KIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGE--EVPIEVLNNIGVIHFEK 461
           ++DP+   ++++LG +     +G A+  +  A+  L+KA E  +     LNN G+ +F +
Sbjct: 682 ELDPKYINSYLELGNIY----SGKAI--YDKAQQCLEKALEIDQNSASALNNFGLFYFTQ 735

Query: 462 GEFESAHQSFKDAL-----------GDGIWL---TLLDSKTKTY----VIDASASMLQFK 503
              + A +SFK AL             G+      L+D   + Y    +I+ +      K
Sbjct: 736 KMDDKALESFKKALEINPNYELAIYNSGLVYESKNLIDKALECYKNVLLINPTDKKALSK 795

Query: 504 DMQLFHRFENDG-NHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAY 562
             QL  +   DG N+V           NL  +L+  +  + ++  +      YQ     Y
Sbjct: 796 IDQLNQK---DGKNNV-----------NLEEILQDANKNLKSAKDF------YQQGFVYY 835

Query: 563 LRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDA 622
           ++    AK+   L+ +IEL       + KY +A   LG L  +     +A E+++ A + 
Sbjct: 836 IQRKD-AKSIECLKKAIEL-------DPKYFDAYDKLGLLYKEKKMISQAIESYKKAFEI 887

Query: 623 TDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAG 682
                S   + +G       L  EK+        +++AK+ + +VI  + ++  A    G
Sbjct: 888 NPKYYSAIGIIMG-------LYKEKKM-------MDEAKQFHKKVIEDNQNSTQALAQIG 933

Query: 683 VVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLR 742
               E   FD + D + ++ E    +V     DV+I + ++Y  +     A++ ++N L+
Sbjct: 934 EAYQENKMFDEAIDCYQKITELEPFNV-----DVYIEIGNIYLDKQMNDQALECFENVLQ 988



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 80/369 (21%), Positives = 162/369 (43%), Gaps = 28/369 (7%)

Query: 113  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
            A   Y KA   D    S ++  G   L K + +QA   +K  LE D ++V A      + 
Sbjct: 2012 AISNYQKAIEQDPKYKSAYIQLGNSYLDKVQYDQAIECYKKALEIDPNDVIAYNNIGLIY 2071

Query: 173  FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 232
            +N+ +   +LE+Y +A++++P     I    GL   K+    KA + + + L+++P   +
Sbjct: 2072 YNQEKIDLALEYYNKAIEINPKYELPI-YNSGLIYEKMKLKEKALECYNKVLEINPTEQK 2130

Query: 233  ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTG-QHFLVEQLT 291
            +L    +++ +  +        ++     E+        N  A  FF  G  H++  +  
Sbjct: 2131 SLKRKKILEDKTQK--------DEFNLLNELNKNIIQNSNSKAEEFFQKGFLHYIQGKDD 2182

Query: 292  ETALAVTNH---GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGL 348
            E+   +       P    +Y  L   Y SK  +++A   Y  +++   K  E I      
Sbjct: 2183 ESIQCLQQAIEIDPNFYEAYGKLGFIYQSKKMFDEAIENYKKAIQLSPKSLESI------ 2236

Query: 349  GQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPR 408
             +  +++   R+ L   ++     P N ET   +G+++     I++A +  +K  +++P+
Sbjct: 2237 -RNIVEIYHNRNMLNEVKEFFNSIPKNTETYYNIGNVFADKYMIDEAIDYYQKTIQLNPQ 2295

Query: 409  DAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVL--NNIGVIHFEKGEFES 466
               A+I+LG   ++         ++ A     K  E  P + +  NNIG++HF++ +++ 
Sbjct: 2296 HINAYIELGNTYLNKIQ------YEKALECYNKIVEINPKQAVAYNNIGLVHFKQNKYDE 2349

Query: 467  AHQSFKDAL 475
            A Q +  AL
Sbjct: 2350 AIQFYNKAL 2358



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 71/322 (22%), Positives = 148/322 (45%), Gaps = 17/322 (5%)

Query: 116 YYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNR 175
           Y NK   ++    + ++ K  + L +  ++ A S  K VLE D  N  A          +
Sbjct: 65  YLNKVLDLNPSHVNAYISKAGIYLEQKILDFAISCLKKVLEIDPYNANAHERLGFTYKAQ 124

Query: 176 GRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV 235
                +++ YK+A+++ P+C  A    +G+     G + +A Q + +A  +DP+  ++ +
Sbjct: 125 NLIDQAIKCYKKAIEIDPNCTEAYH-NLGIVYEGKGLIQQAYQCYLKAQSIDPKYTKSYI 183

Query: 236 ALA---VMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTE 292
           +LA    +D Q      I+  ++ +++A EI P    A   L   F +  +    E +  
Sbjct: 184 SLARNYYLDFQ------IQDAIKSLKKAIEIEPNSVEAYERLG--FVYQNEKNNSEAIKY 235

Query: 293 TALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQ 352
              A+    P   ++ +NLA  Y ++ +++ +   Y  ++ EI+ P + +  Y  +G + 
Sbjct: 236 YKKAIE-IDPNYYNAQFNLALIYQNQNNFDDSFQCYRRAI-EID-PKQ-VDAYNNIGLIY 291

Query: 353 LKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQA 412
              G  + AL +++K LEI P   +        Y +   I++A +  +K  +I+P   ++
Sbjct: 292 YYKGMIKEALESYKKALEIDPKYYKAYHNSALAYEKEKLIDEAIQCYKKTIEINPSFLKS 351

Query: 413 FIDLGELLISSD-TGAALDAFK 433
              LG++ I ++     ++ FK
Sbjct: 352 LTRLGDICIDNNLLDEGIECFK 373



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 75/323 (23%), Positives = 140/323 (43%), Gaps = 19/323 (5%)

Query: 117  YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 176
            ++KA  ++    + ++  G + L + + E+A   ++  +E D   V A      V +N  
Sbjct: 2557 FSKAIELNPKYANAYIKLGNIYLKQIKYEKARECYEKAIEIDPKQVVAYNNIGLVYYNLK 2616

Query: 177  RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVA 236
                +L +Y++ALQ++P    ++    GL      Q  KA + + +AL++DP +V+ L  
Sbjct: 2617 NDDLALSYYQKALQINPRYILSL-YNSGLAYEMKNQNQKALEFYNKALEVDPNDVKTLTR 2675

Query: 237  LAVMDLQANEAAGIRK-GMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETAL 295
            +  + L+     GI +  ++ +   F       + +   A  ++  G  +  +++ + ++
Sbjct: 2676 MTQLLLKT---GGIDEPDVDNLLSDF------GINVQKSAIDYYKQGYSYYTKKMKDQSI 2726

Query: 296  AVTNHG----PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQV 351
               N      P    +Y  LA  Y  K   +KA   Y    K I K   FI  Y  LG +
Sbjct: 2727 KCLNKAIEMDPNFFEAYDKLALIYEEKKMLDKAIENYR---KAIEKNPNFINGYNKLGNI 2783

Query: 352  QLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQ 411
             L+   F  A+  ++K LEI P+           Y +     +A    +KA  IDP    
Sbjct: 2784 YLEKKMFDDAIVCYQKCLEIDPNYYYGYYNQAIAYEEKQLDSQAIYCYKKAINIDPTGIN 2843

Query: 412  AFIDLGELLISSDTGA-ALDAFK 433
            A+I+LG +    +  + +L  FK
Sbjct: 2844 AYINLGMIYQDQEKASKSLSCFK 2866



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 97/426 (22%), Positives = 175/426 (41%), Gaps = 68/426 (15%)

Query: 80   YERIAILNA-LGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLL 138
            Y +I  +N    V Y  +G +  KQ + +E    A Q+YNKA  +D +   ++   G + 
Sbjct: 2320 YNKIVEINPKQAVAYNNIGLVHFKQNKYDE----AIQFYNKALEVDPNYDLSYYNSGLVY 2375

Query: 139  LAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGA 198
              K   ++A   +  VL+ + ++   L     +  N+ +  + +E   +A ++  S    
Sbjct: 2376 ETKKMNDKALECYNKVLKINPNDKKTLTRIQKINENKDKNLEEIEIDLKADKIPQSAKDY 2435

Query: 199  IRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEAL--VALAVMDLQANEAAGIRKGMEK 256
               G      K+  L  +    ++A++++P   EA   + L     Q  E A     ++ 
Sbjct: 2436 FIQGSTYFIKKIKDL--SIDCLKKAIEIEPNYSEAYDKLGLVYQYYQMYEDA-----IQN 2488

Query: 257  MQRAFEIYPYC------AMALNYLANHFFFTGQHF---LVEQ------------------ 289
             Q+AFE  P C       MA+ YL     F  + F   ++E+                  
Sbjct: 2489 FQKAFETNPKCYDAVLSLMAI-YLEKKTLFEAKEFHNQIIEKNPDVPELHHKIGVAYQEK 2547

Query: 290  -LTETALAVTNH----GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFP 344
             + + A+   +      P  +++Y  L   Y  +  YEKA   Y  ++ EI+ P + +  
Sbjct: 2548 SMFDEAITCFSKAIELNPKYANAYIKLGNIYLKQIKYEKARECYEKAI-EID-PKQVV-A 2604

Query: 345  YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAK 404
            Y  +G V   L +   AL+ ++K L+I P    +L   G  Y    Q +KA E   KA +
Sbjct: 2605 YNNIGLVYYNLKNDDLALSYYQKALQINPRYILSLYNSGLAYEMKNQNQKALEFYNKALE 2664

Query: 405  IDPRDAQAFIDLGELLIS-------------SDTG-----AALDAFKTARTLLKKAGEEV 446
            +DP D +    + +LL+              SD G     +A+D +K   +   K  ++ 
Sbjct: 2665 VDPNDVKTLTRMTQLLLKTGGIDEPDVDNLLSDFGINVQKSAIDYYKQGYSYYTKKMKDQ 2724

Query: 447  PIEVLN 452
             I+ LN
Sbjct: 2725 SIKCLN 2730



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 109/520 (20%), Positives = 220/520 (42%), Gaps = 34/520 (6%)

Query: 105 EKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPA 164
           + + +F  + Q Y +A  ID  +   +   G +   KG +++A  ++K  LE D     A
Sbjct: 258 QNQNNFDDSFQCYRRAIEIDPKQVDAYNNIGLIYYYKGMIKEALESYKKALEIDPKYYKA 317

Query: 165 LLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAI-RLGIGLCRYKLGQLGKARQAFQRA 223
               A          ++++ YK+ ++++PS   ++ RLG  +C      L +  + F++ 
Sbjct: 318 YHNSALAYEKEKLIDEAIQCYKKTIEINPSFLKSLTRLG-DIC-IDNNLLDEGIECFKKI 375

Query: 224 LQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQ 283
           +QLDP++     +LA +  + N    + + +   +   EI P    A  YL   +   G 
Sbjct: 376 IQLDPQSYFDHYSLADLYYKKN---MLVEAINHYKITLEINPQQLSAHLYLGISYKKQGN 432

Query: 284 HFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIF 343
              +E+  +         P    +++N   +Y   G+ ++A   Y  ++ EIN   +F+ 
Sbjct: 433 ---LEEALQCYKKAIQLNPNSQEAHFNSGIAYSHLGNVKEALECYKKAL-EINP--KFVS 486

Query: 344 PYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAA 403
               LG +      +  A+  ++ +L I  +N + L  LG+IY Q    ++A    +K  
Sbjct: 487 ALINLGALYTNQKIYEDAIKCYQTLLTIEENNLDGLNNLGYIYSQKNMFDEAINYFKKVI 546

Query: 404 KIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEK 461
           +IDP    ++ ++G   ++ ++   LD    A     K  E  P    V    G ++ +K
Sbjct: 547 EIDPTYYLSYYNIG---VAYESKQMLD---EALEYYNKVEEMSPKYFIVFVRQGNVYSQK 600

Query: 462 GEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELP 521
                A Q + + + + I   +     +  +  + AS +Q          +N  + V+L 
Sbjct: 601 NMQNEAFQCY-NKVSEQILKNIYSLSEELEI--SRASFVQ-------ESIKNYEDAVKLN 650

Query: 522 WNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIEL 581
              +    +L  L   I+    A   ++  +     Y+++YL L  I   +     + + 
Sbjct: 651 PKYIQFYHSLGLLHSNINQMEEAMRYFQAAIELDPKYINSYLELGNIYSGKAIYDKAQQC 710

Query: 582 VNEALKVNGKYPNALSMLGDLEL--KNDDWVKAKETFRAA 619
           + +AL+++    +AL+  G      K DD  KA E+F+ A
Sbjct: 711 LEKALEIDQNSASALNNFGLFYFTQKMDD--KALESFKKA 748



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 83/368 (22%), Positives = 154/368 (41%), Gaps = 35/368 (9%)

Query: 113  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
            A   Y K + ++      ++  G + L K   +QA   F+ VL+ +   + A      V 
Sbjct: 945  AIDCYQKITELEPFNVDVYIEIGNIYLDKQMNDQALECFENVLQINPQEIIAHNNIGLVY 1004

Query: 173  FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 232
            + +  +  +LE Y  AL ++P    +I    GL      Q+ KA + + R LQL+P+   
Sbjct: 1005 YEKKMFDKALEHYNNALLINPDFQQSI-YNSGLAYESKNQIDKALECYNRVLQLNPDEER 1063

Query: 233  ALVALAVMDLQANEAAGIRKGME-KMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLT 291
            +L  +  + LQ        K +E K+ +A    P  A    Y   + +F  Q    EQ  
Sbjct: 1064 SLTRIKKISLQ-------NKILEKKIDKA----PSTAKEF-YQQGYLYF--QQLKDEQSI 1109

Query: 292  ETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQV 351
            +         P    +Y  L   Y  +  + +A L Y  ++ EIN P+        L  +
Sbjct: 1110 QCLKKAIELDPNYFEAYDKLGLVYKERKMFNEAVLNYKKAI-EIN-PN-------CLNAI 1160

Query: 352  QLKLGDF--RSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRD 409
            +  +  +  R  L   ++  +  P N +T   L  +Y     ++++  + ++  +++ + 
Sbjct: 1161 KEVMNIYLDRKMLNEAKEFYDQVPKNLDTYYELAVVYQTQKMLDESIAIYKRIIELNSKY 1220

Query: 410  AQAFIDLGE-LLISSDTGAALDAF-KTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESA 467
             +A+I LG   L       AL+++ K      KKA         NNIG+++F +G  + A
Sbjct: 1221 IKAYIQLGNAYLDKPQYDLALESYQKIIEIDPKKAV------AYNNIGLVYFRQGMNDEA 1274

Query: 468  HQSFKDAL 475
             + F  A+
Sbjct: 1275 LEYFTKAI 1282



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 126/686 (18%), Positives = 277/686 (40%), Gaps = 94/686 (13%)

Query: 79   RYERIAILNALGV-YYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQL 137
             YE    LN   + +Y  LG + +   + EE    A +Y+  A  +D    ++++  G +
Sbjct: 642  NYEDAVKLNPKYIQFYHSLGLLHSNINQMEE----AMRYFQAAIELDPKYINSYLELGNI 697

Query: 138  LLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPG 197
               K   ++A    +  LE D+++  AL       F +     +LE +K+AL+++P+   
Sbjct: 698  YSGKAIYDKAQQCLEKALEIDQNSASALNNFGLFYFTQKMDDKALESFKKALEINPNYEL 757

Query: 198  AIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQ-ANEAAGIRKGMEK 256
            AI    GL       + KA + ++  L ++P + +AL  +  ++ +       + + ++ 
Sbjct: 758  AI-YNSGLVYESKNLIDKALECYKNVLLINPTDKKALSKIDQLNQKDGKNNVNLEEILQD 816

Query: 257  MQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYH 316
              +  +            A  F+  G  + +++    ++            Y++      
Sbjct: 817  ANKNLK-----------SAKDFYQQGFVYYIQRKDAKSIECLKKAIELDPKYFDA----- 860

Query: 317  SKGDYEKAGLYY----MAS--VKEINKPHEFIFPYYGLGQVQLKLGDFRSALTN----FE 366
                Y+K GL Y    M S  ++   K  E    YY    + + L   +  +       +
Sbjct: 861  ----YDKLGLLYKEKKMISQAIESYKKAFEINPKYYSAIGIIMGLYKEKKMMDEAKQFHK 916

Query: 367  KVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTG 426
            KV+E   ++ + L  +G  Y +    ++A +  +K  +++P +   +I++G + +     
Sbjct: 917  KVIEDNQNSTQALAQIGEAYQENKMFDEAIDCYQKITELEPFNVDVYIEIGNIYLDKQMN 976

Query: 427  -AALDAFKTARTLLKKAGEEVPIEVL--NNIGVIHFEKGEFESAHQSFKDAL------GD 477
              AL+ F+    +        P E++  NNIG++++EK  F+ A + + +AL        
Sbjct: 977  DQALECFENVLQI-------NPQEIIAHNNIGLVYYEKKMFDKALEHYNNALLINPDFQQ 1029

Query: 478  GIWLTLLDSKTKTYV--------------IDASASMLQFKDMQLFHRFENDGNHVELPWN 523
             I+ + L  ++K  +               D   S+ + K + L ++       ++   +
Sbjct: 1030 SIYNSGLAYESKNQIDKALECYNRVLQLNPDEERSLTRIKKISLQNKILE--KKIDKAPS 1087

Query: 524  KVTVLFNLARL-LEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELV 582
                 +    L  +Q+ D  +   L + I     +Y +AY +L  + K R     ++   
Sbjct: 1088 TAKEFYQQGYLYFQQLKDEQSIQCLKKAIELD-PNYFEAYDKLGLVYKERKMFNEAVLNY 1146

Query: 583  NEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAA 642
             +A+++N    NA+  + ++ L      +AKE +          D+Y  L++        
Sbjct: 1147 KKAIEINPNCLNAIKEVMNIYLDRKMLNEAKEFY---DQVPKNLDTYYELAV-------V 1196

Query: 643  LRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQ 702
             + +K         L+++  +Y R+I  ++  + A    G    +K Q+D++ + + ++ 
Sbjct: 1197 YQTQKM--------LDESIAIYKRIIELNSKYIKAYIQLGNAYLDKPQYDLALESYQKII 1248

Query: 703  EAASGSVFVQMPDVWINLAHVYFAQG 728
            E             + N+  VYF QG
Sbjct: 1249 EIDPKKAV-----AYNNIGLVYFRQG 1269



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 66/337 (19%), Positives = 142/337 (42%), Gaps = 39/337 (11%)

Query: 113  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
            A + Y KA  ++    + ++  G   L K   ++A  ++K ++E D     A      V 
Sbjct: 1470 AVESYLKAIELNPKYINAFIQLGNAYLDKLLFDKAIESYKKIIEIDPSKAIAYNNIGLVY 1529

Query: 173  FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 232
            F +     +LE +++A++++P    ++    GL   +  Q  KA + +++ L+++P   +
Sbjct: 1530 FEQEMNDLALEQFQKAIEINPKYELSL-YNSGLVYERKDQNDKALECYRKVLEINPNEQK 1588

Query: 233  ALVALAVMDLQANEAAGIRKGMEK-MQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLT 291
            +L  + ++  + N+    +  + K +Q+               A  +F  G  + +EQ  
Sbjct: 1589 SLSRIQIIKQKQNKTLNEKFDLLKVLQKKL------GKEFTSKAEEYFKQGFLYFMEQKY 1642

Query: 292  ETALAVTNH----GPTKSHSYYNLARSYHSKGDYEKAGLYYMASV--------------- 332
            + ++          P    +Y  L   Y  K  +E+A +YY  ++               
Sbjct: 1643 DMSIECLKKAIEINPNYCDAYERLGFIYEQKKMFEEAVIYYKKALQINPKLLKVIKIVMD 1702

Query: 333  -----KEINKPHEFIFP-------YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLK 380
                 K +N+  +F          YY L Q+         ++ N++KVLE+   + +   
Sbjct: 1703 IYLNKKMVNEAKDFYDSIAKNSDTYYELAQIYQNQNMLDESINNYQKVLELNNKDIDAYV 1762

Query: 381  ALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 417
            +LG +Y+     EKA E  +K  +I+ ++  A+ ++G
Sbjct: 1763 SLGSVYLNKLYYEKALECYQKILEINSKEPVAYNNIG 1799



 Score = 56.2 bits (134), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 126/607 (20%), Positives = 241/607 (39%), Gaps = 105/607 (17%)

Query: 97   GKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQL--LLAKGEVEQASSAFKIV 154
            G I  K + KE+    A + YNK   I+  E  +   K  L     K E    +   K +
Sbjct: 2102 GLIYEKMKLKEK----ALECYNKVLEINPTEQKSLKRKKILEDKTQKDEFNLLNELNKNI 2157

Query: 155  LEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAI-RLGIGLCRYKLGQL 213
            ++           +  + + +G+  +S++  ++A+++ P+   A  +LG      K+   
Sbjct: 2158 IQNSNSKAEEFFQKGFLHYIQGKDDESIQCLQQAIEIDPNFYEAYGKLGFIYQSKKM--F 2215

Query: 214  GKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNY 273
             +A + +++A+QL P+++E++  +        E    R  + +++  F   P        
Sbjct: 2216 DEAIENYKKAIQLSPKSLESIRNIV-------EIYHNRNMLNEVKEFFNSIPKNTETYYN 2268

Query: 274  LANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK 333
            + N F      +++++  +         P   ++Y  L  +Y +K  YEKA   Y   V 
Sbjct: 2269 IGNVF---ADKYMIDEAIDYYQKTIQLNPQHINAYIELGNTYLNKIQYEKALECYNKIV- 2324

Query: 334  EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIE 393
            EIN P + +  Y  +G V  K   +  A+  + K LE+ P+   +    G +Y      +
Sbjct: 2325 EIN-PKQAV-AYNNIGLVHFKQNKYDEAIQFYNKALEVDPNYDLSYYNSGLVYETKKMND 2382

Query: 394  KAQELLRKAAKIDPRDAQAFIDLGELLISSDTG---------------AALDAFKTART- 437
            KA E   K  KI+P D +    + ++  + D                 +A D F    T 
Sbjct: 2383 KALECYNKVLKINPNDKKTLTRIQKINENKDKNLEEIEIDLKADKIPQSAKDYFIQGSTY 2442

Query: 438  -----------LLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLL 484
                        LKKA E  P   E  + +G+++     +E A Q+F+ A          
Sbjct: 2443 FIKKIKDLSIDCLKKAIEIEPNYSEAYDKLGLVYQYYQMYEDAIQNFQKA---------F 2493

Query: 485  DSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAA 544
            ++  K Y  DA  S++                          +      L E       A
Sbjct: 2494 ETNPKCY--DAVLSLM-------------------------AIYLEKKTLFE-------A 2519

Query: 545  SVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLEL 604
               +  I+ K  D  + + ++    + ++    +I   ++A+++N KY NA   LG++ L
Sbjct: 2520 KEFHNQIIEKNPDVPELHHKIGVAYQEKSMFDEAITCFSKAIELNPKYANAYIKLGNIYL 2579

Query: 605  KNDDWVKAKETFRAASDATDGKD--SYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKE 662
            K   + KA+E +  A +  D K   +Y  + L  +N    L+N+     L  ++ +KA +
Sbjct: 2580 KQIKYEKARECYEKAIE-IDPKQVVAYNNIGLVYYN----LKND----DLALSYYQKALQ 2630

Query: 663  LYTRVIV 669
            +  R I+
Sbjct: 2631 INPRYIL 2637



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 82/375 (21%), Positives = 162/375 (43%), Gaps = 74/375 (19%)

Query: 144  VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGI 203
            ++++ + +K ++E +   + A +       ++ +Y  +LE Y++ +++ P    A    I
Sbjct: 1203 LDESIAIYKRIIELNSKYIKAYIQLGNAYLDKPQYDLALESYQKIIEIDPKKAVAYN-NI 1261

Query: 204  GLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEI 263
            GL  ++ G   +A + F +A++++ +           DL    +  + + M +  +A E 
Sbjct: 1262 GLVYFRQGMNDEALEYFTKAIEVESK----------YDLSMYNSGLVYEKMNQKDKALEW 1311

Query: 264  YPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEK 323
            Y   A A N   N    +   FL ++  +  + + N       S    A+ Y     YE+
Sbjct: 1312 YK-KAFAAN-PNNKKSLSRIEFLSKKKEDPTIDLENQ-----ESNLQTAKDY-----YEQ 1359

Query: 324  AGLYY-----MASVKEINKPHEFIFPYYG----LGQVQLKLGDFRSALTNFEKVLEIYPD 374
            +  YY     + S++ + K  E    Y+     LG V  +   F  A+ N++K +EI P 
Sbjct: 1360 SIKYYNQIKDLDSIRCLKKAIELDPNYFEAYDRLGLVHEENNRFEEAIENYKKAIEINPQ 1419

Query: 375  NCETLKALGHIYV-----------------------QLGQIEKAQELLR-------KAAK 404
            + +++ +L +IY+                       + G + + Q++L        KA +
Sbjct: 1420 SFDSINSLMNIYLDKKMINEAKDFYNQVPKCAETYYEFGLVYQDQKMLDEAVESYLKAIE 1479

Query: 405  IDPRDAQAFIDLGELLISSDTGAALDA--FKTARTLLKKAGEEVPIEVL--NNIGVIHFE 460
            ++P+   AFI LG         A LD   F  A    KK  E  P + +  NNIG+++FE
Sbjct: 1480 LNPKYINAFIQLG--------NAYLDKLLFDKAIESYKKIIEIDPSKAIAYNNIGLVYFE 1531

Query: 461  KGEFESAHQSFKDAL 475
            +   + A + F+ A+
Sbjct: 1532 QEMNDLALEQFQKAI 1546



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 120/541 (22%), Positives = 226/541 (41%), Gaps = 86/541 (15%)

Query: 168  QACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLD 227
            Q+   +N+ +  DS+   K+A+++ P+   A    +GL   +  +  +A + +++A++++
Sbjct: 1359 QSIKYYNQIKDLDSIRCLKKAIELDPNYFEAYD-RLGLVHEENNRFEEAIENYKKAIEIN 1417

Query: 228  PENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLV 287
            P++ +++ +L  + L        +K + + +  +   P CA    Y      +  Q  L 
Sbjct: 1418 PQSFDSINSLMNIYLD-------KKMINEAKDFYNQVPKCAET--YYEFGLVYQDQKML- 1467

Query: 288  EQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYG 347
            ++  E+ L      P   +++  L  +Y  K  ++KA   Y   + EI+      +   G
Sbjct: 1468 DEAVESYLKAIELNPKYINAFIQLGNAYLDKLLFDKAIESY-KKIIEIDPSKAIAYNNIG 1526

Query: 348  LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 407
            L   + ++ D   AL  F+K +EI P    +L   G +Y +  Q +KA E  RK  +I+P
Sbjct: 1527 LVYFEQEMNDL--ALEQFQKAIEINPKYELSLYNSGLVYERKDQNDKALECYRKVLEINP 1584

Query: 408  RDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEE---------------------- 445
             + ++   + +++         + F   + L KK G+E                      
Sbjct: 1585 NEQKSLSRI-QIIKQKQNKTLNEKFDLLKVLQKKLGKEFTSKAEEYFKQGFLYFMEQKYD 1643

Query: 446  VPIEVLNN--------------IGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTY 491
            + IE L                +G I+ +K  FE A   +K AL   I   LL  K    
Sbjct: 1644 MSIECLKKAIEINPNYCDAYERLGFIYEQKKMFEEAVIYYKKALQ--INPKLL--KVIKI 1699

Query: 492  VIDASASMLQFKDMQLFHRF--ENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYR 549
            V+D   +     + + F+    +N   + EL      +  N   L E I++       Y+
Sbjct: 1700 VMDIYLNKKMVNEAKDFYDSIAKNSDTYYEL----AQIYQNQNMLDESINN-------YQ 1748

Query: 550  LILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLEL--KND 607
             +L      +DAY+ L ++   +   + ++E   + L++N K P A + +G +    KND
Sbjct: 1749 KVLELNNKDIDAYVSLGSVYLNKLYYEKALECYQKILEINSKEPVAYNNIGIVHFRQKND 1808

Query: 608  DWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRV 667
            D   A E F  A +     +    LSL N    + L  E++  K      EKA E Y +V
Sbjct: 1809 DL--ALEYFNKALEQNPKYE----LSLYN----SGLVYERKNLK------EKALECYNKV 1852

Query: 668  I 668
            +
Sbjct: 1853 L 1853



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 86/383 (22%), Positives = 166/383 (43%), Gaps = 57/383 (14%)

Query: 130  TWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRAL 189
            T+    Q+   +  ++++ + ++ VLE +  ++ A +    V  N+  Y  +LE Y++ L
Sbjct: 1726 TYYELAQIYQNQNMLDESINNYQKVLELNNKDIDAYVSLGSVYLNKLYYEKALECYQKIL 1785

Query: 190  QVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAG 249
            +++   P A    IG+  ++      A + F +AL+ +P+   +L    ++  + N    
Sbjct: 1786 EINSKEPVAYN-NIGIVHFRQKNDDLALEYFNKALEQNPKYELSLYNSGLVYERKNLK-- 1842

Query: 250  IRKGMEKMQRAFEIYPYCAMAL---NYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSH 306
              K +E   +   + P    AL   N L+N    T +  + EQ        T     K  
Sbjct: 1843 -EKALECYNKVLALNPTEKKALSRINALSND---TDKMEVEEQQQNVQKQDTEFQTAKD- 1897

Query: 307  SYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFE 366
             Y +    Y++K   +KA   Y  ++ EI+ P  F   Y  +G +Q     F  A+ +++
Sbjct: 1898 -YLDQGFKYYNKLLDDKAIECYKKAL-EID-PSYFE-AYEKIGLLQKANKKFEEAIESYK 1953

Query: 367  KVLEIYPDNCETLKALGHIYV-----------------------QLGQIEKAQELL---- 399
            K +EI P     +K++ +IY+                       ++G I + Q ++    
Sbjct: 1954 KAIEINPKCYSAIKSVMNIYLDKKMISEAKSFYDSIQKCATTYYEMGIIYQRQNMIDEAI 2013

Query: 400  ---RKAAKIDPRDAQAFIDLGELLISSDTGAALDA--FKTARTLLKKAGEEVPIEVL--N 452
               +KA + DP+   A+I LG         + LD   +  A    KKA E  P +V+  N
Sbjct: 2014 SNYQKAIEQDPKYKSAYIQLG--------NSYLDKVQYDQAIECYKKALEIDPNDVIAYN 2065

Query: 453  NIGVIHFEKGEFESAHQSFKDAL 475
            NIG+I++ + + + A + +  A+
Sbjct: 2066 NIGLIYYNQEKIDLALEYYNKAI 2088



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 63/273 (23%), Positives = 112/273 (41%), Gaps = 18/273 (6%)

Query: 141  KGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIR 200
            K   ++A + F   +E +     A +    +   + +Y  + E Y++A+++ P    A  
Sbjct: 2547 KSMFDEAITCFSKAIELNPKYANAYIKLGNIYLKQIKYEKARECYEKAIEIDPKQVVAYN 2606

Query: 201  LGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRA 260
              IGL  Y L     A   +Q+ALQ++P  + +L    +     N+    +K +E   +A
Sbjct: 2607 -NIGLVYYNLKNDDLALSYYQKALQINPRYILSLYNSGLAYEMKNQN---QKALEFYNKA 2662

Query: 261  FEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSH-SYYNLARSYHSKG 319
             E+ P     L  +      TG   + E   +  L+       KS   YY    SY++K 
Sbjct: 2663 LEVDPNDVKTLTRMTQLLLKTGG--IDEPDVDNLLSDFGINVQKSAIDYYKQGYSYYTKK 2720

Query: 320  DYEKAGLYYMASVKEINKPHE----FIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDN 375
              ++       S+K +NK  E    F   Y  L  +  +      A+ N+ K +E  P+ 
Sbjct: 2721 MKDQ-------SIKCLNKAIEMDPNFFEAYDKLALIYEEKKMLDKAIENYRKAIEKNPNF 2773

Query: 376  CETLKALGHIYVQLGQIEKAQELLRKAAKIDPR 408
                  LG+IY++    + A    +K  +IDP 
Sbjct: 2774 INGYNKLGNIYLEKKMFDDAIVCYQKCLEIDPN 2806



 Score = 48.1 bits (113), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 77/372 (20%), Positives = 150/372 (40%), Gaps = 43/372 (11%)

Query: 117  YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 176
            Y K   ++  +   +V  G + L K   E+A   ++ +LE +     A      V F + 
Sbjct: 1747 YQKVLELNNKDIDAYVSLGSVYLNKLYYEKALECYQKILEINSKEPVAYNNIGIVHFRQK 1806

Query: 177  RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVA 236
                +LE++ +AL+ +P    ++    GL   +     KA + + + L L+P   +AL  
Sbjct: 1807 NDDLALEYFNKALEQNPKYELSL-YNSGLVYERKNLKEKALECYNKVLALNPTEKKALSR 1865

Query: 237  LAVM--DLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETA 294
            +  +  D    E    ++ ++K    F+       A +YL   F +  +  L ++  E  
Sbjct: 1866 INALSNDTDKMEVEEQQQNVQKQDTEFQ------TAKDYLDQGFKYYNK-LLDDKAIECY 1918

Query: 295  LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASV--------------------KE 334
                   P+   +Y  +     +   +E+A   Y  ++                    K 
Sbjct: 1919 KKALEIDPSYFEAYEKIGLLQKANKKFEEAIESYKKAIEINPKCYSAIKSVMNIYLDKKM 1978

Query: 335  INKPHEFI-------FPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYV 387
            I++   F          YY +G +  +      A++N++K +E  P        LG+ Y+
Sbjct: 1979 ISEAKSFYDSIQKCATTYYEMGIIYQRQNMIDEAISNYQKAIEQDPKYKSAYIQLGNSYL 2038

Query: 388  QLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSD-TGAALDAFKTARTLLKKAGEEV 446
               Q ++A E  +KA +IDP D  A+ ++G +  + +    AL+ +  A  +  K   E+
Sbjct: 2039 DKVQYDQAIECYKKALEIDPNDVIAYNNIGLIYYNQEKIDLALEYYNKAIEINPKY--EL 2096

Query: 447  PIEVLNNIGVIH 458
            PI    N G+I+
Sbjct: 2097 PIY---NSGLIY 2105



 Score = 46.6 bits (109), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 91/449 (20%), Positives = 181/449 (40%), Gaps = 84/449 (18%)

Query: 90  GVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASS 149
           G+ Y++LG ++            A + Y KA  I+    S  +  G L   +   E A  
Sbjct: 458 GIAYSHLGNVKE-----------ALECYKKALEINPKFVSALINLGALYTNQKIYEDAIK 506

Query: 150 AFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYK 209
            ++ +L  + +N+  L     +   +  + +++ ++K+ +++ P+   +    IG+    
Sbjct: 507 CYQTLLTIEENNLDGLNNLGYIYSQKNMFDEAINYFKKVIEIDPTYYLS-YYNIGVAYES 565

Query: 210 LGQLGKARQAFQRALQLDPE---------NV--------EAL-----VALAVM------- 240
              L +A + + +  ++ P+         NV        EA      V+  ++       
Sbjct: 566 KQMLDEALEYYNKVEEMSPKYFIVFVRQGNVYSQKNMQNEAFQCYNKVSEQILKNIYSLS 625

Query: 241 -DLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETAL---A 296
            +L+ + A+ +++ ++  + A ++ P       Y+  +      H  + Q+ E      A
Sbjct: 626 EELEISRASFVQESIKNYEDAVKLNP------KYIQFYHSLGLLHSNINQMEEAMRYFQA 679

Query: 297 VTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLG 356
                P   +SY  L   Y  K  Y+KA    +    EI++        +GL     K+ 
Sbjct: 680 AIELDPKYINSYLELGNIYSGKAIYDKAQQC-LEKALEIDQNSASALNNFGLFYFTQKMD 738

Query: 357 DFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAF--- 413
           D   AL +F+K LEI P+    +   G +Y     I+KA E  +    I+P D +A    
Sbjct: 739 D--KALESFKKALEINPNYELAIYNSGLVYESKNLIDKALECYKNVLLINPTDKKALSKI 796

Query: 414 -----------IDLGELLISSDTG--AALDAF----------KTARTL--LKKAGEEVP- 447
                      ++L E+L  ++    +A D +          K A+++  LKKA E  P 
Sbjct: 797 DQLNQKDGKNNVNLEEILQDANKNLKSAKDFYQQGFVYYIQRKDAKSIECLKKAIELDPK 856

Query: 448 -IEVLNNIGVIHFEKGEFESAHQSFKDAL 475
             +  + +G+++ EK     A +S+K A 
Sbjct: 857 YFDAYDKLGLLYKEKKMISQAIESYKKAF 885



 Score = 45.8 bits (107), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 87/345 (25%), Positives = 141/345 (40%), Gaps = 57/345 (16%)

Query: 168  QACVEFNRGRYSDSLEFYKRALQVHPS-CPGAIRLGIGLCRYKLGQLGKARQAFQRALQL 226
            Q  + F   +Y  S+E  K+A++++P+ C    RLG    + K+    +A   +++ALQ+
Sbjct: 1632 QGFLYFMEQKYDMSIECLKKAIEINPNYCDAYERLGFIYEQKKM--FEEAVIYYKKALQI 1689

Query: 227  DPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALN---YLANHFFFTGQ 283
            +P+ ++  V   VMD+  N      K M    + F    Y ++A N   Y      +  Q
Sbjct: 1690 NPKLLK--VIKIVMDIYLN------KKMVNEAKDF----YDSIAKNSDTYYELAQIYQNQ 1737

Query: 284  HFLVEQLT--ETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEF 341
            + L E +   +  L + N       +Y +L   Y +K  YEKA   Y   + EIN     
Sbjct: 1738 NMLDESINNYQKVLELNNKD---IDAYVSLGSVYLNKLYYEKALECYQ-KILEINSKEPV 1793

Query: 342  IFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRK 401
               Y  +G V  +  +   AL  F K LE  P    +L   G +Y +    EKA E   K
Sbjct: 1794 --AYNNIGIVHFRQKNDDLALEYFNKALEQNPKYELSLYNSGLVYERKNLKEKALECYNK 1851

Query: 402  AAKIDPRDAQAFIDLGELLISSDTGAALD----------AFKTARTLL------------ 439
               ++P + +A   +  L   +D     +           F+TA+  L            
Sbjct: 1852 VLALNPTEKKALSRINALSNDTDKMEVEEQQQNVQKQDTEFQTAKDYLDQGFKYYNKLLD 1911

Query: 440  -------KKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDAL 475
                   KKA E  P   E    IG++     +FE A +S+K A+
Sbjct: 1912 DKAIECYKKALEIDPSYFEAYEKIGLLQKANKKFEEAIESYKKAI 1956



 Score = 43.5 bits (101), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 64/281 (22%), Positives = 112/281 (39%), Gaps = 50/281 (17%)

Query: 113  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
            A ++YNKA  +D ++  T     QLLL  G ++          E D DN+ +       +
Sbjct: 2655 ALEFYNKALEVDPNDVKTLTRMTQLLLKTGGID----------EPDVDNLLS-------D 2697

Query: 173  FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 232
            F       ++++YK+                G   Y      ++ +   +A+++DP   E
Sbjct: 2698 FGINVQKSAIDYYKQ----------------GYSYYTKKMKDQSIKCLNKAIEMDPNFFE 2741

Query: 233  ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTE 292
            A   LA++     E   + K +E  ++A E  P      N++ N +   G  +L +++ +
Sbjct: 2742 AYDKLALI---YEEKKMLDKAIENYRKAIEKNP------NFI-NGYNKLGNIYLEKKMFD 2791

Query: 293  TALAVTNH----GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGL 348
             A+          P   + YYN A +Y  K    +A   Y    K IN     I  Y  L
Sbjct: 2792 DAIVCYQKCLEIDPNYYYGYYNQAIAYEEKQLDSQAIYCYK---KAINIDPTGINAYINL 2848

Query: 349  GQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQL 389
            G +         +L+ F+K LEI  ++ E +  L     Q+
Sbjct: 2849 GMIYQDQEKASKSLSCFKKTLEIDEEDFEGIDFLKQTKSQI 2889



 Score = 43.5 bits (101), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 71/328 (21%), Positives = 137/328 (41%), Gaps = 41/328 (12%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
           A +YYNK   +       +V +G +   K    +A   +  V E    N+ +L  +  +E
Sbjct: 572 ALEYYNKVEEMSPKYFIVFVRQGNVYSQKNMQNEAFQCYNKVSEQILKNIYSLSEE--LE 629

Query: 173 FNRGRY-SDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENV 231
            +R  +  +S++ Y+ A++++P         +GL    + Q+ +A + FQ A++LDP+ +
Sbjct: 630 ISRASFVQESIKNYEDAVKLNPKYIQFYH-SLGLLHSNINQMEEAMRYFQAAIELDPKYI 688

Query: 232 EALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLT 291
            + + L  +    +  A   K  + +++A EI    A ALN     F+FT +  + ++  
Sbjct: 689 NSYLELGNI---YSGKAIYDKAQQCLEKALEIDQNSASALNNFG-LFYFTQK--MDDKAL 742

Query: 292 ETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYY-------------MASVKEINKP 338
           E+        P    + YN    Y SK   +KA   Y             ++ + ++N+ 
Sbjct: 743 ESFKKALEINPNYELAIYNSGLVYESKNLIDKALECYKNVLLINPTDKKALSKIDQLNQK 802

Query: 339 H-------EFIF-----------PYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLK 380
                   E I             +Y  G V         ++   +K +E+ P   +   
Sbjct: 803 DGKNNVNLEEILQDANKNLKSAKDFYQQGFVYYIQRKDAKSIECLKKAIELDPKYFDAYD 862

Query: 381 ALGHIYVQLGQIEKAQELLRKAAKIDPR 408
            LG +Y +   I +A E  +KA +I+P+
Sbjct: 863 KLGLLYKEKKMISQAIESYKKAFEINPK 890



 Score = 43.5 bits (101), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 64/310 (20%), Positives = 122/310 (39%), Gaps = 40/310 (12%)

Query: 145  EQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIG 204
            E A   F+   E +     A+L    +   +    ++ EF+ + ++ +P  P  +   IG
Sbjct: 2483 EDAIQNFQKAFETNPKCYDAVLSLMAIYLEKKTLFEAKEFHNQIIEKNPDVP-ELHHKIG 2541

Query: 205  LCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIY 264
            +   +     +A   F +A++L+P+   A + L  + L+        K  E  ++A EI 
Sbjct: 2542 VAYQEKSMFDEAITCFSKAIELNPKYANAYIKLGNIYLKQ---IKYEKARECYEKAIEID 2598

Query: 265  PYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 324
            P   +A N +   ++      L     + AL +    P    S YN   +Y  K   +KA
Sbjct: 2599 PKQVVAYNNIGLVYYNLKNDDLALSYYQKALQI---NPRYILSLYNSGLAYEMKNQNQKA 2655

Query: 325  GLYYMAS-------VKEINKPHEFIFPYYGLGQVQLK--LGDF-----RSALTNFE---- 366
              +Y  +       VK + +  + +    G+ +  +   L DF     +SA+  ++    
Sbjct: 2656 LEFYNKALEVDPNDVKTLTRMTQLLLKTGGIDEPDVDNLLSDFGINVQKSAIDYYKQGYS 2715

Query: 367  ---------------KVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQ 411
                           K +E+ P+  E    L  IY +   ++KA E  RKA + +P    
Sbjct: 2716 YYTKKMKDQSIKCLNKAIEMDPNFFEAYDKLALIYEEKKMLDKAIENYRKAIEKNPNFIN 2775

Query: 412  AFIDLGELLI 421
             +  LG + +
Sbjct: 2776 GYNKLGNIYL 2785



 Score = 41.2 bits (95), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 96/461 (20%), Positives = 187/461 (40%), Gaps = 52/461 (11%)

Query: 361 ALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 420
           A+  ++K +EI P+  E    LG +Y   G I++A +   KA  IDP+  +++I L    
Sbjct: 130 AIKCYKKAIEIDPNCTEAYHNLGIVYEGKGLIQQAYQCYLKAQSIDPKYTKSYISLAR-- 187

Query: 421 ISSDTGAALD-AFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDALGD 477
                   LD   + A   LKKA E  P  +E    +G ++  +     A + +K A+  
Sbjct: 188 -----NYYLDFQIQDAIKSLKKAIEIEPNSVEAYERLGFVYQNEKNNSEAIKYYKKAI-- 240

Query: 478 GIWLTLLDSKTKTYVIDASASMLQFKD-MQLFHR-FENDGNHVELPWNKVTVLFNLARLL 535
            I     +++    +I  + +   F D  Q + R  E D   V+  +N + +++    ++
Sbjct: 241 EIDPNYYNAQFNLALIYQNQN--NFDDSFQCYRRAIEIDPKQVD-AYNNIGLIYYYKGMI 297

Query: 536 EQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNA 595
           ++  ++      Y+  L     Y  AY   A   +    +  +I+   + +++N  +  +
Sbjct: 298 KEALES------YKKALEIDPKYYKAYHNSALAYEKEKLIDEAIQCYKKTIEINPSFLKS 351

Query: 596 LSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNY-----FAALRNEKRA- 649
           L+ LGD+ + N+   +  E F+      D +  +   SL +  Y       A+ + K   
Sbjct: 352 LTRLGDICIDNNLLDEGIECFKKII-QLDPQSYFDHYSLADLYYKKNMLVEAINHYKITL 410

Query: 650 ---PKLEATH------------LEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVS 694
              P+  + H            LE+A + Y + I  + ++  A   +G+  +  G    +
Sbjct: 411 EINPQQLSAHLYLGISYKKQGNLEEALQCYKKAIQLNPNSQEAHFNSGIAYSHLGNVKEA 470

Query: 695 KDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILL 754
            + + +  E     V        INL  +Y  Q  +  A+K YQ  L     N D   L 
Sbjct: 471 LECYKKALEINPKFV-----SALINLGALYTNQKIYEDAIKCYQTLLTIEENNLDG--LN 523

Query: 755 YLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQ 795
            L   + +   + +      + I + P+ Y   ++ GVA +
Sbjct: 524 NLGYIYSQKNMFDEAINYFKKVIEIDPTYYLSYYNIGVAYE 564


>gi|407410530|gb|EKF32930.1| hypothetical protein MOQ_003209 [Trypanosoma cruzi marinkellei]
          Length = 912

 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 140/597 (23%), Positives = 248/597 (41%), Gaps = 62/597 (10%)

Query: 125 MHEPSTWVGKGQLLLAKG-EVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLE 183
           +H P     +G   +A G  ++ A   F+  + ADR  V A LG A V ++  RY     
Sbjct: 79  LHRPVLLYLEGLAAMASGTSLQTARVKFEEAIRADRHFVLARLGLAAVSYHMKRYKKCFS 138

Query: 184 FYKRALQ-VHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDL 242
            Y+  L+ +  SCP  +R+G+GLC Y L  L  A++  +RAL+++ ++  AL AL V+ L
Sbjct: 139 HYRVVLETLGSSCPPIVRVGMGLCAYHLNHLDYAQRCLERALEVNEDDELALFALLVVFL 198

Query: 243 QANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGP 302
              +   I K +E  QR   I P  A  L  +A   +F               AVT    
Sbjct: 199 DRRQ---IPKVIEVAQRLRGILPENATVLLKVAELVYFR--------------AVTQE-- 239

Query: 303 TKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSAL 362
            +  +  N  R               +A V+ +    E     Y  G++ L LGD  +A 
Sbjct: 240 -RVKASANPIRR-------------LLAEVRRVATVEESAAADYQEGRLCLALGDLSNAR 285

Query: 363 TNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS 422
              E  +++ P+            +  G+  +A++LL +  K  P   +    L   + +
Sbjct: 286 LLLESAMQVLPNLLAARIHYARFLLLSGRETEAEQLLLRINKDHPNHKEVLQLLA--VYA 343

Query: 423 SDTGAALDAFKTARTLLKKAGEEVPIEVLN-NIG--VIHFEKGE---FESAHQSFKDALG 476
           S  G    A + +R L +      P ++ + +I       +KGE     S     +  +G
Sbjct: 344 SRHGLHEKALEYSRRLTEIVA---PGDIRSWSIASWCARLDKGESKKLMSHLARIRKEVG 400

Query: 477 DGIWLTLLDSKTKTYVIDASASMLQ-FKDMQLFHRFENDGNHVELPWNKVTVLFNLARLL 535
           + + + L+        +      LQ   D +L   F  + N   LP   V ++FNLA LL
Sbjct: 401 EPVSMELM---ANIAALGGDTEALQRIIDCELGADFLGEPN---LPVVYVPLVFNLALLL 454

Query: 536 EQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNA 595
           E+  D   A  LY  ++ ++  +   Y+RL  +AK    L+ ++  +    +V  + P +
Sbjct: 455 EET-DRTRARQLYIFLVKQHGYFRPPYIRLHVLAKDDGFLKQAVAWLVLLQQVLPEDPTS 513

Query: 596 LSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEAT 655
           L+ +G++  +      A    R+A     G+     L+ G    + + ++ K   +    
Sbjct: 514 LASIGEILFEKSRVGAAMTALRSAR----GRPLPVALAFGAAFLWCSQQHGKDNRRF--- 566

Query: 656 HLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQ 712
            L  AK+ +  V+ +   N+ AA+G    L  +  +D  + L  +V E      +V+
Sbjct: 567 -LASAKDRFAFVLRRDNGNVLAAHGLACCLGLEADYDRCQCLLDRVGEVRPNCSYVR 622


>gi|428319148|ref|YP_007117030.1| histidine kinase [Oscillatoria nigro-viridis PCC 7112]
 gi|428242828|gb|AFZ08614.1| histidine kinase [Oscillatoria nigro-viridis PCC 7112]
          Length = 1018

 Score = 96.3 bits (238), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 97/381 (25%), Positives = 174/381 (45%), Gaps = 28/381 (7%)

Query: 109 HFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQ 168
            F  A  +++K+ +I+ + P T       L + G+ E+A    +  ++ +  N P  L +
Sbjct: 280 QFEKAWHFFDKSLQIEPNAPITLNLYATALASNGQHEKALEFLERSIQIE-PNAPITLSR 338

Query: 169 -ACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL-----GQLGKARQAFQR 222
            A    + G++  +L++++R+LQ+ P+ P      I L RY       GQ  KA Q F+R
Sbjct: 339 YATALTSNGQHEKALQYFERSLQLEPNAP------ITLSRYATALTSNGQHEKALQYFER 392

Query: 223 ALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTG 282
           +LQL+P N   L   A     + +     K ++ ++R+ ++ P   + LN  AN    TG
Sbjct: 393 SLQLEPNNPITLSRYATALASSGQH---EKLVQILERSLQLEPNDPITLNLYANALASTG 449

Query: 283 QHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK-EINKPHEF 341
           QH    Q  E +L +  + P     Y   A +  S G YEKA  Y+  S++ E N P   
Sbjct: 450 QHEKALQYFELSLQLEPNAPITLSRY---ATALASTGQYEKALQYFELSLQLEPNAPITL 506

Query: 342 IFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRK 401
                 L       G    AL  FE+ ++I P++  TL    H     GQ EKA +    
Sbjct: 507 SRYANALASN----GHPDQALQFFERSIQIEPNHPRTLSCYAHTLATTGQYEKALQYFEL 562

Query: 402 AAKIDPRDAQ---AFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLN-NIGVI 457
           + +I P++A+   +++D    L+    G   +A    + +  +A       V+  N+G +
Sbjct: 563 SLQIKPQNARTLSSYLDFQYALVLEKVGKHQEAIDQLKAIKIEALTPYQANVIRVNLGRL 622

Query: 458 HFEKGEFESAHQSFKDALGDG 478
           +++  + E  ++ F+ A+ + 
Sbjct: 623 YYQIKQPEKGNEYFEAAIANS 643



 Score = 59.7 bits (143), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 61/240 (25%), Positives = 98/240 (40%), Gaps = 22/240 (9%)

Query: 176 GRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRY-----KLGQLGKARQAFQRALQLDPEN 230
           G++  +  F+ ++LQ  P         + L RY       GQ  KA   F ++LQ  P++
Sbjct: 211 GQFEKAWHFFDKSLQNKPDD------AVTLSRYANALASNGQFEKAWHFFDKSLQNKPDD 264

Query: 231 VEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQL 290
              L   A   L +N      K      ++ +I P   + LN  A      GQH    + 
Sbjct: 265 AVTLSRYANA-LASN--GQFEKAWHFFDKSLQIEPNAPITLNLYATALASNGQHEKALEF 321

Query: 291 TETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK-EINKPHEFIFPYYGLG 349
            E ++ +  + P     Y   A +  S G +EKA  Y+  S++ E N P       Y   
Sbjct: 322 LERSIQIEPNAPITLSRY---ATALTSNGQHEKALQYFERSLQLEPNAP--ITLSRYATA 376

Query: 350 QVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRD 409
                 G    AL  FE+ L++ P+N  TL          GQ EK  ++L ++ +++P D
Sbjct: 377 LT--SNGQHEKALQYFERSLQLEPNNPITLSRYATALASSGQHEKLVQILERSLQLEPND 434



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 85/391 (21%), Positives = 152/391 (38%), Gaps = 62/391 (15%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
           A QY+ ++ +++ + P T       L + G+ E+A   F+  L+ + +N   L   A   
Sbjct: 352 ALQYFERSLQLEPNAPITLSRYATALTSNGQHEKALQYFERSLQLEPNNPITLSRYATAL 411

Query: 173 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 232
            + G++   ++  +R+LQ+ P+ P  + L         GQ  KA Q F+ +LQL+P    
Sbjct: 412 ASSGQHEKLVQILERSLQLEPNDPITLNLYANALA-STGQHEKALQYFELSLQLEPN--- 467

Query: 233 ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTE 292
           A + L+             K ++  + + ++ P   + L+  AN     G      Q  E
Sbjct: 468 APITLSRYATALASTGQYEKALQYFELSLQLEPNAPITLSRYANALASNGHPDQALQFFE 527

Query: 293 TALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY--YGLGQ 350
            ++ +  + P     Y   A +  + G YEKA  Y+  S++   +    +  Y  +    
Sbjct: 528 RSIQIEPNHPRTLSCY---AHTLATTGQYEKALQYFELSLQIKPQNARTLSSYLDFQYAL 584

Query: 351 VQLKLGDFRSALTNFE--KVLEIYPDNCETLKA-LGHIYVQLGQIEK------------- 394
           V  K+G  + A+   +  K+  + P     ++  LG +Y Q+ Q EK             
Sbjct: 585 VLEKVGKHQEAIDQLKAIKIEALTPYQANVIRVNLGRLYYQIKQPEKGNEYFEAAIANSD 644

Query: 395 ----------------------------AQELLRKAAKIDPRDAQAF----IDLGE---- 418
                                       A ELLR+  +  PR AQA     ++L E    
Sbjct: 645 DKDRTDDKEITLLYISRSILATKPYSERAVELLRQIKEDSPRYAQALEMLTLNLSEEGYF 704

Query: 419 LLISSDTGAAL-DAFKTARTLLKKAGEEVPI 448
            +  +DT   L D     R +  K   E+ I
Sbjct: 705 EMFKTDTQIGLSDTEMLNRAMYHKIANEISI 735


>gi|407041882|gb|EKE40998.1| TPR repeat protein [Entamoeba nuttalli P19]
          Length = 921

 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 173/798 (21%), Positives = 334/798 (41%), Gaps = 119/798 (14%)

Query: 151 FKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 210
           FK  LE +++  PAL+G A  E    +   +L ++ +AL+  P+   +IR GIG   Y  
Sbjct: 142 FKRALEINKNYAPALIGLALCELKDHKDGVALSYFIQALKKQPT-NVSIRCGIGRIYYSQ 200

Query: 211 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 270
            ++  A + ++ AL LD   ++AL+ L+ +         +++ +E   RA  I   CA A
Sbjct: 201 KEIKLAIRCYESALVLDNICMDALINLSRIYWDIRTPQTVKRALELANRALMIDNKCAPA 260

Query: 271 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA----GL 326
              L         + +V +    A+   N    K + ++ L R  H K D+ KA     +
Sbjct: 261 AIVLCEAAMKCNNYKVVSEFANIAINYGNE-QEKIYGHFTLGRIAHQKQDFVKAKEEYNI 319

Query: 327 YYMASVKEINKPHEFIFP--YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGH 384
            Y++  K        +FP  +Y + QV  +  ++          L+    + + LK LG 
Sbjct: 320 GYLSDTK-------CMFPALHYRMAQVLFREKNYIQVEKILMNCLKYNGGDFDVLKLLGF 372

Query: 385 IYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGE 444
             ++L +I +  E L KA+ +   D    + +  LL       AL+ ++    +      
Sbjct: 373 TELKLNKINETIEYLEKAS-VFKVDYTIELIVSSLLEEKQPKKALEHYQRINEI------ 425

Query: 445 EVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKD 504
              +EVLNN+G  ++   E   + + F+ AL                 +D  + +     
Sbjct: 426 NSTVEVLNNMGCCYYFIQELIKSKECFEKALN----------------MDKGSEL----- 464

Query: 505 MQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLR 564
                              + T+LFN  R+LE++     A+  Y+ I+ +   Y DA +R
Sbjct: 465 -------------------RTTLLFNKGRVLEEMKLWDEANKCYQEIIKESPWYFDARIR 505

Query: 565 LAAIAKARNNLQL-SIELVNEALKVNGKYPN---ALSMLGDLELKNDDWVKAKETFRAAS 620
                       L S ELV   +     +PN   A  +LG++  +      A + F + +
Sbjct: 506 RCYHLWDEKQYNLASQELVQTII----NFPNCEDAKLLLGEMLCQQGKIDDAFKIFNSVT 561

Query: 621 DATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANG 680
           +  +  + YA L+L         +  ++ PK     LE  K LY +++    +N+ A  G
Sbjct: 562 NH-NRTNLYAFLALAR----VMAKYGRQDPK---QQLEAVK-LYGKILNADPTNVLALGG 612

Query: 681 AGVVLAEKGQ-------FDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALA 733
             +  AE+         F+V  +   +V +           +V  ++   Y+   N  +A
Sbjct: 613 LALTTAERKDNSSNPIPFNVIIESLQRVNDVCPSY------EVMFSMGTCYYNAHNIQMA 666

Query: 734 MKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVA 793
             ++++ L +  Y    ++L  LA+  +   ++++  + L RA+ + P +  +       
Sbjct: 667 KSIFESTLNQ--YGEQVEVLNGLAQCEFMLNRYKEALEHLERALKIEPVSQIV-----YN 719

Query: 794 MQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCK 853
            Q  ++  L++ ++     +    +L  +  V  +L   +NL        K+ T  E  K
Sbjct: 720 YQLVASCYLEEQKQKKKLYKEENEQLRQS--VIGYLQQFNNLKY------KMKTFEENWK 771

Query: 854 HLLDAAKIHREAAER-----EEQQNRQ-RQEAARQAALAEEARRKAEEQKKYLLEKRKLE 907
           +L++ A+  +E  +R     EEQ+ R+  +E  R+    E+ +++  E+KK ++EK K E
Sbjct: 772 NLIEQARKDQEEKQRLIKEHEEQRKRKIEEENQRKKEEEEKEQQRRMEEKKMIIEKTKKE 831

Query: 908 DE------QKRLRQQEEH 919
            E      ++RL+  EE+
Sbjct: 832 QEMIGKRIEERLKDVEEN 849



 Score = 42.4 bits (98), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 58/133 (43%), Gaps = 8/133 (6%)

Query: 146 QASSAFKIVLEADRDNVPALLGQACVEFNR-GRYSDSLEF--YKRALQ-VHPSCPG-AIR 200
           +A   +  +L AD  NV AL G A     R    S+ + F     +LQ V+  CP   + 
Sbjct: 591 EAVKLYGKILNADPTNVLALGGLALTTAERKDNSSNPIPFNVIIESLQRVNDVCPSYEVM 650

Query: 201 LGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRA 260
             +G C Y    +  A+  F+  L    E VE L  LA  +   N     ++ +E ++RA
Sbjct: 651 FSMGTCYYNAHNIQMAKSIFESTLNQYGEQVEVLNGLAQCEFMLNR---YKEALEHLERA 707

Query: 261 FEIYPYCAMALNY 273
            +I P   +  NY
Sbjct: 708 LKIEPVSQIVYNY 720


>gi|330506685|ref|YP_004383113.1| TPR-repeat-containing protein [Methanosaeta concilii GP6]
 gi|328927493|gb|AEB67295.1| TPR-repeat protein [Methanosaeta concilii GP6]
          Length = 705

 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 90/377 (23%), Positives = 166/377 (44%), Gaps = 27/377 (7%)

Query: 104 REKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVP 163
           R   E +  + Q +++A +I+ H+  T +GKG LLLA+G    A  ++   L   +DNV 
Sbjct: 260 RYATEDYSSSLQAFDQALKINPHDIQTILGKGDLLLARGNFSSALESYSAALLLKKDNVS 319

Query: 164 ALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRA 223
           AL G+     + GR  ++ + Y+R L++ P    A++  I     +  +  +A + +   
Sbjct: 320 ALYGKGLALSSLGREKEANKCYRRILELEPDNIIALQ-KIADDLLERNESIQAAEHYGLI 378

Query: 224 LQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQ 283
           L  DP+N  AL+ +A   L           +  + +A + Y       +  +  +   G+
Sbjct: 379 LGQDPKNARALLGMAKAQLD----------LGDLDQALQSYEELLGHDSNSSAAWIGRGE 428

Query: 284 HFLVEQLTETALAVTNHG----PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPH 339
             L++   + A+   N      P    +   LA + H KG  E+A  YY A++ E  +P 
Sbjct: 429 ILLLQTNIDPAIESFNRALDIEPQNPDALMGLAEALHQKGRLEEARSYYEAAIAE--EPS 486

Query: 340 EFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELL 399
             +  Y GLG +    G++  ++  FE  L   P + E+L   G      G    A +  
Sbjct: 487 --VRGYRGLGNILCAQGEYGQSIPLFESALSQEPSDTESLMGKGLALAATGNSSGALQCF 544

Query: 400 RKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAG--EEVPIEVLNNIGVI 457
            +   ++P D+ A+ + G +       AAL  +  AR  L+KA        ++  N+G +
Sbjct: 545 NEIVSLNPEDSAAWSNRGSIF------AALGRYDEARESLQKAAGISSSSADIWYNLGQV 598

Query: 458 HFEKGEFESAHQSFKDA 474
           +        + Q+F++A
Sbjct: 599 YRLMDRHNQSRQAFENA 615



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 60/297 (20%), Positives = 135/297 (45%), Gaps = 11/297 (3%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
           A Q Y +    D +  + W+G+G++LL +  ++ A  +F   L+ +  N  AL+G A   
Sbjct: 405 ALQSYEELLGHDSNSSAAWIGRGEILLLQTNIDPAIESFNRALDIEPQNPDALMGLAEAL 464

Query: 173 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 232
             +GR  ++  +Y+ A+   PS  G   LG  LC    G+ G++   F+ AL  +P + E
Sbjct: 465 HQKGRLEEARSYYEAAIAEEPSVRGYRGLGNILCAQ--GEYGQSIPLFESALSQEPSDTE 522

Query: 233 ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTE 292
           +L+   +       ++G    ++       + P  + A +   + F   G++    +  +
Sbjct: 523 SLMGKGLALAATGNSSG---ALQCFNEIVSLNPEDSAAWSNRGSIFAALGRYDEARESLQ 579

Query: 293 TALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQ 352
            A  +++   + +  +YNL + Y     + ++   +  + +    P + +  +  LG  Q
Sbjct: 580 KAAGISS---SSADIWYNLGQVYRLMDRHNQSRQAFENATRL--SPDDPVL-WLELGLAQ 633

Query: 353 LKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRD 409
            + G+ + AL + ++ + + P N     +L       G+ ++A +   +  +I+P++
Sbjct: 634 ERTGEAKLALKSLQRAVVLDPKNEFAQYSLALALAGQGRFQEALQAFERVLEINPKN 690



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 118/560 (21%), Positives = 217/560 (38%), Gaps = 65/560 (11%)

Query: 281 TGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHE 340
           TG++ + +   ++AL +    P     Y  LA+S     DY+ A   Y  ++       E
Sbjct: 127 TGRYRMAQLCFDSALRLD---PGNMTLYNRLAQSQLMLEDYDHALRSYKKALSLEANNTE 183

Query: 341 FIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLR 400
            +F     G + L L  +  AL +F  +LE    +   LK     Y QLGQ+++A+E   
Sbjct: 184 ILF---NQGDLFLTLARYPEALNSFNLLLEQNKSDILALKGRAECYRQLGQVDRAEEDYY 240

Query: 401 KAAKIDPRDAQAFIDLGELLISS-DTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHF 459
              + +P D +++  LG +  ++ D  ++L AF  A  +         I+ +   G +  
Sbjct: 241 TVLEKNPEDFESWRGLGMVRYATEDYSSSLQAFDQALKI-----NPHDIQTILGKGDLLL 295

Query: 460 EKGEFESAHQSFKDAL-----------GDGIWLTLLDSKTKTYVIDASASMLQFKDMQLF 508
            +G F SA +S+  AL           G G+ L+ L  + +          L+  ++   
Sbjct: 296 ARGNFSSALESYSAALLLKKDNVSALYGKGLALSSLGREKEANKCYRRILELEPDNIIAL 355

Query: 509 HRFEND----------GNHVEL-----PWNKVTVLFNLARLLEQIHDTVAASVLYRLILF 553
            +  +D            H  L     P N    L  +A+    + D   A   Y  +L 
Sbjct: 356 QKIADDLLERNESIQAAEHYGLILGQDPKN-ARALLGMAKAQLDLGDLDQALQSYEELLG 414

Query: 554 KYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAK 613
              +   A++    I   + N+  +IE  N AL +  + P+AL  L +   +     +A+
Sbjct: 415 HDSNSSAAWIGRGEILLLQTNIDPAIESFNRALDIEPQNPDALMGLAEALHQKGRLEEAR 474

Query: 614 ETFRAASDATDGKDSYATL-----SLGNWN-----YFAALRNEK--------RAPKLEAT 655
             + AA         Y  L     + G +      + +AL  E         +   L AT
Sbjct: 475 SYYEAAIAEEPSVRGYRGLGNILCAQGEYGQSIPLFESALSQEPSDTESLMGKGLALAAT 534

Query: 656 -HLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMP 714
            +   A + +  ++  +  +  A +  G + A  G++D +++   +    +S S      
Sbjct: 535 GNSSGALQCFNEIVSLNPEDSAAWSNRGSIFAALGRYDEARESLQKAAGISSSSA----- 589

Query: 715 DVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLL 774
           D+W NL  VY        + + ++N  R      D  + L L        + +   KSL 
Sbjct: 590 DIWYNLGQVYRLMDRHNQSRQAFENATR--LSPDDPVLWLELGLAQERTGEAKLALKSLQ 647

Query: 775 RAIHLAPSNYTLRFDAGVAM 794
           RA+ L P N   ++   +A+
Sbjct: 648 RAVVLDPKNEFAQYSLALAL 667



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 90/380 (23%), Positives = 161/380 (42%), Gaps = 40/380 (10%)

Query: 110 FILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADR--DNVPALLG 167
           + LA +  N +  ID      W+ KG++L   G +++A  +   VL  D+  D   +L G
Sbjct: 62  YPLALERINLSLEIDDELAEAWLLKGRILFGLGYLQEAIRSLDQVLRIDQSLDEAWSLKG 121

Query: 168 QACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL--GIGLCRYKLGQLGKARQAFQRALQ 225
           +  +E   GRY  +   +  AL++    PG + L   +   +  L     A +++++AL 
Sbjct: 122 EIMME--TGRYRMAQLCFDSALRLD---PGNMTLYNRLAQSQLMLEDYDHALRSYKKALS 176

Query: 226 LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 285
           L+  N E L     + L     A   + +       E      +AL   A  +   GQ  
Sbjct: 177 LEANNTEILFNQGDLFLT---LARYPEALNSFNLLLEQNKSDILALKGRAECYRQLGQ-- 231

Query: 286 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 345
            V++  E    V    P    S+  L    ++  DY  +   +  ++K IN PH+ I   
Sbjct: 232 -VDRAEEDYYTVLEKNPEDFESWRGLGMVRYATEDYSSSLQAFDQALK-IN-PHD-IQTI 287

Query: 346 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKI 405
            G G + L  G+F SAL ++   L +  DN   L   G     LG+ ++A +  R+  ++
Sbjct: 288 LGKGDLLLARGNFSSALESYSAALLLKKDNVSALYGKGLALSSLGREKEANKCYRRILEL 347

Query: 406 DPRDAQAFIDLG-ELLISSDTGAALDAF--------KTARTLLKKAGEEVPIEVLNNIGV 456
           +P +  A   +  +LL  +++  A + +        K AR LL  A  ++ +        
Sbjct: 348 EPDNIIALQKIADDLLERNESIQAAEHYGLILGQDPKNARALLGMAKAQLDL-------- 399

Query: 457 IHFEKGEFESAHQSFKDALG 476
                G+ + A QS+++ LG
Sbjct: 400 -----GDLDQALQSYEELLG 414


>gi|67468967|ref|XP_650475.1| TPR repeat protein [Entamoeba histolytica HM-1:IMSS]
 gi|56467104|gb|EAL45089.1| TPR repeat protein [Entamoeba histolytica HM-1:IMSS]
          Length = 922

 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 178/803 (22%), Positives = 331/803 (41%), Gaps = 129/803 (16%)

Query: 151 FKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 210
           FK  LE +++  PAL+G A  E    +   +L ++ +AL+  P+   +IR GIG   Y  
Sbjct: 142 FKRALELNKNYAPALIGLALCELKDHKDGVALSYFIQALKKQPT-NVSIRCGIGRIYYSQ 200

Query: 211 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 270
            ++  A + ++ AL LD   ++AL+ L+ +         +++ +E   RA  I   CA A
Sbjct: 201 KEIKLAIRCYESALVLDNICMDALINLSRIYWDIRTPQTVKRALELANRALMIDNKCAPA 260

Query: 271 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA----GL 326
              L         + +V +    A+   N    K + ++ L R  H K D+ KA     +
Sbjct: 261 AIVLCEAAMKCNNYKVVSEFANVAINYGNE-QEKIYGHFTLGRIAHQKQDFVKAKEEYNI 319

Query: 327 YYMASVKEINKPHEFIFP--YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGH 384
            Y++  K        +FP  +Y + QV  +  ++          L+    + + LK LG 
Sbjct: 320 GYLSDTK-------CMFPALHYRMAQVLFREKNYIQVEKILMNCLKYNGGDFDVLKLLGF 372

Query: 385 IYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGE 444
             ++L +I +  E L KA+ +   D    + +  LL       AL+ ++    +      
Sbjct: 373 TELKLNKINETIEYLEKAS-VFKIDYTIELIVSSLLEEKQPKKALEHYQRINEI------ 425

Query: 445 EVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKD 504
              +EVLNN+G  ++   E   + + F+ AL                 +D  + +     
Sbjct: 426 NSTVEVLNNMGCCYYFIQELIKSKECFEKALN----------------MDKGSEL----- 464

Query: 505 MQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLR 564
                              + T+LFN  R+LE++     A+  Y+ I+ +   Y DA +R
Sbjct: 465 -------------------RTTLLFNKGRVLEEMKLWDEANKCYQEIIKENPWYFDARIR 505

Query: 565 LAAIAKARNNLQL-SIELVNEALKVNGKYPN---ALSMLGDLELKNDDWVKAKETFRAAS 620
                       L S ELV   +     +PN   A  +LG++  +      A + F + +
Sbjct: 506 RCYHLWDEKQYNLASQELVETII----NFPNCEDAKLLLGEMLCQQGKIDDAFKIFNSVT 561

Query: 621 DATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANG 680
           +  +  + YA L+L         +  ++ PK     LE  K LY +++    +N+ A  G
Sbjct: 562 NH-NRTNLYAFLALAR----VMAKYGRQDPK---QQLEAVK-LYGKILNADPTNVLALGG 612

Query: 681 AGVVLAEKGQ-------FDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALA 733
             +  AE+ +       F+V  +   +V +           +V  ++   Y+   N  +A
Sbjct: 613 LALTTAERKENSSNPIPFNVIIESLQRVNDVCPSY------EVMFSMGTCYYNAHNIQMA 666

Query: 734 MKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPS-----NYTLRF 788
             ++++ L +  Y    ++L  LA+  +   ++++  + L RA+ + P      NY L  
Sbjct: 667 KSIFESTLNQ--YGEQVEVLNGLAQCEFMLNRYKEALEHLERALKIEPVSQIVYNYQLVA 724

Query: 789 DAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGFDEKKINTH 848
              +  QK      QK +   +E             V  +L   +NL        K+ T 
Sbjct: 725 SCYLEEQK------QKKKLYKEENEQLRQ------NVIGYLQQFNNLKY------KMKTF 766

Query: 849 VEYCKHLLDAAKIHREAAER-----EEQQNRQ-RQEAARQAALAEEARRKAEEQKKYLLE 902
            E  K L++ A+  +E  +R     EEQ+ R+  +E  R+    E+ +++  E+KK ++E
Sbjct: 767 EENWKSLIEQARKDQEEKQRLIKEHEEQRKRKIEEENQRKKEEEEKEQQRRMEEKKMIIE 826

Query: 903 KRKLEDE------QKRLRQQEEH 919
           K K E E      ++RL+  EE+
Sbjct: 827 KTKKEQEMIGKRIEERLKDVEEN 849



 Score = 43.1 bits (100), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 56/133 (42%), Gaps = 8/133 (6%)

Query: 146 QASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDS---LEFYKRALQ-VHPSCPG-AIR 200
           +A   +  +L AD  NV AL G A     R   S +         +LQ V+  CP   + 
Sbjct: 591 EAVKLYGKILNADPTNVLALGGLALTTAERKENSSNPIPFNVIIESLQRVNDVCPSYEVM 650

Query: 201 LGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRA 260
             +G C Y    +  A+  F+  L    E VE L  LA  +   N     ++ +E ++RA
Sbjct: 651 FSMGTCYYNAHNIQMAKSIFESTLNQYGEQVEVLNGLAQCEFMLNR---YKEALEHLERA 707

Query: 261 FEIYPYCAMALNY 273
            +I P   +  NY
Sbjct: 708 LKIEPVSQIVYNY 720


>gi|449707453|gb|EMD47113.1| tetratricopeptide repeatcontaining protein [Entamoeba histolytica
           KU27]
          Length = 922

 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 178/803 (22%), Positives = 331/803 (41%), Gaps = 129/803 (16%)

Query: 151 FKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 210
           FK  LE +++  PAL+G A  E    +   +L ++ +AL+  P+   +IR GIG   Y  
Sbjct: 142 FKRALELNKNYAPALIGLALCELKDHKDGVALSYFIQALKKQPT-NVSIRCGIGRIYYSQ 200

Query: 211 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 270
            ++  A + ++ AL LD   ++AL+ L+ +         +++ +E   RA  I   CA A
Sbjct: 201 KEIKLAIRCYESALVLDNICMDALINLSRIYWDIRTPQTVKRALELANRALMIDNKCAPA 260

Query: 271 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA----GL 326
              L         + +V +    A+   N    K + ++ L R  H K D+ KA     +
Sbjct: 261 AIVLCEAAMKCNNYKVVSEFANIAINYGNE-QEKIYGHFTLGRIAHQKQDFVKAKEEYNI 319

Query: 327 YYMASVKEINKPHEFIFP--YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGH 384
            Y++  K        +FP  +Y + QV  +  ++          L+    + + LK LG 
Sbjct: 320 GYLSDTK-------CMFPALHYRMAQVLFREKNYIQVEKILMNCLKYNGGDFDVLKLLGF 372

Query: 385 IYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGE 444
             ++L +I +  E L KA+ +   D    + +  LL       AL+ ++    +      
Sbjct: 373 TELKLNKINETIEYLEKAS-VFKIDYTIELIVSSLLEEKQPKKALEHYQRINEI------ 425

Query: 445 EVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKD 504
              +EVLNN+G  ++   E   + + F+ AL                 +D  + +     
Sbjct: 426 NSTVEVLNNMGCCYYFIQELIKSKECFEKALN----------------MDKGSEL----- 464

Query: 505 MQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLR 564
                              + T+LFN  R+LE++     A+  Y+ I+ +   Y DA +R
Sbjct: 465 -------------------RTTLLFNKGRVLEEMKLWDEANKCYQEIIKENPWYFDARIR 505

Query: 565 LAAIAKARNNLQL-SIELVNEALKVNGKYPN---ALSMLGDLELKNDDWVKAKETFRAAS 620
                       L S ELV   +     +PN   A  +LG++  +      A + F + +
Sbjct: 506 RCYHLWDEKQYNLASQELVETII----NFPNCEDAKLLLGEMLCQQGKIDDAFKIFNSVT 561

Query: 621 DATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANG 680
           +  +  + YA L+L         +  ++ PK     LE  K LY +++    +N+ A  G
Sbjct: 562 NH-NRTNLYAFLALAR----VMAKYGRQDPK---QQLEAVK-LYGKILNADPTNVLALGG 612

Query: 681 AGVVLAEKGQ-------FDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALA 733
             +  AE+ +       F+V  +   +V +           +V  ++   Y+   N  +A
Sbjct: 613 LALTTAERKENSSNPIPFNVIIESLQRVNDVCPSY------EVMFSMGTCYYNAHNIQMA 666

Query: 734 MKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPS-----NYTLRF 788
             ++++ L +  Y    ++L  LA+  +   ++++  + L RA+ + P      NY L  
Sbjct: 667 KSIFESTLNQ--YGEQVEVLNGLAQCEFMLNRYKEALEHLERALKIEPVSQIVYNYQLVA 724

Query: 789 DAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGFDEKKINTH 848
              +  QK      QK +   +E             V  +L   +NL        K+ T 
Sbjct: 725 SCYLEEQK------QKKKLYKEENEQLRQ------NVIGYLQQFNNLKY------KMKTF 766

Query: 849 VEYCKHLLDAAKIHREAAER-----EEQQNRQ-RQEAARQAALAEEARRKAEEQKKYLLE 902
            E  K L++ A+  +E  +R     EEQ+ R+  +E  R+    E+ +++  E+KK ++E
Sbjct: 767 EENWKSLIEQARKDQEEKQRLIKEHEEQRKRKIEEENQRKKEEEEKEQQRRMEEKKMIIE 826

Query: 903 KRKLEDE------QKRLRQQEEH 919
           K K E E      ++RL+  EE+
Sbjct: 827 KTKKEQEMIGKRIEERLKDVEEN 849



 Score = 43.1 bits (100), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 56/133 (42%), Gaps = 8/133 (6%)

Query: 146 QASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDS---LEFYKRALQ-VHPSCPG-AIR 200
           +A   +  +L AD  NV AL G A     R   S +         +LQ V+  CP   + 
Sbjct: 591 EAVKLYGKILNADPTNVLALGGLALTTAERKENSSNPIPFNVIIESLQRVNDVCPSYEVM 650

Query: 201 LGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRA 260
             +G C Y    +  A+  F+  L    E VE L  LA  +   N     ++ +E ++RA
Sbjct: 651 FSMGTCYYNAHNIQMAKSIFESTLNQYGEQVEVLNGLAQCEFMLNR---YKEALEHLERA 707

Query: 261 FEIYPYCAMALNY 273
            +I P   +  NY
Sbjct: 708 LKIEPVSQIVYNY 720


>gi|451981544|ref|ZP_21929896.1| hypothetical protein NITGR_590036 [Nitrospina gracilis 3/211]
 gi|451761217|emb|CCQ91160.1| hypothetical protein NITGR_590036 [Nitrospina gracilis 3/211]
          Length = 660

 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 109/424 (25%), Positives = 176/424 (41%), Gaps = 65/424 (15%)

Query: 89  LGVYYTYLGKIETKQREKEEHFIL-----------------------ATQYYNKASRIDM 125
           LG  Y +LG+ E  ++E +E   L                       A    NKA  ID 
Sbjct: 196 LGNLYHHLGRYEEAEQEFQESLFLDPKLEAAHVSLGNLYVDTDRLNDAEDAINKALSIDS 255

Query: 126 HEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPAL--LGQACVEFNRGRYSDSLE 183
           +          +    G  EQA   ++  L  + DN      LG +     R  Y +++E
Sbjct: 256 NSVDARHSLALIHFQSGLFEQAEKEWRACLRREPDNASFYNNLGNSLSSMER--YEEAIE 313

Query: 184 FYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQ 243
            Y++A  + P  P  +   +GL    L +  +A   +  AL+L+P+++ ALV +A  +L 
Sbjct: 314 TYQKAFALEPDNPLPL-FNLGLVYEDLDRFQEAEDNYLHALRLNPQHLSALVNIA--NLY 370

Query: 244 ANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF----LVE------QLTET 293
           +N           + R+ E  PY   AL   + H      HF    ++E      Q  + 
Sbjct: 371 SN-----------LGRSEEAIPYLRQALELDSKH---AKAHFGMACILEDERKFLQAEQH 416

Query: 294 ALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQL 353
              V +  P    ++  L   +   G+ E A L       E++ PHE +  Y+ LG    
Sbjct: 417 LCNVLDQEPDNQFAWRKLGSVHLESGNPE-AALRAFLKASELD-PHEPVH-YFYLGVTHQ 473

Query: 354 KLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAF 413
            L D RSA T + K L + PDN      LG +Y    +  +A+ LLR+A    P D  A 
Sbjct: 474 DLDDPRSAETAYLKALHLQPDNASVCNNLGLLYSHEERYAEAERLLREALLHAPEDINAL 533

Query: 414 IDLGELLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSF 471
            +LG  L+    G     F  A T+ ++A E  P   ++ NN+G+  F +   + A ++ 
Sbjct: 534 YNLG--LVLDRIG----RFDEAETVYRRALEVSPDDAQIWNNLGLARFARNRLQEAEEAL 587

Query: 472 KDAL 475
           K+A+
Sbjct: 588 KEAV 591



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 132/557 (23%), Positives = 214/557 (38%), Gaps = 75/557 (13%)

Query: 104 REKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRD--- 160
           R +++ +  A +YY  + ++D     T    G L   +   E+A   +   LE D D   
Sbjct: 64  RHRQQRYPEAEKYYRASLKLDTENSRTLNNLGSLYHDQERWEEAEREYLKALEIDPDYAL 123

Query: 161 --NVPALL---------GQACVE--------------------FNRGRYSDSLEFYKRAL 189
             N   LL          +A  E                    F+  +Y+ + + YK +L
Sbjct: 124 PHNNLGLLHARRQDFEGARAAFETAMRLDPEYDQAHYNLGNLYFDHQKYALAEKAYKESL 183

Query: 190 QVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAG 249
           +++P         +G   + LG+  +A Q FQ +L LDP+   A V+L  + +  +    
Sbjct: 184 RLNPDS-AFTHHELGNLYHHLGRYEEAEQEFQESLFLDPKLEAAHVSLGNLYVDTDR--- 239

Query: 250 IRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYY 309
           +    + + +A  I      A + LA   F +G   L EQ  +   A     P  +  Y 
Sbjct: 240 LNDAEDAINKALSIDSNSVDARHSLALIHFQSG---LFEQAEKEWRACLRREPDNASFYN 296

Query: 310 NLARSYHSKGDYEKA-GLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKV 368
           NL  S  S   YE+A   Y  A   E + P     P + LG V   L  F+ A  N+   
Sbjct: 297 NLGNSLSSMERYEEAIETYQKAFALEPDNP----LPLFNLGLVYEDLDRFQEAEDNYLHA 352

Query: 369 LEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAA 428
           L + P +   L  + ++Y  LG+ E+A   LR+A ++D + A+A    G   I  D    
Sbjct: 353 LRLNPQHLSALVNIANLYSNLGRSEEAIPYLRQALELDSKHAKAHF--GMACILEDERKF 410

Query: 429 LDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDA-----------LGD 477
           L A +    +L +  +         +G +H E G  E+A ++F  A              
Sbjct: 411 LQAEQHLCNVLDQEPDNQ--FAWRKLGSVHLESGNPEAALRAFLKASELDPHEPVHYFYL 468

Query: 478 GIWLTLLDSKTKTYVIDASASMLQ------FKDMQLFHRFENDGNHVELPWNK------- 524
           G+    LD           A  LQ        ++ L +  E      E    +       
Sbjct: 469 GVTHQDLDDPRSAETAYLKALHLQPDNASVCNNLGLLYSHEERYAEAERLLREALLHAPE 528

Query: 525 -VTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVN 583
            +  L+NL  +L++I     A  +YR  L    D    +  L     ARN LQ + E + 
Sbjct: 529 DINALYNLGLVLDRIGRFDEAETVYRRALEVSPDDAQIWNNLGLARFARNRLQEAEEALK 588

Query: 584 EALKVNGKYPNALSMLG 600
           EA++ +  YP A   LG
Sbjct: 589 EAVQRDPTYPLAHFNLG 605



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 139/690 (20%), Positives = 274/690 (39%), Gaps = 107/690 (15%)

Query: 166 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 225
           LG   VE NR  Y ++   Y +AL     C  A+ LG+G+ R++  +  +A + ++ +L+
Sbjct: 26  LGDYYVELNR--YEEAEAHYNQALGYDADCAEAL-LGLGIVRHRQQRYPEAEKYYRASLK 82

Query: 226 LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 285
           LD EN   L  L  +    ++     +   +  +A EI P  A+  N             
Sbjct: 83  LDTENSRTLNNLGSL---YHDQERWEEAEREYLKALEIDPDYALPHN------------- 126

Query: 286 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 345
                                   NL   +  + D+E A   +  +++      E+   +
Sbjct: 127 ------------------------NLGLLHARRQDFEGARAAFETAMR---LDPEYDQAH 159

Query: 346 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKI 405
           Y LG +      +  A   +++ L + PD+  T   LG++Y  LG+ E+A++  +++  +
Sbjct: 160 YNLGNLYFDHQKYALAEKAYKESLRLNPDSAFTHHELGNLYHHLGRYEEAEQEFQESLFL 219

Query: 406 DPRDAQAFIDLGELLISSDT-GAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEF 464
           DP+   A + LG L + +D    A DA   A ++   +     ++  +++ +IHF+ G F
Sbjct: 220 DPKLEAAHVSLGNLYVDTDRLNDAEDAINKALSIDSNS-----VDARHSLALIHFQSGLF 274

Query: 465 ESAHQ-------------SFKDALGDGI-----WLTLLDSKTKTYVIDASASM------L 500
           E A +             SF + LG+ +     +   +++  K + ++    +      L
Sbjct: 275 EQAEKEWRACLRREPDNASFYNNLGNSLSSMERYEEAIETYQKAFALEPDNPLPLFNLGL 334

Query: 501 QFKDMQLFHRFENDGNH-VELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYV 559
            ++D+  F   E++  H + L    ++ L N+A L   +  +  A    R  L     + 
Sbjct: 335 VYEDLDRFQEAEDNYLHALRLNPQHLSALVNIANLYSNLGRSEEAIPYLRQALELDSKHA 394

Query: 560 DAYLRLAAIAK-ARNNLQLSIELVNEALKVNGKYPN---ALSMLGDLELKNDDWVKAKET 615
            A+  +A I +  R  LQ    L N    V  + P+   A   LG + L++ +   A   
Sbjct: 395 KAHFGMACILEDERKFLQAEQHLCN----VLDQEPDNQFAWRKLGSVHLESGNPEAALRA 450

Query: 616 FRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNL 675
           F  AS+     D +  +   ++ Y      +   P+        A+  Y + +     N 
Sbjct: 451 FLKASEL----DPHEPV---HYFYLGVTHQDLDDPR-------SAETAYLKALHLQPDNA 496

Query: 676 YAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMK 735
              N  G++ + + ++  ++ L  +    A   +     +   NL  V    G F  A  
Sbjct: 497 SVCNNLGLLYSHEERYAEAERLLREALLHAPEDI-----NALYNLGLVLDRIGRFDEAET 551

Query: 736 MYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQ 795
           +Y+  L       DAQI   L    +   + Q+ +++L  A+   P+     F+ G+  +
Sbjct: 552 VYRRALE--VSPDDAQIWNNLGLARFARNRLQEAEEALKEAVQRDPTYPLAHFNLGLVYE 609

Query: 796 -KFSASTLQKTRRTADEVRSTVAELENAVR 824
            +      +   + A  +  T+AE    V+
Sbjct: 610 ARMKNQEAENEFQEATRLDPTLAETRTLVQ 639



 Score = 66.6 bits (161), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 77/360 (21%), Positives = 154/360 (42%), Gaps = 26/360 (7%)

Query: 122 RIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDS 181
           R +  +P      G   +     E+A + +   L  D D   ALLG   V   + RY ++
Sbjct: 14  RQNPGDPDPHCDLGDYYVELNRYEEAEAHYNQALGYDADCAEALLGLGIVRHRQQRYPEA 73

Query: 182 LEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMD 241
            ++Y+ +L++       +   +G   +   +  +A + + +AL++DP+       L ++ 
Sbjct: 74  EKYYRASLKLDTENSRTLN-NLGSLYHDQERWEEAEREYLKALEIDPDYALPHNNLGLLH 132

Query: 242 LQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG 301
            +  +  G R   E   R   + P    A   L N +F   ++ L E+  + +L +    
Sbjct: 133 ARRQDFEGARAAFETAMR---LDPEYDQAHYNLGNLYFDHQKYALAEKAYKESLRLN--- 186

Query: 302 PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFP-----YYGLGQVQLKLG 356
           P  + +++ L   YH  G YE+A   +  S+        F+ P     +  LG + +   
Sbjct: 187 PDSAFTHHELGNLYHHLGRYEEAEQEFQESL--------FLDPKLEAAHVSLGNLYVDTD 238

Query: 357 DFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDL 416
               A     K L I  ++ +   +L  I+ Q G  E+A++  R   + +P +A  + +L
Sbjct: 239 RLNDAEDAINKALSIDSNSVDARHSLALIHFQSGLFEQAEKEWRACLRREPDNASFYNNL 298

Query: 417 GELLISSDT-GAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
           G  L S +    A++ ++ A  L  +    +P   L N+G+++ +   F+ A  ++  AL
Sbjct: 299 GNSLSSMERYEEAIETYQKAFAL--EPDNPLP---LFNLGLVYEDLDRFQEAEDNYLHAL 353



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 77/331 (23%), Positives = 140/331 (42%), Gaps = 24/331 (7%)

Query: 92  YYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAF 151
           +Y  LG   +     EE    A + Y KA  ++   P      G +       ++A   +
Sbjct: 294 FYNNLGNSLSSMERYEE----AIETYQKAFALEPDNPLPLFNLGLVYEDLDRFQEAEDNY 349

Query: 152 KIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLG 211
              L  +  ++ AL+  A +  N GR  +++ + ++AL++  S       G+        
Sbjct: 350 LHALRLNPQHLSALVNIANLYSNLGRSEEAIPYLRQALELD-SKHAKAHFGMACILEDER 408

Query: 212 QLGKARQAFQRALQLDPENVEALVALAVMDLQA-NEAAGIRKGMEKMQRAFEIYPYCAMA 270
           +  +A Q     L  +P+N  A   L  + L++ N  A +R  +    +A E+ P+  + 
Sbjct: 409 KFLQAEQHLCNVLDQEPDNQFAWRKLGSVHLESGNPEAALRAFL----KASELDPHEPV- 463

Query: 271 LNYLANHFFFTG---QHFLVEQLTETA-LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGL 326
                 H+F+ G   Q     +  ETA L   +  P  +    NL   Y  +  Y +A  
Sbjct: 464 ------HYFYLGVTHQDLDDPRSAETAYLKALHLQPDNASVCNNLGLLYSHEERYAEAER 517

Query: 327 YYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIY 386
               ++  ++ P E I   Y LG V  ++G F  A T + + LE+ PD+ +    LG   
Sbjct: 518 LLREAL--LHAP-EDINALYNLGLVLDRIGRFDEAETVYRRALEVSPDDAQIWNNLGLAR 574

Query: 387 VQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 417
               ++++A+E L++A + DP    A  +LG
Sbjct: 575 FARNRLQEAEEALKEAVQRDPTYPLAHFNLG 605


>gi|167392599|ref|XP_001740219.1| tetratricopeptide repeat protein [Entamoeba dispar SAW760]
 gi|165895764|gb|EDR23380.1| tetratricopeptide repeat protein, putative [Entamoeba dispar
           SAW760]
          Length = 921

 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 170/788 (21%), Positives = 330/788 (41%), Gaps = 99/788 (12%)

Query: 151 FKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 210
           FK  LE +++  PAL+G A  E    +   +L ++ +AL+  P+   +IR GIG   Y  
Sbjct: 142 FKRALELNKNYAPALIGLALCELKDHKDGVALSYFIQALKKQPT-NVSIRCGIGRIYYSQ 200

Query: 211 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 270
            ++  A + ++ AL LD   ++AL+ L+ +         +++ +E   RA  I   CA A
Sbjct: 201 KEIKLAIRCYESALVLDTICIDALINLSRIYWDIRTPQTVKRALELANRALMIDNKCAPA 260

Query: 271 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 330
              L         + +  +    A+   N    K + ++ L R  H K D+ KA   Y  
Sbjct: 261 AIVLCEAAMKCNNYKVASEFANIAINYGNEQ-EKIYGHFTLGRIAHQKQDFIKAKEEYNI 319

Query: 331 SVKEINKPHEFIFP--YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQ 388
           +    NK     FP  +Y + QV  +  ++          L+    + + LK LG   ++
Sbjct: 320 AYLSDNK---CTFPALHYRMAQVLFREKNYIQVEKILMNCLKYNGGDFDVLKLLGFTELK 376

Query: 389 LGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPI 448
           L +I +  E L KA+ +   D +  + +  LL       AL+ ++    +         +
Sbjct: 377 LNKINETIEYLEKAS-VFKIDYKIELIVSSLLEEKQPKKALEHYQRINEV------NSTV 429

Query: 449 EVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLF 508
           EVLNN+G  ++   E   + + F+ AL                 +D  + +         
Sbjct: 430 EVLNNMGCCYYFIQELVKSKECFEKALN----------------MDKGSEL--------- 464

Query: 509 HRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAI 568
                          + T+LFN  R+LE++     A+  Y+ I+     Y DA +R    
Sbjct: 465 ---------------RTTLLFNKGRVLEEMKLWDEANKCYQEIIKDNPWYFDARIRRCYH 509

Query: 569 AKARNNLQLSIELVNEALKVNGKYPN---ALSMLGDLELKNDDWVKAKETFRAASDATDG 625
                   L+ + + E +     +PN   A  +LG++  +      A + F + + + + 
Sbjct: 510 LWDEKQYNLASQELVETI---NNFPNCEDAKLLLGEMLCQQGKIDDAFKIFNSVT-SHNR 565

Query: 626 KDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVL 685
            + YA L+L         +  ++ PK     LE  K LY +++    +N+ A  G  +  
Sbjct: 566 TNLYAFLALAR----VMAKYGRQDPK---QQLEAVK-LYGKILNADPTNVLALGGLALTT 617

Query: 686 AEKGQFDVSKDLFTQVQEAASGSVFVQMP--DVWINLAHVYFAQGNFALAMKMYQNCLRK 743
           AE+ +   +   F  + E+    V    P  +V  ++   Y+   N  +A   +++ L +
Sbjct: 618 AERKETTSNPIPFNVIIESLQ-RVNDVCPSYEVMFSMGTCYYNARNIPMAKSTFESTLNQ 676

Query: 744 FYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQ 803
             Y    ++L  LA+  +   ++++  + L RA+ + P +  +        Q  ++  L+
Sbjct: 677 --YGEQVEVLNGLAQCEFMLNRYKEALEHLERALKIEPVSQIV-----YNYQLVASCYLE 729

Query: 804 KTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHR 863
           + ++     +    +L  +  V  +L   +NL        K+ T  E  K L++ A+  +
Sbjct: 730 EQKQKKKLYKEENEQLRQS--VVGYLQQFNNLKY------KMKTFEENWKSLIEQARKDQ 781

Query: 864 EAAER-----EEQQNRQ-RQEAARQAALAEEARRKAEEQKKYLLEKRKLEDE------QK 911
           E  +R     EEQ+ ++  +E  R+    E+ +++  E+KK ++EK K E E      ++
Sbjct: 782 EEKQRLIKEHEEQRKKKIEEENQRKKEEEEKEQQRKMEEKKMIIEKTKKEQEMIGKRIEE 841

Query: 912 RLRQQEEH 919
           RL+  EE+
Sbjct: 842 RLKDIEEN 849



 Score = 43.1 bits (100), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 58/133 (43%), Gaps = 8/133 (6%)

Query: 146 QASSAFKIVLEADRDNVPALLGQACVEFNRGRY-SDSLEF--YKRALQ-VHPSCPG-AIR 200
           +A   +  +L AD  NV AL G A     R    S+ + F     +LQ V+  CP   + 
Sbjct: 591 EAVKLYGKILNADPTNVLALGGLALTTAERKETTSNPIPFNVIIESLQRVNDVCPSYEVM 650

Query: 201 LGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRA 260
             +G C Y    +  A+  F+  L    E VE L  LA  +   N     ++ +E ++RA
Sbjct: 651 FSMGTCYYNARNIPMAKSTFESTLNQYGEQVEVLNGLAQCEFMLNR---YKEALEHLERA 707

Query: 261 FEIYPYCAMALNY 273
            +I P   +  NY
Sbjct: 708 LKIEPVSQIVYNY 720


>gi|359409222|ref|ZP_09201690.1| Flp pilus assembly protein TadD [SAR116 cluster alpha
           proteobacterium HIMB100]
 gi|356675975|gb|EHI48328.1| Flp pilus assembly protein TadD [SAR116 cluster alpha
           proteobacterium HIMB100]
          Length = 727

 Score = 93.2 bits (230), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 93/355 (26%), Positives = 147/355 (41%), Gaps = 32/355 (9%)

Query: 130 TWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRAL 189
           TW   G + L  G    A SAFK  L+ +  +       A  E+  G    +L F+K A 
Sbjct: 54  TWNFLGDVSLTLGNSTDALSAFKTALKLNPSDARVNKNLAITEYMLGNNEKALNFFKIAS 113

Query: 190 QVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAG 249
            + P  P      IG     LG +  A  A++  + L+P++ EA   L    L   E   
Sbjct: 114 SLSPKDPDN-HFNIGNILRDLGDINGAISAYKHCIALNPKDSEAYNNLGTALLSDGE--- 169

Query: 250 IRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYY 309
           I K +   ++A ++ P    A N L   F +  +    E+    AL +    P   +S +
Sbjct: 170 INKAIIAYEKAIQLVPSDPNAHNNLGLCFHYQKRFKEAEEKYNEALRLN---PKSINSLF 226

Query: 310 NLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVL 369
           NL   Y  K ++ +A  Y+  +++     H     +  LG    ++GD   A+  ++  +
Sbjct: 227 NLGNVYLEKKNFLRAIQYFGQTIQIDPNAHN---AFNNLGLCLAQIGDNTKAIQAYKNSI 283

Query: 370 EIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSD-TGAA 428
            I P+N      LG+ Y  + + EKA E  +    IDP +A    DLG LL  +D    A
Sbjct: 284 SINPNNSNVHFNLGNAYRDVNRNEKAIESYKNGLAIDPLNAVYLNDLGILLAENDRVDEA 343

Query: 429 LDAFKT--------ARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
           L A++         ART L             NIG ++    E E+A  ++  AL
Sbjct: 344 LSAYQASLDITGGDARTFL-------------NIGNLYKNNNEIENAISAYNKAL 385



 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 67/308 (21%), Positives = 131/308 (42%), Gaps = 10/308 (3%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
           A  ++  AS +   +P      G +L   G++  A SA+K  +  +  +  A        
Sbjct: 105 ALNFFKIASSLSPKDPDNHFNIGNILRDLGDINGAISAYKHCIALNPKDSEAYNNLGTAL 164

Query: 173 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 232
            + G  + ++  Y++A+Q+ PS P A    +GLC +   +  +A + +  AL+L+P+++ 
Sbjct: 165 LSDGEINKAIIAYEKAIQLVPSDPNAHN-NLGLCFHYQKRFKEAEEKYNEALRLNPKSIN 223

Query: 233 ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTE 292
           +L  L  + L   E     + ++   +  +I P    A N L       G +    Q  +
Sbjct: 224 SLFNLGNVYL---EKKNFLRAIQYFGQTIQIDPNAHNAFNNLGLCLAQIGDNTKAIQAYK 280

Query: 293 TALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQ 352
            ++++    P  S+ ++NL  +Y      EKA   Y   +     P   ++    LG + 
Sbjct: 281 NSISI---NPNNSNVHFNLGNAYRDVNRNEKAIESYKNGLAI--DPLNAVY-LNDLGILL 334

Query: 353 LKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQA 412
            +      AL+ ++  L+I   +  T   +G++Y    +IE A     KA K+    A  
Sbjct: 335 AENDRVDEALSAYQASLDITGGDARTFLNIGNLYKNNNEIENAISAYNKALKLKMDYADV 394

Query: 413 FIDLGELL 420
           +  L  L+
Sbjct: 395 YKQLSSLI 402



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 75/323 (23%), Positives = 129/323 (39%), Gaps = 48/323 (14%)

Query: 348 LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 407
           LG V L LG+   AL+ F+  L++ P +    K L      LG  EKA    + A+ + P
Sbjct: 58  LGDVSLTLGNSTDALSAFKTALKLNPSDARVNKNLAITEYMLGNNEKALNFFKIASSLSP 117

Query: 408 RDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGE---------------------- 444
           +D     ++G +L    D   A+ A+K    L  K  E                      
Sbjct: 118 KDPDNHFNIGNILRDLGDINGAISAYKHCIALNPKDSEAYNNLGTALLSDGEINKAIIAY 177

Query: 445 EVPIEVL-------NNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASA 497
           E  I+++       NN+G+    +  F+ A + + +AL        L+ K+   + +   
Sbjct: 178 EKAIQLVPSDPNAHNNLGLCFHYQKRFKEAEEKYNEALR-------LNPKSINSLFNLGN 230

Query: 498 SMLQFKD----MQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILF 553
             L+ K+    +Q F      G  +++  N      NL   L QI D   A   Y+  + 
Sbjct: 231 VYLEKKNFLRAIQYF------GQTIQIDPNAHNAFNNLGLCLAQIGDNTKAIQAYKNSIS 284

Query: 554 KYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAK 613
              +  + +  L    +  N  + +IE     L ++      L+ LG L  +ND   +A 
Sbjct: 285 INPNNSNVHFNLGNAYRDVNRNEKAIESYKNGLAIDPLNAVYLNDLGILLAENDRVDEAL 344

Query: 614 ETFRAASDATDGKDSYATLSLGN 636
             ++A+ D T G D+   L++GN
Sbjct: 345 SAYQASLDITGG-DARTFLNIGN 366


>gi|340505437|gb|EGR31764.1| hypothetical protein IMG5_102640 [Ichthyophthirius multifiliis]
          Length = 1411

 Score = 93.2 bits (230), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 87/348 (25%), Positives = 162/348 (46%), Gaps = 28/348 (8%)

Query: 135  GQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQV-HP 193
            G L L K ++  AS  FK +L+ D  NV AL+  A     +G+Y  +++++K A+ +   
Sbjct: 1032 GMLYLKKKDIYNASEQFKKILQIDPKNVNALIEYATSLSLQGQYDKAVQYFKEAVSLDQE 1091

Query: 194  SCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKG 253
            +  G +RLG  + + KL  L  A + +++ +Q+ PE  +A   L +  ++  E    +K 
Sbjct: 1092 NIVGNLRLG-KIFQNKLNDLDGAIECYKKIIQVQPEFSKAHYQLGLAYIEKKEY---KKA 1147

Query: 254  MEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLAR 313
             E++++  +I P  + A   +   F+      +  +  + AL      PT       LA 
Sbjct: 1148 SEELKQTLKINPRFSGAFKAMGLIFYRNANEQIACKYYQKALEC---DPTDMECKVGLAN 1204

Query: 314  SYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYP 373
             Y+   +++ A  YY   +  I++  E     Y LG      G+   A+++++  ++I P
Sbjct: 1205 CYYLLENFDLAIQYY-EEISNIDQNEEI---EYNLGNCYYMKGEIDEAISHYKNSIDIKP 1260

Query: 374  DNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFK 433
            D  + L  LG+ +  +   EKA E  +K   I+P ++ A  +L      ++T   L   +
Sbjct: 1261 DKTDCLYNLGNAFCIVQNFEKALECFQKTVDIEPHNSSAIYNL------ANTYYILGEHE 1314

Query: 434  TARTLLKKAGEEVPIEVLNN------IGVIHFEKGEFESAHQSFKDAL 475
             A    +KA +  P    NN      IG + FE+G FE A + ++  +
Sbjct: 1315 LAFIQFEKALDLEP----NNEEWQGYIGGLFFERGNFEKAKKHYEKCV 1358



 Score = 64.7 bits (156), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 86/343 (25%), Positives = 141/343 (41%), Gaps = 44/343 (12%)

Query: 113  ATQYYNKASRIDMHEPSTWV--GKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQAC 170
            A QY  K  +I+    S  V  G G++   +   EQA   FKIV +        LL  A 
Sbjct: 833  AKQYLLKVFQINKQFKSDKVNMGLGEIFELEKNYEQALYHFKIVYKTTDQQQLILLKIAK 892

Query: 171  VEFNRGRYSDSLEFYKRALQVHPS--CPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDP 228
              +  G  S + + Y+ A++V+     P    L +G  + K G +       Q+A  L P
Sbjct: 893  CFYKIGNISHAQKTYEEAIKVNTKNFLP---YLKLGWMQIKNGDIKLGINNLQKAQSLQP 949

Query: 229  ENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEI------------------------- 263
            +N E  V L    L  N   GI   +  + +A  I                         
Sbjct: 950  DNFEITVKLGKAYLLLNNEDGIDDAIFHLTKALSIDENDYDCLIGLGKAYEKKGDIDKSI 1009

Query: 264  -YPYCAMAL-NYLAN--HFFFTGQHFL----VEQLTETALAVTNHGPTKSHSYYNLARSY 315
             +   A++L N L N     F G  +L    +   +E    +    P   ++    A S 
Sbjct: 1010 QFTQVAISLPNSLPNINSILFLGMLYLKKKDIYNASEQFKKILQIDPKNVNALIEYATSL 1069

Query: 316  HSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQV-QLKLGDFRSALTNFEKVLEIYPD 374
              +G Y+KA  Y+  +V   +   E I     LG++ Q KL D   A+  ++K++++ P+
Sbjct: 1070 SLQGQYDKAVQYFKEAV---SLDQENIVGNLRLGKIFQNKLNDLDGAIECYKKIIQVQPE 1126

Query: 375  NCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 417
              +    LG  Y++  + +KA E L++  KI+PR + AF  +G
Sbjct: 1127 FSKAHYQLGLAYIEKKEYKKASEELKQTLKINPRFSGAFKAMG 1169



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 41/128 (32%), Positives = 64/128 (50%), Gaps = 8/128 (6%)

Query: 108  EHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPAL-- 165
            E+F LA QYY + S ID +E   +   G     KGE+++A S +K  ++   D    L  
Sbjct: 1210 ENFDLAIQYYEEISNIDQNEEIEY-NLGNCYYMKGEIDEAISHYKNSIDIKPDKTDCLYN 1268

Query: 166  LGQA-CVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRAL 224
            LG A C+  N   +  +LE +++ + + P    AI   +    Y LG+   A   F++AL
Sbjct: 1269 LGNAFCIVQN---FEKALECFQKTVDIEPHNSSAI-YNLANTYYILGEHELAFIQFEKAL 1324

Query: 225  QLDPENVE 232
             L+P N E
Sbjct: 1325 DLEPNNEE 1332


>gi|343960142|dbj|BAK63925.1| RNA polymerase-associated protein CTR9 homolog [Pan troglodytes]
          Length = 471

 Score = 93.2 bits (230), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 64/178 (35%), Positives = 102/178 (57%), Gaps = 11/178 (6%)

Query: 736 MYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQ 795
           MY+NCLRKFY + + +++LYLAR  ++  + Q+CK++LL+A H+APS+  L F+  + +Q
Sbjct: 1   MYENCLRKFYKHQNTEVVLYLARALFKCGKLQECKQTLLKARHVAPSDTVLMFNVALVLQ 60

Query: 796 KFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHL 855
           + + S L+  +    EV + V ELE A R FS+LS   +     FD     T    C  L
Sbjct: 61  RLATSVLKDEKSNLKEVLNAVKELELAHRYFSYLSKVGDKMR--FDLALAATEARQCSDL 118

Query: 856 LDAAKIHREAAEREEQQNR-------QRQEAARQAALAEE--ARRKAEEQKKYLLEKR 904
           L  A+ H   A +++++ R       Q +E  RQ  L E+   R + +E++K LLE+R
Sbjct: 119 LSQAQYHVARARKQDEEERELRAKQEQEKELLRQKLLKEQEEKRLREKEEQKKLLEQR 176


>gi|124022005|ref|YP_001016312.1| hypothetical protein P9303_02941 [Prochlorococcus marinus str. MIT
            9303]
 gi|123962291|gb|ABM77047.1| Hypothetical protein P9303_02941 [Prochlorococcus marinus str. MIT
            9303]
          Length = 1676

 Score = 92.8 bits (229), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 162/727 (22%), Positives = 281/727 (38%), Gaps = 74/727 (10%)

Query: 119  KASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRY 178
            K+  +    P T +  G +    G ++QA ++    LE   DN  A +    +  + G  
Sbjct: 432  KSLELKPDNPDTLINLGGIYKDLGNLDQALASTLKSLELKPDNPTAHMNLGGIYKDLGNL 491

Query: 179  SDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA 238
              +L    ++L++ P  P A  + +G     LG L +A  +  ++L+L P+N + L+ L 
Sbjct: 492  DQALASTLKSLELKPDNPTA-HMNLGGIYQDLGNLDQALASTLKSLELQPDNPDTLINLG 550

Query: 239  VMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVT 298
             +     +   + + +    ++ E+ P     L  L   +   G    ++Q   + L   
Sbjct: 551  GI---YKDLGNLDQALASTLKSLELKPDNPDTLINLGGIYKDLGN---LDQALASTLKSL 604

Query: 299  NHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK-EINKPHEFIFPYYGLGQVQLKLGD 357
               P    ++ NL   Y   G+ ++A    + S++ + + P   I     LG +   LG+
Sbjct: 605  ELKPDNPTAHMNLGGIYQDLGNLDQALASTLKSLELKPDNPDTLI----NLGGIYKDLGN 660

Query: 358  FRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 417
               AL +  K LE+ PDN +TL  LG IY  LG +++A     K+ ++ P +  A I+LG
Sbjct: 661  LDQALASTLKSLELKPDNPDTLINLGGIYKDLGNLDQALASTLKSLELKPDNPTALINLG 720

Query: 418  ELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGD 477
               I  D G    A  +    L+   +    ++  N+G I+ + G  + A  S   +L  
Sbjct: 721  G--IYQDLGNLDQALASTLKSLELKPDNPTAQM--NLGGIYKDLGNLDQALASTLKSLE- 775

Query: 478  GIWLTLLDSKTKTYVIDASASMLQFKDM-QLFHRFENDGNHVELPWNKVTVLFNLARLLE 536
                  L     T  ++       +KD+  L     +    +EL  +  T   NL  + +
Sbjct: 776  ------LKPDNPTAHMNLGGI---YKDLGNLDQALASTLKSLELKPDNPTAHMNLGGIYK 826

Query: 537  QIH--DTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPN 594
             +   D   AS L  L L    D  D  + L  I K   NL  ++    ++L++    P+
Sbjct: 827  DLGNLDQALASTLKSLEL--KPDNPDTLINLGGIYKDLGNLDQALASTLKSLELKPDNPD 884

Query: 595  ALSMLGDL--ELKNDDWVKAKETFRAASDATDGKDSYATLS-----LGNWN--YFAALRN 645
             L  LG +  +L N D   A  T ++     D  D+   L      LGN +    + L++
Sbjct: 885  TLINLGGIYKDLGNLDQALA-STLKSLELKPDNPDTLINLGGIYKDLGNLDQALASTLKS 943

Query: 646  EKRAPKLEAT------------HLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDV 693
             +  P    T            +L++A     + +     N  A    G +  + G  D 
Sbjct: 944  LELKPDNPDTLINLGGIYKDLDNLDQALASTLKSLELKPDNPTAHMNLGGIYKDLGNLD- 1002

Query: 694  SKDLFTQVQEAASGSVFVQM----PDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTD 749
                    Q  AS    +++    PD  INL  +Y   GN   A+      L     N D
Sbjct: 1003 --------QALASTLKSLELKPDNPDTLINLGGIYKDLGNLDQALASTLKSLELKPDNPD 1054

Query: 750  AQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFS------ASTLQ 803
               L+ L   + +         S L+++ L P N     + G   Q         ASTL+
Sbjct: 1055 T--LINLGGIYKDLGNLDQALASTLKSLELKPDNPDTLINLGGIYQDLGNLDQALASTLK 1112

Query: 804  KTRRTAD 810
                  D
Sbjct: 1113 SLELQPD 1119



 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 154/661 (23%), Positives = 262/661 (39%), Gaps = 66/661 (9%)

Query: 142 GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 201
           G ++QA ++    LE   DN  A +    +  + G    +L    ++L++ P  P A  +
Sbjct: 149 GNLDQALASTLKSLELQPDNPTAHMNLGGIYKDLGNLDQALASTLKSLELQPDNPTA-HM 207

Query: 202 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 261
            +G     LG L +A  +  ++L+L P+N  AL+ L  +     +   + + +    ++ 
Sbjct: 208 NLGGIYKDLGNLDQALASTLKSLELQPDNPTALINLGGI---YKDLGNLDQALASTLKSL 264

Query: 262 EIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDY 321
           E+ P    A   L   +   G    ++Q   + L      P    ++ NL   Y   G+ 
Sbjct: 265 ELQPDNPTAHMNLGGIYQDLGN---LDQALASTLKSLELKPDNPTAHMNLGGIYQDLGNL 321

Query: 322 EKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKA 381
           ++A     +++K +    +    +  LG +   LG+   AL +  K LE+ PDN +TL  
Sbjct: 322 DQA---LASTLKSLELKPDNPTAHMNLGGIYQDLGNLDQALASTLKSLELKPDNPDTLIN 378

Query: 382 LGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKK 441
           LG IY  LG +++A     K+ ++ P +  A ++LG   I  D    LD    A     K
Sbjct: 379 LGGIYKDLGNLDQALASTLKSLELKPDNPTAHMNLGG--IYQD----LDNLDQALASTLK 432

Query: 442 AGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASM 499
           + E  P   + L N+G I+ + G  + A  S   +L        L     T  ++     
Sbjct: 433 SLELKPDNPDTLINLGGIYKDLGNLDQALASTLKSLE-------LKPDNPTAHMNLGGI- 484

Query: 500 LQFKDM-QLFHRFENDGNHVELPWNKVTVLFNLARLLEQIH--DTVAASVLYRLILFKYQ 556
             +KD+  L     +    +EL  +  T   NL  + + +   D   AS L  L L    
Sbjct: 485 --YKDLGNLDQALASTLKSLELKPDNPTAHMNLGGIYQDLGNLDQALASTLKSLEL--QP 540

Query: 557 DYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDL--ELKNDDWVKAKE 614
           D  D  + L  I K   NL  ++    ++L++    P+ L  LG +  +L N D   A  
Sbjct: 541 DNPDTLINLGGIYKDLGNLDQALASTLKSLELKPDNPDTLINLGGIYKDLGNLDQALA-S 599

Query: 615 TFRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSN 674
           T ++     D  +  A ++LG    +  L N  +A       LE   +    +I      
Sbjct: 600 TLKSLELKPD--NPTAHMNLG--GIYQDLGNLDQALASTLKSLELKPDNPDTLI------ 649

Query: 675 LYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQM----PDVWINLAHVYFAQGNF 730
               N  G+           KDL    Q  AS    +++    PD  INL  +Y   GN 
Sbjct: 650 ----NLGGIY----------KDLGNLDQALASTLKSLELKPDNPDTLINLGGIYKDLGNL 695

Query: 731 ALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDA 790
             A+      L     N  A  L+ L   + +         S L+++ L P N T + + 
Sbjct: 696 DQALASTLKSLELKPDNPTA--LINLGGIYQDLGNLDQALASTLKSLELKPDNPTAQMNL 753

Query: 791 G 791
           G
Sbjct: 754 G 754



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 74/307 (24%), Positives = 133/307 (43%), Gaps = 26/307 (8%)

Query: 119  KASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRY 178
            K+  +    P T +  G +    G ++QA ++    LE   DN   L+    +  + G  
Sbjct: 840  KSLELKPDNPDTLINLGGIYKDLGNLDQALASTLKSLELKPDNPDTLINLGGIYKDLGNL 899

Query: 179  SDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA 238
              +L    ++L++ P  P  + + +G     LG L +A  +  ++L+L P+N + L+ L 
Sbjct: 900  DQALASTLKSLELKPDNPDTL-INLGGIYKDLGNLDQALASTLKSLELKPDNPDTLINLG 958

Query: 239  VMDLQANEAAGIRKGMEKMQRAF-------EIYPYCAMALNYLANHFFFTGQHFLVEQLT 291
                      GI K ++ + +A        E+ P    A   L   +   G    ++Q  
Sbjct: 959  ----------GIYKDLDNLDQALASTLKSLELKPDNPTAHMNLGGIYKDLGN---LDQAL 1005

Query: 292  ETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK-EINKPHEFIFPYYGLGQ 350
             + L      P    +  NL   Y   G+ ++A    + S++ + + P   I     LG 
Sbjct: 1006 ASTLKSLELKPDNPDTLINLGGIYKDLGNLDQALASTLKSLELKPDNPDTLI----NLGG 1061

Query: 351  VQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDA 410
            +   LG+   AL +  K LE+ PDN +TL  LG IY  LG +++A     K+ ++ P + 
Sbjct: 1062 IYKDLGNLDQALASTLKSLELKPDNPDTLINLGGIYQDLGNLDQALASTLKSLELQPDNP 1121

Query: 411  QAFIDLG 417
             A ++LG
Sbjct: 1122 TAHMNLG 1128



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 160/675 (23%), Positives = 256/675 (37%), Gaps = 72/675 (10%)

Query: 176 GRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV 235
           GR+ D L+  ++ LQ  P  P   +   G     LGQ  KA+Q   +A QLD  + E + 
Sbjct: 13  GRHQDCLQACQQLLQSEPENPLPWKYA-GKSLLALGQPEKAQQCLAKAHQLDTTDPETIK 71

Query: 236 ALA-VMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETA 294
            +  + +   N+A  IR      + A  I    A A+N L       G  F  EQL + A
Sbjct: 72  DIGNIFNALQNDAEAIR----LYKAALLINQNYAPAINNLGLIAKRQGDLFAAEQLVKRA 127

Query: 295 LAVTNHGPTKSHSYY--NLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQ 352
             +      +S + Y  NL   Y   G+ ++A     +++K +    +    +  LG + 
Sbjct: 128 CDL-----DQSFAPYHMNLGGIYKDLGNLDQA---LASTLKSLELQPDNPTAHMNLGGIY 179

Query: 353 LKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQA 412
             LG+   AL +  K LE+ PDN      LG IY  LG +++A     K+ ++ P +  A
Sbjct: 180 KDLGNLDQALASTLKSLELQPDNPTAHMNLGGIYKDLGNLDQALASTLKSLELQPDNPTA 239

Query: 413 FIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFK 472
            I+LG   I  D G    A  +    L+   +     +  N+G I+ + G  + A  S  
Sbjct: 240 LINLGG--IYKDLGNLDQALASTLKSLELQPDNPTAHM--NLGGIYQDLGNLDQALASTL 295

Query: 473 DALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLA 532
            +L         D+ T    +      L   D  L    ++    +EL  +  T   NL 
Sbjct: 296 KSLE-----LKPDNPTAHMNLGGIYQDLGNLDQALASTLKS----LELKPDNPTAHMNLG 346

Query: 533 RLLEQIH--DTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNG 590
            + + +   D   AS L  L L    D  D  + L  I K   NL  ++    ++L++  
Sbjct: 347 GIYQDLGNLDQALASTLKSLEL--KPDNPDTLINLGGIYKDLGNLDQALASTLKSLELKP 404

Query: 591 KYPNALSMLGDL--ELKNDDWVKAKETFRAASDATDGKDSYATLS-----LGNWN--YFA 641
             P A   LG +  +L N D   A  T ++     D  D+   L      LGN +    +
Sbjct: 405 DNPTAHMNLGGIYQDLDNLDQALA-STLKSLELKPDNPDTLINLGGIYKDLGNLDQALAS 463

Query: 642 ALRNEKRAPKLEATH------------LEKAKELYTRVIVQHTSNLYAANGAGVVLAEKG 689
            L++ +  P     H            L++A     + +     N  A    G +  + G
Sbjct: 464 TLKSLELKPDNPTAHMNLGGIYKDLGNLDQALASTLKSLELKPDNPTAHMNLGGIYQDLG 523

Query: 690 QFDVSKDLFTQVQEAASGSVFVQM--PDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYN 747
             D       Q   +   S+ +Q   PD  INL  +Y   GN   A+      L     N
Sbjct: 524 NLD-------QALASTLKSLELQPDNPDTLINLGGIYKDLGNLDQALASTLKSLELKPDN 576

Query: 748 TDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFS------AST 801
            D   L+ L   + +         S L+++ L P N T   + G   Q         AST
Sbjct: 577 PDT--LINLGGIYKDLGNLDQALASTLKSLELKPDNPTAHMNLGGIYQDLGNLDQALAST 634

Query: 802 LQKTRRTADEVRSTV 816
           L+      D   + +
Sbjct: 635 LKSLELKPDNPDTLI 649



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 168/734 (22%), Positives = 282/734 (38%), Gaps = 76/734 (10%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
           A Q   KA ++D  +P T    G +  A     +A   +K  L  +++  PA+     + 
Sbjct: 52  AQQCLAKAHQLDTTDPETIKDIGNIFNALQNDAEAIRLYKAALLINQNYAPAINNLGLIA 111

Query: 173 FNRGRYSDSLEFYKRALQVHPS-CPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENV 231
             +G    + +  KRA  +  S  P  + LG G+ +  LG L +A  +  ++L+L P+N 
Sbjct: 112 KRQGDLFAAEQLVKRACDLDQSFAPYHMNLG-GIYK-DLGNLDQALASTLKSLELQPDNP 169

Query: 232 EALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLT 291
            A + L  +     +   + + +    ++ E+ P    A   L   +   G    ++Q  
Sbjct: 170 TAHMNLGGI---YKDLGNLDQALASTLKSLELQPDNPTAHMNLGGIYKDLGN---LDQAL 223

Query: 292 ETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQV 351
            + L      P    +  NL   Y   G+ ++A     +++K +    +    +  LG +
Sbjct: 224 ASTLKSLELQPDNPTALINLGGIYKDLGNLDQA---LASTLKSLELQPDNPTAHMNLGGI 280

Query: 352 QLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQ 411
              LG+   AL +  K LE+ PDN      LG IY  LG +++A     K+ ++ P +  
Sbjct: 281 YQDLGNLDQALASTLKSLELKPDNPTAHMNLGGIYQDLGNLDQALASTLKSLELKPDNPT 340

Query: 412 AFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQ 469
           A ++LG   I  D G    A   A TL  K+ E  P   + L N+G I+ + G  + A  
Sbjct: 341 AHMNLGG--IYQDLGNLDQAL--ASTL--KSLELKPDNPDTLINLGGIYKDLGNLDQALA 394

Query: 470 SFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLF 529
           S   +L         D+ T    +      L   D  L    ++    +EL  +    L 
Sbjct: 395 STLKSLE-----LKPDNPTAHMNLGGIYQDLDNLDQALASTLKS----LELKPDNPDTLI 445

Query: 530 NLARLLEQIH--DTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALK 587
           NL  + + +   D   AS L  L L    D   A++ L  I K   NL  ++    ++L+
Sbjct: 446 NLGGIYKDLGNLDQALASTLKSLEL--KPDNPTAHMNLGGIYKDLGNLDQALASTLKSLE 503

Query: 588 VNGKYPNALSMLGDL--ELKNDDWVKAKETFRAASDATDGKDSYATLS-----LGNWN-- 638
           +    P A   LG +  +L N D   A  T ++     D  D+   L      LGN +  
Sbjct: 504 LKPDNPTAHMNLGGIYQDLGNLDQALA-STLKSLELQPDNPDTLINLGGIYKDLGNLDQA 562

Query: 639 YFAALRNEKRAPKLEAT------------HLEKAKELYTRVIVQHTSNLYAANGAGVVLA 686
             + L++ +  P    T            +L++A     + +     N  A    G +  
Sbjct: 563 LASTLKSLELKPDNPDTLINLGGIYKDLGNLDQALASTLKSLELKPDNPTAHMNLGGIYQ 622

Query: 687 EKGQFDVSKDLFTQVQEAASGSVFVQM----PDVWINLAHVYFAQGNFALAMKMYQNCLR 742
           + G  D         Q  AS    +++    PD  INL  +Y   GN   A+      L 
Sbjct: 623 DLGNLD---------QALASTLKSLELKPDNPDTLINLGGIYKDLGNLDQALASTLKSLE 673

Query: 743 KFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFS---- 798
               N D   L+ L   + +         S L+++ L P N T   + G   Q       
Sbjct: 674 LKPDNPDT--LINLGGIYKDLGNLDQALASTLKSLELKPDNPTALINLGGIYQDLGNLDQ 731

Query: 799 --ASTLQKTRRTAD 810
             ASTL+      D
Sbjct: 732 ALASTLKSLELKPD 745



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 66/299 (22%), Positives = 124/299 (41%), Gaps = 12/299 (4%)

Query: 119  KASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRY 178
            K+  +    P T +  G +    G ++QA ++    LE   DN   L+    +  + G  
Sbjct: 874  KSLELKPDNPDTLINLGGIYKDLGNLDQALASTLKSLELKPDNPDTLINLGGIYKDLGNL 933

Query: 179  SDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA 238
              +L    ++L++ P  P  + + +G     L  L +A  +  ++L+L P+N  A + L 
Sbjct: 934  DQALASTLKSLELKPDNPDTL-INLGGIYKDLDNLDQALASTLKSLELKPDNPTAHMNLG 992

Query: 239  VMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVT 298
             +     +   + + +    ++ E+ P     L  L   +   G    ++Q   + L   
Sbjct: 993  GI---YKDLGNLDQALASTLKSLELKPDNPDTLINLGGIYKDLGN---LDQALASTLKSL 1046

Query: 299  NHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK-EINKPHEFIFPYYGLGQVQLKLGD 357
               P    +  NL   Y   G+ ++A    + S++ + + P   I     LG +   LG+
Sbjct: 1047 ELKPDNPDTLINLGGIYKDLGNLDQALASTLKSLELKPDNPDTLI----NLGGIYQDLGN 1102

Query: 358  FRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDL 416
               AL +  K LE+ PDN      LG IY  LG +++A     K+ ++ P    A  +L
Sbjct: 1103 LDQALASTLKSLELQPDNPTAHMNLGGIYQDLGNLDQALASTLKSLELKPDSPGAVNNL 1161



 Score = 53.9 bits (128), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 61/288 (21%), Positives = 117/288 (40%), Gaps = 17/288 (5%)

Query: 119  KASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRY 178
            K+  +    P T +  G +    G ++QA ++    LE   DN   L+    +  +    
Sbjct: 908  KSLELKPDNPDTLINLGGIYKDLGNLDQALASTLKSLELKPDNPDTLINLGGIYKDLDNL 967

Query: 179  SDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA 238
              +L    ++L++ P  P A  + +G     LG L +A  +  ++L+L P+N + L+ L 
Sbjct: 968  DQALASTLKSLELKPDNPTA-HMNLGGIYKDLGNLDQALASTLKSLELKPDNPDTLINLG 1026

Query: 239  VMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVT 298
             +     +   + + +    ++ E+ P     L  L   +   G    ++Q   + L   
Sbjct: 1027 GI---YKDLGNLDQALASTLKSLELKPDNPDTLINLGGIYKDLGN---LDQALASTLKSL 1080

Query: 299  NHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDF 358
               P    +  NL   Y   G+ ++A     +++K +    +    +  LG +   LG+ 
Sbjct: 1081 ELKPDNPDTLINLGGIYQDLGNLDQA---LASTLKSLELQPDNPTAHMNLGGIYQDLGNL 1137

Query: 359  RSALTNFEKVLEIYPDNCETLKALGHIYVQLG-------QIEKAQELL 399
              AL +  K LE+ PD+   +  L     QL         +E+A ELL
Sbjct: 1138 DQALASTLKSLELKPDSPGAVNNLKAFIEQLNLSQSNAKNLERAYELL 1185


>gi|282898924|ref|ZP_06306907.1| hypothetical protein CRC_00158 [Cylindrospermopsis raciborskii
           CS-505]
 gi|281196178|gb|EFA71092.1| hypothetical protein CRC_00158 [Cylindrospermopsis raciborskii
           CS-505]
          Length = 862

 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 76/312 (24%), Positives = 138/312 (44%), Gaps = 12/312 (3%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
           A + + ++ +I+     T    G+ L   G+ ++A   F+  L+ + DN   L       
Sbjct: 95  ACEIFERSLQINPDNTITLTSYGKALADSGDYKKACEIFERSLQINPDNTITLNSYGKAL 154

Query: 173 FNRGRYSDSLEFYKRALQVHPSCPGAIRL-GIGLCRYKLGQLGKARQAFQRALQLDPENV 231
            + G Y  + E ++R+LQ++P     I L   G          KA + F+R+LQ++P+N 
Sbjct: 155 ADSGDYKKACEIFERSLQINPD--DTITLNSYGKALADSDDYKKACEIFERSLQINPDNT 212

Query: 232 EALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLT 291
              + L        ++   +K  E  +R+ +I P   + L         +G +    ++ 
Sbjct: 213 ---ITLNSYGKALADSGDYKKACEIFERSLQINPDDTITLTSYGKALADSGDYKKACEIF 269

Query: 292 ETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQV 351
           E +L +         SY+   ++    GDY+KA   +  S+ +IN P + I    G G+ 
Sbjct: 270 ERSLQINPDNTITLTSYW---KALADSGDYKKACEIFERSL-QIN-PDDTI-TLTGYGKA 323

Query: 352 QLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQ 411
               GD++ A   FE+ L+I PD+  TL + G      G  +KA E+  ++ +I+P D  
Sbjct: 324 LADSGDYKKACEIFERSLQINPDDTITLTSYGKALADSGDYKKACEIFERSLQINPDDTI 383

Query: 412 AFIDLGELLISS 423
                G+ L  S
Sbjct: 384 TLTSYGKALADS 395



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 89/376 (23%), Positives = 163/376 (43%), Gaps = 22/376 (5%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
           A + + ++ +I+     T    G+ L   G+ ++A   F+  L+ + D+   L       
Sbjct: 27  ACEIFERSLQINPDNTITLNSYGKALADSGDYKKACEIFERSLQINPDDTITLNSYWKAL 86

Query: 173 FNRGRYSDSLEFYKRALQVHPSCPGAIRL-GIGLCRYKLGQLGKARQAFQRALQLDPENV 231
            + G Y  + E ++R+LQ++P     I L   G      G   KA + F+R+LQ++P+N 
Sbjct: 87  ADSGDYKKACEIFERSLQINPD--NTITLTSYGKALADSGDYKKACEIFERSLQINPDNT 144

Query: 232 EALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLT 291
              + L        ++   +K  E  +R+ +I P   + LN        +  +    ++ 
Sbjct: 145 ---ITLNSYGKALADSGDYKKACEIFERSLQINPDDTITLNSYGKALADSDDYKKACEIF 201

Query: 292 ETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQV 351
           E +L +        +SY    ++    GDY+KA   +  S+ +IN         Y  G+ 
Sbjct: 202 ERSLQINPDNTITLNSY---GKALADSGDYKKACEIFERSL-QINPDDTITLTSY--GKA 255

Query: 352 QLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQ 411
               GD++ A   FE+ L+I PDN  TL +        G  +KA E+  ++ +I+P D  
Sbjct: 256 LADSGDYKKACEIFERSLQINPDNTITLTSYWKALADSGDYKKACEIFERSLQINPDDTI 315

Query: 412 AFIDLGELLI-SSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQS 470
                G+ L  S D   A + F+  R+L     + +    L + G    + G+++ A + 
Sbjct: 316 TLTGYGKALADSGDYKKACEIFE--RSLQINPDDTI---TLTSYGKALADSGDYKKACEI 370

Query: 471 FKDAL----GDGIWLT 482
           F+ +L     D I LT
Sbjct: 371 FERSLQINPDDTITLT 386



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 83/365 (22%), Positives = 161/365 (44%), Gaps = 18/365 (4%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
           A + + ++ +I+  +  T     + L   G+ ++A   F+  L+ + DN   L       
Sbjct: 61  ACEIFERSLQINPDDTITLNSYWKALADSGDYKKACEIFERSLQINPDNTITLTSYGKAL 120

Query: 173 FNRGRYSDSLEFYKRALQVHPSCPGAIRL-GIGLCRYKLGQLGKARQAFQRALQLDPENV 231
            + G Y  + E ++R+LQ++P     I L   G      G   KA + F+R+LQ++P++ 
Sbjct: 121 ADSGDYKKACEIFERSLQINPD--NTITLNSYGKALADSGDYKKACEIFERSLQINPDDT 178

Query: 232 EALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLT 291
              + L        ++   +K  E  +R+ +I P   + LN        +G +    ++ 
Sbjct: 179 ---ITLNSYGKALADSDDYKKACEIFERSLQINPDNTITLNSYGKALADSGDYKKACEIF 235

Query: 292 ETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQV 351
           E +L +    P  + +  +  ++    GDY+KA   +  S+ +IN  +      Y   + 
Sbjct: 236 ERSLQI---NPDDTITLTSYGKALADSGDYKKACEIFERSL-QINPDNTITLTSY--WKA 289

Query: 352 QLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQ 411
               GD++ A   FE+ L+I PD+  TL   G      G  +KA E+  ++ +I+P D  
Sbjct: 290 LADSGDYKKACEIFERSLQINPDDTITLTGYGKALADSGDYKKACEIFERSLQINPDDTI 349

Query: 412 AFIDLGELLI-SSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQS 470
                G+ L  S D   A + F+  R+L     + +    L + G    + G+++ A + 
Sbjct: 350 TLTSYGKALADSGDYKKACEIFE--RSLQINPDDTI---TLTSYGKALADSGDYKKACEI 404

Query: 471 FKDAL 475
           F+ +L
Sbjct: 405 FERSL 409



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 85/358 (23%), Positives = 154/358 (43%), Gaps = 30/358 (8%)

Query: 135 GQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS 194
           G+ L   G+ ++A   F+  L+ + DN   L        + G Y  + E ++R+LQ++P 
Sbjct: 15  GKALADSGDYKKACEIFERSLQINPDNTITLNSYGKALADSGDYKKACEIFERSLQINPD 74

Query: 195 CPGAIRLGIGLCRY-----KLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAG 249
                   I L  Y       G   KA + F+R+LQ++P+N    + L        ++  
Sbjct: 75  DT------ITLNSYWKALADSGDYKKACEIFERSLQINPDNT---ITLTSYGKALADSGD 125

Query: 250 IRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYY 309
            +K  E  +R+ +I P   + LN        +G +    ++ E +L +        +SY 
Sbjct: 126 YKKACEIFERSLQINPDNTITLNSYGKALADSGDYKKACEIFERSLQINPDDTITLNSY- 184

Query: 310 NLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVL 369
              ++     DY+KA   +  S+ +IN  +      Y  G+     GD++ A   FE+ L
Sbjct: 185 --GKALADSDDYKKACEIFERSL-QINPDNTITLNSY--GKALADSGDYKKACEIFERSL 239

Query: 370 EIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLI-SSDTGAA 428
           +I PD+  TL + G      G  +KA E+  ++ +I+P +        + L  S D   A
Sbjct: 240 QINPDDTITLTSYGKALADSGDYKKACEIFERSLQINPDNTITLTSYWKALADSGDYKKA 299

Query: 429 LDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL----GDGIWLT 482
            + F+  R+L     + +    L   G    + G+++ A + F+ +L     D I LT
Sbjct: 300 CEIFE--RSLQINPDDTI---TLTGYGKALADSGDYKKACEIFERSLQINPDDTITLT 352



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 83/342 (24%), Positives = 150/342 (43%), Gaps = 38/342 (11%)

Query: 155 LEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL-GIGLCRYKLGQL 213
           ++ + DN  AL        + G Y  + E ++R+LQ++P     I L   G      G  
Sbjct: 1   MQINPDNTIALNSYGKALADSGDYKKACEIFERSLQINPD--NTITLNSYGKALADSGDY 58

Query: 214 GKARQAFQRALQLDPENVEAL----VALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAM 269
            KA + F+R+LQ++P++   L     ALA       ++   +K  E  +R+ +I P   +
Sbjct: 59  KKACEIFERSLQINPDDTITLNSYWKALA-------DSGDYKKACEIFERSLQINPDNTI 111

Query: 270 ALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYM 329
            L         +G +    ++ E +L +        +SY    ++    GDY+KA   + 
Sbjct: 112 TLTSYGKALADSGDYKKACEIFERSLQINPDNTITLNSY---GKALADSGDYKKACEIFE 168

Query: 330 ASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQL 389
            S+ +IN         Y  G+      D++ A   FE+ L+I PDN  TL + G      
Sbjct: 169 RSL-QINPDDTITLNSY--GKALADSDDYKKACEIFERSLQINPDNTITLNSYGKALADS 225

Query: 390 GQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIE 449
           G  +KA E+  ++ +I+P D       G+ L  +D+G     +K A  + +++   + I 
Sbjct: 226 GDYKKACEIFERSLQINPDDTITLTSYGKAL--ADSG----DYKKACEIFERS---LQIN 276

Query: 450 VLNNIGVIHF-----EKGEFESAHQSFKDAL----GDGIWLT 482
             N I +  +     + G+++ A + F+ +L     D I LT
Sbjct: 277 PDNTITLTSYWKALADSGDYKKACEIFERSLQINPDDTITLT 318



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 54/257 (21%), Positives = 109/257 (42%), Gaps = 47/257 (18%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
           A + + ++ +I+  +  T    G+ L   G+ ++A   F+  L+ + DN   L       
Sbjct: 231 ACEIFERSLQINPDDTITLTSYGKALADSGDYKKACEIFERSLQINPDNTITLTSYWKAL 290

Query: 173 FNRGRYSDSLEFYKRALQVHPSCPGAIRL-GIGLCRYKLGQLGKARQAFQRALQLDPENV 231
            + G Y  + E ++R+LQ++P     I L G G      G   KA + F+R+LQ++P++ 
Sbjct: 291 ADSGDYKKACEIFERSLQINPD--DTITLTGYGKALADSGDYKKACEIFERSLQINPDDT 348

Query: 232 EALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLT 291
              + L        ++   +K  E  +R+ +I P                          
Sbjct: 349 ---ITLTSYGKALADSGDYKKACEIFERSLQINP-------------------------- 379

Query: 292 ETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQV 351
           +  + +T++G   + S           GDY+KA   +  S++   +P  +IF  +   + 
Sbjct: 380 DDTITLTSYGKALADS-----------GDYKKACEIFERSLQI--QPDNYIF--FIFAKC 424

Query: 352 QLKLGDFRSALTNFEKV 368
             +LG ++ A+T  E++
Sbjct: 425 LEQLGRYKDAITQIEQI 441


>gi|300120392|emb|CBK19946.2| unnamed protein product [Blastocystis hominis]
          Length = 429

 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 73/289 (25%), Positives = 134/289 (46%), Gaps = 19/289 (6%)

Query: 2   ACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQ 61
           A + IP+ +SE+ + + +D+L  +  ++   L  E      W+ IA  Y+   K EQF +
Sbjct: 10  ASIRIPLTDSEQCIELFVDELSDNTDELTQTLFGENVHPHYWIQIAVGYYSVKKYEQFLK 69

Query: 62  ILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKAS 121
           I++     E    +      ++ ++N    Y     K++T     EE+     Q+  +++
Sbjct: 70  IIDTILREENFRRFESEYECKLVLINYRTAY-----KLKTNTLTAEEY----RQFDEESN 120

Query: 122 RI------DMHEPSTWVGKGQLLLAKGEVEQASSAFKI-VLEADRDNVPALLGQACVEFN 174
           R+      D    +T +    +   + +  +A+  + I  L+ DR  + + +  A     
Sbjct: 121 RLINMEQQDRAASATSLALKCIYCLRTDNMKAAHTYMIHALDRDRSCLLSSIAAAFYFIQ 180

Query: 175 RGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEAL 234
              Y+ ++  Y+ AL  HP  P ++R+GI  C YK     KA  A  RALQLDP N EAL
Sbjct: 181 SRDYAKAINAYQMALLYHPDAPASVRVGIAYCFYKQNNYKKAFLALDRALQLDPANEEAL 240

Query: 235 VALAVMDLQANEAAG---IRKGMEKMQRAFEIYPYCAMALNYLANHFFF 280
              A +   A + +    +   ++ +Q+ + + P    ALNY+A+H F+
Sbjct: 241 AMKAALQRTAADLSPKERVIASLQTIQQLYRVNPNHPQALNYIADHTFW 289


>gi|301779788|ref|XP_002925318.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog, partial
           [Ailuropoda melanoleuca]
          Length = 468

 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 63/177 (35%), Positives = 101/177 (57%), Gaps = 11/177 (6%)

Query: 737 YQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQK 796
           Y+NCLRKFY + + +++LYLAR  ++  + Q+CK++LL+A H+APS+  L F+  + +Q+
Sbjct: 1   YENCLRKFYKHQNTEVVLYLARALFKCGKLQECKQTLLKARHVAPSDTVLMFNVALVLQR 60

Query: 797 FSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLL 856
            + S L+  +    EV + V ELE A R FS+LS   +     FD     T    C  LL
Sbjct: 61  LATSVLKDEKSNLKEVLNAVKELELAHRYFSYLSKVGDKMR--FDLALAATEARQCSDLL 118

Query: 857 DAAKIHREAAEREEQQNR-------QRQEAARQAALAEE--ARRKAEEQKKYLLEKR 904
             A+ H   A +++++ R       Q +E  RQ  L E+   R + +E++K LLE+R
Sbjct: 119 SQAQYHVARARKQDEEERELRAKQEQEKELLRQKLLKEQEEKRLREKEEQKKLLEQR 175


>gi|385302894|gb|EIF47000.1| component of the paf1p complex [Dekkera bruxellensis AWRI1499]
          Length = 545

 Score = 89.7 bits (221), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 122/535 (22%), Positives = 216/535 (40%), Gaps = 82/535 (15%)

Query: 6   IPVQNSEEEVRV-ALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQILE 64
           IP++   EEV + A   LP D+S++  +L  E+   + WL++A+ Y  + K ++   +++
Sbjct: 29  IPLKEEGEEVVIDANTDLPEDSSELCTLLTNEECKPEYWLLVAKAYANKEKYDEALNVVK 88

Query: 65  EGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKA-SRI 123
           + S   +  + A    +       LG Y     + E+       H   A        S +
Sbjct: 89  QASQTSL--FGASTALDNFVGWLQLGRYSK---EAESGDSAASGHLSEAISKSEACLSSV 143

Query: 124 DMHEPSTWVGKGQLLLAK------GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGR 177
              EP+T +     + +K        +++ S     +L    DN  ALLG+A + F R  
Sbjct: 144 ANDEPATLLKAVGTMASKHQKGWRSNLDKESRLLDTLLRKHPDNCYALLGKAKIFFYRES 203

Query: 178 YSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVAL 237
           YS +L+ +++ L ++P      R+GIGLC + L +   A +A+  ++ +   N       
Sbjct: 204 YSGALKLFQKVLMLNPLLLPDPRIGIGLCYWFLDRKDLASRAWXNSVLVHRHN------- 256

Query: 238 AVMDLQANEAAGIRKGMEKMQRAFEIYP----YCAM---ALNY----------------- 273
                  N    +   M K    F        +CAM   A+ +                 
Sbjct: 257 -------NTEGKLLTTMAKFDECFTSAKSDEQFCAMYKEAVEFAEATYREGRQGPAVQVV 309

Query: 274 LANHFFFTGQHFLVEQLTETALAVTNHGPT--KSHSYYNLARS--YHSKGDYE------- 322
           LA  +F  G++    ++ +  +A   H  +   S + +  AR     ++G  +       
Sbjct: 310 LAALYFLKGEYMTCSRVCDGVIARPGHVASFVXSDALFWKARCCFVQAQGTAQGTAQGHD 369

Query: 323 ---KAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 379
              KA   +  ++K +N+ +       GLGQ       +  A+  FEKV ++ P N    
Sbjct: 370 QIRKAQRLFSEAIK-LNEAN--TLARMGLGQCLTVRKQYSDAIRCFEKVQKLQPLNMHVN 426

Query: 380 KALGHIYVQLGQIEK-AQELLRKAAKI-----DPRDAQAFIDLGELLISSDTGAALDAFK 433
            ALG +Y +  +  K A + L K   +     +P    A   L  L  S+D   +L   +
Sbjct: 427 YALGALYARSRRFRKQAVDXLTKYVNLCSDRREPISVNALFTLSXLYESTDMSKSLSYLQ 486

Query: 434 TARTL---LKKAGEEVPIEVLNNIGVIHFEKG-----EFESAHQSFKDALGDGIW 480
            A+     L K+  +V   +LNNIGV+ F  G     EFE A ++     G+  W
Sbjct: 487 MAKKQELELGKSESQVSYALLNNIGVLEFLSGLDSSREFELATEALSGXSGEXRW 541


>gi|71660685|ref|XP_822058.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
 gi|70887451|gb|EAO00207.1| hypothetical protein, conserved [Trypanosoma cruzi]
          Length = 912

 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 140/597 (23%), Positives = 249/597 (41%), Gaps = 62/597 (10%)

Query: 125 MHEPSTWVGKGQLLLAKG-EVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLE 183
           +H P     +G   +A G  ++ A   F+  + ADR  V A LG A V ++  RY     
Sbjct: 79  LHRPVLLYLEGLAAMASGTSLQTARVKFEEAIRADRYFVLARLGLAAVSYHMKRYKRCFS 138

Query: 184 FYKRALQ-VHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDL 242
            Y+  L+ +  SCP  +R+G+GLC Y L  L  A++  +RAL+++ ++  AL+ L V+ L
Sbjct: 139 HYRVVLETLGSSCPPIVRVGMGLCAYHLNHLDYAQRCLERALEVNEDDELALLVLLVVFL 198

Query: 243 QANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGP 302
              +   I K +E  QR   I P  A  L  +A   +F               AVT    
Sbjct: 199 DRRQ---IPKVIEVAQRLRGILPENATVLLKVAELVYFR--------------AVTQ--- 238

Query: 303 TKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSAL 362
            +  +  N  R               +A V+ +    E     Y  G++ L LGD  +A 
Sbjct: 239 DRVKASANPIRR-------------LLAEVRRVATVEESAMADYQEGRLCLALGDLSNAR 285

Query: 363 TNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS 422
              E  +++ P+            +  G+  +A++LL +  K  P   +    L   + +
Sbjct: 286 LLLESAMQVLPNLLAARIHYARFLLLSGRETEAEQLLLRINKDHPNHKEVLQLLA--VYA 343

Query: 423 SDTGAALDAFKTARTLLKKAGEEVPIEVLN-NIG--VIHFEKGE---FESAHQSFKDALG 476
           S  G    A + +R L +      P ++ + +I       +KGE     S     +  +G
Sbjct: 344 SRHGLHEKALEYSRRLTEIVA---PGDIRSWSIASWCARLDKGETKKLMSHLARIRKEVG 400

Query: 477 DGIWLTLLDSKTKTYVIDASASMLQ-FKDMQLFHRFENDGNHVELPWNKVTVLFNLARLL 535
           + + + L+        +      LQ   D +L   F  + N   LP   V ++FNLA LL
Sbjct: 401 EPVSMKLM---ANIAALGGDTEALQRIIDCELGADFLGEPN---LPVVYVPLVFNLALLL 454

Query: 536 EQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNA 595
           E+  D   A  LY  ++ ++  +   Y+RL  +AK    L+ ++  +    +V  + P +
Sbjct: 455 EET-DRTRARQLYIFLVKQHGYFRPPYIRLHVLAKDDGFLKQAVAWLVLLQQVLPEDPTS 513

Query: 596 LSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEAT 655
           L+ +G++  +N     A    R+A     G+     L+ G    + + ++ K   +    
Sbjct: 514 LASIGEIFFENGRVGAAMTALRSAR----GRPLPVALAFGAAFLWCSQQHGKDNRRF--- 566

Query: 656 HLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQ 712
            L  AK+ +  V+ +   N+ AA+G    L  +  +D  + L  +V E      +V+
Sbjct: 567 -LASAKDRFAFVLRRDNGNVLAAHGLACCLGLEADYDRCQCLLDRVGEVRPNCSYVR 622


>gi|452824639|gb|EME31640.1| hypothetical protein Gasu_10260 [Galdieria sulphuraria]
          Length = 1007

 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 193/854 (22%), Positives = 336/854 (39%), Gaps = 170/854 (19%)

Query: 47  AREYFKQGKVEQFRQILEEG---SSPEIDEYYADVRYERIAILNAL-GVYYTYLG----- 97
           A    K+ K+E+ + +LEE    SS    E +   + E +A+   L G Y   +      
Sbjct: 21  ASSLVKEQKLEECKTVLEEALLNSSRNPSELFD--QKEVVALRERLTGCYLMLIATGRQN 78

Query: 98  ---KIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-----VEQASS 149
              K +T+++  E+   L +Q+    S I + E   W    ++L  + E      EQ SS
Sbjct: 79  ARTKEDTQKQISEQIAFLHSQF---GSTIRLQELQGW---KEILGERYESALRCFEQISS 132

Query: 150 AFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYK 209
           A K +L +        +G A  +F +G   DSLE +   ++    C  A  LGI  C  +
Sbjct: 133 APKSLLSS--------IGSATAKFYKGDIQDSLESFGSIVRRWRRCESAW-LGIARCYLE 183

Query: 210 LGQLGKARQAFQRALQLDPE---------NVEALVALAVMDLQANEAAGIRKGMEKMQRA 260
            G   KA+ A  + ++   +         + EA +++A +        G+  G+  ++  
Sbjct: 184 KGDHKKAQMALSKTIEFAKQKSTGFSSFFSYEAQLSIAYIAFGQGTKEGVEAGLSILKEL 243

Query: 261 FEIYPYCAM----ALNYLANHFFFTGQHFLVEQL-TETALAVTNHGPTKSHSYYNLARSY 315
           +      A      +N LA + F+  ++     L  +  L  T     K  S + LAR  
Sbjct: 244 YRDNTNDAQNDPRVVNRLAEYLFYRKEYKRASALLCKLNLTQTIFPRAKGESLFQLARLA 303

Query: 316 HSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLG-------DFRSALTNFEKV 368
           H  G+  +A  +Y  ++ E           YGL Q +L L        DF++A    E+V
Sbjct: 304 HVSGELAEAENFYTQALLEDG---------YGLPQARLALANLYLSREDFQAAADCLERV 354

Query: 369 LEIYPDNCETLKALGHIYV---------QLGQIEKAQEL-LRKA--------------AK 404
           +   P+  E    LG I            +GQ EK  +  LR+A              A 
Sbjct: 355 ISQRPECLEAKATLGIILTLFEMKNLDTTIGQEEKLTKYELRRARREKAISLLTEFVDAT 414

Query: 405 IDPRDAQAFIDLGEL----------LISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNI 454
           I P D  A + L  L          L+  D+    D  +    ++ +    V I + NNI
Sbjct: 415 ITP-DILALVCLAYLFEENKPERACLLLEDSLRLFD--EQPNIIIARNSPSVKIRLQNNI 471

Query: 455 GVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFEND 514
             +    G +  A +         I+    D  +  Y            D  +F   +N 
Sbjct: 472 ASLLTRIGRYSEAEKVL-----STIFNIYTDLSSGDY------------DEDVF--LQNI 512

Query: 515 GNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNN 574
             + E+P   + +L+N A + E     V A  LY  I+  Y +Y DA  RL  ++ A ++
Sbjct: 513 QKYNEIP---ILLLYNQALVWELEGKMVLARTLYSHIISVYGEYPDALFRLGYLSYANDD 569

Query: 575 LQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKE---------TFRAASDATDG 625
              + E      K   K  + L  L  L     D+ K +           F    +A D 
Sbjct: 570 FVAAKEFYERGAKFKPKLASHL--LATLARSQGDYHKYQSLLEQALQSRQFNETREALD- 626

Query: 626 KDSYATLSLGNWNYFAALR--NEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGV 683
            D Y+ + L N+ Y   L+  +E+R  K     ++K  EL  RV+  +  N +AAN  G+
Sbjct: 627 -DDYSFVRLCNF-YIDCLQVVDERRQRKF----MDKCLELLQRVLSHYPYNAFAANAFGI 680

Query: 684 VLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYF------------------ 725
            ++ +  +  ++++F        G+   +M    +NLAH+                    
Sbjct: 681 YVSLREMYSDAREIF----HGLVGTPAAEMAK--LNLAHIQVHLARNLLHSSGERQIVRN 734

Query: 726 AQGNFAL--AMKMYQNCLRKFYY-NTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPS 782
           A  + AL  A+K+Y++ L +     T  +++LYL+  ++E   + +  + L R +H  P 
Sbjct: 735 AAADTALSSAIKLYEDSLLQTRNEETRCEMMLYLSLANFEKAHFSEACRLLTRLLHRMPM 794

Query: 783 NYTLRFDAGVAMQK 796
              L F+  + +++
Sbjct: 795 YLPLWFNWALTLEE 808


>gi|334117447|ref|ZP_08491538.1| histidine kinase [Microcoleus vaginatus FGP-2]
 gi|333460556|gb|EGK89164.1| histidine kinase [Microcoleus vaginatus FGP-2]
          Length = 949

 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 94/392 (23%), Positives = 180/392 (45%), Gaps = 26/392 (6%)

Query: 109 HFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQ 168
            F  A Q + +A + +   P T       L + G+++QA   F+  L+   D+   L   
Sbjct: 211 QFEKAQQIFERALQREPDNPITLSQYANALASNGQLDQALEFFERSLQIPPDDAVTLSRY 270

Query: 169 ACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGI-GLCRYKLGQLGKARQAFQRALQLD 227
           A    + G++  + +F++++LQ+ P    A+ L          GQL KA Q F+R+LQ++
Sbjct: 271 ANALASNGQFEKAWQFFEQSLQIKPD--NAVTLSCYANALASNGQLEKAWQFFERSLQIE 328

Query: 228 PENVEAL--VALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 285
           P N   L   A A+     +E     K ++ ++R+ ++ P   + LN+ A     TGQH 
Sbjct: 329 PNNQRILNQYATALASTGQHE-----KVVQILERSLQLEPNDPITLNHYATALASTGQHE 383

Query: 286 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 345
              +L + +L +  + P     Y N   +  S G +EKA  ++  S++   +P++ I   
Sbjct: 384 KTLELLKRSLKLEPNAPITLSRYAN---ALASTGQHEKALQFFERSLQL--EPNDAI--- 435

Query: 346 YGLGQVQLKL---GDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKA 402
             L +    L   G    AL  FE+ ++I P++  TL +  H     GQ EKA +   ++
Sbjct: 436 -TLSRYANALASNGHPDQALQFFERSIQIKPNHPRTLSSYAHTLATTGQYEKALQYFERS 494

Query: 403 AKIDPRDAQ---AFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLN-NIGVIH 458
            +I P++++   +++D    L+    G   +A    + +  +A       V+  N+G ++
Sbjct: 495 LQIQPQNSRMLSSYLDFQYALVLEKVGKHQEAIDQLKAIKIEALTPYQANVIRVNLGRLY 554

Query: 459 FEKGEFESAHQSFKDALGDGIWLTLLDSKTKT 490
           ++  + E   + F+ A+ +       D K +T
Sbjct: 555 YQIKQPEKGKEYFEAAIANSDDKERTDDKERT 586



 Score = 48.1 bits (113), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 76/301 (25%), Positives = 117/301 (38%), Gaps = 35/301 (11%)

Query: 131 WVGKGQLLLAKGEV---EQASSAFKIVLEADRDNVPALLGQACV------EFNRGRYSDS 181
           W   GQ L A  EV   ++AS +F+   + D  N   +L + C        FNR +  + 
Sbjct: 44  WSKYGQTL-ALPEVNRDDEASISFEKARQID-PNDKKVLSRYCKFLQDPNRFNRSK--NL 99

Query: 182 LEFYKRALQVHPSCPGAIR-LGIGLCRYKLG------------QLGKARQAFQRALQLDP 228
           L  Y+  LQ+ PS    +   G  L +                +  KA    + AL+ +P
Sbjct: 100 LSIYEDLLQLEPSNVVTLTGYGKALVKEGEYEKEKGEYEKAQVKYEKAIGILESALKFEP 159

Query: 229 ENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVE 288
            N   L   A   L  NE    RK  + ++R   I P     +   AN     GQ    +
Sbjct: 160 GNKITLNVYAEA-LIKNE--NYRKAFDILERLLVIEPTNNTTVRTYANALASNGQFEKAQ 216

Query: 289 QLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGL 348
           Q+ E AL      P     Y N   +  S G  ++A  ++  S++    P +        
Sbjct: 217 QIFERALQREPDNPITLSQYAN---ALASNGQLDQALEFFERSLQ---IPPDDAVTLSRY 270

Query: 349 GQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPR 408
                  G F  A   FE+ L+I PDN  TL    +     GQ+EKA +   ++ +I+P 
Sbjct: 271 ANALASNGQFEKAWQFFEQSLQIKPDNAVTLSCYANALASNGQLEKAWQFFERSLQIEPN 330

Query: 409 D 409
           +
Sbjct: 331 N 331


>gi|386002707|ref|YP_005921006.1| Tetratricopeptide TPR_2 [Methanosaeta harundinacea 6Ac]
 gi|357210763|gb|AET65383.1| Tetratricopeptide TPR_2 [Methanosaeta harundinacea 6Ac]
          Length = 949

 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 145/658 (22%), Positives = 260/658 (39%), Gaps = 90/658 (13%)

Query: 108 EHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLG 167
           E + LA  Y NK+  ID   P  W  KG +L   G +++A S F   LE D  +      
Sbjct: 39  ESYDLALLYVNKSLDIDPAYPDAWSLKGYILSDLGRLDEALSCFNRSLEIDPQDPHIWYS 98

Query: 168 QACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLD 227
           +  V +  G Y ++++ Y RA++ + + P   R   GL  Y LG+  +A +++  A+  D
Sbjct: 99  KGFVLYGLGIYDEAIDCYDRAMEFNSTGPDLWR-ARGLALYSLGRYEEAVRSYDEAIVFD 157

Query: 228 PENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYC-------AMALNYLANHFFF 280
           P         A  DL   +   +  G+ + ++A E Y +        A + +  A   + 
Sbjct: 158 P---------AQGDLWYQKGLAL-CGLGRYEKAIESYDFAITIDGDDAASWHGKALALYS 207

Query: 281 TGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHE 340
            G+    E+  +      +  P+ +  +YN   + ++ G +E+A   Y A+V+     H 
Sbjct: 208 LGR---AEEAIDCYDRAIDIDPSLTDVWYNKGIALYALGRHEEAFKCYDAAVEIDPLYHP 264

Query: 341 FIF----PYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQ 396
             F     +Y LG+V+        A+  +++ ++I P         G+    LG+ ++AQ
Sbjct: 265 AWFNKGLAFYSLGRVE-------EAIDCYDRAIDIDPSLVAVWNNKGNALYALGRFDEAQ 317

Query: 397 ELLRKAAKIDPRDAQAFIDLGELLISSDTG-AALDAFKTARTLLKKAGEEVPIEVLNNIG 455
           E  R+A +IDP  +  + +LG +L     G  AL+A+     +          E   N G
Sbjct: 318 ECYRRAVEIDPEYSNPWYNLGVVLQRLGRGEEALEAYDRLIEIDPNLS-----EAWYNRG 372

Query: 456 VIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVID---ASASMLQFKD-MQLFHR- 510
           +  +  G ++ A   +   L        +D +      D   A  S+ ++++ +  +   
Sbjct: 373 LALYSLGRYDEAAGCYDRVL-------EIDPENGDVWYDKALALGSLGRYEEALDCYDEA 425

Query: 511 FENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAK 570
            E      E+  N+  +L++L R                     Y + V  Y  +  I  
Sbjct: 426 LEAGPRRPEVLNNRCNILYSLER---------------------YNESVGCYGDVIGIDP 464

Query: 571 ARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKN----DDWVKAKETFRAAS---DAT 623
              N   +  +   AL   G+Y  A +  G+    N    D WV   + F AA     A 
Sbjct: 465 GYENAWYNRGV---ALYTLGRYEEASASYGEAAALNGSRVDAWVGMGDAFAAAGIYDRAV 521

Query: 624 DGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGV 683
           +  D    L  G+     A+   +      A+ LE+A E +  VI    S        G+
Sbjct: 522 EAYDGAIALYPGD----PAVWYNRGLLLYNASRLEEAVESFDEVIEIDPSYEGVWRLKGL 577

Query: 684 VLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCL 741
            L   G+ D + D + +  E +   V      +W N   V F+ G +  A++ Y   +
Sbjct: 578 ALYALGRSDEAIDCYDEALEISPSEV-----SLWYNRGVVLFSLGRYGEAIESYDRVI 630



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 110/465 (23%), Positives = 176/465 (37%), Gaps = 96/465 (20%)

Query: 70  EIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPS 129
           EID  Y++  Y        LGV    LG+ E            A + Y++   ID +   
Sbjct: 325 EIDPEYSNPWYN-------LGVVLQRLGRGEE-----------ALEAYDRLIEIDPNLSE 366

Query: 130 TWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRAL 189
            W  +G  L + G  ++A+  +  VLE D +N      +A    + GRY ++L+ Y  AL
Sbjct: 367 AWYNRGLALYSLGRYDEAAGCYDRVLEIDPENGDVWYDKALALGSLGRYEEALDCYDEAL 426

Query: 190 QVHP-----------------------SCPGAIRLGI-----------GLCRYKLGQLGK 215
           +  P                        C G + +GI           G+  Y LG+  +
Sbjct: 427 EAGPRRPEVLNNRCNILYSLERYNESVGCYGDV-IGIDPGYENAWYNRGVALYTLGRYEE 485

Query: 216 ARQAFQRALQLDPENVEALVALAVMDLQANEAAGI-RKGMEKMQRAFEIYPYCAMALNYL 274
           A  ++  A  L+   V+A V +      A  AAGI  + +E    A  +YP    A+ Y 
Sbjct: 486 ASASYGEAAALNGSRVDAWVGMG----DAFAAAGIYDRAVEAYDGAIALYP-GDPAVWYN 540

Query: 275 ANHFFFTGQHFLVEQLTETALAVTNHGPT-------KSHSYYNLARSYHSKGDYEKA--- 324
                +      +E+  E+   V    P+       K  + Y L RS  +   Y++A   
Sbjct: 541 RGLLLYNASR--LEEAVESFDEVIEIDPSYEGVWRLKGLALYALGRSDEAIDCYDEALEI 598

Query: 325 -----GLYYMASVK--EINKPHEFIFPY--------YGLGQVQLKLGDFRSALTNFEKVL 369
                 L+Y   V    + +  E I  Y        Y  G+    LG +  A+  +EKVL
Sbjct: 599 SPSEVSLWYNRGVVLFSLGRYGEAIESYDRVIELDRYEKGEALYSLGRYDEAIECYEKVL 658

Query: 370 EIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAA 428
           E+ P   +     G  +  LG  E++ E   +  +IDP   +  +  G +L+   D   A
Sbjct: 659 EVSPLEAKAWYQKGLAHQILGDYERSAECYDRVVEIDPGYEEVILRRGFVLLRLGDYDGA 718

Query: 429 LDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSF 471
           L ++  A        +E P  +E     G      G FE A  +F
Sbjct: 719 LASYDLAL-------QEDPDDLEAARGRGEALLALGRFEEASATF 756



 Score = 47.0 bits (110), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 75/164 (45%), Gaps = 19/164 (11%)

Query: 70  EIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPS 129
           EID  Y +V   R  +L  LG Y   L   +   +E  +          +A+R       
Sbjct: 693 EIDPGYEEVILRRGFVLLRLGDYDGALASYDLALQEDPDDL--------EAAR------- 737

Query: 130 TWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRAL 189
              G+G+ LLA G  E+AS+ F  +L    ++  A  G+        RY ++++ Y RA+
Sbjct: 738 ---GRGEALLALGRFEEASATFDRILANASEDGGAWHGRGLALAGLLRYDEAIDSYDRAI 794

Query: 190 QVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEA 233
            ++ S    + +G G    + G+L  A  +F RA+ LD E+ EA
Sbjct: 795 AIN-SSDNLLWIGRGGVLEEAGRLEDAVASFDRAIALDQEDPEA 837



 Score = 43.9 bits (102), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 31/120 (25%), Positives = 56/120 (46%), Gaps = 1/120 (0%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
           A   Y++A  I+  +   W+G+G +L   G +E A ++F   +  D+++  A   +    
Sbjct: 786 AIDSYDRAIAINSSDNLLWIGRGGVLEEAGRLEDAVASFDRAIALDQEDPEAWSMRGRAL 845

Query: 173 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 232
              GR  D+   + RA+ + PS  G  + G G      G+  +A   ++ A+ LDP   E
Sbjct: 846 MKAGRLEDAAASFDRAIALDPSS-GEAQRGRGSVFEAQGRAEEAIGCYEAAIALDPPTPE 904



 Score = 43.1 bits (100), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 27/105 (25%), Positives = 50/105 (47%), Gaps = 3/105 (2%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
           A   +++A  +D  +P  W  +G+ L+  G +E A+++F   +  D  +  A  G+  V 
Sbjct: 820 AVASFDRAIALDQEDPEAWSMRGRALMKAGRLEDAAASFDRAIALDPSSGEAQRGRGSVF 879

Query: 173 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKAR 217
             +GR  +++  Y+ A+ + P  P     G G  R   G  G+ R
Sbjct: 880 EAQGRAEEAIGCYEAAIALDPPTPERGSGGAGSWR---GWAGRER 921


>gi|73670079|ref|YP_306094.1| TPR repeat-containing protein [Methanosarcina barkeri str. Fusaro]
 gi|72397241|gb|AAZ71514.1| TPR repeat [Methanosarcina barkeri str. Fusaro]
          Length = 927

 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 106/457 (23%), Positives = 186/457 (40%), Gaps = 73/457 (15%)

Query: 42  LWLIIAREYFKQGKVEQ----FRQILEEGSSP-EIDEYYADVRYERIAILNALGVY---- 92
            W    +  ++ GK E+    +++ LE   +  E+D   +   Y + + L  LG Y    
Sbjct: 147 FWYNKGKTLYELGKQEESTKAYKESLEASENAIELDPRNSLAWYNKGSALQELGNYQEAI 206

Query: 93  YTYLGKIETKQREKEEHFILATQYYN------------KASRIDMHEPSTWVGKGQLLLA 140
             Y   IE     KE  +     +YN            K   +D   P  W  KG  L  
Sbjct: 207 TAYNKAIEIYPEYKEAWYKKGLAFYNSGNYEEAVKACNKTIELDPQNPRVWANKGNALSK 266

Query: 141 KGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIR 200
               E+A +A+   +E D  N  A  G      + G Y ++++FY +A+++ P    A+ 
Sbjct: 267 LNSYEEAITAYNESIELDPQNSVAWNGLGFAVASSGNYEEAIKFYNKAIEIDPQNSEALS 326

Query: 201 LGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRA 260
              G   Y +G   +A +A  +A++++P+N     A+A  D        I K +   + A
Sbjct: 327 -NKGFALYNVGNREEAIKALDKAIEVNPQN-----AVAWYD-----KGSILKNLGNYEEA 375

Query: 261 FEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGD 320
            E +                       ++ TE         P KS ++ N   +  S G+
Sbjct: 376 VEAF-----------------------DKATEL-------DPKKSSAWNNKGNALSSLGN 405

Query: 321 YEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLK 380
           Y++A   Y  ++ EI+ P +   P+   G     LG +  ++  F+K +EI   +  T  
Sbjct: 406 YDEAIKAYDKAI-EID-PQD-PGPWNNKGIALSNLGSYEESIKAFDKAIEINLSSSVTWA 462

Query: 381 ALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLK 440
             G +   LG  E A +   K+ +IDPR++ A+++ G  L +S        ++   T   
Sbjct: 463 NKGLVLSILGNYEGAIKAFDKSIEIDPRNSIAWVNKGNALYNSGE------YEGVITACD 516

Query: 441 KAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDAL 475
           KA E  P  ++   N G      G++E A +++  AL
Sbjct: 517 KAIELDPKNLDAWTNKGKALSSLGDYEEAIKAYDKAL 553



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 87/360 (24%), Positives = 155/360 (43%), Gaps = 24/360 (6%)

Query: 125 MHE-PSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLE 183
           +HE P  W+ +G  L   G  ++A +A+   +E D  N  A   +     N   Y ++++
Sbjct: 73  VHESPIAWIVRGDALANSGNYKEAINAYDKAIELDPQNPEAWNNKGVALSNLSNYEEAIK 132

Query: 184 FYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAF-------QRALQLDPENVEALVA 236
            Y +A+++ P          G   Y+LG+  ++ +A+       + A++LDP N  A   
Sbjct: 133 AYNKAIELDPQN-SLFWYNKGKTLYELGKQEESTKAYKESLEASENAIELDPRNSLAWYN 191

Query: 237 LAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALA 296
                LQ  E    ++ +    +A EIYP    A       F+ +G +   E+  +    
Sbjct: 192 KGSA-LQ--ELGNYQEAITAYNKAIEIYPEYKEAWYKKGLAFYNSGNY---EEAVKACNK 245

Query: 297 VTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLG 356
                P     + N   +      YE+A   Y  S+ E++ P   +  + GLG      G
Sbjct: 246 TIELDPQNPRVWANKGNALSKLNSYEEAITAYNESI-ELD-PQNSV-AWNGLGFAVASSG 302

Query: 357 DFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDL 416
           ++  A+  + K +EI P N E L   G     +G  E+A + L KA +++P++A A+ D 
Sbjct: 303 NYEEAIKFYNKAIEIDPQNSEALSNKGFALYNVGNREEAIKALDKAIEVNPQNAVAWYDK 362

Query: 417 GELLIS-SDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
           G +L +  +   A++AF  A  L  K          NN G      G ++ A +++  A+
Sbjct: 363 GSILKNLGNYEEAVEAFDKATELDPKKS-----SAWNNKGNALSSLGNYDEAIKAYDKAI 417



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 102/412 (24%), Positives = 161/412 (39%), Gaps = 77/412 (18%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
           A + ++K+  ID      WV KG  L   GE E   +A    +E D  N+ A   +    
Sbjct: 477 AIKAFDKSIEIDPRNSIAWVNKGNALYNSGEYEGVITACDKAIELDPKNLDAWTNKGKAL 536

Query: 173 FNRGRYSDSLEFYKRALQVHPSCP-----GAIRLG------------------------- 202
            + G Y ++++ Y +AL++ P  P       I  G                         
Sbjct: 537 SSLGDYEEAIKAYDKALEIEPQDPLTWNNREIAFGHLNNYEEALRAHNREIVSDSEDPEV 596

Query: 203 ----IGLCRYKLGQLGKARQAFQRALQLDPENVEALV--ALAVMDLQANEAAGIRKGMEK 256
                GL  Y  G   ++ +A+ +A++LDPE  +A      +   L+  E A     ++ 
Sbjct: 597 SWNDKGLALYYSGNYEESVKAYDKAIELDPEYADAWFNKGNSFFSLKNYEEA-----IKA 651

Query: 257 MQRAFEIYPYCAMALNY----LANHFFFT----GQHFLVEQLTETALAVTNHGPTKSHSY 308
             +A E+ P  ++A N     L N  ++          +E  ++ + A  N G T S  Y
Sbjct: 652 YDKAIELKPQNSLAWNNKGLALNNSSYYAEALKSYDKAIELNSQDSAAWNNKGNTLSSLY 711

Query: 309 YNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKV 368
                      DYE A   Y  +V EIN   ++   +Y  G     LG +  A+T F K 
Sbjct: 712 -----------DYEGALNAYNKAV-EINP--QYSDAWYNKGNTLCSLGRYEEAVTAFNKT 757

Query: 369 LEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAA 428
           LEI P N       G     LG  E+A +   KA +ID +++         LI S+ G A
Sbjct: 758 LEIDPHNSFAWCNKGIALSSLGNYEEAMKSFDKALEIDSQNS---------LIWSNKGLA 808

Query: 429 LDAFKTARTLLKKAGEEVPI-----EVLNNIGVIHFEKGEFESAHQSFKDAL 475
           L  F      +K   + + I     E  NN G   F  G +E A +++   +
Sbjct: 809 LFEFGKYEEAVKAYNKTIEIDQSNTETWNNRGSAFFLIGNYEEAMKNYNKTI 860



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 76/314 (24%), Positives = 140/314 (44%), Gaps = 21/314 (6%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
           A + YNKA  +D      W  KG+ L   G+ E+++ A+K  LEA  + +      +   
Sbjct: 130 AIKAYNKAIELDPQNSLFWYNKGKTLYELGKQEESTKAYKESLEASENAIELDPRNSLAW 189

Query: 173 FNR-------GRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 225
           +N+       G Y +++  Y +A++++P    A     GL  Y  G   +A +A  + ++
Sbjct: 190 YNKGSALQELGNYQEAITAYNKAIEIYPEYKEAW-YKKGLAFYNSGNYEEAVKACNKTIE 248

Query: 226 LDPEN--VEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQ 283
           LDP+N  V A    A+  L + E A     +     + E+ P  ++A N L      +G 
Sbjct: 249 LDPQNPRVWANKGNALSKLNSYEEA-----ITAYNESIELDPQNSVAWNGLGFAVASSGN 303

Query: 284 HFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIF 343
           +    +    A+ +    P  S +  N   + ++ G+ E+A +  +    E+N P   + 
Sbjct: 304 YEEAIKFYNKAIEID---PQNSEALSNKGFALYNVGNREEA-IKALDKAIEVN-PQNAV- 357

Query: 344 PYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAA 403
            +Y  G +   LG++  A+  F+K  E+ P         G+    LG  ++A +   KA 
Sbjct: 358 AWYDKGSILKNLGNYEEAVEAFDKATELDPKKSSAWNNKGNALSSLGNYDEAIKAYDKAI 417

Query: 404 KIDPRDAQAFIDLG 417
           +IDP+D   + + G
Sbjct: 418 EIDPQDPGPWNNKG 431



 Score = 59.7 bits (143), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 64/300 (21%), Positives = 126/300 (42%), Gaps = 25/300 (8%)

Query: 124 DMHEPS-TWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSL 182
           D  +P  +W  KG  L   G  E++  A+   +E D +   A   +    F+   Y +++
Sbjct: 590 DSEDPEVSWNDKGLALYYSGNYEESVKAYDKAIELDPEYADAWFNKGNSFFSLKNYEEAI 649

Query: 183 EFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDL 242
           + Y +A+++ P    A     GL         +A +++ +A++L+ ++       A  + 
Sbjct: 650 KAYDKAIELKPQNSLAWN-NKGLALNNSSYYAEALKSYDKAIELNSQDS------AAWNN 702

Query: 243 QANEAAGI---RKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTN 299
           + N  + +      +    +A EI P  + A     N     G++       E A+   N
Sbjct: 703 KGNTLSSLYDYEGALNAYNKAVEINPQYSDAWYNKGNTLCSLGRY-------EEAVTAFN 755

Query: 300 H----GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKL 355
                 P  S ++ N   +  S G+YE+A   +  ++ EI+  +  I+   GL   +   
Sbjct: 756 KTLEIDPHNSFAWCNKGIALSSLGNYEEAMKSFDKAL-EIDSQNSLIWSNKGLALFEF-- 812

Query: 356 GDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFID 415
           G +  A+  + K +EI   N ET    G  +  +G  E+A +   K  ++DP  + A+ +
Sbjct: 813 GKYEEAVKAYNKTIEIDQSNTETWNNRGSAFFLIGNYEEAMKNYNKTIELDPEYSLAWYN 872



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 52/202 (25%), Positives = 84/202 (41%), Gaps = 23/202 (11%)

Query: 70  EIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPS 129
           EI+  Y+D  Y +   L +LG Y              EE    A   +NK   ID H   
Sbjct: 725 EINPQYSDAWYNKGNTLCSLGRY--------------EE----AVTAFNKTLEIDPHNSF 766

Query: 130 TWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRAL 189
            W  KG  L + G  E+A  +F   LE D  N      +    F  G+Y ++++ Y + +
Sbjct: 767 AWCNKGIALSSLGNYEEAMKSFDKALEIDSQNSLIWSNKGLALFEFGKYEEAVKAYNKTI 826

Query: 190 QVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAG 249
           ++  S         G   + +G   +A + + + ++LDPE   A    A +    N+   
Sbjct: 827 EIDQSNTETWN-NRGSAFFLIGNYEEAMKNYNKTIELDPEYSLAWYNRACLYSLINDK-- 883

Query: 250 IRKGMEKMQRAFEIYP-YCAMA 270
             + +  ++RA EI P Y  MA
Sbjct: 884 -EQSISDLKRAIEINPAYKEMA 904



 Score = 47.8 bits (112), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 49/219 (22%), Positives = 94/219 (42%), Gaps = 13/219 (5%)

Query: 109 HFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQ 168
           ++  A + Y+KA  ++  + + W  KG  L +  + E A +A+   +E +     A   +
Sbjct: 678 YYAEALKSYDKAIELNSQDSAAWNNKGNTLSSLYDYEGALNAYNKAVEINPQYSDAWYNK 737

Query: 169 ACVEFNRGRYSDSLEFYKRALQVHPSCPGA-IRLGIGLCRYKLGQLGKARQAFQRALQLD 227
                + GRY +++  + + L++ P    A    GI L    LG   +A ++F +AL++D
Sbjct: 738 GNTLCSLGRYEEAVTAFNKTLEIDPHNSFAWCNKGIALSS--LGNYEEAMKSFDKALEID 795

Query: 228 PEN--VEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 285
            +N  + +   LA+ +    E A     ++   +  EI        N   + FF  G + 
Sbjct: 796 SQNSLIWSNKGLALFEFGKYEEA-----VKAYNKTIEIDQSNTETWNNRGSAFFLIGNY- 849

Query: 286 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 324
             E+  +         P  S ++YN A  Y    D E++
Sbjct: 850 --EEAMKNYNKTIELDPEYSLAWYNRACLYSLINDKEQS 886


>gi|393234352|gb|EJD41916.1| hypothetical protein AURDEDRAFT_145951 [Auricularia delicata
            TFB-10046 SS5]
          Length = 1128

 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 126/530 (23%), Positives = 222/530 (41%), Gaps = 109/530 (20%)

Query: 450  VLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFH 509
            ++NN+  +   +G +E+A   ++DAL                   A A+ L         
Sbjct: 521  LVNNVAALRHAEGGYEAARTMYEDAL-------------------AVATALP-------- 553

Query: 510  RFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASV-------LYRLILFKYQDYVDAY 562
               ++G  +      V+VL+NL R LE + +   A V       +Y  +L ++ +YVDA 
Sbjct: 554  --SDEGEGI-----SVSVLYNLGRCLEDMEENGIAGVGYGAATEVYNKLLARHPEYVDAK 606

Query: 563  LRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKE-TFRAASD 621
            +RLA +    + +  + EL+ +AL  +    N  +   +  L+ + W  A++  F    D
Sbjct: 607  VRLAHMIANTHRMNEAHELLKQALASSPTALNLRAYYTNFLLRVNLWKPARDFAFTTLRD 666

Query: 622  ATDGKDSYATLSLGNWNYFAALRNEKRAPKLEAT--------HLEKAKELYTRVIVQHTS 673
              D  D YA  + G   Y  A R   R    +A         +  +A E + + + Q  +
Sbjct: 667  -CDKNDVYALCASGIVLYHNA-REAGRGFGGDAPMSSDERKKNFVRACEFFDKALQQDPA 724

Query: 674  NLYAANGAGVVLAEKG-------------QFDVSK------DLFTQVQEAASGSVFVQMP 714
               AA G  V LAE                FD S+      D+F +V+E+ +        
Sbjct: 725  CAVAAQGLAVALAEDALGTLCGALGPPPPSFDPSRAAREALDVFAKVRESLTDGA----- 779

Query: 715  DVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLL 774
             V+ N+ H Y+A+  F  A++ Y+   ++F+   +   LL L+R  Y A+  +D   + +
Sbjct: 780  -VYANMGHCYYARDEFDRAIESYETANKRFFEGRNVANLLCLSRAWY-AKANKDQSFAAM 837

Query: 775  R--------AIHLAPSNYTLRFDAGVAMQKFSAS--TLQKTRRTADEVRSTVAELENAVR 824
            R        A+H  P +  + ++  +  QK +     L+ +RRT  ++R  + + E+A  
Sbjct: 838  RTALKYAQQAMHCTPGDKAIMYNIAMIQQKAAEMLFGLEPSRRTLADLRRAIEQAEHAQS 897

Query: 825  VFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEAARQAA 884
            +F+ L AA N  +  +     +    Y   +L          ER E++  ++ +A RQ  
Sbjct: 898  LFASL-AADNSTMLPYSRDIADQRRRYGDTMLRKRVDQLADQERYEEEVGKKYDAVRQRR 956

Query: 885  LA-------------EEARRKAEEQKKYLLEKR---KLEDEQKRLRQQEE 918
            L              EE +R+AEE    L E+R   K E E+   R Q+E
Sbjct: 957  LEEQQRAAEEERVRQEEMKRRAEE----LAEQRRKAKAEVEEWASRMQDE 1002



 Score = 86.3 bits (212), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 99/383 (25%), Positives = 178/383 (46%), Gaps = 32/383 (8%)

Query: 8   VQNSEEEVRVALDQLPRDAS--DILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQILEE 65
           +++ EE + V +D L  DA+  + + +L+  +     W  +A EY+++G+++    + E 
Sbjct: 15  IRDGEELIEVNIDDL-EDAAPEEYIKLLEDTRCGASFWTRLAGEYWRRGQLDVAHMMCET 73

Query: 66  GSSPEIDEYYADVRYERIAIL------NALGVYYTYLGKIETKQREKEEHFILATQYYNK 119
             S ++D       Y  +A L       A  V        +   + K +H  LA    N+
Sbjct: 74  AIS-KLDRSTLGPVYAMLANLELALAQRAPKVILPDARADKLSGKTKPQHIDLANGLLNR 132

Query: 120 ASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYS 179
              +D+ E   ++ +G + LA    E+A   F  +L    +NV AL G+A + F R +++
Sbjct: 133 TGGLDVPETLLFLTRGIVQLAGRSYEEALRTFDGILAKQPNNVVALTGRARIYFQRRQFA 192

Query: 180 DSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQL-DPENVEALVALA 238
            +L+ ++R LQ+ P+     R+GIGLC + LG   KAR A+ R+L+L D     ALV L 
Sbjct: 193 QALKTFQRVLQLAPNSLPDPRIGIGLCLWSLGAREKARLAWARSLELHDGTYYPALVLLG 252

Query: 239 VMDLQANEAAGIRK---------GMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQ 289
           +  + A++   ++          G++ ++ AF++    A A N LA  F   G   L   
Sbjct: 253 LAAVNASKDVRLQPDERAQEYATGIKHVELAFKLNKASAAAANALAEMFLRKGPGALPTA 312

Query: 290 LTETALAVTNHGPTKS---HSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYY 346
           L  +   +  H  T S     +   AR+ H++G   +A  +Y     E   P   I    
Sbjct: 313 LKLSERTI-QHADTLSLLADGHMRAARALHAQGQLAEATKHY-----ERAPP---IIGAV 363

Query: 347 GLGQVQLKLGDFRSALTNFEKVL 369
           GL  + ++  ++ +A+   EK+L
Sbjct: 364 GLAAIHVQTQEYAAAIHVLEKIL 386


>gi|374851919|dbj|BAL54865.1| tetratricopeptide repeat domain protein [uncultured Acidobacteria
            bacterium]
          Length = 1230

 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 147/669 (21%), Positives = 269/669 (40%), Gaps = 107/669 (15%)

Query: 130  TWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVP-ALLGQACVEFNRGRYSDSLEFYKRA 188
            +W   G L   + ++++A++AF+  LEA     P A      V   +G    + + ++ A
Sbjct: 389  SWYELGHLFFLRKDLDRAAAAFRQALEAAGGTFPRARYNLGRVLHEKGELQAAADAFRHA 448

Query: 189  LQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLD----PENVEAL--VALAVMDL 242
            +  HP  P A    +     +LG+L  ARQA Q A++      PE    L  +A +  DL
Sbjct: 449  IAEHPHFPNA-HFNLARTLLELGELEAARQAIQTAIEQRERHFPEAYHLLGRIAYSRGDL 507

Query: 243  QANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGP 302
                A  I      + +  E YP    A   L   F   G+   +E+  E         P
Sbjct: 508  ----AEAIDAYQTAIHQRQEPYP---EAWRDLGLAFLVQGK---LEEAIEAYRRAIAACP 557

Query: 303  TK-SHSYYNLARSYHSKGDYEKAGLYYMASVKE--------INKPHEFIFPYYGLGQVQL 353
            T    +Y  L R+   KG         M ++ E        +    +F   +Y LG   L
Sbjct: 558  TPWPEAYLELGRALQQKG---------MDALPEAIEAFRQAVRARSDFPEAHYHLGCALL 608

Query: 354  KLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAF 413
              G++  A+ +  + +E  P+  E    LG   + LG++E+A E  R+A  + P    A+
Sbjct: 609  DAGEWEGAIQSLRQAIEQQPEFPEAYDHLGRALLHLGRVEEAIEAYRQALALRPDFVHAY 668

Query: 414  IDLG-ELLISSDTGAALDAFKTARTL---LKKAGEEVPIEVLN----------------- 452
              LG  L ++ +   A+ A + A  L   L +A  ++ + +L+                 
Sbjct: 669  HGLGVALYLNGELDEAIRALERALELKPDLPRAHHDLGVALLDRGEIERAIAAFQAAIQT 728

Query: 453  ----------NIGVIHFEKGEFESAHQSFKDAL------GDGIWLTLLDSKTKTYVIDAS 496
                      ++G  +F +G+ E A  +++ A+      G   +   L    +  V +A 
Sbjct: 729  AGRPYPEGYYDLGNAYFARGDLEQAIAAYRTAIEHKPDFGQAHYRLGLALWERGEVAEAR 788

Query: 497  ASMLQFKDMQLFHRFENDGNHVEL-PWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKY 555
            A+         FHR       +E+ P       ++L  +L +  +  AA    R  + + 
Sbjct: 789  AA---------FHRA------IEVEPQAFPQAYYSLGVMLLEHGELDAALEALRQAIAQC 833

Query: 556  QDYVDAYLRLAAIAKARNNLQLSIELVNEAL-KVNGKYPNALSMLGDLELKNDDWVKAKE 614
            + +  AY  L  +  A+  ++ +I     A+ + +G++P AL  LG+  ++  D  +A E
Sbjct: 834  ELFPLAYYSLGNVFLAQGRIEDAISAYRTAIEQSSGRFPEALWNLGNAYVRQGDITRAIE 893

Query: 615  TFRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSN 674
             +R A + T G+D              AL +      L+A   E+A+  + + +  H ++
Sbjct: 894  AYRQAIEQTGGRDP-------------ALHHNLGLVLLQAGEWEQAEASFRKALELHPND 940

Query: 675  LYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAM 734
              A    GV+   +G+ + +     Q  E  SG      P+   +L    + +G +A A 
Sbjct: 941  PEAHYYLGVLALGRGRLEEALRELRQALEQKSGP----FPEAHFDLGKALYEKGEYAAAA 996

Query: 735  KMYQNCLRK 743
            + +Q  L +
Sbjct: 997  REFQMALEQ 1005



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 147/673 (21%), Positives = 272/673 (40%), Gaps = 60/673 (8%)

Query: 126 HEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPAL---LGQACVEFNRGRYSDSL 182
           H P      G LL+ KG++E+A  AF+  +E      P     LG+A +   RGR  +++
Sbjct: 178 HSPDIHFQLGWLLMGKGDLEEAIEAFRTAIEQRGGVYPEAQYELGRALL--ARGRLEEAI 235

Query: 183 EFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDL 242
             ++  LQV+P+ P A    +G    + G L  AR+A + A++    N  A  A   + L
Sbjct: 236 TTFRTLLQVNPNHPEAY-FNLGRAYLRQGDLEAAREALETAIRQRGGNFAA--AHHQLGL 292

Query: 243 QANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGP 302
              +   + +      RA E  P+   A       ++  G+ +  +   E A+A  +   
Sbjct: 293 LLAQQGDVEQAAAAYHRAIEQNPFFPRA-------YYDLGRLYATQGAYEEAIAALSRAV 345

Query: 303 TKSHSYY-----NLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGD 357
            +   ++      LAR+  S G  E+A + ++  V  I + +E    +Y LG +     D
Sbjct: 346 EQRQGHFPEAELELARALASAGRLEEA-IAHLERV--IAQGYEVAESWYELGHLFFLRKD 402

Query: 358 FRSALTNFEKVLEIYPDNCETLK-ALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDL 416
              A   F + LE         +  LG +  + G+++ A +  R A    P    A  +L
Sbjct: 403 LDRAAAAFRQALEAAGGTFPRARYNLGRVLHEKGELQAAADAFRHAIAEHPHFPNAHFNL 462

Query: 417 GELLIS-SDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
              L+   +  AA  A +TA   +++     P E  + +G I + +G+   A  +++ A+
Sbjct: 463 ARTLLELGELEAARQAIQTA---IEQRERHFP-EAYHLLGRIAYSRGDLAEAIDAYQTAI 518

Query: 476 GDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLL 535
                    +   + +     A ++Q K  +    +         PW +  +   L R L
Sbjct: 519 HQ-----RQEPYPEAWRDLGLAFLVQGKLEEAIEAYRRAIAACPTPWPEAYL--ELGRAL 571

Query: 536 EQIH-DTVAASV-LYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYP 593
           +Q   D +  ++  +R  +    D+ +A+  L          + +I+ + +A++   ++P
Sbjct: 572 QQKGMDALPEAIEAFRQAVRARSDFPEAHYHLGCALLDAGEWEGAIQSLRQAIEQQPEFP 631

Query: 594 NALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRNEK-RAPKL 652
            A   LG   L      +A E +R A  A      +A   LG   Y     +E  RA   
Sbjct: 632 EAYDHLGRALLHLGRVEEAIEAYRQAL-ALRPDFVHAYHGLGVALYLNGELDEAIRA--- 687

Query: 653 EATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQ 712
               LE+A EL   +   H       +  GV L ++G+ + +   F    + A       
Sbjct: 688 ----LERALELKPDLPRAH-------HDLGVALLDRGEIERAIAAFQAAIQTAG----RP 732

Query: 713 MPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKS 772
            P+ + +L + YFA+G+   A+  Y+  +        A   L LA   +E  +  + + +
Sbjct: 733 YPEGYYDLGNAYFARGDLEQAIAAYRTAIEHKPDFGQAHYRLGLAL--WERGEVAEARAA 790

Query: 773 LLRAIHLAPSNYT 785
             RAI + P  + 
Sbjct: 791 FHRAIEVEPQAFP 803



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 74/299 (24%), Positives = 139/299 (46%), Gaps = 52/299 (17%)

Query: 128 PSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKR 187
           P  +   G    A+G++EQA +A++  +E   D            F +  Y         
Sbjct: 734 PEGYYDLGNAYFARGDLEQAIAAYRTAIEHKPD------------FGQAHY--------- 772

Query: 188 ALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENV-EALVALAVMDLQANE 246
                       RLG+ L  ++ G++ +AR AF RA++++P+   +A  +L VM L+  E
Sbjct: 773 ------------RLGLAL--WERGEVAEARAAFHRAIEVEPQAFPQAYYSLGVMLLEHGE 818

Query: 247 AAGIRKGMEKMQRAF---EIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPT 303
              +   +E +++A    E++P   +A   L N F   G+  + + ++    A+      
Sbjct: 819 ---LDAALEALRQAIAQCELFP---LAYYSLGNVFLAQGR--IEDAISAYRTAIEQSSGR 870

Query: 304 KSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALT 363
              + +NL  +Y  +GD  +A   Y  ++++       +  ++ LG V L+ G++  A  
Sbjct: 871 FPEALWNLGNAYVRQGDITRAIEAYRQAIEQTGGRDPAL--HHNLGLVLLQAGEWEQAEA 928

Query: 364 NFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKA--AKIDPRDAQAFIDLGELL 420
           +F K LE++P++ E    LG + +  G++E+A   LR+A   K  P   +A  DLG+ L
Sbjct: 929 SFRKALELHPNDPEAHYYLGVLALGRGRLEEALRELRQALEQKSGPFP-EAHFDLGKAL 986



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 109/522 (20%), Positives = 214/522 (40%), Gaps = 66/522 (12%)

Query: 141 KGEVEQASSAFKIVLEADRDNVPA---LLGQACVEFNRGRYSDSLEFYKRALQVHPSCPG 197
           +GE+E A +A +  ++  +   P    LLG+A   ++ G    ++  ++ A++  P  P 
Sbjct: 19  RGELEAAITALRTAIKQQQGRFPKAYFLLGRAL--YDAGDVERAIAAFRTAIEQQPQYPE 76

Query: 198 A-IRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEK 256
           A   LG+ L R   G+L +A  A++RA++    N     A   + L       + + +E 
Sbjct: 77  AHYYLGMALARR--GELEEAIAAYERAIEQTGGNHPG--AYHNLGLALFGKGEVERAIEA 132

Query: 257 MQRAFE----IYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLA 312
            ++A      ++P     L +   H   TG+  + E +     A+   G      ++ L 
Sbjct: 133 FRQAIAQRGGVFPRAHFHLGFALAH---TGR--IEEAIAAYRTAIEQSGGHSPDIHFQLG 187

Query: 313 RSYHSKGDYEKAGLYYMASVKEINKPHEFIFP--YYGLGQVQLKLGDFRSALTNFEKVLE 370
                KGD E+A   +  ++++       ++P   Y LG+  L  G    A+T F  +L+
Sbjct: 188 WLLMGKGDLEEAIEAFRTAIEQRGG----VYPEAQYELGRALLARGRLEEAITTFRTLLQ 243

Query: 371 IYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRD-AQAFIDLGELLISSDTGAAL 429
           + P++ E    LG  Y++ G +E A+E L  A +    + A A   LG LL         
Sbjct: 244 VNPNHPEAYFNLGRAYLRQGDLEAAREALETAIRQRGGNFAAAHHQLGLLLAQQGD---- 299

Query: 430 DAFKTARTLLKKAGEEVPI--EVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSK 487
              + A     +A E+ P       ++G ++  +G +E A  +   A+ +       +++
Sbjct: 300 --VEQAAAAYHRAIEQNPFFPRAYYDLGRLYATQGAYEEAIAALSRAV-EQRQGHFPEAE 356

Query: 488 TKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLF------------------ 529
            +     ASA  L+ + +    R    G  V   W ++  LF                  
Sbjct: 357 LELARALASAGRLE-EAIAHLERVIAQGYEVAESWYELGHLFFLRKDLDRAAAAFRQALE 415

Query: 530 -----------NLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLS 578
                      NL R+L +  +  AA+  +R  + ++  + +A+  LA        L+ +
Sbjct: 416 AAGGTFPRARYNLGRVLHEKGELQAAADAFRHAIAEHPHFPNAHFNLARTLLELGELEAA 475

Query: 579 IELVNEALKVNGK-YPNALSMLGDLELKNDDWVKAKETFRAA 619
            + +  A++   + +P A  +LG +     D  +A + ++ A
Sbjct: 476 RQAIQTAIEQRERHFPEAYHLLGRIAYSRGDLAEAIDAYQTA 517



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 133/558 (23%), Positives = 217/558 (38%), Gaps = 84/558 (15%)

Query: 95  YLGKIETKQREKEEHFILATQYYNKA-SRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKI 153
           YLG    ++ E EE    A   Y +A  +   + P  +   G  L  KGEVE+A  AF+ 
Sbjct: 80  YLGMALARRGELEE----AIAAYERAIEQTGGNHPGAYHNLGLALFGKGEVERAIEAFRQ 135

Query: 154 VLEADRDNV-PAL---LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYK 209
            + A R  V P     LG A    + GR  +++  Y+ A++        I   +G     
Sbjct: 136 AI-AQRGGVFPRAHFHLGFALA--HTGRIEEAIAAYRTAIEQSGGHSPDIHFQLGWLLMG 192

Query: 210 LGQLGKARQAFQRAL-QLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCA 268
            G L +A +AF+ A+ Q      EA   L    L       + + +   +   ++ P   
Sbjct: 193 KGDLEEAIEAFRTAIEQRGGVYPEAQYELGRALLARGR---LEEAITTFRTLLQVNPNHP 249

Query: 269 MALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYY 328
            A   L   +   G      +  ET  A+   G   + +++ L      +GD E+A   Y
Sbjct: 250 EAYFNLGRAYLRQGDLEAAREALET--AIRQRGGNFAAAHHQLGLLLAQQGDVEQAAAAY 307

Query: 329 MASVKEINKPHEFIFP--YYGLGQVQLKLGDFRSALTNFEKVLEI----YPD-NCETLKA 381
             ++++   P    FP  YY LG++    G +  A+    + +E     +P+   E  +A
Sbjct: 308 HRAIEQ--NP---FFPRAYYDLGRLYATQGAYEEAIAALSRAVEQRQGHFPEAELELARA 362

Query: 382 LGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGEL-LISSDTGAALDAFKTARTLLK 440
           L       G++E+A   L +        A+++ +LG L  +  D   A  AF+ A   L+
Sbjct: 363 L----ASAGRLEEAIAHLERVIAQGYEVAESWYELGHLFFLRKDLDRAAAAFRQA---LE 415

Query: 441 KAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASML 500
            AG   P     N+G +  EKGE ++A  +F+ A+ +                       
Sbjct: 416 AAGGTFP-RARYNLGRVLHEKGELQAAADAFRHAIAE----------------------- 451

Query: 501 QFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAA-SVLYRLILFKYQDYV 559
                           H   P       FNLAR L ++ +  AA   +   I  + + + 
Sbjct: 452 ----------------HPHFP----NAHFNLARTLLELGELEAARQAIQTAIEQRERHFP 491

Query: 560 DAYLRLAAIAKARNNLQLSIELVNEAL-KVNGKYPNALSMLGDLELKNDDWVKAKETFRA 618
           +AY  L  IA +R +L  +I+    A+ +    YP A   LG   L      +A E +R 
Sbjct: 492 EAYHLLGRIAYSRGDLAEAIDAYQTAIHQRQEPYPEAWRDLGLAFLVQGKLEEAIEAYRR 551

Query: 619 ASDATDGKDSYATLSLGN 636
           A  A       A L LG 
Sbjct: 552 AIAACPTPWPEAYLELGR 569


>gi|218783089|ref|YP_002434407.1| hypothetical protein Dalk_5269 [Desulfatibacillum alkenivorans
           AK-01]
 gi|218764473|gb|ACL06939.1| TPR repeat-containing protein [Desulfatibacillum alkenivorans
           AK-01]
          Length = 816

 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 95/385 (24%), Positives = 167/385 (43%), Gaps = 52/385 (13%)

Query: 128 PSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG----------- 176
           P  W   G   +AK    +A +AF+  LE D  +  AL   AC + + G           
Sbjct: 425 PRPWYNLGNAYMAKRMYTEAVTAFEKTLELDPGDPDALNNLACAQVSLGLLDEATANVRE 484

Query: 177 -----------------------RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQL 213
                                  R S+++ +Y  A+ + P  P A +  +G   YK+G  
Sbjct: 485 ALKTDPNSAVAYYNLGNAMAKSNRLSEAVMYYDMAVGLKPDFPMA-QCNLGYLLYKMGNP 543

Query: 214 GKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNY 273
            KAR+    AL LDPEN  AL+   + ++ + E   + +     Q+A E+ P  +     
Sbjct: 544 EKARERLSIALALDPEN--ALIQTVMANVLSAEG-DLEEARVHYQKALELEPDQSQIHYA 600

Query: 274 LANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK 333
             N     G+   V+Q  E   A   + P     + N+A +   +G Y +A  +Y  ++ 
Sbjct: 601 YGNLLSKLGE---VDQAEEQHRAALENDPEDPRFHANMANTLSRQGRYGEAMTHYHKAL- 656

Query: 334 EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIE 393
           E+   +  I  +  +G      G    A ++F+  ++  PD       +G++  + G+ +
Sbjct: 657 ELEPGNAMI--HTNMGIALADQGKVDEAASHFKAAMKSQPDFAPAYYNMGYVLAKQGRHQ 714

Query: 394 KAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP--IEVL 451
           +A E   KA +I P   QA+ + G  L  + TG   +A ++     KKA E+ P   ++L
Sbjct: 715 EALEYFSKAVEIKPDYGQAYYEAGNSL--AHTGHLNEAVQS----YKKALEQEPDNPKIL 768

Query: 452 NNIGVIHFEKGEFESAHQSFKDALG 476
           +N+G+++ + GE E+A   F+ AL 
Sbjct: 769 HNLGIVYAQGGELETAVDYFEKALA 793



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 93/343 (27%), Positives = 141/343 (41%), Gaps = 27/343 (7%)

Query: 71  IDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPST 130
           +DE  A+VR       N+   YY  LG    K     E    A  YY+ A  +    P  
Sbjct: 475 LDEATANVREALKTDPNSAVAYYN-LGNAMAKSNRLSE----AVMYYDMAVGLKPDFPMA 529

Query: 131 WVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQ 190
               G LL   G  E+A     I L  D +N       A V    G   ++   Y++AL+
Sbjct: 530 QCNLGYLLYKMGNPEKARERLSIALALDPENALIQTVMANVLSAEGDLEEARVHYQKALE 589

Query: 191 VHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGI 250
           + P     I    G    KLG++ +A +  + AL+ DPE+             AN A  +
Sbjct: 590 LEPDQ-SQIHYAYGNLLSKLGEVDQAEEQHRAALENDPEDPR---------FHANMANTL 639

Query: 251 -RKG-----MEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTK 304
            R+G     M    +A E+ P  AM    +       G+   V++      A     P  
Sbjct: 640 SRQGRYGEAMTHYHKALELEPGNAMIHTNMGIALADQGK---VDEAASHFKAAMKSQPDF 696

Query: 305 SHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTN 364
           + +YYN+      +G +++A L Y +   EI KP ++   YY  G      G    A+ +
Sbjct: 697 APAYYNMGYVLAKQGRHQEA-LEYFSKAVEI-KP-DYGQAYYEAGNSLAHTGHLNEAVQS 753

Query: 365 FEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 407
           ++K LE  PDN + L  LG +Y Q G++E A +   KA  + P
Sbjct: 754 YKKALEQEPDNPKILHNLGIVYAQGGELETAVDYFEKALALQP 796



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 76/314 (24%), Positives = 133/314 (42%), Gaps = 36/314 (11%)

Query: 173 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQ-------AFQRALQ 225
           F    + + ++ + RALQ  P  P           Y LG    A++       AF++ L+
Sbjct: 402 FQNSLWREPVKLWTRALQYVPDSPRP--------WYNLGNAYMAKRMYTEAVTAFEKTLE 453

Query: 226 LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 285
           LDP + +AL  LA   +       + +    ++ A +  P  A+A   L N    + +  
Sbjct: 454 LDPGDPDALNNLACAQVSLGL---LDEATANVREALKTDPNSAVAYYNLGNAMAKSNR-- 508

Query: 286 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAG--LYYMASVKEINKPHEFIF 343
           L E +    +AV    P    +  NL    +  G+ EKA   L    ++   N   + + 
Sbjct: 509 LSEAVMYYDMAV-GLKPDFPMAQCNLGYLLYKMGNPEKARERLSIALALDPENALIQTV- 566

Query: 344 PYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAA 403
               +  V    GD   A  +++K LE+ PD  +   A G++  +LG++++A+E  R A 
Sbjct: 567 ----MANVLSAEGDLEEARVHYQKALELEPDQSQIHYAYGNLLSKLGEVDQAEEQHRAAL 622

Query: 404 KIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVL--NNIGVIHFEK 461
           + DP D +   ++   L  S  G     +  A T   KA E  P   +   N+G+   ++
Sbjct: 623 ENDPEDPRFHANMANTL--SRQG----RYGEAMTHYHKALELEPGNAMIHTNMGIALADQ 676

Query: 462 GEFESAHQSFKDAL 475
           G+ + A   FK A+
Sbjct: 677 GKVDEAASHFKAAM 690


>gi|384208242|ref|YP_005593962.1| TPR domain-containing protein [Brachyspira intermedia PWS/A]
 gi|343385892|gb|AEM21382.1| putative TPR domain-containing protein [Brachyspira intermedia
           PWS/A]
          Length = 817

 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 140/709 (19%), Positives = 274/709 (38%), Gaps = 91/709 (12%)

Query: 100 ETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADR 159
           E ++ EK   +I    +YN  S         +  KG   L  G  E+A   F+  +E   
Sbjct: 17  ENREYEKSIEYIDKVIFYNGDSY------DLYHNKGLSKLNLGLYEEAIKDFERAIELGD 70

Query: 160 DNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQA 219
           D       +   +     Y +++E + R LQ++ +   + R+ +GLC   +    +A   
Sbjct: 71  DGETVYYDRGLAKLYLSFYGEAIEDFNRVLQINNNDIDS-RVNVGLCYLYMKNYKEAINI 129

Query: 220 FQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEI--YPYCAMALNYLANH 277
           +   +   P+N+ +     +     ++     + +    +  E+      +MA NY+   
Sbjct: 130 YDEVIADFPDNINSYNNRGLCKFYLSQ---FEEAINDFNKVIELDKNSTASMAYNYIGLC 186

Query: 278 FFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINK 337
            +   +     +  E A+ +    P   ++Y+N+A   HS G+++   L Y+    EI+ 
Sbjct: 187 KYHLDEITEALKYYEKAIEI---NPNLINAYHNIALIKHS-GEFDDEALSYLNKALEIDP 242

Query: 338 PHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQE 397
            +  +  Y  +  ++L L  +  A     K+LE+YPD+      +G+I +  G +E++ E
Sbjct: 243 GN--LETYLKIYSIKLDLELYDEANEYLNKILEMYPDDLYVYDRIGNIKIDAGYMEESLE 300

Query: 398 LLRKAAKIDPRDAQAFIDLGELL---------------------ISSDT-------GAAL 429
            L+KA +I+P    A+ D+   L                      S+DT         AL
Sbjct: 301 YLKKALEINPNFIDAYYDIAFALHKLDLNNEALEYLEKALQIYPNSADTYFKMFLVKRAL 360

Query: 430 DAFKTARTLLKKAGE--EVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSK 487
             ++ A + L K  E     + + N I +I  E   ++ A      A         LD  
Sbjct: 361 RDYEGALSCLNKILEIDNTDVVIYNEIALIKVELELYDEALSYLNKA---------LDID 411

Query: 488 TKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVL 547
           T    I  S  ++ +         +N    +EL  +  +  +N+     ++HD   +   
Sbjct: 412 TNNAEIYNSIGLVYYYKKDYEEAIKNFNKAIELNTSMASAYYNIGLAYYEMHDYENSIQY 471

Query: 548 YRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKND 607
           Y   L     Y  AY+ L  I     N + +I+   +AL++N  Y  A   +   E+  +
Sbjct: 472 YNKALEINPQYASAYINLGLIKHNLGNYKEAIDYYKKALEINPDYSLAYYNIALAEMSLE 531

Query: 608 DWVKAKETFRAASD-ATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTR 666
           D+  + E F  A +   D  + Y  + L                  +A + +KA E Y +
Sbjct: 532 DYKNSLEDFNKALELGYDEAEIYINIGL--------------IYSRQAIY-DKAIEYYNK 576

Query: 667 VIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFA 726
           V+  + + + A       L+   +++ + +++ +V     G+              VY+ 
Sbjct: 577 VLEINPNKVNAYYNIAFCLSNMDKYEETLEIYDKVIRMYPGNF------------DVYYE 624

Query: 727 QGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLR 775
           +G        Y+  +R F       I++ +   HY A  ++ C K  L+
Sbjct: 625 RGYTKYRASKYEEAIRDF------DIIINVNSKHYNAYYYRGCSKKYLK 667



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 93/446 (20%), Positives = 175/446 (39%), Gaps = 73/446 (16%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
           A  Y NKA  ID +    +   G +   K + E+A   F   +E +     A        
Sbjct: 400 ALSYLNKALDIDTNNAEIYNSIGLVYYYKKDYEEAIKNFNKAIELNTSMASAYYNIGLAY 459

Query: 173 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 232
           +    Y +S+++Y +AL+++P    A  + +GL ++ LG   +A   +++AL+++P+   
Sbjct: 460 YEMHDYENSIQYYNKALEINPQYASA-YINLGLIKHNLGNYKEAIDYYKKALEINPDYSL 518

Query: 233 AL--VALAVMDLQANEAAGIRKGMEKMQRAFEI-YPYCAMALNYLANHFFFTGQHFLVEQ 289
           A   +ALA M L+       +  +E   +A E+ Y    + +N         G  +  + 
Sbjct: 519 AYYNIALAEMSLE-----DYKNSLEDFNKALELGYDEAEIYIN--------IGLIYSRQA 565

Query: 290 LTETALAVTNH----GPTKSHSYYNLA--------------------RSYHSKGD--YEK 323
           + + A+   N      P K ++YYN+A                    R Y    D  YE+
Sbjct: 566 IYDKAIEYYNKVLEINPNKVNAYYNIAFCLSNMDKYEETLEIYDKVIRMYPGNFDVYYER 625

Query: 324 AGLYYMAS-----------VKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIY 372
               Y AS           +  +N  H   + Y G  +  LK  ++  A+ +F+K +E  
Sbjct: 626 GYTKYRASKYEEAIRDFDIIINVNSKHYNAYYYRGCSKKYLK--NYDEAIKDFDKAIEYN 683

Query: 373 PDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG--ELLISSDTGAALD 430
            +N +        Y  L +  ++ E   KA ++   D   +I     + L+S +T +  +
Sbjct: 684 ANNSDFYSERASCYDYLNKYRESIENYDKAIELKDDDWFLYILRAKEKFLLSKETNSE-N 742

Query: 431 AFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKT 490
                ++   K    +  ++ ++      EK       +S+K AL D  +L +     K 
Sbjct: 743 KTNDKKSFFNK----IISKIASSKNYTDLEKSALNDLEKSYKLALEDEFYLMVFKDIIKD 798

Query: 491 YVIDASASMLQFKDMQLFHRFENDGN 516
                     +F ++ L   F  D N
Sbjct: 799 ----------EFTNIDLAAEFCKDNN 814


>gi|118357165|ref|XP_001011832.1| DNA polymerase family B containing protein [Tetrahymena thermophila]
 gi|89293599|gb|EAR91587.1| DNA polymerase family B containing protein [Tetrahymena thermophila
            SB210]
          Length = 2315

 Score = 86.3 bits (212), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 95/377 (25%), Positives = 168/377 (44%), Gaps = 44/377 (11%)

Query: 132  VGKGQLLLAKGEVEQASSAFKIVLE--ADRDNVP-ALLGQACVEFNRGRYSDSLEFYKRA 188
            V KG+L L +G++E+A + F++ L+     D +   LLG     + +G++ D+L+ +  +
Sbjct: 1793 VDKGRLYLKQGKLEEAQNLFQLALKYYPKTDYLSHHLLG--FTFYQQGKFQDALQKFNES 1850

Query: 189  LQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAA 248
            LQ++P     I   IG    +     +A + +Q+AL++ P    AL+ L   +L   +  
Sbjct: 1851 LQINP-LQVDIYNTIGSIYDQQNMKDQAIKQYQKALEIQPSYYTALLNLG--NLYFWDKN 1907

Query: 249  GIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSY 308
             +++  E  Q+A +I P     L   A  ++   Q     Q  E AL++    P     +
Sbjct: 1908 MVKEANECFQKALDINPNSLQVLKRAALFYYSNNQFQEAIQNYEKALSI---DPQDYEIF 1964

Query: 309  YNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKV 368
              LA+ YH  G+ +KA      ++K+  + H+F   +Y LG    ++G    A+  +   
Sbjct: 1965 GCLAQVYHQIGNIQKAIKILEKAIKQNPRNHQF---HYDLGNYSSEVGLKNEAIQCYLNA 2021

Query: 369  LEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS------ 422
            LEI P+  + L  LG  Y+ + ++E+AQ    K  +  P+D  A I L  L I       
Sbjct: 2022 LEINPEFYQALNNLGGEYIFMERLEEAQSCFLKILETYPQDFNALIQLVVLCIERGMIEE 2081

Query: 423  ----------------------SDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIGVIH 458
                                  +    AL   + A    +KA +  P  ++VL+NI ++H
Sbjct: 2082 AKDYLQKCLLNNNLDYDACNGIAQCYEALGMIEEAIFWCEKALKINPNSVDVLSNIALLH 2141

Query: 459  FEKGEFESAHQSFKDAL 475
            F  G  E +   F+  L
Sbjct: 2142 FMNGNTEESKICFEKTL 2158



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 90/355 (25%), Positives = 149/355 (41%), Gaps = 50/355 (14%)

Query: 113  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDN-----VPALLG 167
            A Q Y KA  ID   P  +   G L     ++     A KI+ +A + N         LG
Sbjct: 1946 AIQNYEKALSID---PQDYEIFGCLAQVYHQIGNIQKAIKILEKAIKQNPRNHQFHYDLG 2002

Query: 168  QACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLD 227
                E   G  +++++ Y  AL+++P    A+   +G     + +L +A+  F + L+  
Sbjct: 2003 NYSSEV--GLKNEAIQCYLNALEINPEFYQALN-NLGGEYIFMERLEEAQSCFLKILETY 2059

Query: 228  PENVEALVALAVM---------------------DLQANEAAGIRKGMEKM--------- 257
            P++  AL+ L V+                     +L  +   GI +  E +         
Sbjct: 2060 PQDFNALIQLVVLCIERGMIEEAKDYLQKCLLNNNLDYDACNGIAQCYEALGMIEEAIFW 2119

Query: 258  -QRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYH 316
             ++A +I P     L+ +A   F  G     +   E  L +    P  S++  NL   Y+
Sbjct: 2120 CEKALKINPNSVDVLSNIALLHFMNGNTEESKICFEKTLKIK---PDHSYALTNLGFIYY 2176

Query: 317  SKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNC 376
             +GDY KA  +Y  S+ EI+      F    LG +    G    A   +EK L+I P+  
Sbjct: 2177 LQGDYSKAISFYQQSI-EIDPSMHHGFN--NLGLIYQHQGLAEQAKQQYEKALQILPNFA 2233

Query: 377  ETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDA 431
            + L  LG IY + G+IE A E  +KA ++DP+  + +  LG   I    G  ++A
Sbjct: 2234 QALNNLGSIYYKNGKIEDAIEYYKKAQQVDPQFLEPYKSLG--YIYQKIGMVVEA 2286



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 87/400 (21%), Positives = 171/400 (42%), Gaps = 36/400 (9%)

Query: 86   LNALGV-YYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLL-AKGE 143
            +N L V  Y  +G I  +Q  K++    A + Y KA  I     +  +  G L    K  
Sbjct: 1853 INPLQVDIYNTIGSIYDQQNMKDQ----AIKQYQKALEIQPSYYTALLNLGNLYFWDKNM 1908

Query: 144  VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGI 203
            V++A+  F+  L+ + +++  L   A   ++  ++ ++++ Y++AL + P     I   +
Sbjct: 1909 VKEANECFQKALDINPNSLQVLKRAALFYYSNNQFQEAIQNYEKALSIDPQ-DYEIFGCL 1967

Query: 204  GLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEI 263
                +++G + KA +  ++A++ +P N +    L      ++E     + ++    A EI
Sbjct: 1968 AQVYHQIGNIQKAIKILEKAIKQNPRNHQFHYDLGNY---SSEVGLKNEAIQCYLNALEI 2024

Query: 264  YPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEK 323
             P    ALN L   + F  +   +E+     L +    P   ++   L      +G  E+
Sbjct: 2025 NPEFYQALNNLGGEYIFMER---LEEAQSCFLKILETYPQDFNALIQLVVLCIERGMIEE 2081

Query: 324  AGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALG 383
            A  Y    +   N  ++      G+ Q    LG    A+   EK L+I P++ + L  + 
Sbjct: 2082 AKDYLQKCLLNNNLDYD---ACNGIAQCYEALGMIEEAIFWCEKALKINPNSVDVLSNIA 2138

Query: 384  HIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL-ISSDTGAALDAFKTARTLLKKA 442
             ++   G  E+++    K  KI P  + A  +LG +  +  D   A+  ++ +       
Sbjct: 2139 LLHFMNGNTEESKICFEKTLKIKPDHSYALTNLGFIYYLQGDYSKAISFYQQS------- 2191

Query: 443  GEEVPIEV-------LNNIGVIHFEKGEFESAHQSFKDAL 475
                 IE+        NN+G+I+  +G  E A Q ++ AL
Sbjct: 2192 -----IEIDPSMHHGFNNLGLIYQHQGLAEQAKQQYEKAL 2226



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/275 (21%), Positives = 121/275 (44%), Gaps = 20/275 (7%)

Query: 144  VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGI 203
            +E+A S F  +LE    +  AL+    +   RG   ++ ++ ++ L  +     A   GI
Sbjct: 2045 LEEAQSCFLKILETYPQDFNALIQLVVLCIERGMIEEAKDYLQKCLLNNNLDYDACN-GI 2103

Query: 204  GLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEI 263
              C   LG + +A    ++AL+++P +V+ L  +A++          +   EK     +I
Sbjct: 2104 AQCYEALGMIEEAIFWCEKALKINPNSVDVLSNIALLHFMNGNTEESKICFEK---TLKI 2160

Query: 264  YPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEK 323
             P  + AL  L   ++  G +       + ++ +    P+  H + NL   Y  +G  E+
Sbjct: 2161 KPDHSYALTNLGFIYYLQGDYSKAISFYQQSIEI---DPSMHHGFNNLGLIYQHQGLAEQ 2217

Query: 324  AGLYYMASVKEINKPHEFIFPYY-----GLGQVQLKLGDFRSALTNFEKVLEIYPDNCET 378
            A   Y  +++        I P +      LG +  K G    A+  ++K  ++ P   E 
Sbjct: 2218 AKQQYEKALQ--------ILPNFAQALNNLGSIYYKNGKIEDAIEYYKKAQQVDPQFLEP 2269

Query: 379  LKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAF 413
             K+LG+IY ++G + +A+ +L +  ++     + F
Sbjct: 2270 YKSLGYIYQKIGMVVEAKNMLDQLTQLKQNQQKIF 2304


>gi|118354513|ref|XP_001010518.1| TPR Domain containing protein [Tetrahymena thermophila]
 gi|89292285|gb|EAR90273.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
          Length = 1619

 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 138/640 (21%), Positives = 256/640 (40%), Gaps = 62/640 (9%)

Query: 113  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
            A QYY +   I+ ++ S +   G    AKG  ++A  +++  LE +  N           
Sbjct: 969  AIQYYLQCLEINPNKDSCYQNLGNAYKAKGLYDEAIKSYQQCLEINPQNYGCYENLGIAY 1028

Query: 173  FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 232
              +G   ++++ Y++ L+++P+   +    +G   Y+ G   +A Q++Q+ L+++P+N  
Sbjct: 1029 NEKGLQDEAIQSYQKCLEINPN-KDSCYNNLGNAYYEKGFQDEAIQSYQKCLEINPKNEG 1087

Query: 233  ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTE 292
                L +     NE     + ++  Q+  EI P      N L N +   G      +  +
Sbjct: 1088 CYNNLGIA---YNEKGLQDEAIQSYQKYLEINPKNDACYNNLGNAYQAKGLQDEAIKQYQ 1144

Query: 293  TALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQ 352
              L +    P     Y NL  +Y+ KG  ++A   Y   + E+N   +    YY LG   
Sbjct: 1145 KCLEIN---PKNEGCYENLGNAYNQKGLQDEAIQSYQKCL-EMNPNKDSC--YYNLGNAY 1198

Query: 353  LKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQA 412
               G    A+ +++K LEI   N      LG  Y +LG  ++A +  +K  +I+P +   
Sbjct: 1199 KAKGLLDEAIKSYQKCLEINSKNGGCYGNLGIAYNELGLQDEAIQSYQKYLEINPENDVC 1258

Query: 413  FIDLGELLISSDTGAALD-AFKTARTLLKKAGEEVPIE---VLNNIGVIHFEKGEFESAH 468
            + +LG    +  T   LD A K+ +  L     E+ ++      N+G+ + EKG  + A 
Sbjct: 1259 YNNLGN---AYKTKGLLDEAIKSYQKCL-----EINLKNDGCYENLGIAYNEKGLQDEAI 1310

Query: 469  QSFKDAL-----GDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWN 523
            QS++  L      D  +  L         I      LQ + +Q + +        E  +N
Sbjct: 1311 QSYQKCLEINPKNDICYNNL--------GIAYYEKGLQDEAIQSYQKCLEINPKNEGCYN 1362

Query: 524  KVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVN 583
             + +++N   L     D    S    L +   +D    Y  L    KA+  L  +I    
Sbjct: 1363 NLGIVYNEKGL----QDEAIQSYEKCLEINPTKD--SCYNNLGNTYKAKGLLDEAINSYQ 1416

Query: 584  EALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKD-SYATLSLGNWNYFAA 642
            + L++N K       LG    +     +A ++++   +     D  Y  L +  +     
Sbjct: 1417 KCLEINPKNDGCHENLGIAYNEKGLLDEAIKSYQKCLEINPKNDVCYKNLGIAYY----- 1471

Query: 643  LRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQ 702
                      E   L++A + Y + +  +  N    N  G+   EKG  D +   + +  
Sbjct: 1472 ----------EIGLLDEAIQSYQKCLEINPKNDVCYNNLGIAYNEKGLQDEAIQSYQKYL 1521

Query: 703  EAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLR 742
            E    +        + NL + Y+ +G    A++ YQ CL 
Sbjct: 1522 EMNPKNDV-----CYNNLGNAYYEKGLHDEAIQSYQKCLE 1556



 Score = 79.7 bits (195), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 92/401 (22%), Positives = 168/401 (41%), Gaps = 56/401 (13%)

Query: 113  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEAD--RDNVPALLG--- 167
            A Q Y K  +I     S +   G    AKG +++A  ++++ LE +   D     LG   
Sbjct: 731  AIQSYQKCLKISPKNDSCYNNLGNAYKAKGYLDEAIQSYQLCLEINPKNDCCHENLGITY 790

Query: 168  -------------QACVEFN----------------RGRYSDSLEFYKRALQVHPSCPGA 198
                         Q C+E N                +G   ++++ Y++ L+ +P     
Sbjct: 791  NEKDLHDDAIQSYQKCLEINPNIDSFYYNLGNAYKAKGLLDEAIKSYQKCLETNPK-NNF 849

Query: 199  IRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQ 258
                +G+   + G   +A Q++Q+ L+++P N    V    + +  N+     + ++  Q
Sbjct: 850  CYNNLGIAYNEKGLHDEAIQSYQKCLEINPNND---VCYNNLGIAYNQKGLQDEAIQSYQ 906

Query: 259  RAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSK 318
            +  EI P   +  N L N +   G H    Q  +  L +    P     + NL  +Y+ K
Sbjct: 907  KYLEINPKDDVCYNNLGNAYKGKGLHDEAIQSYQKCLEIN---PKNDGCHENLGIAYNEK 963

Query: 319  GDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCET 378
            G  ++A  YY+  + EIN   +    Y  LG      G +  A+ ++++ LEI P N   
Sbjct: 964  GLQDEAIQYYLQCL-EINPNKDSC--YQNLGNAYKAKGLYDEAIKSYQQCLEINPQNYGC 1020

Query: 379  LKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTL 438
             + LG  Y + G  ++A +  +K  +I+P     + +LG      + G   +A ++ +  
Sbjct: 1021 YENLGIAYNEKGLQDEAIQSYQKCLEINPNKDSCYNNLGNAYY--EKGFQDEAIQSYQKC 1078

Query: 439  L----KKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
            L    K  G        NN+G+ + EKG  + A QS++  L
Sbjct: 1079 LEINPKNEG------CYNNLGIAYNEKGLQDEAIQSYQKYL 1113



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 86/364 (23%), Positives = 164/364 (45%), Gaps = 16/364 (4%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
           A Q Y K  +I+ ++ S +   G   LAKG  ++A  +++  LE +  N           
Sbjct: 595 AIQSYQKFIKINPNKDSCYQNLGNAYLAKGLQDEAIQSYQQCLEINPQNYGCYENLGIAY 654

Query: 173 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 232
             +G   ++++ Y++ L+++P+   +    +G      G L +A Q++Q+ L+++P+N  
Sbjct: 655 NEKGLQDEAIQSYQKYLEINPN-KDSCYQNLGNAYKAKGLLNEAIQSYQQCLKINPKNDG 713

Query: 233 ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTE 292
               L +      E   + + ++  Q+  +I P      N L N +   G  +L E +  
Sbjct: 714 CHENLGIAQY---EKGLLDEAIQSYQKCLKISPKNDSCYNNLGNAYKAKG--YLDEAIQS 768

Query: 293 TALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQ 352
             L +    P     + NL  +Y+ K  ++ A   Y   + EIN P+   F YY LG   
Sbjct: 769 YQLCLE-INPKNDCCHENLGITYNEKDLHDDAIQSYQKCL-EIN-PNIDSF-YYNLGNAY 824

Query: 353 LKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQA 412
              G    A+ +++K LE  P N      LG  Y + G  ++A +  +K  +I+P +   
Sbjct: 825 KAKGLLDEAIKSYQKCLETNPKNNFCYNNLGIAYNEKGLHDEAIQSYQKCLEINPNNDVC 884

Query: 413 FIDLGELLISSDTGAALDAFKTARTLLK-KAGEEVPIEVLNNIGVIHFEKGEFESAHQSF 471
           + +LG  +  +  G   +A ++ +  L+    ++V     NN+G  +  KG  + A QS+
Sbjct: 885 YNNLG--IAYNQKGLQDEAIQSYQKYLEINPKDDV---CYNNLGNAYKGKGLHDEAIQSY 939

Query: 472 KDAL 475
           +  L
Sbjct: 940 QKCL 943



 Score = 73.2 bits (178), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 140/642 (21%), Positives = 257/642 (40%), Gaps = 66/642 (10%)

Query: 113  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEAD--RDNVPALLGQAC 170
            A Q Y K   I+  +   +   G     KG  ++A  +++  LE +   D     LG A 
Sbjct: 901  AIQSYQKYLEINPKDDVCYNNLGNAYKGKGLHDEAIQSYQKCLEINPKNDGCHENLGIAY 960

Query: 171  VEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPEN 230
             E  +G   +++++Y + L+++P+   +    +G      G   +A +++Q+ L+++P+N
Sbjct: 961  NE--KGLQDEAIQYYLQCLEINPN-KDSCYQNLGNAYKAKGLYDEAIKSYQQCLEINPQN 1017

Query: 231  VEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQL 290
                  L +     NE     + ++  Q+  EI P      N L N ++  G      Q 
Sbjct: 1018 YGCYENLGIA---YNEKGLQDEAIQSYQKCLEINPNKDSCYNNLGNAYYEKGFQDEAIQS 1074

Query: 291  TETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQ 350
             +  L +    P     Y NL  +Y+ KG  ++A   Y   + EIN  ++    Y  LG 
Sbjct: 1075 YQKCLEIN---PKNEGCYNNLGIAYNEKGLQDEAIQSYQKYL-EINPKNDAC--YNNLGN 1128

Query: 351  VQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDA 410
                 G    A+  ++K LEI P N    + LG+ Y Q G  ++A +  +K  +++P   
Sbjct: 1129 AYQAKGLQDEAIKQYQKCLEINPKNEGCYENLGNAYNQKGLQDEAIQSYQKCLEMNPNKD 1188

Query: 411  QAFIDLGELLISSDTGAALDAFKTARTLL----KKAGEEVPIEVLNNIGVIHFEKGEFES 466
              + +LG    +   G   +A K+ +  L    K  G         N+G+ + E G  + 
Sbjct: 1189 SCYYNLGNAYKA--KGLLDEAIKSYQKCLEINSKNGG------CYGNLGIAYNELGLQDE 1240

Query: 467  AHQSFKDAL-----GDGIWLTLLDS-KTKTYVIDASASMLQFKDMQLFHRFENDGNHVEL 520
            A QS++  L      D  +  L ++ KTK  + +A  S  +  ++ L    +NDG     
Sbjct: 1241 AIQSYQKYLEINPENDVCYNNLGNAYKTKGLLDEAIKSYQKCLEINL----KNDG----- 1291

Query: 521  PWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIE 580
             +  + + +N   L     D    S    L +    D     L +A   K   +   +I+
Sbjct: 1292 CYENLGIAYNEKGL----QDEAIQSYQKCLEINPKNDICYNNLGIAYYEKGLQDE--AIQ 1345

Query: 581  LVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYF 640
               + L++N K     + LG +  +     +A +++    +    KDS           +
Sbjct: 1346 SYQKCLEINPKNEGCYNNLGIVYNEKGLQDEAIQSYEKCLEINPTKDSC----------Y 1395

Query: 641  AALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQ 700
              L N  +A  L    L++A   Y + +  +  N       G+   EKG  D +   + +
Sbjct: 1396 NNLGNTYKAKGL----LDEAINSYQKCLEINPKNDGCHENLGIAYNEKGLLDEAIKSYQK 1451

Query: 701  VQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLR 742
              E     +  +    + NL   Y+  G    A++ YQ CL 
Sbjct: 1452 CLE-----INPKNDVCYKNLGIAYYEIGLLDEAIQSYQKCLE 1488



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 68/306 (22%), Positives = 134/306 (43%), Gaps = 10/306 (3%)

Query: 113  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
            A Q Y K   I+      +   G     KG  ++A  +++  LE +  N         V 
Sbjct: 1309 AIQSYQKCLEINPKNDICYNNLGIAYYEKGLQDEAIQSYQKCLEINPKNEGCYNNLGIVY 1368

Query: 173  FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 232
              +G   ++++ Y++ L+++P+   +    +G      G L +A  ++Q+ L+++P+N  
Sbjct: 1369 NEKGLQDEAIQSYEKCLEINPT-KDSCYNNLGNTYKAKGLLDEAINSYQKCLEINPKNDG 1427

Query: 233  ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTE 292
                L +     NE   + + ++  Q+  EI P   +    L   ++  G   L+++  +
Sbjct: 1428 CHENLGIA---YNEKGLLDEAIKSYQKCLEINPKNDVCYKNLGIAYYEIG---LLDEAIQ 1481

Query: 293  TALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQ 352
            +        P     Y NL  +Y+ KG  ++A   Y   + E+N  ++    Y  LG   
Sbjct: 1482 SYQKCLEINPKNDVCYNNLGIAYNEKGLQDEAIQSYQKYL-EMNPKNDVC--YNNLGNAY 1538

Query: 353  LKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQA 412
             + G    A+ +++K LEI P N   L+ LG  Y   G ++ A +  +K  +I+P     
Sbjct: 1539 YEKGLHDEAIQSYQKCLEINPKNDGCLENLGVAYKAKGLLDAAIKSYQKCLEINPDKDSC 1598

Query: 413  FIDLGE 418
            + +LG+
Sbjct: 1599 YYNLGK 1604



 Score = 66.2 bits (160), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 124/626 (19%), Positives = 244/626 (38%), Gaps = 98/626 (15%)

Query: 178 YSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVAL 237
           +S++++ Y++ L+++P    A    +G+   + G   +A Q++Q+ L+++ +N      L
Sbjct: 354 FSEAIQSYQKCLEINPK-NDACHENLGITYNEKGLQDEAIQSYQKCLEINSKNGGCYGNL 412

Query: 238 AVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAV 297
            +     N+     + ++  Q+  EI P      N L N +   G   L+++  ++    
Sbjct: 413 GIA---YNQKGLQDEAIQSYQKCLEINPKNDDCYNNLGNSYKIKG---LLDKAIKSYRKC 466

Query: 298 TNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGD 357
               P     + NL  +Y+ K D +   +       EIN   +    YY LG      G 
Sbjct: 467 LKINPKNDICHENLGIAYNEK-DLQDEAIQSYQKCLEINPNKDSC--YYNLGNAYKAEGL 523

Query: 358 FRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 417
              A+ +++K L+I P N      LG  Y + G +++A +  +K  +I+P++   + +LG
Sbjct: 524 LDEAIQSYQKCLKINPKNNFCYNNLGIAYNEKGLLDEAIQSYQKCLEINPQNYVCYNNLG 583

Query: 418 ELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL-- 475
             +  +  G   +A ++ +  +K    +       N+G  +  KG  + A QS++  L  
Sbjct: 584 --IAYNQKGLQDEAIQSYQKFIKINPNKDS--CYQNLGNAYLAKGLQDEAIQSYQQCLEI 639

Query: 476 ---GDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLA 532
                G +  L         I  +   LQ + +Q + ++      +E+  NK +      
Sbjct: 640 NPQNYGCYENL--------GIAYNEKGLQDEAIQSYQKY------LEINPNKDSC----- 680

Query: 533 RLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKY 592
                                 YQ+  +AY       KA+  L  +I+   + LK+N K 
Sbjct: 681 ----------------------YQNLGNAY-------KAKGLLNEAIQSYQQCLKINPKN 711

Query: 593 PNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKL 652
                 LG  + +     +A ++++     +   DS           +  L N  +A   
Sbjct: 712 DGCHENLGIAQYEKGLLDEAIQSYQKCLKISPKNDS----------CYNNLGNAYKA--- 758

Query: 653 EATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQ 712
              +L++A + Y   +  +  N       G+   EK   D+  D     Q+     +   
Sbjct: 759 -KGYLDEAIQSYQLCLEINPKNDCCHENLGITYNEK---DLHDDAIQSYQKCL--EINPN 812

Query: 713 MPDVWINLAHVYFAQGNFALAMKMYQNCL-----RKFYYNTDAQILLYLARTHYEAEQWQ 767
           +   + NL + Y A+G    A+K YQ CL       F YN        L   + E     
Sbjct: 813 IDSFYYNLGNAYKAKGLLDEAIKSYQKCLETNPKNNFCYNN-------LGIAYNEKGLHD 865

Query: 768 DCKKSLLRAIHLAPSNYTLRFDAGVA 793
           +  +S  + + + P+N     + G+A
Sbjct: 866 EAIQSYQKCLEINPNNDVCYNNLGIA 891



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 85/394 (21%), Positives = 161/394 (40%), Gaps = 42/394 (10%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
           A Q Y K   I+ ++ S +   G    A+G +++A  +++  L+ +  N           
Sbjct: 493 AIQSYQKCLEINPNKDSCYYNLGNAYKAEGLLDEAIQSYQKCLKINPKNNFCYNNLGIAY 552

Query: 173 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 232
             +G   ++++ Y++ L+++P         +G+   + G   +A Q++Q+ ++++P    
Sbjct: 553 NEKGLLDEAIQSYQKCLEINPQ-NYVCYNNLGIAYNQKGLQDEAIQSYQKFIKINPNKDS 611

Query: 233 ALVALAVMDLQANEAAGIR-KGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLT 291
               L    L    A G++ + ++  Q+  EI P        L   +   G      Q  
Sbjct: 612 CYQNLGNAYL----AKGLQDEAIQSYQQCLEINPQNYGCYENLGIAYNEKGLQDEAIQSY 667

Query: 292 ETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQV 351
           +  L +    P K   Y NL  +Y +KG   +A   Y   +K IN  ++       LG  
Sbjct: 668 QKYLEIN---PNKDSCYQNLGNAYKAKGLLNEAIQSYQQCLK-INPKNDGCHE--NLGIA 721

Query: 352 QLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQ 411
           Q + G    A+ +++K L+I P N      LG+ Y   G +++A +  +   +I+P++  
Sbjct: 722 QYEKGLLDEAIQSYQKCLKISPKNDSCYNNLGNAYKAKGYLDEAIQSYQLCLEINPKNDC 781

Query: 412 AFIDLGELLISSD--------------TGAALDAF-------KTARTLL-------KKAG 443
              +LG      D                  +D+F         A+ LL       +K  
Sbjct: 782 CHENLGITYNEKDLHDDAIQSYQKCLEINPNIDSFYYNLGNAYKAKGLLDEAIKSYQKCL 841

Query: 444 EEVPIE--VLNNIGVIHFEKGEFESAHQSFKDAL 475
           E  P      NN+G+ + EKG  + A QS++  L
Sbjct: 842 ETNPKNNFCYNNLGIAYNEKGLHDEAIQSYQKCL 875



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 55/239 (23%), Positives = 102/239 (42%), Gaps = 39/239 (16%)

Query: 113  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEAD--RDNVPALLGQAC 170
            A Q Y K   I+  + S +   G    AKG +++A ++++  LE +   D     LG A 
Sbjct: 1377 AIQSYEKCLEINPTKDSCYNNLGNTYKAKGLLDEAINSYQKCLEINPKNDGCHENLGIAY 1436

Query: 171  VEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPEN 230
             E  +G   ++++ Y++ L+++P         +G+  Y++G L +A Q++Q+ L+++P+N
Sbjct: 1437 NE--KGLLDEAIKSYQKCLEINPK-NDVCYKNLGIAYYEIGLLDEAIQSYQKCLEINPKN 1493

Query: 231  VEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQL 290
                V    + +  NE     + ++  Q+  E+ P   +  N L N ++  G H    Q 
Sbjct: 1494 D---VCYNNLGIAYNEKGLQDEAIQSYQKYLEMNPKNDVCYNNLGNAYYEKGLHDEAIQS 1550

Query: 291  TETALAVT--NHG-----------------------------PTKSHSYYNLARSYHSK 318
             +  L +   N G                             P K   YYNL ++Y  K
Sbjct: 1551 YQKCLEINPKNDGCLENLGVAYKAKGLLDAAIKSYQKCLEINPDKDSCYYNLGKAYWMK 1609



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 62/276 (22%), Positives = 120/276 (43%), Gaps = 14/276 (5%)

Query: 113  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEAD--RDNVPALLGQAC 170
            A Q Y K   I+      +   G +   KG  ++A  +++  LE +  +D+    LG   
Sbjct: 1343 AIQSYQKCLEINPKNEGCYNNLGIVYNEKGLQDEAIQSYEKCLEINPTKDSCYNNLGNTY 1402

Query: 171  VEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPEN 230
                +G   +++  Y++ L+++P   G     +G+   + G L +A +++Q+ L+++P+N
Sbjct: 1403 KA--KGLLDEAINSYQKCLEINPKNDGC-HENLGIAYNEKGLLDEAIKSYQKCLEINPKN 1459

Query: 231  VEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQL 290
                V    + +   E   + + ++  Q+  EI P   +  N L   +   G   L ++ 
Sbjct: 1460 D---VCYKNLGIAYYEIGLLDEAIQSYQKCLEINPKNDVCYNNLGIAYNEKG---LQDEA 1513

Query: 291  TETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQ 350
             ++        P     Y NL  +Y+ KG +++A   Y   + EIN  ++       LG 
Sbjct: 1514 IQSYQKYLEMNPKNDVCYNNLGNAYYEKGLHDEAIQSYQKCL-EINPKNDGCLE--NLGV 1570

Query: 351  VQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIY 386
                 G   +A+ +++K LEI PD       LG  Y
Sbjct: 1571 AYKAKGLLDAAIKSYQKCLEINPDKDSCYYNLGKAY 1606



 Score = 43.5 bits (101), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 33/131 (25%), Positives = 68/131 (51%), Gaps = 4/131 (3%)

Query: 345 YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAK 404
           ++ LGQ+Q +L  F  A+ +++K LEI P N    + LG  Y + G  ++A +  +K  +
Sbjct: 341 WFELGQIQHELKYFSEAIQSYQKCLEINPKNDACHENLGITYNEKGLQDEAIQSYQKCLE 400

Query: 405 IDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEF 464
           I+ ++   + +LG  +  +  G   +A ++ +  L+   +    +  NN+G  +  KG  
Sbjct: 401 INSKNGGCYGNLG--IAYNQKGLQDEAIQSYQKCLEINPKND--DCYNNLGNSYKIKGLL 456

Query: 465 ESAHQSFKDAL 475
           + A +S++  L
Sbjct: 457 DKAIKSYRKCL 467


>gi|355570991|ref|ZP_09042261.1| Tetratricopeptide TPR_1 repeat-containing protein [Methanolinea
           tarda NOBI-1]
 gi|354826273|gb|EHF10489.1| Tetratricopeptide TPR_1 repeat-containing protein [Methanolinea
           tarda NOBI-1]
          Length = 1104

 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 88/309 (28%), Positives = 145/309 (46%), Gaps = 26/309 (8%)

Query: 117 YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNR- 175
           +++A  ID      ++G+GQ     G+ E+A   +   +  +  +V AL  +A  E++R 
Sbjct: 633 FSRALEIDPRLFDAYIGRGQERSRCGQPEKAVEDYSNAIRLNGRSVEALTARAT-EYSRL 691

Query: 176 GRYSDSLEFYKRALQVHPSCPG--AIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEA 233
           GRY D++E   RAL+     PG  +I L  GL   +LG + +A   + + +++DP + +A
Sbjct: 692 GRYEDAVEDLSRALE---QAPGDVSILLARGLLYERLGMIDEAIADYSKVIEIDPGHEKA 748

Query: 234 LVALAVMDLQANEAAGIRKGMEK-----MQRAFEIYPYCAMALNYLANHFFFTGQHFLVE 288
            +       + N  AG  KG+         R  EI P  A+A  +      +  +  L E
Sbjct: 749 YIN------RGNLLAG--KGLSSEAIADFSRVIEINPGNAVA--FYNRGIEYGERGMLDE 798

Query: 289 QLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGL 348
            + +   AV    P  + +YYN   +YH KG  E+A   Y  ++ E++  +E    Y   
Sbjct: 799 AIMDLGKAVMLR-PDLAEAYYNRGVAYHKKGMLEEAIADYNRAL-ELSPDNEKA--YNNR 854

Query: 349 GQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPR 408
           G     LG +  A+ +F + +EI PDN       G  Y + G IEKA E   +A  I P 
Sbjct: 855 GNAHAALGMYDEAIEDFSRAIEINPDNPTAYYNRGIEYGKKGLIEKAMEDFSRAIAIKPD 914

Query: 409 DAQAFIDLG 417
            A+A+ + G
Sbjct: 915 LAEAYYNRG 923



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 88/338 (26%), Positives = 145/338 (42%), Gaps = 23/338 (6%)

Query: 83   IAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKG 142
            ++IL A G+ Y  LG I+            A   Y+K   ID      ++ +G LL  KG
Sbjct: 712  VSILLARGLLYERLGMIDE-----------AIADYSKVIEIDPGHEKAYINRGNLLAGKG 760

Query: 143  EVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLG 202
               +A + F  V+E +  N  A   +      RG   +++    +A+ + P    A    
Sbjct: 761  LSSEAIADFSRVIEINPGNAVAFYNRGIEYGERGMLDEAIMDLGKAVMLRPDLAEAY-YN 819

Query: 203  IGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGI-RKGMEKMQRAF 261
             G+  +K G L +A   + RAL+L P+N +A          A+ A G+  + +E   RA 
Sbjct: 820  RGVAYHKKGMLEEAIADYNRALELSPDNEKAYNNRG----NAHAALGMYDEAIEDFSRAI 875

Query: 262  EIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDY 321
            EI P    A     N     G+  L+E+  E         P  + +YYN   +Y     Y
Sbjct: 876  EINPDNPTAY---YNRGIEYGKKGLIEKAMEDFSRAIAIKPDLAEAYYNRGVAYQRVERY 932

Query: 322  EKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKA 381
            E+A   Y  +++ I+  +E    Y   G     LG +  A+++F + +EI PDN      
Sbjct: 933  EEAIADYSRAIQ-ISPANEKA--YNNRGNAHAALGMYNEAVSDFSRAIEINPDNPTAYYN 989

Query: 382  LGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGEL 419
             G  Y + G  ++A     KA  + P  A+A+ ++G +
Sbjct: 990  RGIEYGKKGFFDEAIADFSKAVGLRPDLAEAYYNMGNI 1027



 Score = 53.9 bits (128), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 67/260 (25%), Positives = 107/260 (41%), Gaps = 12/260 (4%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
           A + Y+ A RI+ H    +  +G         E A S F   +  D D V A   +  +E
Sbjct: 56  AIEDYSAAIRINPHFSEAFYNRGVAYSLLNRPENAISDFTSAVNLDTDFVEAYYNRG-LE 114

Query: 173 FNR-GRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENV 231
           + R G Y  ++  + +A+ ++PS   A     G+   + G   KA + + RA +LDP   
Sbjct: 115 YARIGEYELAIADFSKAISLNPSYAAAYN-NRGVIHARRGMHEKAIEDYTRAFELDPSFS 173

Query: 232 EALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLT 291
           EAL    +   + +        +    RA EI P  A   + L N     G+    E   
Sbjct: 174 EALFNRGI---EFSRLGHFEDAVADYTRALEITPEKA---DILYNRGLAYGKLGQSEAAI 227

Query: 292 ETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQV 351
              L      P+ + ++ NL   Y   G  E A  +Y  ++ EIN    F+  Y   G +
Sbjct: 228 ADYLQCLEKNPSYAEAHNNLGVEYSHLGLLETALDHYAKAI-EINP--SFVEAYNNRGVL 284

Query: 352 QLKLGDFRSALTNFEKVLEI 371
             ++G F  A+  F + LEI
Sbjct: 285 FNRMGRFDEAIAEFSRALEI 304



 Score = 49.3 bits (116), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 82/358 (22%), Positives = 142/358 (39%), Gaps = 34/358 (9%)

Query: 80  YERIAILNALGVYYTYLGKIETK----------QREKEEHFILATQYYNKASRIDMHEPS 129
           Y+R+ +++     YT+  KI  K          + +K      A   + KA  I    P 
Sbjct: 416 YDRLGMVDEAIADYTHALKINPKFAEACFARGIEYQKANLSDRAISEFTKALEIRPAYPD 475

Query: 130 TWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRAL 189
               +G      G  + A   F   LE       AL+ +A     +G    + E    AL
Sbjct: 476 ALYQRGCEFAKIGLSDMAVRDFSRALEIRGQFFEALVARAEQYSRKGLSERATEDLTAAL 535

Query: 190 QVHPSCPGA-IRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAA 248
            + P+  G  +R GI   R   G++ +A   F +A+ ++P N +A    A++ LQ  +  
Sbjct: 536 ALEPTSAGLYVRRGIEQSR--SGKIEEALADFSKAIGMEPSNADAYFQRALI-LQ--KQG 590

Query: 249 GIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG------P 302
              +    + R  E+ P  A A       + F G+     +L  ++ A+ +        P
Sbjct: 591 RFEESASDISRVIELRPADAQA-------YLFRGRQ--NSELGNSSEAIADFSRALEIDP 641

Query: 303 TKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSAL 362
               +Y    +     G  EKA   Y  +++   +  E +           +LG +  A+
Sbjct: 642 RLFDAYIGRGQERSRCGQPEKAVEDYSNAIRLNGRSVEALT---ARATEYSRLGRYEDAV 698

Query: 363 TNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 420
            +  + LE  P +   L A G +Y +LG I++A     K  +IDP   +A+I+ G LL
Sbjct: 699 EDLSRALEQAPGDVSILLARGLLYERLGMIDEAIADYSKVIEIDPGHEKAYINRGNLL 756



 Score = 46.6 bits (109), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 75/317 (23%), Positives = 122/317 (38%), Gaps = 55/317 (17%)

Query: 197 GAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEK 256
           G I    G+  +K G   +A   + RA++++P++ EA     V     ++  G    +E 
Sbjct: 3   GEIYYNRGIAYHKKGLFDEAIADYTRAIEINPDDAEAYHNRGVAKAGKHDYPG---AIED 59

Query: 257 MQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALA----VTNHGPTKSHSYYNLA 312
              A  I P+ + A       F+  G  + +    E A++      N       +YYN  
Sbjct: 60  YSAAIRINPHFSEA-------FYNRGVAYSLLNRPENAISDFTSAVNLDTDFVEAYYNRG 112

Query: 313 RSYHSKGDYEKA----------------------------GLYYMASVKEINKPHE---- 340
             Y   G+YE A                            G++  A +++  +  E    
Sbjct: 113 LEYARIGEYELAIADFSKAISLNPSYAAAYNNRGVIHARRGMHEKA-IEDYTRAFELDPS 171

Query: 341 FIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLR 400
           F    +  G    +LG F  A+ ++ + LEI P+  + L   G  Y +LGQ E A     
Sbjct: 172 FSEALFNRGIEFSRLGHFEDAVADYTRALEITPEKADILYNRGLAYGKLGQSEAAIADYL 231

Query: 401 KAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIGVIH 458
           +  + +P  A+A  +LG         + L   +TA     KA E  P  +E  NN GV+ 
Sbjct: 232 QCLEKNPSYAEAHNNLGVEY------SHLGLLETALDHYAKAIEINPSFVEAYNNRGVLF 285

Query: 459 FEKGEFESAHQSFKDAL 475
              G F+ A   F  AL
Sbjct: 286 NRMGRFDEAIAEFSRAL 302



 Score = 41.2 bits (95), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 70/303 (23%), Positives = 118/303 (38%), Gaps = 32/303 (10%)

Query: 308 YYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEK 367
           YYN   +YH KG +++A   Y  ++ EIN P +    Y+  G  +    D+  A+ ++  
Sbjct: 6   YYNRGIAYHKKGLFDEAIADYTRAI-EIN-PDD-AEAYHNRGVAKAGKHDYPGAIEDYSA 62

Query: 368 VLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG-ELLISSDTG 426
            + I P   E     G  Y  L + E A      A  +D    +A+ + G E     +  
Sbjct: 63  AIRINPHFSEAFYNRGVAYSLLNRPENAISDFTSAVNLDTDFVEAYYNRGLEYARIGEYE 122

Query: 427 AALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDS 486
            A+  F  A +L             NN GVIH  +G  E A + +               
Sbjct: 123 LAIADFSKAISLNPSYA-----AAYNNRGVIHARRGMHEKAIEDY--------------- 162

Query: 487 KTKTYVIDASASMLQFKDMQLFHR---FEND----GNHVELPWNKVTVLFNLARLLEQIH 539
            T+ + +D S S   F     F R   FE+        +E+   K  +L+N      ++ 
Sbjct: 163 -TRAFELDPSFSEALFNRGIEFSRLGHFEDAVADYTRALEITPEKADILYNRGLAYGKLG 221

Query: 540 DTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSML 599
            + AA   Y   L K   Y +A+  L         L+ +++   +A+++N  +  A +  
Sbjct: 222 QSEAAIADYLQCLEKNPSYAEAHNNLGVEYSHLGLLETALDHYAKAIEINPSFVEAYNNR 281

Query: 600 GDL 602
           G L
Sbjct: 282 GVL 284


>gi|407849955|gb|EKG04518.1| hypothetical protein TCSYLVIO_004421 [Trypanosoma cruzi]
          Length = 912

 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 139/597 (23%), Positives = 247/597 (41%), Gaps = 62/597 (10%)

Query: 125 MHEPSTWVGKGQLLLAKG-EVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLE 183
           +H P     +G   +A G  ++ A   F+  + ADR  V A LG A V ++  RY     
Sbjct: 79  LHRPVLLYLEGLAAMASGTNLQTARVKFEEAIRADRYFVLARLGLAAVSYHMKRYKRCFS 138

Query: 184 FYKRALQVHPS-CPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDL 242
            Y+  L+   S CP  +R+G+GLC Y L  L  A++  +RAL+++ ++  AL+ L V+ L
Sbjct: 139 HYRVVLETLGSFCPPIVRVGMGLCAYHLNHLDYAQRCLERALEVNEDDELALLVLLVVFL 198

Query: 243 QANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGP 302
              +   I K +E  QR   I P  A  L  +A   +F               AVT    
Sbjct: 199 DRRQ---IPKVIEVAQRLRGILPENATVLLKVAELVYFR--------------AVTQ--- 238

Query: 303 TKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSAL 362
            +  +  N  R               +A V+ +    E     Y  G++ L LGD  +A 
Sbjct: 239 DRVKASANPIRR-------------LLAEVRRVATVEESAMADYQEGRLCLALGDLSNAR 285

Query: 363 TNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS 422
              E  +++ P+            +  G+  +A++LL +  K  P   +    L   + +
Sbjct: 286 LLLESAMQVLPNLLAARIHYARFLLLSGRETEAEQLLLRINKDHPNHKEVLQLLA--VYA 343

Query: 423 SDTGAALDAFKTARTLLKKAGEEVPIEVLN-NIG--VIHFEKGE---FESAHQSFKDALG 476
           S  G    A + +R L +      P ++ + +I       +KGE     S     +  +G
Sbjct: 344 SRHGLHEKALEYSRRLTEIVA---PGDIRSWSIASWCARLDKGETKKLMSHLARIRKEVG 400

Query: 477 DGIWLTLLDSKTKTYVIDASASMLQ-FKDMQLFHRFENDGNHVELPWNKVTVLFNLARLL 535
           + + + L+        +      LQ   D +L   F  + N   LP   V ++FNLA LL
Sbjct: 401 EPVSMKLM---ANIAALGGDTEALQGIIDCELGADFLGEPN---LPVVYVPLVFNLALLL 454

Query: 536 EQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNA 595
           E+  D   A  LY  ++ ++  +   Y+RL  +AK    L+ ++  +    +V  + P +
Sbjct: 455 EET-DRTRARQLYIFLVKQHGYFRPPYIRLHVLAKDDGFLKQAVAWLVLLQQVLPEDPTS 513

Query: 596 LSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEAT 655
           L+ +G++  +      A    R+A     G+     L+ G    + + ++ K   +    
Sbjct: 514 LASIGEIFFEKGRVGAAMTALRSAR----GRPLPVALAFGAAFLWCSQQHGKDNRRF--- 566

Query: 656 HLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQ 712
            L  AK+ +  V+ +   N+ AA+G    L  +  +D  + L  +V E      +V+
Sbjct: 567 -LASAKDRFAFVLRRDNGNVLAAHGLACCLGLEADYDRCQCLLDRVGEVRPNCSYVR 622


>gi|40063047|gb|AAR37903.1| TPR domain/sulfotransferase domain protein [uncultured marine
           bacterium 560]
          Length = 723

 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 91/342 (26%), Positives = 157/342 (45%), Gaps = 20/342 (5%)

Query: 138 LLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNR-GRYSDSLEFYKRALQVHPSCP 196
           L + G++ +A  A K VL  D  N P L   + V +   G+   +++ +++AL + P   
Sbjct: 21  LYSSGKINEAIDAIK-VLTKDFPNEPLLYNISGVCYKTIGQLDVAVKSFEKALAIKPDYT 79

Query: 197 GAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEK 256
             +   +GL   +LGQL  A + ++  L ++PE+ EA   L V      E   +   ++ 
Sbjct: 80  -EVNYNLGLTFQELGQLDAAVKCYEDVLAVNPEHAEAHNNLGVT---LKELEQLDAAVKS 135

Query: 257 MQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYH 316
            ++A  I P  A A N L N     GQ  +  +  E A+A+    P  + ++ NL  +  
Sbjct: 136 YEKAIAIKPDYAEAHNNLGNALKELGQLDVAVKSYEKAIAIK---PDFAETHNNLGNALQ 192

Query: 317 SKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNC 376
             G  ++A   Y  +   I    +F   YY LG V  +LG    A+ ++EK + I PD  
Sbjct: 193 GLGQLDEAVKSYEQA---IAIQSDFSNAYYNLGNVLRELGQLDDAVKSYEKAIAIKPDYD 249

Query: 377 ETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTAR 436
           E    LG+    LGQ+++A +   +A  I    + A+ +LG +L        L    TA 
Sbjct: 250 EAHNNLGNALQGLGQLDEAVKSYEQAIAIQSDFSNAYYNLGNVL------RELGQVDTAV 303

Query: 437 TLLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDALG 476
              KKA    P   +  NN+G+   + G+ ++A ++ + A+ 
Sbjct: 304 RSYKKAIVIKPDYAKAHNNLGIALQDLGQMDTAVKNLEKAIA 345



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 74/282 (26%), Positives = 123/282 (43%), Gaps = 17/282 (6%)

Query: 143 EVEQASSAFK-----IVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPG 197
           E+EQ  +A K     I ++ D       LG A  E   G+   +++ Y++A+ + P    
Sbjct: 125 ELEQLDAAVKSYEKAIAIKPDYAEAHNNLGNALKEL--GQLDVAVKSYEKAIAIKPDF-A 181

Query: 198 AIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKM 257
                +G     LGQL +A +++++A+ +  +   A   L  +     E   +   ++  
Sbjct: 182 ETHNNLGNALQGLGQLDEAVKSYEQAIAIQSDFSNAYYNLGNV---LRELGQLDDAVKSY 238

Query: 258 QRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHS 317
           ++A  I P    A N L N     GQ     +  E A+A+ +     S++YYNL      
Sbjct: 239 EKAIAIKPDYDEAHNNLGNALQGLGQLDEAVKSYEQAIAIQSDF---SNAYYNLGNVLRE 295

Query: 318 KGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCE 377
            G  + A   Y  ++  + KP ++   +  LG     LG   +A+ N EK + I PD  E
Sbjct: 296 LGQVDTAVRSYKKAI--VIKP-DYAKAHNNLGIALQDLGQMDTAVKNLEKAIAITPDFAE 352

Query: 378 TLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGEL 419
               LG     LGQI+ A +   KA  I P  A+A+ +L  L
Sbjct: 353 AHHNLGIALQDLGQIDAAVKGYEKAIAIKPDYAEAYHNLSYL 394



 Score = 40.0 bits (92), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 67/282 (23%), Positives = 111/282 (39%), Gaps = 48/282 (17%)

Query: 338 PHEFIFPYYGLGQVQLK-LGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQ 396
           P+E +   Y +  V  K +G    A+ +FEK L I PD  E    LG  + +LGQ++ A 
Sbjct: 42  PNEPLL--YNISGVCYKTIGQLDVAVKSFEKALAIKPDYTEVNYNLGLTFQELGQLDAAV 99

Query: 397 ELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNI 454
           +       ++P  A+A  +LG  L        L+    A    +KA    P   E  NN+
Sbjct: 100 KCYEDVLAVNPEHAEAHNNLGVTL------KELEQLDAAVKSYEKAIAIKPDYAEAHNNL 153

Query: 455 GVIHFEKGEFESAHQSFKDA-------------LGDGI-WLTLLDSKTKTYVIDASASML 500
           G    E G+ + A +S++ A             LG+ +  L  LD   K+Y     A  +
Sbjct: 154 GNALKELGQLDVAVKSYEKAIAIKPDFAETHNNLGNALQGLGQLDEAVKSY---EQAIAI 210

Query: 501 QFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVD 560
           Q         F N               +NL  +L ++     A   Y   +    DY +
Sbjct: 211 Q-------SDFSN-------------AYYNLGNVLRELGQLDDAVKSYEKAIAIKPDYDE 250

Query: 561 AYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDL 602
           A+  L    +    L  +++   +A+ +   + NA   LG++
Sbjct: 251 AHNNLGNALQGLGQLDEAVKSYEQAIAIQSDFSNAYYNLGNV 292


>gi|94969466|ref|YP_591514.1| hypothetical protein Acid345_2439 [Candidatus Koribacter versatilis
           Ellin345]
 gi|94551516|gb|ABF41440.1| Tetratricopeptide repeat protein [Candidatus Koribacter versatilis
           Ellin345]
          Length = 448

 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 81/309 (26%), Positives = 140/309 (45%), Gaps = 26/309 (8%)

Query: 173 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 232
           F+ G+Y DS   Y++A+++H     A   G+G    KLG+  +A  AFQ A   DP+NV+
Sbjct: 114 FHEGKYEDSAGSYRKAIEIHDDYAEAYN-GLGAALLKLGKTDEAIGAFQSAASKDPKNVD 172

Query: 233 ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTE 292
           AL       L A +A   +  +  +++A  + P     L   AN          ++QL  
Sbjct: 173 ALSNAGAALLHAQKA---QDALPYLEKAKALKPDAPDVLENYAN---------ALQQLGR 220

Query: 293 TALAVTNH------GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYY 346
           T  A+T +       P  + ++  L ++ ++   Y +A + +  S+       E +F   
Sbjct: 221 TNEAITEYEKALKGDPKSAVAWAQLGQTQYAAKQYPEAEVSFNKSLHLDAHQPEVLFL-- 278

Query: 347 GLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKID 406
            LG    + G  + A+ ++EK L + PDN + L  LGH Y    +  +A +  +KA    
Sbjct: 279 -LGAAYTEQGKSKEAMHSYEKGLALKPDNPDGLYNLGHAYETQKEYPRAIDSYQKALAAR 337

Query: 407 PRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFES 466
           P    A   LG   ++S+     DA  T R L+    ++  I    N     F KG F+ 
Sbjct: 338 PEFTHALAGLGACQLASNK--LDDAIATYRKLVPMQSDDPGIRF--NFATALFNKGNFKE 393

Query: 467 AHQSFKDAL 475
           A +++++A+
Sbjct: 394 AAENYREAV 402



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 79/334 (23%), Positives = 130/334 (38%), Gaps = 33/334 (9%)

Query: 117 YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 176
           Y KA  I       + G G  LL  G+ ++A  AF+     D  NV AL        +  
Sbjct: 126 YRKAIEIHDDYAEAYNGLGAALLKLGKTDEAIGAFQSAASKDPKNVDALSNAGAALLHAQ 185

Query: 177 RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVA 236
           +  D+L + ++A  + P  P  +         +LG+  +A   +++AL+ DP++  A   
Sbjct: 186 KAQDALPYLEKAKALKPDAPDVLE-NYANALQQLGRTNEAITEYEKALKGDPKSAVAWAQ 244

Query: 237 LAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALN---YLANH----FFFTGQHFLVEQ 289
           L                  + Q A + YP   ++ N   +L  H     F  G  +  + 
Sbjct: 245 LG-----------------QTQYAAKQYPEAEVSFNKSLHLDAHQPEVLFLLGAAYTEQG 287

Query: 290 LTETALAVTNHG----PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 345
            ++ A+     G    P      YNL  +Y ++ +Y +A   Y    K +    EF    
Sbjct: 288 KSKEAMHSYEKGLALKPDNPDGLYNLGHAYETQKEYPRAIDSYQ---KALAARPEFTHAL 344

Query: 346 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKI 405
            GLG  QL       A+  + K++ +  D+              G  ++A E  R+A K+
Sbjct: 345 AGLGACQLASNKLDDAIATYRKLVPMQSDDPGIRFNFATALFNKGNFKEAAENYREAVKL 404

Query: 406 DPRDAQAFIDLG-ELLISSDTGAALDAFKTARTL 438
            P  A A  +LG  LL  +D   A   F+ A  L
Sbjct: 405 KPDFAHAHYNLGMSLLRLNDAAGAKSEFEEAHRL 438



 Score = 43.5 bits (101), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 41/175 (23%), Positives = 70/175 (40%), Gaps = 12/175 (6%)

Query: 85  ILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEV 144
           +L  LG  YT  GK       KE     A   Y K   +    P      G     + E 
Sbjct: 275 VLFLLGAAYTEQGK------SKE-----AMHSYEKGLALKPDNPDGLYNLGHAYETQKEY 323

Query: 145 EQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIG 204
            +A  +++  L A  +   AL G    +    +  D++  Y++ + +    PG IR    
Sbjct: 324 PRAIDSYQKALAARPEFTHALAGLGACQLASNKLDDAIATYRKLVPMQSDDPG-IRFNFA 382

Query: 205 LCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQR 259
              +  G   +A + ++ A++L P+   A   L +  L+ N+AAG +   E+  R
Sbjct: 383 TALFNKGNFKEAAENYREAVKLKPDFAHAHYNLGMSLLRLNDAAGAKSEFEEAHR 437



 Score = 42.0 bits (97), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 71/312 (22%), Positives = 122/312 (39%), Gaps = 21/312 (6%)

Query: 348 LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 407
           LG+     G +  +  ++ K +EI+ D  E    LG   ++LG+ ++A    + AA  DP
Sbjct: 109 LGRTLFHEGKYEDSAGSYRKAIEIHDDYAEAYNGLGAALLKLGKTDEAIGAFQSAASKDP 168

Query: 408 RDAQAFIDLGELLISSDTGA-ALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFES 466
           ++  A  + G  L+ +     AL   + A+ L   A      +VL N      + G    
Sbjct: 169 KNVDALSNAGAALLHAQKAQDALPYLEKAKALKPDA-----PDVLENYANALQQLGRTNE 223

Query: 467 AHQSFKDAL-GDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKV 525
           A   ++ AL GD           K+ V  A     Q+   Q      +    + L  ++ 
Sbjct: 224 AITEYEKALKGD----------PKSAVAWAQLGQTQYAAKQYPEAEVSFNKSLHLDAHQP 273

Query: 526 TVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEA 585
            VLF L     +   +  A   Y   L    D  D    L    + +     +I+   +A
Sbjct: 274 EVLFLLGAAYTEQGKSKEAMHSYEKGLALKPDNPDGLYNLGHAYETQKEYPRAIDSYQKA 333

Query: 586 LKVNGKYPNALSMLGDLELKNDDWVKAKETFRA----ASDATDGKDSYATLSLGNWNYFA 641
           L    ++ +AL+ LG  +L ++    A  T+R      SD    + ++AT      N+  
Sbjct: 334 LAARPEFTHALAGLGACQLASNKLDDAIATYRKLVPMQSDDPGIRFNFATALFNKGNFKE 393

Query: 642 ALRNEKRAPKLE 653
           A  N + A KL+
Sbjct: 394 AAENYREAVKLK 405



 Score = 42.0 bits (97), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 83/395 (21%), Positives = 150/395 (37%), Gaps = 34/395 (8%)

Query: 349 GQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPR 408
           G+  L   D+R A+  F+K L +  D    ++ LG +   LG+  +++  L+KA ++ P 
Sbjct: 42  GEELLAKRDYRGAVKQFKKALTVQSDYEPAVRNLGTVMEVLGKDAESETDLQKAIRLAPE 101

Query: 409 DAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAH 468
           DA A   LG  L     G   D+  + R  ++   +    E  N +G    + G+ + A 
Sbjct: 102 DAVAHNSLGRTLFHE--GKYEDSAGSYRKAIEIHDDYA--EAYNGLGAALLKLGKTDEAI 157

Query: 469 QSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVL 528
            +F+ A          D K    + +A A++L  +  Q    +        L  +   VL
Sbjct: 158 GAFQSAASK-------DPKNVDALSNAGAALLHAQKAQDALPYLEKAK--ALKPDAPDVL 208

Query: 529 FNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKV 588
            N A  L+Q+  T  A   Y   L        A+ +L     A      +    N++L +
Sbjct: 209 ENYANALQQLGRTNEAITEYEKALKGDPKSAVAWAQLGQTQYAAKQYPEAEVSFNKSLHL 268

Query: 589 NGKYPNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYFAALRNEK 647
           +   P  L +LG    +     +A  ++ +  +   D  D       G +N   A   +K
Sbjct: 269 DAHQPEVLFLLGAAYTEQGKSKEAMHSYEKGLALKPDNPD-------GLYNLGHAYETQK 321

Query: 648 RAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASG 707
             P        +A + Y + +       +A  G G       + D +   + ++    S 
Sbjct: 322 EYP--------RAIDSYQKALAARPEFTHALAGLGACQLASNKLDDAIATYRKLVPMQSD 373

Query: 708 SVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLR 742
                 P +  N A   F +GNF  A + Y+  ++
Sbjct: 374 D-----PGIRFNFATALFNKGNFKEAAENYREAVK 403


>gi|218439885|ref|YP_002378214.1| hypothetical protein PCC7424_2942 [Cyanothece sp. PCC 7424]
 gi|218172613|gb|ACK71346.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7424]
          Length = 632

 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 90/338 (26%), Positives = 155/338 (45%), Gaps = 25/338 (7%)

Query: 93  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 152
           Y YLG I  + + K E  I A   YN A  I+ +    +   G  L  +G++E+A +A+ 
Sbjct: 63  YRYLG-IALRNQGKLEEAIAA---YNTAIEINPNYAEVYNNLGVALYYQGKLEEAIAAYN 118

Query: 153 IVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQ 212
             +E + +             N+G+  +++  Y +A++++P+   A  +G+G+  Y  G+
Sbjct: 119 TAIEINPNYAEVYSNLGFALSNQGKLEEAIAAYNKAIEINPNYAFA-YIGLGIALYNQGK 177

Query: 213 LGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALN 272
           L +A  A+ +A++++P   E    L        +   + + +     A EI P  A A N
Sbjct: 178 LEEAIAAYNKAIEINPNYAEVYSNLGFALYNQGK---LEEAIAAYNTAIEINPNDAFAYN 234

Query: 273 YLANHFFFTGQHFLVEQLT--ETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 330
            L      + Q  L E +    TA+ +    P  + +Y NL  + +++G  E+A   Y  
Sbjct: 235 NLG--IALSNQGKLEEAIAAYNTAIEIN---PNDAFAYNNLGVALYNQGKLEEAIAAYNT 289

Query: 331 SVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCE-----TL--KALG 383
           ++ EIN P++  F Y GLG      G    A+  + K L +     +     TL    LG
Sbjct: 290 AI-EIN-PND-AFAYIGLGIALHDQGKLEEAIAAYNKTLSLADKKADRASVHTLAHTTLG 346

Query: 384 HIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLI 421
           +   Q G++E+A     KA KIDP +  A  +L E LI
Sbjct: 347 YALQQQGKLEEAIAEYEKALKIDPNNTTAQNNLKEALI 384



 Score = 79.3 bits (194), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 82/346 (23%), Positives = 149/346 (43%), Gaps = 39/346 (11%)

Query: 52  KQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFI 111
            QGK+E+   I    ++ EI+  YA+V        N LGV   Y GK+E           
Sbjct: 72  NQGKLEE--AIAAYNTAIEINPNYAEV-------YNNLGVALYYQGKLEE---------- 112

Query: 112 LATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACV 171
            A   YN A  I+ +    +   G  L  +G++E+A +A+   +E + +   A +G    
Sbjct: 113 -AIAAYNTAIEINPNYAEVYSNLGFALSNQGKLEEAIAAYNKAIEINPNYAFAYIGLGIA 171

Query: 172 EFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENV 231
            +N+G+  +++  Y +A++++P+    +   +G   Y  G+L +A  A+  A++++P + 
Sbjct: 172 LYNQGKLEEAIAAYNKAIEINPNY-AEVYSNLGFALYNQGKLEEAIAAYNTAIEINPNDA 230

Query: 232 EALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLT 291
            A   L +     +    + + +     A EI P  A A N L    +  G+        
Sbjct: 231 FAYNNLGIA---LSNQGKLEEAIAAYNTAIEINPNDAFAYNNLGVALYNQGK-------L 280

Query: 292 ETALAVTNHG----PTKSHSYYNLARSYHSKGDYEKAGLYYMASV----KEINKPHEFIF 343
           E A+A  N      P  + +Y  L  + H +G  E+A   Y  ++    K+ ++      
Sbjct: 281 EEAIAAYNTAIEINPNDAFAYIGLGIALHDQGKLEEAIAAYNKTLSLADKKADRASVHTL 340

Query: 344 PYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQL 389
            +  LG    + G    A+  +EK L+I P+N      L    +QL
Sbjct: 341 AHTTLGYALQQQGKLEEAIAEYEKALKIDPNNTTAQNNLKEALIQL 386



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 89/400 (22%), Positives = 168/400 (42%), Gaps = 33/400 (8%)

Query: 134 KGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHP 193
           +G     +G   +A   F+ V++ + +N  A         N+G+  +++  Y  A++++P
Sbjct: 32  QGNAAQNEGNFTEAERIFRQVIKINPNNADAYRYLGIALRNQGKLEEAIAAYNTAIEINP 91

Query: 194 SCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKG 253
           +    +   +G+  Y  G+L +A  A+  A++++P   E    L       +    + + 
Sbjct: 92  NY-AEVYNNLGVALYYQGKLEEAIAAYNTAIEINPNYAEVYSNLG---FALSNQGKLEEA 147

Query: 254 MEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG----PTKSHSYY 309
           +    +A EI P  A A   L    +  G+        E A+A  N      P  +  Y 
Sbjct: 148 IAAYNKAIEINPNYAFAYIGLGIALYNQGK-------LEEAIAAYNKAIEINPNYAEVYS 200

Query: 310 NLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVL 369
           NL  + +++G  E+A   Y  ++ EIN P++  F Y  LG      G    A+  +   +
Sbjct: 201 NLGFALYNQGKLEEAIAAYNTAI-EIN-PND-AFAYNNLGIALSNQGKLEEAIAAYNTAI 257

Query: 370 EIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGA-- 427
           EI P++      LG      G++E+A      A +I+P DA A+I LG  L   D G   
Sbjct: 258 EINPNDAFAYNNLGVALYNQGKLEEAIAAYNTAIEINPNDAFAYIGLGIAL--HDQGKLE 315

Query: 428 -ALDAFKTARTLLKKAGEEVPIEVL--NNIGVIHFEKGEFESAHQSFKDALGDGIWLTLL 484
            A+ A+    +L  K  +   +  L    +G    ++G+ E A   ++ AL        +
Sbjct: 316 EAIAAYNKTLSLADKKADRASVHTLAHTTLGYALQQQGKLEEAIAEYEKALK-------I 368

Query: 485 DSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNK 524
           D    T   +   +++Q   ++L+           +PW++
Sbjct: 369 DPNNTTAQNNLKEALIQLT-IKLYPSLTVVDEQKHIPWDE 407



 Score = 42.7 bits (99), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 37/160 (23%), Positives = 73/160 (45%), Gaps = 17/160 (10%)

Query: 93  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 152
           Y  LG   + Q + EE    A   YN A  I+ ++   +   G  L  +G++E+A +A+ 
Sbjct: 233 YNNLGIALSNQGKLEE----AIAAYNTAIEINPNDAFAYNNLGVALYNQGKLEEAIAAYN 288

Query: 153 IVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQV------HPSCPGAIRLGIGLC 206
             +E + ++  A +G      ++G+  +++  Y + L +        S        +G  
Sbjct: 289 TAIEINPNDAFAYIGLGIALHDQGKLEEAIAAYNKTLSLADKKADRASVHTLAHTTLGYA 348

Query: 207 RYKLGQLGKARQAFQRALQLDPENV-------EALVALAV 239
             + G+L +A   +++AL++DP N        EAL+ L +
Sbjct: 349 LQQQGKLEEAIAEYEKALKIDPNNTTAQNNLKEALIQLTI 388



 Score = 42.0 bits (97), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 103/470 (21%), Positives = 178/470 (37%), Gaps = 84/470 (17%)

Query: 375 NCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFK 433
           N + L   G+     G   +A+ + R+  KI+P +A A+  LG  L +      A+ A+ 
Sbjct: 25  NIDQLFEQGNAAQNEGNFTEAERIFRQVIKINPNNADAYRYLGIALRNQGKLEEAIAAYN 84

Query: 434 TARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVI 493
           TA  +     E     V NN+GV  + +G+ E A  ++  A+                  
Sbjct: 85  TAIEINPNYAE-----VYNNLGVALYYQGKLEEAIAAYNTAI------------------ 121

Query: 494 DASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILF 553
                             E + N+ E+  N    L N  +L E I         Y   + 
Sbjct: 122 ------------------EINPNYAEVYSNLGFALSNQGKLEEAI-------AAYNKAIE 156

Query: 554 KYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAK 613
              +Y  AY+ L      +  L+ +I   N+A+++N  Y    S LG   L N    K +
Sbjct: 157 INPNYAFAYIGLGIALYNQGKLEEAIAAYNKAIEINPNYAEVYSNLG-FALYNQG--KLE 213

Query: 614 ETFRAASDA--TDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQH 671
           E   A + A   +  D++A  +LG      AL N+ +        LE+A   Y   I  +
Sbjct: 214 EAIAAYNTAIEINPNDAFAYNNLG-----IALSNQGK--------LEEAIAAYNTAIEIN 260

Query: 672 TSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFA 731
            ++ +A N  GV L  +G+ + +   +    E      F      +I L      QG   
Sbjct: 261 PNDAFAYNNLGVALYNQGKLEEAIAAYNTAIEINPNDAF-----AYIGLGIALHDQGKLE 315

Query: 732 LAMKMYQNCLRKFYYNTDAQILLYLARTH--YEAEQWQDCKKSLL---RAIHLAPSNYTL 786
            A+  Y   L       D   +  LA T   Y  +Q    ++++    +A+ + P+N T 
Sbjct: 316 EAIAAYNKTLSLADKKADRASVHTLAHTTLGYALQQQGKLEEAIAEYEKALKIDPNNTTA 375

Query: 787 RFDAGVAMQKFSASTLQKTRRTADEVR------STVAELENAVRVFSHLS 830
           + +   A+ + +   L  +    DE +        + EL   VR+ + +S
Sbjct: 376 QNNLKEALIQLTIK-LYPSLTVVDEQKHIPWDEPLIKELRATVRIIALVS 424


>gi|118366677|ref|XP_001016554.1| TPR Domain containing protein [Tetrahymena thermophila]
 gi|89298321|gb|EAR96309.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
          Length = 564

 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 76/312 (24%), Positives = 147/312 (47%), Gaps = 24/312 (7%)

Query: 113 ATQYYNKASRIDMHEPSTW-VGK-GQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQAC 170
           A  ++ KA  I +++  +W  GK G   L K   + A + F+   + D  +  A      
Sbjct: 94  AITFFQKA--IQLNDKDSWAFGKLGYSFLKKKMYDDAFTFFQKAAQLDPQDSSAFANLGY 151

Query: 171 VEFNRGRYSDSLEFYKRALQVHPSCPGAI-RLGIGLCRYKLGQLGKARQAFQRALQLDPE 229
           + + +  Y D++ F+++A+Q+ P C  A  R+G    + ++     A   FQ+++QLDP+
Sbjct: 152 LFYKKEMYDDAITFFQKAVQLDPKCSWAFGRMGYVFLKREMND--DAISFFQKSVQLDPK 209

Query: 230 NVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQ 289
           +  A   L  + L+          ++ +++A ++ P  + AL  L       G  FL +Q
Sbjct: 210 DSWAFGQLGYLFLKKEM---YDYAIKFLKKAVQLNPKDSQALGKL-------GYTFLKKQ 259

Query: 290 LTETALAVTNHG----PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 345
           + + A+          P  S +   L  S+  K  Y+ A  ++  S+ ++N    + F  
Sbjct: 260 MYDYAIKFLKKTVLLYPKDSWALGKLGYSFLKKEMYDDAITFFQKSI-QLNDKDSWAFG- 317

Query: 346 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKI 405
             LG   LK   +  A+T F+K +++   +      LG+ +++    + A   L+KAA++
Sbjct: 318 -KLGYSFLKKQMYDDAITFFQKAIQLNDKDSWAFGKLGYSFLKKEMYDDAITFLQKAAQL 376

Query: 406 DPRDAQAFIDLG 417
           DP+D+ AF +LG
Sbjct: 377 DPKDSLAFANLG 388



 Score = 56.6 bits (135), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 62/309 (20%), Positives = 140/309 (45%), Gaps = 20/309 (6%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
           A  ++ K+ ++D  +   +   G L L K   + A    K  ++ +  +  AL       
Sbjct: 196 AISFFQKSVQLDPKDSWAFGQLGYLFLKKEMYDYAIKFLKKAVQLNPKDSQALGKLGYTF 255

Query: 173 FNRGRYSDSLEFYKRALQVHPSCPGAI-RLGIGLCRYKLGQLGKARQAFQRALQLDPENV 231
             +  Y  +++F K+ + ++P    A+ +LG    + ++     A   FQ+++QL+ ++ 
Sbjct: 256 LKKQMYDYAIKFLKKTVLLYPKDSWALGKLGYSFLKKEM--YDDAITFFQKSIQLNDKDS 313

Query: 232 EALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLT 291
            A   L    L+          +   Q+A ++    + A   L       G  FL +++ 
Sbjct: 314 WAFGKLGYSFLKKQM---YDDAITFFQKAIQLNDKDSWAFGKL-------GYSFLKKEMY 363

Query: 292 ETALAVTNHG----PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYG 347
           + A+          P  S ++ NL  S+  K  Y+ A  ++  +V +++    + F   G
Sbjct: 364 DDAITFLQKAAQLDPKDSLAFANLGYSFMKKEMYDDAIKFFQKAV-QLDPKCSWAFGRMG 422

Query: 348 LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 407
              ++ ++ D  +A+T F+K +++ P +    + LG++++Q    + A + L+KA ++DP
Sbjct: 423 YVFLKKEMND--AAITFFQKTVQLDPKDSWAFEQLGYLFLQKEMYDYAIKFLKKAVQLDP 480

Query: 408 RDAQAFIDL 416
           + + A ++L
Sbjct: 481 KVSNAPLNL 489



 Score = 43.5 bits (101), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 52/253 (20%), Positives = 106/253 (41%), Gaps = 25/253 (9%)

Query: 221 QRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFF 280
           Q  +QLDP++ +A   L    L+          +   Q+A ++    + A   L      
Sbjct: 31  QETVQLDPKDSQAFRQLGYQFLKKQM---YDDAITLFQKAIQLDDKDSWAFGKL------ 81

Query: 281 TGQHFLVEQLTETALAVTNHG----PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEIN 336
            G  FL +++ + A+             S ++  L  S+  K  Y+ A  ++  +  +++
Sbjct: 82  -GYSFLKKKMYDDAITFFQKAIQLNDKDSWAFGKLGYSFLKKKMYDDAFTFFQKAA-QLD 139

Query: 337 KPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQ 396
                 F    LG +  K   +  A+T F+K +++ P        +G+++++    + A 
Sbjct: 140 PQDSSAFA--NLGYLFYKKEMYDDAITFFQKAVQLDPKCSWAFGRMGYVFLKREMNDDAI 197

Query: 397 ELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNI 454
              +K+ ++DP+D+ AF  LG L +  +       +  A   LKKA +  P   + L  +
Sbjct: 198 SFFQKSVQLDPKDSWAFGQLGYLFLKKEM------YDYAIKFLKKAVQLNPKDSQALGKL 251

Query: 455 GVIHFEKGEFESA 467
           G    +K  ++ A
Sbjct: 252 GYTFLKKQMYDYA 264


>gi|282901533|ref|ZP_06309455.1| TPR repeat protein [Cylindrospermopsis raciborskii CS-505]
 gi|281193576|gb|EFA68551.1| TPR repeat protein [Cylindrospermopsis raciborskii CS-505]
          Length = 1280

 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 111/506 (21%), Positives = 200/506 (39%), Gaps = 29/506 (5%)

Query: 117 YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 176
           Y +A  I+ +    + G+G      G+ + A   +   +  + +   A   +    FN  
Sbjct: 501 YTQAININPNYAQAYYGRGIARFNLGDKQGAIDDYTQAINTNPNYAQAYYNRGIARFNLE 560

Query: 177 RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVA 236
               S++ Y +A+ ++P+   A     G+ R +LG   +A   + +AL ++P++ E  VA
Sbjct: 561 DKQGSVDDYTQAININPNYAQAY-YAWGMLRSELGDKPEAVNNYTQALNINPDDTETYVA 619

Query: 237 --LAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETA 294
             L   +L  N+ A     ++   +A  + P  A   N   N           ++  +  
Sbjct: 620 RGLTRSELGDNQGA-----IDDYTQALNLNPDYACIYN---NRGIVRSDIADYQRAIDDY 671

Query: 295 LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLK 354
               N  P  + +YYN A  Y+  G+Y++A   Y  S++  +   +    Y G G    K
Sbjct: 672 TEAINISPDYADAYYNRAIVYYDLGNYQRAIDDYTQSLEIKSNCAD---AYIGRGTALYK 728

Query: 355 LGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFI 414
           LGD + A+ +F   L+I P   +     G +  +LG  + A      A  IDP  A A+ 
Sbjct: 729 LGDSQGAINDFHHALDIDPSYADAYNNRGIVRYELGDHQGAIGDFHHALDIDPSYADAYN 788

Query: 415 DLGELLIS-SDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKD 473
           + G +     D   A++ F  A  +     +       NN G++    GE + A + F  
Sbjct: 789 NRGIVRYELRDNRGAIEDFNHALNINSNYAQ-----AYNNRGIVRICLGERQLAIEDFTQ 843

Query: 474 ALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLAR 533
           A       T++ S      I+   +  +  + Q     E+    + +  N      N   
Sbjct: 844 A-------TIIASNYTESYINRGYARYELGNRQ--KAIEDFNQALNINPNYAQAYNNRGV 894

Query: 534 LLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYP 593
               + D+  A   +   L     Y +AY     +     + Q +IE  N+ALK+N  Y 
Sbjct: 895 AYTDLGDSEWAKDDFSQALQINPYYAEAYNNRGIVCYKLGDRQGAIEDFNQALKINSNYV 954

Query: 594 NALSMLGDLELKNDDWVKAKETFRAA 619
            A ++ G++  +  D   A E F  A
Sbjct: 955 EAYNIRGNIRYELGDRQGAIEDFNRA 980



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 142/678 (20%), Positives = 256/678 (37%), Gaps = 119/678 (17%)

Query: 52  KQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFI 111
           KQG ++ F Q++       I+ ++AD    R       G+ Y  LG  +           
Sbjct: 324 KQGAIDDFNQVIR------INSHFADGYAAR-------GLVYCDLGNHQE---------- 360

Query: 112 LATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACV 171
            A   +++A RI+ +    +  +G      G+ + A   +   L  +     A   +  +
Sbjct: 361 -AINDFSQAIRINPNYAQAYHNRGVARSQLGDKQGAIDDYTQSLNLNPKFASAYYNRGII 419

Query: 172 EFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENV 231
             + G    +++   +A++++P+   A     G  R  LG    A   + +AL++D   V
Sbjct: 420 RSDLGSNKAAMDDCTQAIRINPNYAEAYN-NRGAIRTYLGNYQGAIDDYIQALRVDSNYV 478

Query: 232 EALVALAV--MDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLAN---HFFFTGQHFL 286
           EA        ++L+ NE A     ++   +A  I P  A A  Y       F    +   
Sbjct: 479 EAYYNWGTTRINLEDNEGA-----IDDYTQAININPNYAQA--YYGRGIARFNLGDKQGA 531

Query: 287 VEQLTETALAVTNHGPTKSHSYYN-------LARSYHSKGDYEKAGLYYMASVKEINKPH 339
           ++  T+      N  P  + +YYN       L     S  DY +A          IN   
Sbjct: 532 IDDYTQ----AINTNPNYAQAYYNRGIARFNLEDKQGSVDDYTQA----------ININP 577

Query: 340 EFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELL 399
            +   YY  G ++ +LGD   A+ N+ + L I PD+ ET  A G    +LG  + A +  
Sbjct: 578 NYAQAYYAWGMLRSELGDKPEAVNNYTQALNINPDDTETYVARGLTRSELGDNQGAIDDY 637

Query: 400 RKAAKIDPRDAQAFIDLGELLISSDTGA---ALDAFKTARTLLKKAGEEVPIEVLNNIGV 456
            +A  ++P  A  + + G  ++ SD      A+D +  A  +          +   N  +
Sbjct: 638 TQALNLNPDYACIYNNRG--IVRSDIADYQRAIDDYTEAINISPDYA-----DAYYNRAI 690

Query: 457 IHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQ-----LFHRF 511
           ++++ G ++ A   +  +L        + S      I    ++ +  D Q       H  
Sbjct: 691 VYYDLGNYQRAIDDYTQSL-------EIKSNCADAYIGRGTALYKLGDSQGAINDFHHAL 743

Query: 512 ENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKA 571
           + D ++ +   N+  V + L      I D       +   L     Y DAY     +   
Sbjct: 744 DIDPSYADAYNNRGIVRYELGDHQGAIGD-------FHHALDIDPSYADAYNNRGIVRYE 796

Query: 572 RNNLQLSIELVNEALKVNGKYPNALS-------MLGDLELKNDDWVKAKETFRAASDATD 624
             + + +IE  N AL +N  Y  A +        LG+ +L  +D+ +A      AS+ T+
Sbjct: 797 LRDNRGAIEDFNHALNINSNYAQAYNNRGIVRICLGERQLAIEDFTQATII---ASNYTE 853

Query: 625 G--KDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAG 682
                 YA   LGN                     +KA E + + +  + +   A N  G
Sbjct: 854 SYINRGYARYELGN--------------------RQKAIEDFNQALNINPNYAQAYNNRG 893

Query: 683 VVLAEKGQFDVSKDLFTQ 700
           V   + G  + +KD F+Q
Sbjct: 894 VAYTDLGDSEWAKDDFSQ 911



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 102/460 (22%), Positives = 177/460 (38%), Gaps = 85/460 (18%)

Query: 60   RQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNK 119
            R I +   +  I   YAD  Y R  +   LG Y          QR  ++        Y +
Sbjct: 666  RAIDDYTEAINISPDYADAYYNRAIVYYDLGNY----------QRAIDD--------YTQ 707

Query: 120  ASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYS 179
            +  I  +    ++G+G  L   G+ + A + F   L+ D     A   +  V +  G + 
Sbjct: 708  SLEIKSNCADAYIGRGTALYKLGDSQGAINDFHHALDIDPSYADAYNNRGIVRYELGDHQ 767

Query: 180  DSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAV 239
             ++  +  AL + PS   A     G+ RY+L     A + F  AL ++    +A      
Sbjct: 768  GAIGDFHHALDIDPSYADAYN-NRGIVRYELRDNRGAIEDFNHALNINSNYAQAY----- 821

Query: 240  MDLQANEAAGIRKGMEKMQRAFEIYPYCAM-ALNYLANHFFFTGQHFLVEQLTETALAVT 298
                 N    +R  + + Q A E +    + A NY  +   +  + +   +L     A+ 
Sbjct: 822  -----NNRGIVRICLGERQLAIEDFTQATIIASNYTES---YINRGYARYELGNRQKAIE 873

Query: 299  ------NHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYG----- 347
                  N  P  + +Y N   +Y   GD E A   +  +++        I PYY      
Sbjct: 874  DFNQALNINPNYAQAYNNRGVAYTDLGDSEWAKDDFSQALQ--------INPYYAEAYNN 925

Query: 348  LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 407
             G V  KLGD + A+ +F + L+I  +  E     G+I  +LG  + A E   +A  +  
Sbjct: 926  RGIVCYKLGDRQGAIEDFNQALKINSNYVEAYNIRGNIRYELGDRQGAIEDFNRALSL-- 983

Query: 408  RDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLN--NIGVIHFE----- 460
                  +DL E L                   +K G  + I++ N  N+ ++ FE     
Sbjct: 984  ----GSLDLTENL----------------KFWEKGGLTLTIKLRNYLNLKILSFEVVSKK 1023

Query: 461  -KGEF---ESAHQSFKDALGDGIWLTLLDSKTKTYVIDAS 496
              GE    +++   F + LGD I L +++    T+ I+ +
Sbjct: 1024 NSGEIIKRDASAIYFVEDLGDDITLEMVEIPGGTFTINPA 1063



 Score = 43.1 bits (100), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 86/413 (20%), Positives = 152/413 (36%), Gaps = 56/413 (13%)

Query: 341 FIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLR 400
           F   Y   G V   LG+ + A+ +F + + I P+  +     G    QLG  + A +   
Sbjct: 341 FADGYAARGLVYCDLGNHQEAINDFSQAIRINPNYAQAYHNRGVARSQLGDKQGAIDDYT 400

Query: 401 KAAKIDPRDAQAFIDLGELLISSDTG---AALDAFKTARTLLKKAGEEVPIEVLNNIGVI 457
           ++  ++P+ A A+ + G  +I SD G   AA+D    A  +     E       NN G I
Sbjct: 401 QSLNLNPKFASAYYNRG--IIRSDLGSNKAAMDDCTQAIRINPNYAE-----AYNNRGAI 453

Query: 458 HFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQ-----LFHRFE 512
               G ++ A   +  AL        +DS       +   + +  +D +           
Sbjct: 454 RTYLGNYQGAIDDYIQAL-------RVDSNYVEAYYNWGTTRINLEDNEGAIDDYTQAIN 506

Query: 513 NDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKAR 572
            + N+ +  + +    FNL      I D       Y   +    +Y  AY        AR
Sbjct: 507 INPNYAQAYYGRGIARFNLGDKQGAIDD-------YTQAINTNPNYAQAYYNRGI---AR 556

Query: 573 NNL---QLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDAT-DGKDS 628
            NL   Q S++   +A+ +N  Y  A    G L  +  D  +A   +  A +   D  ++
Sbjct: 557 FNLEDKQGSVDDYTQAININPNYAQAYYAWGMLRSELGDKPEAVNNYTQALNINPDDTET 616

Query: 629 YATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEK 688
           Y    L                + E    + A + YT+ +  +       N  G+V ++ 
Sbjct: 617 YVARGL---------------TRSELGDNQGAIDDYTQALNLNPDYACIYNNRGIVRSDI 661

Query: 689 GQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCL 741
             +  + D +T+       ++     D + N A VY+  GN+  A+  Y   L
Sbjct: 662 ADYQRAIDDYTEAI-----NISPDYADAYYNRAIVYYDLGNYQRAIDDYTQSL 709


>gi|427739371|ref|YP_007058915.1| hypothetical protein Riv7116_6007 [Rivularia sp. PCC 7116]
 gi|427374412|gb|AFY58368.1| tetratricopeptide repeat protein [Rivularia sp. PCC 7116]
          Length = 471

 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 84/323 (26%), Positives = 129/323 (39%), Gaps = 56/323 (17%)

Query: 108 EHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLG 167
           E+F  A   + +A     H    W  +G  L   G++++A S+  I +E   D + ALL 
Sbjct: 55  ENFEEALIDFERAITNSSHSHYIWYERGVSLFRLGKLQEALSSLDIAIEIQPDYLKALLL 114

Query: 168 QACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLD 227
           Q  V   + +   +L  +++ + + P+ P A     GL  Y+LGQL  A   F +A+Q  
Sbjct: 115 QGIVMLEQKKLEPALISFEKIILIKPNYPKA-WYEKGLTLYELGQLEDALMCFDKAIQYK 173

Query: 228 PENVEALV--ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 285
           P+   A     + + DL+  E+A I       ++A EI P                    
Sbjct: 174 PKFDLAWYRKGITLFDLEQLESALI-----CFEKAIEIEP-------------------- 208

Query: 286 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG----DYEKAGLYYMASVKEINKPHEF 341
                                   N A +++ KG      EK         K I   H+ 
Sbjct: 209 ------------------------NDANTWYEKGCTLWKMEKLEYAIFCFDKAIEYNHDL 244

Query: 342 IFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRK 401
              +Y  G     LG+F SALT FEK ++I PD  E L     I   LGQ+E   +   +
Sbjct: 245 NLAWYHKGIALFDLGNFESALTCFEKAIQIQPDFSEALCRKAEILYSLGQLEDTIDTFNQ 304

Query: 402 AAKIDPRDAQAFIDLGELLISSD 424
             K+DP++ Q    LG  L  S+
Sbjct: 305 VLKLDPQNCQVRNRLGTALGKSE 327



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 70/298 (23%), Positives = 119/298 (39%), Gaps = 54/298 (18%)

Query: 117 YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 176
           + KA  I+ ++ +TW  KG  L    ++E A   F   +E + D   A   +    F+ G
Sbjct: 200 FEKAIEIEPNDANTWYEKGCTLWKMEKLEYAIFCFDKAIEYNHDLNLAWYHKGIALFDLG 259

Query: 177 RYSDSLEFYKRALQVHPSCPGAIRLGIGLCR-----YKLGQLGKARQAFQRALQLDPENV 231
            +  +L  +++A+Q+ P    A      LCR     Y LGQL      F + L+LDP+N 
Sbjct: 260 NFESALTCFEKAIQIQPDFSEA------LCRKAEILYSLGQLEDTIDTFNQVLKLDPQNC 313

Query: 232 EALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLT 291
           +    L        ++      +    +  EI  +     NY A+ F             
Sbjct: 314 QVRNRLGTA---LGKSERYEDAILAFDKVIEIDSH-----NYAAHCF------------- 352

Query: 292 ETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQV 351
                       + ++ + L R+  +     KA         EIN  ++  +  YG   V
Sbjct: 353 ------------RGYTLHKLRRNEDAIAALNKA--------IEINPNYDLAWKIYG--SV 390

Query: 352 QLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRD 409
             KL     A+  F+K L++ PD    L      YV L +I+ A + L++A  I+P++
Sbjct: 391 LHKLKRNEEAILFFDKALDLSPDQPNILYDKACCYVALNKIDLAIQNLQQAININPKE 448


>gi|118350024|ref|XP_001008293.1| TPR Domain containing protein [Tetrahymena thermophila]
 gi|89290060|gb|EAR88048.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
          Length = 373

 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 81/340 (23%), Positives = 148/340 (43%), Gaps = 26/340 (7%)

Query: 142 GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 201
           G++ +A    + +      +  A    A V FN     +S     +AL+++P    A   
Sbjct: 9   GQINEAKYCLESIQRLSNQDFEAYYRIAAVYFNMNMIEESKSCLLKALEINPQFENA-HT 67

Query: 202 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAV----MDLQANEAAGIRKGMEKM 257
            +G    K+G+  KA++   +AL+++P++V +L+ L      M++Q  +     K ++  
Sbjct: 68  SLGYLYKKIGKPQKAKECILKALEINPKSVFSLLELGYLYEDMNMQDEQKQTYMKILQIE 127

Query: 258 QRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHS 317
            + FE      + L Y   +     +H+         L V    P      YNL      
Sbjct: 128 PKNFE--AQYGLGLYYFKQNMLQEARHWF--------LQVLEINPNFKSVVYNLGIISEK 177

Query: 318 KGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCE 377
            G+YE A  +Y  ++ ++N P +    Y+ LG    K+ +   A   + KV ++ P +  
Sbjct: 178 LGEYENAKQFYQKAI-QLN-PQD-ANTYFNLGVTYEKMKNVEEARKCYLKVQQLEPKSIY 234

Query: 378 TLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTART 437
            L  LG IY  LGQ ++AQ+      KIDP++  A+ +L  + I           + +  
Sbjct: 235 ALNNLGAIYFDLGQFQEAQKCFEDIIKIDPQNFGAYYNLSAIYIKKGN------IEESIQ 288

Query: 438 LLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDAL 475
            L+K  +  P  I     +G I + KG+F+ A Q ++ A+
Sbjct: 289 CLQKTIQINPEYINAHKQLGQIFYTKGQFDEAIQCYQQAI 328



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 63/264 (23%), Positives = 124/264 (46%), Gaps = 11/264 (4%)

Query: 145 EQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIG 204
           EQ  +  KI L+ +  N  A  G     F +    ++  ++ + L+++P+    +   +G
Sbjct: 115 EQKQTYMKI-LQIEPKNFEAQYGLGLYYFKQNMLQEARHWFLQVLEINPNFKSVV-YNLG 172

Query: 205 LCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIY 264
           +   KLG+   A+Q +Q+A+QL+P++      L V   +       RK   K+Q+   + 
Sbjct: 173 IISEKLGEYENAKQFYQKAIQLNPQDANTYFNLGVTYEKMKNVEEARKCYLKVQQ---LE 229

Query: 265 PYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 324
           P    ALN L   +F  GQ    ++  E  + +    P    +YYNL+  Y  KG+ E++
Sbjct: 230 PKSIYALNNLGAIYFDLGQFQEAQKCFEDIIKID---PQNFGAYYNLSAIYIKKGNIEES 286

Query: 325 GLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGH 384
            +  +    +IN   E+I  +  LGQ+    G F  A+  +++ ++I   + ++   + +
Sbjct: 287 -IQCLQKTIQINP--EYINAHKQLGQIFYTKGQFDEAIQCYQQAIKINSQDSDSYFMIAN 343

Query: 385 IYVQLGQIEKAQELLRKAAKIDPR 408
            Y  +G  ++A+    K  +I+P 
Sbjct: 344 TYNLMGNQKEAKFYQEKGEQINPE 367



 Score = 45.4 bits (106), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 45/208 (21%), Positives = 91/208 (43%), Gaps = 29/208 (13%)

Query: 30  LDILKAEQAPLDLWLIIAREYFKQGKVEQ----FRQILEEGSSPEIDEYYADVRYERIAI 85
           + IL+ E    +    +   YFKQ  +++    F Q+LE      I+  +  V Y     
Sbjct: 121 MKILQIEPKNFEAQYGLGLYYFKQNMLQEARHWFLQVLE------INPNFKSVVYN---- 170

Query: 86  LNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVE 145
              LG+    LG+ E            A Q+Y KA +++  + +T+   G        VE
Sbjct: 171 ---LGIISEKLGEYEN-----------AKQFYQKAIQLNPQDANTYFNLGVTYEKMKNVE 216

Query: 146 QASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGL 205
           +A   +  V + +  ++ AL     + F+ G++ ++ + ++  +++ P   GA    +  
Sbjct: 217 EARKCYLKVQQLEPKSIYALNNLGAIYFDLGQFQEAQKCFEDIIKIDPQNFGA-YYNLSA 275

Query: 206 CRYKLGQLGKARQAFQRALQLDPENVEA 233
              K G + ++ Q  Q+ +Q++PE + A
Sbjct: 276 IYIKKGNIEESIQCLQKTIQINPEYINA 303



 Score = 40.8 bits (94), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 59/243 (24%), Positives = 102/243 (41%), Gaps = 29/243 (11%)

Query: 556 QDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKET 615
           QD+ +AY R+AA+    N ++ S   + +AL++N ++ NA + LG L  K     KAKE 
Sbjct: 27  QDF-EAYYRIAAVYFNMNMIEESKSCLLKALEINPQFENAHTSLGYLYKKIGKPQKAKEC 85

Query: 616 FRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNL 675
              A +  + K  ++ L LG       +++E+             K+ Y +++     N 
Sbjct: 86  ILKALE-INPKSVFSLLELGYLYEDMNMQDEQ-------------KQTYMKILQIEPKNF 131

Query: 676 YAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMK 735
            A  G G+   ++     ++  F QV E     +      V  NL  +    G +  A +
Sbjct: 132 EAQYGLGLYYFKQNMLQEARHWFLQVLE-----INPNFKSVVYNLGIISEKLGEYENAKQ 186

Query: 736 MYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAP-SNYTLR------F 788
            YQ  ++      DA     L  T+ + +  ++ +K  L+   L P S Y L       F
Sbjct: 187 FYQKAIQ--LNPQDANTYFNLGVTYEKMKNVEEARKCYLKVQQLEPKSIYALNNLGAIYF 244

Query: 789 DAG 791
           D G
Sbjct: 245 DLG 247


>gi|257059198|ref|YP_003137086.1| peptidase S1 and S6 chymotrypsin/Hap [Cyanothece sp. PCC 8802]
 gi|256589364|gb|ACV00251.1| peptidase S1 and S6 chymotrypsin/Hap [Cyanothece sp. PCC 8802]
          Length = 810

 Score = 83.2 bits (204), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 106/438 (24%), Positives = 198/438 (45%), Gaps = 52/438 (11%)

Query: 47  AREYFKQGKVEQ----FRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETK 102
            R   K GK  +    FR+++E      +D   AD         N LG    Y GK++  
Sbjct: 36  GRTAGKMGKYTEAEAIFRRVIE------LDPNLADA-------YNNLGNALYYQGKLDE- 81

Query: 103 QREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNV 162
                     A   Y KA +++ ++   +   G  L  +G++E+A +A++  ++ + +  
Sbjct: 82  ----------AIAAYQKAIQLNPNDADAYNNLGNALYYQGKLEEAIAAYQKAIQLNPNFA 131

Query: 163 PAL--LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAI-RLGIGLCRYKLGQLGKARQA 219
            A   LG A  +  +G+  +++  Y++A+Q++P+   A   LGI L     G+L +A  A
Sbjct: 132 QAYNNLGNALSD--QGKLEEAIAAYQKAIQLNPNFTQAYYNLGIALS--DQGKLEEAIAA 187

Query: 220 FQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFF 279
           +Q+A+QL+P   +A   L V      +   + + +   Q+A ++ P  A A N L    +
Sbjct: 188 YQKAIQLNPNYADAYYNLGVALF---DQGKLDEAIAAYQKAIQLDPNDANAYNNLGAALY 244

Query: 280 FTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPH 339
             G+   +E+            P  + +Y NL  +   +G  ++A   Y  ++ ++N   
Sbjct: 245 KQGK---LEEAIAAYQKAIQLNPNLAEAYNNLGVALSDQGKRDEAIAAYQKAI-QLNP-- 298

Query: 340 EFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELL 399
            F   Y GLG      G    A+  ++K +++ P+       LG+     G+ ++A    
Sbjct: 299 NFALAYNGLGNALSDQGKRDEAIAAYQKAIQLNPNFALAYNGLGNALSDQGKRDEAIAAY 358

Query: 400 RKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVL--NNIGVI 457
           +KA ++DP DA A+ +LG  L   + G   +A     T  +KA +  P   L  NN+G  
Sbjct: 359 QKAIQLDPNDANAYNNLG--LALRNQGKRDEAI----TAYQKAIQLNPNFALAYNNLGNA 412

Query: 458 HFEKGEFESAHQSFKDAL 475
            + +G+ E A  +++ A+
Sbjct: 413 LYSQGKREEAIAAYQKAI 430



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 100/417 (23%), Positives = 184/417 (44%), Gaps = 52/417 (12%)

Query: 93  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 152
           Y  LG   + Q + EE    A   Y KA +++ +    +   G  L  +G++E+A +A++
Sbjct: 134 YNNLGNALSDQGKLEE----AIAAYQKAIQLNPNFTQAYYNLGIALSDQGKLEEAIAAYQ 189

Query: 153 IVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQ 212
             ++ + +   A        F++G+  +++  Y++A+Q+ P+   A    +G   YK G+
Sbjct: 190 KAIQLNPNYADAYYNLGVALFDQGKLDEAIAAYQKAIQLDPNDANAYN-NLGAALYKQGK 248

Query: 213 LGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIR-KGMEKMQRAFEIYPYCAMAL 271
           L +A  A+Q+A+QL+P   EA   L V    A    G R + +   Q+A ++ P  A+A 
Sbjct: 249 LEEAIAAYQKAIQLNPNLAEAYNNLGV----ALSDQGKRDEAIAAYQKAIQLNPNFALAY 304

Query: 272 NYLANHFFFTGQ--------HFLVEQLTETALAVTNHG---------------------- 301
           N L N     G+           ++     ALA    G                      
Sbjct: 305 NGLGNALSDQGKRDEAIAAYQKAIQLNPNFALAYNGLGNALSDQGKRDEAIAAYQKAIQL 364

Query: 302 -PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRS 360
            P  +++Y NL  +  ++G  ++A   Y  ++ ++N    F   Y  LG      G    
Sbjct: 365 DPNDANAYNNLGLALRNQGKRDEAITAYQKAI-QLNP--NFALAYNNLGNALYSQGKREE 421

Query: 361 ALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 420
           A+  ++K +++ P+       LG+     G+ ++A    +KA +++P  A A+ +LG  L
Sbjct: 422 AIAAYQKAIQLNPNFALAYNNLGNALSDQGKRDEAIAAYQKAIQLNPNFALAYNNLGNAL 481

Query: 421 ISSDTGAALDAFKTARTLLKKAGEEVPIEVL--NNIGVIHFEKGEFESAHQSFKDAL 475
             SD G   +A  T     +KA +  P   L  NN+G    ++G+   A  +++ AL
Sbjct: 482 --SDQGKLNEAIAT----YQKAIQLNPNFALAYNNLGNALKDQGKLNEAIAAYQKAL 532


>gi|224534365|ref|ZP_03674943.1| TPR domain protein [Borrelia spielmanii A14S]
 gi|224514467|gb|EEF84783.1| TPR domain protein [Borrelia spielmanii A14S]
          Length = 379

 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 77/318 (24%), Positives = 135/318 (42%), Gaps = 14/318 (4%)

Query: 123 IDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSL 182
           +D+ E S    +G  L+ +  + +A S F  +LE D +N  AL+G   +E  +  Y  ++
Sbjct: 22  LDVTEKSK---RGYQLIKEERLSEAESLFSDILEKDNENNYALVGLGDIERKKNNYDKAI 78

Query: 183 EFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDL 242
            +Y+R L  HP+   A+  G+G C   L    KA   ++  L+ DPEN+  L  +A    
Sbjct: 79  VYYQRCLVKHPNNNYAL-FGLGDCYRSLDDYKKATDIWEEYLKFDPENITVLTRVAS--- 134

Query: 243 QANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGP 302
              +    +K  +   +  E+ P    AL  +  H ++  + +         +   N   
Sbjct: 135 SYRKLKNFQKSKQTYLKVMELMPENDYALVGIG-HLYYDFKEYKEALKYWLKMYELNQSK 193

Query: 303 TKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSAL 362
                  ++   Y    ++ + G+Y+     EI+ P  F +  +GL        D++ AL
Sbjct: 194 VDVRVLTSIGNCYRKLREFTR-GIYFFKKALEIS-PSNF-YAVFGLADCYRGNKDYKEAL 250

Query: 363 TNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS 422
             +  ++E  P N   L  +G  Y  L   E AQ   +KA  +   D   F  LG  LI 
Sbjct: 251 KYWLDIIEKDPKNNLVLTRVGDAYRYLNDYENAQIYYKKALDV---DFDMFAILGLALIQ 307

Query: 423 SDTGAALDAFKTARTLLK 440
            + G   +A    ++L+K
Sbjct: 308 KEQGKYEEALIAIKSLIK 325


>gi|146184699|ref|XP_001029949.2| SLEI family protein [Tetrahymena thermophila]
 gi|146143045|gb|EAR82286.2| SLEI family protein [Tetrahymena thermophila SB210]
          Length = 2342

 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 160/705 (22%), Positives = 291/705 (41%), Gaps = 110/705 (15%)

Query: 124 DMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLE 183
           ++++  T   +G     K  +++A   F  V+E D +N  A     C    +    DSLE
Sbjct: 5   NINDIETLYKQGLEFEGKKMIDEAIECFNKVIEIDSNNAEAYYSLGCCFELKNLVDDSLE 64

Query: 184 FYKRALQVHPSCPGAI--RLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMD 241
            + + L ++P+   A   +  I L   K   + +A  + ++A+++DP  V+A   LA   
Sbjct: 65  SFNKVLSINPNYLKAYASKADIHL---KKSNIDEAIISLKQAIEIDPNFVQAYQKLAQAY 121

Query: 242 LQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG 301
            + N+   I +  +K+    EI P    A + LA  +   GQ   +++       +    
Sbjct: 122 KKQNKLDQITECYKKI---IEIEPKNMEAFHELALTYEIKGQ---IDEAYAWYKKILTID 175

Query: 302 PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEIN----KPHEFIFPYYGLGQVQLKLGD 357
           P    +Y +LAR+Y      E+A +  + +  EI+    + HE       LG +  K   
Sbjct: 176 PQFIKAYISLARNYFCDSMTEEA-IRMLKTALEIDPNSAEAHE------RLGFIYEKQSM 228

Query: 358 FRSALTNFEKVLEIYPDNCETLKALGHIYV--QLGQIEKAQELLRKAAKIDPRDAQAFID 415
           F SAL +++  LE  P+      +L +IY   QL Q  +A + LRKA +IDP   QA+  
Sbjct: 229 FDSALISYKIALEKNPNFLSVYISLAYIYFLKQLDQ--EAIKQLRKAIEIDPNFVQAYER 286

Query: 416 LGELLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKD 473
           LG   +  +     +A K      KKA E  P       N+G++++ +G++  +   +K 
Sbjct: 287 LG--FVFQNRKKYEEAIKN----YKKAIELDPKYFNAQYNLGLLYYYQGKYNDSLLCYKK 340

Query: 474 ALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLAR 533
           A+        LD K     +DA      + ++ L + F  D N+  + + +  +  N   
Sbjct: 341 AIE-------LDPK----YVDA------YNNLGLVY-FGLDMNNEAIQYYQKALELN--- 379

Query: 534 LLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYP 593
                                  DY  A+       +  N ++ +IE   +A+K+N K+ 
Sbjct: 380 ----------------------PDYYKAHYNSGLAYEKDNLIEEAIESYKKAIKINPKFL 417

Query: 594 NALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLG------------------ 635
            AL  LGD+ ++ +   +  E F+     +   + Y   SLG                  
Sbjct: 418 KALIRLGDICVEREMIDEGIECFKKIVQLSPNSE-YDFFSLGELYLTKKIYEEAIKCYKK 476

Query: 636 ----NWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQF 691
               N  Y  AL N   A + +    ++A E Y + I    +   A    G+  A K   
Sbjct: 477 TLEINPQYIKALNNLGLAYEYQQM-FDQAIECYKKAIEIDPNYHLAYYNCGISYASKKMV 535

Query: 692 DVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDA- 750
           D + + + +V E     +  Q  +   N+ ++Y  Q  +  A++ YQ+ L+    N ++ 
Sbjct: 536 DEAIECYKKVLE-----INPQYLNASTNMGYLYSQQKMYDKAIECYQSALQ---VNENSL 587

Query: 751 QILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQ 795
           +IL  L   +Y++       +   R I + P ++   ++ GVA Q
Sbjct: 588 KILNNLGYAYYKSNMHDQAIEIYKRVIQIDPKSFLANYNIGVAYQ 632



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 99/409 (24%), Positives = 175/409 (42%), Gaps = 63/409 (15%)

Query: 110  FILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPAL--LG 167
            F L+ + Y KA  ++           ++ L +  V +A      +LE + +N      LG
Sbjct: 942  FDLSIENYQKAFELNPKFTDAIKKIMRIYLDRKMVSEAKEFHNKMLEENPNNAEIFYQLG 1001

Query: 168  QACVEFNRGRYSDSLEFYKRALQVHPS-CPGAIRLGIGLCRY-KLGQLGKARQAFQRALQ 225
            +A  E +  +Y D++  YK+ +Q+ P      I LG   C Y    +  +A + F + ++
Sbjct: 1002 EAYQE-DSSKYEDAIACYKKVIQIDPKHIDSHIELG---CIYLDKKEYQQAIEYFNKVIE 1057

Query: 226  LDPENVEAL--VALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQ 283
            LDP+ V AL  + LA  D + NE     K +E   +A EI P    ++       + TG 
Sbjct: 1058 LDPKEVVALNNIGLAYYDQKMNE-----KALEYYNKALEINPTFQQSI-------YNTGL 1105

Query: 284  HFLVEQLTETALAVTNH----GPTKSHSYYNL---------------------------- 311
             + ++   E AL   N      PT+  S   +                            
Sbjct: 1106 VYEIQNQYEKALEYYNKVLKINPTEKKSLLRVEKINEKIGNINSEKPEETSKKEVQNTLS 1165

Query: 312  -ARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYY----GLGQVQLKLGDFRSALTNFE 366
             A+ Y+SKG    A +    S++ + K  E    YY     LG +  + G F  A+ N+ 
Sbjct: 1166 SAKEYYSKGYDFYAQMEDEKSIQCLQKAIEIDPNYYEAYDKLGLIYGEKGMFDEAIQNYL 1225

Query: 367  KVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTG 426
            K LEI P   + + ++ +IY    +IE+A+E  +K   ++P   +   +LGE  +  D  
Sbjct: 1226 KALEINPKFFDIIPSIMNIYFDQNRIEEAKEFHQKIVDLNPNCTETLYELGE--VYQDQN 1283

Query: 427  AALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
               +AF+  + +LK   + +   +   +G I+ +K + + A + +K AL
Sbjct: 1284 MIDEAFECYQKILKIDPQYIDAHI--ELGNIYLDKHDNDQALECYKRAL 1330



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 143/630 (22%), Positives = 253/630 (40%), Gaps = 88/630 (13%)

Query: 114 TQYYNKASRIDMHEPSTWVGKGQLLLA---KGEVEQASSAFKIVLEADRDNVPALLGQAC 170
           T+ Y K   I   EP       +L L    KG++++A + +K +L  D   + A +  A 
Sbjct: 131 TECYKKIIEI---EPKNMEAFHELALTYEIKGQIDEAYAWYKKILTIDPQFIKAYISLAR 187

Query: 171 VEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPEN 230
             F      +++   K AL++ P+   A    +G    K      A  +++ AL+ +P  
Sbjct: 188 NYFCDSMTEEAIRMLKTALEIDPNSAEA-HERLGFIYEKQSMFDSALISYKIALEKNPNF 246

Query: 231 VEALVALAVMDL--QANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVE 288
           +   ++LA +    Q ++ A     ++++++A EI P    A   L   F F  +    E
Sbjct: 247 LSVYISLAYIYFLKQLDQEA-----IKQLRKAIEIDPNFVQAYERLG--FVFQNRKKYEE 299

Query: 289 QLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGL 348
            +     A+    P   ++ YNL   Y+ +G Y  + L Y    K I    +++  Y  L
Sbjct: 300 AIKNYKKAIE-LDPKYFNAQYNLGLLYYYQGKYNDSLLCYK---KAIELDPKYVDAYNNL 355

Query: 349 GQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPR 408
           G V   L     A+  ++K LE+ PD  +     G  Y +   IE+A E  +KA KI+P+
Sbjct: 356 GLVYFGLDMNNEAIQYYQKALELNPDYYKAHYNSGLAYEKDNLIEEAIESYKKAIKINPK 415

Query: 409 DAQAFIDLGELLISSD-TGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESA 467
             +A I LG++ +  +     ++ FK    L   +  +       ++G ++  K  +E A
Sbjct: 416 FLKALIRLGDICVEREMIDEGIECFKKIVQLSPNSEYD-----FFSLGELYLTKKIYEEA 470

Query: 468 HQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTV 527
            + +K                KT  I+           Q      N G            
Sbjct: 471 IKCYK----------------KTLEINP----------QYIKALNNLG------------ 492

Query: 528 LFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALK 587
              LA   +Q+ D   A   Y+  +    +Y  AY        ++  +  +IE   + L+
Sbjct: 493 ---LAYEYQQMFDQ--AIECYKKAIEIDPNYHLAYYNCGISYASKKMVDEAIECYKKVLE 547

Query: 588 VNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRNEK 647
           +N +Y NA + +G L  +   + KA E +++A                N N    L N  
Sbjct: 548 INPQYLNASTNMGYLYSQQKMYDKAIECYQSALQV-------------NENSLKILNNLG 594

Query: 648 RAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASG 707
            A      H ++A E+Y RVI     +  A    GV    K  FD + + + +V+E    
Sbjct: 595 YAYYKSNMH-DQAIEIYKRVIQIDPKSFLANYNIGVAYQMKNMFDEAIEFYKKVEE---- 649

Query: 708 SVFVQMPDVWINLAHVYFAQGNFALAMKMY 737
            +F +   V+I L +VY  +  +  A++ Y
Sbjct: 650 -IFPKYFTVFIRLGNVYGEKKMYEEALENY 678



 Score = 72.8 bits (177), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 96/384 (25%), Positives = 163/384 (42%), Gaps = 26/384 (6%)

Query: 96   LGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVL 155
            LG +   Q+  +E    A   Y KA  ++    S ++  G   L K   ++A   +K VL
Sbjct: 1544 LGTVYQDQKMVDE----AIACYQKAIELNPQSTSAYIELGNSYLGKVMYDKALECYKKVL 1599

Query: 156  EADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGK 215
            E D     A      V +N+     +LE+Y +AL+V+P    +I    GL   +  Q  K
Sbjct: 1600 EIDPKKAVAYNNIGLVHYNQNMDDLALEYYNKALEVNPKYELSI-YNSGLIYEQKNQNDK 1658

Query: 216  ARQAFQRALQLDPENVEALVAL-AVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYL 274
            A + +++ L ++P + + L  +  + +   N     +   EK+Q+     P    A ++L
Sbjct: 1659 ALECYKKVLAINPTDKKTLTRIEKINEKNVNLKLSEKDLEEKLQKV----P--VTAKDHL 1712

Query: 275  ANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKE 334
               F +      VEQ  E         P    +Y  L   Y  K  +E A   Y  +++ 
Sbjct: 1713 EQAFLYLTIK-KVEQSIELLKKAIEIDPNYYDAYDKLGLIYKQKEMFEDAIQNYEKAIEI 1771

Query: 335  INKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK 394
             +K  E I   Y L  + L L     A    +K+LE   D  ET   LG  Y     + +
Sbjct: 1772 NSKGFESI---YNLMVIYLDLIKINEAAQFHQKILEKNKDCSETNYRLGLAYQDKNMLNE 1828

Query: 395  AQELLRKAAKIDPRDAQAFIDLGEL---LISSDTGAALDAFKTARTLLKKAGEEVPIEVL 451
            A  L  KA ++D +   A++ LG +   LI  D   AL+ F+    +  K      +   
Sbjct: 1829 AIVLFSKAIELDSKHVNAYVKLGNVYLKLIMYDK--ALEVFQKILEIDTKQ-----VVAY 1881

Query: 452  NNIGVIHFEKGEFESAHQSFKDAL 475
            NNIG++++ + + + A + ++ AL
Sbjct: 1882 NNIGLVYYNQKKDDLALEYYQKAL 1905



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 162/759 (21%), Positives = 303/759 (39%), Gaps = 94/759 (12%)

Query: 40   LDLWLIIAREYFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTY-LGK 98
             D+   I   YF Q ++E+ ++                  +++I  LN       Y LG+
Sbjct: 1235 FDIIPSIMNIYFDQNRIEEAKEF-----------------HQKIVDLNPNCTETLYELGE 1277

Query: 99   IETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEAD 158
            +   Q   +E F    + Y K  +ID       +  G + L K + +QA   +K  LE +
Sbjct: 1278 VYQDQNMIDEAF----ECYQKILKIDPQYIDAHIELGNIYLDKHDNDQALECYKRALEIN 1333

Query: 159  RDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQ 218
               + A      V +N      +LE+YK+AL++ P+   +I    GL   +  Q  +A +
Sbjct: 1334 PKEIVAYNNIGLVYYNLKNSDQALEYYKKALEIDPNYELSI-YNSGLAYEQKNQNEEALK 1392

Query: 219  AFQRALQLDPENVEALVAL-AVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANH 277
             + +  Q++P   ++L+ +  +  L  N  + I++ +E   +          A +Y    
Sbjct: 1393 YYNKVQQINPNEKKSLLRIQKINSLNENFDSKIQQSIENNPQT---------AKDYYKQG 1443

Query: 278  FFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINK 337
            F +  Q    ++  E         P    +Y  L   Y  K  YE+A  Y+  ++K IN 
Sbjct: 1444 FLYYVQ-MQDDKSIECLKKSVELDPLYFEAYDKLGFVYQQKKMYEEALEYFKEAIK-IN- 1500

Query: 338  PHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQE 397
            P  F      + ++ L+      A    + + E+ PD  +T + LG +Y     +++A  
Sbjct: 1501 PKCF-NSISSIMRIYLEQKKIDEAKEYHKMINEMNPDCAQTQQELGTVYQDQKMVDEAIA 1559

Query: 398  LLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVL--NNIG 455
              +KA +++P+   A+I+LG    +S  G  +  +  A    KK  E  P + +  NNIG
Sbjct: 1560 CYQKAIELNPQSTSAYIELG----NSYLGKVM--YDKALECYKKVLEIDPKKAVAYNNIG 1613

Query: 456  VIHFEKGEFESAHQSFKDAL-----------GDGIWLTLLDSKTKTYVIDASASMLQFKD 504
            ++H+ +   + A + +  AL             G+     +   K          +   D
Sbjct: 1614 LVHYNQNMDDLALEYYNKALEVNPKYELSIYNSGLIYEQKNQNDKALECYKKVLAINPTD 1673

Query: 505  MQLFHRFEN-DGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLI--------LFKY 555
             +   R E  +  +V L  ++  +   L ++     D +  + LY  I        L K 
Sbjct: 1674 KKTLTRIEKINEKNVNLKLSEKDLEEKLQKVPVTAKDHLEQAFLYLTIKKVEQSIELLKK 1733

Query: 556  -----QDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWV 610
                  +Y DAY +L  I K +   + +I+   +A+++N K   ++  L  + L   D +
Sbjct: 1734 AIEIDPNYYDAYDKLGLIYKQKEMFEDAIQNYEKAIEINSKGFESIYNLMVIYL---DLI 1790

Query: 611  KAKETFRAASDATD-GKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIV 669
            K  E  +      +  KD   T      NY   L  + +        L +A  L+++ I 
Sbjct: 1791 KINEAAQFHQKILEKNKDCSET------NYRLGLAYQDK------NMLNEAIVLFSKAIE 1838

Query: 670  QHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGN 729
              + ++ A    G V  +   +D + ++F ++ E  +  V       + N+  VY+ Q  
Sbjct: 1839 LDSKHVNAYVKLGNVYLKLIMYDKALEVFQKILEIDTKQVV-----AYNNIGLVYYNQKK 1893

Query: 730  FALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQD 768
              LA++ YQ  L     N    + LY +   YE +   D
Sbjct: 1894 DDLALEYYQKALE---INPKYLLSLYNSGLVYETKNQND 1929



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 80/328 (24%), Positives = 142/328 (43%), Gaps = 59/328 (17%)

Query: 117  YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 176
            ++KA  +D    + +V  G + L     ++A   F+ +LE D   V A      V +N+ 
Sbjct: 1833 FSKAIELDSKHVNAYVKLGNVYLKLIMYDKALEVFQKILEIDTKQVVAYNNIGLVYYNQK 1892

Query: 177  RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVA 236
            +   +LE+Y++AL+++P    ++    GL      Q  KA + +Q+AL ++P + + L  
Sbjct: 1893 KDDLALEYYQKALEINPKYLLSL-YNSGLVYETKNQNDKALECYQKALDINPNDKQTLDR 1951

Query: 237  LAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFL--VEQLTETA 294
            +  + L+     GI K                           F   +FL  +E+ T++A
Sbjct: 1952 MMKLFLKT----GIIKDE-------------------------FDVDNFLQKMEKNTQSA 1982

Query: 295  LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHE----FIFPYYGLGQ 350
                       + +Y    +++SK   ++       S+K +NK  E    F   Y  LG 
Sbjct: 1983 -----------YDFYKQGYTFYSKKMKDQ-------SIKCLNKAIEIDPNFFEAYDKLGL 2024

Query: 351  VQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDA 410
            +  + G    A+ N++KV+EI P        LG+IY+   Q+ ++    +K  +IDP   
Sbjct: 2025 IYEEKGMLDQAIENYKKVIEINPKFINAYNKLGNIYLDKKQLNESISYYQKCTEIDPNYL 2084

Query: 411  QAFIDLGELLISSDTG---AALDAFKTA 435
              F +LG  L   D G    AL ++K A
Sbjct: 2085 YGFYNLG--LAYEDKGFDRKALLSYKKA 2110



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 96/434 (22%), Positives = 168/434 (38%), Gaps = 84/434 (19%)

Query: 112  LATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVL---------------- 155
            LA +YYNKA  ++     +    G +   K + ++A   +K VL                
Sbjct: 1624 LALEYYNKALEVNPKYELSIYNSGLIYEQKNQNDKALECYKKVLAINPTDKKTLTRIEKI 1683

Query: 156  --------------EADRDNVPAL----LGQACVEFNRGRYSDSLEFYKRALQVHPSCPG 197
                          E     VP      L QA +     +   S+E  K+A+++ P+   
Sbjct: 1684 NEKNVNLKLSEKDLEEKLQKVPVTAKDHLEQAFLYLTIKKVEQSIELLKKAIEIDPNYYD 1743

Query: 198  AIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDL---QANEAAGI-RKG 253
            A    +GL   +      A Q +++A++++ +  E++  L V+ L   + NEAA   +K 
Sbjct: 1744 AYD-KLGLIYKQKEMFEDAIQNYEKAIEINSKGFESIYNLMVIYLDLIKINEAAQFHQKI 1802

Query: 254  MEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLAR 313
            +EK +   E      +A         +  ++ L E +   + A+        ++Y  L  
Sbjct: 1803 LEKNKDCSETNYRLGLA---------YQDKNMLNEAIVLFSKAIE-LDSKHVNAYVKLGN 1852

Query: 314  SYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYP 373
             Y     Y+KA L     + EI+      +   GL     K  D   AL  ++K LEI P
Sbjct: 1853 VYLKLIMYDKA-LEVFQKILEIDTKQVVAYNNIGLVYYNQKKDDL--ALEYYQKALEINP 1909

Query: 374  DNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISS---------- 423
                +L   G +Y    Q +KA E  +KA  I+P D Q    + +L + +          
Sbjct: 1910 KYLLSLYNSGLVYETKNQNDKALECYQKALDINPNDKQTLDRMMKLFLKTGIIKDEFDVD 1969

Query: 424  --------DTGAALDAFKTARTLLKKAGEEVPIEVLN--------------NIGVIHFEK 461
                    +T +A D +K   T   K  ++  I+ LN               +G+I+ EK
Sbjct: 1970 NFLQKMEKNTQSAYDFYKQGYTFYSKKMKDQSIKCLNKAIEIDPNFFEAYDKLGLIYEEK 2029

Query: 462  GEFESAHQSFKDAL 475
            G  + A +++K  +
Sbjct: 2030 GMLDQAIENYKKVI 2043



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 72/329 (21%), Positives = 131/329 (39%), Gaps = 21/329 (6%)

Query: 81   ERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLA 140
            + +  LN +G+ Y      + K  EK      A +YYNKA  I+     +    G +   
Sbjct: 1061 KEVVALNNIGLAYY-----DQKMNEK------ALEYYNKALEINPTFQQSIYNTGLVYEI 1109

Query: 141  KGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIR 200
            + + E+A   +  VL+ +     +LL    +    G  +          +V  +   A  
Sbjct: 1110 QNQYEKALEYYNKVLKINPTEKKSLLRVEKINEKIGNINSEKPEETSKKEVQNTLSSAKE 1169

Query: 201  -LGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQR 259
                G   Y   +  K+ Q  Q+A+++DP   EA   L ++     E     + ++   +
Sbjct: 1170 YYSKGYDFYAQMEDEKSIQCLQKAIEIDPNYYEAYDKLGLI---YGEKGMFDEAIQNYLK 1226

Query: 260  AFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 319
            A EI P     +  + N +F   +   +E+  E    + +  P  + + Y L   Y  + 
Sbjct: 1227 ALEINPKFFDIIPSIMNIYFDQNR---IEEAKEFHQKIVDLNPNCTETLYELGEVYQDQN 1283

Query: 320  DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 379
              ++A   Y   +K      ++I  +  LG + L   D   AL  +++ LEI P      
Sbjct: 1284 MIDEAFECYQKILK---IDPQYIDAHIELGNIYLDKHDNDQALECYKRALEINPKEIVAY 1340

Query: 380  KALGHIYVQLGQIEKAQELLRKAAKIDPR 408
              +G +Y  L   ++A E  +KA +IDP 
Sbjct: 1341 NNIGLVYYNLKNSDQALEYYKKALEIDPN 1369



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 65/270 (24%), Positives = 116/270 (42%), Gaps = 13/270 (4%)

Query: 145 EQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGA-IRLGI 203
           +QA   +K V++ D  +  A          +  + +++EFYK+  ++ P      IRLG 
Sbjct: 604 DQAIEIYKRVIQIDPKSFLANYNIGVAYQMKNMFDEAIEFYKKVEEIFPKYFTVFIRLGN 663

Query: 204 GLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEI 263
                K+ +  +A + + +      E +E +  L  +D    +   I + +    +A E+
Sbjct: 664 VYGEKKMYE--EALENYNKVKDFSMEKLEEISNLENVD----KMNLIEEVIGCYIKAIEL 717

Query: 264 YPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEK 323
            P    A  YLA  +  T +   V++  +    V    P  + +Y  L   Y  K   +K
Sbjct: 718 NPEYVQAYYYLAIIYQNTNR---VDEAIDYYQKVIQLDPQHADAYLELGNKYLHKNLTDK 774

Query: 324 AGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALG 383
           A   +  +++   K ++    Y G+G +         AL  F+K LEI P+   ++   G
Sbjct: 775 ALECFYKTIEIEPKKYD---AYNGVGAIFYAQKKDDQALEYFKKALEINPNYILSIYNSG 831

Query: 384 HIYVQLGQIEKAQELLRKAAKIDPRDAQAF 413
            IY Q GQ EKA E  +K   I+P D ++ 
Sbjct: 832 LIYEQKGQSEKALECYKKVISINPADKKSL 861


>gi|206890955|ref|YP_002249256.1| TPR domain protein, [Thermodesulfovibrio yellowstonii DSM 11347]
 gi|206742893|gb|ACI21950.1| TPR domain protein, putative [Thermodesulfovibrio yellowstonii DSM
           11347]
          Length = 542

 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 109/477 (22%), Positives = 205/477 (42%), Gaps = 71/477 (14%)

Query: 44  LIIAREYFKQGKVEQFRQILEEGSSPEIDE------YYADVRYERIAILNALGVYYTYLG 97
           ++  +E  K+    +F +I+   +  +IDE      Y  DV  E    ++AL V    L 
Sbjct: 32  IVFYKEALKENPQSKFLKIILADTYLKIDELETAKNYITDVLKEDTENIDALQV----LA 87

Query: 98  KIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEA 157
            +  K+++ +E    A + Y K  +   ++       G L L  G  ++A   FK +L+ 
Sbjct: 88  SVYVKEKKVKE----AIEVYEKILQQSPNKIEMLSKIGNLYLISGMYDKAIETFKKILKE 143

Query: 158 DRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKAR 217
           D +N+ AL     +   +  +  + E +K  L+++P    A    +G      G L  A 
Sbjct: 144 DSENIMALHFLGIIYIEKKDFKSARESFKTILKLNPDYEPAYT-NLGAVEELAGNLKDAE 202

Query: 218 QAFQRALQLDPENV-----------------EALVALAVMDLQANEAAGIR--------- 251
             F++AL+L+PEN+                 EA+  L  +  Q +E+  I          
Sbjct: 203 LYFKKALELNPENLFARERLINLYLSQKSYKEAIKELETLKEQKSESEQIHEKLALLYLQ 262

Query: 252 -----KGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSH 306
                K  E+++     +P     + YL+  +  TG+    E L +  +++    P + +
Sbjct: 263 IKQYDKATEELEYLLSKHPKDLNLMYYLSLIYIETGKLSEAEHLLKQIISI---NPKQVN 319

Query: 307 SYYNLARSY-HSKGDYEKAGLY-----YMASVKEINKPHEFIFPYYGLGQVQLKLGDFRS 360
           ++ NLA  Y   K   E   +Y     +   V EI         Y    +  + L D++ 
Sbjct: 320 AFLNLATVYLKQKKLIEALNIYDEILQFAGDVPEI---------YIYATETAMDLKDYQR 370

Query: 361 ALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 420
           A    E  L  +P+N +     G ++ +LG+ E+ ++L++K   + P  A+A   LG   
Sbjct: 371 ARQYIENALSRFPENPDVNFIAGVVFDKLGKFEETEKLMKKTLSLKPDHAEALNYLG--Y 428

Query: 421 ISSDTGAALDAFKTARTLLKKAGEEVPIE--VLNNIGVIHFEKGEFESAHQSFKDAL 475
             +D G  L   K A +L++KA +  P     L+++G ++F+ G+ ++A Q   +A+
Sbjct: 429 SYADRGINL---KEALSLIQKAVQLKPNNGYYLDSLGWVYFKLGDKKNALQYLLEAI 482



 Score = 47.0 bits (110), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 97/493 (19%), Positives = 184/493 (37%), Gaps = 109/493 (22%)

Query: 308 YYNLARSYHS--KGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNF 365
           Y+N    Y++   GD  KA ++Y  ++KE N   +F+     L    LK+ +  +A    
Sbjct: 13  YFNFMAGYYASINGDLNKAIVFYKEALKE-NPQSKFL--KIILADTYLKIDELETAKNYI 69

Query: 366 EKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDT 425
             VL+   +N + L+ L  +YV+  ++++A E+  K  +  P                  
Sbjct: 70  TDVLKEDTENIDALQVLASVYVKEKKVKEAIEVYEKILQQSPNK---------------- 113

Query: 426 GAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLD 485
                                 IE+L+ IG ++   G ++ A ++FK  L +       D
Sbjct: 114 ----------------------IEMLSKIGNLYLISGMYDKAIETFKKILKE-------D 144

Query: 486 SKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAAS 545
           S+                                     +  L  L  +  +  D  +A 
Sbjct: 145 SEN------------------------------------IMALHFLGIIYIEKKDFKSAR 168

Query: 546 VLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELK 605
             ++ IL    DY  AY  L A+ +   NL+ +     +AL++N +   A   L +L L 
Sbjct: 169 ESFKTILKLNPDYEPAYTNLGAVEELAGNLKDAELYFKKALELNPENLFARERLINLYLS 228

Query: 606 NDDWVKA-KETFRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELY 664
              + +A KE        ++ +  +  L+L                 L+    +KA E  
Sbjct: 229 QKSYKEAIKELETLKEQKSESEQIHEKLAL---------------LYLQIKQYDKATEEL 273

Query: 665 TRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVY 724
             ++ +H  +L       ++  E G+   ++ L  Q+      S+  +  + ++NLA VY
Sbjct: 274 EYLLSKHPKDLNLMYYLSLIYIETGKLSEAEHLLKQI-----ISINPKQVNAFLNLATVY 328

Query: 725 FAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNY 784
             Q     A+ +Y   L+  +     +I +Y   T  + + +Q  ++ +  A+   P N 
Sbjct: 329 LKQKKLIEALNIYDEILQ--FAGDVPEIYIYATETAMDLKDYQRARQYIENALSRFPENP 386

Query: 785 TLRFDAGVAMQKF 797
            + F AGV   K 
Sbjct: 387 DVNFIAGVVFDKL 399



 Score = 46.6 bits (109), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 69/272 (25%), Positives = 107/272 (39%), Gaps = 61/272 (22%)

Query: 142 GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPG---- 197
           G++ +A    K ++  +   V A L  A V   + +  ++L  Y   LQ     P     
Sbjct: 298 GKLSEAEHLLKQIISINPKQVNAFLNLATVYLKQKKLIEALNIYDEILQFAGDVPEIYIY 357

Query: 198 AIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEA-LVALAVMDLQANEAAGIRKGMEK 256
           A    + L  Y+     +ARQ  + AL   PEN +   +A  V D       G  +  EK
Sbjct: 358 ATETAMDLKDYQ-----RARQYIENALSRFPENPDVNFIAGVVFD-----KLGKFEETEK 407

Query: 257 -MQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAV---TNHGPTKSHSYYNLA 312
            M++   + P  A ALNYL   +   G + L E L+    AV    N+G           
Sbjct: 408 LMKKTLSLKPDHAEALNYLGYSYADRGIN-LKEALSLIQKAVQLKPNNG----------- 455

Query: 313 RSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIY 372
                         YY+ S                LG V  KLGD ++AL    + ++  
Sbjct: 456 --------------YYLDS----------------LGWVYFKLGDKKNALQYLLEAIKYV 485

Query: 373 PDNCETLKALGHIYVQLGQIEKAQELLRKAAK 404
            D+   L+ LG IY +LG  ++A +  ++A K
Sbjct: 486 KDDPVILEHLGDIYKELGNYKEALQTWQEAMK 517


>gi|434388288|ref|YP_007098899.1| tetratricopeptide repeat protein [Chamaesiphon minutus PCC 6605]
 gi|428019278|gb|AFY95372.1| tetratricopeptide repeat protein [Chamaesiphon minutus PCC 6605]
          Length = 1675

 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 84/359 (23%), Positives = 150/359 (41%), Gaps = 16/359 (4%)

Query: 117 YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 176
           YNK   +  H+   W   G +L+  G  E+A +++   LE   ++  A   +  V F  G
Sbjct: 113 YNKTIELQPHKQEAWANLGWVLVGLGRWEEALASYDRALELRPEDGEAWANRGWVLFQLG 172

Query: 177 RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVA 236
            Y  ++E  + +++++P    A     G   ++LG   +A  A+ RAL++ P++   L  
Sbjct: 173 YYQQAIENCECSIELNPEDRFAW-YQKGRALFELGSYDRALAAYDRALEISPDDSLTLSN 231

Query: 237 LAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALA 296
              +     +   ++      +++  I P    A N      F  GQ        + AL 
Sbjct: 232 KGWLLFHIGQ---VQAACGCYEQSLHIDPSDRFAWNNHGQVLFQLGQIRAAIDAYQKALE 288

Query: 297 VTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLG 356
           + +       ++ NL  ++  +  ++ A   Y A+   I    EF   +   G+V   LG
Sbjct: 289 LDSQ---FYQAWNNLGVAHFEQKSFQDALRCYRAA---IELAPEFQAAWCNQGKVLFFLG 342

Query: 357 DFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDL 416
           DF +AL  + KV ++ PD        G+I   LG++E A        K+ P+ A+ + + 
Sbjct: 343 DFEAALAAYTKVTQLQPDFDRAWNYCGNILFHLGELEPALRRYEMVTKLQPQLAEGWSNR 402

Query: 417 GELLISSD-TGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDA 474
           G +L+  D    AL  +  A TL  K          N+ G   F  G +E A   ++ A
Sbjct: 403 GNVLLLLDRPQEALTCYTQATTLAPKDA-----SAWNDRGKAMFHLGRYEHALDCYRKA 456



 Score = 73.6 bits (179), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 86/365 (23%), Positives = 143/365 (39%), Gaps = 26/365 (7%)

Query: 117 YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 176
           Y ++  ID  +   W   GQ+L   G++  A  A++  LE D     A        F + 
Sbjct: 249 YEQSLHIDPSDRFAWNNHGQVLFQLGQIRAAIDAYQKALELDSQFYQAWNNLGVAHFEQK 308

Query: 177 RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVA 236
            + D+L  Y+ A+++ P    A     G   + LG    A  A+ +  QL P+       
Sbjct: 309 SFQDALRCYRAAIELAPEFQAAW-CNQGKVLFFLGDFEAALAAYTKVTQLQPD------- 360

Query: 237 LAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALA 296
               D   N    I   + +++ A   Y         LA  +   G   L+    + AL 
Sbjct: 361 ---FDRAWNYCGNILFHLGELEPALRRYEMVTKLQPQLAEGWSNRGNVLLLLDRPQEALT 417

Query: 297 V----TNHGPTKSHSYYNLARSYHSKGDYEKA-GLYYMASVKEINKPHEFIFPYYGLGQV 351
                T   P  + ++ +  ++    G YE A   Y  A+  E +        +  LG+ 
Sbjct: 418 CYTQATTLAPKDASAWNDRGKAMFHLGRYEHALDCYRKATQLEPS----LSDAWNNLGKT 473

Query: 352 QLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQ 411
           Q KLG F +A++++E+   +YP+       LG     L + E A     +  +I P+  Q
Sbjct: 474 QFKLGKFETAISSYEQATRLYPEFYTAWNNLGVAQFHLQRYEAAIASYERTLQIQPQFHQ 533

Query: 412 AFIDLGELLIS-SDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQS 470
           A+ + G      S    AL ++   RTL  K       +  NN+G + F  G +E A  S
Sbjct: 534 AWYNKGMAQFHLSQYDRALASYD--RTLKLKPDY---YQAWNNLGFVLFHLGRYEEAISS 588

Query: 471 FKDAL 475
           +   L
Sbjct: 589 YNHTL 593



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 41/134 (30%), Positives = 71/134 (52%), Gaps = 6/134 (4%)

Query: 343 FPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKA 402
           F +Y  G+   +LG +  AL  +++ LEI PD+  TL   G +   +GQ++ A     ++
Sbjct: 193 FAWYQKGRALFELGSYDRALAAYDRALEISPDDSLTLSNKGWLLFHIGQVQAACGCYEQS 252

Query: 403 AKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEK 461
             IDP D  A+ + G++L       AA+DA++ A  L  +       +  NN+GV HFE+
Sbjct: 253 LHIDPSDRFAWNNHGQVLFQLGQIRAAIDAYQKALELDSQF-----YQAWNNLGVAHFEQ 307

Query: 462 GEFESAHQSFKDAL 475
             F+ A + ++ A+
Sbjct: 308 KSFQDALRCYRAAI 321



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 88/380 (23%), Positives = 150/380 (39%), Gaps = 53/380 (13%)

Query: 93  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 152
           + Y G I     E E     A + Y   +++       W  +G +LL     ++A + + 
Sbjct: 365 WNYCGNILFHLGELEP----ALRRYEMVTKLQPQLAEGWSNRGNVLLLLDRPQEALTCYT 420

Query: 153 IVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQ 212
                   +  A   +    F+ GRY  +L+ Y++A Q+ PS   A    +G  ++KLG+
Sbjct: 421 QATTLAPKDASAWNDRGKAMFHLGRYEHALDCYRKATQLEPSLSDAWN-NLGKTQFKLGK 479

Query: 213 LGKARQAFQRALQLDPENVEALVALAV--MDLQANEAA-----------------GIRKG 253
              A  ++++A +L PE   A   L V    LQ  EAA                    KG
Sbjct: 480 FETAISSYEQATRLYPEFYTAWNNLGVAQFHLQRYEAAIASYERTLQIQPQFHQAWYNKG 539

Query: 254 MEKMQ------------RAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH- 300
           M +              R  ++ P    A N L    F  G++       E A++  NH 
Sbjct: 540 MAQFHLSQYDRALASYDRTLKLKPDYYQAWNNLGFVLFHLGRY-------EEAISSYNHT 592

Query: 301 ---GPTKSHSYYNLARSYHSKG-DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLG 356
               P    ++YN   +   +G D E    Y  A   + N P    + ++  G+   KL 
Sbjct: 593 LKLNPEFYPAWYNHGMTLAHQGRDAEAIESYDKALGFQPNDP----YLWHSRGRALAKLE 648

Query: 357 DFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDL 416
               ALT F++ ++I P+N E     G     LG+   A E   +  ++ P+D + +   
Sbjct: 649 RHAEALTCFDRSIDILPENYEPWYDRGQSLAALGRYTTALESYDRTLQLRPKDPEIWHSY 708

Query: 417 GELL-ISSDTGAALDAFKTA 435
           G +  +  +  AAL+++  A
Sbjct: 709 GIVQGLRQEYTAALESYDRA 728



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 94/417 (22%), Positives = 168/417 (40%), Gaps = 56/417 (13%)

Query: 80   YERIAILNA-LGVYYTYLGKIETK-QREKEEHFILATQYYNKASRIDMHEPSTWVGKGQL 137
            Y++   LNA   + + + GK   K QR  E     A   Y +A  ++  +  +W   G  
Sbjct: 827  YQQALKLNASAAIVWHFQGKTLLKLQRYAE-----ALTVYERAIELNSEDYHSWNDLGLT 881

Query: 138  LLAKGEVEQASSAFKIVLEADRDNVPAL--LGQACVEFNRGRYSDSLEFYKRALQVHPSC 195
                G  E A  +++  +E   D  PA   LG+   +   G    +   Y+RA+  HP  
Sbjct: 882  FAHLGRSEDAIDSYRQAIELQPDYHPAWHNLGKELTQL--GDTDGASAAYERAIAYHPQ- 938

Query: 196  PGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV--ALAVMDLQANEAA----- 248
                  G+G   ++LG+L +A  A+++   L P+  EA      A+  LQ  E A     
Sbjct: 939  DADTWYGMGNLLWQLGELSEAMFAYEQVTNLKPDRAEAWYRQGKALQALQQWERAVTCYE 998

Query: 249  -----------------GIRKGMEKMQRAFEIYPYCAMALN-YLANHFFFTGQHFLVEQL 290
                              +   + + Q A   Y   A+ LN   A+ ++  GQ       
Sbjct: 999  RVTTLTNPSYDLCYSHGQVLTKLNRHQEALACYE-LALTLNKNAADAWYAKGQTLAALNR 1057

Query: 291  TETALAVTNHG----PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYY 346
             E A +         P      YN +R   ++GD+E A L       E++  +  I+  +
Sbjct: 1058 WEDANSCYERALSLDPQNQSILYNQSRVQAAQGDWETA-LVACCQAIELDPDNPEIWTQH 1116

Query: 347  GLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKID 406
            G  Q+ ++LG++ +A+ + +    I P++  +   LG      G+   A    R+A +++
Sbjct: 1117 G--QISIELGNYNTAVASLQTATGIAPESARSWALLGKAEYHRGEFVAALAAYRQALELE 1174

Query: 407  PRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGE 463
            P  A+ + D G LL        L+ ++ A     +A E  P     N  +  +++G+
Sbjct: 1175 PHRAETWYDRGYLL------GQLERWEDALISYDRATESDP-----NYALAWYQRGQ 1220



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 90/388 (23%), Positives = 150/388 (38%), Gaps = 37/388 (9%)

Query: 98   KIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQA----SSAFKI 153
            +++  Q + E   +   Q    A  +D   P  W   GQ+ +  G    A     +A  I
Sbjct: 1084 RVQAAQGDWETALVACCQ----AIELDPDNPEIWTQHGQISIELGNYNTAVASLQTATGI 1139

Query: 154  VLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCR-YKLGQ 212
              E+ R    ALLG+A  E++RG +  +L  Y++AL++ P      R      R Y LGQ
Sbjct: 1140 APESARSW--ALLGKA--EYHRGEFVAALAAYRQALELEPH-----RAETWYDRGYLLGQ 1190

Query: 213  LGKARQA---FQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAM 269
            L +   A   + RA + DP    A         Q +E     + ++  QRA  + P    
Sbjct: 1191 LERWEDALISYDRATESDPNYALAWYQRGQAQFQLHEDPA--ENLQSYQRALTLDPNHPA 1248

Query: 270  ALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYM 329
            A     N  F  G+     +  E AL +      K   YY      +  G  ++      
Sbjct: 1249 AWYQQGNLLFQLGRLEAAVESYERALQL------KPEDYYIWNNHGNVLGSLKRYDCAIE 1302

Query: 330  ASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQL 389
            +  K +    EF   ++  G+    L  +  A    E+ LEI+P N +     G     +
Sbjct: 1303 SYDKALALKPEFYQSWHNRGKALFHLKRYEEAAAAHERSLEIHPHNAQIWNGRGMALQHI 1362

Query: 390  GQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP-- 447
            G  ++A     ++ +ID  D Q +++ G  L        L  ++ A           P  
Sbjct: 1363 GCWQEALACYERSIEIDKLDPQVWLNRGTALFH------LHKYEDAIACYDNCAILNPDE 1416

Query: 448  IEVLNNIGVIHFEKGEFESAHQSFKDAL 475
            ++  +  G+   E G +++A  SF  AL
Sbjct: 1417 LQAYHYRGIASLELGRWDAAVASFDRAL 1444



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 138/651 (21%), Positives = 242/651 (37%), Gaps = 99/651 (15%)

Query: 177  RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVA 236
            RY+++L  Y+RA++++     +    +GL    LG+   A  ++++A++L P+   A   
Sbjct: 853  RYAEALTVYERAIELNSEDYHSWN-DLGLTFAHLGRSEDAIDSYRQAIELQPDYHPAWHN 911

Query: 237  LAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALA 296
            L     Q  +  G     E   RA   +P  A     + N  +  G+      L+E   A
Sbjct: 912  LGKELTQLGDTDGASAAYE---RAIAYHPQDADTWYGMGNLLWQLGE------LSEAMFA 962

Query: 297  ---VTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQL 353
               VTN  P ++ ++Y   ++  +   +E+A   Y       N  ++     Y  GQV  
Sbjct: 963  YEQVTNLKPDRAEAWYRQGKALQALQQWERAVTCYERVTTLTNPSYDLC---YSHGQVLT 1019

Query: 354  KLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAF 413
            KL   + AL  +E  L +  +  +   A G     L + E A     +A  +DP++    
Sbjct: 1020 KLNRHQEALACYELALTLNKNAADAWYAKGQTLAALNRWEDANSCYERALSLDPQNQSIL 1079

Query: 414  IDLGELLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSF 471
             +       S   AA   ++TA     +A E  P   E+    G I  E G + +A  S 
Sbjct: 1080 YN------QSRVQAAQGDWETALVACCQAIELDPDNPEIWTQHGQISIELGNYNTAVASL 1133

Query: 472  KDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDG------NHVELPWNKV 525
            + A G      +     +++ +   A          +HR E           +EL  ++ 
Sbjct: 1134 QTATG------IAPESARSWALLGKAE---------YHRGEFVAALAAYRQALELEPHRA 1178

Query: 526  TVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQL------SI 579
               ++   LL Q+     A     LI +      D    LA   + +   QL      ++
Sbjct: 1179 ETWYDRGYLLGQLERWEDA-----LISYDRATESDPNYALAWYQRGQAQFQLHEDPAENL 1233

Query: 580  ELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNW-- 637
            +    AL ++  +P A    G+L  +      A E++  A      +D Y   + GN   
Sbjct: 1234 QSYQRALTLDPNHPAAWYQQGNLLFQLGRLEAAVESYERALQ-LKPEDYYIWNNHGNVLG 1292

Query: 638  ---NYFAALRNEKRAPKLEAT-------------HL---EKAKELYTRVIVQHTSNLYAA 678
                Y  A+ +  +A  L+               HL   E+A   + R +  H  N    
Sbjct: 1293 SLKRYDCAIESYDKALALKPEFYQSWHNRGKALFHLKRYEEAAAAHERSLEIHPHNAQIW 1352

Query: 679  NGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQ 738
            NG G+ L   G +  +   + +  E     +    P VW+N     F    +  A+  Y 
Sbjct: 1353 NGRGMALQHIGCWQEALACYERSIE-----IDKLDPQVWLNRGTALFHLHKYEDAIACYD 1407

Query: 739  NC-------LRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPS 782
            NC       L+ ++Y   A +         E  +W     S  RA+ L+P+
Sbjct: 1408 NCAILNPDELQAYHYRGIASL---------ELGRWDAAVASFDRALTLSPA 1449



 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 83/367 (22%), Positives = 142/367 (38%), Gaps = 65/367 (17%)

Query: 131 WVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQ 190
           W   G +L   G  E+A S++   L+ + +  PA         ++GR ++++E Y +AL 
Sbjct: 569 WNNLGFVLFHLGRYEEAISSYNHTLKLNPEFYPAWYNHGMTLAHQGRDAEAIESYDKALG 628

Query: 191 VHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE-------ALVALA----- 238
             P+ P  +    G    KL +  +A   F R++ + PEN E       +L AL      
Sbjct: 629 FQPNDP-YLWHSRGRALAKLERHAEALTCFDRSIDILPENYEPWYDRGQSLAALGRYTTA 687

Query: 239 -----------VMDLQANEAAGIRKG--------MEKMQRAFEIYPYCAMALNYLANHFF 279
                        D +   + GI +G        +E   RA  I P    +     N   
Sbjct: 688 LESYDRTLQLRPKDPEIWHSYGIVQGLRQEYTAALESYDRALAINPNFYQSWYERGNALA 747

Query: 280 FTGQHFLVEQLTETALAV-TNHGPT---KSHSYYNLARSYHSKGDYEKA----------- 324
             G+H       + A+A+  +  P    K  S + L R   +   Y+ A           
Sbjct: 748 ELGRHEYAITNYDRAIAILPSFAPASQGKGQSLFKLQRYAEAIASYDLALTTAPDSFDCW 807

Query: 325 ---------------GLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVL 369
                           LY      ++N     ++ +   G+  LKL  +  ALT +E+ +
Sbjct: 808 CQRGYAFWHLESWDEALYSYQQALKLNASAAIVWHF--QGKTLLKLQRYAEALTVYERAI 865

Query: 370 EIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG-ELLISSDTGAA 428
           E+  ++  +   LG  +  LG+ E A +  R+A ++ P    A+ +LG EL    DT  A
Sbjct: 866 ELNSEDYHSWNDLGLTFAHLGRSEDAIDSYRQAIELQPDYHPAWHNLGKELTQLGDTDGA 925

Query: 429 LDAFKTA 435
             A++ A
Sbjct: 926 SAAYERA 932



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 70/338 (20%), Positives = 140/338 (41%), Gaps = 27/338 (7%)

Query: 123  IDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSL 182
            I  H    W G+G  L   G  ++A + ++  +E D+ +    L +    F+  +Y D++
Sbjct: 1344 IHPHNAQIWNGRGMALQHIGCWQEALACYERSIEIDKLDPQVWLNRGTALFHLHKYEDAI 1403

Query: 183  EFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEA-------LV 235
              Y     ++P    A     G+   +LG+   A  +F RAL L P   E         V
Sbjct: 1404 ACYDNCAILNPDELQAYHYR-GIASLELGRWDAAVASFDRALTLSPALDEPEDRVRSQSV 1462

Query: 236  ALAVMDLQAN----------EAAGIRKGMEKMQRAFEIYPYCAMAL-NYLANHFFFTGQH 284
             +    L A+          +   +   +   ++A ++ P   +   N  A H     Q+
Sbjct: 1463 PVGKSPLTASTWNSRGTALFQLGNLEGALHSYRQATKVAPEDPLGWTNQGATHLNLQ-QY 1521

Query: 285  FLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFP 344
                Q  +T+L +       + ++Y  A S  + G  + A    ++  K +    +FI  
Sbjct: 1522 AEALQCYQTSLKID---ANDAATWYKQAISQQALGRLDAA---IISLTKAVEIDPQFILA 1575

Query: 345  YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAK 404
             Y  G + L   +F +ALT++E  L + PD      + G+  ++L  ++ A    ++A  
Sbjct: 1576 RYRRGNIYLLQREFEAALTDYEVTLNLDPDRAAAWNSRGNCLLELKILDNALFSFQQATG 1635

Query: 405  IDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKK 441
            ++P +++ + + G    S      A + ++ AR+L ++
Sbjct: 1636 LEPENSEYWFNQGRAHSSLQQWEEAENCYQQARSLTQR 1673



 Score = 53.1 bits (126), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 77/370 (20%), Positives = 138/370 (37%), Gaps = 66/370 (17%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
           A + Y+KA     ++P  W  +G+ L       +A + F   ++   +N      +    
Sbjct: 619 AIESYDKALGFQPNDPYLWHSRGRALAKLERHAEALTCFDRSIDILPENYEPWYDRGQSL 678

Query: 173 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDP---- 228
              GRY+ +LE Y R LQ+ P  P  I    G+ +    +   A +++ RAL ++P    
Sbjct: 679 AALGRYTTALESYDRTLQLRPKDP-EIWHSYGIVQGLRQEYTAALESYDRALAINPNFYQ 737

Query: 229 ---ENVEALV--------------ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMAL 271
              E   AL               A+A++   A  + G  + + K+QR  E      +AL
Sbjct: 738 SWYERGNALAELGRHEYAITNYDRAIAILPSFAPASQGKGQSLFKLQRYAEAIASYDLAL 797

Query: 272 NYLANHF-------------------------------------FFTGQHFLVEQLTETA 294
               + F                                      F G+  L  Q    A
Sbjct: 798 TTAPDSFDCWCQRGYAFWHLESWDEALYSYQQALKLNASAAIVWHFQGKTLLKLQRYAEA 857

Query: 295 LAVTNHG----PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQ 350
           L V            HS+ +L  ++   G  E A   Y  +++     H     ++ LG+
Sbjct: 858 LTVYERAIELNSEDYHSWNDLGLTFAHLGRSEDAIDSYRQAIELQPDYHP---AWHNLGK 914

Query: 351 VQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDA 410
              +LGD   A   +E+ +  +P + +T   +G++  QLG++ +A     +   + P  A
Sbjct: 915 ELTQLGDTDGASAAYERAIAYHPQDADTWYGMGNLLWQLGELSEAMFAYEQVTNLKPDRA 974

Query: 411 QAFIDLGELL 420
           +A+   G+ L
Sbjct: 975 EAWYRQGKAL 984



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 100/481 (20%), Positives = 174/481 (36%), Gaps = 98/481 (20%)

Query: 80   YERIAILNALGVYYT----YLGKIETKQREKE------------EHFILATQYYNKASRI 123
            Y+R   L ALG Y T    Y   ++ + ++ E            + +  A + Y++A  I
Sbjct: 672  YDRGQSLAALGRYTTALESYDRTLQLRPKDPEIWHSYGIVQGLRQEYTAALESYDRALAI 731

Query: 124  DMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLE 183
            + +   +W  +G  L   G  E A + +   +       PA  G+    F   RY++++ 
Sbjct: 732  NPNFYQSWYERGNALAELGRHEYAITNYDRAIAILPSFAPASQGKGQSLFKLQRYAEAIA 791

Query: 184  FYKRALQVHP------------------------SCPGAIRLGI---------GLCRYKL 210
             Y  AL   P                        S   A++L           G    KL
Sbjct: 792  SYDLALTTAPDSFDCWCQRGYAFWHLESWDEALYSYQQALKLNASAAIVWHFQGKTLLKL 851

Query: 211  GQLGKARQAFQRALQLDPENVEAL--VALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCA 268
             +  +A   ++RA++L+ E+  +   + L    L  +E A     ++  ++A E+ P   
Sbjct: 852  QRYAEALTVYERAIELNSEDYHSWNDLGLTFAHLGRSEDA-----IDSYRQAIELQPDYH 906

Query: 269  MALNYLANHF-------------------------FFTGQHFLVEQLTETALA------V 297
             A + L                              + G   L+ QL E + A      V
Sbjct: 907  PAWHNLGKELTQLGDTDGASAAYERAIAYHPQDADTWYGMGNLLWQLGELSEAMFAYEQV 966

Query: 298  TNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGD 357
            TN  P ++ ++Y   ++  +   +E+A   Y       N  ++     Y  GQV  KL  
Sbjct: 967  TNLKPDRAEAWYRQGKALQALQQWERAVTCYERVTTLTNPSYDLC---YSHGQVLTKLNR 1023

Query: 358  FRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 417
             + AL  +E  L +  +  +   A G     L + E A     +A  +DP++     +  
Sbjct: 1024 HQEALACYELALTLNKNAADAWYAKGQTLAALNRWEDANSCYERALSLDPQNQSILYN-- 1081

Query: 418  ELLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDAL 475
                 S   AA   ++TA     +A E  P   E+    G I  E G + +A  S + A 
Sbjct: 1082 ----QSRVQAAQGDWETALVACCQAIELDPDNPEIWTQHGQISIELGNYNTAVASLQTAT 1137

Query: 476  G 476
            G
Sbjct: 1138 G 1138


>gi|20090471|ref|NP_616546.1| hypothetical protein MA1613 [Methanosarcina acetivorans C2A]
 gi|19915489|gb|AAM05026.1| TPR-domain containing protein [Methanosarcina acetivorans C2A]
          Length = 1885

 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 76/259 (29%), Positives = 120/259 (46%), Gaps = 19/259 (7%)

Query: 145  EQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIG 204
            E+A  A  +VLE +  +  AL   A V FN   Y ++   +++ L+  P  P ++   +G
Sbjct: 1611 ERALQALDLVLEREPAHRDALYNMALVLFNLEEYEEAARTFEQLLEASPEDPESLNY-LG 1669

Query: 205  LCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIY 264
            LC  +L  L +A +AF++A   +P+N EAL   A   ++ N    I++ +    R  EI 
Sbjct: 1670 LCLLELEDLKEALKAFEKAALFNPKNEEALYNAATTLIKLNR---IQESLGYFDRILEIS 1726

Query: 265  PYCAMALNYLANHFFFTGQHFLVEQLTETALAVTN---HGPTKSHSYYNLARSYHSKGDY 321
            P    A+NY    F       ++EQ  E   +  N     P    + YN+      +  Y
Sbjct: 1727 PENYDAMNYKGVAFC------MLEQYREALKSFDNVLKKDPNNIKAVYNVGVVCFKQKLY 1780

Query: 322  EKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKA 381
            E A   +  ++  IN  HE    Y GL     K GD+  AL  FEK+L I P + + +  
Sbjct: 1781 ETAARAFKEALT-INPWHEPSLRYLGLSLA--KTGDYEDALKAFEKLLRIKPQDPQAMNY 1837

Query: 382  LGHIYVQLGQIEKAQELLR 400
             G   V LG++EK  E ++
Sbjct: 1838 RG---VLLGKLEKYGEAIK 1853



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 97/405 (23%), Positives = 170/405 (41%), Gaps = 28/405 (6%)

Query: 106 KEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPAL 165
           K ++F  A + + + + +D      W  +G+LL   G+ E+A   F  +LE   D   A 
Sbjct: 357 KLQNFPEAARSFARVTELDPGNTDAWFQQGRLLARAGKYEEALETFDRLLEYHPDFTEAQ 416

Query: 166 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 225
             +  V    GR+ ++LE   ++L+  P     + +  GL    +G+   A +AF+ A  
Sbjct: 417 KFRGTVLTGLGRFEEALESLTKSLEKEPENYN-MWIQKGLLLLDIGKFEPALEAFENAAG 475

Query: 226 LDPENVEALV--ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQ 283
           L P++    +    A+  L+  E A     +E  +    + PY     N         G+
Sbjct: 476 LKPDDEICWMNRGFALYSLECYEEA-----LEAFKEGLHLNPYLEKGWN---KKGIVLGK 527

Query: 284 HFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIF 343
               E+  E         P    ++ N+     +  +YEKA   +   +K    P + + 
Sbjct: 528 LGKTEEALEAFEEAVKLRPDFEDAWKNMGLLLFASEEYEKAEEAFAEVLK--TNPED-LD 584

Query: 344 PYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAA 403
             Y  G   L+LG   +AL   EKV+ + PD  +   +LG   ++LG++EKA E   K A
Sbjct: 585 ALYNRGISLLRLGRNETALEYLEKVVSLSPDYPDLAYSLGVALMELGELEKALETFEKLA 644

Query: 404 KIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKG 462
             +P D +     G+L +   +   AL AF+  + LL+K G     E     G+      
Sbjct: 645 AKNPEDLEIQCRKGKLAMELGEHETALQAFE--KVLLEKPGSR---EAWYRKGLALLNME 699

Query: 463 EFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQL 507
            FE A ++F +         ++ + TK    + + ++  F  MQL
Sbjct: 700 RFEDAVKAFDE--------VIVRNTTKDPSYEDAGTLKGFAQMQL 736



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 92/374 (24%), Positives = 166/374 (44%), Gaps = 35/374 (9%)

Query: 118  NKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGR 177
            +K S  ++ +  T +G  QL   +   E A   F+ +LE +  +         V     +
Sbjct: 1447 SKISDPELEDAWTKIGLAQLKTRR--YEDAFDTFEKILEKNPTDADVWYLSGLVMRGLDQ 1504

Query: 178  YSDSLEFYKRALQVHPSCPGAI-RLGIGL---CRYKLGQLGKARQAFQRALQLDPENVEA 233
              +++E +++AL+++P+   A+ + G+GL   CRY+     +AR AF  AL L+PENV+ 
Sbjct: 1505 NEEAVEVFEKALELNPALTAALEQKGLGLLALCRYE-----EARDAFGSALALNPENVDI 1559

Query: 234  LVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTET 293
            L + AV   +  +     K +E++      +P    A        +  G   +  Q  E 
Sbjct: 1560 LYSRAVASYKLLDFEEASKDLERLLLFAPGFPDYTKAC-------YMLGIASIELQDYER 1612

Query: 294  ALA----VTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK-EINKPHEFIFPYYGL 348
            AL     V    P    + YN+A    +  +YE+A   +   ++     P    +    L
Sbjct: 1613 ALQALDLVLEREPAHRDALYNMALVLFNLEEYEEAARTFEQLLEASPEDPESLNY----L 1668

Query: 349  GQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPR 408
            G   L+L D + AL  FEK     P N E L       ++L +I+++     +  +I P 
Sbjct: 1669 GLCLLELEDLKEALKAFEKAALFNPKNEEALYNAATTLIKLNRIQESLGYFDRILEISPE 1728

Query: 409  --DAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFES 466
              DA  +  +   ++        +A K+   +LKK      I+ + N+GV+ F++  +E+
Sbjct: 1729 NYDAMNYKGVAFCMLEQYR----EALKSFDNVLKKDPNN--IKAVYNVGVVCFKQKLYET 1782

Query: 467  AHQSFKDALGDGIW 480
            A ++FK+AL    W
Sbjct: 1783 AARAFKEALTINPW 1796



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 95/377 (25%), Positives = 164/377 (43%), Gaps = 28/377 (7%)

Query: 106 KEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPA 164
           K E +  A + + +A  I       W  KG L+LAK E  E A   F  ++     +  A
Sbjct: 153 KAERYEEALEDFERALEISPRNSEAWYAKG-LILAKIEKYENALECFDFLIREKPKDTAA 211

Query: 165 LLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRAL 224
           L  +  +  N G+  ++L   +  L+  P+   A+    G+   +L +   A +   + L
Sbjct: 212 LEQKCLILANLGKNEEALGALEDFLKKFPANEAAL-YHKGILLSELSRYEDAERTISKVL 270

Query: 225 QLDPENVEALVALA---VMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFT 281
           +L+P + EA        V  L+ NEA      +E    A  + P    A NY     F  
Sbjct: 271 KLNPGHREAWFRKGFALVQLLRLNEA------IEAFDEAIRLDPAYFEAWNY---KCFAL 321

Query: 282 GQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEF 341
            +  + E+  E    +    P     +YN A +     ++ +A   + A V E++  +  
Sbjct: 322 MKLEVYEEALEAFDTILETYPDMEEIWYNRALALLKLQNFPEAARSF-ARVTELDPGN-- 378

Query: 342 IFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRK 401
              ++  G++  + G +  AL  F+++LE +PD  E  K  G +   LG+ E+A E L K
Sbjct: 379 TDAWFQQGRLLARAGKYEEALETFDRLLEYHPDFTEAQKFRGTVLTGLGRFEEALESLTK 438

Query: 402 AAKIDPRDAQAFIDLGELLISSDTG---AALDAFKTARTLLKKAGEEVPIEVLNNIGVIH 458
           + + +P +   +I  G LL+  D G    AL+AF+ A  L  K  +E+      N G   
Sbjct: 439 SLEKEPENYNMWIQKGLLLL--DIGKFEPALEAFENAAGL--KPDDEI---CWMNRGFAL 491

Query: 459 FEKGEFESAHQSFKDAL 475
           +    +E A ++FK+ L
Sbjct: 492 YSLECYEEALEAFKEGL 508



 Score = 48.1 bits (113), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 60/194 (30%), Positives = 84/194 (43%), Gaps = 14/194 (7%)

Query: 43   WLIIAREYFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETK 102
            W  I     K GK E+  + L++    EID  + D+      I   LG+    LG  E  
Sbjct: 951  WYFIGMSCSKLGKHEEASKALKKAL--EIDPAFRDLH----DIYYRLGLSCFELGNFEEA 1004

Query: 103  QREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNV 162
             +  EE   L+T   N     D  +   +  K   LL  G   +A S FK VL  D  N 
Sbjct: 1005 LKAFEE--ALSTVPENSERNPDEAQDIMY-KKSLSLLRLGRYAEAESGFKEVLALDPANT 1061

Query: 163  PAL--LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAF 220
             AL  L  AC  F +G Y ++LE ++R L  +P+    I    GL     G+  +A +AF
Sbjct: 1062 EALAHLSTAC--FKKGHYKEALEIFERVLSQNPA-RKTILFRKGLALKAFGKNLEALEAF 1118

Query: 221  QRALQLDPENVEAL 234
               L+L P+   AL
Sbjct: 1119 DLVLKLKPDCTYAL 1132



 Score = 47.4 bits (111), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 59/246 (23%), Positives = 101/246 (41%), Gaps = 17/246 (6%)

Query: 198 AIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV--ALAVMDLQANEAAGIRKGME 255
           A + G+ L + K  +  KA   F + L  DP++ EAL    LA+++ +  + A     ++
Sbjct: 8   AFQRGLDLVKRK--RYEKAINTFNKILDKDPDHKEALFHRGLALLETEKTQEA-----LD 60

Query: 256 KMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSY 315
               A ++ P  + AL      F   G+    E+  E   +     P     +Y +  ++
Sbjct: 61  SFNDALQLEPGNSDALYRKGTCFAALGR---FEEALEAYESALESSPDTPEIWYMMGLAF 117

Query: 316 HSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDN 375
               + E+A    +   K +    E+      +G V  K   +  AL +FE+ LEI P N
Sbjct: 118 ---AEMERAEASILCFEKALELKPEYTAACCAMGTVAGKAERYEEALEDFERALEISPRN 174

Query: 376 CETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTA 435
            E   A G I  ++ + E A E      +  P+D  A     + LI ++ G   +A    
Sbjct: 175 SEAWYAKGLILAKIEKYENALECFDFLIREKPKDTAALEQ--KCLILANLGKNEEALGAL 232

Query: 436 RTLLKK 441
              LKK
Sbjct: 233 EDFLKK 238



 Score = 47.0 bits (110), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 99/391 (25%), Positives = 161/391 (41%), Gaps = 47/391 (12%)

Query: 122  RIDMHEPST---WVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPA------LLGQACVE 172
            ++ + +P +   W  KG  LL     E A  AF  V+  +    P+      L G A ++
Sbjct: 676  KVLLEKPGSREAWYRKGLALLNMERFEDAVKAFDEVIVRNTTKDPSYEDAGTLKGFAQMQ 735

Query: 173  FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 232
               G +  +LE ++ AL+ +P   G      GL   +L +  +A +AF+ AL+L+PE  +
Sbjct: 736  L--GNFLPALETFEGALEKNPDS-GITWYYKGLTLQELQRQEEAARAFESALRLNPEFSD 792

Query: 233  ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF-LVEQLT 291
            A    AV   +  +       +E ++   E  P     LN  A  F   G+H   VE L+
Sbjct: 793  AFEYRAVCLFKTGQ---YETALEALEALLENDPENLSTLNSRAICFLELGRHKEAVEALS 849

Query: 292  ETALAVTNHGPTK---SHSYYNLARSYHSKGDYEKAGLYYM------------ASVKEIN 336
                       TK     + + L   Y   G Y++A   +             AS +E  
Sbjct: 850  NLLEINPEREETKFRLDEAKFRLGIEYFELGRYDEAFPLFEGINEEVKAKNGEASGEESE 909

Query: 337  KPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQ 396
              H+   P Y  G + ++   +  AL  F K+ E  P   E    +G    +LG+ E+A 
Sbjct: 910  NSHK-DSPLYWKGLMFIRQEAYEKALEIFSKLTEQNPQFAEGWYFIGMSCSKLGKHEEAS 968

Query: 397  ELLRKAAKIDPRDAQAFIDLGEL-----LISSDTG---AALDAFKTARTLLKKAGEEVPI 448
            + L+KA +IDP    AF DL ++     L   + G    AL AF+ A + + +  E  P 
Sbjct: 969  KALKKALEIDP----AFRDLHDIYYRLGLSCFELGNFEEALKAFEEALSTVPENSERNPD 1024

Query: 449  E---VLNNIGVIHFEKGEFESAHQSFKDALG 476
            E   ++    +     G +  A   FK+ L 
Sbjct: 1025 EAQDIMYKKSLSLLRLGRYAEAESGFKEVLA 1055



 Score = 42.7 bits (99), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 66/297 (22%), Positives = 113/297 (38%), Gaps = 48/297 (16%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDN--VPALLGQAC 170
           A   +N A +++         KG    A G  E+A  A++  LE+  D   +  ++G A 
Sbjct: 58  ALDSFNDALQLEPGNSDALYRKGTCFAALGRFEEALEAYESALESSPDTPEIWYMMGLAF 117

Query: 171 VEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPEN 230
            E  R     S+  +++AL++ P    A    +G    K  +  +A + F+RAL++ P N
Sbjct: 118 AEMERAE--ASILCFEKALELKPEYTAAC-CAMGTVAGKAERYEEALEDFERALEISPRN 174

Query: 231 VEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQL 290
            EA  A  +          I   +EK + A E +             F    +      L
Sbjct: 175 SEAWYAKGL----------ILAKIEKYENALECF------------DFLIREKPKDTAAL 212

Query: 291 TETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQ 350
            +  L + N G  K+         +  K    +A LY+                    G 
Sbjct: 213 EQKCLILANLG--KNEEALGALEDFLKKFPANEAALYHK-------------------GI 251

Query: 351 VQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 407
           +  +L  +  A     KVL++ P + E     G   VQL ++ +A E   +A ++DP
Sbjct: 252 LLSELSRYEDAERTISKVLKLNPGHREAWFRKGFALVQLLRLNEAIEAFDEAIRLDP 308


>gi|343127514|ref|YP_004777445.1| hypothetical protein BbiDN127_0191 [Borrelia bissettii DN127]
 gi|342222202|gb|AEL18380.1| tetratricopeptide repeat family protein [Borrelia bissettii DN127]
          Length = 379

 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 76/318 (23%), Positives = 135/318 (42%), Gaps = 14/318 (4%)

Query: 123 IDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSL 182
           +D+ E S    +G  L+ +  + +A S F  +LE D +N  AL+G   +E  +  Y  ++
Sbjct: 22  LDVTEKSK---RGYQLIKEERLSEAESLFSDILEKDNENNYALVGLGDIERKKNNYDKAI 78

Query: 183 EFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDL 242
            +Y++ L  HPS   A+  G+G C   L    KA   ++  L+ DPEN+  L  +A    
Sbjct: 79  VYYQKCLVKHPSNNYAL-FGLGDCYRNLDNYKKATDIWEEYLKYDPENITVLTRVAA--- 134

Query: 243 QANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGP 302
              +    +K  +   +  E+ P    AL  +  H ++  + +         +   N   
Sbjct: 135 SYRKLKNFQKSKQTYLKVMELMPENDYALVGIG-HLYYDFKEYKEALKYWLKMYELNQSK 193

Query: 303 TKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSAL 362
                  ++   Y    ++ + G+Y+     EI+ P  F +  +GL        +++ AL
Sbjct: 194 VDVRVLTSIGNCYRKLREFTR-GIYFFKKALEIS-PSNF-YAVFGLADCYRGNKEYKEAL 250

Query: 363 TNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS 422
             +  ++E  P N   L  +G  Y  L   E +Q   +KA  +   D   F  LG  LI 
Sbjct: 251 KYWLDIIEKDPKNNLVLTRVGDAYRYLNDYENSQIYYKKALDV---DFDMFAILGLALIQ 307

Query: 423 SDTGAALDAFKTARTLLK 440
            D G   +A    ++L+K
Sbjct: 308 KDQGKYEEALIAIKSLIK 325


>gi|422293912|gb|EKU21212.1| tpr repeat nuclear phosphoprotein, partial [Nannochloropsis
           gaditana CCMP526]
          Length = 385

 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 81/273 (29%), Positives = 132/273 (48%), Gaps = 36/273 (13%)

Query: 4   VYIPVQNSE--EEVRVALDQLPRDASD------ILDILKAEQAPLDLWLIIAREYFKQGK 55
           + IP++ S+  E V +  + LP D SD      IL IL+AE A  D+W  +A  Y+ +G+
Sbjct: 9   IIIPIRGSQRAECVHLLAEDLP-DVSDSAEFDAILQILQAEFALPDVWADVAEAYYCKGR 67

Query: 56  VEQFRQIL--------EEGSSPEIDEYYA----DVRYERIAILNALGVYYTYLGKIETKQ 103
            + FRQ+L        E G   E++        + R   + + N LG   T    I+ K+
Sbjct: 68  PDLFRQVLHLLRDGLKEAGVQEEMEGNTEAQKREFRRGLVRVYNMLGALATQEA-IKFKR 126

Query: 104 REKEEHFI----LATQYYNKASRIDMHEPSTWVGKGQL---LLAKGEVEQASSAFK-IVL 155
            E EE  +    +A    + A  +  +   T + KG +   L A    + A   F   + 
Sbjct: 127 AEDEERRMEMWDVAKHNLDVADTVVQYAEPTLLNKGWMAMNLSAGSTWKHAKYLFNNAIT 186

Query: 156 EADR---DNVPALLGQACVEFNRGRYSD---SLEFYKRALQVHPSCPGAIRLGIGLCRYK 209
           EA+     N+ A+LG A   F+    ++   + +     ++ HP CP  +R+G GLC Y+
Sbjct: 187 EANNRGGQNLMAMLGLAIHAFHVNTPAELRRARKLLGEVIRRHPQCPAEVRVGFGLCCYR 246

Query: 210 LGQLGKARQAFQRALQLDPENVEALVALAVMDL 242
           LG++ +A+ AF+RAL L   N  A++ALA  +L
Sbjct: 247 LGEVDRAKAAFKRALVLSRGNRFAMLALARAEL 279


>gi|334121332|ref|ZP_08495403.1| Tetratricopeptide TPR_1 repeat-containing protein [Microcoleus
           vaginatus FGP-2]
 gi|333455148|gb|EGK83806.1| Tetratricopeptide TPR_1 repeat-containing protein [Microcoleus
           vaginatus FGP-2]
          Length = 1075

 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 76/276 (27%), Positives = 126/276 (45%), Gaps = 10/276 (3%)

Query: 142 GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 201
           G ++ A +AF+  LE D     A  G      + GR S+++  +++AL++ P    A   
Sbjct: 196 GNLKGAIAAFEKALEIDPKFHHAWNGLGAPLNDLGRNSEAIAAFEKALEIDPKEHIAWH- 254

Query: 202 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 261
           G+G+    LG+  +A  AF++AL++DP+   A   L +     N      + +   ++A 
Sbjct: 255 GLGITLNALGRNSEAIAAFEKALEIDPKEHIAWHGLGIT---LNALGRNSEAIAAFEKAL 311

Query: 262 EIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDY 321
           EI P   +A   L N     G++       + AL +    P   H++  L    +  G Y
Sbjct: 312 EIDPKAHIAWKGLGNALNALGRNSEAIAAFKKALEID---PKFHHAWNGLGAPLNDLGRY 368

Query: 322 EKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKA 381
            +A     A  K +    +F F ++GLG V   LG +  A+  +EK LEI P        
Sbjct: 369 SEA---IAAFEKALEIDPKFHFAWHGLGNVLNALGRYSEAIAVYEKALEIDPKFHFAWNG 425

Query: 382 LGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 417
           LG+   +LG+  +A     KA +IDP+   A+  LG
Sbjct: 426 LGNALGELGRYSEAIAAYEKALEIDPKFHIAWNGLG 461



 Score = 73.2 bits (178), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 80/293 (27%), Positives = 128/293 (43%), Gaps = 10/293 (3%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
           A   + KA  ID      W G G  L   G   +A +AF+  LE D     A  G     
Sbjct: 201 AIAAFEKALEIDPKFHHAWNGLGAPLNDLGRNSEAIAAFEKALEIDPKEHIAWHGLGITL 260

Query: 173 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 232
              GR S+++  +++AL++ P    A   G+G+    LG+  +A  AF++AL++DP   +
Sbjct: 261 NALGRNSEAIAAFEKALEIDPKEHIAWH-GLGITLNALGRNSEAIAAFEKALEIDP---K 316

Query: 233 ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTE 292
           A +A   +    N      + +   ++A EI P    A N L       G++       E
Sbjct: 317 AHIAWKGLGNALNALGRNSEAIAAFKKALEIDPKFHHAWNGLGAPLNDLGRYSEAIAAFE 376

Query: 293 TALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQ 352
            AL +    P    +++ L    ++ G Y +A   Y  ++ EI+   +F F + GLG   
Sbjct: 377 KALEID---PKFHFAWHGLGNVLNALGRYSEAIAVYEKAL-EIDP--KFHFAWNGLGNAL 430

Query: 353 LKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKI 405
            +LG +  A+  +EK LEI P        LG     LG+  +A     KA +I
Sbjct: 431 GELGRYSEAIAAYEKALEIDPKFHIAWNGLGSARRGLGRNSEAIAAFDKALEI 483



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 74/276 (26%), Positives = 118/276 (42%), Gaps = 21/276 (7%)

Query: 204 GLCRYKLGQLGKARQAFQRALQLDPENVEALVALA--VMDLQANEAAGIRKGMEKMQRAF 261
           G+ RY  G L  A  AF++AL++DP+   A   L   + DL  N  A     +   ++A 
Sbjct: 189 GVERYYAGNLKGAIAAFEKALEIDPKFHHAWNGLGAPLNDLGRNSEA-----IAAFEKAL 243

Query: 262 EIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDY 321
           EI P   +A + L       G++       E AL +    P +  +++ L  + ++ G  
Sbjct: 244 EIDPKEHIAWHGLGITLNALGRNSEAIAAFEKALEID---PKEHIAWHGLGITLNALGRN 300

Query: 322 EKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKA 381
            +A   +  +++   K H     + GLG     LG    A+  F+K LEI P        
Sbjct: 301 SEAIAAFEKALEIDPKAH---IAWKGLGNALNALGRNSEAIAAFKKALEIDPKFHHAWNG 357

Query: 382 LGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKK 441
           LG     LG+  +A     KA +IDP+   A+  LG +L       AL  +  A  + +K
Sbjct: 358 LGAPLNDLGRYSEAIAAFEKALEIDPKFHFAWHGLGNVL------NALGRYSEAIAVYEK 411

Query: 442 AGEEVPI--EVLNNIGVIHFEKGEFESAHQSFKDAL 475
           A E  P      N +G    E G +  A  +++ AL
Sbjct: 412 ALEIDPKFHFAWNGLGNALGELGRYSEAIAAYEKAL 447


>gi|403359316|gb|EJY79316.1| TPR repeat-containing protein [Oxytricha trifallax]
          Length = 1076

 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 100/437 (22%), Positives = 192/437 (43%), Gaps = 37/437 (8%)

Query: 41   DLWLIIAREYFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIE 100
            D  + + R + K+G+V+Q            ID Y   ++ + ++ +NA    Y YLG I 
Sbjct: 651  DALVALGRVFEKKGEVDQ-----------AIDCYERAIK-QPVSNINA----YFYLGIIH 694

Query: 101  TKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRD 160
             K++E    +  + Q + +    D       +    L   +GE  +A+  FK  L+ D +
Sbjct: 695  EKKKE----YKRSIQLFKQCLLFDQEHFGACLHLATLQANQGESHKAAKYFKHALKLDPN 750

Query: 161  NVPALLGQACVEFNRGRYSDS-LEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQA 219
            N+PA  G   +  +     D+ + +Y+  +        A    +G+   + G+L KA + 
Sbjct: 751  NIPANFGLGKILHSTSENVDAPIPYYEFVINNDDKHYKAF-CQLGIVYLEKGELEKAAEY 809

Query: 220  FQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFF 279
             ++ LQL+P+ V  LV++  +     E    +   +  Q+A +  P    AL  L N  +
Sbjct: 810  LKKCLQLNPKYVLGLVSMGNLLF---ETGHSKTAAKYHQQALKYNPREIQALIGLGNALY 866

Query: 280  FTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK-EINKP 338
              G+     +  + AL + + G +  H  YNL  + +   + + A  +Y  ++    NKP
Sbjct: 867  DMGEPKEAIEYYKKALEL-DKGLSDVH--YNLGNALYLIENTDLAIQHYKIAIDLNPNKP 923

Query: 339  HEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQEL 398
                  YY LG       +F  A+ N+++ +E+ P N      LG+ Y  + + +KA   
Sbjct: 924  ES----YYNLGNALCIKAEFEKAIVNYKRTIELDPYNAPAFYNLGNAYYMINEFDKAISS 979

Query: 399  LRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIH 458
              +A K++P  A+   ++      +D G   +A K  +  L+   +    E   N+G I+
Sbjct: 980  YGQALKLNPDSAECHFNIASAY--NDKGDFDNAIKHYKDSLQYDAKNS--ETFVNLGTIY 1035

Query: 459  FEKGEFESAHQSFKDAL 475
              +  ++ +H++F  AL
Sbjct: 1036 ETQQAYKLSHEAFTQAL 1052



 Score = 79.7 bits (195), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 86/399 (21%), Positives = 172/399 (43%), Gaps = 51/399 (12%)

Query: 113  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
            A +Y  +A  ID + P   V  G++   KGEV+QA   ++  ++    N+ A      + 
Sbjct: 635  AEEYLKRAIAIDENLPDALVALGRVFEKKGEVDQAIDCYERAIKQPVSNINAYFYLGIIH 694

Query: 173  FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENV- 231
              +  Y  S++ +K+ L       GA  L +   +   G+  KA + F+ AL+LDP N+ 
Sbjct: 695  EKKKEYKRSIQLFKQCLLFDQEHFGAC-LHLATLQANQGESHKAAKYFKHALKLDPNNIP 753

Query: 232  ----------------------------------EALVALAVMDLQANEAAGIRKGMEKM 257
                                              +A   L ++ L+  E   + K  E +
Sbjct: 754  ANFGLGKILHSTSENVDAPIPYYEFVINNDDKHYKAFCQLGIVYLEKGE---LEKAAEYL 810

Query: 258  QRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHS 317
            ++  ++ P   + L  + N  F TG      +  + AL    + P +  +   L  + + 
Sbjct: 811  KKCLQLNPKYVLGLVSMGNLLFETGHSKTAAKYHQQALK---YNPREIQALIGLGNALYD 867

Query: 318  KGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCE 377
             G+ ++A  YY  ++ E++K    +  +Y LG     + +   A+ +++  +++ P+  E
Sbjct: 868  MGEPKEAIEYYKKAL-ELDKGLSDV--HYNLGNALYLIENTDLAIQHYKIAIDLNPNKPE 924

Query: 378  TLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGE-LLISSDTGAALDAFKTAR 436
            +   LG+      + EKA    ++  ++DP +A AF +LG    + ++   A+ ++  A 
Sbjct: 925  SYYNLGNALCIKAEFEKAIVNYKRTIELDPYNAPAFYNLGNAYYMINEFDKAISSYGQAL 984

Query: 437  TLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
             L   +      E   NI   + +KG+F++A + +KD+L
Sbjct: 985  KLNPDSA-----ECHFNIASAYNDKGDFDNAIKHYKDSL 1018



 Score = 69.7 bits (169), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 87/363 (23%), Positives = 162/363 (44%), Gaps = 37/363 (10%)

Query: 92  YYTYL--GKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVG--KGQLLLAKGEVEQA 147
           Y  YL  GK   KQR+    F  AT+ + KA  ++M++ S W     G + +  G+  + 
Sbjct: 547 YEIYLKQGKCYEKQRD----FDKATELFQKA--VEMNDQSPWAHFRLGWVCIRNGQKIKG 600

Query: 148 SSAFKIVLEADRDNVPAL--LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGL 205
               K  LE D +N   L  LG+  +   +   +++ E+ KRA+ +  + P A+ + +G 
Sbjct: 601 IEHLKKSLELDPNNCDVLTKLGEVLMR-EQNALNEAEEYLKRAIAIDENLPDAL-VALGR 658

Query: 206 CRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYP 265
              K G++ +A   ++RA++    N+ A   L +          I +  ++ +R+ +++ 
Sbjct: 659 VFEKKGEVDQAIDCYERAIKQPVSNINAYFYLGI----------IHEKKKEYKRSIQLFK 708

Query: 266 YCAM-------ALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSK 318
            C +       A  +LA      G+     +  + AL +    P    + + L +  HS 
Sbjct: 709 QCLLFDQEHFGACLHLATLQANQGESHKAAKYFKHALKLD---PNNIPANFGLGKILHST 765

Query: 319 GDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCET 378
            +   A + Y   V  IN   +    +  LG V L+ G+   A    +K L++ P     
Sbjct: 766 SENVDAPIPYYEFV--INNDDKHYKAFCQLGIVYLEKGELEKAAEYLKKCLQLNPKYVLG 823

Query: 379 LKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTART 437
           L ++G++  + G  + A +  ++A K +PR+ QA I LG  L    +   A++ +K A  
Sbjct: 824 LVSMGNLLFETGHSKTAAKYHQQALKYNPREIQALIGLGNALYDMGEPKEAIEYYKKALE 883

Query: 438 LLK 440
           L K
Sbjct: 884 LDK 886



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 85/361 (23%), Positives = 159/361 (44%), Gaps = 49/361 (13%)

Query: 136 QLLLAKGEVEQASSAFKIVLEADRDNVPALL----GQACVEFNRGR-YSDSLEFYKRALQ 190
           QL + + ++++A    K +   D +  PAL     G  C      + + D+L+ Y ++ Q
Sbjct: 482 QLEIEEKKLDEALGMLKQINAVDPNFFPALQQELHGDICFRREESKSFQDALDHYIKSAQ 541

Query: 191 VHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGI 250
           ++P     I L  G C  K     KA + FQ+A++++ ++  A   L  + ++  +    
Sbjct: 542 INPE-NYEIYLKQGKCYEKQRDFDKATELFQKAVEMNDQSPWAHFRLGWVCIRNGQKI-- 598

Query: 251 RKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFL--VEQLTETALAVTNHGPTKSHSY 308
            KG+E ++++ E+ P     L  L        Q+ L   E+  + A+A+  + P    + 
Sbjct: 599 -KGIEHLKKSLELDPNNCDVLTKLG-EVLMREQNALNEAEEYLKRAIAIDENLPD---AL 653

Query: 309 YNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKV 368
             L R +  KG+ ++A   Y  ++K+   P   I  Y+ LG +  K  +++ ++  F++ 
Sbjct: 654 VALGRVFEKKGEVDQAIDCYERAIKQ---PVSNINAYFYLGIIHEKKKEYKRSIQLFKQC 710

Query: 369 LEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAA 428
           L    ++      L  +    G+  KA +  + A K+DP +  A   LG++L S  T   
Sbjct: 711 LLFDQEHFGACLHLATLQANQGESHKAAKYFKHALKLDPNNIPANFGLGKILHS--TSEN 768

Query: 429 LDAFKTARTLLKKAGEEVPIE----VLNN----------IGVIHFEKGEFESAHQSFKDA 474
           +DA               PI     V+NN          +G+++ EKGE E A +  K  
Sbjct: 769 VDA---------------PIPYYEFVINNDDKHYKAFCQLGIVYLEKGELEKAAEYLKKC 813

Query: 475 L 475
           L
Sbjct: 814 L 814



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 135/609 (22%), Positives = 237/609 (38%), Gaps = 108/609 (17%)

Query: 221  QRALQLDPENVEALVALAVMDLQA---NEAAGIRKGMEKMQRAFEIYPYCAMALNYLANH 277
            QR LQ DP+N+ A + L  ++++    +EA G+ K                  +N +  +
Sbjct: 464  QRKLQQDPQNLFAQIRLCQLEIEEKKLDEALGMLK-----------------QINAVDPN 506

Query: 278  FFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINK 337
            FF              AL    HG           R   SK  ++ A  +Y+ S  +IN 
Sbjct: 507  FF-------------PALQQELHGDI-------CFRREESKS-FQDALDHYIKSA-QIN- 543

Query: 338  PHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQE 397
            P  +   Y   G+   K  DF  A   F+K +E+   +      LG + ++ GQ  K  E
Sbjct: 544  PENYEI-YLKQGKCYEKQRDFDKATELFQKAVEMNDQSPWAHFRLGWVCIRNGQKIKGIE 602

Query: 398  LLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKA---GEEVPIEVLNNI 454
             L+K+ ++DP +      LGE+L+        +A   A   LK+A    E +P + L  +
Sbjct: 603  HLKKSLELDPNNCDVLTKLGEVLMREQ-----NALNEAEEYLKRAIAIDENLP-DALVAL 656

Query: 455  GVIHFEKGEFESAHQSFKDALGDGI-------WLTLLDSKTKTYVIDASASMLQFKDMQL 507
            G +  +KGE + A   ++ A+   +       +L ++  K K Y      S+  FK   L
Sbjct: 657  GRVFEKKGEVDQAIDCYERAIKQPVSNINAYFYLGIIHEKKKEY----KRSIQLFKQCLL 712

Query: 508  FHRFE------------NDGNH----------VELPWNKVTVLFNLARLLEQIHDTVAAS 545
            F +              N G            ++L  N +   F L ++L    + V A 
Sbjct: 713  FDQEHFGACLHLATLQANQGESHKAAKYFKHALKLDPNNIPANFGLGKILHSTSENVDAP 772

Query: 546  VLYRLILFKYQD-YVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLEL 604
            + Y   +    D +  A+ +L  +   +  L+ + E + + L++N KY   L  +G+L L
Sbjct: 773  IPYYEFVINNDDKHYKAFCQLGIVYLEKGELEKAAEYLKKCLQLNPKYVLGLVSMGNL-L 831

Query: 605  KNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELY 664
                  K    +   +   + ++  A + LGN  Y      +   PK    + +KA EL 
Sbjct: 832  FETGHSKTAAKYHQQALKYNPREIQALIGLGNALY------DMGEPKEAIEYYKKALELD 885

Query: 665  TRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVY 724
              +     S+++   G  + L E      + DL  Q  + A   +    P+ + NL +  
Sbjct: 886  KGL-----SDVHYNLGNALYLIE------NTDLAIQHYKIAI-DLNPNKPESYYNLGNAL 933

Query: 725  FAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNY 784
              +  F  A+  Y+  +    YN  A     L   +Y   ++     S  +A+ L P + 
Sbjct: 934  CIKAEFEKAIVNYKRTIELDPYNAPA--FYNLGNAYYMINEFDKAISSYGQALKLNPDSA 991

Query: 785  TLRFDAGVA 793
               F+   A
Sbjct: 992  ECHFNIASA 1000



 Score = 40.4 bits (93), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 58/246 (23%), Positives = 103/246 (41%), Gaps = 40/246 (16%)

Query: 210 LGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAG---IRKGMEKMQRAFEIYPY 266
           L +L   +Q ++  L+LDPEN++ L +LA M +++    G       +   Q+A  I P 
Sbjct: 43  LIKLNFQQQLYEEILRLDPENIDGLNSLA-MCIKSTIPTGPQCFEIILPLYQKAISIDPE 101

Query: 267 CAMALNYLANHFFFTGQ-------HFLVEQLTE--TALAVTN------------------ 299
                N+    F++  +       HFL   + E   A A+ N                  
Sbjct: 102 -DFETNFNIGVFYYEQKKDYEKAIHFLKIAINEEKNATALFNLAVIYEEKGDKLKAKEAY 160

Query: 300 ---HGPTKSH--SYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLK 354
                  +SH  S  NLA     +G   +A  +Y  ++K+  K  +    ++ +G    +
Sbjct: 161 AECQKADQSHYKSKVNLAILLDKEGKGHEANQFYQEALKQNPKDAKI---HHNMGINLKR 217

Query: 355 LGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFI 414
            G    AL++++K +E+ PDN   L   G +Y        A ++L K+   +  +  AF+
Sbjct: 218 AGKLDEALSHYKKAMELDPDNSTVLYNTGILYNIKSDYHNAVDVLEKSISKNKENVYAFL 277

Query: 415 DLGELL 420
            LG+ L
Sbjct: 278 ALGDAL 283



 Score = 40.0 bits (92), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 24/100 (24%), Positives = 53/100 (53%), Gaps = 1/100 (1%)

Query: 141 KGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIR 200
           KG+  +A  A+    +AD+ +  + +  A +    G+  ++ +FY+ AL+ +P     I 
Sbjct: 150 KGDKLKAKEAYAECQKADQSHYKSKVNLAILLDKEGKGHEANQFYQEALKQNPK-DAKIH 208

Query: 201 LGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVM 240
             +G+   + G+L +A   +++A++LDP+N   L    ++
Sbjct: 209 HNMGINLKRAGKLDEALSHYKKAMELDPDNSTVLYNTGIL 248


>gi|26006103|dbj|BAC41395.1| mKIAA0155 protein [Mus musculus]
          Length = 386

 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 39/93 (41%), Positives = 63/93 (67%)

Query: 738 QNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKF 797
           +NCLRKFY + + +++LYLAR  ++  + Q+CK++LL+A H+APS+  L F+  + +Q+ 
Sbjct: 1   ENCLRKFYKHQNTEVVLYLARALFKCGKLQECKQTLLKARHVAPSDTVLMFNVALVLQRL 60

Query: 798 SASTLQKTRRTADEVRSTVAELENAVRVFSHLS 830
           + S L+  +    EV + V ELE A R FS+LS
Sbjct: 61  ATSVLKDEKSNLKEVLNAVKELELAHRYFSYLS 93


>gi|390949283|ref|YP_006413042.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
           [Thiocystis violascens DSM 198]
 gi|390425852|gb|AFL72917.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
           [Thiocystis violascens DSM 198]
          Length = 972

 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 87/360 (24%), Positives = 152/360 (42%), Gaps = 59/360 (16%)

Query: 84  AILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE 143
           A+LN+LG  +  LG+++            A  +Y +A RI          +G  LL+ G 
Sbjct: 190 AVLNSLGNAFKILGRLDD-----------ALDHYTRALRISPRFAEAHNNRGGTLLSLGH 238

Query: 144 VEQASSAFK--IVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 201
           +E+A ++ +  I L+AD       LGQ   E  +GR+ +++  Y++A  ++P   G ++ 
Sbjct: 239 LEEALTSLRDAIALKADFAEAHHNLGQVLAE--QGRFDEAVASYRQAGLLNPDLAG-LQH 295

Query: 202 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQAN---EAAGIRKGMEKMQ 258
            +GL  Y+LG+L +A  +   A + +P+         V+  Q N   E     +  +  +
Sbjct: 296 SLGLAFYRLGRLDEALASLSLAARSEPDQA------GVLSDQGNILRELGRFEEARDSYR 349

Query: 259 RAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSK 318
           RA  I P  A+A   L N     G    +++  E   A     P  +  Y N        
Sbjct: 350 RALAIDPANALAHTNLGNLLRELGH---LDEALEHHAAALRIAPDYAEGYCNAGLVLQDL 406

Query: 319 GDYEKAGLYYMASV-----------------KEINKPHE--------------FIFPYYG 347
           G  E+A  +Y  ++                 +E+ + HE              F   +  
Sbjct: 407 GRLEEARAHYSQALSINPNLAQAHGNLGNYWQELKRCHEALECYRRALAIEPRFAEAHNN 466

Query: 348 LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 407
           +G V L+ G+F  A   FE+ L I PD  +    LG  + ++G+ +KA +   +A +I P
Sbjct: 467 MGLVLLEQGNFDEARERFEQALSIRPDYVDAYLNLGTCHGRVGRYDKALDCFDRALRISP 526



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 99/407 (24%), Positives = 169/407 (41%), Gaps = 35/407 (8%)

Query: 83  IAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKG 142
           +AI    G  Y+YLG IE  +   +   I       +A   + H  + W+ + + LL   
Sbjct: 35  LAIDAGTGDAYSYLGLIEIARGRNDAAIINLRLALERAP--ERH--ANWLSQVETLLEPS 90

Query: 143 EVEQA-----------SSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQV 191
             E+A           S++  +   + R + PA        F RGR +++    +R    
Sbjct: 91  RHEEARLAMDRARSHDSNSAAVRPRSPRTSSPAERDALVALFGRGRLNEAQASARRLATR 150

Query: 192 HPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAG-I 250
           +P      ++ +G+   + GQ   A+   +RAL LDP++   L +L      A +  G +
Sbjct: 151 YPDDAFGWKV-LGIVLLECGQARDAQVQLERALDLDPKDAAVLNSLG----NAFKILGRL 205

Query: 251 RKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYN 310
              ++   RA  I P  A A N         G   L E LT    A+       + +++N
Sbjct: 206 DDALDHYTRALRISPRFAEAHNNRGGTLLSLGH--LEEALTSLRDAIALKA-DFAEAHHN 262

Query: 311 LARSYHSKGDYEKAGLYYMASVKEIN--KPHEFIFPYYGLGQVQLKLGDFRSALTNFEKV 368
           L +    +G +++A    +AS ++     P +     + LG    +LG    AL +    
Sbjct: 263 LGQVLAEQGRFDEA----VASYRQAGLLNP-DLAGLQHSLGLAFYRLGRLDEALASLSLA 317

Query: 369 LEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAA 428
               PD    L   G+I  +LG+ E+A++  R+A  IDP +A A  +LG LL   + G  
Sbjct: 318 ARSEPDQAGVLSDQGNILRELGRFEEARDSYRRALAIDPANALAHTNLGNLL--RELGHL 375

Query: 429 LDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
            +A +     L+ A +    E   N G++  + G  E A   +  AL
Sbjct: 376 DEALEHHAAALRIAPDYA--EGYCNAGLVLQDLGRLEEARAHYSQAL 420


>gi|422338995|ref|ZP_16419955.1| tetratricopeptide repeat family protein [Fusobacterium nucleatum
           subsp. polymorphum F0401]
 gi|355372122|gb|EHG19465.1| tetratricopeptide repeat family protein [Fusobacterium nucleatum
           subsp. polymorphum F0401]
          Length = 652

 Score = 80.1 bits (196), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 88/383 (22%), Positives = 165/383 (43%), Gaps = 48/383 (12%)

Query: 113 ATQYYNKASRIDMHEPSTWV-GKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACV 171
           A Q Y+KA  +D +  S +   +G    + G+ E+A   +   ++ + ++  +   +   
Sbjct: 28  AIQNYDKAIELDSNVNSVYYYNRGNAYFSLGKFEEAIQDYNKAIDLNPNDDLSYSNRGNA 87

Query: 172 EFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENV 231
            F+ G++ D+++ Y +A+ ++P+         G     L +   A Q + + + L+P + 
Sbjct: 88  YFSLGKFEDAIQDYNKAIDLNPNNASYYN-NRGTTFTNLEKYEDAIQDYNKTIDLNPNDN 146

Query: 232 EALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLT 291
            A           NE     K +    +A ++ P    A       +F  G  F      
Sbjct: 147 YAYFNRGAAFTYLNE---YEKAINDFNKAIDLNPNDDSA-------YFNRGTAFTNLSNY 196

Query: 292 ETALAVTNHG---PTKSHSYYNLARS-YHSKGDYEKAGLYYMASVKEINKPHE----FIF 343
           E A+   N      + + SYYN   + Y ++G+Y++A       VK+ +K  E    F+F
Sbjct: 197 EKAINDFNKAIDLNSNNASYYNYRGTLYINQGNYDEA-------VKDFSKAIELNPIFVF 249

Query: 344 PYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAA 403
            Y  LG +   L D+  A+ N  K +++ P+  +     G  YV   + ++A +   KA 
Sbjct: 250 GYSNLGSLYNNLNDYEKAIENLNKAIDLDPNFSDAYNIRGITYVNQEKFDEAVKDFSKAI 309

Query: 404 KIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP--------IEVL---- 451
           +++P D + + +LG L I       L+ ++ A   L KA +  P        IE++    
Sbjct: 310 ELNPNDKEYYYNLGILYID------LNNYEKAIETLNKAIDLDPNFSDARNVIEIISTTQ 363

Query: 452 NNIGVIHFEKGEFESAHQSFKDA 474
           NN  VI F K     + QS K++
Sbjct: 364 NNKKVIKFGKN---GSKQSIKES 383


>gi|238503452|ref|XP_002382959.1| RNA polymerase II transcription elongation factor (Ctr9), putative
           [Aspergillus flavus NRRL3357]
 gi|220690430|gb|EED46779.1| RNA polymerase II transcription elongation factor (Ctr9), putative
           [Aspergillus flavus NRRL3357]
          Length = 1032

 Score = 79.7 bits (195), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 149/653 (22%), Positives = 258/653 (39%), Gaps = 60/653 (9%)

Query: 258 QRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHS 317
           Q+AF++     M       +F     +  VE L   A+  T+     S  ++ L R  H 
Sbjct: 159 QKAFKLDKEYPMTGALFGGYFLLRKSYSTVETLARRAIEHTDVMQIASDGWFLLGRKAHY 218

Query: 318 KGDYEKAGLYYMASVKEINKPHEFIFP-YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNC 376
           +GD  +A  +Y  S +      +   P  +G  Q+Q+   D+  A    EK+++    N 
Sbjct: 219 EGDLTRAAEFYNRSDQARGGGDKGYLPARFGTVQMQVSNKDYDGAKFRLEKIIQ-QTKNP 277

Query: 377 ETLKALGHIYVQ-------LGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAAL 429
           E +  LG +Y +       +G  E      +KA  +       + D G+ L   ++    
Sbjct: 278 ECMILLGALYAEEVFTSERIGSKEDKSAEAKKAISLLESVRALWKDEGKKLSPEESVLVY 337

Query: 430 DAFKTARTLLKKAGEEVP-IEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKT 488
            A    RT  +K+ + +  +E L    ++  E  E     +  K AL   +   LL +  
Sbjct: 338 LARLYERTAPEKSMQCLSQLEELQLAAIVEDEHREGLENEEQLKAALRVNLPPQLLSNMG 397

Query: 489 ----KTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAA 544
               +   +D + +M +          E +  H +      T+ +NL R  E       A
Sbjct: 398 CFLYQAEKVDQARTMFEMALNACVRSQEKESEH-DTDALVTTISYNLGRTYEASDMPEEA 456

Query: 545 SVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLEL 604
             +Y  +L ++ DY +A  RL  IA       L     +E  K   K   A S   +LE+
Sbjct: 457 KKVYEGLLERHGDYTEASARLTYIA-------LRQSPTDEGPKRMAKLYEADST--NLEV 507

Query: 605 KND-DWVKAKETFRAASDATDGK--------------DSYATLSLGNWNYFAA--LRNEK 647
           +    W  +K   R A+ A D +              D Y+   +GN +   A  +R E 
Sbjct: 508 RALFGWYLSKSKKRVANLAEDQEQRHYKHTLQYFDKHDRYSLTGMGNVHLMTARDMRREN 567

Query: 648 RAPKLEATHL-EKAKELYTRVIVQHTSNLYAANGAGVVLAE-KGQFDVSKDLFTQVQEAA 705
              K +   + E+A E + + +     N YAA G  + L + K  +  +  +F+++++  
Sbjct: 568 DQEKEKRRKMYERAVEFFDKALQLDPQNAYAAQGIAIALVDAKKDYSTAVHIFSKIRDTL 627

Query: 706 SGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLART---HYE 762
             S       V++NL HVY     +  +++ Y+  L K     DAQIL  L R      +
Sbjct: 628 RDS------SVYLNLGHVYAELRQYTRSIEHYEAALSKDRAR-DAQILACLGRVWLLKGK 680

Query: 763 AEQWQDCKKSLL----RAIHLAPSNYTLRFDAGVAMQKFSA--STLQKTRRTADEVRSTV 816
            E      K+ L    RA  +APS   L F+      + ++   +L +T++T  +V+   
Sbjct: 681 QEMSLSAMKTALDYARRAHSVAPSQVHLEFNVAFVQNQIASLVYSLPETQKTVQDVQDAS 740

Query: 817 AELENAVRVFSHLSAASN-LHLHGFDEKKINTHVEYCKHLLDAAKIHREAAER 868
             L  AV  F  ++   N  +  G  E++ N      K L  A +  RE  E+
Sbjct: 741 DGLREAVESFGRIAQTKNPPYPAGALEQRANMGKTIIKQLERALQSQREYEEK 793



 Score = 47.4 bits (111), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 22/65 (33%), Positives = 39/65 (60%)

Query: 2  ACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQ 61
          + + IP    + EV V+L+ LP D +++  +L+ E+A  + W+IIA  Y KQ +++    
Sbjct: 33 SAIDIPASTLDSEVEVSLEGLPDDPTELCTLLENEKAAKNFWVIIALAYAKQKQIDHAID 92

Query: 62 ILEEG 66
          IL +G
Sbjct: 93 ILNKG 97


>gi|225621426|ref|YP_002722685.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
 gi|225216247|gb|ACN84981.1| putative TPR domain-containing protein [Brachyspira hyodysenteriae
           WA1]
          Length = 817

 Score = 79.7 bits (195), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 137/680 (20%), Positives = 254/680 (37%), Gaps = 119/680 (17%)

Query: 129 STWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRA 188
           + +  +G   L  G  E+A   FK VL+ + ++  + +          +Y +++  Y   
Sbjct: 74  TVYYDRGLAKLYLGNYEEAIEDFKRVLKINNNDTDSRVNIGLCYLYMKKYKEAINIYDEV 133

Query: 189 LQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAA 248
           +   P    +     GLC++ L Q  +A   F + ++LD  +  +          A    
Sbjct: 134 IANFPDNISSYN-NRGLCKFYLSQFEEAINDFNKVIELDKNDTSS---------SAYNTI 183

Query: 249 GIRK-GMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHS 307
           G+ K  + +   A + Y                           E A+ +    P    +
Sbjct: 184 GLCKYNLNEFDEALKCY---------------------------EKAIEI---NPNLISA 213

Query: 308 YYNLARSYHSKG-DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFE 366
           Y N+A   HS G DYE   L Y+    EI+ P+  I  Y  +  ++L+LG    A     
Sbjct: 214 YNNIALIKHSVGLDYE--ALSYLNKALEID-PNN-IETYLKIYSIKLELGLENEANEYLN 269

Query: 367 KVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL------ 420
           K++E++PD+      +G+I +  G +E++ E L+KA +I+P    A+ D+   L      
Sbjct: 270 KIIEMHPDDIYVYDRIGNIKIDAGYMEESLEYLKKALEINPNFIDAYYDIAFALHKLDLN 329

Query: 421 ---------------ISSDT-------GAALDAFKTARTLLKKAGE--EVPIEVLNNIGV 456
                           S+DT         AL  ++ A + L K  E     + + N I +
Sbjct: 330 NEALEYLEKALQIYPNSADTYFKMFLVKRALRDYEGALSCLNKILEIDNTDVSIYNEIAL 389

Query: 457 IHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGN 516
           I  E   ++ A      A         LD  T    I  S  ++            N   
Sbjct: 390 IKIELELYDEALYYLNKA---------LDIDTNNAEIYNSIGLVYHYKKNYEEAIRNFNK 440

Query: 517 HVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQ 576
            +EL  +  +  +N+     ++HD   +   Y   L     Y  AY+ L  I     N +
Sbjct: 441 AIELNTSMASAYYNIGLAYYEMHDYENSIQYYNKALEINPQYASAYINLGLIKHNLGNYK 500

Query: 577 LSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASD-ATDGKDSYATLSLG 635
            +I+   +AL++N  Y  A   +   E+  +D+  + E F  A +   D  + Y  + L 
Sbjct: 501 EAIDYYKKALEINPDYSLAYYNIALAEMSLEDYKNSLEDFNKALELGYDEAEIYINIGL- 559

Query: 636 NWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSK 695
                            +A + +KA E Y +V+  + + + A       L+   +++ + 
Sbjct: 560 -------------IYSRQAVY-DKAIEYYNKVLEINPNKVNAYYNIAFSLSNMDKYEEAL 605

Query: 696 DLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLY 755
           +++ +V     G+              VY+ +G        Y+  +R F       I++ 
Sbjct: 606 EIYDKVIRMYPGNF------------DVYYERGYTKYRASKYEEAVRDF------DIIIN 647

Query: 756 LARTHYEAEQWQDCKKSLLR 775
           +   HY A  ++ C K  L+
Sbjct: 648 VNSKHYNAYYYRGCSKKYLK 667



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 85/391 (21%), Positives = 165/391 (42%), Gaps = 44/391 (11%)

Query: 113 ATQYYNKASRIDMHEPSTWVGK--GQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQAC 170
           A +Y NK   I+MH    +V    G + +  G +E++    K  LE + + + A    A 
Sbjct: 264 ANEYLNKI--IEMHPDDIYVYDRIGNIKIDAGYMEESLEYLKKALEINPNFIDAYYDIAF 321

Query: 171 VEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPEN 230
                   +++LE+ ++ALQ++P+        + L +  L     A     + L++D  +
Sbjct: 322 ALHKLDLNNEALEYLEKALQIYPNSADT-YFKMFLVKRALRDYEGALSCLNKILEIDNTD 380

Query: 231 VEAL--VALAVMDLQANEAA--GIRKGMEKMQRAFEIYPYCAMALNY------------- 273
           V     +AL  ++L+  + A   + K ++      EIY    +  +Y             
Sbjct: 381 VSIYNEIALIKIELELYDEALYYLNKALDIDTNNAEIYNSIGLVYHYKKNYEEAIRNFNK 440

Query: 274 -------LANHFFFTGQHFLVEQLTETALAVTNH----GPTKSHSYYNLARSYHSKGDYE 322
                  +A+ ++  G  +      E ++   N      P  + +Y NL    H+ G+Y+
Sbjct: 441 AIELNTSMASAYYNIGLAYYEMHDYENSIQYYNKALEINPQYASAYINLGLIKHNLGNYK 500

Query: 323 KAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKAL 382
           +A  YY  ++ EIN   ++   YY +   ++ L D++++L +F K LE+  D  E    +
Sbjct: 501 EAIDYYKKAL-EINP--DYSLAYYNIALAEMSLEDYKNSLEDFNKALELGYDEAEIYINI 557

Query: 383 GHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKA 442
           G IY +    +KA E   K  +I+P    A+ ++   L      + +D ++ A  +  K 
Sbjct: 558 GLIYSRQAVYDKAIEYYNKVLEINPNKVNAYYNIAFSL------SNMDKYEEALEIYDKV 611

Query: 443 GEEVP--IEVLNNIGVIHFEKGEFESAHQSF 471
               P   +V    G   +   ++E A + F
Sbjct: 612 IRMYPGNFDVYYERGYTKYRASKYEEAVRDF 642



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 61/266 (22%), Positives = 117/266 (43%), Gaps = 24/266 (9%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
           A  Y NKA  ID +    +   G +   K   E+A   F   +E +     A        
Sbjct: 400 ALYYLNKALDIDTNNAEIYNSIGLVYHYKKNYEEAIRNFNKAIELNTSMASAYYNIGLAY 459

Query: 173 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 232
           +    Y +S+++Y +AL+++P    A  + +GL ++ LG   +A   +++AL+++P+   
Sbjct: 460 YEMHDYENSIQYYNKALEINPQYASA-YINLGLIKHNLGNYKEAIDYYKKALEINPDYSL 518

Query: 233 AL--VALAVMDLQANEAAGIRKGMEKMQRAFEI-YPYCAMALNYLANHFFFTGQHFLVEQ 289
           A   +ALA M L+       +  +E   +A E+ Y    + +N         G  +  + 
Sbjct: 519 AYYNIALAEMSLE-----DYKNSLEDFNKALELGYDEAEIYIN--------IGLIYSRQA 565

Query: 290 LTETALAVTNH----GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 345
           + + A+   N      P K ++YYN+A S  +   YE+A   Y   ++    P  F   Y
Sbjct: 566 VYDKAIEYYNKVLEINPNKVNAYYNIAFSLSNMDKYEEALEIYDKVIRMY--PGNFDV-Y 622

Query: 346 YGLGQVQLKLGDFRSALTNFEKVLEI 371
           Y  G  + +   +  A+ +F+ ++ +
Sbjct: 623 YERGYTKYRASKYEEAVRDFDIIINV 648



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 71/338 (21%), Positives = 134/338 (39%), Gaps = 21/338 (6%)

Query: 77  DVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQ 136
           D+      I N++G+ Y Y       ++  EE    A + +NKA  ++    S +   G 
Sbjct: 409 DIDTNNAEIYNSIGLVYHY-------KKNYEE----AIRNFNKAIELNTSMASAYYNIGL 457

Query: 137 LLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCP 196
                 + E +   +   LE +     A +    ++ N G Y +++++YK+AL+++P   
Sbjct: 458 AYYEMHDYENSIQYYNKALEINPQYASAYINLGLIKHNLGNYKEAIDYYKKALEINPDYS 517

Query: 197 GAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEK 256
            A    I L    L     + + F +AL+L  +  E  + + ++    +  A   K +E 
Sbjct: 518 LA-YYNIALAEMSLEDYKNSLEDFNKALELGYDEAEIYINIGLI---YSRQAVYDKAIEY 573

Query: 257 MQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYH 316
             +  EI P     +N   N  F        E+  E    V    P     YY    + +
Sbjct: 574 YNKVLEINP---NKVNAYYNIAFSLSNMDKYEEALEIYDKVIRMYPGNFDVYYERGYTKY 630

Query: 317 SKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNC 376
               YE+A +     +  +N  H   + Y G  +  LK  ++  A+ +F+K +E   +N 
Sbjct: 631 RASKYEEA-VRDFDIIINVNSKHYNAYYYRGCSKKYLK--NYDGAIKDFDKAIEYNANNS 687

Query: 377 ETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFI 414
           +        Y  L +  ++ E   KA ++   D   +I
Sbjct: 688 DFYSERASCYDYLNKYRESVENYDKAIELKDDDWFLYI 725



 Score = 49.3 bits (116), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 77/349 (22%), Positives = 143/349 (40%), Gaps = 56/349 (16%)

Query: 100 ETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADR 159
           E K+ EK   +I    +YN  S    H  +  + K  L L     E+A   F+  +E   
Sbjct: 17  ENKEYEKSIEYIDKVIFYNGDSYDLYH--NRGLSKLNLRL----YEEAIKDFERAIELGD 70

Query: 160 DNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQA 219
           D+      +   +   G Y +++E +KR L+++ +   + R+ IGLC   + +  +A   
Sbjct: 71  DSETVYYDRGLAKLYLGNYEEAIEDFKRVLKINNNDTDS-RVNIGLCYLYMKKYKEAINI 129

Query: 220 FQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFF 279
           +   +   P+N+               ++   +G+ K                      F
Sbjct: 130 YDEVIANFPDNI---------------SSYNNRGLCK----------------------F 152

Query: 280 FTGQHFLVEQLTETALAVT-NHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKP 338
           +  Q    E + +    +  +   T S +Y  +    ++  ++++A   Y  ++ EIN P
Sbjct: 153 YLSQ--FEEAINDFNKVIELDKNDTSSSAYNTIGLCKYNLNEFDEALKCYEKAI-EIN-P 208

Query: 339 HEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQEL 398
           +  I  Y  +  ++  +G    AL+   K LEI P+N ET   +  I ++LG   +A E 
Sbjct: 209 N-LISAYNNIALIKHSVGLDYEALSYLNKALEIDPNNIETYLKIYSIKLELGLENEANEY 267

Query: 399 LRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP 447
           L K  ++ P D   +  +G + I  D G   ++ +     LKKA E  P
Sbjct: 268 LNKIIEMHPDDIYVYDRIGNIKI--DAGYMEESLE----YLKKALEINP 310


>gi|147919209|ref|YP_687056.1| hypothetical protein RCIX2685 [Methanocella arvoryzae MRE50]
 gi|110622452|emb|CAJ37730.1| hypothetical protein RCIX2685 [Methanocella arvoryzae MRE50]
          Length = 365

 Score = 79.7 bits (195), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 82/336 (24%), Positives = 143/336 (42%), Gaps = 46/336 (13%)

Query: 117 YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 176
           YNK    D + P   V  G +    G+ + A + F   L+   D   A  G ACV+   G
Sbjct: 5   YNKKEIEDRNSPEGLVASGNVYAMSGQYDNALAHFHKALKLKPDCTDAYYGLACVQCATG 64

Query: 177 RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVA 236
              ++ + +K AL++    PGA    +G   Y LG+L +A    QR+L++DP+   A   
Sbjct: 65  NLEEAEKSFKDALRIDDKHPGA-HSDLGNLYYCLGRLDEALAELQRSLEIDPQQHLAHYR 123

Query: 237 LAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALA 296
           L ++ L+ +      + +E++++   + P  A A   L   +   G+        + A+A
Sbjct: 124 LGLVYLRMDRD---DEAIEELKKTISLKPSYADAYTALGRTYGLQGR-------LDEAIA 173

Query: 297 VTNHG----PTKSHSYYNLARSYHSKGDYEKAGLYYMASVK---EINKPH---------- 339
              H     P  +  +++L  +   KGD + A   +  +++   E   PH          
Sbjct: 174 AFRHAIAEKPQDAVCHFDLGLALSMKGDLDPANTEFAEAIRLDPEFPDPHMAMGSNLFTD 233

Query: 340 --------EF-----IFPY-----YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKA 381
                   EF     + PY       L QV  + G    A+  + + L + P   E   +
Sbjct: 234 GKLNEAAFEFREAIRLNPYLEEAHLKLAQVYEQKGLMGEAVKEYREALAVQPGMYEANLS 293

Query: 382 LGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 417
           LG +++ LG+ E+A   L  AA+  P  A A+++LG
Sbjct: 294 LGRVHMTLGRYEEAIRELASAAEARPESAIAYLELG 329



 Score = 43.9 bits (102), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 60/213 (28%), Positives = 94/213 (44%), Gaps = 20/213 (9%)

Query: 175 RGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEAL 234
           +GR  +++  ++ A+   P         +GL     G L  A   F  A++LDPE  +  
Sbjct: 165 QGRLDEAIAAFRHAIAEKPQ-DAVCHFDLGLALSMKGDLDPANTEFAEAIRLDPEFPDPH 223

Query: 235 VALA---VMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLT 291
           +A+      D + NEAA       + + A  + PY   A   LA  +   G   + E + 
Sbjct: 224 MAMGSNLFTDGKLNEAAF------EFREAIRLNPYLEEAHLKLAQVYEQKG--LMGEAVK 275

Query: 292 E--TALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLG 349
           E   ALAV    P    +  +L R + + G YE+A +  +AS  E  +P E    Y  LG
Sbjct: 276 EYREALAVQ---PGMYEANLSLGRVHMTLGRYEEA-IRELASAAEA-RP-ESAIAYLELG 329

Query: 350 QVQLKLGDFRSALTNFEKVLEIYPDNCETLKAL 382
               KLG  + A  N+EK L++ P     +KA+
Sbjct: 330 NAFSKLGFEKEAKQNYEKALKLDPSLESAIKAV 362



 Score = 41.6 bits (96), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 25/93 (26%), Positives = 43/93 (46%), Gaps = 4/93 (4%)

Query: 327 YYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIY 386
           Y    +++ N P   +      G V    G + +AL +F K L++ PD  +    L  + 
Sbjct: 5   YNKKEIEDRNSPEGLV----ASGNVYAMSGQYDNALAHFHKALKLKPDCTDAYYGLACVQ 60

Query: 387 VQLGQIEKAQELLRKAAKIDPRDAQAFIDLGEL 419
              G +E+A++  + A +ID +   A  DLG L
Sbjct: 61  CATGNLEEAEKSFKDALRIDDKHPGAHSDLGNL 93



 Score = 41.2 bits (95), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 32/110 (29%), Positives = 55/110 (50%), Gaps = 3/110 (2%)

Query: 315 YHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPD 374
           Y   G Y+ A  ++  ++K   KP +    YYGL  VQ   G+   A  +F+  L I   
Sbjct: 26  YAMSGQYDNALAHFHKALK--LKP-DCTDAYYGLACVQCATGNLEEAEKSFKDALRIDDK 82

Query: 375 NCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSD 424
           +      LG++Y  LG++++A   L+++ +IDP+   A   LG + +  D
Sbjct: 83  HPGAHSDLGNLYYCLGRLDEALAELQRSLEIDPQQHLAHYRLGLVYLRMD 132


>gi|219684521|ref|ZP_03539464.1| TPR domain protein [Borrelia garinii PBr]
 gi|219685809|ref|ZP_03540618.1| TPR domain protein [Borrelia garinii Far04]
 gi|219671883|gb|EED28937.1| TPR domain protein [Borrelia garinii PBr]
 gi|219672642|gb|EED29672.1| TPR domain protein [Borrelia garinii Far04]
          Length = 379

 Score = 79.7 bits (195), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 75/318 (23%), Positives = 135/318 (42%), Gaps = 14/318 (4%)

Query: 123 IDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSL 182
           +D+ E S    +G  L+ +  + +A S F  +LE D +N  AL+G   +E  +  Y  ++
Sbjct: 22  LDVTEKSK---RGYQLIKEERLSEAESLFSDILEKDNENNYALVGLGDIERKKNNYDKAI 78

Query: 183 EFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDL 242
            +Y+R L  HP+   A+  G+G C   L    KA   ++  L+ DPEN+  L  +A    
Sbjct: 79  VYYQRCLVKHPNNNYAL-FGLGDCYRNLDDYKKATDIWEEYLKYDPENITVLTRVAA--- 134

Query: 243 QANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGP 302
              +    +K  +   +  E+ P    AL  +  H ++  + +         +   N   
Sbjct: 135 SYRKLKNFQKSKQTYLKVMELMPENDYALVGIG-HLYYDFKEYKEALKYWLKMYELNQSK 193

Query: 303 TKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSAL 362
                  ++   Y    ++ + G+Y+     EI+ P  F +  +GL        D++ AL
Sbjct: 194 VDVRVLTSIGNCYRKLREFTR-GIYFFKKALEIS-PSNF-YAVFGLADCYRGNKDYKEAL 250

Query: 363 TNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS 422
             +  ++E  P N   L  +G  Y  L   E +Q   +KA  +   D   F  LG  L+ 
Sbjct: 251 KYWLDIVEKDPKNNLVLTRVGDAYRYLNDYENSQIYYKKALDV---DFDMFAILGLALLQ 307

Query: 423 SDTGAALDAFKTARTLLK 440
            + G   +A    ++L+K
Sbjct: 308 KEQGRYEEALIAIKSLIK 325


>gi|111115017|ref|YP_709635.1| hypothetical protein BAPKO_0197 [Borrelia afzelii PKo]
 gi|384206693|ref|YP_005592414.1| hypothetical protein BafPKo_0191 [Borrelia afzelii PKo]
 gi|110890291|gb|ABH01459.1| conserved hypothetical protein [Borrelia afzelii PKo]
 gi|342856576|gb|AEL69424.1| tetratricopeptide repeat family protein [Borrelia afzelii PKo]
          Length = 379

 Score = 79.7 bits (195), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 76/318 (23%), Positives = 135/318 (42%), Gaps = 14/318 (4%)

Query: 123 IDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSL 182
           +D+ E S    +G  L+ +  + +A S F  +LE D +N  AL+G   +E  +  Y  ++
Sbjct: 22  LDVTEKSK---RGYQLIKEERLSEAESLFSNILEKDNENNYALVGLGDIERKKNNYDKAI 78

Query: 183 EFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDL 242
            +Y+R L  HP+   A+  G+G C   L    KA   ++  L+ DPEN+  L  +A    
Sbjct: 79  VYYQRCLIKHPNNNYAL-FGLGDCYRNLDNYKKATDIWEEYLKYDPENITVLTRVAS--- 134

Query: 243 QANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGP 302
              +    +K  +   +  E+ P    AL  +  H ++  + +         +   N   
Sbjct: 135 SYRKLKNFQKSKQTYLKVMELMPENDYALVGIG-HLYYDFKEYKEALKYWLKMYELNQSK 193

Query: 303 TKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSAL 362
                  ++   Y    ++ + G+Y+     EI+ P  F +  +GL        +++ AL
Sbjct: 194 VDVRVLTSIGNCYRKLREFTR-GIYFFKKALEIS-PSNF-YAIFGLADCYRGNKEYKEAL 250

Query: 363 TNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS 422
             +  ++E  P N   L  +G  Y  L   E AQ   +KA  +   D   F  LG  LI 
Sbjct: 251 KYWLDIIEKDPKNNLVLTRVGDAYRYLNDYENAQIYYKKALDV---DFDMFAILGLALIQ 307

Query: 423 SDTGAALDAFKTARTLLK 440
            + G   +A    ++L+K
Sbjct: 308 KEQGKYEEALIAIKSLIK 325


>gi|189426262|ref|YP_001953439.1| hypothetical protein Glov_3213 [Geobacter lovleyi SZ]
 gi|189422521|gb|ACD96919.1| Tetratricopeptide TPR_2 repeat protein [Geobacter lovleyi SZ]
          Length = 639

 Score = 79.7 bits (195), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 90/311 (28%), Positives = 136/311 (43%), Gaps = 52/311 (16%)

Query: 135 GQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS 194
           G  L AKGEV++A+ A++ VL+   D +  L     + F  GR  D+L  Y+ A  +  S
Sbjct: 280 GDQLAAKGEVDKAAEAYRAVLKQQPDAIEPLEKLGALYFRAGRDGDALLAYRDATHLGSS 339

Query: 195 CPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGM 254
            P  +   +GL   K  QL +A  A++RA++  P   EA + L          A IR G 
Sbjct: 340 NP-EVYYNLGLLYEKRNQLDEAVVAYKRAIEKRPAYAEARLKL----------ADIRLGR 388

Query: 255 EKMQRAFEIY-------PYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHS 307
              Q A E Y       P  A     LA  F       L E   E+  AV    P    +
Sbjct: 389 GNTQEAVEQYVEFLKLKPESADIHLKLARIFVKNKNLNLAE---ESYKAVLKLAPDNPEA 445

Query: 308 YYNLARSYHSKGDYEKAGLYYMASV---KEINKPHEFIFPYYGLGQ------------VQ 352
              LA  Y +KG  +KA  +Y  ++   +E N+    +   Y   +            V+
Sbjct: 446 NRELAAVYRAKGATDKAVEHYTKALELQEEDNESRNALVAIYVKDKKYDELAELLQEAVE 505

Query: 353 L---------KLG---DFR----SALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQ 396
           L         KLG   DF+    +A+ +++K  E+ PD+   L ALG +Y++ G++ +A+
Sbjct: 506 LAPDDANNHYKLGLIYDFKKEYDNAIASYKKAAELKPDHARALHALGRVYMKTGRLSEAR 565

Query: 397 ELLRKAAKIDP 407
           E L  A K DP
Sbjct: 566 EALEAARKADP 576



 Score = 49.3 bits (116), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 112/458 (24%), Positives = 180/458 (39%), Gaps = 84/458 (18%)

Query: 178 YSDSLEFYKRALQVHPSCP--GAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV 235
           YSD     K   Q+  SCP   A +   GL   + G +  A   ++RALQ +P    A  
Sbjct: 44  YSDDAARTKDEAQILSSCPDGAAAQFVQGLQAERSGNIDGAIAGYRRALQKEPGLAVASG 103

Query: 236 ALAVM----DLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLT 291
            L ++     LQ + A  + KG+     A +  P    AL  +      T + F      
Sbjct: 104 NLGLLYLQKGLQDDAAVALTKGI-----AGQPLPAYHKALGKI-----MTDRKFY----- 148

Query: 292 ETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQV 351
             ALA+ ++G   +    + A                +A   E+         Y   GQ 
Sbjct: 149 --ALALYHYGEASAKLPADAA---------------VLAGQAEV---------YAAQGQT 182

Query: 352 QLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQ 411
              + +FR AL        + P + +   AL  IY+Q  Q E A  LL+KA+  +PR + 
Sbjct: 183 DRAVDEFRRALL-------LDPSHEQASLALAGIYLQQNQQEAALNLLKKASTANPRSSS 235

Query: 412 AFIDLGELLISSDTGAALDAFKTARTLLKK---AGEEVPIEVLNNI-GVIHFEKGEFESA 467
             + L +  I    G A  A +  R L  K     EE+P      + G     KGE + A
Sbjct: 236 LHLMLAD--IYEKNGDAKQA-EYERLLGGKKVVVTEELPARAEGVVLGDQLAAKGEVDKA 292

Query: 468 HQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHV-------EL 520
            ++++  L           K +   I+    +       L+ R   DG+ +        L
Sbjct: 293 AEAYRAVL-----------KQQPDAIEPLEKL-----GALYFRAGRDGDALLAYRDATHL 336

Query: 521 PWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIE 580
             +   V +NL  L E+ +    A V Y+  + K   Y +A L+LA I   R N Q ++E
Sbjct: 337 GSSNPEVYYNLGLLYEKRNQLDEAVVAYKRAIEKRPAYAEARLKLADIRLGRGNTQEAVE 396

Query: 581 LVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRA 618
              E LK+  +  +    L  + +KN +   A+E+++A
Sbjct: 397 QYVEFLKLKPESADIHLKLARIFVKNKNLNLAEESYKA 434


>gi|113476015|ref|YP_722076.1| hypothetical protein Tery_2383 [Trichodesmium erythraeum IMS101]
 gi|110167063|gb|ABG51603.1| TPR repeat [Trichodesmium erythraeum IMS101]
          Length = 1421

 Score = 79.7 bits (195), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 117/574 (20%), Positives = 225/574 (39%), Gaps = 92/574 (16%)

Query: 53   QGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFIL 112
            +G +E F++ LE             +  + +   N LG  Y  LG+           F  
Sbjct: 911  KGAIENFKKALE-------------LEPKDLQTYNNLGAAYVELGE-----------FNE 946

Query: 113  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
            A + +++A ++D  +   +   G +    G+ + A + +   ++ + +   A   +    
Sbjct: 947  AIELFSQALKVDSQDSQIYQNLGVVRFKAGDKQGAIADYNQAIKLNPNKPEAYYNRGIAY 1006

Query: 173  FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 232
               G   D++  + + LQ+HP    A     G+ R+++  +  A   F  A++L+P++ E
Sbjct: 1007 RFLGHNQDAMNDFTKVLQLHPRVVDAYTQR-GIVRFEVKDIEGAIADFNDAIKLNPKHPE 1065

Query: 233  ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTE 292
            A+   A++     +  G    ++ + +  +++P    A    +   F  G H    +  +
Sbjct: 1066 AIYNRAIIRRLTKDNQG---SLDDLNKVIQLHPKYIDAYIKRSIVRFDLGDHEGALKDLD 1122

Query: 293  TALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQ 352
            +A+ +    P  + +YY  A +  S GD   A   +  +++   K H+    Y  +G V+
Sbjct: 1123 SAVQLQ---PNNAEAYYQRANTKRSMGDILSAIADFENAIRLNPKYHQ---AYNDMGIVR 1176

Query: 353  LKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQA 412
            L+ GD   A+ NFE  ++I P+  E     G    + G I  A +    A +I+P  A+A
Sbjct: 1177 LRRGDISGAMENFEAAIQINPNYAEGHNNRGFTKFRRGDIPGAMKDFEAAIQINPNYAEA 1236

Query: 413  FIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFK 472
            +                                      NN+G   F+ G+F+ A + F 
Sbjct: 1237 Y--------------------------------------NNLGNSRFQTGDFQGAMRDFG 1258

Query: 473  DALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVL--FN 530
            + L        +  K      + + ++L+  D   F     D  +  L  N    L  +N
Sbjct: 1259 ETLR-------IHPKYVPAYNNRALALLKLGD---FSGATTDC-YQALKINPKYGLAYYN 1307

Query: 531  LARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNG 590
            L  +  ++ D   A + Y  +L  Y   +DAY+    I     N   +I+    AL +N 
Sbjct: 1308 LGLIHTEMGDLEQAILDYNEVLRIYPRKIDAYVNRGLIYLKLKNYTQAIKDQTSALNINP 1367

Query: 591  KYPNALSM-------LGDLELKNDDWVKAKETFR 617
              P+  S        LG+ +   DD  KA E ++
Sbjct: 1368 NLPHVYSFRSEGYIQLGEFKAGIDDLHKAAEIYQ 1401



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 105/506 (20%), Positives = 204/506 (40%), Gaps = 81/506 (16%)

Query: 354  KLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAF 413
            ++G+ + A+ NF+K LE+ P + +T   LG  YV+LG+  +A EL  +A K+D +D+Q +
Sbjct: 906  QMGNLKGAIENFKKALELEPKDLQTYNNLGAAYVELGEFNEAIELFSQALKVDSQDSQIY 965

Query: 414  IDLGEL-LISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFK 472
             +LG +   + D   A+  +  A  L        P E   N G+ +   G  + A   F 
Sbjct: 966  QNLGVVRFKAGDKQGAIADYNQAIKL----NPNKP-EAYYNRGIAYRFLGHNQDAMNDFT 1020

Query: 473  DALGDGIWLTLLDSKTKTYVI-----DASASMLQFKDMQLFHRFENDGNHVELPWNKVTV 527
              L   +   ++D+ T+  ++     D   ++  F D       + +  H E  +N+  +
Sbjct: 1021 KVL--QLHPRVVDAYTQRGIVRFEVKDIEGAIADFNDA-----IKLNPKHPEAIYNRAII 1073

Query: 528  ----------LFNLARLLEQIHDTVAASVLYRLILFKYQDY-----------------VD 560
                      L +L ++++     + A +   ++ F   D+                  +
Sbjct: 1074 RRLTKDNQGSLDDLNKVIQLHPKYIDAYIKRSIVRFDLGDHEGALKDLDSAVQLQPNNAE 1133

Query: 561  AYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAA- 619
            AY + A   ++  ++  +I     A+++N KY  A + +G + L+  D   A E F AA 
Sbjct: 1134 AYYQRANTKRSMGDILSAIADFENAIRLNPKYHQAYNDMGIVRLRRGDISGAMENFEAAI 1193

Query: 620  ---SDATDG------------------KDSYATLSLGNWNYFAALRNEKRAPKLEATHLE 658
                +  +G                  KD  A + + N NY  A  N   + + +    +
Sbjct: 1194 QINPNYAEGHNNRGFTKFRRGDIPGAMKDFEAAIQI-NPNYAEAYNNLGNS-RFQTGDFQ 1251

Query: 659  KAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFD-VSKDLFTQVQEAASGSVFVQMPDVW 717
             A   +   +  H   + A N   + L + G F   + D +  ++      +       +
Sbjct: 1252 GAMRDFGETLRIHPKYVPAYNNRALALLKLGDFSGATTDCYQALKINPKYGL------AY 1305

Query: 718  INLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQI---LLYLARTHYEAEQWQDCKKSLL 774
             NL  ++   G+   A+  Y   LR +    DA +   L+YL   +Y  +  +D   +L 
Sbjct: 1306 YNLGLIHTEMGDLEQAILDYNEVLRIYPRKIDAYVNRGLIYLKLKNY-TQAIKDQTSALN 1364

Query: 775  RAIHLAPSNYTLRFDAGVAMQKFSAS 800
               +L P  Y+ R +  + + +F A 
Sbjct: 1365 INPNL-PHVYSFRSEGYIQLGEFKAG 1389


>gi|159028674|emb|CAO88145.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 837

 Score = 79.7 bits (195), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 84/316 (26%), Positives = 137/316 (43%), Gaps = 30/316 (9%)

Query: 108 EHFILATQYYNKASRI--DMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPAL 165
           E +  A   Y++A  I  D HE   W  +G  L   G +E+A +++   LE   D   A 
Sbjct: 486 EQYQEAIASYDRALEIKPDYHE--AWYNRGIALDDLGRLEEAIASYDRALEIKPDKHEAW 543

Query: 166 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 225
             +     N GR+  ++  Y RAL++ P    A     G     LG+  +A  ++ RAL+
Sbjct: 544 YNRGFALGNLGRFEQAIASYDRALEIKPDKHEAW-YNRGFALGNLGRFEQAIASYDRALE 602

Query: 226 LDPENVEALV--ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQ 283
           + P+  EA      A+ +L   E A     +    RA EI P          +H  +  +
Sbjct: 603 IKPDKHEAWYNRGFALGNLGRFEQA-----IASYDRALEIKP---------DDHEAWNNR 648

Query: 284 HFLVEQLT--ETALAVTNHG----PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINK 337
              ++ L   E A+A  +      P K  ++YN   +  + G +E+A   Y  +++    
Sbjct: 649 GIALDDLGRLEEAIASFDRALEIKPDKHEAWYNRGFALGNLGRFEQAIASYDRALEIKPD 708

Query: 338 PHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQE 397
            HE    +Y  G     LG F  A+ ++++ LEI PD+ E     G     LG+ E+A  
Sbjct: 709 KHE---AWYNRGFALGNLGRFEQAIASYDRALEIKPDDHEAWNNRGIALGNLGRFEEAIA 765

Query: 398 LLRKAAKIDPRDAQAF 413
              +A KI+  DA A+
Sbjct: 766 SFDRAIKINSNDADAY 781



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 107/446 (23%), Positives = 169/446 (37%), Gaps = 65/446 (14%)

Query: 162 VPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQ 221
           +P+L G     +   RY D+L+ + R +   P          G     L Q  +A  ++ 
Sbjct: 438 LPSLAGFTLKLYELKRYQDALKGFNRLVSFAPQWEDGW-FYRGTTFGYLEQYQEAIASYD 496

Query: 222 RALQLDPENVEALV--ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFF 279
           RAL++ P+  EA     +A+ DL       + + +    RA EI P    A     N  F
Sbjct: 497 RALEIKPDYHEAWYNRGIALDDL-----GRLEEAIASYDRALEIKPDKHEA---WYNRGF 548

Query: 280 FTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPH 339
             G     EQ   +        P K  ++YN   +  + G +E+A   Y  +++     H
Sbjct: 549 ALGNLGRFEQAIASYDRALEIKPDKHEAWYNRGFALGNLGRFEQAIASYDRALEIKPDKH 608

Query: 340 EFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELL 399
           E    +Y  G     LG F  A+ ++++ LEI PD+ E     G     LG++E+A    
Sbjct: 609 E---AWYNRGFALGNLGRFEQAIASYDRALEIKPDDHEAWNNRGIALDDLGRLEEAIASF 665

Query: 400 RKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPI--EVLNNIGVI 457
            +A +I P   +A+ + G  L        L  F+ A     +A E  P   E   N G  
Sbjct: 666 DRALEIKPDKHEAWYNRGFAL------GNLGRFEQAIASYDRALEIKPDKHEAWYNRGFA 719

Query: 458 HFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNH 517
               G FE A  S+  AL                        ++  D + ++        
Sbjct: 720 LGNLGRFEQAIASYDRAL-----------------------EIKPDDHEAWN-------- 748

Query: 518 VELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQL 577
                N+   L NL R  E I      +   R I     D  DAY   A     +NN++L
Sbjct: 749 -----NRGIALGNLGRFEEAI------ASFDRAIKINSND-ADAYYNKACCYGLQNNVEL 796

Query: 578 SIELVNEALKVNGKYPNALSMLGDLE 603
           +IE +  A+ ++ KY +      D E
Sbjct: 797 AIENLQRAINLDVKYQDMAKTDKDFE 822


>gi|216263769|ref|ZP_03435763.1| TPR domain protein [Borrelia afzelii ACA-1]
 gi|215979813|gb|EEC20635.1| TPR domain protein [Borrelia afzelii ACA-1]
          Length = 379

 Score = 79.7 bits (195), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 76/318 (23%), Positives = 135/318 (42%), Gaps = 14/318 (4%)

Query: 123 IDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSL 182
           +D+ E S    +G  L+ +  + +A S F  +LE D +N  AL+G   +E  +  Y  ++
Sbjct: 22  LDVTEKSK---RGYQLIKEERLSEAESLFSNILEKDNENNYALVGLGDIERKKNNYDKAI 78

Query: 183 EFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDL 242
            +Y+R L  HP+   A+  G+G C   L    KA   ++  L+ DPEN+  L  +A    
Sbjct: 79  VYYQRCLIKHPNNNYAL-FGLGDCYRNLDNYKKATDIWEEYLKYDPENITVLTRVAS--- 134

Query: 243 QANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGP 302
              +    +K  +   +  E+ P    AL  +  H ++  + +         +   N   
Sbjct: 135 SYRKLKNFQKSKQTYLKVMELMPENDYALVGIG-HLYYDFKEYKEALKYWLKMYELNQSK 193

Query: 303 TKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSAL 362
                  ++   Y    ++ + G+Y+     EI+ P  F +  +GL        +++ AL
Sbjct: 194 VDVRVLTSIGNCYRKLREFTR-GIYFFKKALEIS-PSNF-YAIFGLADCYRGNKEYKEAL 250

Query: 363 TNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS 422
             +  ++E  P N   L  +G  Y  L   E AQ   +KA  +   D   F  LG  LI 
Sbjct: 251 KYWLDIIEKDPKNNLVLTRVGDAYRYLNDYENAQIYYKKALDV---DFDMFAILGLALIQ 307

Query: 423 SDTGAALDAFKTARTLLK 440
            + G   +A    ++L+K
Sbjct: 308 KEQGKYEEALIAIKSLIK 325


>gi|51598455|ref|YP_072643.1| hypothetical protein BG0193 [Borrelia garinii PBi]
 gi|51573026|gb|AAU07051.1| conserved hypothetical protein [Borrelia garinii PBi]
          Length = 379

 Score = 79.3 bits (194), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 75/318 (23%), Positives = 135/318 (42%), Gaps = 14/318 (4%)

Query: 123 IDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSL 182
           +D+ E S    +G  L+ +  + +A S F  +LE D +N  AL+G   +E  +  Y  ++
Sbjct: 22  LDVTEKSK---RGYQLIKEERLSEAESLFSDILEKDNENNYALVGLGDIERKKNNYDKAI 78

Query: 183 EFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDL 242
            +Y+R L  HP+   A+  G+G C   L    KA   ++  L+ DPEN+  L  +A    
Sbjct: 79  VYYQRCLVKHPNNNYAL-FGLGDCYRNLDDYKKATDIWEEYLKYDPENITVLTRVAA--- 134

Query: 243 QANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGP 302
              +    +K  +   +  E+ P    AL  +  H ++  + +         +   N   
Sbjct: 135 SYRKLKNFQKSKQTYLKVMELIPENDYALVGIG-HLYYDFKEYKEALKYWLKMYELNQSK 193

Query: 303 TKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSAL 362
                  ++   Y    ++ + G+Y+     EI+ P  F +  +GL        D++ AL
Sbjct: 194 VDVRVLTSIGNCYRKLREFTR-GIYFFKKALEIS-PSNF-YAVFGLADCYRGNKDYKEAL 250

Query: 363 TNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS 422
             +  ++E  P N   L  +G  Y  L   E +Q   +KA  +   D   F  LG  L+ 
Sbjct: 251 KYWLDIVEKDPKNNLVLTRVGDAYRYLNDYENSQIYYKKALDV---DFDMFAILGLALLQ 307

Query: 423 SDTGAALDAFKTARTLLK 440
            + G   +A    ++L+K
Sbjct: 308 KEQGRYEEALIAIKSLIK 325


>gi|408670822|ref|YP_006870893.1| hypothetical protein BgCN_0192 [Borrelia garinii NMJW1]
 gi|407240644|gb|AFT83527.1| hypothetical protein BgCN_0192 [Borrelia garinii NMJW1]
          Length = 379

 Score = 79.3 bits (194), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 75/318 (23%), Positives = 135/318 (42%), Gaps = 14/318 (4%)

Query: 123 IDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSL 182
           +D+ E S    +G  L+ +  + +A S F  +LE D +N  AL+G   +E  +  Y  ++
Sbjct: 22  LDVTEKSK---RGYQLIKEERLSEAESLFSDILEKDNENNYALVGLGDIERKQNNYDKAI 78

Query: 183 EFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDL 242
            +Y+R L  HP+   A+  G+G C   L    KA   ++  L+ DPEN+  L  +A    
Sbjct: 79  VYYQRCLVKHPNNNYAL-FGLGDCYRNLDDYKKATDIWEEYLKYDPENITVLTRVAA--- 134

Query: 243 QANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGP 302
              +    +K  +   +  E+ P    AL  +  H ++  + +         +   N   
Sbjct: 135 SYRKLKNFQKSKQTYLKVMELMPENDYALVGIG-HLYYDFKEYKEALRYWLKMYELNQSK 193

Query: 303 TKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSAL 362
                  ++   Y    ++ + G+Y+     EI+ P  F +  +GL        D++ AL
Sbjct: 194 VDVRVLTSIGNCYRKLREFTR-GIYFFKKALEIS-PSNF-YAVFGLADCYRGNKDYKEAL 250

Query: 363 TNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS 422
             +  ++E  P N   L  +G  Y  L   E +Q   +KA  +   D   F  LG  L+ 
Sbjct: 251 KYWLDIVEKDPKNNLVLTRVGDAYRYLNDYENSQIYYKKALDV---DFDMFAILGLALLQ 307

Query: 423 SDTGAALDAFKTARTLLK 440
            + G   +A    ++L+K
Sbjct: 308 KEQGRYEEALIAIKSLIK 325


>gi|386853601|ref|YP_006202886.1| hypothetical protein KK9_0193 [Borrelia garinii BgVir]
 gi|365193635|gb|AEW68533.1| Hypothetical protein KK9_0193 [Borrelia garinii BgVir]
          Length = 379

 Score = 79.3 bits (194), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 75/318 (23%), Positives = 135/318 (42%), Gaps = 14/318 (4%)

Query: 123 IDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSL 182
           +D+ E S    +G  L+ +  + +A S F  +LE D +N  AL+G   +E  +  Y  ++
Sbjct: 22  LDVTEKSK---RGYQLIKEERLSEAESLFSDILEKDNENNYALVGLGDIERKQNNYDKAI 78

Query: 183 EFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDL 242
            +Y+R L  HP+   A+  G+G C   L    KA   ++  L+ DPEN+  L  +A    
Sbjct: 79  VYYQRCLVKHPNNNYAL-FGLGDCYRNLDDYKKATDIWEEYLKYDPENITVLTRVAA--- 134

Query: 243 QANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGP 302
              +    +K  +   +  E+ P    AL  +  H ++  + +         +   N   
Sbjct: 135 SYRKLKNFQKSKQTYLKVMELMPENDYALVGIG-HLYYDFKEYREALKYWLKMYELNQSK 193

Query: 303 TKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSAL 362
                  ++   Y    ++ + G+Y+     EI+ P  F +  +GL        D++ AL
Sbjct: 194 VDVRVLTSIGNCYRKLREFTR-GIYFFKKALEIS-PSNF-YAVFGLADCYRGNKDYKEAL 250

Query: 363 TNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS 422
             +  ++E  P N   L  +G  Y  L   E +Q   +KA  +   D   F  LG  L+ 
Sbjct: 251 KYWLDIVEKDPKNNLVLTRVGDAYRYLNDYENSQIYYKKALDV---DFDMFAILGLALLQ 307

Query: 423 SDTGAALDAFKTARTLLK 440
            + G   +A    ++L+K
Sbjct: 308 KEQGRYEEALIAIKSLIK 325


>gi|386001554|ref|YP_005919853.1| putative membrane protein, containing TPR repeats [Methanosaeta
           harundinacea 6Ac]
 gi|357209610|gb|AET64230.1| putative membrane protein, containing TPR repeats [Methanosaeta
           harundinacea 6Ac]
          Length = 463

 Score = 79.3 bits (194), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 98/369 (26%), Positives = 155/369 (42%), Gaps = 18/369 (4%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
           A   Y+ A  +D      W  KG  L A G  E+A + +   LE D D  PA   +  V 
Sbjct: 51  AVASYDNALELDPEYALAWNNKGIALSALGRNEEALACYNRSLEIDPDYAPAWNNRGVVL 110

Query: 173 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 232
              GR  ++LE Y RAL+V P+   A     G   Y  G   ++ + ++RAL++DP + E
Sbjct: 111 EALGRGDEALESYDRALEVDPAYALAWS-NQGGVFYSRGDYNRSIECYERALEIDPRSRE 169

Query: 233 ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTE 292
           A   L      A E     + +E    A +I P  A A N         G+H       E
Sbjct: 170 AWNNLGRSLFAAGE---YERSIEGYDEALKIDPLYATAWNNKGIALGTLGRHQEALDCYE 226

Query: 293 TALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQ 352
            AL +    P+   + YN   +    G  E+A   Y A +K       +   +Y  G   
Sbjct: 227 EALKIE---PSHVMALYNKGIALGLLGRQEEAVECYDAVLK---VDPSYPPAWYNRGVAL 280

Query: 353 LKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQA 412
             LG    A  ++++ L++ P   +     G     LG+ E+A +  ++A +IDP  +QA
Sbjct: 281 GLLGRQEQAAASYDEALKLDPGYAQAWNNRGIALGSLGRQEEALQSYQRALEIDPAYSQA 340

Query: 413 FIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQS 470
           + + G         +AL  ++ A +   +A E  P   E  NN G+     G  + A + 
Sbjct: 341 WYNQGVAF------SALGRYQEAISSYDRALELDPELSEAWNNKGIALSALGRHQEAIEC 394

Query: 471 FKDALGDGI 479
           ++ AL  G+
Sbjct: 395 YERALEVGL 403


>gi|406982865|gb|EKE04132.1| hypothetical protein ACD_20C00104G0026 [uncultured bacterium]
          Length = 356

 Score = 79.3 bits (194), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 83/340 (24%), Positives = 146/340 (42%), Gaps = 58/340 (17%)

Query: 98  KIETKQREKEEHFILAT------------QYYNKASRIDMHEPSTWVGKGQLLLAKGEVE 145
           KI+      E +F+L T            + Y +   ID       V  G  L   G+V+
Sbjct: 18  KIQETPDNVEAYFVLGTTLALSGKLEESLKTYRELLSIDSVNVQALVNIGSTLFLMGKVD 77

Query: 146 QASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGL 205
           +A   +K  +E + ++V A +  A      G+Y +++E YK+++++ P    A    +GL
Sbjct: 78  EAIDNYKKAIELNPESVSAYMNLANTYAEIGKYDEAIEGYKKSIEISPDNIDAYS-SLGL 136

Query: 206 CRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYP 265
               L +  +A + ++ AL+LDPEN E  V +A + +Q  +           + A E Y 
Sbjct: 137 AFQDLRKYDEAMENYRSALKLDPENYEHYVNVASVYMQKTQ----------FEDAIEFYK 186

Query: 266 YCAMALNYLANHFFFTGQHFLVEQLTETALAVTN-HGPTKSHSYYNLARSYHSKGDYEKA 324
               A+N+  N +         + L   A A++      KS  YY  A +   K DY KA
Sbjct: 187 ---KAVNFNNNDY---------KSLICIANALSELKKYNKSFEYYQKALA--VKPDYAKA 232

Query: 325 GLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGH 384
            L Y  S+ E                     G+ + A+  + KV+E+ P N      L +
Sbjct: 233 HLCYGISLSE--------------------SGNIKKAIEEYRKVIELDPTNSRGYMILAN 272

Query: 385 IYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSD 424
           I V+ G  ++A +  +KA ++D  +  A++ +G   + +D
Sbjct: 273 ILVEEGLYDEAVDNYKKAIELDNTNVLAYVAIGNTFVLTD 312



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 50/209 (23%), Positives = 89/209 (42%), Gaps = 9/209 (4%)

Query: 212 QLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMAL 271
           +L K  +  ++ +Q  P+NVEA   L         +  + + ++  +    I      AL
Sbjct: 7   ELNKVIEGARKKIQETPDNVEAYFVLGTT---LALSGKLEESLKTYRELLSIDSVNVQAL 63

Query: 272 NYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMAS 331
             + +  F  G+   V++  +         P    +Y NLA +Y   G Y++A   Y  S
Sbjct: 64  VNIGSTLFLMGK---VDEAIDNYKKAIELNPESVSAYMNLANTYAEIGKYDEAIEGYKKS 120

Query: 332 VKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQ 391
           + EI+  +  I  Y  LG     L  +  A+ N+   L++ P+N E    +  +Y+Q  Q
Sbjct: 121 I-EISPDN--IDAYSSLGLAFQDLRKYDEAMENYRSALKLDPENYEHYVNVASVYMQKTQ 177

Query: 392 IEKAQELLRKAAKIDPRDAQAFIDLGELL 420
            E A E  +KA   +  D ++ I +   L
Sbjct: 178 FEDAIEFYKKAVNFNNNDYKSLICIANAL 206



 Score = 40.0 bits (92), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 34/139 (24%), Positives = 68/139 (48%), Gaps = 2/139 (1%)

Query: 115 QYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFN 174
           +YY KA  +        +  G  L   G +++A   ++ V+E D  N    +  A +   
Sbjct: 217 EYYQKALAVKPDYAKAHLCYGISLSESGNIKKAIEEYRKVIELDPTNSRGYMILANILVE 276

Query: 175 RGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEAL 234
            G Y ++++ YK+A+++  +   A  + IG       +L +A + +++A Q+DP+N E  
Sbjct: 277 EGLYDEAVDNYKKAIELDNTNVLA-YVAIGNTFVLTDKLEEALKYYRQASQIDPDNDEIY 335

Query: 235 VALA-VMDLQANEAAGIRK 252
           +  A  +D  A+++  I K
Sbjct: 336 MIYADAVDEYASKSNNIMK 354


>gi|282897129|ref|ZP_06305131.1| TPR repeat protein [Raphidiopsis brookii D9]
 gi|281197781|gb|EFA72675.1| TPR repeat protein [Raphidiopsis brookii D9]
          Length = 1279

 Score = 79.3 bits (194), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 109/516 (21%), Positives = 201/516 (38%), Gaps = 56/516 (10%)

Query: 117 YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 176
           Y +A +ID +    +  +G +    G  + A   +   L  D +             N  
Sbjct: 432 YTQAIKIDPNYAQAYNNRGAIRTYLGNYQGAIDDYIQALRVDSNYAEVYHNWGTTRINLE 491

Query: 177 RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVA 236
               +++ Y +AL ++P+   A   G G+ R+ LG    A   + +AL ++P   +A   
Sbjct: 492 DNQGAIDDYTQALNINPNYAQAY-YGRGIARFNLGDKQGAIDDYTQALNINPNYAQAYYN 550

Query: 237 LAVMDLQANEAAGIRKG-MEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETAL 295
             +    A  + G ++G ++   +A  I P      NY   ++ +     +  +L +   
Sbjct: 551 RGI----ARTSLGDKQGAVDDYTQALNINP------NYDQAYYAWG---MVCSELGDKPG 597

Query: 296 AVTNH------GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLG 349
           AV N+       P    +Y     +    GD + A   Y    + +N   ++ + Y   G
Sbjct: 598 AVNNYTQALNINPDDPETYIARGLTRSELGDNQGAIDDY---TQALNLNPDYAYIYNNRG 654

Query: 350 QVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRD 409
            V+  + D++ A+ ++ + L I PD  +     G  Y  LG  + A +   ++ +I P  
Sbjct: 655 VVRSDIADYQRAIDDYTQALNISPDYADAYYNRGIAYYDLGNYQSAIDDYTRSIEIKPNC 714

Query: 410 AQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAH 468
           A  ++  G  L    D+  A++ F  A  +     +    +  NN G++ +E G+++ A 
Sbjct: 715 ADTYVGRGTALYKLGDSQGAINDFHHALDI-----DASYADAYNNRGIVRYELGDYQGAI 769

Query: 469 QSFKDALGDGIWLTLLDSKTKTYVI-----DASASMLQFKDMQLFHRFENDGNHVELPWN 523
             F  AL   I      +     ++     D   +M  F      H    + N+ +   N
Sbjct: 770 NDFNHALN--INPNYAQAYNNRGIVRYELRDNQGAMEDFN-----HAVNINSNYAQAYNN 822

Query: 524 KVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVN 583
           +  V   L      I D   A      I+  Y +Y ++Y+          N Q +IE  N
Sbjct: 823 RGIVRICLGERQLAIEDFSQA------IIIAY-NYTESYINRGYARYELGNRQKAIEDFN 875

Query: 584 EALKVNGKYPNALSM-------LGDLELKNDDWVKA 612
           +AL +N  Y  A +        LGD E   DD+ +A
Sbjct: 876 QALNINPNYAQAYNNRGVAYTDLGDREWAKDDFSQA 911



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 137/662 (20%), Positives = 256/662 (38%), Gaps = 87/662 (13%)

Query: 52  KQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFI 111
           KQG ++ F Q++       I+ ++AD               Y   G +    R  +E   
Sbjct: 323 KQGAIDDFNQVIT------INPHFADG--------------YAARGLVYCDLRNYQE--- 359

Query: 112 LATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACV 171
            A   +N+  RI+ +    +  +G      G+ + A   +   L  +     A   +  +
Sbjct: 360 -AINDFNQTIRINPNYAQAYHNRGVARSQLGDKQGAIDDYTHSLNLNPKFASAYYNRGII 418

Query: 172 EFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENV 231
             + G    +++ Y +A+++ P+   A     G  R  LG    A   + +AL++D    
Sbjct: 419 RSDLGSQKAAMDDYTQAIKIDPNYAQAYN-NRGAIRTYLGNYQGAIDDYIQALRVDSNYA 477

Query: 232 EALVALAV--MDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLAN---HFFFTGQHFL 286
           E         ++L+ N+ A     ++   +A  I P  A A  Y       F    +   
Sbjct: 478 EVYHNWGTTRINLEDNQGA-----IDDYTQALNINPNYAQA--YYGRGIARFNLGDKQGA 530

Query: 287 VEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYY 346
           ++  T+      N  P  + +YYN   +  S GD + A   Y    + +N    +   YY
Sbjct: 531 IDDYTQ----ALNINPNYAQAYYNRGIARTSLGDKQGAVDDY---TQALNINPNYDQAYY 583

Query: 347 GLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKID 406
             G V  +LGD   A+ N+ + L I PD+ ET  A G    +LG  + A +   +A  ++
Sbjct: 584 AWGMVCSELGDKPGAVNNYTQALNINPDDPETYIARGLTRSELGDNQGAIDDYTQALNLN 643

Query: 407 PRDAQAFIDLGELLISSDTGA---ALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGE 463
           P  A  + + G  ++ SD      A+D +  A  +          +   N G+ +++ G 
Sbjct: 644 PDYAYIYNNRG--VVRSDIADYQRAIDDYTQALNISPDYA-----DAYYNRGIAYYDLGN 696

Query: 464 FESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQ-----LFHRFENDGNHV 518
           ++SA   +  +      + +  +   TYV   +A + +  D Q       H  + D ++ 
Sbjct: 697 YQSAIDDYTRS------IEIKPNCADTYVGRGTA-LYKLGDSQGAINDFHHALDIDASYA 749

Query: 519 ELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLS 578
           +   N+  V + L      I+D       +   L    +Y  AY     +     + Q +
Sbjct: 750 DAYNNRGIVRYELGDYQGAIND-------FNHALNINPNYAQAYNNRGIVRYELRDNQGA 802

Query: 579 IELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWN 638
           +E  N A+ +N  Y  A +  G + +   +   A E F  A              +  +N
Sbjct: 803 MEDFNHAVNINSNYAQAYNNRGIVRICLGERQLAIEDFSQA-------------IIIAYN 849

Query: 639 YFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLF 698
           Y  +  N   A + E  + +KA E + + +  + +   A N  GV   + G  + +KD F
Sbjct: 850 YTESYINRGYA-RYELGNRQKAIEDFNQALNINPNYAQAYNNRGVAYTDLGDREWAKDDF 908

Query: 699 TQ 700
           +Q
Sbjct: 909 SQ 910



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 102/461 (22%), Positives = 179/461 (38%), Gaps = 79/461 (17%)

Query: 53   QGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFIL 112
            Q  ++ + Q L    SP+    YAD  Y R       G+ Y  LG  ++           
Sbjct: 664  QRAIDDYTQALN--ISPD----YADAYYNR-------GIAYYDLGNYQS----------- 699

Query: 113  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
            A   Y ++  I  +   T+VG+G  L   G+ + A + F   L+ D     A   +  V 
Sbjct: 700  AIDDYTRSIEIKPNCADTYVGRGTALYKLGDSQGAINDFHHALDIDASYADAYNNRGIVR 759

Query: 173  FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 232
            +  G Y  ++  +  AL ++P+   A     G+ RY+L     A + F  A+ ++    +
Sbjct: 760  YELGDYQGAINDFNHALNINPNYAQAYN-NRGIVRYELRDNQGAMEDFNHAVNINSNYAQ 818

Query: 233  ALVALAVMDLQANEAAGIRKGMEKMQRAFEI-YPYCAMALNYLANHFFFTGQHFLVEQLT 291
            A     ++ +   E    +  +E   +A  I Y Y    +N     +    +   +E   
Sbjct: 819  AYNNRGIVRICLGER---QLAIEDFSQAIIIAYNYTESYINRGYARYELGNRQKAIEDFN 875

Query: 292  ETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQ- 350
            +      N  P  + +Y N   +Y   GD E A   +  +++        I PYY     
Sbjct: 876  Q----ALNINPNYAQAYNNRGVAYTDLGDREWAKDDFSQAIQ--------INPYYAEAYN 923

Query: 351  ----VQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKID 406
                V  +LGD + A+ +F + L I  +  E     G+I  +LG  + A E   +A  + 
Sbjct: 924  NRAIVCYELGDHQGAIEDFNQALNINSNYVEAYNKRGNIRYELGDRQGAIEDFNRALNL- 982

Query: 407  PRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLN--NIGVIHFEK--- 461
                   +DLGE L                   ++ G  + I++ N  N+ ++ FE    
Sbjct: 983  -----GSLDLGENL----------------KFWERGGLTLTIKLRNYLNLKILSFEVVSK 1021

Query: 462  ---GEFESAHQS---FKDALGDGIWLTLLDSKTKTYVIDAS 496
               GE      S   F + LGD I L +++    T+ I+++
Sbjct: 1022 KNFGEIIKTDASVIYFVEDLGDDITLEMVEIPGGTFTINSA 1062



 Score = 46.2 bits (108), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 99/463 (21%), Positives = 176/463 (38%), Gaps = 64/463 (13%)

Query: 310 NLARSYHSKGDYEKAGLYYMASVKEINKP----HEFIFPYYGLGQVQLKLGDFRSALTNF 365
           NLA + +S+G   +   Y   ++++ N+       F   Y   G  +  LGD + A+ +F
Sbjct: 271 NLALAAYSRGVAHRDMGYLQKAIEDFNQTLHLNSAFFDAYTKRGLARYDLGDKQGAIDDF 330

Query: 366 EKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SD 424
            +V+ I P   +   A G +Y  L   ++A     +  +I+P  AQA+ + G       D
Sbjct: 331 NQVITINPHFADGYAARGLVYCDLRNYQEAINDFNQTIRINPNYAQAYHNRGVARSQLGD 390

Query: 425 TGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALG-DGIWLTL 483
              A+D +  +  L  K           N G+I  + G  ++A   +  A+  D  +   
Sbjct: 391 KQGAIDDYTHSLNLNPKFA-----SAYYNRGIIRSDLGSQKAAMDDYTQAIKIDPNYAQA 445

Query: 484 LDSK--TKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDT 541
            +++   +TY+ +   ++  +           D N+ E+  N  T   NL        D 
Sbjct: 446 YNNRGAIRTYLGNYQGAIDDY-----IQALRVDSNYAEVYHNWGTTRINL-------EDN 493

Query: 542 VAASVLYRLILFKYQDYVDAYLRLAAIAKARNNL---QLSIELVNEALKVNGKYPNAL-- 596
             A   Y   L    +Y  AY        AR NL   Q +I+   +AL +N  Y  A   
Sbjct: 494 QGAIDDYTQALNINPNYAQAYY---GRGIARFNLGDKQGAIDDYTQALNINPNYAQAYYN 550

Query: 597 -----SMLGDLELKNDDWVKA--------KETFRAASDATDGKDSYATLSLGNWNYFAAL 643
                + LGD +   DD+ +A        +  +      ++  D    ++    NY  AL
Sbjct: 551 RGIARTSLGDKQGAVDDYTQALNINPNYDQAYYAWGMVCSELGDKPGAVN----NYTQAL 606

Query: 644 RNEKRAP---------KLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVS 694
                 P         + E    + A + YT+ +  +    Y  N  GVV ++   +  +
Sbjct: 607 NINPDDPETYIARGLTRSELGDNQGAIDDYTQALNLNPDYAYIYNNRGVVRSDIADYQRA 666

Query: 695 KDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMY 737
            D +TQ       ++     D + N    Y+  GN+  A+  Y
Sbjct: 667 IDDYTQAL-----NISPDYADAYYNRGIAYYDLGNYQSAIDDY 704


>gi|440747552|ref|ZP_20926809.1| TPR repeat protein [Mariniradius saccharolyticus AK6]
 gi|436484022|gb|ELP40042.1| TPR repeat protein [Mariniradius saccharolyticus AK6]
          Length = 398

 Score = 79.3 bits (194), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 78/305 (25%), Positives = 131/305 (42%), Gaps = 70/305 (22%)

Query: 142 GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAI-- 199
           G+ E A +    +LE D  +   +  +  + +  G+Y+ +LE +   L + P     I  
Sbjct: 71  GDTEGALTDLNSLLELDPLHYDGIFLRGTMRYRLGQYALALEDFSNLLHIPPGPTQTIIY 130

Query: 200 -RLG----------------------IGLCRYKLGQLGKARQAFQRALQLDPENVEALVA 236
            R G                      IGLC+  LG+  +A+++F  A+ L P   +  + 
Sbjct: 131 QRKGYQSGVSGVFTQQSGNNAHVFENIGLCQLALGEWREAKKSFDEAISLAPGTADYYLH 190

Query: 237 LAVMDLQANEAAG-IRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETAL 295
                 +A E AG   +  E   +A +I PY  MA  YLA                  AL
Sbjct: 191 RG----RAFEMAGDTARAKEDFMKALDINPYHPMAHQYLA------------------AL 228

Query: 296 AVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKL 355
           A                   ++ GD+E A  +Y  +++  ++P +F   Y   G  +L+ 
Sbjct: 229 A-------------------NATGDWESAEKFYDQAIE--DQP-DFALSYKQRGYQRLRA 266

Query: 356 GDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFID 415
             +  AL +F+KVLEI PD+ E LK   ++  +L + ++A EL  +A  ++P DAQA+  
Sbjct: 267 EKWTEALEDFDKVLEIQPDDAEALKYKAYVLQKLKRADQALELYNRAIGLNPMDAQAYFS 326

Query: 416 LGELL 420
            G +L
Sbjct: 327 KGNIL 331



 Score = 40.8 bits (94), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 35/132 (26%), Positives = 55/132 (41%), Gaps = 12/132 (9%)

Query: 344 PYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAA 403
           PYY    V+ + GD   ALT+   +LE+ P + + +   G +  +LGQ   A E      
Sbjct: 59  PYYYRSLVRDRAGDTEGALTDLNSLLELDPLHYDGIFLRGTMRYRLGQYALALEDFSNLL 118

Query: 404 KIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGE 463
            I P   Q  I   +   S  +G             +++G      V  NIG+     GE
Sbjct: 119 HIPPGPTQTIIYQRKGYQSGVSG----------VFTQQSGNNA--HVFENIGLCQLALGE 166

Query: 464 FESAHQSFKDAL 475
           +  A +SF +A+
Sbjct: 167 WREAKKSFDEAI 178


>gi|225552373|ref|ZP_03773313.1| TPR domain protein [Borrelia sp. SV1]
 gi|225371371|gb|EEH00801.1| TPR domain protein [Borrelia sp. SV1]
          Length = 379

 Score = 79.3 bits (194), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 76/318 (23%), Positives = 136/318 (42%), Gaps = 14/318 (4%)

Query: 123 IDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSL 182
           +D+ E S    +G  L+ +  + +A S F  +LE D +N  AL+G   +E  +  Y  ++
Sbjct: 22  LDVTEKSK---RGYQLIKEERLSEAESLFSDILEKDNENNYALVGLGDIERKKNNYDKAI 78

Query: 183 EFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDL 242
            +Y++ L  HPS   A+  G+G C   L    KA   ++  L+ DPEN+  L  +A    
Sbjct: 79  VYYQKCLVKHPSNNYAL-FGLGDCYRNLDNYKKATDIWEEYLKYDPENITVLTRVAASYR 137

Query: 243 QANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGP 302
           + N     +K  +   +  E+ P    AL  +  H ++  + +         +   N   
Sbjct: 138 KLN---NFQKSKQTYLKVMELMPDNDYALVGIG-HLYYDFKEYKEALKYWLKMYELNQSK 193

Query: 303 TKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSAL 362
                  ++   Y    ++ + G+Y+     EI+ P  F +  +GL        +++ AL
Sbjct: 194 VDVRVLTSIGNCYRKLREFTR-GIYFFKKALEIS-PSNF-YAVFGLADCYRGNKEYKEAL 250

Query: 363 TNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS 422
             +  ++E  P N   L  +G  Y  L   E +Q   +KA  +   D   F  LG  LI 
Sbjct: 251 KYWLDIIEKDPKNNLVLTRVGDAYRYLNDYENSQIYYKKALDV---DFDMFAILGLALIQ 307

Query: 423 SDTGAALDAFKTARTLLK 440
            + G   +A    ++L+K
Sbjct: 308 KEQGKYEEALIAIKSLIK 325


>gi|269925204|ref|YP_003321827.1| hypothetical protein Tter_0083 [Thermobaculum terrenum ATCC BAA-798]
 gi|269788864|gb|ACZ41005.1| Tetratricopeptide TPR_2 repeat protein [Thermobaculum terrenum ATCC
            BAA-798]
          Length = 2240

 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 164/759 (21%), Positives = 310/759 (40%), Gaps = 107/759 (14%)

Query: 89   LGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQAS 148
            LG+ Y  LG  E            A +++  A  +D   P     K ++ LA   +++ +
Sbjct: 1183 LGMLYMDLGLQEK-----------ALRHHEIACSLDDRSPEY---KYRMALALIHLKRYA 1228

Query: 149  SAFKIVLEADRDNVPAL-----LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGI 203
             A   +L A + N  A      LG+A +  ++  Y ++++ +++A+++ PS     R  +
Sbjct: 1229 EAIDTILTAIQANPEAAEYYHALGRAHMGLSQ--YEEAVQAFEKAVRIAPSVAQYHR-DL 1285

Query: 204  GLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQ-ANEAAG-IRKGMEKMQRAF 261
            G+    + + G A Q  + A+++ P+     VA    DL    E  G + + ++  ++A 
Sbjct: 1286 GIAYRSISEYGAACQEIEEAVRISPD-----VAAWYNDLGICYERRGWLHEAVQAFEKAI 1340

Query: 262  EIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDY 321
            E+ P   + L+   N      +H L  Q  + A+ + ++    +  Y+ +A      G +
Sbjct: 1341 ELQPGEPVYLSNAGNVLRQQRKHDLALQHLQKAIELDSNF---AEPYHQMALVMQDMGRF 1397

Query: 322  EKAGLYYMASVK-EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLK 380
            + A   +  S+    + P      +Y LG +    GD   A+    K ++I P+N E   
Sbjct: 1398 DDAYDLFQRSISLSPDNPRY----HYNLGILMRSQGDLHDAINQVSKAIDIQPNNAEWHS 1453

Query: 381  ALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLK 440
             L  +Y Q+G ++KA++   +A+++DP + +    L   +I+ +T     A  +AR  LK
Sbjct: 1454 TLADLYFQIGMLDKARKEAEEASRLDPDNYRYHRQLS--VIARETQDLDQALASARQALK 1511

Query: 441  KAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASML 500
             A +E   + +  +  +    GE  SA   +K A        +LD     Y     +   
Sbjct: 1512 CAPDEP--QAIAELASVQEALGELTSALALYKQA-------AMLDPLNADYHRKIGSIYR 1562

Query: 501  QFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIH-----------------DTVA 543
            Q    Q     ++    ++L  N    LF + +L  Q                   D   
Sbjct: 1563 QLGKTQ--ESLQSLQKAIDLAPNAPDSLFEIGQLYLQTDRFDEACKVLQKATQLAPDNPT 1620

Query: 544  ASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQL--SIELVNEALKVNGKYPNALSMLGD 601
                Y L + + ++  D  LR A +  + + +    +IE +  AL++   + +  + LG+
Sbjct: 1621 YRFHYGLAIMRLKEREDK-LRSARLLASSSQVSYAQAIEEIEAALRIEHNHADWHNTLGE 1679

Query: 602  LELKNDDWVKAKETFRAASDATDGKDSYATLSLGNW--------NYFAALRNEKRAPKLE 653
            L    DD+  A   FR A+D     DS   L   N         +Y  A+R  + A +L+
Sbjct: 1680 LYELVDDYESALHHFRWAADI----DSDCALFQYNQGRIYKKLRDYDRAIRAFQMAVRLD 1735

Query: 654  ATHLEKAKEL---------YTRVIVQHTSNLYAANGAGVVLAEKG----QFDVSKDLFTQ 700
                +   EL         ++  ++ +   L      G+ L   G    Q    KD  + 
Sbjct: 1736 PEFAQAYSELGATYNMVGNHSEALINYERALQIRPDDGLTLRRLGSTYRQMKRFKDAISI 1795

Query: 701  VQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLR----KFYYNTDAQILLYL 756
            +Q+AA   +  Q P+++  L   Y AQG    A+  +++ L+       YN +A I    
Sbjct: 1796 LQKAA--EIDPQDPEIYNELGLAYRAQGKHREALAEFEHALKLRPDNATYNRNAAI---- 1849

Query: 757  ARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQ 795
               H + +Q +   + L  A+ L P   T  F+ G  ++
Sbjct: 1850 --AHQDLKQTKLAIEKLQHAVMLEPYQPTWHFELGALLE 1886



 Score = 66.2 bits (160), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 76/315 (24%), Positives = 122/315 (38%), Gaps = 44/315 (13%)

Query: 105 EKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPA 164
           E++    LA   Y KA+ I   EP      G +L   G VE+A       +E D     A
Sbjct: 644 ERQGKLDLALANYQKATEIQPEEPLYHRNAGAILRKLGRVEEAERELVTAIELDSKYADA 703

Query: 165 LLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRAL 224
                 +  + G++  +LE +++A+Q  P  P    L +GL    L Q  KA  A Q AL
Sbjct: 704 YNELGSLYMDMGKHLAALENFQKAIQYSPEQP-EYYLQMGLTYRALKQPAKAITALQIAL 762

Query: 225 QLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQH 284
            +DP+++     LA    Q+     + + +E+ + A E+         YL N      + 
Sbjct: 763 SMDPKDLNKRAILAETYCQSGR---LTEAIEEYRWAIEL---SGGMPQYLLNAAIVQRKA 816

Query: 285 FLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFP 344
            ++E   E+   V  + P  + +Y+ L                                 
Sbjct: 817 GMLEDAEESLKKVIQNNPGLAPAYFEL--------------------------------- 843

Query: 345 YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAK 404
               G V  + GD+  AL  + K LE+ PDN   + A+       G + +A EL+R A  
Sbjct: 844 ----GMVAEQKGDYILALERYRKALELSPDNEHFIVAVSRSARLSGNLLQADELIRDAFS 899

Query: 405 IDPRDAQAFIDLGEL 419
             P  A    +LG +
Sbjct: 900 RMPESALIHDELGTI 914



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 96/439 (21%), Positives = 184/439 (41%), Gaps = 49/439 (11%)

Query: 17   VALDQLPRDASDILDILKAEQA---PLDLWLIIAREYFKQGKVEQFRQILEEGS--SPEI 71
            +AL  L R A  I  IL A QA     + +  + R +    + E+  Q  E+    +P +
Sbjct: 1219 LALIHLKRYAEAIDTILTAIQANPEAAEYYHALGRAHMGLSQYEEAVQAFEKAVRIAPSV 1278

Query: 72   DEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTW 131
             +Y+ D           LG+ Y  + +           +  A Q   +A RI     + +
Sbjct: 1279 AQYHRD-----------LGIAYRSISE-----------YGAACQEIEEAVRISPDVAAWY 1316

Query: 132  VGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSD-SLEFYKRALQ 190
               G     +G + +A  AF+  +E  +   P  L  A     + R  D +L+  ++A++
Sbjct: 1317 NDLGICYERRGWLHEAVQAFEKAIEL-QPGEPVYLSNAGNVLRQQRKHDLALQHLQKAIE 1375

Query: 191  VHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGI 250
            +  +        + L    +G+   A   FQR++ L P+N      L ++         +
Sbjct: 1376 LDSNFAEPYH-QMALVMQDMGRFDDAYDLFQRSISLSPDNPRYHYNLGIL---MRSQGDL 1431

Query: 251  RKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYN 310
               + ++ +A +I P  A   + LA+ +F  G   ++++  + A   +   P     +  
Sbjct: 1432 HDAINQVSKAIDIQPNNAEWHSTLADLYFQIG---MLDKARKEAEEASRLDPDNYRYHRQ 1488

Query: 311  LARSYHSKGDYEKAGLYYMASVKEINK--PHEFIFPYYGLGQVQLKLGDFRSALTNFEKV 368
            L+       D ++A    +AS ++  K  P E       L  VQ  LG+  SAL  +++ 
Sbjct: 1489 LSVIARETQDLDQA----LASARQALKCAPDE-PQAIAELASVQEALGELTSALALYKQA 1543

Query: 369  LEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAA 428
              + P N +  + +G IY QLG+ +++ + L+KA  + P    +  ++G+L + +D    
Sbjct: 1544 AMLDPLNADYHRKIGSIYRQLGKTQESLQSLQKAIDLAPNAPDSLFEIGQLYLQTDR--- 1600

Query: 429  LDAFKTARTLLKKAGEEVP 447
               F  A  +L+KA +  P
Sbjct: 1601 ---FDEACKVLQKATQLAP 1616



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 90/358 (25%), Positives = 145/358 (40%), Gaps = 49/358 (13%)

Query: 177  RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENV--EAL 234
            R+ D++   ++A ++ P  P  I   +GL     G+  +A   F+ AL+L P+N      
Sbjct: 1788 RFKDAISILQKAAEIDPQDP-EIYNELGLAYRAQGKHREALAEFEHALKLRPDNATYNRN 1846

Query: 235  VALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETA 294
             A+A  DL+  + A     +EK+Q A  + PY            F  G      +  E A
Sbjct: 1847 AAIAHQDLKQTKLA-----IEKLQHAVMLEPYQP-------TWHFELGALLEASEQYEEA 1894

Query: 295  LAVTNHG----PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQ 350
            LA  N      P  +   +  A      G  E+A      ++K   + +E+ F    LG 
Sbjct: 1895 LAEYNEAMQLNPDGAIYAFRAAEVCERMGKKEEAIECLKYALKLEPRNYEWRFK---LGC 1951

Query: 351  VQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP--- 407
            + L +  F  A     K LEI P++ E    LG   + L Q ++A E L  AAKI+P   
Sbjct: 1952 MYLDMEYFAPAAEELAKSLEIEPESAEAHLKLGIALINLEQYDQALERLMDAAKIEPNNF 2011

Query: 408  --------------RDAQAFIDLGELLISSDTGAALDAFKTARTL------LKKAGE--E 445
                          R  +A   + + L+   + A  D ++ A  L      L++A +  E
Sbjct: 2012 DVHEQLSLVMEKLGRPEEAISHIAQALLLDSSRA--DLYRRAGKLYADMDRLEEAAQALE 2069

Query: 446  VPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFK 503
              +E+  +    H E G    A +  K ALG+      LD K   Y + A++   Q +
Sbjct: 2070 KALELDPDDAETHSELGLIYEAQEKLKLALGEQKEAIRLDPKNPIYELRAASICRQLR 2127



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 83/350 (23%), Positives = 150/350 (42%), Gaps = 31/350 (8%)

Query: 135 GQLLLAKGEVEQASSAFKIVLEADRDNVP--ALLGQACVEFNRGRYSDSLEFYKRALQVH 192
           G++  A+G+ E A   +++ +E D  NV      G A    N  +Y  +    +  + + 
Sbjct: 503 GKIHEAEGKYELACQQYELAVERDPSNVNYRRSFGLALALCN--KYDLAAAKLREVVDIL 560

Query: 193 PSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRK 252
            S     +  +G      G+L +A + FQ A  + P +   L +L  +      A G  +
Sbjct: 561 KSDCALTQHELGNIYKIQGRLQQALEQFQDAATMSPSSAVYLTSLGSV----LAACGDDQ 616

Query: 253 GMEK-MQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH------GPTKS 305
           G E+ ++RA ++ P  A A N LA          ++E+  +  LA+ N+       P + 
Sbjct: 617 GAERELRRALDLDPNYAPAANELAA---------VLERQGKLDLALANYQKATEIQPEEP 667

Query: 306 HSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNF 365
             + N        G  E+A    + +++  +K   +   Y  LG + + +G   +AL NF
Sbjct: 668 LYHRNAGAILRKLGRVEEAERELVTAIELDSK---YADAYNELGSLYMDMGKHLAALENF 724

Query: 366 EKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDT 425
           +K ++  P+  E    +G  Y  L Q  KA   L+ A  +DP+D      L E    S  
Sbjct: 725 QKAIQYSPEQPEYYLQMGLTYRALKQPAKAITALQIALSMDPKDLNKRAILAETYCQS-- 782

Query: 426 GAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
           G   +A +  R  ++ +G  +P + L N  ++  + G  E A +S K  +
Sbjct: 783 GRLTEAIEEYRWAIELSG-GMP-QYLLNAAIVQRKAGMLEDAEESLKKVI 830



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 89/410 (21%), Positives = 157/410 (38%), Gaps = 74/410 (18%)

Query: 68   SPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHE 127
            SPE  +++A            LG  Y YL +++  +   EE           A R+D + 
Sbjct: 935  SPETSDFWAH-----------LGKAYRYLTRLDEAKEACEE-----------ALRLDANN 972

Query: 128  PSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKR 187
            P        LL+A  E E+A S F+     D  N    L         GR ++ L + ++
Sbjct: 973  PVAHHETAMLLIALNEEEEALSHFRKAARLDARNAQYALDLGACASKLGRVNEGLTWLEK 1032

Query: 188  ALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEA 247
            AL + P+  G     +G+     GQ  +A   F+ +L +D +NV+ L    +  L  +  
Sbjct: 1033 ALSLDPNN-GQAHAELGMLMGSRGQWEEALAHFRASLLIDEQNVDYLHMYGIACLHTDAT 1091

Query: 248  AGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHS 307
                K +E+           A+AL+                             P ++  
Sbjct: 1092 EDAIKTLER-----------ALALD-----------------------------PRRADV 1111

Query: 308  YYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY-YGLGQVQLKLGDFRSALTNFE 366
            Y   A +    G  ++A    + +++E  +  +    Y   LG +  + G+++ A     
Sbjct: 1112 YVTYAEALEIAGKRDEA----IQNLQEAVRLDDTNVSYKVKLGSMLRRYGEYQDAEDLLL 1167

Query: 367  KVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTG 426
            K  + +P++ +    LG +Y+ LG  EKA      A  +D R  +    +   LI     
Sbjct: 1168 KCTDDHPESAQAHSELGMLYMDLGLQEKALRHHEIACSLDDRSPEYKYRMALALIHLKRY 1227

Query: 427  A-ALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
            A A+D   TA     +A      E  + +G  H    ++E A Q+F+ A+
Sbjct: 1228 AEAIDTILTAIQANPEAA-----EYYHALGRAHMGLSQYEEAVQAFEKAV 1272



 Score = 49.3 bits (116), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 62/249 (24%), Positives = 116/249 (46%), Gaps = 14/249 (5%)

Query: 176  GRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV 235
            G +S++L  Y+RALQ+ P     +R  +G    ++ +   A    Q+A ++DP++ E   
Sbjct: 1753 GNHSEALINYERALQIRPDDGLTLR-RLGSTYRQMKRFKDAISILQKAAEIDPQDPEIYN 1811

Query: 236  ALAVMDLQANEAAGI-RKGMEKMQRAFEIYPYCAM-ALNYLANHFFFTGQHFLVEQLTET 293
             L +    A  A G  R+ + + + A ++ P  A    N    H         +E+L + 
Sbjct: 1812 ELGL----AYRAQGKHREALAEFEHALKLRPDNATYNRNAAIAHQDLKQTKLAIEKL-QH 1866

Query: 294  ALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQL 353
            A+ +  + PT    ++ L     +   YE+A   Y  ++ ++N P   I+ +    +V  
Sbjct: 1867 AVMLEPYQPT---WHFELGALLEASEQYEEALAEYNEAM-QLN-PDGAIYAFRA-AEVCE 1920

Query: 354  KLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAF 413
            ++G    A+   +  L++ P N E    LG +Y+ +     A E L K+ +I+P  A+A 
Sbjct: 1921 RMGKKEEAIECLKYALKLEPRNYEWRFKLGCMYLDMEYFAPAAEELAKSLEIEPESAEAH 1980

Query: 414  IDLGELLIS 422
            + LG  LI+
Sbjct: 1981 LKLGIALIN 1989



 Score = 47.4 bits (111), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 110/489 (22%), Positives = 197/489 (40%), Gaps = 74/489 (15%)

Query: 208 YKLGQLGKAR-------QAFQRALQLDPENVEAL----VALAVMDLQANEAAGIRKGMEK 256
           Y+LG++ +A        Q ++ A++ DP NV       +ALA+ +     AA +R+ ++ 
Sbjct: 500 YQLGKIHEAEGKYELACQQYELAVERDPSNVNYRRSFGLALALCNKYDLAAAKLREVVDI 559

Query: 257 MQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYH 316
           ++        CA+  + L N +   G+   ++Q  E         P+ +    +L     
Sbjct: 560 LKSD------CALTQHELGNIYKIQGR---LQQALEQFQDAATMSPSSAVYLTSLGSVLA 610

Query: 317 SKGDYEKAGLYYMASVKEINKPHEFIFPYYG-----LGQVQLKLGDFRSALTNFEKVLEI 371
           + GD + A        +E+ +  + + P Y      L  V  + G    AL N++K  EI
Sbjct: 611 ACGDDQGAE-------RELRRALD-LDPNYAPAANELAAVLERQGKLDLALANYQKATEI 662

Query: 372 YPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTG---AA 428
            P+     +  G I  +LG++E+A+  L  A ++D + A A+ +LG L +  D G   AA
Sbjct: 663 QPEEPLYHRNAGAILRKLGRVEEAERELVTAIELDSKYADAYNELGSLYM--DMGKHLAA 720

Query: 429 LDAFKTA------------------RTLLKKAGEEVPIEVLNNIGVIHFEKGEF--ESAH 468
           L+ F+ A                  R L + A     +++  ++      K     E+  
Sbjct: 721 LENFQKAIQYSPEQPEYYLQMGLTYRALKQPAKAITALQIALSMDPKDLNKRAILAETYC 780

Query: 469 QS--FKDALGDGIWLTLLDSKTKTYVIDAS-----ASMLQFKDMQLFHRFENDGNHVELP 521
           QS    +A+ +  W   L      Y+++A+     A ML+  +  L    +N+       
Sbjct: 781 QSGRLTEAIEEYRWAIELSGGMPQYLLNAAIVQRKAGMLEDAEESLKKVIQNNP------ 834

Query: 522 WNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIEL 581
                  F L  + EQ  D + A   YR  L    D     + ++  A+   NL  + EL
Sbjct: 835 -GLAPAYFELGMVAEQKGDYILALERYRKALELSPDNEHFIVAVSRSARLSGNLLQADEL 893

Query: 582 VNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWNYF 640
           + +A     +       LG +E    ++ KA E F +A   + +  D +A L    + Y 
Sbjct: 894 IRDAFSRMPESALIHDELGTIEFVRGNYQKASECFLKATKLSPETSDFWAHLGKA-YRYL 952

Query: 641 AALRNEKRA 649
             L   K A
Sbjct: 953 TRLDEAKEA 961



 Score = 43.5 bits (101), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 70/327 (21%), Positives = 129/327 (39%), Gaps = 48/327 (14%)

Query: 110  FILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQA 169
            F  A     KA+ ID  +P  +   G    A+G+  +A + F+  L+   DN       A
Sbjct: 1789 FKDAISILQKAAEIDPQDPEIYNELGLAYRAQGKHREALAEFEHALKLRPDNATYNRNAA 1848

Query: 170  CVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRAL----- 224
                +  +   ++E  + A+ + P  P           ++LG L +A + ++ AL     
Sbjct: 1849 IAHQDLKQTKLAIEKLQHAVMLEPYQP--------TWHFELGALLEASEQYEEALAEYNE 1900

Query: 225  --QLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYC------------AMA 270
              QL+P+            + A  AA + + M K + A E   Y              + 
Sbjct: 1901 AMQLNPDGA----------IYAFRAAEVCERMGKKEEAIECLKYALKLEPRNYEWRFKLG 1950

Query: 271  LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 330
              YL   +F      L + L           P  + ++  L  +  +   Y++A    M 
Sbjct: 1951 CMYLDMEYFAPAAEELAKSLEIE--------PESAEAHLKLGIALINLEQYDQALERLMD 2002

Query: 331  SVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLG 390
            + K   +P+ F   +  L  V  KLG    A+++  + L +     +  +  G +Y  + 
Sbjct: 2003 AAK--IEPNNFDV-HEQLSLVMEKLGRPEEAISHIAQALLLDSSRADLYRRAGKLYADMD 2059

Query: 391  QIEKAQELLRKAAKIDPRDAQAFIDLG 417
            ++E+A + L KA ++DP DA+   +LG
Sbjct: 2060 RLEEAAQALEKALELDPDDAETHSELG 2086



 Score = 42.0 bits (97), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 73/335 (21%), Positives = 141/335 (42%), Gaps = 34/335 (10%)

Query: 112  LATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACV 171
            LA +    A  ++ ++P+     G LL A  + E+A + +   ++ + D        A V
Sbjct: 1859 LAIEKLQHAVMLEPYQPTWHFELGALLEASEQYEEALAEYNEAMQLNPDGAIYAFRAAEV 1918

Query: 172  EFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENV 231
                G+  +++E  K AL++ P      R  +G     +     A +   ++L+++PE+ 
Sbjct: 1919 CERMGKKEEAIECLKYALKLEPRN-YEWRFKLGCMYLDMEYFAPAAEELAKSLEIEPESA 1977

Query: 232  EALVAL--AVMDLQA--------NEAAGIRKG-----------MEKMQRAFEIYPYCAMA 270
            EA + L  A+++L+          +AA I              MEK+ R  E   + A A
Sbjct: 1978 EAHLKLGIALINLEQYDQALERLMDAAKIEPNNFDVHEQLSLVMEKLGRPEEAISHIAQA 2037

Query: 271  L---NYLANHFFFTGQHFL-VEQLTETALAVTNH---GPTKSHSYYNLARSYHSKGDYEK 323
            L   +  A+ +   G+ +  +++L E A A+       P  + ++  L   Y ++   EK
Sbjct: 2038 LLLDSSRADLYRRAGKLYADMDRLEEAAQALEKALELDPDDAETHSELGLIYEAQ---EK 2094

Query: 324  AGLYYMASVKEIN-KPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKAL 382
              L      + I   P   I+       +  +L  F  A+   E+ L++ P+N       
Sbjct: 2095 LKLALGEQKEAIRLDPKNPIYELRA-ASICRQLRWFEEAMAALERSLDLDPENAAAYNER 2153

Query: 383  GHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 417
            G +Y  +G ++ A+E    A ++ P +A    +LG
Sbjct: 2154 GMLYEAMGNLDAAREQYEIAVRLQPDEALYHRNLG 2188


>gi|15606205|ref|NP_213582.1| hypothetical protein aq_854 [Aquifex aeolicus VF5]
 gi|2983399|gb|AAC06984.1| hypothetical protein aq_854 [Aquifex aeolicus VF5]
          Length = 545

 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 90/387 (23%), Positives = 162/387 (41%), Gaps = 41/387 (10%)

Query: 110 FILATQYYNKAS------------RIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEA 157
             LA +Y NK                D   P  +   G++ LAKG++++    F   LE 
Sbjct: 121 LFLANEYINKGKLREAEKVLLEYMETDPDNPLPYYLLGRIYLAKGDIQKGMEYFLKALEK 180

Query: 158 DRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKAR 217
            +   PA+L    +     ++ ++ E YK  L+ +P+ P  +   +       G++ +A 
Sbjct: 181 KKYYAPAVLSLGNLYLQEKKFKEAEELYKSVLEKYPNSPKILE-KLAKLYTASGRIEEAI 239

Query: 218 QAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANH 277
           + +++ + L P NV      A++ L   E    +K +E++       P  A A    A  
Sbjct: 240 KIYEKLINLKPRNVNYKTEYALLLLSTGEFDKAKKILEELYYVNPSNPNVAFA---YALT 296

Query: 278 FFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINK 337
              TG+    +++ E  L   N  P        L   Y   G+YE A        K + +
Sbjct: 297 LEATGELKKAKEIYENLL---NRFPENIKVIERLIGIYLDLGNYEDA--------KRLIE 345

Query: 338 PHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEI-------YPDNCETLKALGHIYVQLG 390
             + + P     ++     D+ S    ++K LEI       YP++         +Y  LG
Sbjct: 346 KAKVLAP--DKKEILFLEADYYSKTKQYDKALEILKKLEKDYPNDSRVYFMEAIVYDNLG 403

Query: 391 QIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP--I 448
            I+ A++ LRKA ++DP +   +  LG  L+        +  + A  L+KKA E+ P   
Sbjct: 404 DIKNAEKALRKAIELDPENPDYYNYLGYSLL---LWYGKERVEEAEELIKKALEKDPENP 460

Query: 449 EVLNNIGVIHFEKGEFESAHQSFKDAL 475
             ++++G +++ KG++E A Q    AL
Sbjct: 461 AYIDSMGWVYYLKGDYERAMQYLLKAL 487



 Score = 65.5 bits (158), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 52/209 (24%), Positives = 99/209 (47%), Gaps = 9/209 (4%)

Query: 215 KARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYL 274
           KA++  +  L+  P+  +A + L  +     E    +K  E ++ A++ +P+    + +L
Sbjct: 67  KAKELAKEFLETYPDEPQAYIYLYTIYKFLKED---KKAFEVIKEAYKSFPFNENVVLFL 123

Query: 275 ANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKE 334
           AN +   G+   + +  +  L      P     YY L R Y +KGD +K   Y++   K 
Sbjct: 124 ANEYINKGK---LREAEKVLLEYMETDPDNPLPYYLLGRIYLAKGDIQKGMEYFL---KA 177

Query: 335 INKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK 394
           + K   +      LG + L+   F+ A   ++ VLE YP++ + L+ L  +Y   G+IE+
Sbjct: 178 LEKKKYYAPAVLSLGNLYLQEKKFKEAEELYKSVLEKYPNSPKILEKLAKLYTASGRIEE 237

Query: 395 AQELLRKAAKIDPRDAQAFIDLGELLISS 423
           A ++  K   + PR+     +   LL+S+
Sbjct: 238 AIKIYEKLINLKPRNVNYKTEYALLLLST 266


>gi|116753411|ref|YP_842529.1| TPR repeat-containing protein [Methanosaeta thermophila PT]
 gi|116664862|gb|ABK13889.1| Tetratricopeptide TPR_2 repeat protein [Methanosaeta thermophila
           PT]
          Length = 366

 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 81/327 (24%), Positives = 130/327 (39%), Gaps = 57/327 (17%)

Query: 142 GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 201
           G  ++A   +  VL+ D  N  A  G+    F   RY D+LE Y RA++  P C  A   
Sbjct: 18  GSYDEAIEYYDRVLDIDPMNTAAWCGRGMACFCFSRYEDALECYSRAIEADPECVPAWE- 76

Query: 202 GIGLCR----YKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIR-KGM-- 254
               CR    + LG+  +A  ++Q A+  DP    A +   + D + ++A   R KG+  
Sbjct: 77  ----CRAEVLFILGRCDEAISSYQEAIDRDPAYALAWIERCI-DSRPDDAESWRQKGLAL 131

Query: 255 ----------EKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTK 304
                     E  + A +I P  A     L       G+H    +  E AL ++   P+ 
Sbjct: 132 LSMGRYEEAIEAYRMALDIDPSQARDWCILGESLQTIGRHSEALECFERALELS---PSD 188

Query: 305 SHSYYNLARSYHSKGDYEKA---------------------GLYYMA------SVKEINK 337
           S  +  +  S HS G Y++A                     G+ Y A      ++  I+ 
Sbjct: 189 SACWIRMGESMHSTGRYDEALECYEEALRLDPGSVQAWHGKGITYRAMGIPSKAIDAIDS 248

Query: 338 P----HEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIE 393
                 E    +Y  G     +G +  AL  F++VL I P N   LK+       LG+  
Sbjct: 249 ALTLDPEHAQSWYAKGITFRAMGLYEDALECFDRVLRIDPGNASALKSRAWSLYNLGRYA 308

Query: 394 KAQELLRKAAKIDPRDAQAFIDLGELL 420
           +A      A  ++P D  A+ ++G +L
Sbjct: 309 EALSACEGAISVNPLDEDAWYNMGIVL 335


>gi|118385554|ref|XP_001025906.1| TPR Domain containing protein [Tetrahymena thermophila]
 gi|89307673|gb|EAS05661.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
          Length = 1032

 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 94/405 (23%), Positives = 182/405 (44%), Gaps = 64/405 (15%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEAD-RDNVPAL-LGQAC 170
           A + Y K+  I+  +   + G G     KG V++A  +++  LE + +D++    LG A 
Sbjct: 493 AIKSYQKSIEINPKDDDYYNGLGSAYKEKGLVDEAIKSYQKCLEINPKDDIYNYNLGNAY 552

Query: 171 VEFNRGRYSDSLEFYKRALQVHP---SCPGAIRLGIGLCRYKL-GQLGKARQAFQRALQL 226
            +  +G   ++++ Y+++++++P   SC     LGI    YKL G L +A +++Q+ L++
Sbjct: 553 DD--KGLLDEAIKSYQKSIEINPKNDSC--YYNLGIA---YKLKGLLDEAIKSYQKCLEI 605

Query: 227 DPENVEALVALAV------------------MDLQANE------------AAGI-RKGME 255
           +P+N      L +                  +++  N+            A G+  + ++
Sbjct: 606 NPKNDSCYYNLGIAYKEKGLLDEAIKSYQKSIEINPNDDDYYKGLGNAYKAKGLLDQAIK 665

Query: 256 KMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSY 315
             Q+  EI P   +    L N +   G   L+++  ++        P     YY+L  +Y
Sbjct: 666 SYQKCLEINPNNDICYYNLGNTYKEIG---LLDETIKSYQKSIEINPKDDDYYYSLGSAY 722

Query: 316 HSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDN 375
             KG  ++A   Y   + EIN P + I  YY LG+     G    A+T+++K +EI P +
Sbjct: 723 DDKGLLDEAIKSYQKCL-EIN-PKDDIC-YYNLGKAYKSKGLLDEAITSYQKSIEINPKD 779

Query: 376 CETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTA 435
            +   +LG  Y   G +++A +  +   +I+P D   + +LG      + G   +A ++ 
Sbjct: 780 DDCYNSLGSAYDDKGLLDEAIQSYQNCLEINPMDDSCYYNLGNTY--KEKGLLDEAIRSY 837

Query: 436 RTLLKKAGEEVPIEVLN-----NIGVIHFEKGEFESAHQSFKDAL 475
           +       E + I   N     N+G+    KG  + A QS++  L
Sbjct: 838 Q-------ESIEINPENDSCYYNLGIACKSKGLLDKAIQSYQKCL 875



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 82/373 (21%), Positives = 168/373 (45%), Gaps = 32/373 (8%)

Query: 56   VEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQ 115
            ++ +++ LE   + +I  Y     Y+ I +L+      +Y   IE   ++ + ++ L + 
Sbjct: 664  IKSYQKCLEINPNNDICYYNLGNTYKEIGLLDE--TIKSYQKSIEINPKDDDYYYSLGSA 721

Query: 116  Y------------YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEAD--RDN 161
            Y            Y K   I+  +   +   G+   +KG +++A ++++  +E +   D+
Sbjct: 722  YDDKGLLDEAIKSYQKCLEINPKDDICYYNLGKAYKSKGLLDEAITSYQKSIEINPKDDD 781

Query: 162  VPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQ 221
                LG A  +  +G   ++++ Y+  L+++P    +    +G    + G L +A +++Q
Sbjct: 782  CYNSLGSAYDD--KGLLDEAIQSYQNCLEINPM-DDSCYYNLGNTYKEKGLLDEAIRSYQ 838

Query: 222  RALQLDPENVEALVALAVMDLQANEAAGI-RKGMEKMQRAFEIYPYCAMALNYLANHFFF 280
             +++++PEN      L +    A ++ G+  K ++  Q+  EI+P        L   +  
Sbjct: 839  ESIEINPENDSCYYNLGI----ACKSKGLLDKAIQSYQKCLEIHPKNDSCYYNLGKAYKS 894

Query: 281  TGQHFLVEQLTETALAVTNHGPTKSHSYYN-LARSYHSKGDYEKAGLYYMASVKEINKPH 339
             G   LV++  ++  +     P K  +YYN L  +Y  KG  ++A   Y   +K IN  +
Sbjct: 895  KG---LVDEAIKSYQSSIEINP-KVDAYYNSLGNAYKVKGLLDEAIKSYQNCLK-INPNY 949

Query: 340  EFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELL 399
                 YY LGQ     G    A+ +++K LEI P N      LG  Y   G +++A +  
Sbjct: 950  NSC--YYKLGQAYKSKGLLDEAIKSYQKYLEINPKNDSCYYNLGLAYKSKGLLDEAIKSY 1007

Query: 400  RKAAKIDPRDAQA 412
            +K   ++P +   
Sbjct: 1008 QKCLSLNPNNKNC 1020



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 78/351 (22%), Positives = 154/351 (43%), Gaps = 27/351 (7%)

Query: 81  ERIAILNALGVYYTYLGKIETKQREKE--EHFI---------LATQYYNKASRIDMHEPS 129
           +R +ILN L  +     +I T     +  EHF+         L+ Q+ N   +I     +
Sbjct: 280 QRPSILNILDFFEDMRKQIWTSDDSADLYEHFLEKMKDSQWYLSYQFINICCQIQQKNET 339

Query: 130 TWVGKGQLLLAKGEVEQASSAFKIVLEAD-RDNVPAL-LGQACVEFNRGRYSDSLEFYKR 187
            W   G        + +A  +++  LE + +D++    LG+A  E  +    ++++ Y++
Sbjct: 340 YWFYLGYTQHQLNFLSEAIKSYQKCLEINPKDDICYYNLGKAYKE--KDLLDEAIKSYQK 397

Query: 188 ALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEA 247
           +++++P        G+G        L +A +++Q+ L+++P+N      L      A + 
Sbjct: 398 SIEINPKDDDYYN-GLGSAYRAKSLLDEAIKSYQKCLEINPKNDSCFYNLG----NAYDD 452

Query: 248 AG-IRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSH 306
            G + + ++  Q+  EI P   +    L N     G   L+++  ++        P    
Sbjct: 453 KGLLDEAIKSYQKCLEINPKDDICYYNLGNTQKEKG---LLDEAIKSYQKSIEINPKDDD 509

Query: 307 SYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFE 366
            Y  L  +Y  KG  ++A   Y   + EIN P + I+  Y LG      G    A+ +++
Sbjct: 510 YYNGLGSAYKEKGLVDEAIKSYQKCL-EIN-PKDDIYN-YNLGNAYDDKGLLDEAIKSYQ 566

Query: 367 KVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 417
           K +EI P N      LG  Y   G +++A +  +K  +I+P++   + +LG
Sbjct: 567 KSIEINPKNDSCYYNLGIAYKLKGLLDEAIKSYQKCLEINPKNDSCYYNLG 617



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 55/206 (26%), Positives = 98/206 (47%), Gaps = 17/206 (8%)

Query: 277 HFFFTG--QH---FLVEQLT--ETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYM 329
           ++F+ G  QH   FL E +   +  L +    P     YYNL ++Y  K   ++A   Y 
Sbjct: 340 YWFYLGYTQHQLNFLSEAIKSYQKCLEIN---PKDDICYYNLGKAYKEKDLLDEAIKSYQ 396

Query: 330 ASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQL 389
            S+ EIN P +  + Y GLG           A+ +++K LEI P N      LG+ Y   
Sbjct: 397 KSI-EIN-PKDDDY-YNGLGSAYRAKSLLDEAIKSYQKCLEINPKNDSCFYNLGNAYDDK 453

Query: 390 GQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIE 449
           G +++A +  +K  +I+P+D   + +LG      + G   +A K+ +  ++   ++   +
Sbjct: 454 GLLDEAIKSYQKCLEINPKDDICYYNLGN--TQKEKGLLDEAIKSYQKSIEINPKDD--D 509

Query: 450 VLNNIGVIHFEKGEFESAHQSFKDAL 475
             N +G  + EKG  + A +S++  L
Sbjct: 510 YYNGLGSAYKEKGLVDEAIKSYQKCL 535


>gi|224532842|ref|ZP_03673457.1| TPR domain protein [Borrelia burgdorferi WI91-23]
 gi|224512231|gb|EEF82617.1| TPR domain protein [Borrelia burgdorferi WI91-23]
          Length = 379

 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 75/318 (23%), Positives = 135/318 (42%), Gaps = 14/318 (4%)

Query: 123 IDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSL 182
           +D+ E S    +G  L+ +  + +A S F  +LE D +N  AL+G   +E  +  Y  ++
Sbjct: 22  LDVTEKSK---RGYQLIKEERLSEAESLFSDILEKDNENNYALVGLGDIERKKNNYDKAI 78

Query: 183 EFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDL 242
            +Y++ L  HPS   A+  G+G C   L    KA   ++  L+ DPEN+  L  +A    
Sbjct: 79  VYYQKCLVKHPSNNYAL-FGLGDCYRNLDNYKKATDIWEEYLKYDPENITVLTRVAA--- 134

Query: 243 QANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGP 302
              +    +K  +   +  E+ P    AL  +  H ++  + +         +   N   
Sbjct: 135 SYRKLKNFQKSKQTYLKVMELMPDNDYALVGIG-HLYYDFKEYKEALKYWLKMYELNQSK 193

Query: 303 TKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSAL 362
                  ++   Y    ++ + G+Y+     EI+ P  F +  +GL        +++ AL
Sbjct: 194 VDVRVLTSIGNCYRKLREFTR-GIYFFKKALEIS-PSNF-YAVFGLADCYRGNKEYKEAL 250

Query: 363 TNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS 422
             +  ++E  P N   L  +G  Y  L   E +Q   +KA  +   D   F  LG  LI 
Sbjct: 251 KYWIDIIEKDPKNNLVLTRVGDAYRYLNDYENSQIYYKKALDV---DFDMFAILGLALIQ 307

Query: 423 SDTGAALDAFKTARTLLK 440
            + G   +A    ++L+K
Sbjct: 308 KEQGKYEEALIAIKSLIK 325


>gi|216264688|ref|ZP_03436680.1| TPR domain protein [Borrelia burgdorferi 156a]
 gi|221217520|ref|ZP_03588990.1| TPR domain protein [Borrelia burgdorferi 72a]
 gi|225549782|ref|ZP_03770746.1| TPR domain protein [Borrelia burgdorferi 118a]
 gi|226320896|ref|ZP_03796447.1| TPR domain protein [Borrelia burgdorferi 29805]
 gi|215981161|gb|EEC21968.1| TPR domain protein [Borrelia burgdorferi 156a]
 gi|221192583|gb|EEE18800.1| TPR domain protein [Borrelia burgdorferi 72a]
 gi|225369590|gb|EEG99039.1| TPR domain protein [Borrelia burgdorferi 118a]
 gi|226233668|gb|EEH32398.1| TPR domain protein [Borrelia burgdorferi 29805]
          Length = 379

 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 75/318 (23%), Positives = 135/318 (42%), Gaps = 14/318 (4%)

Query: 123 IDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSL 182
           +D+ E S    +G  L+ +  + +A S F  +LE D +N  AL+G   +E  +  Y  ++
Sbjct: 22  LDVTEKSK---RGYQLIKEERLSEAESLFSDILEKDNENNYALVGLGDIERKKNNYDKAI 78

Query: 183 EFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDL 242
            +Y++ L  HPS   A+  G+G C   L    KA   ++  L+ DPEN+  L  +A    
Sbjct: 79  VYYQKCLVKHPSNNYAL-FGLGDCYRNLDNYKKATDIWEEYLKYDPENITVLTRVAA--- 134

Query: 243 QANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGP 302
              +    +K  +   +  E+ P    AL  +  H ++  + +         +   N   
Sbjct: 135 SYRKLKNFQKSKQTYLKVMELMPDNDYALVGIG-HLYYDFKEYKEALKYWLKMYELNQSK 193

Query: 303 TKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSAL 362
                  ++   Y    ++ + G+Y+     EI+ P  F +  +GL        +++ AL
Sbjct: 194 VDVRVLTSIGNCYRKLREFTR-GIYFFKKALEIS-PSNF-YAVFGLADCYRGNKEYKEAL 250

Query: 363 TNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS 422
             +  ++E  P N   L  +G  Y  L   E +Q   +KA  +   D   F  LG  LI 
Sbjct: 251 KYWLDIIEKDPKNNLVLTRVGDAYRYLNDYENSQIYYKKALDV---DFDMFAILGLALIQ 307

Query: 423 SDTGAALDAFKTARTLLK 440
            + G   +A    ++L+K
Sbjct: 308 KEQGKYEEALIAIKSLIK 325



 Score = 40.0 bits (92), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 50/99 (50%), Gaps = 2/99 (2%)

Query: 142 GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 201
            + E +   +K  L+ D D + A+LG A ++  +G+Y ++L   K  ++ +P    A+ +
Sbjct: 278 NDYENSQIYYKKALDVDFD-MFAILGLALIQKEQGKYEEALIAIKSLIKNNPK-NSALYV 335

Query: 202 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVM 240
               C   LGQ+G A       LQL  +N+  +  LAV+
Sbjct: 336 NAAECYEALGQIGNAVDILSSFLQLGMKNIVVIDYLAVL 374


>gi|224534068|ref|ZP_03674651.1| TPR domain protein [Borrelia burgdorferi CA-11.2a]
 gi|225548538|ref|ZP_03769586.1| TPR domain protein [Borrelia burgdorferi 94a]
 gi|387827111|ref|YP_005806393.1| TPR domain-containing protein [Borrelia burgdorferi N40]
 gi|224512767|gb|EEF83135.1| TPR domain protein [Borrelia burgdorferi CA-11.2a]
 gi|225370801|gb|EEH00236.1| TPR domain protein [Borrelia burgdorferi 94a]
 gi|312149253|gb|ADQ29324.1| TPR domain protein [Borrelia burgdorferi N40]
          Length = 379

 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 75/318 (23%), Positives = 135/318 (42%), Gaps = 14/318 (4%)

Query: 123 IDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSL 182
           +D+ E S    +G  L+ +  + +A S F  +LE D +N  AL+G   +E  +  Y  ++
Sbjct: 22  LDVTEKSK---RGYQLIKEERLSEAESLFSDILEKDNENNYALVGLGDIERKKNNYDKAI 78

Query: 183 EFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDL 242
            +Y++ L  HPS   A+  G+G C   L    KA   ++  L+ DPEN+  L  +A    
Sbjct: 79  VYYQKCLVKHPSNNYAL-FGLGDCYRNLDNYKKATDIWEEYLKYDPENITVLTRVAA--- 134

Query: 243 QANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGP 302
              +    +K  +   +  E+ P    AL  +  H ++  + +         +   N   
Sbjct: 135 SYRKLKNFQKSKQTYLKVMELMPDNDYALVGIG-HLYYDFKEYKEALKYWLKMYELNQSK 193

Query: 303 TKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSAL 362
                  ++   Y    ++ + G+Y+     EI+ P  F +  +GL        +++ AL
Sbjct: 194 VDVRVLTSIGNCYRKLREFTR-GIYFFKKALEIS-PSNF-YAVFGLADCYRGNKEYKEAL 250

Query: 363 TNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS 422
             +  ++E  P N   L  +G  Y  L   E +Q   +KA  +   D   F  LG  LI 
Sbjct: 251 KYWLDIIEKDPKNNLVLTRVGDAYRYLNDYENSQIYYKKALDV---DFDMFAILGLALIQ 307

Query: 423 SDTGAALDAFKTARTLLK 440
            + G   +A    ++L+K
Sbjct: 308 KEQGKYEEALIAIKSLIK 325


>gi|118362625|ref|XP_001014539.1| TPR Domain containing protein [Tetrahymena thermophila]
 gi|89296306|gb|EAR94294.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
          Length = 606

 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 106/495 (21%), Positives = 217/495 (43%), Gaps = 37/495 (7%)

Query: 143 EVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLG 202
           +++Q   AF  +L+ +  +         V    G++ ++   +  AL+++P    A   G
Sbjct: 25  KLKQKEQAFVKILQTNPQSYQTYEELGNVYLEMGQFENAKNSFYSALEINPQSARA-YCG 83

Query: 203 IGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFE 262
           +G+   +   + ++ Q FQ++L+L+P++   L  L ++    ++   I + +   ++A E
Sbjct: 84  LGIICSEQNMIKESEQYFQKSLELNPKSAITLSNLGIL---YDKCVTIDQRIFCYKQAIE 140

Query: 263 IYP-----YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHS 317
             P     Y  + L YL    +   +     QL +  L V    P   ++++NLA  Y S
Sbjct: 141 SDPSIHQSYNGLGLAYLDKQMYGNAK-----QLFQKCLEVN---PQNINAHFNLATIYRS 192

Query: 318 KGDYEKAGLYYMASVKEINKPHEFIFP-YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNC 376
           + +Y+   +  + +  +I   ++  F  YY LG+   +LG    A+   +K +EI P   
Sbjct: 193 ENNYQDC-INCLETCLKIYPQNDAPFSIYYNLGEAYQQLGMMEEAIKYLKKTIEIQPQQY 251

Query: 377 ETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTAR 436
                +G IY Q+  +E++ +    A KI+P  A+   +LG  LI+ + G   +A +  +
Sbjct: 252 LLHDKIGDIYFQMDNLEESLKHFETALKINPESARTLANLG--LININLGNYQEAQQQLQ 309

Query: 437 TLLKK-AGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL---GDGIWLTLLDSKTKTY- 491
             L+   G ++    L   G +H ++G F+ A Q+++       +   L  L+    TY 
Sbjct: 310 YALQLDPGAQICYHYL---GYLHLQQGRFDEAQQNYESYFEINPEDDNLNALEHLGITYM 366

Query: 492 --VIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYR 549
             +I      L  K   L+ +       +++  N VT+L NL  +   +     A    +
Sbjct: 367 NQIIFKGKRDLLDKTRDLYEKL------LKIEPNSVTILLNLGSIYYNLGQLEQAIKYNQ 420

Query: 550 LILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDW 609
           + L    +Y  A      I   +   + +I+   ++ + N K  +A+  LG +  +N + 
Sbjct: 421 MALQIDPNYDQANFNQGIIYHQKGMAEKAIKYFQKSFQSNSKSSDAIYNLGIIYGQNGNL 480

Query: 610 VKAKETFRAASDATD 624
            +A+   + A  A +
Sbjct: 481 QEAEYFNKLALQANN 495



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 84/368 (22%), Positives = 155/368 (42%), Gaps = 20/368 (5%)

Query: 117 YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 176
           Y +A   D     ++ G G   L K     A   F+  LE +  N+ A    A +  +  
Sbjct: 135 YKQAIESDPSIHQSYNGLGLAYLDKQMYGNAKQLFQKCLEVNPQNINAHFNLATIYRSEN 194

Query: 177 RYSDSLEFYKRALQVHP--SCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEAL 234
            Y D +   +  L+++P    P +I   +G    +LG + +A +  ++ +++ P+  + L
Sbjct: 195 NYQDCINCLETCLKIYPQNDAPFSIYYNLGEAYQQLGMMEEAIKYLKKTIEIQPQ--QYL 252

Query: 235 VALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETA 294
           +   + D+   +   + + ++  + A +I P  A  L  L       G +   ++  +  
Sbjct: 253 LHDKIGDIYF-QMDNLEESLKHFETALKINPESARTLANLGLININLGNY---QEAQQQL 308

Query: 295 LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQV--- 351
                  P     Y+ L   +  +G +++A   Y  S  EIN   + +     LG     
Sbjct: 309 QYALQLDPGAQICYHYLGYLHLQQGRFDEAQQNY-ESYFEINPEDDNLNALEHLGITYMN 367

Query: 352 QLKLGDFRSALTN----FEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 407
           Q+     R  L      +EK+L+I P++   L  LG IY  LGQ+E+A +  + A +IDP
Sbjct: 368 QIIFKGKRDLLDKTRDLYEKLLKIEPNSVTILLNLGSIYYNLGQLEQAIKYNQMALQIDP 427

Query: 408 RDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESA 467
              QA  + G  +I    G A  A K  +   +   +    + + N+G+I+ + G  + A
Sbjct: 428 NYDQANFNQG--IIYHQKGMAEKAIKYFQKSFQSNSKSS--DAIYNLGIIYGQNGNLQEA 483

Query: 468 HQSFKDAL 475
               K AL
Sbjct: 484 EYFNKLAL 491


>gi|15594540|ref|NP_212329.1| cell division control protein 27 [Borrelia burgdorferi B31]
 gi|218249485|ref|YP_002374723.1| hypothetical protein BbuZS7_0195 [Borrelia burgdorferi ZS7]
 gi|223889253|ref|ZP_03623841.1| TPR domain protein [Borrelia burgdorferi 64b]
 gi|226321513|ref|ZP_03797039.1| TPR domain protein [Borrelia burgdorferi Bol26]
 gi|387825849|ref|YP_005805302.1| TPR domain-containing protein [Borrelia burgdorferi JD1]
 gi|2688072|gb|AAC66569.1| TPR domain protein [Borrelia burgdorferi B31]
 gi|218164673|gb|ACK74734.1| TPR domain protein [Borrelia burgdorferi ZS7]
 gi|223885286|gb|EEF56388.1| TPR domain protein [Borrelia burgdorferi 64b]
 gi|226232702|gb|EEH31455.1| TPR domain protein [Borrelia burgdorferi Bol26]
 gi|312147863|gb|ADQ30522.1| TPR domain protein [Borrelia burgdorferi JD1]
          Length = 379

 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 75/318 (23%), Positives = 135/318 (42%), Gaps = 14/318 (4%)

Query: 123 IDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSL 182
           +D+ E S    +G  L+ +  + +A S F  +LE D +N  AL+G   +E  +  Y  ++
Sbjct: 22  LDVTEKSK---RGYQLIKEERLSEAESLFSDILEKDNENNYALVGLGDIERKKNNYDKAI 78

Query: 183 EFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDL 242
            +Y++ L  HPS   A+  G+G C   L    KA   ++  L+ DPEN+  L  +A    
Sbjct: 79  VYYQKCLVKHPSNNYAL-FGLGDCYRNLDNYKKATDIWEEYLKYDPENITVLTRVAA--- 134

Query: 243 QANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGP 302
              +    +K  +   +  E+ P    AL  +  H ++  + +         +   N   
Sbjct: 135 SYRKLKNFQKSKQTYLKVMELIPDNDYALVGIG-HLYYDFKEYKEALKYWLKMYELNQSK 193

Query: 303 TKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSAL 362
                  ++   Y    ++ + G+Y+     EI+ P  F +  +GL        +++ AL
Sbjct: 194 VDVRVLTSIGNCYRKLREFTR-GIYFFKKALEIS-PSNF-YAVFGLADCYRGNKEYKEAL 250

Query: 363 TNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS 422
             +  ++E  P N   L  +G  Y  L   E +Q   +KA  +   D   F  LG  LI 
Sbjct: 251 KYWLDIIEKDPKNNLVLTRVGDAYRYLNDYENSQIYYKKALDV---DFDMFAILGLALIQ 307

Query: 423 SDTGAALDAFKTARTLLK 440
            + G   +A    ++L+K
Sbjct: 308 KEQGKYEEALIAIKSLIK 325



 Score = 40.4 bits (93), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 50/99 (50%), Gaps = 2/99 (2%)

Query: 142 GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 201
            + E +   +K  L+ D D + A+LG A ++  +G+Y ++L   K  ++ +P    A+ +
Sbjct: 278 NDYENSQIYYKKALDVDFD-MFAILGLALIQKEQGKYEEALIAIKSLIKNNPK-NSALYV 335

Query: 202 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVM 240
               C   LGQ+G A       LQL  +N+  +  LAV+
Sbjct: 336 NAAECYEALGQIGNAVDILSSFLQLGMKNIVVIDYLAVL 374


>gi|72382794|ref|YP_292149.1| TPR repeat-containing protein [Prochlorococcus marinus str. NATL2A]
 gi|72002644|gb|AAZ58446.1| TPR repeat [Prochlorococcus marinus str. NATL2A]
          Length = 637

 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 85/336 (25%), Positives = 153/336 (45%), Gaps = 23/336 (6%)

Query: 285 FLVEQLTETALAVTNHGPTKS--HSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFI 342
           F +E++ E     TN  P+K       N A  +HS+G+  +A  YY   + +    H  I
Sbjct: 24  FALEEIKENISIFTN-TPSKPSKEEIINQAFKFHSQGNISEAAKYYQYLINQGFNDHR-I 81

Query: 343 FPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKA 402
           F  YG+  +   LG  + A  + +K +EI PD  E    LG+I   L ++++A+  LRKA
Sbjct: 82  FSNYGI--ILKSLGKLKEAELSTQKAIEIKPDFAEMHSNLGNILRDLDKLKEAEISLRKA 139

Query: 403 AKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFE 460
            +I P  A+A+ +LG +L        L   K A    +KA E  P   +   N+G +  +
Sbjct: 140 IEIKPNYAEAYYNLGNIL------KDLGKLKEAEISYRKAIEIKPDYAKAHYNLGNLLKD 193

Query: 461 KGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVEL 520
            G+ + A  S+  A+G    +    +K  + + +    +   ++ ++ +R       +EL
Sbjct: 194 NGKLKEAELSYLKAIG----IKPDYAKAHSNLGNLLRELGNLQEAEMSYR-----KAIEL 244

Query: 521 PWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIE 580
                   +NL  LL+++ +   A + YR  +    DY +A+  L  + +   NLQ +  
Sbjct: 245 NPTFAEAHYNLGNLLKELGNLQEAEMSYRKAIEIKPDYAEAHSNLGNLLRELGNLQEAEM 304

Query: 581 LVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF 616
              +A+++   Y  A   L  +EL   D++   E +
Sbjct: 305 SYRKAIEIKPDYAEAFWNLSLVELLQGDYINGLENY 340



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 60/233 (25%), Positives = 112/233 (48%), Gaps = 14/233 (6%)

Query: 186 KRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA--VMDLQ 243
           ++A+++ P     +   +G     L +L +A  + ++A+++ P   EA   L   + DL 
Sbjct: 103 QKAIEIKPDF-AEMHSNLGNILRDLDKLKEAEISLRKAIEIKPNYAEAYYNLGNILKDLG 161

Query: 244 ANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPT 303
             + A I       ++A EI P  A A   L N     G+   +++   + L      P 
Sbjct: 162 KLKEAEI-----SYRKAIEIKPDYAKAHYNLGNLLKDNGK---LKEAELSYLKAIGIKPD 213

Query: 304 KSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALT 363
            + ++ NL       G+ ++A + Y  ++ E+N    F   +Y LG +  +LG+ + A  
Sbjct: 214 YAKAHSNLGNLLRELGNLQEAEMSYRKAI-ELNPT--FAEAHYNLGNLLKELGNLQEAEM 270

Query: 364 NFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDL 416
           ++ K +EI PD  E    LG++  +LG +++A+   RKA +I P  A+AF +L
Sbjct: 271 SYRKAIEIKPDYAEAHSNLGNLLRELGNLQEAEMSYRKAIEIKPDYAEAFWNL 323


>gi|345869875|ref|ZP_08821831.1| Tetratricopeptide TPR_1 repeat-containing protein [Thiorhodococcus
           drewsii AZ1]
 gi|343922737|gb|EGV33436.1| Tetratricopeptide TPR_1 repeat-containing protein [Thiorhodococcus
           drewsii AZ1]
          Length = 1054

 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 95/394 (24%), Positives = 170/394 (43%), Gaps = 28/394 (7%)

Query: 81  ERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLA 140
           ER+   + L V + +      ++ E         Q Y +A  I       W G G LL  
Sbjct: 583 ERLGTSDQLAVAWMFHANQHPEESE---------QAYRRAIEIAPDYAYPWYGLGNLLTQ 633

Query: 141 K-GEVEQASSAFKIVLEADRDNVPALLGQACVEFNR-GRYSDSLEFYKRALQVHPSCPGA 198
                ++A  AF+  +E + +      G   +  N   RY ++ + Y+RA+++ P+    
Sbjct: 634 HLARYDEAEQAFRRAIEIEPNFAYPWYGLGNLLTNHLARYDEAEQAYRRAIEIDPNFADP 693

Query: 199 IRLGIG-LCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKM 257
              G+G L +  L +  +A QA++RA+++DP N      L  + +Q    A   +  +  
Sbjct: 694 W-YGLGNLLKNHLARYDEAEQAYRRAIEIDPNNAPPWNGLGNLLIQ--HLARYDEAEQAY 750

Query: 258 QRAFEIYPYCAMALNYLANHF-FFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYH 316
           +RA EI P  A   N L N       ++   EQ    A+ +    P  +  +Y L     
Sbjct: 751 RRAIEIDPNNAAPWNGLGNLLKNHLARYDEAEQAYRRAIEID---PNNAPPWYGLGNLLQ 807

Query: 317 SK-GDYEKAGLYYMASVKEINKPHEFIFPYYGLGQ-VQLKLGDFRSALTNFEKVLEIYPD 374
                Y++A   Y  S+ EI+   +F  P+ GLG  +Q  L  +  A   F + +EI PD
Sbjct: 808 DHFAHYDEAEQAYRCSI-EIDP--DFAHPWNGLGNLLQDHLARYDEAEQAFRRAIEIDPD 864

Query: 375 NCETLKALGHIYV-QLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFK 433
                  LG++    L + ++A++  R+A +IDP D  AF +     +       L+A +
Sbjct: 865 FAHPWNGLGNLLKNHLARYDEAEQAYRRAIEIDP-DEPAFSNALAWFLYQQDRDLLEARR 923

Query: 434 TARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESA 467
            A   ++ A E+  +  ++ +  I    G++ +A
Sbjct: 924 RAERAIELAPED--LYSIHTLATILVSLGDWPAA 955



 Score = 46.6 bits (109), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 37/142 (26%), Positives = 68/142 (47%), Gaps = 14/142 (9%)

Query: 341 FIFPYYGLGQVQLK-LGDFRSALTNFEKVLEIYPDNCETLKALGHIYV-QLGQIEKAQEL 398
           F +P+YGLG +    L  +  A   + + +EI P+  +    LG++    L + ++A++ 
Sbjct: 655 FAYPWYGLGNLLTNHLARYDEAEQAYRRAIEIDPNFADPWYGLGNLLKNHLARYDEAEQA 714

Query: 399 LRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGE-----EVPIEVLNN 453
            R+A +IDP +A  +  LG LLI       L  +  A    ++A E       P   L N
Sbjct: 715 YRRAIEIDPNNAPPWNGLGNLLIQH-----LARYDEAEQAYRRAIEIDPNNAAPWNGLGN 769

Query: 454 IGVIHFEKGEFESAHQSFKDAL 475
           +   H  +  ++ A Q+++ A+
Sbjct: 770 LLKNHLAR--YDEAEQAYRRAI 789


>gi|385809655|ref|YP_005846051.1| hypothetical protein IALB_1072 [Ignavibacterium album JCM 16511]
 gi|383801703|gb|AFH48783.1| TPR repeat protein [Ignavibacterium album JCM 16511]
          Length = 471

 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 73/316 (23%), Positives = 131/316 (41%), Gaps = 32/316 (10%)

Query: 131 WVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQ 190
           W+ KG LL    + E+A  +F+  L  + ++   L+ ++  E N G Y  + E  ++ L 
Sbjct: 77  WLKKGILLNGLMKFEEAIDSFEKALSLNPNDTETLVDKSAAEENMGLYQQAEESLRKVLD 136

Query: 191 VHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA------------ 238
           + P    A    +GL   +  +  +A   F+RA+++DP+ VE    L             
Sbjct: 137 IDPENEDAF-FSLGLLYQRQFKYAEAIPYFERAIKIDPDYVEVYYELGFCYEALNNFDKA 195

Query: 239 ------VMDLQANEAAG-IRKGM-----EKMQRAFEIYPYCAMALNYLANHFFFTGQHFL 286
                  +D     A+G   KG+      K++ A   +       +  A+ ++  G    
Sbjct: 196 LEAYEKFLDFDPYNASGWYNKGIILVKTGKLEEAVNCFDLATSVRDDFASAWYNKGNTLA 255

Query: 287 ----VEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFI 342
                +Q  E    V    P    ++YNLA  Y   G+ ++A  YY    K I    E+ 
Sbjct: 256 DLGKYQQAIECFHKVIEIDPYDETAFYNLASVYEEIGELQQAVKYYS---KAIESDEEYF 312

Query: 343 FPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKA 402
             Y   G     LG ++ AL +F K + I  D+ +  +A   +   LG +E++ +   +A
Sbjct: 313 EAYLARGYCYDSLGKYQLALRDFNKAISISSDDPDAWRAKADLEYSLGHLEESIKSYLEA 372

Query: 403 AKIDPRDAQAFIDLGE 418
           A++ P     + +L E
Sbjct: 373 ARLQPDGYDIWYNLAE 388



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 73/362 (20%), Positives = 140/362 (38%), Gaps = 53/362 (14%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
           A   + KA  ++ ++  T V K       G  +QA  + + VL+ D +N  A      + 
Sbjct: 93  AIDSFEKALSLNPNDTETLVDKSAAEENMGLYQQAEESLRKVLDIDPENEDAFFSLGLLY 152

Query: 173 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 232
             + +Y++++ +++RA+++ P     +   +G C   L    KA +A+++ L  DP N  
Sbjct: 153 QRQFKYAEAIPYFERAIKIDPDYV-EVYYELGFCYEALNNFDKALEAYEKFLDFDPYNAS 211

Query: 233 ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFL----VE 288
                 ++         ++ G  K++ A   +       +  A+ ++  G         +
Sbjct: 212 GWYNKGII--------LVKTG--KLEEAVNCFDLATSVRDDFASAWYNKGNTLADLGKYQ 261

Query: 289 QLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGL 348
           Q  E    V    P    ++YNLA  Y   G+ ++A  YY    K I    E+   Y   
Sbjct: 262 QAIECFHKVIEIDPYDETAFYNLASVYEEIGELQQAVKYYS---KAIESDEEYFEAYLAR 318

Query: 349 GQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK-------------- 394
           G     LG ++ AL +F K + I  D+ +  +A   +   LG +E+              
Sbjct: 319 GYCYDSLGKYQLALRDFNKAISISSDDPDAWRAKADLEYSLGHLEESIKSYLEAARLQPD 378

Query: 395 --------------------AQELLRKAAKIDPRDAQAFIDLGEL-LISSDTGAALDAFK 433
                               A E   +  +I+P+D+ +     ++  I   T  A+D  +
Sbjct: 379 GYDIWYNLAETYYEANKWLNALEAYDQCLRINPKDSNSMYSKAKINFILHRTQEAIDCLR 438

Query: 434 TA 435
            A
Sbjct: 439 KA 440



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 81/399 (20%), Positives = 160/399 (40%), Gaps = 78/399 (19%)

Query: 9   QNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQILEEGSS 68
           Q +EE +R  LD  P +          E A   L L+  R++     +  F + ++    
Sbjct: 125 QQAEESLRKVLDIDPEN----------EDAFFSLGLLYQRQFKYAEAIPYFERAIK---- 170

Query: 69  PEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEP 128
             ID  Y +V YE       LG  Y  L            +F  A + Y K    D +  
Sbjct: 171 --IDPDYVEVYYE-------LGFCYEALN-----------NFDKALEAYEKFLDFDPYNA 210

Query: 129 STWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRA 188
           S W  KG +L+  G++E+A + F +      D   A   +     + G+Y  ++E + + 
Sbjct: 211 SGWYNKGIILVKTGKLEEAVNCFDLATSVRDDFASAWYNKGNTLADLGKYQQAIECFHKV 270

Query: 189 LQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAA 248
           +++ P    A    +     ++G+L +A + + +A++ D E  EA +A            
Sbjct: 271 IEIDPYDETAF-YNLASVYEEIGELQQAVKYYSKAIESDEEYFEAYLARG---------- 319

Query: 249 GIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSY 308
                            YC  +L          G++ L  +    A+++++  P    + 
Sbjct: 320 -----------------YCYDSL----------GKYQLALRDFNKAISISSDDPDAWRAK 352

Query: 309 YNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKV 368
            +L    +S G  E++   Y+ + +     ++    +Y L +   +   + +AL  +++ 
Sbjct: 353 ADLE---YSLGHLEESIKSYLEAARLQPDGYDI---WYNLAETYYEANKWLNALEAYDQC 406

Query: 369 LEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 407
           L I P +  ++ +   I   L + ++A + LRKA +I+P
Sbjct: 407 LRINPKDSNSMYSKAKINFILHRTQEAIDCLRKAFEINP 445



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 64/262 (24%), Positives = 111/262 (42%), Gaps = 28/262 (10%)

Query: 166 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 225
           L Q C++F   ++ D L F  + L++ P     + L  G+    L +  +A  +F++AL 
Sbjct: 46  LIQDCIDF--IKFEDGLYFTDKLLEIFPY-NSELWLKKGILLNGLMKFEEAIDSFEKALS 102

Query: 226 LDPENVEALVALAVMDLQANEAAGI-RKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQH 284
           L+P + E LV  +     A E  G+ ++  E +++  +I P    A   L     +  Q 
Sbjct: 103 LNPNDTETLVDKSA----AEENMGLYQQAEESLRKVLDIDPENEDAFFSLG--LLYQRQF 156

Query: 285 FLVEQLT--ETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFI 342
              E +   E A+ +    P     YY L   Y +  +++KA       ++   K  +F 
Sbjct: 157 KYAEAIPYFERAIKID---PDYVEVYYELGFCYEALNNFDKA-------LEAYEKFLDFD 206

Query: 343 FPY-----YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQE 397
            PY     Y  G + +K G    A+  F+    +  D        G+    LG+ ++A E
Sbjct: 207 -PYNASGWYNKGIILVKTGKLEEAVNCFDLATSVRDDFASAWYNKGNTLADLGKYQQAIE 265

Query: 398 LLRKAAKIDPRDAQAFIDLGEL 419
              K  +IDP D  AF +L  +
Sbjct: 266 CFHKVIEIDPYDETAFYNLASV 287



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 77/319 (24%), Positives = 126/319 (39%), Gaps = 61/319 (19%)

Query: 325 GLYYMASVKEINKPHEFIFPYYGLGQVQLKLG-------DFRSALTNFEKVLEIYPDNCE 377
           GLY+   + EI       FPY    ++ LK G        F  A+ +FEK L + P++ E
Sbjct: 59  GLYFTDKLLEI-------FPYNS--ELWLKKGILLNGLMKFEEAIDSFEKALSLNPNDTE 109

Query: 378 TLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL----------------- 420
           TL         +G  ++A+E LRK   IDP +  AF  LG L                  
Sbjct: 110 TLVDKSAAEENMGLYQQAEESLRKVLDIDPENEDAFFSLGLLYQRQFKYAEAIPYFERAI 169

Query: 421 -ISSD----------TGAALDAFKTARTLLKKAGEEVPIEVLN--NIGVIHFEKGEFESA 467
            I  D             AL+ F  A    +K  +  P       N G+I  + G+ E A
Sbjct: 170 KIDPDYVEVYYELGFCYEALNNFDKALEAYEKFLDFDPYNASGWYNKGIILVKTGKLEEA 229

Query: 468 HQSFKDALGDGIWLTLLDSKTKTYVIDAS--ASMLQFKD-MQLFHRFENDGNHVELPWNK 524
              F  A       ++ D     +    +  A + +++  ++ FH+       +E+    
Sbjct: 230 VNCFDLAT------SVRDDFASAWYNKGNTLADLGKYQQAIECFHKV------IEIDPYD 277

Query: 525 VTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNE 584
            T  +NLA + E+I +   A   Y   +   ++Y +AYL       +    QL++   N+
Sbjct: 278 ETAFYNLASVYEEIGELQQAVKYYSKAIESDEEYFEAYLARGYCYDSLGKYQLALRDFNK 337

Query: 585 ALKVNGKYPNALSMLGDLE 603
           A+ ++   P+A     DLE
Sbjct: 338 AISISSDDPDAWRAKADLE 356


>gi|308810278|ref|XP_003082448.1| SPINDLY protein (ISS) [Ostreococcus tauri]
 gi|116060916|emb|CAL57394.1| SPINDLY protein (ISS) [Ostreococcus tauri]
          Length = 946

 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 88/378 (23%), Positives = 149/378 (39%), Gaps = 57/378 (15%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKI-------------VLEADR 159
           A + +  A   D   P  W G G+L  A G  ++A+  ++                EAD+
Sbjct: 105 AYERFRAACGDDDGRPEAWCGLGRLAHASGAYDEATKCYRRGRDRFKELGAMDEAREADQ 164

Query: 160 DNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQA 219
               A           G    +L  Y+  +   P C  A    +G+   + GQL +A  A
Sbjct: 165 TLAAAWTDLGTTHKAAGDVERALATYRAVIAELPWCAAAAYYNLGVSLVECGQLVEAEHA 224

Query: 220 FQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFF 279
           ++R++ +DP   EA   + V          + K M +M  A E Y +C      LA  F 
Sbjct: 225 YRRSIAVDPTRAEAYCNIGV----------VFKMMSRMDEAVEAYEHCLR----LAPDFE 270

Query: 280 FTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSK-GDYEKAGLYYMASVKEINKP 338
              ++         +L +T+ G     + + +  S  +    YE+A  Y   +V+     
Sbjct: 271 LGRKNL--------SLVLTDQG-----TEFKMKNSLSAAMATYERALTYDSLNVEA---- 313

Query: 339 HEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQEL 398
                 YY LG    +  ++  A+  +E    + P   E     G +Y + G  E+A E 
Sbjct: 314 ------YYNLGVACAEAEEYDRAIIAYETAGRLRPHYAEVWNNAGVLYKERGNDERAMEY 367

Query: 399 LRKAAKIDPRDAQAFIDLGEL-LISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVI 457
             +A   +P  AQ   +LG L  +S     ALDA + A T+     +       NNIGV+
Sbjct: 368 YHRAVACNPNFAQPLNNLGVLHTMSGQAQFALDALQRAVTV-----DPAYAVAHNNIGVL 422

Query: 458 HFEKGEFESAHQSFKDAL 475
             + G+ E A  ++++ +
Sbjct: 423 LRDTGDIEHACDAYRECV 440


>gi|118362609|ref|XP_001014531.1| TPR Domain containing protein [Tetrahymena thermophila]
 gi|89296298|gb|EAR94286.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
          Length = 1163

 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 103/481 (21%), Positives = 190/481 (39%), Gaps = 61/481 (12%)

Query: 175  RGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEAL 234
            +G   ++++ +++ L +        ++ +G+C  K G+L +A + FQ  L L+P+N   +
Sbjct: 686  KGMLDEAIKQFQKYLSIDSE-NDTCQMNLGICLEKTGKLDEAIKQFQNCLDLNPKN--EI 742

Query: 235  VALAVMDLQANEAAGIRKGMEKMQRAFEIYP---YCAMALNYLANHFFFTGQHFLVEQLT 291
              L + D+   +A  I + +   ++  EI P    C ++L     +         + +  
Sbjct: 743  CYLKIGDVYRKKAM-INEAISAYKKCLEINPKNDICCLSLGICLEN------SNKINEAI 795

Query: 292  ETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQV 351
            E  L      P     Y NL   Y ++ + +KA   Y    K +N   +    YY LG+ 
Sbjct: 796  ECYLNCIEINPQNDICYMNLGNLYQNQNELDKAIESY---YKCLNVNPQLDSCYYYLGEA 852

Query: 352  QLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQ 411
            Q K   F  ++ ++ K LEI P+N     +LG  Y   G I +A  +  K+  ++ +   
Sbjct: 853  QYKKSLFDESIKSYLKCLEINPNNEACYLSLGQTYQNQGMINEAILIYEKSLNLNIKIDV 912

Query: 412  AFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLN-----NIGVIHFEKGEFES 466
              ++LG   +  +    +D        +KK  + + I   N     N+G  +  KG F+ 
Sbjct: 913  CCLNLG---VCYEIKGRID------EAIKKYQQSIEINPANDVCFLNLGNAYLNKGMFDE 963

Query: 467  AHQSFKDAL-----GDGIWLTL---------LDSKTKTY----VIDASASMLQFKDMQLF 508
            A Q+++  L      +  +L L         LD   K Y    +++    +     + L 
Sbjct: 964  AIQAYQKCLQLNPKKEACYLNLGNVYQIKGELDKAIKCYQKCIILNPKKDICY---LNLG 1020

Query: 509  HRFENDGN----------HVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDY 558
            + ++N GN           + L     T L NL    +       A   YR  L    + 
Sbjct: 1021 NAYQNKGNLEESIKNYQKCLNLNPKNDTCLENLGNAFKNKGMIEEAIKQYRFCLQLNPNK 1080

Query: 559  VDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRA 618
               YL L    + +  L  +IE  N+ + +N     + + LG   L  D    A + F+ 
Sbjct: 1081 YSCYLNLGNTYQKKGMLDEAIECYNKCININPNNETSYANLGLCYLSKDMKYDAIKQFQK 1140

Query: 619  A 619
             
Sbjct: 1141 C 1141



 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 70/307 (22%), Positives = 136/307 (44%), Gaps = 14/307 (4%)

Query: 113  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADR--DNVPALLGQAC 170
            A + Y     I+      ++  G L   + E+++A  ++   L  +   D+    LG+A 
Sbjct: 794  AIECYLNCIEINPQNDICYMNLGNLYQNQNELDKAIESYYKCLNVNPQLDSCYYYLGEA- 852

Query: 171  VEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPEN 230
             ++ +  + +S++ Y + L+++P+   A  L +G      G + +A   ++++L L   N
Sbjct: 853  -QYKKSLFDESIKSYLKCLEINPN-NEACYLSLGQTYQNQGMINEAILIYEKSLNL---N 907

Query: 231  VEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQL 290
            ++  V    + +       I + ++K Q++ EI P   +    L N +   G      Q 
Sbjct: 908  IKIDVCCLNLGVCYEIKGRIDEAIKKYQQSIEINPANDVCFLNLGNAYLNKGMFDEAIQA 967

Query: 291  TETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQ 350
             +  L +    P K   Y NL   Y  KG+ +KA   Y   +  I  P + I  Y  LG 
Sbjct: 968  YQKCLQLN---PKKEACYLNLGNVYQIKGELDKAIKCYQKCI--ILNPKKDI-CYLNLGN 1021

Query: 351  VQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDA 410
                 G+   ++ N++K L + P N   L+ LG+ +   G IE+A +  R   +++P   
Sbjct: 1022 AYQNKGNLEESIKNYQKCLNLNPKNDTCLENLGNAFKNKGMIEEAIKQYRFCLQLNPNKY 1081

Query: 411  QAFIDLG 417
              +++LG
Sbjct: 1082 SCYLNLG 1088



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 74/341 (21%), Positives = 150/341 (43%), Gaps = 16/341 (4%)

Query: 80   YERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLL 139
            Y+ + +   L   Y YLG+ + K+   +E    + + Y K   I+ +  + ++  GQ   
Sbjct: 833  YKCLNVNPQLDSCYYYLGEAQYKKSLFDE----SIKSYLKCLEINPNNEACYLSLGQTYQ 888

Query: 140  AKGEVEQASSAFKIVLEAD-RDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGA 198
             +G + +A   ++  L  + + +V  L    C E  +GR  ++++ Y+++++++P+    
Sbjct: 889  NQGMINEAILIYEKSLNLNIKIDVCCLNLGVCYEI-KGRIDEAIKKYQQSIEINPA-NDV 946

Query: 199  IRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQ 258
              L +G      G   +A QA+Q+ LQL+P+     + L  +     E   + K ++  Q
Sbjct: 947  CFLNLGNAYLNKGMFDEAIQAYQKCLQLNPKKEACYLNLGNVYQIKGE---LDKAIKCYQ 1003

Query: 259  RAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSK 318
            +   + P   +    L N +   G    +E+  +      N  P       NL  ++ +K
Sbjct: 1004 KCIILNPKKDICYLNLGNAYQNKGN---LEESIKNYQKCLNLNPKNDTCLENLGNAFKNK 1060

Query: 319  GDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCET 378
            G  E+A   Y   + ++N P+++   Y  LG    K G    A+  + K + I P+N  +
Sbjct: 1061 GMIEEAIKQYRFCL-QLN-PNKY-SCYLNLGNTYQKKGMLDEAIECYNKCININPNNETS 1117

Query: 379  LKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGEL 419
               LG  Y+       A +  +K  +I+P +    I L ++
Sbjct: 1118 YANLGLCYLSKDMKYDAIKQFQKCLQINPNNKTCLISLQKM 1158



 Score = 47.8 bits (112), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 105/502 (20%), Positives = 191/502 (38%), Gaps = 67/502 (13%)

Query: 309 YNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKV 368
           +NL  SY  KG   KA   Y   +  +N  ++    +Y LG    K G    AL +F+  
Sbjct: 439 FNLGISYKKKGMLNKAIKQYKKCL-SLNPKYDAC--HYNLGIAYKKKGMVDEALKSFQDC 495

Query: 369 LEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL-ISSDTGA 427
           +++ P        +G+IY+    +E+A    +K   +DP     F +LG +         
Sbjct: 496 IDLNPKYGACYYNIGNIYLMKDLLEEAIAQYQKCLTLDPNYEACFFNLGVIYKKKCMIEE 555

Query: 428 ALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALG-----DGIWLT 482
           A++ F+   +L +K           N+G+I  EKG  + A + F   L      D  + +
Sbjct: 556 AVNLFEKCLSLNQKY-----YACYYNLGLIQNEKGIIDEAIKLFLKCLDINPNFDACYYS 610

Query: 483 L-LDSKTKTYVIDASASMLQFKDM-----QLFHRFENDGNHVELPWNKVTVLFNLARLLE 536
           L +  K K  + DA   + QF++      +L + F   GN          V ++   L E
Sbjct: 611 LGVAYKNKGMLNDA---IKQFQNCINLNSKLDYCFFELGN----------VQYDQGMLDE 657

Query: 537 QIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNAL 596
            +   +    L        Q + +  L+L  I + +  L  +I+   + L ++ +     
Sbjct: 658 SVQSYLKCIDL-------NQSFQNCSLKLGNIYQQKGMLDEAIKQFQKYLSIDSENDTCQ 710

Query: 597 SMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATH 656
             LG    K     +A + F+   D  + K+    L +G+     A+ NE          
Sbjct: 711 MNLGICLEKTGKLDEAIKQFQNCLD-LNPKNEICYLKIGDVYRKKAMINE---------- 759

Query: 657 LEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDV 716
              A   Y + +  +  N       G+ L    + + + + +    E     +  Q    
Sbjct: 760 ---AISAYKKCLEINPKNDICCLSLGICLENSNKINEAIECYLNCIE-----INPQNDIC 811

Query: 717 WINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQI---LLYLARTHYEAEQWQDCKKSL 773
           ++NL ++Y  Q     A++ Y  CL     N + Q+     YL    Y+   + +  KS 
Sbjct: 812 YMNLGNLYQNQNELDKAIESYYKCL-----NVNPQLDSCYYYLGEAQYKKSLFDESIKSY 866

Query: 774 LRAIHLAPSNYTLRFDAGVAMQ 795
           L+ + + P+N       G   Q
Sbjct: 867 LKCLEINPNNEACYLSLGQTYQ 888



 Score = 46.2 bits (108), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 36/167 (21%), Positives = 70/167 (41%), Gaps = 6/167 (3%)

Query: 80   YERIAILNAL-GVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLL 138
            Y++  ILN    + Y  LG     +   EE    + + Y K   ++    +     G   
Sbjct: 1002 YQKCIILNPKKDICYLNLGNAYQNKGNLEE----SIKNYQKCLNLNPKNDTCLENLGNAF 1057

Query: 139  LAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGA 198
              KG +E+A   ++  L+ + +     L        +G   +++E Y + + ++P+   +
Sbjct: 1058 KNKGMIEEAIKQYRFCLQLNPNKYSCYLNLGNTYQKKGMLDEAIECYNKCININPNNETS 1117

Query: 199  IRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQAN 245
                +GLC         A + FQ+ LQ++P N   L++L  M  + N
Sbjct: 1118 YA-NLGLCYLSKDMKYDAIKQFQKCLQINPNNKTCLISLQKMQNKKN 1163



 Score = 41.2 bits (95), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 63/337 (18%), Positives = 129/337 (38%), Gaps = 28/337 (8%)

Query: 90  GVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASS 149
           G  Y  +G I   +   EE    A   Y K   +D +  + +   G +   K  +E+A +
Sbjct: 503 GACYYNIGNIYLMKDLLEE----AIAQYQKCLTLDPNYEACFFNLGVIYKKKCMIEEAVN 558

Query: 150 AFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYK 209
            F+  L  ++           ++  +G   ++++ + + L ++P+   A    +G+    
Sbjct: 559 LFEKCLSLNQKYYACYYNLGLIQNEKGIIDEAIKLFLKCLDINPN-FDACYYSLGVAYKN 617

Query: 210 LGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAM 269
            G L  A + FQ  + L+ +          +D    E   ++     +  + + Y  C  
Sbjct: 618 KGMLNDAIKQFQNCINLNSK----------LDYCFFELGNVQYDQGMLDESVQSYLKCID 667

Query: 270 ALNYLANHFFFTGQHFLVEQLTETA-------LAVTNHGPTKSHSYYNLARSYHSKGDYE 322
                 N     G  +  + + + A       L++ +   T      NL       G  +
Sbjct: 668 LNQSFQNCSLKLGNIYQQKGMLDEAIKQFQKYLSIDSENDTCQM---NLGICLEKTGKLD 724

Query: 323 KAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKAL 382
           +A +    +  ++N  +E    Y  +G V  K      A++ ++K LEI P N     +L
Sbjct: 725 EA-IKQFQNCLDLNPKNEIC--YLKIGDVYRKKAMINEAISAYKKCLEINPKNDICCLSL 781

Query: 383 GHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGEL 419
           G       +I +A E      +I+P++   +++LG L
Sbjct: 782 GICLENSNKINEAIECYLNCIEINPQNDICYMNLGNL 818



 Score = 39.7 bits (91), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 90/484 (18%), Positives = 185/484 (38%), Gaps = 62/484 (12%)

Query: 50  YFKQGKVEQFRQILEEGSSPEIDEYYADVRYERI--AILNALGVYYTYLGKIETKQREKE 107
           YF  G V + ++I +E     I ++   +R  R   A L  LG+ Y   G +    ++ +
Sbjct: 404 YFNLGIVYKIKRIYDEA----IKQFQKCLRLNRKYDACLFNLGISYKKKGMLNKAIKQYK 459

Query: 108 EHFILATQY----------YNKASRIDMHEPS-------------TWVGKGQLLLAKGEV 144
           +   L  +Y          Y K   +D    S              +   G + L K  +
Sbjct: 460 KCLSLNPKYDACHYNLGIAYKKKGMVDEALKSFQDCIDLNPKYGACYYNIGNIYLMKDLL 519

Query: 145 EQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIG 204
           E+A + ++  L  D +          +   +    +++  +++ L ++     A    +G
Sbjct: 520 EEAIAQYQKCLTLDPNYEACFFNLGVIYKKKCMIEEAVNLFEKCLSLNQK-YYACYYNLG 578

Query: 205 LCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIY 264
           L + + G + +A + F + L ++P       +L V        A   KGM  +  A + +
Sbjct: 579 LIQNEKGIIDEAIKLFLKCLDINPNFDACYYSLGV--------AYKNKGM--LNDAIKQF 628

Query: 265 PYCAMALNYLANHFFFTGQ----HFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGD 320
             C    + L   FF  G       ++++  ++ L   +   +  +    L   Y  KG 
Sbjct: 629 QNCINLNSKLDYCFFELGNVQYDQGMLDESVQSYLKCIDLNQSFQNCSLKLGNIYQQKGM 688

Query: 321 YEKAGLYYMA--SVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCET 378
            ++A   +    S+   N   +       LG    K G    A+  F+  L++ P N   
Sbjct: 689 LDEAIKQFQKYLSIDSENDTCQM-----NLGICLEKTGKLDEAIKQFQNCLDLNPKNEIC 743

Query: 379 LKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSD-TGAALDAFKTART 437
              +G +Y +   I +A    +K  +I+P++    + LG  L +S+    A++ +     
Sbjct: 744 YLKIGDVYRKKAMINEAISAYKKCLEINPKNDICCLSLGICLENSNKINEAIECYLNCIE 803

Query: 438 LLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALG-----DGIWLTLLDSKTKTYV 492
           +      +  I  + N+G ++  + E + A +S+   L      D  +  L +++ K  +
Sbjct: 804 I----NPQNDICYM-NLGNLYQNQNELDKAIESYYKCLNVNPQLDSCYYYLGEAQYKKSL 858

Query: 493 IDAS 496
            D S
Sbjct: 859 FDES 862


>gi|20090223|ref|NP_616298.1| O-linked GlcNAc transferase [Methanosarcina acetivorans C2A]
 gi|19915215|gb|AAM04778.1| O-linked GlcNAc transferase [Methanosarcina acetivorans C2A]
          Length = 400

 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 83/341 (24%), Positives = 144/341 (42%), Gaps = 57/341 (16%)

Query: 77  DVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQ 136
           ++  E   + N +   Y+ +G+ E            A + Y KA  +    P+ W GK  
Sbjct: 115 EINSEDADLWNNMAFSYSQVGEYER-----------AVEAYGKALELRPDYPNAWYGKAL 163

Query: 137 LLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCP 196
            L   G  E+A  A++ VLE   D   A  G+       GRY +++  Y +A+++ P   
Sbjct: 164 NLSQAGSYEEAVEAYEKVLEESPDYKEAWAGKGIALGQMGRYDEAIIAYDKAIEIDPGFL 223

Query: 197 GAIRL-GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGME 255
            A    G+ L    LG   +A +A+++A++LDPEN +A   + + DL+          +E
Sbjct: 224 EAWYYKGVDLD--SLGSHRQALKAYEKAVELDPENDDAWNNMGI-DLE---------NLE 271

Query: 256 KMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSY 315
           K + A   +   A+A+N   +  ++  + F + Q+               H +     +Y
Sbjct: 272 KYEEAINAFD-KAIAINSENSDVWYN-KGFTLSQM---------------HRFEEAVEAY 314

Query: 316 HSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDN 375
                            K      E++  Y  LG V  +L +F  AL  +EK LE+    
Sbjct: 315 R----------------KATQLDPEYLEAYTSLGFVLAQLKNFEEALETYEKALELDQGA 358

Query: 376 CETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDL 416
            ++          LG+ E+A++  RKA +IDPR A+   D+
Sbjct: 359 ADSWFGKAVCLSFLGREEEAEDAYRKAVEIDPRYAEIGGDI 399



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 71/314 (22%), Positives = 138/314 (43%), Gaps = 28/314 (8%)

Query: 135 GQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS 194
           G  LL  G+  +A  AF   +E D  N+  L  +A    + GR+ ++L+ Y++A++++ S
Sbjct: 60  GLDLLKLGKFNEAIIAFDKAIEKDPKNIYLLNNKAAALESFGRFEEALKLYQKAVEIN-S 118

Query: 195 CPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGM 254
               +   +     ++G+  +A +A+ +AL+L P+   A    A   L  ++A    + +
Sbjct: 119 EDADLWNNMAFSYSQVGEYERAVEAYGKALELRPDYPNAWYGKA---LNLSQAGSYEEAV 175

Query: 255 EKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG------PTKSHSY 308
           E  ++  E  P    A         + G+   + Q+     A+  +       P    ++
Sbjct: 176 EAYEKVLEESPDYKEA---------WAGKGIALGQMGRYDEAIIAYDKAIEIDPGFLEAW 226

Query: 309 YNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKV 368
           Y       S G + +A   Y  +V E++  ++  +   G+    L+   +  A+  F+K 
Sbjct: 227 YYKGVDLDSLGSHRQALKAYEKAV-ELDPENDDAWNNMGIDLENLE--KYEEAINAFDKA 283

Query: 369 LEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAA 428
           + I  +N +     G    Q+ + E+A E  RKA ++DP   +A+  LG +L      A 
Sbjct: 284 IAINSENSDVWYNKGFTLSQMHRFEEAVEAYRKATQLDPEYLEAYTSLGFVL------AQ 337

Query: 429 LDAFKTARTLLKKA 442
           L  F+ A    +KA
Sbjct: 338 LKNFEEALETYEKA 351


>gi|406951392|gb|EKD81348.1| hypothetical protein ACD_39C01851G0002 [uncultured bacterium]
          Length = 276

 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 60/246 (24%), Positives = 118/246 (47%), Gaps = 40/246 (16%)

Query: 201 LGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRA 260
           + +G+  ++ G +  A + ++RAL+L  ++ EA    A M + +  A  + K +E +QRA
Sbjct: 27  IALGIASFENGDVETAIRHYERALKLKSDSAEAH---AGMGISSARAGNLDKAVEHLQRA 83

Query: 261 FEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGD 320
           +E+ P C +  N+LA+ +F  G+   +++  E       +  T S+++ ++A +Y  +GD
Sbjct: 84  YELSPDCGLLANWLADAWFDKGE---LDRAIEYYSEAIRNNATDSNAHNDMADAYRLQGD 140

Query: 321 YEKA----------------GLYYMASVK-EINKPHEFI---------FPYYG------- 347
           Y+KA                 +  MA  + ++N+P E +         FP          
Sbjct: 141 YQKAFELYRRTLQIDPLDTNAMLEMAQCQTQMNQPDEALQTLTNLINNFPSSRDSATAMV 200

Query: 348 -LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKID 406
             G + L  GD+ +A + F++ LE +P N + L       ++ G  E+    L++  ++D
Sbjct: 201 ICGTILLGNGDYNNAGSWFDRALEFFPFNRQVLFQSAVCALKQGNSEQCAAHLKRILEMD 260

Query: 407 PRDAQA 412
           P D +A
Sbjct: 261 PSDNRA 266


>gi|118384080|ref|XP_001025193.1| TPR Domain containing protein [Tetrahymena thermophila]
 gi|89306960|gb|EAS04948.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
          Length = 658

 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 102/455 (22%), Positives = 197/455 (43%), Gaps = 44/455 (9%)

Query: 43  WLIIAREYFKQGKVEQ----FRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGK 98
           +  +A  Y+K GKV++    F+Q +E     E       + Y+R  +     + +     
Sbjct: 186 YNCLANIYYKIGKVDEAISIFKQCIEVNPKHENTYINLGLTYKRKGMSEEALILFKRC-- 243

Query: 99  IETKQREKEEHFILATQYYNKASRIDMH----------EPSTWVGKGQLLLA---KGEVE 145
           +E   R +  H+ +  +Y ++  R+D             PS       L  A   KG +E
Sbjct: 244 LEINSRNEVAHYNIGLEYIHQG-RVDEAILVFLKSLDLNPSYEECLNSLASAYEEKGMME 302

Query: 146 QASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGL 205
            A   ++  L+ +++N  AL     +   + ++S S+ ++K+ +Q++P  P     G+G 
Sbjct: 303 DAIETYQKCLQLNQNNEIALYNLGLIYKQQCQFSQSILYFKKCIQINPKDPDYYN-GLGN 361

Query: 206 CRYKL-GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIY 264
             Y+L GQL  + Q     ++L+P +      L +   Q        +  +   ++ EI 
Sbjct: 362 -SYRLNGQLDDSIQTILICVKLNPNDDSYHYNLGLAYYQK---GCFLEASQYFSKSLEIN 417

Query: 265 PYCAMALNYLANHFFFTGQHFLVEQLTETALAVTN---HGPTKSHSYYNLARSYHSKGDY 321
           P  +  L      + +    + +EQL +   A      + P   ++YYNL ++Y+ +   
Sbjct: 418 PKDSQTL------YHYGLCCYELEQLDKAVSAFVQSLEYDPKNENTYYNLGQAYYDQNKI 471

Query: 322 EKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKA 381
           E++   +   + EIN P+  ++ Y  LG    + G     +  F+K L+I P +  TL  
Sbjct: 472 EESIQCFKICL-EIN-PNNSLY-YNSLGLCFCQKGQLDEGIACFKKSLDINPSDENTLNN 528

Query: 382 LGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSD-TGAALDAFKTARTLLK 440
           LG+ Y   G IE + +  +   +I+PR+     +LG           A+ ++K  ++L  
Sbjct: 529 LGNTYRLKGNIEDSIKCYKVCLEINPRNDICHCNLGIAYFQKGIIEGAIQSYK--KSLEI 586

Query: 441 KAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
               E  +  L   G+  +EKG+F+ A  S++  L
Sbjct: 587 NPKNEYSLYYL---GLAFYEKGKFDDAILSYRQCL 618



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/296 (23%), Positives = 136/296 (45%), Gaps = 14/296 (4%)

Query: 116 YYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIV--LEADRDNVPALLGQACVEF 173
           Y+ K  +I+  +P  + G G      G+++ +     I   L  + D+    LG A   +
Sbjct: 341 YFKKCIQINPKDPDYYNGLGNSYRLNGQLDDSIQTILICVKLNPNDDSYHYNLGLA--YY 398

Query: 174 NRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEA 233
            +G + ++ +++ ++L+++P          GLC Y+L QL KA  AF ++L+ DP+N   
Sbjct: 399 QKGCFLEASQYFSKSLEINPK-DSQTLYHYGLCCYELEQLDKAVSAFVQSLEYDPKNENT 457

Query: 234 LVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTET 293
              L       N+   I + ++  +   EI P  ++  N L   F   GQ   +++    
Sbjct: 458 YYNLGQAYYDQNK---IEESIQCFKICLEINPNNSLYYNSLGLCFCQKGQ---LDEGIAC 511

Query: 294 ALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQL 353
                +  P+  ++  NL  +Y  KG+ E +   Y   + EIN  ++    +  LG    
Sbjct: 512 FKKSLDINPSDENTLNNLGNTYRLKGNIEDSIKCYKVCL-EINPRNDIC--HCNLGIAYF 568

Query: 354 KLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRD 409
           + G    A+ +++K LEI P N  +L  LG  + + G+ + A    R+  +++P++
Sbjct: 569 QKGIIEGAIQSYKKSLEINPKNEYSLYYLGLAFYEKGKFDDAILSYRQCLELNPQE 624



 Score = 72.8 bits (177), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 117/520 (22%), Positives = 222/520 (42%), Gaps = 58/520 (11%)

Query: 250 IRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYY 309
           I + ++  ++  E  P    ALN L   + +  +  + E +      +  H P    SYY
Sbjct: 63  IDEAIQSFKKCLEFNPKHQNALNQLG--YAYHQKKMINESIACYKKNIELH-PNDHLSYY 119

Query: 310 NLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVL 369
           NL  + H  G +++A   Y  +++   KP+ +   Y  LG +Q  +G  + A+ ++ K+L
Sbjct: 120 NLGLALHDSGKFQEAISSYNKAIQL--KPN-YEMCYEALGNLQQDMGLIQEAIFSYNKIL 176

Query: 370 EIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAAL 429
           E+ P        L +IY ++G++++A  + ++  +++P+    +I+LG  L     G + 
Sbjct: 177 EVNPKYENGYNCLANIYYKIGKVDEAISIFKQCIEVNPKHENTYINLG--LTYKRKGMSE 234

Query: 430 DAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLD-SKT 488
           +A      L K+      +E+ +   V H+  G  E  HQ   D     ++L  LD + +
Sbjct: 235 EAL----ILFKRC-----LEINSRNEVAHYNIG-LEYIHQGRVDE-AILVFLKSLDLNPS 283

Query: 489 KTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLY 548
               +++ AS  + K M +    E     ++L  N    L+NL  + +Q     + S+LY
Sbjct: 284 YEECLNSLASAYEEKGM-MEDAIETYQKCLQLNQNNEIALYNLGLIYKQ-QCQFSQSILY 341

Query: 549 --RLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLEL-- 604
             + I    +D  D Y  L    +    L  SI+ +   +K+N   PN  S   +L L  
Sbjct: 342 FKKCIQINPKD-PDYYNGLGNSYRLNGQLDDSIQTILICVKLN---PNDDSYHYNLGLAY 397

Query: 605 -KNDDWVKAKETFRAASDATDGKDSYATLSLGNWNY---------FAALRNEKRAPKLEA 654
            +   +++A + F + S   + KDS      G   Y          A +++ +  PK E 
Sbjct: 398 YQKGCFLEASQYF-SKSLEINPKDSQTLYHYGLCCYELEQLDKAVSAFVQSLEYDPKNEN 456

Query: 655 TH------------LEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQ 702
           T+            +E++ + +   +  + +N    N  G+   +KGQ D     F +  
Sbjct: 457 TYYNLGQAYYDQNKIEESIQCFKICLEINPNNSLYYNSLGLCFCQKGQLDEGIACFKK-- 514

Query: 703 EAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLR 742
              S  +     +   NL + Y  +GN   ++K Y+ CL 
Sbjct: 515 ---SLDINPSDENTLNNLGNTYRLKGNIEDSIKCYKVCLE 551



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 102/460 (22%), Positives = 171/460 (37%), Gaps = 106/460 (23%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRD---------NVP 163
           A   YNKA ++  +    +   G L    G +++A  ++  +LE +           N+ 
Sbjct: 134 AISSYNKAIQLKPNYEMCYEALGNLQQDMGLIQEAIFSYNKILEVNPKYENGYNCLANIY 193

Query: 164 ALLGQA---------CVEFN----------------RGRYSDSLEFYKRALQVHPSCPGA 198
             +G+          C+E N                +G   ++L  +KR L+++     A
Sbjct: 194 YKIGKVDEAISIFKQCIEVNPKHENTYINLGLTYKRKGMSEEALILFKRCLEINSRNEVA 253

Query: 199 IRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA------------------VM 240
               IGL     G++ +A   F ++L L+P   E L +LA                   +
Sbjct: 254 -HYNIGLEYIHQGRVDEAILVFLKSLDLNPSYEECLNSLASAYEEKGMMEDAIETYQKCL 312

Query: 241 DL-QANEAAGIRKGMEKMQ------------RAFEIYPYCAMALNYLANHFFFTGQHFLV 287
            L Q NE A    G+   Q            +  +I P      N L N +   GQ   +
Sbjct: 313 QLNQNNEIALYNLGLIYKQQCQFSQSILYFKKCIQINPKDPDYYNGLGNSYRLNGQ---L 369

Query: 288 EQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEIN-KPHEFIF--- 343
           +   +T L      P     +YNL  +Y+ KG + +A  Y+  S+ EIN K  + ++   
Sbjct: 370 DDSIQTILICVKLNPNDDSYHYNLGLAYYQKGCFLEASQYFSKSL-EINPKDSQTLYHYG 428

Query: 344 ----------------------------PYYGLGQVQLKLGDFRSALTNFEKVLEIYPDN 375
                                        YY LGQ          ++  F+  LEI P+N
Sbjct: 429 LCCYELEQLDKAVSAFVQSLEYDPKNENTYYNLGQAYYDQNKIEESIQCFKICLEINPNN 488

Query: 376 CETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTA 435
                +LG  + Q GQ+++     +K+  I+P D     +LG        G   D+ K  
Sbjct: 489 SLYYNSLGLCFCQKGQLDEGIACFKKSLDINPSDENTLNNLGNTY--RLKGNIEDSIKCY 546

Query: 436 RTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
           +  L+            N+G+ +F+KG  E A QS+K +L
Sbjct: 547 KVCLEINPRNDICHC--NLGIAYFQKGIIEGAIQSYKKSL 584



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 67/274 (24%), Positives = 127/274 (46%), Gaps = 10/274 (3%)

Query: 144 VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGI 203
           +++A  +FK  LE +  +  AL         +   ++S+  YK+ +++HP+        +
Sbjct: 63  IDEAIQSFKKCLEFNPKHQNALNQLGYAYHQKKMINESIACYKKNIELHPN-DHLSYYNL 121

Query: 204 GLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEI 263
           GL  +  G+  +A  ++ +A+QL P N E +   A+ +LQ  +   I++ +    +  E+
Sbjct: 122 GLALHDSGKFQEAISSYNKAIQLKP-NYE-MCYEALGNLQQ-DMGLIQEAIFSYNKILEV 178

Query: 264 YPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEK 323
            P      N LAN ++  G+   V++            P   ++Y NL  +Y  KG  E+
Sbjct: 179 NPKYENGYNCLANIYYKIGK---VDEAISIFKQCIEVNPKHENTYINLGLTYKRKGMSEE 235

Query: 324 AGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALG 383
           A + +   + EIN  +E    +Y +G   +  G    A+  F K L++ P   E L +L 
Sbjct: 236 ALILFKRCL-EINSRNE--VAHYNIGLEYIHQGRVDEAILVFLKSLDLNPSYEECLNSLA 292

Query: 384 HIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 417
             Y + G +E A E  +K  +++  +  A  +LG
Sbjct: 293 SAYEEKGMMEDAIETYQKCLQLNQNNEIALYNLG 326



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 67/288 (23%), Positives = 121/288 (42%), Gaps = 48/288 (16%)

Query: 110 FILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEAD--RDNVPALLG 167
           F+ A+QY++K+  I+  +  T    G       ++++A SAF   LE D   +N    LG
Sbjct: 403 FLEASQYFSKSLEINPKDSQTLYHYGLCCYELEQLDKAVSAFVQSLEYDPKNENTYYNLG 462

Query: 168 QACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLD 227
           QA   +++ +  +S++ +K  L+++P+        +GLC  + GQL +    F+++L ++
Sbjct: 463 QA--YYDQNKIEESIQCFKICLEINPN-NSLYYNSLGLCFCQKGQLDEGIACFKKSLDIN 519

Query: 228 PENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLV 287
           P +                                        LN L N +   G    +
Sbjct: 520 PSD-------------------------------------ENTLNNLGNTYRLKGN---I 539

Query: 288 EQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYG 347
           E   +         P     + NL  +Y  KG  E A   Y  S+ EIN  +E+   Y G
Sbjct: 540 EDSIKCYKVCLEINPRNDICHCNLGIAYFQKGIIEGAIQSYKKSL-EINPKNEYSLYYLG 598

Query: 348 LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKA 395
           L   +   G F  A+ ++ + LE+ P      + +GH Y ++G +++A
Sbjct: 599 LAFYE--KGKFDDAILSYRQCLELNPQENLQNQFIGHEYREIGNLDQA 644



 Score = 47.8 bits (112), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 44/215 (20%), Positives = 95/215 (44%), Gaps = 29/215 (13%)

Query: 19  LDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQ----FRQILEEGSSPEIDEY 74
           L+QL +  S  +  L+ +    + +  + + Y+ Q K+E+    F+  LE   +P    Y
Sbjct: 434 LEQLDKAVSAFVQSLEYDPKNENTYYNLGQAYYDQNKIEESIQCFKICLE--INPNNSLY 491

Query: 75  YADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGK 134
           Y           N+LG+ +   G+++                + K+  I+  + +T    
Sbjct: 492 Y-----------NSLGLCFCQKGQLDE-----------GIACFKKSLDINPSDENTLNNL 529

Query: 135 GQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS 194
           G     KG +E +   +K+ LE +  N           F +G    +++ YK++L+++P 
Sbjct: 530 GNTYRLKGNIEDSIKCYKVCLEINPRNDICHCNLGIAYFQKGIIEGAIQSYKKSLEINPK 589

Query: 195 CPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPE 229
              ++   +GL  Y+ G+   A  ++++ L+L+P+
Sbjct: 590 NEYSLYY-LGLAFYEKGKFDDAILSYRQCLELNPQ 623


>gi|298675989|ref|YP_003727739.1| hypothetical protein Metev_2116 [Methanohalobium evestigatum
           Z-7303]
 gi|298288977|gb|ADI74943.1| TPR repeat-containing protein [Methanohalobium evestigatum Z-7303]
          Length = 461

 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 75/309 (24%), Positives = 139/309 (44%), Gaps = 44/309 (14%)

Query: 109 HFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQ 168
           H+ LA + + KAS ++  +   W+ KG L     + E+A  ++   LE + DN  A + +
Sbjct: 147 HYDLALETFKKASDLNPEDDFIWIEKGILYDGLEKYEKALESYDKALEINPDNETAWINK 206

Query: 169 ACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDP 228
                   RY D+L+ + +A+ ++P          G+ + KL     A Q++ RA++L+P
Sbjct: 207 GHTLNKLERYEDALKAFNKAITINPDNEETWDYK-GIVQEKLNLYEDALQSYNRAIKLNP 265

Query: 229 ENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVE 288
           E+         + L+  E +   K ++    + E+ P   +A       +F+ G   ++E
Sbjct: 266 ESGYFWAKKGYI-LKIQEHS--EKALDSYNNSLELNPEYDLA-------WFYKGT--ILE 313

Query: 289 QLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGL 348
           +                             G Y++A   Y  S+ E+N P++ I  +Y  
Sbjct: 314 EF----------------------------GKYDEALKAYNKSL-ELN-PNKSIV-WYNK 342

Query: 349 GQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPR 408
           G +  K+  +  AL  + K LE+ P++  TL + G IY  +GQ  KA +   KA  I+P+
Sbjct: 343 GFLLTKMQMYNEALEAYNKSLELNPEDEVTLTSKGLIYTYMGQYNKALKAYDKALNINPK 402

Query: 409 DAQAFIDLG 417
            A A+ ++ 
Sbjct: 403 YANAWYNMS 411



 Score = 47.0 bits (110), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 64/272 (23%), Positives = 112/272 (41%), Gaps = 27/272 (9%)

Query: 176 GRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV 235
            R+ D+L  + RAL+++P    A +   G     L +  +A +AF + + + P++    +
Sbjct: 44  NRHKDALNIFNRALKLNPRDVTAWK-NKGFELNTLEKHEEALEAFSKVVDIKPDDNIGWI 102

Query: 236 A--LAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTET 293
              +A+  L+  E A      E    A +I P  ++A         +  +   ++ L   
Sbjct: 103 GKGIALTALERYEEA-----TEAFDEAAKISPEDSVA---------WKSKGLSLKNLNHY 148

Query: 294 ALAV------TNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYG 347
            LA+      ++  P     +      Y     YEKA   Y  ++ EIN  +E    +  
Sbjct: 149 DLALETFKKASDLNPEDDFIWIEKGILYDGLEKYEKALESYDKAL-EINPDNET--AWIN 205

Query: 348 LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 407
            G    KL  +  AL  F K + I PDN ET    G +  +L   E A +   +A K++P
Sbjct: 206 KGHTLNKLERYEDALKAFNKAITINPDNEETWDYKGIVQEKLNLYEDALQSYNRAIKLNP 265

Query: 408 RDAQAFIDLGELL-ISSDTGAALDAFKTARTL 438
                +   G +L I   +  ALD++  +  L
Sbjct: 266 ESGYFWAKKGYILKIQEHSEKALDSYNNSLEL 297


>gi|124024098|ref|YP_001018405.1| hypothetical protein P9303_24071 [Prochlorococcus marinus str. MIT
           9303]
 gi|123964384|gb|ABM79140.1| Hypothetical protein P9303_24071 [Prochlorococcus marinus str. MIT
           9303]
          Length = 622

 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 80/312 (25%), Positives = 135/312 (43%), Gaps = 36/312 (11%)

Query: 141 KGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIR 200
           +GE++QA + ++ VL  D +N  AL    C++  + R+ D++     A+   P  P A  
Sbjct: 19  QGELDQAEAIYRQVLAVDENNFYALNFCGCIQREKKRFDDAITLLSSAVSAQPGNPDA-- 76

Query: 201 LGIGLCRYKLGQLGK-------ARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKG 253
                  Y LG + K       A   +++ L L  E  EAL  L +      E       
Sbjct: 77  ------NYNLGNVFKDAERWDEAISCYEKTLDLKAEYPEALNNLGIC---LKETEQYEHS 127

Query: 254 MEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQ--LTETALAVTNH---GPTKSHSY 308
              ++RA    P  A A   L N         L EQ   +E  ++  N     P  + +Y
Sbjct: 128 EIVLKRAISRQPRFAAAWLNLGNT--------LKEQKKYSEAIVSYRNAIEVKPDFAEAY 179

Query: 309 YNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKV 368
            NL      +G+ E+A + Y  +++   KP +    Y+ LG V    G+   A+ ++   
Sbjct: 180 LNLGNVLKEEGEVEEAIVSYRKAIE--VKP-DCAGAYFSLGLVLKGEGEVEEAIVSYRNA 236

Query: 369 LEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAA 428
           +E+ PD  E    LG++  + G +E+A    RKA ++ P   +AF+ LG +L  ++ G  
Sbjct: 237 IEVKPDFAEAYLNLGYVLKEEGDVEEAIASYRKAIEVKPDFVKAFLGLGAVL--TEKGEI 294

Query: 429 LDAFKTARTLLK 440
            DA +    L +
Sbjct: 295 DDARQVVSALFE 306



 Score = 47.4 bits (111), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 43/189 (22%), Positives = 86/189 (45%), Gaps = 15/189 (7%)

Query: 77  DVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQ 136
           D++ E    LN LG+        ET+Q E  E  I+  +  ++  R      + W+  G 
Sbjct: 102 DLKAEYPEALNNLGICLK-----ETEQYEHSE--IVLKRAISRQPRF----AAAWLNLGN 150

Query: 137 LLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCP 196
            L  + +  +A  +++  +E   D   A L    V    G   +++  Y++A++V P C 
Sbjct: 151 TLKEQKKYSEAIVSYRNAIEVKPDFAEAYLNLGNVLKEEGEVEEAIVSYRKAIEVKPDCA 210

Query: 197 GAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEK 256
           GA    +GL     G++ +A  +++ A+++ P+  EA + L  +     E   + + +  
Sbjct: 211 GAY-FSLGLVLKGEGEVEEAIVSYRNAIEVKPDFAEAYLNLGYV---LKEEGDVEEAIAS 266

Query: 257 MQRAFEIYP 265
            ++A E+ P
Sbjct: 267 YRKAIEVKP 275



 Score = 42.7 bits (99), Expect = 0.98,   Method: Compositional matrix adjust.
 Identities = 34/134 (25%), Positives = 60/134 (44%), Gaps = 5/134 (3%)

Query: 93  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 152
           Y  LG +  ++ E EE  +     Y KA  +       +   G +L  +GEVE+A  +++
Sbjct: 179 YLNLGNVLKEEGEVEEAIV----SYRKAIEVKPDCAGAYFSLGLVLKGEGEVEEAIVSYR 234

Query: 153 IVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQ 212
             +E   D   A L    V    G   +++  Y++A++V P    A  LG+G    + G+
Sbjct: 235 NAIEVKPDFAEAYLNLGYVLKEEGDVEEAIASYRKAIEVKPDFVKAF-LGLGAVLTEKGE 293

Query: 213 LGKARQAFQRALQL 226
           +  ARQ      ++
Sbjct: 294 IDDARQVVSALFEM 307



 Score = 42.0 bits (97), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 57/257 (22%), Positives = 99/257 (38%), Gaps = 51/257 (19%)

Query: 346 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKI 405
           Y LG V      +  A++ +EK L++  +  E L  LG    +  Q E ++ +L++A   
Sbjct: 78  YNLGNVFKDAERWDEAISCYEKTLDLKAEYPEALNNLGICLKETEQYEHSEIVLKRAISR 137

Query: 406 DPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKGE 463
            PR A A+++LG  L           +  A    + A E  P   E   N+G +  E+GE
Sbjct: 138 QPRFAAAWLNLGNTLKEQKK------YSEAIVSYRNAIEVKPDFAEAYLNLGNVLKEEGE 191

Query: 464 FESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWN 523
            E A  S++ A                                           +E+  +
Sbjct: 192 VEEAIVSYRKA-------------------------------------------IEVKPD 208

Query: 524 KVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVN 583
                F+L  +L+   +   A V YR  +    D+ +AYL L  + K   +++ +I    
Sbjct: 209 CAGAYFSLGLVLKGEGEVEEAIVSYRNAIEVKPDFAEAYLNLGYVLKEEGDVEEAIASYR 268

Query: 584 EALKVNGKYPNALSMLG 600
           +A++V   +  A   LG
Sbjct: 269 KAIEVKPDFVKAFLGLG 285



 Score = 41.2 bits (95), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 45/166 (27%), Positives = 74/166 (44%), Gaps = 14/166 (8%)

Query: 657 LEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDV 716
           L++A+ +Y +V+    +N YA N  G +  EK +FD +  L +    A  G+     PD 
Sbjct: 22  LDQAEAIYRQVLAVDENNFYALNFCGCIQREKKRFDDAITLLSSAVSAQPGN-----PDA 76

Query: 717 WINLAHVYFAQGNFALAMKMYQNCLR-KFYYNTDAQILLYLARTHYEAEQWQDCKKSLLR 775
             NL +V+     +  A+  Y+  L  K  Y    + L  L     E EQ++  +  L R
Sbjct: 77  NYNLGNVFKDAERWDEAISCYEKTLDLKAEY---PEALNNLGICLKETEQYEHSEIVLKR 133

Query: 776 AIHLAPSNYTLRFDAGVAM---QKFSASTLQKTRRTADEVRSTVAE 818
           AI   P       + G  +   +K+S + +  + R A EV+   AE
Sbjct: 134 AISRQPRFAAAWLNLGNTLKEQKKYSEAIV--SYRNAIEVKPDFAE 177


>gi|94967946|ref|YP_589994.1| hypothetical protein Acid345_0917 [Candidatus Koribacter versatilis
           Ellin345]
 gi|94549996|gb|ABF39920.1| Tetratricopeptide repeat protein [Candidatus Koribacter versatilis
           Ellin345]
          Length = 566

 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 95/378 (25%), Positives = 170/378 (44%), Gaps = 27/378 (7%)

Query: 106 KEEHFILATQYYNKASRID-MHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPA 164
           +++ F+ A Q + +A ++D  +EP+ +   G  LL++ +  +A  + +  +    ++V A
Sbjct: 162 QKKDFVAAQQQFEQALKLDRQYEPAHF-HLGVALLSQDKDPEAMLSLQEAVRLAPNDVAA 220

Query: 165 LLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRAL 224
                 V    G  +++L+ YK A Q     PG ++  +GL   ++G++  A  AFQ+A+
Sbjct: 221 HFFLGRVLETLGDNANALQNYKDAAQRSSEFPG-LQERLGLTAQRVGEMPTAISAFQKAI 279

Query: 225 QLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQH 284
              P+N +    L +  +QA +  G    + +  +A  + P     + YL N     G  
Sbjct: 280 AQSPQNPDLHNDLGLAFMQAGDGEG---AIREFNQALNLKPED---VGYLGN----LGAA 329

Query: 285 FLVEQLTETALAVTNH------GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKP 338
           +L  QL+E   AV N        P  +  +++LA +   K D   A      +++   K 
Sbjct: 330 YL--QLSEFDNAVDNFRKALQIAPANASLHHDLALTLKLKDDLAGAAAELREAIRLDPKL 387

Query: 339 HEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQEL 398
           ++    +Y LG    + G+F +A+   E  L   PD  E    LG +Y Q+ +  ++ E 
Sbjct: 388 YD---AHYTLGVTLWQQGEFPAAVEELEAALAQKPDYAEAYYTLGTVYKQMNKPRESAEA 444

Query: 399 LRKAAKIDPRDAQAFIDLGELL--ISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGV 456
           LR A KI P  A A   L  +L  +    GA+ +A   A    KK G +  +    N G+
Sbjct: 445 LRSALKIQPDFAGAHTTLAAVLRQLGDTAGASEEARIGAELAKKKTGMQAAV-FATNSGI 503

Query: 457 IHFEKGEFESAHQSFKDA 474
                G+ + A   F+ A
Sbjct: 504 RLLNAGDLDGAVSQFRRA 521



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 111/493 (22%), Positives = 182/493 (36%), Gaps = 111/493 (22%)

Query: 135 GQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHP- 193
           GQ LLA  + + A S ++I ++   + V A  G       +G    ++  Y+ AL+ +  
Sbjct: 89  GQALLADHQADAAISEYRIAVKMAPNEVEANRGLGRSLSTKGDLDGAIAVYRSALETNSQ 148

Query: 194 SCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKG 253
           S P    LG  L + K      A+Q F++AL+LD +   A   L V  L  ++     + 
Sbjct: 149 SAPLHDDLGSLLAQKK--DFVAAQQQFEQALKLDRQYEPAHFHLGVALLSQDKDP---EA 203

Query: 254 MEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLA- 312
           M  +Q A  + P      N +A HFF      ++E L + A A+ N        Y + A 
Sbjct: 204 MLSLQEAVRLAP------NDVAAHFFLG---RVLETLGDNANALQN--------YKDAAQ 246

Query: 313 RSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIY 372
           RS    G  E+ GL                           ++G+  +A++ F+K +   
Sbjct: 247 RSSEFPGLQERLGLTAQ------------------------RVGEMPTAISAFQKAIAQS 282

Query: 373 PDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAF 432
           P N +    LG  ++Q G  E A     +A  + P D                       
Sbjct: 283 PQNPDLHNDLGLAFMQAGDGEGAIREFNQALNLKPED----------------------- 319

Query: 433 KTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYV 492
                          +  L N+G  + +  EF++A  +F+ AL                +
Sbjct: 320 ---------------VGYLGNLGAAYLQLSEFDNAVDNFRKAL---------------QI 349

Query: 493 IDASASMLQFKDMQLFHRFEND--GNHVEL------PWNKVTVLFNLARLLEQIHDTVAA 544
             A+AS+    D+ L  + ++D  G   EL              + L   L Q  +  AA
Sbjct: 350 APANASL--HHDLALTLKLKDDLAGAAAELREAIRLDPKLYDAHYTLGVTLWQQGEFPAA 407

Query: 545 SVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLEL 604
                  L +  DY +AY  L  + K  N  + S E +  ALK+   +  A + L  +  
Sbjct: 408 VEELEAALAQKPDYAEAYYTLGTVYKQMNKPRESAEALRSALKIQPDFAGAHTTLAAVLR 467

Query: 605 KNDDWVKAKETFR 617
           +  D   A E  R
Sbjct: 468 QLGDTAGASEEAR 480



 Score = 42.0 bits (97), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 65/275 (23%), Positives = 108/275 (39%), Gaps = 62/275 (22%)

Query: 356 GDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFID 415
           GD  SAL++F++  ++ P+N E   A+G    + G+  +A    R A K+ P  A     
Sbjct: 28  GDDASALSSFQQASKLDPNNPEYQNAVGQALFKQGRPAEAIPYFRHALKLRPDLAVIHAY 87

Query: 416 LGE-LLISSDTGAALDAFKTA-------------------------------RTLLKKAG 443
           LG+ LL      AA+  ++ A                               R+ L+   
Sbjct: 88  LGQALLADHQADAAISEYRIAVKMAPNEVEANRGLGRSLSTKGDLDGAIAVYRSALETNS 147

Query: 444 EEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASML-QF 502
           +  P+   +++G +  +K +F +A Q F+ AL        LD + +        ++L Q 
Sbjct: 148 QSAPLH--DDLGSLLAQKKDFVAAQQQFEQALK-------LDRQYEPAHFHLGVALLSQD 198

Query: 503 KDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAY 562
           KD +     +     V L  N V   F L R+LE + D   A           Q+Y DA 
Sbjct: 199 KDPEAMLSLQ---EAVRLAPNDVAAHFFLGRVLETLGDNANA----------LQNYKDAA 245

Query: 563 LRLAAIAKARNNLQLSIELVNEALKVNGKYPNALS 597
            R +     +  L L+ + V       G+ P A+S
Sbjct: 246 QRSSEFPGLQERLGLTAQRV-------GEMPTAIS 273


>gi|21226280|ref|NP_632202.1| hypothetical protein MM_0178 [Methanosarcina mazei Go1]
 gi|20904523|gb|AAM29874.1| conserved protein [Methanosarcina mazei Go1]
          Length = 1711

 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 122/517 (23%), Positives = 200/517 (38%), Gaps = 97/517 (18%)

Query: 7    PVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIARE--YFKQGKVEQFRQILE 64
            P ++ EE  R+  + L + AS ++++ K E+A L L   +ARE    K+   ++   +LE
Sbjct: 1160 PEKSPEENNRICQELLEKFASALIELGKPEEALLPLE-KLAREGSASKETLYDRGIALLE 1218

Query: 65   EGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRID 124
             G   E  E ++D+    I I       +   G +   Q   EE      Q         
Sbjct: 1219 LGRQEEAFEIFSDL----IEIYPDFKKAWYGKGLVLFSQEHYEEALKALKQAVPDGEESK 1274

Query: 125  MHEPS-----TWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYS 179
            + EP      T +G  QL    G+ E A   F+ VLE +            V     +  
Sbjct: 1275 IGEPELEDALTKIGLSQL--KTGKYEDACDTFEKVLEKNPMAADIWYLSGLVMRGLDQNE 1332

Query: 180  DSLEFYKRALQVHPSCPGAIRLG----IGLCRYKLGQLGKARQAFQRALQLDPENVEALV 235
            D++E + RAL++ P    A        + LCRY+     +AR AF   L+  PEN + L 
Sbjct: 1333 DAVEAFNRALEIKPDLRAAQEQKGLALLSLCRYE-----EARDAFSSVLEESPENADVLY 1387

Query: 236  ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETAL 295
              AV   +        K +EK+                                     L
Sbjct: 1388 NRAVASFKTLNFEDAAKDLEKV-------------------------------------L 1410

Query: 296  AVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKL 355
                  P  + + Y L  +     DYE+A L  +  V E    HE     Y +  V   L
Sbjct: 1411 LFAPDSPDYTEACYMLGIASIELQDYERA-LQALDMVLEWEPEHEEAL--YNMALVLFNL 1467

Query: 356  GDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFID 415
             ++  A   FE++LE  P++ E+L  LG   ++L  +++A +   KAA  +P++ +A  +
Sbjct: 1468 EEYEEAARTFEQLLETSPEDPESLNYLGLCLLELDNLKEALKAFEKAALFNPKNEEALYN 1527

Query: 416  LGELLI------------------SSDTGAAL--------------DAFKTARTLLKKAG 443
                LI                  S D    L              +A +    +LK+  
Sbjct: 1528 AATTLIKLNRAQESLGYFDRILEISPDNLDVLNYKGVIFCMLDQYREALRAFDGVLKRDP 1587

Query: 444  EEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIW 480
            E   I+ + N+GV+ F++  +E+A ++FK+AL    W
Sbjct: 1588 EN--IKAIYNVGVVCFKQKLYETAARAFKEALSINPW 1622



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 89/335 (26%), Positives = 146/335 (43%), Gaps = 15/335 (4%)

Query: 106 KEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPAL 165
           K +++  A Q + + + +D      W+ +G LL   G+ E+A +A + +LE D D   A 
Sbjct: 246 KLQNYAEAVQSFARVTELDPENKDAWLQQGLLLARTGKHEEALNALEKLLEYDPDFTEAQ 305

Query: 166 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 225
             +  V    GR+ ++L   +++L+  P     + L  GL     G+L  A  AF+ A +
Sbjct: 306 KLRGTVLAGLGRFEEALGPLEKSLEKEPENYN-LWLQKGLILLDTGKLEPAIDAFENAAR 364

Query: 226 LDPENVEALV--ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQ 283
           L+P+N    +    A+  L+  E A     +E  +    + PY     N         G+
Sbjct: 365 LNPDNETCWMNMGFALYSLERYEEA-----LEAFKEGLRLNPYLETGWNRKGIVLGKLGK 419

Query: 284 HFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIF 343
                +  E A+ +    P    ++ N      +  + EKA   + A V +IN   E I 
Sbjct: 420 TGEALEAFEEAIKLR---PDFEDAWKNRGLLLFASEECEKAEEAF-AEVLKINP--EDID 473

Query: 344 PYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAA 403
             Y  G   LKLG   +AL   EKV+ + PD  +   +LG    +LG+ EKA E   K A
Sbjct: 474 SLYNRGISLLKLGRKETALEYLEKVVSLRPDYPDLSYSLGVALTELGEYEKALETFEKLA 533

Query: 404 KIDPRDAQAFIDLGELLIS-SDTGAALDAFKTART 437
             +P D +     G+L +   +   AL AF+   T
Sbjct: 534 SENPYDLEIQCRRGKLAMEVGNYETALQAFERILT 568



 Score = 66.2 bits (160), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 72/289 (24%), Positives = 123/289 (42%), Gaps = 45/289 (15%)

Query: 145  EQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIG 204
            E+A  A  +VLE + ++  AL   A V FN   Y ++   +++ L+  P  P ++   +G
Sbjct: 1437 ERALQALDMVLEWEPEHEEALYNMALVLFNLEEYEEAARTFEQLLETSPEDPESLNY-LG 1495

Query: 205  LCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIY 264
            LC  +L  L +A +AF++A   +P+N EAL   A   ++ N A   ++ +    R  EI 
Sbjct: 1496 LCLLELDNLKEALKAFEKAALFNPKNEEALYNAATTLIKLNRA---QESLGYFDRILEIS 1552

Query: 265  PYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 324
            P     LNY    F    Q                        Y    R++         
Sbjct: 1553 PDNLDVLNYKGVIFCMLDQ------------------------YREALRAFDGV------ 1582

Query: 325  GLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGH 384
                      + +  E I   Y +G V  K   + +A   F++ L I P + ++L+ LG 
Sbjct: 1583 ----------LKRDPENIKAIYNVGVVCFKQKLYETAARAFKEALSINPWHEQSLRYLGI 1632

Query: 385  IYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDT-GAALDAF 432
               ++G+ E+A +   K  +I+P+D Q+    G +L   +  G A+ AF
Sbjct: 1633 SLAKIGEYEEALKAFEKLLRINPQDVQSMNYRGVILGKLERFGEAIRAF 1681



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 76/334 (22%), Positives = 134/334 (40%), Gaps = 46/334 (13%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
           A + + +A ++       W  +G LL A  E E+A  AF  VL+ + +++ +L  +    
Sbjct: 423 ALEAFEEAIKLRPDFEDAWKNRGLLLFASEECEKAEEAFAEVLKINPEDIDSLYNRGISL 482

Query: 173 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 232
              GR   +LE+ ++ + + P  P  +   +G+   +LG+  KA + F++    +P ++E
Sbjct: 483 LKLGRKETALEYLEKVVSLRPDYPD-LSYSLGVALTELGEYEKALETFEKLASENPYDLE 541

Query: 233 ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTE 292
                  +   A E       ++  +R     P    A       ++  G   L  +  E
Sbjct: 542 IQCRRGKL---AMEVGNYETALQAFERILTEKPASREA-------WYRKGLALLKLENFE 591

Query: 293 TALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQ 352
            A+   +   TK               DYE AG+                      G  Q
Sbjct: 592 EAVKAFDAVATKD-------------ADYEDAGVLK--------------------GFAQ 618

Query: 353 LKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQA 412
           +KL +  SAL  FE+VLE  PD+       G I   L + E+A +    A++++P    A
Sbjct: 619 MKLKECASALETFERVLEKKPDSDTAWYYRGMILYTLQRQEEAAKAFESASRLNPGLYTA 678

Query: 413 FIDLGELLISSDTGAALDAFKTARTLLKKAGEEV 446
           F    + L   +TG    AF+    +L+K  E +
Sbjct: 679 FEYRAKCLF--ETGQYEAAFEAFEAVLEKDPENL 710



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 99/379 (26%), Positives = 167/379 (44%), Gaps = 32/379 (8%)

Query: 106 KEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNV--P 163
           K E +  A + + +A  I+  +      KG L+LAK  +E+  SA +      R+N    
Sbjct: 42  KAERYEEALENFERALEINPKDSEACYAKG-LVLAK--LEKYDSALECFDSLTRENPRNE 98

Query: 164 ALLGQACVEFNR-GRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQR 222
             L Q C+   + G+   +LE  +  L+ +P+   A+    G+   +L +  +A + F +
Sbjct: 99  NALEQKCLLLAKIGKKDLALEALEDFLKKYPANEAAL-YHKGILLSELSRYEEAEKIFSK 157

Query: 223 ALQLDPENVEALVALA---VMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFF 279
            L+LDPEN EA        V  L+ NEA      ++  + A +I P    A N      F
Sbjct: 158 VLKLDPENREAWFRKGFALVQLLRLNEA------IKAFEEAIKIDPSYFEAWN---CRCF 208

Query: 280 FTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPH 339
              +  + E+  E   ++    P     +Y+ A +     +Y +A +   A V E++  +
Sbjct: 209 ALMKLEVYEEALEAFDSMLRIYPDVKDIWYSRALALLKLQNYAEA-VQSFARVTELDPEN 267

Query: 340 EFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELL 399
           +  +   GL  +  + G    AL   EK+LE  PD  E  K  G +   LG+ E+A   L
Sbjct: 268 KDAWLQQGL--LLARTGKHEEALNALEKLLEYDPDFTEAQKLRGTVLAGLGRFEEALGPL 325

Query: 400 RKAAKIDPRDAQAFIDLGELLISSDTG---AALDAFKTARTLLKKAGEEVPIEVLNNIGV 456
            K+ + +P +   ++  G  LI  DTG    A+DAF+ A  L      E       N+G 
Sbjct: 326 EKSLEKEPENYNLWLQKG--LILLDTGKLEPAIDAFENAARL--NPDNET---CWMNMGF 378

Query: 457 IHFEKGEFESAHQSFKDAL 475
             +    +E A ++FK+ L
Sbjct: 379 ALYSLERYEEALEAFKEGL 397



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 79/340 (23%), Positives = 123/340 (36%), Gaps = 93/340 (27%)

Query: 122 RIDMHEPST---WVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRY 178
           RI   +P++   W  KG  LL     E+A  AF  V   D D   A + +   +      
Sbjct: 565 RILTEKPASREAWYRKGLALLKLENFEEAVKAFDAVATKDADYEDAGVLKGFAQMKLKEC 624

Query: 179 SDSLEFYKRALQVHPSC------------------------PGAIRLGIGL--------- 205
           + +LE ++R L+  P                            A RL  GL         
Sbjct: 625 ASALETFERVLEKKPDSDTAWYYRGMILYTLQRQEEAAKAFESASRLNPGLYTAFEYRAK 684

Query: 206 CRYKLGQLGKARQAFQRALQLDPENVEALV--ALAVMDLQAN------------------ 245
           C ++ GQ   A +AF+  L+ DPEN+ AL   A+ + +L+ N                  
Sbjct: 685 CLFETGQYEAAFEAFEAVLEKDPENLSALEKRAICLFELKKNKEAVDALSTLLESDPERK 744

Query: 246 ------EAAGIRKGME-----KMQRAFEIY----------------PYCAMALNYLANHF 278
                 E A +R G+E     + + A E++                P    ++ Y     
Sbjct: 745 DTKLRLEEAKLRLGIEYFELGQYENALELFEGINEKAEGIYEKTRDPQKPNSVLYWKGLV 804

Query: 279 FFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINK- 337
           F   + +  E+  E    +T+  P  +  +Y    S    G YE+A   +  ++ EIN  
Sbjct: 805 FIRQEAY--EKAVEAFKGITDQDPNFAEGWYFTGLSCSKLGRYEEASEAFKKAL-EINSA 861

Query: 338 ---PHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPD 374
               H+     Y LG    +LG F  AL  FEK  +  PD
Sbjct: 862 LRDTHDIC---YQLGISNFELGKFEEALKAFEKAFKTTPD 898



 Score = 48.1 bits (113), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 58/102 (56%), Gaps = 3/102 (2%)

Query: 134  KGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHP 193
            KG +     +  +A  AF  VL+ D +N+ A+     V F +  Y  +   +K AL ++P
Sbjct: 1562 KGVIFCMLDQYREALRAFDGVLKRDPENIKAIYNVGVVCFKQKLYETAARAFKEALSINP 1621

Query: 194  SCPGAIR-LGIGLCRYKLGQLGKARQAFQRALQLDPENVEAL 234
                ++R LGI L   K+G+  +A +AF++ L+++P++V+++
Sbjct: 1622 WHEQSLRYLGISLA--KIGEYEEALKAFEKLLRINPQDVQSM 1661



 Score = 45.1 bits (105), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 98/420 (23%), Positives = 159/420 (37%), Gaps = 96/420 (22%)

Query: 138  LLAKGEVEQASSAFKIVLEADRDNVPAL--LGQAC------------------------- 170
            LL  G  ++A   FK V+  D DN  AL  L  AC                         
Sbjct: 918  LLRLGRYKEAEVGFKEVIFRDSDNAEALAHLSTACFKQEHYEEALEIFEKVLSQTPERKT 977

Query: 171  VEFNR-------GRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRA 223
            V F +       G+  DSL+ +   L++ P C  A+    G   ++LG+ G+A +AF+ A
Sbjct: 978  VLFRKGVALKALGKIQDSLDIFDLVLKLKPDCSYALE-QRGYALFELGRYGEAAEAFKEA 1036

Query: 224  LQLDPEN--VEALVALAVMDLQANEAAGIRKGMEKMQRAFEI------YPYCAMALNYLA 275
            L+  P    ++ L  LA   +         + +E   +A E+       PY      Y  
Sbjct: 1037 LEYCPNKTYMQYLKGLAFFRI-----GNFTEALEGFGKALELGCQKPDIPY------YTG 1085

Query: 276  NHFFFTGQHF----LVEQLTETALAVTNHGPTKSHSYYNLAR------------------ 313
               F TG +       ++L E      +    ++ + + L R                  
Sbjct: 1086 LSCFETGDYAGALKAFDRLPEEGTQDPDVLQKRALALFELGRQEEAVSAVNFLLELSAEN 1145

Query: 314  -SYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIY 372
             +   KG+ E  G     S +E N+  + +   +    ++  LG    AL   EK+    
Sbjct: 1146 LTIGEKGN-EPEGNEPEKSPEENNRICQELLEKFASALIE--LGKPEEALLPLEKLAREG 1202

Query: 373  PDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSD-TGAALDA 431
              + ETL   G   ++LG+ E+A E+     +I P   +A+   G +L S +    AL A
Sbjct: 1203 SASKETLYDRGIALLELGRQEEAFEIFSDLIEIYPDFKKAWYGKGLVLFSQEHYEEALKA 1262

Query: 432  FKTARTLLKKAGEEVPI------EVLNNIGVIHFEKGEFESAHQSF-----KDALGDGIW 480
             K A       GEE  I      + L  IG+   + G++E A  +F     K+ +   IW
Sbjct: 1263 LKQAVP----DGEESKIGEPELEDALTKIGLSQLKTGKYEDACDTFEKVLEKNPMAADIW 1318


>gi|268315734|ref|YP_003289453.1| hypothetical protein Rmar_0157 [Rhodothermus marinus DSM 4252]
 gi|262333268|gb|ACY47065.1| TPR repeat-containing protein [Rhodothermus marinus DSM 4252]
          Length = 465

 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 79/342 (23%), Positives = 143/342 (41%), Gaps = 39/342 (11%)

Query: 129 STWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRA 188
             W+ +G LL   G  E+A  A++  L  +  +   L+       N GR+ ++L+ Y+RA
Sbjct: 73  DAWMRRGILLSHLGRHEEALQAYERALSLNPTDTETLVNLGITLDNLGRFEEALQAYERA 132

Query: 189 LQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAA 248
           LQ+ P     I   +G+   ++ +L +A QA + A +L+P++ E    L       +   
Sbjct: 133 LQIDP-LNDEIYYNLGITLERMDRLEEAVQALEEAARLNPDHPEVWYELGFC---YDRLG 188

Query: 249 GIRKGMEKMQRAFEIYPYCA-------MALNYLANH--------FFFTGQHFLVEQLTET 293
              + +    R  E+ PY A       + LN +  +        +    Q          
Sbjct: 189 DDERSLACYDRHLELDPYSADAWYNRGIVLNRMGRYREAVESYDYAIAIQEDFGSAWYNR 248

Query: 294 ALAVTNHGPTKS----------------HSYYNLARSYHSKGDYEKAGLYYMASVKEINK 337
             A+TN G  +                  +YYN+A +Y    +YE A  Y+  +++E   
Sbjct: 249 GNALTNLGDLRGAIESYEKVLEIEGGDPATYYNIALAYEELQEYETAIQYFQLALEEDPA 308

Query: 338 PHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQE 397
             E    +YGLG     L  F  A+   E+ + + P+  E   A         +++ A +
Sbjct: 309 YAE---AWYGLGCCYDALERFEEAIACMERAVTLQPETSEFWYAKADCEYNARRLQDALQ 365

Query: 398 LLRKAAKIDPRDAQAFIDLGELLISSD-TGAALDAFKTARTL 438
             R+  ++DP++  A++D  E L+ +     AL A++ A TL
Sbjct: 366 SYRRVIELDPQNRDAWLDYAETLLEAGYVEEALQAYRQALTL 407



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 89/366 (24%), Positives = 152/366 (41%), Gaps = 61/366 (16%)

Query: 173 FNRGRYSDSLEFYKRALQVHPSCPGA-IRLGIGLCRYKLGQLGKARQAFQRALQLDPENV 231
           + RGR+ D+L    R L +HP+   A +R GI L    LG+  +A QA++RAL L+P + 
Sbjct: 49  YERGRFEDALGVIDRLLALHPTASDAWMRRGILLS--HLGRHEEALQAYERALSLNPTDT 106

Query: 232 EALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFL--VEQ 289
           E LV L +     +      + ++  +RA +I P        L +  ++     L  +++
Sbjct: 107 ETLVNLGIT---LDNLGRFEEALQAYERALQIDP--------LNDEIYYNLGITLERMDR 155

Query: 290 LTETALAVTNHG---PTKSHSYYNLARSYHSKGDYEKAGLYY------------------ 328
           L E   A+       P     +Y L   Y   GD E++   Y                  
Sbjct: 156 LEEAVQALEEAARLNPDHPEVWYELGFCYDRLGDDERSLACYDRHLELDPYSADAWYNRG 215

Query: 329 -----MASVKE--------INKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDN 375
                M   +E        I    +F   +Y  G     LGD R A+ ++EKVLEI   +
Sbjct: 216 IVLNRMGRYREAVESYDYAIAIQEDFGSAWYNRGNALTNLGDLRGAIESYEKVLEIEGGD 275

Query: 376 CETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTA 435
             T   +   Y +L + E A +  + A + DP  A+A+  LG      D   AL+ F+ A
Sbjct: 276 PATYYNIALAYEELQEYETAIQYFQLALEEDPAYAEAWYGLG---CCYD---ALERFEEA 329

Query: 436 RTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDA 495
              +++A     + +        + K + E   +  +DAL     +  LD + +   +D 
Sbjct: 330 IACMERA-----VTLQPETSEFWYAKADCEYNARRLQDALQSYRRVIELDPQNRDAWLDY 384

Query: 496 SASMLQ 501
           + ++L+
Sbjct: 385 AETLLE 390



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 51/196 (26%), Positives = 84/196 (42%), Gaps = 22/196 (11%)

Query: 70  EIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPS 129
           E+D Y AD  Y R  +LN +G Y           RE       A + Y+ A  I     S
Sbjct: 202 ELDPYSADAWYNRGIVLNRMGRY-----------RE-------AVESYDYAIAIQEDFGS 243

Query: 130 TWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRAL 189
            W  +G  L   G++  A  +++ VLE +  +       A        Y  ++++++ AL
Sbjct: 244 AWYNRGNALTNLGDLRGAIESYEKVLEIEGGDPATYYNIALAYEELQEYETAIQYFQLAL 303

Query: 190 QVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAG 249
           +  P+   A   G+G C   L +  +A    +RA+ L PE  E   A A  D + N A  
Sbjct: 304 EEDPAYAEAW-YGLGCCYDALERFEEAIACMERAVTLQPETSEFWYAKA--DCEYN-ARR 359

Query: 250 IRKGMEKMQRAFEIYP 265
           ++  ++  +R  E+ P
Sbjct: 360 LQDALQSYRRVIELDP 375


>gi|406981036|gb|EKE02561.1| hypothetical protein ACD_20C00362G0010 [uncultured bacterium]
          Length = 630

 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 88/369 (23%), Positives = 159/369 (43%), Gaps = 24/369 (6%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLE--ADRDNVPALLGQAC 170
           A +Y  +A++   + P   +  GQ+ +     +++ +    +LE     D+   LL  A 
Sbjct: 93  AIEYLERAAQQVQNTPEILIQLGQMYIENQHYDKSINLINELLEKYPQLDDCYYLL--AL 150

Query: 171 VEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPEN 230
                G    ++E Y++A++++     +  L +G+  Y   QL +A +  Q AL +D  N
Sbjct: 151 NHEKTGNIPQAIENYRKAIEINSRSHKSY-LALGILYYNQKQLDEANKELQNALSIDFNN 209

Query: 231 VEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQL 290
            +    L ++    N      K + + +      P    A N L   + F G  +L E +
Sbjct: 210 TKIHFYLGLI---YNAQENFEKAIAEFKYVVTFEPKNIEAYNNLGLAYGFLG--WLEEAI 264

Query: 291 TE--TALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGL 348
            E  TA+A+    P      Y L   Y  K +Y+ A +    +++ +   HE    Y  L
Sbjct: 265 QEFKTAIAL---NPDNPEVRYALGYIYFMKKNYQYAQIELQTAIR-LKPDHEL--SYLIL 318

Query: 349 GQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPR 408
           GQV   L  F+ A+  + + L++ P+N  T   L      LG  EKA E  +K  +++P 
Sbjct: 319 GQVYAHLDRFKEAIDEYNEALKLNPNNPTTYYNLAFALNTLGMSEKATECYKKVIELNPA 378

Query: 409 DAQAFIDLGELLISS-DTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESA 467
              A++DLG +L+S+     A + F+ A       G     E   ++G+ +    E++ A
Sbjct: 379 YLSAYLDLGNILLSNGQQDFAKECFEAAINRSSNFG-----EAYYSLGLCYIRSEEYQKA 433

Query: 468 HQSFKDALG 476
              F  A+ 
Sbjct: 434 LYCFDHAIA 442



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 84/365 (23%), Positives = 149/365 (40%), Gaps = 37/365 (10%)

Query: 94  TYLGKIETKQREKEEHFILATQYYNK------------ASRIDMHEPSTWVGKGQLLLAK 141
            Y   IE   R  + +  L   YYN+            A  ID +        G +  A+
Sbjct: 164 NYRKAIEINSRSHKSYLALGILYYNQKQLDEANKELQNALSIDFNNTKIHFYLGLIYNAQ 223

Query: 142 GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 201
              E+A + FK V+  +  N+ A           G   ++++ +K A+ ++P  P  +R 
Sbjct: 224 ENFEKAIAEFKYVVTFEPKNIEAYNNLGLAYGFLGWLEEAIQEFKTAIALNPDNP-EVRY 282

Query: 202 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 261
            +G   +       A+   Q A++L P++  + + L  +    +     ++ +++   A 
Sbjct: 283 ALGYIYFMKKNYQYAQIELQTAIRLKPDHELSYLILGQVYAHLDR---FKEAIDEYNEAL 339

Query: 262 EIYPY-------CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARS 314
           ++ P         A ALN L           + E+ TE    V    P    +Y +L   
Sbjct: 340 KLNPNNPTTYYNLAFALNTLG----------MSEKATECYKKVIELNPAYLSAYLDLGNI 389

Query: 315 YHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPD 374
             S G  + A   + A+   IN+   F   YY LG   ++  +++ AL  F+  + I P+
Sbjct: 390 LLSNGQQDFAKECFEAA---INRSSNFGEAYYSLGLCYIRSEEYQKALYCFDHAIAINPN 446

Query: 375 NCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG-ELLISSDTGAALDAFK 433
             +     G IY + G +E A E + +A K+D  +A ++ DLG    I  +   A+ AFK
Sbjct: 447 LSDAYYQKGLIYKKDGNMELAIENIEQAIKLDTENAASYNDLGLAYQILGNQEKAISAFK 506

Query: 434 TARTL 438
            A  L
Sbjct: 507 KASFL 511



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 129/613 (21%), Positives = 247/613 (40%), Gaps = 67/613 (10%)

Query: 160 DNVPALLGQACVEF-NRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQ 218
           D  P +      EF N   Y  ++E+Y   L +  S    +   I  C + +    K+ +
Sbjct: 3   DKNPQIYLSKAEEFKNNKEYKTAIEYYSEILTLM-SEDFEVMEKIADCYFCINDFEKSME 61

Query: 219 AFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHF 278
            + ++LQ++   + +LV L+ +    N+     + +E+  +  +  P   + L       
Sbjct: 62  YYVKSLQINTNYINSLVGLSKVYEVINQLPEAIEYLERAAQQVQNTPEILIQL------- 114

Query: 279 FFTGQHFLVEQLTETALAVTNH----GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKE 334
              GQ ++  Q  + ++ + N      P     YY LA ++   G+  +A   Y  +++ 
Sbjct: 115 ---GQMYIENQHYDKSINLINELLEKYPQLDDCYYLLALNHEKTGNIPQAIENYRKAIEI 171

Query: 335 INKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK 394
            ++ H+    Y  LG +         A    +  L I  +N +    LG IY      EK
Sbjct: 172 NSRSHK---SYLALGILYYNQKQLDEANKELQNALSIDFNNTKIHFYLGLIYNAQENFEK 228

Query: 395 AQELLRKAAKIDPRDAQAFIDLGELLISSDTG---AALDAFKTARTLLKKAGEEVPIEVL 451
           A    +     +P++ +A+ +LG  L     G    A+  FKTA  L      + P EV 
Sbjct: 229 AIAEFKYVVTFEPKNIEAYNNLG--LAYGFLGWLEEAIQEFKTAIAL----NPDNP-EVR 281

Query: 452 NNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVI--DASASMLQFKDMQLFH 509
             +G I+F K  ++ A    + A+       L      +Y+I     A + +FK+     
Sbjct: 282 YALGYIYFMKKNYQYAQIELQTAI------RLKPDHELSYLILGQVYAHLDRFKEA---- 331

Query: 510 RFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIA 569
             +     ++L  N  T  +NLA  L  +  +  A+  Y+ ++     Y+ AYL L  I 
Sbjct: 332 -IDEYNEALKLNPNNPTTYYNLAFALNTLGMSEKATECYKKVIELNPAYLSAYLDLGNIL 390

Query: 570 KARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDS 628
            +      + E    A+  +  +  A   LG   ++++++ KA   F  A +   +  D+
Sbjct: 391 LSNGQQDFAKECFEAAINRSSNFGEAYYSLGLCYIRSEEYQKALYCFDHAIAINPNLSDA 450

Query: 629 YATLSL---GNWNYFAALRNEKRAPKLEATHL----------------EKAKELYTRVIV 669
           Y    L    + N   A+ N ++A KL+  +                 EKA   + +   
Sbjct: 451 YYQKGLIYKKDGNMELAIENIEQAIKLDTENAASYNDLGLAYQILGNQEKAISAFKKASF 510

Query: 670 QHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGN 729
               N    +  G+ L E  ++   K+   +++ A   S +    D++ NLA++Y   G+
Sbjct: 511 LDPDNSLYRHNLGIALFEGKRY---KESIVELRRAIRLSPY--NADIYFNLANIYEKIGD 565

Query: 730 FALAMKMYQNCLR 742
           +A A+  Y+N ++
Sbjct: 566 YADAVDSYENFVK 578


>gi|428219241|ref|YP_007103706.1| hypothetical protein Pse7367_3029 [Pseudanabaena sp. PCC 7367]
 gi|427991023|gb|AFY71278.1| Tetratricopeptide TPR_2 repeat-containing protein [Pseudanabaena
           sp. PCC 7367]
          Length = 1639

 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 82/341 (24%), Positives = 147/341 (43%), Gaps = 21/341 (6%)

Query: 135 GQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS 194
           G  L  KG+++ A +A++  L  + D+  A      V  +  + + ++E Y+RA+++ P 
Sbjct: 57  GIALRQKGDLDAAQAAYQKALAIEPDSAKAHYSLGNVLMDAKQLAAAIESYQRAIELDPD 116

Query: 195 CPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRK-- 252
              A    +G      GQL +A   +Q+A+  +P+  +A   L +       A G RK  
Sbjct: 117 LDSA-HFMLGYADQASGQLEQAIFHYQKAIDANPQRGDAYYNLGL-------AYGSRKQT 168

Query: 253 --GMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYN 310
              +  +++A ++ P        LA  +   G     +   E A+A+    P  + + + 
Sbjct: 169 NLAIANLEQAVQLLPNDLKIRISLAKEYKKAGNFQAAQPHYEQAIAI---DPDHAETQFQ 225

Query: 311 LARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLE 370
           L   YH     + A   Y  ++  ++  +E    Y  LG +  + GD  +A+  +E+ LE
Sbjct: 226 LGYVYHQTNQLDAAIRQYQRAIA-LDPNYELT--YSNLGAILRRQGDLEAAIAMYEQALE 282

Query: 371 IYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALD 430
           + P N   L  LG+ ++   QIE A    R+  +I P    A  DL  LL  +D  AA  
Sbjct: 283 VNPRNTSALYNLGNAFLAKHQIEDAIACYRQVVEIKPDAIHAHQDLANLLFKTDIVAART 342

Query: 431 AFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSF 471
           A   A    +      PI  L N+   + +   ++ A + F
Sbjct: 343 A---AEDYHRGCAHIDPIATLANLISTNIKSDYYDVALKYF 380


>gi|118381868|ref|XP_001024094.1| TPR Domain containing protein [Tetrahymena thermophila]
 gi|89305861|gb|EAS03849.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
          Length = 850

 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 87/367 (23%), Positives = 154/367 (41%), Gaps = 52/367 (14%)

Query: 70  EIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPS 129
           E+D  Y +    R   LN+L  Y                    A + YNKA  I+ +   
Sbjct: 31  ELDPQYTEAYCNRGVALNSLNQYQE------------------AIKNYNKALEINPNYKL 72

Query: 130 TWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRAL 189
            +  KG  L A  ++++A S +  V+E D +   A L +    FN  ++ ++L  + +AL
Sbjct: 73  AYYNKGISLQALKQLQEAISCYTKVVEIDPNYKQAHLNKGLCFFNLNQFQEALNNFNKAL 132

Query: 190 QVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQ------ 243
           Q  P    A    I L   KLGQ  +A   + +A+ LDP    A +   ++ +       
Sbjct: 133 QCDPKYSLAC-YNIALSYQKLGQSQQALTYYDKAINLDPNYKNAYLNRGLLYMNEGQKQQ 191

Query: 244 ---------------ANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFF-FTGQHFLV 287
                           N    +   ++++ +  E   +   A+    N F  +  +  L 
Sbjct: 192 ALQDFRQIIAIDPKFTNAYINVGLTLQQLGQNQEAIQHYDKAIQIDKNAFLAYYNKAILC 251

Query: 288 EQLTETALAVTNH------GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEF 341
           +QL +   A+ N+       P  S++Y N    +   G YE+A   Y   V +++  H+ 
Sbjct: 252 KQLGKNQEALNNYNKVIEINPNYSNAYLNKGSLFLFSGKYEEAIKNY-DKVIQLDPNHKQ 310

Query: 342 IFPYYGLGQVQLK-LGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLR 400
           +  YY  G + LK LG ++ ++ N+ K +++ P+NC+     G     LG+ + A +   
Sbjct: 311 V--YYNKG-ISLKALGRYQESIENYNKAIQLDPNNCKIQNNKGLALEALGKSQDALDCYN 367

Query: 401 KAAKIDP 407
           KA +IDP
Sbjct: 368 KAIQIDP 374



 Score = 45.8 bits (107), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 50/223 (22%), Positives = 95/223 (42%), Gaps = 27/223 (12%)

Query: 204 GLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEI 263
           GL +   G+  +A  ++ +A++LDP+  EA     V     N     ++ ++   +A EI
Sbjct: 10  GLTQQSQGKFQEAVNSYSKAIELDPQYTEAYCNRGVA---LNSLNQYQEAIKNYNKALEI 66

Query: 264 YPYCAMALNYLANHFFFTGQHF-LVEQLTETA---LAVTNHGPTKSHSYYNLARSYHSKG 319
            P   +A       ++  G     ++QL E       V    P    ++ N    + +  
Sbjct: 67  NPNYKLA-------YYNKGISLQALKQLQEAISCYTKVVEIDPNYKQAHLNKGLCFFNLN 119

Query: 320 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQL-----KLGDFRSALTNFEKVLEIYPD 374
            +++A       +   NK  +   P Y L    +     KLG  + ALT ++K + + P+
Sbjct: 120 QFQEA-------LNNFNKALQ-CDPKYSLACYNIALSYQKLGQSQQALTYYDKAINLDPN 171

Query: 375 NCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 417
                   G +Y+  GQ ++A +  R+   IDP+   A+I++G
Sbjct: 172 YKNAYLNRGLLYMNEGQKQQALQDFRQIIAIDPKFTNAYINVG 214


>gi|159906168|ref|YP_001549830.1| hypothetical protein MmarC6_1787 [Methanococcus maripaludis C6]
 gi|159887661|gb|ABX02598.1| TPR repeat-containing protein [Methanococcus maripaludis C6]
          Length = 543

 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 71/328 (21%), Positives = 143/328 (43%), Gaps = 14/328 (4%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
           + + Y+KA + +      W  KG  L   G  E+A   +   +E D +++ +   +    
Sbjct: 222 SIECYDKALKSNSGYSYVWYNKGLALYDMGRYEEAIGCYNRAIELDSNDIDSWNNKGLAL 281

Query: 173 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 232
           ++ GRY +++  Y RAL++  +   + +   GL    L +  +A   + + L+L+PE+ +
Sbjct: 282 YDLGRYEEAIVCYDRALELDSNYSDS-QYNKGLALQYLERYDEAIVCYDKTLELNPEDTD 340

Query: 233 ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTE 292
           +     +     +E     + +E   ++ E+ P     L    N  +  G++    Q   
Sbjct: 341 SWCNKGI---SLHEVGRYEEAIECYDKSLELNPEDVDILYNKGNSLYDLGRYEEAVQFYN 397

Query: 293 TALAVTNHGPTKSHSYYNLARSYHSKGDYEKA-GLYYMASVKEINKPHEFIFPYYGLGQV 351
            AL +     + S +++N   + H  G YE+A G Y  A     N    +       G  
Sbjct: 398 NALNIN---SSCSDAWHNKGLALHDLGKYEEAIGCYNRAIELGPNNSDSWN----NKGNS 450

Query: 352 QLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQ 411
              LG +  A+  ++K LE+ P+  +T    G    +LG+ E+A E   +A +++P D +
Sbjct: 451 LYDLGRYEEAIECYDKSLELNPNYSDTWYNKGLSLCKLGRYEEAIEYYGRALELNPSDEE 510

Query: 412 AFIDLGELLISSDTGAALDAFKTARTLL 439
           A  +LG+    +   + L+  K    ++
Sbjct: 511 A--ELGKQYAENQLNSGLNILKNVFEMI 536



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 87/371 (23%), Positives = 162/371 (43%), Gaps = 20/371 (5%)

Query: 108 EHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLG 167
           E++  + + +N A  +D ++ + W  KG +L       +A   F  VLE D +   A L 
Sbjct: 47  ENYEKSIECFNNALELDPYDKTAWFNKGYILYGIYRSNEALVCFDKVLELDPEAFDAWLY 106

Query: 168 QACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLD 227
           +    ++   Y  ++E   +AL++ P    A     G   Y L +  ++ + + RAL+L+
Sbjct: 107 KGYTYYDLDNYQKTIECLDKALELDPENLDAYYCE-GDSYYFLERYEESLECYNRALELN 165

Query: 228 PENVEALV--ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 285
           P     LV    ++  L   E A I        +A +I P  A AL+      +  G++ 
Sbjct: 166 PTYTSLLVDKGTSLHKLGRYEEAII-----CYDKALKIDPNYAYALSNKGLSLYDLGRYE 220

Query: 286 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA-GLYYMASVKEINKPHEFIFP 344
              +  + AL  +N G   S+ +YN   + +  G YE+A G Y  A   + N     I  
Sbjct: 221 ESIECYDKALK-SNSG--YSYVWYNKGLALYDMGRYEEAIGCYNRAIELDSND----IDS 273

Query: 345 YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAK 404
           +   G     LG +  A+  +++ LE+  +  ++    G     L + ++A     K  +
Sbjct: 274 WNNKGLALYDLGRYEEAIVCYDRALELDSNYSDSQYNKGLALQYLERYDEAIVCYDKTLE 333

Query: 405 IDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEF 464
           ++P D  ++ + G  L   + G   +A +     L+   E+V  ++L N G   ++ G +
Sbjct: 334 LNPEDTDSWCNKGISL--HEVGRYEEAIECYDKSLELNPEDV--DILYNKGNSLYDLGRY 389

Query: 465 ESAHQSFKDAL 475
           E A Q + +AL
Sbjct: 390 EEAVQFYNNAL 400


>gi|124024099|ref|YP_001018406.1| hypothetical protein P9303_24081 [Prochlorococcus marinus str. MIT
           9303]
 gi|123964385|gb|ABM79141.1| Hypothetical protein P9303_24081 [Prochlorococcus marinus str. MIT
           9303]
          Length = 764

 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 87/349 (24%), Positives = 152/349 (43%), Gaps = 42/349 (12%)

Query: 141 KGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIR 200
           +GE++QA + ++ VL  D +N  AL    C++  + R+ D++     A+   P  P A  
Sbjct: 19  QGELDQAEAIYRQVLAVDENNFYALNFCGCIQREKKRFDDAITLLSSAVSAQPGNPDA-- 76

Query: 201 LGIGLCRYKLGQLGK-------ARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKG 253
                  Y LG + K       A   +++ L L  E  EAL  L +      E       
Sbjct: 77  ------NYNLGNVFKDAERWDEAISCYEKTLDLKAEYPEALNNLGIC---LKETEQYEHS 127

Query: 254 MEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQ--LTETALAVTNH---GPTKSHSY 308
              ++RA    P  A A   L N         L EQ   +E  ++  N     P  + +Y
Sbjct: 128 EIVLKRAISRQPRFAAAWLNLGNT--------LKEQKKYSEAIVSYRNAIEVKPDFAEAY 179

Query: 309 YNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKV 368
            NL      +G  E+A   Y  +++   KP +    Y+ LG V    G+   A+ ++   
Sbjct: 180 LNLGNVLKEEGAVEEAIASYRKAIEV--KP-DCAGAYFSLGFVLKGEGEVEEAIVSYRNA 236

Query: 369 LEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAA 428
           +E+ PD  E    LG++  + G +E+A    R+A ++ P  A A+++LG +L        
Sbjct: 237 IEVKPDLAEAYLNLGYVLKEEGDVEEAIASYRQAIEVKPEFADAYLNLGNVLEEEGE--- 293

Query: 429 LDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDAL 475
               + A    ++A E  P  +E  +++G + +E G++ S+ + F+ AL
Sbjct: 294 ---IEEAIASYRQAIEVNPDFVEAYSDLGKLFYEGGDYMSSIEFFQKAL 339



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 67/281 (23%), Positives = 123/281 (43%), Gaps = 27/281 (9%)

Query: 346 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKI 405
           Y LG V      +  A++ +EK L++  +  E L  LG    +  Q E ++ +L++A   
Sbjct: 78  YNLGNVFKDAERWDEAISCYEKTLDLKAEYPEALNNLGICLKETEQYEHSEIVLKRAISR 137

Query: 406 DPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKGE 463
            PR A A+++LG  L           +  A    + A E  P   E   N+G +  E+G 
Sbjct: 138 QPRFAAAWLNLGNTLKEQKK------YSEAIVSYRNAIEVKPDFAEAYLNLGNVLKEEGA 191

Query: 464 FESAHQSFKDAL-----GDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHV 518
            E A  S++ A+       G + +L       +V+       + ++  + +R     N +
Sbjct: 192 VEEAIASYRKAIEVKPDCAGAYFSL------GFVLKGEG---EVEEAIVSYR-----NAI 237

Query: 519 ELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLS 578
           E+  +      NL  +L++  D   A   YR  +    ++ DAYL L  + +    ++ +
Sbjct: 238 EVKPDLAEAYLNLGYVLKEEGDVEEAIASYRQAIEVKPEFADAYLNLGNVLEEEGEIEEA 297

Query: 579 IELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAA 619
           I    +A++VN  +  A S LG L  +  D++ + E F+ A
Sbjct: 298 IASYRQAIEVNPDFVEAYSDLGKLFYEGGDYMSSIEFFQKA 338



 Score = 49.3 bits (116), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 61/291 (20%), Positives = 124/291 (42%), Gaps = 24/291 (8%)

Query: 77  DVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQ 136
           D++ E    LN LG+        ET+Q E  E  I+  +  ++  R      + W+  G 
Sbjct: 102 DLKAEYPEALNNLGICLK-----ETEQYEHSE--IVLKRAISRQPRF----AAAWLNLGN 150

Query: 137 LLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCP 196
            L  + +  +A  +++  +E   D   A L    V    G   +++  Y++A++V P C 
Sbjct: 151 TLKEQKKYSEAIVSYRNAIEVKPDFAEAYLNLGNVLKEEGAVEEAIASYRKAIEVKPDCA 210

Query: 197 GAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEK 256
           GA    +G      G++ +A  +++ A+++ P+  EA + L  +     E   + + +  
Sbjct: 211 GAY-FSLGFVLKGEGEVEEAIVSYRNAIEVKPDLAEAYLNLGYV---LKEEGDVEEAIAS 266

Query: 257 MQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYH 316
            ++A E+ P  A A   L N     G+          A+ V    P    +Y +L + ++
Sbjct: 267 YRQAIEVKPEFADAYLNLGNVLEEEGEIEEAIASYRQAIEVN---PDFVEAYSDLGKLFY 323

Query: 317 SKGDYEKAGLYYMASVKEINKPH-----EFIFPYYGLGQVQLKLGDFRSAL 362
             GDY  +  ++  ++  ++K H        F ++  GQ+   +  + + L
Sbjct: 324 EGGDYMSSIEFFQKALS-LDKNHLKSAATLGFSFFRCGQIDAAISYYSAKL 373



 Score = 44.7 bits (104), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 54/244 (22%), Positives = 103/244 (42%), Gaps = 44/244 (18%)

Query: 186 KRALQVHPSCPGA-IRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQA 244
           KRA+   P    A + LG  L   K  +  +A  +++ A+++ P+  EA + L  +    
Sbjct: 132 KRAISRQPRFAAAWLNLGNTLKEQK--KYSEAIVSYRNAIEVKPDFAEAYLNLGNV---L 186

Query: 245 NEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTK 304
            E   + + +   ++A E+ P CA A  Y +  F   G+  + E +     A+    P  
Sbjct: 187 KEEGAVEEAIASYRKAIEVKPDCAGA--YFSLGFVLKGEGEVEEAIVSYRNAIEVK-PDL 243

Query: 305 SHSYYNLARSYHSKGDYEKAGLYYMASVK------------------------------- 333
           + +Y NL      +GD E+A   Y  +++                               
Sbjct: 244 AEAYLNLGYVLKEEGDVEEAIASYRQAIEVKPEFADAYLNLGNVLEEEGEIEEAIASYRQ 303

Query: 334 --EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQ 391
             E+N   +F+  Y  LG++  + GD+ S++  F+K L +  ++ ++   LG  + + GQ
Sbjct: 304 AIEVNP--DFVEAYSDLGKLFYEGGDYMSSIEFFQKALSLDKNHLKSAATLGFSFFRCGQ 361

Query: 392 IEKA 395
           I+ A
Sbjct: 362 IDAA 365



 Score = 39.7 bits (91), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 45/166 (27%), Positives = 74/166 (44%), Gaps = 14/166 (8%)

Query: 657 LEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDV 716
           L++A+ +Y +V+    +N YA N  G +  EK +FD +  L +    A  G+     PD 
Sbjct: 22  LDQAEAIYRQVLAVDENNFYALNFCGCIQREKKRFDDAITLLSSAVSAQPGN-----PDA 76

Query: 717 WINLAHVYFAQGNFALAMKMYQNCLR-KFYYNTDAQILLYLARTHYEAEQWQDCKKSLLR 775
             NL +V+     +  A+  Y+  L  K  Y    + L  L     E EQ++  +  L R
Sbjct: 77  NYNLGNVFKDAERWDEAISCYEKTLDLKAEY---PEALNNLGICLKETEQYEHSEIVLKR 133

Query: 776 AIHLAPSNYTLRFDAGVAM---QKFSASTLQKTRRTADEVRSTVAE 818
           AI   P       + G  +   +K+S + +  + R A EV+   AE
Sbjct: 134 AISRQPRFAAAWLNLGNTLKEQKKYSEAIV--SYRNAIEVKPDFAE 177


>gi|118395435|ref|XP_001030067.1| SLEI family protein [Tetrahymena thermophila]
 gi|89284355|gb|EAR82404.1| SLEI family protein [Tetrahymena thermophila SB210]
          Length = 2406

 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 180/861 (20%), Positives = 334/861 (38%), Gaps = 176/861 (20%)

Query: 117  YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 176
            Y K   +D ++    +  G L L K + E+A   ++ +L  D     A      V F + 
Sbjct: 926  YKKVLELDPNDIDAHILLGSLYLNKPDYEKALECYQNILNIDSKQAVAYNNMGLVYFRQN 985

Query: 177  RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVA 236
                +LE++ +AL+V+P    +I    GL   K  Q  KA + + + L ++P   + L  
Sbjct: 986  IDDQALEYFNKALEVNPKYELSI-YNSGLVYEKKNQKDKALELYNQVLAINPTEKKTLAR 1044

Query: 237  LAV-------------------------------------------MDL---QANEAAGI 250
            + +                                           +DL   QA E  G+
Sbjct: 1045 MEILKKKEQEQEQKLETAKDYLDQGFKYYNQMKDEESINCYKKALELDLNYFQAYEKLGL 1104

Query: 251  --------RKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGP 302
                     + +E  ++A EI P C  A+  + N        +L +++ + A       P
Sbjct: 1105 LHKTNKKFDEAVENYKKAIEINPKCFSAMKAVMN-------LYLDKKMIKEAQEFCEFVP 1157

Query: 303  TKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSAL 362
              + +YY L R+Y  +   + A + Y  ++ +++  H  I  Y  LG   L    F  AL
Sbjct: 1158 KCTEAYYELGRTYEEQNMLDDAIVNYKKAI-QLDPSH--INSYIYLGNSYLDKLQFDLAL 1214

Query: 363  TNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS 422
             +++K++EI P        +G +Y + G  + A E  +KA  +DP    A  + G  L+ 
Sbjct: 1215 DSYKKIIEIDPKKAVAYNNVGVVYNKQGLYDAALEYYKKALDVDPHYELALFNSG--LVY 1272

Query: 423  SDTGAALDAFKTARTLLKKAGEEVPIE--VLNNIGVIHFEKGEFESAHQSFKDALGDGIW 480
               G        A     K  E  P E   LN I VI   K       Q+ KD     ++
Sbjct: 1273 EKKGEQ----DKALEFFYKTLEINPTEKKSLNRIKVIQQNK-------QTSKDDKEFSLF 1321

Query: 481  LTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVEL-------------PWNKVTV 527
              L  +  K  +  ++A    ++ + ++++ +ND   +E               ++K+ +
Sbjct: 1322 KDLFKNDKKKVL--STADDYYYEGL-VYYQQQNDDKAIECLKKALELDPNFYEAYDKLGL 1378

Query: 528  LFNLARLLEQ--IH---------------DTVAASVLYRLILFKYQDY-------VDAYL 563
            ++ + ++ ++  IH               +TV    L + ++ + +++       +D Y 
Sbjct: 1379 VYKVKKMFDESIIHYKKALELNPKFYSAMETVMNMYLDKKMIKEAKEFSEQVPKNLDTYY 1438

Query: 564  RLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDAT 623
            +LA + + +N L  SI    + L+ + KY NA   LG+  L    + +A E ++   +  
Sbjct: 1439 KLAKVYQDQNMLDESIVYYKKVLEQDSKYINAYIQLGNAYLDKPLYDQAMECYQKIIE-I 1497

Query: 624  DGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGV 683
            D   S A  ++G       LR            L++A E + + I      + +   +G+
Sbjct: 1498 DSTKSVAYNNIG----LIYLR---------QNMLDEALEQFNKAIEIDPKYVLSIYNSGL 1544

Query: 684  VLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAH--VYFAQGNFALAMKMYQNCL 741
            V  +K Q D + + + +  E              IN AH   Y        + K  Q   
Sbjct: 1545 VYEKKQQKDKALECYNKALE--------------INPAHKNSYNRISVLKKSGKQAQETD 1590

Query: 742  RKFYYNTDAQILLYLARTHYEAEQWQ--------DCKKSLLRAIHLAPSNYTLRFDA-GV 792
            ++       +I L  A+ +YE E ++        +  K L +AI L P NY   +D  G+
Sbjct: 1591 KE----EQQEINLQTAKDYYE-EGYKYYTELNDDESIKCLNKAIELDP-NYFEAYDKLGL 1644

Query: 793  AMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGFDEKKINTHVEYC 852
                     L++ R+  + ++S    +E   + F+ + A  N +L   D K IN   E+ 
Sbjct: 1645 --------VLKENRKYEEAIQSYKKAIEVNPKCFAAMQAVMNYYL---DSKMINEAKEFY 1693

Query: 853  KHLLDAAKIHREAAEREEQQN 873
             ++   A+ H       + QN
Sbjct: 1694 DYVPKCAETHYHLGRVYQDQN 1714



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 126/647 (19%), Positives = 261/647 (40%), Gaps = 108/647 (16%)

Query: 125 MHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEF 184
           M +  T   K      +  +++A   +K VLE D  NV AL     +  ++ +  +SLEF
Sbjct: 1   MEDTETLFNKALDFQKQNLIDEAIECYKKVLEVDYSNVEALYNLGLIYQSKKQLDESLEF 60

Query: 185 YKRALQVHPSCPGAIRLGIGLCR----YKLGQLGKARQAFQRALQLDPENVEALVALAVM 240
             +A++ +P+   A      +C+     +   + +A    Q+AL++DP++ +A   L   
Sbjct: 61  LNKAVEKNPNYINAY-----ICKAENYLQKKMIEEAVVCLQKALEIDPKSAKAHERLGFA 115

Query: 241 DLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 300
             + N      K ++ +++A EI P    A + L   F +  +  +++Q  +    + N 
Sbjct: 116 YKKQNLT---DKAIDCLKKAIEIDPNFTEAHHNLG--FTYESKK-MIDQAYDCYKNILNI 169

Query: 301 GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRS 360
            P    +Y +LAR+Y+                                  ++ K  D   
Sbjct: 170 DPNYVKAYISLARNYY----------------------------------IEYKTED--- 192

Query: 361 ALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 420
           ++   +K +E+  +  E  + LG+IY  + + E++ +  +KA +IDP    A  +LG L 
Sbjct: 193 SIKYLKKAIEMDQNCVEAYERLGYIYQNISKKEESIKYFKKAIEIDPNYFNAQFNLGLLY 252

Query: 421 ISSDT-GAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGI 479
                   AL  F+ A  +  K+ +       NNIG++++ K     A + FK AL    
Sbjct: 253 YQEQKDNEALTYFQKAIEINPKSSDSY-----NNIGLVYYHKDMITEALEYFKKAL---- 303

Query: 480 WLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARL-LEQI 538
                D     Y    ++ +   K   + +  E+    +E+    +  L NL  L ++Q 
Sbjct: 304 -----DVNPLYYKAHHNSGLAYAKQNLIQNAIESYKKSIEINPKFLKSLTNLGDLCVKQN 358

Query: 539 HDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSM 598
                     ++I    + + D Y +L  + + ++  + +++   + ++++ +Y NA   
Sbjct: 359 LSDEGIECFKKIIQINPKSHYD-YFQLGFLYQNKDMNEEAVKAYKKVIELSPQYTNAHIN 417

Query: 599 LGDLELKN---------------------DDWVKAKETFRAASDATDGKDSYATLSLGN- 636
           LG +  K                      + + ++ E ++   + T+  + Y  +   N 
Sbjct: 418 LGVIYFKQKMFDEAQACFKKVIQIDPNCWNAYYRSAEVYQLKGNTTEAIECYKKIIEINP 477

Query: 637 ---WNYF--AALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQF 691
               +YF  A L+  +++        ++A   Y  ++     NL A N  G V  ++  F
Sbjct: 478 KHIKSYFSLAILKTTQKS-------YDEAIACYQSILAIEEDNLDALNNLGDVYQQQNMF 530

Query: 692 DVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQ 738
           D + D F ++ +  S          + NL  +Y ++     A++ Y+
Sbjct: 531 DEALDYFKKILQLDSSYYL-----AYYNLGTIYESKNMLEEALEYYK 572



 Score = 66.6 bits (161), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 117/559 (20%), Positives = 230/559 (41%), Gaps = 66/559 (11%)

Query: 77  DVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQ 136
           +V Y  +  L  LG+ Y        KQ ++   F+      NKA   + +  + ++ K +
Sbjct: 32  EVDYSNVEALYNLGLIYQ-----SKKQLDESLEFL------NKAVEKNPNYINAYICKAE 80

Query: 137 LLLAKGEVEQASSAFKIVLEADRDNVPA--LLGQACVEFNRGRYSD-SLEFYKRALQVHP 193
             L K  +E+A    +  LE D  +  A   LG A   + +   +D +++  K+A+++ P
Sbjct: 81  NYLQKKMIEEAVVCLQKALEIDPKSAKAHERLGFA---YKKQNLTDKAIDCLKKAIEIDP 137

Query: 194 SCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA---VMDLQANEAAG- 249
           +   A    +G        + +A   ++  L +DP  V+A ++LA    ++ +  ++   
Sbjct: 138 NFTEA-HHNLGFTYESKKMIDQAYDCYKNILNIDPNYVKAYISLARNYYIEYKTEDSIKY 196

Query: 250 IRKGMEKMQRAFEIY-----------------PYCAMALNYLANHF---FFTGQHFLVEQ 289
           ++K +E  Q   E Y                  Y   A+    N+F   F  G  +  EQ
Sbjct: 197 LKKAIEMDQNCVEAYERLGYIYQNISKKEESIKYFKKAIEIDPNYFNAQFNLGLLYYQEQ 256

Query: 290 LTETALAVTNH----GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 345
               AL          P  S SY N+   Y+ K D     L Y     ++N  +      
Sbjct: 257 KDNEALTYFQKAIEINPKSSDSYNNIGLVYYHK-DMITEALEYFKKALDVNPLYYKAHHN 315

Query: 346 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKI 405
            GL   +  L   ++A+ +++K +EI P   ++L  LG + V+    ++  E  +K  +I
Sbjct: 316 SGLAYAKQNL--IQNAIESYKKSIEINPKFLKSLTNLGDLCVKQNLSDEGIECFKKIIQI 373

Query: 406 DPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFE 465
           +P+    +  LG L  + D     +A K  + +++ + +     +  N+GVI+F++  F+
Sbjct: 374 NPKSHYDYFQLGFLYQNKDMNE--EAVKAYKKVIELSPQYTNAHI--NLGVIYFKQKMFD 429

Query: 466 SAHQSFKDA--LGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWN 523
            A   FK    +    W     S  + Y +  + +    + ++ + +       +E+   
Sbjct: 430 EAQACFKKVIQIDPNCWNAYYRS-AEVYQLKGNTT----EAIECYKKI------IEINPK 478

Query: 524 KVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVN 583
            +   F+LA L         A   Y+ IL   +D +DA   L  + + +N    +++   
Sbjct: 479 HIKSYFSLAILKTTQKSYDEAIACYQSILAIEEDNLDALNNLGDVYQQQNMFDEALDYFK 538

Query: 584 EALKVNGKYPNALSMLGDL 602
           + L+++  Y  A   LG +
Sbjct: 539 KILQLDSSYYLAYYNLGTI 557



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 78/338 (23%), Positives = 130/338 (38%), Gaps = 57/338 (16%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
           A ++Y  A  +D      ++G G +  AKG  E+A   F    E D +N         + 
Sbjct: 665 AIRFYLAAIELDPKCLKPYLGLGSIYSAKGINEKALECFSKAQEIDANNAETFNSIGFMY 724

Query: 173 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 232
           +N      +L+  K+AL+++P+   AI    GL   +  Q  KA + +Q+ LQ+ P + +
Sbjct: 725 YNWKILDQALDNLKKALEINPNYELAI-YNTGLVYEQKKQNDKALECYQKVLQIKPNDKK 783

Query: 233 ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLV----E 288
           A V +     Q N+         K                  A  F+  G  + +    E
Sbjct: 784 AKVRI----FQINQKNQQEDKTPKT-----------------AKEFYQQGYKYYIQLKDE 822

Query: 289 QLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPH--------- 339
           Q  E         P    +Y  L   Y  K  +++A + +   V EIN PH         
Sbjct: 823 QSIECLQKALELDPNYYEAYDKLGLIYKEKKMFDQAIVNF-KKVLEIN-PHCLDIIKTVM 880

Query: 340 --------------------EFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 379
                               + +  YY    V      F  ++TN++KVLE+ P++ +  
Sbjct: 881 NIYLDRKMIDEAKAFYDEVPKNLDTYYEFADVYKSQNMFEESVTNYKKVLELDPNDIDAH 940

Query: 380 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 417
             LG +Y+     EKA E  +    ID + A A+ ++G
Sbjct: 941 ILLGSLYLNKPDYEKALECYQNILNIDSKQAVAYNNMG 978



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 72/313 (23%), Positives = 136/313 (43%), Gaps = 30/313 (9%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
           A + Y K   I+     ++     L   +   ++A + ++ +L  + DN+ AL     V 
Sbjct: 465 AIECYKKIIEINPKHIKSYFSLAILKTTQKSYDEAIACYQSILAIEEDNLDALNNLGDVY 524

Query: 173 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ------- 225
             +  + ++L+++K+ LQ+  S          L  Y LG + +++   + AL+       
Sbjct: 525 QQQNMFDEALDYFKKILQLDSS--------YYLAYYNLGTIYESKNMLEEALEYYKKIEE 576

Query: 226 LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA-LNYLANHFFFTGQH 284
           ++P+ +   V       Q N  +  +K M+    AFE Y     + L    +   F    
Sbjct: 577 MNPKFIATFVR------QGNVYS--QKNMQ--SEAFECYNKVKDSDLKSTFDDDLFIQTE 626

Query: 285 FLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFP 344
            +VE L E         P  + ++ NL     +    E+A  +Y+A++ E++   + + P
Sbjct: 627 IIVE-LIECYEKAIQLNPKYTQAFCNLGLLNQAIKQMEEAIRFYLAAI-ELDP--KCLKP 682

Query: 345 YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAK 404
           Y GLG +    G    AL  F K  EI  +N ET  ++G +Y     +++A + L+KA +
Sbjct: 683 YLGLGSIYSAKGINEKALECFSKAQEIDANNAETFNSIGFMYYNWKILDQALDNLKKALE 742

Query: 405 IDPRDAQAFIDLG 417
           I+P    A  + G
Sbjct: 743 INPNYELAIYNTG 755



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 77/352 (21%), Positives = 146/352 (41%), Gaps = 48/352 (13%)

Query: 80   YERIAILNAL-GVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLL 138
            Y++I  +N    V Y  +G +  KQ+  ++    A +YYNKA  +D +   ++   G + 
Sbjct: 2029 YQKIIQINPQKAVAYNNIGLVHYKQKMDDK----AIEYYNKALELDPNYDLSYYNSGLVY 2084

Query: 139  LAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDS----------------- 181
              K + ++A   +K VL+ +  +   L     ++ N G   D+                 
Sbjct: 2085 EQKKDFDKALECYKKVLQINPKDKKTLNRINLIKKNNGDKIDNQAQEDEGSEPEDYDDDY 2144

Query: 182  --LEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAV 239
               +  K+ LQ             G   Y   +  +  +  ++A+++DP+  EA   L +
Sbjct: 2145 EDGDEQKKDLQTAED-----YYNQGFKYYNQMKDQECIKCLKKAIEIDPKYSEAYDKLGL 2199

Query: 240  MDLQANEAAGIRKGMEKMQRAFEIYPY---CAMALNYLANHFFFTGQHFLVEQLTETALA 296
            +     E     + +E  ++A E  P    C  AL  +          ++ +++T+ A  
Sbjct: 2200 V---YEENEQFEEAIECYKKAIEHKPNNLDCISALMTI----------YINQKMTDEAKE 2246

Query: 297  VTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLG 356
              N     +  YY L R Y  K   ++A     +  K I    +++  Y  LG +  +  
Sbjct: 2247 FYNSVSQSADIYYELGRVYEDKSMVDEA---ISSHKKAIELDPKYVNSYIQLGNIYSEKA 2303

Query: 357  DFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPR 408
             +  A+  F+K+LEI P+N      +G IY   G+ ++A E   KA +I+P+
Sbjct: 2304 SYEQAIEYFQKILEIEPNNEIAYNNIGLIYYDQGKYDQALEQYNKALEINPK 2355



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 86/417 (20%), Positives = 166/417 (39%), Gaps = 75/417 (17%)

Query: 113  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
            A  Y+ KA  +D    + ++  G L L K E +QA   ++ +++ +     A      V 
Sbjct: 1991 AIDYFQKAIELDPLYINAYIELGNLYLGKAEYDQALECYQKIIQINPQKAVAYNNIGLVH 2050

Query: 173  FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 232
            + +     ++E+Y +AL++ P+   +     GL   +     KA + +++ LQ++P++ +
Sbjct: 2051 YKQKMDDKAIEYYNKALELDPNYDLSY-YNSGLVYEQKKDFDKALECYKKVLQINPKDKK 2109

Query: 233  ALVALAV--------MDLQANEAAGI---------------------------------- 250
             L  + +        +D QA E  G                                   
Sbjct: 2110 TLNRINLIKKNNGDKIDNQAQEDEGSEPEDYDDDYEDGDEQKKDLQTAEDYYNQGFKYYN 2169

Query: 251  ----RKGMEKMQRAFEIYP-----YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG 301
                ++ ++ +++A EI P     Y  + L Y  N  F        E+  E       H 
Sbjct: 2170 QMKDQECIKCLKKAIEIDPKYSEAYDKLGLVYEENEQF--------EEAIECYKKAIEHK 2221

Query: 302  PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSA 361
            P        L   Y ++   ++A  +Y +  +  +        YY LG+V         A
Sbjct: 2222 PNNLDCISALMTIYINQKMTDEAKEFYNSVSQSAD-------IYYELGRVYEDKSMVDEA 2274

Query: 362  LTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLI 421
            +++ +K +E+ P    +   LG+IY +    E+A E  +K  +I+P +  A+ ++G  LI
Sbjct: 2275 ISSHKKAIELDPKYVNSYIQLGNIYSEKASYEQAIEYFQKILEIEPNNEIAYNNIG--LI 2332

Query: 422  SSDTGAALDAFKTARTLLKKAGEEVPIEVLN--NIGVIHFEKGEFESAHQSFKDALG 476
              D G     +  A     KA E  P   L+  N G+++ +K ++E A + +   L 
Sbjct: 2333 YYDQG----KYDQALEQYNKALEINPKYELSLYNSGLVYEKKDQYEKALEFYNKVLS 2385



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 82/413 (19%), Positives = 169/413 (40%), Gaps = 50/413 (12%)

Query: 94  TYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKI 153
           T LG +  KQ   +E      + + K  +I+      +   G L   K   E+A  A+K 
Sbjct: 348 TNLGDLCVKQNLSDE----GIECFKKIIQINPKSHYDYFQLGFLYQNKDMNEEAVKAYKK 403

Query: 154 VLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQL 213
           V+E       A +    + F +  + ++   +K+ +Q+ P+C  A      + + K G  
Sbjct: 404 VIELSPQYTNAHINLGVIYFKQKMFDEAQACFKKVIQIDPNCWNAYYRSAEVYQLK-GNT 462

Query: 214 GKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNY 273
            +A + +++ ++++P+++++  +LA++           + +   Q    I      ALN 
Sbjct: 463 TEAIECYKKIIEINPKHIKSYFSLAIL---KTTQKSYDEAIACYQSILAIEEDNLDALNN 519

Query: 274 LANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK 333
           L + +    Q  + ++  +    +     +   +YYNL   Y SK   E+A  YY   ++
Sbjct: 520 LGDVY---QQQNMFDEALDYFKKILQLDSSYYLAYYNLGTIYESKNMLEEALEYY-KKIE 575

Query: 334 EINKPHEFIFPYYGLGQV---------------QLKLGDFRSALTN-------------- 364
           E+N   +FI  +   G V               ++K  D +S   +              
Sbjct: 576 EMNP--KFIATFVRQGNVYSQKNMQSEAFECYNKVKDSDLKSTFDDDLFIQTEIIVELIE 633

Query: 365 -FEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISS 423
            +EK +++ P   +    LG +   + Q+E+A      A ++DP+  + ++ LG +  + 
Sbjct: 634 CYEKAIQLNPKYTQAFCNLGLLNQAIKQMEEAIRFYLAAIELDPKCLKPYLGLGSIYSAK 693

Query: 424 DTG-AALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
                AL+ F  A+ +          E  N+IG +++     + A  + K AL
Sbjct: 694 GINEKALECFSKAQEIDANNA-----ETFNSIGFMYYNWKILDQALDNLKKAL 741



 Score = 56.2 bits (134), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 70/319 (21%), Positives = 131/319 (41%), Gaps = 37/319 (11%)

Query: 113  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
            A + ++KA  ID +   T+   G +      ++QA    K  LE + +   A+     V 
Sbjct: 699  ALECFSKAQEIDANNAETFNSIGFMYYNWKILDQALDNLKKALEINPNYELAIYNTGLVY 758

Query: 173  FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKAR--------------- 217
              + +   +LE Y++ LQ+ P+   A ++ I     K  Q  K                 
Sbjct: 759  EQKKQNDKALECYQKVLQIKPNDKKA-KVRIFQINQKNQQEDKTPKTAKEFYQQGYKYYI 817

Query: 218  --------QAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAM 269
                    +  Q+AL+LDP   EA   L ++     E     + +   ++  EI P+C  
Sbjct: 818  QLKDEQSIECLQKALELDPNYYEAYDKLGLI---YKEKKMFDQAIVNFKKVLEINPHCLD 874

Query: 270  ALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYM 329
             +  + N        +L  ++ + A A  +  P    +YY  A  Y S+  +E++   Y 
Sbjct: 875  IIKTVMN-------IYLDRKMIDEAKAFYDEVPKNLDTYYEFADVYKSQNMFEESVTNY- 926

Query: 330  ASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQL 389
              V E++ P++ I  +  LG + L   D+  AL  ++ +L I          +G +Y + 
Sbjct: 927  KKVLELD-PND-IDAHILLGSLYLNKPDYEKALECYQNILNIDSKQAVAYNNMGLVYFRQ 984

Query: 390  GQIEKAQELLRKAAKIDPR 408
               ++A E   KA +++P+
Sbjct: 985  NIDDQALEYFNKALEVNPK 1003



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 134/729 (18%), Positives = 271/729 (37%), Gaps = 125/729 (17%)

Query: 117  YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 176
            Y  A  +D      ++  G   L K   +QA   +K +LE D     A      V F++ 
Sbjct: 1723 YQNAIELDSKYIDAYIQLGNAYLDKPMFDQALETYKKILEIDPQKPVAYNNIGLVYFDQN 1782

Query: 177  RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVA 236
               ++LE + +AL+++P    ++    GL   +  Q  KA + + + L+++P    +L  
Sbjct: 1783 MNDEALEQFNKALEINPKYELSL-YNSGLAYERKNQTEKALECYNKVLEINPTESRSLAR 1841

Query: 237  LAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALA 296
               +  + N +      ++ +Q  F        +    A   F    H+ ++   + ++ 
Sbjct: 1842 KIALLKKNNSSNTGFDFLKDLQDKF------GPSYKSTAEEKFNQAFHYYMQMEDDKSIE 1895

Query: 297  VTNHG----PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQ 352
                     P    +Y  L   Y  K  +++A  +Y   +K   K  E I     + Q +
Sbjct: 1896 CLKKAIEIDPNYYAAYEMLGFVYSKKKKFDEAIEFYQKGIKVNPKGMECIRSLVKIYQDK 1955

Query: 353  LKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQA 412
                + +       K LE Y +       L  IY +    E+A +  +KA ++DP    A
Sbjct: 1956 NMENEAKEFFNQIPKYLETYYE-------LATIYSECKMTEEAIDYFQKAIELDPLYINA 2008

Query: 413  FIDLGELLIS-SDTGAALDAFKTARTL---------------LKKAGEEVPIEVLN---- 452
            +I+LG L +  ++   AL+ ++    +                K+  ++  IE  N    
Sbjct: 2009 YIELGNLYLGKAEYDQALECYQKIIQINPQKAVAYNNIGLVHYKQKMDDKAIEYYNKALE 2068

Query: 453  ----------NIGVIHFEKGEFESAHQSFKDAL----GDGIWLTLLD--SKTKTYVIDAS 496
                      N G+++ +K +F+ A + +K  L     D   L  ++   K     ID  
Sbjct: 2069 LDPNYDLSYYNSGLVYEQKKDFDKALECYKKVLQINPKDKKTLNRINLIKKNNGDKIDNQ 2128

Query: 497  AS-----------------MLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIH 539
            A                    Q KD+Q    + N G                 +   Q+ 
Sbjct: 2129 AQEDEGSEPEDYDDDYEDGDEQKKDLQTAEDYYNQG----------------FKYYNQMK 2172

Query: 540  DTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSML 599
            D      L + I      Y +AY +L  + +     + +IE   +A++      + +S L
Sbjct: 2173 DQECIKCLKKAIEID-PKYSEAYDKLGLVYEENEQFEEAIECYKKAIEHKPNNLDCISAL 2231

Query: 600  GDLELKNDDWVKAKETFRAASDATD-----GKDSYATLSLGNWNYFAALRNEKRAPKLEA 654
              + +      +AKE + + S + D     G+  Y   S+ +     A+ + K+A +L+ 
Sbjct: 2232 MTIYINQKMTDEAKEFYNSVSQSADIYYELGR-VYEDKSMVD----EAISSHKKAIELDP 2286

Query: 655  THLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMP 714
             ++    +L                  G + +EK  ++ + + F ++ E    +      
Sbjct: 2287 KYVNSYIQL------------------GNIYSEKASYEQAIEYFQKILEIEPNNEIA--- 2325

Query: 715  DVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYE-AEQWQDCKKSL 773
              + N+  +Y+ QG +  A++ Y   L     N   ++ LY +   YE  +Q++   +  
Sbjct: 2326 --YNNIGLIYYDQGKYDQALEQYNKALE---INPKYELSLYNSGLVYEKKDQYEKALEFY 2380

Query: 774  LRAIHLAPS 782
             + + + P+
Sbjct: 2381 NKVLSINPT 2389



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 31/122 (25%), Positives = 61/122 (50%), Gaps = 1/122 (0%)

Query: 119  KASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRY 178
            KA  +D    ++++  G +   K   EQA   F+ +LE + +N  A      + +++G+Y
Sbjct: 2280 KAIELDPKYVNSYIQLGNIYSEKASYEQAIEYFQKILEIEPNNEIAYNNIGLIYYDQGKY 2339

Query: 179  SDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA 238
              +LE Y +AL+++P    ++    GL   K  Q  KA + + + L ++P    +L  + 
Sbjct: 2340 DQALEQYNKALEINPKYELSL-YNSGLVYEKKDQYEKALEFYNKVLSINPTERRSLNRIK 2398

Query: 239  VM 240
            +M
Sbjct: 2399 LM 2400


>gi|428317844|ref|YP_007115726.1| serine/threonine protein kinase with TPR repeats [Oscillatoria
           nigro-viridis PCC 7112]
 gi|428241524|gb|AFZ07310.1| serine/threonine protein kinase with TPR repeats [Oscillatoria
           nigro-viridis PCC 7112]
          Length = 710

 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 82/327 (25%), Positives = 139/327 (42%), Gaps = 34/327 (10%)

Query: 117 YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 176
           Y++A  +       W G+G  L    + ++A ++F   L+   D   A  G+  V  +  
Sbjct: 403 YDRAIELKPEYLEAWTGRGYALEKLQQSQEAIASFDNALKIQPDYAAAWEGRGDVLLDSQ 462

Query: 177 RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVA 236
           RY +++  Y++A+Q  P+  GA     G    KL Q  +A +++Q+A+++  +N EA   
Sbjct: 463 RYEEAIASYEKAVQFQPNLYGAW-YNRGQAHQKLKQYDRAVESYQKAVEIKFDNYEAWYN 521

Query: 237 LAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALA 296
           L  + L+ N          K Q AFE Y             ++  G   L  +  E A+ 
Sbjct: 522 LGNVFLELN----------KNQEAFEAYEKAVRFQPNFYQGWYSKGIALLKMRRHEEAVE 571

Query: 297 VTNHG----PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQ 352
                    P    ++YNL  SYH    YE+A   Y  ++ ++N P E+   +Y  G  Q
Sbjct: 572 AYEKAVKLKPDYYQAWYNLGWSYHELRKYEQAIECYNRAL-DLN-PKEYQ-AWYNRGNAQ 628

Query: 353 LKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQA 412
             L  +  AL ++ + + + PD  E   + G+  V + + E A     KA +  P     
Sbjct: 629 SNLKRYEDALVSYNEAVYVKPDYSEAWYSRGNALVAVKRYEDAIASYDKAIRYKP----- 683

Query: 413 FIDLGELLISSDTGAALDAFKTARTLL 439
                      D GAA++A K A + L
Sbjct: 684 -----------DYGAAMEAKKRAESQL 699



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 68/294 (23%), Positives = 120/294 (40%), Gaps = 50/294 (17%)

Query: 161 NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAF 220
           N   L  +    +N  R+ ++L  Y+RA+ + P     +        YKL +  +++ A+
Sbjct: 345 NATDLYNRGNTLYNLSRFEEALAAYERAITLRPDY-AEVWQEKAKTLYKLKKYQESQAAY 403

Query: 221 QRALQLDPENVEALVA--LAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHF 278
            RA++L PE +EA      A+  LQ ++ A     +     A +I P  A A       +
Sbjct: 404 DRAIELKPEYLEAWTGRGYALEKLQQSQEA-----IASFDNALKIQPDYAAA-------W 451

Query: 279 FFTGQHFLVEQLTETALA----VTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK- 333
              G   L  Q  E A+A         P    ++YN  +++     Y++A   Y  +V+ 
Sbjct: 452 EGRGDVLLDSQRYEEAIASYEKAVQFQPNLYGAWYNRGQAHQKLKQYDRAVESYQKAVEI 511

Query: 334 ----------------EINKPHE--------------FIFPYYGLGQVQLKLGDFRSALT 363
                           E+NK  E              F   +Y  G   LK+     A+ 
Sbjct: 512 KFDNYEAWYNLGNVFLELNKNQEAFEAYEKAVRFQPNFYQGWYSKGIALLKMRRHEEAVE 571

Query: 364 NFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 417
            +EK +++ PD  +    LG  Y +L + E+A E   +A  ++P++ QA+ + G
Sbjct: 572 AYEKAVKLKPDYYQAWYNLGWSYHELRKYEQAIECYNRALDLNPKEYQAWYNRG 625


>gi|229593982|ref|XP_001025913.2| TPR Domain containing protein [Tetrahymena thermophila]
 gi|225567182|gb|EAS05668.2| TPR Domain containing protein [Tetrahymena thermophila SB210]
          Length = 804

 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 81/374 (21%), Positives = 164/374 (43%), Gaps = 16/374 (4%)

Query: 103 QREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNV 162
           Q++K   + LA Q+ +   +I  +  + W   G          ++  +++  LE +    
Sbjct: 342 QKKKAHQWYLAYQFISICCQIQQNNETYWHYLGYTQNELNFFSESIKSYQKCLEINPKKD 401

Query: 163 PALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQR 222
              +  A     +G   ++++ YK+ L+++P    +    +G+     G L +A +A+Q+
Sbjct: 402 ICFMNLAIAYKEKGMIDEAIKSYKKCLEINPK-EDSCYYNLGIAYKDKGMLDEAIKAYQK 460

Query: 223 ALQLDPENVEALVALAVMDLQANEAAG-IRKGMEKMQRAFEIYPYCAMALNYLANHFFFT 281
            L+++P+       L +    A +A G I + ++  Q+  EI P     L+ L   +   
Sbjct: 461 CLEINPKKEICFYNLGI----AYKAKGLIDEAIQSYQKCLEINPEKDTCLHNLGIAYKAK 516

Query: 282 GQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEF 341
           G   L+++  ++        P K   Y NL  +Y  KG   +A   Y   + EIN   + 
Sbjct: 517 G---LLDEAIKSYQKCIEINPKKDIYYMNLGLAYMEKGMLNEAIKQYQKCI-EINPKEDS 572

Query: 342 IFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRK 401
              Y+ LG      G    A+ +++K +EI P +   L  LG  Y   G +++A +  +K
Sbjct: 573 C--YFNLGIAYENKGMSGEAIKSYQKCVEINPQHDSCLYNLGIAYKAKGMLDEAIKSYQK 630

Query: 402 AAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEK 461
             +I+P+      +LG  +     G   +A K+    L+   +     +  N+G+ +++K
Sbjct: 631 CLEINPKKDICLYNLG--IAYKAKGVYDEAIKSYYKCLEINPKHDNCHM--NLGLTYYDK 686

Query: 462 GEFESAHQSFKDAL 475
           G  + A +S++  L
Sbjct: 687 GMLDDAIKSYQKCL 700



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 84/371 (22%), Positives = 156/371 (42%), Gaps = 28/371 (7%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
           A + Y K   I+  E S +   G     KG +++A  A++  LE +              
Sbjct: 420 AIKSYKKCLEINPKEDSCYYNLGIAYKDKGMLDEAIKAYQKCLEINPKKEICFYNLGIAY 479

Query: 173 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 232
             +G   ++++ Y++ L+++P     +   +G+     G L +A +++Q+ ++++P+   
Sbjct: 480 KAKGLIDEAIQSYQKCLEINPEKDTCLH-NLGIAYKAKGLLDEAIKSYQKCIEINPKKDI 538

Query: 233 ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYP---YCAMALNYLANHFFFTGQHFLVEQ 289
             + L +  +   E   + + +++ Q+  EI P    C   L     +   +G+     Q
Sbjct: 539 YYMNLGLAYM---EKGMLNEAIKQYQKCIEINPKEDSCYFNLGIAYENKGMSGEAIKSYQ 595

Query: 290 LTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLG 349
                       P      YNL  +Y +KG  ++A   Y   + EIN   +     Y LG
Sbjct: 596 ------KCVEINPQHDSCLYNLGIAYKAKGMLDEAIKSYQKCL-EINPKKDICL--YNLG 646

Query: 350 QVQLKLGDFRSALTNFEKVLEIYP--DNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 407
                 G +  A+ ++ K LEI P  DNC     LG  Y   G ++ A +  +K  KI+P
Sbjct: 647 IAYKAKGVYDEAIKSYYKCLEINPKHDNCHM--NLGLTYYDKGMLDDAIKSYQKCLKINP 704

Query: 408 RDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIE--VLNNIGVIHFEKGEFE 465
           +    +++LG   I+      L+    A    +K  E  P +     N+G+ +  KG  +
Sbjct: 705 KHDICYMNLG---IAYKGKGMLE---EAIQFYQKCLEINPKKDSCYYNLGIAYKAKGMMD 758

Query: 466 SAHQSFKDALG 476
            A QS+K  L 
Sbjct: 759 KAIQSYKKCLS 769



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 68/307 (22%), Positives = 138/307 (44%), Gaps = 16/307 (5%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEAD--RDNVPALLGQAC 170
           A Q Y K   I+  + +     G    AKG +++A  +++  +E +  +D     LG A 
Sbjct: 488 AIQSYQKCLEINPEKDTCLHNLGIAYKAKGLLDEAIKSYQKCIEINPKKDIYYMNLGLAY 547

Query: 171 VEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPEN 230
           +E  +G  +++++ Y++ ++++P    +    +G+     G  G+A +++Q+ ++++P++
Sbjct: 548 ME--KGMLNEAIKQYQKCIEINPK-EDSCYFNLGIAYENKGMSGEAIKSYQKCVEINPQH 604

Query: 231 VEALVALAVMDLQANEAAG-IRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQ 289
              L  L +    A +A G + + ++  Q+  EI P   + L  L   +   G   + ++
Sbjct: 605 DSCLYNLGI----AYKAKGMLDEAIKSYQKCLEINPKKDICLYNLGIAYKAKG---VYDE 657

Query: 290 LTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLG 349
             ++        P   + + NL  +Y+ KG  + A   Y   +K IN  H+    Y  LG
Sbjct: 658 AIKSYYKCLEINPKHDNCHMNLGLTYYDKGMLDDAIKSYQKCLK-INPKHDIC--YMNLG 714

Query: 350 QVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRD 409
                 G    A+  ++K LEI P        LG  Y   G ++KA +  +K   ++P  
Sbjct: 715 IAYKGKGMLEEAIQFYQKCLEINPKKDSCYYNLGIAYKAKGMMDKAIQSYKKCLSLNPNH 774

Query: 410 AQAFIDL 416
                +L
Sbjct: 775 KNCLKNL 781


>gi|449104715|ref|ZP_21741453.1| hypothetical protein HMPREF9730_02350 [Treponema denticola AL-2]
 gi|449119577|ref|ZP_21755973.1| hypothetical protein HMPREF9725_01438 [Treponema denticola H1-T]
 gi|449121968|ref|ZP_21758314.1| hypothetical protein HMPREF9727_01074 [Treponema denticola MYR-T]
 gi|448949409|gb|EMB30234.1| hypothetical protein HMPREF9727_01074 [Treponema denticola MYR-T]
 gi|448950567|gb|EMB31389.1| hypothetical protein HMPREF9725_01438 [Treponema denticola H1-T]
 gi|448962851|gb|EMB43537.1| hypothetical protein HMPREF9730_02350 [Treponema denticola AL-2]
          Length = 415

 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 91/346 (26%), Positives = 152/346 (43%), Gaps = 21/346 (6%)

Query: 138 LLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPG 197
           LL    + +A + FK +LE D  N  AL+G    E    +++++++FYK+ L+ HPS   
Sbjct: 70  LLKGNSITEAINVFKKILELDPTNNYALVGLGDAERKNNKFNEAIKFYKQCLEHHPSNNY 129

Query: 198 AIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKM 257
           A+  G+  C   + Q  KA   ++  L+ D +N+  L  +A    +  E     K  +  
Sbjct: 130 AL-FGLADCYKSMNQFPKAIAIWEEYLKFDDKNITVLTRVADAYRKTKE---FEKAEKLY 185

Query: 258 QRAFEIYPYCAMALNYLA--NHFFFTGQHFLV--EQLTETALAVTNHGPTKSHSYYNLAR 313
           Q+  E  P  A AL  L   N+ F   +  LV  E++ E++  + +     S     +  
Sbjct: 186 QKVLEKSPKNAYALIGLGHLNYDFKKYREALVYWEKVMESSGELVDIRILTS-----IGN 240

Query: 314 SYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYP 373
            Y     +++ G+YY     E   P  F +  +GL      L    +++  ++K+LE+ P
Sbjct: 241 CYRKMKLFDR-GVYYFERALE-RSPDNF-YGLFGLADCYRGLNQQYNSIVYWKKILELDP 297

Query: 374 DNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFK 433
           +N   L  +G  Y  +   EKA+E  +KA  ID  D+ A + L    I        D   
Sbjct: 298 NNKVILTRIGDAYRSMNDFEKAKESYQKALDID-FDSYAMLGLA---ILCKLQQKYDQAI 353

Query: 434 TARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGI 479
           T  T LK  G +    V   +   + EK E + A ++  D    GI
Sbjct: 354 TTLTHLKDTG-DTNYRVYLELAQCYIEKKEKQKAIETLIDFQKLGI 398


>gi|388841092|gb|AFK79142.1| hypothetical protein PCC8801_1300 [uncultured bacterium F39-01]
          Length = 645

 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 102/443 (23%), Positives = 184/443 (41%), Gaps = 88/443 (19%)

Query: 109 HFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK--IVLEADRDNVPALL 166
            F  A   Y  A ++   +   +   G       +  +A+ AF   I L+AD  +    L
Sbjct: 130 QFAQAITAYENALKVTPQDAVIYNNLGAAYFGLNKNNEAAQAFSKSIALKADDADAYFNL 189

Query: 167 GQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQL 226
           G A    ++  + D+L+ +K A+++ P   G     IG     +     A +A+Q+A++L
Sbjct: 190 GIAYSSMDK--FDDALKAFKDAVRIKPGW-GEAHNAIGDTYLGMSNFQDAARAYQQAVRL 246

Query: 227 DPEN--------------------VEALV---------ALAVMDLQAN--EAAGIRKGME 255
           +P N                    +EAL          A+A  +L A+  +A   ++ +E
Sbjct: 247 EPTNSTAYSNLGYALDRLGRSNDSIEALRNAVRLKGDDAVAYNNLGASLYKAGRYQEAIE 306

Query: 256 KMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSY 315
               A  + P    ALN L   ++ T Q+    Q  + A+ V    P    + YNL  +Y
Sbjct: 307 AFGNAVRLNPNDVEALNNLGAAYYVTAQYDRALQNFQQAVRVKADSP---DAQYNLGNAY 363

Query: 316 HSKGDYEKAGLYYMASVK---------------------------EINKP----HEFIFP 344
           +  G Y +A   Y  +++                           E+N+      +    
Sbjct: 364 YMTGKYREATAAYRQAIQLKADYVEARTNLGSLLIALGENQEAITELNESIRLRRDNPVA 423

Query: 345 YYGLGQVQLKLGD----------FRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK 394
           +  LG   +KLG+          FR A+ ++++ L + PD  + L  LG +Y +LGQ ++
Sbjct: 424 HNNLGYANVKLGESLAPAAATEYFRRAVDSYQEALRLRPDYIKALNNLGAVYNKLGQYQE 483

Query: 395 AQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLN 452
           A ++LR+A + +   A+A  +LG  L +         F  A T L++A    P   E  N
Sbjct: 484 AVDVLRRAVQGNADFAEAQYNLGTALYNRGQ------FNEAVTSLQQAVRLKPDYAEAYN 537

Query: 453 NIGVIHFEKGEFESAHQSFKDAL 475
           ++G   ++  +F+ A +++K AL
Sbjct: 538 SLGSALYKAQQFDPAIEAYKKAL 560



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 109/510 (21%), Positives = 195/510 (38%), Gaps = 68/510 (13%)

Query: 275 ANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKE 334
            N ++  GQ        E AL VT   P  +  Y NL  +Y       +A     A  K 
Sbjct: 122 GNTYYDLGQFAQAITAYENALKVT---PQDAVIYNNLGAAYFGLNKNNEAA---QAFSKS 175

Query: 335 INKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK 394
           I    +    Y+ LG     +  F  AL  F+  + I P   E   A+G  Y+ +   + 
Sbjct: 176 IALKADDADAYFNLGIAYSSMDKFDDALKAFKDAVRIKPGWGEAHNAIGDTYLGMSNFQD 235

Query: 395 AQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNI 454
           A    ++A +++P ++ A+ +LG  L     G + D+ +  R  ++  G++      NN+
Sbjct: 236 AARAYQQAVRLEPTNSTAYSNLGYAL--DRLGRSNDSIEALRNAVRLKGDDA--VAYNNL 291

Query: 455 GVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQF-KDMQLFHRFEN 513
           G   ++ G ++ A ++F    G+ + L   D +    +  A     Q+ + +Q F +   
Sbjct: 292 GASLYKAGRYQEAIEAF----GNAVRLNPNDVEALNNLGAAYYVTAQYDRALQNFQQ--- 344

Query: 514 DGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARN 573
               V +  +     +NL            A+  YR  +    DYV+A   L ++  A  
Sbjct: 345 ---AVRVKADSPDAQYNLGNAYYMTGKYREATAAYRQAIQLKADYVEARTNLGSLLIALG 401

Query: 574 NLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLS 633
             Q +I  +NE++++    P A + LG                            YA + 
Sbjct: 402 ENQEAITELNESIRLRRDNPVAHNNLG----------------------------YANVK 433

Query: 634 LGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDV 693
           LG          E  AP     +  +A + Y   +      + A N  G V  + GQ+  
Sbjct: 434 LG----------ESLAPAAATEYFRRAVDSYQEALRLRPDYIKALNNLGAVYNKLGQYQE 483

Query: 694 SKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLR-KFYYNTDAQI 752
           + D+   ++ A  G+      +   NL    + +G F  A+   Q  +R K  Y   A+ 
Sbjct: 484 AVDV---LRRAVQGN--ADFAEAQYNLGTALYNRGQFNEAVTSLQQAVRLKPDY---AEA 535

Query: 753 LLYLARTHYEAEQWQDCKKSLLRAIHLAPS 782
              L    Y+A+Q+    ++  +A+ L P 
Sbjct: 536 YNSLGSALYKAQQFDPAIEAYKKALSLKPG 565



 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 80/363 (22%), Positives = 145/363 (39%), Gaps = 52/363 (14%)

Query: 120 ASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYS 179
           A R+   +   +   G  L   G  ++A  AF   +  + ++V AL       +   +Y 
Sbjct: 277 AVRLKGDDAVAYNNLGASLYKAGRYQEAIEAFGNAVRLNPNDVEALNNLGAAYYVTAQYD 336

Query: 180 DSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAV 239
            +L+ +++A++V    P A +  +G   Y  G+  +A  A+++A+QL  + VEA   L  
Sbjct: 337 RALQNFQQAVRVKADSPDA-QYNLGNAYYMTGKYREATAAYRQAIQLKADYVEARTNLGS 395

Query: 240 MDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTET-ALAVT 298
           + +   E    ++ + ++  +  +     +A N L       G+       TE    AV 
Sbjct: 396 LLIALGEN---QEAITELNESIRLRRDNPVAHNNLGYANVKLGESLAPAAATEYFRRAVD 452

Query: 299 NHG------PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQ 352
           ++       P    +  NL   Y+  G Y++A        + +    +F    Y LG   
Sbjct: 453 SYQEALRLRPDYIKALNNLGAVYNKLGQYQEA---VDVLRRAVQGNADFAEAQYNLGTAL 509

Query: 353 LKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQA 412
              G F  A+T+ ++ + + PD  E   +LG               L KA + DP     
Sbjct: 510 YNRGQFNEAVTSLQQAVRLKPDYAEAYNSLGSA-------------LYKAQQFDP----- 551

Query: 413 FIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFK 472
                          A++A+K A +L  K G     E  NN+G ++F    +  A  SFK
Sbjct: 552 ---------------AIEAYKKALSL--KPGT---AETNNNLGTVYFRTKRYPEAAGSFK 591

Query: 473 DAL 475
           +A+
Sbjct: 592 EAV 594



 Score = 47.8 bits (112), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 78/311 (25%), Positives = 131/311 (42%), Gaps = 39/311 (12%)

Query: 374 DNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAF 432
           D  E  K  G+ Y  LGQ  +A      A K+ P+DA  + +LG      +    A  AF
Sbjct: 113 DRAEAFKNQGNTYYDLGQFAQAITAYENALKVTPQDAVIYNNLGAAYFGLNKNNEAAQAF 172

Query: 433 KTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDA--LGDGIWLTLLDSKTKT 490
             ++++  KA +    +   N+G+ +    +F+ A ++FKDA  +  G W    ++   T
Sbjct: 173 --SKSIALKADD---ADAYFNLGIAYSSMDKFDDALKAFKDAVRIKPG-WGEAHNAIGDT 226

Query: 491 YVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQI---HDTVAASVL 547
           Y+      M  F+D    ++       V L     T   NL   L+++   +D++ A  L
Sbjct: 227 YL-----GMSNFQDAARAYQ-----QAVRLEPTNSTAYSNLGYALDRLGRSNDSIEA--L 274

Query: 548 YRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKND 607
              +  K  D V AY  L A        Q +IE    A+++N     AL+ LG       
Sbjct: 275 RNAVRLKGDDAV-AYNNLGASLYKAGRYQEAIEAFGNAVRLNPNDVEALNNLGAAYYVTA 333

Query: 608 DWVKAKETF----RAASDATDGKDSYATLSLGNWNYFAALRNE-----KRAPKLEATHLE 658
            + +A + F    R  +D+ D     A  +LGN  Y      E     ++A +L+A ++E
Sbjct: 334 QYDRALQNFQQAVRVKADSPD-----AQYNLGNAYYMTGKYREATAAYRQAIQLKADYVE 388

Query: 659 KAKELYTRVIV 669
               L + +I 
Sbjct: 389 ARTNLGSLLIA 399


>gi|449129153|ref|ZP_21765384.1| hypothetical protein HMPREF9724_00049 [Treponema denticola SP37]
 gi|448945995|gb|EMB26860.1| hypothetical protein HMPREF9724_00049 [Treponema denticola SP37]
          Length = 415

 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 91/346 (26%), Positives = 152/346 (43%), Gaps = 21/346 (6%)

Query: 138 LLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPG 197
           LL    + +A + FK +LE D  N  AL+G    E    +++++++FYK+ L+ HPS   
Sbjct: 70  LLKGNSITEAINVFKKILELDPTNNYALVGLGDAERKNNKFNEAIKFYKQCLEHHPSNNY 129

Query: 198 AIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKM 257
           A+  G+  C   + Q  KA   ++  L+ D +N+  L  +A    +  E     K  +  
Sbjct: 130 AL-FGLADCYKSMNQFPKAIAIWEEYLKFDDKNITVLTRVADAYRKTKE---FEKAEKLY 185

Query: 258 QRAFEIYPYCAMALNYLA--NHFFFTGQHFLV--EQLTETALAVTNHGPTKSHSYYNLAR 313
           Q+  E  P  A AL  L   N+ F   +  LV  E++ E++  + +     S     +  
Sbjct: 186 QKVLEKSPKNAYALIGLGHLNYDFKKYREALVYWEKVMESSGELVDIRILTS-----IGN 240

Query: 314 SYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYP 373
            Y     +++ G+YY     E   P  F +  +GL      L    +++  ++K+LE+ P
Sbjct: 241 CYRKMKLFDR-GVYYFERALE-RSPDNF-YGLFGLADCYRGLNQQYNSIVYWKKILELDP 297

Query: 374 DNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFK 433
           +N   L  +G  Y  +   EKA+E  +KA  ID  D+ A + L    I        D   
Sbjct: 298 NNKVILTRIGDAYRSMNDFEKAKESYQKALDID-FDSYAMLGLA---ILCKLQQKYDQAI 353

Query: 434 TARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGI 479
           T  T LK  G +    V   +   + EK E + A ++  D    GI
Sbjct: 354 TTLTHLKDTG-DTNYRVYLELAQCYIEKKEKQKAIETLIDFQKLGI 398


>gi|118395433|ref|XP_001030066.1| SLEI family protein [Tetrahymena thermophila]
 gi|89284354|gb|EAR82403.1| SLEI family protein [Tetrahymena thermophila SB210]
          Length = 2397

 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 131/647 (20%), Positives = 259/647 (40%), Gaps = 108/647 (16%)

Query: 125 MHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEF 184
           M +  +   K      +  +E+A   +K VLE D  NV AL     +  ++ ++ +SLEF
Sbjct: 1   MEDSQSLCDKALDFQKQNLLEEAIECYKKVLEVDASNVEALYNLGLIHQSKKQHDESLEF 60

Query: 185 YKRALQVHPSCPGAIRLGIGLCR----YKLGQLGKARQAFQRALQLDPENVEALVALAVM 240
             RA++ +P+      L   +C+     +   L +A    Q+AL++DP++ +A   L   
Sbjct: 61  LNRAIEKNPN-----YLNAYICKAENYLQKKMLDEAVACLQKALEIDPKSAKAHERLGFA 115

Query: 241 DLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 300
             + N      K ++  ++A EI P    A + L   F +  ++ +++Q  +    + N 
Sbjct: 116 YKKQN---LTNKAIQCFKKAIEIDPNFTEAHHNLG--FAYESKN-MIDQAYDCYKNILNI 169

Query: 301 GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRS 360
            P   ++Y +LAR+Y++  DY+                                      
Sbjct: 170 DPNYVNTYISLARNYYT--DYK-----------------------------------IED 192

Query: 361 ALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 420
           ++   +K +EI  +  E  + LG++Y    + E+A +  +KA +IDP+   A  +LG L 
Sbjct: 193 SIKYLKKAIEIDQNCVEAYERLGYVYQNTSKKEEAIKHYKKAIEIDPKYFNAQFNLGLLY 252

Query: 421 ISSDT-GAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALG--- 476
                   AL  F+ A  +  K+ +       NNIG++++ K     A + +K AL    
Sbjct: 253 YEEQKDDEALTYFQKAIEINPKSPDSY-----NNIGLVYYHKNMITEALEYYKKALDVDP 307

Query: 477 ---------------DGIWLTLLDSKTKTYVIDAS--ASMLQFKDMQLFHRFENDGNHVE 519
                            +    ++S  K+  ++     S+    D+ +     ++G  +E
Sbjct: 308 QYHKAYHNSALAYEKQNLIQNAIESYKKSIEMNPKFLKSLTNLGDLCIEQNLADEG--IE 365

Query: 520 LPWNKVTVL--------FNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKA 571
             + K+  +        F LA L +       A   Y+ ++    +Y +AYL L  I   
Sbjct: 366 C-FKKIIQIDPYSHYDHFQLAFLYQDKDMNEEAVKTYKKVIELNPEYTNAYLNLGIIYSD 424

Query: 572 RNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYAT 631
           +     +     +A++V+  Y  A     ++     +  +A E ++ A +  + K +Y+ 
Sbjct: 425 QKMFDEAQSCFKKAIQVDPNYYKAYYRSAEVYELQGNTTEAIECYKKAIE-INPKYTYSY 483

Query: 632 LSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQF 691
           +SL        L+N            ++A   Y  V+    +NL A N  G +   K  +
Sbjct: 484 VSLAMLQ--TILKN-----------YDEAIACYQNVLAIEENNLSALNNLGYIYYLKNMY 530

Query: 692 DVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQ 738
           D + D F +  +  +         ++ NL   Y ++     A++ Y+
Sbjct: 531 DEALDYFKKRLQLDTTDYL-----IYYNLGATYESKNMLEEALEYYK 572



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 91/423 (21%), Positives = 182/423 (43%), Gaps = 68/423 (16%)

Query: 31  DILKAEQAPLDLWLIIAREYFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALG 90
           +IL  +   ++ ++ +AR Y+   K+E   + L++    EID+   +  YER        
Sbjct: 165 NILNIDPNYVNTYISLARNYYTDYKIEDSIKYLKKAI--EIDQNCVEA-YER-------- 213

Query: 91  VYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSA 150
                LG +     +KEE    A ++Y KA  ID    +     G L   + + ++A + 
Sbjct: 214 -----LGYVYQNTSKKEE----AIKHYKKAIEIDPKYFNAQFNLGLLYYEEQKDDEALTY 264

Query: 151 FKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 210
           F+  +E +  +  +      V +++   +++LE+YK+AL V P    A      L   K 
Sbjct: 265 FQKAIEINPKSPDSYNNIGLVYYHKNMITEALEYYKKALDVDPQYHKAYH-NSALAYEKQ 323

Query: 211 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 270
             +  A ++++++++++P+ +++L  L  + ++ N A    +G+E  ++  +I PY    
Sbjct: 324 NLIQNAIESYKKSIEMNPKFLKSLTNLGDLCIEQNLA---DEGIECFKKIIQIDPYSHY- 379

Query: 271 LNYLANHF---FFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGL- 326
                +HF   F      + E+  +T   V    P  +++Y NL   Y  +  +++A   
Sbjct: 380 -----DHFQLAFLYQDKDMNEEAVKTYKKVIELNPEYTNAYLNLGIIYSDQKMFDEAQSC 434

Query: 327 ----------YYMASVK----------------------EINKPHEFIFPYYGLGQVQLK 354
                     YY A  +                      EIN   ++ + Y  L  +Q  
Sbjct: 435 FKKAIQVDPNYYKAYYRSAEVYELQGNTTEAIECYKKAIEINP--KYTYSYVSLAMLQTI 492

Query: 355 LGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFI 414
           L ++  A+  ++ VL I  +N   L  LG+IY      ++A +  +K  ++D  D   + 
Sbjct: 493 LKNYDEAIACYQNVLAIEENNLSALNNLGYIYYLKNMYDEALDYFKKRLQLDTTDYLIYY 552

Query: 415 DLG 417
           +LG
Sbjct: 553 NLG 555



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 89/411 (21%), Positives = 159/411 (38%), Gaps = 95/411 (23%)

Query: 96  LGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVL 155
           LG++    ++ EE    A ++Y  A  +D     +++G G +  AKG  E+A   F    
Sbjct: 652 LGQLNQAIKQMEE----AIRFYLAAIELDPKCIKSYLGLGSIYSAKGINEKALECFSKAE 707

Query: 156 EADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGK 215
           E D +N     G   + + +  Y  ++E + +AL+++P+   AI    GL   +  Q  K
Sbjct: 708 EIDANNAAIFNGIGFMYYTQKSYDQAIENFNKALEINPNYELAIYY-TGLVYQQKNQNDK 766

Query: 216 ARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLA 275
           A + +Q+ LQ+ P + +A V +     Q N+         K                  A
Sbjct: 767 ALECYQKVLQIKPNDKKAKVRI----FQINQKNQQEDKTPKT-----------------A 805

Query: 276 NHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEI 335
             F+  G  + ++   E ++           +YY           Y+K GL Y       
Sbjct: 806 KEFYQQGYKYYIQLKDEQSIECLQKALELDPNYYEA---------YDKLGLIYKEK---- 852

Query: 336 NKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYV-------- 387
                             K+  F  A+ N++KVLEI PD  + +K + +IY+        
Sbjct: 853 ------------------KM--FDEAIVNYKKVLEINPDCLDIIKTVMNIYLDRKMLDEA 892

Query: 388 ---------------QLGQIEKAQELL-------RKAAKIDPRDAQAFIDLGELLISS-D 424
                          +   + K+Q +        +K  ++DP D  A I LG L ++  D
Sbjct: 893 KAFYDEVPKNLDTYYEFADVYKSQNMFEESVTNYKKVLELDPNDIDAHILLGSLYLNKPD 952

Query: 425 TGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
              AL+ ++    +  K          NN+G+++F +   + A + F  AL
Sbjct: 953 YEKALECYQNILNIDSKQA-----VAYNNMGLVYFRQNIDDQALEYFNKAL 998



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 78/355 (21%), Positives = 139/355 (39%), Gaps = 65/355 (18%)

Query: 117  YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 176
            Y K   +D ++    +  G L L K + E+A   ++ +L  D     A      V F + 
Sbjct: 926  YKKVLELDPNDIDAHILLGSLYLNKPDYEKALECYQNILNIDSKQAVAYNNMGLVYFRQN 985

Query: 177  RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVA 236
                +LE++ +AL+V+P    +I    GL   K  Q  KA + + + L ++P   + L  
Sbjct: 986  IDDQALEYFNKALEVNPKYELSI-YNSGLVYEKKNQKDKALELYNQVLAINPTEKKTLAR 1044

Query: 237  LAV-------------------------------------------MDL---QANEAAGI 250
            + +                                           +DL   QA E  G+
Sbjct: 1045 MEILKKKEQEQEQKLETAKDYLDQGFKYYNQMKDEESINCYKKALELDLNYFQAYEKLGL 1104

Query: 251  --------RKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGP 302
                     + +E  ++A EI P C  A+  + N        +L +++ + A       P
Sbjct: 1105 LHKTNKKFDEAVENYKKAIEINPKCFSAMKAVMN-------LYLDKKMIKEAQEFCEFVP 1157

Query: 303  TKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSAL 362
              + +YY L R+Y  +   + A + Y  ++ +++  H  I  Y  LG   L    F  AL
Sbjct: 1158 KCTEAYYELGRTYEEQNMLDDAIVNYKKAI-QLDPSH--INSYIYLGNSYLDKLQFDLAL 1214

Query: 363  TNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 417
             +++K++EI P        +G +Y + G  + A E  +KA  +DP    A  + G
Sbjct: 1215 DSYKKIIEIDPKKAVAYNNVGVVYNKQGLYDAALEYYKKALDVDPHYELALFNSG 1269



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 77/361 (21%), Positives = 148/361 (40%), Gaps = 18/361 (4%)

Query: 117  YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 176
            Y +A  +D    + ++  G   L K   +QA   +K +LE D     A      V F++ 
Sbjct: 1714 YQRAIELDSKYINAYIQLGNAYLDKPMFDQALETYKKILEIDPQKPVAYNNIGLVYFDQN 1773

Query: 177  RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVA 236
               ++LE + +AL+++P    ++    GL   +  Q  KA + + + L+++P    +L  
Sbjct: 1774 MNDEALEQFNKALEINPKYELSL-YNSGLVYERKNQTDKALECYNKVLEINPTESRSLAR 1832

Query: 237  LAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALA 296
               +  + N +      ++ +Q  F           Y  +  F        ++  E    
Sbjct: 1833 KRALQKKNNSSNNGFDFLDDLQNKFGSSNKSTAEQQY--SQAFLYYMQMEDDKSIECLKK 1890

Query: 297  VTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLG 356
                 P    +Y  L   Y  +  +++A  +Y   +K   K  E I     + Q +  + 
Sbjct: 1891 AIEIDPNYYAAYERLGFVYSQQKKFDEAIEFYQKGIKVNPKGMECIRSLVKIYQDKFMVN 1950

Query: 357  DFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDL 416
            + +       K LE Y +       L  IY +    E+A +  +KA ++DP    A+I+L
Sbjct: 1951 EAKEFFNQIPKCLETYYE-------LATIYSECKMTEEAIDYFQKAIELDPLYINAYIEL 2003

Query: 417  GEL-LISSDTGAALDAF-KTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDA 474
            G L L  ++   AL+ + K  +   +KA         NNIG++H+++   + A + +  A
Sbjct: 2004 GNLHLGKAEYDQALECYQKIIQINPQKAV------AYNNIGLVHYKQKMDDKAIEYYNKA 2057

Query: 475  L 475
            L
Sbjct: 2058 L 2058



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 97/433 (22%), Positives = 175/433 (40%), Gaps = 86/433 (19%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
           A Q + KA  ID +        G    +K  ++QA   +K +L  D + V   +  A   
Sbjct: 125 AIQCFKKAIEIDPNFTEAHHNLGFAYESKNMIDQAYDCYKNILNIDPNYVNTYISLARNY 184

Query: 173 FNRGRYSDSLEFYKRALQVHPSCPGAI-RLGIGLCRYKLGQLGKARQA---FQRALQLDP 228
           +   +  DS+++ K+A+++  +C  A  RLG     Y      K  +A   +++A+++DP
Sbjct: 185 YTDYKIEDSIKYLKKAIEIDQNCVEAYERLG-----YVYQNTSKKEEAIKHYKKAIEIDP 239

Query: 229 ENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVE 288
           +   A   L ++     E     + +   Q+A EI P    + N +     +  ++ + E
Sbjct: 240 KYFNAQFNLGLL---YYEEQKDDEALTYFQKAIEINPKSPDSYNNIG--LVYYHKNMITE 294

Query: 289 QLT--ETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYY 346
            L   + AL V    P    +Y+N A +Y  +   + A   Y  S+ E+N   +F+    
Sbjct: 295 ALEYYKKALDV---DPQYHKAYHNSALAYEKQNLIQNAIESYKKSI-EMNP--KFLKSLT 348

Query: 347 GLGQ--VQLKLGD-----FRS---------------------------ALTNFEKVLEIY 372
            LG   ++  L D     F+                            A+  ++KV+E+ 
Sbjct: 349 NLGDLCIEQNLADEGIECFKKIIQIDPYSHYDHFQLAFLYQDKDMNEEAVKTYKKVIELN 408

Query: 373 PDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL-ISSDTGAALDA 431
           P+       LG IY      ++AQ   +KA ++DP   +A+    E+  +  +T  A++ 
Sbjct: 409 PEYTNAYLNLGIIYSDQKMFDEAQSCFKKAIQVDPNYYKAYYRSAEVYELQGNTTEAIEC 468

Query: 432 FKTA-----------------RTLLKK------------AGEEVPIEVLNNIGVIHFEKG 462
           +K A                 +T+LK             A EE  +  LNN+G I++ K 
Sbjct: 469 YKKAIEINPKYTYSYVSLAMLQTILKNYDEAIACYQNVLAIEENNLSALNNLGYIYYLKN 528

Query: 463 EFESAHQSFKDAL 475
            ++ A   FK  L
Sbjct: 529 MYDEALDYFKKRL 541



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 82/378 (21%), Positives = 148/378 (39%), Gaps = 78/378 (20%)

Query: 89   LGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQAS 148
            L  YY  L K+   Q   +E  +    YY K   +D    + ++  G   L K   +QA 
Sbjct: 1434 LDAYYK-LAKVYQDQNMLDESIV----YYKKVLELDSKYINAYIQLGNAYLDKPLYDQAM 1488

Query: 149  SAFKIVLEADRDNVPA--LLGQACVEFNRGRYSD----------------------SLEF 184
              ++ ++E D     A  +L +A  +FN+   +D                      +LE 
Sbjct: 1489 ECYQKIIEIDSKEPVAQNMLDEALEQFNKAIEADPEYELSIYNSGLVYEKKHQKDKALEC 1548

Query: 185  YKRALQVHPSCPGAIRLGIGLCRYKLGQLGKAR--------------------------- 217
            Y RAL+++P+    +   +   + K G+  +                             
Sbjct: 1549 YNRALEINPAHKNTLS-RLNKLKKKTGKQAQGTDKEEQQEKNLQTAKDYYEEGYKYYTEL 1607

Query: 218  ------QAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMAL 271
                  +   +A++LDP   EA   L ++ L+AN      + ++  ++A E+ P C  A+
Sbjct: 1608 NDDESIKCLNKAIELDPNYSEAYDKLGLV-LKANRK--YEEAIQSYKKAIEVNPKCFAAM 1664

Query: 272  NYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA-GLYYMA 330
              + N++       L  ++   A    ++ P    ++Y+L R Y  +   ++A G Y  A
Sbjct: 1665 EAVMNYY-------LDRKMINEAKEFYDYVPKCVETHYHLGRVYQDQNMLDEAIGSYQRA 1717

Query: 331  SVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLG 390
                I    ++I  Y  LG   L    F  AL  ++K+LEI P        +G +Y    
Sbjct: 1718 ----IELDSKYINAYIQLGNAYLDKPMFDQALETYKKILEIDPQKPVAYNNIGLVYFDQN 1773

Query: 391  QIEKAQELLRKAAKIDPR 408
              ++A E   KA +I+P+
Sbjct: 1774 MNDEALEQFNKALEINPK 1791



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 76/349 (21%), Positives = 145/349 (41%), Gaps = 42/349 (12%)

Query: 80   YERIAILNAL-GVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLL 138
            Y++I  +N    V Y  +G +  KQ+  ++    A +YYNKA  +D +   ++   G + 
Sbjct: 2020 YQKIIQINPQKAVAYNNIGLVHYKQKMDDK----AIEYYNKALELDPNYDLSYYNSGLVY 2075

Query: 139  LAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDS----------------- 181
              K + ++A   +K VL+ +  +   L     ++ N G   D+                 
Sbjct: 2076 EQKKDFDKALECYKKVLKINPKDKKTLNRINLIKKNNGDKIDNQTKEDEVSEPEDYDDDY 2135

Query: 182  --LEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAV 239
               +  K+ LQ             G   Y   +  +  +  ++A+++DP+  EA   L +
Sbjct: 2136 EDGDEQKKDLQT-----AEDYYNQGFKYYNQMKDQECIKCLKKAIEIDPKYSEAYDKLGL 2190

Query: 240  MDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTN 299
            +     E     + +E  ++A E  P    +++ L   +       + +++TE A    N
Sbjct: 2191 V---YEENEQFEEAIECYKKAIEHKPNSLDSISALMTLY-------INQKMTEEAKEFYN 2240

Query: 300  HGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFR 359
                 +  YY LAR Y  K   ++A     +  K I    +++  Y  LG +      + 
Sbjct: 2241 SVQQSADIYYELARVYEDKSMVDEA---ISSHKKAIELDPKYVNSYIQLGNIYSDKASYE 2297

Query: 360  SALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPR 408
             A   ++K+LEI P+N      +G IY   G+ ++A E   KA +I+P+
Sbjct: 2298 QATEYYQKILEIEPNNEIAYNNIGLIYYDQGKNDQALEQYNKALEINPK 2346



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 83/377 (22%), Positives = 150/377 (39%), Gaps = 50/377 (13%)

Query: 117  YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 176
            Y KA ++D    ++++  G   L K + + A  ++K ++E D     A      V   +G
Sbjct: 1183 YKKAIQLDPSHINSYIYLGNSYLDKLQFDLALDSYKKIIEIDPKKAVAYNNVGVVYNKQG 1242

Query: 177  RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVA 236
             Y  +LE+YK+AL V P    A+    GL   K G+  KA + F + L+++P   ++L  
Sbjct: 1243 LYDAALEYYKKALDVDPHYELAL-FNSGLVYEKKGEQDKALEFFYKTLEINPTEKKSLNR 1301

Query: 237  LAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNY----LANHFFFTGQHFLVEQLTE 292
            + V  +Q N      K   K  + F ++              A+ +++ G  +  +Q  +
Sbjct: 1302 IKV--IQQN------KQTSKDDKEFSLFKDIFKKDKKKVLSTADDYYYEGFDYYQQQNDD 1353

Query: 293  TALAVTNHG----PTKSHSYYNLARSYHSKGDYEKAGLYY-------------MASV--- 332
             A+          P    +Y  L   Y  K  ++++  +Y             M +V   
Sbjct: 1354 KAIECLKKALEIDPNFYEAYDKLGLVYKEKKMFDESITHYKKAFELNPKFYSAMETVMNM 1413

Query: 333  ----KEINKPHEF-------IFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKA 381
                K I +  EF       +  YY L +V         ++  ++KVLE+          
Sbjct: 1414 YLDKKMIKEAKEFSEQVPKNLDAYYKLAKVYQDQNMLDESIVYYKKVLELDSKYINAYIQ 1473

Query: 382  LGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL------ISSDTGAALDAFKTA 435
            LG+ Y+     ++A E  +K  +ID ++  A   L E L      I +D    L  + + 
Sbjct: 1474 LGNAYLDKPLYDQAMECYQKIIEIDSKEPVAQNMLDEALEQFNKAIEADPEYELSIYNSG 1533

Query: 436  RTLLKKAGEEVPIEVLN 452
                KK  ++  +E  N
Sbjct: 1534 LVYEKKHQKDKALECYN 1550



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 92/429 (21%), Positives = 170/429 (39%), Gaps = 82/429 (19%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
           A + Y K+  ++     +    G L + +   ++    FK +++ D  +       A + 
Sbjct: 329 AIESYKKSIEMNPKFLKSLTNLGDLCIEQNLADEGIECFKKIIQIDPYSHYDHFQLAFLY 388

Query: 173 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 232
            ++    ++++ YK+ ++++P    A  L +G+         +A+  F++A+Q+DP   +
Sbjct: 389 QDKDMNEEAVKTYKKVIELNPEYTNAY-LNLGIIYSDQKMFDEAQSCFKKAIQVDPNYYK 447

Query: 233 ALVALA-VMDLQANEAAGIRKGMEKMQRAFEIYP-----YCAMAL--NYLANHFFFTGQH 284
           A    A V +LQ N    I    E  ++A EI P     Y ++A+    L N+      +
Sbjct: 448 AYYRSAEVYELQGNTTEAI----ECYKKAIEINPKYTYSYVSLAMLQTILKNYDEAIACY 503

Query: 285 FLVEQLTETALAVTNH------------------------GPTKSHSYYNLARSYHSKGD 320
             V  + E  L+  N+                          T    YYNL  +Y SK  
Sbjct: 504 QNVLAIEENNLSALNNLGYIYYLKNMYDEALDYFKKRLQLDTTDYLIYYNLGATYESKNM 563

Query: 321 YEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLK 380
            E+A  YY  + +E+N  H   F   G    Q  +     A   + KV      N   L 
Sbjct: 564 LEEALEYYKKT-EEMNPNHITTFIRQGNAYSQKNMQ--SEAFECYNKV------NDSNLS 614

Query: 381 AL--GHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGEL------------------- 419
            L    ++VQ   I++  +   K  +++P+  QAF +LG+L                   
Sbjct: 615 TLFEDELFVQTNMIKECIKCYEKTIQLNPKYTQAFCNLGQLNQAIKQMEEAIRFYLAAIE 674

Query: 420 ----LISSDTGAALDAFKTARTLLKKA------GEEVPIE---VLNNIGVIHFEKGEFES 466
                I S  G  L +  +A+ + +KA       EE+      + N IG +++ +  ++ 
Sbjct: 675 LDPKCIKSYLG--LGSIYSAKGINEKALECFSKAEEIDANNAAIFNGIGFMYYTQKSYDQ 732

Query: 467 AHQSFKDAL 475
           A ++F  AL
Sbjct: 733 AIENFNKAL 741



 Score = 49.3 bits (116), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 70/313 (22%), Positives = 123/313 (39%), Gaps = 54/313 (17%)

Query: 145  EQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIG 204
            E++ + +K  LE D +   A      +     ++ +++E YK+A++++P C  A++  + 
Sbjct: 1079 EESINCYKKALELDLNYFQAYEKLGLLHKTNKKFDEAVENYKKAIEINPKCFSAMKAVMN 1138

Query: 205  LCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIY 264
            L  Y   ++ K  Q F    +  P+  EA   L        E   +   +   ++A ++ 
Sbjct: 1139 L--YLDKKMIKEAQEF---CEFVPKCTEAYYELGRT---YEEQNMLDDAIVNYKKAIQLD 1190

Query: 265  PYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 324
            P    +  YL N +    Q  L     ++   +    P K+ +Y N+   Y+ +G Y+ A
Sbjct: 1191 PSHINSYIYLGNSYLDKLQFDLA---LDSYKKIIEIDPKKAVAYNNVGVVYNKQGLYDAA 1247

Query: 325  GLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKAL-- 382
              YY  ++     PH +    +  G V  K G+   AL  F K LEI P   ++L  +  
Sbjct: 1248 LEYYKKALDV--DPH-YELALFNSGLVYEKKGEQDKALEFFYKTLEINPTEKKSLNRIKV 1304

Query: 383  --------------------------------------GHIYVQLGQIEKAQELLRKAAK 404
                                                  G  Y Q    +KA E L+KA +
Sbjct: 1305 IQQNKQTSKDDKEFSLFKDIFKKDKKKVLSTADDYYYEGFDYYQQQNDDKAIECLKKALE 1364

Query: 405  IDPRDAQAFIDLG 417
            IDP   +A+  LG
Sbjct: 1365 IDPNFYEAYDKLG 1377



 Score = 48.9 bits (115), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 114/529 (21%), Positives = 211/529 (39%), Gaps = 78/529 (14%)

Query: 137  LLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCP 196
            L   + E +++    K  +E D +   A      V   + ++ +++EFY++ ++V+P   
Sbjct: 1874 LYYMQMEDDKSIECLKKAIEIDPNYYAAYERLGFVYSQQKKFDEAIEFYQKGIKVNPKGM 1933

Query: 197  GAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEK 256
              IR  + + + K   + +A++ F +     P+ +E    LA +    +E     + ++ 
Sbjct: 1934 ECIRSLVKIYQDKF-MVNEAKEFFNQI----PKCLETYYELATI---YSECKMTEEAIDY 1985

Query: 257  MQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYH 316
             Q+A E+ P    A   L N      ++   +Q  E    +    P K+ +Y N+   ++
Sbjct: 1986 FQKAIELDPLYINAYIELGNLHLGKAEY---DQALECYQKIIQINPQKAVAYNNIGLVHY 2042

Query: 317  SKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNC 376
             +   +KA  YY  ++ E++  ++    YY  G V  +  DF  AL  ++KVL+I P + 
Sbjct: 2043 KQKMDDKAIEYYNKAL-ELDPNYDL--SYYNSGLVYEQKKDFDKALECYKKVLKINPKDK 2099

Query: 377  ETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALD----AF 432
            +TL  +  I    G     Q    K  ++   +              D   A D     F
Sbjct: 2100 KTLNRINLIKKNNGDKIDNQ---TKEDEVSEPEDYDDDYEDGDEQKKDLQTAEDYYNQGF 2156

Query: 433  KTARTL--------LKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLT 482
            K    +        LKKA E  P   E  + +G+++ E  +FE A + +K A+       
Sbjct: 2157 KYYNQMKDQECIKCLKKAIEIDPKYSEAYDKLGLVYEENEQFEEAIECYKKAIEHKP--N 2214

Query: 483  LLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTV 542
             LDS         SA M  + + ++    +   N V+       + + LAR+ E      
Sbjct: 2215 SLDS--------ISALMTLYINQKMTEEAKEFYNSVQ---QSADIYYELARVYEDKSMVD 2263

Query: 543  AASVLYRLILFKYQDYVDAYLRLAAIAK------------------------ARNNLQL- 577
             A   ++  +     YV++Y++L  I                          A NN+ L 
Sbjct: 2264 EAISSHKKAIELDPKYVNSYIQLGNIYSDKASYEQATEYYQKILEIEPNNEIAYNNIGLI 2323

Query: 578  ---------SIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFR 617
                     ++E  N+AL++N KY  +L   G +  K D + KA E + 
Sbjct: 2324 YYDQGKNDQALEQYNKALEINPKYELSLYNSGLVYEKKDQYEKALEFYN 2372



 Score = 48.5 bits (114), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 125/634 (19%), Positives = 241/634 (38%), Gaps = 94/634 (14%)

Query: 110  FILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQA 169
            F  A + Y K   ID  +P  +   G +   +   ++A   F   LE +     +L    
Sbjct: 1741 FDQALETYKKILEIDPQKPVAYNNIGLVYFDQNMNDEALEQFNKALEINPKYELSLYNSG 1800

Query: 170  CVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGL----------------CRYKLGQL 213
             V   + +   +LE Y + L+++P+   ++     L                 + K G  
Sbjct: 1801 LVYERKNQTDKALECYNKVLEINPTESRSLARKRALQKKNNSSNNGFDFLDDLQNKFGSS 1860

Query: 214  GKA------RQAFQRALQL-DPENVEALVALAVMDLQ---ANEAAGI--------RKGME 255
             K+       QAF   +Q+ D +++E L     +D     A E  G          + +E
Sbjct: 1861 NKSTAEQQYSQAFLYYMQMEDDKSIECLKKAIEIDPNYYAAYERLGFVYSQQKKFDEAIE 1920

Query: 256  KMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSY 315
              Q+  ++ P     +  L   +      F+V +  E      N  P    +YY LA  Y
Sbjct: 1921 FYQKGIKVNPKGMECIRSLVKIY---QDKFMVNEAKE----FFNQIPKCLETYYELATIY 1973

Query: 316  HSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDN 375
                  E+A  Y+  ++ E++    +I  Y  LG + L   ++  AL  ++K+++I P  
Sbjct: 1974 SECKMTEEAIDYFQKAI-ELDPL--YINAYIELGNLHLGKAEYDQALECYQKIIQINPQK 2030

Query: 376  CETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL-ISSDTGAALDAFKT 434
                  +G ++ +    +KA E   KA ++DP    ++ + G +     D   AL+ +K 
Sbjct: 2031 AVAYNNIGLVHYKQKMDDKAIEYYNKALELDPNYDLSYYNSGLVYEQKKDFDKALECYKK 2090

Query: 435  ARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVID 494
               +  K       + LN I +I    G+ +  +Q+ +D +          S+ + Y  D
Sbjct: 2091 VLKINPKDK-----KTLNRINLIKKNNGD-KIDNQTKEDEV----------SEPEDYDDD 2134

Query: 495  ASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFK 554
                  Q KD+Q    + N G                 +   Q+ D      L + I   
Sbjct: 2135 YEDGDEQKKDLQTAEDYYNQG----------------FKYYNQMKDQECIKCLKKAIEID 2178

Query: 555  YQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKE 614
               Y +AY +L  + +     + +IE   +A++      +++S L  L +      +AKE
Sbjct: 2179 -PKYSEAYDKLGLVYEENEQFEEAIECYKKAIEHKPNSLDSISALMTLYINQKMTEEAKE 2237

Query: 615  TFRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHL----------------E 658
             + +   + D     A +         A+ + K+A +L+  ++                E
Sbjct: 2238 FYNSVQQSADIYYELARVYEDKSMVDEAISSHKKAIELDPKYVNSYIQLGNIYSDKASYE 2297

Query: 659  KAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFD 692
            +A E Y +++    +N  A N  G++  ++G+ D
Sbjct: 2298 QATEYYQKILEIEPNNEIAYNNIGLIYYDQGKND 2331



 Score = 48.1 bits (113), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 77/354 (21%), Positives = 145/354 (40%), Gaps = 32/354 (9%)

Query: 50   YFKQG----KVEQFRQILEEGSSPEIDEYYADVRYERIAILN-ALGVYYTYLG------- 97
            YF Q      +EQF + LE     E+  Y + + YER    + AL  Y   L        
Sbjct: 1769 YFDQNMNDEALEQFNKALEINPKYELSLYNSGLVYERKNQTDKALECYNKVLEINPTESR 1828

Query: 98   ------KIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAF 151
                   ++ K       F       NK    +         +  L   + E +++    
Sbjct: 1829 SLARKRALQKKNNSSNNGFDFLDDLQNKFGSSNKSTAEQQYSQAFLYYMQMEDDKSIECL 1888

Query: 152  KIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLG 211
            K  +E D +   A      V   + ++ +++EFY++ ++V+P     IR  + + + K  
Sbjct: 1889 KKAIEIDPNYYAAYERLGFVYSQQKKFDEAIEFYQKGIKVNPKGMECIRSLVKIYQDKF- 1947

Query: 212  QLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMAL 271
             + +A++ F +     P+ +E    LA +    +E     + ++  Q+A E+ P    A 
Sbjct: 1948 MVNEAKEFFNQI----PKCLETYYELATI---YSECKMTEEAIDYFQKAIELDPLYINAY 2000

Query: 272  NYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMAS 331
              L N      ++   +Q  E    +    P K+ +Y N+   ++ +   +KA  YY  +
Sbjct: 2001 IELGNLHLGKAEY---DQALECYQKIIQINPQKAVAYNNIGLVHYKQKMDDKAIEYYNKA 2057

Query: 332  VKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 385
            + E++  ++    YY  G V  +  DF  AL  ++KVL+I P + +TL  +  I
Sbjct: 2058 L-ELDPNYD--LSYYNSGLVYEQKKDFDKALECYKKVLKINPKDKKTLNRINLI 2108



 Score = 47.4 bits (111), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 29/122 (23%), Positives = 61/122 (50%), Gaps = 1/122 (0%)

Query: 119  KASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRY 178
            KA  +D    ++++  G +   K   EQA+  ++ +LE + +N  A      + +++G+ 
Sbjct: 2271 KAIELDPKYVNSYIQLGNIYSDKASYEQATEYYQKILEIEPNNEIAYNNIGLIYYDQGKN 2330

Query: 179  SDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA 238
              +LE Y +AL+++P    ++    GL   K  Q  KA + + + L ++P    +L  + 
Sbjct: 2331 DQALEQYNKALEINPKYELSL-YNSGLVYEKKDQYEKALEFYNKVLSINPTERRSLNRIK 2389

Query: 239  VM 240
            +M
Sbjct: 2390 LM 2391



 Score = 44.7 bits (104), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 108/541 (19%), Positives = 222/541 (41%), Gaps = 97/541 (17%)

Query: 213 LGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALN 272
           L +A + +++ L++D  NVEAL  L ++     +     + +E + RA E  P      N
Sbjct: 20  LEEAIECYKKVLEVDASNVEALYNLGLIHQSKKQH---DESLEFLNRAIEKNP------N 70

Query: 273 YLANHFFFTGQHFLVEQLTETALAVTNHG----PTKSHSYYNLARSYHSKGDYEKAGLYY 328
           YL N +    +++L +++ + A+A         P  + ++  L  +Y  +    KA   +
Sbjct: 71  YL-NAYICKAENYLQKKMLDEAVACLQKALEIDPKSAKAHERLGFAYKKQNLTNKAIQCF 129

Query: 329 MASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQ 388
             ++ EI+ P+ F   ++ LG           A   ++ +L I P+   T  +L   Y  
Sbjct: 130 KKAI-EID-PN-FTEAHHNLGFAYESKNMIDQAYDCYKNILNIDPNYVNTYISLARNYYT 186

Query: 389 LGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPI 448
             +IE + + L+KA +ID    +A+  LG   +  +T    +A K  +  +     E+  
Sbjct: 187 DYKIEDSIKYLKKAIEIDQNCVEAYERLG--YVYQNTSKKEEAIKHYKKAI-----EIDP 239

Query: 449 EVLN---NIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDM 505
           +  N   N+G++++E+ + + A   F+ A+        ++ K+                 
Sbjct: 240 KYFNAQFNLGLLYYEEQKDDEALTYFQKAIE-------INPKSPD--------------- 277

Query: 506 QLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVL--YRLILFKYQDYVDAYL 563
                           +N + +++         H  +    L  Y+  L     Y  AY 
Sbjct: 278 ---------------SYNNIGLVY--------YHKNMITEALEYYKKALDVDPQYHKAYH 314

Query: 564 RLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDAT 623
             A   + +N +Q +IE   +++++N K+  +L+ LGDL ++ +   +  E F+      
Sbjct: 315 NSALAYEKQNLIQNAIESYKKSIEMNPKFLKSLTNLGDLCIEQNLADEGIECFKKIIQI- 373

Query: 624 DGKDSYATLSLGNWNYF--AALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGA 681
              D Y+     ++++F  A L  +K          E+A + Y +VI  +     A    
Sbjct: 374 ---DPYS-----HYDHFQLAFLYQDKDMN-------EEAVKTYKKVIELNPEYTNAYLNL 418

Query: 682 GVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCL 741
           G++ +++  FD ++  F +  +             +   A VY  QGN   A++ Y+  +
Sbjct: 419 GIIYSDQKMFDEAQSCFKKAIQVDPNYY-----KAYYRSAEVYELQGNTTEAIECYKKAI 473

Query: 742 R 742
            
Sbjct: 474 E 474


>gi|145506301|ref|XP_001439116.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124406290|emb|CAK71719.1| unnamed protein product [Paramecium tetraurelia]
          Length = 815

 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 113/535 (21%), Positives = 221/535 (41%), Gaps = 45/535 (8%)

Query: 117 YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 176
           +N A + D +    ++ +G L   +GE E+A   +   ++ +R+   A + +  +    G
Sbjct: 267 FNMAIKFDSNYIDAYINRGVLFKQQGEKEKALKDYNTAIKLNRNYADAYINRGVLFKQLG 326

Query: 177 RYSDSLEFYKRALQVHPS-CPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV 235
               +L+ Y +A++++P    G    G+  C  +LG+  KA Q F+  ++L+P    A  
Sbjct: 327 ETKKALQDYNQAIRLNPQYAIGYYNRGVLFC--ELGEKQKALQDFKNVIRLNPNYATAYQ 384

Query: 236 ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETAL 295
              V+     E   I   ++    A ++ P  A A  Y      F  Q  +   LT+  +
Sbjct: 385 NRGVL---YGEQGEIENALKDFDMAIKLNPNYATA--YQNRGVLFGEQGQIENALTDFDI 439

Query: 296 AVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKL 355
           A+    PT + +Y N    +  KG+ +KA   Y  ++K +N  ++    YY  G +  + 
Sbjct: 440 AIK-LNPTYASAYQNRGNLFDKKGEKDKALQDYNMAIK-LNPNYDI--AYYTRGLIFKQQ 495

Query: 356 GDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFID 415
           G+   AL +F+K +++  +        G +Y + G+IEKA +    A K++P    A+ +
Sbjct: 496 GEKVQALQDFDKAIQLNLNYATAYYNRGVLYGEQGEIEKALQDFNMAIKLNPNYDTAYQN 555

Query: 416 LGELLISSDTGAALDAFKTARTLLK------KAGEEVPIEVLNNIGVIHFEKGEFESAHQ 469
            G  ++    G    AF+     +K       A +    +  +  GV++ ++GE E A Q
Sbjct: 556 RG--VLYKQQGEKEKAFQDYNMAIKLNPNYATAYQNRGKQSSSRKGVLYKQQGEKEKALQ 613

Query: 470 SFKDAL-----------GDGIWLTLLDSKTKTYVIDASASMLQ------FKDMQLFHRFE 512
            +  A+             G+       K K       A  L       + +  + +  +
Sbjct: 614 DYHTAIKLNPNFATAYYNRGVLFGEQGEKEKALQDYNEAIQLNPNYATAYMNRGVIYGEQ 673

Query: 513 NDGNHVELPWNKV--------TVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLR 564
            +       +NK            +N   L ++  +   A   Y +++F   +  DAY+ 
Sbjct: 674 GEIEKALQDYNKAIKQNPKYAAAYYNRGNLFDERGEKEDALKDYNIVIFLNPNDADAYIN 733

Query: 565 LAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAA 619
             A+       + +++  N+A+K+N  Y  A    G L  +N +  KA + +  A
Sbjct: 734 RGALFGEIGEKEKALQDFNQAIKLNPNYATAYYNRGVLIRENGEKEKALQDYNMA 788



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 91/405 (22%), Positives = 180/405 (44%), Gaps = 35/405 (8%)

Query: 80  YERIAILNA-LGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLL 138
           Y +  ILN    + Y   G +  ++ EKE+    A + YN A +++ +    +  +G L 
Sbjct: 29  YNKAIILNPKSAIAYYNRGILFCEKGEKEK----ALKDYNMAIKLNPNYDIAYYNRGVLF 84

Query: 139 LAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGA 198
             +GE ++A   +  V++ + +N  A + +  +    G +  +L+ Y  A++++P+   A
Sbjct: 85  GEQGEKDKAIQDYNTVIKLNENNTNAYINRGILFKQLGEHEKALQDYNMAIKLNPNDADA 144

Query: 199 IRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQ 258
               +G      GQ  KA Q F  A++L+P +  A     V+  Q  E           +
Sbjct: 145 FN-NLGNLLDDQGQKDKALQNFNTAIKLNPNDATAYYNRGVVFKQKGEK----------E 193

Query: 259 RAFEIYPYCAMALNYLANHF-FFTGQHFLVEQLTETALAVTNH------GPTKSHSYYNL 311
           +A E +    MA+ + +N+   +  +  L +Q  E   A+ ++       P  + +YYN 
Sbjct: 194 KALEDFN---MAIKFDSNYIDAYINRGVLFKQQGEKEKALHDYNLAIKLNPNYATAYYNR 250

Query: 312 ARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEI 371
              +  KG+ +KA   +  ++K       +I  Y   G +  + G+   AL ++   +++
Sbjct: 251 GVVFKQKGEKQKALEDFNMAIKF---DSNYIDAYINRGVLFKQQGEKEKALKDYNTAIKL 307

Query: 372 YPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALD 430
             +  +     G ++ QLG+ +KA +   +A +++P+ A  + + G L     +   AL 
Sbjct: 308 NRNYADAYINRGVLFKQLGETKKALQDYNQAIRLNPQYAIGYYNRGVLFCELGEKQKALQ 367

Query: 431 AFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
            FK    L              N GV++ E+GE E+A + F  A+
Sbjct: 368 DFKNVIRLNPNYA-----TAYQNRGVLYGEQGEIENALKDFDMAI 407



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 79/303 (26%), Positives = 138/303 (45%), Gaps = 20/303 (6%)

Query: 302 PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSA 361
           P  + +YYN    +  KG+ EKA   Y  ++K +N  ++    YY  G +  + G+   A
Sbjct: 37  PKSAIAYYNRGILFCEKGEKEKALKDYNMAIK-LNPNYDI--AYYNRGVLFGEQGEKDKA 93

Query: 362 LTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLI 421
           + ++  V+++  +N       G ++ QLG+ EKA +    A K++P DA AF +LG LL 
Sbjct: 94  IQDYNTVIKLNENNTNAYINRGILFKQLGEHEKALQDYNMAIKLNPNDADAFNNLGNLL- 152

Query: 422 SSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWL 481
             D G    A +   T +K    +       N GV+  +KGE E A + F  A+      
Sbjct: 153 -DDQGQKDKALQNFNTAIKLNPNDAT--AYYNRGVVFKQKGEKEKALEDFNMAI------ 203

Query: 482 TLLDSKTKTYVIDASASM-LQFKDMQLFHRFENDGN-HVELPWNKVTVLFNLARLLEQIH 539
                K  +  IDA  +  + FK      +  +D N  ++L  N  T  +N   + +Q  
Sbjct: 204 -----KFDSNYIDAYINRGVLFKQQGEKEKALHDYNLAIKLNPNYATAYYNRGVVFKQKG 258

Query: 540 DTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSML 599
           +   A   + + +    +Y+DAY+    + K +   + +++  N A+K+N  Y +A    
Sbjct: 259 EKQKALEDFNMAIKFDSNYIDAYINRGVLFKQQGEKEKALKDYNTAIKLNRNYADAYINR 318

Query: 600 GDL 602
           G L
Sbjct: 319 GVL 321



 Score = 65.5 bits (158), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 105/506 (20%), Positives = 200/506 (39%), Gaps = 63/506 (12%)

Query: 96  LGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVL 155
           LG +   Q +K++    A Q +N A +++ ++ + +  +G +   KGE E+A   F + +
Sbjct: 148 LGNLLDDQGQKDK----ALQNFNTAIKLNPNDATAYYNRGVVFKQKGEKEKALEDFNMAI 203

Query: 156 EADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGK 215
           + D + + A + +  +   +G    +L  Y  A++++P+   A     G+   + G+  K
Sbjct: 204 KFDSNYIDAYINRGVLFKQQGEKEKALHDYNLAIKLNPNYATAY-YNRGVVFKQKGEKQK 262

Query: 216 ARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLA 275
           A + F  A++ D   ++A +   V+  Q  E     K ++    A ++    A A     
Sbjct: 263 ALEDFNMAIKFDSNYIDAYINRGVLFKQQGEK---EKALKDYNTAIKLNRNYADA----- 314

Query: 276 NHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEI 335
               +  +  L +QL ET  A+                      DY +A          I
Sbjct: 315 ----YINRGVLFKQLGETKKALQ---------------------DYNQA----------I 339

Query: 336 NKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKA 395
               ++   YY  G +  +LG+ + AL +F+ V+ + P+     +  G +Y + G+IE A
Sbjct: 340 RLNPQYAIGYYNRGVLFCELGEKQKALQDFKNVIRLNPNYATAYQNRGVLYGEQGEIENA 399

Query: 396 QELLRKAAKIDPRDAQAFIDLGELLI-SSDTGAALDAFKTARTLLKKAGEEVPIEVLNNI 454
            +    A K++P  A A+ + G L         AL  F  A  L              N 
Sbjct: 400 LKDFDMAIKLNPNYATAYQNRGVLFGEQGQIENALTDFDIAIKL-----NPTYASAYQNR 454

Query: 455 GVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFEND 514
           G +  +KGE + A Q +       + + L  +    Y         Q + +Q    F+  
Sbjct: 455 GNLFDKKGEKDKALQDYN------MAIKLNPNYDIAYYTRGLIFKQQGEKVQALQDFD-- 506

Query: 515 GNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNN 574
              ++L  N  T  +N   L  +  +   A   + + +    +Y  AY     + K +  
Sbjct: 507 -KAIQLNLNYATAYYNRGVLYGEQGEIEKALQDFNMAIKLNPNYDTAYQNRGVLYKQQGE 565

Query: 575 LQLSIELVNEALKVNGKYPNALSMLG 600
            + + +  N A+K+N  Y  A    G
Sbjct: 566 KEKAFQDYNMAIKLNPNYATAYQNRG 591


>gi|224532341|ref|ZP_03672973.1| TPR domain protein [Borrelia valaisiana VS116]
 gi|224511806|gb|EEF82212.1| TPR domain protein [Borrelia valaisiana VS116]
          Length = 379

 Score = 76.3 bits (186), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 73/318 (22%), Positives = 135/318 (42%), Gaps = 14/318 (4%)

Query: 123 IDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSL 182
           +D+ E S    +G  L+ +  + +A S F  +LE D +N  AL+G   +E  +  Y  ++
Sbjct: 22  LDVTEKSK---RGYQLIKEERLSEAESLFSDILEKDNENNYALVGLGDIERKKNNYDKAI 78

Query: 183 EFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDL 242
            +Y++ L  HP+   A+  G+G C   L    KA   ++  L+ DPEN+  L  +A    
Sbjct: 79  VYYQKCLVKHPNNNYAL-FGLGDCYRNLDDYKKATDIWEEYLKYDPENITVLTRVAS--- 134

Query: 243 QANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGP 302
              +    +K  +   +  E+ P    AL  +  H ++  + +         +   N   
Sbjct: 135 SYRKLKNFQKSKQTYLKVMELMPENDYALVGIG-HLYYDFKEYKEALKYWLKMYELNQSK 193

Query: 303 TKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSAL 362
                  ++   Y    ++ + G+Y+     EI+ P  F +  +GL        +++ AL
Sbjct: 194 VDVRVLTSIGNCYRKLKEFTR-GIYFFKKALEIS-PSNF-YAIFGLADCYRGNKEYKEAL 250

Query: 363 TNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS 422
             +  ++E  P N   L  +G  Y  L   E +Q   +KA  +   D   F  LG  L+ 
Sbjct: 251 KYWFDIIEKDPKNNLVLTRIGDAYRYLNDYENSQIYYKKALDV---DFDMFAILGLALLQ 307

Query: 423 SDTGAALDAFKTARTLLK 440
            + G   +A    ++L+K
Sbjct: 308 KEQGRYEEALIAIKSLIK 325



 Score = 40.0 bits (92), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 43/173 (24%), Positives = 71/173 (41%), Gaps = 32/173 (18%)

Query: 335 INKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK 394
           + K +E  +   GLG ++ K  ++  A+  ++K L  +P+N   L  LG  Y  L   +K
Sbjct: 51  LEKDNENNYALVGLGDIERKKNNYDKAIVYYQKCLVKHPNNNYALFGLGDCYRNLDDYKK 110

Query: 395 AQELLRKAAKIDP--------------------RDAQAFIDLGELLISSD-----TGAAL 429
           A ++  +  K DP                    +  Q ++ + EL+  +D      G   
Sbjct: 111 ATDIWEEYLKYDPENITVLTRVASSYRKLKNFQKSKQTYLKVMELMPENDYALVGIGHLY 170

Query: 430 DAFKTARTLLK---KAGE----EVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
             FK  +  LK   K  E    +V + VL +IG  + +  EF      FK AL
Sbjct: 171 YDFKEYKEALKYWLKMYELNQSKVDVRVLTSIGNCYRKLKEFTRGIYFFKKAL 223


>gi|239946448|ref|ZP_04698204.1| tetratricopeptide TPR_2 [Rickettsia endosymbiont of Ixodes
           scapularis]
 gi|239920724|gb|EER20751.1| tetratricopeptide TPR_2 [Rickettsia endosymbiont of Ixodes
           scapularis]
          Length = 375

 Score = 76.3 bits (186), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 71/315 (22%), Positives = 135/315 (42%), Gaps = 46/315 (14%)

Query: 117 YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 176
           Y+KA  +  ++  ++  KG      G+ E+A   +   ++   D V +   +    +N G
Sbjct: 104 YDKAIELKPNDACSYYNKGNSFYKLGKYEEAIKEYNKAIKLKPDYVESYYNKGISLYNIG 163

Query: 177 RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVA 236
            Y +S+  Y++A+++ P     I    G   + LGQ  +A +A+ +A++L+P +   +  
Sbjct: 164 EYEESIIAYEKAIELKPD-DADIYNNKGTSLFNLGQYEEAIKAYNKAIELNPNDAVVI-- 220

Query: 237 LAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALA 296
                   N        +EK + A + Y   A+ LN                        
Sbjct: 221 --------NNKGTSLSDLEKYEEAIKCYN-QAIELN------------------------ 247

Query: 297 VTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLG 356
                P  + SYYN   S++  G YE+A   Y  ++K   KP +++  YY  G     +G
Sbjct: 248 -----PNDACSYYNKGNSFYKLGKYEEAIKEYNKAIKL--KP-DYVESYYNKGISLYNIG 299

Query: 357 DFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDL 416
           ++  ++  +EK +E+ PD+ +     G     LG+ E+A +   K+ ++ P  A A  + 
Sbjct: 300 EYEESIIAYEKAIELKPDDADIYNNKGTSLFNLGEYEEAIKAYNKSIELKPDFAVAINN- 358

Query: 417 GELLISSDTGAALDA 431
              ++    G+A DA
Sbjct: 359 -RTIVIEKLGSAGDA 372



 Score = 69.3 bits (168), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 86/377 (22%), Positives = 153/377 (40%), Gaps = 76/377 (20%)

Query: 175 RGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEAL 234
           RGRY ++++ Y +A+++ P     +    G     LG+  +A + + +++ L+PE     
Sbjct: 26  RGRYEEAIKEYNKAIKLKPD-EDVLYYKKGNSLAFLGRYEEAIECYDKSISLNPE----- 79

Query: 235 VALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETA 294
                                            A A N   N FF   ++   E L E  
Sbjct: 80  --------------------------------YADAYNNKGNSFFDLEKY--EEALVEYD 105

Query: 295 LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLK 354
            A+    P  + SYYN   S++  G YE+A   Y  ++K   KP +++  YY  G     
Sbjct: 106 KAIE-LKPNDACSYYNKGNSFYKLGKYEEAIKEYNKAIKL--KP-DYVESYYNKGISLYN 161

Query: 355 LGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFI 414
           +G++  ++  +EK +E+ PD+ +     G     LGQ E+A +   KA +++P DA    
Sbjct: 162 IGEYEESIIAYEKAIELKPDDADIYNNKGTSLFNLGQYEEAIKAYNKAIELNPNDAVVIN 221

Query: 415 DLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLN--NIGVIHFEKGEFESAHQSFK 472
           + G  L      + L+ ++ A     +A E  P +  +  N G   ++ G++E A + + 
Sbjct: 222 NKGTSL------SDLEKYEEAIKCYNQAIELNPNDACSYYNKGNSFYKLGKYEEAIKEYN 275

Query: 473 DAL-----------GDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELP 521
            A+             GI L  +    ++ +    A  L+  D  +++            
Sbjct: 276 KAIKLKPDYVESYYNKGISLYNIGEYEESIIAYEKAIELKPDDADIYN------------ 323

Query: 522 WNKVTVLFNLARLLEQI 538
            NK T LFNL    E I
Sbjct: 324 -NKGTSLFNLGEYEEAI 339



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 80/373 (21%), Positives = 151/373 (40%), Gaps = 68/373 (18%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
           A + YNKA ++   E   +  KG  L   G  E+A   +   +  + +   A   +    
Sbjct: 32  AIKEYNKAIKLKPDEDVLYYKKGNSLAFLGRYEEAIECYDKSISLNPEYADAYNNKGNSF 91

Query: 173 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 232
           F+  +Y ++L  Y +A+++ P+         G   YKLG+  +A + + +A++L P+ VE
Sbjct: 92  FDLEKYEEALVEYDKAIELKPN-DACSYYNKGNSFYKLGKYEEAIKEYNKAIKLKPDYVE 150

Query: 233 ALV--ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQH------ 284
           +     +++ ++   E + I       ++A E+ P  A   N      F  GQ+      
Sbjct: 151 SYYNKGISLYNIGEYEESIIA-----YEKAIELKPDDADIYNNKGTSLFNLGQYEEAIKA 205

Query: 285 --FLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFI 342
               +E     A+ + N G + S    +L +       YE+A   Y  ++ E+N P++  
Sbjct: 206 YNKAIELNPNDAVVINNKGTSLS----DLEK-------YEEAIKCYNQAI-ELN-PNDAC 252

Query: 343 FPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKA 402
             YY  G    KLG +  A+  + K +++ PD  E+    G     +G+ E++     KA
Sbjct: 253 -SYYNKGNSFYKLGKYEEAIKEYNKAIKLKPDYVESYYNKGISLYNIGEYEESIIAYEKA 311

Query: 403 AKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKG 462
            ++ P DA                                      ++ NN G   F  G
Sbjct: 312 IELKPDDA--------------------------------------DIYNNKGTSLFNLG 333

Query: 463 EFESAHQSFKDAL 475
           E+E A +++  ++
Sbjct: 334 EYEEAIKAYNKSI 346



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 57/262 (21%), Positives = 111/262 (42%), Gaps = 44/262 (16%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
           A + YNKA ++      ++  KG  L   GE E++  A++  +E   D+      +    
Sbjct: 134 AIKEYNKAIKLKPDYVESYYNKGISLYNIGEYEESIIAYEKAIELKPDDADIYNNKGTSL 193

Query: 173 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 232
           FN G+Y ++++ Y +A++++P+    I    G     L +  +A + + +A++L+P +  
Sbjct: 194 FNLGQYEEAIKAYNKAIELNPNDAVVIN-NKGTSLSDLEKYEEAIKCYNQAIELNPNDA- 251

Query: 233 ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTE 292
                          +   KG                      N F+  G++   E + E
Sbjct: 252 --------------CSYYNKG----------------------NSFYKLGKY--EEAIKE 273

Query: 293 TALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQ 352
              A+    P    SYYN   S ++ G+YE++ + Y  +++   KP +    Y   G   
Sbjct: 274 YNKAIK-LKPDYVESYYNKGISLYNIGEYEESIIAYEKAIEL--KPDDADI-YNNKGTSL 329

Query: 353 LKLGDFRSALTNFEKVLEIYPD 374
             LG++  A+  + K +E+ PD
Sbjct: 330 FNLGEYEEAIKAYNKSIELKPD 351



 Score = 47.8 bits (112), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 27/122 (22%), Positives = 61/122 (50%), Gaps = 1/122 (0%)

Query: 108 EHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLG 167
           E +  A + YN+A  ++ ++  ++  KG      G+ E+A   +   ++   D V +   
Sbjct: 231 EKYEEAIKCYNQAIELNPNDACSYYNKGNSFYKLGKYEEAIKEYNKAIKLKPDYVESYYN 290

Query: 168 QACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLD 227
           +    +N G Y +S+  Y++A+++ P     I    G   + LG+  +A +A+ ++++L 
Sbjct: 291 KGISLYNIGEYEESIIAYEKAIELKPD-DADIYNNKGTSLFNLGEYEEAIKAYNKSIELK 349

Query: 228 PE 229
           P+
Sbjct: 350 PD 351


>gi|445497194|ref|ZP_21464049.1| tetratricopeptide TPR_4 [Janthinobacterium sp. HH01]
 gi|444787189|gb|ELX08737.1| tetratricopeptide TPR_4 [Janthinobacterium sp. HH01]
          Length = 886

 Score = 76.3 bits (186), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 125/519 (24%), Positives = 213/519 (41%), Gaps = 57/519 (10%)

Query: 122 RIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDS 181
           + D  +P   V +G  L+    V++  + F  VL        ALLGQA +         +
Sbjct: 112 KADPRQPQLQVLRGHALIGLDRVDEGRAVFAQVLAGHPGQPGALLGQARLALEAHNRETA 171

Query: 182 LEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMD 241
           L    +ALQ  P    A+RL   L R  LGQ   A  A+Q  L+L PE V+  + +A + 
Sbjct: 172 LRLINQALQGTPDDVDALRLQGDLLR-TLGQTAGALTAYQHVLKLGPELVQPHIDIASLY 230

Query: 242 LQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETAL-AVTNH 300
           +Q  +   + +   ++  A +I P   MA    A   F  G+    ++  +  L A  +H
Sbjct: 231 IQTGK---LNEARAELAVARKISPNSLMAAYTQALLDFREGKLAAAQERLQLVLRAAPDH 287

Query: 301 GPT----------------------------KSHSYYN--LARSYHSKGDYEKAGLYYMA 330
            P+                              H+Y +  LA    + G+ E+A    +A
Sbjct: 288 LPSNLLMGTVLRGLANYSQAEQHLRKFLEAHPGHAYASKQLAAMLMATGNPEQA----LA 343

Query: 331 SVKEINKPHEFIFPYYGL-GQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQL 389
            V+ +   ++       L G++ ++L  +  + + FEK   + P       A+   ++ +
Sbjct: 344 IVEPLFDNNQQDLEMMSLAGEIHMRLRQYPRSASYFEKASALAPQTSMLHAAIAVSHIGM 403

Query: 390 GQIEKAQELLRKAAKIDPRDAQAFIDLGEL-LISSDTGAALDAFKTARTLLKKAGEEVPI 448
           G   +A   L  A  +D + ++A + L    L + D   AL A K     L+    + P+
Sbjct: 404 GDTARAVAELELATSLDGKSSRAGVLLALTHLRNKDYAKALAAVKQ----LESQNGDNPM 459

Query: 449 EVLNNIGVIHFEKGEFESAHQSFKDALG-DGIWLTLLDSKTKTYVIDASASMLQFKDMQL 507
            V N  G +     E   A  +F+ AL  D ++L  LD+ T+  V+D      + +   L
Sbjct: 460 -VQNLKGGVLLMNRERAGARAAFERALALDPVYLPALDNLTQMDVVDKRPEPARLR---L 515

Query: 508 FHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAA 567
                 DG + ++    +T L NLA  + Q H   A   L R +  ++ D  D  L LA 
Sbjct: 516 EAALAKDGKNADI----MTALANLA--ISQGHVAQAGGWLERAV-REHPDVADLNLMLAQ 568

Query: 568 IAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKN 606
                  L  ++ L+ + L  N     ALS + +L+L+N
Sbjct: 569 FYVRNKELPKALVLMQKLLATNPANAEALSFMAELQLRN 607


>gi|113476143|ref|YP_722204.1| hypothetical protein Tery_2526 [Trichodesmium erythraeum IMS101]
 gi|110167191|gb|ABG51731.1| Tetratricopeptide TPR_2 [Trichodesmium erythraeum IMS101]
          Length = 1154

 Score = 76.3 bits (186), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 90/343 (26%), Positives = 146/343 (42%), Gaps = 12/343 (3%)

Query: 126 HEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFY 185
           H PS +V  G     +  +E A  A++  LE D +          V    G+Y  +L  Y
Sbjct: 378 HSPS-YVILGNAFYQQNNLEAALHAYRQGLEIDPELAEVQGNIGSVYLQLGQYKQALFHY 436

Query: 186 KRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQAN 245
           ++A+ + P   G I   IG     LG++ +A  A+ +AL++ P+ VEA     + +    
Sbjct: 437 QKAIDLKPGLAG-IYWNIGKLFQCLGKVDEAINAWSKALEIQPDIVEADFHFKLGNTLV- 494

Query: 246 EAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKS 305
           + + I   ++  +RA  +      A + LAN     G           AL +    P   
Sbjct: 495 KLSRINDAIKSYERAINLKQDYTEAYSNLANILGEKGDREAAVNYYNQALKIN---PELK 551

Query: 306 HSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNF 365
             +  LA +   KGDY++A ++Y  ++K   K ++    Y  LG      G    AL  +
Sbjct: 552 FLHEKLANNLLLKGDYDQAIIHYQEAIKYNPKSYD---AYANLGTALSNKGLLALALEKY 608

Query: 366 EKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDT 425
            K LE+ P   E    +GHI ++  ++E+A  L  KA ++ P+  +A   L +LL  S T
Sbjct: 609 YKALELKPSWAEVYSRIGHI-IKQEKMEEAIALFEKAIELKPQFVEAHQQLCDLL--SHT 665

Query: 426 GAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAH 468
                A K A       GE  PI         +F+ G  E A+
Sbjct: 666 TKLAVARKAADNFCNSCGEIAPILSGTAFLFSYFQSGVSEVAN 708



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 70/232 (30%), Positives = 104/232 (44%), Gaps = 25/232 (10%)

Query: 211 GQLGKARQAFQRALQLDPENVEALVALA-VMDLQANEAAGIRKGMEKMQRAFEIYPYCAM 269
           GQL  A  A+Q+AL + P+ VEA   LA V  +Q N  AGI    E    A +I P+ A 
Sbjct: 19  GQLYTAMIAYQKALAIKPDYVEAYKKLAEVYLMQGNFDAGISACKE----AVKIQPHFAS 74

Query: 270 ALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYM 329
           A   L N   F  Q+ L+E+   T     +  P  +  Y N+   Y+  G++  A   Y 
Sbjct: 75  AYLTLGN--IFQSQN-LLEKAINTYYEALSIEPNFAQVYANIGSVYYKLGEFNLAISNYQ 131

Query: 330 ASVKEINKPHEFIFPYYGLGQVQLKLGD-------FRSALTNFEKVLEIYPDNCETLKAL 382
            ++ EIN           L  VQL LG+       F  A+  ++K+L+I P + +    L
Sbjct: 132 KAL-EINS---------NLASVQLMLGNVFSLIGEFEQAIYCYQKLLQIKPKDAQAYFKL 181

Query: 383 GHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKT 434
             ++     IE A    +K+  I P   +AF+ L +L+    T   LD   T
Sbjct: 182 AEVFALYSNIELAINYYQKSLSIKPNYWEAFLKLSQLIKPEITDQELDKLFT 233



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 60/121 (49%), Gaps = 6/121 (4%)

Query: 356 GDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFID 415
           G   +A+  ++K L I PD  E  K L  +Y+  G  +      ++A KI P  A A++ 
Sbjct: 19  GQLYTAMIAYQKALAIKPDYVEAYKKLAEVYLMQGNFDAGISACKEAVKIQPHFASAYLT 78

Query: 416 LGELLISSD-TGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDA 474
           LG +  S +    A++ +  A ++     E    +V  NIG ++++ GEF  A  +++ A
Sbjct: 79  LGNIFQSQNLLEKAINTYYEALSI-----EPNFAQVYANIGSVYYKLGEFNLAISNYQKA 133

Query: 475 L 475
           L
Sbjct: 134 L 134



 Score = 44.3 bits (103), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 84/177 (47%), Gaps = 11/177 (6%)

Query: 302 PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSA 361
           P  S SY  L  +++ + + E A   Y   + EI+   E       +G V L+LG ++ A
Sbjct: 376 PDHSPSYVILGNAFYQQNNLEAALHAYRQGL-EIDP--ELAEVQGNIGSVYLQLGQYKQA 432

Query: 362 LTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQA--FIDLGEL 419
           L +++K +++ P        +G ++  LG++++A     KA +I P   +A     LG  
Sbjct: 433 LFHYQKAIDLKPGLAGIYWNIGKLFQCLGKVDEAINAWSKALEIQPDIVEADFHFKLGNT 492

Query: 420 LIS-SDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
           L+  S    A+ +++ A  L     ++   E  +N+  I  EKG+ E+A   +  AL
Sbjct: 493 LVKLSRINDAIKSYERAINL-----KQDYTEAYSNLANILGEKGDREAAVNYYNQAL 544



 Score = 42.7 bits (99), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 61/266 (22%), Positives = 108/266 (40%), Gaps = 56/266 (21%)

Query: 345 YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAK 404
           Y     + LK G+  SA+ + ++ L+I PD+  +   LG+ + Q   +E A    R+  +
Sbjct: 348 YINQANLALKQGNLASAIASCKQALKIQPDHSPSYVILGNAFYQQNNLEAALHAYRQGLE 407

Query: 405 IDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKG 462
           IDP  A+   ++G + +       L  +K A    +KA +  P    +  NIG +    G
Sbjct: 408 IDPELAEVQGNIGSVYLQ------LGQYKQALFHYQKAIDLKPGLAGIYWNIGKLFQCLG 461

Query: 463 EFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPW 522
           + + A  ++  AL           + +  +++A      FK                   
Sbjct: 462 KVDEAINAWSKAL-----------EIQPDIVEAD---FHFK------------------- 488

Query: 523 NKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELV 582
                L N    L +I+D + +   Y   +   QDY +AY  LA I   + + + ++   
Sbjct: 489 -----LGNTLVKLSRINDAIKS---YERAINLKQDYTEAYSNLANILGEKGDREAAVNYY 540

Query: 583 NEALKVNG-------KYPNALSMLGD 601
           N+ALK+N        K  N L + GD
Sbjct: 541 NQALKINPELKFLHEKLANNLLLKGD 566


>gi|118360928|ref|XP_001013695.1| TPR Domain containing protein [Tetrahymena thermophila]
 gi|89295462|gb|EAR93450.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
          Length = 507

 Score = 76.3 bits (186), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 71/300 (23%), Positives = 141/300 (47%), Gaps = 23/300 (7%)

Query: 171 VEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPEN 230
           V+   G++  + + +  AL+++P    A   G+G+   +   + ++ Q FQ++L+L+P++
Sbjct: 18  VQIGMGQFEKAKKSFYSALEINPQSAYA-YCGLGIIYSEQNMIKESEQYFQKSLELNPKS 76

Query: 231 VEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQL 290
              L  L ++    ++   I + +   Q+A E       + N L   +     H   +QL
Sbjct: 77  AVTLCNLGIL---FDKCGTIDQRIFYYQQAIESDRSIDQSYNGLGLAYLDKQMHENAKQL 133

Query: 291 TETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFP-YYGLG 349
            +  L V    P   ++Y NLA  +  + +Y+++ +  +    +I++  +  F  YY L 
Sbjct: 134 FQKCLEVN---PQNFNAYLNLATIFRIESNYQES-IVCLERCLKIDRQSDKTFSIYYYLA 189

Query: 350 QVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRD 409
               +LG    A+   +K +EI P        +G+IY ++G +E++Q+ L  + KI+P  
Sbjct: 190 DAYQQLGMMEDAIEYLKKTIEIEPQQYFLHDKIGYIYEKMGNLEESQKHLETSLKINPES 249

Query: 410 AQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESA 467
           A    +L  LL              AR L +K  +  P  + +L N+G  +++ G+FE A
Sbjct: 250 AGTLANLAHLL------------DKARDLYEKLLKLEPNSVTILLNLGGCYYKLGQFEQA 297



 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 84/373 (22%), Positives = 156/373 (41%), Gaps = 47/373 (12%)

Query: 135 GQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS 194
           G + +  G+ E+A  +F   LE +  +  A  G   +   +    +S ++++++L+++P 
Sbjct: 16  GNVQIGMGQFEKAKKSFYSALEINPQSAYAYCGLGIIYSEQNMIKESEQYFQKSLELNPK 75

Query: 195 CPGAIRL-GIGLCRYKLGQLGKARQAFQRALQLDPENVEAL--VALAVMDLQANEAAGIR 251
              A+ L  +G+   K G + +    +Q+A++ D    ++   + LA +D Q +E A   
Sbjct: 76  --SAVTLCNLGILFDKCGTIDQRIFYYQQAIESDRSIDQSYNGLGLAYLDKQMHENAK-- 131

Query: 252 KGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNL 311
              +  Q+  E+ P    A   LA  F     +       E  L +          YY L
Sbjct: 132 ---QLFQKCLEVNPQNFNAYLNLATIFRIESNYQESIVCLERCLKIDRQSDKTFSIYYYL 188

Query: 312 ARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEI 371
           A +Y   G  E A + Y+    EI +P ++ F +  +G +  K+G+   +  + E  L+I
Sbjct: 189 ADAYQQLGMMEDA-IEYLKKTIEI-EPQQY-FLHDKIGYIYEKMGNLEESQKHLETSLKI 245

Query: 372 YPDNCETLKALGHI----------------------------YVQLGQIEKAQELLRKAA 403
            P++  TL  L H+                            Y +LGQ E+A +  +   
Sbjct: 246 NPESAGTLANLAHLLDKARDLYEKLLKLEPNSVTILLNLGGCYYKLGQFEQAIKYNQNIL 305

Query: 404 KIDPRDAQAFIDLGELLISSD-TGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKG 462
            IDP++  A  + G +      T  A+  F+ +     K G+ +      N+G+IH + G
Sbjct: 306 SIDPKNYLANFNQGIIYYQKGMTENAIKYFQKSFQSKSKYGDAIY-----NLGIIHGQNG 360

Query: 463 EFESAHQSFKDAL 475
             + A    K AL
Sbjct: 361 NLQEAEYFNKLAL 373



 Score = 49.3 bits (116), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 65/139 (46%), Gaps = 20/139 (14%)

Query: 345 YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAK 404
           Y  LG VQ+ +G F  A  +F   LEI P +      LG IY +   I+++++  +K+ +
Sbjct: 12  YEDLGNVQIGMGQFEKAKKSFYSALEINPQSAYAYCGLGIIYSEQNMIKESEQYFQKSLE 71

Query: 405 IDPRDAQAFIDLGELLISSDTGAALD--------AFKTARTLLKKAGEEVPIEVLNNIGV 456
           ++P+ A    +LG L    D    +D        A ++ R++          +  N +G+
Sbjct: 72  LNPKSAVTLCNLGILF---DKCGTIDQRIFYYQQAIESDRSI---------DQSYNGLGL 119

Query: 457 IHFEKGEFESAHQSFKDAL 475
            + +K   E+A Q F+  L
Sbjct: 120 AYLDKQMHENAKQLFQKCL 138


>gi|73671072|ref|YP_307087.1| TPR domain-containing protein [Methanosarcina barkeri str. Fusaro]
 gi|72398234|gb|AAZ72507.1| TPR-domain containing protein [Methanosarcina barkeri str. Fusaro]
          Length = 1979

 Score = 76.3 bits (186), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 102/387 (26%), Positives = 164/387 (42%), Gaps = 33/387 (8%)

Query: 113  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
            A + +  A  +D    + W   G  LL     E+AS AF   L    DNV AL  ++   
Sbjct: 1598 AVEAFENAVELDPALEAAWEQIGLSLLRLNMYEEASQAFSSALTLKPDNVNALYSRSEAS 1657

Query: 173  FNRGRYSDSLEFYKRALQVHP----SCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDP 228
            F    + ++ +  ++ L   P    S     RLGI   R +L +  KA +AF   LQ DP
Sbjct: 1658 FQLQHFEEAAQDLEKVLLSAPDFLNSIEACYRLGIA--RMELQECEKALEAFDIVLQQDP 1715

Query: 229  ENVEALV--ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFL 286
             + EAL    L + +L   EAA    GM       E  P    +LNYL       G   L
Sbjct: 1716 AHREALYYRGLVLFNLSEYEAAAETFGM-----LLEASPEDPESLNYL-------GLCLL 1763

Query: 287  VEQLTETALAVTNHG----PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFI 342
              +  E AL          P    + YN A +   K +  +  + Y   + +I+  +  +
Sbjct: 1764 ELESPEAALKAFEKAALFNPKNEETLYNAATTL-IKLNRPQESIDYFDRILDISPENLDV 1822

Query: 343  FPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKA 402
              Y G+   +L++  +R AL  F+  LE  P+N + + ++G +  +    E A     +A
Sbjct: 1823 LNYKGIAFCKLEM--YREALKAFDLALEKDPENIKAIYSVGVVCFKQKMYETACRAFDEA 1880

Query: 403  AKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKG 462
              I+P   Q+   LG  L   +     DA +T   LL+    +V  + +N  GVI  + G
Sbjct: 1881 LAINPWHEQSLKYLGISLAKIEEYE--DALRTFDRLLRIRPHDV--QAMNYRGVILGKLG 1936

Query: 463  EFESAHQSFKDALGDGIWLTLLDSKTK 489
            ++  A  +F + L   ++  + D+K K
Sbjct: 1937 KYTEAINTFNEIL--RLYPEMADAKRK 1961



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 77/308 (25%), Positives = 132/308 (42%), Gaps = 18/308 (5%)

Query: 106 KEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPAL 165
           K +HF  A + +++ + +D         +G+LL  +G+ E+A  AF  +LE + + + A 
Sbjct: 357 KLQHFGEAAKSFSRTAELDPAYGDALYQQGRLLAREGKYEEALKAFDSMLEQNPEFIKAQ 416

Query: 166 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 225
             +  +    GR  ++L+   ++L+  P   G + L  GL     G+   A +A ++  +
Sbjct: 417 KLRGTMLIKLGRIEEALDSLAQSLEKEPENYG-LWLQQGLILLDNGKFEPALKALEKVAE 475

Query: 226 LDPENVEALV----ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFT 281
           L P+N    +    AL  MD          + +E  +    + PY     N   N     
Sbjct: 476 LKPDNDACWMNKGYALYSMD-------RYEEALEDFEEGLRLNPYLEKGWN---NKGIVL 525

Query: 282 GQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEF 341
           G+    E+  E      +  P    ++ N      +  DYEKA   +   +K    P + 
Sbjct: 526 GKLGRTEEALEAFEKAVSLRPDFEDAWKNRGLILLAVDDYEKASEAFDEVLK--TNPED- 582

Query: 342 IFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRK 401
           +   Y  G   LKLG   +AL  FEK+L + PD  + L +L     +LG+ E+A E   K
Sbjct: 583 LDSIYNRGTALLKLGKTETALECFEKILSLNPDYPDLLYSLAVAQAKLGKQEEALETFEK 642

Query: 402 AAKIDPRD 409
            A  +P D
Sbjct: 643 LAAKNPED 650



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 91/314 (28%), Positives = 138/314 (43%), Gaps = 40/314 (12%)

Query: 176 GRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEAL- 234
            RY D+ + + + L+++P     I L  GL   +L +L  A +AF+ A++LDP   EA  
Sbjct: 257 SRYEDAEKTFTKILKINPGNK-EIWLKKGLALIQLLRLNDAIKAFEEAIKLDPTYFEAWN 315

Query: 235 -VALAVMDLQANEAAGIRKGMEKMQRAFEIYPYC-------AMALNYLANHFFFTGQHFL 286
              LA+M L+  E A     +E      EIYP         A+AL  L  HF    + F 
Sbjct: 316 YKCLALMKLEVYEEA-----LEAFDSVLEIYPETKEIWYNRALALVKL-QHFGEAAKSF- 368

Query: 287 VEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYY 346
               + TA       P    + Y   R    +G YE+A L    S+ E N   EFI    
Sbjct: 369 ----SRTA----ELDPAYGDALYQQGRLLAREGKYEEA-LKAFDSMLEQNP--EFIKAQK 417

Query: 347 GLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKID 406
             G + +KLG    AL +  + LE  P+N       G I +  G+ E A + L K A++ 
Sbjct: 418 LRGTMLIKLGRIEEALDSLAQSLEKEPENYGLWLQQGLILLDNGKFEPALKALEKVAELK 477

Query: 407 PRDAQAFIDLGELLISSDT-GAALDAFKTARTL---LKKAGEEVPIEVLNNIGVIHFEKG 462
           P +   +++ G  L S D    AL+ F+    L   L+K          NN G++  + G
Sbjct: 478 PDNDACWMNKGYALYSMDRYEEALEDFEEGLRLNPYLEKG--------WNNKGIVLGKLG 529

Query: 463 EFESAHQSFKDALG 476
             E A ++F+ A+ 
Sbjct: 530 RTEEALEAFEKAVS 543



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 93/413 (22%), Positives = 164/413 (39%), Gaps = 53/413 (12%)

Query: 108  EHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLG 167
            E ++ A + +  A     +    W  +G  L     +E+A+ AF+  +  + +   AL  
Sbjct: 779  ERYLPALKTFESALEEKPNSDILWYYRGLSLYRINMLEEAACAFESSVRLNPEMKEALEY 838

Query: 168  QACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLD 227
            +A   F   +Y  +L+  +  L+ +P    A+     +C  +L +     +   R L+LD
Sbjct: 839  RAICLFETEQYKAALKALEAVLEGNPENLSALH-KKAICFLQLKKYKSGAETLLRVLELD 897

Query: 228  PENVEALVALAVMDLQANEAAGIRKGMEKMQRAFE-IYPYCAMALNYLANHF-------- 278
            P N E    L +   ++ E        E++    +  + YC    +Y  N+         
Sbjct: 898  PNNKEVKFELGIASFESGEYNKALSLFEEVSEGSDDSFVYCPEKNSYELNNSEQNVSEQG 957

Query: 279  --------------FFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLAR----------- 313
                           F+ Q+   +  +E +++  N+   K     N  +           
Sbjct: 958  ISEQNFSEQNNSEQNFSEQNNSEQNFSEQSISEQNNSNQKFSEQNNSKQKFSEQSISKEK 1017

Query: 314  --SYHSKG-------DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTN 364
              S++ KG        YE+A L   + + E N P  F+  +Y  G    KL   + A  +
Sbjct: 1018 YSSFYWKGLVLIRLEAYERA-LEVFSRLTE-NNPL-FVEAWYLKGISHSKLKQHKEAAKD 1074

Query: 365  FEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQA-FIDLGELLISS 423
            FEKVLE+ P   +T   LG  Y +LG  E+A  +   A K+DP +  A ++    LL S 
Sbjct: 1075 FEKVLELDPAYQDTCYQLGLSYFELGNFEEAIRVFESALKMDPENLDALYMRSLALLRSK 1134

Query: 424  DTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALG 476
              G +   F   R +LK+   +   E L ++    F++G +E A   F   L 
Sbjct: 1135 RYGESASGF---REVLKRNPSDT--EALAHLSTASFKQGFYEEALGLFDQVLS 1182



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 96/408 (23%), Positives = 155/408 (37%), Gaps = 82/408 (20%)

Query: 68  SPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYN----KASRI 123
           + E+D  Y D  Y++  +L   G Y   L   ++   E+   FI A +       K  RI
Sbjct: 371 TAELDPAYGDALYQQGRLLAREGKYEEALKAFDS-MLEQNPEFIKAQKLRGTMLIKLGRI 429

Query: 124 DM----------HEPST---WVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQAC 170
           +            EP     W+ +G +LL  G+ E A  A + V E   DN    + +  
Sbjct: 430 EEALDSLAQSLEKEPENYGLWLQQGLILLDNGKFEPALKALEKVAELKPDNDACWMNKGY 489

Query: 171 VEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPEN 230
             ++  RY ++LE ++  L+++P          G+   KLG+  +A +AF++A+ L P+ 
Sbjct: 490 ALYSMDRYEEALEDFEEGLRLNPYLEKGWN-NKGIVLGKLGRTEEALEAFEKAVSLRPDF 548

Query: 231 VEA-----LVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 285
            +A     L+ LAV D             EK   AF+                       
Sbjct: 549 EDAWKNRGLILLAVDD------------YEKASEAFD----------------------- 573

Query: 286 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 345
                      V    P    S YN   +    G  E A L     +  +N  +  +   
Sbjct: 574 ----------EVLKTNPEDLDSIYNRGTALLKLGKTETA-LECFEKILSLNPDYPDLL-- 620

Query: 346 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKI 405
           Y L   Q KLG    AL  FEK+    P++ +  +  G   +++G+ + A +   +    
Sbjct: 621 YSLAVAQAKLGKQEEALETFEKLAAKNPEDLKIQRRKGKFAMEIGKYDTALQAFDQVLSE 680

Query: 406 DPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNN 453
            P   +A+   G  LI       L  F+ A T    A +EV +  LNN
Sbjct: 681 KPESREAWYRKGLALIK------LKRFEEAIT----AFDEVIVRNLNN 718



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 119/526 (22%), Positives = 211/526 (40%), Gaps = 57/526 (10%)

Query: 108 EHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASS-AFKIVLEADRDNVPALL 166
           E F  A + Y+ A  I+   P  W  KG L  A+ E  +AS   F+  +E + +   A  
Sbjct: 87  EKFEAALETYDNALEINPDNPKIWYQKG-LAFAELEKNEASILCFEKAIELEPECGSAWY 145

Query: 167 GQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQL 226
            +  V    G Y ++LE ++ AL+++P    A     GL    L + G+A + F   ++ 
Sbjct: 146 ARGTVTGKTGNYEEALECFEHALEINPKNSDAC-YSKGLVLANLEKYGEALECFDSLIRE 204

Query: 227 DPENVEALVA--LAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQH 284
            P + +A      +++ L  NE A     +E +      +P    AL Y           
Sbjct: 205 KPRHKDAWKQKYFSLIKLGKNEEA-----LECVDAFLRKFPVSETAL-YQKGILLNELSR 258

Query: 285 FLVEQLTETALAVTNHGPT-----KSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPH 339
           +   + T T +   N G       K  +   L R   +   +E+A       +K ++  +
Sbjct: 259 YEDAEKTFTKILKINPGNKEIWLKKGLALIQLLRLNDAIKAFEEA-------IK-LDPTY 310

Query: 340 EFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELL 399
              + Y  L  ++L++  +  AL  F+ VLEIYP+  E         V+L    +A +  
Sbjct: 311 FEAWNYKCLALMKLEV--YEEALEAFDSVLEIYPETKEIWYNRALALVKLQHFGEAAKSF 368

Query: 400 RKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHF 459
            + A++DP    A    G LL  +  G   +A K   ++L++  E +  + L    +I  
Sbjct: 369 SRTAELDPAYGDALYQQGRLL--AREGKYEEALKAFDSMLEQNPEFIKAQKLRGTMLIKL 426

Query: 460 EKGEFESAHQSFKDALGD-----GIWL----TLLDSKTKTYVIDASASMLQFKDMQLFHR 510
             G  E A  S   +L       G+WL     LLD+      + A   + + K       
Sbjct: 427 --GRIEEALDSLAQSLEKEPENYGLWLQQGLILLDNGKFEPALKALEKVAELKP------ 478

Query: 511 FENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAK 570
            +ND   +    NK   L+++ R  E + D        RL  +  + + +  + L  + +
Sbjct: 479 -DNDACWM----NKGYALYSMDRYEEALEDFEEG---LRLNPYLEKGWNNKGIVLGKLGR 530

Query: 571 ARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF 616
                  ++E   +A+ +   + +A    G + L  DD+ KA E F
Sbjct: 531 TEE----ALEAFEKAVSLRPDFEDAWKNRGLILLAVDDYEKASEAF 572



 Score = 53.1 bits (126), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 91/394 (23%), Positives = 153/394 (38%), Gaps = 48/394 (12%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
           A + + K  +I+      W+ KG  L+    +  A  AF+  ++ D     A   +    
Sbjct: 262 AEKTFTKILKINPGNKEIWLKKGLALIQLLRLNDAIKAFEEAIKLDPTYFEAWNYKCLAL 321

Query: 173 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 232
                Y ++LE +   L+++P     I     L   KL   G+A ++F R  +LDP   +
Sbjct: 322 MKLEVYEEALEAFDSVLEIYPETK-EIWYNRALALVKLQHFGEAAKSFSRTAELDPAYGD 380

Query: 233 ALV--------------ALAVMD--LQAN----EAAGIRKGME-KMQRAFEIYPYCAMAL 271
           AL               AL   D  L+ N    +A  +R  M  K+ R  E     A +L
Sbjct: 381 ALYQQGRLLAREGKYEEALKAFDSMLEQNPEFIKAQKLRGTMLIKLGRIEEALDSLAQSL 440

Query: 272 NYLANHFFFTGQHFLV-------EQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 324
                ++    Q  L+       E   +    V    P     + N   + +S   YE+A
Sbjct: 441 EKEPENYGLWLQQGLILLDNGKFEPALKALEKVAELKPDNDACWMNKGYALYSMDRYEEA 500

Query: 325 GLYYMASVKEINKPHEFIFPYY-----GLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 379
              +   ++        + PY        G V  KLG    AL  FEK + + PD  +  
Sbjct: 501 LEDFEEGLR--------LNPYLEKGWNNKGIVLGKLGRTEEALEAFEKAVSLRPDFEDAW 552

Query: 380 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTL 438
           K  G I + +   EKA E   +  K +P D  +  + G  L+    T  AL+ F+   +L
Sbjct: 553 KNRGLILLAVDDYEKASEAFDEVLKTNPEDLDSIYNRGTALLKLGKTETALECFEKILSL 612

Query: 439 LKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFK 472
                 + P ++L ++ V   + G+ E A ++F+
Sbjct: 613 ----NPDYP-DLLYSLAVAQAKLGKQEEALETFE 641



 Score = 47.8 bits (112), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 79/390 (20%), Positives = 143/390 (36%), Gaps = 100/390 (25%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
           A + + KA  +       W  +G +LLA  + E+AS AF  VL+ + +++ ++  +    
Sbjct: 534 ALEAFEKAVSLRPDFEDAWKNRGLILLAVDDYEKASEAFDEVLKTNPEDLDSIYNRGTAL 593

Query: 173 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLG--------------------- 211
              G+   +LE +++ L ++P  P  +   + + + KLG                     
Sbjct: 594 LKLGKTETALECFEKILSLNPDYPDLL-YSLAVAQAKLGKQEEALETFEKLAAKNPEDLK 652

Query: 212 ----------QLGK---ARQAFQRALQLDPENVEALV--ALAVMDLQANEAAGIRKGMEK 256
                     ++GK   A QAF + L   PE+ EA     LA++ L+  E A        
Sbjct: 653 IQRRKGKFAMEIGKYDTALQAFDQVLSEKPESREAWYRKGLALIKLKRFEEA-------- 704

Query: 257 MQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYH 316
                 I  +  + +  L N       +  ++ L    +       TK   Y +    Y 
Sbjct: 705 ------ITAFDEVIVRNLNNKEISNSDYEELKNLDRDDIDNPARDETKRPDYEDENPDYE 758

Query: 317 SK-GDYEKAGLY----------YMASVKEI-----NKPHEFIFPYY-GLGQVQLKLGD-- 357
            +  DYE A  Y          Y+ ++K        KP+  I  YY GL   ++ + +  
Sbjct: 759 DENSDYENARTYKGFAQMQLERYLPALKTFESALEEKPNSDILWYYRGLSLYRINMLEEA 818

Query: 358 ------------------------------FRSALTNFEKVLEIYPDNCETLKALGHIYV 387
                                         +++AL   E VLE  P+N   L      ++
Sbjct: 819 ACAFESSVRLNPEMKEALEYRAICLFETEQYKAALKALEAVLEGNPENLSALHKKAICFL 878

Query: 388 QLGQIEKAQELLRKAAKIDPRDAQAFIDLG 417
           QL + +   E L +  ++DP + +   +LG
Sbjct: 879 QLKKYKSGAETLLRVLELDPNNKEVKFELG 908



 Score = 47.4 bits (111), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 74/316 (23%), Positives = 125/316 (39%), Gaps = 24/316 (7%)

Query: 96  LGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVL 155
           LG I+ K+ EK      +   +NK    D         +G  LL   + E+A  +F  VL
Sbjct: 13  LGLIKQKRYEK------SINVFNKIVDKDSGHTGALFNRGLALLKIKKPEEALDSFDQVL 66

Query: 156 EADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGK 215
             + +N  AL  +        ++  +LE Y  AL+++P  P  I    GL   +L +   
Sbjct: 67  HFEPENFDALYKKGIALATLEKFEAALETYDNALEINPDNP-KIWYQKGLAFAELEKNEA 125

Query: 216 ARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY----CAMAL 271
           +   F++A++L+PE   A  A   +     +     + +E  + A EI P     C    
Sbjct: 126 SILCFEKAIELEPECGSAWYARGTV---TGKTGNYEEALECFEHALEINPKNSDACYSKG 182

Query: 272 NYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMAS 331
             LAN   +       + L         H       Y++L +     G  E+A     A 
Sbjct: 183 LVLANLEKYGEALECFDSLIREK---PRHKDAWKQKYFSLIKL----GKNEEALECVDAF 235

Query: 332 VKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQ 391
           +++       +   Y  G +  +L  +  A   F K+L+I P N E     G   +QL +
Sbjct: 236 LRKFPVSETAL---YQKGILLNELSRYEDAEKTFTKILKINPGNKEIWLKKGLALIQLLR 292

Query: 392 IEKAQELLRKAAKIDP 407
           +  A +   +A K+DP
Sbjct: 293 LNDAIKAFEEAIKLDP 308



 Score = 45.1 bits (105), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 79/363 (21%), Positives = 149/363 (41%), Gaps = 74/363 (20%)

Query: 129  STWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRA 188
            S++  KG +L+     E+A   F  + E +   V A   +        ++ ++ + +++ 
Sbjct: 1019 SSFYWKGLVLIRLEAYERALEVFSRLTENNPLFVEAWYLKGISHSKLKQHKEAAKDFEKV 1078

Query: 189  LQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQAN--- 245
            L++ P+        +GL  ++LG   +A + F+ AL++DPEN++AL   ++  L++    
Sbjct: 1079 LELDPAYQDTC-YQLGLSYFELGNFEEAIRVFESALKMDPENLDALYMRSLALLRSKRYG 1137

Query: 246  -EAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTK 304
              A+G R+                                            V    P+ 
Sbjct: 1138 ESASGFRE--------------------------------------------VLKRNPSD 1153

Query: 305  SHSYYNLARSYHSKGDYEKA-GLYYMASVKEINKPHEFIFPYYGLGQVQLK-LGDFRSAL 362
            + +  +L+ +   +G YE+A GL+     K  N   + +    G   V LK LG+ + A 
Sbjct: 1154 TEALAHLSTASFKQGFYEEALGLFDQVLSK--NPERKTVLFRKG---VALKALGEVKRAS 1208

Query: 363  TNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQ-------AFID 415
            T F+ VL++ PD    L+   + + +L +  +A E  + A +   +          AF  
Sbjct: 1209 TIFDSVLKLKPDCTYALEQKAYTHFELEEYPEAVEAFKTALEYCQKKEDLYYYRGIAFFR 1268

Query: 416  LGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
            LG      +   A+ +F+ A  L    G + P E+    G+ +FE  E+E A + F   L
Sbjct: 1269 LG------NFEEAVRSFENALDL----GCQQP-EISYYTGIAYFENREYEKAVEIFNAIL 1317

Query: 476  GDG 478
              G
Sbjct: 1318 DSG 1320



 Score = 40.4 bits (93), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 53/189 (28%), Positives = 81/189 (42%), Gaps = 11/189 (5%)

Query: 348  LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 407
            +G  QLKL  + +A+  FEK+LE+ P+  +     G     L Q E+A E    A ++DP
Sbjct: 1551 MGLSQLKLEHYEAAIEIFEKLLEVKPEASDLWYVAGLALRGLDQDEQAVEAFENAVELDP 1610

Query: 408  RDAQAFIDLG-ELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFES 466
                A+  +G  LL  +    A  AF +A TL         +  L +     F+   FE 
Sbjct: 1611 ALEAAWEQIGLSLLRLNMYEEASQAFSSALTLKPDN-----VNALYSRSEASFQLQHFEE 1665

Query: 467  AHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQ--FKDMQLFH-RFENDGNHVELPWN 523
            A Q  +  L        L+S    Y +  +   LQ   K ++ F    + D  H E  + 
Sbjct: 1666 AAQDLEKVLLSAP--DFLNSIEACYRLGIARMELQECEKALEAFDIVLQQDPAHREALYY 1723

Query: 524  KVTVLFNLA 532
            +  VLFNL+
Sbjct: 1724 RGLVLFNLS 1732


>gi|422302736|ref|ZP_16390095.1| Genome sequencing data, contig C313 [Microcystis aeruginosa PCC
           9806]
 gi|389787980|emb|CCI16710.1| Genome sequencing data, contig C313 [Microcystis aeruginosa PCC
           9806]
          Length = 565

 Score = 76.3 bits (186), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 80/286 (27%), Positives = 136/286 (47%), Gaps = 29/286 (10%)

Query: 134 KGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHP 193
           +G  LLA+GE E A SA++ VL  D ++V A +  A V  ++ RYS++LE Y RA  V+ 
Sbjct: 44  QGDQLLAEGEKESALSAYRTVLSFDENSVQAHIKIAQVLQSQKRYSEALEAYDRAFIVND 103

Query: 194 SCP-----GAIRLGIGLCRYKLGQLGKARQAFQRALQLDPE-NVEALVALAVMDLQA-NE 246
             P         + +G    +  +  +A  A+Q+A+ + P    +  +  A+  LQ  +E
Sbjct: 104 QPPMEPSQSNYLVALGDIFAQEEKWSEAIDAYQKAMIIKPTFKGQFQLGKALYSLQRWDE 163

Query: 247 AAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG----P 302
           AA      + +Q A  + P    A       +F+ G+ +  +QL   A           P
Sbjct: 164 AA------KALQAAVFLDPSQGKA-------YFYLGKAYSEQQLWPEASYAYQQALELIP 210

Query: 303 TKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEF-IFPYYGLGQVQLKLGDFRSA 361
            +  +Y  L  +   +G +E+A   Y  ++  I  P +  I+ Y  LGQ   + G   +A
Sbjct: 211 NQGETYKKLGETLAKQGKWEEAEQIYRQAL--IYSPKDGDIYNY--LGQALAEQGKLGAA 266

Query: 362 LTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 407
           +  F++  +I P N E  + L +IY+  GQI++     R+A +IDP
Sbjct: 267 MAVFQQARQISPKNAEIYENLCYIYINNGQIDEGLNWCRQAVEIDP 312


>gi|428771391|ref|YP_007163181.1| hypothetical protein Cyan10605_3080 [Cyanobacterium aponinum PCC
           10605]
 gi|428685670|gb|AFZ55137.1| Tetratricopeptide TPR_1 repeat-containing protein [Cyanobacterium
           aponinum PCC 10605]
          Length = 1134

 Score = 76.3 bits (186), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 93/357 (26%), Positives = 158/357 (44%), Gaps = 60/357 (16%)

Query: 174 NRGRYSDSLEFYKRALQV--------HPSCPGAIRLGIGLCRYKLGQLGKARQAFQRAL- 224
           N+G Y  +   Y+ ALQV        HP    A+   +GL     G   KA+  ++RAL 
Sbjct: 186 NQGNYEGAQPLYEEALQVYFLVLGENHPDTATAMN-NLGLLYQYQGDYQKAQNFYERALT 244

Query: 225 -------QLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIY--------PYCAM 269
                  Q  P+  + L  +A++   A       +     + A  IY        P  A 
Sbjct: 245 VRKQVSGQKSPDVAQTLNNMALL---AENKGDYPRAEALYKEAIAIYREVLGNNHPDTAT 301

Query: 270 ALNYLANHFFFTGQHFLVEQLTETALAVTNH-----GPTKSHSYYNLARSYHSKGDYEKA 324
           +LN L   +++ G +   E L +  LA+         P  + S  NLA  YHS+G++++A
Sbjct: 302 SLNNLGLLYYYQGNYIAAEPLFKETLAIRQQILGAKHPDVALSLNNLALLYHSQGNHQEA 361

Query: 325 GLYYMASV---KEI---NKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEI------- 371
              Y  ++   KE+   N P+        LG++    G++ SA   +++ L I       
Sbjct: 362 ESLYQDAIAIQKEVLGKNHPNTAT-SLNNLGELYRIQGNYESAQPLYQESLSIRLKVLGE 420

Query: 372 -YPDNCETLKALGHIYVQLGQIEKAQELLRKAAKI--------DPRDAQAFIDLGELL-I 421
            +PD  ++L  L  +Y  LG  + A+EL ++A KI         P  A +F +LGEL  I
Sbjct: 421 KHPDTAQSLNNLALLYYSLGDYQTAEELYQQALKIHQEVLGEKHPFTATSFNNLGELYRI 480

Query: 422 SSDTGAALDAFKTARTLLKKA-GEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDAL 475
                 A   ++ + T+ K+  GE  P   +  NN+ ++++ +G ++SA   +K A+
Sbjct: 481 QGKYETAAPFYQQSLTIRKEILGENHPDVAQSFNNLALLYYNQGNYQSAEPLYKQAI 537


>gi|381160360|ref|ZP_09869592.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
           [Thiorhodovibrio sp. 970]
 gi|380878424|gb|EIC20516.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
           [Thiorhodovibrio sp. 970]
          Length = 914

 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 93/360 (25%), Positives = 154/360 (42%), Gaps = 54/360 (15%)

Query: 119 KASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLE--ADRDNVPALLGQACVEFNRG 176
           +A ++D H  S    + +LL A+GE+ +A ++++  LE   ++ N    LG    E   G
Sbjct: 169 RALQLDSHLASAHANRARLLRARGELMEAEASYRRALELAPEQPNTHYNLGNLLEEL--G 226

Query: 177 RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVA 236
           R  D+   Y+ AL++ P    A    +G   +  G+L +AR+AF +A+   P+  +A + 
Sbjct: 227 RVDDAEHSYREALRLQPRFAAAAN-NLGAILHADGRLEQAREAFVQAIADAPDLADAHLN 285

Query: 237 LAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALA 296
           L ++  + NE    R  +E+   A  + P C  A + L               LT+  L 
Sbjct: 286 LGIVTRELNEPEQARGLLEQ---AVALDPECGDAWHQLG--------------LTQARLE 328

Query: 297 VTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASV-KEINKPHEFIFPYYGLGQVQLKL 355
                                  D+EKA      SV + +    E    +  L QV + L
Sbjct: 329 -----------------------DFEKA----RDSVERALELSPENADCHLTLAQVHVML 361

Query: 356 GDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFID 415
            D+ SA+  +   L + P +  T  ALG+ +  L Q  +A+E  R+A   DPR AQA   
Sbjct: 362 EDYPSAIGCYHNALALTPAHAPTWVALGNAHTSLEQHTQAEEAYRRAITADPRCAQAHAQ 421

Query: 416 LGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
           LG  L     G        A      A E   +  L  +G +  E G+ E++ ++++ AL
Sbjct: 422 LGFCL----NGQQRYQEALAALDQALALEPDSVLALGTLGRVRMELGQLEASAEAYRRAL 477



 Score = 43.5 bits (101), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 74/308 (24%), Positives = 130/308 (42%), Gaps = 54/308 (17%)

Query: 348 LGQVQL--KLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKI 405
           LG+V    + GD ++AL   E+V   +P      ++L  IY QLG++  A    R+A  +
Sbjct: 80  LGRVTTLAQAGDLQAALALNEQVTRGWPQQAAGWRSLTDIYRQLGRLPDAIAAAREAIAL 139

Query: 406 DPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFE----- 460
            P DA    +L  LLIS    A  DA       L++A     +++ +++   H       
Sbjct: 140 APGDASGHANLASLLISGGDLAQADAS------LERA-----LQLDSHLASAHANRARLL 188

Query: 461 --KGEFESAHQSFKDALGDGIWLTLLDSKTKTY------------VIDASASMLQFKDMQ 506
             +GE   A  S++ A      L L   +  T+            V DA  S  +   ++
Sbjct: 189 RARGELMEAEASYRRA------LELAPEQPNTHYNLGNLLEELGRVDDAEHSYREA--LR 240

Query: 507 LFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLA 566
           L  RF    N      N   +L    R LEQ  +    ++          D  DA+L L 
Sbjct: 241 LQPRFAAAAN------NLGAILHADGR-LEQAREAFVQAI------ADAPDLADAHLNLG 287

Query: 567 AIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAASDATDG 625
            + +  N  + +  L+ +A+ ++ +  +A   LG  + + +D+ KA+++  RA   + + 
Sbjct: 288 IVTRELNEPEQARGLLEQAVALDPECGDAWHQLGLTQARLEDFEKARDSVERALELSPEN 347

Query: 626 KDSYATLS 633
            D + TL+
Sbjct: 348 ADCHLTLA 355


>gi|449116347|ref|ZP_21752798.1| hypothetical protein HMPREF9726_00783 [Treponema denticola H-22]
 gi|448954234|gb|EMB35017.1| hypothetical protein HMPREF9726_00783 [Treponema denticola H-22]
          Length = 415

 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 90/346 (26%), Positives = 152/346 (43%), Gaps = 21/346 (6%)

Query: 138 LLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPG 197
           LL    + +A + FK +LE D  N  AL+G    E    +++++++FYK+ L+ HPS   
Sbjct: 70  LLKGNSITEAINVFKKILELDPTNNYALVGLGDAERKNNKFNEAIKFYKQCLEHHPSNNY 129

Query: 198 AIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKM 257
           A+  G+  C   + Q  +A   ++  L+ D +N+  L  +A    +  E     K  +  
Sbjct: 130 AL-FGLADCYKSMNQFPRAIAIWEEYLKFDDKNITVLTRVADAYRKTKE---FEKAEKLY 185

Query: 258 QRAFEIYPYCAMALNYLA--NHFFFTGQHFLV--EQLTETALAVTNHGPTKSHSYYNLAR 313
           Q+  E  P  A AL  L   N+ F   +  LV  E++ E++  + +     S     +  
Sbjct: 186 QKVLEKSPKNAYALIGLGHLNYDFKKYREALVYWEKVMESSGELVDIRILTS-----IGN 240

Query: 314 SYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYP 373
            Y     +++ G+YY     E   P  F +  +GL      L    +++  ++K+LE+ P
Sbjct: 241 CYRKMKLFDR-GVYYFERALE-RSPDNF-YGLFGLADCYRGLNQQYNSIVYWKKILELDP 297

Query: 374 DNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFK 433
           +N   L  +G  Y  +   EKA+E  +KA  ID  D+ A + L    I        D   
Sbjct: 298 NNKVILTRIGDAYRSMNDFEKAKESYQKALDID-FDSYAMLGLA---ILCKLQQKYDQAI 353

Query: 434 TARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGI 479
           T  T LK  G +    V   +   + EK E + A ++  D    GI
Sbjct: 354 TTLTHLKDTG-DTNYRVYLELAQCYIEKKEKQKAIETLIDFQKLGI 398


>gi|449108889|ref|ZP_21745530.1| hypothetical protein HMPREF9722_01226 [Treponema denticola ATCC
           33520]
 gi|448961164|gb|EMB41872.1| hypothetical protein HMPREF9722_01226 [Treponema denticola ATCC
           33520]
          Length = 415

 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 90/346 (26%), Positives = 152/346 (43%), Gaps = 21/346 (6%)

Query: 138 LLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPG 197
           LL    + +A + FK +LE D  N  AL+G    E    +++++++FYK+ L+ HPS   
Sbjct: 70  LLKGNSITEAINVFKKILELDPTNNYALVGLGDAERKNNKFNEAIKFYKQCLEHHPSNNY 129

Query: 198 AIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKM 257
           A+  G+  C   + Q  +A   ++  L+ D +N+  L  +A    +  E     K  +  
Sbjct: 130 AL-FGLADCYKSMNQFPRAIAIWEEYLKFDDKNITVLTRVADAYRKTKE---FEKAEKLY 185

Query: 258 QRAFEIYPYCAMALNYLA--NHFFFTGQHFLV--EQLTETALAVTNHGPTKSHSYYNLAR 313
           Q+  E  P  A AL  L   N+ F   +  LV  E++ E++  + +     S     +  
Sbjct: 186 QKVLEKSPKNAYALIGLGHLNYDFKKYREALVYWEKVMESSGELVDIRILTS-----IGN 240

Query: 314 SYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYP 373
            Y     +++ G+YY     E   P  F +  +GL      L    +++  ++K+LE+ P
Sbjct: 241 CYRKMKLFDR-GVYYFERALE-RSPDNF-YGLFGLADCYRGLNQQYNSIVYWKKILELDP 297

Query: 374 DNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFK 433
           +N   L  +G  Y  +   EKA+E  +KA  ID  D+ A + L    I        D   
Sbjct: 298 NNKVILTRIGDAYRSMNDFEKAKESYQKALDID-FDSYAMLGLA---ILCKLQQKYDQAI 353

Query: 434 TARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGI 479
           T  T LK  G +    V   +   + EK E + A ++  D    GI
Sbjct: 354 TTLTHLKDTG-DTNYRVYLELAQCYIEKKEKQKAIETLIDFQKLGI 398


>gi|449127888|ref|ZP_21764158.1| hypothetical protein HMPREF9733_01561 [Treponema denticola SP33]
 gi|448943220|gb|EMB24112.1| hypothetical protein HMPREF9733_01561 [Treponema denticola SP33]
          Length = 415

 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 90/346 (26%), Positives = 152/346 (43%), Gaps = 21/346 (6%)

Query: 138 LLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPG 197
           LL    + +A + FK +LE D  N  AL+G    E    +++++++FYK+ L+ HPS   
Sbjct: 70  LLKGNSITEAINVFKKILELDPTNNYALVGLGDAERKNNKFNEAIQFYKQCLEHHPSNNY 129

Query: 198 AIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKM 257
           A+  G+  C   + Q  +A   ++  L+ D +N+  L  +A    +  E     K  +  
Sbjct: 130 AL-FGLADCYKSMNQFPRAIAIWEEYLKFDDKNITVLTRVADAYRKTKE---FEKAEKLY 185

Query: 258 QRAFEIYPYCAMALNYLA--NHFFFTGQHFLV--EQLTETALAVTNHGPTKSHSYYNLAR 313
           Q+  E  P  A AL  L   N+ F   +  LV  E++ E++  + +     S     +  
Sbjct: 186 QKVLEKSPKNAYALIGLGHLNYDFKKYREALVYWEKVMESSGELVDIRILTS-----IGN 240

Query: 314 SYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYP 373
            Y     +++ G+YY     E   P  F +  +GL      L    +++  ++K+LE+ P
Sbjct: 241 CYRKMKLFDR-GIYYFERALE-RAPDNF-YGLFGLADCYRGLNQQYNSIVYWKKILELDP 297

Query: 374 DNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFK 433
           +N   L  +G  Y  +   EKA+E  +KA  ID  D+ A + L    I        D   
Sbjct: 298 NNKVILTRIGDAYRSMNDFEKAKENYQKALDID-FDSYAMLGLA---ILCKLQQKYDQAI 353

Query: 434 TARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGI 479
           T  T LK   E+    V   +   + EK E + A ++  D    GI
Sbjct: 354 TTLTHLKDT-EDTNYRVYLELAQCYIEKKEKQKAIETLMDFQKLGI 398


>gi|328952032|ref|YP_004369366.1| hypothetical protein Desac_0294 [Desulfobacca acetoxidans DSM
           11109]
 gi|328452356|gb|AEB08185.1| Tetratricopeptide TPR_2 repeat-containing protein [Desulfobacca
           acetoxidans DSM 11109]
          Length = 599

 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 95/417 (22%), Positives = 175/417 (41%), Gaps = 64/417 (15%)

Query: 211 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 270
           G L  A ++++ A+Q DP++ +  + +A + ++  +   I++ +  +++A  + P     
Sbjct: 83  GNLEDALRSYEAAIQCDPKSAQLEIEMAALLIRKGD---IKEALAHLEKAISLDP----- 134

Query: 271 LNYLANHFFFTGQHFLVEQLTETAL---AVTNHGPTKSHSYYNLARSYHSKGDYEKAGLY 327
            N+L  H    G H  + QL E       +    P    +   LA  +  +G+  KA   
Sbjct: 135 -NHLEAHQLLAGLHTGMNQLREATTEYEKIITLDPANEEAVIFLATLHAQQGNCAKAVNL 193

Query: 328 YMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYV 387
               +K+   P +FI  +Y LG+  ++LG   +A   F++ L   P+    +  LG +Y 
Sbjct: 194 LKNLIKK--NPDQFIALFY-LGKCYIELGQLTAAKKEFQQALHKQPEFLPAMLELGFVYE 250

Query: 388 QLGQIEKAQELLRKAAKIDPRDAQAFIDLGEL-LISSDTGAALDAFKTARTLLKKAGEEV 446
              +  +A+ + R+  + DP + +A+  LG L L++     AL AF      +K+  +  
Sbjct: 251 LEKRYSQAKTMYRRILRHDPDNQRAWASLGRLYLLNDQYTEALQAFGE----IKRISKNE 306

Query: 447 PIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQ 506
           P E    IG++ FE+  F+ A + F++                                 
Sbjct: 307 P-ETALRIGLLFFEQKYFDDAIREFREV-------------------------------- 333

Query: 507 LFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLA 566
           L  R   D              F LA  LE+  D VAA   Y  I  + + Y+ A LR+A
Sbjct: 334 LISRKGPDQAR-----------FFLAAALEEKGDLVAAMREYEQISRQSESYIPARLRMA 382

Query: 567 AIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDAT 623
            I   +  +   I+++ ++L +  K  +    L     +  ++VKA ET   A + T
Sbjct: 383 YILGRQKKISQGIKIIKDSLVLFPKNGDLYLTLAAFYEEEQEYVKAIETLNQALENT 439



 Score = 48.1 bits (113), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 78/336 (23%), Positives = 147/336 (43%), Gaps = 25/336 (7%)

Query: 146 QASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGL 205
           QA + ++ +L  D DN  A      +     +Y+++L+ +    ++  + P    L IGL
Sbjct: 257 QAKTMYRRILRHDPDNQRAWASLGRLYLLNDQYTEALQAFGEIKRISKNEP-ETALRIGL 315

Query: 206 CRYKLGQLGKARQAFQRAL--QLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEI 263
             ++      A + F+  L  +  P+     +A A ++ + +  A +R+  E++ R  E 
Sbjct: 316 LFFEQKYFDDAIREFREVLISRKGPDQARFFLA-AALEEKGDLVAAMRE-YEQISRQSES 373

Query: 264 YPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEK 323
           Y    + + Y+       G+   + Q  +         P     Y  LA  Y  + +Y K
Sbjct: 374 YIPARLRMAYI------LGRQKKISQGIKIIKDSLVLFPKNGDLYLTLAAFYEEEQEYVK 427

Query: 324 AGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALG 383
           A      +++    P E    Y+ L  V  K  +   +    +KVLE+ P+N E L  LG
Sbjct: 428 AIETLNQALENTVNPSEV---YFRLAVVYDKKKENAESQRLIKKVLELEPNNAEALNFLG 484

Query: 384 HIY-VQLGQIEKAQELLRKAAKIDPRDAQAFID-LGELLISSDTGAALDAFKTARTLLKK 441
           ++Y  Q   +++A+ L++ A  I P DA   ID LG +            +  A  +L+K
Sbjct: 485 YMYACQGANLDEAERLIQTALAIKP-DAGYIIDSLGWVYYKKGL------YDQAVLILEK 537

Query: 442 AGEEVPIE--VLNNIGVIHFEKGEFESAHQSFKDAL 475
           A +++P +  +  ++G  + +K  F  A + +K AL
Sbjct: 538 AHQQMPQDGTIAEHLGDAYMKKSRFRDALRLYKKAL 573



 Score = 40.0 bits (92), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 83/397 (20%), Positives = 166/397 (41%), Gaps = 87/397 (21%)

Query: 142 GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 201
            ++ +A++ ++ ++  D  N  A++  A +   +G  + ++   K  ++ +P    A+  
Sbjct: 151 NQLREATTEYEKIITLDPANEEAVIFLATLHAQQGNCAKAVNLLKNLIKKNPDQFIAL-F 209

Query: 202 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA-VMDLQA---------------- 244
            +G C  +LGQL  A++ FQ+AL   PE + A++ L  V +L+                 
Sbjct: 210 YLGKCYIELGQLTAAKKEFQQALHKQPEFLPAMLELGFVYELEKRYSQAKTMYRRILRHD 269

Query: 245 --NEAAGIRKG---------MEKMQRAFEIY------PYCAMALNYLANHFFFTGQHF-- 285
             N+ A    G          E +Q   EI       P  A+ +  L    FF  ++F  
Sbjct: 270 PDNQRAWASLGRLYLLNDQYTEALQAFGEIKRISKNEPETALRIGLL----FFEQKYFDD 325

Query: 286 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGD-------YEKAG------------- 325
            + +  E  + ++  GP ++  +  LA +   KGD       YE+               
Sbjct: 326 AIREFRE--VLISRKGPDQARFF--LAAALEEKGDLVAAMREYEQISRQSESYIPARLRM 381

Query: 326 LYYMASVKEINKPHEFI------FP-----YYGLGQVQLKLGDFRSALTNFEKVLEIYPD 374
            Y +   K+I++  + I      FP     Y  L     +  ++  A+    + LE   +
Sbjct: 382 AYILGRQKKISQGIKIIKDSLVLFPKNGDLYLTLAAFYEEEQEYVKAIETLNQALENTVN 441

Query: 375 NCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDA--- 431
             E    L  +Y +  +  ++Q L++K  +++P +A+A   LG +      GA LD    
Sbjct: 442 PSEVYFRLAVVYDKKKENAESQRLIKKVLELEPNNAEALNFLGYMYACQ--GANLDEAER 499

Query: 432 -FKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESA 467
             +TA  +   AG      +++++G ++++KG ++ A
Sbjct: 500 LIQTALAIKPDAG-----YIIDSLGWVYYKKGLYDQA 531


>gi|124024101|ref|YP_001018408.1| hypothetical protein P9303_24101 [Prochlorococcus marinus str. MIT
           9303]
 gi|123964387|gb|ABM79143.1| Hypothetical protein P9303_24101 [Prochlorococcus marinus str. MIT
           9303]
          Length = 725

 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 84/343 (24%), Positives = 145/343 (42%), Gaps = 46/343 (13%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
           A +    + R D   P  +   G++L   G+ E A   F+  L+ ++         A   
Sbjct: 59  AVELIQASIREDESNPIPFFNLGKILAIAGQHENAVGVFQEALKRNQQIPETWFCFANAL 118

Query: 173 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 232
              G+  ++ + Y+ ALQ++P+  GA    +G      G+L +A Q F +A+   P NV 
Sbjct: 119 REIGKTEEAKQAYRNALQLNPAHAGAAG-NLGALLTDDGELDEAEQLFVKAVDQYPNNVN 177

Query: 233 ALV------------ALAVMDLQ----------------AN---EAAGIRKGMEKMQRAF 261
             +            A A+M  Q                AN   E   + + +   ++A 
Sbjct: 178 LRINYGRLLAEKAEHAAAIMQYQIALPLAPQSPELHYNFANALKEEGDVEEAIASYRKAI 237

Query: 262 EIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG----PTKSHSYYNLARSYHS 317
           E+ P         A+ +F  G     E   E A+A         P  + +Y+ L      
Sbjct: 238 EVKPD-------FADAYFALGLVMKEEGDVEEAIASYRKAIEVKPDFADAYFALGLVMKE 290

Query: 318 KGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCE 377
           +GD E+A   Y  +++   KP +F   Y+ LG V  + GD   A+ ++ K +E+ PD  +
Sbjct: 291 EGDVEEAIASYRKAIE--VKP-DFADAYFALGLVMKEEGDVEEAIASYRKAIEVKPDFAD 347

Query: 378 TLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 420
              ALG +  + G +E+A    RKA ++ P  A A+++LG +L
Sbjct: 348 AYFALGLVMKEEGDVEEAIASYRKAIEVKPDFADAYLNLGNVL 390



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 93/378 (24%), Positives = 167/378 (44%), Gaps = 70/378 (18%)

Query: 143 EVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCP------ 196
           +++ A + FK +L  +     AL    C+  +RG++  ++E  + +++   S P      
Sbjct: 21  DLDGAEAVFKQILAVNPKEPNALHLLGCIYKDRGQHQQAVELIQASIREDESNPIPFFNL 80

Query: 197 -------GAIRLGIGLCRYKL--------------------GQLGKARQAFQRALQLDPE 229
                  G     +G+ +  L                    G+  +A+QA++ ALQL+P 
Sbjct: 81  GKILAIAGQHENAVGVFQEALKRNQQIPETWFCFANALREIGKTEEAKQAYRNALQLNPA 140

Query: 230 NVEA---LVALAVMDLQANEAAGIRKGMEKMQRAFEIYP-YCAMALNYLANHFFFTGQHF 285
           +  A   L AL   D + +EA  +        +A + YP    + +NY        G+  
Sbjct: 141 HAGAAGNLGALLTDDGELDEAEQL------FVKAVDQYPNNVNLRINY--------GR-- 184

Query: 286 LVEQLTETALAVTNH------GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPH 339
           L+ +  E A A+  +       P     +YN A +   +GD E+A   Y  +++   KP 
Sbjct: 185 LLAEKAEHAAAIMQYQIALPLAPQSPELHYNFANALKEEGDVEEAIASYRKAIE--VKP- 241

Query: 340 EFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELL 399
           +F   Y+ LG V  + GD   A+ ++ K +E+ PD  +   ALG +  + G +E+A    
Sbjct: 242 DFADAYFALGLVMKEEGDVEEAIASYRKAIEVKPDFADAYFALGLVMKEEGDVEEAIASY 301

Query: 400 RKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIGVI 457
           RKA ++ P  A A+  LG  L+  + G   +A  + R    KA E  P   +    +G++
Sbjct: 302 RKAIEVKPDFADAYFALG--LVMKEEGDVEEAIASYR----KAIEVKPDFADAYFALGLV 355

Query: 458 HFEKGEFESAHQSFKDAL 475
             E+G+ E A  S++ A+
Sbjct: 356 MKEEGDVEEAIASYRKAI 373



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 63/291 (21%), Positives = 132/291 (45%), Gaps = 18/291 (6%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
           A Q Y  A +++          G LL   GE+++A   F   ++   +NV   +    + 
Sbjct: 127 AKQAYRNALQLNPAHAGAAGNLGALLTDDGELDEAEQLFVKAVDQYPNNVNLRINYGRLL 186

Query: 173 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 232
             +  ++ ++  Y+ AL + P  P  +         + G + +A  ++++A+++ P+  +
Sbjct: 187 AEKAEHAAAIMQYQIALPLAPQSP-ELHYNFANALKEEGDVEEAIASYRKAIEVKPDFAD 245

Query: 233 ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTE 292
           A  AL ++     E   + + +   ++A E+ P         A+ +F  G     E   E
Sbjct: 246 AYFALGLV---MKEEGDVEEAIASYRKAIEVKPD-------FADAYFALGLVMKEEGDVE 295

Query: 293 TALAVTNHG----PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGL 348
            A+A         P  + +Y+ L      +GD E+A   Y  +++   KP +F   Y+ L
Sbjct: 296 EAIASYRKAIEVKPDFADAYFALGLVMKEEGDVEEAIASYRKAIE--VKP-DFADAYFAL 352

Query: 349 GQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELL 399
           G V  + GD   A+ ++ K +E+ PD  +    LG++  + G+I++A++++
Sbjct: 353 GLVMKEEGDVEEAIASYRKAIEVKPDFADAYLNLGNVLKEEGEIDEARQII 403



 Score = 43.9 bits (102), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 75/366 (20%), Positives = 147/366 (40%), Gaps = 37/366 (10%)

Query: 263 IYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYE 322
           + P    AL+ L   +   GQH    +L + ++      P     ++NL +     G +E
Sbjct: 35  VNPKEPNALHLLGCIYKDRGQHQQAVELIQASIREDESNPI---PFFNLGKILAIAGQHE 91

Query: 323 KAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKAL 382
            A   +  ++K   +  E    ++       ++G    A   +   L++ P +      L
Sbjct: 92  NAVGVFQEALKRNQQIPE---TWFCFANALREIGKTEEAKQAYRNALQLNPAHAGAAGNL 148

Query: 383 GHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKK 441
           G +    G++++A++L  KA    P +    I+ G LL   ++  AA+  ++ A  L  +
Sbjct: 149 GALLTDDGELDEAEQLFVKAVDQYPNNVNLRINYGRLLAEKAEHAAAIMQYQIALPLAPQ 208

Query: 442 AGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL------GDGIWLTLLDSKTKTYVIDA 495
           + E     +  N      E+G+ E A  S++ A+       D  +   L  K +  V +A
Sbjct: 209 SPE-----LHYNFANALKEEGDVEEAIASYRKAIEVKPDFADAYFALGLVMKEEGDVEEA 263

Query: 496 SASMLQ-------FKD----MQLFHRFENDGNH--------VELPWNKVTVLFNLARLLE 536
            AS  +       F D    + L  + E D           +E+  +     F L  +++
Sbjct: 264 IASYRKAIEVKPDFADAYFALGLVMKEEGDVEEAIASYRKAIEVKPDFADAYFALGLVMK 323

Query: 537 QIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNAL 596
           +  D   A   YR  +    D+ DAY  L  + K   +++ +I    +A++V   + +A 
Sbjct: 324 EEGDVEEAIASYRKAIEVKPDFADAYFALGLVMKEEGDVEEAIASYRKAIEVKPDFADAY 383

Query: 597 SMLGDL 602
             LG++
Sbjct: 384 LNLGNV 389


>gi|449105250|ref|ZP_21741955.1| hypothetical protein HMPREF9729_00220 [Treponema denticola ASLM]
 gi|449124143|ref|ZP_21760462.1| hypothetical protein HMPREF9723_00506 [Treponema denticola OTK]
 gi|451969556|ref|ZP_21922785.1| hypothetical protein HMPREF9728_01987 [Treponema denticola US-Trep]
 gi|448942474|gb|EMB23368.1| hypothetical protein HMPREF9723_00506 [Treponema denticola OTK]
 gi|448967237|gb|EMB47878.1| hypothetical protein HMPREF9729_00220 [Treponema denticola ASLM]
 gi|451701653|gb|EMD56114.1| hypothetical protein HMPREF9728_01987 [Treponema denticola US-Trep]
          Length = 415

 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 90/346 (26%), Positives = 152/346 (43%), Gaps = 21/346 (6%)

Query: 138 LLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPG 197
           LL    + +A + FK +LE D  N  AL+G    E    +++++++FYK+ L+ HPS   
Sbjct: 70  LLKGNSITEAINVFKKILELDPTNNYALVGLGDAERKNNKFNEAIKFYKQCLEHHPSNNY 129

Query: 198 AIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKM 257
           A+  G+  C   + Q  +A   ++  L+ D +N+  L  +A    +  E     K  +  
Sbjct: 130 AL-FGLADCYKSMNQFPRAIAIWEEYLKFDDKNITVLTRVADAYRKTKE---FEKAEKLY 185

Query: 258 QRAFEIYPYCAMALNYLA--NHFFFTGQHFLV--EQLTETALAVTNHGPTKSHSYYNLAR 313
           Q+  E  P  A AL  L   N+ F   +  LV  E++ E++  + +     S     +  
Sbjct: 186 QKVLEKSPKNAYALIGLGHLNYDFKKYREALVYWEKVMESSGELVDIRILTS-----IGN 240

Query: 314 SYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYP 373
            Y     +++ G+YY     E   P  F +  +GL      L    +++  ++K+LE+ P
Sbjct: 241 CYRKMKLFDR-GVYYFERALE-RSPDNF-YGLFGLADCYRGLNQQYNSIVYWKKILELDP 297

Query: 374 DNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFK 433
           +N   L  +G  Y  +   EKA+E  +KA  ID  D+ A + L    I        D   
Sbjct: 298 NNKVILTRIGDAYRSMNDFEKAKESYQKALDID-FDSYAMLGLA---ILCKLQQKYDQAI 353

Query: 434 TARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGI 479
           T  T LK  G +    V   +   + EK E + A ++  D    GI
Sbjct: 354 TTLTHLKDTG-DTNYRVYLELAQCYIEKKEKQKAIETLIDFQKLGI 398


>gi|422341626|ref|ZP_16422567.1| TPR domain-containing protein [Treponema denticola F0402]
 gi|325474465|gb|EGC77652.1| TPR domain-containing protein [Treponema denticola F0402]
          Length = 415

 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 88/340 (25%), Positives = 150/340 (44%), Gaps = 21/340 (6%)

Query: 138 LLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPG 197
           LL    + +A + FK +LE D  N  AL+G    E    +++++++FYK+ L+ HPS   
Sbjct: 70  LLKGNSITEAINVFKKILELDPTNNYALVGLGDAERKNNKFNEAIKFYKQCLEHHPSNNY 129

Query: 198 AIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKM 257
           A+  G+  C   + Q  +A   ++  L+ D +N+  L  +A    +  E     K  +  
Sbjct: 130 AL-FGLADCYKSMNQFPRAIAIWEEYLKFDDKNITVLTRVADAYRKTKE---FEKAEKLY 185

Query: 258 QRAFEIYPYCAMALNYLA--NHFFFTGQHFLV--EQLTETALAVTNHGPTKSHSYYNLAR 313
           Q+  E  P  A AL  L   N+ F   +  LV  E++ E++  + +     S     +  
Sbjct: 186 QKVLEKSPKNAYALIGLGHLNYDFKKYREALVYWEKVMESSGELVDIRILTS-----IGN 240

Query: 314 SYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYP 373
            Y     +++ G+YY     E   P  F +  +GL      L    +++  ++K+LE+ P
Sbjct: 241 CYRKMKLFDR-GVYYFERALE-RSPDNF-YGLFGLADCYRGLNQQYNSIVYWKKILELDP 297

Query: 374 DNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFK 433
           +N   L  +G  Y  +   EKA+E  +KA  ID  D+ A + L    I        D   
Sbjct: 298 NNKVILTRIGDAYRSMNDFEKAKESYQKALDID-FDSYAMLGLA---ILCKLQQKYDQAI 353

Query: 434 TARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKD 473
           T  T LK  G +    V   +   + EK E + A ++  D
Sbjct: 354 TTLTHLKDTG-DTNYRVYLELAQCYIEKKEKQKAIETLID 392



 Score = 44.7 bits (104), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 61/130 (46%), Gaps = 2/130 (1%)

Query: 346 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKI 405
           +GL      +  F  A+  +E+ L+    N   L  +   Y +  + EKA++L +K  + 
Sbjct: 132 FGLADCYKSMNQFPRAIAIWEEYLKFDDKNITVLTRVADAYRKTKEFEKAEKLYQKVLEK 191

Query: 406 DPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFE 465
            P++A A I LG L  + D     +A      +++ +GE V I +L +IG  + +   F+
Sbjct: 192 SPKNAYALIGLGHL--NYDFKKYREALVYWEKVMESSGELVDIRILTSIGNCYRKMKLFD 249

Query: 466 SAHQSFKDAL 475
                F+ AL
Sbjct: 250 RGVYYFERAL 259


>gi|427421749|ref|ZP_18911932.1| TPR repeat-containing protein [Leptolyngbya sp. PCC 7375]
 gi|425757626|gb|EKU98480.1| TPR repeat-containing protein [Leptolyngbya sp. PCC 7375]
          Length = 1303

 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 86/357 (24%), Positives = 156/357 (43%), Gaps = 26/357 (7%)

Query: 117  YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 176
            Y+KA  ++ ++ + W  +G  L   G  E+A +++   +E + DN  A   +     N G
Sbjct: 759  YDKAVEVNPNDHNAWNNRGNSLTNLGRYEEAIASYDKAVEVNPDNHSAWYSRGNSLANLG 818

Query: 177  RYSDSLEFYKRALQVHPSCPGAI-RLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV 235
            RY +++  Y +A++V+P    A    GI L    LG   +A  ++ +A++L P++  +  
Sbjct: 819  RYQEAIASYDQAVEVNPDDHLAWYNRGISLA--SLGHYQEAIASYDKAVELKPDDHNS-- 874

Query: 236  ALAVMDLQANEAAGIRKGMEKM---QRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTE 292
                 + + N  A + +  E +    +A E+ P    A     N     G +       +
Sbjct: 875  ----WNNRGNSLANLGRYEEAIASYDQAVEVNPDNHSAWYNRGNSLASLGHYQEAIASYD 930

Query: 293  TALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQ 352
             A+ +    P    ++ N   S H+ G Y++A   Y  +V+   KP   +  +   G   
Sbjct: 931  KAVELK---PDNHLAWNNRGSSLHNLGRYQEAITSYNKAVEL--KPDNHL-AWNNRGSSL 984

Query: 353  LKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQA 412
              LG ++ A+T++ K +E+ PD  E     G     LG+ E+A     KA ++ P D  A
Sbjct: 985  HNLGRYQEAITSYNKAVELKPDKHEAWNNQGSSLANLGRYEEAIASYDKAVELKPDDHLA 1044

Query: 413  FIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIE--VLNNIGVIHFEKGEFESA 467
            + + G  L +      L  ++ A     KA +  P +   L N G IH   G+ + A
Sbjct: 1045 WNNRGNSLKN------LGRYEEAIASYDKAVDIKPDDHKALANRGDIHRRLGQHQQA 1095



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 80/332 (24%), Positives = 140/332 (42%), Gaps = 19/332 (5%)

Query: 109  HFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQ 168
            H+  A   Y+KA  +   + ++W  +G  L   G  E+A +++   +E + DN  A   +
Sbjct: 853  HYQEAIASYDKAVELKPDDHNSWNNRGNSLANLGRYEEAIASYDQAVEVNPDNHSAWYNR 912

Query: 169  ACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDP 228
                 + G Y +++  Y +A+++ P    A     G   + LG+  +A  ++ +A++L P
Sbjct: 913  GNSLASLGHYQEAIASYDKAVELKPDNHLAWN-NRGSSLHNLGRYQEAITSYNKAVELKP 971

Query: 229  ENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVE 288
            +N    +A        +     ++ +    +A E+ P    A N   +     G++    
Sbjct: 972  DN---HLAWNNRGSSLHNLGRYQEAITSYNKAVELKPDKHEAWNNQGSSLANLGRY---- 1024

Query: 289  QLTETALAVTNHG----PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFP 344
               E A+A  +      P    ++ N   S  + G YE+A   Y  +V      H+ +  
Sbjct: 1025 ---EEAIASYDKAVELKPDDHLAWNNRGNSLKNLGRYEEAIASYDKAVDIKPDDHKALA- 1080

Query: 345  YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAK 404
                G +  +LG  + AL +    +++ PD    +   G  Y QL Q E A E L +  +
Sbjct: 1081 --NRGDIHRRLGQHQQALADLNHAIDLKPDYAWAIATRGQTYAQLQQYETALEDLDRTIE 1138

Query: 405  IDPRDAQAFIDLGEL-LISSDTGAALDAFKTA 435
            IDP D  A    GEL L      AAL AF  A
Sbjct: 1139 IDPDDTWAIGYRGELYLWLHRYQAALTAFNHA 1170



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 92/395 (23%), Positives = 175/395 (44%), Gaps = 32/395 (8%)

Query: 87   NALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQ 146
            +ALG Y      ++  Q  ++E  I +   Y+ A  I+ ++ ++W  +G  L+  G  E+
Sbjct: 701  DALGWYNK---GVQLGQLGRDEEAIAS---YDNAVNINPNDHNSWNNRGNSLVNLGRYEE 754

Query: 147  ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 206
            A +++   +E + ++  A   +     N GRY +++  Y +A++V+P    A     G  
Sbjct: 755  AIASYDKAVEVNPNDHNAWNNRGNSLTNLGRYEEAIASYDKAVEVNPDNHSAW-YSRGNS 813

Query: 207  RYKLGQLGKARQAFQRALQLDPENVEAL----VALAVMDLQANEAAGIRKGMEKMQRAFE 262
               LG+  +A  ++ +A++++P++  A     ++LA +          ++ +    +A E
Sbjct: 814  LANLGRYQEAIASYDQAVEVNPDDHLAWYNRGISLASL-------GHYQEAIASYDKAVE 866

Query: 263  IYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYE 322
            + P    + N   N     G++       + A+ V    P    ++YN   S  S G Y+
Sbjct: 867  LKPDDHNSWNNRGNSLANLGRYEEAIASYDQAVEV---NPDNHSAWYNRGNSLASLGHYQ 923

Query: 323  KAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKAL 382
            +A   Y  +V+   KP   +  +   G     LG ++ A+T++ K +E+ PDN       
Sbjct: 924  EAIASYDKAVEL--KPDNHL-AWNNRGSSLHNLGRYQEAITSYNKAVELKPDNHLAWNNR 980

Query: 383  GHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKA 442
            G     LG+ ++A     KA ++ P   +A+ + G  L      A L  ++ A     KA
Sbjct: 981  GSSLHNLGRYQEAITSYNKAVELKPDKHEAWNNQGSSL------ANLGRYEEAIASYDKA 1034

Query: 443  GEEVPIEVL--NNIGVIHFEKGEFESAHQSFKDAL 475
             E  P + L  NN G      G +E A  S+  A+
Sbjct: 1035 VELKPDDHLAWNNRGNSLKNLGRYEEAIASYDKAV 1069



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 85/370 (22%), Positives = 159/370 (42%), Gaps = 36/370 (9%)

Query: 117  YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 176
            +NKA  I   +   W  KG  L   G  E+A +++   +  + ++  +   +     N G
Sbjct: 691  HNKALEIKPDDALGWYNKGVQLGQLGRDEEAIASYDNAVNINPNDHNSWNNRGNSLVNLG 750

Query: 177  RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVA 236
            RY +++  Y +A++V+P+   A     G     LG+  +A  ++ +A++++P+N  A  +
Sbjct: 751  RYEEAIASYDKAVEVNPNDHNAWN-NRGNSLTNLGRYEEAIASYDKAVEVNPDNHSAWYS 809

Query: 237  LAVMDLQANEAAGIRKGMEKM---QRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTET 293
                  + N  A + +  E +    +A E+ P          +H  +  +   +  L   
Sbjct: 810  ------RGNSLANLGRYQEAIASYDQAVEVNP---------DDHLAWYNRGISLASLGHY 854

Query: 294  ALAVTNHG------PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYG 347
              A+ ++       P   +S+ N   S  + G YE+A   Y  +V E+N  +     +Y 
Sbjct: 855  QEAIASYDKAVELKPDDHNSWNNRGNSLANLGRYEEAIASYDQAV-EVNPDNHSA--WYN 911

Query: 348  LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 407
             G     LG ++ A+ +++K +E+ PDN       G     LG+ ++A     KA ++ P
Sbjct: 912  RGNSLASLGHYQEAIASYDKAVELKPDNHLAWNNRGSSLHNLGRYQEAITSYNKAVELKP 971

Query: 408  RDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPI--EVLNNIGVIHFEKGEFE 465
             +  A+ + G  L +      L  ++ A T   KA E  P   E  NN G      G +E
Sbjct: 972  DNHLAWNNRGSSLHN------LGRYQEAITSYNKAVELKPDKHEAWNNQGSSLANLGRYE 1025

Query: 466  SAHQSFKDAL 475
             A  S+  A+
Sbjct: 1026 EAIASYDKAV 1035



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 73/335 (21%), Positives = 140/335 (41%), Gaps = 46/335 (13%)

Query: 174 NRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENV-- 231
           N G Y +++  Y +AL ++P    A  +G G    KL +  +A  +  +AL++ P++   
Sbjct: 646 NLGHYVEAIASYDKALNINPDDHNAW-IGKGTALEKLRKYKEALISHNKALEIKPDDALG 704

Query: 232 ---------------EALVAL-AVMDLQANEAAGIR-------------KGMEKMQRAFE 262
                          EA+ +    +++  N+                  + +    +A E
Sbjct: 705 WYNKGVQLGQLGRDEEAIASYDNAVNINPNDHNSWNNRGNSLVNLGRYEEAIASYDKAVE 764

Query: 263 IYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYE 322
           + P    A N   N     G++       + A+ V    P    ++Y+   S  + G Y+
Sbjct: 765 VNPNDHNAWNNRGNSLTNLGRYEEAIASYDKAVEV---NPDNHSAWYSRGNSLANLGRYQ 821

Query: 323 KAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKAL 382
           +A   Y  +V E+N P + +  +Y  G     LG ++ A+ +++K +E+ PD+  +    
Sbjct: 822 EAIASYDQAV-EVN-PDDHL-AWYNRGISLASLGHYQEAIASYDKAVELKPDDHNSWNNR 878

Query: 383 GHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKA 442
           G+    LG+ E+A     +A +++P +  A+ + G  L      A+L  ++ A     KA
Sbjct: 879 GNSLANLGRYEEAIASYDQAVEVNPDNHSAWYNRGNSL------ASLGHYQEAIASYDKA 932

Query: 443 GEEVPIEVL--NNIGVIHFEKGEFESAHQSFKDAL 475
            E  P   L  NN G      G ++ A  S+  A+
Sbjct: 933 VELKPDNHLAWNNRGSSLHNLGRYQEAITSYNKAV 967


>gi|345302037|ref|YP_004823939.1| hypothetical protein Rhom172_0153 [Rhodothermus marinus
           SG0.5JP17-172]
 gi|345111270|gb|AEN72102.1| Tetratricopeptide TPR_2 repeat-containing protein [Rhodothermus
           marinus SG0.5JP17-172]
          Length = 465

 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 78/342 (22%), Positives = 142/342 (41%), Gaps = 39/342 (11%)

Query: 129 STWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRA 188
             W+ +G LL   G  E+A  A++  L  +  +   L+       N GR+ ++L+ Y+RA
Sbjct: 73  DAWMRRGILLSHLGRHEEALQAYERALSLNPTDTETLVNLGITLDNLGRFEEALQTYERA 132

Query: 189 LQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAA 248
           LQ+ P     I   +G+   ++ +L +A QA + A +L+P++ E    L       +   
Sbjct: 133 LQIDP-LNDEIYYNLGITLERMDRLEEAVQALEEAARLNPDHPEVWYELGFC---YDRLG 188

Query: 249 GIRKGMEKMQRAFEIYPYCA-------MALNYLAN--------HFFFTGQHFLVEQLTET 293
              + +    R  E+ PY A       + LN +           +    Q          
Sbjct: 189 DDERSLACYDRHLELDPYSADAWYNRGIVLNRMGRFREAVESYDYALAIQEDFGSAWYNR 248

Query: 294 ALAVTNHGPTKS----------------HSYYNLARSYHSKGDYEKAGLYYMASVKEINK 337
             A+TN G  +                  +YYN+A +Y    +YE A  Y+  +++E   
Sbjct: 249 GNALTNLGDLRGAIESYEKVLEIEGGDPATYYNIALAYEELQEYETAIQYFQLALEEDPA 308

Query: 338 PHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQE 397
             E    +YGLG     L  F  A+   E+ + + P+  E   A         +++ A +
Sbjct: 309 YAE---AWYGLGCCYDALERFEEAIACMERAVTLQPETSEFWYAKADCEYNARRLQDALQ 365

Query: 398 LLRKAAKIDPRDAQAFIDLGELLISSD-TGAALDAFKTARTL 438
             R+  ++DP++  A++D  E L+ +     +L A++ A TL
Sbjct: 366 SYRRVIELDPQNRDAWLDYAETLLEAGYVEESLQAYRQALTL 407



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 87/366 (23%), Positives = 153/366 (41%), Gaps = 61/366 (16%)

Query: 173 FNRGRYSDSLEFYKRALQVHPSCPGA-IRLGIGLCRYKLGQLGKARQAFQRALQLDPENV 231
           + RGR+ D+L    R L +HP+   A +R GI L    LG+  +A QA++RAL L+P + 
Sbjct: 49  YERGRFEDALGAIDRLLALHPTASDAWMRRGILLS--HLGRHEEALQAYERALSLNPTDT 106

Query: 232 EALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFL--VEQ 289
           E LV L +     +      + ++  +RA +I P        L +  ++     L  +++
Sbjct: 107 ETLVNLGIT---LDNLGRFEEALQTYERALQIDP--------LNDEIYYNLGITLERMDR 155

Query: 290 LTETALAVTNHG---PTKSHSYYNLARSYHSKGDYEKAGLYY------------------ 328
           L E   A+       P     +Y L   Y   GD E++   Y                  
Sbjct: 156 LEEAVQALEEAARLNPDHPEVWYELGFCYDRLGDDERSLACYDRHLELDPYSADAWYNRG 215

Query: 329 -----MASVKEINKPHEFIFP--------YYGLGQVQLKLGDFRSALTNFEKVLEIYPDN 375
                M   +E  + +++           +Y  G     LGD R A+ ++EKVLEI   +
Sbjct: 216 IVLNRMGRFREAVESYDYALAIQEDFGSAWYNRGNALTNLGDLRGAIESYEKVLEIEGGD 275

Query: 376 CETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTA 435
             T   +   Y +L + E A +  + A + DP  A+A+  LG      D   AL+ F+ A
Sbjct: 276 PATYYNIALAYEELQEYETAIQYFQLALEEDPAYAEAWYGLG---CCYD---ALERFEEA 329

Query: 436 RTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDA 495
              +++A     + +        + K + E   +  +DAL     +  LD + +   +D 
Sbjct: 330 IACMERA-----VTLQPETSEFWYAKADCEYNARRLQDALQSYRRVIELDPQNRDAWLDY 384

Query: 496 SASMLQ 501
           + ++L+
Sbjct: 385 AETLLE 390



 Score = 49.3 bits (116), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 49/196 (25%), Positives = 82/196 (41%), Gaps = 22/196 (11%)

Query: 70  EIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPS 129
           E+D Y AD  Y R  +LN +G                   F  A + Y+ A  I     S
Sbjct: 202 ELDPYSADAWYNRGIVLNRMG------------------RFREAVESYDYALAIQEDFGS 243

Query: 130 TWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRAL 189
            W  +G  L   G++  A  +++ VLE +  +       A        Y  ++++++ AL
Sbjct: 244 AWYNRGNALTNLGDLRGAIESYEKVLEIEGGDPATYYNIALAYEELQEYETAIQYFQLAL 303

Query: 190 QVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAG 249
           +  P+   A   G+G C   L +  +A    +RA+ L PE  E   A A  D + N A  
Sbjct: 304 EEDPAYAEAW-YGLGCCYDALERFEEAIACMERAVTLQPETSEFWYAKA--DCEYN-ARR 359

Query: 250 IRKGMEKMQRAFEIYP 265
           ++  ++  +R  E+ P
Sbjct: 360 LQDALQSYRRVIELDP 375


>gi|166368546|ref|YP_001660819.1| hypothetical protein MAE_58050 [Microcystis aeruginosa NIES-843]
 gi|166090919|dbj|BAG05627.1| tetratricopeptide TPR_2 [Microcystis aeruginosa NIES-843]
          Length = 741

 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 92/370 (24%), Positives = 149/370 (40%), Gaps = 22/370 (5%)

Query: 110 FILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQA 169
           F  A   Y++A  I   +P  W  +G  L   G  EQA +++   LE   D   A   + 
Sbjct: 86  FEQAIASYDRALEIKPDDPDAWNNRGNALYNLGRFEQAIASYDRALEIKPDYHEAWYNRG 145

Query: 170 CVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPE 229
               N GR+  ++  Y RAL+  P  P A     G+    LG+  +A  ++ +AL+  P+
Sbjct: 146 VALGNLGRFEQAIASYDRALEFKPDDPDAW-YNRGVALGNLGRFEQAIASYDKALEFKPD 204

Query: 230 NVEALV--ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLV 287
             EA     +A+ +L       + + +    RA E  P    A NY        G+    
Sbjct: 205 YHEAWYNRGIALGNL-----GRLEEAIASWDRALEFKPDDHDAWNYRGIALANLGR---F 256

Query: 288 EQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYG 347
           E+   +        P    ++     +  + G +E+A   +  +++     H+  + Y G
Sbjct: 257 EEAIASWDRALEFKPDDHDAWNYRGIALANLGRFEEAIASWDRALEFKPDDHD-AWNYRG 315

Query: 348 LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 407
           +      LG F  A+ +++K LE  PD  E     G     LG++E+A     +A +I P
Sbjct: 316 IALGN--LGRFEEAIASYDKALEFKPDYHEAWYNRGIALKNLGRLEEAIASWDRALEIKP 373

Query: 408 RDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPI--EVLNNIGVIHFEKGEFE 465
              +A+ + G  L        L  F+ A     +A E  P   E   N GV     G FE
Sbjct: 374 DKHEAWYNRGVAL------GNLGRFEEAIASYDRALEIKPDKHEAWYNRGVALGNLGRFE 427

Query: 466 SAHQSFKDAL 475
            A  S+  AL
Sbjct: 428 EAIASYDRAL 437



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 79/315 (25%), Positives = 132/315 (41%), Gaps = 18/315 (5%)

Query: 110 FILATQYYNKA--SRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLG 167
           F  A   Y+KA   + D HE   W  +G  L   G +E+A +++   LE   D   A   
Sbjct: 324 FEEAIASYDKALEFKPDYHE--AWYNRGIALKNLGRLEEAIASWDRALEIKPDKHEAWYN 381

Query: 168 QACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLD 227
           +     N GR+ +++  Y RAL++ P    A     G+    LG+  +A  ++ RAL++ 
Sbjct: 382 RGVALGNLGRFEEAIASYDRALEIKPDKHEAW-YNRGVALGNLGRFEEAIASYDRALEIK 440

Query: 228 PENVEALV--ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 285
           P+  EA     +A+ +L   E A     +    RA EI P    A     N     G   
Sbjct: 441 PDKHEAWYNRGVALGNLGRFEEA-----IASYDRALEIKPDKHEAW---YNRGVALGNLG 492

Query: 286 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 345
            +E+   +        P    ++YN   +  + G +E+A   Y  +++     HE    +
Sbjct: 493 RLEEAIASYDRALEFKPDDPDAWYNRGVALGNLGRFEEAIASYDRALEIKPDKHE---AW 549

Query: 346 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKI 405
           Y  G     LG    A+ ++++ LE  PD+ +     G     LG+ E+A     +A + 
Sbjct: 550 YNRGVALYNLGRLEEAIASYDRALEFKPDDPDAWNNRGVALGNLGRFEQAIASYDRALEF 609

Query: 406 DPRDAQAFIDLGELL 420
            P D  A+ + G  L
Sbjct: 610 KPDDPDAWYNRGNAL 624



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 93/368 (25%), Positives = 149/368 (40%), Gaps = 24/368 (6%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
           A   +++A      +   W  +G  L   G  E+A +++   LE   D+  A   +    
Sbjct: 225 AIASWDRALEFKPDDHDAWNYRGIALANLGRFEEAIASWDRALEFKPDDHDAWNYRGIAL 284

Query: 173 FNRGRYSDSLEFYKRALQVHPSCPGAIRL-GIGLCRYKLGQLGKARQAFQRALQLDPENV 231
            N GR+ +++  + RAL+  P    A    GI L    LG+  +A  ++ +AL+  P+  
Sbjct: 285 ANLGRFEEAIASWDRALEFKPDDHDAWNYRGIALG--NLGRFEEAIASYDKALEFKPDYH 342

Query: 232 EALV--ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQ 289
           EA     +A+ +L   E A     +    RA EI P    A     N     G     E+
Sbjct: 343 EAWYNRGIALKNLGRLEEA-----IASWDRALEIKPDKHEAW---YNRGVALGNLGRFEE 394

Query: 290 LTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLG 349
              +        P K  ++YN   +  + G +E+A   Y  +++     HE    +Y  G
Sbjct: 395 AIASYDRALEIKPDKHEAWYNRGVALGNLGRFEEAIASYDRALEIKPDKHE---AWYNRG 451

Query: 350 QVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRD 409
                LG F  A+ ++++ LEI PD  E     G     LG++E+A     +A +  P D
Sbjct: 452 VALGNLGRFEEAIASYDRALEIKPDKHEAWYNRGVALGNLGRLEEAIASYDRALEFKPDD 511

Query: 410 AQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPI--EVLNNIGVIHFEKGEFESA 467
             A+ + G  L        L  F+ A     +A E  P   E   N GV  +  G  E A
Sbjct: 512 PDAWYNRGVAL------GNLGRFEEAIASYDRALEIKPDKHEAWYNRGVALYNLGRLEEA 565

Query: 468 HQSFKDAL 475
             S+  AL
Sbjct: 566 IASYDRAL 573



 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 71/309 (22%), Positives = 127/309 (41%), Gaps = 12/309 (3%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
           A   +++A  I   +   W  +G  L   G  E+A +++   LE   D   A   +    
Sbjct: 361 AIASWDRALEIKPDKHEAWYNRGVALGNLGRFEEAIASYDRALEIKPDKHEAWYNRGVAL 420

Query: 173 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 232
            N GR+ +++  Y RAL++ P    A     G+    LG+  +A  ++ RAL++ P+  E
Sbjct: 421 GNLGRFEEAIASYDRALEIKPDKHEAW-YNRGVALGNLGRFEEAIASYDRALEIKPDKHE 479

Query: 233 ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTE 292
           A     V          + + +    RA E  P    A     N     G     E+   
Sbjct: 480 AWYNRGVA---LGNLGRLEEAIASYDRALEFKPDDPDAW---YNRGVALGNLGRFEEAIA 533

Query: 293 TALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK-EINKPHEFIFPYYGLGQV 351
           +        P K  ++YN   + ++ G  E+A   Y  +++ + + P  +      LG  
Sbjct: 534 SYDRALEIKPDKHEAWYNRGVALYNLGRLEEAIASYDRALEFKPDDPDAWNNRGVALGN- 592

Query: 352 QLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQ 411
              LG F  A+ ++++ LE  PD+ +     G+    LG++E+A     +A +  P   Q
Sbjct: 593 ---LGRFEQAIASYDRALEFKPDDPDAWYNRGNALDDLGRLEEAIASYDRALEFKPDYHQ 649

Query: 412 AFIDLGELL 420
           A+ + G  L
Sbjct: 650 AWYNRGNAL 658



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 73/306 (23%), Positives = 130/306 (42%), Gaps = 14/306 (4%)

Query: 110 FILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQA 169
           F  A   Y++A  I   +   W  +G  L   G  E+A +++   LE   D   A   + 
Sbjct: 392 FEEAIASYDRALEIKPDKHEAWYNRGVALGNLGRFEEAIASYDRALEIKPDKHEAWYNRG 451

Query: 170 CVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPE 229
               N GR+ +++  Y RAL++ P    A     G+    LG+L +A  ++ RAL+  P+
Sbjct: 452 VALGNLGRFEEAIASYDRALEIKPDKHEAW-YNRGVALGNLGRLEEAIASYDRALEFKPD 510

Query: 230 NVEALV--ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLV 287
           + +A     +A+ +L   E A     +    RA EI P    A        +  G+   +
Sbjct: 511 DPDAWYNRGVALGNLGRFEEA-----IASYDRALEIKPDKHEAWYNRGVALYNLGR---L 562

Query: 288 EQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYG 347
           E+   +        P    ++ N   +  + G +E+A   Y  +++   KP +    +Y 
Sbjct: 563 EEAIASYDRALEFKPDDPDAWNNRGVALGNLGRFEQAIASYDRALE--FKPDD-PDAWYN 619

Query: 348 LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 407
            G     LG    A+ ++++ LE  PD  +     G+    LG++E+A     +A KI+ 
Sbjct: 620 RGNALDDLGRLEEAIASYDRALEFKPDYHQAWYNRGNALDDLGRLEEAIASYDQAIKINS 679

Query: 408 RDAQAF 413
             A A+
Sbjct: 680 NSANAY 685



 Score = 63.2 bits (152), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 76/310 (24%), Positives = 128/310 (41%), Gaps = 14/310 (4%)

Query: 110 FILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQA 169
           F  A   +++A      +   W  +G  L   G  E+A +++   LE   D   A   + 
Sbjct: 290 FEEAIASWDRALEFKPDDHDAWNYRGIALGNLGRFEEAIASYDKALEFKPDYHEAWYNRG 349

Query: 170 CVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPE 229
               N GR  +++  + RAL++ P    A     G+    LG+  +A  ++ RAL++ P+
Sbjct: 350 IALKNLGRLEEAIASWDRALEIKPDKHEAW-YNRGVALGNLGRFEEAIASYDRALEIKPD 408

Query: 230 NVEALV--ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLV 287
             EA     +A+ +L   E A     +    RA EI P    A     N     G     
Sbjct: 409 KHEAWYNRGVALGNLGRFEEA-----IASYDRALEIKPDKHEAW---YNRGVALGNLGRF 460

Query: 288 EQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYG 347
           E+   +        P K  ++YN   +  + G  E+A   Y  +++   KP +    +Y 
Sbjct: 461 EEAIASYDRALEIKPDKHEAWYNRGVALGNLGRLEEAIASYDRALE--FKPDD-PDAWYN 517

Query: 348 LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 407
            G     LG F  A+ ++++ LEI PD  E     G     LG++E+A     +A +  P
Sbjct: 518 RGVALGNLGRFEEAIASYDRALEIKPDKHEAWYNRGVALYNLGRLEEAIASYDRALEFKP 577

Query: 408 RDAQAFIDLG 417
            D  A+ + G
Sbjct: 578 DDPDAWNNRG 587



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 82/318 (25%), Positives = 130/318 (40%), Gaps = 22/318 (6%)

Query: 162 VPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQ 221
           +P+L G     +   RY D+L+ + R + + P          G     L Q  +A  ++ 
Sbjct: 2   LPSLAGFTLKLYELKRYQDALKGFNRLVSLLPQWEDGW-FYQGTTFDYLEQYQEAIASYD 60

Query: 222 RALQLDPENVEALV--ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFF 279
           RAL++ P+  EA     +A+ +L   E A     +    RA EI P    A N   N  +
Sbjct: 61  RALEIKPDYHEAWYNRGVALGNLGRFEQA-----IASYDRALEIKPDDPDAWNNRGNALY 115

Query: 280 FTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPH 339
             G+        + AL +    P    ++YN   +  + G +E+A   Y  +++   KP 
Sbjct: 116 NLGRFEQAIASYDRALEIK---PDYHEAWYNRGVALGNLGRFEQAIASYDRALE--FKPD 170

Query: 340 EFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELL 399
           +    +Y  G     LG F  A+ +++K LE  PD  E     G     LG++E+A    
Sbjct: 171 D-PDAWYNRGVALGNLGRFEQAIASYDKALEFKPDYHEAWYNRGIALGNLGRLEEAIASW 229

Query: 400 RKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPI--EVLNNIGVI 457
            +A +  P D  A+   G  L      A L  F+ A     +A E  P   +  N  G+ 
Sbjct: 230 DRALEFKPDDHDAWNYRGIAL------ANLGRFEEAIASWDRALEFKPDDHDAWNYRGIA 283

Query: 458 HFEKGEFESAHQSFKDAL 475
               G FE A  S+  AL
Sbjct: 284 LANLGRFEEAIASWDRAL 301



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 38/144 (26%), Positives = 63/144 (43%), Gaps = 12/144 (8%)

Query: 90  GVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASS 149
           GV    LG++E            A   Y++A      +P  W  +G  L   G  E+A +
Sbjct: 485 GVALGNLGRLEE-----------AIASYDRALEFKPDDPDAWYNRGVALGNLGRFEEAIA 533

Query: 150 AFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYK 209
           ++   LE   D   A   +    +N GR  +++  Y RAL+  P  P A     G+    
Sbjct: 534 SYDRALEIKPDKHEAWYNRGVALYNLGRLEEAIASYDRALEFKPDDPDAWN-NRGVALGN 592

Query: 210 LGQLGKARQAFQRALQLDPENVEA 233
           LG+  +A  ++ RAL+  P++ +A
Sbjct: 593 LGRFEQAIASYDRALEFKPDDPDA 616


>gi|42527576|ref|NP_972674.1| TPR [Treponema denticola ATCC 35405]
 gi|449111419|ref|ZP_21748016.1| hypothetical protein HMPREF9735_01065 [Treponema denticola ATCC
           33521]
 gi|449113766|ref|ZP_21750249.1| hypothetical protein HMPREF9721_00767 [Treponema denticola ATCC
           35404]
 gi|41818161|gb|AAS12585.1| TPR domain protein [Treponema denticola ATCC 35405]
 gi|448957849|gb|EMB38588.1| hypothetical protein HMPREF9721_00767 [Treponema denticola ATCC
           35404]
 gi|448958446|gb|EMB39177.1| hypothetical protein HMPREF9735_01065 [Treponema denticola ATCC
           33521]
          Length = 417

 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 72/273 (26%), Positives = 126/273 (46%), Gaps = 16/273 (5%)

Query: 138 LLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPG 197
           LL    + +A + FK +LE D  N  AL+G    E    +++++++FYK+ L+ HPS   
Sbjct: 70  LLKGNSITEAINVFKKILELDPTNNYALVGLGDAERKNNKFNEAIKFYKQCLEHHPSNNY 129

Query: 198 AIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKM 257
           A+  G+  C   + Q  +A   ++  L+ D +N+  L  +A    +  E     K  +  
Sbjct: 130 AL-FGLADCYKSMNQFPRAIAIWEEYLKFDDKNITVLTRVADAYRKTKE---FEKAEKLY 185

Query: 258 QRAFEIYPYCAMALNYLA--NHFFFTGQHFLV--EQLTETALAVTNHGPTKSHSYYNLAR 313
           Q+  E  P  A AL  L   N+ F   +  LV  E++ E++  + +     S     +  
Sbjct: 186 QKVLEKSPKNAYALIGLGHLNYDFKKYREALVYWEKVMESSGELVDIRILTS-----IGN 240

Query: 314 SYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYP 373
            Y     +++ G+YY     E   P  F +  +GL      L    +++  ++K+LE+ P
Sbjct: 241 CYRKMKLFDR-GVYYFERALE-RSPDNF-YGLFGLADCYRGLNQQYNSIVYWKKILELDP 297

Query: 374 DNCETLKALGHIYVQLGQIEKAQELLRKAAKID 406
           +N   L  +G  Y  +   EKA+E  +KA  ID
Sbjct: 298 NNKVILTRIGDAYRSMNDFEKAKESYQKALDID 330



 Score = 44.7 bits (104), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 61/130 (46%), Gaps = 2/130 (1%)

Query: 346 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKI 405
           +GL      +  F  A+  +E+ L+    N   L  +   Y +  + EKA++L +K  + 
Sbjct: 132 FGLADCYKSMNQFPRAIAIWEEYLKFDDKNITVLTRVADAYRKTKEFEKAEKLYQKVLEK 191

Query: 406 DPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFE 465
            P++A A I LG L  + D     +A      +++ +GE V I +L +IG  + +   F+
Sbjct: 192 SPKNAYALIGLGHL--NYDFKKYREALVYWEKVMESSGELVDIRILTSIGNCYRKMKLFD 249

Query: 466 SAHQSFKDAL 475
                F+ AL
Sbjct: 250 RGVYYFERAL 259


>gi|410912744|ref|XP_003969849.1| PREDICTED: Bardet-Biedl syndrome 4 protein-like [Takifugu rubripes]
          Length = 532

 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 66/227 (29%), Positives = 107/227 (47%), Gaps = 20/227 (8%)

Query: 256 KMQRAFEIYPYCAM-------ALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSY 308
           K+Q + E++  CA+        L  +A   F  G+H    +    A  VT+     SH  
Sbjct: 80  KIQESLELFQSCAILNPSSSDNLKQVARSLFLLGKHKAAIEFYHEAARVTDKDWEISH-- 137

Query: 309 YNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKV 368
            NL   Y    D + A   ++    +INK H+  F    LG+V L  GD   A+  +++ 
Sbjct: 138 -NLGLCYFFIKDLKNAE-EHLNRALQINK-HDKTF--MMLGKVHLLAGDTDKAIDVYKRA 192

Query: 369 LEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL-ISSDTGA 427
           +E  P+N E L  LG +Y+QLG+ +KA E L  A   DP + +A +  G ++    D   
Sbjct: 193 VEFSPENTEVLTTLGLLYLQLGKYQKAFEHLGNALTFDPSNYKAILAAGSMMQTHGDFDV 252

Query: 428 ALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDA 474
           A++ ++ A  ++    E  P+   NNIG+  F K ++ +A    K A
Sbjct: 253 AMNKYRVAACVVP---ESPPL--WNNIGMCFFGKKKYVAAFSCLKRA 294



 Score = 47.8 bits (112), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 68/294 (23%), Positives = 120/294 (40%), Gaps = 39/294 (13%)

Query: 580 ELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWN 638
           E +N AL++N K+     MLG + L   D  KA + + RA   + +  +   TL L    
Sbjct: 154 EHLNRALQIN-KHDKTFMMLGKVHLLAGDTDKAIDVYKRAVEFSPENTEVLTTLGLL--- 209

Query: 639 YFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLF 698
                        L+    +KA E     +    SN  A   AG ++   G FDV+ + +
Sbjct: 210 ------------YLQLGKYQKAFEHLGNALTFDPSNYKAILAAGSMMQTHGDFDVAMNKY 257

Query: 699 TQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNT--DAQILLYL 756
                  +  V  + P +W N+   +F +  +  A     +CL++ +Y +  D ++L  L
Sbjct: 258 R-----VAACVVPESPPLWNNIGMCFFGKKKYVAAF----SCLKRAHYLSPFDWKVLYNL 308

Query: 757 ARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKF----SASTLQKTRRTADEV 812
              H   +Q+      L  AI+L P    L     VA+       +A+   +   T D+ 
Sbjct: 309 GLVHLTMQQYASAFHFLSAAINLNPRMGELYMLLAVALTNLEDVENATKAYEQAVTMDDS 368

Query: 813 RSTVAELENAVRVFSHLSAASNLHLHGFDEKKI------NTHVEYCKHLLDAAK 860
              V  L  A+ +++H      L  +   E+K+      N++ E+   L+D A+
Sbjct: 369 NPLV-NLNFAIFLYNHGEKEEALAQYQEMERKVNLLRDSNSNFEFDAELIDMAQ 421


>gi|392410767|ref|YP_006447374.1| Tfp pilus assembly protein PilF [Desulfomonile tiedjei DSM 6799]
 gi|390623903|gb|AFM25110.1| Tfp pilus assembly protein PilF [Desulfomonile tiedjei DSM 6799]
          Length = 481

 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 75/332 (22%), Positives = 142/332 (42%), Gaps = 32/332 (9%)

Query: 80  YERIAILNALGVYYTY-LGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLL 138
           Y R  + +   +   Y    ++++Q + +E    A +  N+  RID  +    V  G++ 
Sbjct: 113 YSRALVCDPQNITALYNRASLKSRQNQNKE----ALEDINQVLRIDPRQKKARVLLGKIH 168

Query: 139 LAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGA 198
           +  G  ++A   F+ VL  D + V AL G     F   R+S+++ +Y  AL+  P+    
Sbjct: 169 IVSGLPDKALKEFQTVLTGDPEQVEALAGSGDAHFLSSRFSEAVTYYSEALKRQPTP--- 225

Query: 199 IRLGIGLCR--YKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEK 256
             L +  C    KL    KA +    +++LDP N E    L              + + +
Sbjct: 226 -LLYMNRCSALLKLNDPDKALEDCTESVRLDPNNPEGFYNLG----------NCMQALNR 274

Query: 257 MQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALA------VTNHGPTKSHSYYN 310
              A E +   A+ +N     +F+  +   + +L E+  A      V +  P  + +  N
Sbjct: 275 HTEAVEAFSK-AIEINEQTPRYFY-NRGVSLSKLGESEKAGRDFDQVLHMNPKHAEALTN 332

Query: 311 LARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLE 370
               Y   GD + A   +  +++  +K    +  Y  L  V LK      ++   E+ L+
Sbjct: 333 RGVIYWMSGDTQSATQDFTKAIEHDSK---HVLAYVNLASVYLKDNQVDESIAVLERALK 389

Query: 371 IYPDNCETLKALGHIYVQLGQIEKAQELLRKA 402
           + P + E L +LGH +++ G+++KA    +KA
Sbjct: 390 VAPKDREVLLSLGHAWMEKGKLDKALSFYKKA 421



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 66/279 (23%), Positives = 114/279 (40%), Gaps = 25/279 (8%)

Query: 345 YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAK 404
           Y   G V  + GDF  AL ++ + L   P N   L     +  +  Q ++A E + +  +
Sbjct: 93  YTNRGMVYQEQGDFSQALLDYSRALVCDPQNITALYNRASLKSRQNQNKEALEDINQVLR 152

Query: 405 IDPRDAQAFIDLGEL-LISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGE 463
           IDPR  +A + LG++ ++S     AL  F+T  T     G+   +E L   G  HF    
Sbjct: 153 IDPRQKKARVLLGKIHIVSGLPDKALKEFQTVLT-----GDPEQVEALAGSGDAHFLSSR 207

Query: 464 FESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWN 523
           F  A   + +AL            T    ++  +++L+  D       E+    V L  N
Sbjct: 208 FSEAVTYYSEALK--------RQPTPLLYMNRCSALLKLNDPD--KALEDCTESVRLDPN 257

Query: 524 KVTVLFNLARLLEQIH-DTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELV 582
                +NL   ++ ++  T A     + I    Q     Y R  +++K   + +   +  
Sbjct: 258 NPEGFYNLGNCMQALNRHTEAVEAFSKAIEINEQTPRYFYNRGVSLSKLGESEKAGRDF- 316

Query: 583 NEALKVNGKYPNALS-------MLGDLELKNDDWVKAKE 614
           ++ L +N K+  AL+       M GD +    D+ KA E
Sbjct: 317 DQVLHMNPKHAEALTNRGVIYWMSGDTQSATQDFTKAIE 355



 Score = 40.0 bits (92), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 110/535 (20%), Positives = 192/535 (35%), Gaps = 104/535 (19%)

Query: 134 KGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDS-LEFYKRALQVH 192
           + +  +  G+  +A        E D  N PA+     V   + R  D+ LE + RAL+  
Sbjct: 28  RAETAIRSGDTTEAMELLDKAEELDPKN-PAISNNKGVIHAKNRDWDAALESFNRALEFD 86

Query: 193 PSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRK 252
           P+   A     G+   + G   +A   + RAL  DP+N+ AL   A +  + N+    ++
Sbjct: 87  PAYAEAY-TNRGMVYQEQGDFSQALLDYSRALVCDPQNITALYNRASLKSRQNQN---KE 142

Query: 253 GMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETAL----AVTNHGPTKSHSY 308
            +E + +   I P    A   L       G+  +V  L + AL     V    P +  + 
Sbjct: 143 ALEDINQVLRIDPRQKKARVLL-------GKIHIVSGLPDKALKEFQTVLTGDPEQVEAL 195

Query: 309 YNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKV 368
                ++     + +A  YY  ++K    P                              
Sbjct: 196 AGSGDAHFLSSRFSEAVTYYSEALKRQPTPL----------------------------- 226

Query: 369 LEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGA- 427
             +Y + C  L       ++L   +KA E   ++ ++DP + + F +LG  + + +    
Sbjct: 227 --LYMNRCSAL-------LKLNDPDKALEDCTESVRLDPNNPEGFYNLGNCMQALNRHTE 277

Query: 428 ALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSK 487
           A++AF  A  +     E+ P     N GV   + GE E A + F                
Sbjct: 278 AVEAFSKAIEI----NEQTP-RYFYNRGVSLSKLGESEKAGRDFD--------------- 317

Query: 488 TKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVL 547
                             Q+ H    +  H E   N+  + +          DT +A+  
Sbjct: 318 ------------------QVLHM---NPKHAEALTNRGVIYW-------MSGDTQSATQD 349

Query: 548 YRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKND 607
           +   +     +V AY+ LA++    N +  SI ++  ALKV  K    L  LG   ++  
Sbjct: 350 FTKAIEHDSKHVLAYVNLASVYLKDNQVDESIAVLERALKVAPKDREVLLSLGHAWMEKG 409

Query: 608 DWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKE 662
              KA   ++ A + +   D  A   L     F    N  +A     T LE A++
Sbjct: 410 KLDKALSFYKKAFERSSTPDQKAGTLLFTGQAFERSGNPSKALSNYTTALESAED 464


>gi|410678947|ref|YP_006931349.1| hypothetical protein BafHLJ01_0200 [Borrelia afzelii HLJ01]
 gi|408536335|gb|AFU74466.1| hypothetical protein BafHLJ01_0200 [Borrelia afzelii HLJ01]
          Length = 379

 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 75/318 (23%), Positives = 134/318 (42%), Gaps = 14/318 (4%)

Query: 123 IDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSL 182
           +D+ E S    +G  L+ +  + +A S F  +LE D +N  AL+G   +E  +  Y  ++
Sbjct: 22  LDVTEKSK---RGYQLIKEERLSEAESLFSNILEKDNENNYALVGLGDIERKKNNYDKAI 78

Query: 183 EFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDL 242
            +Y+R L  HP+   A+  G+G C   L    KA   ++  L+ DPEN+  L  +A    
Sbjct: 79  VYYQRCLIKHPNNNYAL-FGLGDCYRNLDNYKKATDIWEEYLKYDPENITVLTRVAS--- 134

Query: 243 QANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGP 302
              +    +K  +   +  E+ P    AL  +  H ++  + +         +   N   
Sbjct: 135 SYRKLKNFQKSKQTYLKVMELMPENDYALVGIG-HLYYDFKEYKEALKYWLKMYELNQSK 193

Query: 303 TKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSAL 362
                  ++   Y    ++ + G+Y+     EI+ P  F +  +GL        +++ AL
Sbjct: 194 VDVRVLTSIGNCYRKLREFTR-GIYFFKKALEIS-PSNF-YAIFGLADCYRGNKEYKEAL 250

Query: 363 TNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS 422
             +  ++E    N   L  +G  Y  L   E AQ   +KA  +   D   F  LG  LI 
Sbjct: 251 KYWLDIIEKDLKNNLVLTRVGDAYRYLNDYENAQIYYKKALDV---DFDMFAILGLALIQ 307

Query: 423 SDTGAALDAFKTARTLLK 440
            + G   +A    ++L+K
Sbjct: 308 KEQGKYEEALIAIKSLIK 325


>gi|325959562|ref|YP_004291028.1| hypothetical protein Metbo_1834 [Methanobacterium sp. AL-21]
 gi|325330994|gb|ADZ10056.1| Tetratricopeptide TPR_1 repeat-containing protein [Methanobacterium
           sp. AL-21]
          Length = 693

 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 85/359 (23%), Positives = 146/359 (40%), Gaps = 48/359 (13%)

Query: 117 YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 176
           YN A  ID      W  KG   L  G  E+A    +  LE + ++  AL+ +A V  +  
Sbjct: 325 YNHALEIDPEFSEAWTNKGATYLTLGRNEEALVCLEKALELNPNDQTALMNKASVLISVE 384

Query: 177 RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVA 236
            Y D++ +  R L++  +   A+ L     +  + +  ++ +  +R   +DP+N EA   
Sbjct: 385 DYDDAILYCDRVLEIDSNQVAALFLK-ARTQQNIAKFDESIETLERITSIDPDNDEAWFL 443

Query: 237 LAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALA 296
           + V     N+       +    +A EI P    A       ++F G+  ++         
Sbjct: 444 IGVSQEYLNKP---EDALVSFNKAIEIEPKNIGA-------WYFKGRSLMM--------- 484

Query: 297 VTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLG 356
                         L R+  +   YE   L           P  +   ++  G + ++ G
Sbjct: 485 --------------LGRADEALKSYEMVTLM---------DPENYE-AFHLTGLINMEQG 520

Query: 357 DFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDL 416
           ++  AL NF+ VL I PDN + L   G  Y  + + EKA E   +A  ++  + +A    
Sbjct: 521 NYDEALKNFDAVLNISPDNIDVLINKGQAYGFMDKPEKALEYFDEALDLESDNVEALNYR 580

Query: 417 GELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
           G  L     G    + KT   +L+   E  P    + IG+ + E GE+E A +SF +AL
Sbjct: 581 GVAL--KHMGDHDASIKTFEAVLEMEPEN-PW-AWHQIGLNYKEVGEYEKAIESFDNAL 635



 Score = 53.1 bits (126), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 65/292 (22%), Positives = 111/292 (38%), Gaps = 55/292 (18%)

Query: 89  LGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQAS 148
           +GV   YL K E            A   +NKA  I+      W  KG+ L+  G  ++A 
Sbjct: 444 IGVSQEYLNKPED-----------ALVSFNKAIEIEPKNIGAWYFKGRSLMMLGRADEAL 492

Query: 149 SAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRY 208
            ++++V   D +N  A      +   +G Y ++L+ +   L + P     + +  G    
Sbjct: 493 KSYEMVTLMDPENYEAFHLTGLINMEQGNYDEALKNFDAVLNISPDNIDVL-INKGQAYG 551

Query: 209 KLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCA 268
            + +  KA + F  AL L+ +NVEAL                               Y  
Sbjct: 552 FMDKPEKALEYFDEALDLESDNVEAL------------------------------NYRG 581

Query: 269 MALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYY 328
           +AL ++ +H          +   +T  AV    P    +++ +  +Y   G+YEKA   +
Sbjct: 582 VALKHMGDH----------DASIKTFEAVLEMEPENPWAWHQIGLNYKEVGEYEKAIESF 631

Query: 329 MASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLK 380
             ++ E  K   F+      G        F+ AL  F+ VL   P N + L+
Sbjct: 632 DNALDEDPK---FLLALLEKGVCLGMNKQFKEALECFDDVLIKDPQNPDALQ 680



 Score = 40.8 bits (94), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 2/66 (3%)

Query: 130 TWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNR-GRYSDSLEFYKRA 188
           TW  KG  L+  G++ +A   F   L A   N P  L   C+      RY +SLE + +A
Sbjct: 32  TWTRKGMALMGLGKINEAIECFDKSL-AIMPNYPWALDNMCMALLLVERYDESLECFDKA 90

Query: 189 LQVHPS 194
           L++HP 
Sbjct: 91  LEIHPD 96


>gi|296127341|ref|YP_003634593.1| hypothetical protein [Brachyspira murdochii DSM 12563]
 gi|296019157|gb|ADG72394.1| TPR repeat-containing protein [Brachyspira murdochii DSM 12563]
          Length = 750

 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 151/707 (21%), Positives = 269/707 (38%), Gaps = 130/707 (18%)

Query: 100 ETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADR 159
           E K  EK   +I    +YN  S    H  +  + K  L L +G ++    A ++      
Sbjct: 20  ENKDYEKAIEYIDKVIFYNGDSYDLYH--NRGLAKLNLRLYEGAIKDFDRAIEL------ 71

Query: 160 DNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLG-IGLCRYKLGQLGKARQ 218
            +  +   +   +F    Y +++E + + +++  S   +     IGLC+Y L +  +A +
Sbjct: 72  GDYNSYYERGLAKFYMAFYKEAIEDFNKVVELDKSSAASFAYNTIGLCKYNLNEFDEALK 131

Query: 219 AFQRALQLDPENVEALVALAV----MDLQANEAAGIRKGME----KMQRAFEIYPY-CAM 269
            + +A++ +P  + A   +A+    M L     + + K +E     ++   +IY     +
Sbjct: 132 YYNKAIETNPNLIIAYHNIALLKHSMGLDDEALSYLNKALEIDTNNIETYLKIYSIKLGL 191

Query: 270 ALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYM 329
            L   AN +        ++++ E         P   + Y  +       G Y +  L Y+
Sbjct: 192 GLEREANEY--------LDKIMEMY-------PDDLYIYDRIGNIKIDAG-YMEESLEYL 235

Query: 330 ASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQL 389
               EIN P+ FI  YY +     KL     AL+  EK L+I P+N +T   +  I   L
Sbjct: 236 KKALEIN-PN-FIDAYYDIAFALHKLNLNDEALSYLEKALQISPNNADTYFKIFLIKRAL 293

Query: 390 GQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKA--GEEVP 447
           G  + A   L K  +ID  D   + ++  + I       L+ ++ A   L KA   +   
Sbjct: 294 GDYDGALSCLEKILEIDDTDVAIYNEIALIKIE------LELYEEALYYLNKALCIDNNN 347

Query: 448 IEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQL 507
            E+ N IG+++  K  +E A ++F  AL                  + + SM    DM  
Sbjct: 348 AEIYNTIGLVYHYKRNYEEAIKNFNKAL------------------ELNTSM----DM-- 383

Query: 508 FHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAA 567
                                +N+     ++HD   A   Y   L     Y  AY+ L  
Sbjct: 384 -------------------AYYNIGLSYYEMHDYEKAIEYYNKALEINTQYSAAYINLGL 424

Query: 568 IAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKD 627
           I     N Q +I     AL++N  Y  +   +   E+  +D+ KA E F  A        
Sbjct: 425 IEHNFGNYQEAINYYKRALEINPNYSLSYYNIALAEMSLEDYDKALEDFNHA-------- 476

Query: 628 SYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAE 687
               L LG +N      N       EA + +KA E Y +V+  + + + A       L+ 
Sbjct: 477 ----LELG-YNEADIYTNIGLIYSREAIY-DKAIEYYNKVLEINPNKVNAYYNIAFCLSN 530

Query: 688 KGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYN 747
             ++  + +++ +V     G+              VY+ +G     +  Y+  +R F   
Sbjct: 531 MDKYKEALEIYDKVIRMYPGNF------------DVYYERGYTKYRVSKYEEAIRDF--- 575

Query: 748 TDAQILLYLARTHYEAEQWQDCKKSLL-----------RAIHLAPSN 783
               I++ +   HY A  ++ C K  L           +AI   P+N
Sbjct: 576 ---DIIINVNSKHYNAYYYRGCSKKYLKNYDEAIKDFDKAIEYNPNN 619



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 73/330 (22%), Positives = 131/330 (39%), Gaps = 21/330 (6%)

Query: 85  ILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEV 144
           I N +G+ Y Y       +R  EE    A + +NKA  ++      +   G       + 
Sbjct: 350 IYNTIGLVYHY-------KRNYEE----AIKNFNKALELNTSMDMAYYNIGLSYYEMHDY 398

Query: 145 EQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIG 204
           E+A   +   LE +     A +    +E N G Y +++ +YKRAL+++P+   +    I 
Sbjct: 399 EKAIEYYNKALEINTQYSAAYINLGLIEHNFGNYQEAINYYKRALEINPNYSLS-YYNIA 457

Query: 205 LCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIY 264
           L    L    KA + F  AL+L     +    + ++    +  A   K +E   +  EI 
Sbjct: 458 LAEMSLEDYDKALEDFNHALELGYNEADIYTNIGLI---YSREAIYDKAIEYYNKVLEIN 514

Query: 265 PYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 324
           P     +N   N  F        ++  E    V    P     YY    + +    YE+A
Sbjct: 515 P---NKVNAYYNIAFCLSNMDKYKEALEIYDKVIRMYPGNFDVYYERGYTKYRVSKYEEA 571

Query: 325 GLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGH 384
            +     +  +N  H   + Y G  +  LK  ++  A+ +F+K +E  P+N +       
Sbjct: 572 -IRDFDIIINVNSKHYNAYYYRGCSKKYLK--NYDEAIKDFDKAIEYNPNNPDYYSEKAS 628

Query: 385 IYVQLGQIEKAQELLRKAAKIDPRDAQAFI 414
            Y  L +  ++ E   KA +++  D   +I
Sbjct: 629 CYDYLNKYRESIENYDKAIELNDNDWFLYI 658


>gi|196017383|ref|XP_002118506.1| hypothetical protein TRIADDRAFT_62542 [Trichoplax adhaerens]
 gi|190578834|gb|EDV19007.1| hypothetical protein TRIADDRAFT_62542 [Trichoplax adhaerens]
          Length = 1485

 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 139/708 (19%), Positives = 288/708 (40%), Gaps = 112/708 (15%)

Query: 117 YNKASRIDM-----HEPS---TWVGKGQLLLAKGEVEQASS----AFKIVLEADRDNVPA 164
           YNK+ +I +     + PS   T+   GQ+   +G+ + A S    + KI L    DN P+
Sbjct: 167 YNKSLKIKLTQLGDNHPSIAVTYTNIGQVYKDQGKYDDALSMCNKSLKIQLTQLGDNHPS 226

Query: 165 LLGQ----ACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAF 220
           +         V +++G+Y D+L  Y ++L++  +  G     + +    +GQ+   +  +
Sbjct: 227 IATTYHSIGGVYYHQGKYDDALSMYNKSLKIDLTQLGDNHPSVAVTYTNIGQVYNDQGKY 286

Query: 221 QRALQLDPENVE-ALVALA----VMDLQANEAAGIRKGMEKMQRAFEIY----------- 264
             AL +  ++++  L  L      +    +   G+ K   K   A  IY           
Sbjct: 287 DDALSMYNKSLKIKLTQLGDNHPSIATTYHNIGGVYKVQGKYDDAVSIYNKSLKIDLTQL 346

Query: 265 ----PYCAMALNYLANHFFFTGQHFLVEQLTETALAV------TNHGPTKSHSYYNLARS 314
               P  A   + +   ++  G++     +   +L +       NH P+ + +Y N+  +
Sbjct: 347 GDNHPSIATTYHSIGGVYYHQGKYGDALSMYNKSLKIKLTQLGDNH-PSIAVTYTNIGLA 405

Query: 315 YHSKGDYEKAGLYYMASVK----EINKPHEFI-FPYYGLGQVQLKLGDFRSALTNFEKVL 369
           Y  +G Y+ A   Y  S+K    ++   H  I   Y  +GQV    G +  AL+ + K L
Sbjct: 406 YKDQGKYDDALSMYNKSLKIHLTQLGDNHPSIAVTYTNIGQVYNDQGKYDDALSMYNKSL 465

Query: 370 EI--------YPDNCETLKALGHIYVQLGQIEKAQELLRKAAKID--------PRDAQAF 413
           +I        +P    T  ++G +Y   G+ + A  +  K+ KI         P +A  +
Sbjct: 466 KIKLTQLGDNHPSIATTYHSIGGVYYHQGKYDDALSMYNKSLKIKLTQLGDNHPSNATTY 525

Query: 414 IDLGELLISSDTGAALDAF----KTARTLLKKAGEEVPIE--VLNNIGVIHFEKGEFESA 467
             +G++      G   DA     K+ +  L + G+  P      ++IG ++ ++G+++ A
Sbjct: 526 HSIGDVYYHQ--GKYDDALSMYNKSLKIKLTQLGDNHPSNATTYHSIGGVYEDQGKYDDA 583

Query: 468 HQSFKDALGDGIWLTLLDSKTKTYVIDASASM-LQFKDMQLFHRFENDGNHVELPWNKVT 526
              +  +L   I LT L         D   S+ + + ++   ++ +   +     +NK +
Sbjct: 584 LSMYNKSL--KIKLTQLG--------DNHPSIAMTYHNIGSVYKDQGKYDDALSMYNK-S 632

Query: 527 VLFNLARLLEQIHDTVAASVLYRLILF----KYQDYVDAY-----LRLAAIAKARNNLQL 577
           +   L +L +  H ++A +  Y   ++    KY D +  Y     ++L  +     ++  
Sbjct: 633 LKIKLTQLGDN-HPSIATTYHYIGSVYEDQGKYDDALSMYNKSLKIKLTQLGDNHPSIAT 691

Query: 578 SIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNW 637
           +   +       GKY +ALSM        +  +K K T           D++ ++++   
Sbjct: 692 TYHNIGNVYNDQGKYDDALSMY-------NKSLKIKLTQLG--------DNHPSIAMTYH 736

Query: 638 NYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDL 697
           N  +   ++ +     + + +  K   T++   H S     +  G V  ++G++D +  +
Sbjct: 737 NIGSVYEDQGKYDDALSIYNKSLKIHLTQLGDNHPSIATTYHNIGSVYEDQGKYDDALSM 796

Query: 698 FT---QVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLR 742
           +    ++Q    G     +   + N+  VY  QG +  A+ MY   L+
Sbjct: 797 YNKSLKIQLTQLGDNHPSIAATYHNIGGVYKDQGKYDDALSMYNKSLK 844



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 91/426 (21%), Positives = 178/426 (41%), Gaps = 76/426 (17%)

Query: 113 ATQYYNKASRIDM-----HEPS---TWVGKGQLLLAKGEVEQASSAF----KIVLEADRD 160
           A   YNK+ +ID+     + PS   T+   G +   +G+   A S +    KI L    D
Sbjct: 331 AVSIYNKSLKIDLTQLGDNHPSIATTYHSIGGVYYHQGKYGDALSMYNKSLKIKLTQLGD 390

Query: 161 NVPAL------LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLG 214
           N P++      +G A  +  +G+Y D+L  Y ++L++H +  G     I +    +GQ+ 
Sbjct: 391 NHPSIAVTYTNIGLAYKD--QGKYDDALSMYNKSLKIHLTQLGDNHPSIAVTYTNIGQVY 448

Query: 215 KARQAFQRALQLDPENVE-ALVALA----VMDLQANEAAGIRKGMEKMQRAFEIY----- 264
             +  +  AL +  ++++  L  L      +    +   G+     K   A  +Y     
Sbjct: 449 NDQGKYDDALSMYNKSLKIKLTQLGDNHPSIATTYHSIGGVYYHQGKYDDALSMYNKSLK 508

Query: 265 ----------PYCAMALNYLANHFFFTGQHFLVEQLTETALAV------TNHGPTKSHSY 308
                     P  A   + + + ++  G++     +   +L +       NH P+ + +Y
Sbjct: 509 IKLTQLGDNHPSNATTYHSIGDVYYHQGKYDDALSMYNKSLKIKLTQLGDNH-PSNATTY 567

Query: 309 YNLARSYHSKGDYEKAGLYYMASVK----EINKPHEFI-FPYYGLGQVQLKLGDFRSALT 363
           +++   Y  +G Y+ A   Y  S+K    ++   H  I   Y+ +G V    G +  AL+
Sbjct: 568 HSIGGVYEDQGKYDDALSMYNKSLKIKLTQLGDNHPSIAMTYHNIGSVYKDQGKYDDALS 627

Query: 364 NFEKVLEI--------YPDNCETLKALGHIYVQLGQIEKAQELLRKAAKID--------P 407
            + K L+I        +P    T   +G +Y   G+ + A  +  K+ KI         P
Sbjct: 628 MYNKSLKIKLTQLGDNHPSIATTYHYIGSVYEDQGKYDDALSMYNKSLKIKLTQLGDNHP 687

Query: 408 RDAQAFIDLGELLISSDTGAALDAF----KTARTLLKKAGEEVPIEVL--NNIGVIHFEK 461
             A  + ++G   + +D G   DA     K+ +  L + G+  P   +  +NIG ++ ++
Sbjct: 688 SIATTYHNIGN--VYNDQGKYDDALSMYNKSLKIKLTQLGDNHPSIAMTYHNIGSVYEDQ 745

Query: 462 GEFESA 467
           G+++ A
Sbjct: 746 GKYDDA 751



 Score = 59.7 bits (143), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 93/436 (21%), Positives = 178/436 (40%), Gaps = 76/436 (17%)

Query: 110  FILATQYYNKASRIDM-----HEPS---TWVGKGQLLLAKGEVEQASSAF----KIVLEA 157
            F  A   YNK+ +I +     + PS   T+   G +   +G+ + A S +    KI L  
Sbjct: 874  FDDALSMYNKSLKIHLTQLGDNHPSIAMTYHNIGSVYKDQGKYDDALSMYNKSLKIQLTQ 933

Query: 158  DRDNVPALLGQAC----VEFNRGRYSDSLEFYKRALQV--------HPSCPGAIRLGIGL 205
              DN P++    C    V + + +Y D+L  Y ++L++        HPS        IGL
Sbjct: 934  LGDNHPSIATTYCNIGGVYYYQSKYDDALSMYNKSLKIKLTQLGDNHPSI-AVTYTNIGL 992

Query: 206  CRYKLGQLGKARQAFQRALQLD----PENVEALVALAV-MDLQANEAAGIRKGMEKMQRA 260
                 G+   A   + ++L++      +N  ++ A    + L  N+       +    ++
Sbjct: 993  VYKNQGKYDDALSMYNKSLKIQLTQLGDNYPSIAATYTNIGLVYNDQGKYDDALSMYNKS 1052

Query: 261  FEI--------YPYCAMALNYLANHFFFTGQHFLVEQLTETALAV------TNHGPTKSH 306
             +I        +P  A     + + +   G++     +   +L +       NH P+ + 
Sbjct: 1053 LKINLTQLGDNHPSIATTYCNIGSVYKDQGKYDDALSMYNKSLKIQLTQLGDNH-PSIAT 1111

Query: 307  SYYNLARSYHSKGDYEKAGLYYMASVK----EINKPHEFI-FPYYGLGQVQLKLGDFRSA 361
            +Y+N+   Y  +G Y+ A   Y  S+K    ++   H  I   Y+ +G V    G +  A
Sbjct: 1112 TYHNIGSVYEDQGKYDDALSIYNKSLKIDLTQLGDNHSNIATTYHNIGSVYEDQGKYDDA 1171

Query: 362  LTNFEKVLEI--------YPDNCETLKALGHIYVQLGQIEKAQELLRKAAKI-------- 405
            L+ + K L+I        +P    T + +G +Y   G+ + A  +  K+ KI        
Sbjct: 1172 LSMYNKSLKIKLTQLGDNHPSIAATYRNIGQVYNDQGKYDDALSMYNKSLKIHLTQLGDN 1231

Query: 406  DPRDAQAFIDLGELLISSDTGAALDAF----KTARTLLKKAGEEVP-IEVL-NNIGVIHF 459
             P  A  + ++G +      G   DA     K+ +  L +  +  P I V   NIG ++ 
Sbjct: 1232 HPSIATTYHNIGSVY----QGKYDDALSMYNKSMKIDLTQLDDNHPSIAVTYTNIGQVYK 1287

Query: 460  EKGEFESAHQSFKDAL 475
            ++G+++ A   +  +L
Sbjct: 1288 DQGKYDDALSMYNKSL 1303



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 132/692 (19%), Positives = 270/692 (39%), Gaps = 122/692 (17%)

Query: 117  YNKASRIDM-----HEPS---TWVGKGQLLLAKGEVEQASSAF----KIVLEADRDNVPA 164
            YNK+ +I +     + PS   T+   G +   +G+ + A S +    KI L    DN P+
Sbjct: 587  YNKSLKIKLTQLGDNHPSIAMTYHNIGSVYKDQGKYDDALSMYNKSLKIKLTQLGDNHPS 646

Query: 165  LLGQ----ACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAF 220
            +         V  ++G+Y D+L  Y ++L++  +  G     I    + +G +   +  +
Sbjct: 647  IATTYHYIGSVYEDQGKYDDALSMYNKSLKIKLTQLGDNHPSIATTYHNIGNVYNDQGKY 706

Query: 221  QRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFF 280
              AL +                  N++  I     K+ +  + +P  AM  + + + +  
Sbjct: 707  DDALSM-----------------YNKSLKI-----KLTQLGDNHPSIAMTYHNIGSVYED 744

Query: 281  TGQHFLVEQLTETALAV------TNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK- 333
             G++     +   +L +       NH P+ + +Y+N+   Y  +G Y+ A   Y  S+K 
Sbjct: 745  QGKYDDALSIYNKSLKIHLTQLGDNH-PSIATTYHNIGSVYEDQGKYDDALSMYNKSLKI 803

Query: 334  ---EINKPHEFIF-PYYGLGQVQLKLGDFRSALTNFEKVLEI--------YPDNCETLKA 381
               ++   H  I   Y+ +G V    G +  AL+ + K L+I        +P    T   
Sbjct: 804  QLTQLGDNHPSIAATYHNIGGVYKDQGKYDDALSMYNKSLKIQLTQLGDNHPSIATTYHN 863

Query: 382  LGHIYVQLGQIEKAQELLRKAAKID--------PRDAQAFIDLGELLISSDTGAALDAF- 432
            +G +Y    + + A  +  K+ KI         P  A  + ++G   +  D G   DA  
Sbjct: 864  IGGVYYYQSKFDDALSMYNKSLKIHLTQLGDNHPSIAMTYHNIGS--VYKDQGKYDDALS 921

Query: 433  ---KTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSK 487
               K+ +  L + G+  P       NIG +++ + +++ A   +  +L   I LT L   
Sbjct: 922  MYNKSLKIQLTQLGDNHPSIATTYCNIGGVYYYQSKYDDALSMYNKSLK--IKLTQLGDN 979

Query: 488  TKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVL 547
              +  +        + ++ L ++ +   +     +NK ++   L +L +  + ++AA+  
Sbjct: 980  HPSIAV-------TYTNIGLVYKNQGKYDDALSMYNK-SLKIQLTQLGDN-YPSIAATYT 1030

Query: 548  YRLILF----KYQDYVDAY-----LRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSM 598
               +++    KY D +  Y     + L  +     ++  +   +    K  GKY +ALSM
Sbjct: 1031 NIGLVYNDQGKYDDALSMYNKSLKINLTQLGDNHPSIATTYCNIGSVYKDQGKYDDALSM 1090

Query: 599  LG-----DLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLE 653
                    L    D+      T+       + +  Y            AL    ++ K++
Sbjct: 1091 YNKSLKIQLTQLGDNHPSIATTYHNIGSVYEDQGKYDD----------ALSIYNKSLKID 1140

Query: 654  ATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQ---VQEAASGSVF 710
             T L             H++     +  G V  ++G++D +  ++ +   ++    G   
Sbjct: 1141 LTQLGD----------NHSNIATTYHNIGSVYEDQGKYDDALSMYNKSLKIKLTQLGDNH 1190

Query: 711  VQMPDVWINLAHVYFAQGNFALAMKMYQNCLR 742
              +   + N+  VY  QG +  A+ MY   L+
Sbjct: 1191 PSIAATYRNIGQVYNDQGKYDDALSMYNKSLK 1222



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 107/484 (22%), Positives = 194/484 (40%), Gaps = 81/484 (16%)

Query: 305 SHSYYNLARSYHSKGDYEKAGLYYMASVK----EINKPHEFI-FPYYGLGQVQLKLGDFR 359
           S SY N+A  Y ++G Y  A   Y  S+K    ++   H  I   Y  +GQV    G + 
Sbjct: 144 SESYRNIASIYGNQGKYNDALSMYNKSLKIKLTQLGDNHPSIAVTYTNIGQVYKDQGKYD 203

Query: 360 SALTNFEKVLEI--------YPDNCETLKALGHIYVQLGQIEKAQELLRKAAKID----- 406
            AL+   K L+I        +P    T  ++G +Y   G+ + A  +  K+ KID     
Sbjct: 204 DALSMCNKSLKIQLTQLGDNHPSIATTYHSIGGVYYHQGKYDDALSMYNKSLKIDLTQLG 263

Query: 407 ---PRDAQAFIDLGELLISSDTGAALDAF----KTARTLLKKAGEEVP--IEVLNNIGVI 457
              P  A  + ++G+  + +D G   DA     K+ +  L + G+  P      +NIG +
Sbjct: 264 DNHPSVAVTYTNIGQ--VYNDQGKYDDALSMYNKSLKIKLTQLGDNHPSIATTYHNIGGV 321

Query: 458 HFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNH 517
           +  +G+++ A   +  +L   I LT L     +      A+         +H+ +  G+ 
Sbjct: 322 YKVQGKYDDAVSIYNKSL--KIDLTQLGDNHPSI-----ATTYHSIGGVYYHQGKY-GDA 373

Query: 518 VELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQD---YVDAY--------LRLA 566
           + + +NK ++   L +L +  H ++A  V Y  I   Y+D   Y DA         + L 
Sbjct: 374 LSM-YNK-SLKIKLTQLGDN-HPSIA--VTYTNIGLAYKDQGKYDDALSMYNKSLKIHLT 428

Query: 567 AIAKARNNLQLSIELVNEALKVNGKYPNALSMLG-DLELK----NDDWVKAKETFRAASD 621
            +     ++ ++   + +     GKY +ALSM    L++K     D+      T+     
Sbjct: 429 QLGDNHPSIAVTYTNIGQVYNDQGKYDDALSMYNKSLKIKLTQLGDNHPSIATTYH---- 484

Query: 622 ATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGA 681
                 S   +      Y  AL    ++ K++ T L             H SN    +  
Sbjct: 485 ------SIGGVYYHQGKYDDALSMYNKSLKIKLTQLGD----------NHPSNATTYHSI 528

Query: 682 GVVLAEKGQFDVSKDLFT---QVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQ 738
           G V   +G++D +  ++    +++    G         + ++  VY  QG +  A+ MY 
Sbjct: 529 GDVYYHQGKYDDALSMYNKSLKIKLTQLGDNHPSNATTYHSIGGVYEDQGKYDDALSMYN 588

Query: 739 NCLR 742
             L+
Sbjct: 589 KSLK 592



 Score = 42.7 bits (99), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 40/169 (23%), Positives = 78/169 (46%), Gaps = 21/169 (12%)

Query: 117  YNKASRIDM-----HEPS---TWVGKGQLLLAKGEVEQASSAF----KIVLEADRDNVPA 164
            YNK+ +ID+     + PS   T+   GQ+   +G+ + A S +    KI L    DN P+
Sbjct: 1257 YNKSMKIDLTQLDDNHPSIAVTYTNIGQVYKDQGKYDDALSMYNKSLKIQLTQLGDNHPS 1316

Query: 165  LLGQ----ACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAF 220
            +         V  ++G+Y D+L  Y ++L++  +  G     I    + +G + K +  +
Sbjct: 1317 IATTYHNIGSVYKDQGKYDDALSMYNKSLKIQLTQLGDNHPSIATTYHNIGSVYKDQGKY 1376

Query: 221  QRALQLDPENVE-ALVALAVMDLQANE----AAGIRKGMEKMQRAFEIY 264
              AL +  ++++ +LV L    L   +     A +   +   ++AF +Y
Sbjct: 1377 DDALSMLNKSLQISLVTLGENHLHTAQLYRSQAVVNYKLSNYRQAFSLY 1425


>gi|398805153|ref|ZP_10564134.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
           [Polaromonas sp. CF318]
 gi|398092315|gb|EJL82730.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
           [Polaromonas sp. CF318]
          Length = 733

 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 79/282 (28%), Positives = 128/282 (45%), Gaps = 26/282 (9%)

Query: 134 KGQLLLAKGEVEQA----SSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRAL 189
           +G  L  +G+ E+A     SA  ++ E  R    A   +  +  +RG    +LE + +A+
Sbjct: 35  QGMALEQQGQPEEALLRYDSAIALMPELAR----AHFNRGTILLDRGDAQQALEAFTKAV 90

Query: 190 QVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVAL-AVMDLQANEAA 248
           Q  P   GA    +G    +L Q   A  A+++AL L P+  EA +AL A ++ Q  +  
Sbjct: 91  QYKPDSAGA-HFNLGAAYSRLDQHEAAMSAYRQALSLKPDFAEAEMALGAALEEQGRDEE 149

Query: 249 GIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALA---VTNHGPTKS 305
            +R      +RA EI P  A A + LA           ++Q  E A     +    P   
Sbjct: 150 AVRS----YRRALEIQPGYAEAQDKLAYSLV------RLDQFDEAAACFRRILVRDPHNV 199

Query: 306 HSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNF 365
            +  +L    + KG + +A   Y  +VK   KP +F+  +  LG V + L  F  A  ++
Sbjct: 200 EALNSLGLLLNIKGQFHEAVSQYRLAVKL--KP-DFLAAHGNLGNVLMDLHQFSDAAASY 256

Query: 366 EKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 407
            +VLE+ PD+ +    LG  +  LG ++KA    RKA  + P
Sbjct: 257 HRVLELNPDSADAYNNLGSAFKDLGDLDKALASYRKAMTLKP 298



 Score = 45.4 bits (106), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 52/203 (25%), Positives = 90/203 (44%), Gaps = 21/203 (10%)

Query: 288 EQLTETALAVTNHG-PTKSHSYYN--------LARSYHSKG----DYEKAGLYYMASVKE 334
           EQL E  +A+   G P ++   Y+        LAR++ ++G    D   A     A  K 
Sbjct: 30  EQLLEQGMALEQQGQPEEALLRYDSAIALMPELARAHFNRGTILLDRGDAQQALEAFTKA 89

Query: 335 INKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK 394
           +    +    ++ LG    +L    +A++ + + L + PD  E   ALG    + G+ E+
Sbjct: 90  VQYKPDSAGAHFNLGAAYSRLDQHEAAMSAYRQALSLKPDFAEAEMALGAALEEQGRDEE 149

Query: 395 AQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLN 452
           A    R+A +I P  A+A   L   L+       LD F  A    ++     P  +E LN
Sbjct: 150 AVRSYRRALEIQPGYAEAQDKLAYSLVR------LDQFDEAAACFRRILVRDPHNVEALN 203

Query: 453 NIGVIHFEKGEFESAHQSFKDAL 475
           ++G++   KG+F  A   ++ A+
Sbjct: 204 SLGLLLNIKGQFHEAVSQYRLAV 226



 Score = 45.1 bits (105), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 75/316 (23%), Positives = 120/316 (37%), Gaps = 74/316 (23%)

Query: 99  IETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEAD 158
           ++ K      HF L   Y    SR+D HE                   A SA++  L   
Sbjct: 90  VQYKPDSAGAHFNLGAAY----SRLDQHE------------------AAMSAYRQALSLK 127

Query: 159 RDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGA-IRLGIGLCRYKLGQLGKAR 217
            D   A +        +GR  +++  Y+RAL++ P    A  +L   L R  L Q  +A 
Sbjct: 128 PDFAEAEMALGAALEEQGRDEEAVRSYRRALEIQPGYAEAQDKLAYSLVR--LDQFDEAA 185

Query: 218 QAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANH 277
             F+R L  DP NVEAL +L ++    N      + + + + A ++ P      ++LA H
Sbjct: 186 ACFRRILVRDPHNVEALNSLGLL---LNIKGQFHEAVSQYRLAVKLKP------DFLAAH 236

Query: 278 FFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINK 337
                       L    + +        H + + A SYH               V E+N 
Sbjct: 237 ----------GNLGNVLMDL--------HQFSDAAASYHR--------------VLELNP 264

Query: 338 PHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPD----NCETLKALGHIYVQLGQ-- 391
             +    Y  LG     LGD   AL ++ K + + PD    +   L    ++  Q  Q  
Sbjct: 265 --DSADAYNNLGSAFKDLGDLDKALASYRKAMTLKPDLLVAHSNLLMVQNYLSEQPPQEL 322

Query: 392 IEKAQELLRKAAKIDP 407
           +E+A+     AA++ P
Sbjct: 323 VEEARRFGETAARLAP 338


>gi|154150715|ref|YP_001404333.1| hypothetical protein Mboo_1172 [Methanoregula boonei 6A8]
 gi|153999267|gb|ABS55690.1| TPR repeat-containing protein [Methanoregula boonei 6A8]
          Length = 4079

 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 96/356 (26%), Positives = 151/356 (42%), Gaps = 35/356 (9%)

Query: 113  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
            A   ++K   +D      +  KG  L A G++  A  AF  V++AD  +V   L +    
Sbjct: 3323 AITAFDKDIDLDAGNNDAFYHKGVSLAATGKLTNAMEAFDHVIQADPGSVQGWLHRGMAL 3382

Query: 173  FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 232
            F+ GR++D++  YK+AL++ P+   A  L +G   Y L    +A  AF RAL L  E  E
Sbjct: 3383 FDLGRFNDAISSYKKALEIGPTNADAWYL-VGRSYYALNTYDEAIAAFDRALDLQGEFAE 3441

Query: 233  A-------LVALA-------------VMDLQANEAAGIRKGME--KMQRAFEIYPYCAMA 270
            A       L A+              V+  + +EA    KGM   K+QRA +       A
Sbjct: 3442 AWYYKGRTLFAMGKYGEAVSAYDSTLVLRPKHDEAF-YHKGMALLKLQRAGDAVSAFDQA 3500

Query: 271  LNYLAN-HFFFTGQHFLVEQLTETALAVTNHGPT------KSHSYYNLARSYHSKGDYEK 323
            L    N  + +TG+   +  L     A++ +          S +YY    SY S G Y+ 
Sbjct: 3501 LRLRPNFSYIWTGKGMALAALDRHKDAISCYTKAIALDRKDSRAYYQAGLSYLSLGRYQD 3560

Query: 324  AGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALG 383
            A   + A++  +  P      +Y  G+    +  F  A+T+F+K L    D  E     G
Sbjct: 3561 AIRNFEATL--VQHP-SCARAFYAKGRALCGVSMFHEAITSFDKALSEQSDYPEAWLYRG 3617

Query: 384  HIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSD-TGAALDAFKTARTL 438
                 L + E+A +    A   +   A A ++ G  LI  + TG AL A +   T+
Sbjct: 3618 IAEANLEEFEEALDCYNHALAQNESYATALLNKGRALIHLERTGEALAAIEKVLTI 3673



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 77/310 (24%), Positives = 131/310 (42%), Gaps = 19/310 (6%)

Query: 131 WVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQ 190
           WV +G  L     +++A+ AF   +E D     A L +    F+  RY D+     +A +
Sbjct: 247 WVIQGISLYRLRRLDEAADAFDRAIEQDPLAPDAWLYKGFSLFDMERYEDATYALDKAAE 306

Query: 191 VHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGI 250
           + P     I    G    +LG+  +A   F RAL  +PEN +AL +  V  +        
Sbjct: 307 LSPQTT-KIYYTRGKANQRLGKYREAVADFDRALAAEPENADALYSRGVSCIH------- 358

Query: 251 RKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH----GPTKSH 306
              + +   +  ++     +    A   +F G         + A++   H     P  + 
Sbjct: 359 ---LSRYDESLSVFDRILASQGDHAGASYFRGVVLSRLGRQDEAISAFEHTLAIDPGCAS 415

Query: 307 SYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFE 366
           + Y +  +  S G Y  A   Y  ++K   +P ++    Y  G    KLG+   AL  F+
Sbjct: 416 AAYQIGLASASLGRYSDAVAAYDRALK--IRP-DYPDAVYHKGFALAKLGNSEDALLEFD 472

Query: 367 KVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDT- 425
           + L   P N       G + V+ G++E+A E L K+  + P +AQ + D G  L+ ++  
Sbjct: 473 RALTENPGNAPAYHQKGQLLVRTGRLEEALEALNKSIALKPDNAQVYYDKGSALLKAERF 532

Query: 426 GAALDAFKTA 435
           G AL+AF  A
Sbjct: 533 GPALEAFDQA 542



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 87/356 (24%), Positives = 134/356 (37%), Gaps = 56/356 (15%)

Query: 92   YYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAF 151
            Y+  L  IE  + EK      A   + K  RID   P      G +L    + ++A   F
Sbjct: 1948 YHLGLAYIEQHRDEK------AIAAFAKTLRIDPENPDALFQAGIVLARLEKYDEAIGLF 2001

Query: 152  KIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLG 211
               LE  ++N   L  + C  F   +YS+++  + RAL +  +  GA+ +  G  R  LG
Sbjct: 2002 DRYLELGKENAGILYERGCAYFALQKYSEAIASFDRALALDANHIGAL-VKKGQSRANLG 2060

Query: 212  QLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMAL 271
            Q  +A   F R + LDPENV   +A  VM       A     +  + RA E         
Sbjct: 2061 QYEEAVTLFDRVITLDPENV---IAHFVMGTALARLARYEDAVVALDRALE--------- 2108

Query: 272  NYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMAS 331
                    + G +  +                K +S Y L R   S   + K      A 
Sbjct: 2109 --------YDGNNARIYA-------------CKGYSLYRLGRFKESAESFAK------AQ 2141

Query: 332  VKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQ 391
             +E   P    F     G+  L  G +   +  F+K+L I P + +     G  Y  L  
Sbjct: 2142 KREPKDPFSLRF----RGKSLLHNGKWEEGIAIFDKLLGIEPKSADAWYYKGIAYSHLSL 2197

Query: 392  IEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP 447
             ++AQE   +A  ID   A A+   G +L   +       F+ +    ++A E  P
Sbjct: 2198 HDEAQESFEQALTIDGECATAWYQKGLVLFERER------FEESLPAFERAAELAP 2247



 Score = 59.7 bits (143), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 84/346 (24%), Positives = 134/346 (38%), Gaps = 74/346 (21%)

Query: 134 KGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHP 193
           +G +L   G  ++A SAF+  L  D     A         + GRYSD++  Y RAL++ P
Sbjct: 386 RGVVLSRLGRQDEAISAFEHTLAIDPGCASAAYQIGLASASLGRYSDAVAAYDRALKIRP 445

Query: 194 SCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPEN--------------------VEA 233
             P A+    G    KLG    A   F RAL  +P N                    +EA
Sbjct: 446 DYPDAV-YHKGFALAKLGNSEDALLEFDRALTENPGNAPAYHQKGQLLVRTGRLEEALEA 504

Query: 234 L---VALAVMDLQA--NEAAGIRKG------MEKMQRAFEIYPYCAMALNYLANHFFFTG 282
           L   +AL   + Q   ++ + + K       +E   +A  IYP      NY+ N ++  G
Sbjct: 505 LNKSIALKPDNAQVYYDKGSALLKAERFGPALEAFDQAIGIYP------NYV-NAYYNKG 557

Query: 283 QHFLVEQLTETALAVTNHG----PTKSHSYYN-------LARSY---------------H 316
             F    + + AL   +H     PT + + Y+       L R                 +
Sbjct: 558 IAFSRTGMRKEALEAFDHAIAIDPTHTLALYHRGTMLSGLGRYADAAAAYDAVLALSPQN 617

Query: 317 SKGDYEKA-GLYYMASVKE--------INKPHEFIFPYYGLGQVQLKLGDFRSALTNFEK 367
           +   YEK   L  ++  K+        + +    I  +   G     LG F  A+  F++
Sbjct: 618 TSALYEKGVALMQLSRWKDAAEAFGQAVEQDPGLIDAWLAFGTCNANLGKFPDAIAAFDR 677

Query: 368 VLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAF 413
           V+ + P N +     G   V  G+ E+A   L +A +  PRD +A+
Sbjct: 678 VIALSPKNTQAFIHKGIALVTTGKFEEAIAALNRALEDAPRDERAW 723



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 99/398 (24%), Positives = 158/398 (39%), Gaps = 48/398 (12%)

Query: 113  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
            A Q +++    D      W  KG  LL+ G++  A  A    LE   DN      +A   
Sbjct: 2575 AIQCFDRVVTSDTGCAQAWFRKGSALLSNGDLRAAIEALTKALELKPDNANGWYDRAVAL 2634

Query: 173  FNRGRYSDSLEFYKRALQVHPSCPGA-IRLGIGLCRYKLGQLGKARQAFQRALQLDPE-- 229
               GRY +S+  Y RAL ++P    A    G  L R  LG+  +A +AF+ A  +DPE  
Sbjct: 2635 AGLGRYEESIPSYDRALSLNPKYTSAYFDKGSALSR--LGRDRQAIEAFEMASAIDPEFA 2692

Query: 230  ---------------NVEALVAL-AVMDLQ-ANEAAGIRKG-----MEKMQRAFEIYPYC 267
                           N EA+ A  A + L  AN  A   KG     ++K   A  ++   
Sbjct: 2693 VAYLEKGLALARLSKNKEAVAAFDATLALDPANVPALFNKGLALANLKKFADAITVFD-- 2750

Query: 268  AMALNYLANHF---FFTGQHFLVEQLTETALAVTNHG----PTKSHSYYNLARSYHSKGD 320
              AL   A H+   F  G      +  + A+   +H     P +   +Y    +    G 
Sbjct: 2751 -AALRIDAKHYEAWFAKGYAQSRLRHYDDAVGAFDHALAIDPGRYAVWYEKGVALARAGK 2809

Query: 321  YEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLK 380
             ++A   +  ++   +K  E     Y  G+  L+LG+   A+T+F + L++     +   
Sbjct: 2810 NDEAVAAFSEAIARDDKKPE---AQYEKGRALLELGEDEQAVTSFTRALDLDTSFGDAAY 2866

Query: 381  ALGHIYVQLGQIEKAQELLRK--AAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTL 438
             LG    ++G+   A     +  AA+ D  DA     +    +  D   A+ A++ AR +
Sbjct: 2867 YLGLALERVGKFTDAITAYDRMVAARPDHSDAWYHRGIASERLGRDND-AVQAYEKARQI 2925

Query: 439  LKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALG 476
                 E   + +L   G      G+FE A   F  ALG
Sbjct: 2926 -----EPHNLPLLFADGRAWARLGQFEDAIHLFDIALG 2958



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 68/296 (22%), Positives = 117/296 (39%), Gaps = 44/296 (14%)

Query: 107  EEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALL 166
            E  +  A   Y++A  I    P  +  +G    A  +  +A  ++   LE D     A  
Sbjct: 3827 EGSYDAAITEYDRAIAIKPDRPELYRDRGLAYAAIDQYREAIKSYDKALELDTHGADAFS 3886

Query: 167  GQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQL 226
             +       G Y D+LE +++A++  P    +   G G   Y LG+  +A  A+   L+ 
Sbjct: 3887 HKGSSLAELGMYRDALEAFEKAIEKDPELATSW-FGKGNVLYDLGKFTEACAAYDEGLRR 3945

Query: 227  DPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFL 286
            DPEN                    R+GM                LN           H  
Sbjct: 3946 DPENAVGWT---------------RRGM------------SLAGLN----------DHKA 3968

Query: 287  VEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYY 346
              +  + ALA+    P+ S +Y+    ++ + G +E+A   + A    I+   +F+  + 
Sbjct: 3969 AIESYDRALAID---PSFSIAYFTRGSAFEALGQFEEAEASFRAM---ISLQPDFVDAWI 4022

Query: 347  GLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKA 402
              G+   +   ++ ALT+F++ LEI P   E    +G    +LG+ E+AQ    KA
Sbjct: 4023 HQGRALQEQEKYQEALTSFKRALEIDPSRKEIWNDVGSTLDKLGKHEEAQICYEKA 4078



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 102/401 (25%), Positives = 165/401 (41%), Gaps = 56/401 (13%)

Query: 113  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
            A   Y++A  ++   P     KG  L   G  E+A  ++   LE++     AL  +    
Sbjct: 1385 AIDAYDRALEVESSYPEAHYHKGLALYELGRYEEALLSYDQALESNPHLDYALFHRGAAL 1444

Query: 173  FNRGRYSDSLEFYKRALQVHPSCPGAIRL-GIGLCRYKLGQLGKARQAFQRALQLDPENV 231
                RY ++++ +  AL + P    A  L G+ L    L Q   +  A+ RAL+ DP + 
Sbjct: 1445 MKLERYREAVQAFDAALLLLPKYAPAHHLKGVSLAAQGLYQ--DSIYAYDRALECDPGSG 1502

Query: 232  EALV--ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQ 289
            E+ +  A+++ +L  +E A     +    +A EI P  A A  Y        G++    +
Sbjct: 1503 ESALNKAMSLHNLGQDEDA-----LAAAVKAIEIQPDFAEAWRYRGLILSNLGRYQESVE 1557

Query: 290  LTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLG 349
              + ALA     P  +   Y   R++   G YE A   Y A+++   +P + I      G
Sbjct: 1558 ALDHALAGD---PKNARVNYQKGRAFDGLGQYENAISAYDAALQA--QP-DCIPARMHKG 1611

Query: 350  QVQLKLGDFRSALTNFEKVLEIYPDNCE-----------------TLKALGH-------- 384
            +  L +  FR A   F K+L  +PDN E                  ++A  H        
Sbjct: 1612 EALLFISRFRDATKEFGKILTEHPDNAEAWIKMARARFSLGDYTEVIEACDHALRFNADS 1671

Query: 385  ----IY-----VQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDT-GAALDAFKT 434
                +Y      +LG+ E+A E L +A +ID    QA   LG  L+  +  G A+ AF  
Sbjct: 1672 AEALLYRGLAQYELGRYEEAVESLARAEQIDSHLEQAVYHLGAALLKLERYGDAIPAFD- 1730

Query: 435  ARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
             R L  K  +     +    GV    +G +  A  SF++AL
Sbjct: 1731 -RVLSLKPDQATAHHLR---GVALAAQGMYPEAISSFENAL 1767



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 94/437 (21%), Positives = 164/437 (37%), Gaps = 72/437 (16%)

Query: 113  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
            A   ++KA  I+      W+ KG  L   G+  +A+ A+   L+ D D     +      
Sbjct: 1045 AVTAFSKALDINAGIGGIWMHKGDALSTLGKTSEAAEAYAEALKLDPDQEEGWIKGGRAL 1104

Query: 173  FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 232
            F+ GRY D+++ +  A+ ++     A  L  G    K+ + G+A Q F+  L++DP N E
Sbjct: 1105 FDLGRYQDAIDAFDNAIALNQRSTVAF-LYKGFSLEKINRAGEALQVFEVLLEIDPHNSE 1163

Query: 233  ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTE 292
            A   + +             G  + + A   +                           E
Sbjct: 1164 AHYHMGLA----------LAGSGRPKDALAAF---------------------------E 1186

Query: 293  TALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQ 352
            +AL + +   T + ++YN  +     G Y++A     A  + + +   +   +Y  G   
Sbjct: 1187 SALKIRD---TFAPAWYNKGKMLLDLGKYQEA---LAAFDQALEREPAYTEVFYSRGVAL 1240

Query: 353  LKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQA 412
             KLG F  A+  FE+ LE    N       G    +LG+ ++A +   +A   DP +A  
Sbjct: 1241 SKLGRFPEAIEAFERNLEKDTSNAPGYYFKGIALSKLGRYQEALDAFDRALVYDPENALV 1300

Query: 413  FIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQS 470
            +   G  L        L+ F+ A    +K     P   E     G+  +  G +  A + 
Sbjct: 1301 YFQKGRAL------DGLNRFQEAVAAFEKTLALKPRYSEARMRKGISLYNLGRYADAIRD 1354

Query: 471  FKDALGDG-----IWL----TLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELP 521
            F   + +       W      L DS + T  IDA    L           E + ++ E  
Sbjct: 1355 FDRTIAENPHNFHAWYQKGRALFDSGSYTEAIDAYDRAL-----------EVESSYPEAH 1403

Query: 522  WNKVTVLFNLARLLEQI 538
            ++K   L+ L R  E +
Sbjct: 1404 YHKGLALYELGRYEEAL 1420



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 96/413 (23%), Positives = 157/413 (38%), Gaps = 70/413 (16%)

Query: 88  ALGVYYTYL------GKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAK 141
           A+G+Y  Y+      G   ++   ++E    A + ++ A  ID         +G +L   
Sbjct: 542 AIGIYPNYVNAYYNKGIAFSRTGMRKE----ALEAFDHAIAIDPTHTLALYHRGTMLSGL 597

Query: 142 GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 201
           G    A++A+  VL     N  AL  +        R+ D+ E + +A++  P    A  L
Sbjct: 598 GRYADAAAAYDAVLALSPQNTSALYEKGVALMQLSRWKDAAEAFGQAVEQDPGLIDAW-L 656

Query: 202 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 261
             G C   LG+   A  AF R + L P+N +A +   +  +   +     + +  + RA 
Sbjct: 657 AFGTCNANLGKFPDAIAAFDRVIALSPKNTQAFIHKGIALVTTGK---FEEAIAALNRAL 713

Query: 262 EIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDY 321
           E  P    A       +++ G      Q  E A+                 RS+      
Sbjct: 714 EDAPRDERA-------WYYKGMSLAALQRFEEAV-----------------RSFER---- 745

Query: 322 EKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKA 381
                     V EIN+     F  +  G     LG    A+ ++++ LEI PDN  TL  
Sbjct: 746 ----------VLEINRRCSPAF--FQKGNALAHLGKQLEAIISYDQALEIDPDNPVTLYQ 793

Query: 382 LGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKK 441
            G    Q  + + A +   +   ++P +AQA   LG         A    F  A    ++
Sbjct: 794 KGIALAQRERYDDAIKTFERLLTLEPENAQALYYLGIAY------AGRQRFDEAIVAFER 847

Query: 442 AGEEVPIEVLNN--IGVIHFEKGEFESAHQSFKDALGDGIWLTLLD-SKTKTY 491
           + E  P   L +  +GV   E   ++ A +SF +AL       LLD S   TY
Sbjct: 848 SLEIDPKNPLAHHYMGVSLVECDRYDDALRSFSEAL-------LLDASNASTY 893



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 157/700 (22%), Positives = 261/700 (37%), Gaps = 110/700 (15%)

Query: 113  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRD--NVPALLGQAC 170
            A   +++A   D  +P     KG+ LL  GE EQA ++F   L+ D    +    LG A 
Sbjct: 2813 AVAAFSEAIARDDKKPEAQYEKGRALLELGEDEQAVTSFTRALDLDTSFGDAAYYLGLAL 2872

Query: 171  VEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPEN 230
                 G+++D++  Y R +   P    A     G+   +LG+   A QA+++A Q++P N
Sbjct: 2873 ERV--GKFTDAITAYDRMVAARPDHSDAW-YHRGIASERLGRDNDAVQAYEKARQIEPHN 2929

Query: 231  VEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQL 290
            +  L A        +  A  R G       FE            A H F           
Sbjct: 2930 LPLLFA--------DGRAWARLGQ------FED-----------AIHLF----------- 2953

Query: 291  TETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQ 350
             + AL      P      +  A++  + G +++A   +  +  ++   +E   P Y  G 
Sbjct: 2954 -DIALGKE---PGNGEILFEKAKALAALGRHDEAQEIFRLAFTQLTDNYE---PAYLRGL 3006

Query: 351  VQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDA 410
              L L  +  A   F+  L + PD  E  +  G   +  G  E A      A  + P D 
Sbjct: 3007 SLLALERYEDADMAFDAALSLSPDLPEIWEKKGGALMHAGNYEGAVAAFDHAISLLPDDP 3066

Query: 411  QAFIDLG----------ELLISSDTGAALD------AFKTARTLLKKAGEEVPIEVLNNI 454
             A+++ G          E + S D   AL+      +F+  R L   A  E  +E L+  
Sbjct: 3067 GAYLERGRALAALNRNDEAVASFDQVLALEPADPVASFERGRALYYAAKYEHAVEALDTT 3126

Query: 455  --------GVIHFEKGE------FESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASML 500
                    G ++F          +  A +SF+  L     +   ++    Y      + L
Sbjct: 3127 LSSDPRHPGALYFRAASLAALERYAEAAESFERLL-----VYTPENADAWYEQGCVLARL 3181

Query: 501  QFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLIL-FKYQDYV 559
            +  D +    F++  N V         LF  AR L+ +     A   Y   L  K  D  
Sbjct: 3182 RHYD-EAIAAFDHVLNLVP---EHFDALFQKARALDDLGKYSEAVTSYSAALALKPSDAK 3237

Query: 560  DAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAA 619
              Y R  ++A+     + +++  + AL+++  + +AL   G   L    + +A +TF   
Sbjct: 3238 THYYRGVSLAE-NGQPEEAVKAFDAALEIDPVFSDALFAKGKALLTLGMFREAVKTF--- 3293

Query: 620  SDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAAN 679
             D T          L   NY A +   K     E    ++A   + + I     N  A  
Sbjct: 3294 -DKT---------LLIEKNY-AGVYFHKGLALAELGRHDEAITAFDKDIDLDAGNNDAFY 3342

Query: 680  GAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQN 739
              GV LA  G+   + + F  V +A  GSV       W++     F  G F  A+  Y+ 
Sbjct: 3343 HKGVSLAATGKLTNAMEAFDHVIQADPGSV-----QGWLHRGMALFDLGRFNDAISSYKK 3397

Query: 740  CLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHL 779
             L     N DA  L  + R++Y    + +   +  RA+ L
Sbjct: 3398 ALEIGPTNADAWYL--VGRSYYALNTYDEAIAAFDRALDL 3435



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 146/718 (20%), Positives = 266/718 (37%), Gaps = 92/718 (12%)

Query: 118  NKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGR 177
            N+A      +   W  KG  L A    E+A  +F+ VLE +R   PA   +     + G+
Sbjct: 710  NRALEDAPRDERAWYYKGMSLAALQRFEEAVRSFERVLEINRRCSPAFFQKGNALAHLGK 769

Query: 178  YSDSLEFYKRALQVHPSCPGAI-RLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVA 236
              +++  Y +AL++ P  P  + + GI L + +  +   A + F+R L L+PEN +AL  
Sbjct: 770  QLEAIISYDQALEIDPDNPVTLYQKGIALAQRE--RYDDAIKTFERLLTLEPENAQALYY 827

Query: 237  LAVMDLQANEAAGIRKGMEKM---QRAFEIYPYCAMALNYL------------------- 274
            L +        AG ++  E +   +R+ EI P   +A +Y+                   
Sbjct: 828  LGIA------YAGRQRFDEAIVAFERSLEIDPKNPLAHHYMGVSLVECDRYDDALRSFSE 881

Query: 275  --------ANHFFFTGQHFLVEQLTETALAVTNHG----PTKSHSYYNLARSYHSKGDYE 322
                    A+ +++ G  FL     E A+A  N       + S ++  L  S    G ++
Sbjct: 882  ALLLDASNASTYYYQGIAFLQSHQYEEAIAALNTAIRMDTSLSDAFTYLGISLARLGRHD 941

Query: 323  KAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKAL 382
            +A      S+       E +      G+  + L  +  A+  F+++L + P+        
Sbjct: 942  EAVAALNRSLAANPSQMEALV---CRGESLMVLQRYADAVETFDRILSLNPNVISAWMQK 998

Query: 383  GHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKK 441
            G    +L + + A  +  +  +I+P +A A+   G LL     T  A+ AF  A      
Sbjct: 999  GAALERLVKKQDALAVYTRVLEINPGNADAWARKGVLLQDLGRTAEAVTAFSKA------ 1052

Query: 442  AGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQ 501
                  +++   IG I   KG+  S      +A         LD   +   I    ++  
Sbjct: 1053 ------LDINAGIGGIWMHKGDALSTLGKTSEAAEAYAEALKLDPDQEEGWIKGGRALFD 1106

Query: 502  FKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDA 561
                Q     +   N + L              LE+I+    A  ++ ++L       +A
Sbjct: 1107 LGRYQ--DAIDAFDNAIALNQRSTVAFLYKGFSLEKINRAGEALQVFEVLLEIDPHNSEA 1164

Query: 562  YLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASD 621
            +  +          + ++     ALK+   +  A    G + L   D  K +E   A   
Sbjct: 1165 HYHMGLALAGSGRPKDALAAFESALKIRDTFAPAWYNKGKMLL---DLGKYQEALAAFDQ 1221

Query: 622  ATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGA 681
            A + + +Y  +    ++   AL    R P+        A E + R + + TSN       
Sbjct: 1222 ALEREPAYTEVF---YSRGVALSKLGRFPE--------AIEAFERNLEKDTSNAPGYYFK 1270

Query: 682  GVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCL 741
            G+ L++ G++  + D F +          V  P+     A VYF +G     +  +Q  +
Sbjct: 1271 GIALSKLGRYQEALDAFDR--------ALVYDPEN----ALVYFQKGRALDGLNRFQEAV 1318

Query: 742  RKFYYNTDAQILLYLARTH-----YEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAM 794
              F      +     AR       Y   ++ D  +   R I   P N+   +  G A+
Sbjct: 1319 AAFEKTLALKPRYSEARMRKGISLYNLGRYADAIRDFDRTIAENPHNFHAWYQKGRAL 1376



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 72/319 (22%), Positives = 123/319 (38%), Gaps = 38/319 (11%)

Query: 130  TWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRAL 189
             W+   +   + G+  +   A    L  + D+  ALL +   ++  GRY +++E   RA 
Sbjct: 1640 AWIKMARARFSLGDYTEVIEACDHALRFNADSAEALLYRGLAQYELGRYEEAVESLARAE 1699

Query: 190  QVHPSCPGAI-RLGIGLCRYKLGQLGKARQAFQRALQLDPENVEAL----VALAVMDLQA 244
            Q+      A+  LG  L   KL + G A  AF R L L P+   A     VALA   +  
Sbjct: 1700 QIDSHLEQAVYHLGAALL--KLERYGDAIPAFDRVLSLKPDQATAHHLRGVALAAQGMYP 1757

Query: 245  NEAAGIRKGMEKMQRAFEIYPYCAMALNYL--------------------ANHFFFTGQH 284
               +     +    R+ E     A+AL+ L                    A  +++ G  
Sbjct: 1758 EAISSFENALRYDPRSAESALNKAIALHSLGRDEESILASDIALGIQPDFAEAWYYKG-- 1815

Query: 285  FLVEQLTETALAVTNHG------PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKP 338
              +E L   A AV           T +H+++ +         YE+A   +   +  ++  
Sbjct: 1816 VALETLKRYADAVPAFSRSLELDSTTTHAWFEMGLCLVELQRYEEAAGAFDHVLGLVS-- 1873

Query: 339  HEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQEL 398
             ++   Y+  G+    LG +  A+  F+  L I P +   L A GH    L +  +A   
Sbjct: 1874 -DYPPAYFHKGRALALLGKYEEAVVAFDSALAITPGDAIVLSAKGHALESLKKYREAAAA 1932

Query: 399  LRKAAKIDPRDAQAFIDLG 417
              +A  ++P  A  +  LG
Sbjct: 1933 FEEATSVNPAAADDYYHLG 1951



 Score = 49.7 bits (117), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 54/224 (24%), Positives = 96/224 (42%), Gaps = 24/224 (10%)

Query: 159 RDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQ 218
           R +  AL+ Q    ++ GR+ +++  + RAL + P  P A     G+  Y LG+   A  
Sbjct: 3   RSDAEALMRQGTELYDLGRHQEAVVMFDRALTLFPKLPKAHYFK-GIALYDLGRYEDALD 61

Query: 219 AFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYC--AMALNY-LA 275
           ++  AL LDP ++ +           N+AA     + ++ R  E    C   +AL +  A
Sbjct: 62  SYDHALALDPSDINSWY---------NKAA----TLAQIGRNKEALDACDRLIALRFDNA 108

Query: 276 NHFFFTGQHFLVEQLTETALAVTNHG----PTKSHSYYNLARSYHSKGDYEKAGLYYMAS 331
             +   G           A++  +H     PT +  YYN   +    G +++A   Y  +
Sbjct: 109 EAWILKGISLYELGRFRDAISAYDHALAIDPTYAKVYYNKGIALADLGRHDEAIAAYGKA 168

Query: 332 VKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDN 375
           V  +    E+   YY +G    ++G +  AL  FEK  ++ P +
Sbjct: 169 VGIVP---EYAKAYYNMGISLYEIGRYDEALGAFEKAHDLDPSD 209



 Score = 46.6 bits (109), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 62/314 (19%), Positives = 123/314 (39%), Gaps = 38/314 (12%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
           A   Y+ A  +D  + ++W  K   L   G  ++A  A   ++    DN  A + +    
Sbjct: 59  ALDSYDHALALDPSDINSWYNKAATLAQIGRNKEALDACDRLIALRFDNAEAWILKGISL 118

Query: 173 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 232
           +  GR+ D++  Y  AL + P+    +    G+    LG+  +A  A+ +A+ + PE  +
Sbjct: 119 YELGRFRDAISAYDHALAIDPTY-AKVYYNKGIALADLGRHDEAIAAYGKAVGIVPEYAK 177

Query: 233 ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTE 292
           A      M +   E     + +   ++A ++ P       Y A   F   +     Q  E
Sbjct: 178 AYYN---MGISLYEIGRYDEALGAFEKAHDLDPSDPWVWYYRA---FILAKQERYAQAAE 231

Query: 293 TALAVTNHGPTKSH-------SYYNLARSYHSKGDYEK----------AGLYYMASVKEI 335
            A    +  P  +        S Y L R   +   +++          A LY   S+ ++
Sbjct: 232 AAGVFLSFEPEHADIWVIQGISLYRLRRLDEAADAFDRAIEQDPLAPDAWLYKGFSLFDM 291

Query: 336 NKPHEFIFP--------------YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKA 381
            +  +  +               YY  G+   +LG +R A+ +F++ L   P+N + L +
Sbjct: 292 ERYEDATYALDKAAELSPQTTKIYYTRGKANQRLGKYREAVADFDRALAAEPENADALYS 351

Query: 382 LGHIYVQLGQIEKA 395
            G   + L + +++
Sbjct: 352 RGVSCIHLSRYDES 365



 Score = 46.2 bits (108), Expect = 0.092,   Method: Compositional matrix adjust.
 Identities = 78/339 (23%), Positives = 129/339 (38%), Gaps = 74/339 (21%)

Query: 113  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
            A + +  AS ID      ++ KG  L    + ++A +AF   L  D  NVPAL  +    
Sbjct: 2677 AIEAFEMASAIDPEFAVAYLEKGLALARLSKNKEAVAAFDATLALDPANVPALFNKGLAL 2736

Query: 173  FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDP---- 228
             N  +++D++  +  AL++      A     G  + +L     A  AF  AL +DP    
Sbjct: 2737 ANLKKFADAITVFDAALRIDAKHYEAW-FAKGYAQSRLRHYDDAVGAFDHALAIDPGRYA 2795

Query: 229  -------------ENVEALVAL-------------------AVMDLQANEAAGIRKGMEK 256
                         +N EA+ A                    A+++L  +E A     +  
Sbjct: 2796 VWYEKGVALARAGKNDEAVAAFSEAIARDDKKPEAQYEKGRALLELGEDEQA-----VTS 2850

Query: 257  MQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG------PTKSHSYYN 310
              RA ++      A  YL            +E++ +   A+T +       P  S ++Y+
Sbjct: 2851 FTRALDLDTSFGDAAYYLG---------LALERVGKFTDAITAYDRMVAARPDHSDAWYH 2901

Query: 311  -------LARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALT 363
                   L R   +   YEKA        ++I +PH      +  G+   +LG F  A+ 
Sbjct: 2902 RGIASERLGRDNDAVQAYEKA--------RQI-EPHNLPL-LFADGRAWARLGQFEDAIH 2951

Query: 364  NFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKA 402
             F+  L   P N E L         LG+ ++AQE+ R A
Sbjct: 2952 LFDIALGKEPGNGEILFEKAKALAALGRHDEAQEIFRLA 2990



 Score = 45.4 bits (106), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 112/501 (22%), Positives = 182/501 (36%), Gaps = 57/501 (11%)

Query: 130  TWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRAL 189
             W  +G +L      ++A +AF  VL    ++  AL  +A    + G+YS+++  Y  AL
Sbjct: 3170 AWYEQGCVLARLRHYDEAIAAFDHVLNLVPEHFDALFQKARALDDLGKYSEAVTSYSAAL 3229

Query: 190  QVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAG 249
             + PS         G+   + GQ  +A +AF  AL++DP   +AL         A   A 
Sbjct: 3230 ALKPS-DAKTHYYRGVSLAENGQPEEAVKAFDAALEIDPVFSDALF--------AKGKAL 3280

Query: 250  IRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYY 309
            +  GM   + A + +    +     A  +F  G    + +L     A+T           
Sbjct: 3281 LTLGM--FREAVKTFDKTLLIEKNYAGVYFHKG--LALAELGRHDEAITAFDKDIDLDAG 3336

Query: 310  NLARSYHSKGDYEKAGLYYMASVKEINKPHEF----------IFPYYGLGQVQLKLGDFR 359
            N    YH        G+   A+ K  N    F          +  +   G     LG F 
Sbjct: 3337 NNDAFYHK-------GVSLAATGKLTNAMEAFDHVIQADPGSVQGWLHRGMALFDLGRFN 3389

Query: 360  SALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGEL 419
             A+++++K LEI P N +    +G  Y  L   ++A     +A  +    A+A+   G  
Sbjct: 3390 DAISSYKKALEIGPTNADAWYLVGRSYYALNTYDEAIAAFDRALDLQGEFAEAWYYKGRT 3449

Query: 420  LIS-SDTGAALDAFKTARTL-----------------LKKAGEEVP-----IEVLNNIGV 456
            L +    G A+ A+ +   L                 L++AG+ V      + +  N   
Sbjct: 3450 LFAMGKYGEAVSAYDSTLVLRPKHDEAFYHKGMALLKLQRAGDAVSAFDQALRLRPNFSY 3509

Query: 457  IHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQ-LFHRFENDG 515
            I   KG   +A    KDA+        LD K       A  S L     Q     FE   
Sbjct: 3510 IWTGKGMALAALDRHKDAISCYTKAIALDRKDSRAYYQAGLSYLSLGRYQDAIRNFE--A 3567

Query: 516  NHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNL 575
              V+ P +     +   R L  +     A   +   L +  DY +A+L            
Sbjct: 3568 TLVQHP-SCARAFYAKGRALCGVSMFHEAITSFDKALSEQSDYPEAWLYRGIAEANLEEF 3626

Query: 576  QLSIELVNEALKVNGKYPNAL 596
            + +++  N AL  N  Y  AL
Sbjct: 3627 EEALDCYNHALAQNESYATAL 3647



 Score = 45.4 bits (106), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 92/398 (23%), Positives = 160/398 (40%), Gaps = 58/398 (14%)

Query: 81   ERIAILN-------ALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVG 133
            E IA LN       +L   +TYLG    +    +E    A    N++   +  +    V 
Sbjct: 908  EAIAALNTAIRMDTSLSDAFTYLGISLARLGRHDE----AVAALNRSLAANPSQMEALVC 963

Query: 134  KGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHP 193
            +G+ L+       A   F  +L  + + + A + +        +  D+L  Y R L+++P
Sbjct: 964  RGESLMVLQRYADAVETFDRILSLNPNVISAWMQKGAALERLVKKQDALAVYTRVLEINP 1023

Query: 194  SCPGA-IRLGIGLCRYKLGQLGKARQAFQRALQLDP-------ENVEALVALA------- 238
                A  R G+ L    LG+  +A  AF +AL ++           +AL  L        
Sbjct: 1024 GNADAWARKGVLLQ--DLGRTAEAVTAFSKALDINAGIGGIWMHKGDALSTLGKTSEAAE 1081

Query: 239  ----VMDLQANEAAGIRKG------MEKMQRAFEIYPYCAMALNYLAN-HFFFTGQHFLV 287
                 + L  ++  G  KG      + + Q A + +   A+ALN  +   F + G  F +
Sbjct: 1082 AYAEALKLDPDQEEGWIKGGRALFDLGRYQDAIDAFD-NAIALNQRSTVAFLYKG--FSL 1138

Query: 288  EQLTETALAVT------NHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEF 341
            E++     A+          P  S ++Y++  +    G  + A    +A+ +   K  + 
Sbjct: 1139 EKINRAGEALQVFEVLLEIDPHNSEAHYHMGLALAGSGRPKDA----LAAFESALKIRDT 1194

Query: 342  IFP-YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLR 400
              P +Y  G++ L LG ++ AL  F++ LE  P   E   + G    +LG+  +A E   
Sbjct: 1195 FAPAWYNKGKMLLDLGKYQEALAAFDQALEREPAYTEVFYSRGVALSKLGRFPEAIEAFE 1254

Query: 401  KAAKIDPRDAQAFIDLGELLISSDTG---AALDAFKTA 435
            +  + D  +A  +   G  L  S  G    ALDAF  A
Sbjct: 1255 RNLEKDTSNAPGYYFKGIAL--SKLGRYQEALDAFDRA 1290



 Score = 45.1 bits (105), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 70/298 (23%), Positives = 119/298 (39%), Gaps = 32/298 (10%)

Query: 134  KGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHP 193
            KG+  +     + A  +F   LE +     A   +A   ++ G Y  ++  Y RA+ + P
Sbjct: 3786 KGRTYITLQNPDGAIRSFDRALEVNPSCFQAHYWKARTLYDEGSYDAAITEYDRAIAIKP 3845

Query: 194  SCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV----ALAVMDLQANEAAG 249
              P   R   GL    + Q  +A +++ +AL+LD    +A      +LA + +       
Sbjct: 3846 DRPELYR-DRGLAYAAIDQYREAIKSYDKALELDTHGADAFSHKGSSLAELGM------- 3897

Query: 250  IRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG----PTKS 305
             R  +E  ++A E  P  A +     N  +  G+       TE A A  + G    P  +
Sbjct: 3898 YRDALEAFEKAIEKDPELATSWFGKGNVLYDLGK------FTE-ACAAYDEGLRRDPENA 3950

Query: 306  HSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNF 365
              +     S     D++ A   Y    + +     F   Y+  G     LG F  A  +F
Sbjct: 3951 VGWTRRGMSLAGLNDHKAAIESY---DRALAIDPSFSIAYFTRGSAFEALGQFEEAEASF 4007

Query: 366  EKVLEIYPDNCETLKALGHIYVQLGQIEKAQELL---RKAAKIDPRDAQAFIDLGELL 420
              ++ + PD  +   A  H    L + EK QE L   ++A +IDP   + + D+G  L
Sbjct: 4008 RAMISLQPDFVD---AWIHQGRALQEQEKYQEALTSFKRALEIDPSRKEIWNDVGSTL 4062



 Score = 45.1 bits (105), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 68/296 (22%), Positives = 110/296 (37%), Gaps = 59/296 (19%)

Query: 134  KGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHP 193
            KG  L   G    A   F   +  +  N  A   +    F+ G Y+++++ Y RAL+V  
Sbjct: 1338 KGISLYNLGRYADAIRDFDRTIAENPHNFHAWYQKGRALFDSGSYTEAIDAYDRALEVES 1397

Query: 194  SCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKG 253
            S P A     GL  Y+LG+  +A  ++ +AL+ +P    AL          +  A + K 
Sbjct: 1398 SYPEA-HYHKGLALYELGRYEEALLSYDQALESNPHLDYALF---------HRGAALMK- 1446

Query: 254  MEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG----PTKSHSYY 309
            +E+ + A + +    + L   A      G     + L + ++   +      P    S  
Sbjct: 1447 LERYREAVQAFDAALLLLPKYAPAHHLKGVSLAAQGLYQDSIYAYDRALECDPGSGESAL 1506

Query: 310  NLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVL 369
            N A S H+                                     LG    AL    K +
Sbjct: 1507 NKAMSLHN-------------------------------------LGQDEDALAAAVKAI 1529

Query: 370  EIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDA-------QAFIDLGE 418
            EI PD  E  +  G I   LG+ +++ E L  A   DP++A       +AF  LG+
Sbjct: 1530 EIQPDFAEAWRYRGLILSNLGRYQESVEALDHALAGDPKNARVNYQKGRAFDGLGQ 1585



 Score = 44.7 bits (104), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 94/428 (21%), Positives = 152/428 (35%), Gaps = 81/428 (18%)

Query: 113  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
            A   Y+ A  ++   P     KG  LL       A  AF   ++    +  A   +    
Sbjct: 2371 AIHAYDLALSLESAYPEGSFKKGLALLRLKNYNGAIEAFDAAIQFVPGHAQAHYHKGLAL 2430

Query: 173  FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 232
            F  G+   ++  +  AL+  PS   A+    GL    L +   A  AF + L+  P+N E
Sbjct: 2431 FALGKNEKAIRSFTHALEHDPSLSDAL-FHTGLAYAALSRYSPALSAFDKLLESGPQNAE 2489

Query: 233  ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMAL---NYLANHFFFTGQHFLVEQ 289
            AL     M             + K+ R  E       +L   N +A+ +   G   L ++
Sbjct: 2490 ALFQKGRM-------------LAKLGRPDEALAVLETSLGLENNIADVWLLKGSVLLEQE 2536

Query: 290  LTETALAVTNHG----PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 345
              E AL V +      P  + ++Y   +++     Y +A   +   V       +    +
Sbjct: 2537 RLEDALEVFDRALALTPENNAAWYRKGKAFSGLHRYPEAIQCFDRVVTSDTGCAQ---AW 2593

Query: 346  YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCE-------TLKALGH-------------- 384
            +  G   L  GD R+A+    K LE+ PDN          L  LG               
Sbjct: 2594 FRKGSALLSNGDLRAAIEALTKALELKPDNANGWYDRAVALAGLGRYEESIPSYDRALSL 2653

Query: 385  -------------IYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG----------ELLI 421
                            +LG+  +A E    A+ IDP  A A+++ G          E + 
Sbjct: 2654 NPKYTSAYFDKGSALSRLGRDRQAIEAFEMASAIDPEFAVAYLEKGLALARLSKNKEAVA 2713

Query: 422  SSDTGAALDA------FKTARTL--LKKAGEEVPI-EVLNNIGVIHFE----KGEFESAH 468
            + D   ALD       F     L  LKK  + + + +    I   H+E    KG  +S  
Sbjct: 2714 AFDATLALDPANVPALFNKGLALANLKKFADAITVFDAALRIDAKHYEAWFAKGYAQSRL 2773

Query: 469  QSFKDALG 476
            + + DA+G
Sbjct: 2774 RHYDDAVG 2781



 Score = 40.0 bits (92), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 47/172 (27%), Positives = 75/172 (43%), Gaps = 38/172 (22%)

Query: 707  GSVFVQMPD---VWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTD-AQILLYLARTHYE 762
            G +  + PD    WI +A   F+ G++   ++   + LR   +N D A+ LLY     YE
Sbjct: 1628 GKILTEHPDNAEAWIKMARARFSLGDYTEVIEACDHALR---FNADSAEALLYRGLAQYE 1684

Query: 763  AEQWQDCKKSLLRA----IHLAPSNYTL--------RFDAGVAMQKFS-ASTLQKTRRTA 809
              ++++  +SL RA     HL  + Y L        R+  G A+  F    +L+  + TA
Sbjct: 1685 LGRYEEAVESLARAEQIDSHLEQAVYHLGAALLKLERY--GDAIPAFDRVLSLKPDQATA 1742

Query: 810  DEVRST-----------VAELENAVR-----VFSHLSAASNLHLHGFDEKKI 845
              +R             ++  ENA+R       S L+ A  LH  G DE+ I
Sbjct: 1743 HHLRGVALAAQGMYPEAISSFENALRYDPRSAESALNKAIALHSLGRDEESI 1794



 Score = 39.3 bits (90), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 62/316 (19%), Positives = 128/316 (40%), Gaps = 14/316 (4%)

Query: 113  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPA--LLGQAC 170
            A   +++A  +D +     V KGQ     G+ E+A + F  V+  D +NV A  ++G A 
Sbjct: 2031 AIASFDRALALDANHIGALVKKGQSRANLGQYEEAVTLFDRVITLDPENVIAHFVMGTAL 2090

Query: 171  VEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPEN 230
                  RY D++    RAL+ +      I    G   Y+LG+  ++ ++F +A + +P++
Sbjct: 2091 ARL--ARYEDAVVALDRALE-YDGNNARIYACKGYSLYRLGRFKESAESFAKAQKREPKD 2147

Query: 231  VEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQL 290
              +L       L   +     +G+    +   I P  A A  Y    +     H   ++ 
Sbjct: 2148 PFSLRFRGKSLLHNGK---WEEGIAIFDKLLGIEPKSADAWYYKGIAYSHLSLHDEAQES 2204

Query: 291  TETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQ 350
             E AL +     T   ++Y        +  +E++   +  + +      ++ F       
Sbjct: 2205 FEQALTIDGECAT---AWYQKGLVLFERERFEESLPAFERAAELAPSVQDYAFRN---AL 2258

Query: 351  VQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDA 410
                L  +  A++ F++ L + P+        G    ++     A + L +A  +DP ++
Sbjct: 2259 CLFMLERYPEAISAFDRALTLGPETAVIQYYRGRALAEMRDYGVALDALNRAIGLDPENS 2318

Query: 411  QAFIDLGELLISSDTG 426
              ++  G +L++   G
Sbjct: 2319 FTWLAKGSVLLAQKDG 2334


>gi|440680211|ref|YP_007155006.1| Tetratricopeptide TPR_1 repeat-containing protein [Anabaena
           cylindrica PCC 7122]
 gi|428677330|gb|AFZ56096.1| Tetratricopeptide TPR_1 repeat-containing protein [Anabaena
           cylindrica PCC 7122]
          Length = 560

 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 79/315 (25%), Positives = 133/315 (42%), Gaps = 28/315 (8%)

Query: 167 GQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQL 226
           G AC +   G    ++E+Y +AL ++P+   A     G  R KLG +  A + + +AL +
Sbjct: 105 GNACAQ--SGDMKAAMEYYSQALSINPNFAEAY-CNRGNARSKLGDMKGAMEDYNQALSI 161

Query: 227 DPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFL 286
           +P +VEA ++     LQ+ +  G   GME   +A  I P  A A     N     G    
Sbjct: 162 NPNSVEAYLSRGFARLQSGDMNG---GMEDYNQAISINPNLAEAYCNRGNARCEAGD--- 215

Query: 287 VEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFP-- 344
           V+   E         P  + +Y N + +    GD E A       +++ N+    I P  
Sbjct: 216 VQGAIEDCNQALRINPKLAEAYCNRSNARCESGDVEGA-------IEDCNQALR-INPKL 267

Query: 345 ---YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRK 401
              Y   G  + + GD + A+ ++ + L I P+  +  +  G    + G  + A E   +
Sbjct: 268 AEAYLNRGNARRESGDIKRAIEDYNQGLRINPNLAQAYRNRGFARCESGDFKGAIEDFNQ 327

Query: 402 AAKIDPRDAQAFIDLG-ELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFE 460
           A +I+P  AQA+ + G     S D   A++ F  A  +          E   N G+ H  
Sbjct: 328 AIRINPNLAQAYQNRGFARCESGDFKGAIEDFNQALRINPNYA-----EAYYNRGLAHNY 382

Query: 461 KGEFESAHQSFKDAL 475
            G+ ++  + F  AL
Sbjct: 383 SGDRQAEIEDFNQAL 397



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 78/331 (23%), Positives = 136/331 (41%), Gaps = 13/331 (3%)

Query: 118 NKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGR 177
           N+A RI+      +  +       G+VE A       L  +     A L +       G 
Sbjct: 224 NQALRINPKLAEAYCNRSNARCESGDVEGAIEDCNQALRINPKLAEAYLNRGNARRESGD 283

Query: 178 YSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVAL 237
              ++E Y + L+++P+   A R   G  R + G    A + F +A++++P   +A    
Sbjct: 284 IKRAIEDYNQGLRINPNLAQAYR-NRGFARCESGDFKGAIEDFNQAIRINPNLAQAYQNR 342

Query: 238 AVMDLQANEAAGIRKGMEKMQRAFEIYP-YCAMALNYLANHFFFTGQHFLVEQLTETALA 296
                   E+   +  +E   +A  I P Y     N    H +   +   +E   + AL 
Sbjct: 343 GFARC---ESGDFKGAIEDFNQALRINPNYAEAYYNRGLAHNYSGDRQAEIEDFNQ-ALR 398

Query: 297 VTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLG 356
           +    P  + +Y N   +    GD + A   Y  ++  IN P+     Y   G  + K G
Sbjct: 399 IN---PNLAEAYLNRGVTRRESGDVKGAIEDYNQAL-HIN-PN-LAEAYQNRGFARCKSG 452

Query: 357 DFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDL 416
           DF+ A+ +  +VL I P+  E     G+  ++ G ++ A E   +A +I+P  A A+ + 
Sbjct: 453 DFKGAIEDCNQVLRINPNFAEAYLNRGNARLESGDMKGAIEDCNQALRINPNLAIAYFNR 512

Query: 417 GEL-LISSDTGAALDAFKTARTLLKKAGEEV 446
           G   L S D   A+   + A  L ++ GE V
Sbjct: 513 GAARLQSRDKKGAIADLQKASKLFQQQGEIV 543



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 73/367 (19%), Positives = 143/367 (38%), Gaps = 33/367 (8%)

Query: 117 YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 176
           YN+A  I+ +    +  +G      G+V+ A       L  +     A   ++      G
Sbjct: 189 YNQAISINPNLAEAYCNRGNARCEAGDVQGAIEDCNQALRINPKLAEAYCNRSNARCESG 248

Query: 177 RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVA 236
               ++E   +AL+++P    A  L  G  R + G + +A + + + L+++P   +A   
Sbjct: 249 DVEGAIEDCNQALRINPKLAEAY-LNRGNARRESGDIKRAIEDYNQGLRINPNLAQAYRN 307

Query: 237 LAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALA 296
                    E+   +  +E   +A  I P  A A     N  F   +    +   E    
Sbjct: 308 RGFARC---ESGDFKGAIEDFNQAIRINPNLAQA---YQNRGFARCESGDFKGAIEDFNQ 361

Query: 297 VTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFP-----YYGLGQV 351
                P  + +YYN   +++  GD +       A +++ N+    I P     Y   G  
Sbjct: 362 ALRINPNYAEAYYNRGLAHNYSGDRQ-------AEIEDFNQALR-INPNLAEAYLNRGVT 413

Query: 352 QLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQ 411
           + + GD + A+ ++ + L I P+  E  +  G    + G  + A E   +  +I+P  A+
Sbjct: 414 RRESGDVKGAIEDYNQALHINPNLAEAYQNRGFARCKSGDFKGAIEDCNQVLRINPNFAE 473

Query: 412 AFIDLGEL-LISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQS 470
           A+++ G   L S D   A++    A            + +  N+ + +F +G      + 
Sbjct: 474 AYLNRGNARLESGDMKGAIEDCNQA------------LRINPNLAIAYFNRGAARLQSRD 521

Query: 471 FKDALGD 477
            K A+ D
Sbjct: 522 KKGAIAD 528



 Score = 43.9 bits (102), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 49/216 (22%), Positives = 83/216 (38%), Gaps = 20/216 (9%)

Query: 265 PYCA-MALNYLANHFFFT---GQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGD 320
           P C    LN+    F  T   G+  ++  + E      ++   K+    + + S H  G 
Sbjct: 27  PKCKKFTLNWTYQEFIVTTIRGKQRVIRFIQECKNCSDHNKDEKAIPVTSKSSSVHEDGG 86

Query: 321 YEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLK 380
                L     VKE  K       YY  G    + GD ++A+  + + L I P+  E   
Sbjct: 87  NTPGEL---GDVKEAIK-------YYNQGNACAQSGDMKAAMEYYSQALSINPNFAEAYC 136

Query: 381 ALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG-ELLISSDTGAALDAFKTARTLL 439
             G+   +LG ++ A E   +A  I+P   +A++  G   L S D    ++ +  A ++ 
Sbjct: 137 NRGNARSKLGDMKGAMEDYNQALSINPNSVEAYLSRGFARLQSGDMNGGMEDYNQAISIN 196

Query: 440 KKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
                    E   N G    E G+ + A +    AL
Sbjct: 197 PNLA-----EAYCNRGNARCEAGDVQGAIEDCNQAL 227


>gi|82702040|ref|YP_411606.1| hypothetical protein Nmul_A0911 [Nitrosospira multiformis ATCC
           25196]
 gi|82410105|gb|ABB74214.1| Tetratricopeptide TPR_4 [Nitrosospira multiformis ATCC 25196]
          Length = 875

 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 101/213 (47%), Gaps = 9/213 (4%)

Query: 208 YKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYC 267
           +K G L +A   +Q  LQLDP + +AL  L ++   A +A  I  G+E ++RA    P  
Sbjct: 54  HKRGNLSQAEAIYQHILQLDPNHPDALHFLGLL---ARDAGRIDIGIELIKRALRFKPNY 110

Query: 268 AMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLY 327
             A N L N     G+  L + +     AV    P  + +Y NL  +   +G  + A + 
Sbjct: 111 VEAHNNLGNTLRQQGK--LNDAIASYRTAVKLE-PRFAEAYGNLGNALREQGRLDDAMIN 167

Query: 328 YMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYV 387
           Y    K +    +    +  +G V  + GD  +A+++F K L + PD+ E    LG++ V
Sbjct: 168 YR---KALGIQPQLAEMHCNIGIVHREQGDLENAVSSFRKALLLKPDSAEAFNNLGNVLV 224

Query: 388 QLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 420
           + G+ E+A     KA    P+  +AF +LG  L
Sbjct: 225 EQGKFEEAVSSFGKAILYKPQFPEAFNNLGNAL 257



 Score = 52.8 bits (125), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 62/268 (23%), Positives = 116/268 (43%), Gaps = 10/268 (3%)

Query: 146 QASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGL 205
           +A+ A  +   + R ++   L  A     RG  S +   Y+  LQ+ P+ P A+   +GL
Sbjct: 27  EANPAASLADTSPRQSILQYLQAAVEHHKRGNLSQAEAIYQHILQLDPNHPDALHF-LGL 85

Query: 206 CRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYP 265
                G++    +  +RAL+  P  VEA   L     Q  +   +   +   + A ++ P
Sbjct: 86  LARDAGRIDIGIELIKRALRFKPNYVEAHNNLGNTLRQQGK---LNDAIASYRTAVKLEP 142

Query: 266 YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAG 325
             A A   L N     G+          AL +    P  +  + N+   +  +GD E A 
Sbjct: 143 RFAEAYGNLGNALREQGRLDDAMINYRKALGIQ---PQLAEMHCNIGIVHREQGDLENAV 199

Query: 326 LYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 385
             +  ++  + KP +    +  LG V ++ G F  A+++F K +   P   E    LG+ 
Sbjct: 200 SSFRKAL--LLKP-DSAEAFNNLGNVLVEQGKFEEAVSSFGKAILYKPQFPEAFNNLGNA 256

Query: 386 YVQLGQIEKAQELLRKAAKIDPRDAQAF 413
             +LG++++A     +A +++P  A+A+
Sbjct: 257 LRELGRLDEAAVAYGRAIELNPGYARAY 284



 Score = 45.4 bits (106), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 4/139 (2%)

Query: 338 PHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQE 397
           P + I  Y        K G+   A   ++ +L++ P++ + L  LG +    G+I+   E
Sbjct: 39  PRQSILQYLQAAVEHHKRGNLSQAEAIYQHILQLDPNHPDALHFLGLLARDAGRIDIGIE 98

Query: 398 LLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVI 457
           L+++A +  P   +A  +LG  L     G   DA  + RT +K   E    E   N+G  
Sbjct: 99  LIKRALRFKPNYVEAHNNLGNTL--RQQGKLNDAIASYRTAVKL--EPRFAEAYGNLGNA 154

Query: 458 HFEKGEFESAHQSFKDALG 476
             E+G  + A  +++ ALG
Sbjct: 155 LREQGRLDDAMINYRKALG 173


>gi|186681165|ref|YP_001864361.1| hypothetical protein Npun_R0666 [Nostoc punctiforme PCC 73102]
 gi|186463617|gb|ACC79418.1| TPR repeat-containing protein [Nostoc punctiforme PCC 73102]
          Length = 532

 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 76/336 (22%), Positives = 138/336 (41%), Gaps = 65/336 (19%)

Query: 87  NALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQ 146
           NALGV     GK+             A   Y KA +ID +  +     G+ L  +G++ +
Sbjct: 204 NALGVVLHTQGKLSE-----------AIAAYQKALQIDPNYVNAHCNLGKALHTQGKLSE 252

Query: 147 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 206
           A +A++  L  D ++            ++G+ S+++  Y++ALQ+ P+   A    +G  
Sbjct: 253 AMAAYQRALRLDPNDADTHCNLGIALHDQGKLSEAIAAYQKALQIDPNYVNA-HCNLGKA 311

Query: 207 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY 266
            +  G+L +A  A+QRAL++DP    A   L V      +   + + +   Q+A +I P 
Sbjct: 312 LHTQGKLSEAMAAYQRALRVDPNYASAHCNLGVTLYHQGK---LSEAIAAYQKALQIDP- 367

Query: 267 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGL 326
                NY+  H                                NL ++ H++G   +A  
Sbjct: 368 -----NYVNAHC-------------------------------NLGKALHTQGKLSEAMA 391

Query: 327 YYMASVKEINKPHEFIFPYYGLGQVQLKL-----GDFRSALTNFEKVLEIYPDNCETLKA 381
            Y  +++        + P Y      L +     G    A+  +++ L + P++ +T   
Sbjct: 392 AYQRALR--------VDPNYASAHCNLGVTLYHQGKLSEAIAAYQRALRLDPNDADTHCN 443

Query: 382 LGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 417
           LG      G++ +A    ++A  IDP DA A  +LG
Sbjct: 444 LGIALHDQGKLSEAIAAYQRALLIDPNDADAHCNLG 479



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 63/275 (22%), Positives = 122/275 (44%), Gaps = 10/275 (3%)

Query: 143 EVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLG 202
           ++E+A   +K  L  D ++V A      V   +G+ S+++  Y++ALQ+ P+   A    
Sbjct: 181 KLEEAVVKYKAALSLDPNSVYAHNALGVVLHTQGKLSEAIAAYQKALQIDPNYVNA-HCN 239

Query: 203 IGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFE 262
           +G   +  G+L +A  A+QRAL+LDP + +    L +     ++   + + +   Q+A +
Sbjct: 240 LGKALHTQGKLSEAMAAYQRALRLDPNDADTHCNLGIA---LHDQGKLSEAIAAYQKALQ 296

Query: 263 IYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYE 322
           I P    A   L       G+        + AL V    P  + ++ NL  + + +G   
Sbjct: 297 IDPNYVNAHCNLGKALHTQGKLSEAMAAYQRALRVD---PNYASAHCNLGVTLYHQGKLS 353

Query: 323 KAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKAL 382
           +A   Y    K +     ++  +  LG+     G    A+  +++ L + P+       L
Sbjct: 354 EAIAAYQ---KALQIDPNYVNAHCNLGKALHTQGKLSEAMAAYQRALRVDPNYASAHCNL 410

Query: 383 GHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 417
           G      G++ +A    ++A ++DP DA    +LG
Sbjct: 411 GVTLYHQGKLSEAIAAYQRALRLDPNDADTHCNLG 445



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 67/127 (52%), Gaps = 1/127 (0%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
           A   Y KA +ID +  +     G+ L  +G++ +A +A++  L  D +   A        
Sbjct: 355 AIAAYQKALQIDPNYVNAHCNLGKALHTQGKLSEAMAAYQRALRVDPNYASAHCNLGVTL 414

Query: 173 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 232
           +++G+ S+++  Y+RAL++ P+        +G+  +  G+L +A  A+QRAL +DP + +
Sbjct: 415 YHQGKLSEAIAAYQRALRLDPN-DADTHCNLGIALHDQGKLSEAIAAYQRALLIDPNDAD 473

Query: 233 ALVALAV 239
           A   L +
Sbjct: 474 AHCNLGI 480


>gi|440682547|ref|YP_007157342.1| Tetratricopeptide TPR_1 repeat-containing protein [Anabaena
           cylindrica PCC 7122]
 gi|428679666|gb|AFZ58432.1| Tetratricopeptide TPR_1 repeat-containing protein [Anabaena
           cylindrica PCC 7122]
          Length = 1409

 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 90/350 (25%), Positives = 148/350 (42%), Gaps = 21/350 (6%)

Query: 130 TWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRAL 189
            W  KG      G+   A ++F   LE   D     L +    ++ G Y  ++ F+ +AL
Sbjct: 146 VWFNKGYEQYNAGDFAGAIASFDKALEFKPDYYEVWLIRGVTLYHLGEYEQAVAFFDKAL 205

Query: 190 QVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV--ALAVMDLQANEA 247
           +  P       +  G   Y LG+  +A  ++ +AL++ P+  EA     +A+ +L   E 
Sbjct: 206 EFKPDYHEVWLIRGGALDY-LGEYEQAVASYDKALEIKPDYHEAWCKRGVALANLGEYEQ 264

Query: 248 AGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHS 307
           A     +    +A EI P      N         G++       + AL +  +     H 
Sbjct: 265 A-----VASYDKALEIKPDYHEVGNNRGLLLVHLGEYQKAVASFDKALEIKPNDYDAWH- 318

Query: 308 YYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEK 367
           Y  +A  Y   G+YE+A   Y  +++   + H+ +  +   G     LG+++ A+ +F+K
Sbjct: 319 YRGVALGY--LGEYEQAVASYNKALEIKPEYHQALSNW---GVTLGNLGEYQKAVASFDK 373

Query: 368 VLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGA 427
            LEI PD+ E     G   V LG+ +KA     KA +I P D  A+ + G +L       
Sbjct: 374 ALEIKPDDHEAWCKRGVTLVHLGEYQKAVASFDKALEIKPNDYDAWCNRGVVLCDH---- 429

Query: 428 ALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDAL 475
               ++ A     KA +  P   E  NN GV     GE+E A  S+  AL
Sbjct: 430 -FRQYEQAVASYDKALQIKPDKYEAWNNRGVALGNLGEYEQAVASYDKAL 478



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 90/386 (23%), Positives = 163/386 (42%), Gaps = 38/386 (9%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
           A   Y+KA +I   +   W  +G  L   GE EQA +++   L+   D+  A   +    
Sbjct: 436 AVASYDKALQIKPDKYEAWNNRGVALGNLGEYEQAVASYDKALKIKPDDYQACFNRGVTL 495

Query: 173 FNRGRYSDSLEFYKRALQVHPSCPGA-IRLGIGLCRYKLGQLGKARQAFQRALQLDPENV 231
              G Y  ++  Y + L+  P    A    GI LC   LG+  +A  +F +AL++ P+  
Sbjct: 496 GYLGEYEQAVASYDKVLEFKPDYYDAWYNRGILLCD-NLGRYEQAVASFNKALEIKPDYY 554

Query: 232 EAL----VALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLAN----------- 276
           +A     VAL  +       A   K +E      E +    + L++L             
Sbjct: 555 DAWCNRGVALDHLGEYEQAVASYDKALEIKPDDHETWCKRGVTLDHLGEYEQAVASYDKA 614

Query: 277 -------HFFFTGQHFLVEQLTETALAVTNHG------PTKSHSYYNLARSYHSKGDYEK 323
                  H  + G+   ++ L E   AV ++       P     + +   + ++ G+YE+
Sbjct: 615 LKFKPDYHKAWYGRGVTLDHLGENEQAVASYNKALEFKPDYHEVWNSRGNALNNLGEYEQ 674

Query: 324 AGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALG 383
           A   Y  ++ EI KP ++   +   G     LG++  A+T+++K LE  PD  E     G
Sbjct: 675 AVASYDKAL-EI-KP-DYYDAWCNRGVALDHLGEYEQAVTSYDKALEFKPDKYEAWCNRG 731

Query: 384 HIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAG 443
            +   LG+ E+A     KA +I P   + +I+ G   I+S    + D F +  + + +  
Sbjct: 732 VVLCDLGEYEQAVASYDKALEIKPDLHEVWINRG---IASGNSVSCDPFLSLSSTIARNN 788

Query: 444 EEVPIEVLNNIGVIHFEKGEFESAHQ 469
            ++     + + +  +E+G F+  HQ
Sbjct: 789 PDLDKRGYHGV-LASYEEG-FKYCHQ 812



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 95/373 (25%), Positives = 155/373 (41%), Gaps = 32/373 (8%)

Query: 113 ATQYYNKA--SRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQAC 170
           A  +++KA   + D HE   W+ +G  L   GE EQA +++   LE   D   A   +  
Sbjct: 197 AVAFFDKALEFKPDYHE--VWLIRGGALDYLGEYEQAVASYDKALEIKPDYHEAWCKRGV 254

Query: 171 VEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPEN 230
              N G Y  ++  Y +AL++ P     +    GL    LG+  KA  +F +AL++ P +
Sbjct: 255 ALANLGEYEQAVASYDKALEIKPDY-HEVGNNRGLLLVHLGEYQKAVASFDKALEIKPND 313

Query: 231 VEAL----VALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFL 286
            +A     VAL  +           + +    +A EI P    AL+         G++  
Sbjct: 314 YDAWHYRGVALGYL-------GEYEQAVASYNKALEIKPEYHQALSNWGVTLGNLGEYQK 366

Query: 287 VEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYY 346
                + AL +    P    ++     +    G+Y+KA   +  ++ EI KP+++   + 
Sbjct: 367 AVASFDKALEIK---PDDHEAWCKRGVTLVHLGEYQKAVASFDKAL-EI-KPNDYD-AWC 420

Query: 347 GLGQVQLK-LGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKI 405
             G V       +  A+ +++K L+I PD  E     G     LG+ E+A     KA KI
Sbjct: 421 NRGVVLCDHFRQYEQAVASYDKALQIKPDKYEAWNNRGVALGNLGEYEQAVASYDKALKI 480

Query: 406 DPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEK-G 462
            P D QA  + G  L        L  ++ A     K  E  P   +   N G++  +  G
Sbjct: 481 KPDDYQACFNRGVTL------GYLGEYEQAVASYDKVLEFKPDYYDAWYNRGILLCDNLG 534

Query: 463 EFESAHQSFKDAL 475
            +E A  SF  AL
Sbjct: 535 RYEQAVASFNKAL 547


>gi|195941926|ref|ZP_03087308.1| cell division control protein 27, putative [Borrelia burgdorferi
           80a]
          Length = 379

 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 74/318 (23%), Positives = 134/318 (42%), Gaps = 14/318 (4%)

Query: 123 IDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSL 182
           +D+ E S    +G  L+ +  + +A S F  +LE D +N  AL+G   +E  +  Y  ++
Sbjct: 22  LDVTEKSK---RGYQLIKEERLSEAESLFSDILEKDNENNYALVGLGDIERKKNNYDKAI 78

Query: 183 EFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDL 242
            +Y++ L  HPS   A+  G+G C   L    KA   ++  L+ DPEN+  L  +A    
Sbjct: 79  VYYQKCLVKHPSNNYAL-FGLGDCYRNLDNYKKATDIWEEYLKYDPENITVLTRVAA--- 134

Query: 243 QANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGP 302
              +    +K  +   +  E+ P    AL  +  H ++  + +         +   N   
Sbjct: 135 SYRKLKNFQKSKQTYLKVMELMPDNDYALVGIG-HLYYDFKEYKEALKYWLKMYELNQSK 193

Query: 303 TKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSAL 362
                  ++   Y    ++ + G+ +     EI+ P  F +  +GL        +++ AL
Sbjct: 194 VDVRVLTSIGNCYRKLREFTR-GICFFKKALEIS-PSNF-YAVFGLADCYRGNKEYKEAL 250

Query: 363 TNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS 422
             +  ++E  P N   L  +G  Y  L   E +Q   +KA  +   D   F  LG  LI 
Sbjct: 251 KYWLDIIEKDPKNNLVLTRVGDAYRYLNDYENSQIYYKKALDV---DFDMFAILGLALIQ 307

Query: 423 SDTGAALDAFKTARTLLK 440
            + G   +A    ++L+K
Sbjct: 308 KEQGKYEEALIAIKSLIK 325


>gi|443328425|ref|ZP_21057023.1| tetratricopeptide repeat protein [Xenococcus sp. PCC 7305]
 gi|442792010|gb|ELS01499.1| tetratricopeptide repeat protein [Xenococcus sp. PCC 7305]
          Length = 1259

 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 83/379 (21%), Positives = 149/379 (39%), Gaps = 78/379 (20%)

Query: 134 KGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHP 193
           KG +L   G++ +A S +   L    + V        +   +  +S S++ Y+RA+++ P
Sbjct: 172 KGNILQKIGKIAEAISCYHQALGVAPEFVEVYANLGGIYAQQQEWSKSVDAYQRAIEIKP 231

Query: 194 SCPGA-----------------------------------IRLGIGLCRYKLGQLGKARQ 218
           +  GA                                   I   IG+   +LGQ+ +A Q
Sbjct: 232 NFAGAYRNLAKVWYKQGQKEKAIACTYQALSLEPEKASPQIHHNIGVELLQLGQIEEASQ 291

Query: 219 AFQRALQLDPENVEALVALA--------------------VMDLQANEAAGIRK------ 252
            F+RA++LDP+ + A   LA                    V+  + +E            
Sbjct: 292 CFERAVKLDPQFIVAYQKLAETLEEQGKWQQAALSYRQALVLSPEPSEITAEPPATPSHQ 351

Query: 253 -----------GMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG 301
                      G +K+ +A E Y          A H+   G  +  +Q  E A+ V    
Sbjct: 352 ETEVNLLSQGTGQDKIVQAIERYQLAIAKEPDSAEHYANLGSLYAQKQQWEEAITVYQQA 411

Query: 302 ----PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGD 357
               P  +  Y NLAR       + +A  Y+  ++  +         ++ LG   L+ GD
Sbjct: 412 IKVDPNFAGVYRNLARVLERLEKFAEASKYWFKALS-LEPDRATAVEHFQLGNSLLQQGD 470

Query: 358 FRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 417
             SA+  + + L++ PD       LG + +Q  QIE+A    R+A   + +DA+++  LG
Sbjct: 471 IPSAIACYRQTLQLQPDYSPAYHQLGELLLQQNQIEQASACFRQAIANNSQDAKSYQALG 530

Query: 418 ELLISS-DTGAALDAFKTA 435
            +L ++ D  +A+D ++ A
Sbjct: 531 RILAAAEDWQSAIDCYQKA 549



 Score = 66.2 bits (160), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 117/534 (21%), Positives = 226/534 (42%), Gaps = 61/534 (11%)

Query: 117  YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 176
            Y KA  I       ++  GQ L+ + +++ A + ++  L+  + N      Q  +   R 
Sbjct: 698  YAKALSISPQATDLYLAWGQALVNQNQIDSAIACYEQALKV-QPNFAEAHRQLAILLERL 756

Query: 177  RYSDSLEFYKRALQVHPS---CPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEA 233
               ++ +    AL+  P        + LG      K  Q  KA + ++RAL++ P  VE 
Sbjct: 757  GNQEAADHRYLALENAPQETKVEAYLELGNTFLSQK--QPLKAEKCYRRALEISPHLVEP 814

Query: 234  LVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTET 293
             + L  + LQ  +    R   E  Q+A   +P       +L    ++ GQ          
Sbjct: 815  YLCLGKLLLQEQKWPAAR---EVYQQAVAQHPSNIDLFYHLGETDYYQGQWGEAIASYRQ 871

Query: 294  ALAVTNHGPTKSHSYYNLARSYHSKGD--------YEKAGLYYMASVKEINKPHEFIFPY 345
             +A+            N  ++YH +GD         E    Y+ A    +N   +F++ Y
Sbjct: 872  VIALQP----------NFWQAYHHQGDALLNLEQWSEAVACYHQALA--LNP--DFVWSY 917

Query: 346  YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQE-------L 398
            + LG    KL  +  A+  ++K+ EI P+  +  +    I  QLG +   QE       +
Sbjct: 918  HNLGTALTKLEQWSDAIACYDKISEIAPEFWQENQGDFAIQSQLGDVLFQQERWPEAISV 977

Query: 399  LRKAAKIDPRDAQAFIDLGELLISSDTG-AALDAFKTARTLLKKAGEEVPIEVLNNIGVI 457
             ++A+++ P D     +LG+   S +    A+   +TA  L  K            +G I
Sbjct: 978  YQRASQLKPNDFWCHHNLGKAYYSLEQWEQAIAPLQTAARLNSKCAWS-----RYYLGEI 1032

Query: 458  HFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFE----- 512
            +  + +++ A  +++++L     +  +++K    +   + S +   D   ++R +     
Sbjct: 1033 YARQEKWDLAVAAYRESLAISTEIAEVENKLSHALHQQAKSNI--ADASKYYRSQVSQDP 1090

Query: 513  NDGNH----VELPWNKVTVLFNLARLL---EQIHDTVAASVLYRLILFKYQDYVDAYLRL 565
             D N     +E+  N  TV + LA  L   ++IH+   AS+ Y+  +    DY +A+++L
Sbjct: 1091 GDINSYRKLLEITQNDPTVYYGLANALAAADKIHE---ASIYYQKAIAIKPDYDEAFIQL 1147

Query: 566  AAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAA 619
              I  ++N  Q +I+  ++AL+ N +    L+ LG   L+N  + +A   +R A
Sbjct: 1148 GEILLSQNRWQEAIDNYHQALEKNPQNEKILANLGAALLENGRFKEAMTVYRQA 1201



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 105/483 (21%), Positives = 180/483 (37%), Gaps = 75/483 (15%)

Query: 154 VLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQL 213
            L  +      +L +A       ++ ++L   +  +   P  P     G  L   K+G++
Sbjct: 125 TLSPEEKTAEIVLQKAINYLAENKWQEALTVCEEVIAATPIAPAYKTKGNIL--QKIGKI 182

Query: 214 GKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNY 273
            +A   + +AL + PE VE    L  +  Q  E +   K ++  QRA EI P        
Sbjct: 183 AEAISCYHQALGVAPEFVEVYANLGGIYAQQQEWS---KSVDAYQRAIEIKP-------- 231

Query: 274 LANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA-GLYYMASV 332
                 F G                        +Y NLA+ ++ +G  EKA    Y A  
Sbjct: 232 -----NFAG------------------------AYRNLAKVWYKQGQKEKAIACTYQALS 262

Query: 333 KEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQI 392
            E  K    I  ++ +G   L+LG    A   FE+ +++ P      + L     + G+ 
Sbjct: 263 LEPEKASPQI--HHNIGVELLQLGQIEEASQCFERAVKLDPQFIVAYQKLAETLEEQGKW 320

Query: 393 EKAQELLRKAAKIDPRDAQAFIDLGEL---------LISSDTGAALDAFKTARTLLKKAG 443
           ++A    R+A  + P  ++   +             L+S  TG         R  L  A 
Sbjct: 321 QQAALSYRQALVLSPEPSEITAEPPATPSHQETEVNLLSQGTGQDKIVQAIERYQLAIAK 380

Query: 444 EEVPIEVLNNIGVIHFEKGEFESAHQSFKDALG-----DGIWLTLLDSKTKTYVIDASAS 498
           E    E   N+G ++ +K ++E A   ++ A+       G++  L     +     A AS
Sbjct: 381 EPDSAEHYANLGSLYAQKQQWEEAITVYQQAIKVDPNFAGVYRNLARVLERLEKF-AEAS 439

Query: 499 MLQFKDMQLFHRFENDGNHVELPWNKVTVL--FNLARLLEQIHDTVAASVLYRLILFKYQ 556
              FK + L    E D         + T +  F L   L Q  D  +A   YR  L    
Sbjct: 440 KYWFKALSL----EPD---------RATAVEHFQLGNSLLQQGDIPSAIACYRQTLQLQP 486

Query: 557 DYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF 616
           DY  AY +L  +   +N ++ +     +A+  N +   +   LG +    +DW  A + +
Sbjct: 487 DYSPAYHQLGELLLQQNQIEQASACFRQAIANNSQDAKSYQALGRILAAAEDWQSAIDCY 546

Query: 617 RAA 619
           + A
Sbjct: 547 QKA 549



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 61/296 (20%), Positives = 126/296 (42%), Gaps = 28/296 (9%)

Query: 171  VEFNRGRYSDSLEFYKRALQVHPS---CPGAIRLGIGLCRYKLGQLGKARQAFQRALQLD 227
            V F + R+ +++  Y+RA Q+ P+   C       +G   Y L Q  +A    Q A +L+
Sbjct: 964  VLFQQERWPEAISVYQRASQLKPNDFWC----HHNLGKAYYSLEQWEQAIAPLQTAARLN 1019

Query: 228  PENVEALVALAVMDLQANE----AAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQ 283
             +   +   L  +  +  +     A  R+ +       E+    + AL+  A        
Sbjct: 1020 SKCAWSRYYLGEIYARQEKWDLAVAAYRESLAISTEIAEVENKLSHALHQQAKSNIADAS 1079

Query: 284  HFLVEQLTETA---------LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKE 334
             +   Q+++           L +T + PT    YY LA +  +     +A +YY  ++  
Sbjct: 1080 KYYRSQVSQDPGDINSYRKLLEITQNDPT---VYYGLANALAAADKIHEASIYYQKAIA- 1135

Query: 335  INKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK 394
              KP ++   +  LG++ L    ++ A+ N+ + LE  P N + L  LG   ++ G+ ++
Sbjct: 1136 -IKP-DYDEAFIQLGEILLSQNRWQEAIDNYHQALEKNPQNEKILANLGAALLENGRFKE 1193

Query: 395  AQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEV 450
            A  + R+A  ++P +      +G++   +  G    A ++ R  ++     +P+E 
Sbjct: 1194 AMTVYRQAITLNPNNPMLHYRIGDVF--ARQGETDQASESYRRAVQLETTNIPLET 1247



 Score = 43.9 bits (102), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 10/131 (7%)

Query: 346  YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKI 405
            Y   QV    GD  S    + K+LEI  ++      L +      +I +A    +KA  I
Sbjct: 1081 YYRSQVSQDPGDINS----YRKLLEITQNDPTVYYGLANALAAADKIHEASIYYQKAIAI 1136

Query: 406  DPRDAQAFIDLGELLISSDTGA-ALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEF 464
             P   +AFI LGE+L+S +    A+D +  A  L K    E   ++L N+G    E G F
Sbjct: 1137 KPDYDEAFIQLGEILLSQNRWQEAIDNYHQA--LEKNPQNE---KILANLGAALLENGRF 1191

Query: 465  ESAHQSFKDAL 475
            + A   ++ A+
Sbjct: 1192 KEAMTVYRQAI 1202


>gi|428775101|ref|YP_007166888.1| hypothetical protein PCC7418_0444 [Halothece sp. PCC 7418]
 gi|428689380|gb|AFZ42674.1| Tetratricopeptide TPR_1 repeat-containing protein [Halothece sp.
           PCC 7418]
          Length = 314

 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/308 (22%), Positives = 132/308 (42%), Gaps = 44/308 (14%)

Query: 135 GQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS 194
           G + LA+ E E+A +A++  +E    N  A  G          +++++  Y++AL+++P 
Sbjct: 51  GAIHLARKEFEKAIAAYQKNIEFKPKNAQAYHGLGDAYLGMNNFTEAITAYQKALEINPQ 110

Query: 195 CPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGM 254
            P  +   +G    + GQ   A  A+Q+A++L+P        L  + LQ N     ++ +
Sbjct: 111 LPPYVHKKLGDAFQQAGQKQAAITAYQKAVELNPNQAGFYNVLGDVYLQTNNP---KEAI 167

Query: 255 EKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARS 314
              Q+A EI P                       QL           P   H    L  +
Sbjct: 168 TAYQKALEINP-----------------------QL-----------PPYVHK--KLGDA 191

Query: 315 YHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPD 374
               G  E+A   Y +++  +N    ++  Y+ LGQ+  +      A+T FE  +E+  D
Sbjct: 192 LKQGGQIEEAIATYQSAIA-LNPDKPWL--YHALGQIYFQTNQLAEAVTAFETFVELKND 248

Query: 375 NCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKT 434
           N    + LG +Y + G++++A +  + A  + P + Q +  +G+L +  + G    A K 
Sbjct: 249 NPNVYQKLGQVYHKQGKVKEASQCYKNAIALKPENPQVYRLIGDLFL--ENGREEQALKA 306

Query: 435 ARTLLKKA 442
            R  L ++
Sbjct: 307 YRRALSQS 314



 Score = 47.8 bits (112), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 65/129 (50%), Gaps = 10/129 (7%)

Query: 351 VQLK-LGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRD 409
           +QLK  G    AL   E++L I PD+  TL  LG I++   + EKA    +K  +  P++
Sbjct: 18  IQLKNKGQLDQALNKIEQILIISPDHAPTLNQLGAIHLARKEFEKAIAAYQKNIEFKPKN 77

Query: 410 AQAFIDLGELLISSDTGAALDAFKTARTLLKKAGE---EVPIEVLNNIGVIHFEKGEFES 466
           AQA+  LG      D    ++ F  A T  +KA E   ++P  V   +G    + G+ ++
Sbjct: 78  AQAYHGLG------DAYLGMNNFTEAITAYQKALEINPQLPPYVHKKLGDAFQQAGQKQA 131

Query: 467 AHQSFKDAL 475
           A  +++ A+
Sbjct: 132 AITAYQKAV 140



 Score = 39.7 bits (91), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 32/110 (29%), Positives = 57/110 (51%), Gaps = 5/110 (4%)

Query: 117 YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK--IVLEADRDNVPALLGQACVEFN 174
           Y  A  ++  +P  +   GQ+     ++ +A +AF+  + L+ D  NV   LGQ  V   
Sbjct: 205 YQSAIALNPDKPWLYHALGQIYFQTNQLAEAVTAFETFVELKNDNPNVYQKLGQ--VYHK 262

Query: 175 RGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRAL 224
           +G+  ++ + YK A+ + P  P   RL IG    + G+  +A +A++RAL
Sbjct: 263 QGKVKEASQCYKNAIALKPENPQVYRL-IGDLFLENGREEQALKAYRRAL 311


>gi|21228450|ref|NP_634372.1| O-linked N-acetylglucosamine transferase [Methanosarcina mazei Go1]
 gi|20906930|gb|AAM32044.1| O-linked N-acetylglucosamine transferase [Methanosarcina mazei Go1]
          Length = 412

 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 80/339 (23%), Positives = 143/339 (42%), Gaps = 55/339 (16%)

Query: 78  VRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQL 137
           +  E   + N +   Y+ +G+ E            A + Y KA  +    P+ W GK   
Sbjct: 128 INSEDADLWNNMAFSYSQIGEYEK-----------AVEAYGKALDLKPDYPNAWYGKALN 176

Query: 138 LLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPG 197
           L   G  E+A  A+ IVL+ + +   A  G+       G Y +++  Y +AL++ P    
Sbjct: 177 LSQAGRYEEAVDAYDIVLKENSNYKEAWAGKGIALGQMGNYDEAIIAYDKALEIDPEFLE 236

Query: 198 AIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKM 257
           A     G+    LG   +A +A+++A+++DPEN +A   + +              +E +
Sbjct: 237 AWYYK-GVDLDSLGSFKQALKAYEKAVEIDPENDDAWNNMGI-------------DLENL 282

Query: 258 QRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHS 317
           +R  E       A+N                   E A+ + +     S  +YN   +   
Sbjct: 283 ERYDE-------AINAF-----------------EKAIEINSE---NSDVWYNKGFTLSQ 315

Query: 318 KGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCE 377
              +++A   Y  +V+      E++  Y  LG V  +L  F  AL  +EK L++ P+  +
Sbjct: 316 VQRFDEAVEAYRKAVQ---LDPEYLEAYSSLGFVLAQLKRFEEALDIYEKALKLDPEAAD 372

Query: 378 TLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDL 416
           +          LG+ E+A++  RKA +IDPR A+   D+
Sbjct: 373 SWFGKAVCLSYLGREEEAEDAYRKAVEIDPRYAEIGGDI 411



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 76/308 (24%), Positives = 128/308 (41%), Gaps = 48/308 (15%)

Query: 109 HFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQ 168
            F  A + Y +A +I+  +   W          GE E+A  A+   L+   D   A  G+
Sbjct: 114 RFEEALKLYQEAVKINSEDADLWNNMAFSYSQIGEYEKAVEAYGKALDLKPDYPNAWYGK 173

Query: 169 ACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDP 228
           A      GRY ++++ Y   L+ + +   A   G G+   ++G   +A  A+ +AL++DP
Sbjct: 174 ALNLSQAGRYEEAVDAYDIVLKENSNYKEAWA-GKGIALGQMGNYDEAIIAYDKALEIDP 232

Query: 229 ENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVE 288
           E +EA     V DL +      ++ ++  ++A EI P                       
Sbjct: 233 EFLEAWYYKGV-DLDS--LGSFKQALKAYEKAVEIDP----------------------- 266

Query: 289 QLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYG- 347
              E   A  N G        NL R   +   +EKA         EIN  +  ++   G 
Sbjct: 267 ---ENDDAWNNMGIDLE----NLERYDEAINAFEKA--------IEINSENSDVWYNKGF 311

Query: 348 -LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKID 406
            L QVQ     F  A+  + K +++ P+  E   +LG +  QL + E+A ++  KA K+D
Sbjct: 312 TLSQVQR----FDEAVEAYRKAVQLDPEYLEAYSSLGFVLAQLKRFEEALDIYEKALKLD 367

Query: 407 PRDAQAFI 414
           P  A ++ 
Sbjct: 368 PEAADSWF 375



 Score = 56.6 bits (135), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 56/220 (25%), Positives = 99/220 (45%), Gaps = 21/220 (9%)

Query: 204 GLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEI 263
           GL   +LG+  +A  AF++A+  DP N+  L          N  A   + + + + A ++
Sbjct: 72  GLDLLRLGKYNEAIIAFEKAIDKDPGNIYLL----------NNKAAALESLGRFEEALKL 121

Query: 264 YPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG------PTKSHSYYNLARSYHS 317
           Y   A+ +N   +   +    F   Q+ E   AV  +G      P   +++Y  A +   
Sbjct: 122 YQ-EAVKINS-EDADLWNNMAFSYSQIGEYEKAVEAYGKALDLKPDYPNAWYGKALNLSQ 179

Query: 318 KGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCE 377
            G YE+A   Y   +KE +   E    + G G    ++G++  A+  ++K LEI P+  E
Sbjct: 180 AGRYEEAVDAYDIVLKENSNYKE---AWAGKGIALGQMGNYDEAIIAYDKALEIDPEFLE 236

Query: 378 TLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 417
                G     LG  ++A +   KA +IDP +  A+ ++G
Sbjct: 237 AWYYKGVDLDSLGSFKQALKAYEKAVEIDPENDDAWNNMG 276


>gi|452210866|ref|YP_007490980.1| GTP cyclohydrolase III (methanopterin) [Methanosarcina mazei Tuc01]
 gi|452100768|gb|AGF97708.1| GTP cyclohydrolase III (methanopterin) [Methanosarcina mazei Tuc01]
          Length = 398

 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 81/340 (23%), Positives = 144/340 (42%), Gaps = 57/340 (16%)

Query: 78  VRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQL 137
           +  E   + N +   Y+ +G+ E            A + Y KA  +    P+ W GK   
Sbjct: 114 INSEDADLWNNMAFSYSQIGEYEK-----------AVEAYGKALDLKPDYPNAWYGKALN 162

Query: 138 LLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPG 197
           L   G  E+A  A+ IVL+ + +   A  G+       G Y +++  Y +AL++ P    
Sbjct: 163 LSQAGRYEEAVDAYDIVLKENSNYKEAWAGKGIALGQMGNYDEAIIAYDKALEIDPEFLE 222

Query: 198 AIRL-GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEK 256
           A    G+ L    LG   +A +A+++A+++DPEN +A   + +              +E 
Sbjct: 223 AWYYKGVDLDS--LGSFKQALKAYEKAVEIDPENDDAWNNMGI-------------DLEN 267

Query: 257 MQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYH 316
           ++R  E       A+N                   E A+ + +     S  +YN   +  
Sbjct: 268 LERYDE-------AINAF-----------------EKAIEINSE---NSDVWYNKGFTLS 300

Query: 317 SKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNC 376
               +++A   Y  +V+      E++  Y  LG V  +L  F  AL  +EK L++ P+  
Sbjct: 301 QVQRFDEAVEAYRKAVQ---LDPEYLEAYSSLGFVLAQLKRFEEALDIYEKALKLDPEAA 357

Query: 377 ETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDL 416
           ++          LG+ E+A++  RKA +IDPR A+   D+
Sbjct: 358 DSWFGKAVCLSYLGREEEAEDAYRKAVEIDPRYAEIGGDI 397



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 76/308 (24%), Positives = 128/308 (41%), Gaps = 48/308 (15%)

Query: 109 HFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQ 168
            F  A + Y +A +I+  +   W          GE E+A  A+   L+   D   A  G+
Sbjct: 100 RFEEALKLYQEAVKINSEDADLWNNMAFSYSQIGEYEKAVEAYGKALDLKPDYPNAWYGK 159

Query: 169 ACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDP 228
           A      GRY ++++ Y   L+ + +   A   G G+   ++G   +A  A+ +AL++DP
Sbjct: 160 ALNLSQAGRYEEAVDAYDIVLKENSNYKEAWA-GKGIALGQMGNYDEAIIAYDKALEIDP 218

Query: 229 ENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVE 288
           E +EA     V DL +      ++ ++  ++A EI P                       
Sbjct: 219 EFLEAWYYKGV-DLDS--LGSFKQALKAYEKAVEIDP----------------------- 252

Query: 289 QLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYG- 347
              E   A  N G        NL R   +   +EKA         EIN  +  ++   G 
Sbjct: 253 ---ENDDAWNNMGIDLE----NLERYDEAINAFEKA--------IEINSENSDVWYNKGF 297

Query: 348 -LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKID 406
            L QVQ     F  A+  + K +++ P+  E   +LG +  QL + E+A ++  KA K+D
Sbjct: 298 TLSQVQR----FDEAVEAYRKAVQLDPEYLEAYSSLGFVLAQLKRFEEALDIYEKALKLD 353

Query: 407 PRDAQAFI 414
           P  A ++ 
Sbjct: 354 PEAADSWF 361



 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 56/220 (25%), Positives = 99/220 (45%), Gaps = 21/220 (9%)

Query: 204 GLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEI 263
           GL   +LG+  +A  AF++A+  DP N+  L          N  A   + + + + A ++
Sbjct: 58  GLDLLRLGKYNEAIIAFEKAIDKDPGNIYLL----------NNKAAALESLGRFEEALKL 107

Query: 264 YPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG------PTKSHSYYNLARSYHS 317
           Y   A+ +N   +   +    F   Q+ E   AV  +G      P   +++Y  A +   
Sbjct: 108 YQ-EAVKIN-SEDADLWNNMAFSYSQIGEYEKAVEAYGKALDLKPDYPNAWYGKALNLSQ 165

Query: 318 KGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCE 377
            G YE+A   Y   +KE +   E    + G G    ++G++  A+  ++K LEI P+  E
Sbjct: 166 AGRYEEAVDAYDIVLKENSNYKE---AWAGKGIALGQMGNYDEAIIAYDKALEIDPEFLE 222

Query: 378 TLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 417
                G     LG  ++A +   KA +IDP +  A+ ++G
Sbjct: 223 AWYYKGVDLDSLGSFKQALKAYEKAVEIDPENDDAWNNMG 262


>gi|341897224|gb|EGT53159.1| CBN-OGT-1 protein [Caenorhabditis brenneri]
          Length = 1171

 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 107/480 (22%), Positives = 202/480 (42%), Gaps = 31/480 (6%)

Query: 142 GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 201
           G   +A     +V + D+ N+P LL  + + F       S+ +   A++V+P+C  A   
Sbjct: 155 GNYAEAEKYCNLVFQTDQQNLPTLLLLSAINFQTKNLEKSMHYSLMAIKVNPNCAEAYS- 213

Query: 202 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 261
            +G    + G L +A + ++ A++L PE ++A + LA   +   +   + + +     A 
Sbjct: 214 NLGNYYKEKGHLAEALEHYRTAVKLKPEFIDAYINLAAALVSGGD---LEQAVNAYFNAL 270

Query: 262 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 319
            I P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++S+G
Sbjct: 271 AINPDLYCVRS--DLGNLLKAMGK---LEEAKVCYLKAIETQPQFAVAWSNLGCVFNSQG 325

Query: 320 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 379
           +   A  ++    K +     F+  Y  LG V  +   F  A++ + + L ++ ++    
Sbjct: 326 EIWLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVSAYLRALNLHGNHAVVH 382

Query: 380 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLL 439
             L  +Y + G I+ A +  +KA ++ P    A+ +L   L   + G      + A    
Sbjct: 383 GNLACVYYEQGLIDLAIDTYKKAIELQPIFPDAYCNLANAL--KEKGC----IQEAEEAY 436

Query: 440 KKAGEEVPI--EVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASA 497
            KA E  P   +  NN+  I  E+G+ E A + +  AL   I+     + +        A
Sbjct: 437 LKALELCPTHADSQNNLANIKREQGKIEDATRLYLKALE--IYPEFAAAHSNL------A 488

Query: 498 SMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQD 557
           S+LQ +  +L     +    + +         N+   L+++ D+ AA   Y   +     
Sbjct: 489 SILQ-QQGKLSEAILHYKEAIRIAPTFADAYSNMGNTLKEMGDSNAAIACYNRAIQINPA 547

Query: 558 YVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFR 617
           + DA+  LA+I K   N+  +I+  N ALK+   +P+A   L        DW    +  R
Sbjct: 548 FADAHSNLASIHKDAGNMAEAIQSYNTALKLKPDFPDAFCNLAHCLQIICDWTGYDKRIR 607



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 102/454 (22%), Positives = 187/454 (41%), Gaps = 41/454 (9%)

Query: 207 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY 266
           +++ G   +A +      Q D +N+  L+ L+ ++ Q      + K M     A ++ P 
Sbjct: 151 QFQAGNYAEAEKYCNLVFQTDQQNLPTLLLLSAINFQTK---NLEKSMHYSLMAIKVNPN 207

Query: 267 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGL 326
           CA A + L N++   G   L E L     AV    P    +Y NLA +  S GD E+A  
Sbjct: 208 CAEAYSNLGNYYKEKGH--LAEALEHYRTAV-KLKPEFIDAYINLAAALVSGGDLEQAVN 264

Query: 327 YYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIY 386
            Y  ++  IN   +       LG +   +G    A   + K +E  P        LG ++
Sbjct: 265 AYFNALA-INP--DLYCVRSDLGNLLKAMGKLEEAKVCYLKAIETQPQFAVAWSNLGCVF 321

Query: 387 VQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDT-GAALDAFKTARTLLKKAGEE 445
              G+I  A     KA  +DP    A+I+LG +L  +     A+ A+  A  L       
Sbjct: 322 NSQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVSAYLRALNL--HGNHA 379

Query: 446 VPIEVLNNIGVIHFEKGEFESAHQSFKDALG-----DGIWLTLLDS-KTKTYVIDASASM 499
           V   V  N+  +++E+G  + A  ++K A+         +  L ++ K K  + +A  + 
Sbjct: 380 V---VHGNLACVYYEQGLIDLAIDTYKKAIELQPIFPDAYCNLANALKEKGCIQEAEEAY 436

Query: 500 LQFKDMQLFHR-FENDGNHVELPWNKV---TVLF---------------NLARLLEQIHD 540
           L+  ++   H   +N+  +++    K+   T L+               NLA +L+Q   
Sbjct: 437 LKALELCPTHADSQNNLANIKREQGKIEDATRLYLKALEIYPEFAAAHSNLASILQQQGK 496

Query: 541 TVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLG 600
              A + Y+  +     + DAY  +    K   +   +I   N A+++N  + +A S L 
Sbjct: 497 LSEAILHYKEAIRIAPTFADAYSNMGNTLKEMGDSNAAIACYNRAIQINPAFADAHSNLA 556

Query: 601 DLELKNDDWVKAKETFRAASD-ATDGKDSYATLS 633
            +     +  +A +++  A     D  D++  L+
Sbjct: 557 SIHKDAGNMAEAIQSYNTALKLKPDFPDAFCNLA 590



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 83/375 (22%), Positives = 157/375 (41%), Gaps = 30/375 (8%)

Query: 109 HFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAF--KIVLEADRDNVPALL 166
           H   A ++Y  A ++       ++     L++ G++EQA +A+   + +  D   V + L
Sbjct: 224 HLAEALEHYRTAVKLKPEFIDAYINLAAALVSGGDLEQAVNAYFNALAINPDLYCVRSDL 283

Query: 167 GQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQL 226
           G        G+  ++   Y +A++  P    A    +G      G++  A   F++A+ L
Sbjct: 284 GNLLKAM--GKLEEAKVCYLKAIETQPQFAVAWS-NLGCVFNSQGEIWLAIHHFEKAVTL 340

Query: 227 DPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFL 286
           DP  ++A + L  +     EA    + +    RA  ++   A+    LA  ++  G   L
Sbjct: 341 DPNFLDAYINLGNV---LKEARIFDRAVSAYLRALNLHGNHAVVHGNLACVYYEQG---L 394

Query: 287 VEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYY 346
           ++   +T        P    +Y NLA +   KG  ++A   Y+ +++        + P +
Sbjct: 395 IDLAIDTYKKAIELQPIFPDAYCNLANALKEKGCIQEAEEAYLKALE--------LCPTH 446

Query: 347 G-----LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRK 401
                 L  ++ + G    A   + K LEIYP+       L  I  Q G++ +A    ++
Sbjct: 447 ADSQNNLANIKREQGKIEDATRLYLKALEIYPEFAAAHSNLASILQQQGKLSEAILHYKE 506

Query: 402 AAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFE 460
           A +I P  A A+ ++G  L    D+ AA+  +  A  +          +  +N+  IH +
Sbjct: 507 AIRIAPTFADAYSNMGNTLKEMGDSNAAIACYNRAIQINPAFA-----DAHSNLASIHKD 561

Query: 461 KGEFESAHQSFKDAL 475
            G    A QS+  AL
Sbjct: 562 AGNMAEAIQSYNTAL 576



 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 72/332 (21%), Positives = 131/332 (39%), Gaps = 48/332 (14%)

Query: 89  LGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQAS 148
             V ++ LG +   Q E      LA  ++ KA  +D +    ++  G +L      ++A 
Sbjct: 310 FAVAWSNLGCVFNSQGE----IWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAV 365

Query: 149 SAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRY 208
           SA+   L    ++       ACV + +G    +++ YK+A+++ P  P A    +     
Sbjct: 366 SAYLRALNLHGNHAVVHGNLACVYYEQGLIDLAIDTYKKAIELQPIFPDA-YCNLANALK 424

Query: 209 KLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCA 268
           + G + +A +A+ +AL+L P + ++   LA +     E   I        +A EIYP  A
Sbjct: 425 EKGCIQEAEEAYLKALELCPTHADSQNNLANIK---REQGKIEDATRLYLKALEIYPEFA 481

Query: 269 MALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYY 328
            A                                   HS  NLA     +G   +A L+Y
Sbjct: 482 AA-----------------------------------HS--NLASILQQQGKLSEAILHY 504

Query: 329 MASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQ 388
             +++       F   Y  +G    ++GD  +A+  + + ++I P   +    L  I+  
Sbjct: 505 KEAIRIAPT---FADAYSNMGNTLKEMGDSNAAIACYNRAIQINPAFADAHSNLASIHKD 561

Query: 389 LGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 420
            G + +A +    A K+ P    AF +L   L
Sbjct: 562 AGNMAEAIQSYNTALKLKPDFPDAFCNLAHCL 593



 Score = 53.9 bits (128), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 74/307 (24%), Positives = 129/307 (42%), Gaps = 14/307 (4%)

Query: 135 GQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS 194
           G LL A G++E+A   +   +E       A     CV  ++G    ++  +++A+ + P+
Sbjct: 284 GNLLKAMGKLEEAKVCYLKAIETQPQFAVAWSNLGCVFNSQGEIWLAIHHFEKAVTLDPN 343

Query: 195 CPGA-IRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKG 253
              A I LG  L   ++    +A  A+ RAL L   +      LA +     E   I   
Sbjct: 344 FLDAYINLGNVLKEARI--FDRAVSAYLRALNLHGNHAVVHGNLACVYY---EQGLIDLA 398

Query: 254 MEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLAR 313
           ++  ++A E+ P    A   LAN     G    +++  E  L      PT + S  NLA 
Sbjct: 399 IDTYKKAIELQPIFPDAYCNLANALKEKG---CIQEAEEAYLKALELCPTHADSQNNLAN 455

Query: 314 SYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYP 373
               +G  E A   Y+ ++ EI    EF   +  L  +  + G    A+ ++++ + I P
Sbjct: 456 IKREQGKIEDATRLYLKAL-EIYP--EFAAAHSNLASILQQQGKLSEAILHYKEAIRIAP 512

Query: 374 DNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFK 433
              +    +G+   ++G    A     +A +I+P  A A  +L    I  D G   +A +
Sbjct: 513 TFADAYSNMGNTLKEMGDSNAAIACYNRAIQINPAFADAHSNLAS--IHKDAGNMAEAIQ 570

Query: 434 TARTLLK 440
           +  T LK
Sbjct: 571 SYNTALK 577


>gi|430741335|ref|YP_007200464.1| hypothetical protein Sinac_0326 [Singulisphaera acidiphila DSM
           18658]
 gi|430013055|gb|AGA24769.1| tetratricopeptide repeat protein [Singulisphaera acidiphila DSM
           18658]
          Length = 779

 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 77/335 (22%), Positives = 138/335 (41%), Gaps = 44/335 (13%)

Query: 117 YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 176
           YN+A R+D  + S +  +G     KG++++A + +   +  D  N PA   +      +G
Sbjct: 264 YNEAIRLDPDDASAYFNRGHAWSQKGDLDKAIADYNETIRLDPTNTPAYFNRGYAWNQKG 323

Query: 177 RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVA 236
               ++  +  A+++ P+   A  +  G    + G+  KA   F  A++LDP N  A + 
Sbjct: 324 DLDKAIADFDEAIRLDPNDASAY-VNQGCAWGEKGEHDKAIADFNEAIRLDPTNTWAYLN 382

Query: 237 L------------AVMDLQANE-----------------AAGIRKGMEKM----QRAFEI 263
                        A+ D  ANE                 A G +K  +K       A  +
Sbjct: 383 RSHAWSEKEEYDKAIAD--ANEIIRLDPQNAWAYFKRGYAWGKKKEHDKAIADDNEAIRL 440

Query: 264 YPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEK 323
            P  A A  YL   + +  +    + +T+   A+    PT + +Y+N   ++  K DY+K
Sbjct: 441 DPTNAWA--YLNRGYAWDEKEEHDKAITDFNKAIR-LDPTNTWAYFNRGYAWGQKEDYDK 497

Query: 324 AGLYYMASVKE-INKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKAL 382
           A    +A   E I     +   Y   G    +  D+  A+ +F K + + P N       
Sbjct: 498 A----IADFNEAIQLDPNYTSAYLNRGYAWSQKNDYDKAIADFNKAIRLDPINAPAYFNR 553

Query: 383 GHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 417
           GH + Q    +KA     +A ++DP +A A+++ G
Sbjct: 554 GHAWSQKEGYDKAIADYNEAIRLDPNNALAYLNRG 588



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 64/306 (20%), Positives = 123/306 (40%), Gaps = 20/306 (6%)

Query: 117 YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 176
           YN+A R+D  + S +  +G     K + ++  + +   +  D D+ P    +A     + 
Sbjct: 196 YNEAIRLDPDDASAYFNRGYAWSKKKDYDKTIADYNEAIRLDPDDAPTYFNRAHAWSQKE 255

Query: 177 RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVA 236
            Y  ++  Y  A+++ P    A     G    + G L KA   +   ++LDP N  A   
Sbjct: 256 DYDKTIADYNEAIRLDPDDASAY-FNRGHAWSQKGDLDKAIADYNETIRLDPTNTPAYFN 314

Query: 237 LAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALA 296
                   N+   + K +     A  + P  A A       +   G+H       + A+A
Sbjct: 315 RGYA---WNQKGDLDKAIADFDEAIRLDPNDASAYVNQGCAWGEKGEH-------DKAIA 364

Query: 297 VTNHG----PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINK-PHEFIFPYYGLGQV 351
             N      PT + +Y N + ++  K +Y+KA    +A   EI +   +  + Y+  G  
Sbjct: 365 DFNEAIRLDPTNTWAYLNRSHAWSEKEEYDKA----IADANEIIRLDPQNAWAYFKRGYA 420

Query: 352 QLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQ 411
             K  +   A+ +  + + + P N       G+ + +  + +KA     KA ++DP +  
Sbjct: 421 WGKKKEHDKAIADDNEAIRLDPTNAWAYLNRGYAWDEKEEHDKAITDFNKAIRLDPTNTW 480

Query: 412 AFIDLG 417
           A+ + G
Sbjct: 481 AYFNRG 486



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 65/304 (21%), Positives = 125/304 (41%), Gaps = 22/304 (7%)

Query: 117 YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 176
           +++A R+D ++ S +V +G     KGE ++A + F   +  D  N  A L ++     + 
Sbjct: 332 FDEAIRLDPNDASAYVNQGCAWGEKGEHDKAIADFNEAIRLDPTNTWAYLNRSHAWSEKE 391

Query: 177 RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVA 236
            Y  ++      +++ P    A     G    K  +  KA      A++LDP N  A + 
Sbjct: 392 EYDKAIADANEIIRLDPQNAWAY-FKRGYAWGKKKEHDKAIADDNEAIRLDPTNAWAYLN 450

Query: 237 LAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALA 296
                   +E     K +    +A  + P    A       +F  G  +  ++  + A+A
Sbjct: 451 RGYA---WDEKEEHDKAITDFNKAIRLDPTNTWA-------YFNRGYAWGQKEDYDKAIA 500

Query: 297 VTNHG----PTKSHSYYNLARSYHSKGDYEKAGLYYMASVK--EINKPHEFIFPYYGLGQ 350
             N      P  + +Y N   ++  K DY+KA   +  +++   IN P      Y+  G 
Sbjct: 501 DFNEAIQLDPNYTSAYLNRGYAWSQKNDYDKAIADFNKAIRLDPINAP-----AYFNRGH 555

Query: 351 VQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDA 410
              +   +  A+ ++ + + + P+N       GH   +  + +KA     +A +IDP+ A
Sbjct: 556 AWSQKEGYDKAIADYNEAIRLDPNNALAYLNRGHARSKTQEHDKAIADYNEAIRIDPKAA 615

Query: 411 QAFI 414
            A+I
Sbjct: 616 NAYI 619



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 52/237 (21%), Positives = 100/237 (42%), Gaps = 18/237 (7%)

Query: 185 YKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQA 244
           Y  A++++P+   A     G    +  +  KA   +  A++LDP+   A         Q 
Sbjct: 128 YDEAIRLNPNDASAY-FNRGYAWSERQEYDKAIADYNEAIRLDPQLTLAYHNRGYAWSQK 186

Query: 245 NEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG--- 301
           N+     K +     A  + P  A A       +F  G  +  ++  +  +A  N     
Sbjct: 187 ND---YDKAITDYNEAIRLDPDDASA-------YFNRGYAWSKKKDYDKTIADYNEAIRL 236

Query: 302 -PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRS 360
            P  + +Y+N A ++  K DY+K    Y  +++    P +    Y+  G    + GD   
Sbjct: 237 DPDDAPTYFNRAHAWSQKEDYDKTIADYNEAIRL--DPDD-ASAYFNRGHAWSQKGDLDK 293

Query: 361 ALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 417
           A+ ++ + + + P N       G+ + Q G ++KA     +A ++DP DA A+++ G
Sbjct: 294 AIADYNETIRLDPTNTPAYFNRGYAWNQKGDLDKAIADFDEAIRLDPNDASAYVNQG 350



 Score = 42.7 bits (99), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 52/221 (23%), Positives = 91/221 (41%), Gaps = 10/221 (4%)

Query: 105 EKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPA 164
           EKEEH    T + NKA R+D      +  +G     K + ++A + F   ++ D +   A
Sbjct: 457 EKEEHDKAITDF-NKAIRLDPTNTWAYFNRGYAWGQKEDYDKAIADFNEAIQLDPNYTSA 515

Query: 165 LLGQACVEFNRGRYSDSLEFYKRALQVHP-SCPGAIRLGIGLCRYKLGQLGKARQAFQRA 223
            L +      +  Y  ++  + +A+++ P + P     G    + K G   KA   +  A
Sbjct: 516 YLNRGYAWSQKNDYDKAIADFNKAIRLDPINAPAYFNRGHAWSQ-KEG-YDKAIADYNEA 573

Query: 224 LQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQ 283
           ++LDP N  A +       +  E     K +     A  I P  A A  Y A    ++ +
Sbjct: 574 IRLDPNNALAYLNRGHARSKTQEH---DKAIADYNEAIRIDPKAANAYIYRA--ITWSRK 628

Query: 284 HFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 324
               + +T+   A+    P  + S+ N   ++  K DY KA
Sbjct: 629 KDYDKAITDFTEAIR-IDPKDASSHSNRGYAWSKKKDYAKA 668


>gi|443325971|ref|ZP_21054641.1| mannosyltransferase OCH1-like enzyme [Xenococcus sp. PCC 7305]
 gi|442794408|gb|ELS03825.1| mannosyltransferase OCH1-like enzyme [Xenococcus sp. PCC 7305]
          Length = 1103

 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 110/493 (22%), Positives = 210/493 (42%), Gaps = 50/493 (10%)

Query: 142 GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSC--PGAI 199
           G +++A   F   LE + ++   L+    ++  + RY+ +LE++++A+ + P+   P   
Sbjct: 156 GALKRAEQHFIQALEYNANHFHTLIHMGILQRKKQRYNLALEYFQKAITIEPTKIEPYLS 215

Query: 200 RLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKG-MEKMQ 258
           RL I LC  K  Q  KA+    + L+  P ++ AL+   V   Q     G RK  +   Q
Sbjct: 216 RLDI-LCHRK--QFKKAKNQINQLLENFPNSISALLKAGVTYRQL----GDRKAALNTFQ 268

Query: 259 RAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSK 318
            A ++ P        L+   F+ GQ   +E+  +    +    P +  +   L   Y  +
Sbjct: 269 EAIKLAPNNQNIKLELSAEQFYQGQ---IEECRKNIQEILEINPKQGGAIIRLGELYRKE 325

Query: 319 GDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCET 378
            +  KA   +  ++ ++N P  F+  +    +++ +LGDF +A  +F K LE   ++   
Sbjct: 326 NNRPKALASFQKAL-DLN-PQSFLANFNVAVELR-ELGDFEAAEQHFIKALEYNKNHFYA 382

Query: 379 LKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTL 438
           L  +G +  +  +   A E  +KA  I+P   +    L ++ +S D G     F  A   
Sbjct: 383 LIHMGILQRKKQKYNLALEYFQKAITIEPTKIEP--HLAKIDVSCDVG----RFHEAENR 436

Query: 439 LKKAGEEVPIEVLNNIGVIHFEK--GEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDAS 496
           LK   ++ P E + +I   HF +  G+ E A +          W  L   + K+      
Sbjct: 437 LKVLQQKYPEEYIISIFSGHFARKLGQEEKALE----------WFCLAQKQAKSKDQKLE 486

Query: 497 ASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNL----------ARLLEQIHDTVAASV 546
           A +L+ + +      EN  N VE      T+L               +LE+  + + A+ 
Sbjct: 487 AKILKIETLTNLKSLENVANPVE------TILVEFPDDLRSQMLQGLILEKKLNLIEAAK 540

Query: 547 LYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKN 606
           +Y+ +L    +++   ++LA +      +  SI L+ E  ++ G   N    LG +    
Sbjct: 541 VYQNVLATNPNHLQVSIKLARVYSQSAQIPASINLLEETYQILGANLNVFIELGSIYQAL 600

Query: 607 DDWVKAKETFRAA 619
           ++W  A + +  A
Sbjct: 601 ENWDLASQWYEKA 613



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 92/368 (25%), Positives = 158/368 (42%), Gaps = 56/368 (15%)

Query: 129 STWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRA 188
           S W+  G +    G+ + A + F+  ++ +  N    L  A  + + G+  +  +  +  
Sbjct: 41  SGWIALGLIYRQSGDHQLALNTFQKAIKIEPRNTKVKLELAAEQLHYGQIKECSQNIQEV 100

Query: 189 LQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAA 248
           L ++P+   A      L R +  +  KA  +FQ+AL L+P++  A   +AV   +  E  
Sbjct: 101 LAINPNHEIAFVKQGELNRSQ-NKRRKALASFQKALDLNPQSFLANFNVAV---ELRELG 156

Query: 249 GIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLV--------EQLTETAL----- 295
            +++  +   +A E          Y ANHF     H L+        +Q    AL     
Sbjct: 157 ALKRAEQHFIQALE----------YNANHF-----HTLIHMGILQRKKQRYNLALEYFQK 201

Query: 296 AVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFP-----YYGLGQ 350
           A+T   PTK   Y +       +  ++KA         +IN+  E  FP         G 
Sbjct: 202 AITIE-PTKIEPYLSRLDILCHRKQFKKAK-------NQINQLLEN-FPNSISALLKAGV 252

Query: 351 VQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDA 410
              +LGD ++AL  F++ +++ P+N      L       GQIE+ ++ +++  +I+P+  
Sbjct: 253 TYRQLGDRKAALNTFQEAIKLAPNNQNIKLELSAEQFYQGQIEECRKNIQEILEINPKQG 312

Query: 411 QAFIDLGELL-ISSDTGAALDAFKTARTLLKKAGEEVPIEVLN--NIGVIHFEKGEFESA 467
            A I LGEL    ++   AL +F+ A  L        P   L   N+ V   E G+FE+A
Sbjct: 313 GAIIRLGELYRKENNRPKALASFQKALDL-------NPQSFLANFNVAVELRELGDFEAA 365

Query: 468 HQSFKDAL 475
            Q F  AL
Sbjct: 366 EQHFIKAL 373



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 96/414 (23%), Positives = 174/414 (42%), Gaps = 81/414 (19%)

Query: 331 SVKEINK-----PHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 385
           S+ EINK     P+ F+  +  LG +  + GD + AL  F+K ++I P N +    L   
Sbjct: 25  SITEINKLLLDFPN-FVSGWIALGLIYRQSGDHQLALNTFQKAIKIEPRNTKVKLELAAE 83

Query: 386 YVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDT-GAALDAFKTARTL------ 438
            +  GQI++  + +++   I+P    AF+  GEL  S +    AL +F+ A  L      
Sbjct: 84  QLHYGQIKECSQNIQEVLAINPNHEIAFVKQGELNRSQNKRRKALASFQKALDLNPQSFL 143

Query: 439 --------------LKKAGEEV---------PIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
                         LK+A +               L ++G++  +K  +  A + F+ A 
Sbjct: 144 ANFNVAVELRELGALKRAEQHFIQALEYNANHFHTLIHMGILQRKKQRYNLALEYFQKA- 202

Query: 476 GDGIWLTLLDSKTKTYV--IDASASMLQFKDM--QLFHRFENDGNHVELPWNKVTVLFNL 531
                +T+  +K + Y+  +D      QFK    Q+    EN       P N ++ L   
Sbjct: 203 -----ITIEPTKIEPYLSRLDILCHRKQFKKAKNQINQLLEN------FP-NSISALLKA 250

Query: 532 ARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAA-------IAKARNNLQLSIELVNE 584
                Q+ D  AA   ++  +    +  +  L L+A       I + R N+Q       E
Sbjct: 251 GVTYRQLGDRKAALNTFQEAIKLAPNNQNIKLELSAEQFYQGQIEECRKNIQ-------E 303

Query: 585 ALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALR 644
            L++N K   A+  LG+L  K ++  KA  +F+ A D      S+    L N+N    LR
Sbjct: 304 ILEINPKQGGAIIRLGELYRKENNRPKALASFQKALDLNP--QSF----LANFNVAVELR 357

Query: 645 NEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLF 698
                   E    E A++ + + +  + ++ YA    G++  +K +++++ + F
Sbjct: 358 --------ELGDFEAAEQHFIKALEYNKNHFYALIHMGILQRKKQKYNLALEYF 403


>gi|297538184|ref|YP_003673953.1| hypothetical protein M301_0992 [Methylotenera versatilis 301]
 gi|297257531|gb|ADI29376.1| Tetratricopeptide TPR_2 repeat protein [Methylotenera versatilis
           301]
          Length = 1193

 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 75/319 (23%), Positives = 140/319 (43%), Gaps = 38/319 (11%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
           A +YY KA ++  +        G +L +   +EQA +++K  L  + DNV A+   A V 
Sbjct: 125 AAKYYKKAIKLTPNFAKAHYNLGNVLKSLNSLEQAKASYKCALRIEVDNVQAMCNLAQVL 184

Query: 173 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 232
           + +  +S+++ ++++AL +  +   A  +G+G      GQL  A   F++A+ ++P + E
Sbjct: 185 YEQDFFSEAIIYFQQALSIQDNFSIAY-VGLGAAFQATGQLPGAEANFRKAIAINPNDAE 243

Query: 233 ALVALAVMDLQANEAAGIRKGMEKMQRA--------------FEIYPYCAMALNYLANHF 278
           AL  L           G+ K + ++  A              F+ Y      L  + N  
Sbjct: 244 ALSNL----------GGVLKTLGRLSEAEICYRTLLTITPENFDTYIKLGSLLKSMGNIA 293

Query: 279 FFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKP 338
             T          + AL++ +       +  +L  +   +G Y +A   Y  ++K   +P
Sbjct: 294 ESTA-------CFKKALSINSQ---LEEAQNDLGLALAEQGRYSEAEACYQNAIKI--EP 341

Query: 339 HEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQEL 398
           + F   Y  LG     +G F  A   F+K + +  +       L    V  GQI++A+  
Sbjct: 342 N-FWKAYNNLGLTLYNMGRFNEAEAAFDKAITLDANEALIYSNLSLPLVAQGQIKRAEAC 400

Query: 399 LRKAAKIDPRDAQAFIDLG 417
           LR+A +++P    A+I+LG
Sbjct: 401 LRRAIEVNPEYVNAYINLG 419



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 68/263 (25%), Positives = 116/263 (44%), Gaps = 23/263 (8%)

Query: 343 FPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKA 402
           F +  LG V  +LG F  A    +K  +  P + E    LG+ +    Q++ A +  +KA
Sbjct: 73  FGWKVLGAVFQQLGLFEQAHDALQKAADFLPKDSEAQYNLGNFFYDQQQLDDAAKYYKKA 132

Query: 403 AKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLN-----NIGVI 457
            K+ P  A+A  +LG +L S      L++ + A+   K A   + IEV N     N+  +
Sbjct: 133 IKLTPNFAKAHYNLGNVLKS------LNSLEQAKASYKCA---LRIEVDNVQAMCNLAQV 183

Query: 458 HFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNH 517
            +E+  F  A   F+ AL      ++ D+ +  YV   +A        QL     N    
Sbjct: 184 LYEQDFFSEAIIYFQQAL------SIQDNFSIAYVGLGAAFQ---ATGQLPGAEANFRKA 234

Query: 518 VELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQL 577
           + +  N    L NL  +L+ +     A + YR +L    +  D Y++L ++ K+  N+  
Sbjct: 235 IAINPNDAEALSNLGGVLKTLGRLSEAEICYRTLLTITPENFDTYIKLGSLLKSMGNIAE 294

Query: 578 SIELVNEALKVNGKYPNALSMLG 600
           S     +AL +N +   A + LG
Sbjct: 295 STACFKKALSINSQLEEAQNDLG 317



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 73/309 (23%), Positives = 126/309 (40%), Gaps = 22/309 (7%)

Query: 171 VEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPEN 230
           V FN G   +S +      Q +P      ++ +G    +LG   +A  A Q+A    P++
Sbjct: 47  VMFNNGHLDESKQLALSFTQRYPRDGFGWKV-LGAVFQQLGLFEQAHDALQKAADFLPKD 105

Query: 231 VEALVALAVM---DLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLV 287
            EA   L        Q ++AA   K      +A ++ P  A A   L N          +
Sbjct: 106 SEAQYNLGNFFYDQQQLDDAAKYYK------KAIKLTPNFAKAHYNLGNVLKSLNS---L 156

Query: 288 EQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYG 347
           EQ   +             +  NLA+  + +  + +A +Y+    + ++    F   Y G
Sbjct: 157 EQAKASYKCALRIEVDNVQAMCNLAQVLYEQDFFSEAIIYFQ---QALSIQDNFSIAYVG 213

Query: 348 LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 407
           LG      G    A  NF K + I P++ E L  LG +   LG++ +A+   R    I P
Sbjct: 214 LGAAFQATGQLPGAEANFRKAIAINPNDAEALSNLGGVLKTLGRLSEAEICYRTLLTITP 273

Query: 408 RDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFES 466
            +   +I LG LL S  +   +   FK A ++  +       E  N++G+   E+G +  
Sbjct: 274 ENFDTYIKLGSLLKSMGNIAESTACFKKALSINSQLE-----EAQNDLGLALAEQGRYSE 328

Query: 467 AHQSFKDAL 475
           A   +++A+
Sbjct: 329 AEACYQNAI 337


>gi|392373589|ref|YP_003205422.1| TPR domain-containing protein [Candidatus Methylomirabilis oxyfera]
 gi|258591282|emb|CBE67579.1| putative TPR domain protein [Candidatus Methylomirabilis oxyfera]
          Length = 585

 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 96/391 (24%), Positives = 165/391 (42%), Gaps = 35/391 (8%)

Query: 93  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGK---GQLLLAKGEVEQASS 149
           Y  L  +  + R+ +E    A   Y +A  +D   P + V +   G+L L +G+ EQAS 
Sbjct: 160 YVQLAALYREARKAQE----AIAVYRQALDVD---PGSLVIRYNLGRLYLEEGQSEQASH 212

Query: 150 AFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYK 209
            F+ +LE D    PAL         +G+  ++   Y+RAL   P   G IR  +     +
Sbjct: 213 IFREILERDSAFDPALTALGMSLEAQGKLDEARTMYQRALVDDPRN-GEIRERLAQLLLR 271

Query: 210 LGQLGKARQAFQRALQLDPENVEALVALAVM----DLQANEAAGIRKGMEKMQRAFEIYP 265
             +L  A   ++R L  +P N    + +  +     +        R  + +     E+  
Sbjct: 272 QKELDAALIEYRRLLDQEPNNSSFKLRIGFIYYEKRMYGEAIQAFRDILREESGNHEVRY 331

Query: 266 YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAG 325
           Y  + L     H          E L E A  +    P    + ++       K  Y +AG
Sbjct: 332 YLGLTLEDERRH---------DEALDELA-QIPKDSPRYPDALFHRGYILSQKERYVEAG 381

Query: 326 LYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 385
              + S+    +P+E + PY  LG +  +   +  A+   E+ L + P N   L  LG  
Sbjct: 382 --DLLSIAGSLRPNEGVIPYL-LGLIYFQQKSYPQAIAQLERALGLEPSNAAYLYQLGSA 438

Query: 386 YVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEE 445
           + +  QI+KA+ + R+   +DP+ A A+  LG +   +D G  LD    +  L+KKA E 
Sbjct: 439 FERSRQIDKAETIFRRLLTVDPKHADAYNYLGYMF--ADEGIKLD---ESVALVKKALEL 493

Query: 446 VPIE--VLNNIGVIHFEKGEFESAHQSFKDA 474
            P     ++++G  +++KG  + A    K A
Sbjct: 494 QPDNGAFVDSLGWAYYKKGMVDEALVELKRA 524



 Score = 43.1 bits (100), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 57/223 (25%), Positives = 99/223 (44%), Gaps = 23/223 (10%)

Query: 302 PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSA 361
           P ++ +Y  LA  Y      ++A   Y  ++     P   +   Y LG++ L+ G    A
Sbjct: 154 PVRTETYVQLAALYREARKAQEAIAVYRQALD--VDPGSLVI-RYNLGRLYLEEGQSEQA 210

Query: 362 LTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLI 421
              F ++LE        L ALG      G++++A+ + ++A   DPR+ +    L +LL+
Sbjct: 211 SHIFREILERDSAFDPALTALGMSLEAQGKLDEARTMYQRALVDDPRNGEIRERLAQLLL 270

Query: 422 -SSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDG-- 478
              +  AAL  +   R LL +       ++   IG I++EK  +  A Q+F+D L +   
Sbjct: 271 RQKELDAALIEY---RRLLDQEPNNSSFKL--RIGFIYYEKRMYGEAIQAFRDILREESG 325

Query: 479 -------IWLTLLDSKTKTYVIDASASMLQ----FKDMQLFHR 510
                  + LTL D +     +D  A + +    + D  LFHR
Sbjct: 326 NHEVRYYLGLTLEDERRHDEALDELAQIPKDSPRYPDA-LFHR 367


>gi|145553124|ref|XP_001462237.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124430075|emb|CAK94864.1| unnamed protein product [Paramecium tetraurelia]
          Length = 2950

 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 77/344 (22%), Positives = 155/344 (45%), Gaps = 20/344 (5%)

Query: 135  GQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS 194
            G L + K + + A+ +F+ +L  + ++  AL+  A +   +G +  + ++ K AL+  P+
Sbjct: 2572 GTLYMKKKDFKSAAESFRTLLRINNEHPEALIEYATISSIQGNFEKAKKYLKHALKSSPN 2631

Query: 195  CPGA-IRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKG 253
             P A +RLG  + + KL +L  A + F +  ++DP N +A   +    +Q  E   + KG
Sbjct: 2632 NPVANMRLG-RIYQTKLNELNSAIECFAKVSRVDPTNYKAYYYMGQCYIQKGE---LNKG 2687

Query: 254  MEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLAR 313
            +E M  + +      +A   + N  +   Q     +  + A+   +       +   L  
Sbjct: 2688 IENMNMSLKHNQSFGLAWKAVGNIMYEKNQPAKALRYFQKAI---DSDKNDMEAKIGLGN 2744

Query: 314  SYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYP 373
             Y+ +  +E+A   Y   +  +++  E     Y +        DF  A+ +++K L I P
Sbjct: 2745 CYYLQEQFEQAIQIY-EEISHLDQNEEL---EYNMANCYYMKNDFEEAVLHYQKALSINP 2800

Query: 374  DNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFK 433
            D  E    LG+ Y  + + E+A E   +  K DP+ + AF +        +T   L  ++
Sbjct: 2801 DKIECYYNLGNTYCIMEKFEEALECFERVVKDDPKHSAAFYNYA------NTFFVLQDYE 2854

Query: 434  TARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDAL 475
             A    +KA E  P  ++  N +  ++ EKG+  +A +   +++
Sbjct: 2855 NAAKYFEKAVELQPENVDWRNYVAQLYIEKGDLNAAKRHLDESM 2898



 Score = 53.1 bits (126), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 60/242 (24%), Positives = 111/242 (45%), Gaps = 23/242 (9%)

Query: 201  LGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRA 260
            L I  C  KLG+  KA + ++RA+  + ++      L  M ++  +   +++G++ + +A
Sbjct: 2429 LEIARCYQKLGEFEKAERTYRRAIDANNKDYLPYYKLGWMQIKNKQ---LKEGIDNLSKA 2485

Query: 261  FEIYPYCAMALNYLANHFFFTGQHFLV--EQLT--ETALAVTNHG----PTKSHSYYNLA 312
             +   Y  M +          G+  ++  E  T  + A+ V + G    P        LA
Sbjct: 2486 -QTLDYQNMDI------IIKLGESLMIYDEDPTAVDEAVIVLHKGMIVDPLNYECTNALA 2538

Query: 313  RSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIY 372
            R+Y  KGD   A  Y   + ++   P+     +Y LG + +K  DF+SA  +F  +L I 
Sbjct: 2539 RAYEKKGDLVNAIKYGKLATEQ---PNSNSNSHYFLGTLYMKKKDFKSAAESFRTLLRIN 2595

Query: 373  PDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS--SDTGAALD 430
             ++ E L     I    G  EKA++ L+ A K  P +  A + LG +  +  ++  +A++
Sbjct: 2596 NEHPEALIEYATISSIQGNFEKAKKYLKHALKSSPNNPVANMRLGRIYQTKLNELNSAIE 2655

Query: 431  AF 432
             F
Sbjct: 2656 CF 2657



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 67/298 (22%), Positives = 132/298 (44%), Gaps = 29/298 (9%)

Query: 113  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
            A + + K SR+D      +   GQ  + KGE+ +      + L+ ++    A      + 
Sbjct: 2653 AIECFAKVSRVDPTNYKAYYYMGQCYIQKGELNKGIENMNMSLKHNQSFGLAWKAVGNIM 2712

Query: 173  FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 232
            + + + + +L ++++A+    +   A ++G+G C Y   Q  +A Q ++    LD +N E
Sbjct: 2713 YEKNQPAKALRYFQKAIDSDKNDMEA-KIGLGNCYYLQEQFEQAIQIYEEISHLD-QNEE 2770

Query: 233  ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYP---YCAMALNYLANHFFFTGQHFLVEQ 289
                +A      N+     + +   Q+A  I P    C          ++  G  + + +
Sbjct: 2771 LEYNMANCYYMKND---FEEAVLHYQKALSINPDKIEC----------YYNLGNTYCIME 2817

Query: 290  LTETALA----VTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 345
              E AL     V    P  S ++YN A ++    DYE A  Y+  +V E+ +P    +  
Sbjct: 2818 KFEEALECFERVVKDDPKHSAAFYNYANTFFVLQDYENAAKYFEKAV-EL-QPENVDWRN 2875

Query: 346  YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQ----IEKAQELL 399
            Y + Q+ ++ GD  +A  + ++ + + P N +TL    + Y Q+G     I+KA++ L
Sbjct: 2876 Y-VAQLYIEKGDLNAAKRHLDESMRLQPRNPDTLVRYANYYYQIGNYKEAIQKAKQTL 2932



 Score = 49.7 bits (117), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 90/381 (23%), Positives = 162/381 (42%), Gaps = 54/381 (14%)

Query: 304  KSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALT 363
            ++ SY  +AR Y   G++EKA   Y  ++   NK +    PYY LG +Q+K    +  + 
Sbjct: 2424 RAKSYLEIARCYQKLGEFEKAERTYRRAIDANNKDY---LPYYKLGWMQIKNKQLKEGID 2480

Query: 364  NFEKVLEIYPDNCETLKALGH---IYVQ-LGQIEKAQELLRKAAKIDPRD-------AQA 412
            N  K   +   N + +  LG    IY +    +++A  +L K   +DP +       A+A
Sbjct: 2481 NLSKAQTLDYQNMDIIIKLGESLMIYDEDPTAVDEAVIVLHKGMIVDPLNYECTNALARA 2540

Query: 413  FIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNN---IGVIHFEKGEFESAHQ 469
            +   G+L+ +   G              K   E P    N+   +G ++ +K +F+SA +
Sbjct: 2541 YEKKGDLVNAIKYG--------------KLATEQPNSNSNSHYFLGTLYMKKKDFKSAAE 2586

Query: 470  SFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHV--ELPWNKVTV 527
            SF+        L + +   +  +  A+ S +Q      F + +    H     P N V  
Sbjct: 2587 SFR------TLLRINNEHPEALIEYATISSIQGN----FEKAKKYLKHALKSSPNNPVAN 2636

Query: 528  LFNLARLLEQIHDTVAASV-----LYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELV 582
            +  L R+ +   + + +++     + R+    Y+ Y   Y+    I K    L   IE +
Sbjct: 2637 M-RLGRIYQTKLNELNSAIECFAKVSRVDPTNYKAYY--YMGQCYIQKGE--LNKGIENM 2691

Query: 583  NEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAA 642
            N +LK N  +  A   +G++  + +   KA   F+ A D +D  D  A + LGN  Y   
Sbjct: 2692 NMSLKHNQSFGLAWKAVGNIMYEKNQPAKALRYFQKAID-SDKNDMEAKIGLGNCYYLQE 2750

Query: 643  LRNEKRAPKLEATHLEKAKEL 663
               +      E +HL++ +EL
Sbjct: 2751 QFEQAIQIYEEISHLDQNEEL 2771



 Score = 44.3 bits (103), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 63/291 (21%), Positives = 125/291 (42%), Gaps = 13/291 (4%)

Query: 135  GQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS 194
            G + +++ E ++A   F+I  +  +D   + L  A      G +  +   Y+RA+  +  
Sbjct: 2398 GTIFVSEKEWKRALHHFRIGYQYSQDRAKSYLEIARCYQKLGEFEKAERTYRRAIDANNK 2457

Query: 195  --CPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA-VMDLQANEAAGIR 251
               P      +G  + K  QL +      +A  LD +N++ ++ L   + +   +   + 
Sbjct: 2458 DYLP---YYKLGWMQIKNKQLKEGIDNLSKAQTLDYQNMDIIIKLGESLMIYDEDPTAVD 2514

Query: 252  KGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNL 311
            + +  + +   + P      N LA  +   G   LV  +    LA T    + S+S+Y L
Sbjct: 2515 EAVIVLHKGMIVDPLNYECTNALARAYEKKGD--LVNAIKYGKLA-TEQPNSNSNSHYFL 2571

Query: 312  ARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEI 371
               Y  K D++ A   +   ++  N+  E +  Y  +  +Q   G+F  A    +  L+ 
Sbjct: 2572 GTLYMKKKDFKSAAESFRTLLRINNEHPEALIEYATISSIQ---GNFEKAKKYLKHALKS 2628

Query: 372  YPDNCETLKALGHIY-VQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLI 421
             P+N      LG IY  +L ++  A E   K +++DP + +A+  +G+  I
Sbjct: 2629 SPNNPVANMRLGRIYQTKLNELNSAIECFAKVSRVDPTNYKAYYYMGQCYI 2679



 Score = 42.0 bits (97), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 57/263 (21%), Positives = 106/263 (40%), Gaps = 50/263 (19%)

Query: 227 DPENVEA--LVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQH 284
           D +N+EA  L+A A+ +   N      + +E M RA EI P   + L             
Sbjct: 26  DNQNIEAYNLLAYAIKNDLENTTDAYMRSLEIMHRALEILPNNTLTL------------- 72

Query: 285 FLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFP 344
                                   +N+A +Y+   D+ +A  YY   + +INK +++   
Sbjct: 73  ------------------------FNMASTYYEMQDFPQAINYYQQLI-QINKVNDY-RA 106

Query: 345 YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAK 404
           ++ L     K G+ + AL  +++ +   P+    +    ++ +Q+G+  +A+  L    K
Sbjct: 107 FFNLAMCYEKAGENQQALEMYQQSIRSNPNFSSAVINYSNLLMQMGKQAQARYTLENYLK 166

Query: 405 IDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEF 464
            +  D +A  +L  +L        ++         KK  +   I  + N GV   ++G+ 
Sbjct: 167 NNKGDMRALNNLNIILAEKQIDQKVEEN------FKKINQSGAITSVYNNGVFLSKQGKL 220

Query: 465 ESAHQSFK---DALGDGIWLTLL 484
           + A Q FK   D L D +   LL
Sbjct: 221 QEALQIFKQLVDKLKDEVEEPLL 243


>gi|395212900|ref|ZP_10400010.1| hypothetical protein O71_04708 [Pontibacter sp. BAB1700]
 gi|394456977|gb|EJF11191.1| hypothetical protein O71_04708 [Pontibacter sp. BAB1700]
          Length = 437

 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 65/305 (21%), Positives = 131/305 (42%), Gaps = 14/305 (4%)

Query: 118 NKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK--IVLEADRDNVPALLGQACVEFNR 175
           ++ + ++   P   + +G +   +GE   A   FK  +    DRD++   +G     +  
Sbjct: 90  DQVAEVEPQNPDVLLTRGIIFTQRGEYRDAVDHFKKALAFAEDRDDIYFNIGLTYQSW-- 147

Query: 176 GRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV 235
           G++S ++++YK+ ++++     A++  I  C    G + +    FQ  +  DP +  A  
Sbjct: 148 GKFSSAVKYYKKCIELNVENEAAMQ-EIIYCMEITGTMREELPFFQAFIDKDPYSYVAWF 206

Query: 236 ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETAL 295
            L  +    N+     K +     A  I P    A N +AN + F G++    +  E   
Sbjct: 207 NLGNV---YNKLGSYEKAIAAYDYATIIKPDFITAYNNMANAYVFIGEY---TKAIEAFN 260

Query: 296 AVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKL 355
            +  HG   +  + N+   Y     ++ +  YY    K I+   E    ++G+G V    
Sbjct: 261 GMLEHGSPSAEVFCNIGECYEKMQQWDLSRRYYQ---KAIDLDPEMDEAWFGIGVVLDAQ 317

Query: 356 GDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFID 415
           G +  ++  F+K + +Y D+ +   AL      +G +  A E   +AA+I P D   +++
Sbjct: 318 GKWYESVHFFKKAVTLYDDSVDYWVALASAEYHVGHVVSALESYARAAEIQPEDKDIYLN 377

Query: 416 LGELL 420
              +L
Sbjct: 378 WSIIL 382



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 64/135 (47%), Gaps = 1/135 (0%)

Query: 105 EKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPA 164
           EK + + L+ +YY KA  +D      W G G +L A+G+  ++   FK  +    D+V  
Sbjct: 281 EKMQQWDLSRRYYQKAIDLDPEMDEAWFGIGVVLDAQGKWYESVHFFKKAVTLYDDSVDY 340

Query: 165 LLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRAL 224
            +  A  E++ G    +LE Y RA ++ P     I L   +  Y+ G   +A +    A+
Sbjct: 341 WVALASAEYHVGHVVSALESYARAAEIQPE-DKDIYLNWSIILYEQGNFEEATEIILNAI 399

Query: 225 QLDPENVEALVALAV 239
           +L P+  E    LA+
Sbjct: 400 ELQPDEAELYYRLAL 414



 Score = 43.5 bits (101), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 51/224 (22%), Positives = 87/224 (38%), Gaps = 47/224 (20%)

Query: 308 YYNLARSYHSKGDYEKAGLYYM----------ASVKEI---------------------- 335
           Y+N+  +Y S G +  A  YY           A+++EI                      
Sbjct: 137 YFNIGLTYQSWGKFSSAVKYYKKCIELNVENEAAMQEIIYCMEITGTMREELPFFQAFID 196

Query: 336 NKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKA 395
             P+ ++  ++ LG V  KLG +  A+  ++    I PD       + + YV +G+  KA
Sbjct: 197 KDPYSYV-AWFNLGNVYNKLGSYEKAIAAYDYATIIKPDFITAYNNMANAYVFIGEYTKA 255

Query: 396 QELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLNN 453
            E      +     A+ F ++GE          +  +  +R   +KA +  P   E    
Sbjct: 256 IEAFNGMLEHGSPSAEVFCNIGECY------EKMQQWDLSRRYYQKAIDLDPEMDEAWFG 309

Query: 454 IGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASA 497
           IGV+   +G++  +   FK A      +TL D     +V  ASA
Sbjct: 310 IGVVLDAQGKWYESVHFFKKA------VTLYDDSVDYWVALASA 347


>gi|428312973|ref|YP_007123950.1| serine/threonine protein kinase [Microcoleus sp. PCC 7113]
 gi|428254585|gb|AFZ20544.1| serine/threonine protein kinase [Microcoleus sp. PCC 7113]
          Length = 738

 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 78/306 (25%), Positives = 140/306 (45%), Gaps = 25/306 (8%)

Query: 117 YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 176
           Y+KA +I       W+G+G  L +  + ++A ++F   LE   D++ A   +  V+    
Sbjct: 424 YDKAIQIQPDYAEAWIGRGNALDSLQQYKEAINSFDRALEFKSDSLEAWNNKGNVQIKLQ 483

Query: 177 RYSDSLEFYKRALQVHPS-CPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV 235
           +YSD++  + +A+++ P+  P     G  L  + L Q  +A +++ +A++  P+   A  
Sbjct: 484 KYSDAIASFDKAIELQPNYAPTWNHRGWAL--HNLRQYEEAVKSYNKAVEYQPDFPNAWY 541

Query: 236 --ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTET 293
               A+++LQ  + A     +E   +A +  P    A       ++  G   L  +  E 
Sbjct: 542 QRGNALINLQKYQEA-----VESYDKAVQFQPNFYKA-------WYSRGSALLNLRQYEQ 589

Query: 294 ALAVTNHG----PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLG 349
           A A  +      P  S ++YN   S H    Y++A   Y  +++   K   F    Y LG
Sbjct: 590 AFASFDQAVKFNPDDSEAWYNRGWSLHQLQRYQEAVASYNKAIQLRKK---FYQAQYNLG 646

Query: 350 QVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRD 409
            V  KL  ++ A  ++ KVLEI P++ E   + G+  V L + + A +   KA +  P D
Sbjct: 647 NVFYKLKRYQDAFVSYNKVLEIQPNHYEAWYSRGNALVNLKRYQDAIDSYNKALQYKP-D 705

Query: 410 AQAFID 415
            QA  D
Sbjct: 706 YQAAKD 711



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 63/248 (25%), Positives = 111/248 (44%), Gaps = 24/248 (9%)

Query: 177 RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVA 236
           RY D+L  Y RA+++ P    A   G G     L +  +AR A+ +A+Q+ P+  EA + 
Sbjct: 382 RYDDALASYNRAVELKPEYAAAWN-GKGNTLLALKRYEEARNAYDKAIQIQPDYAEAWIG 440

Query: 237 L--AVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETA 294
              A+  LQ       ++ +    RA E       A N   N      ++       + A
Sbjct: 441 RGNALDSLQQ-----YKEAINSFDRALEFKSDSLEAWNNKGNVQIKLQKYSDAIASFDKA 495

Query: 295 LAV-TNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEF--IFP--YYGLG 349
           + +  N+ PT +H  + L    H+   YE+A       VK  NK  E+   FP  +Y  G
Sbjct: 496 IELQPNYAPTWNHRGWAL----HNLRQYEEA-------VKSYNKAVEYQPDFPNAWYQRG 544

Query: 350 QVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRD 409
              + L  ++ A+ +++K ++  P+  +   + G   + L Q E+A     +A K +P D
Sbjct: 545 NALINLQKYQEAVESYDKAVQFQPNFYKAWYSRGSALLNLRQYEQAFASFDQAVKFNPDD 604

Query: 410 AQAFIDLG 417
           ++A+ + G
Sbjct: 605 SEAWYNRG 612


>gi|158522428|ref|YP_001530298.1| hypothetical protein Dole_2417 [Desulfococcus oleovorans Hxd3]
 gi|158511254|gb|ABW68221.1| Tetratricopeptide TPR_2 repeat protein [Desulfococcus oleovorans
           Hxd3]
          Length = 762

 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 75/289 (25%), Positives = 129/289 (44%), Gaps = 10/289 (3%)

Query: 131 WVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQ 190
           W   G  L   G  E A  AF+  +  D +++ A      +    GR  ++++F++RAL+
Sbjct: 430 WSNLGMALQIAGNSEAALQAFQKAIALDPNHMEAHNNSGFILRELGRPKEAIKFFRRALE 489

Query: 191 VHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGI 250
           ++P+   A    +GL  + L  + +AR AF++ L+++P   +A   L V+ +Q  +    
Sbjct: 490 INPAYADA-HYNLGLAFFDLKDMAQARTAFEQTLRVNPLYSKAHNNLGVILMQEGDH--- 545

Query: 251 RKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYN 310
              +   QRA +  P  A A N L    +  G         + AL      P  + +  N
Sbjct: 546 EAAVAAYQRALKTDPRFAQAYNNLGIIAYQQGNPDQAASFFKKALTAD---PAYAGAANN 602

Query: 311 LARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLE 370
           LAR    +   EK G       + ++K    +     L QV    G    A++ ++K L 
Sbjct: 603 LARV---RQTIEKHGPAITELKQMLHKTPNDVDLSCRLAQVYQAAGMRYGAISQYQKALA 659

Query: 371 IYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGEL 419
           + P +  +L ALG +Y  +GQ  KA E  RK + + P +A  + +L  L
Sbjct: 660 LQPGHGPSLNALGVLYAAMGQPAKAVECFRKLSALMPGNATIYYNLACL 708



 Score = 47.0 bits (110), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 45/180 (25%), Positives = 81/180 (45%), Gaps = 9/180 (5%)

Query: 297 VTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLG 356
           VT   PT +  + NL  +    G+ E A     A  K I      +  +   G +  +LG
Sbjct: 419 VTEKSPTLARPWSNLGMALQIAGNSEAA---LQAFQKAIALDPNHMEAHNNSGFILRELG 475

Query: 357 DFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDL 416
             + A+  F + LEI P   +    LG  +  L  + +A+    +  +++P  ++A  +L
Sbjct: 476 RPKEAIKFFRRALEINPAYADAHYNLGLAFFDLKDMAQARTAFEQTLRVNPLYSKAHNNL 535

Query: 417 GELLIS-SDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
           G +L+   D  AA+ A++ A     +  +       NN+G+I +++G  + A   FK AL
Sbjct: 536 GVILMQEGDHEAAVAAYQRALKTDPRFAQAY-----NNLGIIAYQQGNPDQAASFFKKAL 590


>gi|124022007|ref|YP_001016314.1| hypothetical protein P9303_02961 [Prochlorococcus marinus str. MIT
           9303]
 gi|123962293|gb|ABM77049.1| Hypothetical protein P9303_02961 [Prochlorococcus marinus str. MIT
           9303]
          Length = 594

 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 72/280 (25%), Positives = 125/280 (44%), Gaps = 14/280 (5%)

Query: 141 KGEVEQASSAFKIVLEAD--RDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGA 198
           +G++E A   ++  +E     + + + LG  C   N  R  +++  Y++A++  P  P A
Sbjct: 44  QGDIENAEYLYRQAIEIGFLHEAIFSNLGVICK--NSDRQEEAIALYEKAIETRPDHPDA 101

Query: 199 IRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQ 258
            R  +G    +LG L +A  A  ++L+L P+N +A + L  +     E   + + +    
Sbjct: 102 YR-NLGNLHKELGNLDQALAATLKSLELKPDNPDAHINLGGI---YKELGNLDQALTSTL 157

Query: 259 RAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSK 318
           ++ E+ P    A   L   +   G    ++Q   + L      P    ++ NL   Y   
Sbjct: 158 KSLELKPDNPTAYMNLGRIYQDLGN---LDQALASTLKSLELKPDNPTAHMNLGIIYRDL 214

Query: 319 GDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCET 378
            + ++A    + S++   KP      Y  LG +   LG+   AL +  K LE+ PDN  T
Sbjct: 215 RNLDQALASSLQSLQL--KPDNHT-AYINLGVIYQDLGNLDQALASTLKSLELKPDNPTT 271

Query: 379 LKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGE 418
              L  IY  LG  ++A   LR+A K D   A+A I L +
Sbjct: 272 QMNLASIYKDLGNFDQALYFLREAEKNDEMKAKASILLAQ 311



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 38/140 (27%), Positives = 60/140 (42%), Gaps = 33/140 (23%)

Query: 312 ARSYHSKGDYEKAGLYYMASVKEINKPHEFIFP--------------------------- 344
           A ++H +GD E A   Y  ++ EI   HE IF                            
Sbjct: 38  AMNFHMQGDIENAEYLYRQAI-EIGFLHEAIFSNLGVICKNSDRQEEAIALYEKAIETRP 96

Query: 345 -----YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELL 399
                Y  LG +  +LG+   AL    K LE+ PDN +    LG IY +LG +++A    
Sbjct: 97  DHPDAYRNLGNLHKELGNLDQALAATLKSLELKPDNPDAHINLGGIYKELGNLDQALTST 156

Query: 400 RKAAKIDPRDAQAFIDLGEL 419
            K+ ++ P +  A+++LG +
Sbjct: 157 LKSLELKPDNPTAYMNLGRI 176



 Score = 43.9 bits (102), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 55/239 (23%), Positives = 99/239 (41%), Gaps = 16/239 (6%)

Query: 93  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 152
           ++ LG I      +EE   L    Y KA       P  +   G L    G ++QA +A  
Sbjct: 68  FSNLGVICKNSDRQEEAIAL----YEKAIETRPDHPDAYRNLGNLHKELGNLDQALAATL 123

Query: 153 IVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQ 212
             LE   DN  A +    +    G    +L    ++L++ P  P A  + +G     LG 
Sbjct: 124 KSLELKPDNPDAHINLGGIYKELGNLDQALTSTLKSLELKPDNPTAY-MNLGRIYQDLGN 182

Query: 213 LGKARQAFQRALQLDPENVEALVALAVM--DLQANEAAGIRKGMEKMQRAFEIYPYCAMA 270
           L +A  +  ++L+L P+N  A + L ++  DL+      + + +    ++ ++ P    A
Sbjct: 183 LDQALASTLKSLELKPDNPTAHMNLGIIYRDLR-----NLDQALASSLQSLQLKPDNHTA 237

Query: 271 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYM 329
              L   +   G    ++Q   + L      P    +  NLA  Y   G++++A LY++
Sbjct: 238 YINLGVIYQDLGN---LDQALASTLKSLELKPDNPTTQMNLASIYKDLGNFDQA-LYFL 292


>gi|72383071|ref|YP_292426.1| TPR repeat-containing protein [Prochlorococcus marinus str. NATL2A]
 gi|72002921|gb|AAZ58723.1| TPR repeat [Prochlorococcus marinus str. NATL2A]
          Length = 909

 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 100/470 (21%), Positives = 195/470 (41%), Gaps = 57/470 (12%)

Query: 140 AKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAI 199
           ++G +++A+  ++  +     +         +  + G   D+  + ++A++++P+   A 
Sbjct: 80  SQGNIKEAAKNYQYFINQGFSDHMVFSNYGAILRDLGNLQDAELYTRKAIKINPNYALAY 139

Query: 200 RLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQR 259
              +G     LG+   A  ++++A+Q++P   +A   L ++     E   ++      ++
Sbjct: 140 S-NLGNVLKDLGKSQDAELSYRKAIQINPNYADAHYNLGII---LKELGNLQDAELSYRK 195

Query: 260 AFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 319
           A +I P  A A + L N           E     A+ +    P+ + +Y NL       G
Sbjct: 196 AIQINPNYADAYSNLGNVLKDLDNLQDAELSYRKAIQIN---PSYADAYSNLGNVLKDLG 252

Query: 320 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 379
           + + A L Y  ++ +IN   ++   ++ LG +   LG  + A  ++ K ++I  D  E  
Sbjct: 253 NLQDAELSYRKAI-QINP--DYAEAHFNLGNLLKDLGKLQDAELSYRKAIQIKSDYAEAH 309

Query: 380 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLL 439
             LG I   LG ++ A+   RKA +I P  A+A  +LG  +I  D G   DA  + R   
Sbjct: 310 YNLGIILKDLGNLQDAEFYNRKAIQIKPDYAEAHFNLG--IILKDLGNLQDAEFSYRQ-- 365

Query: 440 KKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASM 499
                   I++          K ++  A+ +  + L D                     +
Sbjct: 366 -------AIQI----------KPDYADAYSNLGNVLKD---------------------L 387

Query: 500 LQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYV 559
            + KD +L +R       +++  +   V  NL  +L+ + +   A   YR  +    DY 
Sbjct: 388 GKLKDAELSYR-----KAIQIKPDYAEVYSNLGNVLKDLGNLQDAEFSYRKAIQIKPDYA 442

Query: 560 DAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDW 609
           DAY  L  I K  +N   +I    +ALK+N +  +A + L   +    DW
Sbjct: 443 DAYSNLGNILKELSNFTDAINQFKDALKLNNELTSAQTGLMSTQGNICDW 492



 Score = 73.2 bits (178), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 82/366 (22%), Positives = 161/366 (43%), Gaps = 20/366 (5%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
           A  Y  KA +I+ +    +   G +L   G+ + A  +++  ++ + +   A      + 
Sbjct: 121 AELYTRKAIKINPNYALAYSNLGNVLKDLGKSQDAELSYRKAIQINPNYADAHYNLGIIL 180

Query: 173 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 232
              G   D+   Y++A+Q++P+   A    +G     L  L  A  ++++A+Q++P   +
Sbjct: 181 KELGNLQDAELSYRKAIQINPNYADAYS-NLGNVLKDLDNLQDAELSYRKAIQINPSYAD 239

Query: 233 ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTE 292
           A   L  +     +   ++      ++A +I P      +Y   HF        + +L +
Sbjct: 240 AYSNLGNV---LKDLGNLQDAELSYRKAIQINP------DYAEAHFNLGNLLKDLGKLQD 290

Query: 293 TALAVTNHGPTKS---HSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLG 349
             L+       KS    ++YNL       G+ + A  Y   + K I    ++   ++ LG
Sbjct: 291 AELSYRKAIQIKSDYAEAHYNLGIILKDLGNLQDAEFY---NRKAIQIKPDYAEAHFNLG 347

Query: 350 QVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRD 409
            +   LG+ + A  ++ + ++I PD  +    LG++   LG+++ A+   RKA +I P  
Sbjct: 348 IILKDLGNLQDAEFSYRQAIQIKPDYADAYSNLGNVLKDLGKLKDAELSYRKAIQIKPDY 407

Query: 410 AQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQ 469
           A+ + +LG +L   D G   DA  + R  ++   +    +  +N+G I  E   F  A  
Sbjct: 408 AEVYSNLGNVL--KDLGNLQDAEFSYRKAIQIKPDYA--DAYSNLGNILKELSNFTDAIN 463

Query: 470 SFKDAL 475
            FKDAL
Sbjct: 464 QFKDAL 469



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 84/342 (24%), Positives = 152/342 (44%), Gaps = 25/342 (7%)

Query: 299 NHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDF 358
           N G +    + N        G+ + A LY   ++K IN    +   Y  LG V   LG  
Sbjct: 96  NQGFSDHMVFSNYGAILRDLGNLQDAELYTRKAIK-INP--NYALAYSNLGNVLKDLGKS 152

Query: 359 RSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGE 418
           + A  ++ K ++I P+  +    LG I  +LG ++ A+   RKA +I+P  A A+ +LG 
Sbjct: 153 QDAELSYRKAIQINPNYADAHYNLGIILKELGNLQDAELSYRKAIQINPNYADAYSNLGN 212

Query: 419 LLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDALG 476
           +L        LD  + A    +KA +  P   +  +N+G +  + G  + A  S++ A  
Sbjct: 213 VL------KDLDNLQDAELSYRKAIQINPSYADAYSNLGNVLKDLGNLQDAELSYRKA-- 264

Query: 477 DGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLE 536
             I +    ++    + +    + + +D +L +R       +++  +     +NL  +L+
Sbjct: 265 --IQINPDYAEAHFNLGNLLKDLGKLQDAELSYR-----KAIQIKSDYAEAHYNLGIILK 317

Query: 537 QIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNAL 596
            + +   A    R  +    DY +A+  L  I K   NLQ +     +A+++   Y +A 
Sbjct: 318 DLGNLQDAEFYNRKAIQIKPDYAEAHFNLGIILKDLGNLQDAEFSYRQAIQIKPDYADAY 377

Query: 597 SMLGDLELKNDDWVKAKETFRAASDATDGKDSYATL--SLGN 636
           S LG++ LK  D  K K+   +   A   K  YA +  +LGN
Sbjct: 378 SNLGNV-LK--DLGKLKDAELSYRKAIQIKPDYAEVYSNLGN 416


>gi|21226703|ref|NP_632625.1| hypothetical protein MM_0601 [Methanosarcina mazei Go1]
 gi|20904990|gb|AAM30297.1| conserved protein [Methanosarcina mazei Go1]
          Length = 1024

 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 82/324 (25%), Positives = 143/324 (44%), Gaps = 35/324 (10%)

Query: 145 EQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIG 204
           E+A  AF+ V+E D +N  AL          GR+++++     AL+++P  PGA     G
Sbjct: 98  EKALEAFRGVIERDPENAGALYYSGLALNQLGRHTEAVSALSEALKINPDNPGAWYYR-G 156

Query: 205 LCRYKLGQLGKARQAFQRALQLDPENV-----------------EALVAL-AVMDLQANE 246
           +  Y LG+  +A +AF++ L L+P +                  EAL A    ++L+ + 
Sbjct: 157 VSLYILGKCMEALEAFEKTLALEPSHAGAWEGKAKAYLSLGRRREALRACEKAIELEPSS 216

Query: 247 AAG------IRKGMEKMQRAFEIYPYCAM-----ALNYLANHFFFTGQHFLVEQLTETAL 295
           A        I KG+ + + A   +    +     A N L             E L E   
Sbjct: 217 AGAWETQGKILKGIGRREEALGAFEKSLILEPMNAENRLEKGRLLGSLGRCGEALLEFE- 275

Query: 296 AVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKL 355
           +V     + + +  N  ++  + G+Y+KA   +  ++KE  +  E    + G+G   L L
Sbjct: 276 SVLQIDSSLTEAKINKGKALLAIGNYQKALDSFSKTLKEGTENSE---SWGGMGSCLLAL 332

Query: 356 GDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFID 415
           G +  A+  +E+ L +  +N  TL  +G IY +LG + +A E   +A  +D  +A A+  
Sbjct: 333 GKYYEAMKAYERALALGTENSCTLSGIGEIYYELGDLTRALEFFEQALSLDIENAFAWNG 392

Query: 416 LGELLIS-SDTGAALDAFKTARTL 438
            G  L        AL+A++   TL
Sbjct: 393 KGNALCKLGKYREALEAYENLLTL 416



 Score = 42.7 bits (99), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 102/445 (22%), Positives = 179/445 (40%), Gaps = 76/445 (17%)

Query: 81  ERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLA 140
           E    L+ +G  Y  LG +             A +++ +A  +D+     W GKG  L  
Sbjct: 351 ENSCTLSGIGEIYYELGDLTR-----------ALEFFEQALSLDIENAFAWNGKGNALCK 399

Query: 141 KGEVEQASSAFKIVLEADRDNVPALLGQACVEFN-RGRYSDSLEF----YKRALQVHPSC 195
            G+  +A  A++ +L  D +++PA   +  V    + R  +S E     ++ A + +   
Sbjct: 400 LGKYREALEAYENLLTLDYESLPARYNKGIVLSRLKARLKNSGESLENQFQTAFKKYLEL 459

Query: 196 PGAI---RLGI------GLCRYKLGQLGKARQAFQRALQLDPENVEALV--ALAVMDLQA 244
            G +   ++G       GL   +LG+  +A +AF RA +  PE +   V   ++++ L+ 
Sbjct: 460 SGKLSENKIGSEGWKCRGLAFAELGEYEEAIKAFDRAAEYSPEYITPAVYKGISLICLKR 519

Query: 245 NEAAGIRKGMEKMQRAFEIYPYCAMA------------------LNYLANHFFFTGQHFL 286
            E A +       ++A EI+ Y  M                   +N+  N   F G+  +
Sbjct: 520 YEEALVL-----FEQAEEIF-YTNMGAEGKGDPDEEKKAEESWMMNFAMN---FAGKKPI 570

Query: 287 VEQLTET-ALAVTNHGPTK-SHSYYNLARSYHSKG--DYEKAGLYYMASVKEINKPHEF- 341
           +E L      A+   G  K +   +  AR     G   +   G+ +    K      EF 
Sbjct: 571 LEILRNAKGFALDALGRYKDAFEAFEDARKVSGNGKISFSGKGIVFAHCGKWKKAIEEFD 630

Query: 342 ----IFPYYGLGQVQ-----LKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQI 392
               + P      V      ++L +F  A    EK+     D+  +L  LG  + + G +
Sbjct: 631 SVLILDPENVPASVMKAFALIRLEEFGKAAEFLEKLTLKDCDSDLSLCLLGFAFSKQGDL 690

Query: 393 EKAQELLRKAAKIDPRDAQAFIDLGEL--LISSDTGAALDAFKTARTLLKKAGEEVPIEV 450
           EKA    RKA + +P++  A   L E+  +I + TG    A K     + +A +      
Sbjct: 691 EKALRAYRKAIEANPKNIHARNGLAEICFIIGNSTG----ALKELEASIAEAPDNAYSRS 746

Query: 451 LNNIGVIHFEKGEFESAHQSFKDAL 475
           L   G +  E+ E E+A  SF+ AL
Sbjct: 747 LK--GRVELEEQECENALDSFRRAL 769



 Score = 42.7 bits (99), Expect = 0.99,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 58/121 (47%), Gaps = 1/121 (0%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
           A   ++K  +       +W G G  LLA G+  +A  A++  L    +N   L G   + 
Sbjct: 304 ALDSFSKTLKEGTENSESWGGMGSCLLALGKYYEAMKAYERALALGTENSCTLSGIGEIY 363

Query: 173 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 232
           +  G  + +LEF+++AL +      A   G G    KLG+  +A +A++  L LD E++ 
Sbjct: 364 YELGDLTRALEFFEQALSLDIENAFAWN-GKGNALCKLGKYREALEAYENLLTLDYESLP 422

Query: 233 A 233
           A
Sbjct: 423 A 423



 Score = 40.8 bits (94), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 56/232 (24%), Positives = 92/232 (39%), Gaps = 46/232 (19%)

Query: 176 GRYSDSLEFYKRALQVHPSCPGAIRL-GIGLCRYKLGQLGKARQAFQRALQLDPENVEAL 234
           GRY D+ E ++ A +V  S  G I   G G+     G+  KA + F   L LDPENV A 
Sbjct: 586 GRYKDAFEAFEDARKV--SGNGKISFSGKGIVFAHCGKWKKAIEEFDSVLILDPENVPAS 643

Query: 235 VALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETA 294
           V  A   ++  E     + +EK+                            L +  ++ +
Sbjct: 644 VMKAFALIRLEEFGKAAEFLEKLT---------------------------LKDCDSDLS 676

Query: 295 LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLK 354
           L +             L  ++  +GD EKA   Y  ++ E N  +  I    GL ++   
Sbjct: 677 LCL-------------LGFAFSKQGDLEKALRAYRKAI-EANPKN--IHARNGLAEICFI 720

Query: 355 LGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKID 406
           +G+   AL   E  +   PDN  +    G + ++  + E A +  R+A  +D
Sbjct: 721 IGNSTGALKELEASIAEAPDNAYSRSLKGRVELEEQECENALDSFRRALTLD 772


>gi|147921574|ref|YP_684609.1| hypothetical protein LRC308 [Methanocella arvoryzae MRE50]
 gi|56295578|emb|CAH04820.1| hypothetical protein orf20 [uncultured archaeon]
 gi|110620005|emb|CAJ35283.1| hypothetical protein LRC308 [Methanocella arvoryzae MRE50]
          Length = 423

 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 77/288 (26%), Positives = 125/288 (43%), Gaps = 16/288 (5%)

Query: 135 GQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS 194
           G+ +LA G  +QA + F    +   +   A  G       +G Y +S+    RA+ V P 
Sbjct: 104 GKAVLATGNPDQALNLFTASKQLGMNESMACCGIGSALAEKGLYRESIVELSRAIAVDPG 163

Query: 195 CPGA-IRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDL--QANEAAGIR 251
              A +RLG+  C  + G   +A    ++A++L+P N+EA + LA   L  Q  +AA   
Sbjct: 164 NVEAYVRLGMACC--ETGSYAEAMAWLKKAVELNPGNIEAHLCLARAYLRGQMYDAA--- 218

Query: 252 KGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNL 311
             + +      + P C  A+N     + + G   L++Q  +      +  P    ++ NL
Sbjct: 219 --LAEYDVVLGLRPRCLDAINGKGTVYHYKG---LIDQAIQEYRHAIDLYPGDYRAHNNL 273

Query: 312 ARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEI 371
           A +Y  KG YE+A   Y  ++    K  E    Y   G + L  GD   A   F + L +
Sbjct: 274 ALAYVDKGMYERAIPEYRLAICASPKLPELHADY---GMLLLLTGDTYGATLAFREALRL 330

Query: 372 YPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGEL 419
            PD+      L     Q GQ   A   L +A ++ P + +AF  LG +
Sbjct: 331 APDSYSGHVNLAVALYQSGQCSDALAELAEAVRLSPSEPEAFFHLGTI 378



 Score = 46.6 bits (109), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 64/317 (20%), Positives = 127/317 (40%), Gaps = 20/317 (6%)

Query: 302 PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSA 361
           P  + ++Y L ++  + G+ ++A   + AS K++           G+G    + G +R +
Sbjct: 94  PGYAEAHYYLGKAVLATGNPDQALNLFTAS-KQLGMNESMAC--CGIGSALAEKGLYRES 150

Query: 362 LTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLI 421
           +    + + + P N E    LG    + G   +A   L+KA +++P + +A + L    +
Sbjct: 151 IVELSRAIAVDPGNVEAYVRLGMACCETGSYAEAMAWLKKAVELNPGNIEAHLCLARAYL 210

Query: 422 SSDT-GAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIW 480
                 AAL  +     L  +      ++ +N  G ++  KG  + A Q ++ A    I 
Sbjct: 211 RGQMYDAALAEYDVVLGLRPRC-----LDAINGKGTVYHYKGLIDQAIQEYRHA----ID 261

Query: 481 LTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLF-NLARLLEQIH 539
           L   D +    +       L + D  ++ R   +         K+  L  +   LL    
Sbjct: 262 LYPGDYRAHNNL------ALAYVDKGMYERAIPEYRLAICASPKLPELHADYGMLLLLTG 315

Query: 540 DTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSML 599
           DT  A++ +R  L    D    ++ LA           ++  + EA++++   P A   L
Sbjct: 316 DTYGATLAFREALRLAPDSYSGHVNLAVALYQSGQCSDALAELAEAVRLSPSEPEAFFHL 375

Query: 600 GDLELKNDDWVKAKETF 616
           G +  +  D VKA   +
Sbjct: 376 GTIHDRCGDPVKAATAY 392



 Score = 39.7 bits (91), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 77/332 (23%), Positives = 132/332 (39%), Gaps = 29/332 (8%)

Query: 145 EQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIG 204
           E    A  I+  A  D++PAL              D +   + A++++P    A  L +G
Sbjct: 25  EHYQRALSIMNSARLDDLPALY-------------DVISLCREAVRLNPDYAEAYCL-LG 70

Query: 205 LCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDL-QANEAAGIRKGMEKMQRAFEI 263
                +GQ G A QA ++A+ L P   EA   L    L   N    +       Q     
Sbjct: 71  AALAGMGQSGDAIQALEKAITLQPGYAEAHYYLGKAVLATGNPDQALNLFTASKQLGMNE 130

Query: 264 YPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEK 323
              C    + LA    +       E + E + A+    P    +Y  L  +    G Y +
Sbjct: 131 SMACCGIGSALAEKGLYR------ESIVELSRAIAVD-PGNVEAYVRLGMACCETGSYAE 183

Query: 324 AGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALG 383
           A + ++    E+N  +  I  +  L +  L+   + +AL  ++ VL + P   + +   G
Sbjct: 184 A-MAWLKKAVELNPGN--IEAHLCLARAYLRGQMYDAALAEYDVVLGLRPRCLDAINGKG 240

Query: 384 HIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAG 443
            +Y   G I++A +  R A  + P D +A  +L   L   D G    A    R L   A 
Sbjct: 241 TVYHYKGLIDQAIQEYRHAIDLYPGDYRAHNNLA--LAYVDKGMYERAIPEYR-LAICAS 297

Query: 444 EEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
            ++P E+  + G++    G+   A  +F++AL
Sbjct: 298 PKLP-ELHADYGMLLLLTGDTYGATLAFREAL 328


>gi|339500052|ref|YP_004698087.1| hypothetical protein Spica_1434 [Spirochaeta caldaria DSM 7334]
 gi|338834401|gb|AEJ19579.1| Tetratricopeptide TPR_2 repeat-containing protein [Spirochaeta
           caldaria DSM 7334]
          Length = 384

 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 83/333 (24%), Positives = 147/333 (44%), Gaps = 21/333 (6%)

Query: 114 TQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEF 173
           +Q  +K  + +  E S    KG  L+ + ++ +A +AF+ +L  D DN  AL+G      
Sbjct: 18  SQEGDKKEKDEFSEISELSKKGYQLIKENKLAEAVAAFEEILAKDPDNNYALVGLGDTSR 77

Query: 174 NRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEA 233
            RG + +++E+Y+R L  HP    A+  G+  C   L Q  KA + +++ L  D  N+  
Sbjct: 78  KRGSFREAVEYYRRCLSHHPGNNYAL-FGLADCYKALNQYQKAIEIWEQYLLHDDRNITV 136

Query: 234 LVALA-----VMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVE 288
           L  +A     V D + ++A  +R  + +M+   E  PY  + L +L  H+ F       +
Sbjct: 137 LTRVADAYRKVRDFRKSKAVYLR--VLEME---ENNPYALIGLGHL--HYDFKEYR---D 186

Query: 289 QLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGL 348
            L      ++ H             + H K      G+ Y     +++ P+ F +  +GL
Sbjct: 187 ALYYWEKMLSLHKDNVDIRVLTSIGNCHRKLKTFAEGVPYFERALKMD-PYNF-YALFGL 244

Query: 349 GQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPR 408
                 +     +L  + K+LE  P N   L   G  Y  +G+ +KA E   +A  I   
Sbjct: 245 ADCFRGMNQQHRSLEYWNKILEQDPRNKVILTRAGDAYRNMGEFDKAAEYYHRALNI--- 301

Query: 409 DAQAFIDLGELLISSDTGAALDAFKTARTLLKK 441
           +   +  LG  +IS   G   DA ++ R L+++
Sbjct: 302 EFDMYAVLGLAVISKMQGKYDDAIESLRRLIQQ 334



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 59/270 (21%), Positives = 115/270 (42%), Gaps = 47/270 (17%)

Query: 143 EVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHP-SCPGAIRL 201
           +  ++ + +  VLE + +N  AL+G   + ++   Y D+L ++++ L +H  +    +  
Sbjct: 149 DFRKSKAVYLRVLEMEENNPYALIGLGHLHYDFKEYRDALYYWEKMLSLHKDNVDIRVLT 208

Query: 202 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 261
            IG C  KL    +    F+RAL++DP N  AL  LA             +GM +  R+ 
Sbjct: 209 SIGNCHRKLKTFAEGVPYFERALKMDPYNFYALFGLA----------DCFRGMNQQHRSL 258

Query: 262 EIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDY 321
           E +                   + ++EQ     + +T  G            +Y + G++
Sbjct: 259 EYW-------------------NKILEQDPRNKVILTRAGD-----------AYRNMGEF 288

Query: 322 EKAGLYYMASVKEINKPHEF-IFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLK 380
           +KA  YY  ++       EF ++   GL  +    G +  A+ +  ++++  P N     
Sbjct: 289 DKAAEYYHRALN-----IEFDMYAVLGLAVISKMQGKYDDAIESLRRLIQQDPKNYRLYI 343

Query: 381 ALGHIYVQLGQIEKAQELLRKAAKIDPRDA 410
            L   +++ G  E+A E+L +  K   R+A
Sbjct: 344 ELADCWIKKGDKERAIEVLAEFQKTGQRNA 373


>gi|365901831|ref|ZP_09439657.1| TPR repeat protein [Bradyrhizobium sp. STM 3843]
 gi|365417441|emb|CCE12199.1| TPR repeat protein [Bradyrhizobium sp. STM 3843]
          Length = 732

 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 100/398 (25%), Positives = 167/398 (41%), Gaps = 41/398 (10%)

Query: 86  LNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVE 145
           LN LGV +   G+ +           LA  +Y++A  +       W  +G LL A G   
Sbjct: 45  LNLLGVIHMARGRNQ-----------LALAHYDRALALRPDFVEAWSNRGALLKAMGRQA 93

Query: 146 QASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGL 205
            A  +F   L    D+   +  +A V    GR+ ++L +Y RAL + P+ P A+    G+
Sbjct: 94  DALDSFDRALALRADHAGVINNRAGVLQELGRFDEALAYYDRALALQPAYPEALN-NRGV 152

Query: 206 CRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYP 265
               LG+  +A +++ +AL L P+ VEALV      L  +E A   + +     A  + P
Sbjct: 153 VLQALGRHVEALESYAKALALRPDFVEALVNRG---LTYSELARFEEALADYDGALALEP 209

Query: 266 YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGP----TKSHSYYNLARSYHSKGDY 321
                LN  A      G+          ALA+    P    ++  + ++L R+  ++ DY
Sbjct: 210 KHVDVLNNRAIALRRLGRPEEALASHSAALALRPKDPKALVSRGLTLHDLKRTEAAQADY 269

Query: 322 EKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKA 381
           ++A          I      +  +   G +  +LG    AL +FE+ L + PDN   L  
Sbjct: 270 DRA----------IALQPGHVDAFVNRGALLHELGRHDEALRSFERALALQPDNVHALTN 319

Query: 382 LGHIYVQLGQIEKAQELLRKAAKIDPRDAQAF----IDLGELLISSDTGAALDAFKTART 437
            G +   L +  +A     +A  I P DA A     + L +L    +  A+ D   +AR 
Sbjct: 320 RGVVLHDLARYGEALADHDQAISIQPGDAAALNNRGVTLHKLRRLEEALASQDQAISAR- 378

Query: 438 LLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
                 ++ P E L N G+I ++   F+ A   +  A+
Sbjct: 379 ------QDYP-EALVNRGIILYDLKRFDEAQADYDRAI 409


>gi|72382931|ref|YP_292286.1| TPR repeat-containing protein [Prochlorococcus marinus str. NATL2A]
 gi|72002781|gb|AAZ58583.1| TPR repeat [Prochlorococcus marinus str. NATL2A]
          Length = 681

 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 79/334 (23%), Positives = 157/334 (47%), Gaps = 18/334 (5%)

Query: 140 AKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAI 199
           ++G + +A+  +K  +     +  A      +  + G+  ++    ++A+++ P    A 
Sbjct: 70  SQGNIPEAAKYYKNFINKGFKDERAFSNYGVILKSLGKLKEAEISTRKAIEIKPDFAKA- 128

Query: 200 RLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQR 259
              +G     LG+L +A  + ++A+++ P+  +A   L  +    N+   +++     ++
Sbjct: 129 HYNLGNILNDLGKLKEAEISTRKAIEIKPDYADAYSNLGNI---LNDLGKLQEAELSYRK 185

Query: 260 AFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 319
           A EI P  A A   L N     G+    E     A+ +    P  + ++YNL    +  G
Sbjct: 186 AIEIKPDYAEAHYNLGNLLKELGKLQEAELSYRKAIEIK---PDFAEAHYNLGNILNDLG 242

Query: 320 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 379
             ++A L Y  ++ EI KP +F   +Y LG +   LG  + A  ++ K +EI PD  E  
Sbjct: 243 KLQEAELSYRKAI-EI-KP-DFAEAHYNLGNILNDLGKLQEAELSYRKAIEIKPDFAEAH 299

Query: 380 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLL 439
             LG++  +LG++++A+   RKA +I P  A+A  +LG LL        L   + A    
Sbjct: 300 YNLGNLLKELGKLQEAELSYRKAIEIKPDFAEAHYNLGNLL------KELGKLQEAELSY 353

Query: 440 KKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSF 471
           +KA E  P   E   N+ ++   +G++++  +++
Sbjct: 354 RKAIEIKPDYAEAFWNLSLLELLQGDYKNGLENY 387



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 88/368 (23%), Positives = 150/368 (40%), Gaps = 53/368 (14%)

Query: 285 FLVEQLTETALAVTNHG--PTKSHSYYNLARSYHSKGDYEKAGLYY-------------- 328
           F +E+  E     TN    P+K     N A  +HS+G+  +A  YY              
Sbjct: 37  FTLEEKKENITINTNTPSQPSKEQ-IINQAIEFHSQGNIPEAAKYYKNFINKGFKDERAF 95

Query: 329 -----------------MASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEI 371
                            +++ K I    +F   +Y LG +   LG  + A  +  K +EI
Sbjct: 96  SNYGVILKSLGKLKEAEISTRKAIEIKPDFAKAHYNLGNILNDLGKLKEAEISTRKAIEI 155

Query: 372 YPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDA 431
            PD  +    LG+I   LG++++A+   RKA +I P  A+A  +LG LL        L  
Sbjct: 156 KPDYADAYSNLGNILNDLGKLQEAELSYRKAIEIKPDYAEAHYNLGNLL------KELGK 209

Query: 432 FKTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTK 489
            + A    +KA E  P   E   N+G I  + G+ + A  S++ A+         D    
Sbjct: 210 LQEAELSYRKAIEIKPDFAEAHYNLGNILNDLGKLQEAELSYRKAIE-----IKPDFAEA 264

Query: 490 TYVIDASASML-QFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLY 548
            Y +    + L + ++ +L +R       +E+  +     +NL  LL+++     A + Y
Sbjct: 265 HYNLGNILNDLGKLQEAELSYR-----KAIEIKPDFAEAHYNLGNLLKELGKLQEAELSY 319

Query: 549 RLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDD 608
           R  +    D+ +A+  L  + K    LQ +     +A+++   Y  A   L  LEL   D
Sbjct: 320 RKAIEIKPDFAEAHYNLGNLLKELGKLQEAELSYRKAIEIKPDYAEAFWNLSLLELLQGD 379

Query: 609 WVKAKETF 616
           +    E +
Sbjct: 380 YKNGLENY 387


>gi|113474349|ref|YP_720410.1| hypothetical protein Tery_0481 [Trichodesmium erythraeum IMS101]
 gi|110165397|gb|ABG49937.1| TPR repeat [Trichodesmium erythraeum IMS101]
          Length = 3145

 Score = 73.6 bits (179), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 81/332 (24%), Positives = 148/332 (44%), Gaps = 18/332 (5%)

Query: 146  QASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGL 205
            +A    +++LE    +   L   A +E   GR   +++   + + ++P    A      L
Sbjct: 1011 EAERICRLILEEKPQDFQVLHLLAVLENLAGRNDIAIQLLNQVINLYPGFTEAYSNLAKL 1070

Query: 206  CRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYP 265
             + K G+L +A   +Q+A+ L+P N      L  + L   E   I   +   +++ EI P
Sbjct: 1071 MK-KEGRLEEAIAHYQKAISLEPNNSSNYSNLGFIFL---EKGQIESAIINSEKSIEINP 1126

Query: 266  YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAG 325
              +   N+  N  F   +   + + +       N  P  + ++ NL   +  KG+  KA 
Sbjct: 1127 NNSQG-NF--NLGFAWAEKGDLSKASTYYQKAINLQPDYAQAHNNLGLIFQEKGNLSKAS 1183

Query: 326  LYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 385
             YY  ++ EIN    +   +  LG + LK G    A+  F K LE+ PD  +    LG +
Sbjct: 1184 NYYQQAL-EINP--NYAEAWCNLGVILLKQGQIELAIEYFRKSLELNPDYAQAYNNLGFV 1240

Query: 386  YVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEE 445
            + + G + KA    ++A +I+P  A+A+ +LG +L            + A    +K+ E 
Sbjct: 1241 FQEKGNLSKASNYYQQALEINPNYAEAWCNLGVVLRKQ------GQIELAIEYFRKSLEL 1294

Query: 446  VPIEVL--NNIGVIHFEKGEFESAHQSFKDAL 475
             P   +  N++GV   E+G F ++  S++ AL
Sbjct: 1295 NPDYAMTHNSLGVTFEEEGNFTASIASYQKAL 1326



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 70/282 (24%), Positives = 129/282 (45%), Gaps = 14/282 (4%)

Query: 93   YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 152
            Y+ L K+  K+   EE    A  +Y KA  ++ +  S +   G + L KG++E A    +
Sbjct: 1064 YSNLAKLMKKEGRLEE----AIAHYQKAISLEPNNSSNYSNLGFIFLEKGQIESAIINSE 1119

Query: 153  IVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQ 212
              +E + +N             +G  S +  +Y++A+ + P    A    +GL   + G 
Sbjct: 1120 KSIEINPNNSQGNFNLGFAWAEKGDLSKASTYYQKAINLQPDYAQA-HNNLGLIFQEKGN 1178

Query: 213  LGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALN 272
            L KA   +Q+AL+++P   EA   L V+ L+  +   I   +E  +++ E+ P  A A N
Sbjct: 1179 LSKASNYYQQALEINPNYAEAWCNLGVILLKQGQ---IELAIEYFRKSLELNPDYAQAYN 1235

Query: 273  YLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASV 332
             L   F   G         + AL +    P  + ++ NL      +G  E A  Y+  S+
Sbjct: 1236 NLGFVFQEKGNLSKASNYYQQALEIN---PNYAEAWCNLGVVLRKQGQIELAIEYFRKSL 1292

Query: 333  KEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPD 374
             E+N   ++   +  LG    + G+F +++ +++K LE+ P+
Sbjct: 1293 -ELNP--DYAMTHNSLGVTFEEEGNFTASIASYQKALELEPN 1331



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 51/195 (26%), Positives = 85/195 (43%), Gaps = 21/195 (10%)

Query: 216  ARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLA 275
            A Q   + + L+P   +A   LA +     +   + + +   Q+A E+ P  +   + L 
Sbjct: 1697 AIQLLNQVINLNPGFTKAYSNLAKL---MKKEGRLEEAIAHYQKAIELEPNNSSNYSSLG 1753

Query: 276  NHFFFTGQHFLVEQLTETALAVTNH------GPTKSHSYYNLARSYHSKGDYEKAGLYYM 329
              F   GQ           LA+ N+       P  S    NL   +   G+  KA  YY 
Sbjct: 1754 WIFLQKGQ---------IDLAIINYKKSRKINPNSSWININLGFVWEKNGNLPKANTYYQ 1804

Query: 330  ASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQL 389
             ++ EI+  H     +  LG +  K G F  A+   +K LE+ PD  E   +LG+I+ QL
Sbjct: 1805 KAI-EIHPNHAEA--WCRLGNILQKQGQFELAIEYCQKSLELNPDYIEANHSLGYIFFQL 1861

Query: 390  GQIEKAQELLRKAAK 404
            G++ ++Q+   +A K
Sbjct: 1862 GKLAESQKYYEQAIK 1876



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 65/135 (48%), Gaps = 8/135 (5%)

Query: 335  INKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK 394
            IN    F   Y  L ++  K G    A+ +++K +E+ P+N     +LG I++Q GQI+ 
Sbjct: 1705 INLNPGFTKAYSNLAKLMKKEGRLEEAIAHYQKAIELEPNNSSNYSSLGWIFLQKGQIDL 1764

Query: 395  AQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLN 452
            A    +K+ KI+P  +   I+LG   +    G        A T  +KA E  P   E   
Sbjct: 1765 AIINYKKSRKINPNSSWININLG--FVWEKNG----NLPKANTYYQKAIEIHPNHAEAWC 1818

Query: 453  NIGVIHFEKGEFESA 467
             +G I  ++G+FE A
Sbjct: 1819 RLGNILQKQGQFELA 1833



 Score = 49.3 bits (116), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 56/210 (26%), Positives = 98/210 (46%), Gaps = 9/210 (4%)

Query: 208  YKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYC 267
            Y+   L +A +  +  L+  P++ + L  LAV++   N A      ++ + +   + P  
Sbjct: 1655 YQQNNLVEAERICRLILEEKPQDFQVLNLLAVLE---NLAGRNDIAIQLLNQVINLNPGF 1711

Query: 268  AMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLY 327
              A + LA      G+  L E +     A+    P  S +Y +L   +  KG  + A + 
Sbjct: 1712 TKAYSNLAKLMKKEGR--LEEAIAHYQKAIELE-PNNSSNYSSLGWIFLQKGQIDLAIIN 1768

Query: 328  YMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYV 387
            Y  S ++IN    +I     LG V  K G+   A T ++K +EI+P++ E    LG+I  
Sbjct: 1769 YKKS-RKINPNSSWI--NINLGFVWEKNGNLPKANTYYQKAIEIHPNHAEAWCRLGNILQ 1825

Query: 388  QLGQIEKAQELLRKAAKIDPRDAQAFIDLG 417
            + GQ E A E  +K+ +++P   +A   LG
Sbjct: 1826 KQGQFELAIEYCQKSLELNPDYIEANHSLG 1855



 Score = 48.9 bits (115), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 52/256 (20%), Positives = 109/256 (42%), Gaps = 38/256 (14%)

Query: 112  LATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACV 171
            +A Q  N+   ++      +    +L+  +G +E+A + ++  +E + +N         +
Sbjct: 1696 IAIQLLNQVINLNPGFTKAYSNLAKLMKKEGRLEEAIAHYQKAIELEPNNSSNYSSLGWI 1755

Query: 172  EFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENV 231
               +G+   ++  YK++ +++P+    I + +G    K G L KA   +Q+A+++ P + 
Sbjct: 1756 FLQKGQIDLAIINYKKSRKINPNS-SWININLGFVWEKNGNLPKANTYYQKAIEIHPNHA 1814

Query: 232  EALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYL-ANHFFFTGQHFLVEQL 290
            EA   L  + LQ  +       +E  Q++ E+ P      +Y+ ANH             
Sbjct: 1815 EAWCRLGNI-LQ--KQGQFELAIEYCQKSLELNP------DYIEANH------------- 1852

Query: 291  TETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQ 350
                        +  + ++ L +   S+  YE+A   Y     E+N  H  +  ++GL  
Sbjct: 1853 ------------SLGYIFFQLGKLAESQKYYEQAIKKYYEQAIELNTNH--VNAHFGLAN 1898

Query: 351  VQLKLGDFRSALTNFE 366
              LK G+F    + +E
Sbjct: 1899 ALLKQGNFIPGFSKYE 1914



 Score = 48.1 bits (113), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 50/88 (56%), Gaps = 2/88 (2%)

Query: 345 YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAK 404
           ++ LG +    G F +A+ +++K LEI P+N E   +LG I ++LG++ ++Q+  ++A K
Sbjct: 115 WHNLGLILRDKGQFEAAIEHYQKSLEIKPNNAEVYHSLGTISLELGKLSESQKYYQEALK 174

Query: 405 IDPRDAQAFIDLGELLISSDTGAALDAF 432
           +D     A   L  +L+    G+ +  F
Sbjct: 175 LDKNYLNAHFGLAAVLLKQ--GSLMQGF 200



 Score = 47.0 bits (110), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 46/202 (22%), Positives = 88/202 (43%), Gaps = 10/202 (4%)

Query: 165 LLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRAL 224
           LL  A  ++    + ++ E     +Q  P+C  A  + + LC  K  ++  A   +Q+A+
Sbjct: 511 LLTIALEKYQVENWKEAEEICHFIIQKQPNCTSAFEI-LALCAKKTDKIDLAIVYYQKAI 569

Query: 225 QLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQH 284
            L+P N +  + LA++     +   + + +   QRA E+ P  A   + L   F   G  
Sbjct: 570 NLNPNNYKTHLGLAIV---LKKQQKLDEAIVHNQRAIELKPNEASGWHNLGVIFKIQGNI 626

Query: 285 FLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFP 344
                  + +L +    P  ++ YY+ A     +G+  +A + Y   + E+N  H  I  
Sbjct: 627 PEAICCYQKSLEIQ---PNNTYIYYSWANILKQQGNLTEAKVLYEKCI-ELNPNH--INA 680

Query: 345 YYGLGQVQLKLGDFRSALTNFE 366
           ++  G + LK GD     + +E
Sbjct: 681 HFARGFIILKQGDLLVGFSEYE 702



 Score = 45.8 bits (107), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 83/170 (48%), Gaps = 7/170 (4%)

Query: 93   YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 152
            Y+ L K+  K+   EE    A  +Y KA  ++ +  S +   G + L KG+++ A   +K
Sbjct: 1715 YSNLAKLMKKEGRLEE----AIAHYQKAIELEPNNSSNYSSLGWIFLQKGQIDLAIINYK 1770

Query: 153  IVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGA-IRLGIGLCRYKLG 211
               + + ++    +    V    G    +  +Y++A+++HP+   A  RLG  L   K G
Sbjct: 1771 KSRKINPNSSWININLGFVWEKNGNLPKANTYYQKAIEIHPNHAEAWCRLGNIL--QKQG 1828

Query: 212  QLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 261
            Q   A +  Q++L+L+P+ +EA  +L  +  Q  + A  +K  E+  + +
Sbjct: 1829 QFELAIEYCQKSLELNPDYIEANHSLGYIFFQLGKLAESQKYYEQAIKKY 1878



 Score = 43.5 bits (101), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 89/409 (21%), Positives = 159/409 (38%), Gaps = 46/409 (11%)

Query: 344  PYYGLGQV--QLKLGDFRSALTNFEKVLEIYPDNCETLKAL------GHIYVQLGQIEKA 395
            P+Y   ++  Q K+GD+ S L   ++ L  + ++ + L  L       + Y Q   + +A
Sbjct: 953  PWYPTMRLFRQPKIGDWNSVLIEVKEALMEFIESQKNLPDLPANFENAYQYYQQNNLVEA 1012

Query: 396  QELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLNN 453
            + + R   +  P+D Q       LL   +  A  +    A  LL +     P   E  +N
Sbjct: 1013 ERICRLILEEKPQDFQVL----HLLAVLENLAGRN--DIAIQLLNQVINLYPGFTEAYSN 1066

Query: 454  IGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFEN 513
            +  +  ++G  E A   ++ A+      +L  + +  Y   ++   +  +  Q+     N
Sbjct: 1067 LAKLMKKEGRLEEAIAHYQKAI------SLEPNNSSNY---SNLGFIFLEKGQIESAIIN 1117

Query: 514  DGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARN 573
                +E+  N     FNL     +  D   AS  Y+  +    DY  A+  L  I + + 
Sbjct: 1118 SEKSIEINPNNSQGNFNLGFAWAEKGDLSKASTYYQKAINLQPDYAQAHNNLGLIFQEKG 1177

Query: 574  NLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDAT-DGKDSYATL 632
            NL  +     +AL++N  Y  A   LG + LK      A E FR + +   D   +Y  L
Sbjct: 1178 NLSKASNYYQQALEINPNYAEAWCNLGVILLKQGQIELAIEYFRKSLELNPDYAQAYNNL 1237

Query: 633  SLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFD 692
                   F            E  +L KA   Y + +  + +   A    GVVL ++GQ +
Sbjct: 1238 GF----VFQ-----------EKGNLSKASNYYQQALEINPNYAEAWCNLGVVLRKQGQIE 1282

Query: 693  VSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCL 741
            ++ + F +  E               +L   +  +GNF  ++  YQ  L
Sbjct: 1283 LAIEYFRKSLELNPDYAMTHN-----SLGVTFEEEGNFTASIASYQKAL 1326


>gi|427715575|ref|YP_007063569.1| hypothetical protein Cal7507_0234 [Calothrix sp. PCC 7507]
 gi|427348011|gb|AFY30735.1| Tetratricopeptide TPR_1 repeat-containing protein [Calothrix sp.
           PCC 7507]
          Length = 607

 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 78/294 (26%), Positives = 133/294 (45%), Gaps = 19/294 (6%)

Query: 141 KGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG--RYSDSLEFYKRALQVHPSCPGA 198
           +GE E+A + +   +E D D   A   +A +  + G   Y  ++  Y RALQ++P+   A
Sbjct: 16  QGEFEEAIAYYTQAIELDPDYAEAYHNRAII-LSSGIKDYHGAIADYNRALQINPNFAEA 74

Query: 199 IRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAG-IRKGMEKM 257
                   RY L     A   + RALQ++P   E+         +A++A G     +   
Sbjct: 75  YS-NRANARYFLEDYQGAIADYNRALQINPHLSESYHGRG----KASKALGDYETAIADY 129

Query: 258 QRAFEIYPYCAMALNY-LANHFFFTGQHFLVEQLTETALAVTNHG----PTKSHSYYNLA 312
           ++A +I P     +N  +AN +   G     +   + A+A  N      P  + +Y N  
Sbjct: 130 RQALQINPQLTSYINIDIANAYHNQGVSRCDQGDNQGAIADFNQALQLHPHFAAAYSNRG 189

Query: 313 RSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIY 372
            +YH  GDY +A      ++K   K  E    Y+ LG     LGD++SA+ N+ + LEI 
Sbjct: 190 NAYHLLGDYHQAIADQNQALKLEPKLAE---AYHNLGNAYYSLGDYQSAIANYNRALEIK 246

Query: 373 PDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTG 426
           P+        G ++  + + ++A     +A K++P D QA+ + G  L+ S  G
Sbjct: 247 PEFAGAYYNRGLVFAHIKEYDQALADFSEAVKLNPDDVQAYCERG--LVHSSLG 298



 Score = 48.5 bits (114), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 82/368 (22%), Positives = 139/368 (37%), Gaps = 53/368 (14%)

Query: 117 YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 176
           YN+A  I       +  +G +     E +QA + F   ++ + D+V A   +  V  + G
Sbjct: 239 YNRALEIKPEFAGAYYNRGLVFAHIKEYDQALADFSEAVKLNPDDVQAYCERGLVHSSLG 298

Query: 177 RYSDSLEFYKRALQVHPSCP-----------------GAIR-----------LGIGLC-- 206
            Y  ++  Y +ALQ +P+                   GAI            L  G C  
Sbjct: 299 NYQGAIADYDQALQKNPTLGLVYGFRANAKRRLADYQGAIEDSTRLLRLNPLLAEGYCDR 358

Query: 207 ---RYKLGQLGKARQAFQRALQLDPENVEA-----LVALAVMDLQANEAAGIRKGMEKMQ 258
              R  LG    A + + RAL  D     A     +V  A+ D Q        + +    
Sbjct: 359 AVARRSLGDYQGAIKDYDRALLFDANLAAAYYGRGIVYEAMQDYQ--------RAIADNT 410

Query: 259 RAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSK 318
           +A +I P  + A     N     G           AL +    P    +YYN A   ++ 
Sbjct: 411 QAIKIEPNFSPAYCNRGNARRLLGDEQGAIADYNQALQIN---PDFGEAYYNRASIRYAL 467

Query: 319 GDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCET 378
            DY  A   Y  +++    PH   F Y   G     L D++ A+ ++ + + + P   + 
Sbjct: 468 KDYRGAIADYTQALRL--NPHSAAF-YSDRGNAHYALEDYQGAIADYNQAIALEPSFADD 524

Query: 379 LKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTART 437
               G     LG ++ A   L++A ++ P  A+A+I   ++  +  DT  A+  F+ +  
Sbjct: 525 WFNRGRSRSLLGDLQGALVDLKQALELQPHWAEAYIVRADVYRNLGDTQKAIADFQASAD 584

Query: 438 LLKKAGEE 445
           L  K G +
Sbjct: 585 LYYKQGNK 592



 Score = 45.4 bits (106), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 60/280 (21%), Positives = 114/280 (40%), Gaps = 54/280 (19%)

Query: 204 GLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRK---GMEKMQRA 260
           GL +   G+  +A   + +A++LDP+  EA    A++      ++GI+     +    RA
Sbjct: 10  GLNKNFQGEFEEAIAYYTQAIELDPDYAEAYHNRAII-----LSSGIKDYHGAIADYNRA 64

Query: 261 FEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGD 320
            +I P  A A +  AN  +F   +         AL +    P  S SY+   ++  + GD
Sbjct: 65  LQINPNFAEAYSNRANARYFLEDYQGAIADYNRALQIN---PHLSESYHGRGKASKALGD 121

Query: 321 YEKAGLYYMASVKEINKPHEFIF-----PYYGLGQVQLKLGDFRSALTNFEKVLEIYPDN 375
           YE A   Y  +++   +   +I       Y+  G  +   GD + A+ +F + L+++P  
Sbjct: 122 YETAIADYRQALQINPQLTSYINIDIANAYHNQGVSRCDQGDNQGAIADFNQALQLHPHF 181

Query: 376 CETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTA 435
                  G+ Y  LG   +A     +A K++P+ A+A+                      
Sbjct: 182 AAAYSNRGNAYHLLGDYHQAIADQNQALKLEPKLAEAY---------------------- 219

Query: 436 RTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
                           +N+G  ++  G+++SA  ++  AL
Sbjct: 220 ----------------HNLGNAYYSLGDYQSAIANYNRAL 243



 Score = 40.8 bits (94), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 80/360 (22%), Positives = 143/360 (39%), Gaps = 46/360 (12%)

Query: 47  AREYFKQGKVEQFRQILEEG-----SSPEIDEYYADVRYERIAILNALGVYYTYLGKIET 101
           A + F QG  + F+   EE       + E+D  YA+  + R  IL++ G+   Y G I  
Sbjct: 3   AEDLFNQGLNKNFQGEFEEAIAYYTQAIELDPDYAEAYHNRAIILSS-GIK-DYHGAIAD 60

Query: 102 KQREKEEHFILATQY-------------------YNKASRIDMHEPSTWVGKGQLLLAKG 142
             R  + +   A  Y                   YN+A +I+ H   ++ G+G+   A G
Sbjct: 61  YNRALQINPNFAEAYSNRANARYFLEDYQGAIADYNRALQINPHLSESYHGRGKASKALG 120

Query: 143 EVEQASSAFKIVLEADR--------DNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS 194
           + E A + ++  L+ +         D   A   Q     ++G    ++  + +ALQ+HP 
Sbjct: 121 DYETAIADYRQALQINPQLTSYINIDIANAYHNQGVSRCDQGDNQGAIADFNQALQLHPH 180

Query: 195 CPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGM 254
              A     G   + LG   +A     +AL+L+P+  EA   L        +    +  +
Sbjct: 181 FAAAYS-NRGNAYHLLGDYHQAIADQNQALKLEPKLAEAYHNLGNAYYSLGD---YQSAI 236

Query: 255 EKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARS 314
               RA EI P  A A  Y      F       + L + + AV  + P    +Y      
Sbjct: 237 ANYNRALEIKPEFAGA--YYNRGLVFAHIKEYDQALADFSEAVKLN-PDDVQAYCERGLV 293

Query: 315 YHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGL-GQVQLKLGDFRSALTNFEKVLEIYP 373
           + S G+Y+ A    +A   +  + +  +   YG     + +L D++ A+ +  ++L + P
Sbjct: 294 HSSLGNYQGA----IADYDQALQKNPTLGLVYGFRANAKRRLADYQGAIEDSTRLLRLNP 349


>gi|116622427|ref|YP_824583.1| hypothetical protein Acid_3324 [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116225589|gb|ABJ84298.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Solibacter
           usitatus Ellin6076]
          Length = 783

 Score = 73.2 bits (178), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 74/340 (21%), Positives = 136/340 (40%), Gaps = 48/340 (14%)

Query: 136 QLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSC 195
           QL + +GE E A    + +L+ D+ NV A L ++     + ++ DS       L+ +P  
Sbjct: 434 QLQVTRGEFEAALKTAEEILKFDKGNVNARLIESAALMGQKKFGDSRVMLDAMLKTNPGS 493

Query: 196 PGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGME 255
           P  +   +G+      +  +A  +F+RA QL+P N   L+ +   ++  N+     + ++
Sbjct: 494 PDVL-FQLGVVNLAENKFKEAEDSFRRAYQLNPANSRGLMGIVETNMAQNKT---EEAVK 549

Query: 256 KMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSY 315
            +Q   +  P     L  L N     G++    Q     L  T+ G  +   Y  L  +Y
Sbjct: 550 LLQAESDKSPNRTDLLTALGNTAVRAGKYDFAIQTFNRVLEQTDKGKAQGDIYLRLGETY 609

Query: 316 HSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDN 375
             KG                                     D   A+   +K  E  PDN
Sbjct: 610 RRKG-------------------------------------DLNGAIQALQKARESLPDN 632

Query: 376 CETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTA 435
              L  L  +     +  +A+++     K+DP +A A  +L  ++  +++G  LD    A
Sbjct: 633 IIVLSTLALVLDAASRRPEAKQVYEATIKLDPNNAVALNNLAFMM--AESGGDLD---EA 687

Query: 436 RTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKD 473
            T  ++A + +P   E+ + +G I+ +K    +A   FKD
Sbjct: 688 LTKAQRAKQLLPNLFEISDTLGWIYLKKNLAANAIDIFKD 727



 Score = 43.1 bits (100), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 43/159 (27%), Positives = 68/159 (42%), Gaps = 11/159 (6%)

Query: 318 KGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCE 377
           KGD  KA L  + +V  + +  E     Y LG+     G++  A   F K +E+ PD   
Sbjct: 371 KGDVAKA-LQELQAV--VTRAPENPVSRYNLGRAHAARGEWEQARQQFAKAIELRPDYVL 427

Query: 378 TLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTART 437
              AL  + V  G+ E A +   +  K D  +  A       LI S        F  +R 
Sbjct: 428 ARLALAQLQVTRGEFEAALKTAEEILKFDKGNVNA------RLIESAALMGQKKFGDSRV 481

Query: 438 LLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDA 474
           +L    +  P   +VL  +GV++  + +F+ A  SF+ A
Sbjct: 482 MLDAMLKTNPGSPDVLFQLGVVNLAENKFKEAEDSFRRA 520



 Score = 42.4 bits (98), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 65/260 (25%), Positives = 107/260 (41%), Gaps = 53/260 (20%)

Query: 107 EEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVP--- 163
           E  F  A   + +A +++       +G  +  +A+ + E+A      +L+A+ D  P   
Sbjct: 507 ENKFKEAEDSFRRAYQLNPANSRGLMGIVETNMAQNKTEEAVK----LLQAESDKSPNRT 562

Query: 164 ---ALLGQACVEFNRGRYSDSLEFYKRALQV--HPSCPGAIRLGIGLCRYKLGQLGKARQ 218
                LG   V    G+Y  +++ + R L+        G I L +G    + G L  A Q
Sbjct: 563 DLLTALGNTAVRA--GKYDFAIQTFNRVLEQTDKGKAQGDIYLRLGETYRRKGDLNGAIQ 620

Query: 219 AFQRALQLDPENVEALVALA-VMDLQANEAAGIRKGMEKMQRA-FEIYPYCAMALNYLA- 275
           A Q+A +  P+N+  L  LA V+D     AA  R   +++  A  ++ P  A+ALN LA 
Sbjct: 621 ALQKARESLPDNIIVLSTLALVLD-----AASRRPEAKQVYEATIKLDPNNAVALNNLAF 675

Query: 276 ------------------------NHFFFT---GQHFLVEQLTETALAV----TNHGPTK 304
                                   N F  +   G  +L + L   A+ +     N  P  
Sbjct: 676 MMAESGGDLDEALTKAQRAKQLLPNLFEISDTLGWIYLKKNLAANAIDIFKDLVNKQPNH 735

Query: 305 SHSYYNLARSYHSKGDYEKA 324
           S  +Y+LA +Y  +GD  KA
Sbjct: 736 STYHYHLAMAYSQQGDKSKA 755


>gi|300867655|ref|ZP_07112302.1| hypothetical protein OSCI_3440027 [Oscillatoria sp. PCC 6506]
 gi|300334366|emb|CBN57474.1| hypothetical protein OSCI_3440027 [Oscillatoria sp. PCC 6506]
          Length = 1196

 Score = 72.8 bits (177), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 94/367 (25%), Positives = 151/367 (41%), Gaps = 22/367 (5%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
           A   Y+KA  I   +   W  +G  L   G  E+A +++   +E   D+  A   +    
Sbjct: 581 AITSYDKAIEIKHDDHEAWFYRGYALDDLGRFEEAIASYDKAIEIKHDDHEAWFYRGYAL 640

Query: 173 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 232
              GR+ +++  Y + ++  P    A     G     LGQ  +A  ++ + ++  P+  E
Sbjct: 641 GELGRFEEAIASYDKVIEFKPDDYYAWN-NRGWALQNLGQFEEAIASYDKVIEFKPDKHE 699

Query: 233 ALV--ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQL 290
           A     +A+ +L  NE A     +   ++  E  P    A N         GQ    E+ 
Sbjct: 700 AWYNRGVALFNLGRNEEA-----IASYEKVIEFKPDDYYAWNNRGWALQNLGQ---FEEA 751

Query: 291 TETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQ 350
             +   V    P K  ++YN   +  + G  E+A   Y  ++ EI KP +F   ++  G 
Sbjct: 752 IASYDKVIEFKPDKHEAWYNRGVALFNLGRNEEAIASYEKAI-EI-KP-DFYEAWFTRGI 808

Query: 351 VQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDA 410
           V  KLG F  AL +++K +EI PD+ E     G    +L + ++A     KA +I     
Sbjct: 809 VLFKLGRFEEALASYDKAIEIKPDDHEAWNNRGWALGELRRFKEALTSCDKAIEIKADYH 868

Query: 411 QAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESAH 468
            A+ + G  L +      L  F+ A     KA E  P   E  NN GV     G FE A 
Sbjct: 869 YAWNNRGWALRN------LGRFEEAIASYNKALEIKPDHYEAWNNRGVALQNLGRFEEAL 922

Query: 469 QSFKDAL 475
            S   A+
Sbjct: 923 ASLDKAI 929



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 91/369 (24%), Positives = 148/369 (40%), Gaps = 31/369 (8%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
           A   Y+K       +   W  +G  L   G+ E+A +++  V+E   D   A   +    
Sbjct: 649 AIASYDKVIEFKPDDYYAWNNRGWALQNLGQFEEAIASYDKVIEFKPDKHEAWYNRGVAL 708

Query: 173 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 232
           FN GR  +++  Y++ ++  P    A     G     LGQ  +A  ++ + ++  P+  E
Sbjct: 709 FNLGRNEEAIASYEKVIEFKPDDYYAWN-NRGWALQNLGQFEEAIASYDKVIEFKPDKHE 767

Query: 233 ALV--ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQL 290
           A     +A+ +L  NE A     +   ++A EI P    A       +F  G        
Sbjct: 768 AWYNRGVALFNLGRNEEA-----IASYEKAIEIKPDFYEA-------WFTRGIVLFKLGR 815

Query: 291 TETALAVTNHG----PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYY 346
            E ALA  +      P    ++ N   +      +++A     +  K I    ++ + + 
Sbjct: 816 FEEALASYDKAIEIKPDDHEAWNNRGWALGELRRFKEA---LTSCDKAIEIKADYHYAWN 872

Query: 347 GLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKID 406
             G     LG F  A+ ++ K LEI PD+ E     G     LG+ E+A   L KA +I 
Sbjct: 873 NRGWALRNLGRFEEAIASYNKALEIKPDHYEAWNNRGVALQNLGRFEEALASLDKAIEIK 932

Query: 407 PRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP---IEVLNNIGVIHFEKGE 463
           P D   + + G  LI       L+ ++ A   L KA E  P       N I V+H  K  
Sbjct: 933 PDDHYTWCNRGATLIK------LNCYEEALISLDKAIEIDPNYTSAWYNQILVLHKLKRY 986

Query: 464 FESAHQSFK 472
            ESA   +K
Sbjct: 987 EESAKSFYK 995



 Score = 69.7 bits (169), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 89/372 (23%), Positives = 148/372 (39%), Gaps = 40/372 (10%)

Query: 117 YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 176
           Y+K   I       W  +G  L   G  E+A +++   +E   D+  A   +     + G
Sbjct: 551 YDKTIEIKPDHQEAWFNRGWALRKLGRFEKAITSYDKAIEIKHDDHEAWFYRGYALDDLG 610

Query: 177 RYSDSLEFYKRALQV-HPSCPGAIRLGIGLCRYKLGQLGKARQA---FQRALQLDPENVE 232
           R+ +++  Y +A+++ H         G     Y LG+LG+  +A   + + ++  P++  
Sbjct: 611 RFEEAIASYDKAIEIKHDDHEAWFYRG-----YALGELGRFEEAIASYDKVIEFKPDDYY 665

Query: 233 AL--VALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQL 290
           A      A+ +L   E A     +    +  E  P    A        F  G++   E+ 
Sbjct: 666 AWNNRGWALQNLGQFEEA-----IASYDKVIEFKPDKHEAWYNRGVALFNLGRN---EEA 717

Query: 291 TETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQ 350
             +   V    P   +++ N   +  + G +E+A   Y   ++     HE    +Y  G 
Sbjct: 718 IASYEKVIEFKPDDYYAWNNRGWALQNLGQFEEAIASYDKVIEFKPDKHE---AWYNRGV 774

Query: 351 VQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDA 410
               LG    A+ ++EK +EI PD  E     G +  +LG+ E+A     KA +I P D 
Sbjct: 775 ALFNLGRNEEAIASYEKAIEIKPDFYEAWFTRGIVLFKLGRFEEALASYDKAIEIKPDDH 834

Query: 411 QAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEV-------LNNIGVIHFEKGE 463
           +A+ + G  L        L  FK A T   KA     IE+        NN G      G 
Sbjct: 835 EAWNNRGWAL------GELRRFKEALTSCDKA-----IEIKADYHYAWNNRGWALRNLGR 883

Query: 464 FESAHQSFKDAL 475
           FE A  S+  AL
Sbjct: 884 FEEAIASYNKAL 895



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 85/366 (23%), Positives = 143/366 (39%), Gaps = 20/366 (5%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
           A   Y+KA +I       W  +G  L   G+ E+A +++   +E   D+  A   +    
Sbjct: 513 AIASYDKAIKIKPDYHQAWYKRGNALGDLGQFEEALASYDKTIEIKPDHQEAWFNRGWAL 572

Query: 173 FNRGRYSDSLEFYKRALQV-HPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENV 231
              GR+  ++  Y +A+++ H         G  L    LG+  +A  ++ +A+++  ++ 
Sbjct: 573 RKLGRFEKAITSYDKAIEIKHDDHEAWFYRGYALD--DLGRFEEAIASYDKAIEIKHDDH 630

Query: 232 EALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLT 291
           EA            E     + +    +  E  P    A N         GQ    E+  
Sbjct: 631 EAWFYRGYA---LGELGRFEEAIASYDKVIEFKPDDYYAWNNRGWALQNLGQ---FEEAI 684

Query: 292 ETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQV 351
            +   V    P K  ++YN   +  + G  E+A   Y   ++   KP ++ + +   G  
Sbjct: 685 ASYDKVIEFKPDKHEAWYNRGVALFNLGRNEEAIASYEKVIE--FKPDDY-YAWNNRGWA 741

Query: 352 QLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQ 411
              LG F  A+ +++KV+E  PD  E     G     LG+ E+A     KA +I P   +
Sbjct: 742 LQNLGQFEEAIASYDKVIEFKPDKHEAWYNRGVALFNLGRNEEAIASYEKAIEIKPDFYE 801

Query: 412 AFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPI--EVLNNIGVIHFEKGEFESAHQ 469
           A+   G +L        L  F+ A     KA E  P   E  NN G    E   F+ A  
Sbjct: 802 AWFTRGIVLFK------LGRFEEALASYDKAIEIKPDDHEAWNNRGWALGELRRFKEALT 855

Query: 470 SFKDAL 475
           S   A+
Sbjct: 856 SCDKAI 861



 Score = 40.0 bits (92), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 48/108 (44%), Gaps = 10/108 (9%)

Query: 310 NLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVL 369
           NL R+  +   Y+KA          I    ++   +Y  G     LG F  AL +++K +
Sbjct: 506 NLGRNEEAIASYDKA----------IKIKPDYHQAWYKRGNALGDLGQFEEALASYDKTI 555

Query: 370 EIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 417
           EI PD+ E     G    +LG+ EKA     KA +I   D +A+   G
Sbjct: 556 EIKPDHQEAWFNRGWALRKLGRFEKAITSYDKAIEIKHDDHEAWFYRG 603


>gi|427707826|ref|YP_007050203.1| hypothetical protein Nos7107_2446 [Nostoc sp. PCC 7107]
 gi|427360331|gb|AFY43053.1| Tetratricopeptide TPR_1 repeat-containing protein [Nostoc sp. PCC
           7107]
          Length = 708

 Score = 72.8 bits (177), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 79/333 (23%), Positives = 144/333 (43%), Gaps = 19/333 (5%)

Query: 117 YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 176
           YN A ++D      +  +G      G+ + A + +   ++ + + V A   +    ++ G
Sbjct: 374 YNLAIKVDPGNSEAYYNRGNTRAILGDKQGAITDYNQAIKINPNYVFAYNNRGNTRYDLG 433

Query: 177 RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV- 235
            Y  ++  Y +A++++P+   A   G G  RY LG    A   +  AL+ +P N EA   
Sbjct: 434 DYQGAIADYTQAVKINPNHSSAYN-GRGNSRYYLGDKQGALNDYTLALKANPNNAEAYYN 492

Query: 236 -ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETA 294
              A  DL+ + AA     +     A ++ P  + A N   N F++ G+    + L + +
Sbjct: 493 RGNARSDLKDSPAA-----IADYNEAIKLNPNYSAAYNGRGNAFYYLGEK--QKALADYS 545

Query: 295 LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLK 354
            A+ +     S +YYN    Y   G+ + A   Y  ++K IN    + + Y   G  +  
Sbjct: 546 QAIKSDA-NNSEAYYNRGNVYFDLGNKKGAISDYTQAIK-INP--NYAYAYNNRGNTKYD 601

Query: 355 LGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFI 414
           L D + AL ++ + L++ P+         ++Y  LG +E A     +A   +   AQA+ 
Sbjct: 602 LNDLQGALADYNQALKLLPNYAFAYYNRANVYKNLGDLEGAIADYNRAIINNSNYAQAYQ 661

Query: 415 DLGELLISSDTG---AALDAFKTARTLLKKAGE 444
           + G  L   D G   A +   + A  L K+ G 
Sbjct: 662 NRG--LARYDLGEQQAGISDLEIAANLYKEQGN 692



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 108/481 (22%), Positives = 188/481 (39%), Gaps = 69/481 (14%)

Query: 139 LAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGA 198
           L K EV   S       +AD         Q   ++ +G Y  ++E Y +A+ ++P    A
Sbjct: 231 LPKAEVGAVSQPTPTAPKADD-----FYIQGGDKYKKGDYKGAIEAYNQAISINPKYSYA 285

Query: 199 IRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQ 258
                G  RY LG    A + + +A++++PE   A      +    ++    R  +    
Sbjct: 286 YN-DRGNARYYLGDKQGALKDYNQAIKINPEYAFAYYNRGNILYDFDDK---RGALADYN 341

Query: 259 RAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSK 318
           +A ++ P  + A N   N  +  G       L +  LA+    P  S +YYN   +    
Sbjct: 342 QALKLNPNYSSAYNNRGNSHYALGDK--QRALADYNLAIK-VDPGNSEAYYNRGNTRAIL 398

Query: 319 GDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCET 378
           GD + A   Y  ++K IN    ++F Y   G  +  LGD++ A+ ++ + ++I P++   
Sbjct: 399 GDKQGAITDYNQAIK-INP--NYVFAYNNRGNTRYDLGDYQGAIADYTQAVKINPNHSSA 455

Query: 379 LKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTL 438
               G+    LG  + A      A K +P +A+A+ + G                 AR+ 
Sbjct: 456 YNGRGNSRYYLGDKQGALNDYTLALKANPNNAEAYYNRG----------------NARSD 499

Query: 439 LKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASAS 498
           LK    + P  + +    I      + +A+       G G     L  K K  + D S +
Sbjct: 500 LK----DSPAAIADYNEAIKLNP-NYSAAYN------GRGNAFYYLGEKQKA-LADYSQA 547

Query: 499 MLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDY 558
           +            ++D N+ E  +N+  V F+L      I D   A  +     + Y + 
Sbjct: 548 I------------KSDANNSEAYYNRGNVYFDLGNKKGAISDYTQAIKINPNYAYAYNNR 595

Query: 559 VDAYLRLAAIAKARNNLQLSIELVNEALKVNGKY-------PNALSMLGDLELKNDDWVK 611
            +    L       N+LQ ++   N+ALK+   Y        N    LGDLE    D+ +
Sbjct: 596 GNTKYDL-------NDLQGALADYNQALKLLPNYAFAYYNRANVYKNLGDLEGAIADYNR 648

Query: 612 A 612
           A
Sbjct: 649 A 649



 Score = 49.7 bits (117), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 68/325 (20%), Positives = 135/325 (41%), Gaps = 18/325 (5%)

Query: 99  IETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEAD 158
           I+   + K+  +  A + YN+A  I+      +  +G      G+ + A   +   ++ +
Sbjct: 254 IQGGDKYKKGDYKGAIEAYNQAISINPKYSYAYNDRGNARYYLGDKQGALKDYNQAIKIN 313

Query: 159 RDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQ 218
            +   A   +  + ++      +L  Y +AL+++P+   A     G   Y LG   +A  
Sbjct: 314 PEYAFAYYNRGNILYDFDDKRGALADYNQALKLNPNYSSAYN-NRGNSHYALGDKQRALA 372

Query: 219 AFQRALQLDPENVEALVALAVMDLQANEAA--GIRKG-MEKMQRAFEIYPYCAMALNYLA 275
            +  A+++DP N EA         + N  A  G ++G +    +A +I P    A N   
Sbjct: 373 DYNLAIKVDPGNSEAYYN------RGNTRAILGDKQGAITDYNQAIKINPNYVFAYNNRG 426

Query: 276 NHFFFTGQH-FLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKE 334
           N  +  G +   +   T+      NH    S +Y     S +  GD + A   Y  ++K 
Sbjct: 427 NTRYDLGDYQGAIADYTQAVKINPNH----SSAYNGRGNSRYYLGDKQGALNDYTLALKA 482

Query: 335 INKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK 394
                E    YY  G  +  L D  +A+ ++ + +++ P+        G+ +  LG+ +K
Sbjct: 483 NPNNAE---AYYNRGNARSDLKDSPAAIADYNEAIKLNPNYSAAYNGRGNAFYYLGEKQK 539

Query: 395 AQELLRKAAKIDPRDAQAFIDLGEL 419
           A     +A K D  +++A+ + G +
Sbjct: 540 ALADYSQAIKSDANNSEAYYNRGNV 564


>gi|392411117|ref|YP_006447724.1| tetratricopeptide repeat protein [Desulfomonile tiedjei DSM 6799]
 gi|390624253|gb|AFM25460.1| tetratricopeptide repeat protein [Desulfomonile tiedjei DSM 6799]
          Length = 487

 Score = 72.8 bits (177), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 82/339 (24%), Positives = 139/339 (41%), Gaps = 32/339 (9%)

Query: 142 GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 201
           G++ +A   +   +E D     AL  +    +  G Y  +++ Y RA++++P        
Sbjct: 74  GKLNEAVQDYSKAIEIDPRMETALNNRGSAYYRLGEYDRAIKDYGRAIELNP-------- 125

Query: 202 GIGLCRYKL-------GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGM 254
           G GL  Y         GQ  K+ + F RA+Q+DP + +         LQ NE   I K +
Sbjct: 126 GYGLAYYNRGNAYHGKGQFEKSIEDFSRAIQIDPRDKDVYNNRGWAYLQVNE---IDKSI 182

Query: 255 EKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARS 314
           E   RA ++ P   +A     N    +G    VE   +         P  + +Y     +
Sbjct: 183 EDFDRAIQLDPNYVLAYANRGNARLKSGN---VEGAIQDLSRAIELNPEFATAYLQRGNA 239

Query: 315 YHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPD 374
           Y  KG  ++A   Y  +V+          PY   G V  K G+   AL +  K + + P+
Sbjct: 240 YVRKGLLDEALNDYNKAVR---ISPILADPYNNRGWVFFKKGNIAQALRDVSKAVSLNPE 296

Query: 375 NCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKT 434
             +     G I+  +G+  KA     +A ++DP  A  ++   E L+S      +     
Sbjct: 297 LSKAYTNRGWIHKSIGECPKALPDFDRALELDPSAAAIYVFRAECLLS------MHQTDR 350

Query: 435 ARTLLKKAGEEVPI--EVLNNIGVIHFEKGEFESAHQSF 471
           AR+ L KA    P   E+L  +G +    G++ +A + F
Sbjct: 351 ARSDLDKAYALDPTNPEILETLGSLKEIAGDYSAALEMF 389



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 92/381 (24%), Positives = 148/381 (38%), Gaps = 56/381 (14%)

Query: 90  GVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASS 149
           GV +  LGK+             A Q Y+KA  ID    +    +G      GE ++A  
Sbjct: 67  GVSHERLGKLNE-----------AVQDYSKAIEIDPRMETALNNRGSAYYRLGEYDRAIK 115

Query: 150 AFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYK 209
            +   +E +     A   +      +G++  S+E + RA+Q+ P          G    +
Sbjct: 116 DYGRAIELNPGYGLAYYNRGNAYHGKGQFEKSIEDFSRAIQIDPRDKDVYN-NRGWAYLQ 174

Query: 210 LGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAM 269
           + ++ K+ + F RA+QLDP  V A        L++    G    ++ + RA E+ P  A 
Sbjct: 175 VNEIDKSIEDFDRAIQLDPNYVLAYANRGNARLKSGNVEG---AIQDLSRAIELNPEFAT 231

Query: 270 ALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYM 329
           A  YL     +  +  L E L +   AV    P  +  Y N    +  KG+  +A L  +
Sbjct: 232 A--YLQRGNAYVRKGLLDEALNDYNKAVR-ISPILADPYNNRGWVFFKKGNIAQA-LRDV 287

Query: 330 ASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLE-------IY---------- 372
           +    +N   E    Y   G +   +G+   AL +F++ LE       IY          
Sbjct: 288 SKAVSLNP--ELSKAYTNRGWIHKSIGECPKALPDFDRALELDPSAAAIYVFRAECLLSM 345

Query: 373 -----------------PDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFID 415
                            P N E L+ LG +    G    A E+  K   + P D+ A +D
Sbjct: 346 HQTDRARSDLDKAYALDPTNPEILETLGSLKEIAGDYSAALEMFTKLVDLRPNDSAAHVD 405

Query: 416 LGELLISSDTGA-ALDAFKTA 435
           LG  L  S + A A++ F  A
Sbjct: 406 LGMALGKSGSLARAVEEFTRA 426



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 64/268 (23%), Positives = 103/268 (38%), Gaps = 60/268 (22%)

Query: 250 IRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG------PT 303
           + + ++   +A EI P    ALN   + ++         +L E   A+ ++G      P 
Sbjct: 76  LNEAVQDYSKAIEIDPRMETALNNRGSAYY---------RLGEYDRAIKDYGRAIELNPG 126

Query: 304 KSHSYYNLARSYHSKGDYEKA---------------------GLYYMASVKEINKPHE-- 340
              +YYN   +YH KG +EK+                     G  Y+  V EI+K  E  
Sbjct: 127 YGLAYYNRGNAYHGKGQFEKSIEDFSRAIQIDPRDKDVYNNRGWAYL-QVNEIDKSIEDF 185

Query: 341 ---------FIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQ 391
                    ++  Y   G  +LK G+   A+ +  + +E+ P+        G+ YV+ G 
Sbjct: 186 DRAIQLDPNYVLAYANRGNARLKSGNVEGAIQDLSRAIELNPEFATAYLQRGNAYVRKGL 245

Query: 392 IEKAQELLRKAAKIDPRDAQAFIDLGELLI-SSDTGAALDAFKTARTL---LKKAGEEVP 447
           +++A     KA +I P  A  + + G +     +   AL     A +L   L KA     
Sbjct: 246 LDEALNDYNKAVRISPILADPYNNRGWVFFKKGNIAQALRDVSKAVSLNPELSKA----- 300

Query: 448 IEVLNNIGVIHFEKGEFESAHQSFKDAL 475
                N G IH   GE   A   F  AL
Sbjct: 301 ---YTNRGWIHKSIGECPKALPDFDRAL 325



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 37/137 (27%), Positives = 67/137 (48%), Gaps = 5/137 (3%)

Query: 117 YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 176
           +++A  +D    + +V + + LL+  + ++A S        D  N   L     ++   G
Sbjct: 321 FDRALELDPSAAAIYVFRAECLLSMHQTDRARSDLDKAYALDPTNPEILETLGSLKEIAG 380

Query: 177 RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVA 236
            YS +LE + + + + P+   A  + +G+   K G L +A + F RA+QLDP+N EA + 
Sbjct: 381 DYSAALEMFTKLVDLRPNDSAA-HVDLGMALGKSGSLARAVEEFTRAIQLDPQNREAYLR 439

Query: 237 LAVMDLQANEAAGIRKG 253
             V    A +  G +KG
Sbjct: 440 RGV----ARDLLGDKKG 452


>gi|384109807|ref|ZP_10010669.1| Tetratricopeptide repeat-containing protein [Treponema sp. JC4]
 gi|383868639|gb|EID84276.1| Tetratricopeptide repeat-containing protein [Treponema sp. JC4]
          Length = 381

 Score = 72.8 bits (177), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 82/333 (24%), Positives = 139/333 (41%), Gaps = 61/333 (18%)

Query: 137 LLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCP 196
           LLL +    +A  AF+ +L+   +N  AL+G    E  +G + +++ +Y R L+ +P+  
Sbjct: 37  LLLKENNFFEAKIAFEEILKIQDNNSYALVGLGDTERKQGHFHEAMVYYNRCLESYPANS 96

Query: 197 GAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEK 256
            A+  G+  C   + Q  +A + +Q+ L  D +N+  +  +A            RK +  
Sbjct: 97  YAL-FGLADCYKAMNQYSRAIEIWQQYLVQDDKNITVITRVA---------DAYRK-IHD 145

Query: 257 MQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYH 316
            +++ E+Y                     +++  T+ A A+   G    H  Y+      
Sbjct: 146 FRKSKELYLK-------------------VLDMETDNAYALIGLG----HLNYDFKEY-- 180

Query: 317 SKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNC 376
                 K  LYY   V EINK H  I     +G    KL  F   +  FE  L+  P+N 
Sbjct: 181 ------KDALYYWTRVYEINKEHSDIRVLTAIGNCHRKLKTFDEGVRFFEMTLDREPNNF 234

Query: 377 ETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKT-- 434
             L  L   Y  + Q  K+ E  +K  +IDP++          +I + TG   DA++T  
Sbjct: 235 YALFGLADCYRGMNQQFKSIEYWKKILEIDPKNK---------VILTRTG---DAYRTTG 282

Query: 435 ----ARTLLKKAGEEVPIEVLNNIGVIHFEKGE 463
               A+    KA  E+  ++   IG+    KGE
Sbjct: 283 NYEEAKNFYNKA-LEIDFDIYAAIGLALICKGE 314


>gi|333982415|ref|YP_004511625.1| hypothetical protein [Methylomonas methanica MC09]
 gi|333806456|gb|AEF99125.1| Tetratricopeptide TPR_2 repeat-containing protein [Methylomonas
           methanica MC09]
          Length = 789

 Score = 72.8 bits (177), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 94/429 (21%), Positives = 180/429 (41%), Gaps = 49/429 (11%)

Query: 43  WLIIAREYFKQGKVEQFRQILEEG-------------------SSPEIDEYYADVRYERI 83
           W ++A+  ++  + ++ +Q+L++                    +  +  E YA VR + I
Sbjct: 292 WFVLAKVLYRLDRRDEAKQLLQKAELINPNHGSVYATKAEWLLTDGKPKEAYATVR-DAI 350

Query: 84  AILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE 143
            +   +G ++  LG I  +    +E    + + Y  A R++  + S       +L   G+
Sbjct: 351 RVEPGVGDHWRLLGIIADRLNRADE----SAKAYKAALRLNPMDASAKQALSNVLARNGK 406

Query: 144 VEQASSAFKIVLEADRDNVPALLGQ----ACVEFNRGRYSDSLEFYKRALQVHPSCPGAI 199
            + A    ++ L  + DN P+  G        E  R  Y+D+ + +++A+++ P    A 
Sbjct: 407 ADAA----RLTLGNEIDNNPSSAGTWISIGFTESGRKHYADAEKAFRKAIEIAPETSNAW 462

Query: 200 RLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAG-IRKGMEKMQ 258
            +G+G    +  +L +A QA+ +A    P N   +  +           G  R  +  ++
Sbjct: 463 -IGLGAVLTETNRLKEAEQAYDKAYDSKPNNPGVIAEILTNRGNVKSKLGDKRAALADIE 521

Query: 259 RAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSK 318
            A +I P    A   L         H  V       +     GP     +  LA S  + 
Sbjct: 522 AAVKIDPTYINAYRSLGILKVEVRDHRAVVDAFGKVITSDLAGP---DDWATLAESLEAI 578

Query: 319 GDYEKAGLYYMASVKEI--NKPHEF--IFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPD 374
           GD  KA L  +   +++  N P     +  YYG      + GD + AL   E+ L+I   
Sbjct: 579 GD-NKAALEALEKSEKLDPNNPKTLQALTGYYG------RNGDLQKALVYIERALKIDSS 631

Query: 375 NCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGEL-LISSDTGAALDAFK 433
           +     + G+  ++LG++ +A   L  A  +DP+ A A+I+LGE  + S++ G A+ + +
Sbjct: 632 SAVNWSSKGYALLKLGRLPEAISTLETATNLDPQFANAWINLGEAQMRSNNLGKAITSLE 691

Query: 434 TARTLLKKA 442
            A +L   A
Sbjct: 692 RAVSLAPTA 700



 Score = 45.8 bits (107), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 72/342 (21%), Positives = 141/342 (41%), Gaps = 37/342 (10%)

Query: 108 EHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLG 167
           +H+  A + + KA  I     + W+G G +L     +++A  A+    ++  +N P ++ 
Sbjct: 439 KHYADAEKAFRKAIEIAPETSNAWIGLGAVLTETNRLKEAEQAYDKAYDSKPNN-PGVIA 497

Query: 168 QACVEFNRGRYSDSLEFYKRAL-------QVHPSCPGAIRLGIGLCRYKLGQLGKARQAF 220
           +  +  NRG     L   + AL       ++ P+   A R  +G+ + ++        AF
Sbjct: 498 E--ILTNRGNVKSKLGDKRAALADIEAAVKIDPTYINAYR-SLGILKVEVRDHRAVVDAF 554

Query: 221 QRALQLDPENVEALVALAVMDLQANEAAGIRKG-MEKMQRAFEIYPYCAMALNYLANHFF 279
            + +  D    +    LA    ++ EA G  K  +E ++++ ++ P     L  L  ++ 
Sbjct: 555 GKVITSDLAGPDDWATLA----ESLEAIGDNKAALEALEKSEKLDPNNPKTLQALTGYYG 610

Query: 280 FTG--QHFLVEQLTETALAVTNHG----PTKSHSYYNLARSYHSKGDYEKAGLYYMASVK 333
             G  Q  LV    E AL + +       +K ++   L R   +    E A         
Sbjct: 611 RNGDLQKALV--YIERALKIDSSSAVNWSSKGYALLKLGRLPEAISTLETA--------- 659

Query: 334 EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIE 393
             N   +F   +  LG+ Q++  +   A+T+ E+ + + P   +    L   Y+   Q E
Sbjct: 660 -TNLDPQFANAWINLGEAQMRSNNLGKAITSLERAVSLAPTAPDARLYLAQSYLNSRQAE 718

Query: 394 KAQELLRKAAKIDPRDAQAF--IDLGELLISSDTGAALDAFK 433
           KA+       K  P   QA   + L +L+  +++ AAL  ++
Sbjct: 719 KARTHANALLKAQPELPQALAIVTLADLM-DNNSAAALTNYR 759



 Score = 42.4 bits (98), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 51/176 (28%), Positives = 71/176 (40%), Gaps = 18/176 (10%)

Query: 86  LNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVE 145
           L AL  YY   G ++            A  Y  +A +ID      W  KG  LL  G + 
Sbjct: 602 LQALTGYYGRNGDLQK-----------ALVYIERALKIDSSSAVNWSSKGYALLKLGRLP 650

Query: 146 QASSAFKIVLEADRD--NVPALLGQACVEFNR-GRYSDSLEFYKRALQVHPSCPGAIRLG 202
           +A S  +     D    N    LG+A +  N  G+   SLE   RA+ + P+ P A RL 
Sbjct: 651 EAISTLETATNLDPQFANAWINLGEAQMRSNNLGKAITSLE---RAVSLAPTAPDA-RLY 706

Query: 203 IGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQ 258
           +        Q  KAR      L+  PE  +AL  + + DL  N +A       K+Q
Sbjct: 707 LAQSYLNSRQAEKARTHANALLKAQPELPQALAIVTLADLMDNNSAAALTNYRKIQ 762


>gi|406912813|gb|EKD52347.1| hypothetical protein ACD_62C00048G0002 [uncultured bacterium]
          Length = 390

 Score = 72.8 bits (177), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 73/288 (25%), Positives = 128/288 (44%), Gaps = 11/288 (3%)

Query: 131 WVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQ 190
           ++  G  LL +     + +AF+  LE   D+    L         G+Y  ++   K+A Q
Sbjct: 43  YLNLGVSLLDQENYLDSITAFQKALEISSDSAEVHLVMGMAYDGLGQYEKAIFHLKKAGQ 102

Query: 191 VHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAG- 249
           + P    A  + +GL   K+  + +A + +  AL +DP N +A   L V    A +  G 
Sbjct: 103 LSPQLSDA-HVNLGLVYLKMDNVDEAIKTYYDALMIDPVNEKAYFGLGV----AYQRMGR 157

Query: 250 IRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYY 309
             + ++    A  I P  + A N L       G     E +T   +A+         +Y 
Sbjct: 158 YEEAIDAYSEAIMISPAFSDAYNNLGIALSHVG--LYEEAITSYLIAIKIRPDLSEAAYN 215

Query: 310 NLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVL 369
           NL  +Y S G  +KA   Y  ++  +  P E+   Y  LG V+ + G++  A+  +++ L
Sbjct: 216 NLGITYQSVGQDDKAVEAYTNAI--LLDP-EYTKAYCNLGHVRQQKGNYDEAMWAYQEAL 272

Query: 370 EIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 417
           +I P   +    LG+ Y   G+ EKA +    A + +P+DA+ + +LG
Sbjct: 273 KIDPAFADAHYGLGNAYGSTGEYEKAADSYLLAIRHNPKDARTYFNLG 320



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 61/248 (24%), Positives = 106/248 (42%), Gaps = 45/248 (18%)

Query: 173 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 232
            ++  Y DS+  +++AL++  S    + L +G+    LGQ  KA    ++A QL P+  +
Sbjct: 51  LDQENYLDSITAFQKALEI-SSDSAEVHLVMGMAYDGLGQYEKAIFHLKKAGQLSPQLSD 109

Query: 233 ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTE 292
           A V L ++ L+          M+ +  A + Y Y A+ ++                    
Sbjct: 110 AHVNLGLVYLK----------MDNVDEAIKTY-YDALMID-------------------- 138

Query: 293 TALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQ 352
                    P    +Y+ L  +Y   G YE+A   Y  ++  +  P  F   Y  LG   
Sbjct: 139 ---------PVNEKAYFGLGVAYQRMGRYEEAIDAYSEAI--MISP-AFSDAYNNLGIAL 186

Query: 353 LKLGDFRSALTNFEKVLEIYPDNCET-LKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQ 411
             +G +  A+T++   ++I PD  E     LG  Y  +GQ +KA E    A  +DP   +
Sbjct: 187 SHVGLYEEAITSYLIAIKIRPDLSEAAYNNLGITYQSVGQDDKAVEAYTNAILLDPEYTK 246

Query: 412 AFIDLGEL 419
           A+ +LG +
Sbjct: 247 AYCNLGHV 254



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 83/366 (22%), Positives = 152/366 (41%), Gaps = 27/366 (7%)

Query: 331 SVKEINKPHEFIFPYY-GLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQL 389
             +E  +P +  F +Y  LG   L   ++  ++T F+K LEI  D+ E    +G  Y  L
Sbjct: 28  GAEETQEPIDRDFTHYLNLGVSLLDQENYLDSITAFQKALEISSDSAEVHLVMGMAYDGL 87

Query: 390 GQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIE 449
           GQ EKA   L+KA ++ P+ + A ++LG + +  D     +A KT    L    + V  +
Sbjct: 88  GQYEKAIFHLKKAGQLSPQLSDAHVNLGLVYLKMDN--VDEAIKTYYDALMI--DPVNEK 143

Query: 450 VLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFH 509
               +GV +   G +E A  ++ +A+   I     D+     +  +   + +        
Sbjct: 144 AYFGLGVAYQRMGRYEEAIDAYSEAI--MISPAFSDAYNNLGIALSHVGLYEEAITSYLI 201

Query: 510 RFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIA 569
             +   +  E  +N + + +          D  A       IL    +Y  AY  L  + 
Sbjct: 202 AIKIRPDLSEAAYNNLGITYQSVG-----QDDKAVEAYTNAILLD-PEYTKAYCNLGHVR 255

Query: 570 KARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSY 629
           + + N   ++    EALK++  + +A   LG+      ++ KA +++  A    + KD+ 
Sbjct: 256 QQKGNYDEAMWAYQEALKIDPAFADAHYGLGNAYGSTGEYEKAADSYLLAI-RHNPKDAR 314

Query: 630 ATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKG 689
              +LG W+Y           KL    L+K  + Y + I        A  G G+V  + G
Sbjct: 315 TYFNLG-WSY----------GKL--GQLDKELDAYNQAISLKQDYAKAYLGRGLVYLKNG 361

Query: 690 QFDVSK 695
             D+++
Sbjct: 362 HKDMAR 367



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 66/299 (22%), Positives = 120/299 (40%), Gaps = 11/299 (3%)

Query: 119 KASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRY 178
           KA ++        V  G + L    V++A   +   L  D  N  A  G        GRY
Sbjct: 99  KAGQLSPQLSDAHVNLGLVYLKMDNVDEAIKTYYDALMIDPVNEKAYFGLGVAYQRMGRY 158

Query: 179 SDSLEFYKRALQVHPSCPGAIR-LGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVAL 237
            ++++ Y  A+ + P+   A   LGI L    +G   +A  ++  A+++ P+  EA  A 
Sbjct: 159 EEAIDAYSEAIMISPAFSDAYNNLGIALSH--VGLYEEAITSYLIAIKIRPDLSEA--AY 214

Query: 238 AVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAV 297
             + +         K +E    A  + P    A   L +     G +       + AL +
Sbjct: 215 NNLGITYQSVGQDDKAVEAYTNAILLDPEYTKAYCNLGHVRQQKGNYDEAMWAYQEALKI 274

Query: 298 TNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGD 357
               P  + ++Y L  +Y S G+YEKA   Y+ +++   K       Y+ LG    KLG 
Sbjct: 275 D---PAFADAHYGLGNAYGSTGEYEKAADSYLLAIRHNPKDAR---TYFNLGWSYGKLGQ 328

Query: 358 FRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDL 416
               L  + + + +  D  +     G +Y++ G  + A++       +D + A +  +L
Sbjct: 329 LDKELDAYNQAISLKQDYAKAYLGRGLVYLKNGHKDMARQEYDVLKNLDAKMASSLYEL 387


>gi|326435520|gb|EGD81090.1| tetratricopeptide protein [Salpingoeca sp. ATCC 50818]
          Length = 819

 Score = 72.8 bits (177), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 73/258 (28%), Positives = 115/258 (44%), Gaps = 31/258 (12%)

Query: 256 KMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVT-----NHGPTKSHSYYN 310
           K++   E +P  A   N L N +   G +    +L E ALA+         P+ + +Y N
Sbjct: 342 KVETLGEKHPSTAETYNNLGNAYARKGDYDKAIELYEKALAIKVETLGEKHPSTAETYNN 401

Query: 311 LARSYHSKGDYEKAGLYY----MASVKEINKPHEFIFPYYG-LGQVQLKLGDFRSALTNF 365
           L  +Y SKGDY++A  +Y      +V+ + + H      Y  LG      G +  A+  +
Sbjct: 402 LGSAYASKGDYDRAIAFYEKDLAITVETLGEKHPSTADTYNNLGNAYYSKGAYDRAIHFY 461

Query: 366 EKVLEI--------YPDNCETLKALGHIYVQLGQIEKAQELLRKA--------AKIDPRD 409
           EK L I        +P   +T   LG  Y   G+ ++A     +A         K  P  
Sbjct: 462 EKALAITAEALGEKHPSTAQTYNNLGIAYKNKGEYDRAIAFYEQALAITVEVLGKKHPST 521

Query: 410 AQAFIDLGELLIS-SDTGAALDAFKTARTLLKKA-GEEVPIE--VLNNIGVIHFEKGEFE 465
           AQ + +LG    +  D G A++ ++ AR +  +A GE+ P     L NIG++H ++GE E
Sbjct: 522 AQTYNNLGNAYKNKGDYGKAIECYEKARAVYVEALGEKHPYTAMTLANIGLLHDKRGEKE 581

Query: 466 SAHQSFKDALGDGIWLTL 483
            A    + AL D    TL
Sbjct: 582 QACAYTQQAL-DAFTTTL 598



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 63/226 (27%), Positives = 95/226 (42%), Gaps = 34/226 (15%)

Query: 282 GQHFLVEQLTETALAV-----TNHGPTKSHSYYNLARSYHSKGDYEKAGLYY----MASV 332
           G+H       ETALA+        G   +  Y NL  +Y SKG Y++A  YY       V
Sbjct: 284 GEHDRAIAYFETALAIRLRTEGEKGGNVAVLYNNLGNAYFSKGAYDRAIHYYDKALAIKV 343

Query: 333 KEINKPHEFIF-PYYGLGQVQLKLGDFRSALTNFEKVLEI--------YPDNCETLKALG 383
           + + + H      Y  LG    + GD+  A+  +EK L I        +P   ET   LG
Sbjct: 344 ETLGEKHPSTAETYNNLGNAYARKGDYDKAIELYEKALAIKVETLGEKHPSTAETYNNLG 403

Query: 384 HIYVQLGQIEKAQELLRKAAKID--------PRDAQAFIDLGELLISSDTGA---ALDAF 432
             Y   G  ++A     K   I         P  A  + +LG    S   GA   A+  +
Sbjct: 404 SAYASKGDYDRAIAFYEKDLAITVETLGEKHPSTADTYNNLGNAYYSK--GAYDRAIHFY 461

Query: 433 KTARTLLKKA-GEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDAL 475
           + A  +  +A GE+ P   +  NN+G+ +  KGE++ A   ++ AL
Sbjct: 462 EKALAITAEALGEKHPSTAQTYNNLGIAYKNKGEYDRAIAFYEQAL 507



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 77/310 (24%), Positives = 127/310 (40%), Gaps = 52/310 (16%)

Query: 135 GQLLLAKGEVEQASSAFKIVL------EADRD-NVPAL---LGQACVEFNRGRYSDSLEF 184
           G +L   GE ++A + F+  L      E ++  NV  L   LG A   F++G Y  ++ +
Sbjct: 277 GAVLSDFGEHDRAIAYFETALAIRLRTEGEKGGNVAVLYNNLGNA--YFSKGAYDRAIHY 334

Query: 185 YKRALQV--------HPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVA 236
           Y +AL +        HPS        +G    + G   KA + +++AL +  E +     
Sbjct: 335 YDKALAIKVETLGEKHPSTAETYN-NLGNAYARKGDYDKAIELYEKALAIKVETLGEKHP 393

Query: 237 LAVMDLQANEAAGIRKGMEKMQRAF-------------EIYPYCAMALNYLANHFFFTGQ 283
                     +A   KG      AF             E +P  A   N L N ++  G 
Sbjct: 394 STAETYNNLGSAYASKGDYDRAIAFYEKDLAITVETLGEKHPSTADTYNNLGNAYYSKGA 453

Query: 284 -----HFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYY----MASVKE 334
                HF  + L  TA A+    P+ + +Y NL  +Y +KG+Y++A  +Y      +V+ 
Sbjct: 454 YDRAIHFYEKALAITAEALGEKHPSTAQTYNNLGIAYKNKGEYDRAIAFYEQALAITVEV 513

Query: 335 INKPHEFIF-PYYGLGQVQLKLGDFRSALTNFEKVLEIY--------PDNCETLKALGHI 385
           + K H      Y  LG      GD+  A+  +EK   +Y        P    TL  +G +
Sbjct: 514 LGKKHPSTAQTYNNLGNAYKNKGDYGKAIECYEKARAVYVEALGEKHPYTAMTLANIGLL 573

Query: 386 YVQLGQIEKA 395
           + + G+ E+A
Sbjct: 574 HDKRGEKEQA 583


>gi|110596792|ref|ZP_01385082.1| TPR repeat:Tetratricopeptide TPR_3:Tetratricopeptide TPR_4
           [Chlorobium ferrooxidans DSM 13031]
 gi|110341479|gb|EAT59939.1| TPR repeat:Tetratricopeptide TPR_3:Tetratricopeptide TPR_4
           [Chlorobium ferrooxidans DSM 13031]
          Length = 466

 Score = 72.8 bits (177), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 95/410 (23%), Positives = 159/410 (38%), Gaps = 60/410 (14%)

Query: 123 IDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSL 182
           I  +   TW   G  L   G  E+A  AF+  +     +    L  A   FN G   ++L
Sbjct: 64  ITPYNTETWFHLGNCLTLNGSFEEALEAFQKAVVLSPSDSEMALNLALAWFNTGHLDEAL 123

Query: 183 EFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA---- 238
           E  ++ + +  S         G+   +L +  +A + F+RAL+LD E  +A   LA    
Sbjct: 124 EELEKMI-IDSSIEKEYHYYRGIVLQRLERFVEAEEDFERALELDAEFSDAWYELAYCKD 182

Query: 239 VMDLQANEAAGIRKGME-----------------KMQRAFEIYPYCAMALNYL------- 274
           ++       +  RK ++                 KM+R  E      M+L          
Sbjct: 183 ILGKLEESTSCYRKTLDQDPYNINAWYNNGLVLSKMKRYDEALDSYDMSLAISEDFSSAW 242

Query: 275 ---ANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMAS 331
              AN    TG+   +E+  E+ +      P   ++ YNL  +Y    DY +A   Y   
Sbjct: 243 YNRANVLAITGR---IEEAAESYIKTLEQEPDDINALYNLGIAYEELEDYSEAVHCYRRC 299

Query: 332 VKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQ 391
           + EIN   EF   ++ L      L ++  A++  ++ L   P++ E L     I   L  
Sbjct: 300 I-EINS--EFTDAWFALACCHEALEEYEEAISAIDQALTALPESIEFLLLKAEIEYNLND 356

Query: 392 IEKAQELLRKAAKIDPRDAQAFIDLGELLI-SSDTGAALDAFKTARTLLKKAGEEVPIEV 450
           +E +    R+   IDP   Q ++D   +L  + D  A++DA + +  L   + E      
Sbjct: 357 LENSISTYREIIMIDPESPQIWVDFAMVLREAGDVNASIDALQQSLKLQPFSAE------ 410

Query: 451 LNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASML 500
                        FE A   F  A+GD   L+ L + +K + ID    +L
Sbjct: 411 -----------AHFEIAAAYF--AMGDK--LSTLKALSKAFKIDPDKKLL 445



 Score = 46.6 bits (109), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 44/203 (21%), Positives = 84/203 (41%), Gaps = 36/203 (17%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPAL--LGQAC 170
           A   Y+ +  I     S W  +  +L   G +E+A+ ++   LE + D++ AL  LG A 
Sbjct: 224 ALDSYDMSLAISEDFSSAWYNRANVLAITGRIEEAAESYIKTLEQEPDDINALYNLGIAY 283

Query: 171 VEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPEN 230
            E     YS+++  Y+R ++++     A    +  C   L +  +A  A  +AL   PE+
Sbjct: 284 EELED--YSEAVHCYRRCIEINSEFTDA-WFALACCHEALEEYEEAISAIDQALTALPES 340

Query: 231 VEALVALAVMDLQAN-------------------------------EAAGIRKGMEKMQR 259
           +E L+  A ++   N                               EA  +   ++ +Q+
Sbjct: 341 IEFLLLKAEIEYNLNDLENSISTYREIIMIDPESPQIWVDFAMVLREAGDVNASIDALQQ 400

Query: 260 AFEIYPYCAMALNYLANHFFFTG 282
           + ++ P+ A A   +A  +F  G
Sbjct: 401 SLKLQPFSAEAHFEIAAAYFAMG 423



 Score = 45.4 bits (106), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 39/161 (24%), Positives = 68/161 (42%), Gaps = 4/161 (2%)

Query: 105 EKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPA 164
           E+ E +  A   Y +   I+      W        A  E E+A SA    L A  +++  
Sbjct: 284 EELEDYSEAVHCYRRCIEINSEFTDAWFALACCHEALEEYEEAISAIDQALTALPESIEF 343

Query: 165 LLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRAL 224
           LL +A +E+N     +S+  Y+  + + P  P  I +   +   + G +  +  A Q++L
Sbjct: 344 LLLKAEIEYNLNDLENSISTYREIIMIDPESP-QIWVDFAMVLREAGDVNASIDALQQSL 402

Query: 225 QLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYP 265
           +L P + EA   +A       +     K + K   AF+I P
Sbjct: 403 KLQPFSAEAHFEIAAAYFAMGDKLSTLKALSK---AFKIDP 440



 Score = 41.6 bits (96), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 79/378 (20%), Positives = 139/378 (36%), Gaps = 59/378 (15%)

Query: 243 QANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGP 302
           Q NE   + + +   +R  EI PY      +L N     G     E+  E         P
Sbjct: 44  QYNEDGFVIEALAVARRLEEITPYNTETWFHLGNCLTLNGS---FEEALEAFQKAVVLSP 100

Query: 303 TKSHSYYNLARSYHSKGDYEKA--GLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRS 360
           + S    NLA ++ + G  ++A   L  M     I K +     +Y  G V  +L  F  
Sbjct: 101 SDSEMALNLALAWFNTGHLDEALEELEKMIIDSSIEKEY-----HYYRGIVLQRLERFVE 155

Query: 361 ALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 420
           A  +FE+ LE+  +  +    L +    LG++E++    RK    DP +  A+ + G +L
Sbjct: 156 AEEDFERALELDAEFSDAWYELAYCKDILGKLEESTSCYRKTLDQDPYNINAWYNNGLVL 215

Query: 421 ISSDT-GAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGI 479
                   ALD++  +  +     E+      N   V+    G  E A +S+        
Sbjct: 216 SKMKRYDEALDSYDMSLAI----SEDFSSAWYNRANVLAI-TGRIEEAAESY-------- 262

Query: 480 WLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIH 539
                    KT                           +E   + +  L+NL    E++ 
Sbjct: 263 --------IKT---------------------------LEQEPDDINALYNLGIAYEELE 287

Query: 540 DTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSML 599
           D   A   YR  +    ++ DA+  LA   +A    + +I  +++AL    +    L + 
Sbjct: 288 DYSEAVHCYRRCIEINSEFTDAWFALACCHEALEEYEEAISAIDQALTALPESIEFLLLK 347

Query: 600 GDLELKNDDWVKAKETFR 617
            ++E   +D   +  T+R
Sbjct: 348 AEIEYNLNDLENSISTYR 365



 Score = 40.0 bits (92), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 39/170 (22%), Positives = 69/170 (40%), Gaps = 19/170 (11%)

Query: 70  EIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPS 129
           E+D  ++D  YE       L      LGK+E            +T  Y K    D +  +
Sbjct: 165 ELDAEFSDAWYE-------LAYCKDILGKLEE-----------STSCYRKTLDQDPYNIN 206

Query: 130 TWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRAL 189
            W   G +L      ++A  ++ + L    D   A   +A V    GR  ++ E Y + L
Sbjct: 207 AWYNNGLVLSKMKRYDEALDSYDMSLAISEDFSSAWYNRANVLAITGRIEEAAESYIKTL 266

Query: 190 QVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAV 239
           +  P    A+   +G+   +L    +A   ++R ++++ E  +A  ALA 
Sbjct: 267 EQEPDDINAL-YNLGIAYEELEDYSEAVHCYRRCIEINSEFTDAWFALAC 315


>gi|124021994|ref|YP_001016301.1| hypothetical protein P9303_02811 [Prochlorococcus marinus str. MIT
           9303]
 gi|123962280|gb|ABM77036.1| Hypothetical protein P9303_02811 [Prochlorococcus marinus str. MIT
           9303]
          Length = 837

 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 79/350 (22%), Positives = 152/350 (43%), Gaps = 16/350 (4%)

Query: 129 STWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRA 188
           S +   G +   +G+ +++   ++  L  +  +  A    + +      ++ +L+   +A
Sbjct: 57  SLYTNLGVIYKNEGDFKESGRCYRSALRINPFSCDAYTNLSSLAIAENEFTSALDLANKA 116

Query: 189 LQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAA 248
           ++++P+C  A  L  G    +LG L +A  +  ++L+L P+N  A + L  +     E  
Sbjct: 117 IKLNPNCDVA-NLNAGKALLELGDLEQALASTLKSLELQPDNHTAHMNLGSIYQDLGE-- 173

Query: 249 GIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSY 308
            + + +    +  E+ P    AL  L   +   GQ   ++Q   + L      P    ++
Sbjct: 174 -LDQALASTIKYLELKPDNPDALMNLGGIYKDLGQ---LDQALASTLKNLEIKPDNPTAH 229

Query: 309 YNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKV 368
            NL   Y   G+ ++A     +++K +    +    +  LG +   LG+   ALT+  K 
Sbjct: 230 MNLGVIYKDLGNLDQA---LTSTLKSLELQPDNHTAHMNLGSIYQDLGNLDQALTSTLKS 286

Query: 369 LEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTG-- 426
           LE+  DN + L  LG IY  LG +++A     K+ ++ P +  A  +LG   I  + G  
Sbjct: 287 LELKRDNPDALTNLGGIYKDLGNLDQALTSTLKSLELKPNNPDALTNLGG--IYKEQGQL 344

Query: 427 -AALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
             AL A+K A TL  K    V    L     +H +  E  S   +++  +
Sbjct: 345 DQALTAYKKASTLAPKELRHVAASTL-FFSDLHKDNDEINSERTAYRQGI 393



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 73/303 (24%), Positives = 128/303 (42%), Gaps = 44/303 (14%)

Query: 107 EEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALL 166
           E  F  A    NKA +++ +     +  G+ LL  G++EQA ++    LE   DN  A +
Sbjct: 103 ENEFTSALDLANKAIKLNPNCDVANLNAGKALLELGDLEQALASTLKSLELQPDNHTAHM 162

Query: 167 GQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQL 226
               +  + G    +L    + L++ P  P A+ + +G     LGQL +A  +  + L++
Sbjct: 163 NLGSIYQDLGELDQALASTIKYLELKPDNPDAL-MNLGGIYKDLGQLDQALASTLKNLEI 221

Query: 227 DPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFL 286
            P+N  A + L V          I K +  + +A                         L
Sbjct: 222 KPDNPTAHMNLGV----------IYKDLGNLDQA-------------------------L 246

Query: 287 VEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYY 346
              L    L   NH      ++ NL   Y   G+ ++A     +++K +    +      
Sbjct: 247 TSTLKSLELQPDNH-----TAHMNLGSIYQDLGNLDQA---LTSTLKSLELKRDNPDALT 298

Query: 347 GLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKID 406
            LG +   LG+   ALT+  K LE+ P+N + L  LG IY + GQ+++A    +KA+ + 
Sbjct: 299 NLGGIYKDLGNLDQALTSTLKSLELKPNNPDALTNLGGIYKEQGQLDQALTAYKKASTLA 358

Query: 407 PRD 409
           P++
Sbjct: 359 PKE 361



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 88/343 (25%), Positives = 144/343 (41%), Gaps = 42/343 (12%)

Query: 308 YYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEK 367
           Y+N A   H++GD ++A L Y+ S+    +       Y  LG +    GDF+ +   +  
Sbjct: 25  YFNKAVKSHAQGDIQQAKLLYLKSIANGLENESL---YTNLGVIYKNEGDFKESGRCYRS 81

Query: 368 VLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTG 426
            L I P +C+    L  + +   +   A +L  KA K++P    A ++ G+ L+   D  
Sbjct: 82  ALRINPFSCDAYTNLSSLAIAENEFTSALDLANKAIKLNPNCDVANLNAGKALLELGDLE 141

Query: 427 AALDAFKTARTLLKKAGEEVPIE--VLNNIGVIHFEKGEFESAHQSF----------KDA 474
            AL     A TL  K+ E  P       N+G I+ + GE + A  S            DA
Sbjct: 142 QAL-----ASTL--KSLELQPDNHTAHMNLGSIYQDLGELDQALASTIKYLELKPDNPDA 194

Query: 475 LGD--GIWLTL------LDSKTKTYVI---DASASM---LQFKDM-QLFHRFENDGNHVE 519
           L +  GI+  L      L S  K   I   + +A M   + +KD+  L     +    +E
Sbjct: 195 LMNLGGIYKDLGQLDQALASTLKNLEIKPDNPTAHMNLGVIYKDLGNLDQALTSTLKSLE 254

Query: 520 LPWNKVTVLFNLARLLEQIH--DTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQL 577
           L  +  T   NL  + + +   D    S L  L L +  D  DA   L  I K   NL  
Sbjct: 255 LQPDNHTAHMNLGSIYQDLGNLDQALTSTLKSLELKR--DNPDALTNLGGIYKDLGNLDQ 312

Query: 578 SIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAAS 620
           ++    ++L++    P+AL+ LG +  +     +A   ++ AS
Sbjct: 313 ALTSTLKSLELKPNNPDALTNLGGIYKEQGQLDQALTAYKKAS 355


>gi|386391704|ref|ZP_10076485.1| TPR repeat-containing protein [Desulfovibrio sp. U5L]
 gi|385732582|gb|EIG52780.1| TPR repeat-containing protein [Desulfovibrio sp. U5L]
          Length = 1112

 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 77/311 (24%), Positives = 144/311 (46%), Gaps = 51/311 (16%)

Query: 117 YNKASRIDMHEPSTWVGKGQLLLAK-GEVEQASSAFKIVLEAD-RDNVPALLGQACVEFN 174
           Y KA  +D  + + W+G G LL    G   ++  A++  +E D + + P +     ++ +
Sbjct: 654 YRKAIELDAKKDAPWIGLGNLLQKHLGRYAESEEAYRKAIELDAKKDAPWIGLGNLLQKH 713

Query: 175 RGRYSDSLEFYKRALQVHPSCPGAIRL-GIG-LCRYKLGQLGKARQAFQRALQLDPENVE 232
            GRY++S E Y++A+++ P    AI   G+G L +  LG+  +A  A+++A++LDP+   
Sbjct: 714 PGRYAESEEAYRKAIELDPK--EAISWNGLGNLLKGHLGRHEEAETAYRKAIELDPKYA- 770

Query: 233 ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTE 292
                                          YP+  +  N L +H    G+H   E    
Sbjct: 771 -------------------------------YPWNGLG-NLLKDHL---GRHEEAETAYR 795

Query: 293 TALAVTNHGPTKSHSYYNLARSYHSK-GDYEKAGLYYMASVKEINKPHEFIFPYYGLGQV 351
            A+ +    P  ++ +  L        G YE+A   Y  ++ E++ P E  +P+ GLG +
Sbjct: 796 KAIELD---PKYAYPWIGLGNLLQDHFGRYEEAETAYRKAI-ELD-PKE-AYPWIGLGNL 849

Query: 352 -QLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYV-QLGQIEKAQELLRKAAKIDPRD 409
            Q   G +  +   + K +E+ P    +   LG++     G+ E+++   RKA ++DP++
Sbjct: 850 LQDHFGRYEESEAAYRKAIELDPKEAISWNGLGNLLQDHFGRYEESEAAYRKAIELDPKE 909

Query: 410 AQAFIDLGELL 420
           A ++  LG LL
Sbjct: 910 AISWNGLGNLL 920



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 74/308 (24%), Positives = 136/308 (44%), Gaps = 57/308 (18%)

Query: 176 GRYSDSLEFYKRALQVHPSCPGAIRLGIG-LCRYKLGQLGKARQAFQRALQLDPENVEAL 234
           GRY +S E Y++A+++  +   A  +G+G L +  LG+  ++ +A+++A++LD +     
Sbjct: 645 GRYEESEEAYRKAIELD-AKKDAPWIGLGNLLQKHLGRYAESEEAYRKAIELDAKKDAPW 703

Query: 235 VALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETA 294
           + L   +L         +  E  ++A E+ P  A++ N L N                  
Sbjct: 704 IGLG--NLLQKHPGRYAESEEAYRKAIELDPKEAISWNGLGNLL---------------- 745

Query: 295 LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQV-QL 353
                    K H    L R   ++  Y KA          I    ++ +P+ GLG + + 
Sbjct: 746 ---------KGH----LGRHEEAETAYRKA----------IELDPKYAYPWNGLGNLLKD 782

Query: 354 KLGDFRSALTNFEKVLEIYPDNCETLKALGHIYV-QLGQIEKAQELLRKAAKIDPRDAQA 412
            LG    A T + K +E+ P        LG++     G+ E+A+   RKA ++DP++A  
Sbjct: 783 HLGRHEEAETAYRKAIELDPKYAYPWIGLGNLLQDHFGRYEEAETAYRKAIELDPKEAYP 842

Query: 413 FIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVL--NNIGVI---HFEKGEFESA 467
           +I LG LL           ++ +    +KA E  P E +  N +G +   HF  G +E +
Sbjct: 843 WIGLGNLLQDH-----FGRYEESEAAYRKAIELDPKEAISWNGLGNLLQDHF--GRYEES 895

Query: 468 HQSFKDAL 475
             +++ A+
Sbjct: 896 EAAYRKAI 903


>gi|93279690|pdb|2FO7|A Chain A, Crystal Structure Of An 8 Repeat Consensus Tpr Superhelix
           (Trigonal Crystal Form)
 gi|168177007|pdb|2HYZ|A Chain A, Crystal Structure Of An 8 Repeat Consensus Tpr Superhelix
           (Orthorombic Crystal Form)
          Length = 136

 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 75/135 (55%), Gaps = 4/135 (2%)

Query: 305 SHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTN 364
           + ++YNL  +Y+ +GDY++A  YY  +++   +  E    +Y LG    K GD+  A+  
Sbjct: 1   AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAE---AWYNLGNAYYKQGDYDEAIEY 57

Query: 365 FEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLI-SS 423
           ++K LE+ P + E    LG+ Y + G  ++A E  +KA ++DPR A+A+ +LG       
Sbjct: 58  YQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQG 117

Query: 424 DTGAALDAFKTARTL 438
           D   A++ ++ A  L
Sbjct: 118 DYDEAIEYYQKALEL 132



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 72/132 (54%), Gaps = 6/132 (4%)

Query: 345 YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAK 404
           +Y LG    K GD+  A+  ++K LE+ P + E    LG+ Y + G  ++A E  +KA +
Sbjct: 4   WYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALE 63

Query: 405 IDPRDAQAFIDLGELLI-SSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGE 463
           +DPR A+A+ +LG       D   A++ ++ A  L  ++      E   N+G  ++++G+
Sbjct: 64  LDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSA-----EAWYNLGNAYYKQGD 118

Query: 464 FESAHQSFKDAL 475
           ++ A + ++ AL
Sbjct: 119 YDEAIEYYQKAL 130



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 72/135 (53%), Gaps = 6/135 (4%)

Query: 274 LANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK 333
           L N ++  G +    +  + AL +    P  + ++YNL  +Y+ +GDY++A  YY  +++
Sbjct: 7   LGNAYYKQGDYDEAIEYYQKALELD---PRSAEAWYNLGNAYYKQGDYDEAIEYYQKALE 63

Query: 334 EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIE 393
              +  E    +Y LG    K GD+  A+  ++K LE+ P + E    LG+ Y + G  +
Sbjct: 64  LDPRSAE---AWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYD 120

Query: 394 KAQELLRKAAKIDPR 408
           +A E  +KA ++DPR
Sbjct: 121 EAIEYYQKALELDPR 135



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 65/133 (48%), Gaps = 5/133 (3%)

Query: 96  LGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVL 155
           LG    KQ + +E    A +YY KA  +D      W   G     +G+ ++A   ++  L
Sbjct: 7   LGNAYYKQGDYDE----AIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKAL 62

Query: 156 EADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGK 215
           E D  +  A        + +G Y +++E+Y++AL++ P    A    +G   YK G   +
Sbjct: 63  ELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAW-YNLGNAYYKQGDYDE 121

Query: 216 ARQAFQRALQLDP 228
           A + +Q+AL+LDP
Sbjct: 122 AIEYYQKALELDP 134



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 65/136 (47%), Gaps = 4/136 (2%)

Query: 130 TWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRAL 189
            W   G     +G+ ++A   ++  LE D  +  A        + +G Y +++E+Y++AL
Sbjct: 3   AWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKAL 62

Query: 190 QVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAG 249
           ++ P    A    +G   YK G   +A + +Q+AL+LDP + EA   L     +  +   
Sbjct: 63  ELDPRSAEAW-YNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGD--- 118

Query: 250 IRKGMEKMQRAFEIYP 265
             + +E  Q+A E+ P
Sbjct: 119 YDEAIEYYQKALELDP 134


>gi|118369961|ref|XP_001018183.1| TPR Domain containing protein [Tetrahymena thermophila]
 gi|89299950|gb|EAR97938.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
          Length = 3418

 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 75/345 (21%), Positives = 155/345 (44%), Gaps = 51/345 (14%)

Query: 85   ILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEV 144
            +LN LG+ Y   GK E            A Q +++  ++D +    +   G    AKG+ 
Sbjct: 3029 MLNNLGIIYRQKGKYEK-----------AIQLFSQCIKLDQYFCDYFTNLGLCYYAKGDY 3077

Query: 145  EQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIG 204
            + A + F+     DR NV  LL  A     +G    ++++ ++ ++++P+   A    +G
Sbjct: 3078 DGAINYFQKGYTLDRINVECLLNLASALKAKGEPQQAIKYLQKIIKINPNYTAAY-YNLG 3136

Query: 205  LCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIY 264
            + + + G +  A+ +F+ +++ DP ++ +++ LA++  + N+    +K +   ++A EI 
Sbjct: 3137 IIQKQNGNISDAQTSFKLSIEKDPYHINSVIQLAIIYREQNDYDNSKKLL---KQALEID 3193

Query: 265  PYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 324
                +A   +A  +    +H   ++L    L   ++ P  +   +N+      + +Y++A
Sbjct: 3194 SNNELANFNIALLYRQKCKH--AKELN-ALLKALSYSPKNAKYLHNIGICQRLQENYQEA 3250

Query: 325  GLYYMASVK------------------------EIN--------KPHEFIFPYYGLGQVQ 352
             +Y+  SV+                        EIN         P+ F   +Y LG   
Sbjct: 3251 LIYFKQSVQIDSENAKYYYNLADIYNCLKMPIEEINCYMKCIQLNPN-FERAHYNLGIAY 3309

Query: 353  LKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQE 397
              + +++ A++ FEK +EI P N +   +LG+IY      EK+ E
Sbjct: 3310 ENIKNYKEAISCFEKCIEIAPSNDQYFFSLGNIYSLQRNFEKSNE 3354



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 72/342 (21%), Positives = 155/342 (45%), Gaps = 32/342 (9%)

Query: 87   NALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQ 146
            N  G     L K+ T+ ++ EE    A ++  ++ RI  + P   +   Q L++  + ++
Sbjct: 1566 NCSGFCLYQLSKLSTQHKKIEE----AVEHLKQSVRISPNYPPFRLAFAQNLISLLKYDK 1621

Query: 147  ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 206
            AS   + +L+ D +N  A       ++ + ++  ++++        P+    I+L IG C
Sbjct: 1622 ASEELEKILQQDSENYDANHFMGICQYQKNQFKSAIQYLSVCEAQKPNTYEIIKL-IGQC 1680

Query: 207  RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY 266
              ++ Q  KA Q F+  +  +P++ E L+ LA       +   +++ +E  Q+AF+    
Sbjct: 1681 HKQMNQTEKAIQFFELCIDQNPKDAEVLILLAE---SLYKQGDVKQTLEMYQKAFK---- 1733

Query: 267  CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARS-----YHSKGDY 321
                 N   + +F+     L E        +      K +S  + A++     Y + GD 
Sbjct: 1734 ----YNTKDSQYFYQYAKILFETKDFNQAIIFAQECIKINSSLDNAQNLLGLCYMNIGDM 1789

Query: 322  EKAGLYYMASVK---EINKPH-EFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCE 377
             KA    +A+ K   +IN+ H +++     LG+  +K G    A++   K + +YPD  E
Sbjct: 1790 NKA----IAAFKKQGQINRLHKDYLL---NLGKAYIKKGQTVDAISTLSKFMNLYPDIEE 1842

Query: 378  TLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGEL 419
            T + L +++    Q +K  ++L+   +  P+  +  +++ ++
Sbjct: 1843 TYELLNYLFDLQQQPKKQIKILQNLLEKYPKKTKLNLNIADI 1884



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 75/376 (19%), Positives = 168/376 (44%), Gaps = 24/376 (6%)

Query: 105  EKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPA 164
            E+++ ++ A  +Y K ++I+            + ++     QA      ++E    +   
Sbjct: 2902 EQDQQYLEALIHYQKQTQINPENTEILFKMALIQISYDNFNQAKQLIDKLIELKPQDYLV 2961

Query: 165  LLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRAL 224
               QA +   +G   ++++ + ++L + P+    +   + LC  +LG + + ++ ++   
Sbjct: 2962 YSAQAYLYKRQGNLQEAIKSFDQSLSIQPTNTFTL-FNLALCHGELGNIKQEKKMYKEIQ 3020

Query: 225  QLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQH 284
            ++ P + + L  L ++  Q        KG  K ++A +++  C     Y  ++F   G  
Sbjct: 3021 KISPNDRKMLNNLGIIYRQ--------KG--KYEKAIQLFSQCIKLDQYFCDYFTNLGLC 3070

Query: 285  FLVEQLTETALAVTNHGPT----KSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHE 340
            +  +   + A+     G T          NLA +  +KG+ ++A + Y+  + +IN P+ 
Sbjct: 3071 YYAKGDYDGAINYFQKGYTLDRINVECLLNLASALKAKGEPQQA-IKYLQKIIKIN-PN- 3127

Query: 341  FIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLR 400
            +   YY LG +Q + G+   A T+F+  +E  P +  ++  L  IY +    + +++LL+
Sbjct: 3128 YTAAYYNLGIIQKQNGNISDAQTSFKLSIEKDPYHINSVIQLAIIYREQNDYDNSKKLLK 3187

Query: 401  KAAKIDPRDAQAFIDLGELLISSDTGAA-LDAFKTARTLLKKAGEEVPIEVLNNIGVIHF 459
            +A +ID  +  A  ++  L       A  L+A   A +   K       + L+NIG+   
Sbjct: 3188 QALEIDSNNELANFNIALLYRQKCKHAKELNALLKALSYSPKNA-----KYLHNIGICQR 3242

Query: 460  EKGEFESAHQSFKDAL 475
             +  ++ A   FK ++
Sbjct: 3243 LQENYQEALIYFKQSV 3258



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 75/347 (21%), Positives = 149/347 (42%), Gaps = 58/347 (16%)

Query: 126  HEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDN--VPALLGQACVEFNRGRYSDSLE 183
            ++P       ++L  +G +  +   ++  L ++ ++  V  LLG+A +E   G    ++ 
Sbjct: 2821 NDPEVIKLHAKVLQQQGNLSSSIIQYQKYLSSNPNSYEVQYLLGKARLEI--GCPDQAIY 2878

Query: 184  FYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQ 243
              K+ LQ++P  P  I   +G    +  Q  +A   +Q+  Q++PEN E L  +A++ + 
Sbjct: 2879 SLKKCLQLNPKFPN-INGILGEAYEQDQQYLEALIHYQKQTQINPENTEILFKMALIQIS 2937

Query: 244  ANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLT--ETALAVTNHG 301
             +     ++ ++K+    E+ P     L Y A  + +  Q  L E +   + +L++    
Sbjct: 2938 YDNFNQAKQLIDKL---IELKP--QDYLVYSAQAYLYKRQGNLQEAIKSFDQSLSIQ--- 2989

Query: 302  PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSA 361
            PT + + +NLA  +                                      +LG+ +  
Sbjct: 2990 PTNTFTLFNLALCHG-------------------------------------ELGNIKQE 3012

Query: 362  LTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLI 421
               ++++ +I P++ + L  LG IY Q G+ EKA +L  +  K+D      F +LG    
Sbjct: 3013 KKMYKEIQKISPNDRKMLNNLGIIYRQKGKYEKAIQLFSQCIKLDQYFCDYFTNLGLCYY 3072

Query: 422  S-SDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESA 467
            +  D   A++ F+   TL     + + +E L N+      KGE + A
Sbjct: 3073 AKGDYDGAINYFQKGYTL-----DRINVECLLNLASALKAKGEPQQA 3114



 Score = 45.4 bits (106), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 72/332 (21%), Positives = 146/332 (43%), Gaps = 37/332 (11%)

Query: 112  LATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACV 171
            L+  YYN++ ++D     ++   G LL  +   E +  +    ++ D+ ++ A   +  +
Sbjct: 1171 LSIGYYNRSLKLDQKNAESYYRTGILLFKQNMFENSIKSLNNCIKIDKYHLGA--HEQLI 1228

Query: 172  EFNRGRYSDSLEFY-KRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPEN 230
            +    + +  LE Y K+ L+       A +  I   + K     K  Q  Q   +++P N
Sbjct: 1229 QIYEVQQNKELEIYHKKTLKE----SKAFKKYIYYMQNK--DYEKCIQLLQEWEEINPTN 1282

Query: 231  VEALVALA----VMDLQANEAAGIRKGME-------KMQRAFEIYPYCAMALNYLANHFF 279
             E    L+    ++  + ++   +++ +         +QR +E+   C      LA   F
Sbjct: 1283 DECQYYLSDLMRIIGKKDSQVHYLKQCLTLNPTHELALQRKYELQNSCQNE--QLAQTIF 1340

Query: 280  FT--GQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYH--SKGDYEKAGLYYMASVKEI 335
            +    QH   E + +      N    +S+SY +     +  SK D  KA LY+     + 
Sbjct: 1341 YEELDQHNNWEYVEQEENEFQNLLSIRSNSYISFKSGLYMKSKQDLSKAFLYFEEYSNQ- 1399

Query: 336  NKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYP-DNCETLKALGHIYVQLGQIEK 394
             +P++++  +Y LG ++ K  +F  A   + K L++ P DN  +   LG +Y+ + ++E+
Sbjct: 1400 -QPNDYL-GFYLLGHIEEKNCNFEVAANFYLKSLQLKPEDNFNSNNRLGIVYLNMKKVEE 1457

Query: 395  AQELLRKAAKIDPRD-------AQAFIDLGEL 419
            A + L +A KI  ++       AQ +  LG+ 
Sbjct: 1458 ALKYLNEAKKIIHKEEINICAIAQCYSSLGQF 1489



 Score = 41.6 bits (96), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 47/204 (23%), Positives = 87/204 (42%), Gaps = 47/204 (23%)

Query: 96   LGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVL 155
            LG ++ KQ++ +E    A   +NKA +++ ++P  +   G+L   + E  +A + F+  L
Sbjct: 2294 LGVLKKKQKKYDE----ARSSFNKAIQLNSNDPLYYEAFGKLEYGQKEYLKACNHFEKYL 2349

Query: 156  EADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLG------------- 202
            +   +  P +     +  N   Y + ++ YK A+ +   C  ++ +              
Sbjct: 2350 QKVAN--PEI---EIINLNAQSYYN-IKMYKEAINL---CDKSVEICLQDDNQKKQILSK 2400

Query: 203  ----IGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQ 258
                IGLC Y+  +  KA + F ++   DP+N E+   L            I K + + Q
Sbjct: 2401 SYHLIGLCYYQQSEYKKAEEFFLKSTNADPQNSESFFWL----------GNILKLLNEQQ 2450

Query: 259  RAFEIYPYC-------AMALNYLA 275
             A + Y  C       A+ LNYL 
Sbjct: 2451 EAKKAYLTCLSLNKEHALCLNYLG 2474


>gi|119952992|ref|YP_945201.1| tetratricopeptide repeat family protein [Borrelia turicatae 91E135]
 gi|119861763|gb|AAX17531.1| tetratricopeptide repeat family protein [Borrelia turicatae 91E135]
          Length = 380

 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 72/318 (22%), Positives = 134/318 (42%), Gaps = 14/318 (4%)

Query: 123 IDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSL 182
           +D+ E S    +G  L+ +  + +A + F  +L+ D DN  AL+G   +E  +  +  ++
Sbjct: 22  LDVTEKSK---RGYQLIKEERLPEAEALFNDILQKDYDNNYALVGLGDIERKKRNFDKAI 78

Query: 183 EFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDL 242
            +Y++ L  H +   A+  G+G C   LG   KA   ++  L+ DPEN+  L  +A    
Sbjct: 79  IYYQKCLAKHSNNNYAL-FGLGDCYRSLGDYKKATDVWEEYLKYDPENITVLTRVAS--- 134

Query: 243 QANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGP 302
              +    +K  +   R  E  P    AL  +  H ++  + +         +   N   
Sbjct: 135 SYRKLKNFQKSRQSYLRVLEFVPDNDYALVGIG-HLYYDFKEYKEALKYWLRMYEINQVK 193

Query: 303 TKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSAL 362
                  ++   Y    ++ K G+Y+     EI+ P+ F +  +GL        ++  AL
Sbjct: 194 IDVRVLTSIGNCYRKLKEFSK-GIYFFKRALEIS-PNNF-YAIFGLADCYRGSKEYHEAL 250

Query: 363 TNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS 422
             +  +++  P N   L  +G  Y  L + E +Q   +KA  +   D   F  LG  L+ 
Sbjct: 251 KYWLTIIDKDPKNNLVLTRVGDTYRYLKEYENSQIYYKKALDV---DFDMFAILGLALLQ 307

Query: 423 SDTGAALDAFKTARTLLK 440
            + G   +A    + L+K
Sbjct: 308 KEQGQYEEALSAIKNLIK 325



 Score = 59.7 bits (143), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 68/305 (22%), Positives = 131/305 (42%), Gaps = 15/305 (4%)

Query: 96  LGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVL 155
           LG IE K+R    +F  A  YY K      +      G G    + G+ ++A+  ++  L
Sbjct: 64  LGDIERKKR----NFDKAIIYYQKCLAKHSNNNYALFGLGDCYRSLGDYKKATDVWEEYL 119

Query: 156 EADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGK 215
           + D +N+  L   A        +  S + Y R L+  P    A+ +GIG   Y   +  +
Sbjct: 120 KYDPENITVLTRVASSYRKLKNFQKSRQSYLRVLEFVPDNDYAL-VGIGHLYYDFKEYKE 178

Query: 216 ARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLA 275
           A + + R  +++   ++  V  ++ +    +     KG+   +RA EI P    A+  LA
Sbjct: 179 ALKYWLRMYEINQVKIDVRVLTSIGNCY-RKLKEFSKGIYFFKRALEISPNNFYAIFGLA 237

Query: 276 NHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEI 335
           + +  + ++    +  +  L + +  P  +     +  +Y    +YE + +YY  ++   
Sbjct: 238 DCYRGSKEY---HEALKYWLTIIDKDPKNNLVLTRVGDTYRYLKEYENSQIYYKKAL--- 291

Query: 336 NKPHEF-IFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK 394
               +F +F   GL  +Q + G +  AL+  + +++  P N          Y  LGQIE 
Sbjct: 292 --DVDFDMFAILGLALLQKEQGQYEEALSAIKNLIKTNPKNSILYVNAAECYEALGQIES 349

Query: 395 AQELL 399
           A ++L
Sbjct: 350 AVDIL 354



 Score = 45.1 bits (105), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 38/158 (24%), Positives = 73/158 (46%), Gaps = 5/158 (3%)

Query: 318 KGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCE 377
           K +++KA +YY   + + +  +  +F   GLG     LGD++ A   +E+ L+  P+N  
Sbjct: 71  KRNFDKAIIYYQKCLAKHSNNNYALF---GLGDCYRSLGDYKKATDVWEEYLKYDPENIT 127

Query: 378 TLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTART 437
            L  +   Y +L   +K+++   +  +  P +  A + +G L    D     +A K    
Sbjct: 128 VLTRVASSYRKLKNFQKSRQSYLRVLEFVPDNDYALVGIGHLYY--DFKEYKEALKYWLR 185

Query: 438 LLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
           + +    ++ + VL +IG  + +  EF      FK AL
Sbjct: 186 MYEINQVKIDVRVLTSIGNCYRKLKEFSKGIYFFKRAL 223


>gi|196232458|ref|ZP_03131311.1| TPR repeat-containing protein [Chthoniobacter flavus Ellin428]
 gi|196223530|gb|EDY18047.1| TPR repeat-containing protein [Chthoniobacter flavus Ellin428]
          Length = 747

 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 69/276 (25%), Positives = 117/276 (42%), Gaps = 49/276 (17%)

Query: 201 LGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRA 260
           L +GL  ++ G+L +A   ++  L+  P++++AL  L V  +Q   A             
Sbjct: 8   LELGLQHHQAGRLAEAEACYREILEAQPDHLDALHLLGVAAMQTGRA------------- 54

Query: 261 FEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGD 320
                                     V  L   A  V NH    S    NL  +Y   G 
Sbjct: 55  -----------------------ELAVNLLNRVAALVPNHPAVHS----NLGEAYRGLGK 87

Query: 321 YEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLK 380
           +E+A   +  +++   KP + +   Y LG V ++ G    A+  + +VL + PD  +   
Sbjct: 88  FEEAVASFRRALQL--KPDD-VLAQYNLGNVLVEWGKLEEAIAAYRRVLTLKPDYVDAHN 144

Query: 381 ALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDT-GAALDAFKTARTLL 439
            LG    + G + +A E+LR+A ++ P DA A+ + G +L      G A++A++ A  L 
Sbjct: 145 NLGIALARQGVMTEATEVLRRALQLAPADAGAWNNFGIVLAEQGRFGEAVEAYRRALELA 204

Query: 440 KKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
                    E  NN G    E G+FESA  +++ A+
Sbjct: 205 PNQ-----PEAHNNFGNACKELGQFESAVAAYRRAV 235



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 64/280 (22%), Positives = 122/280 (43%), Gaps = 12/280 (4%)

Query: 142 GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 201
           G + +A + ++ +LEA  D++ AL          GR   ++    R   + P+ P A+  
Sbjct: 18  GRLAEAEACYREILEAQPDHLDALHLLGVAAMQTGRAELAVNLLNRVAALVPNHP-AVHS 76

Query: 202 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 261
            +G     LG+  +A  +F+RALQL P++V A   L  + +   E   + + +   +R  
Sbjct: 77  NLGEAYRGLGKFEEAVASFRRALQLKPDDVLAQYNLGNVLV---EWGKLEEAIAAYRRVL 133

Query: 262 EIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDY 321
            + P    A N L       G   ++ + TE         P  + ++ N       +G +
Sbjct: 134 TLKPDYVDAHNNLGIALARQG---VMTEATEVLRRALQLAPADAGAWNNFGIVLAEQGRF 190

Query: 322 EKAGLYYMASVK-EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLK 380
            +A   Y  +++   N+P      +   G    +LG F SA+  + + +E+ PD+ E   
Sbjct: 191 GEAVEAYRRALELAPNQPEA----HNNFGNACKELGQFESAVAAYRRAVELRPDSAEFQA 246

Query: 381 ALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 420
            LG+   + G+ ++A    R A  + P+ A+   ++G  L
Sbjct: 247 NLGNGLREQGRFDEAMAAYRHALALQPKRAETHHEMGNAL 286



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 79/326 (24%), Positives = 135/326 (41%), Gaps = 35/326 (10%)

Query: 86  LNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVE 145
           L+ LGV     G+ E           LA    N+ + +  + P+     G+     G+ E
Sbjct: 41  LHLLGVAAMQTGRAE-----------LAVNLLNRVAALVPNHPAVHSNLGEAYRGLGKFE 89

Query: 146 QASSAFKIVLEADRDNVPAL--LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGA-IRLG 202
           +A ++F+  L+   D+V A   LG   VE+  G+  +++  Y+R L + P    A   LG
Sbjct: 90  EAVASFRRALQLKPDDVLAQYNLGNVLVEW--GKLEEAIAAYRRVLTLKPDYVDAHNNLG 147

Query: 203 IGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFE 262
           I L R   G + +A +  +RALQL P +  A     ++     E     + +E  +RA E
Sbjct: 148 IALARQ--GVMTEATEVLRRALQLAPADAGAWNNFGIV---LAEQGRFGEAVEAYRRALE 202

Query: 263 IYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG----PTKSHSYYNLARSYHSK 318
           + P    A N   N     GQ        E+A+A         P  +    NL      +
Sbjct: 203 LAPNQPEAHNNFGNACKELGQF-------ESAVAAYRRAVELRPDSAEFQANLGNGLREQ 255

Query: 319 GDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCET 378
           G +++A   Y  ++    K  E    ++ +G      G   +A+  +   LE+ PD    
Sbjct: 256 GRFDEAMAAYRHALALQPKRAE---THHEMGNALAGQGQLDAAVLAYRATLELKPDYGVA 312

Query: 379 LKALGHIYVQLGQIEKAQELLRKAAK 404
              LG++    G +++A    R+AA+
Sbjct: 313 RCNLGNVLRDQGMLDEAIAAYRRAAE 338



 Score = 44.3 bits (103), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 49/198 (24%), Positives = 76/198 (38%), Gaps = 19/198 (9%)

Query: 544 ASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLE 603
           A   YR IL    D++DA   L   A      +L++ L+N    +   +P   S LG+  
Sbjct: 23  AEACYREILEAQPDHLDALHLLGVAAMQTGRAELAVNLLNRVAALVPNHPAVHSNLGEAY 82

Query: 604 LKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKEL 663
                + +A  +FR A       D  A  +LGN               +E   LE+A   
Sbjct: 83  RGLGKFEEAVASFRRALQLKP-DDVLAQYNLGN-------------VLVEWGKLEEAIAA 128

Query: 664 YTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHV 723
           Y RV+      + A N  G+ LA +G    + ++  +  + A           W N   V
Sbjct: 129 YRRVLTLKPDYVDAHNNLGIALARQGVMTEATEVLRRALQLAPADA-----GAWNNFGIV 183

Query: 724 YFAQGNFALAMKMYQNCL 741
              QG F  A++ Y+  L
Sbjct: 184 LAEQGRFGEAVEAYRRAL 201


>gi|220907898|ref|YP_002483209.1| hypothetical protein Cyan7425_2491 [Cyanothece sp. PCC 7425]
 gi|219864509|gb|ACL44848.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7425]
          Length = 689

 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 83/336 (24%), Positives = 148/336 (44%), Gaps = 18/336 (5%)

Query: 142 GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 201
           GE+ +AS  ++ VL+     + AL     +   +G    ++ ++++A+QV P+    +  
Sbjct: 18  GELAEASQLYQRVLQQHPGQLDALQVLGMIAAQQGDVETAISYFRQAVQVAPA-QADLHY 76

Query: 202 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 261
            +G      G    A  A+Q+AL+L+  ++ A   L  + LQ  E AG    +   Q A 
Sbjct: 77  NLGYALEAWGDGPAAIAAYQQALKLNRNHLAACYNLGELHLQRGEYAG---AIPCFQWAI 133

Query: 262 EIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDY 321
           ++ P  ++A   L       G           AL +    P    ++ NL  +Y   G  
Sbjct: 134 QLQPDLSLAHYKLGTALQQQGDPKAAVSCYLQALQLQ---PDLVVAHCNLGSAYLDLGQL 190

Query: 322 EKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKA 381
           E A +    S  ++   H      + LG  +      R A+  +EKV+++ P N E    
Sbjct: 191 E-AAITAFQSALQLQPDHTGAL--FNLGLARQTQQQMREAIACYEKVIQLEPQNSEVYNN 247

Query: 382 LGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLI--SSDTGAALDAFKTARTLL 439
           LG+ Y+ +GQ E+A ++ R A  + P D   + +LG+ L+  +  TGAA       R +L
Sbjct: 248 LGNAYLAVGQPERAIDVFRWATALKPDDLTLWYNLGKTLLEQADWTGAA----ACFRHVL 303

Query: 440 KKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
               +   I VL  +G     +G+  +A  +++ AL
Sbjct: 304 ALNPQLSYIHVL--LGSALVGQGDLPAASAAYQQAL 337



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 102/381 (26%), Positives = 159/381 (41%), Gaps = 47/381 (12%)

Query: 64  EEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRI 123
           + G   E  + Y  V  +    L+AL V    LG I  +Q + E     A  Y+ +A ++
Sbjct: 16  QAGELAEASQLYQRVLQQHPGQLDALQV----LGMIAAQQGDVET----AISYFRQAVQV 67

Query: 124 DMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLE 183
              +       G  L A G+   A +A++  L+ +R+++ A      +   RG Y+ ++ 
Sbjct: 68  APAQADLHYNLGYALEAWGDGPAAIAAYQQALKLNRNHLAACYNLGELHLQRGEYAGAIP 127

Query: 184 FYKRALQVHPSCPGAIRLGIGLCRYKLG----QLGKARQA---FQRALQLDPENVEALVA 236
            ++ A+Q+ P         + L  YKLG    Q G  + A   + +ALQL P+ V A   
Sbjct: 128 CFQWAIQLQPD--------LSLAHYKLGTALQQQGDPKAAVSCYLQALQLQPDLVVAHCN 179

Query: 237 L--AVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETA 294
           L  A +DL   EAA     +   Q A ++ P    AL       F  G     +Q    A
Sbjct: 180 LGSAYLDLGQLEAA-----ITAFQSALQLQPDHTGAL-------FNLGLARQTQQQMREA 227

Query: 295 LA----VTNHGPTKSHSYYNLARSYHSKGDYEKA-GLYYMASVKEINKPHEFIFPYYGLG 349
           +A    V    P  S  Y NL  +Y + G  E+A  ++  A+     KP +    +Y LG
Sbjct: 228 IACYEKVIQLEPQNSEVYNNLGNAYLAVGQPERAIDVFRWATAL---KPDDLTL-WYNLG 283

Query: 350 QVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRD 409
           +  L+  D+  A   F  VL + P        LG   V  G +  A    ++A K+DP  
Sbjct: 284 KTLLEQADWTGAAACFRHVLALNPQLSYIHVLLGSALVGQGDLPAASAAYQQALKLDPEL 343

Query: 410 AQAFIDLGE-LLISSDTGAAL 429
             A   +   LL S +  AAL
Sbjct: 344 VAAHHGIASALLESGEVDAAL 364



 Score = 56.2 bits (134), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 72/313 (23%), Positives = 129/313 (41%), Gaps = 52/313 (16%)

Query: 208 YKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYC 267
           Y+ G+L +A Q +QR LQ  P  ++AL  L ++  Q  +   +   +   ++A ++ P  
Sbjct: 15  YQAGELAEASQLYQRVLQQHPGQLDALQVLGMIAAQQGD---VETAISYFRQAVQVAPAQ 71

Query: 268 AMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSY--------------YNLAR 313
           A  L+Y   +                AL     GP    +Y              YNL  
Sbjct: 72  A-DLHYNLGY----------------ALEAWGDGPAAIAAYQQALKLNRNHLAACYNLGE 114

Query: 314 SYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYP 373
            +  +G+Y  A   +  +++   +P +    +Y LG    + GD ++A++ + + L++ P
Sbjct: 115 LHLQRGEYAGAIPCFQWAIQL--QP-DLSLAHYKLGTALQQQGDPKAAVSCYLQALQLQP 171

Query: 374 DNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFK 433
           D       LG  Y+ LGQ+E A    + A ++ P    A  +LG   ++  T   +   +
Sbjct: 172 DLVVAHCNLGSAYLDLGQLEAAITAFQSALQLQPDHTGALFNLG---LARQTQQQM---R 225

Query: 434 TARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTY 491
            A    +K  +  P   EV NN+G  +   G+ E A   F+       W T L     T 
Sbjct: 226 EAIACYEKVIQLEPQNSEVYNNLGNAYLAVGQPERAIDVFR-------WATALKPDDLTL 278

Query: 492 VIDASASMLQFKD 504
             +   ++L+  D
Sbjct: 279 WYNLGKTLLEQAD 291



 Score = 41.2 bits (95), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 37/145 (25%), Positives = 60/145 (41%), Gaps = 9/145 (6%)

Query: 653 EATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQ 712
           +A  L +A +LY RV+ QH   L A    G++ A++G  + +   F Q  + A       
Sbjct: 16  QAGELAEASQLYQRVLQQHPGQLDALQVLGMIAAQQGDVETAISYFRQAVQVAPAQA--- 72

Query: 713 MPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLY-LARTHYEAEQWQDCKK 771
             D+  NL +   A G+   A+  YQ  L+    N +     Y L   H +  ++     
Sbjct: 73  --DLHYNLGYALEAWGDGPAAIAAYQQALK---LNRNHLAACYNLGELHLQRGEYAGAIP 127

Query: 772 SLLRAIHLAPSNYTLRFDAGVAMQK 796
               AI L P      +  G A+Q+
Sbjct: 128 CFQWAIQLQPDLSLAHYKLGTALQQ 152


>gi|91202613|emb|CAJ72252.1| Hypothetical Protein kustd1507 [Candidatus Kuenenia
           stuttgartiensis]
          Length = 700

 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 53/205 (25%), Positives = 99/205 (48%), Gaps = 17/205 (8%)

Query: 282 GQHFLVEQLTETALA----VTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK-EIN 336
           G  ++ + LT+ A++      ++ P  S++YYN+  +Y  K   ++  +++  +++  ++
Sbjct: 482 GTMYIDKGLTDKAISEFSKAIHYDPASSYAYYNMGNAYFDKNALDECIVFFNKAIQLNMH 541

Query: 337 KPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQ 396
           KP  F      LG   LK G+  +A+  + K L IYP   E    LG IY +  + E+A 
Sbjct: 542 KPQVF----NNLGSAYLKKGNPDAAIAQYRKALYIYPGYAEAHSNLGFIYTETNRFEEAL 597

Query: 397 ELLRKAAKIDPRDAQAFIDLGELLISSDTG--AALDAFKTARTLLKKAGEEVPIEVLNNI 454
             L+KA +++P  A A  +LG L         A ++   + R   +  G         N+
Sbjct: 598 SELKKALRLNPDHANAHNNLGALYCRQGLWDLAEMEFLSSIRANPRNIGAR------KNL 651

Query: 455 GVIHFEKGEFESAHQSFKDALGDGI 479
           G+I+F++G+ + A +     L D I
Sbjct: 652 GIIYFQQGKKQEAREQLLHVLKDDI 676



 Score = 41.6 bits (96), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 34/128 (26%), Positives = 56/128 (43%), Gaps = 4/128 (3%)

Query: 348 LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 407
           LG    K GD   A+   E+ + +  D  E   +LG +Y+  G  +KA     KA   DP
Sbjct: 447 LGVFYYKHGDLDRAIGELERAVLLKNDYPEGHNSLGTMYIDKGLTDKAISEFSKAIHYDP 506

Query: 408 RDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESA 467
             + A+ ++G      +   ALD          +     P +V NN+G  + +KG  ++A
Sbjct: 507 ASSYAYYNMGNAYFDKN---ALDECIVFFNKAIQLNMHKP-QVFNNLGSAYLKKGNPDAA 562

Query: 468 HQSFKDAL 475
              ++ AL
Sbjct: 563 IAQYRKAL 570



 Score = 40.8 bits (94), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 33/129 (25%), Positives = 59/129 (45%), Gaps = 3/129 (2%)

Query: 116 YYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNR 175
           ++NKA +++MH+P  +   G   L KG  + A + ++  L        A      +    
Sbjct: 531 FFNKAIQLNMHKPQVFNNLGSAYLKKGNPDAAIAQYRKALYIYPGYAEAHSNLGFIYTET 590

Query: 176 GRYSDSLEFYKRALQVHPSCPGA-IRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEAL 234
            R+ ++L   K+AL+++P    A   LG   CR  L  L  A   F  +++ +P N+ A 
Sbjct: 591 NRFEEALSELKKALRLNPDHANAHNNLGALYCRQGLWDL--AEMEFLSSIRANPRNIGAR 648

Query: 235 VALAVMDLQ 243
             L ++  Q
Sbjct: 649 KNLGIIYFQ 657


>gi|403371722|gb|EJY85745.1| TPR Domain containing protein [Oxytricha trifallax]
          Length = 1558

 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 70/287 (24%), Positives = 116/287 (40%), Gaps = 48/287 (16%)

Query: 135  GQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS 194
            G L L +   E+A+   K  +  ++    AL+    + F  G+ SDSL++YK AL  +  
Sbjct: 1275 GMLYLEQQNYEKAAEMLKQAITVNKQYGVALVTMGNLLFETGQSSDSLKYYKHALAQNEK 1334

Query: 195  CPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGM 254
               A+ +G+G   Y L  + +A   +QR L++D +           D+  N         
Sbjct: 1335 DVQAL-IGLGNAHYDLKNMKRAIGFYQRVLEIDQKQA---------DVHYN--------- 1375

Query: 255  EKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARS 314
                               L N  F +G+   VEQ            P KS +YYNL  +
Sbjct: 1376 -------------------LGNALFLSGE---VEQSVVHYQKAIEQNPQKSEAYYNLGNA 1413

Query: 315  YHSKGDYEKAGLYYMASV--KEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIY 372
               K DY +A   Y  ++     N P       Y +G      G  R A+  + K +EI 
Sbjct: 1414 LCGKSDYIQAVDAYQKTLDLSPQNGP-----ALYNMGNAYYMQGKTREAIDTYSKAIEIN 1468

Query: 373  PDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGEL 419
              + ET   +   Y  +G+I+ A +  +KA  +DP ++  +  L ++
Sbjct: 1469 DKSAETFFNIASAYNDVGEIDHAIKHYQKAIDLDPENSDTYFCLAQI 1515



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 78/348 (22%), Positives = 151/348 (43%), Gaps = 75/348 (21%)

Query: 177  RYSDSLEFYKRALQVH-------PSCPGAI--RLGIGLCRYKLGQLGKARQAFQRALQLD 227
            ++ D++  Y+R+LQ++       P   G I  RLG    R ++  LGK  Q   +A Q  
Sbjct: 1012 KFEDAILSYQRSLQLYENEDDQEPQLLGNIQFRLGWAYIRSRMN-LGKGIQYLTQAQQNI 1070

Query: 228  PENVEALVALA-------------------VMDLQA-NEAAGIRKG--MEKMQRAFEIYP 265
            P N+E  + LA                    +++QA N  + + KG  +++++R  E   
Sbjct: 1071 PNNLEINIKLAGVLFREENKYAEALEYINKALEIQADNIDSQLLKGKILDRLERHLE--- 1127

Query: 266  YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAG 325
              A   N +        +    +++++    +TN     ++S + L ++Y    DY+K  
Sbjct: 1128 -AAEVFNKVLEQQQTQQKMQQEQKISQDQSQITNQ--MVANSVFYLGQTYERMKDYKKCA 1184

Query: 326  LYY--------------------MASVKE-----------INKPHEFIFPYYGLGQV--Q 352
              Y                    +AS+ E           + +  E I   YG+ +   Q
Sbjct: 1185 ALYKKCLTIDSKNLGACVHLANLLASIGEGERALKYFKHALKQEPESISVNYGIAKTIQQ 1244

Query: 353  LKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQA 412
             +  + + A+T++E ++   PD+  +L  LG +Y++    EKA E+L++A  ++ +   A
Sbjct: 1245 FQPQNKQQAITHYEFIIGKEPDHFRSLTQLGMLYLEQQNYEKAAEMLKQAITVNKQYGVA 1304

Query: 413  FIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFE 460
             + +G LL   +TG + D+ K  +  L  A  E  ++ L  +G  H++
Sbjct: 1305 LVTMGNLLF--ETGQSSDSLKYYKHAL--AQNEKDVQALIGLGNAHYD 1348



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 65/318 (20%), Positives = 136/318 (42%), Gaps = 44/318 (13%)

Query: 135  GQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS 194
            GQ      + ++ ++ +K  L  D  N+ A +  A +  + G    +L+++K AL+  P 
Sbjct: 1171 GQTYERMKDYKKCAALYKKCLTIDSKNLGACVHLANLLASIGEGERALKYFKHALKQEPE 1230

Query: 195  CPGAIRLGIGLCR----YKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGI 250
               +I +  G+ +    ++     +A   ++  +  +P++  +L  L ++ L   E    
Sbjct: 1231 ---SISVNYGIAKTIQQFQPQNKQQAITHYEFIIGKEPDHFRSLTQLGMLYL---EQQNY 1284

Query: 251  RKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQ---------HFLV--EQLTETALAVTN 299
             K  E +++A  +     +AL  + N  F TGQ         H L   E+  +  + + N
Sbjct: 1285 EKAAEMLKQAITVNKQYGVALVTMGNLLFETGQSSDSLKYYKHALAQNEKDVQALIGLGN 1344

Query: 300  -HGPTKSHS-------------------YYNLARSYHSKGDYEKAGLYYMASVKEINKPH 339
             H   K+                     +YNL  +    G+ E++ ++Y  ++++  +  
Sbjct: 1345 AHYDLKNMKRAIGFYQRVLEIDQKQADVHYNLGNALFLSGEVEQSVVHYQKAIEQNPQKS 1404

Query: 340  EFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELL 399
            E    YY LG       D+  A+  ++K L++ P N   L  +G+ Y   G+  +A +  
Sbjct: 1405 E---AYYNLGNALCGKSDYIQAVDAYQKTLDLSPQNGPALYNMGNAYYMQGKTREAIDTY 1461

Query: 400  RKAAKIDPRDAQAFIDLG 417
             KA +I+ + A+ F ++ 
Sbjct: 1462 SKAIEINDKSAETFFNIA 1479


>gi|354594397|ref|ZP_09012436.1| hypothetical protein CIN_11320 [Commensalibacter intestini A911]
 gi|353672073|gb|EHD13773.1| hypothetical protein CIN_11320 [Commensalibacter intestini A911]
          Length = 622

 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 78/291 (26%), Positives = 130/291 (44%), Gaps = 15/291 (5%)

Query: 132 VGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQV 191
           +  G  LL+KG++++A   F  +L  D +   AL G+ACV    G ++ ++ F  +A++ 
Sbjct: 7   ISNGLSLLSKGQIQEADEIFCDILTKDPNFSEALYGRACVARASGNHALAIAFAGQAIEQ 66

Query: 192 HPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMD--LQANEAAG 249
                  I LG+ L  Y+ G + +A  A + A+ L+  +  A  ALA++   +  N AA 
Sbjct: 67  KSLSYYYIPLGLSL--YEQGHVAEAEAALKSAVLLNAYDPRAHHALALVQEAIDENSAAE 124

Query: 250 IRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYY 309
           +       ++A E+ P        L   F++ G+ F  +Q    A     +   K    +
Sbjct: 125 L-----SFRKAIELVPASITYWQALI-RFYWQGEAF--DQALNIAKDAVKYNTGKIEFLH 176

Query: 310 NLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVL 369
            LA      G    A   +    K I    + I  Y  LG V  KL   + A  N     
Sbjct: 177 ELALLLERMGMLGDAERVFR---KMIRLNPQSISTYANLGAVLFKLNRLKEAKENLTYAF 233

Query: 370 EIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 420
           E  PD  ET   LG + + LG++  A+ LL+ A +  P D++  ++LG +L
Sbjct: 234 EHEPDVIETQVNLGLVQMALGELLAAKALLQDAYQKAPTDSRIGLNLGTVL 284



 Score = 40.4 bits (93), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 61/281 (21%), Positives = 113/281 (40%), Gaps = 26/281 (9%)

Query: 200 RLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA-VMDLQANEAAGIRKGMEKMQ 258
           ++  GL     GQ+ +A + F   L  DP   EAL   A V     N A  I    + ++
Sbjct: 6   KISNGLSLLSKGQIQEADEIFCDILTKDPNFSEALYGRACVARASGNHALAIAFAGQAIE 65

Query: 259 RAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSK 318
           +    Y Y  + L+      +  G     E   ++A+ +  + P   H+   LA    + 
Sbjct: 66  QKSLSYYYIPLGLS-----LYEQGHVAEAEAALKSAVLLNAYDPRAHHA---LALVQEAI 117

Query: 319 GDYEKAGLYYMASVKEINKPHEF---IFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDN 375
            +   A L +  +++ +     +   +  +Y  G+       F  AL   +  ++     
Sbjct: 118 DENSAAELSFRKAIELVPASITYWQALIRFYWQGEA------FDQALNIAKDAVKYNTGK 171

Query: 376 CETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTA 435
            E L  L  +  ++G +  A+ + RK  +++P+    + +LG +L        L+  K A
Sbjct: 172 IEFLHELALLLERMGMLGDAERVFRKMIRLNPQSISTYANLGAVLFK------LNRLKEA 225

Query: 436 RTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDA 474
           +  L  A E  P  IE   N+G++    GE  +A    +DA
Sbjct: 226 KENLTYAFEHEPDVIETQVNLGLVQMALGELLAAKALLQDA 266


>gi|225850059|ref|YP_002730293.1| hypothetical protein PERMA_0503 [Persephonella marina EX-H1]
 gi|225646356|gb|ACO04542.1| tetratricopeptide repeat domain protein [Persephonella marina
           EX-H1]
          Length = 559

 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 116/464 (25%), Positives = 184/464 (39%), Gaps = 88/464 (18%)

Query: 288 EQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYG 347
           E+  E    +    P K   YY LAR Y  + + E+A       +K + K  E I P Y 
Sbjct: 147 EKAKEVLFKIAKISPKKPRVYYTLARIYLFQNNKEEA-------IKHLKKALE-IEPLYQ 198

Query: 348 -----LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKA 402
                LG++ L+   F+ A   + KVLE  P++ E L  L  +YVQ  Q +KA+E++ + 
Sbjct: 199 PAYVLLGELYLQDRKFKEAEKVYLKVLEKDPNDLEALNRLFQVYVQADQFKKAEEIINRI 258

Query: 403 AKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKG 462
            KIDP +  A +    L +  + G            L++  +E P    +N  V+     
Sbjct: 259 VKIDPSNKDALLKKFLLYLRENKGE------EIIRELEELAKEEP----DNPTVLSILGM 308

Query: 463 EFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPW 522
            +ESA Q +K A  + I+L +L                         + E + + +    
Sbjct: 309 AYESA-QRYKKA--EEIYLKVL-------------------------KLEPENSEI---- 336

Query: 523 NKVTVLFNLARLLEQIHDT----VAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLS 578
                   L RL E    T     A  VL RL     +DY    L +A I   R NL  +
Sbjct: 337 --------LERLAEVYTRTGQYEKALDVLNRLYSLDPRDY-RVLLIMADIENKRGNLDAA 387

Query: 579 IELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDA-TDGKDSYATLSLGNW 637
           +  + EA  +N K P      G    K D W KA+E F+ A +   D  D     +L  +
Sbjct: 388 LSYIQEAKSINDKDPTIYFFEGIYYEKLDQWDKAEEAFKKALELRPDFPD-----ALNYY 442

Query: 638 NYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDL 697
            Y   +RN           +++A ++  + +     +    +  G    +KG++  +   
Sbjct: 443 GYSLIIRN---------RDIDRAMDMIRKALELVPDSAAYLDSLGWGYFKKGEYLKALKY 493

Query: 698 FTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCL 741
             Q  + A        P V  +LA V  A GN   A+K+Y+  L
Sbjct: 494 IKQAYQKAPDD-----PVVTEHLAEVEEALGNKEEALKLYRKAL 532



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 99/392 (25%), Positives = 178/392 (45%), Gaps = 32/392 (8%)

Query: 91  VYYTYLGKIETKQREKEEHFILATQYYNKASRID-MHEPSTWVGKGQLLLAKGEVEQASS 149
           VYYT L +I   Q  KEE    A ++  KA  I+ +++P+ +V  G+L L   + ++A  
Sbjct: 166 VYYT-LARIYLFQNNKEE----AIKHLKKALEIEPLYQPA-YVLLGELYLQDRKFKEAEK 219

Query: 150 AFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYK 209
            +  VLE D +++ AL     V     ++  + E   R +++ PS   A+ L   L   +
Sbjct: 220 VYLKVLEKDPNDLEALNRLFQVYVQADQFKKAEEIINRIVKIDPSNKDAL-LKKFLLYLR 278

Query: 210 LGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAM 269
             +  +  +  +   + +P+N      L+++ +    A   +K  E   +  ++ P  + 
Sbjct: 279 ENKGEEIIRELEELAKEEPDNP---TVLSILGMAYESAQRYKKAEEIYLKVLKLEPENSE 335

Query: 270 ALNYLANHFFFTGQHFLVEQLTETALAVTNH----GPTKSHSYYNLARSYHSKGDYEKAG 325
            L  LA  +  TGQ+       E AL V N      P        +A   + +G+ + A 
Sbjct: 336 ILERLAEVYTRTGQY-------EKALDVLNRLYSLDPRDYRVLLIMADIENKRGNLD-AA 387

Query: 326 LYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGH- 384
           L Y+   K IN     I  Y+  G    KL  +  A   F+K LE+ PD  + L   G+ 
Sbjct: 388 LSYIQEAKSINDKDPTI--YFFEGIYYEKLDQWDKAEEAFKKALELRPDFPDALNYYGYS 445

Query: 385 IYVQLGQIEKAQELLRKAAKIDPRDAQAFID-LGELLISSDTGAALDAFKTARTLLKKAG 443
           + ++   I++A +++RKA ++ P D+ A++D LG        G  L A K  +   +KA 
Sbjct: 446 LIIRNRDIDRAMDMIRKALELVP-DSAAYLDSLGWGYFKK--GEYLKALKYIKQAYQKAP 502

Query: 444 EEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
           ++ P+ V  ++  +    G  E A + ++ AL
Sbjct: 503 DD-PV-VTEHLAEVEEALGNKEEALKLYRKAL 532



 Score = 48.5 bits (114), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 88/390 (22%), Positives = 158/390 (40%), Gaps = 73/390 (18%)

Query: 105 EKEEHFILATQYYNKASRIDMHE----------PSTWVGKGQLL---LAKGEVEQASSA- 150
           +K E +  AT+ Y     +D  E          P       QL+   L K + E+A    
Sbjct: 94  DKPETYSFATKIYKNLGNLDKAEEVALKGIERFPDNEAILSQLVDVYLKKNDAEKAKEVL 153

Query: 151 FKIV-LEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYK 209
           FKI  +   +  V   L +  + F   +  ++++  K+AL++ P    A  L +G    +
Sbjct: 154 FKIAKISPKKPRVYYTLARIYL-FQNNK-EEAIKHLKKALEIEPLYQPAYVL-LGELYLQ 210

Query: 210 LGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAM 269
             +  +A + + + L+ DP ++EAL  L  + +QA++    +K  E + R  +I P    
Sbjct: 211 DRKFKEAEKVYLKVLEKDPNDLEALNRLFQVYVQADQ---FKKAEEIINRIVKIDPSNKD 267

Query: 270 ALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYM 329
           AL      F    +    E++      +    P        L  +Y S   Y+KA   Y+
Sbjct: 268 AL---LKKFLLYLRENKGEEIIRELEELAKEEPDNPTVLSILGMAYESAQRYKKAEEIYL 324

Query: 330 ASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQL 389
                                                KVL++ P+N E L+ L  +Y + 
Sbjct: 325 -------------------------------------KVLKLEPENSEILERLAEVYTRT 347

Query: 390 GQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTG---AALDAFKTARTLLKKAGEEV 446
           GQ EKA ++L +   +DPRD +  + + +  I +  G   AAL   + A+++  K     
Sbjct: 348 GQYEKALDVLNRLYSLDPRDYRVLLIMAD--IENKRGNLDAALSYIQEAKSINDKDP--- 402

Query: 447 PIEVLNNIGVIHFEK-GEFESAHQSFKDAL 475
               +     I++EK  +++ A ++FK AL
Sbjct: 403 ---TIYFFEGIYYEKLDQWDKAEEAFKKAL 429


>gi|118391306|ref|XP_001028412.1| TPR Domain containing protein [Tetrahymena thermophila]
 gi|89281566|gb|EAR80749.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
          Length = 318

 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 70/299 (23%), Positives = 136/299 (45%), Gaps = 36/299 (12%)

Query: 178 YSDSLEFYKRALQVHPSCPGAI-RLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVA 236
           Y D++ F+++A+Q+ P    A   LG    + K+     A    Q+A+QLDP++  A   
Sbjct: 36  YDDAITFFQKAVQLDPRDSWAFGNLGYSFMKKKM--YDDAITFLQKAVQLDPKDSWAFGN 93

Query: 237 LAVMDLQANEAAGIRK----GMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTE 292
           L         +  I+K     +   Q+A ++ P  + A   +       G  F+ +++ +
Sbjct: 94  LGY-------SFMIKKMYDDAITFFQKAVQLDPKDSCAFRCM-------GYSFMKKEMYD 139

Query: 293 TALAVTNHG----PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGL 348
            A+          P  S ++ NL  S+  K  Y+ A  ++  +V +++    + F   G 
Sbjct: 140 DAITFFQKAVQLDPRDSWAFGNLGYSFMKKKMYDDAITFFQKAV-QLDPKDSWAFGNLGY 198

Query: 349 GQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPR 408
             ++ K+ D   A+T F+K +++ P +      LG+ ++Q    + A    +KA ++DP+
Sbjct: 199 SFMKKKMYD--DAITFFQKAVQLDPKDSWAFGKLGYSFMQKQMYDDAITFFQKAVQLDPK 256

Query: 409 DAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPI--EVLNNIGVIHFEKGEFE 465
           D+ AF  LG   +  +       +  A T  +KA +  P   E L N+G+   +KG ++
Sbjct: 257 DSWAFGKLGYSFMQKEM------YDDAITFSQKAVQLDPDVKENLLNLGIAFQKKGRYQ 309



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 57/262 (21%), Positives = 115/262 (43%), Gaps = 25/262 (9%)

Query: 220 FQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFF 279
           FQ+A+QLDP++  A   L    +Q          +   Q+A ++ P  + A   L     
Sbjct: 9   FQKAVQLDPKDSWAFGNLGYSFMQKEM---YDDAITFFQKAVQLDPRDSWAFGNL----- 60

Query: 280 FTGQHFLVEQLTETALAVTNHG----PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEI 335
             G  F+ +++ + A+          P  S ++ NL  S+  K  Y+ A  ++  +V ++
Sbjct: 61  --GYSFMKKKMYDDAITFLQKAVQLDPKDSWAFGNLGYSFMIKKMYDDAITFFQKAV-QL 117

Query: 336 NKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKA 395
           +      F   G   ++ ++ D   A+T F+K +++ P +      LG+ +++    + A
Sbjct: 118 DPKDSCAFRCMGYSFMKKEMYD--DAITFFQKAVQLDPRDSWAFGNLGYSFMKKKMYDDA 175

Query: 396 QELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIE--VLNN 453
               +KA ++DP+D+ AF +LG   +          +  A T  +KA +  P +      
Sbjct: 176 ITFFQKAVQLDPKDSWAFGNLGYSFMKKKM------YDDAITFFQKAVQLDPKDSWAFGK 229

Query: 454 IGVIHFEKGEFESAHQSFKDAL 475
           +G    +K  ++ A   F+ A+
Sbjct: 230 LGYSFMQKQMYDDAITFFQKAV 251



 Score = 46.2 bits (108), Expect = 0.096,   Method: Compositional matrix adjust.
 Identities = 31/120 (25%), Positives = 57/120 (47%), Gaps = 8/120 (6%)

Query: 358 FRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 417
           +  A+T F+K +++ P +      LG+ ++Q    + A    +KA ++DPRD+ AF +LG
Sbjct: 2   YDDAITFFQKAVQLDPKDSWAFGNLGYSFMQKEMYDDAITFFQKAVQLDPRDSWAFGNLG 61

Query: 418 ELLISSDTGAALDAFKTARTLLKKAGEEVPIE--VLNNIGVIHFEKGEFESAHQSFKDAL 475
              +          +  A T L+KA +  P +     N+G     K  ++ A   F+ A+
Sbjct: 62  YSFMKKKM------YDDAITFLQKAVQLDPKDSWAFGNLGYSFMIKKMYDDAITFFQKAV 115


>gi|209527528|ref|ZP_03276030.1| TPR repeat-containing protein [Arthrospira maxima CS-328]
 gi|209492016|gb|EDZ92369.1| TPR repeat-containing protein [Arthrospira maxima CS-328]
          Length = 530

 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 85/341 (24%), Positives = 149/341 (43%), Gaps = 47/341 (13%)

Query: 117 YNKASRIDMHEPSTWV--GKGQLLLAKGEVEQASSAFKIVLEADR------DNVPALLGQ 168
           YN+A  I     S W     G+ L  +G++++A +A++   E +       DN+  LL Q
Sbjct: 25  YNQA--IAASPKSAWYYHNLGEALSQQGKIDEAIAAYRQATELNPNSAWSYDNLGTLLNQ 82

Query: 169 ACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDP 228
                 +G   +++  +++A+++ P         + L   K G   +A    Q+A++L  
Sbjct: 83  ------QGNLPEAVRCFRQAIELDPYF-WQFYHNLALVLIKQGHPEEAVSLLQKAIELTA 135

Query: 229 ENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY---CAMALNYLANHFFFTGQHF 285
           ++ E   +L     Q  + +   + +   ++  E+ PY   C M+L          GQ  
Sbjct: 136 DDAELYHSLGKAYHQQQQYS---EAVTAYRQGLELNPYWSDCYMSL----------GQ-- 180

Query: 286 LVEQLTETALAVTNH------GPTKSHSYYNLARSYHSKGDYEK-AGLYYMASVKEINKP 338
            +E L ET  A+ ++       P  S +   L     S+G +E+ A LY    + + N  
Sbjct: 181 TLEALGETEEAIASYRRAYELNPNLSEALPKLQTVLESQGRWEELATLYRRCCIVDPNSA 240

Query: 339 HEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQEL 398
               +    LG      G    A  +++K LE+ P+  E L+ LG +  QL Q E A ++
Sbjct: 241 TSHKY----LGTALANSGKLSEAAESYQKALELDPNLVEILQPLGQVLTQLNQWEAAVDI 296

Query: 399 LRKAAKIDPRDAQAFIDLGELLISSD-TGAALDAFKTARTL 438
            RKA ++DP  A  +  LG+ L   D    AL A++ A  L
Sbjct: 297 FRKATQVDPNSASFYHQLGQALTKCDRLSEALAAYQKASEL 337



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 80/361 (22%), Positives = 159/361 (44%), Gaps = 20/361 (5%)

Query: 61  QILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKA 120
           Q+L +G   ++DE  A    + IA       YY  LG+  ++Q + +E    A   Y +A
Sbjct: 11  QLLRKG---QLDEAIASYN-QAIAASPKSAWYYHNLGEALSQQGKIDE----AIAAYRQA 62

Query: 121 SRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSD 180
           + ++ +   ++   G LL  +G + +A   F+  +E D          A V   +G   +
Sbjct: 63  TELNPNSAWSYDNLGTLLNQQGNLPEAVRCFRQAIELDPYFWQFYHNLALVLIKQGHPEE 122

Query: 181 SLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVM 240
           ++   ++A+++  +    +   +G   ++  Q  +A  A+++ L+L+P   +  ++L   
Sbjct: 123 AVSLLQKAIEL-TADDAELYHSLGKAYHQQQQYSEAVTAYRQGLELNPYWSDCYMSLG-- 179

Query: 241 DLQANEAAG-IRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTN 299
             Q  EA G   + +   +RA+E+ P  + AL  L       G+   +  L      V  
Sbjct: 180 --QTLEALGETEEAIASYRRAYELNPNLSEALPKLQTVLESQGRWEELATLYRRCCIVDP 237

Query: 300 HGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFR 359
           +  T SH Y  L  +  + G   +A   Y  +++      E + P   LGQV  +L  + 
Sbjct: 238 NSAT-SHKY--LGTALANSGKLSEAAESYQKALELDPNLVEILQP---LGQVLTQLNQWE 291

Query: 360 SALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGEL 419
           +A+  F K  ++ P++      LG    +  ++ +A    +KA+++ P       DLG++
Sbjct: 292 AAVDIFRKATQVDPNSASFYHQLGQALTKCDRLSEALAAYQKASELHPTSTPVLFDLGQV 351

Query: 420 L 420
           L
Sbjct: 352 L 352



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 83/363 (22%), Positives = 147/363 (40%), Gaps = 47/363 (12%)

Query: 93  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 152
           Y  LGK   +Q++  E    A   Y +   ++ +    ++  GQ L A GE E+A ++++
Sbjct: 141 YHSLGKAYHQQQQYSE----AVTAYRQGLELNPYWSDCYMSLGQTLEALGETEEAIASYR 196

Query: 153 IVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIR-LGIGLCRYKLG 211
              E + +   AL     V  ++GR+ +    Y+R   V P+   + + LG  L     G
Sbjct: 197 RAYELNPNLSEALPKLQTVLESQGRWEELATLYRRCCIVDPNSATSHKYLGTALANS--G 254

Query: 212 QLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMAL 271
           +L +A +++Q+AL+LDP  VE L  L  +  Q N+       ++  ++A ++ P  A   
Sbjct: 255 KLSEAAESYQKALELDPNLVEILQPLGQVLTQLNQ---WEAAVDIFRKATQVDPNSASFY 311

Query: 272 NYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLA----RSYH---SKGDYEKA 324
           + L      T    L E L     A   H PT +   ++L     + YH   +   Y+KA
Sbjct: 312 HQLGQ--ALTKCDRLSEALAAYQKASELH-PTSTPVLFDLGQVLTKLYHWSEAIATYQKA 368

Query: 325 GLYYMASVKEI---------------------NKPHEFIFP-----YYGLGQVQLKLGDF 358
                 +  EI                     ++ HEF  P     Y    Q     G  
Sbjct: 369 LYLNPPNQAEIQTHLQEVQDKQRHLDEEIAAYSESHEF-HPNSSESYEKFAQFLRSKGKI 427

Query: 359 RSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGE 418
             A+  F +   + P +      LG+   +  + ++A    +KA +++P        LG+
Sbjct: 428 EDAIIGFHQACILNPQSAVAHHQLGYTLARGQRWDEAIIAYQKAGELNPYSPHVQYHLGQ 487

Query: 419 LLI 421
            L+
Sbjct: 488 ALV 490


>gi|302821262|ref|XP_002992295.1| peptide N-acetylglucosaminyltransferase [Selaginella
           moellendorffii]
 gi|300139945|gb|EFJ06676.1| peptide N-acetylglucosaminyltransferase [Selaginella
           moellendorffii]
          Length = 933

 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 97/384 (25%), Positives = 161/384 (41%), Gaps = 54/384 (14%)

Query: 136 QLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSC 195
           ++LL++ +   A   +K VLEA+   V AL+ +      +G    +LE +  AL++ PS 
Sbjct: 93  EILLSRSKFADAQLLYKSVLEAEPSCVQALVSKGVCLQMQGNARQALECFASALKLDPSN 152

Query: 196 PGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVM--DLQAN--EAAGIR 251
             A+    G+   + G L +A +A+Q+ALQ DP+   AL +LAV+  D+  +   +  + 
Sbjct: 153 ARALT-QCGILYKEEGHLLEASEAYQKALQADPKYKPALESLAVVLTDIGTSLKLSGNVH 211

Query: 252 KGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNL 311
            GM+K   A       A A   L   +    Q+       E A A   H P  + +Y N+
Sbjct: 212 DGMQKYFEALRADATYAPAFYNLGVVYSEMLQYDTALNCYEKAAA---HRPMYAEAYCNM 268

Query: 312 ARSYHSKGDYEKAGLYY----------------MA--------SVKEINKPHEFIFPY-- 345
              Y ++GD + A   Y                MA         VK     H+ +  Y  
Sbjct: 269 GVIYKNRGDLDAAIACYERCLAVSPNFEIAKNNMAIALTDLGTKVKLEGNIHQGVAYYKK 328

Query: 346 ------------YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIE 393
                       Y LG    ++  F  A+  +E  L   P   E    LG IY     ++
Sbjct: 329 ALLYNWHYADAMYNLGVAYGEMLKFDMAVVMYELALHFNPQCAEACNNLGVIYKDRDNLD 388

Query: 394 KAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP--IEVL 451
           +A E  + A  I P  +Q+  +LG  ++ +  G       +A  +++KA    P   E  
Sbjct: 389 RAVECYQMALTIKPDFSQSLNNLG--VVYTVQG----KMDSASAMIEKAILANPSYAEAY 442

Query: 452 NNIGVIHFEKGEFESAHQSFKDAL 475
           NN+GV+H + G    A ++++  L
Sbjct: 443 NNLGVLHRDAGNIYLAIEAYERCL 466



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 66/294 (22%), Positives = 113/294 (38%), Gaps = 63/294 (21%)

Query: 356 GDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFID 415
           G+ R AL  F   L++ P N   L   G +Y + G + +A E  +KA + DP+   A   
Sbjct: 133 GNARQALECFASALKLDPSNARALTQCGILYKEEGHLLEASEAYQKALQADPKYKPALES 192

Query: 416 LGELLISSDTGAAL-------------------DA------------------FKTARTL 438
           L  +L  +D G +L                   DA                  + TA   
Sbjct: 193 LAVVL--TDIGTSLKLSGNVHDGMQKYFEALRADATYAPAFYNLGVVYSEMLQYDTALNC 250

Query: 439 LKKAGEEVPI--EVLNNIGVIHFEKGEFESAHQSFKDALG---------DGIWLTLLDSK 487
            +KA    P+  E   N+GVI+  +G+ ++A   ++  L          + + + L D  
Sbjct: 251 YEKAAAHRPMYAEAYCNMGVIYKNRGDLDAAIACYERCLAVSPNFEIAKNNMAIALTDLG 310

Query: 488 TKTYV-IDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASV 546
           TK  +  +    +  +K   L++            W+    ++NL     ++     A V
Sbjct: 311 TKVKLEGNIHQGVAYYKKALLYN------------WHYADAMYNLGVAYGEMLKFDMAVV 358

Query: 547 LYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLG 600
           +Y L L       +A   L  I K R+NL  ++E    AL +   +  +L+ LG
Sbjct: 359 MYELALHFNPQCAEACNNLGVIYKDRDNLDRAVECYQMALTIKPDFSQSLNNLG 412


>gi|15678100|ref|NP_275215.1| O-linked GlcNAc transferase [Methanothermobacter thermautotrophicus
           str. Delta H]
 gi|2621106|gb|AAB84576.1| O-linked GlcNAc transferase [Methanothermobacter thermautotrophicus
           str. Delta H]
          Length = 403

 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 80/304 (26%), Positives = 134/304 (44%), Gaps = 28/304 (9%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
           A + Y +A +ID  +  TW  KG LL   G+ E+A   ++  LE ++ N  A   +    
Sbjct: 103 ALECYERALQIDPQDDGTWNNKGALLDTIGKPEKAIECYEKALEINQKNAKAWYNKGNGL 162

Query: 173 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 232
            + G+Y ++LE Y++ALQ++     A      L   +L +  +A + + RALQ+DP++  
Sbjct: 163 RSLGKYEEALECYEKALQINAEFVEAW-YNKALIFEELKRYDEALECYGRALQIDPQD-- 219

Query: 233 ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLT- 291
                   D   N    +   + K ++A E Y   A+ +N   N   +  +  ++E+L  
Sbjct: 220 --------DGTWNNKGALLDTIGKPEKAIECYEK-ALEINQ-KNAKAWNNKGVVLEELKR 269

Query: 292 --------ETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIF 343
                   E AL +         ++ N        G YE+A L       EIN   EF  
Sbjct: 270 YDEALECYEKALEINLEN---DETWANKGVLLRKLGKYEEA-LECFEKALEIN--PEFAD 323

Query: 344 PYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAA 403
            +   G +   L     AL  +EK L++ P +       G    +LG+ +KA++  +KA 
Sbjct: 324 AWEWKGIILEDLKKPEEALKCYEKALKLNPQDKTLWYMQGKTLQKLGKHQKAKKSYKKAL 383

Query: 404 KIDP 407
           KIDP
Sbjct: 384 KIDP 387


>gi|376005011|ref|ZP_09782581.1| conserved hypothetical protein [Arthrospira sp. PCC 8005]
 gi|375326605|emb|CCE18334.1| conserved hypothetical protein [Arthrospira sp. PCC 8005]
          Length = 530

 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 85/341 (24%), Positives = 148/341 (43%), Gaps = 47/341 (13%)

Query: 117 YNKASRIDMHEPSTWV--GKGQLLLAKGEVEQASSAFKIVLEADR------DNVPALLGQ 168
           YN+A  I     S W     G+ L  +G++++A +A++   E +       DN+  LL Q
Sbjct: 25  YNQA--IAASPKSAWYYHNLGEALSQQGKIDEAIAAYRQATELNPNSAWSYDNLGTLLNQ 82

Query: 169 ACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDP 228
                 +G   +++  +++A+++ P         + L   K G   +A    Q+A++L  
Sbjct: 83  ------QGNLPEAVRCFRQAIELDPYF-WQFYHNLALVLIKQGHPEEAVSLLQKAIELTA 135

Query: 229 ENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY---CAMALNYLANHFFFTGQHF 285
           ++ E   +L     Q  +     + +   ++  E+ PY   C M+L          GQ  
Sbjct: 136 DDAELYHSLGKAYHQQQQ---YSEAVTAYRQGLELNPYWSDCYMSL----------GQ-- 180

Query: 286 LVEQLTETALAVTNH------GPTKSHSYYNLARSYHSKGDYEK-AGLYYMASVKEINKP 338
            +E L ET  A+ ++       P  S +   L     S+G +E+ A LY    + + N  
Sbjct: 181 TLEALGETEEAIASYRRAYELNPNLSEALPKLQTVLESQGRWEELATLYRRCCIVDPNSA 240

Query: 339 HEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQEL 398
               +    LG      G    A  +++K LE+ P+  E L+ LG +  QL Q E A ++
Sbjct: 241 TSHKY----LGTALANSGKLSEAAESYQKALELDPNLVEILQPLGQVLTQLNQWEAAVDI 296

Query: 399 LRKAAKIDPRDAQAFIDLGELLISSD-TGAALDAFKTARTL 438
            RKA ++DP  A  +  LG+ L   D    AL A++ A  L
Sbjct: 297 FRKATQVDPNSASFYHQLGQALTKCDRLSEALAAYQKASEL 337



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 80/361 (22%), Positives = 158/361 (43%), Gaps = 20/361 (5%)

Query: 61  QILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKA 120
           Q+L +G   ++DE  A    + IA       YY  LG+  ++Q + +E    A   Y +A
Sbjct: 11  QLLRKG---QLDEAIASYN-QAIAASPKSAWYYHNLGEALSQQGKIDE----AIAAYRQA 62

Query: 121 SRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSD 180
           + ++ +   ++   G LL  +G + +A   F+  +E D          A V   +G   +
Sbjct: 63  TELNPNSAWSYDNLGTLLNQQGNLPEAVRCFRQAIELDPYFWQFYHNLALVLIKQGHPEE 122

Query: 181 SLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVM 240
           ++   ++A+++  +    +   +G   ++  Q  +A  A+++ L+L+P   +  ++L   
Sbjct: 123 AVSLLQKAIEL-TADDAELYHSLGKAYHQQQQYSEAVTAYRQGLELNPYWSDCYMSLG-- 179

Query: 241 DLQANEAAG-IRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTN 299
             Q  EA G   + +   +RA+E+ P  + AL  L       G+   +  L      V  
Sbjct: 180 --QTLEALGETEEAIASYRRAYELNPNLSEALPKLQTVLESQGRWEELATLYRRCCIVDP 237

Query: 300 HGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFR 359
           +  T SH Y  L  +  + G   +A   Y  +++      E + P   LGQV  +L  + 
Sbjct: 238 NSAT-SHKY--LGTALANSGKLSEAAESYQKALELDPNLVEILQP---LGQVLTQLNQWE 291

Query: 360 SALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGEL 419
           +A+  F K  ++ P++      LG    +  ++ +A    +KA+++ P       DLG+ 
Sbjct: 292 AAVDIFRKATQVDPNSASFYHQLGQALTKCDRLSEALAAYQKASELHPTSTPVLFDLGQA 351

Query: 420 L 420
           L
Sbjct: 352 L 352



 Score = 53.1 bits (126), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 84/362 (23%), Positives = 147/362 (40%), Gaps = 47/362 (12%)

Query: 93  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 152
           Y  LGK   +Q++  E    A   Y +   ++ +    ++  GQ L A GE E+A ++++
Sbjct: 141 YHSLGKAYHQQQQYSE----AVTAYRQGLELNPYWSDCYMSLGQTLEALGETEEAIASYR 196

Query: 153 IVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIR-LGIGLCRYKLG 211
              E + +   AL     V  ++GR+ +    Y+R   V P+   + + LG  L     G
Sbjct: 197 RAYELNPNLSEALPKLQTVLESQGRWEELATLYRRCCIVDPNSATSHKYLGTALANS--G 254

Query: 212 QLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMAL 271
           +L +A +++Q+AL+LDP  VE L  L  +  Q N+       ++  ++A ++ P  A   
Sbjct: 255 KLSEAAESYQKALELDPNLVEILQPLGQVLTQLNQ---WEAAVDIFRKATQVDPNSASFY 311

Query: 272 NYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARS----YH---SKGDYEKA 324
           + L      T    L E L     A   H PT +   ++L ++    YH   +   Y+KA
Sbjct: 312 HQLGQ--ALTKCDRLSEALAAYQKASELH-PTSTPVLFDLGQALTKLYHWSEAIATYQKA 368

Query: 325 GLYYMASVKEI---------------------NKPHEFIFP-----YYGLGQVQLKLGDF 358
                 +  EI                     ++ HEF  P     Y    Q     G  
Sbjct: 369 LYLNPPNQAEIQTHLQEVQDKQRHLDEEIAAYSESHEF-HPNSSESYEKFAQFLRSKGKI 427

Query: 359 RSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGE 418
             A+  F +   + P +      LG+   +  + ++A    RKA +++P        LG+
Sbjct: 428 EDAIIGFHQACILNPQSAVAHHQLGYTLARGQRWDEAIIAYRKAGELNPHSPHVQYHLGQ 487

Query: 419 LL 420
            L
Sbjct: 488 AL 489


>gi|425459650|ref|ZP_18839136.1| Serine/threonine protein kinase [Microcystis aeruginosa PCC 9808]
 gi|389822559|emb|CCI29802.1| Serine/threonine protein kinase [Microcystis aeruginosa PCC 9808]
          Length = 736

 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 88/351 (25%), Positives = 158/351 (45%), Gaps = 31/351 (8%)

Query: 134 KGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHP 193
           +GQ          A +++   L+ + D + AL G+A       RYS++L  Y++A+Q++P
Sbjct: 367 QGQTFYQLKRYTDALNSYGQALKINPDYLEALQGKADALLALKRYSEALNTYEKAIQINP 426

Query: 194 SCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKG 253
                  LG G    KLG+  +A ++F+R L L+P   +A    A + L+  + +  +K 
Sbjct: 427 DSAWQAWLGRGEALDKLGKNQEALESFERVLSLNPAASQAWQGKADIYLELQQYSAAQKA 486

Query: 254 MEKM----QRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGP----TKS 305
           +EK+    Q   +I+     +L  L +   + G     +Q    ALA+ +        K 
Sbjct: 487 LEKLLTFQQNDAKIWYKKGWSLQNLED---YEGAVKAYDQ----ALAIESDNALIWYQKG 539

Query: 306 HSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNF 365
           +S Y L +  ++   Y KAG +          P +F   YY  G +  KLG    AL  F
Sbjct: 540 NSLYQLNKINNALESYSKAGQF---------NP-QFSQAYYSQGIILQKLGRNSEALEAF 589

Query: 366 EKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SD 424
            +  +   +  +     G +  QL + ++A     KA +I  R ++ FI +G       D
Sbjct: 590 TQATKANSNYYQAWLNQGALLHQLERFQEAIASYEKARRISSRKSEVFIGIGNACYRLGD 649

Query: 425 TGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
              A+ A++ A    K    + P E   ++G   F+ G++E A Q+++++L
Sbjct: 650 YSQAITAYQQAIQRQK----DNP-ETWKSLGNSWFKLGQYERAIQAYQESL 695



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 72/302 (23%), Positives = 128/302 (42%), Gaps = 41/302 (13%)

Query: 117 YNKASRIDMHEP-STWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNR 175
           Y KA +I+       W+G+G+ L   G+ ++A  +F+ VL  +     A  G+A +    
Sbjct: 418 YEKAIQINPDSAWQAWLGRGEALDKLGKNQEALESFERVLSLNPAASQAWQGKADIYLEL 477

Query: 176 GRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV 235
            +YS + +  ++ L    +    I    G     L     A +A+ +AL ++ +N     
Sbjct: 478 QQYSAAQKALEKLLTFQQN-DAKIWYKKGWSLQNLEDYEGAVKAYDQALAIESDNALIWY 536

Query: 236 ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQL---TE 292
                  Q N+   I   +E   +A +  P  + A         +  Q  ++++L   +E
Sbjct: 537 QKGNSLYQLNK---INNALESYSKAGQFNPQFSQA---------YYSQGIILQKLGRNSE 584

Query: 293 TALAVTNHGPTKSHSY----------YNLARSYHSKGDYEKAGLYYMASVKEINKPHEFI 342
              A T      S+ Y          + L R   +   YEKA        + I+     +
Sbjct: 585 ALEAFTQATKANSNYYQAWLNQGALLHQLERFQEAIASYEKA--------RRISSRKSEV 636

Query: 343 FPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKA----QEL 398
           F   G+G    +LGD+  A+T +++ ++   DN ET K+LG+ + +LGQ E+A    QE 
Sbjct: 637 F--IGIGNACYRLGDYSQAITAYQQAIQRQKDNPETWKSLGNSWFKLGQYERAIQAYQES 694

Query: 399 LR 400
           LR
Sbjct: 695 LR 696


>gi|113475342|ref|YP_721403.1| hypothetical protein Tery_1657, partial [Trichodesmium erythraeum
           IMS101]
 gi|110166390|gb|ABG50930.1| TPR repeat [Trichodesmium erythraeum IMS101]
          Length = 594

 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 82/337 (24%), Positives = 152/337 (45%), Gaps = 40/337 (11%)

Query: 164 ALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRA 223
           A + +A V+F    Y  ++  Y R L+++P+ P A     G C  +LG+  +A+  +   
Sbjct: 147 AYVQRADVDFRLNNYQQAISIYDRGLRLNPNLPLAY-YDQGRCFLQLGKKKQAQDCWHEG 205

Query: 224 LQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEI-------YPYCAMALNYLAN 276
           L++ P+  +       +  Q  E +   K +E+ Q A  +       Y + AMA + L N
Sbjct: 206 LKIIPKTSDDYNTRGAILSQLEEHS---KALEEFQEALRLNNNNIGAYVHRAMAHSALGN 262

Query: 277 HFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG-DYEKAGLYYMASVKEI 335
           H         V    + AL++ +          N A  Y  +G  +E+ G    A ++E 
Sbjct: 263 HQ-------AVMDNFDKALSLNS----------NDADIYGWRGIHFEQTGELKKA-IEEF 304

Query: 336 NKP----HEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQ 391
           +K     +++   Y   G+    LG+ + A+ +F + LEI P+N     ALG  Y+ L  
Sbjct: 305 DKALQINYKYTVVYAERGKCYSWLGNQQEAIKDFNRALEIAPNNSYAYDALGTAYLYLND 364

Query: 392 IEKAQELLRKAAKIDPRDAQAFIDLGELL-ISSDTGAALDAFKTARTLLKKAGEEVPIEV 450
           IE+A++  +KA K++P +  A   +G +         A+ A++ A  +  K  +      
Sbjct: 365 IEEAEQKFKKALKLNPNNPLAHCGIGVVFGFKEKWEEAIAAYQEALCIEPKLAQGY---- 420

Query: 451 LNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSK 487
            + +G   F +G+ + A  ++K ALG     T++ +K
Sbjct: 421 -DGLGQAFFMQGKLDEAIHAYKKALGIAPNFTIVHNK 456



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 79/350 (22%), Positives = 148/350 (42%), Gaps = 16/350 (4%)

Query: 134 KGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHP 193
           +G +L    E  +A   F+  L  + +N+ A + +A      G +   ++ + +AL ++ 
Sbjct: 219 RGAILSQLEEHSKALEEFQEALRLNNNNIGAYVHRAMAHSALGNHQAVMDNFDKALSLN- 277

Query: 194 SCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKG 253
           S    I    G+   + G+L KA + F +ALQ+   N +  V  A      +     ++ 
Sbjct: 278 SNDADIYGWRGIHFEQTGELKKAIEEFDKALQI---NYKYTVVYAERGKCYSWLGNQQEA 334

Query: 254 MEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLAR 313
           ++   RA EI P  + A + L   + +       EQ  + AL +  + P    ++  +  
Sbjct: 335 IKDFNRALEIAPNNSYAYDALGTAYLYLNDIEEAEQKFKKALKLNPNNPL---AHCGIGV 391

Query: 314 SYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYP 373
            +  K  +E+A   Y  ++    +P +    Y GLGQ     G    A+  ++K L I P
Sbjct: 392 VFGFKEKWEEAIAAYQEAL--CIEP-KLAQGYDGLGQAFFMQGKLDEAIHAYKKALGIAP 448

Query: 374 DNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSD-TGAALDAF 432
           +       LG    Q  + ++A    ++A  +DP  A A  +LG  L+  D T   +   
Sbjct: 449 NFTIVHNKLGVALEQQKKEDEAVAAYKEAISLDPNFATARANLGYALLKQDRTTDGIANL 508

Query: 433 KTARTLLKKAGEEVPIEVLNNI-----GVIHFEKGEFESAHQSFKDALGD 477
           K AR L +   ++     ++N         H+ KGE  S    +++A+ +
Sbjct: 509 KKARDLFQTQNQDKEASKIDNFLCKRESESHYRKGEKLSKQGKYQEAIAE 558


>gi|355572129|ref|ZP_09043311.1| Tetratricopeptide TPR_2 repeat-containing protein [Methanolinea
           tarda NOBI-1]
 gi|354824845|gb|EHF09084.1| Tetratricopeptide TPR_2 repeat-containing protein [Methanolinea
           tarda NOBI-1]
          Length = 660

 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 97/391 (24%), Positives = 168/391 (42%), Gaps = 52/391 (13%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
           A   Y++A  ID    S    K Q+L A G  E+A S    +L  +  N    + ++ + 
Sbjct: 215 ALSSYDQALGIDPDSTSVLSKKAQVLAALGRTEEALSTIDRILVLEPGNATYWVHKSFLL 274

Query: 173 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 232
            N GR+++SL+    A+ + P+   A     G     LG  G A  A+ +A+ +DP N  
Sbjct: 275 NNLGRFNESLDASGTAISLEPNNAVAWN-NRGFSYNSLGMFGDAVSAYSQAIAIDPGNPA 333

Query: 233 ALV--ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQL 290
           A      A+++L   E A     +  + RA  + P  A A +Y A   +  G+    E L
Sbjct: 334 AYTNRGFALLNLGKGEDA-----LGDLDRATTLQPDLATAWSYRALADYRLGR--FTEAL 386

Query: 291 TETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQ 350
            + + A T   P  S ++     +   KG+++KA  Y+  ++  +N     I+   G+  
Sbjct: 387 DDASRA-TRLNPRDSLAWSTGGMALLQKGEFQKAIPYFDKALT-LNPNASDIWLNKGIAL 444

Query: 351 VQLKLGDFRSALTNFEKVLEIYPDNCE-------TLKALGH----IYVQLGQIE----KA 395
              K  +   AL+  ++VLE+ P++          L+ALG     +++   Q++      
Sbjct: 445 YMAK--NNEEALSALDRVLELDPESMTAWQYKVYALRALGRGEEAVWITDRQLKTDSWNT 502

Query: 396 QELLRKAAKI-------------------DPRDAQAFIDLGELLISSDTGAALDAFKTAR 436
             LLRKA  +                   DP + +A +  G++ I+S  G  L A +T  
Sbjct: 503 TLLLRKATALVILNRMGEAQLALSRILEKDPSNYEALVARGKIQIAS--GDYLGAIRTFD 560

Query: 437 TLLKKAGEEVPIEVLNNIGVIHFEKGEFESA 467
            L K   +    E L  +GV ++  G++E A
Sbjct: 561 VLQKTMPDA--DESLIFLGVAYYRSGQYEKA 589



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 81/325 (24%), Positives = 138/325 (42%), Gaps = 18/325 (5%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
           A   Y++A  ID   P+ +  +G  LL  G+ E A            D   A   +A  +
Sbjct: 317 AVSAYSQAIAIDPGNPAAYTNRGFALLNLGKGEDALGDLDRATTLQPDLATAWSYRALAD 376

Query: 173 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 232
           +  GR++++L+   RA +++P    A   G G+   + G+  KA   F +AL L+P   +
Sbjct: 377 YRLGRFTEALDDASRATRLNPRDSLAWSTG-GMALLQKGEFQKAIPYFDKALTLNPNASD 435

Query: 233 ALV--ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQL 290
             +   +A+   + NE A     +  + R  E+ P    A  Y        G+       
Sbjct: 436 IWLNKGIALYMAKNNEEA-----LSALDRVLELDPESMTAWQYKVYALRALGRG------ 484

Query: 291 TETALAVTNHG-PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLG 349
            E A+ +T+    T S +   L R   +     + G   +A  + + K           G
Sbjct: 485 -EEAVWITDRQLKTDSWNTTLLLRKATALVILNRMGEAQLALSRILEKDPSNYEALVARG 543

Query: 350 QVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRD 409
           ++Q+  GD+  A+  F+ + +  PD  E+L  LG  Y + GQ EKA  +  K  K DP +
Sbjct: 544 KIQIASGDYLGAIRTFDVLQKTMPDADESLIFLGVAYYRSGQYEKALAVYDKLLKKDPAN 603

Query: 410 AQAFIDLGELLISSDTGAALDAFKT 434
           +  + + G  L+   TG   DA K+
Sbjct: 604 SLTWSNRGYALVK--TGRIQDAIKS 626



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 74/314 (23%), Positives = 129/314 (41%), Gaps = 20/314 (6%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPAL--LGQAC 170
           A Q Y++A  +D++  + W G G      G+  +A   F   L  +    PA   LG   
Sbjct: 113 AAQAYDRAIALDINITTAWNGIGTAYSRMGKYTEARQFFLAALRTNGSYAPAAKNLGDTL 172

Query: 171 VEFNRGRYSDSLEFYKRALQVHPS-CPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPE 229
           V      + ++L  Y +AL + P+    A+  G  L R+  G+ G+A  ++ +AL +DP+
Sbjct: 173 VALQL--WGEALRAYDQALAMDPALASAAVARGDLLSRF--GRNGEALSSYDQALGIDPD 228

Query: 230 NVEALVALAVMDLQANEAAG-IRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVE 288
           +   L   A    Q   A G   + +  + R   + P    A  ++   F         E
Sbjct: 229 STSVLSKKA----QVLAALGRTEEALSTIDRILVLEP--GNATYWVHKSFLLNNLGRFNE 282

Query: 289 QLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA-GLYYMASVKEINKPHEFIFPYYG 347
            L  +  A++   P  + ++ N   SY+S G +  A   Y  A   +   P      Y  
Sbjct: 283 SLDASGTAISLE-PNNAVAWNNRGFSYNSLGMFGDAVSAYSQAIAIDPGNPAA----YTN 337

Query: 348 LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 407
            G   L LG    AL + ++   + PD             +LG+  +A +   +A +++P
Sbjct: 338 RGFALLNLGKGEDALGDLDRATTLQPDLATAWSYRALADYRLGRFTEALDDASRATRLNP 397

Query: 408 RDAQAFIDLGELLI 421
           RD+ A+   G  L+
Sbjct: 398 RDSLAWSTGGMALL 411



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 61/269 (22%), Positives = 102/269 (37%), Gaps = 44/269 (16%)

Query: 109 HFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQ 168
            F  A  Y++KA  ++ +    W+ KG  L      E+A SA   VLE D +++ A   +
Sbjct: 415 EFQKAIPYFDKALTLNPNASDIWLNKGIALYMAKNNEEALSALDRVLELDPESMTAWQYK 474

Query: 169 ACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDP 228
                  GR  +++    R L+   S    + L        L ++G+A+ A  R L+ DP
Sbjct: 475 VYALRALGRGEEAVWITDRQLKTD-SWNTTLLLRKATALVILNRMGEAQLALSRILEKDP 533

Query: 229 ENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVE 288
            N EALVA   + + + +  G  +  + +Q+                             
Sbjct: 534 SNYEALVARGKIQIASGDYLGAIRTFDVLQKTM--------------------------- 566

Query: 289 QLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGL 348
                        P    S   L  +Y+  G YEKA   Y    K + K       +   
Sbjct: 567 -------------PDADESLIFLGVAYYRSGQYEKALAVY---DKLLKKDPANSLTWSNR 610

Query: 349 GQVQLKLGDFRSALTNFEKVLEIYPDNCE 377
           G   +K G  + A+ +F++ LE+ P N +
Sbjct: 611 GYALVKTGRIQDAIKSFDRALELDPKNMD 639



 Score = 45.4 bits (106), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 34/118 (28%), Positives = 60/118 (50%), Gaps = 8/118 (6%)

Query: 121 SRIDMHEPSTW---VGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGR 177
           SRI   +PS +   V +G++ +A G+   A   F ++ +   D   +L+      +  G+
Sbjct: 526 SRILEKDPSNYEALVARGKIQIASGDYLGAIRTFDVLQKTMPDADESLIFLGVAYYRSGQ 585

Query: 178 YSDSLEFYKRALQVHP--SCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEA 233
           Y  +L  Y + L+  P  S   + R   G    K G++  A ++F RAL+LDP+N++A
Sbjct: 586 YEKALAVYDKLLKKDPANSLTWSNR---GYALVKTGRIQDAIKSFDRALELDPKNMDA 640



 Score = 42.7 bits (99), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 31/128 (24%), Positives = 59/128 (46%), Gaps = 6/128 (4%)

Query: 349 GQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPR 408
           G   L+ G+   +L  F++ + I  +N E  +  G     +G+  +A E L ++  +DP 
Sbjct: 33  GDRLLEQGNLEQSLVLFDRAIAINGENVEAWEGRGKALHLMGRESEAFESLNRSLALDPS 92

Query: 409 DAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEV-LNNIGVIHFEKGEFESA 467
            A  ++ LG++L++ D       +  A+   +    ++ I    N IG  +   G++  A
Sbjct: 93  SASRWVALGDVLLAMDQN-----YDAAQAYDRAIALDINITTAWNGIGTAYSRMGKYTEA 147

Query: 468 HQSFKDAL 475
            Q F  AL
Sbjct: 148 RQFFLAAL 155


>gi|183222246|ref|YP_001840242.1| TPR repeat-containing signal peptide [Leptospira biflexa serovar
           Patoc strain 'Patoc 1 (Paris)']
 gi|189912298|ref|YP_001963853.1| TPR repeat-containing lipoprotein [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Ames)']
 gi|167776974|gb|ABZ95275.1| TPR-repeat-containing lipoprotein [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Ames)']
 gi|167780668|gb|ABZ98966.1| TPR-repeat-containing protein; putative signal peptide [Leptospira
           biflexa serovar Patoc strain 'Patoc 1 (Paris)']
          Length = 1197

 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 85/348 (24%), Positives = 148/348 (42%), Gaps = 40/348 (11%)

Query: 144 VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGI 203
           VE+++++ +  +E  R    AL+     EF +G    SLE  K ++Q      G   LG 
Sbjct: 32  VEKSAASDRQKIEEAR----ALIADGSNEFQKGNMDVSLEKAKSSIQTFELVEGYALLGA 87

Query: 204 GLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMD--LQANEAA-GIRKGMEKMQRA 260
               Y+LG    A+ A+++   LDP+N + L+ L  +   L  NEAA    + + K++  
Sbjct: 88  --SHYQLGDYENAKIAYEKGNNLDPQNEKILIGLGTVQSTLGENEAALSTYQTLNKLKPE 145

Query: 261 FEIYPY--------------CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSH 306
             IY Y                + L  L +   F     L+ QL +  L +         
Sbjct: 146 ESIYTYKTGILLKNLGRYQESLVTLKSLEDKQDFPYPVELLNQLGDVCLELKK------- 198

Query: 307 SYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFE 366
             Y  A SY +K +     L      K   K    I      G   L   ++  A   F+
Sbjct: 199 --YEEAESYFAKAEKLNPELKSAKDAKLSTKIASLI----QRGNDFLNKKNYTEATAEFK 252

Query: 367 KVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTG 426
           K  E+ P N      LG+  +  G++++++E  +K+  +   +A A++ L  +LI +   
Sbjct: 253 KASELQPQNGSVWSFLGNAQLLNGKLKESEESFKKSISLSDTNANAYVGLCNVLIQTHNY 312

Query: 427 AALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDA 474
           +  D  KT++  L+K  +    E+ N  G+  ++ GE + A  SF+D+
Sbjct: 313 S--DCLKTSKQALQKIPKNA--EIRNKQGICEWKWGEVKKATLSFQDS 356



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 101/430 (23%), Positives = 171/430 (39%), Gaps = 66/430 (15%)

Query: 107 EEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALL 166
           ++++  AT  + KAS +     S W   G   L  G+++++  +FK  +     N  A +
Sbjct: 241 KKNYTEATAEFKKASELQPQNGSVWSFLGNAQLLNGKLKESEESFKKSISLSDTNANAYV 300

Query: 167 GQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQL 226
           G   V      YSD L+  K+ALQ  P     IR   G+C +K G++ KA  +FQ +   
Sbjct: 301 GLCNVLIQTHNYSDCLKTSKQALQKIPKN-AEIRNKQGICEWKWGEVKKATLSFQDSSSW 359

Query: 227 DPENVEALVALAVMDLQA---NEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQ 283
           DP  +E  + LA + + +   +EA  + K  E   +A +     A  L   +  F  +G 
Sbjct: 360 DPNFMEPKMNLAYVLIDSGRYDEALDVLKKAETHPKAKKEDIRKAKILAE-SQKFIASGD 418

Query: 284 HFLVEQLTE-------TALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYM------- 329
            FL +   +        A+ V    P   ++Y    R+Y +  +Y+KA   Y+       
Sbjct: 419 SFLRQGKRKQAFDEYGKAMGVNPENPAVQNAY---GRAYFAFSEYKKAEGSYLEAYRLDN 475

Query: 330 -------------ASVKEINKPHEFI-----------FPYYGLGQVQLKLGDFRSALTNF 365
                        A   E  K  EFI           F    LG++      +  A + +
Sbjct: 476 TNPGALQGLARVYAKTGESKKEKEFIKKLETLSATDPFSAITLGRIAEDASKWDEAESIY 535

Query: 366 EKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDT 425
             + + +P+N      LG +Y +    E ++E   KA +   +  +   D+ EL+ +  T
Sbjct: 536 MGLKKKFPNNEAVDYRLGSLYYKRAVEENSKENYTKANEFIQKSKKYTKDIPELVETEKT 595

Query: 426 ----------------GAAL---DAFKTARTLLKKAGEEVP-IEVLNNIGVIHFEKGEFE 465
                           G AL     +  A T  +KA + VP   +L  I   + EKGE E
Sbjct: 596 VSENSRFAEILPFVKEGNALFNRKKYIEAVTPYQKAYDRVPKASLLVKIAECYIEKGEEE 655

Query: 466 SAHQSFKDAL 475
                 ++A+
Sbjct: 656 KGLSILENAV 665


>gi|423065536|ref|ZP_17054326.1| TPR containing protein [Arthrospira platensis C1]
 gi|406712979|gb|EKD08154.1| TPR containing protein [Arthrospira platensis C1]
          Length = 530

 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 85/341 (24%), Positives = 149/341 (43%), Gaps = 47/341 (13%)

Query: 117 YNKASRIDMHEPSTWV--GKGQLLLAKGEVEQASSAFKIVLEADR------DNVPALLGQ 168
           YN+A  I     S W     G+ L  +G++++A +A++   E +       DN+  LL Q
Sbjct: 25  YNQA--IAASPKSAWYYHNLGEALSQQGKIDEAIAAYRQATELNPNSAWSYDNLGTLLNQ 82

Query: 169 ACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDP 228
                 +G   +++  +++A+++ P         + L   K G   +A    Q+A++L  
Sbjct: 83  ------QGNLPEAVRCFRQAIELDPYF-WQFYHNLALVLIKQGHPEEAVSLLQKAIELTA 135

Query: 229 ENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY---CAMALNYLANHFFFTGQHF 285
           ++ E   +L     Q  + +   + +   ++  E+ PY   C M+L          GQ  
Sbjct: 136 DDAELYHSLGKAYHQQQQYS---EAVTAYRQGLELNPYWSDCYMSL----------GQ-- 180

Query: 286 LVEQLTETALAVTNH------GPTKSHSYYNLARSYHSKGDYEK-AGLYYMASVKEINKP 338
            +E L ET  A+ ++       P  S +   L     S+G +E+ A LY    + + N  
Sbjct: 181 TLEALGETEEAIASYRRAYELNPNLSEALPKLQTVLESQGRWEELATLYRRCCIVDPNSA 240

Query: 339 HEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQEL 398
               +    LG      G    A  +++K LE+ P+  E L+ LG +  QL Q E A ++
Sbjct: 241 TSHKY----LGTALANSGKLSEAAESYQKALELDPNLVEILQPLGQVLTQLNQWEAAVDI 296

Query: 399 LRKAAKIDPRDAQAFIDLGELLISSD-TGAALDAFKTARTL 438
            RKA ++DP  A  +  LG+ L   D    AL A++ A  L
Sbjct: 297 FRKATQVDPNSASFYHQLGQALTKCDRLSEALAAYQKASEL 337



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 80/361 (22%), Positives = 159/361 (44%), Gaps = 20/361 (5%)

Query: 61  QILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKA 120
           Q+L +G   ++DE  A    + IA       YY  LG+  ++Q + +E    A   Y +A
Sbjct: 11  QLLRKG---QLDEAIASYN-QAIAASPKSAWYYHNLGEALSQQGKIDE----AIAAYRQA 62

Query: 121 SRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSD 180
           + ++ +   ++   G LL  +G + +A   F+  +E D          A V   +G   +
Sbjct: 63  TELNPNSAWSYDNLGTLLNQQGNLPEAVRCFRQAIELDPYFWQFYHNLALVLIKQGHPEE 122

Query: 181 SLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVM 240
           ++   ++A+++  +    +   +G   ++  Q  +A  A+++ L+L+P   +  ++L   
Sbjct: 123 AVSLLQKAIEL-TADDAELYHSLGKAYHQQQQYSEAVTAYRQGLELNPYWSDCYMSLG-- 179

Query: 241 DLQANEAAG-IRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTN 299
             Q  EA G   + +   +RA+E+ P  + AL  L       G+   +  L      V  
Sbjct: 180 --QTLEALGETEEAIASYRRAYELNPNLSEALPKLQTVLESQGRWEELATLYRRCCIVDP 237

Query: 300 HGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFR 359
           +  T SH Y  L  +  + G   +A   Y  +++      E + P   LGQV  +L  + 
Sbjct: 238 NSAT-SHKY--LGTALANSGKLSEAAESYQKALELDPNLVEILQP---LGQVLTQLNQWE 291

Query: 360 SALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGEL 419
           +A+  F K  ++ P++      LG    +  ++ +A    +KA+++ P       DLG++
Sbjct: 292 AAVDIFRKATQVDPNSASFYHQLGQALTKCDRLSEALAAYQKASELHPTSTPVLFDLGQV 351

Query: 420 L 420
           L
Sbjct: 352 L 352



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 84/363 (23%), Positives = 148/363 (40%), Gaps = 47/363 (12%)

Query: 93  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 152
           Y  LGK   +Q++  E    A   Y +   ++ +    ++  GQ L A GE E+A ++++
Sbjct: 141 YHSLGKAYHQQQQYSE----AVTAYRQGLELNPYWSDCYMSLGQTLEALGETEEAIASYR 196

Query: 153 IVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIR-LGIGLCRYKLG 211
              E + +   AL     V  ++GR+ +    Y+R   V P+   + + LG  L     G
Sbjct: 197 RAYELNPNLSEALPKLQTVLESQGRWEELATLYRRCCIVDPNSATSHKYLGTALANS--G 254

Query: 212 QLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMAL 271
           +L +A +++Q+AL+LDP  VE L  L  +  Q N+       ++  ++A ++ P  A   
Sbjct: 255 KLSEAAESYQKALELDPNLVEILQPLGQVLTQLNQ---WEAAVDIFRKATQVDPNSASFY 311

Query: 272 NYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLA----RSYH---SKGDYEKA 324
           + L      T    L E L     A   H PT +   ++L     + YH   +   Y+KA
Sbjct: 312 HQLGQ--ALTKCDRLSEALAAYQKASELH-PTSTPVLFDLGQVLTKLYHWSEAIATYQKA 368

Query: 325 GLYYMASVKEI---------------------NKPHEFIFP-----YYGLGQVQLKLGDF 358
                 +  EI                     ++ HEF  P     Y   GQ     G  
Sbjct: 369 LYLNPPNQAEIQTHLQEVQDKQRHLDEEIAAYSESHEF-HPNSGESYETFGQFLRSKGKI 427

Query: 359 RSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGE 418
             A+  F +   + P +      LG+   +  + ++A    +KA +++P        LG+
Sbjct: 428 EDAIIGFHQACILNPQSAVAHHQLGYTLARGQRWDEAIIAYQKAGELNPYSPHVQYHLGQ 487

Query: 419 LLI 421
            L+
Sbjct: 488 ALV 490


>gi|118381790|ref|XP_001024055.1| TPR Domain containing protein [Tetrahymena thermophila]
 gi|89305822|gb|EAS03810.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
          Length = 376

 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 92/360 (25%), Positives = 164/360 (45%), Gaps = 24/360 (6%)

Query: 117 YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPAL--LGQACVEFN 174
           Y +A +ID  E       G +    G+VE A   ++ VL+ +  +  A   LG+ C   N
Sbjct: 9   YQQALQIDPLEQDLLYNLGTIFNTNGDVENAKKCYEKVLQINPLSYQAHNDLGKICQ--N 66

Query: 175 RGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEAL 234
           +    D+   Y++AL+++P    AI + +G   Y  G +  A+Q +++ALQLD +  +A 
Sbjct: 67  KKNIEDAKLHYEKALKINPQYCMAI-VNLGTVYYGQGMIEDAQQQYEKALQLDNKFYQAH 125

Query: 235 VALAVMDLQANEAAGIRKGMEK-MQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTET 293
             LA++          ++  E+ +Q   E YP    AL  L   +   G +   ++    
Sbjct: 126 FNLALLYDDKGMIEEAKQYYEQTLQANQEYYP----ALYNLGLIYQNEGHY---QEARRC 178

Query: 294 ALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQL 353
            L   +  P    +Y +L   Y S G  E A  Y   +++  NK    +  +  L  +  
Sbjct: 179 YLITLDINPQFYQAYISLGCIYFSLGMLEDAQNYCEKALQINNKS---LDAHLNLAFIYD 235

Query: 354 KLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAF 413
                  A  ++E+VL+I P   +    LG IY +   +E+A+    K+ +I+ +  QA+
Sbjct: 236 SKDMIEEARQSYEQVLQINPKLYQAQNNLGLIYRKKEMLEEAKVCYEKSIQINDQYYQAY 295

Query: 414 IDLGELLISSDTGAALDAFKTARTLLKKAGEEVPI--EVLNNIGVIHFEKGEFESAHQSF 471
            +L    I  D G      + A+  L+KA +  P+  +   N+G+I++ +GE E A + F
Sbjct: 296 YNLSS--IYYDQG----NIQEAKQCLEKAIKINPLYDQAHYNLGLIYYNQGELEEAKRCF 349



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 81/347 (23%), Positives = 142/347 (40%), Gaps = 46/347 (13%)

Query: 302 PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSA 361
           P +    YNL   +++ GD E A   Y   V +IN P  +   +  LG++     +   A
Sbjct: 17  PLEQDLLYNLGTIFNTNGDVENAKKCY-EKVLQIN-PLSYQ-AHNDLGKICQNKKNIEDA 73

Query: 362 LTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLI 421
             ++EK L+I P  C  +  LG +Y   G IE AQ+   KA ++D +  QA  +L   L+
Sbjct: 74  KLHYEKALKINPQYCMAIVNLGTVYYGQGMIEDAQQQYEKALQLDNKFYQAHFNLA--LL 131

Query: 422 SSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALG----- 476
             D G   +A +     L+   E  P   L N+G+I+  +G ++ A + +   L      
Sbjct: 132 YDDKGMIEEAKQYYEQTLQANQEYYP--ALYNLGLIYQNEGHYQEARRCYLITLDINPQF 189

Query: 477 -------DGIWLTL--------------------LDSKTKTYVIDASASMLQFKDMQLFH 509
                    I+ +L                    LD+      I  S  M++ +  Q + 
Sbjct: 190 YQAYISLGCIYFSLGMLEDAQNYCEKALQINNKSLDAHLNLAFIYDSKDMIE-EARQSYE 248

Query: 510 RFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIA 569
           +       +    N + +++    +LE+      A V Y   +     Y  AY  L++I 
Sbjct: 249 QVLQINPKLYQAQNNLGLIYRKKEMLEE------AKVCYEKSIQINDQYYQAYYNLSSIY 302

Query: 570 KARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF 616
             + N+Q + + + +A+K+N  Y  A   LG +     +  +AK  F
Sbjct: 303 YDQGNIQEAKQCLEKAIKINPLYDQAHYNLGLIYYNQGELEEAKRCF 349



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 69/296 (23%), Positives = 122/296 (41%), Gaps = 45/296 (15%)

Query: 213 LGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKM--------------- 257
           + +A   +Q+ALQ+DP   + L  L  +     +    +K  EK+               
Sbjct: 2   MKEASLCYQQALQIDPLEQDLLYNLGTIFNTNGDVENAKKCYEKVLQINPLSYQAHNDLG 61

Query: 258 ----------------QRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG 301
                           ++A +I P   MA+  L   ++  G     +Q  E AL + N  
Sbjct: 62  KICQNKKNIEDAKLHYEKALKINPQYCMAIVNLGTVYYGQGMIEDAQQQYEKALQLDNKF 121

Query: 302 PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSA 361
                +++NLA  Y  KG  E+A  YY  +++      E+    Y LG +    G ++ A
Sbjct: 122 ---YQAHFNLALLYDDKGMIEEAKQYYEQTLQ---ANQEYYPALYNLGLIYQNEGHYQEA 175

Query: 362 LTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLI 421
              +   L+I P   +   +LG IY  LG +E AQ    KA +I+ +   A ++L  +  
Sbjct: 176 RRCYLITLDINPQFYQAYISLGCIYFSLGMLEDAQNYCEKALQINNKSLDAHLNLAFIYD 235

Query: 422 SSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDAL 475
           S D        + AR   ++  +  P   +  NN+G+I+ +K   E A   ++ ++
Sbjct: 236 SKDM------IEEARQSYEQVLQINPKLYQAQNNLGLIYRKKEMLEEAKVCYEKSI 285


>gi|20090225|ref|NP_616300.1| O-linked N-acetylglucosamine transferase [Methanosarcina
           acetivorans C2A]
 gi|19915217|gb|AAM04780.1| O-linked N-acetylglucosamine transferase [Methanosarcina
           acetivorans C2A]
          Length = 292

 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 74/293 (25%), Positives = 131/293 (44%), Gaps = 28/293 (9%)

Query: 131 WVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQ 190
           W  KG  L      ++A  A+   LE   DN   L  +  V  +  RY ++L+ +++AL+
Sbjct: 6   WYSKGVALQELKRYKEALDAYNKALEISPDNPKILFNKGLVLKSLMRYDEALDAFEKALE 65

Query: 191 VHPS-----CPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV--ALAVMDLQ 243
           ++P+     C  A  L +G+ +Y+     +A  AF RA+ L PE+ E      +A+ +++
Sbjct: 66  INPTDAKTWCFKA-ELLLGIMKYE-----EALDAFYRAVSLAPEDPEVWYRRGMALREMR 119

Query: 244 ANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG-- 301
           A E A     M+ +++A ++Y       +  A+ +   G      +  + AL   N    
Sbjct: 120 AYEDA-----MDDLEKAIQLYSKNYDISSMSASEWCKKGMGLCKIKSYQEALDAFNRALE 174

Query: 302 --PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEIN-----KPHEFIFPYYGLGQVQLK 354
             PT   + YN   +    G  E+A LY   +V+  +      P    F +Y  G     
Sbjct: 175 LNPTNGKALYNKGVALRWLGKNEEAKLYLEKAVEVFDGKIKANPENARF-WYNKGIALRD 233

Query: 355 LGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 407
           L  ++ AL  FEK ++I P   +     G +Y ++ + +KA E   +A  I+P
Sbjct: 234 LERYKEALEAFEKAIDINPSFTKAWIGKGIVYDRVKKHQKAMEAYERAVDINP 286



 Score = 48.9 bits (115), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 48/164 (29%), Positives = 79/164 (48%), Gaps = 21/164 (12%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAF--KIVLEADRDNVPALLGQAC 170
           A   + KA  I+  +  TW  K +LLL   + E+A  AF   + L  +   V    G A 
Sbjct: 56  ALDAFEKALEINPTDAKTWCFKAELLLGIMKYEEALDAFYRAVSLAPEDPEVWYRRGMAL 115

Query: 171 VEFNRGRYSDSLEFYKRALQVHP--------SCPGAIRLGIGLCRYKLGQLGKARQAFQR 222
            E     Y D+++  ++A+Q++         S     + G+GLC+ K  Q  +A  AF R
Sbjct: 116 REMR--AYEDAMDDLEKAIQLYSKNYDISSMSASEWCKKGMGLCKIKSYQ--EALDAFNR 171

Query: 223 ALQLDPENVEALV--ALAVMDLQANEAAGIRKGMEKMQRAFEIY 264
           AL+L+P N +AL    +A+  L  NE A +      +++A E++
Sbjct: 172 ALELNPTNGKALYNKGVALRWLGKNEEAKLY-----LEKAVEVF 210



 Score = 45.8 bits (107), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 41/132 (31%), Positives = 62/132 (46%), Gaps = 6/132 (4%)

Query: 345 YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAK 404
           +Y  G    +L  ++ AL  + K LEI PDN + L   G +   L + ++A +   KA +
Sbjct: 6   WYSKGVALQELKRYKEALDAYNKALEISPDNPKILFNKGLVLKSLMRYDEALDAFEKALE 65

Query: 405 IDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGE 463
           I+P DA+ +    ELL+       ALDAF  A +L      E P EV    G+   E   
Sbjct: 66  INPTDAKTWCFKAELLLGIMKYEEALDAFYRAVSL----APEDP-EVWYRRGMALREMRA 120

Query: 464 FESAHQSFKDAL 475
           +E A    + A+
Sbjct: 121 YEDAMDDLEKAI 132



 Score = 39.7 bits (91), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 38/159 (23%), Positives = 69/159 (43%), Gaps = 9/159 (5%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
           A Q Y+K   I     S W  KG  L      ++A  AF   LE +  N  AL  +    
Sbjct: 131 AIQLYSKNYDISSMSASEWCKKGMGLCKIKSYQEALDAFNRALELNPTNGKALYNKGVAL 190

Query: 173 FNRGRYSDSLEFYKRALQVH----PSCPGAIRLGI--GLCRYKLGQLGKARQAFQRALQL 226
              G+  ++  + ++A++V      + P   R     G+    L +  +A +AF++A+ +
Sbjct: 191 RWLGKNEEAKLYLEKAVEVFDGKIKANPENARFWYNKGIALRDLERYKEALEAFEKAIDI 250

Query: 227 DPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYP 265
           +P   +A +   ++    +     +K ME  +RA +I P
Sbjct: 251 NPSFTKAWIGKGIV---YDRVKKHQKAMEAYERAVDINP 286


>gi|254414719|ref|ZP_05028484.1| tetratricopeptide repeat domain protein [Coleofasciculus
           chthonoplastes PCC 7420]
 gi|196178567|gb|EDX73566.1| tetratricopeptide repeat domain protein [Coleofasciculus
           chthonoplastes PCC 7420]
          Length = 942

 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 82/357 (22%), Positives = 146/357 (40%), Gaps = 80/357 (22%)

Query: 70  EIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPS 129
           +I+EY A   + +       G  Y  LG+ E            A   Y+KA +I   + +
Sbjct: 8   DINEYLAQQWFNQ-------GCEYFQLGQFEQ-----------AIASYDKALQIKPDDHN 49

Query: 130 TWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRAL 189
            W  +G  LL  GE E+A ++F+  L+   D+  A L +       G Y +++ F+ +A+
Sbjct: 50  AWYNRGTALLNIGEYEEAIASFEKALQFKPDSYEAWLNRGLALAKLGEYEEAITFFDKAI 109

Query: 190 QVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEAL--VALAVMDLQANEA 247
           Q+ P    A  L  GL   KLG+  +A  ++ +A+Q+ P+  E      L + DL   E 
Sbjct: 110 QIKPDSYEAW-LNRGLALAKLGEYEEAIASYDKAIQIKPDKHETWHNWGLVLDDLGEYEE 168

Query: 248 AGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHS 307
           A     +    +A +  P                                          
Sbjct: 169 A-----IASYDKALQCKP------------------------------------------ 181

Query: 308 YYNLARSYHSKG-------DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRS 360
             +L  ++H++G       +YEKA   Y  +++     H+    ++  G+    LG++  
Sbjct: 182 --DLHETWHNRGAALADLREYEKAIASYDKALQFKPDLHKT---WHNRGKALGDLGEYEK 236

Query: 361 ALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 417
           A+ +++K L+I PD  E   + G +  +LG+ EKA     KA +  P    A+++ G
Sbjct: 237 AIVSYDKALQIKPDKHEAWLSRGLVLAELGEYEKAIASYDKALQFKPDFHDAWLNRG 293



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 68/292 (23%), Positives = 118/292 (40%), Gaps = 48/292 (16%)

Query: 131 WVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQ 190
           W  +G      G+ EQA +++   L+   D+  A   +     N G Y +++  +++ALQ
Sbjct: 17  WFNQGCEYFQLGQFEQAIASYDKALQIKPDDHNAWYNRGTALLNIGEYEEAIASFEKALQ 76

Query: 191 VHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV--ALAVMDLQANEAA 248
             P    A  L  GL   KLG+  +A   F +A+Q+ P++ EA +   LA+  L   E A
Sbjct: 77  FKPDSYEAW-LNRGLALAKLGEYEEAITFFDKAIQIKPDSYEAWLNRGLALAKLGEYEEA 135

Query: 249 GIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSY 308
                +    +A +I                                      P K  ++
Sbjct: 136 -----IASYDKAIQI-------------------------------------KPDKHETW 153

Query: 309 YNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKV 368
           +N        G+YE+A   Y  +++     HE    ++  G     L ++  A+ +++K 
Sbjct: 154 HNWGLVLDDLGEYEEAIASYDKALQCKPDLHET---WHNRGAALADLREYEKAIASYDKA 210

Query: 369 LEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 420
           L+  PD  +T    G     LG+ EKA     KA +I P   +A++  G +L
Sbjct: 211 LQFKPDLHKTWHNRGKALGDLGEYEKAIVSYDKALQIKPDKHEAWLSRGLVL 262



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/173 (27%), Positives = 80/173 (46%), Gaps = 11/173 (6%)

Query: 305 SHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTN 364
           +  ++N    Y   G +E+A   Y  +++     H     +Y  G   L +G++  A+ +
Sbjct: 14  AQQWFNQGCEYFQLGQFEQAIASYDKALQIKPDDHNA---WYNRGTALLNIGEYEEAIAS 70

Query: 365 FEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSD 424
           FEK L+  PD+ E     G    +LG+ E+A     KA +I P   +A+++ G  L    
Sbjct: 71  FEKALQFKPDSYEAWLNRGLALAKLGEYEEAITFFDKAIQIKPDSYEAWLNRGLAL---- 126

Query: 425 TGAALDAFKTARTLLKKAGEEVPI--EVLNNIGVIHFEKGEFESAHQSFKDAL 475
             A L  ++ A     KA +  P   E  +N G++  + GE+E A  S+  AL
Sbjct: 127 --AKLGEYEEAIASYDKAIQIKPDKHETWHNWGLVLDDLGEYEEAIASYDKAL 177


>gi|293651727|pdb|2WQH|A Chain A, Crystal Structure Of Ctpr3y3
          Length = 125

 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 68/120 (56%), Gaps = 13/120 (10%)

Query: 303 TKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFP-----YYGLGQVQLKLGD 357
             + ++YNL  +Y+ +GDY++A  YY  +++        ++P     +Y LG    K GD
Sbjct: 7   NSAEAWYNLGNAYYKQGDYDEAIEYYQKALE--------LYPNNAEAWYNLGNAYYKQGD 58

Query: 358 FRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 417
           +  A+  ++K LE+YP+N E    LG+ Y + G  ++A E  +KA ++ P +A+A  +LG
Sbjct: 59  YDEAIEYYQKALELYPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELYPNNAEAKQNLG 118



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 54/101 (53%), Gaps = 1/101 (0%)

Query: 345 YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAK 404
           +Y LG    K GD+  A+  ++K LE+YP+N E    LG+ Y + G  ++A E  +KA +
Sbjct: 12  WYNLGNAYYKQGDYDEAIEYYQKALELYPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALE 71

Query: 405 IDPRDAQAFIDLGELLI-SSDTGAALDAFKTARTLLKKAGE 444
           + P +A+A+ +LG       D   A++ ++ A  L     E
Sbjct: 72  LYPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELYPNNAE 112



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/116 (28%), Positives = 61/116 (52%), Gaps = 16/116 (13%)

Query: 274 LANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK 333
           L N ++  G +    +  + AL +    P  + ++YNL  +Y+ +GDY++A  YY  +++
Sbjct: 15  LGNAYYKQGDYDEAIEYYQKALELY---PNNAEAWYNLGNAYYKQGDYDEAIEYYQKALE 71

Query: 334 EINKPHEFIFP-----YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGH 384
                   ++P     +Y LG    K GD+  A+  ++K LE+YP+N E  + LG+
Sbjct: 72  --------LYPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELYPNNAEAKQNLGN 119



 Score = 45.1 bits (105), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 29/116 (25%), Positives = 56/116 (48%), Gaps = 5/116 (4%)

Query: 96  LGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVL 155
           LG    KQ + +E    A +YY KA  +  +    W   G     +G+ ++A   ++  L
Sbjct: 15  LGNAYYKQGDYDE----AIEYYQKALELYPNNAEAWYNLGNAYYKQGDYDEAIEYYQKAL 70

Query: 156 EADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLG 211
           E   +N  A        + +G Y +++E+Y++AL+++P+   A +  +G  + K G
Sbjct: 71  ELYPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELYPNNAEA-KQNLGNAKQKQG 125



 Score = 42.0 bits (97), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 32/129 (24%), Positives = 55/129 (42%), Gaps = 6/129 (4%)

Query: 191 VHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGI 250
           + P         +G   YK G   +A + +Q+AL+L P N EA   L     +  +    
Sbjct: 3   MDPGNSAEAWYNLGNAYYKQGDYDEAIEYYQKALELYPNNAEAWYNLGNAYYKQGD---Y 59

Query: 251 RKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYN 310
            + +E  Q+A E+YP  A A   L N ++  G +    +  + AL +    P  + +  N
Sbjct: 60  DEAIEYYQKALELYPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELY---PNNAEAKQN 116

Query: 311 LARSYHSKG 319
           L  +   +G
Sbjct: 117 LGNAKQKQG 125


>gi|268317305|ref|YP_003291024.1| hypothetical protein Rmar_1752 [Rhodothermus marinus DSM 4252]
 gi|262334839|gb|ACY48636.1| Tetratricopeptide TPR_2 repeat protein [Rhodothermus marinus DSM
           4252]
          Length = 409

 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 68/259 (26%), Positives = 114/259 (44%), Gaps = 23/259 (8%)

Query: 175 RGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEAL 234
           RG++ +++  ++R L + P+       GIG    +LG+   AR A + AL+ D    EA 
Sbjct: 117 RGQFREAIALFRRELALRPNALSW--RGIGRAYAELGRPDSARLALETALRYDSTYAEAW 174

Query: 235 VALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETA 294
           + LA  +L  NE     + +   +RA+E+ P   +A   L N    TGQ      L E+ 
Sbjct: 175 LDLA--ELNENEGR-YDEALRAARRAWELAPKSLVARYRLGNLLLLTGQPAQARPLLES- 230

Query: 295 LAVTNHGPTKSHSYYNLARSYHSKGDYEKA--------------GLYYMASVKEINKPHE 340
             V    P    ++Y+L R     G+ E A                   A +   N P +
Sbjct: 231 --VVQEAPWHQAAHYSLGRVLQQLGETEAARRMLERAEALRALQAKVEQAELLVANTPRD 288

Query: 341 FIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLR 400
             + Y  LG +  +LG +R AL  ++    + PD+ E    +  +++ LG+ ++A  LL 
Sbjct: 289 -PYAYATLGSLLRRLGQYREALYAYQVAHFLAPDHLEFQNNMAVLHLLLGEEDRAIALLE 347

Query: 401 KAAKIDPRDAQAFIDLGEL 419
            A + D      +I+LG L
Sbjct: 348 AAVQRDTTFVDGWINLGIL 366


>gi|374573518|ref|ZP_09646614.1| mannosyltransferase OCH1-like enzyme [Bradyrhizobium sp. WSM471]
 gi|374421839|gb|EHR01372.1| mannosyltransferase OCH1-like enzyme [Bradyrhizobium sp. WSM471]
          Length = 1145

 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 112/496 (22%), Positives = 201/496 (40%), Gaps = 41/496 (8%)

Query: 136 QLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSC 195
           +LL   G   +A+  F+ ++  D  ++   +    +  +     ++LE     L+  P+ 
Sbjct: 204 RLLKQSGRNLEAAETFRKLITVDPTDISYRIELGHILRDIDALDEALEVLTAVLEQEPAN 263

Query: 196 PGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDL-QANEAAGIRKGM 254
             A  + +G    K  +L  A +AF+RA+ L P N  +L AL + +  ++N  A     +
Sbjct: 264 ASAW-VAMGWLHRKAARLDPAAEAFRRAVDLQPTNAGSLHALGISERDRSNHGAS----L 318

Query: 255 EKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARS 314
           +   RA ++ P        + N     G+          AL      P     +  L  +
Sbjct: 319 DCFNRARDVDPRALYIRQEICNSLRNLGRFDDAAAQYRDAL---RDWPASRELHLGLGYA 375

Query: 315 YHSKGDYEKAGLYYMASVKE----INKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLE 370
             S G  ++A   + A+  +     N P E        G V LKLG    A+  F + L 
Sbjct: 376 LRSAGHSDEALAAFDAATGDDPAHPNAPIE-------AGHVLLKLGRPTEAVERFREALT 428

Query: 371 IYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALD 430
             P N   L  L +   +LGQ+++A+  LR+     P    A + LG LL   D    LD
Sbjct: 429 RAPGNPSALVGLSYALRRLGQLDQAETALREVLATQPDHGGARVALGHLL---DAQYRLD 485

Query: 431 AFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKT 488
               A  L  +     P   E    +G IH  +G+ ++A  SF+ A          +   
Sbjct: 486 ---EAAELFSQVIASQPDHAESYGALGNIHRRRGDRDAALASFRRA-------AAAEPAN 535

Query: 489 KTYVIDASASMLQFKDMQLFHRFENDGNHV--ELPWNKVTVLFNLARLLEQIHDTVAASV 546
           +  ++D +   ++ +D+          N V    P  +   L    +LL +      A V
Sbjct: 536 EMRLLDVA---VELRDLGQLDESAAVINRVLASAP-TEARALMQRGQLLRRQDRRDEALV 591

Query: 547 LYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKN 606
           +++ ++  + D   A +  A+  +A    QL+ + +++AL     +  AL  L +L +++
Sbjct: 592 VFKQLIAHHPDNAQAMVEAASEERALGRPQLATQWLDQALIAEADHVGALIGLAELAMQS 651

Query: 607 DDWVKAKETFRAASDA 622
           DD   A E +R A+ A
Sbjct: 652 DDAEGALEIYRRAAAA 667



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 127/577 (22%), Positives = 217/577 (37%), Gaps = 92/577 (15%)

Query: 81  ERIAILNALGVYYTYLGKIE-TKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLL 139
           E++A L+A     T    IE  +Q  K    + +   + +A+  D    +  +  G   L
Sbjct: 12  EKLAGLSAPDAAETARSLIEQGRQLRKANDRVGSLAAFARATDADPSNVTAAIECGYDHL 71

Query: 140 AKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAI 199
              ++ +A  AF+  L  D DN   L+G      +    +++   ++R L++ P   GA 
Sbjct: 72  HLVQIPEARDAFERGLALDADNKSGLIGLGHTFRHLRDLAEAQRCFQRVLELEPGHAGA- 130

Query: 200 RLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQR 259
            +G+G     LG+  +A  AF  A +  P N  A V          EAA I +   ++  
Sbjct: 131 SMGLGYTLKSLGRSDQALDAFLSAAKTSPTNTAAKV----------EAANILRDTNRIDN 180

Query: 260 AFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 319
           A  +                      ++EQ           GP+ +     LAR     G
Sbjct: 181 AIALL-------------------QDVIEQ-----------GPSNAGHISALARLLKQSG 210

Query: 320 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 379
              +A   +    K I      I     LG +   +     AL     VLE  P N    
Sbjct: 211 RNLEAAETFR---KLITVDPTDISYRIELGHILRDIDALDEALEVLTAVLEQEPANASAW 267

Query: 380 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS----SDTGAALDAFKTA 435
            A+G ++ +  +++ A E  R+A  + P +A +   LG   IS    S+ GA+LD F  A
Sbjct: 268 VAMGWLHRKAARLDPAAEAFRRAVDLQPTNAGSLHALG---ISERDRSNHGASLDCFNRA 324

Query: 436 RTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIW--------------- 480
           R +  +A   +  E+ N++  +    G F+ A   ++DAL D  W               
Sbjct: 325 RDVDPRA-LYIRQEICNSLRNL----GRFDDAAAQYRDALRD--WPASRELHLGLGYALR 377

Query: 481 --------LTLLDSKT------KTYVIDASASMLQF-KDMQLFHRFENDGNHVELPWNKV 525
                   L   D+ T          I+A   +L+  +  +   RF         P N  
Sbjct: 378 SAGHSDEALAAFDAATGDDPAHPNAPIEAGHVLLKLGRPTEAVERFRE--ALTRAPGNP- 434

Query: 526 TVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEA 585
           + L  L+  L ++     A    R +L    D+  A + L  +  A+  L  + EL ++ 
Sbjct: 435 SALVGLSYALRRLGQLDQAETALREVLATQPDHGGARVALGHLLDAQYRLDEAAELFSQV 494

Query: 586 LKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDA 622
           +     +  +   LG++  +  D   A  +FR A+ A
Sbjct: 495 IASQPDHAESYGALGNIHRRRGDRDAALASFRRAAAA 531


>gi|326430069|gb|EGD75639.1| TPR repeat-containing protein [Salpingoeca sp. ATCC 50818]
          Length = 598

 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 96/380 (25%), Positives = 159/380 (41%), Gaps = 64/380 (16%)

Query: 161 NVPALLGQACVEF-NRGRYSDSLEFYKRALQV--------HPSCPGAIRLGIGLCRYKLG 211
           NV AL     + + ++G Y  ++ FY++AL +        HPS        +GL  Y  G
Sbjct: 164 NVAALYNNLGIAYSDKGEYDKAIVFYEKALAIKVETLGEKHPSTANTYG-NLGLAYYSKG 222

Query: 212 QLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIR--------KGMEKMQRAFEI 263
           +  KA   +++AL +    VE L        Q     GI         K +   ++A  I
Sbjct: 223 EYDKAIAFYEKALAI---RVETLGEKHPSTAQTYNNLGIAYHSKGDYDKAIAYHEKALAI 279

Query: 264 --------YPYCAMALNYLANHFFFTGQH-----FLVEQLTETALAVTNHGPTKSHSYYN 310
                   +P  A+  N L   F   G +     F  + L  T  A+    P+ + +Y N
Sbjct: 280 KVETLGAKHPSTAITYNNLGIAFKNKGDYDRAIAFYEKDLAITVEALGEKHPSTAQTYNN 339

Query: 311 LARSYHSKGDYEKAGLYY----MASVKEINKPHEFIFPYYG-LGQVQLKLGDFRSALTNF 365
           L  ++ +KGDY++A  +Y      +V+ + + H      Y  LG      G++  A+  +
Sbjct: 340 LGIAFKNKGDYDRAIAFYEKDLAITVETLGEKHPSTASTYNNLGSAYYSKGEYDRAIALY 399

Query: 366 EKVLEI--------YPDNCETLKALGHIYVQLGQIEKAQELLRKAAKID--------PRD 409
           EK L I        +P   +T   LG  Y   G+ +KA E+  +A  I         P  
Sbjct: 400 EKALAITAEALGEKHPSTAQTYNNLGAAYADKGEYDKAVEVYEQALAIKVEALGEKHPST 459

Query: 410 AQAFIDLGELLISSDTG---AALDAFKTARTL-LKKAGEE--VPIEVLNNIGVIHFEKGE 463
           AQ + +LG     +D G    A++ ++ A  + ++  GE+       L NIG++H  +G+
Sbjct: 460 AQTYNNLGAAY--ADKGEYDKAVEVYEQALAVKVETLGEKHSSVAMTLENIGLLHDTRGD 517

Query: 464 FESAHQSFKDALGDGIWLTL 483
            E A    + AL DG   T+
Sbjct: 518 KEQACAYMQRAL-DGYTSTV 536



 Score = 45.4 bits (106), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 58/216 (26%), Positives = 88/216 (40%), Gaps = 30/216 (13%)

Query: 282 GQHFLVEQLTETALAV-----TNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMAS----V 332
           G+H       ETALAV        G   +  Y NL  +Y  KG+Y+KA ++Y  +    V
Sbjct: 138 GEHDRAIAYYETALAVYLRTEGEKGRNVAALYNNLGIAYSDKGEYDKAIVFYEKALAIKV 197

Query: 333 KEINKPHEFIFPYYG-LGQVQLKLGDFRSALTNFEKVLEI--------YPDNCETLKALG 383
           + + + H      YG LG      G++  A+  +EK L I        +P   +T   LG
Sbjct: 198 ETLGEKHPSTANTYGNLGLAYYSKGEYDKAIAFYEKALAIRVETLGEKHPSTAQTYNNLG 257

Query: 384 HIYVQLGQIEKAQELLRKAAKID--------PRDAQAFIDLGELLISSDTGAALDAF--K 433
             Y   G  +KA     KA  I         P  A  + +LG    +        AF  K
Sbjct: 258 IAYHSKGDYDKAIAYHEKALAIKVETLGAKHPSTAITYNNLGIAFKNKGDYDRAIAFYEK 317

Query: 434 TARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESA 467
                ++  GE+ P   +  NN+G+    KG+++ A
Sbjct: 318 DLAITVEALGEKHPSTAQTYNNLGIAFKNKGDYDRA 353



 Score = 39.7 bits (91), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 65/297 (21%), Positives = 115/297 (38%), Gaps = 64/297 (21%)

Query: 119 KASRIDMHEPSTWVGKGQLLLA---KGEVEQASSAFK----IVLEADRDNVPAL---LGQ 168
           K   +    PST +    L +A   KG+ ++A + ++    I +EA  +  P+       
Sbjct: 280 KVETLGAKHPSTAITYNNLGIAFKNKGDYDRAIAFYEKDLAITVEALGEKHPSTAQTYNN 339

Query: 169 ACVEF-NRGRYSDSLEFYKRALQV--------HPSCPGAIRLGIGLCRYKLGQLGKARQA 219
             + F N+G Y  ++ FY++ L +        HPS        +G   Y  G+  +A   
Sbjct: 340 LGIAFKNKGDYDRAIAFYEKDLAITVETLGEKHPSTASTYN-NLGSAYYSKGEYDRAIAL 398

Query: 220 FQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFF 279
           +++AL +  E      AL                        E +P  A   N L   + 
Sbjct: 399 YEKALAITAE------ALG-----------------------EKHPSTAQTYNNLGAAYA 429

Query: 280 FTGQHFLVEQLTETALAVTNHG-----PTKSHSYYNLARSYHSKGDYEKAGLYY----MA 330
             G++    ++ E ALA+         P+ + +Y NL  +Y  KG+Y+KA   Y      
Sbjct: 430 DKGEYDKAVEVYEQALAIKVEALGEKHPSTAQTYNNLGAAYADKGEYDKAVEVYEQALAV 489

Query: 331 SVKEINKPHEFI-FPYYGLGQVQLKLGDFRSALTNFEKVLEIY-----PDNCETLKA 381
            V+ + + H  +      +G +    GD   A    ++ L+ Y     PD+ +T  A
Sbjct: 490 KVETLGEKHSSVAMTLENIGLLHDTRGDKEQACAYMQRALDGYTSTVGPDHPDTRDA 546


>gi|198282345|ref|YP_002218666.1| hypothetical protein Lferr_0200 [Acidithiobacillus ferrooxidans
           ATCC 53993]
 gi|198246866|gb|ACH82459.1| TPR repeat-containing protein [Acidithiobacillus ferrooxidans ATCC
           53993]
          Length = 505

 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 81/348 (23%), Positives = 148/348 (42%), Gaps = 21/348 (6%)

Query: 77  DVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQ 136
           ++ +  IAI N+       LG++  +Q +  +    A +  + A  I+ +  +       
Sbjct: 140 NILHNLIAIKNSPSNEMAMLGEVLRRQGKLSD----AERVLSDALNINENNVAALHNLSV 195

Query: 137 LLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCP 196
           LLL      +A  A   VL    DN  ++     +   + R S+    +++AL + P+ P
Sbjct: 196 LLLYLNRYSEAEHAIMKVLSLMPDNAESIFILGAISVGKKRLSEGEIAFRKALSIKPAYP 255

Query: 197 GAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEK 256
            A+ + +G      G++ +A   F++AL + P+ +EAL+ L V       A G +  M++
Sbjct: 256 EAL-MNLGAILSDQGRVDEAIGTFRKALTIKPDYLEALMRLGV-------ALGRQDRMDE 307

Query: 257 ----MQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLA 312
               +++A  I P    AL  L       G+    E L   AL +    P    +  NL 
Sbjct: 308 AETVLRKALAIKPDYPEALMNLGVTLGHEGRWEETETLLRQALTIK---PDYPEALMNLG 364

Query: 313 RSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIY 372
            +   +G         +     I   H        LG    K G +  A T   + + I 
Sbjct: 365 AALSRQGRCLDEAENILRRTLAIQPDHPDAL--VNLGATLNKQGRWNEAETILRQAVAIK 422

Query: 373 PDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 420
           P++ + L  LG +  + G++++A+ +LR+A  I P  A A ++LG +L
Sbjct: 423 PEHADALINLGAVLSKQGRLDEAETILRQALTIMPDQADALVNLGVIL 470


>gi|196232370|ref|ZP_03131223.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus
           Ellin428]
 gi|196223442|gb|EDY17959.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus
           Ellin428]
          Length = 779

 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 85/356 (23%), Positives = 151/356 (42%), Gaps = 31/356 (8%)

Query: 253 GMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG----PTKSHSY 308
           G E +QRA  + P  A A + L N     G+       T+ A+A  +H     P  + ++
Sbjct: 5   GQELLQRAIALNPEDAAAYSNLGNSLAAQGR-------TDEAIAAYDHAILLKPDYTEAH 57

Query: 309 YNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKV 368
           YN   +  S+G  E+A   +  ++  + KP E+   YY +G   ++ G    A+  +   
Sbjct: 58  YNRGNALRSQGKLEEALAAFCKAI--VLKP-EYAEAYYNMGITMMECGKLDQAINAYACA 114

Query: 369 LEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGA- 427
           +   PD  E    LG+   + G  E A    R+A +I P  A+AF +LG  L  +   A 
Sbjct: 115 IRYKPDFAEAHNNLGNAEARRGHFESAVAAYRRAIQIRPNYAEAFNNLGTALSKAGQSAE 174

Query: 428 ALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSK 487
           A+ A+  A +L      + P E  +N+G+   E+   E A Q+++ AL        L+S 
Sbjct: 175 AITAYLNAISL----KPQFP-EAYHNLGMALAEQRRLEEATQAYRRALE-------LNSN 222

Query: 488 TKTYVIDASASMLQFKDMQLFHRFENDGNH-VELPWNKVTVLFNLARLLEQIHDTVAASV 546
                 +   ++++     LF       NH + L  +      NL   L  ++    A  
Sbjct: 223 APQPWNNLGTTLIE---QGLFTEGATACNHALALDPDFADAQSNLGVALAGLNRFAEAIA 279

Query: 547 LYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDL 602
            +R  L    D    +  L  + + + NL  +++    AL +   +  A++ LG++
Sbjct: 280 AFRSALQLQPDNATVHFNLGNVFRDQRNLDQAVDEYQRALTLEPMFMEAITNLGNV 335



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 77/346 (22%), Positives = 132/346 (38%), Gaps = 46/346 (13%)

Query: 175 RGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEAL 234
           +GR  +++  Y  A+ + P    A     G      G+L +A  AF +A+ L PE  EA 
Sbjct: 33  QGRTDEAIAAYDHAILLKPDYTEA-HYNRGNALRSQGKLEEALAAFCKAIVLKPEYAEAY 91

Query: 235 VALAVMDLQANE--------AAGIR-----------------------KGMEKMQRAFEI 263
             + +  ++  +        A  IR                         +   +RA +I
Sbjct: 92  YNMGITMMECGKLDQAINAYACAIRYKPDFAEAHNNLGNAEARRGHFESAVAAYRRAIQI 151

Query: 264 YPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEK 323
            P  A A N L       GQ    E +T    A++   P    +Y+NL  +   +   E+
Sbjct: 152 RPNYAEAFNNLGTALSKAGQS--AEAITAYLNAIS-LKPQFPEAYHNLGMALAEQRRLEE 208

Query: 324 AGLYYMASVK-EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKAL 382
           A   Y  +++   N P     P+  LG   ++ G F    T     L + PD  +    L
Sbjct: 209 ATQAYRRALELNSNAPQ----PWNNLGTTLIEQGLFTEGATACNHALALDPDFADAQSNL 264

Query: 383 GHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISS-DTGAALDAFKTARTLLKK 441
           G     L +  +A    R A ++ P +A    +LG +     +   A+D ++ A TL   
Sbjct: 265 GVALAGLNRFAEAIAAFRSALQLQPDNATVHFNLGNVFRDQRNLDQAVDEYQRALTL--- 321

Query: 442 AGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSK 487
             E + +E + N+G +  + G+   A   ++  L     +T L S 
Sbjct: 322 --EPMFMEAITNLGNVFRDCGKVNEALAIYRRGLSSNSSVTHLRSN 365



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 60/274 (21%), Positives = 115/274 (41%), Gaps = 22/274 (8%)

Query: 135 GQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS 194
           G  ++  G+++QA +A+   +    D   A       E  RG +  ++  Y+RA+Q+ P+
Sbjct: 95  GITMMECGKLDQAINAYACAIRYKPDFAEAHNNLGNAEARRGHFESAVAAYRRAIQIRPN 154

Query: 195 CPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGM 254
              A    +G    K GQ  +A  A+  A+ L P+  EA   L    +   E   + +  
Sbjct: 155 YAEAFN-NLGTALSKAGQSAEAITAYLNAISLKPQFPEAYHNLG---MALAEQRRLEEAT 210

Query: 255 EKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQ--LTETALAVTNHG----PTKSHSY 308
           +  +RA E+        N L           L+EQ   TE A A  NH     P  + + 
Sbjct: 211 QAYRRALELNSNAPQPWNNLGTT--------LIEQGLFTEGATAC-NHALALDPDFADAQ 261

Query: 309 YNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKV 368
            NL  +      + +A   + ++++   +P      ++ LG V     +   A+  +++ 
Sbjct: 262 SNLGVALAGLNRFAEAIAAFRSALQL--QPDNATV-HFNLGNVFRDQRNLDQAVDEYQRA 318

Query: 369 LEIYPDNCETLKALGHIYVQLGQIEKAQELLRKA 402
           L + P   E +  LG+++   G++ +A  + R+ 
Sbjct: 319 LTLEPMFMEAITNLGNVFRDCGKVNEALAIYRRG 352


>gi|330820193|ref|YP_004349055.1| TPR repeat-containing protein [Burkholderia gladioli BSR3]
 gi|327372188|gb|AEA63543.1| TPR repeat-containing protein [Burkholderia gladioli BSR3]
          Length = 786

 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 68/289 (23%), Positives = 127/289 (43%), Gaps = 10/289 (3%)

Query: 132 VGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQV 191
           + +G +  A     +A  A++  L  D D++ A    A    + G+ + ++E Y   L+ 
Sbjct: 75  LARGHVFAAAQCFAEAIGAYRQALALDADSIDAHFALASALQSAGQAAPAIEAYTALLER 134

Query: 192 HPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIR 251
            P+   A+   +G C  +LG+   A+ A+ RAL+L P + +AL  L  + L   +   + 
Sbjct: 135 DPARVDALN-NLGNCHRQLGEHQAAQAAYLRALELQPGDADALTNLGTLALATGQ---LD 190

Query: 252 KGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNL 311
           + +  ++ A ++ P   + L  L       G+      L    LA+    P    + YNL
Sbjct: 191 ESVALLEMARQVAPDSPVVLANLGVALHRHGEFARSAALLTRTLALD---PVFPEAAYNL 247

Query: 312 ARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEI 371
           A + H+ G   +A  +Y  ++++     +    Y  LG V  + G    A   F+  + +
Sbjct: 248 ANALHALGRRREALDHYQRAIEQAPAHADA---YNNLGVVYQEAGSLHDAADAFDTAIRL 304

Query: 372 YPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 420
                  L  L      LG +++A+  LR A  +DPR + +  +LG +L
Sbjct: 305 RSAFLAALNNLAVTMRMLGAMDEAEARLRDALAVDPRHSASHNNLGNVL 353



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 69/298 (23%), Positives = 121/298 (40%), Gaps = 45/298 (15%)

Query: 211 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANE-AAGIRKGMEKMQRAFEIYPYCAM 269
           G+L +AR+ +QRAL L+P     +  L +++LQ+   AA +      + RA     Y   
Sbjct: 17  GRLAEARELYQRALALEPGEANLMFRLGMLELQSGAYAAALDWLDAALARAPGNARY--- 73

Query: 270 ALNYLANHFFFTGQHFLVEQLT--ETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLY 327
              +LA    F       E +     ALA+         +++ LA +  S G    A   
Sbjct: 74  ---HLARGHVFAAAQCFAEAIGAYRQALALDA---DSIDAHFALASALQSAGQAAPAIEA 127

Query: 328 YMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYV 387
           Y A ++   +    +     LG    +LG+ ++A   + + LE+ P + + L  LG + +
Sbjct: 128 YTALLE---RDPARVDALNNLGNCHRQLGEHQAAQAAYLRALELQPGDADALTNLGTLAL 184

Query: 388 QLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL-------------------------IS 422
             GQ++++  LL  A ++ P       +LG  L                          +
Sbjct: 185 ATGQLDESVALLEMARQVAPDSPVVLANLGVALHRHGEFARSAALLTRTLALDPVFPEAA 244

Query: 423 SDTGAALDAFKTARTLL---KKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDAL 475
            +   AL A    R  L   ++A E+ P   +  NN+GV++ E G    A  +F  A+
Sbjct: 245 YNLANALHALGRRREALDHYQRAIEQAPAHADAYNNLGVVYQEAGSLHDAADAFDTAI 302


>gi|301122157|ref|XP_002908805.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262099567|gb|EEY57619.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 632

 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 96/378 (25%), Positives = 158/378 (41%), Gaps = 30/378 (7%)

Query: 106 KEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPAL 165
           K  ++ LA   ++KASRI   +   W   G + L    +++A   FK++L  D  N  A 
Sbjct: 127 KAGNYGLARMIFSKASRISF-DAEVWTSWGSMELETKNLQEAKRIFKVILATDPQNPMAG 185

Query: 166 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 225
           LG A  E   G   ++ E ++  L+ HP     I    G+   K   +G AR  FQ A+ 
Sbjct: 186 LGMALWEVQAGHPDEARERFQELLEEHPKDI-LIMQAYGVFEAKCQHVGLARSIFQNAVS 244

Query: 226 LDPENVEALVALAVMDLQANEAAGIRK-GMEKMQRAFEIYPYCAMALNYLANHFFFTGQH 284
                 +   A A    +A   AG+ K  +  +  AFE +P     +   A   F  G  
Sbjct: 245 HPRATGQVWHAWA----KAEYDAGLYKNALAVISTAFERFPTHKWLVLLGAMAHFKLGDV 300

Query: 285 F----LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA-GLYYMASVKEINKPH 339
           +       +L +  L V    P+  +SY   A+     G+ + A GLY    V+ + +  
Sbjct: 301 YEARRAYRRLIDGGLYVE---PSAFNSY---AKMEEELGNEDAAVGLY----VEALEQHP 350

Query: 340 EFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELL 399
           + +     L  +  + G  R+A   FEK LE        L A G    Q G+++ A+EL 
Sbjct: 351 DHVPSMMSLAILYKRRGRMRNARKIFEKALENLQHTGPILHAFGDFEEQHGELDNARELY 410

Query: 400 RKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIE--VLNNIGVI 457
            +A  + P   +++  L  +       A L  ++ AR+ L  A + VP +  +L  +  I
Sbjct: 411 DEATNVQPTTVESWRALARV------EARLKNYEAARSALTMASQHVPNDAPLLVELAKI 464

Query: 458 HFEKGEFESAHQSFKDAL 475
                 F +A  + + AL
Sbjct: 465 EQRNRRFPAARTALEKAL 482


>gi|195430888|ref|XP_002063480.1| GK21381 [Drosophila willistoni]
 gi|194159565|gb|EDW74466.1| GK21381 [Drosophila willistoni]
          Length = 1059

 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 109/503 (21%), Positives = 203/503 (40%), Gaps = 38/503 (7%)

Query: 118 NKASRIDMHEPSTWVGKGQLLLAKGEV-----EQASSAFKIVLEADRDNVPALLGQACVE 172
           N   +++ H+P +    G L LA  E      E A      +   D  N   LL  + + 
Sbjct: 32  NAVGKLNEHQPQSLSSVGLLELAHREYQAVDYENAEKHCMQLWRQDSTNTGVLLLLSSIH 91

Query: 173 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 232
           F   R   S +F   A++ +P    A    +G    + GQL +A   ++RA++L P+ ++
Sbjct: 92  FQCRRLDKSAQFSTLAIKQNPVLAEAYS-NLGNVFKERGQLQEALDNYRRAVRLKPDFID 150

Query: 233 ALVALAVMDLQANEA-AGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLT 291
             + LA   + A +  A ++  +  +Q   ++Y  C  +   L N     G+   +E+  
Sbjct: 151 GYINLAAALVAARDMEAAVQAYITALQYNPDLY--CVRS--DLGNLLKALGR---LEEAK 203

Query: 292 ETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQV 351
              L      P  + ++ NL   ++++G+   A  ++    K +     F+  Y  LG V
Sbjct: 204 ACYLKAIETCPNFAVAWSNLGCVFNAQGEIWLAIHHFE---KAVTLDPNFLDAYINLGNV 260

Query: 352 QLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQ 411
             +   F  A+  + + L + P+N      L  +Y + G I+ A +  R+A ++ P    
Sbjct: 261 LKEARIFDRAVAAYLRALNLSPNNAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPNFPD 320

Query: 412 AFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSF 471
           A+ +L   L   + G   +A +   T L+        + LNN+  I  E+G  E A + +
Sbjct: 321 AYCNLANAL--KEKGQVKEAEECYNTALRLCSNHA--DSLNNLANIKREQGYIEEATRLY 376

Query: 472 KDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNH----VELPWNKVTV 527
             AL             + +   A+A       +Q   + ++  NH    + +       
Sbjct: 377 LKAL-------------EVFPDFAAAHSNLASVLQQQGKLKDALNHYKEAIRIQPTFADA 423

Query: 528 LFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALK 587
             N+   L+++ D   A   Y   +     + DA+  LA+I K   N+  +I+    ALK
Sbjct: 424 YSNMGNTLKELQDVSGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTALK 483

Query: 588 VNGKYPNALSMLGDLELKNDDWV 610
           +   +P+A   L        DW 
Sbjct: 484 LKPDFPDAYCNLAHCLQIVCDWT 506



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 86/386 (22%), Positives = 162/386 (41%), Gaps = 24/386 (6%)

Query: 93  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 152
           Y+ LG +  ++ + +E    A   Y +A R+       ++     L+A  ++E A  A+ 
Sbjct: 118 YSNLGNVFKERGQLQE----ALDNYRRAVRLKPDFIDGYINLAAALVAARDMEAAVQAYI 173

Query: 153 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 210
             L+ + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 174 TALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIETCPNFAVAWS-NLGCVFNAQ 230

Query: 211 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 270
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 231 GEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAAYLRALNLSPNNAVV 287

Query: 271 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 330
              LA  ++  G   L++   +T        P    +Y NLA +   KG  ++A   Y  
Sbjct: 288 HGNLACVYYEQG---LIDLAIDTYRRAIELQPNFPDAYCNLANALKEKGQVKEAEECYNT 344

Query: 331 SVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLG 390
           +++  +   + +     L  ++ + G    A   + K LE++PD       L  +  Q G
Sbjct: 345 ALRLCSNHADSL---NNLANIKREQGYIEEATRLYLKALEVFPDFAAAHSNLASVLQQQG 401

Query: 391 QIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGEEVPIE 449
           +++ A    ++A +I P  A A+ ++G  L    D   AL  +  A  +          +
Sbjct: 402 KLKDALNHYKEAIRIQPTFADAYSNMGNTLKELQDVSGALQCYTRAIQINPAFA-----D 456

Query: 450 VLNNIGVIHFEKGEFESAHQSFKDAL 475
             +N+  IH + G    A QS++ AL
Sbjct: 457 AHSNLASIHKDSGNIPEAIQSYRTAL 482



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 72/332 (21%), Positives = 132/332 (39%), Gaps = 48/332 (14%)

Query: 89  LGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQAS 148
             V ++ LG +   Q E      LA  ++ KA  +D +    ++  G +L      ++A 
Sbjct: 216 FAVAWSNLGCVFNAQGE----IWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAV 271

Query: 149 SAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRY 208
           +A+   L    +N       ACV + +G    +++ Y+RA+++ P+ P A    +     
Sbjct: 272 AAYLRALNLSPNNAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPNFPDAY-CNLANALK 330

Query: 209 KLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCA 268
           + GQ+ +A + +  AL+L   + ++L  LA +     E   I +      +A E++P  A
Sbjct: 331 EKGQVKEAEECYNTALRLCSNHADSLNNLANIK---REQGYIEEATRLYLKALEVFPDFA 387

Query: 269 MALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYY 328
            A                                   HS  NLA     +G  + A  +Y
Sbjct: 388 AA-----------------------------------HS--NLASVLQQQGKLKDALNHY 410

Query: 329 MASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQ 388
             +++   +P  F   Y  +G    +L D   AL  + + ++I P   +    L  I+  
Sbjct: 411 KEAIRI--QP-TFADAYSNMGNTLKELQDVSGALQCYTRAIQINPAFADAHSNLASIHKD 467

Query: 389 LGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 420
            G I +A +  R A K+ P    A+ +L   L
Sbjct: 468 SGNIPEAIQSYRTALKLKPDFPDAYCNLAHCL 499


>gi|85858724|ref|YP_460926.1| hypothetical protein SYN_00192 [Syntrophus aciditrophicus SB]
 gi|85721815|gb|ABC76758.1| tetratricopeptide repeat family protein [Syntrophus aciditrophicus
           SB]
          Length = 563

 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 87/396 (21%), Positives = 170/396 (42%), Gaps = 35/396 (8%)

Query: 87  NALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQ 146
           N +G YY  + K+  + R + E    A QY+ K   +     S  +    L   + ++EQ
Sbjct: 176 NVMGTYY--MAKVLVELRRESE----AEQYFKKTLLLKPSLESALIDLALLYERQKKLEQ 229

Query: 147 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 206
           A + +K  ++   + V   L        +G Y  +   ++ +L +  S    +   +GL 
Sbjct: 230 AVNIYKDFIQRYPEQVGIRLRLGEFYLRQGNYQAAEAVFRDSLTIDDSNKD-VHFTLGLL 288

Query: 207 RYKLGQLGKARQAFQRALQLDPENVEALVALA-VMDLQANEAAGIRKGMEKMQRAFEIYP 265
            Y+  +  +A +AFQ+AL+L P + +    LA V D Q           ++  +A + Y 
Sbjct: 289 YYEQQRYDRAIEAFQKALKLAPSDQKIYYFLASVYDEQ-----------QENDKAMDTYG 337

Query: 266 YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTK----SHSYYNLARSYHSKGDY 321
             A    +  N     G     E   + A+++     +      + Y  L   Y  K  Y
Sbjct: 338 KVAPDSEWYGNARIRMGMLLREEGRIDAAISLIRETLSTEAKAPNLYAYLGSLYQEKAQY 397

Query: 322 EKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKA 381
            +A       +K+  +  E    +YGLG+V  K+  F  ++   ++VLEI P++ E L  
Sbjct: 398 PEAENLLKEGLKDFPRSEEL---HYGLGEVYSKMDRFEDSIKEMKRVLEIDPEHAEALNF 454

Query: 382 LGHIYVQLG-QIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLK 440
           +G+ Y + G  + +A++L+R+A  + P +      +G +    +        + A   LK
Sbjct: 455 IGYSYAERGIHLAEAEKLIRQALILKPDNGYILDSMGWVYFKQNR------IEQAIRYLK 508

Query: 441 KAGEEVPIE--VLNNIGVIHFEKGEFESAHQSFKDA 474
           +A + +P +  +  ++G    + G F+ A  +++ A
Sbjct: 509 EADKRIPDDPTIAEHLGDALRKAGRFQEALDAYRRA 544



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 108/540 (20%), Positives = 208/540 (38%), Gaps = 87/540 (16%)

Query: 289 QLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGL 348
           Q  ETAL    H P  SH    LA  Y  KGD+ +A      S+  ++ P + +  +  L
Sbjct: 62  QELETAL---RHDPLSSHLMKELASLYVEKGDFRRAVDLCKESL--VHDPDD-VDVHLIL 115

Query: 349 GQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIY---------------------- 386
           G + + + D+++A+ ++ KV+EI P N      LG +Y                      
Sbjct: 116 GNLYINMKDYKNAIRSYRKVIEIDPKNTSAYLYLGTLYAETERYDKAVDMYSLLLKNDHD 175

Query: 387 ------------VQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKT 434
                       V+L +  +A++  +K   + P    A IDL   L+         A   
Sbjct: 176 NVMGTYYMAKVLVELRRESEAEQYFKKTLLLKPSLESALIDLA--LLYERQKKLEQAVNI 233

Query: 435 ARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVID 494
            +  +++  E+V I +   +G  +  +G +++A   F+D+      LT+ DS    +   
Sbjct: 234 YKDFIQRYPEQVGIRL--RLGEFYLRQGNYQAAEAVFRDS------LTIDDSNKDVHF-- 283

Query: 495 ASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFK 554
            +  +L ++  +     E     ++L  +   + + LA + ++  +   A   Y  +   
Sbjct: 284 -TLGLLYYEQQRYDRAIEAFQKALKLAPSDQKIYYFLASVYDEQQENDKAMDTYGKVAPD 342

Query: 555 YQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKE 614
            + Y +A +R+  + +    +  +I L+ E L    K PN  + LG L  +   + +A+ 
Sbjct: 343 SEWYGNARIRMGMLLREEGRIDAAISLIRETLSTEAKAPNLYAYLGSLYQEKAQYPEAEN 402

Query: 615 TFRAA-SDATDGKDSYATLS--LGNWNYFA-ALRNEKRAPKLEATHLEKAKELYTRVIVQ 670
             +    D    ++ +  L       + F  +++  KR  +++  H E            
Sbjct: 403 LLKEGLKDFPRSEELHYGLGEVYSKMDRFEDSIKEMKRVLEIDPEHAE------------ 450

Query: 671 HTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPD---VWINLAHVYFAQ 727
                 A N  G   AE+G       +     E       +  PD   +  ++  VYF Q
Sbjct: 451 ------ALNFIGYSYAERG-------IHLAEAEKLIRQALILKPDNGYILDSMGWVYFKQ 497

Query: 728 GNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLR 787
                A++  +   ++     D  I  +L     +A ++Q+   +  RA   AP N  LR
Sbjct: 498 NRIEQAIRYLKEADKRI--PDDPTIAEHLGDALRKAGRFQEALDAYRRAQKYAPENSQLR 555



 Score = 46.6 bits (109), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 97/466 (20%), Positives = 186/466 (39%), Gaps = 53/466 (11%)

Query: 329 MASVKEIN--KPHEFIFPY-YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 385
           + S KEI+   P  +   Y Y LG +    G    A+   E  L   P +   +K L  +
Sbjct: 25  LKSGKEISGRDPSSYTAGYHYTLGVLSALDGRLDDAIQELETALRHDPLSSHLMKELASL 84

Query: 386 YVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEE 445
           YV+ G   +A +L +++   DP D    + LG L I+      +  +K A    +K  E 
Sbjct: 85  YVEKGDFRRAVDLCKESLVHDPDDVDVHLILGNLYIN------MKDYKNAIRSYRKVIEI 138

Query: 446 VP--IEVLNNIGVIHFEKGEFESAHQSFKDALG---DGIWLTLLDSKTKTYVIDASASML 500
            P        +G ++ E   ++ A   +   L    D +  T   +K    +   S +  
Sbjct: 139 DPKNTSAYLYLGTLYAETERYDKAVDMYSLLLKNDHDNVMGTYYMAKVLVELRRESEAEQ 198

Query: 501 QFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVD 560
            FK   L            L  +  + L +LA L E+      A  +Y+  + +Y + V 
Sbjct: 199 YFKKTLL------------LKPSLESALIDLALLYERQKKLEQAVNIYKDFIQRYPEQVG 246

Query: 561 AYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAAS 620
             LRL      + N Q +  +  ++L ++    +    LG L  +   + +A E F+ A 
Sbjct: 247 IRLRLGEFYLRQGNYQAAEAVFRDSLTIDDSNKDVHFTLGLLYYEQQRYDRAIEAFQKAL 306

Query: 621 D--ATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAA 678
               +D K  Y         + A++ +E++         +KA + Y +V         A 
Sbjct: 307 KLAPSDQKIYY---------FLASVYDEQQEN-------DKAMDTYGKVAPDSEWYGNAR 350

Query: 679 NGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQ 738
              G++L E+G+ D +  L  +     + S   + P+++  L  +Y  +  +  A  + +
Sbjct: 351 IRMGMLLREEGRIDAAISLIRE-----TLSTEAKAPNLYAYLGSLYQEKAQYPEAENLLK 405

Query: 739 NCLRKFYYNTDAQILLY-LARTHYEAEQWQDCKKSLLRAIHLAPSN 783
             L+ F     ++ L Y L   + + ++++D  K + R + + P +
Sbjct: 406 EGLKDF---PRSEELHYGLGEVYSKMDRFEDSIKEMKRVLEIDPEH 448


>gi|124024786|ref|YP_001013902.1| hypothetical protein NATL1_00731 [Prochlorococcus marinus str.
           NATL1A]
 gi|123959854|gb|ABM74637.1| Hypothetical protein NATL1_00731 [Prochlorococcus marinus str.
           NATL1A]
          Length = 816

 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 84/352 (23%), Positives = 152/352 (43%), Gaps = 24/352 (6%)

Query: 132 VGKGQLL------LAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFY 185
           + KGQ++       A+G +++A+  ++  ++    +   L     +    G   ++   Y
Sbjct: 42  LSKGQIINQAIQFHAQGNIQKAAKYYQYFIDQGFKDPRVLANYGVILKGFGNSQEAELLY 101

Query: 186 KRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQAN 245
           ++A++++P+   A    +G     LG+L +A  ++++A+++ P     L  L  +    +
Sbjct: 102 RKAIELNPNFADA-HYNLGNTLRDLGKLKEAELSYRKAIEISPNYANTLYNLGTI---LS 157

Query: 246 EAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKS 305
           +   ++      ++A  I P    A   L N     G+    E     A+ ++   P  +
Sbjct: 158 DLGKLQDAEFSYRQAIIINPNYTEAHYNLGNTLRDLGKLKDAELSYRKAIKIS---PNYA 214

Query: 306 HSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNF 365
             + NL       G  + A LY   + K I    +F   Y  LG +   LG+ + A  + 
Sbjct: 215 KVHCNLGTILRDLGKLKDAELY---TRKAIQLNPDFAEAYSNLGNILSDLGNLKEAEISQ 271

Query: 366 EKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDT 425
           +K +E+ PD  E    LG+I   LG+++ A+   RKA +I P  A A  +LG +L     
Sbjct: 272 KKTIELKPDCAEAHSNLGNILRDLGKLKDAELSYRKAIEISPNYANAHSNLGNIL----- 326

Query: 426 GAALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDAL 475
              L   K A    +KA E  P       N+G I  + G F  A + FK AL
Sbjct: 327 -RDLGKLKGAELSYRKAIEISPNYANAHYNLGNILKDIGNFGDALKQFKQAL 377



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 72/290 (24%), Positives = 126/290 (43%), Gaps = 20/290 (6%)

Query: 302 PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSA 361
           P  + ++YNL  +    G  ++A L Y  ++ EI+    +    Y LG +   LG  + A
Sbjct: 109 PNFADAHYNLGNTLRDLGKLKEAELSYRKAI-EISP--NYANTLYNLGTILSDLGKLQDA 165

Query: 362 LTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLI 421
             ++ + + I P+  E    LG+    LG+++ A+   RKA KI P  A+   +LG +L 
Sbjct: 166 EFSYRQAIIINPNYTEAHYNLGNTLRDLGKLKDAELSYRKAIKISPNYAKVHCNLGTIL- 224

Query: 422 SSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDALGDGI 479
                  L   K A    +KA +  P   E  +N+G I  + G  + A  S K      I
Sbjct: 225 -----RDLGKLKDAELYTRKAIQLNPDFAEAYSNLGNILSDLGNLKEAEISQKKT----I 275

Query: 480 WLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIH 539
            L    ++  + + +    + + KD +L +R       +E+  N      NL  +L  + 
Sbjct: 276 ELKPDCAEAHSNLGNILRDLGKLKDAELSYR-----KAIEISPNYANAHSNLGNILRDLG 330

Query: 540 DTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVN 589
               A + YR  +    +Y +A+  L  I K   N   +++   +ALK+N
Sbjct: 331 KLKGAELSYRKAIEISPNYANAHYNLGNILKDIGNFGDALKQFKQALKLN 380



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 67/284 (23%), Positives = 126/284 (44%), Gaps = 16/284 (5%)

Query: 319 GDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCET 378
           G+ ++A L Y  ++ E+N    F   +Y LG     LG  + A  ++ K +EI P+   T
Sbjct: 92  GNSQEAELLYRKAI-ELNP--NFADAHYNLGNTLRDLGKLKEAELSYRKAIEISPNYANT 148

Query: 379 LKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTL 438
           L  LG I   LG+++ A+   R+A  I+P   +A  +LG  L   D G   DA  + R  
Sbjct: 149 LYNLGTILSDLGKLQDAEFSYRQAIIINPNYTEAHYNLGNTL--RDLGKLKDAELSYRKA 206

Query: 439 LKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASAS 498
           +K +     +    N+G I  + G+ + A    + A    I L    ++  + + +  + 
Sbjct: 207 IKISPNYAKVHC--NLGTILRDLGKLKDAELYTRKA----IQLNPDFAEAYSNLGNILSD 260

Query: 499 MLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDY 558
           +   K+ ++  +       +EL  +      NL  +L  +     A + YR  +    +Y
Sbjct: 261 LGNLKEAEISQK-----KTIELKPDCAEAHSNLGNILRDLGKLKDAELSYRKAIEISPNY 315

Query: 559 VDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDL 602
            +A+  L  I +    L+ +     +A++++  Y NA   LG++
Sbjct: 316 ANAHSNLGNILRDLGKLKGAELSYRKAIEISPNYANAHYNLGNI 359



 Score = 46.2 bits (108), Expect = 0.084,   Method: Compositional matrix adjust.
 Identities = 61/297 (20%), Positives = 116/297 (39%), Gaps = 58/297 (19%)

Query: 117 YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK--IVLEADRDNVPALLGQACVEFN 174
           Y KA  I  +  +T    G +L   G+++ A  +++  I++  +       LG    +  
Sbjct: 135 YRKAIEISPNYANTLYNLGTILSDLGKLQDAEFSYRQAIIINPNYTEAHYNLGNTLRDL- 193

Query: 175 RGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEAL 234
            G+  D+   Y++A+++ P+    +   +G     LG+L  A    ++A+QL+P+  EA 
Sbjct: 194 -GKLKDAELSYRKAIKISPNY-AKVHCNLGTILRDLGKLKDAELYTRKAIQLNPDFAEAY 251

Query: 235 VALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETA 294
             L  +    ++   +++     ++  E+ P CA A                        
Sbjct: 252 SNLGNI---LSDLGNLKEAEISQKKTIELKPDCAEA------------------------ 284

Query: 295 LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYG-----LG 349
                      HS  NL       G  + A L Y  +++        I P Y      LG
Sbjct: 285 -----------HS--NLGNILRDLGKLKDAELSYRKAIE--------ISPNYANAHSNLG 323

Query: 350 QVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKID 406
            +   LG  + A  ++ K +EI P+       LG+I   +G    A +  ++A K++
Sbjct: 324 NILRDLGKLKGAELSYRKAIEISPNYANAHYNLGNILKDIGNFGDALKQFKQALKLN 380


>gi|406954284|gb|EKD83208.1| hypothetical protein ACD_39C00819G0002 [uncultured bacterium]
          Length = 447

 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 80/349 (22%), Positives = 146/349 (41%), Gaps = 30/349 (8%)

Query: 135 GQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS 194
            +L L  G+ + A +  + +L+ D DN   ++  A     RG Y ++    +RAL++ P 
Sbjct: 33  SRLYLRNGDNKSAEAVIEKILKIDPDNAQVMVEFADCLIRRGAYEEAAYNIERALELRPG 92

Query: 195 CPGAIRLGIGLCRYKLGQLGKARQA--FQRALQLDPENVEALVALAVMDLQANEAAGIRK 252
              A    I + R    Q    +Q     RA    PE +E  +ALA M  +  +  G   
Sbjct: 93  MSSAF---IAMARLHEAQGCVEKQVSFMMRAANAAPEKIEVRLALAEMLKRYGDFNG--- 146

Query: 253 GMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETAL----AVTNHGPTKSHSY 308
            + + ++  EI P    AL       F  G   L +     A+     +  + P    ++
Sbjct: 147 AVGQYRQILEIQPDLEAAL-------FSLGTMLLRQDDLNGAMNSFRQIIRNNPGAFDAH 199

Query: 309 YNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKV 368
           +NLA     +  +  A  ++  + +   KP       Y + Q   K  D+ SA+   EK+
Sbjct: 200 FNLASGLFRQSKFVMAANHFRVAQR---KPELAQRSLYLMAQCYFKQRDYDSAIVTLEKL 256

Query: 369 LEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAA 428
           L++   N   LK+L  IY    +++ A+E+ R+   + P   +  + L  ++I+      
Sbjct: 257 LQLDESNVSYLKSLAEIYEAADELDMAREVYRRLTSVAPERPEFLVHLASIMIT------ 310

Query: 429 LDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDAL 475
           LD F+ A   L       P  +E    +G ++  +G+  SA + ++  L
Sbjct: 311 LDDFERAEKTLDTLFRLHPGHVEGHRILGDLYARRGDHRSAIEEYRRTL 359



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 95/450 (21%), Positives = 180/450 (40%), Gaps = 56/450 (12%)

Query: 21  QLPRDASDILDIL--KAEQAPLDLWLI--IAREYFKQGKVEQFRQILEEGSSPEIDEYYA 76
           Q P D + +L  L  K+  +P DL L+  ++R Y + G  +    ++E+    +ID   A
Sbjct: 3   QRPGDINGLLGQLEAKSRHSPEDLELMQRLSRLYLRNGDNKSAEAVIEK--ILKIDPDNA 60

Query: 77  DVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQ 136
            V  E    L   G Y      IE                  +A  +     S ++   +
Sbjct: 61  QVMVEFADCLIRRGAYEEAAYNIE------------------RALELRPGMSSAFIAMAR 102

Query: 137 LLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCP 196
           L  A+G VE+  S       A  + +   L  A +    G ++ ++  Y++ L++ P   
Sbjct: 103 LHEAQGCVEKQVSFMMRAANAAPEKIEVRLALAEMLKRYGDFNGAVGQYRQILEIQPDLE 162

Query: 197 GAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAV-------MDLQANEAAG 249
            A+   +G    +   L  A  +F++ ++ +P   +A   LA          + AN    
Sbjct: 163 AAL-FSLGTMLLRQDDLNGAMNSFRQIIRNNPGAFDAHFNLASGLFRQSKFVMAANHFRV 221

Query: 250 IRKGMEKMQRAFEIYPYC----------AMALNYL-----ANHFFFTGQHFLVEQLTETA 294
            ++  E  QR+  +   C           + L  L     +N  +      + E   E  
Sbjct: 222 AQRKPELAQRSLYLMAQCYFKQRDYDSAIVTLEKLLQLDESNVSYLKSLAEIYEAADELD 281

Query: 295 LA------VTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGL 348
           +A      +T+  P +     +LA    +  D+E+A    + ++  ++  H  +  +  L
Sbjct: 282 MAREVYRRLTSVAPERPEFLVHLASIMITLDDFERAE-KTLDTLFRLHPGH--VEGHRIL 338

Query: 349 GQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPR 408
           G +  + GD RSA+  + + L I  +N +    L  +Y  L   E+ Q+ L++A ++   
Sbjct: 339 GDLYARRGDHRSAIEEYRRTLMINENNAQVFLGLARVYRALNSAEEEQQALKRAVEVGCE 398

Query: 409 DAQAFIDLGELLISSDTGAALDAFKTARTL 438
           D + F+ LG+L  +    A+LD F+    L
Sbjct: 399 DPELFLRLGQLERTMKLPASLDRFRRVSEL 428


>gi|407462460|ref|YP_006773777.1| O-linked GlcNAc transferase [Candidatus Nitrosopumilus koreensis
           AR1]
 gi|407046082|gb|AFS80835.1| O-linked GlcNAc transferase [Candidatus Nitrosopumilus koreensis
           AR1]
          Length = 366

 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 74/316 (23%), Positives = 138/316 (43%), Gaps = 36/316 (11%)

Query: 110 FILATQYYNKA-SRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQ 168
           F+  + YY ++  ++D    S       +L  + + E + S    +LE   DN+ AL  +
Sbjct: 2   FVFFSSYYCESFGQVD---TSINFENALMLYKEKKYEGSLSEIDKILEKYPDNIEALNSK 58

Query: 169 ACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDP 228
             +   +G+Y ++L+ +++A  + PS   +I  GIG   + L +   A   F   LQ+D 
Sbjct: 59  GTILLAQGKYVNALQNFEKAATIDPSNLESIN-GIGKAYFHLNRYDAAMNFFGHVLQIDR 117

Query: 229 ENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIY-------PYCAMALNYLANHFFFT 281
            N +AL+           +  +   +E+   +   +       P    AL         T
Sbjct: 118 RNFDALIG----------SGNVLSKLEQFDDSILFFNIVLEKDPRNVDALIGKGTALLNT 167

Query: 282 GQHFLV----EQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINK 337
            QH L     +++ E  L+ T+    K   ++ L        +YEK+ + + A ++  ++
Sbjct: 168 NQHKLALSIYDKILEIDLSNTDALNGKGKIFFEL-------DEYEKSRIAFTAVLE--SE 218

Query: 338 PHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQE 397
           P E I    GL ++ L       +   +EK+L I PDN E L     + V+LG+ ++A E
Sbjct: 219 P-ENIEALLGLSELNLHEHKNIKSQQMYEKILSIDPDNIEALIGKASVLVELGKFDEALE 277

Query: 398 LLRKAAKIDPRDAQAF 413
              +A ++DP +  A 
Sbjct: 278 YFDEALEVDPDNPDAL 293



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 76/158 (48%), Gaps = 12/158 (7%)

Query: 86  LNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVE 145
           +N +G  Y +L + +            A  ++    +ID       +G G +L    + +
Sbjct: 89  INGIGKAYFHLNRYDA-----------AMNFFGHVLQIDRRNFDALIGSGNVLSKLEQFD 137

Query: 146 QASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGL 205
            +   F IVLE D  NV AL+G+     N  ++  +L  Y + L++  S   A+  G G 
Sbjct: 138 DSILFFNIVLEKDPRNVDALIGKGTALLNTNQHKLALSIYDKILEIDLSNTDALN-GKGK 196

Query: 206 CRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQ 243
             ++L +  K+R AF   L+ +PEN+EAL+ L+ ++L 
Sbjct: 197 IFFELDEYEKSRIAFTAVLESEPENIEALLGLSELNLH 234



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 80/320 (25%), Positives = 121/320 (37%), Gaps = 62/320 (19%)

Query: 65  EGSSPEID---EYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKAS 121
           EGS  EID   E Y D     I  LN+ G      GK           ++ A Q + KA+
Sbjct: 35  EGSLSEIDKILEKYPD----NIEALNSKGTILLAQGK-----------YVNALQNFEKAA 79

Query: 122 RIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDS 181
            ID     +  G G+        + A + F  VL+ DR N  AL+G   V     ++ DS
Sbjct: 80  TIDPSNLESINGIGKAYFHLNRYDAAMNFFGHVLQIDRRNFDALIGSGNVLSKLEQFDDS 139

Query: 182 LEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMD 241
           + F+   L+  P    A+ +G G       Q   A   + + L++D  N +AL       
Sbjct: 140 ILFFNIVLEKDPRNVDAL-IGKGTALLNTNQHKLALSIYDKILEIDLSNTDALNG----- 193

Query: 242 LQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG 301
                         K +  FE+  Y    + + A          ++E   E   A+    
Sbjct: 194 --------------KGKIFFELDEYEKSRIAFTA----------VLESEPENIEALLGLS 229

Query: 302 PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSA 361
               H + N+     S+  YEK     + S+   N     I    G   V ++LG F  A
Sbjct: 230 ELNLHEHKNI----KSQQMYEK-----ILSIDPDN-----IEALIGKASVLVELGKFDEA 275

Query: 362 LTNFEKVLEIYPDNCETLKA 381
           L  F++ LE+ PDN + L  
Sbjct: 276 LEYFDEALEVDPDNPDALNG 295



 Score = 46.6 bits (109), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 68/265 (25%), Positives = 108/265 (40%), Gaps = 33/265 (12%)

Query: 349 GQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPR 408
           G + L  G + +AL NFEK   I P N E++  +G  Y  L + + A        +ID R
Sbjct: 59  GTILLAQGKYVNALQNFEKAATIDPSNLESINGIGKAYFHLNRYDAAMNFFGHVLQIDRR 118

Query: 409 DAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAH 468
           +  A I  G +L      + L+ F  +        E+ P  V   IG     KG      
Sbjct: 119 NFDALIGSGNVL------SKLEQFDDSILFFNIVLEKDPRNVDALIG-----KGTALLNT 167

Query: 469 QSFKDALGDGIWLTLLDSKTKTYVIDASAS-MLQFKDMQLFHRFENDGNHVEL------- 520
              K AL   I+  +L+       ID S +  L  K    F   E + + +         
Sbjct: 168 NQHKLAL--SIYDKILE-------IDLSNTDALNGKGKIFFELDEYEKSRIAFTAVLESE 218

Query: 521 PWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIE 580
           P N +  L  L+ L    H  + +  +Y  IL    D ++A +  A++         ++E
Sbjct: 219 PEN-IEALLGLSELNLHEHKNIKSQQMYEKILSIDPDNIEALIGKASVLVELGKFDEALE 277

Query: 581 LVNEALKVNGKYPNALS----MLGD 601
             +EAL+V+   P+AL+    +LGD
Sbjct: 278 YFDEALEVDPDNPDALNGKDLVLGD 302


>gi|268324093|emb|CBH37681.1| hypothetical protein, containing TPR repeats [uncultured archaeon]
 gi|268326410|emb|CBH39998.1| hypothetical membrane protein, containing TPR repeats [uncultured
           archaeon]
          Length = 739

 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 104/436 (23%), Positives = 168/436 (38%), Gaps = 60/436 (13%)

Query: 70  EIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPS 129
           EI+  YA     + A L  LG Y               E  I A   +NKA  I      
Sbjct: 323 EINSQYAKAWNNKGATLGKLGKY---------------EEAIAA---FNKAIEIKPQCAE 364

Query: 130 TWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRAL 189
            W  KG  L   G  E+A +A    +E +     A   +     + GR  +++  Y +A+
Sbjct: 365 AWNNKGAALRDLGRYEEAIAAHDKAIEINSQYARAWNNKGVALCDLGRNEEAIAAYDKAI 424

Query: 190 QVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEAL----VALAVMDLQAN 245
           +++P   GA     G    KLG+  +A  A  +A++++P+  EA      AL  +     
Sbjct: 425 EINPQFAGAWN-NKGAALGKLGRYEEAIAACDKAIEINPQFAEAWNNKGAALGKLGRYEE 483

Query: 246 EAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQH-FLVEQLTETALAVTNHG--- 301
             A   K +E   +  E +    +AL+ L  +      H   +E  ++ A A TN G   
Sbjct: 484 AIAACDKAIETNPQYAEAWNNKGLALSGLGKYEEAIAAHDKAIEINSQYAGAWTNKGIAL 543

Query: 302 --------------------PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEF 341
                               P  + ++ N   +    G YE+A     A  K I    ++
Sbjct: 544 CHLGRYEEAIAACDNAIEINPRDAEAWNNKGVALSGLGKYEEA---IAAHDKAIEINSQY 600

Query: 342 IFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRK 401
              +   G     LG +  A+  +++ +EI P   E     G     LG+ E A      
Sbjct: 601 AGAWNNKGVALRGLGRYEEAIAAYDEAVEINPQYAEAWNNKGIALCHLGKYEGAIAAYDN 660

Query: 402 AAKIDPRDAQAFIDLGELLISSDTG---AALDAFKTARTLLKKAGEEVPIEVLNNIGVIH 458
           A +I+P+ A A+ + G  L  SD G    A+ A+  A  +  +       E  NN GV+ 
Sbjct: 661 AIEINPQYADAWTNKGVAL--SDLGRYEEAIAAYDNAIEINPQLA-----EAWNNKGVVL 713

Query: 459 FEKGEFESAHQSFKDA 474
              G +E A ++F+ A
Sbjct: 714 GWSGRYEEAKEAFEKA 729



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 88/370 (23%), Positives = 150/370 (40%), Gaps = 32/370 (8%)

Query: 115 QYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFN 174
           QY +KA  ID      W  KG +L   G  E+A +A+   +E +     A   +      
Sbjct: 282 QYLDKAVEIDPQYAQIWNNKGIVLGKLGRNEEAIAAYDKAIEINSQYAKAWNNKGATLGK 341

Query: 175 RGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEAL 234
            G+Y +++  + +A+++ P C  A     G     LG+  +A  A  +A++++ +   A 
Sbjct: 342 LGKYEEAIAAFNKAIEIKPQCAEAWN-NKGAALRDLGRYEEAIAAHDKAIEINSQYARAW 400

Query: 235 --VALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTE 292
               +A+ DL  NE A     +    +A EI P  A A N         G++       +
Sbjct: 401 NNKGVALCDLGRNEEA-----IAAYDKAIEINPQFAGAWNNKGAALGKLGRYEEAIAACD 455

Query: 293 TALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQ 352
            A+ +    P  + ++ N   +    G YE+A     A  K I    ++   +   G   
Sbjct: 456 KAIEIN---PQFAEAWNNKGAALGKLGRYEEA---IAACDKAIETNPQYAEAWNNKGLAL 509

Query: 353 LKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQA 412
             LG +  A+   +K +EI           G     LG+ E+A      A +I+PRDA+A
Sbjct: 510 SGLGKYEEAIAAHDKAIEINSQYAGAWTNKGIALCHLGRYEEAIAACDNAIEINPRDAEA 569

Query: 413 FIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEV-------LNNIGVIHFEKGEFE 465
           + + G  L      + L  ++ A     KA     IE+        NN GV     G +E
Sbjct: 570 WNNKGVAL------SGLGKYEEAIAAHDKA-----IEINSQYAGAWNNKGVALRGLGRYE 618

Query: 466 SAHQSFKDAL 475
            A  ++ +A+
Sbjct: 619 EAIAAYDEAV 628



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 70/293 (23%), Positives = 122/293 (41%), Gaps = 16/293 (5%)

Query: 118 NKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGR 177
           +KA  I+      W  KG  L   G  E+A +A    +E +     A   +       G+
Sbjct: 455 DKAIEINPQFAEAWNNKGAALGKLGRYEEAIAACDKAIETNPQYAEAWNNKGLALSGLGK 514

Query: 178 YSDSLEFYKRALQVHPSCPGA-IRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEAL-- 234
           Y +++  + +A++++    GA    GI LC   LG+  +A  A   A++++P + EA   
Sbjct: 515 YEEAIAAHDKAIEINSQYAGAWTNKGIALCH--LGRYEEAIAACDNAIEINPRDAEAWNN 572

Query: 235 VALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETA 294
             +A+  L   E A     +    +A EI    A A N         G++       + A
Sbjct: 573 KGVALSGLGKYEEA-----IAAHDKAIEINSQYAGAWNNKGVALRGLGRYEEAIAAYDEA 627

Query: 295 LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLK 354
           + +    P  + ++ N   +    G YE A   Y  ++ EIN   ++   +   G     
Sbjct: 628 VEIN---PQYAEAWNNKGIALCHLGKYEGAIAAYDNAI-EINP--QYADAWTNKGVALSD 681

Query: 355 LGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 407
           LG +  A+  ++  +EI P   E     G +    G+ E+A+E   KA +IDP
Sbjct: 682 LGRYEEAIAAYDNAIEINPQLAEAWNNKGVVLGWSGRYEEAKEAFEKAHEIDP 734



 Score = 47.0 bits (110), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 70/303 (23%), Positives = 121/303 (39%), Gaps = 31/303 (10%)

Query: 173 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 232
           + +  ++ ++ F+  A + + +C   +   I  C Y    L K+ Q   +A+++DP+  +
Sbjct: 239 YKKSNFTSAITFFTSA-KDYENCSSTLCY-IASCYYFNSNLNKSLQYLDKAVEIDPQYAQ 296

Query: 233 AL--VALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQL 290
                 + +  L  NE A     +    +A EI    A A N         G++      
Sbjct: 297 IWNNKGIVLGKLGRNEEA-----IAAYDKAIEINSQYAKAWNNKGATLGKLGKY------ 345

Query: 291 TETALAVTNHG----PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYY 346
            E A+A  N      P  + ++ N   +    G YE+A     A  K I    ++   + 
Sbjct: 346 -EEAIAAFNKAIEIKPQCAEAWNNKGAALRDLGRYEEA---IAAHDKAIEINSQYARAWN 401

Query: 347 GLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKID 406
             G     LG    A+  ++K +EI P         G    +LG+ E+A     KA +I+
Sbjct: 402 NKGVALCDLGRNEEAIAAYDKAIEINPQFAGAWNNKGAALGKLGRYEEAIAACDKAIEIN 461

Query: 407 PRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEF 464
           P+ A+A+ + G  L        L  ++ A     KA E  P   E  NN G+     G++
Sbjct: 462 PQFAEAWNNKGAAL------GKLGRYEEAIAACDKAIETNPQYAEAWNNKGLALSGLGKY 515

Query: 465 ESA 467
           E A
Sbjct: 516 EEA 518



 Score = 43.9 bits (102), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 28/112 (25%), Positives = 54/112 (48%), Gaps = 1/112 (0%)

Query: 117 YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 176
           Y++A  I+      W  KG  L   G+ E A +A+   +E +     A   +     + G
Sbjct: 624 YDEAVEINPQYAEAWNNKGIALCHLGKYEGAIAAYDNAIEINPQYADAWTNKGVALSDLG 683

Query: 177 RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDP 228
           RY +++  Y  A++++P    A     G+     G+  +A++AF++A ++DP
Sbjct: 684 RYEEAIAAYDNAIEINPQLAEAWN-NKGVVLGWSGRYEEAKEAFEKAHEIDP 734


>gi|148654849|ref|YP_001275054.1| hypothetical protein RoseRS_0687 [Roseiflexus sp. RS-1]
 gi|148566959|gb|ABQ89104.1| Tetratricopeptide TPR_2 repeat protein [Roseiflexus sp. RS-1]
          Length = 2262

 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 94/374 (25%), Positives = 155/374 (41%), Gaps = 67/374 (17%)

Query: 47   AREYFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREK 106
            AR   +QG+  + RQ+ EE    E   +    RYE   +L                   +
Sbjct: 1938 ARLLIRQGRTAEARQVFEEAVKRE--PHQGAWRYELAELL-------------------R 1976

Query: 107  EEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALL 166
            ++  + A ++Y  A ++   EP  W+G  + L+A+ E + A    +  L    DN PAL 
Sbjct: 1977 QQGDLTAIEHYAAAVQLAPDEPRHWLGLVEGLIARHERDAARETVERALLRFGDN-PALH 2035

Query: 167  GQACVEFN-RGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 225
              A   +  +G    +   Y RA +  P   G      G  + +LG+L  AR+  +RAL 
Sbjct: 2036 SAAGAIYEAQGDIERAAWHYGRAFERDPQNAGNC-WRFGRAQLELGRLDAARELLERALA 2094

Query: 226  LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 285
            LDP++ +A  A+A      N++   R  +   QRA E+ P          +   F  Q  
Sbjct: 2095 LDPDSADAHAAIARFFAHTNDS---RAALIHSQRAAELRP----------DEPAFQIQ-- 2139

Query: 286  LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 345
            L E LT                  +L R   ++   E+A       ++ I    E +  Y
Sbjct: 2140 LAEALT------------------HLRRFDEARQALERA-------LQRIPDNPELLARY 2174

Query: 346  YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKI 405
               G++ L +G +  AL+ FE+ +   PD        G ++ +L Q  +A E  R+A K+
Sbjct: 2175 ---GEMALTVGLYHEALSAFERAIAQRPDEPRYHFLAGRVHRRLKQYSRAIERFRRAVKL 2231

Query: 406  DPRDAQAFIDLGEL 419
             P  ++A I+L  L
Sbjct: 2232 RPGYSEAVIELSTL 2245



 Score = 48.1 bits (113), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 79/349 (22%), Positives = 139/349 (39%), Gaps = 35/349 (10%)

Query: 137  LLLAKGEVEQASSAF--KIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS 194
            L  A G  ++A +A    + L+ D     A +G+ C +   G    +   Y RA+Q+ P 
Sbjct: 1872 LYAASGRFQEARAALINALTLQPDVAAWHAQMGEICQQM--GLIDAARSAYARAIQLAPD 1929

Query: 195  CPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGM 254
                 R        + G+  +ARQ F+ A++ +P        LA +  Q  +   I    
Sbjct: 1930 N-ADYRHAQARLLIRQGRTAEARQVFEEAVKREPHQGAWRYELAELLRQQGDLTAI---- 1984

Query: 255  EKMQRAFEIYP-----YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYY 309
            E    A ++ P     +  +    +A H     +     +  E AL      P    +  
Sbjct: 1985 EHYAAAVQLAPDEPRHWLGLVEGLIARH-----ERDAARETVERALLRFGDNPALHSAAG 2039

Query: 310  NLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVL 369
             +   Y ++GD E+A  +Y    +   +  +     +  G+ QL+LG   +A    E+ L
Sbjct: 2040 AI---YEAQGDIERAAWHYG---RAFERDPQNAGNCWRFGRAQLELGRLDAARELLERAL 2093

Query: 370  EIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAF-IDLGELLISSDTGAA 428
             + PD+ +   A+   +        A    ++AA++ P D  AF I L E L        
Sbjct: 2094 ALDPDSADAHAAIARFFAHTNDSRAALIHSQRAAELRP-DEPAFQIQLAEALTH------ 2146

Query: 429  LDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDAL 475
            L  F  AR  L++A + +P   E+L   G +    G +  A  +F+ A+
Sbjct: 2147 LRRFDEARQALERALQRIPDNPELLARYGEMALTVGLYHEALSAFERAI 2195



 Score = 43.5 bits (101), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 38/74 (51%)

Query: 348  LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 407
            L  V L  G    AL    +V+   PD     +A  H  + +GQ EKA+  L +A + DP
Sbjct: 1321 LALVHLARGWHGEALAELNQVIATTPDLPGAWRARAHALLAIGQHEKARADLVEALRRDP 1380

Query: 408  RDAQAFIDLGELLI 421
            RDA+++  L E L+
Sbjct: 1381 RDAESYTLLAETLL 1394



 Score = 43.1 bits (100), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 74/331 (22%), Positives = 119/331 (35%), Gaps = 76/331 (22%)

Query: 176 GRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV 235
           GR  +++E Y RA+ +    P ++   +G  R+  G L  AR A QRA++LDP +     
Sbjct: 641 GRCVEAIESYARAVALRSDDP-SLYARLGQLRHSAGDLPGARAALQRAVELDPSD----- 694

Query: 236 ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETAL 295
                       AG+   +       +I+  C    N LA +                  
Sbjct: 695 ------------AGLHDEL------GQIFEACGETGNALAAYR----------------- 719

Query: 296 AVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKL 355
           A  +  P     +  L       GD + A      +++      E    Y  L ++  + 
Sbjct: 720 AAVSLDPQCDAYHRRLGALLRDCGDDDGAAAALRTALELRPDSAET---YGELAELLWRS 776

Query: 356 GDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFID 415
           G+   AL    +   + P + +  +ALG  Y ++G+   A+  LR A  + P  A    D
Sbjct: 777 GESEKALDACRRAYALAPTSPDHARALGLAYHRVGRARDAERTLRDALALAPDRADLHFD 836

Query: 416 LGELLISSD-------------------------TGAAL---DAFKTARTLLKKA---GE 444
            G +  S +                          GA L      K ARTLL  A     
Sbjct: 837 YGMVAESIEQWDAALAAYERAAMLAPQRADYARAAGALLLRRGELKRARTLLAGALRRAR 896

Query: 445 EVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
             P E L   G++H   G +  A +SF+ A+
Sbjct: 897 RDP-ETLFQTGLLHVAAGAWHLAARSFQRAV 926



 Score = 41.6 bits (96), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 26/95 (27%), Positives = 48/95 (50%), Gaps = 1/95 (1%)

Query: 345 YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAK 404
           Y  LG+V    G    A+ ++ + + +  D+      LG +    G +  A+  L++A +
Sbjct: 630 YAELGEVYADAGRCVEAIESYARAVALRSDDPSLYARLGQLRHSAGDLPGARAALQRAVE 689

Query: 405 IDPRDAQAFIDLGELL-ISSDTGAALDAFKTARTL 438
           +DP DA    +LG++     +TG AL A++ A +L
Sbjct: 690 LDPSDAGLHDELGQIFEACGETGNALAAYRAAVSL 724



 Score = 40.8 bits (94), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 73/308 (23%), Positives = 122/308 (39%), Gaps = 25/308 (8%)

Query: 142 GEVEQASSAFKIVLEADRDNVPAL---LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGA 198
           GE++QA++A + VL+  +  + A    LG   V   +GR+  +LE Y+ A Q  P  P A
Sbjct: 538 GELDQAAAALEAVLDTQQKRLAAAAHELGH--VYLQQGRFVHALEAYRHAAQQQPGDP-A 594

Query: 199 IRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQ 258
            R  +     +L ++ +A    +    L  E+       A +     +A    + +E   
Sbjct: 595 YRRSVATALRRLKRIDEAEAQLR---SLIAESGGDAATYAELGEVYADAGRCVEAIESYA 651

Query: 259 RAFEIY---PYCAMALNYLANHFF-FTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARS 314
           RA  +    P     L  L +      G    +++  E         P+ +  +  L + 
Sbjct: 652 RAVALRSDDPSLYARLGQLRHSAGDLPGARAALQRAVEL-------DPSDAGLHDELGQI 704

Query: 315 YHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPD 374
           + + G+   A   Y A+V    +   +   +  LG +    GD   A       LE+ PD
Sbjct: 705 FEACGETGNALAAYRAAVSLDPQCDAY---HRRLGALLRDCGDDDGAAAALRTALELRPD 761

Query: 375 NCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKT 434
           + ET   L  +  + G+ EKA +  R+A  + P        LG  L     G A DA +T
Sbjct: 762 SAETYGELAELLWRSGESEKALDACRRAYALAPTSPDHARALG--LAYHRVGRARDAERT 819

Query: 435 ARTLLKKA 442
            R  L  A
Sbjct: 820 LRDALALA 827


>gi|386000858|ref|YP_005919157.1| hypothetical protein Mhar_0143 [Methanosaeta harundinacea 6Ac]
 gi|357208914|gb|AET63534.1| TPR repeat-containing protein [Methanosaeta harundinacea 6Ac]
          Length = 609

 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 72/334 (21%), Positives = 141/334 (42%), Gaps = 38/334 (11%)

Query: 118 NKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGR 177
           +KA  +D  + + W  KG+ L  KG   +A  AF   +  D +   A   +  V  ++G+
Sbjct: 251 DKAIELDPEDAAPWNNKGKPLWMKGNYTEAIQAFDEAIRLDPELAVAWSNKGTVLADQGK 310

Query: 178 YSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPEN------- 230
           Y ++++ Y  A+++HP+   A  +  G   Y+ G   +A QA+  A++LDP+N       
Sbjct: 311 YDEAIQAYDEAIRLHPNYVDAW-INKGSALYEQGNYPEAIQAYDEAIRLDPDNAMTWYNK 369

Query: 231 ----------VEALVAL-AVMDLQANEA-AGIRKG------------MEKMQRAFEIYPY 266
                      E ++A    + L   EA   + KG            ++    A  + P 
Sbjct: 370 GNALSELGNYTEGILAYDEAIRLDPEEADVWVSKGNSFRMQGKYDEAIQAYDEAIRLDPE 429

Query: 267 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGL 326
            A       N F   G++    Q  + A+ +    P ++  + +   S+  +G Y++A  
Sbjct: 430 EADVWVSKGNSFRMQGKYDEAIQAYDEAIRLD---PEEADVWVSKGNSFRMQGKYDEAIQ 486

Query: 327 YYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIY 386
            Y  +++      EF   +Y  G    +   +  A+  +++ + + PD  E     G+  
Sbjct: 487 AYDEAIR---LDPEFAGAWYNKGNALYEQDKYDEAIQAYDEAIRLNPDYKEAWNNKGNAL 543

Query: 387 VQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 420
           V  G+ ++A +   +A ++DP  A  +   G +L
Sbjct: 544 VMQGKYDEAIQAYDEAIRLDPEFAYPWFSKGVVL 577



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 62/309 (20%), Positives = 132/309 (42%), Gaps = 10/309 (3%)

Query: 109 HFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQ 168
           ++  AT+ +++A R+D      W  KG+ L  +G    A  A+   +  D +   A   +
Sbjct: 106 NYTEATRCFDEAIRLDPEYAGAWYNKGKALSERGNYTGAILAYDEAIRLDPELAAAWHKK 165

Query: 169 ACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDP 228
               F RG Y+++++ +  A+++ P          G+     G   +A  A+  A++LDP
Sbjct: 166 GDALFERGNYTEAIQAFDEAIRLDPED-ATTWYNKGVALGMQGNYAEAIPAYDEAIRLDP 224

Query: 229 ENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVE 288
           E+ +A           NE     + +  + +A E+ P  A   N      +  G +    
Sbjct: 225 EDADAWNNRGNA---LNELGKYDEAIHALDKAIELDPEDAAPWNNKGKPLWMKGNYTEAI 281

Query: 289 QLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGL 348
           Q  + A+ +    P  + ++ N       +G Y++A   Y  +++    P+ ++  +   
Sbjct: 282 QAFDEAIRLD---PELAVAWSNKGTVLADQGKYDEAIQAYDEAIRL--HPN-YVDAWINK 335

Query: 349 GQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPR 408
           G    + G++  A+  +++ + + PDN  T    G+   +LG   +      +A ++DP 
Sbjct: 336 GSALYEQGNYPEAIQAYDEAIRLDPDNAMTWYNKGNALSELGNYTEGILAYDEAIRLDPE 395

Query: 409 DAQAFIDLG 417
           +A  ++  G
Sbjct: 396 EADVWVSKG 404



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 78/371 (21%), Positives = 152/371 (40%), Gaps = 22/371 (5%)

Query: 109 HFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQ 168
           ++ +A + +++A R+D      W  KG  L  +G   +A  A+   +  D +   A   +
Sbjct: 4   NYTMAIEAFDEAIRLDPEYADAWYSKGLTLYYRGNYTEAVQAYDEAIRLDPEYASAWNNK 63

Query: 169 ACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDP 228
                 +G Y +S++ Y  A+++ P    A     G+     G   +A + F  A++LDP
Sbjct: 64  GLALDYQGNYDESIKAYDEAIRLDPEFAAAWN-NKGIALGNQGNYTEATRCFDEAIRLDP 122

Query: 229 ENVEALVALA-VMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLV 287
           E   A       +  + N    I         A  + P  A A +   +  F  G +   
Sbjct: 123 EYAGAWYNKGKALSERGNYTGAIL----AYDEAIRLDPELAAAWHKKGDALFERGNYTEA 178

Query: 288 EQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYG 347
            Q  + A+ +    P  + ++YN   +   +G+Y +A   Y  +++      E    +  
Sbjct: 179 IQAFDEAIRLD---PEDATTWYNKGVALGMQGNYAEAIPAYDEAIR---LDPEDADAWNN 232

Query: 348 LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 407
            G    +LG +  A+   +K +E+ P++       G      G   +A +   +A ++DP
Sbjct: 233 RGNALNELGKYDEAIHALDKAIELDPEDAAPWNNKGKPLWMKGNYTEAIQAFDEAIRLDP 292

Query: 408 RDAQAFIDLGELLISSDTGA---ALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEF 464
             A A+ + G +L  +D G    A+ A+  A  L         ++   N G   +E+G +
Sbjct: 293 ELAVAWSNKGTVL--ADQGKYDEAIQAYDEAIRLHPNY-----VDAWINKGSALYEQGNY 345

Query: 465 ESAHQSFKDAL 475
             A Q++ +A+
Sbjct: 346 PEAIQAYDEAI 356



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 82/401 (20%), Positives = 157/401 (39%), Gaps = 48/401 (11%)

Query: 109 HFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQ 168
           ++  A Q Y++A R+D    S W  KG  L  +G  +++  A+   +  D +   A   +
Sbjct: 38  NYTEAVQAYDEAIRLDPEYASAWNNKGLALDYQGNYDESIKAYDEAIRLDPEFAAAWNNK 97

Query: 169 ACVEFNRGRYSDSLEFYKRALQVHPSCPG------------------------AIRLGI- 203
                N+G Y+++   +  A+++ P   G                        AIRL   
Sbjct: 98  GIALGNQGNYTEATRCFDEAIRLDPEYAGAWYNKGKALSERGNYTGAILAYDEAIRLDPE 157

Query: 204 --------GLCRYKLGQLGKARQAFQRALQLDPENVEALVALAV-MDLQANEAAGIRKGM 254
                   G   ++ G   +A QAF  A++LDPE+        V + +Q N A  I    
Sbjct: 158 LAAAWHKKGDALFERGNYTEAIQAFDEAIRLDPEDATTWYNKGVALGMQGNYAEAI---- 213

Query: 255 EKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARS 314
                A  + P  A A N   N     G++       + A+ +    P  +  + N  + 
Sbjct: 214 PAYDEAIRLDPEDADAWNNRGNALNELGKYDEAIHALDKAIELD---PEDAAPWNNKGKP 270

Query: 315 YHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPD 374
              KG+Y +A     A  + I    E    +   G V    G +  A+  +++ + ++P+
Sbjct: 271 LWMKGNYTEA---IQAFDEAIRLDPELAVAWSNKGTVLADQGKYDEAIQAYDEAIRLHPN 327

Query: 375 NCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKT 434
             +     G    + G   +A +   +A ++DP +A  + + G  L  S+ G   +    
Sbjct: 328 YVDAWINKGSALYEQGNYPEAIQAYDEAIRLDPDNAMTWYNKGNAL--SELGNYTEGILA 385

Query: 435 ARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
               ++   EE  + V  + G     +G+++ A Q++ +A+
Sbjct: 386 YDEAIRLDPEEADVWV--SKGNSFRMQGKYDEAIQAYDEAI 424



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 32/122 (26%), Positives = 61/122 (50%), Gaps = 1/122 (0%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
           A Q Y++A R+D  E   WV KG     +G+ ++A  A+   +  D +     + +    
Sbjct: 416 AIQAYDEAIRLDPEEADVWVSKGNSFRMQGKYDEAIQAYDEAIRLDPEEADVWVSKGNSF 475

Query: 173 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 232
             +G+Y ++++ Y  A+++ P   GA     G   Y+  +  +A QA+  A++L+P+  E
Sbjct: 476 RMQGKYDEAIQAYDEAIRLDPEFAGAW-YNKGNALYEQDKYDEAIQAYDEAIRLNPDYKE 534

Query: 233 AL 234
           A 
Sbjct: 535 AW 536



 Score = 46.6 bits (109), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 62/299 (20%), Positives = 113/299 (37%), Gaps = 47/299 (15%)

Query: 211 GQLGKARQAFQRALQLDPENVEALVALAV-MDLQANEAAGIRKGMEKMQRAFEIYPYCAM 269
           G    A +AF  A++LDPE  +A  +  + +  + N      + ++    A  + P  A 
Sbjct: 3   GNYTMAIEAFDEAIRLDPEYADAWYSKGLTLYYRGN----YTEAVQAYDEAIRLDPEYAS 58

Query: 270 ALNYLANHFFFTGQHF---------------LVEQLTETALAVTNHG------------- 301
           A N       + G +                         +A+ N G             
Sbjct: 59  AWNNKGLALDYQGNYDESIKAYDEAIRLDPEFAAAWNNKGIALGNQGNYTEATRCFDEAI 118

Query: 302 ---PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDF 358
              P  + ++YN  ++   +G+Y  A L Y  +++      E    ++  G    + G++
Sbjct: 119 RLDPEYAGAWYNKGKALSERGNYTGAILAYDEAIR---LDPELAAAWHKKGDALFERGNY 175

Query: 359 RSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGE 418
             A+  F++ + + P++  T    G      G   +A     +A ++DP DA A+ + G 
Sbjct: 176 TEAIQAFDEAIRLDPEDATTWYNKGVALGMQGNYAEAIPAYDEAIRLDPEDADAWNNRGN 235

Query: 419 LLISSDTGAALDAFKTARTLLKKAGEEVPIEV--LNNIGVIHFEKGEFESAHQSFKDAL 475
            L        L  +  A   L KA E  P +    NN G   + KG +  A Q+F +A+
Sbjct: 236 ALNE------LGKYDEAIHALDKAIELDPEDAAPWNNKGKPLWMKGNYTEAIQAFDEAI 288


>gi|423064372|ref|ZP_17053162.1| tetratricopeptide TPR_2 [Arthrospira platensis C1]
 gi|406713615|gb|EKD08783.1| tetratricopeptide TPR_2 [Arthrospira platensis C1]
          Length = 608

 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 75/327 (22%), Positives = 144/327 (44%), Gaps = 42/327 (12%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDN----------- 161
           A + Y++A +I  +  S W+ KG LL+ + +   A+ +++  LE + +N           
Sbjct: 98  AIKSYDQAIKIKPNSDSLWIEKGDLLVQQNQTRLAADSYQRALEINPNNHQVSQKLEGLL 157

Query: 162 ------VPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGK 215
                    LL +    +  G    SLE Y + +++ P+   A   G G+    LG+  +
Sbjct: 158 NQLQELAENLLTEGNHLYEAGEVERSLELYNQVVELQPNQDSAW-YGRGVALADLGRNEE 216

Query: 216 ARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLA 275
           A  +F +AL+++PE  +  + ++  ++   +    +  +    RA  I P          
Sbjct: 217 AIASFDKALEINPEPEDDGIWISRGNVLV-KLNKYKDAITSFDRALAINP---------N 266

Query: 276 NHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEI 335
           +      +  L+ QL + A            + ++ A   +  G+ E++ L     + EI
Sbjct: 267 DQQVSQKREDLLNQLNQLA-----------DNLFDQAMGLYGAGEMERS-LELFNQLVEI 314

Query: 336 NKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKA 395
            KP  F F +Y  G     LG F  A+T+++K L + P +     + G+  + LG  E+A
Sbjct: 315 -KPDNF-FMWYLRGLALASLGRFEEAITSYDKTLAVDPSDDSAWYSRGNALMNLGGHEEA 372

Query: 396 QELLRKAAKIDPRDAQAFIDLGELLIS 422
            +  +KA +I+P   +A+ +LG  L S
Sbjct: 373 VQSYQKALEINPDHHEAWHNLGGALTS 399



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 81/311 (26%), Positives = 129/311 (41%), Gaps = 60/311 (19%)

Query: 110 FILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPAL--LG 167
           F  A   Y+K   +D  + S W  +G  L+  G  E+A  +++  LE + D+  A   LG
Sbjct: 335 FEEAITSYDKTLAVDPSDDSAWYSRGNALMNLGGHEEAVQSYQKALEINPDHHEAWHNLG 394

Query: 168 QACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLD 227
            A      GRY +++  Y ++L V  S      L  G     LG+  +A  ++++AL+++
Sbjct: 395 GALTSL--GRYQEAIVCYDKSL-VANSEQDRSWLDKGSALLNLGRYEEAFASYEKALEVN 451

Query: 228 PENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLV 287
           P N  A  ALA          GI   + + Q+A   Y                       
Sbjct: 452 PSNDLAWTALA----------GILADLREYQKALTFY----------------------- 478

Query: 288 EQLTETALAV-TNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFP-- 344
               E AL++ +N+G T    +YNL  +    G +EKA   Y  ++        FI P  
Sbjct: 479 ----EKALSINSNNGLT----WYNLGNTLIDLGSHEKAVQCYENAL--------FINPDD 522

Query: 345 ---YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRK 401
              +Y LG     L  +  A+ +++K L I PD  E     G+     G+ E+A     K
Sbjct: 523 EQAWYNLGNALAVLKRYGEAVKSYDKALAIKPDKHEAWFNRGNALDDWGRYEEAIASFDK 582

Query: 402 AAKIDPRDAQA 412
           A  I+P +  A
Sbjct: 583 ALAINPHNEAA 593



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 92/386 (23%), Positives = 163/386 (42%), Gaps = 41/386 (10%)

Query: 113 ATQYYNKASRIDMHEP---STWVGKGQLLLAKGEVEQASSAFKIVLEADRDN-------- 161
           A   ++KA  I+  EP     W+ +G +L+   + + A ++F   L  + ++        
Sbjct: 217 AIASFDKALEIN-PEPEDDGIWISRGNVLVKLNKYKDAITSFDRALAINPNDQQVSQKRE 275

Query: 162 ---------VPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQ 212
                       L  QA   +  G    SLE + + +++ P       L  GL    LG+
Sbjct: 276 DLLNQLNQLADNLFDQAMGLYGAGEMERSLELFNQLVEIKPDNFFMWYLR-GLALASLGR 334

Query: 213 LGKARQAFQRALQLDPENVEALVAL--AVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 270
             +A  ++ + L +DP +  A  +   A+M+L  +E A     ++  Q+A EI P    A
Sbjct: 335 FEEAITSYDKTLAVDPSDDSAWYSRGNALMNLGGHEEA-----VQSYQKALEINPDHHEA 389

Query: 271 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 330
            + L       G++       + +L   +    +  S+ +   +  + G YE+A   Y  
Sbjct: 390 WHNLGGALTSLGRYQEAIVCYDKSLVANSE---QDRSWLDKGSALLNLGRYEEAFASYEK 446

Query: 331 SVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLG 390
           ++ E+N  ++    +  L  +   L +++ ALT +EK L I  +N  T   LG+  + LG
Sbjct: 447 AL-EVNPSNDL--AWTALAGILADLREYQKALTFYEKALSINSNNGLTWYNLGNTLIDLG 503

Query: 391 QIEKAQELLRKAAKIDPRDAQAFIDLGE-LLISSDTGAALDAFKTARTLLKKAGEEVPIE 449
             EKA +    A  I+P D QA+ +LG  L +    G A+ ++  A  +          E
Sbjct: 504 SHEKAVQCYENALFINPDDEQAWYNLGNALAVLKRYGEAVKSYDKALAIKPDKH-----E 558

Query: 450 VLNNIGVIHFEKGEFESAHQSFKDAL 475
              N G    + G +E A  SF  AL
Sbjct: 559 AWFNRGNALDDWGRYEEAIASFDKAL 584


>gi|88603649|ref|YP_503827.1| tetratricopeptide TPR_2 [Methanospirillum hungatei JF-1]
 gi|88189111|gb|ABD42108.1| Tetratricopeptide TPR_2 [Methanospirillum hungatei JF-1]
          Length = 436

 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 60/235 (25%), Positives = 110/235 (46%), Gaps = 11/235 (4%)

Query: 177 RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV- 235
           +Y  +++ + R +++  S PG   +G+G     LG+  +A   F RAL +DPEN EAL  
Sbjct: 30  KYEAAVQTFNRGIELDRSHPGCW-VGMGKAFLGLGRYDRADDCFIRALDIDPENPEALTM 88

Query: 236 ---ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTE 292
               L ++ LQ  +     + +E   +  +I+P    AL+      +  G+      L E
Sbjct: 89  RASVLRLIALQNQDPMRCLEAVEICNKTLKIHPEYGPALHEKGMALWTLGKRDEAMSLFE 148

Query: 293 TALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQ 352
            A  +    P   + +    R    K  Y +A   Y  ++++  +  + +F    +G+  
Sbjct: 149 QAKKIHASYP---YPWDLKGRYLFEKRQYHEAIEAYEEALEKKPQDPDLLF---SMGRAL 202

Query: 353 LKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 407
           +K+G + SA+  F+K L+I PD       LG+ Y  L Q ++A +   +A ++DP
Sbjct: 203 MKIGGYHSAIQFFKKCLKIRPDYTAAWLLLGNSYKVLNQFDEAIDAYEEAMELDP 257



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 80/368 (21%), Positives = 147/368 (39%), Gaps = 63/368 (17%)

Query: 107 EEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALL 166
           +E +  A Q +N+   +D   P  WVG G+  L  G  ++A   F   L+ D +N  AL 
Sbjct: 28  KEKYEAAVQTFNRGIELDRSHPGCWVGMGKAFLGLGRYDRADDCFIRALDIDPENPEALT 87

Query: 167 GQA---------------CVE--------------------------FNRGRYSDSLEFY 185
            +A               C+E                          +  G+  +++  +
Sbjct: 88  MRASVLRLIALQNQDPMRCLEAVEICNKTLKIHPEYGPALHEKGMALWTLGKRDEAMSLF 147

Query: 186 KRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVAL--AVMDLQ 243
           ++A ++H S P    L  G   ++  Q  +A +A++ AL+  P++ + L ++  A+M + 
Sbjct: 148 EQAKKIHASYPYPWDLK-GRYLFEKRQYHEAIEAYEEALEKKPQDPDLLFSMGRALMKI- 205

Query: 244 ANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPT 303
                G    ++  ++  +I P    A   L N +    Q        E A+ + + G T
Sbjct: 206 ----GGYHSAIQFFKKCLKIRPDYTAAWLLLGNSYKVLNQFDEAIDAYEEAMEL-DPGST 260

Query: 304 KSHSYYNLARSY--------HSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKL 355
           K   Y  +A  Y        + +G  ++A  Y+  +++ I      I  ++  G    KL
Sbjct: 261 KYRKY--IADVYLVMGKEALYKEGKPQEAIEYFDKTIRMIAN---HITAWFSKGVAYKKL 315

Query: 356 GDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFID 415
           G +R+A   F KV+E+ P N      +  I  + G  E+A     +  + DP    A   
Sbjct: 316 GAYRNATACFLKVVEMDPQNGHAYYEMAQILEKTGNNEEAIRCYLETIRCDPSHTDAMYK 375

Query: 416 LGELLISS 423
           +G LL+  
Sbjct: 376 VGNLLMEG 383



 Score = 43.9 bits (102), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 55/251 (21%), Positives = 100/251 (39%), Gaps = 16/251 (6%)

Query: 344 PYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAA 403
           PY   G+ QL    + +A+  F + +E+   +      +G  ++ LG+ ++A +   +A 
Sbjct: 17  PYCQKGETQLVKEKYEAAVQTFNRGIELDRSHPGCWVGMGKAFLGLGRYDRADDCFIRAL 76

Query: 404 KIDPRDAQAFIDLGELLI-----SSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIH 458
            IDP + +A      +L      + D    L+A +     LK   E  P   L+  G+  
Sbjct: 77  DIDPENPEALTMRASVLRLIALQNQDPMRCLEAVEICNKTLKIHPEYGP--ALHEKGMAL 134

Query: 459 FEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHV 518
           +  G+ + A   F+ A             +  Y  D     L F+  Q     E     +
Sbjct: 135 WTLGKRDEAMSLFEQAKK--------IHASYPYPWDLKGRYL-FEKRQYHEAIEAYEEAL 185

Query: 519 ELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLS 578
           E       +LF++ R L +I    +A   ++  L    DY  A+L L    K  N    +
Sbjct: 186 EKKPQDPDLLFSMGRALMKIGGYHSAIQFFKKCLKIRPDYTAAWLLLGNSYKVLNQFDEA 245

Query: 579 IELVNEALKVN 589
           I+   EA++++
Sbjct: 246 IDAYEEAMELD 256


>gi|255528197|ref|ZP_05395020.1| Tetratricopeptide TPR_2 repeat protein [Clostridium carboxidivorans
           P7]
 gi|296184633|ref|ZP_06853044.1| tetratricopeptide repeat protein [Clostridium carboxidivorans P7]
 gi|255508112|gb|EET84529.1| Tetratricopeptide TPR_2 repeat protein [Clostridium carboxidivorans
           P7]
 gi|296050415|gb|EFG89838.1| tetratricopeptide repeat protein [Clostridium carboxidivorans P7]
          Length = 698

 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 80/318 (25%), Positives = 140/318 (44%), Gaps = 14/318 (4%)

Query: 107 EEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRD--NVPA 164
           E+ F  A   Y KA  +D +    +   G   +   E E A  +++ VL+ D D  +V +
Sbjct: 229 EKKFKSAKINYLKAIELDSNNILAYYNLGNTQVILNEYEDAKKSYEKVLKLDSDHKDVHS 288

Query: 165 LLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRAL 224
            LG    +     Y D+ + Y + ++++P    A   G+ L   +L +  +A    ++ +
Sbjct: 289 NLGNIYSDL--KLYDDAKKMYNKEIELYPESVNA-YYGLALLYEELEEFKEALDIIEKII 345

Query: 225 QLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQH 284
            +DP +  A   +A  ++Q N         ++ + A  I P    A N      +   ++
Sbjct: 346 VIDPNDYNAYKMIA--NIQVN-MRNYDIAEKQYKNAININPNYGDAYNDYGVLLYKLKRY 402

Query: 285 FLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFP 344
              ++L + A+ +    P +   Y NLA S +  G   +A   Y  +++      E    
Sbjct: 403 EESKELCKKAIDL---NPYECIYYNNLANSLNELGLLGEAMQVYETAIRFNPNNSEL--- 456

Query: 345 YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAK 404
           Y  L     K  +   A+ N+EK +E+ P   E    LG IY++L   +KA   ++KA K
Sbjct: 457 YCNLATALQKSNNIEDAIKNYEKSIELNPKLAEAYNNLGSIYIELEDYKKATNYIKKAIK 516

Query: 405 IDPRDAQAFIDLGELLIS 422
           ID   AQAF +LG +L S
Sbjct: 517 IDKNLAQAFFNLGNVLFS 534



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 65/272 (23%), Positives = 119/272 (43%), Gaps = 18/272 (6%)

Query: 177 RYSDSLEFYKRALQVHP-SCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV 235
           RY +S E  K+A+ ++P  C     L   L   +LG LG+A Q ++ A++ +P N E   
Sbjct: 401 RYEESKELCKKAIDLNPYECIYYNNLANSLN--ELGLLGEAMQVYETAIRFNPNNSELYC 458

Query: 236 ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETAL 295
            LA    ++N    I   ++  +++ E+ P  A A N L + +     +       + A+
Sbjct: 459 NLATALQKSN---NIEDAIKNYEKSIELNPKLAEAYNNLGSIYIELEDYKKATNYIKKAI 515

Query: 296 AVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKL 355
            +       + +++NL     S G Y ++   Y   +K  N   E    Y+ LG    +L
Sbjct: 516 KI---DKNLAQAFFNLGNVLFSLGRYSESVQAYKKYIKLDNSNFEV---YFKLGNALYEL 569

Query: 356 GDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFID 415
            +F+ A+  + K +EI  +   +   L + +     I +A +   K   IDP   +A+ +
Sbjct: 570 KEFKKAIDMYLKSIEINSNYTHSNFNLANTFYTTNNINEAIKYYEKVISIDPLYIEAYNN 629

Query: 416 LGELLISSDTGAALDAFKTARTLLKKAGEEVP 447
           LG +        AL  +K A+   + A +  P
Sbjct: 630 LGTMF------CALKDYKKAKGCYQIAIKNNP 655



 Score = 47.8 bits (112), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 97/495 (19%), Positives = 195/495 (39%), Gaps = 69/495 (13%)

Query: 131 WVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQ 190
           ++ KG  L  + + + A   +   +E D +N+ A       +     Y D+ + Y++ L+
Sbjct: 219 YLYKGIFLYEEKKFKSAKINYLKAIELDSNNILAYYNLGNTQVILNEYEDAKKSYEKVLK 278

Query: 191 VHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGI 250
           +  S    +   +G     L     A++ + + ++L PE+V A   LA+      E    
Sbjct: 279 LD-SDHKDVHSNLGNIYSDLKLYDDAKKMYNKEIELYPESVNAYYGLAL---LYEELEEF 334

Query: 251 RKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSY-- 308
           ++ ++ +++   I P    A   +AN       + + E+  + A+ +  +     + Y  
Sbjct: 335 KEALDIIEKIIVIDPNDYNAYKMIANIQVNMRNYDIAEKQYKNAININPNYGDAYNDYGV 394

Query: 309 --YNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFE 366
             Y L R   SK   +KA         ++N P+E I+ Y  L     +LG    A+  +E
Sbjct: 395 LLYKLKRYEESKELCKKAI--------DLN-PYECIY-YNNLANSLNELGLLGEAMQVYE 444

Query: 367 KVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTG 426
             +   P+N E    L     +   IE A +   K+ +++P+ A+A+ +LG + I     
Sbjct: 445 TAIRFNPNNSELYCNLATALQKSNNIEDAIKNYEKSIELNPKLAEAYNNLGSIYIE---- 500

Query: 427 AALDAFKTARTLLKKAG--EEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLL 484
             L+ +K A   +KKA   ++   +   N+G + F  G +  + Q++K            
Sbjct: 501 --LEDYKKATNYIKKAIKIDKNLAQAFFNLGNVLFSLGRYSESVQAYKK----------- 547

Query: 485 DSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAA 544
                                           +++L  +   V F L   L ++ +   A
Sbjct: 548 --------------------------------YIKLDNSNFEVYFKLGNALYELKEFKKA 575

Query: 545 SVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLEL 604
             +Y   +    +Y  +   LA      NN+  +I+   + + ++  Y  A + LG +  
Sbjct: 576 IDMYLKSIEINSNYTHSNFNLANTFYTTNNINEAIKYYEKVISIDPLYIEAYNNLGTMFC 635

Query: 605 KNDDWVKAKETFRAA 619
              D+ KAK  ++ A
Sbjct: 636 ALKDYKKAKGCYQIA 650



 Score = 45.4 bits (106), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 53/254 (20%), Positives = 101/254 (39%), Gaps = 44/254 (17%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
           A + Y K+  ++      +   G + +   + ++A++  K  ++ D++   A      V 
Sbjct: 473 AIKNYEKSIELNPKLAEAYNNLGSIYIELEDYKKATNYIKKAIKIDKNLAQAFFNLGNVL 532

Query: 173 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 232
           F+ GRYS+S++ YK+ +++  S    +   +G   Y+L +  KA   + ++++++     
Sbjct: 533 FSLGRYSESVQAYKKYIKLDNS-NFEVYFKLGNALYELKEFKKAIDMYLKSIEINSN--- 588

Query: 233 ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTE 292
                                            Y     N LAN F+ T     + +  +
Sbjct: 589 ---------------------------------YTHSNFN-LANTFYTTNN---INEAIK 611

Query: 293 TALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQ 352
               V +  P    +Y NL   + +  DY+KA   Y  ++K  N P+ F   YY L   Q
Sbjct: 612 YYEKVISIDPLYIEAYNNLGTMFCALKDYKKAKGCYQIAIK--NNPN-FALGYYSLATTQ 668

Query: 353 LKLGDFRSALTNFE 366
             LG+   A  N E
Sbjct: 669 YMLGEKEEADKNNE 682


>gi|291569240|dbj|BAI91512.1| TPR domain protein [Arthrospira platensis NIES-39]
          Length = 1337

 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 92/390 (23%), Positives = 153/390 (39%), Gaps = 67/390 (17%)

Query: 90  GVYYTYLGKIETKQREKEEHFILATQYYNKASRI--DMHEPSTWVGKGQLLLAKGEVEQA 147
           GV  +YLG+ E            A   Y++A +   D+HE   W  +G  L   GE E+A
Sbjct: 320 GVALSYLGEYEK-----------AISSYDQAIKFKPDLHE--AWNNRGNALANLGEYEKA 366

Query: 148 SSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCR 207
            S++   ++   D   A   +     N G Y  ++  Y +A++  P    A     GL  
Sbjct: 367 ISSYDQAIKFKPDYHEAWYNRGLALGNLGEYEKAISSYDQAIKFKPDYHEAW-FNRGLAL 425

Query: 208 YKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYC 267
           Y LG+  KA  ++ +A++  P+  EA     V                            
Sbjct: 426 YDLGEYEKAISSYDQAIKFKPDYHEAWFVRGV---------------------------- 457

Query: 268 AMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLY 327
             AL+YL  H          E+   +        P    ++ N   +    G+YEKA   
Sbjct: 458 --ALSYLGEH----------EKAISSYDQAIKIKPDLHEAWSNRGSALSHLGEYEKAISS 505

Query: 328 YMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYV 387
           Y  ++K     HE    ++  G     LG++  A++++++ ++  PD  E     G    
Sbjct: 506 YDQAIKFKPDDHE---AWFNRGLALSYLGEYEKAISSYDQAIKFKPDYHEAWSNRGGALS 562

Query: 388 QLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP 447
            LG+ EKA     +A K  P D QA+ + G  L      + L  ++ A +   +A +  P
Sbjct: 563 DLGEYEKAISSYDQAIKFKPDDHQAWSNRGVAL------SYLGEYEKAISSYDQAIKFKP 616

Query: 448 I--EVLNNIGVIHFEKGEFESAHQSFKDAL 475
              E  +N G+     GE+E A  S+  A+
Sbjct: 617 DFHEAWSNRGLALSYLGEYEKAISSYDQAI 646


>gi|428315765|ref|YP_007113647.1| Tetratricopeptide TPR_1 repeat-containing protein [Oscillatoria
           nigro-viridis PCC 7112]
 gi|428239445|gb|AFZ05231.1| Tetratricopeptide TPR_1 repeat-containing protein [Oscillatoria
           nigro-viridis PCC 7112]
          Length = 1290

 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 67/284 (23%), Positives = 132/284 (46%), Gaps = 12/284 (4%)

Query: 138 LLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPG 197
            L +G++++A +A +  L+   D + A +         G+   ++  Y +AL + P+   
Sbjct: 487 FLVQGKIKEAIAACQQALKIRPDFIYAYVTLGNALQAEGKTEAAIRSYSQALVLQPNF-A 545

Query: 198 AIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKM 257
            +R  IG   +K+G+L +A   +Q+A+ L P+   A   L  +    ++   I   +   
Sbjct: 546 EVRANIGSMYFKMGRLEEAIAHYQQAIALSPDLAGAHWNLGKV---YHQHGNIEAAIACF 602

Query: 258 QRAFEIYPYCAMALNY--LANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSY 315
           +R  E+ P    A  +  L N  F  G+     +  E A+A+    P  + +Y N+  + 
Sbjct: 603 KRTSELNPQLVGADFHFNLGNRLFSQGKRDEAIECYEKAIAIK---PDWAEAYGNIGSAR 659

Query: 316 HSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDN 375
             +G+ E A  YY  +V    KPH  +  ++ +    L+   +  A+TN++  L+I PD 
Sbjct: 660 SQQGNLEAAIAYYQKAVAL--KPHLEVL-HFNIANSFLQQNKYDEAITNYQNTLKIKPDW 716

Query: 376 CETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGEL 419
            E    LG+ +   G++E+A    ++A  + P  A+ +  +G +
Sbjct: 717 PEVHANLGNCFSMQGRLEEALASYQQALGLKPNWAEVYCRMGHI 760



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 58/121 (47%), Gaps = 6/121 (4%)

Query: 356 GDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFID 415
           GD   A+ N++K LE  P++ E  K L  +Y   G+ EKA      A K  P  A A++ 
Sbjct: 229 GDLGGAIENYQKALEFNPEDAEVHKKLAEVYALQGEFEKAIASCNLAIKFKPNFAAAYLT 288

Query: 416 LGELLISSDT-GAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDA 474
           +G  L S +    A+ A+  A  +  +  E        N+G ++++ GE E A   ++ A
Sbjct: 289 MGNALHSQNKLEMAIQAYLQALEIQPEFAEASA-----NLGSMYYKLGELEQAANYYQKA 343

Query: 475 L 475
           L
Sbjct: 344 L 344



 Score = 50.1 bits (118), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 65/269 (24%), Positives = 112/269 (41%), Gaps = 17/269 (6%)

Query: 211 GQLGKARQAFQRALQLDPENVEALVALA-VMDLQANEAAGIRKGMEKMQRAFEIYPYCAM 269
           G++ +A  A Q+AL++ P+ + A V L   +  +    A IR       +A  + P  A 
Sbjct: 491 GKIKEAIAACQQALKIRPDFIYAYVTLGNALQAEGKTEAAIRS----YSQALVLQPNFAE 546

Query: 270 ALNYLANHFFFTGQHFLVEQLT--ETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLY 327
               + + +F  G+  L E +   + A+A++   P  + +++NL + YH  G+ E A + 
Sbjct: 547 VRANIGSMYFKMGR--LEEAIAHYQQAIALS---PDLAGAHWNLGKVYHQHGNIE-AAIA 600

Query: 328 YMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYV 387
                 E+N        ++ LG      G    A+  +EK + I PD  E    +G    
Sbjct: 601 CFKRTSELNPQLVGADFHFNLGNRLFSQGKRDEAIECYEKAIAIKPDWAEAYGNIGSARS 660

Query: 388 QLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP 447
           Q G +E A    +KA  + P       ++    +  +     D   T      K   + P
Sbjct: 661 QQGNLEAAIAYYQKAVALKPHLEVLHFNIANSFLQQNK---YDEAITNYQNTLKIKPDWP 717

Query: 448 IEVLNNIGVIHFEKGEFESAHQSFKDALG 476
            EV  N+G     +G  E A  S++ ALG
Sbjct: 718 -EVHANLGNCFSMQGRLEEALASYQQALG 745



 Score = 45.4 bits (106), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 58/119 (48%), Gaps = 3/119 (2%)

Query: 302 PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSA 361
           P  +  +  LA  Y  +G++EKA      ++K   KP+ F   Y  +G           A
Sbjct: 246 PEDAEVHKKLAEVYALQGEFEKAIASCNLAIK--FKPN-FAAAYLTMGNALHSQNKLEMA 302

Query: 362 LTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 420
           +  + + LEI P+  E    LG +Y +LG++E+A    +KA  I+P+ +   + LG +L
Sbjct: 303 IQAYLQALEIQPEFAEASANLGSMYYKLGELEQAANYYQKALAINPQLSSVNLMLGSVL 361



 Score = 41.6 bits (96), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 81/341 (23%), Positives = 139/341 (40%), Gaps = 36/341 (10%)

Query: 141 KGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIR 200
           +GE E+A ++  + ++   +   A L       ++ +   +++ Y +AL++ P    A  
Sbjct: 262 QGEFEKAIASCNLAIKFKPNFAAAYLTMGNALHSQNKLEMAIQAYLQALEIQPEFAEA-S 320

Query: 201 LGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRA 260
             +G   YKLG+L +A   +Q+AL ++P+     + L  + LQ  E   +   +   Q+ 
Sbjct: 321 ANLGSMYYKLGELEQAANYYQKALAINPQLSSVNLMLGSV-LQQQEK--LDAAIACYQKV 377

Query: 261 FEIYPYCAMAL----NYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYH 316
            +  P  A A     + LA     T     +E  TE+  A            Y L  S  
Sbjct: 378 LQQQPGDASAAEKLSSLLAQKQRQTTDSNFIELETESGAAQPVS--VNKDEGYGLQPS-- 433

Query: 317 SKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQV-QLKLGDFRSALTNFEKVLEIYPDN 375
                    L    + + +N P  F  P     QV  L + D    + NFE+V       
Sbjct: 434 ------SINLPPAPTTETLNTP--FTNPAELSEQVTSLNVPD-SGQVANFEEV------- 477

Query: 376 CETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL-ISSDTGAALDAFKT 434
            E    L   ++  G+I++A    ++A KI P    A++ LG  L     T AA+ ++  
Sbjct: 478 -EPYNKLAEQFLVQGKIKEAIAACQQALKIRPDFIYAYVTLGNALQAEGKTEAAIRSYSQ 536

Query: 435 ARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
           A  L          EV  NIG ++F+ G  E A   ++ A+
Sbjct: 537 ALVLQPNFA-----EVRANIGSMYFKMGRLEEAIAHYQQAI 572


>gi|304315338|ref|YP_003850485.1| tetratricopeptide repeat domain-containing protein
           [Methanothermobacter marburgensis str. Marburg]
 gi|302588797|gb|ADL59172.1| tetratricopeptide repeat domain-containing protein
           [Methanothermobacter marburgensis str. Marburg]
          Length = 386

 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 78/295 (26%), Positives = 132/295 (44%), Gaps = 44/295 (14%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
           A + Y +A +ID  +  TW  KG LL   G+ E+A   ++  LE ++ N  A   +    
Sbjct: 103 ALECYERALQIDPEDDGTWNNKGALLDTIGKPEKAIECYEKALEINQKNAKAWYNKGNGL 162

Query: 173 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 232
            + G+Y ++LE Y++ALQ++     A      L   +L +  +A + ++RALQ+DPE+  
Sbjct: 163 RSLGKYEEALECYEKALQINAEFVEAW-YNKALILEELKRYDEALECYERALQIDPED-- 219

Query: 233 ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTE 292
                   D   N    +   + K ++A E Y   A+ +N   N   +  +  ++E+L  
Sbjct: 220 --------DGTWNNKGALLDTIGKPEKAIECYEK-ALEINQ-KNAKAWNNKGVVLEELKR 269

Query: 293 TALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQ 352
              A+                       YEKA         EIN  ++  +   G+  + 
Sbjct: 270 YDEALEC---------------------YEKA--------LEINLENDETWANKGV--LL 298

Query: 353 LKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 407
            KLG +  AL  FEK LEI P+  +  K  G I   L + E+A +  ++A K++P
Sbjct: 299 RKLGKYEEALECFEKALEINPEFADAWKWKGIILEDLKKPEEALKCHKQALKLNP 353



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 88/344 (25%), Positives = 152/344 (44%), Gaps = 30/344 (8%)

Query: 106 KEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPAL 165
           K+  +  A + + KA +   ++P         LL     E+A   ++ +L+ +     A 
Sbjct: 28  KQGKYKEALKEFRKALKASPNDPEILHYNAMTLLKLKRPEKALECYEKILKNNPKLAEAW 87

Query: 166 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 225
             +  V     RY ++LE Y+RALQ+ P   G      G     +G+  KA + +++AL+
Sbjct: 88  NNKGVVLKELKRYDEALECYERALQIDPEDDGTWN-NKGALLDTIGKPEKAIECYEKALE 146

Query: 226 LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 285
           ++ +N +A           N+  G+R  + K + A E Y   A+ +N      ++  +  
Sbjct: 147 INQKNAKAWY---------NKGNGLR-SLGKYEEALECYEK-ALQINAEFVEAWYN-KAL 194

Query: 286 LVEQLT---------ETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEIN 336
           ++E+L          E AL +    P    ++ N      + G  EKA   Y  ++ EIN
Sbjct: 195 ILEELKRYDEALECYERALQID---PEDDGTWNNKGALLDTIGKPEKAIECYEKAL-EIN 250

Query: 337 KPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQ 396
           + +   +   G+   +LK  D   AL  +EK LEI  +N ET    G +  +LG+ E+A 
Sbjct: 251 QKNAKAWNNKGVVLEELKRYD--EALECYEKALEINLENDETWANKGVLLRKLGKYEEAL 308

Query: 397 ELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLK 440
           E   KA +I+P  A A+   G  +I  D     +A K  +  LK
Sbjct: 309 ECFEKALEINPEFADAWKWKG--IILEDLKKPEEALKCHKQALK 350


>gi|196017432|ref|XP_002118524.1| hypothetical protein TRIADDRAFT_62555 [Trichoplax adhaerens]
 gi|190578804|gb|EDV18990.1| hypothetical protein TRIADDRAFT_62555 [Trichoplax adhaerens]
          Length = 1292

 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 149/749 (19%), Positives = 298/749 (39%), Gaps = 140/749 (18%)

Query: 88  ALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDM-----HEPS---TWVGKGQLLL 139
           ++   Y  +G +   Q + ++    A   +NK+ +I++     + PS   T+   G +  
Sbjct: 184 SIATTYHNIGSVYNHQGKYDD----ALSMFNKSLKIELTQLADNHPSIATTYHNIGGVHK 239

Query: 140 AKGEVEQASSAF----KIVLEADRDNVPALLGQ----ACVEFNRGRYSDSLEFYKRALQV 191
            +G+   A S F    KI L    DN P++         +  ++G+Y D+L  Y ++L++
Sbjct: 240 DQGKYNDALSMFNKSLKIQLTQLGDNHPSMAATYHNIGSIYNHQGKYDDALSTYYKSLKI 299

Query: 192 --------HPSCPGAIRLGIGLCRYKLGQLGKARQAFQRAL-----QLDPENVEALVALA 238
                   HPS        IG      G+   A   + ++L     QL   +    V+ +
Sbjct: 300 KLTQLGDNHPSIATTYH-NIGSVYKDQGKYDDALSMYNKSLKIILTQLGDNHPSIAVSYS 358

Query: 239 VMDLQANEAAGIRKGMEKMQRAFEI--------YPYCAMALNYLANHFFFTGQHFLVEQL 290
            + L  N+       +    ++ +I        +P  A   + + + +   G++     +
Sbjct: 359 NIGLVYNDQGKYDDALSMYNKSLKIKLTQLGDNHPSIAATYHNIGSVYNHQGKYGDALSM 418

Query: 291 TETALAV-----TNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK----EINKPHEF 341
              +L +      N+ P+ + +Y+N+      +G Y+ A   Y  S+K    ++   H  
Sbjct: 419 YNKSLKIQLTQLGNNHPSIAVTYHNIGSVCSHQGKYDDALSMYNKSLKILQTQLGDNHPS 478

Query: 342 IFPYYG-LGQVQLKLGDFRSALTNFEKVLEI--------YPDNCETLKALGHIYVQLGQI 392
           I   YG +GQV    G +  AL+ + K L+I        +P    T   +G +Y   G+ 
Sbjct: 479 IAVSYGNIGQVYNDQGKYDDALSTYNKSLKILQTQLGDNHPSIATTYHNIGSVYKDQGKY 538

Query: 393 EKAQELLRKAAKID--------PRDAQAFIDLGELLISSDTGAALDAF----KTARTLLK 440
           + A  +  K+ KI+        P  A  + ++G   +  D G   DA     K+ +  L 
Sbjct: 539 DHALSMYNKSLKINQTQLGDNHPSIATTYHNIGS--VYKDQGKYDDALSMQNKSLKIQLT 596

Query: 441 KAGEEVP-IEVL-NNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASAS 498
           + G+  P I V+ +NIG ++ ++G++++A   +  +L   I L+ L         D   S
Sbjct: 597 QLGDNHPSIAVIYHNIGSVYEDQGKYDNALSMYNKSL--QIQLSQLG--------DNHPS 646

Query: 499 MLQFKDMQLFHRF----ENDGNHVELPWNKVTVLFNLARLLEQI-----HDTVAASVLYR 549
           +        +H F    E+ G      ++    +FN +  ++Q      H ++AA     
Sbjct: 647 I-----ATTYHNFGSVYEDQG-----KYDDALSMFNKSLKIKQTQLGNNHPSIAA----- 691

Query: 550 LILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVN------------GKYPNALS 597
                       Y  ++ +   + N   ++ + N++LK+N              Y N  S
Sbjct: 692 -----------KYHNISGVNNHQGNYDDALSMYNKSLKINQTQLGDNHPSIATTYHNIGS 740

Query: 598 MLGDLELKNDDWVKA-KETFRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATH 656
           +  D + KNDD V   K++ +   D T   D++ +++    N      ++ +     A +
Sbjct: 741 VTKDQD-KNDDAVSMYKKSLKI--DLTQLGDNHPSIAATYHNIAGVYNDQGKHDNALAMY 797

Query: 657 LEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFT---QVQEAASGSVFVQM 713
            +  K   T++   H S     +  G V + +G++D +  +     ++Q    G     +
Sbjct: 798 NKSLKIKLTKLGDNHLSIATTYHSIGSVYSHQGKYDDALSMHNKSLKIQLTQLGDNHPSI 857

Query: 714 PDVWINLAHVYFAQGNFALAMKMYQNCLR 742
              +  +  VY   G +  A+ MY   L+
Sbjct: 858 AVTYSYIGQVYNDHGKYDDALSMYNKSLK 886



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 96/477 (20%), Positives = 195/477 (40%), Gaps = 67/477 (14%)

Query: 305 SHSYYNLARSYHSKGDYEKAGLYYMASVK----EINKPHEFI-FPYYGLGQVQLKLGDFR 359
           S SY N+A  Y ++G Y  A   Y  S++    ++   H  I   Y+ +G V    G + 
Sbjct: 144 SESYLNIASIYDNQGKYNDALSMYNKSLRIQLTQLGDNHPSIATTYHNIGSVYNHQGKYD 203

Query: 360 SALTNFEKVLEI--------YPDNCETLKALGHIYVQLGQIEKAQELLRKAAKID----- 406
            AL+ F K L+I        +P    T   +G ++   G+   A  +  K+ KI      
Sbjct: 204 DALSMFNKSLKIELTQLADNHPSIATTYHNIGGVHKDQGKYNDALSMFNKSLKIQLTQLG 263

Query: 407 ---PRDAQAFIDLGELLISSDTGAALDA----FKTARTLLKKAGEEVP--IEVLNNIGVI 457
              P  A  + ++G   I +  G   DA    +K+ +  L + G+  P      +NIG +
Sbjct: 264 DNHPSMAATYHNIGS--IYNHQGKYDDALSTYYKSLKIKLTQLGDNHPSIATTYHNIGSV 321

Query: 458 HFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNH 517
           + ++G+++ A   +  +L   I LT L     +  +  S   L + D     ++++    
Sbjct: 322 YKDQGKYDDALSMYNKSL--KIILTQLGDNHPSIAVSYSNIGLVYNDQG---KYDD---- 372

Query: 518 VELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILF----KYQDYVDAY-----LRLAAI 568
             L     ++   L +L +  H ++AA+      ++    KY D +  Y     ++L  +
Sbjct: 373 -ALSMYNKSLKIKLTQLGDN-HPSIAATYHNIGSVYNHQGKYGDALSMYNKSLKIQLTQL 430

Query: 569 AKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDS 628
                ++ ++   +       GKY +ALSM          + K+ +  +     T   D+
Sbjct: 431 GNNHPSIAVTYHNIGSVCSHQGKYDDALSM----------YNKSLKILQ-----TQLGDN 475

Query: 629 YATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEK 688
           + ++++   N      ++ +     +T+ +  K L T++   H S     +  G V  ++
Sbjct: 476 HPSIAVSYGNIGQVYNDQGKYDDALSTYNKSLKILQTQLGDNHPSIATTYHNIGSVYKDQ 535

Query: 689 GQFDVSKDLFT---QVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLR 742
           G++D +  ++    ++ +   G     +   + N+  VY  QG +  A+ M    L+
Sbjct: 536 GKYDHALSMYNKSLKINQTQLGDNHPSIATTYHNIGSVYKDQGKYDDALSMQNKSLK 592



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 84/379 (22%), Positives = 149/379 (39%), Gaps = 84/379 (22%)

Query: 164 ALLGQACVEFNRGRYSDSLEFYKRALQV--------HPSCPGAIRLGIGLCRYKLGQLGK 215
           + L  A +  N+G+Y+D+L  Y ++L++        HPS        IG      G+   
Sbjct: 146 SYLNIASIYDNQGKYNDALSMYNKSLRIQLTQLGDNHPSIATTYH-NIGSVYNHQGKYDD 204

Query: 216 ARQAFQRALQLDPENVEALVALA----VMDLQANEAAGIRKGMEKMQRAFEIY------- 264
           A   F ++L+++      L  LA     +    +   G+ K   K   A  ++       
Sbjct: 205 ALSMFNKSLKIE------LTQLADNHPSIATTYHNIGGVHKDQGKYNDALSMFNKSLKIQ 258

Query: 265 ------PYCAMALNY-----LANH---------FFFTGQHFLVEQLTETALAVTNHGPTK 304
                  + +MA  Y     + NH          ++      + QL +      NH P+ 
Sbjct: 259 LTQLGDNHPSMAATYHNIGSIYNHQGKYDDALSTYYKSLKIKLTQLGD------NH-PSI 311

Query: 305 SHSYYNLARSYHSKGDYEKAGLYYMASVKEI------NKPHEFIFPYYGLGQVQLKLGDF 358
           + +Y+N+   Y  +G Y+ A   Y  S+K I      N P      Y  +G V    G +
Sbjct: 312 ATTYHNIGSVYKDQGKYDDALSMYNKSLKIILTQLGDNHP-SIAVSYSNIGLVYNDQGKY 370

Query: 359 RSALTNFEKVLEI--------YPDNCETLKALGHIYVQLGQIEKAQELLRKAAKID---- 406
             AL+ + K L+I        +P    T   +G +Y   G+   A  +  K+ KI     
Sbjct: 371 DDALSMYNKSLKIKLTQLGDNHPSIAATYHNIGSVYNHQGKYGDALSMYNKSLKIQLTQL 430

Query: 407 ----PRDAQAFIDLGELLISSDTGAALDAF----KTARTLLKKAGEEVP-IEV-LNNIGV 456
               P  A  + ++G   + S  G   DA     K+ + L  + G+  P I V   NIG 
Sbjct: 431 GNNHPSIAVTYHNIGS--VCSHQGKYDDALSMYNKSLKILQTQLGDNHPSIAVSYGNIGQ 488

Query: 457 IHFEKGEFESAHQSFKDAL 475
           ++ ++G+++ A  ++  +L
Sbjct: 489 VYNDQGKYDDALSTYNKSL 507



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 91/418 (21%), Positives = 170/418 (40%), Gaps = 78/418 (18%)

Query: 117  YNKASRIDMHE--------PSTWVGKGQLLLAKGEVEQASS----AFKIVLEADRDNVPA 164
            YNK+ +I + +         +T+   G +   +G+ + A S    + KI L    DN P+
Sbjct: 797  YNKSLKIKLTKLGDNHLSIATTYHSIGSVYSHQGKYDDALSMHNKSLKIQLTQLGDNHPS 856

Query: 165  L------LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQ 218
            +      +GQ  V  + G+Y D+L  Y ++L++  +  G     I +  + +G +   + 
Sbjct: 857  IAVTYSYIGQ--VYNDHGKYDDALSMYNKSLKIQLTQLGDNHPSIAMTYHNIGSVYNYQG 914

Query: 219  AFQRALQLDPENVE-ALVALA----VMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNY 273
             +  AL +  ++++  L  L      +    +    + K   K   A  +Y Y ++ +  
Sbjct: 915  KYDDALSMYNKSLKIKLTQLGDNHPSIATTYHNIGSVYKDRSKYDDALSMY-YKSLKIK- 972

Query: 274  LANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK 333
                           QL +      NH P+ + +Y N+ + YH +G Y+ A   Y  S+K
Sbjct: 973  -------------RSQLGD------NH-PSIAITYSNIGQVYHHQGKYDDALSMYNKSLK 1012

Query: 334  ----EINKPHEFI-FPYYGLGQVQLKLGDFRSALTNFEKVLEI--------YPDNCETLK 380
                ++   H  I   Y+ +G      G +  AL+ F K L+I        +P    T  
Sbjct: 1013 IQLTQLGDNHPSIAATYHNIGDTYYHQGKYDDALSMFNKSLKINQTQLGDNHPSIASTYH 1072

Query: 381  ALGHIYVQLGQIEKAQELLRKAAKI--------DPRDAQAFIDLGELLISSDTGAALDAF 432
             +G +Y   G+ + A  +  K+ KI         P  A  + +L  +      G   DA 
Sbjct: 1073 NIGSVYEDQGKYDAALSMYYKSLKIKLTQLGDNHPNIATTYHNLAGVYYHQ--GKYDDAL 1130

Query: 433  ----KTARTLLKKAGEEVPI--EVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLL 484
                K+ +  L + G+  P      +NIG ++  +G+++     +K +L   I LT L
Sbjct: 1131 LMYNKSLKINLTQLGDNHPTIATTYHNIGGVYNHQGKYDDTVSMYKKSL--KILLTQL 1186



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 93/462 (20%), Positives = 188/462 (40%), Gaps = 86/462 (18%)

Query: 88   ALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDM-----HEPS---TWVGKGQLLL 139
            ++ V Y  +G +   Q + +     A   YNK+ +I +     + PS   T+   G +  
Sbjct: 604  SIAVIYHNIGSVYEDQGKYDN----ALSMYNKSLQIQLSQLGDNHPSIATTYHNFGSVYE 659

Query: 140  AKGEVEQASSAFKIVLEADR----DNVPALLGQ----ACVEFNRGRYSDSLEFYKRALQV 191
             +G+ + A S F   L+  +    +N P++  +    + V  ++G Y D+L  Y ++L++
Sbjct: 660  DQGKYDDALSMFNKSLKIKQTQLGNNHPSIAAKYHNISGVNNHQGNYDDALSMYNKSLKI 719

Query: 192  HPSCPGAIRLGIGLCRYKLGQLGK-------ARQAFQRALQLD----PENVEALVALAVM 240
            + +  G     I    + +G + K       A   ++++L++D     +N  ++ A    
Sbjct: 720  NQTQLGDNHPSIATTYHNIGSVTKDQDKNDDAVSMYKKSLKIDLTQLGDNHPSIAAT--- 776

Query: 241  DLQANEAAGIRKGMEKMQRAFEIY------PYCAMALNYL--ANHFFFTGQHFLVEQLTE 292
                +  AG+     K   A  +Y          +  N+L  A  +   G  +  +   +
Sbjct: 777  ---YHNIAGVYNDQGKHDNALAMYNKSLKIKLTKLGDNHLSIATTYHSIGSVYSHQGKYD 833

Query: 293  TALAVTN------------HGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK----EIN 336
             AL++ N            + P+ + +Y  + + Y+  G Y+ A   Y  S+K    ++ 
Sbjct: 834  DALSMHNKSLKIQLTQLGDNHPSIAVTYSYIGQVYNDHGKYDDALSMYNKSLKIQLTQLG 893

Query: 337  KPHEFI-FPYYGLGQVQLKLGDFRSALTNFEKVLEI--------YPDNCETLKALGHIYV 387
              H  I   Y+ +G V    G +  AL+ + K L+I        +P    T   +G +Y 
Sbjct: 894  DNHPSIAMTYHNIGSVYNYQGKYDDALSMYNKSLKIKLTQLGDNHPSIATTYHNIGSVYK 953

Query: 388  QLGQIEKAQELLRKAAKI--------DPRDAQAFIDLGELLISSDTGAALDAF----KTA 435
               + + A  +  K+ KI         P  A  + ++G+  +    G   DA     K+ 
Sbjct: 954  DRSKYDDALSMYYKSLKIKRSQLGDNHPSIAITYSNIGQ--VYHHQGKYDDALSMYNKSL 1011

Query: 436  RTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDAL 475
            +  L + G+  P      +NIG  ++ +G+++ A   F  +L
Sbjct: 1012 KIQLTQLGDNHPSIAATYHNIGDTYYHQGKYDDALSMFNKSL 1053



 Score = 46.6 bits (109), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 65/318 (20%), Positives = 134/318 (42%), Gaps = 53/318 (16%)

Query: 119  KASRIDMHEPS---TWVGKGQLLLAKGEVEQASSAF----KIVLEADRDNVPALLGQ--- 168
            K S++  + PS   T+   GQ+   +G+ + A S +    KI L    DN P++      
Sbjct: 972  KRSQLGDNHPSIAITYSNIGQVYHHQGKYDDALSMYNKSLKIQLTQLGDNHPSIAATYHN 1031

Query: 169  -ACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLD 227
                 +++G+Y D+L  + ++L+++ +  G     I    + +G + + +  +  AL + 
Sbjct: 1032 IGDTYYHQGKYDDALSMFNKSLKINQTQLGDNHPSIASTYHNIGSVYEDQGKYDAALSMY 1091

Query: 228  PENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLV 287
             ++++                       K+ +  + +P  A   + LA  ++  G++   
Sbjct: 1092 YKSLKI----------------------KLTQLGDNHPNIATTYHNLAGVYYHQGKYDDA 1129

Query: 288  EQLTETALAVT------NHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK----EINK 337
              +   +L +       NH PT + +Y+N+   Y+ +G Y+     Y  S+K    ++  
Sbjct: 1130 LLMYNKSLKINLTQLGDNH-PTIATTYHNIGGVYNHQGKYDDTVSMYKKSLKILLTQLGD 1188

Query: 338  PHEFIFP-YYGLGQVQLKLGDFRSALTNFEKVLEI----YPDN----CETLKALGHIYVQ 388
             H  I   Y+  G V    G +  AL+ + K L+I      DN      T   +G ++  
Sbjct: 1189 NHLSIAAIYHSFGSVYNNQGKYDDALSVYYKSLKIKLTKLGDNHLSIATTYHNIGGVHSH 1248

Query: 389  LGQIEKAQELLRKAAKID 406
             G+ + A  +  K+ KI+
Sbjct: 1249 QGKYDDALLMFNKSLKIE 1266


>gi|298246522|ref|ZP_06970328.1| serine/threonine protein kinase with TPR repeats [Ktedonobacter
           racemifer DSM 44963]
 gi|297554003|gb|EFH87868.1| serine/threonine protein kinase with TPR repeats [Ktedonobacter
           racemifer DSM 44963]
          Length = 747

 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 84/348 (24%), Positives = 157/348 (45%), Gaps = 38/348 (10%)

Query: 140 AKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAI 199
           A+  V +A   +  V+  D  N  A  G+   +   G++ ++L+ + RALQ+ P    ++
Sbjct: 353 AQRRVPEALKLYDQVIRTDSLNAQAWQGRGLTQALNGQHREALQSFTRALQLDPDLVTSL 412

Query: 200 RLGIGLCRYKLGQLGKARQAFQRALQLDPENVEAL----VALAVMDLQANEAAGIRKGME 255
             G G+   +L Q   A Q+F RA+ L+P N  A      AL+ + L         + + 
Sbjct: 413 N-GKGVALNRLRQNRDALQSFDRAILLEPGNAVAWNGKGAALSALGLP-------EQALN 464

Query: 256 KMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLT--ETALAVTNHGPTKSHSY-YNLA 312
               A    P  A+A         ++ +  ++ Q+   E AL  +     ++ SY  N A
Sbjct: 465 AFDTALSFDPRMALA---------WSNKSLILRQMRKYEEALQASE----QALSYEPNSA 511

Query: 313 RSYHSKG----DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKV 368
            +++SKG    +  +    Y A  + + +   F    YG+G V      F+SAL N+++ 
Sbjct: 512 LNWNSKGLILLEMGRLREAYQAYQEALKRDSRFAPALYGMGNVLYAQQKFKSALDNYDRA 571

Query: 369 LEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDT-GA 427
           L+  P+  +  +  G +  +LG   ++ E   +A +IDP  A A++    +L   +    
Sbjct: 572 LQFDPNYVKVWERRGQLLQELGNYRRSLESFERATQIDPSFAPAWLGKATVLSRMERYDM 631

Query: 428 ALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
           AL+A++ A   L++    +P   LN  G   +  G + +A  ++ +AL
Sbjct: 632 ALNAYEEA---LRR-NPSLPA-ALNGKGNALYRLGNYSAALSAYDNAL 674



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 65/128 (50%), Gaps = 1/128 (0%)

Query: 107 EEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALL 166
           ++ F  A   Y++A + D +    W  +GQLL   G   ++  +F+   + D    PA L
Sbjct: 558 QQKFKSALDNYDRALQFDPNYVKVWERRGQLLQELGNYRRSLESFERATQIDPSFAPAWL 617

Query: 167 GQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQL 226
           G+A V     RY  +L  Y+ AL+ +PS P A+  G G   Y+LG    A  A+  AL++
Sbjct: 618 GKATVLSRMERYDMALNAYEEALRRNPSLPAALN-GKGNALYRLGNYSAALSAYDNALKV 676

Query: 227 DPENVEAL 234
           +P  V AL
Sbjct: 677 NPRMVSAL 684



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 78/183 (42%), Gaps = 21/183 (11%)

Query: 126 HEPST---WVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSL 182
           +EP++   W  KG +LL  G + +A  A++  L+ D    PAL G   V + + ++  +L
Sbjct: 506 YEPNSALNWNSKGLILLEMGRLREAYQAYQEALKRDSRFAPALYGMGNVLYAQQKFKSAL 565

Query: 183 EFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDL 242
           + Y RALQ  P+    +    G    +LG   ++ ++F+RA Q+DP    A +  A    
Sbjct: 566 DNYDRALQFDPNY-VKVWERRGQLLQELGNYRRSLESFERATQIDPSFAPAWLGKAT--- 621

Query: 243 QANEAAGIRKGMEKMQRAFEIY-------PYCAMALNYLANHFFFTGQHFLVEQLTETAL 295
                  +   ME+   A   Y       P    ALN   N  +  G +       + AL
Sbjct: 622 -------VLSRMERYDMALNAYEEALRRNPSLPAALNGKGNALYRLGNYSAALSAYDNAL 674

Query: 296 AVT 298
            V 
Sbjct: 675 KVN 677


>gi|196006385|ref|XP_002113059.1| hypothetical protein TRIADDRAFT_56833 [Trichoplax adhaerens]
 gi|190585100|gb|EDV25169.1| hypothetical protein TRIADDRAFT_56833 [Trichoplax adhaerens]
          Length = 996

 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 75/299 (25%), Positives = 135/299 (45%), Gaps = 16/299 (5%)

Query: 89  LGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQAS 148
             V ++ LG +   Q E      LA  ++ KA  +D      ++  G +L      ++AS
Sbjct: 169 FAVAWSNLGCVFNSQGE----IWLAIHHFEKAVTLDNGFLDAYINLGNVLKEARIFDRAS 224

Query: 149 SAFKIVLEADRDNVPALLGQ-ACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCR 207
           +A+   L    +N P +LG  ACV + +G    +++ YKRA+++ P+ P A    +    
Sbjct: 225 TAYLRALNLSPNN-PTVLGNLACVYYEQGLMDLAVDTYKRAIELQPNFPDAY-CNLANAL 282

Query: 208 YKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYC 267
            +LG++ +A + +  AL L P + ++L  LA +     E   I +  +  ++A EI+P  
Sbjct: 283 KELGKVTEAEECYNTALSLCPTHADSLNNLANIK---REKGQIGEASKLYRKALEIFPEF 339

Query: 268 AMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLY 327
           A A + LA+      Q  L E L     A+  + P+ + +Y N+  +     D + A   
Sbjct: 340 AAAHSNLAS--VLQQQGKLQEALAHYKEAIRIN-PSFADAYSNMGNTLKEMQDVQGAIQC 396

Query: 328 YMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIY 386
           Y  ++ +IN    F   +  L  +    G    A+ N+   L++ PD  +    L H Y
Sbjct: 397 YTRAI-QINP--NFADAHSNLASIHKDSGSIPEAIANYRTALKLKPDFPDAFCNLAHCY 452



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 95/430 (22%), Positives = 177/430 (41%), Gaps = 25/430 (5%)

Query: 181 SLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVM 240
           S  F   A++ +P+   A    +G    +  QL +A + ++ AL+L P+ ++  + LA  
Sbjct: 53  SAHFCNMAIKSNPALSEAYS-NLGNVFKERNQLKEALENYRYALRLRPDFIDGYINLASA 111

Query: 241 DLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 300
            + A +  G  K       A +  P      N L N     G+   +E+     L     
Sbjct: 112 LVAAQDLEGAVKAYAT---ALQYNPNLYCVRNDLGNLLKALGR---LEEAKACYLKAIET 165

Query: 301 GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRS 360
            P  + ++ NL   ++S+G+   A  ++  +V   N    F+  Y  LG V  +   F  
Sbjct: 166 QPNFAVAWSNLGCVFNSQGEIWLAIHHFEKAVTLDNG---FLDAYINLGNVLKEARIFDR 222

Query: 361 ALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 420
           A T + + L + P+N   L  L  +Y + G ++ A +  ++A ++ P    A+ +L   L
Sbjct: 223 ASTAYLRALNLSPNNPTVLGNLACVYYEQGLMDLAVDTYKRAIELQPNFPDAYCNLANAL 282

Query: 421 IS-SDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGI 479
                   A + + TA +L     +      LNN+  I  EKG+   A + ++ AL   I
Sbjct: 283 KELGKVTEAEECYNTALSLCPTHADS-----LNNLANIKREKGQIGEASKLYRKALE--I 335

Query: 480 WLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIH 539
           +     + +        AS+LQ +  +L     +    + +  +      N+   L+++ 
Sbjct: 336 FPEFAAAHSNL------ASVLQ-QQGKLQEALAHYKEAIRINPSFADAYSNMGNTLKEMQ 388

Query: 540 DTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSML 599
           D   A   Y   +    ++ DA+  LA+I K   ++  +I     ALK+   +P+A   L
Sbjct: 389 DVQGAIQCYTRAIQINPNFADAHSNLASIHKDSGSIPEAIANYRTALKLKPDFPDAFCNL 448

Query: 600 GDLELKNDDW 609
                   DW
Sbjct: 449 AHCYQIICDW 458



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 79/343 (23%), Positives = 134/343 (39%), Gaps = 52/343 (15%)

Query: 135 GQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS 194
           G LL A G +E+A + +   +E   +   A     CV  ++G    ++  +++A+ +   
Sbjct: 143 GNLLKALGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNSQGEIWLAIHHFEKAVTLDNG 202

Query: 195 CPGA-IRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKG 253
              A I LG  L   ++    +A  A+ RAL L P N   L  LA +     E   +   
Sbjct: 203 FLDAYINLGNVLKEARI--FDRASTAYLRALNLSPNNPTVLGNLACVYY---EQGLMDLA 257

Query: 254 MEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLAR 313
           ++  +RA E+ P    A   LAN     G+    E+   TAL++    PT + S  NLA 
Sbjct: 258 VDTYKRAIELQPNFPDAYCNLANALKELGKVTEAEECYNTALSLC---PTHADSLNNLAN 314

Query: 314 SYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYP 373
               KG   +A   Y                                      K LEI+P
Sbjct: 315 IKREKGQIGEASKLY-------------------------------------RKALEIFP 337

Query: 374 DNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAF 432
           +       L  +  Q G++++A    ++A +I+P  A A+ ++G  L    D   A+  +
Sbjct: 338 EFAAAHSNLASVLQQQGKLQEALAHYKEAIRINPSFADAYSNMGNTLKEMQDVQGAIQCY 397

Query: 433 KTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
             A  +          +  +N+  IH + G    A  +++ AL
Sbjct: 398 TRAIQINPNFA-----DAHSNLASIHKDSGSIPEAIANYRTAL 435


>gi|254413697|ref|ZP_05027466.1| tetratricopeptide repeat domain protein [Coleofasciculus
           chthonoplastes PCC 7420]
 gi|196179294|gb|EDX74289.1| tetratricopeptide repeat domain protein [Coleofasciculus
           chthonoplastes PCC 7420]
          Length = 320

 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 61/231 (26%), Positives = 106/231 (45%), Gaps = 12/231 (5%)

Query: 246 EAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKS 305
           +A    + +E   +A + YP  A++     N FF    +  V Q    AL +    P+  
Sbjct: 31  QARQYEQAIEIYNKAIQAYPNLALSYYNRGNCFFALNDYQEVLQNYNDALKLN---PSYP 87

Query: 306 HSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNF 365
            +Y N   +Y+  GDY +A   Y  +VK  N  +E    YY  G     L +++ AL +F
Sbjct: 88  QAYNNRGNTYYLLGDYHQAIADYTQAVK-CNPKYER--AYYNRGNAYYNLSEYKQALLDF 144

Query: 366 EKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGE-LLISSD 424
              +++ PD  E+   LG+ Y+ L Q ++A +   KA  I+P  AQA+ + G      ++
Sbjct: 145 SYAIQLNPDYAESYNNLGNTYIALNQYQQAIDSYDKAIAINPNYAQAYNNRGNSYYYLNN 204

Query: 425 TGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
              A+  +  A TL     +    E  NN G  ++   +++ A +++  AL
Sbjct: 205 VVQAISNYAKAITL-----DSQNHEAYNNRGNAYYALQKYKEALKNYDQAL 250



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 56/240 (23%), Positives = 106/240 (44%), Gaps = 17/240 (7%)

Query: 173 FNRGR-------YSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 225
           +NRG        Y + L+ Y  AL+++PS P A     G   Y LG   +A   + +A++
Sbjct: 57  YNRGNCFFALNDYQEVLQNYNDALKLNPSYPQAYN-NRGNTYYLLGDYHQAIADYTQAVK 115

Query: 226 LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 285
            +P+   A           +E    ++ +     A ++ P  A + N L N +    Q+ 
Sbjct: 116 CNPKYERAYYNRGNAYYNLSE---YKQALLDFSYAIQLNPDYAESYNNLGNTYIALNQYQ 172

Query: 286 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 345
                 + A+A+    P  + +Y N   SY+   +  +A   Y  ++   ++ HE    Y
Sbjct: 173 QAIDSYDKAIAIN---PNYAQAYNNRGNSYYYLNNVVQAISNYAKAITLDSQNHE---AY 226

Query: 346 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKI 405
              G     L  ++ AL N+++ L + P++ E+    G + ++L Q +KA   L++A K+
Sbjct: 227 NNRGNAYYALQKYKEALKNYDQALTLCPNHIESYYNRGLVQIKLKQKQKAIADLQQAVKL 286


>gi|428319183|ref|YP_007117065.1| Tetratricopeptide TPR_1 repeat-containing protein [Oscillatoria
           nigro-viridis PCC 7112]
 gi|428242863|gb|AFZ08649.1| Tetratricopeptide TPR_1 repeat-containing protein [Oscillatoria
           nigro-viridis PCC 7112]
          Length = 565

 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 80/294 (27%), Positives = 118/294 (40%), Gaps = 52/294 (17%)

Query: 122 RIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDS 181
           + D HE   W  +G  L   G +E+A ++F   LE   D   A   +       GR  ++
Sbjct: 266 KADYHE--AWNNRGNALGNLGRLEEAIASFDKALEFKADYHQAWNNRGITLGKLGRLEEA 323

Query: 182 LEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV--ALAV 239
           L  Y +AL++ P        GI L   KLG+  +A  +F +AL++ P+  EA     +A+
Sbjct: 324 LASYDKALEIKPDDEAWYNRGIALG--KLGRWEEALASFDKALEIKPDKDEAWYNRGIAL 381

Query: 240 MDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTN 299
            DL   E A     +    +A EI P  A                           A  N
Sbjct: 382 DDLGRWEEA-----IASYDKALEIIPDDA---------------------------AWNN 409

Query: 300 HGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFR 359
            G        NL R   +   Y+KA         EI KP  +   +Y  G   + LG   
Sbjct: 410 RGIALG----NLGRLEEAIASYDKA--------LEI-KPDSYE-SWYNRGSAMINLGRLE 455

Query: 360 SALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAF 413
            A+ +++K LEI PD+       G+    LG+ E+A     KA +I P D +AF
Sbjct: 456 EAIASYDKALEIKPDDDAAWYNRGYSLRNLGRWEEAIASYNKALEIIPDDDEAF 509



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 71/298 (23%), Positives = 122/298 (40%), Gaps = 52/298 (17%)

Query: 122 RIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDS 181
           + D HE   W  +G  L   G +E+A ++F   LE   D   A   +     N GR  ++
Sbjct: 232 KADYHE--AWNNRGNALGNLGRLEEAIASFDKALEFKADYHEAWNNRGNALGNLGRLEEA 289

Query: 182 LEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV--ALAV 239
           +  + +AL+       A     G+   KLG+L +A  ++ +AL++ P++ EA     +A+
Sbjct: 290 IASFDKALEFKADYHQAWN-NRGITLGKLGRLEEALASYDKALEIKPDD-EAWYNRGIAL 347

Query: 240 MDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTN 299
             L   E A     +    +A EI                                    
Sbjct: 348 GKLGRWEEA-----LASFDKALEI------------------------------------ 366

Query: 300 HGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFR 359
             P K  ++YN   +    G +E+A   Y  +++ I  P +  +   G+    L  G   
Sbjct: 367 -KPDKDEAWYNRGIALDDLGRWEEAIASYDKALEII--PDDAAWNNRGIALGNL--GRLE 421

Query: 360 SALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 417
            A+ +++K LEI PD+ E+    G   + LG++E+A     KA +I P D  A+ + G
Sbjct: 422 EAIASYDKALEIKPDSYESWYNRGSAMINLGRLEEAIASYDKALEIKPDDDAAWYNRG 479



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 100/392 (25%), Positives = 156/392 (39%), Gaps = 40/392 (10%)

Query: 113 ATQYYNKA--SRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQAC 170
           A   Y+KA   + D HE   W  +G  L   G  E+A ++F   LE   D+  A   +  
Sbjct: 51  AIASYDKALEFKPDYHE--AWNNRGNALGNLGRWEEAIASFDKALEFKPDDDVAWYNRGI 108

Query: 171 VEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPEN 230
              N GR+ + +  Y + L++ P    A     G+  + LG L +A  ++ +AL+  P+ 
Sbjct: 109 GLGNLGRWEEGIASYNKTLEIKPDYHKAW-YNRGIALHNLGLLEEAIASYDKALEFKPDY 167

Query: 231 VEAL----VALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANH-----FFFT 281
            EA      AL  +       A   K +E      E +    + L  L         F  
Sbjct: 168 HEAWNNRGNALGNLGRWEEAIASYEKVLEFKPDYHEAWNNRGITLGNLGRWEEAIASFDK 227

Query: 282 GQHFLV---EQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA------GLYYMASV 332
              F     E       A+ N G  +  +  +  ++   K DY +A       L  +  +
Sbjct: 228 ALEFKADYHEAWNNRGNALGNLGRLE-EAIASFDKALEFKADYHEAWNNRGNALGNLGRL 286

Query: 333 KE----INKPHEFIFPYY----GLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGH 384
           +E     +K  EF   Y+      G    KLG    AL +++K LEI PD+ E     G 
Sbjct: 287 EEAIASFDKALEFKADYHQAWNNRGITLGKLGRLEEALASYDKALEIKPDD-EAWYNRGI 345

Query: 385 IYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGE 444
              +LG+ E+A     KA +I P   +A+ + G   I+ D    L  ++ A     KA E
Sbjct: 346 ALGKLGRWEEALASFDKALEIKPDKDEAWYNRG---IALDD---LGRWEEAIASYDKALE 399

Query: 445 EVPIE-VLNNIGVIHFEKGEFESAHQSFKDAL 475
            +P +   NN G+     G  E A  S+  AL
Sbjct: 400 IIPDDAAWNNRGIALGNLGRLEEAIASYDKAL 431



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 85/359 (23%), Positives = 139/359 (38%), Gaps = 35/359 (9%)

Query: 127 EPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYK 186
           EP     +G  L   G  E+A +++   LE   D   A   +     N GR+ +++  + 
Sbjct: 31  EPQACYDRGVALGNSGRWEEAIASYDKALEFKPDYHEAWNNRGNALGNLGRWEEAIASFD 90

Query: 187 RALQVHPSCPGAI-RLGIGLCRYKLGQLGKARQAFQRALQLDPENVEAL----VALAVMD 241
           +AL+  P    A    GIGL    LG+  +   ++ + L++ P+  +A     +AL  + 
Sbjct: 91  KALEFKPDDDVAWYNRGIGLG--NLGRWEEGIASYNKTLEIKPDYHKAWYNRGIALHNLG 148

Query: 242 LQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG 301
           L       + + +    +A E  P    A N   N     G+    E+   +   V    
Sbjct: 149 L-------LEEAIASYDKALEFKPDYHEAWNNRGNALGNLGR---WEEAIASYEKVLEFK 198

Query: 302 PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYY----GLGQVQLKLGD 357
           P    ++ N   +  + G +E+A       +   +K  EF   Y+      G     LG 
Sbjct: 199 PDYHEAWNNRGITLGNLGRWEEA-------IASFDKALEFKADYHEAWNNRGNALGNLGR 251

Query: 358 FRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 417
              A+ +F+K LE   D  E     G+    LG++E+A     KA +      QA+ + G
Sbjct: 252 LEEAIASFDKALEFKADYHEAWNNRGNALGNLGRLEEAIASFDKALEFKADYHQAWNNRG 311

Query: 418 ELLISSDTGAALDAFKTARTLLKKAGEEVP-IEVLNNIGVIHFEKGEFESAHQSFKDAL 475
             L        L   + A     KA E  P  E   N G+   + G +E A  SF  AL
Sbjct: 312 ITL------GKLGRLEEALASYDKALEIKPDDEAWYNRGIALGKLGRWEEALASFDKAL 364



 Score = 43.9 bits (102), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 37/147 (25%), Positives = 64/147 (43%), Gaps = 14/147 (9%)

Query: 84  AILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGE 143
           A  N  G+    LG++E            A   Y+KA  I      +W  +G  ++  G 
Sbjct: 405 AAWNNRGIALGNLGRLEE-----------AIASYDKALEIKPDSYESWYNRGSAMINLGR 453

Query: 144 VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGI 203
           +E+A +++   LE   D+  A   +     N GR+ +++  Y +AL++ P    A     
Sbjct: 454 LEEAIASYDKALEIKPDDDAAWYNRGYSLRNLGRWEEAIASYNKALEIIPDDDEAFY--N 511

Query: 204 GLCRYKL-GQLGKARQAFQRALQLDPE 229
             C Y L  Q  +A    Q+A+ L+P+
Sbjct: 512 KACCYALQSQSDQAIHNLQQAINLNPD 538


>gi|406955606|gb|EKD84014.1| hypothetical protein ACD_39C00303G0002, partial [uncultured
           bacterium]
          Length = 675

 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 148/709 (20%), Positives = 281/709 (39%), Gaps = 85/709 (11%)

Query: 89  LGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQAS 148
           LGV Y  L +I+   +E E    L  Q Y     +           G     KGE  +A 
Sbjct: 13  LGVAYYQLNRIDEALKEWEIAVSLDPQNYEVLHNL-----------GIAYYNKGEDSKAI 61

Query: 149 SAFKIVLEADRDNVPAL---LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGL 205
             ++  LE  R + P +   LG A   +N G+   ++  +++A  ++P     I   +G+
Sbjct: 62  DYWEKCLEV-RSHDPEIHFKLGIAY--YNLGKEDQAISLWEKAANLNPD-DSDIFFRLGV 117

Query: 206 CRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYP 265
             Y  G   K+  AF ++++L+P+N EA   LA++  +       ++ +++ ++A  + P
Sbjct: 118 AYYNKGLDDKSVIAFSKSIELNPKNSEAHNNLAIVFYRL---EMYQQAIDEWKKALALSP 174

Query: 266 YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAG 325
                 N L N +    QH    +  ET   + +  P  S  Y+ L  +Y    D EKA 
Sbjct: 175 RQPEIFNNLGNAYSKLNQH---REAIETWQKILDLTPENSEVYFKLGSAYGKLDDLEKAI 231

Query: 326 LYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 385
             +   +  +N P++ I  ++ LG  Q   G+F+ A+T +  V E   ++ +  + +G+ 
Sbjct: 232 KSWEKCIS-LN-PND-IEAHFNLGVAQYNSGNFQKAITYWTTVREKRSEDADICEKIGNA 288

Query: 386 YVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEE 445
           Y  L    +A +   +A      D Q    LG  +  S      +A    +  ++   + 
Sbjct: 289 YCGLEDFAEAAKFWNRAISYVSDDPQLHHKLG--IAYSKLNKTQEAIFQWQKAIEIDSDH 346

Query: 446 VPIEVLNNIGVIHFEKGEFESAHQSFKDALGDG-----IWLTLLDSKTKTYVIDASASML 500
              E  +N+G+ ++    F+ A   ++ A         ++  L  +  +   +D++ S  
Sbjct: 347 --FEAHHNLGIAYYNLQRFDEALNEWEKAKAQNPTDPDLYFKLGHAYRQKRKLDSAISSW 404

Query: 501 QFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQ---IHDTVAASVLYRLILFKYQD 557
           +                +EL  N     F L    ++   I D + A   +R +     +
Sbjct: 405 K--------------RTIELDPNNPNTHFVLGNAYDEKGLIDDAILA---WRKVCELAPN 447

Query: 558 YVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF- 616
            VDA+  L      +N    +I    +A+++  +     + LG   +K + + KA E + 
Sbjct: 448 DVDAHNNLGIAYFQKNMFDQAISEWEDAIRITPENGELYNKLGIAYIKLELFDKAVECWE 507

Query: 617 RAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLY 676
           +A     +  D  + L+        A  N +          +KA E++ RVI  +  +  
Sbjct: 508 KALKYKPEDADILSNLA-------TAYHNREM--------YDKAIEIWKRVIKYNPQDSE 552

Query: 677 AANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKM 736
           A N  G+    KG +D + DL+ +  E             + N+    F +G    A+  
Sbjct: 553 ARNKLGIAYYNKGMYDQAIDLWKKAIELNPKDAA-----AYYNIGTEEFEKGRINEAITA 607

Query: 737 YQNCLR---KFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPS 782
           Y   L    KF      Q+   LA  +    Q++D   +  R ++  P+
Sbjct: 608 YMKVLEIDPKF-----IQVYYNLAVIYARKRQFRDAVDAARRFLNHTPT 651



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 93/438 (21%), Positives = 176/438 (40%), Gaps = 60/438 (13%)

Query: 200 RLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQR 259
           R  +G+  Y+L ++ +A + ++ A+ LDP+N E L  L +      E +   K ++  ++
Sbjct: 10  RFKLGVAYYQLNRIDEALKEWEIAVSLDPQNYEVLHNLGIAYYNKGEDS---KAIDYWEK 66

Query: 260 AFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 319
             E+  +       L   ++  G+      L E A    N  P  S  ++ L  +Y++KG
Sbjct: 67  CLEVRSHDPEIHFKLGIAYYNLGKEDQAISLWEKA---ANLNPDDSDIFFRLGVAYYNKG 123

Query: 320 DYEKAGLYYMASVKEINKPHE------FIF--------------------P-----YYGL 348
             +K+ + +  S++   K  E       +F                    P     +  L
Sbjct: 124 LDDKSVIAFSKSIELNPKNSEAHNNLAIVFYRLEMYQQAIDEWKKALALSPRQPEIFNNL 183

Query: 349 GQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPR 408
           G    KL   R A+  ++K+L++ P+N E    LG  Y +L  +EKA +   K   ++P 
Sbjct: 184 GNAYSKLNQHREAIETWQKILDLTPENSEVYFKLGSAYGKLDDLEKAIKSWEKCISLNPN 243

Query: 409 DAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAH 468
           D +A  +LG  +   ++G    A     T+ +K  E+   ++   IG  +    +F  A 
Sbjct: 244 DIEAHFNLG--VAQYNSGNFQKAITYWTTVREKRSEDA--DICEKIGNAYCGLEDFAEAA 299

Query: 469 QSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFH---RFENDGNHVELPWNKV 525
           + +  A+       + D     + +  + S L      +F      E D +H E   N  
Sbjct: 300 KFWNRAIS-----YVSDDPQLHHKLGIAYSKLNKTQEAIFQWQKAIEIDSDHFEAHHNLG 354

Query: 526 TVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDA--YLRLAAIAKARNNLQLSIELVN 583
              +NL R  E +++   A         K Q+  D   Y +L    + +  L  +I    
Sbjct: 355 IAYYNLQRFDEALNEWEKA---------KAQNPTDPDLYFKLGHAYRQKRKLDSAISSWK 405

Query: 584 EALKVNGKYPNALSMLGD 601
             ++++   PN   +LG+
Sbjct: 406 RTIELDPNNPNTHFVLGN 423



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 81/349 (23%), Positives = 147/349 (42%), Gaps = 37/349 (10%)

Query: 89  LGVYYTYLGK-----------IETKQREKEEHFILATQYYN------------KASRIDM 125
           LG+ Y+ L K           IE      E H  L   YYN            KA   + 
Sbjct: 319 LGIAYSKLNKTQEAIFQWQKAIEIDSDHFEAHHNLGIAYYNLQRFDEALNEWEKAKAQNP 378

Query: 126 HEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPA--LLGQACVEFNRGRYSDSLE 183
            +P  +   G     K +++ A S++K  +E D +N     +LG A  E  +G   D++ 
Sbjct: 379 TDPDLYFKLGHAYRQKRKLDSAISSWKRTIELDPNNPNTHFVLGNAYDE--KGLIDDAIL 436

Query: 184 FYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQ 243
            +++  ++ P+   A    +G+  ++     +A   ++ A+++ PEN E    L +  ++
Sbjct: 437 AWRKVCELAPNDVDA-HNNLGIAYFQKNMFDQAISEWEDAIRITPENGELYNKLGIAYIK 495

Query: 244 ANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPT 303
                   K +E  ++A +  P  A  L+ LA  +       + ++  E    V  + P 
Sbjct: 496 L---ELFDKAVECWEKALKYKPEDADILSNLATAYH---NREMYDKAIEIWKRVIKYNPQ 549

Query: 304 KSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALT 363
            S +   L  +Y++KG Y++A   +  ++ E+N P +    YY +G  + + G    A+T
Sbjct: 550 DSEARNKLGIAYYNKGMYDQAIDLWKKAI-ELN-PKDAA-AYYNIGTEEFEKGRINEAIT 606

Query: 364 NFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQA 412
            + KVLEI P   +    L  IY +  Q   A +  R+     P   +A
Sbjct: 607 AYMKVLEIDPKFIQVYYNLAVIYARKRQFRDAVDAARRFLNHTPTGVEA 655


>gi|326432559|gb|EGD78129.1| TPR repeat-containing protein [Salpingoeca sp. ATCC 50818]
          Length = 931

 Score = 70.9 bits (172), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 93/372 (25%), Positives = 156/372 (41%), Gaps = 61/372 (16%)

Query: 144 VEQASSAFKIVLEADRDNVPALLGQ---ACVEFNRGRYSDSLEFYKRALQVHPSCPGAIR 200
           +E  +  F  V +A +D + A   Q   A VE  R R  DS + +             + 
Sbjct: 225 IESWAGGFSAVNQAVKDQLRAWCLQKAVAAVEAMRARGEDSTDAF-----------AGLC 273

Query: 201 LGIGLCRYKLGQLGKARQAFQRALQL----DPENVEALVAL-AVMDLQANEAAGIRKGME 255
           L +G      G+  +A   F+ AL +    + E  E + AL   + L  +      K +E
Sbjct: 274 LNVGAVLSDFGEHDRAIAYFETALPIYLRTEGEKGEGVAALYNNLGLAYDNKGKYDKAIE 333

Query: 256 KMQRAFEI--------YPYCAMALNYLANHFFFTGQHFLVEQLTETALAVT-----NHGP 302
             ++A  I        +P  A + N L N +   G++       E ALA+T        P
Sbjct: 334 FYEKALAITVEALGEKHPSTATSYNNLGNAYADKGEYDRAIAYVEKALAITVETVGEKHP 393

Query: 303 TKSHSYYNLARSYHSKGDYEKAGLYYMAS----VKEINKPHEFIFPYY-GLGQVQLKLGD 357
           + + +Y NL  +Y SKGD++KA  +Y  +    V+ + + H      Y  LG      GD
Sbjct: 394 STASTYGNLGNAYDSKGDHDKAVHFYEKALAIKVETLGEKHPSTADTYNNLGGAYDSKGD 453

Query: 358 FRSALTNFEKVLEI--------YPDNCETLKALGHIYVQLGQIEKAQELLRKAAKI---- 405
           ++ A+  +EK L I        +P    T   LG+ Y   G+ ++A +   KA  I    
Sbjct: 454 YKKAIQLYEKALAIQVETLGEKHPSTASTYNNLGNAYASKGEYDRAVQQYEKALAIYAEA 513

Query: 406 ----DPRDAQAFIDLGELLISSDTG---AALDAFKTARTLLKKA-GEEVPIEVLN--NIG 455
                P  A  + +LG  +   + G    A++ ++ A  +  +A GE+ P    +  N+G
Sbjct: 514 LGEKHPSTASTYGNLG--VAYQNKGHYDKAIELYEKALAIRVEALGEKHPSTATSYGNLG 571

Query: 456 VIHFEKGEFESA 467
           V +  KGE++ A
Sbjct: 572 VAYQNKGEYDKA 583



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 113/455 (24%), Positives = 182/455 (40%), Gaps = 87/455 (19%)

Query: 84  AILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMH-----EPSTWVGKGQLL 138
           A+ N LG+ Y   GK +            A ++Y KA  I +       PST      L 
Sbjct: 313 ALYNNLGLAYDNKGKYDK-----------AIEFYEKALAITVEALGEKHPSTATSYNNLG 361

Query: 139 LA---KGEVEQA----SSAFKIVLEADRDNVPAL------LGQACVEFNRGRYSDSLEFY 185
            A   KGE ++A      A  I +E   +  P+       LG A    ++G +  ++ FY
Sbjct: 362 NAYADKGEYDRAIAYVEKALAITVETVGEKHPSTASTYGNLGNAYD--SKGDHDKAVHFY 419

Query: 186 KRALQV--------HPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVAL 237
           ++AL +        HPS        +G      G   KA Q +++AL +  E +      
Sbjct: 420 EKALAIKVETLGEKHPSTADTYN-NLGGAYDSKGDYKKAIQLYEKALAIQVETLGEKHPS 478

Query: 238 AVMDLQANEAAGIRKG-----MEKMQRAFEIY--------PYCAMALNYLANHFFFTGQH 284
                     A   KG     +++ ++A  IY        P  A     L   +   G +
Sbjct: 479 TASTYNNLGNAYASKGEYDRAVQQYEKALAIYAEALGEKHPSTASTYGNLGVAYQNKGHY 538

Query: 285 FLVEQLTETALAV-----TNHGPTKSHSYYNLARSYHSKGDYEKAGLYY----MASVKEI 335
               +L E ALA+         P+ + SY NL  +Y +KG+Y+KA  +Y      +V+ +
Sbjct: 539 DKAIELYEKALAIRVEALGEKHPSTATSYGNLGVAYQNKGEYDKAIEFYEKDLAITVETL 598

Query: 336 NKPHEFIFPYYG-LGQVQLKLGDFRSALTNFEKVLEI--------YPDNCETLKALGHIY 386
            + H      Y  LG+     G +  A+  +E+ L I        +P   +T   LG  Y
Sbjct: 599 GERHPSTADTYNNLGEAYRHKGKYDKAIEFYEQGLAIKVETLGEKHPSTAQTYNNLGIAY 658

Query: 387 VQLGQIEKAQELLRKAAKID--------PRDAQAFIDLGELLISSDTG---AALDAFKTA 435
              G ++KA E   +   I         P  A  + +LG  L   + G    A++ ++ A
Sbjct: 659 DHKGDLDKAVEFYEQGLAIKVETLGEKHPSTASTYNNLG--LAFKNKGHYDKAVEFYEQA 716

Query: 436 RTLLKKA-GEEVPIE--VLNNIGVIHFEKGEFESA 467
           R +  +A GE+ P     L NIG++H ++GE E A
Sbjct: 717 RAVYVEALGEKHPYTAMTLANIGLLHDKRGEKEQA 751


>gi|218438344|ref|YP_002376673.1| hypothetical protein PCC7424_1361 [Cyanothece sp. PCC 7424]
 gi|218171072|gb|ACK69805.1| TPR repeat-containing protein [Cyanothece sp. PCC 7424]
          Length = 1276

 Score = 70.9 bits (172), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 87/325 (26%), Positives = 144/325 (44%), Gaps = 24/325 (7%)

Query: 156 EADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGK 215
           E   + + ALL Q    FN   Y  +L+  ++ L + P+   A   G G+  + LG+  +
Sbjct: 12  EPVNEEIEALLNQGRDHFNAQNYQAALDALEQVLTLEPNKVEAWN-GQGVVLFNLGKHQE 70

Query: 216 ARQAFQRALQLDPENVEALV--ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNY 273
           A Q+F +AL+L+     A     +A++ L   E A     +    +A E+ P  A A   
Sbjct: 71  ALQSFNKALELNSNEANAWNYRGVALLHLGKYEEA-----LSTFDKALELNPNYAEA--- 122

Query: 274 LANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK 333
           L+N  F  G+    ++   T        P  + + +N   +      Y++A   Y  ++ 
Sbjct: 123 LSNRGFVLGKLERYQEALPTFDKALELNPNYAEALFNRGVALERLERYQEAFQSYDKAL- 181

Query: 334 EINKPHEFIFPYYG--LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQ 391
           E+N  +   + Y G  LG    KL  ++ AL  F+K LE+ P+N E     G   V L +
Sbjct: 182 ELNPNNAVAWNYRGVALG----KLERYQEALPTFDKALELNPNNAEVWFNRGVALVNLER 237

Query: 392 IEKAQELLRKAAKIDPRDAQAFIDLGELLISSDT-GAALDAFKTARTLLKKAGEEVPIEV 450
            ++A +   KA K++P   +A+   G  L S +    AL+AF  AR L     E      
Sbjct: 238 YQEALQSYEKALKLNPNYGEAWNYRGVALESLERYQEALEAFDKARELNPNNAES----- 292

Query: 451 LNNIGVIHFEKGEFESAHQSFKDAL 475
            NN GV   +   ++ A QS+  A+
Sbjct: 293 WNNRGVALEKLERYQEAFQSYDQAI 317



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 91/400 (22%), Positives = 173/400 (43%), Gaps = 54/400 (13%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
           A Q +NKA  ++ +E + W  +G  LL  G+ E+A S F   LE + +   AL  +  V 
Sbjct: 71  ALQSFNKALELNSNEANAWNYRGVALLHLGKYEEALSTFDKALELNPNYAEALSNRGFVL 130

Query: 173 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 232
               RY ++L  + +AL+++P+   A+    G+   +L +  +A Q++ +AL+L+P N  
Sbjct: 131 GKLERYQEALPTFDKALELNPNYAEAL-FNRGVALERLERYQEAFQSYDKALELNPNNAV 189

Query: 233 AL----VALA--------------VMDLQANEAA-----GI--------RKGMEKMQRAF 261
           A     VAL                ++L  N A      G+        ++ ++  ++A 
Sbjct: 190 AWNYRGVALGKLERYQEALPTFDKALELNPNNAEVWFNRGVALVNLERYQEALQSYEKAL 249

Query: 262 EIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDY 321
           ++ P    A NY         ++   ++  E         P  + S+ N   +      Y
Sbjct: 250 KLNPNYGEAWNYRGVALESLERY---QEALEAFDKARELNPNNAESWNNRGVALEKLERY 306

Query: 322 EKAGLYYMASVK-EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLK 380
           ++A   Y  +++  +N    +    + LG    KL  +  A  +F++ +++ P+  E   
Sbjct: 307 QEAFQSYDQAIQLNLNDAQAWYNRGFPLG----KLERYEEAFQSFDQAIKLNPNYAEAWN 362

Query: 381 ALGHIYVQLGQIEKAQELLR---KAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTART 437
             G   + LG +E+ +E  +   +A K++P  A+A+ + G  L        L+ ++ A  
Sbjct: 363 YRG---LALGNLERYEEAFQSYDQAIKLNPNYAEAWYNQGVAL------GMLERYEEAFQ 413

Query: 438 LLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDAL 475
              +A +  P   +  NN GV       +E A QSF  A+
Sbjct: 414 FYDQAIKLNPNHAQAWNNRGVALGNLERYEEAFQSFDKAI 453



 Score = 56.2 bits (134), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 96/404 (23%), Positives = 170/404 (42%), Gaps = 52/404 (12%)

Query: 108 EHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLG 167
           E +  A Q Y KA +++ +    W  +G  L +    ++A  AF    E + +N  +   
Sbjct: 236 ERYQEALQSYEKALKLNPNYGEAWNYRGVALESLERYQEALEAFDKARELNPNNAESWNN 295

Query: 168 QACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLD 227
           +        RY ++ + Y +A+Q++ +   A     G    KL +  +A Q+F +A++L+
Sbjct: 296 RGVALEKLERYQEAFQSYDQAIQLNLNDAQAW-YNRGFPLGKLERYEEAFQSFDQAIKLN 354

Query: 228 PENVEALV--ALAVMDLQANEAA---------------------GIRKGM-EKMQRAFEI 263
           P   EA     LA+ +L+  E A                     G+  GM E+ + AF+ 
Sbjct: 355 PNYAEAWNYRGLALGNLERYEEAFQSYDQAIKLNPNYAEAWYNQGVALGMLERYEEAFQF 414

Query: 264 Y-------PYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYH 316
           Y       P  A A N   N     G     E+  ++        P  + ++YN   +  
Sbjct: 415 YDQAIKLNPNHAQAWN---NRGVALGNLERYEEAFQSFDKAIKLNPNHAEAWYNQGVALG 471

Query: 317 SKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNC 376
               Y++A   Y  ++K +N    +   +Y  G    KL  ++ AL ++++ +++ P+  
Sbjct: 472 KLERYQEALQSYDQAIK-LNP--NYAEAWYNQGVALGKLERYQEALQSYDQAIKLNPNYA 528

Query: 377 ETLKALGHIYVQLGQIEKAQELLR---KAAKIDPRDAQAFIDLGELLISSDTGAALDAFK 433
           E     G     LG +E  QE  +   KA +++P DA+A+ + G  L +      L+ ++
Sbjct: 529 EAWYNRG---FALGNLECYQEAFQSFDKAIQLNPNDAEAWNNRGFSLRN------LERYQ 579

Query: 434 TARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDAL 475
            A     KA +  P   E L N GV       +E A QSF  A+
Sbjct: 580 EALQSYDKAIQLNPNYAEALFNRGVALERLERYEEAFQSFDKAI 623



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 71/327 (21%), Positives = 135/327 (41%), Gaps = 54/327 (16%)

Query: 108 EHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLG 167
           E +  A Q+Y++A +++ +    W  +G  L      E+A  +F   ++ + ++  A   
Sbjct: 406 ERYEEAFQFYDQAIKLNPNHAQAWNNRGVALGNLERYEEAFQSFDKAIKLNPNHAEAWYN 465

Query: 168 QACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLD 227
           Q        RY ++L+ Y +A++++P+   A     G+   KL +  +A Q++ +A++L+
Sbjct: 466 QGVALGKLERYQEALQSYDQAIKLNPNYAEAW-YNQGVALGKLERYQEALQSYDQAIKLN 524

Query: 228 PENVEALV--ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 285
           P   EA      A+ +L+  + A      +   +A ++ P  A A N             
Sbjct: 525 PNYAEAWYNRGFALGNLECYQEA-----FQSFDKAIQLNPNDAEAWN------------- 566

Query: 286 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 345
                             +  S  NL R   +   Y+KA          I     +    
Sbjct: 567 -----------------NRGFSLRNLERYQEALQSYDKA----------IQLNPNYAEAL 599

Query: 346 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRK--AA 403
           +  G    +L  +  A  +F+K +++ P+N E     G   V LG++E+ QE +     A
Sbjct: 600 FNRGVALERLERYEEAFQSFDKAIQLNPNNTEAWYNRG---VVLGKLERHQEAIASYDQA 656

Query: 404 KIDPRDAQ-AFIDLGELLISSDTGAAL 429
            +  RD   A+I+ G L+ S  +G  L
Sbjct: 657 LVIKRDFYLAWINRGNLIYSLSSGNFL 683



 Score = 44.3 bits (103), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 52/199 (26%), Positives = 87/199 (43%), Gaps = 14/199 (7%)

Query: 345 YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAK 404
           + G G V   LG  + AL +F K LE+  +        G   + LG+ E+A     KA +
Sbjct: 55  WNGQGVVLFNLGKHQEALQSFNKALELNSNEANAWNYRGVALLHLGKYEEALSTFDKALE 114

Query: 405 IDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKG 462
           ++P  A+A  + G +L        L+ ++ A     KA E  P   E L N GV      
Sbjct: 115 LNPNYAEALSNRGFVL------GKLERYQEALPTFDKALELNPNYAEALFNRGVALERLE 168

Query: 463 EFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKD-MQLFHR-FENDGNHVEL 520
            ++ A QS+  AL     L   ++    Y   A   + ++++ +  F +  E + N+ E+
Sbjct: 169 RYQEAFQSYDKALE----LNPNNAVAWNYRGVALGKLERYQEALPTFDKALELNPNNAEV 224

Query: 521 PWNKVTVLFNLARLLEQIH 539
            +N+   L NL R  E + 
Sbjct: 225 WFNRGVALVNLERYQEALQ 243


>gi|452211222|ref|YP_007491336.1| hypothetical protein MmTuc01_2778 [Methanosarcina mazei Tuc01]
 gi|452101124|gb|AGF98064.1| hypothetical protein MmTuc01_2778 [Methanosarcina mazei Tuc01]
          Length = 1085

 Score = 70.9 bits (172), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 98/386 (25%), Positives = 153/386 (39%), Gaps = 60/386 (15%)

Query: 95  YLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIV 154
           + GK  T    K E +  A   Y+ A  I+      W  KG  L   G+ E+A   ++  
Sbjct: 601 WYGKASTYS--KLEMYEDALHSYDMALAINPVRTEAWYEKGSALDKLGKSEEAMECYQKA 658

Query: 155 LEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLG 214
           L+ D  +  A  G A    + GR  +++ +Y + L+++ +   A++ G  L    LG+  
Sbjct: 659 LDIDPQSSNAWYGMASTSSDLGRAEEAIAYYDQLLKLNSTDSEALQ-GKSLALASLGRYD 717

Query: 215 KARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYL 274
           +A   F   L+L+PENVEAL   A         A  R G  + + A E Y          
Sbjct: 718 EAVACFNPLLELEPENVEALEGRAF--------ALARSG--RPEAALEDYD--------- 758

Query: 275 ANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKE 334
                                 +    PT S +    A      G Y++A L Y   + E
Sbjct: 759 ---------------------VIMKLDPTNSKALAEKASLLEELGRYDEAALTY-GEILE 796

Query: 335 INKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK 394
           I   +  I   Y  G+    +GDF +A+  ++K+L + P N + +   G     L ++EK
Sbjct: 797 ITPENREIM--YRQGKALEAMGDFEAAIACYDKILALDPKNIDAINNKG---FALSKMEK 851

Query: 395 AQELL---RKAAKIDPRDAQA--FIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIE 449
            QE L    KA + DP +  A  F       ISS+  AAL+ F     L         I 
Sbjct: 852 YQEALATYDKALEYDPDNPAAWYFKGCANFAISSNN-AALECFNKTVQLKPDC-----IT 905

Query: 450 VLNNIGVIHFEKGEFESAHQSFKDAL 475
              N G +    G+   +  S++ AL
Sbjct: 906 AWYNKGYLANVLGDVNESINSYESAL 931



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 78/328 (23%), Positives = 126/328 (38%), Gaps = 43/328 (13%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
           A   Y+KA ++D      W  KG      G+ + A  ++   ++ D +   A  G+A   
Sbjct: 410 AVGCYDKALKLDSGYAKVWYKKGYDSSKLGKYKDAVKSYDEAIDLDENYTLAWYGKAFAL 469

Query: 173 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 232
              GRY DS+  Y R L+V P     I    GL   +LG+  +A   + +ALQ+   N  
Sbjct: 470 ARIGRYEDSIVCYDRVLEVAPDS-AEIWYNKGLLLDELGRYQEASDCYSQALQI---NSN 525

Query: 233 ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTE 292
             VA   ++      +G    +    +   I P  A+   + +                 
Sbjct: 526 YSVARFRLNKDIEMLSGNSTSISANNKNTNINPQKAITGGFWS----------------- 568

Query: 293 TALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQ 352
                           Y L+  Y S  D  +       S+K+++    +   +YG     
Sbjct: 569 ----------------YLLSYKYASPDDNTEIS----GSIKDLSPEFGYDEAWYGKASTY 608

Query: 353 LKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQA 412
            KL  +  AL +++  L I P   E     G    +LG+ E+A E  +KA  IDP+ + A
Sbjct: 609 SKLEMYEDALHSYDMALAINPVRTEAWYEKGSALDKLGKSEEAMECYQKALDIDPQSSNA 668

Query: 413 FIDLGELLISSDTGAALDAFKTARTLLK 440
           +  +     SSD G A +A      LLK
Sbjct: 669 WYGMAS--TSSDLGRAEEAIAYYDQLLK 694



 Score = 39.7 bits (91), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 50/231 (21%), Positives = 94/231 (40%), Gaps = 24/231 (10%)

Query: 216 ARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRK---GMEKMQRAFEIYPYCAMALN 272
           A  A    L   P +VE L+       + N+   +++    +E  ++A EI P  +M+  
Sbjct: 3   AASARDEVLSQRPSSVEGLLT------KGNDLYSLKEYELSIECFEKALEIEPNSSMS-- 54

Query: 273 YLANHFFFTGQHFLVEQLTETALAVTNHG----PTKSHSYYNLARSYHSKGDYEKAGLYY 328
                ++  G      +  E ++A  +      P  S S+Y     Y    +Y +A   Y
Sbjct: 55  -----WYGKGCSLSALERYEESIACYDMAIETFPVSSESWYKKGDEYIQTKNYIEAINCY 109

Query: 329 MASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQ 388
             S+   N      F          KLG  + ALT+++  ++   ++ + L+  G  Y Q
Sbjct: 110 EKSLATDNYLSRVWFQ---KATASEKLGLDQEALTSYDTSIQFGANSSKALQMQGKAYAQ 166

Query: 389 LGQIEKAQELLRKAAKIDPRDAQAFIDLGELL-ISSDTGAALDAFKTARTL 438
           L   E+A     +A  + P D + +   G +  +S D  +A++ +  A +L
Sbjct: 167 LENYEEAMNCFNRALNVTPEDFELWNQKGIMYDLSGDYESAIECYDQAISL 217


>gi|386811837|ref|ZP_10099062.1| conserved hypothetical protein [planctomycete KSU-1]
 gi|386404107|dbj|GAB61943.1| conserved hypothetical protein [planctomycete KSU-1]
          Length = 311

 Score = 70.9 bits (172), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 63/254 (24%), Positives = 121/254 (47%), Gaps = 14/254 (5%)

Query: 167 GQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQL 226
           G+A     + R  + +E  K+ L+++P+        +GL   + G L ++  ++++AL+ 
Sbjct: 44  GEAPSVHKKARLDEEIEKNKKLLEINPNDATG-HYNLGLLYEENGMLDESLASYKKALET 102

Query: 227 DPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFL 286
           +P  +EAL+    +    N+     + +   ++A ++ P+ A A   L   +   GQ   
Sbjct: 103 NPSMIEALIGQGNI---LNKKGKSDEAISVFKKAVDMSPHHAEAYEGLGLVYVHKGQ--- 156

Query: 287 VEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYY 346
            E   +  L   +  P   ++ YNL   Y  K  + +A   +  ++ EIN P + I  YY
Sbjct: 157 AEDAVKAFLRAIDINPGLVNARYNLGILYAKKAQFNEAIAEWTKAI-EIN-PQK-IEVYY 213

Query: 347 GLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKID 406
            LG    KLG    A++ ++K L I PD       +G +Y + G  EKA+  L+K  +++
Sbjct: 214 NLGVGYTKLGKMDEAISVWQKALTIRPDMANLHYTIGLVYKEKGDFEKAEASLKKTLEVE 273

Query: 407 PRDAQAFIDLGELL 420
           P     F+++ ++L
Sbjct: 274 PN----FVEVHKVL 283



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 63/264 (23%), Positives = 107/264 (40%), Gaps = 50/264 (18%)

Query: 135 GQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS 194
           G L    G ++++ +++K  LE +   + AL+GQ  +   +G+  +++  +K+A+ + P 
Sbjct: 80  GLLYEENGMLDESLASYKKALETNPSMIEALIGQGNILNKKGKSDEAISVFKKAVDMSPH 139

Query: 195 CPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVM---DLQANEAAGIR 251
              A   G+GL     GQ   A +AF RA+ ++P  V A   L ++     Q NEA    
Sbjct: 140 HAEAYE-GLGLVYVHKGQAEDAVKAFLRAIDINPGLVNARYNLGILYAKKAQFNEA---- 194

Query: 252 KGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNL 311
             + +  +A EI                                      P K   YYNL
Sbjct: 195 --IAEWTKAIEI-------------------------------------NPQKIEVYYNL 215

Query: 312 ARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEI 371
              Y   G  ++A   +    K +    +    +Y +G V  + GDF  A  + +K LE+
Sbjct: 216 GVGYTKLGKMDEAISVWQ---KALTIRPDMANLHYTIGLVYKEKGDFEKAEASLKKTLEV 272

Query: 372 YPDNCETLKALGHIYVQLGQIEKA 395
            P+  E  K L  +Y   G +  A
Sbjct: 273 EPNFVEVHKVLEELYRSKGMLGDA 296



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 47/208 (22%), Positives = 88/208 (42%), Gaps = 41/208 (19%)

Query: 117 YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 176
           Y KA   +       +G+G +L  KG+ ++A S FK  ++    +  A  G   V  ++G
Sbjct: 96  YKKALETNPSMIEALIGQGNILNKKGKSDEAISVFKKAVDMSPHHAEAYEGLGLVYVHKG 155

Query: 177 RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVA 236
           +  D+++ + RA+ ++P    A R  +G+   K  Q  +A   + +A++++P+ +E    
Sbjct: 156 QAEDAVKAFLRAIDINPGLVNA-RYNLGILYAKKAQFNEAIAEWTKAIEINPQKIEVYYN 214

Query: 237 LAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALA 296
           L V         G  K + KM  A  ++                           + AL 
Sbjct: 215 LGV---------GYTK-LGKMDEAISVW---------------------------QKALT 237

Query: 297 VTNHGPTKSHSYYNLARSYHSKGDYEKA 324
           +    P  ++ +Y +   Y  KGD+EKA
Sbjct: 238 IR---PDMANLHYTIGLVYKEKGDFEKA 262


>gi|348526600|ref|XP_003450807.1| PREDICTED: Bardet-Biedl syndrome 4 protein [Oreochromis niloticus]
          Length = 534

 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 65/226 (28%), Positives = 106/226 (46%), Gaps = 13/226 (5%)

Query: 250 IRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYY 309
           I++ +E  Q    + P  A  L  +A   F  G+H    +    A  +  +    SH   
Sbjct: 81  IQQSLELFQSCAILNPNSADNLKQVARSLFLLGKHKAAIEFYHEAARLNENDWEISH--- 137

Query: 310 NLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVL 369
           NL   Y    D++ A  +   ++K INK H+  F    LG+V L  G+   A+  ++K +
Sbjct: 138 NLGLCYFFIKDFKNAEEHLKIALK-INK-HDKTF--MMLGKVHLLAGETDKAIEVYKKAV 193

Query: 370 EIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL-ISSDTGAA 428
           E  P+N E L  LG +++QLG+ +KA E L  A   DP + +A +  G ++    D   A
Sbjct: 194 EFSPENTEILTTLGLLFLQLGKYQKAFEHLGNALTFDPNNYKAILAAGSMMQTHGDFDVA 253

Query: 429 LDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDA 474
           ++ ++ A      A  E P  + NNIG+  F K ++ +A    K A
Sbjct: 254 MNKYRVAAC----AVPESP-PLWNNIGMCFFGKKKYVAAISCLKRA 294



 Score = 44.3 bits (103), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 66/289 (22%), Positives = 119/289 (41%), Gaps = 39/289 (13%)

Query: 585 ALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASD-ATDGKDSYATLSLGNWNYFAAL 643
           ALK+N K+     MLG + L   +  KA E ++ A + + +  +   TL L     F   
Sbjct: 159 ALKIN-KHDKTFMMLGKVHLLAGETDKAIEVYKKAVEFSPENTEILTTLGL----LF--- 210

Query: 644 RNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQE 703
                   L+    +KA E     +    +N  A   AG ++   G FDV+ + +     
Sbjct: 211 --------LQLGKYQKAFEHLGNALTFDPNNYKAILAAGSMMQTHGDFDVAMNKYR---- 258

Query: 704 AASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNT--DAQILLYLARTHY 761
             +     + P +W N+   +F +  +  A+    +CL++ +Y +  D ++L  L   H 
Sbjct: 259 -VAACAVPESPPLWNNIGMCFFGKKKYVAAI----SCLKRAHYLSPFDWKVLYNLGLVHL 313

Query: 762 EAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKF----SASTLQKTRRTADEVRSTVA 817
             +Q+      L  AI+L P    L     VA+       +A+   +   T DE    V 
Sbjct: 314 TMQQYASAFHFLSAAINLNPRMGELYMLLAVALTNLEDVENATRSYEQAVTLDESNPLV- 372

Query: 818 ELENAVRVFSHLSAASNLHLHGFDEKKIN------THVEYCKHLLDAAK 860
            L  A+ +++H      L  +   E+K+N      ++ E+   L+D A+
Sbjct: 373 NLNFAIFLYNHGDKKGALDQYQEMERKVNILRDSSSNFEFDPELMDMAQ 421


>gi|218246150|ref|YP_002371521.1| hypothetical protein PCC8801_1300 [Cyanothece sp. PCC 8801]
 gi|218166628|gb|ACK65365.1| TPR repeat-containing protein [Cyanothece sp. PCC 8801]
          Length = 878

 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 105/434 (24%), Positives = 193/434 (44%), Gaps = 44/434 (10%)

Query: 51  FKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNA-LGVYYTYLGKIETKQREKEEH 109
           +KQGK+E+                 A   Y++   LN  L   Y  LG   + Q +++E 
Sbjct: 244 YKQGKLEE-----------------AIAAYQKAIQLNPNLAEAYNNLGVALSDQGKRDE- 285

Query: 110 FILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQA 169
              A   Y KA +++ +    +   G  L  +G+ ++A +A++  ++ + +   A     
Sbjct: 286 ---AIAAYQKAIQLNPNLAEAYNNLGVALSDQGKRDEAIAAYQKAIQLNPNFALAYNNLG 342

Query: 170 CVEFNRGRYSDSLEFYKRALQVHPSCPGAIR-LGIGLCRYKLGQLGKARQAFQRALQLDP 228
               ++G+  +++  Y++A+Q++P+   A   LG+ L     G+  +A  A+Q+A+QL+P
Sbjct: 343 VALSDQGKRDEAIAAYQKAIQLNPNFALAYNNLGVALS--DQGKRDEAIAAYQKAIQLNP 400

Query: 229 ENVEALVALAVMDLQANEAAGIR-KGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLV 287
               A   L V    A    G R + +   Q+A ++ P  A A N L        Q    
Sbjct: 401 NFALAYNNLGV----ALRNQGKRDEAIAAYQKAIQLDPNDANAYNNLG--LALRNQGKRD 454

Query: 288 EQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYG 347
           E +T    A+    P  + +Y NL  + +S+G  E+A   Y    K I     F   Y  
Sbjct: 455 EAITAYQKAIQ-LNPNFALAYNNLGNALYSQGKREEAIAAYQ---KAIQLNPNFALAYNN 510

Query: 348 LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 407
           LG      G    A+  ++K +++ P+       LG+     G++ +A    +KA +++P
Sbjct: 511 LGNALSDQGKRDEAIAAYQKAIQLNPNFALAYNNLGNALSDQGKLNEAIATYQKAIQLNP 570

Query: 408 RDAQAFIDLGELLISSDTGA---ALDAFKTARTLLKKAG-EEVPIEVL--NNIGVIHFEK 461
             A A+ +LG  L   D G    A+ A++ A +L +           L  NN+G+++  +
Sbjct: 571 NFALAYNNLGNAL--KDQGKLNEAIAAYQKALSLPEDTSVTPTTAHTLAHNNLGLVYQPQ 628

Query: 462 GEFESAHQSFKDAL 475
           G+ E A + ++ AL
Sbjct: 629 GKLEEALREYEAAL 642



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 92/394 (23%), Positives = 172/394 (43%), Gaps = 50/394 (12%)

Query: 117 YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 176
           Y KA ++D ++ + +   G  L  +G++E+A +A++  ++ + +   A         ++G
Sbjct: 222 YQKAIQLDPNDANAYNNLGAALYKQGKLEEAIAAYQKAIQLNPNLAEAYNNLGVALSDQG 281

Query: 177 RYSDSLEFYKRALQVHPSCPGAI-RLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV 235
           +  +++  Y++A+Q++P+   A   LG+ L     G+  +A  A+Q+A+QL+P    A  
Sbjct: 282 KRDEAIAAYQKAIQLNPNLAEAYNNLGVALS--DQGKRDEAIAAYQKAIQLNPNFALAYN 339

Query: 236 ALAVMDLQANEAAGIR-KGMEKMQRAFEIYPYCAMALNYLANHFFFTGQ--------HFL 286
            L V    A    G R + +   Q+A ++ P  A+A N L       G+           
Sbjct: 340 NLGV----ALSDQGKRDEAIAAYQKAIQLNPNFALAYNNLGVALSDQGKRDEAIAAYQKA 395

Query: 287 VEQLTETALAVTNHG-----------------------PTKSHSYYNLARSYHSKGDYEK 323
           ++     ALA  N G                       P  +++Y NL  +  ++G  ++
Sbjct: 396 IQLNPNFALAYNNLGVALRNQGKRDEAIAAYQKAIQLDPNDANAYNNLGLALRNQGKRDE 455

Query: 324 AGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALG 383
           A   Y    K I     F   Y  LG      G    A+  ++K +++ P+       LG
Sbjct: 456 AITAYQ---KAIQLNPNFALAYNNLGNALYSQGKREEAIAAYQKAIQLNPNFALAYNNLG 512

Query: 384 HIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAG 443
           +     G+ ++A    +KA +++P  A A+ +LG  L  SD G   +A  T     +KA 
Sbjct: 513 NALSDQGKRDEAIAAYQKAIQLNPNFALAYNNLGNAL--SDQGKLNEAIAT----YQKAI 566

Query: 444 EEVPIEVL--NNIGVIHFEKGEFESAHQSFKDAL 475
           +  P   L  NN+G    ++G+   A  +++ AL
Sbjct: 567 QLNPNFALAYNNLGNALKDQGKLNEAIAAYQKAL 600



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 68/274 (24%), Positives = 120/274 (43%), Gaps = 17/274 (6%)

Query: 204 GLCRYKLGQLGKARQAFQRALQLDPENVEALVALA-VMDLQANEAAGIRKGMEKMQRAFE 262
           G    K+G+  +A   F+R ++LDP   +A   L   +  Q      + + +   Q+A +
Sbjct: 36  GRTAGKMGKYTEAEAIFRRVIELDPNLADAYNNLGNALYYQGK----LDEAIAAYQKAIQ 91

Query: 263 IYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYE 322
           + P  A A N L N     G+   +E+            P  + +YYNL  +   +G  E
Sbjct: 92  LNPNDADAYNNLGNALSDQGK---LEEAIAAYQKAIQLNPNYADAYYNLGIALSDQGKLE 148

Query: 323 KAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKAL 382
           +A   Y    K I     F   YY LG      G    A+  ++K +++ P+  +    L
Sbjct: 149 EAIAAYQ---KAIQLNPNFTQAYYNLGIALSDQGKLEEAIAAYQKAIQLNPNYADAYYNL 205

Query: 383 GHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKK 441
           G+     G++++A    +KA ++DP DA A+ +LG  L        A+ A++ A  L   
Sbjct: 206 GNALFDQGKLDEAIAAYQKAIQLDPNDANAYNNLGAALYKQGKLEEAIAAYQKAIQLNPN 265

Query: 442 AGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
                  E  NN+GV   ++G+ + A  +++ A+
Sbjct: 266 LA-----EAYNNLGVALSDQGKRDEAIAAYQKAI 294



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 98/422 (23%), Positives = 184/422 (43%), Gaps = 48/422 (11%)

Query: 59  FRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYN 118
           FR+++E      +D   AD         N LG    Y GK++            A   Y 
Sbjct: 52  FRRVIE------LDPNLADA-------YNNLGNALYYQGKLDE-----------AIAAYQ 87

Query: 119 KASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRY 178
           KA +++ ++   +   G  L  +G++E+A +A++  ++ + +   A         ++G+ 
Sbjct: 88  KAIQLNPNDADAYNNLGNALSDQGKLEEAIAAYQKAIQLNPNYADAYYNLGIALSDQGKL 147

Query: 179 SDSLEFYKRALQVHPSCPGA-IRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVAL 237
            +++  Y++A+Q++P+   A   LGI L     G+L +A  A+Q+A+QL+P   +A   L
Sbjct: 148 EEAIAAYQKAIQLNPNFTQAYYNLGIALS--DQGKLEEAIAAYQKAIQLNPNYADAYYNL 205

Query: 238 --AVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETAL 295
             A+ D        + + +   Q+A ++ P  A A N L    +  G+   +E+      
Sbjct: 206 GNALFD-----QGKLDEAIAAYQKAIQLDPNDANAYNNLGAALYKQGK---LEEAIAAYQ 257

Query: 296 AVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKL 355
                 P  + +Y NL  +   +G  ++A   Y    K I         Y  LG      
Sbjct: 258 KAIQLNPNLAEAYNNLGVALSDQGKRDEAIAAYQ---KAIQLNPNLAEAYNNLGVALSDQ 314

Query: 356 GDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFID 415
           G    A+  ++K +++ P+       LG      G+ ++A    +KA +++P  A A+ +
Sbjct: 315 GKRDEAIAAYQKAIQLNPNFALAYNNLGVALSDQGKRDEAIAAYQKAIQLNPNFALAYNN 374

Query: 416 LGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVL--NNIGVIHFEKGEFESAHQSFKD 473
           LG  L  SD G   +A        +KA +  P   L  NN+GV    +G+ + A  +++ 
Sbjct: 375 LGVAL--SDQGKRDEAIAA----YQKAIQLNPNFALAYNNLGVALRNQGKRDEAIAAYQK 428

Query: 474 AL 475
           A+
Sbjct: 429 AI 430


>gi|332707691|ref|ZP_08427719.1| hypothetical protein LYNGBM3L_54490 [Moorea producens 3L]
 gi|332353600|gb|EGJ33112.1| hypothetical protein LYNGBM3L_54490 [Moorea producens 3L]
          Length = 463

 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 63/216 (29%), Positives = 103/216 (47%), Gaps = 12/216 (5%)

Query: 258 QRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHS 317
           ++A E  PY AM    LAN +   G++ L  +  + A+A+    PT S +YYNL  +++ 
Sbjct: 71  RKALEFDPYMAMGRYLLANTYLQQGKNQLALEQYQIAIALD---PTLSQAYYNLGIAFYK 127

Query: 318 KGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCE 377
           +G  + A   Y  ++   N     I  YY LG      G+   A+ +++  + + PD  +
Sbjct: 128 EGAPDSAIAAYRQALS-FNPESADI--YYNLGLALESQGNQEEAIEHYQATIRLDPDYGK 184

Query: 378 TLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLI-SSDTGAALDAFKTAR 436
               +G I V+  QI  A   LR+A +  P+  +A   LG LL+   +  AA ++F+ A 
Sbjct: 185 AYYNMGLILVEQDQIGPATTALRQAVRTQPKLVKAHYQLGLLLVEQGEKSAAEESFREAV 244

Query: 437 TLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFK 472
            +  K     P +    + VI FEKGE   A   F+
Sbjct: 245 KVDPKLA---PAQY--QLAVILFEKGELAEAITRFR 275



 Score = 45.8 bits (107), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 72/297 (24%), Positives = 123/297 (41%), Gaps = 26/297 (8%)

Query: 129 STWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRA 188
           +++   G  L  + +   A  AF+  LE D          A     +G+   +LE Y+ A
Sbjct: 48  ASYFQVGVKLYGRRDFPGAERAFRKALEFDPYMAMGRYLLANTYLQQGKNQLALEQYQIA 107

Query: 189 LQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAV-MDLQANEA 247
           + + P+   A    +G+  YK G    A  A+++AL  +PE+ +    L + ++ Q N+ 
Sbjct: 108 IALDPTLSQAY-YNLGIAFYKEGAPDSAIAAYRQALSFNPESADIYYNLGLALESQGNQ- 165

Query: 248 AGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQ----LTETAL--AVTNHG 301
               + +E  Q    + P    A        ++     LVEQ       TAL  AV    
Sbjct: 166 ---EEAIEHYQATIRLDPDYGKA--------YYNMGLILVEQDQIGPATTALRQAVRTQ- 213

Query: 302 PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFP-YYGLGQVQLKLGDFRS 360
           P    ++Y L      +G+   A   +  +VK   K    + P  Y L  +  + G+   
Sbjct: 214 PKLVKAHYQLGLLLVEQGEKSAAEESFREAVKVDPK----LAPAQYQLAVILFEKGELAE 269

Query: 361 ALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 417
           A+T F  V E+ P+N +  + LG      G+  +A   L+ A ++DP  A    +LG
Sbjct: 270 AITRFRLVTELEPENVDAYRQLGAALTANGEYAEAVTTLKLAVQLDPYHALTHYNLG 326


>gi|338814927|ref|ZP_08626892.1| peptidase C14 caspase catalytic subunit p20 [Acetonema longum DSM
           6540]
 gi|337273094|gb|EGO61766.1| peptidase C14 caspase catalytic subunit p20 [Acetonema longum DSM
           6540]
          Length = 525

 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 78/336 (23%), Positives = 136/336 (40%), Gaps = 21/336 (6%)

Query: 117 YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 176
           YN+A  +D      +  +G +    G+ E A + +   LE D D V A   +  +   + 
Sbjct: 192 YNRAIELDPRSVQVYNSRGLVYAETGKPEAALADYNKALEIDPDYVHAYNNRGDLYQLQK 251

Query: 177 RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVA 236
           RY +++  + +AL+++PS   A     G C Y  G   +A   + +AL +D   + A   
Sbjct: 252 RYGEAIADFNKALELNPSSAAAYDRR-GRCYYAQGNYDQAIADYSKALDIDSRYIHAYNN 310

Query: 237 LAVMDLQANEAAGIR-KGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETAL 295
                  A    G+R + +     A EI P  A+A       ++  G H         AL
Sbjct: 311 RG----NAYSNRGLRDQAIADYSLAIEINPRNAIAYRNRGLVYWTKGMHDQAIADFSQAL 366

Query: 296 AVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINK----PHEFIFPYYGLGQV 351
            +    P    +Y N    Y  KG Y+        S+++ NK      +++F Y   GQ 
Sbjct: 367 ELR---PGFKLAYINRGDVYRDKGRYD-------LSLEDFNKVLTLNSDYVFAYQSRGQT 416

Query: 352 QLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQ 411
              +G++  A+ ++ K L + P   E  K     Y +LG+  +A      A K++P    
Sbjct: 417 YFAMGEYDRAIIDYNKALALKPQVAEVHKNRADAYRKLGKATEAVADYDAALKLNP-GLD 475

Query: 412 AFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP 447
            +I   +  +    G   DA +  +  ++ A  E P
Sbjct: 476 PYIYFYKAALYQQAGFTADAVQNYKLFVEHAPPENP 511



 Score = 48.5 bits (114), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 81/357 (22%), Positives = 138/357 (38%), Gaps = 44/357 (12%)

Query: 134 KGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHP 193
           +G      G+ EQA S F   +  D  +  A L +  + + RG+Y +++  + R++Q+  
Sbjct: 39  RGNFYYIMGQHEQAMSDFSRAIGLDSSHAGAYLQRGNIYYTRGKYVEAIADFTRSIQLDA 98

Query: 194 SCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAG-IRK 252
           + P A         Y  G   +AR+ + +AL     +   ++AL     +A   +G ++ 
Sbjct: 99  ANPKAF--------YSRGLAFRARKMYDQAL----TDFNKVIALNRKYWEAYYQSGLVQA 146

Query: 253 GMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG----PTKSHSY 308
             E  ++A   Y              F  G  F   +  + AL   N      P     Y
Sbjct: 147 SKENYEQAVRDYTKTLELNPRHVPSLFERGNVFFALEQWDQALRDYNRAIELDPRSVQVY 206

Query: 309 YNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLG---QVQLKLGDFRSALTNF 365
            +    Y   G  E A   Y  ++ EI+   +++  Y   G   Q+Q + G+   A+ +F
Sbjct: 207 NSRGLVYAETGKPEAALADYNKAL-EIDP--DYVHAYNNRGDLYQLQKRYGE---AIADF 260

Query: 366 EKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDT 425
            K LE+ P +       G  Y   G  ++A     KA  ID R   A+ + G     S+ 
Sbjct: 261 NKALELNPSSAAAYDRRGRCYYAQGNYDQAIADYSKALDIDSRYIHAYNNRGNAY--SNR 318

Query: 426 GAALDAFKTARTLLKKAGEEVPIEV-------LNNIGVIHFEKGEFESAHQSFKDAL 475
           G    A          A   + IE+         N G++++ KG  + A   F  AL
Sbjct: 319 GLRDQAI---------ADYSLAIEINPRNAIAYRNRGLVYWTKGMHDQAIADFSQAL 366


>gi|428305223|ref|YP_007142048.1| hypothetical protein Cri9333_1649 [Crinalium epipsammum PCC 9333]
 gi|428246758|gb|AFZ12538.1| Tetratricopeptide TPR_1 repeat-containing protein [Crinalium
           epipsammum PCC 9333]
          Length = 832

 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 90/365 (24%), Positives = 159/365 (43%), Gaps = 26/365 (7%)

Query: 117 YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 176
           +++A ++   +   W  KG  L   G  E+A +AF   L+   D+  A   +     + G
Sbjct: 347 FDQALKVKSDQHQAWNNKGNALGKLGRYEEAIAAFDQALKVKPDDHQAWNNKGNALGDLG 406

Query: 177 RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEAL-- 234
           RY ++L  + + L+V P    A     G     LG+  +A  AF +AL++ P+  +A   
Sbjct: 407 RYEEALAAFDQTLKVKPDQHQAWN-NKGNALGDLGRYEEALAAFDQALKVKPDQHQAWNN 465

Query: 235 VALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLT--- 291
             +A+  L  +E A     +    +A ++ P    A N   N     G+    E+     
Sbjct: 466 KGIALGKLGCDEEA-----LAAFDQALKVKPDQHQAWN---NKGIALGKLGCDEEALAAF 517

Query: 292 ETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQV 351
           + AL V +    +  ++ N   +    G  E+A   Y  ++K     HE    +   G  
Sbjct: 518 DQALKVKS---DQHQAWNNKGIALGKLGRDEEALAAYNKALKVKPDQHE---AWKNKGNT 571

Query: 352 QLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQ 411
            + LG ++ AL  F++ L++ PD  +  K  G + V LG  ++A     +A K+ P D +
Sbjct: 572 LVNLGCYQEALAAFDQALKVKPDQHQVWKNKGIVLVNLGCYQEALVAFDQALKVKPNDHE 631

Query: 412 AFIDLGELLIS-SDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQS 470
            + + G +L++      AL AF   +TL  K  +    EV NN G++    G ++ A  +
Sbjct: 632 PWSNKGIVLVNLGRYQEALIAFD--QTLKVKPDQ---YEVWNNKGIVLVNLGRYQEAITA 686

Query: 471 FKDAL 475
           F   L
Sbjct: 687 FDQTL 691



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 96/394 (24%), Positives = 158/394 (40%), Gaps = 50/394 (12%)

Query: 117 YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 176
           +++A ++   +   W  KG  L   G  E+A +AF   L+   D   A   +     + G
Sbjct: 381 FDQALKVKPDDHQAWNNKGNALGDLGRYEEALAAFDQTLKVKPDQHQAWNNKGNALGDLG 440

Query: 177 RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV- 235
           RY ++L  + +AL+V P    A     G+   KLG   +A  AF +AL++ P+  +A   
Sbjct: 441 RYEEALAAFDQALKVKPDQHQAWN-NKGIALGKLGCDEEALAAFDQALKVKPDQHQAWNN 499

Query: 236 -------------ALAVMDL---------QANEAAGIRKG--------MEKMQRAFEIYP 265
                        ALA  D          QA    GI  G        +    +A ++ P
Sbjct: 500 KGIALGKLGCDEEALAAFDQALKVKSDQHQAWNNKGIALGKLGRDEEALAAYNKALKVKP 559

Query: 266 YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAG 325
               A     N     G +       + AL V    P +   + N      + G Y++A 
Sbjct: 560 DQHEAWKNKGNTLVNLGCYQEALAAFDQALKVK---PDQHQVWKNKGIVLVNLGCYQEAL 616

Query: 326 LYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 385
           + +  ++K     HE   P+   G V + LG ++ AL  F++ L++ PD  E     G +
Sbjct: 617 VAFDQALKVKPNDHE---PWSNKGIVLVNLGRYQEALIAFDQTLKVKPDQYEVWNNKGIV 673

Query: 386 YVQLGQIEKAQELLRKAAKIDPRDAQAF----IDLGELLISSDTGAALDAFKTARTLLKK 441
            V LG+ ++A     +  K+ P   + +    I LG+L    +  AA D     +TL  K
Sbjct: 674 LVNLGRYQEAITAFDQTLKVKPDQYEVWNNKGIALGKLGRYQEALAAFD-----QTLKVK 728

Query: 442 AGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
             +    EV NN G+     G ++ A  +F   L
Sbjct: 729 PDQ---YEVWNNKGIALVNLGRYQEAITAFDQTL 759



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 87/371 (23%), Positives = 155/371 (41%), Gaps = 22/371 (5%)

Query: 109 HFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQ 168
           H+  A   +++A ++   +   W  KG  L+     E+A +AF   L+   D+  A   +
Sbjct: 271 HYEEALAAFDQALKVKPDQHQAWYNKGNTLVNLERYEEALAAFDQALKVKPDDHQAWNNK 330

Query: 169 ACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDP 228
             V    GRY ++L  + +AL+V      A     G    KLG+  +A  AF +AL++ P
Sbjct: 331 GNVLGKLGRYEEALAAFDQALKVKSDQHQAWN-NKGNALGKLGRYEEAIAAFDQALKVKP 389

Query: 229 ENVEAL--VALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFL 286
           ++ +A      A+ DL   E A     +    +  ++ P    A N   N     G++  
Sbjct: 390 DDHQAWNNKGNALGDLGRYEEA-----LAAFDQTLKVKPDQHQAWNNKGNALGDLGRYEE 444

Query: 287 VEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYY 346
                + AL V    P +  ++ N   +    G  E+A   +  ++K     H+    + 
Sbjct: 445 ALAAFDQALKVK---PDQHQAWNNKGIALGKLGCDEEALAAFDQALKVKPDQHQ---AWN 498

Query: 347 GLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKID 406
             G    KLG    AL  F++ L++  D  +     G    +LG+ E+A     KA K+ 
Sbjct: 499 NKGIALGKLGCDEEALAAFDQALKVKSDQHQAWNNKGIALGKLGRDEEALAAYNKALKVK 558

Query: 407 PRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPI--EVLNNIGVIHFEKGEF 464
           P   +A+ + G  L++      L  ++ A     +A +  P   +V  N G++    G +
Sbjct: 559 PDQHEAWKNKGNTLVN------LGCYQEALAAFDQALKVKPDQHQVWKNKGIVLVNLGCY 612

Query: 465 ESAHQSFKDAL 475
           + A  +F  AL
Sbjct: 613 QEALVAFDQAL 623


>gi|254442510|ref|ZP_05055986.1| tetratricopeptide repeat domain protein [Verrucomicrobiae bacterium
           DG1235]
 gi|198256818|gb|EDY81126.1| tetratricopeptide repeat domain protein [Verrucomicrobiae bacterium
           DG1235]
          Length = 592

 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 85/339 (25%), Positives = 135/339 (39%), Gaps = 49/339 (14%)

Query: 112 LATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACV 171
           L  QY ++A +I  +  +  V KG+ LL+  + + A  AF+        +  A +G A  
Sbjct: 279 LCKQYLSRAEQIAPNNANVLVEKGRTLLSSQKPKDALRAFEKATAQPNPHEAAYIGLAQA 338

Query: 172 EFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENV 231
             + G+   ++E    A   +P     +   +G       +L  A  AF+RA  L+P N 
Sbjct: 339 TASTGKPKQAIELLVAAETQYPKS-AELLSALGTLYLSQQKLDSALDAFKRAHSLNPRNP 397

Query: 232 EALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANH------FFFTGQHF 285
           +A   L  + L    A G + G+             A   NYL           FT ++ 
Sbjct: 398 QANRNLGTLLL----ARGDKSGL-------------AYTENYLVRQPDDSEVALFTARNL 440

Query: 286 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 345
           L +Q    A A              L RSY S           +AS             Y
Sbjct: 441 LEKQGNPQAAAAL------------LQRSYDSLARPSNELRQLLASS------------Y 476

Query: 346 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKI 405
           + L  +Q        A+ + E+ L I+PDN E L  LG I  QLG  EKA+  L +  + 
Sbjct: 477 HQLSNLQASQKRLAPAIASLEQSLTIWPDNYEALANLGMINAQLGNHEKAESYLLQFTEA 536

Query: 406 DPRDAQAFIDLGEL-LISSDTGAALDAFKTARTLLKKAG 443
            P+D   +++LG++ LI+     A+ A+K   +  +  G
Sbjct: 537 QPQDPNGWLNLGKVYLIAKRLPDAISAWKNGLSQARSQG 575


>gi|124024108|ref|YP_001018415.1| hypothetical protein P9303_24171 [Prochlorococcus marinus str. MIT
           9303]
 gi|123964394|gb|ABM79150.1| Hypothetical protein P9303_24171 [Prochlorococcus marinus str. MIT
           9303]
          Length = 733

 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 81/342 (23%), Positives = 149/342 (43%), Gaps = 22/342 (6%)

Query: 138 LLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPG 197
           L  +G +++A   +  +++A  +N         +    GR+ + +   ++AL++ P+   
Sbjct: 24  LFQEGRIKEAEEIYTRLIKAGTNNHLTYGSLGIIYGIEGRWQELIAILEKALKLEPNYSD 83

Query: 198 AIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKM 257
           A    IG+   +L  L  A ++FQ+AL ++P   ++   L    L   E   +   +  +
Sbjct: 84  AHNY-IGIALKRLDNLEAAVESFQKALSINPNCPKSNYNLGNALL---EEGKLDSAIAFL 139

Query: 258 QRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH---GPTKSHSYYNLARS 314
           + A +  P  + A      H+     +  ++ +      + N     P    ++ +L  +
Sbjct: 140 KTAVDFKPDFSEA------HYNLGIAYLAIDNIAAAINYLNNSLHLKPAFPEAHNSLGLA 193

Query: 315 YHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPD 374
             +KG+     L   + +K +    EF    Y LG + L  GD  +A+  F K L +  +
Sbjct: 194 LQAKGE---KNLAISSFIKALEIKPEFPEACYNLGFIYLNQGDIETAINYFNKALLLKWN 250

Query: 375 NCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGEL-LISSDTGAALDAFK 433
             E L  LG  +   G+I  A    RKA +I     + + +LG + L   +   A++ FK
Sbjct: 251 YPEALNNLGIAFKAKGEISPAINSWRKALEIKTDFPEVYYNLGSIYLDQGNIETAINFFK 310

Query: 434 TARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
            A  L     E  P E LNN+G    EKGE ++A  ++K AL
Sbjct: 311 KALIL----KENYP-EALNNLGNSLQEKGELDAAIAAYKKAL 347



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 80/329 (24%), Positives = 136/329 (41%), Gaps = 44/329 (13%)

Query: 181 SLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVM 240
           ++E +++AL ++P+CP +    +G    + G+L  A    + A+   P+  EA   L + 
Sbjct: 101 AVESFQKALSINPNCPKS-NYNLGNALLEEGKLDSAIAFLKTAVDFKPDFSEAHYNLGIA 159

Query: 241 DLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 300
            L  +  A     +  +  +  + P    A N L       G+  L       AL +   
Sbjct: 160 YLAIDNIAA---AINYLNNSLHLKPAFPEAHNSLGLALQAKGEKNLAISSFIKALEIK-- 214

Query: 301 GPTKSHSYYNLARSYHSKGDYEKAGLYY-MASVKEINKPHEFI----------------- 342
            P    + YNL   Y ++GD E A  Y+  A + + N P                     
Sbjct: 215 -PEFPEACYNLGFIYLNQGDIETAINYFNKALLLKWNYPEALNNLGIAFKAKGEISPAIN 273

Query: 343 -----------FP--YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQL 389
                      FP  YY LG + L  G+  +A+  F+K L +  +  E L  LG+   + 
Sbjct: 274 SWRKALEIKTDFPEVYYNLGSIYLDQGNIETAINFFKKALILKENYPEALNNLGNSLQEK 333

Query: 390 GQIEKAQELLRKAAKIDPRDAQAFIDLGELL-ISSDTGAALDAFKTARTLLKKAGEEVPI 448
           G+++ A    +KA    P   +A  +LG +     D   ++  FK A  L      + P 
Sbjct: 334 GELDAAIAAYKKALNHKPSYREAQNNLGCVYRAQGDLENSIRIFKKALAL----HPDHP- 388

Query: 449 EVLNNIGVIHFEKGEFESAHQSFKDALGD 477
           E+L+N+G    EKG+ E+A  SF +A+ +
Sbjct: 389 EILSNLGTSLEEKGDLEAAISSFNNAISN 417



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 60/234 (25%), Positives = 97/234 (41%), Gaps = 20/234 (8%)

Query: 89  LGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQAS 148
           LG  Y   G IET           A  Y+NKA  +  + P      G    AKGE+  A 
Sbjct: 224 LGFIYLNQGDIET-----------AINYFNKALLLKWNYPEALNNLGIAFKAKGEISPAI 272

Query: 149 SAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRY 208
           ++++  LE   D          +  ++G    ++ F+K+AL +  + P A+   +G    
Sbjct: 273 NSWRKALEIKTDFPEVYYNLGSIYLDQGNIETAINFFKKALILKENYPEALN-NLGNSLQ 331

Query: 209 KLGQLGKARQAFQRALQLDPENVEALVALA-VMDLQANEAAGIRKGMEKMQRAFEIYPYC 267
           + G+L  A  A+++AL   P   EA   L  V   Q +    IR      ++A  ++P  
Sbjct: 332 EKGELDAAIAAYKKALNHKPSYREAQNNLGCVYRAQGDLENSIR----IFKKALALHPDH 387

Query: 268 AMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDY 321
              L+ L       G           A++  ++ PT   ++YNL+    SKGDY
Sbjct: 388 PEILSNLGTSLEEKGDLEAAISSFNNAISNNSNYPT---AHYNLSLCLLSKGDY 438



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 64/258 (24%), Positives = 112/258 (43%), Gaps = 21/258 (8%)

Query: 348 LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 407
           +G    +L +  +A+ +F+K L I P+  ++   LG+  ++ G+++ A   L+ A    P
Sbjct: 88  IGIALKRLDNLEAAVESFQKALSINPNCPKSNYNLGNALLEEGKLDSAIAFLKTAVDFKP 147

Query: 408 RDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESA 467
             ++A  +LG   ++ D  AA   +      LK A    P E  N++G+    KGE   A
Sbjct: 148 DFSEAHYNLGIAYLAIDNIAAAINYLNNSLHLKPA---FP-EAHNSLGLALQAKGEKNLA 203

Query: 468 HQSFKDALGDGIWLTLLDSKTKTYVIDASASM----LQFKDMQLFHRFENDGNHVELPWN 523
             SF  AL           + K    +A  ++    L   D++    + N    + L WN
Sbjct: 204 ISSFIKAL-----------EIKPEFPEACYNLGFIYLNQGDIETAINYFNKA--LLLKWN 250

Query: 524 KVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVN 583
               L NL    +   +   A   +R  L    D+ + Y  L +I   + N++ +I    
Sbjct: 251 YPEALNNLGIAFKAKGEISPAINSWRKALEIKTDFPEVYYNLGSIYLDQGNIETAINFFK 310

Query: 584 EALKVNGKYPNALSMLGD 601
           +AL +   YP AL+ LG+
Sbjct: 311 KALILKENYPEALNNLGN 328



 Score = 46.2 bits (108), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 66/310 (21%), Positives = 115/310 (37%), Gaps = 44/310 (14%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
           A  Y N +  +    P      G  L AKGE   A S+F   LE   +   A      + 
Sbjct: 169 AINYLNNSLHLKPAFPEAHNSLGLALQAKGEKNLAISSFIKALEIKPEFPEACYNLGFIY 228

Query: 173 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 232
            N+G    ++ ++ +AL +  + P A+   +G+     G++  A  ++++AL++  +  E
Sbjct: 229 LNQGDIETAINYFNKALLLKWNYPEALN-NLGIAFKAKGEISPAINSWRKALEIKTDFPE 287

Query: 233 ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTE 292
               L  + L   +   I   +   ++A  +      ALN L N     G+        +
Sbjct: 288 VYYNLGSIYL---DQGNIETAINFFKKALILKENYPEALNNLGNSLQEKGELDAAIAAYK 344

Query: 293 TALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQ 352
            AL   NH P+   +  NL   Y ++GD E                              
Sbjct: 345 KAL---NHKPSYREAQNNLGCVYRAQGDLE------------------------------ 371

Query: 353 LKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQA 412
                  +++  F+K L ++PD+ E L  LG    + G +E A      A   +     A
Sbjct: 372 -------NSIRIFKKALALHPDHPEILSNLGTSLEEKGDLEAAISSFNNAISNNSNYPTA 424

Query: 413 FIDLGELLIS 422
             +L   L+S
Sbjct: 425 HYNLSLCLLS 434


>gi|124026676|ref|YP_001015791.1| hypothetical protein NATL1_19711 [Prochlorococcus marinus str.
           NATL1A]
 gi|123961744|gb|ABM76527.1| Hypothetical protein NATL1_19711 [Prochlorococcus marinus str.
           NATL1A]
          Length = 865

 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 89/358 (24%), Positives = 161/358 (44%), Gaps = 36/358 (10%)

Query: 204 GLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEI 263
           G+    LG+L +A  ++++A+++ P+   A   L  +     +   +++    +++A EI
Sbjct: 85  GVILKDLGKLKEAELSYRKAIEIKPDYANAHYNLGNI---LRDLGQLKEAEISLRKAIEI 141

Query: 264 YPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH---GPTKSHSYYNLARSYHSKGD 320
            P  A+A + L N     G+        E  L++       P  + +Y NL        D
Sbjct: 142 KPDYAVAHSNLGNVLRDLGKS------KEAGLSLRKAIELNPDLAEAYSNLGNVLR---D 192

Query: 321 YEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLK 380
            EK     +++ K I    ++   +Y LG + + L   + A  +  K +E+ PD  E   
Sbjct: 193 LEKLKEAELSTRKAIEIKPDYAVAHYNLGTILIDLDKLKEAELSLRKAIELNPDLAEAYS 252

Query: 381 ALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLK 440
            LG++   LG++++A+   RKA +I P  A+A  +LG +L      + L   K A    +
Sbjct: 253 NLGNVLRDLGKLKEAELSTRKAIEIKPDYAEAHSNLGGIL------SNLGKLKEAEISSR 306

Query: 441 KAGEEVPI--EVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASAS 498
           KA E  P      +N+G I  + G+ + A  S+  AL        + +    ++ DA  S
Sbjct: 307 KAIEIKPDYGVAYSNLGTILKDIGKSQEAFDSYLKALDINPTDYDIYTSISIFLRDADIS 366

Query: 499 M---LQFKDMQLFHRFENDGNHVEL--PWNKV---TVLFNLARLLEQIHDTVAASVLY 548
               L+ K++       ND +H EL  P+N +    +  NLA+L     D+ +AS L+
Sbjct: 367 QLDKLKIKEILNIMLERNDVSHQELFKPFNFLYSNEITINLAKL-----DSDSASDLF 419



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 94/361 (26%), Positives = 153/361 (42%), Gaps = 27/361 (7%)

Query: 280 FTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPH 339
           FT    L E     +++  N          N A  +  KG+  +A  YY   + +  K H
Sbjct: 19  FTVPFALGETKENISISSNNRSKPSKEQIINQAIKFQLKGNISEAAKYYQYFINKGFKDH 78

Query: 340 EFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELL 399
             +F  YG+  +   LG  + A  ++ K +EI PD       LG+I   LGQ+++A+  L
Sbjct: 79  R-VFSNYGV--ILKDLGKLKEAELSYRKAIEIKPDYANAHYNLGNILRDLGQLKEAEISL 135

Query: 400 RKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIGVI 457
           RKA +I P  A A  +LG +L   D G +    K A   L+KA E  P   E  +N+G +
Sbjct: 136 RKAIEIKPDYAVAHSNLGNVL--RDLGKS----KEAGLSLRKAIELNPDLAEAYSNLGNV 189

Query: 458 HFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNH 517
             +  + + A  S + A+       +      T +ID      + K+ +L  R       
Sbjct: 190 LRDLEKLKEAELSTRKAIEIKPDYAVAHYNLGTILIDLD----KLKEAELSLR-----KA 240

Query: 518 VELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQL 577
           +EL  +      NL  +L  +     A +  R  +    DY +A+  L  I      L+ 
Sbjct: 241 IELNPDLAEAYSNLGNVLRDLGKLKEAELSTRKAIEIKPDYAEAHSNLGGILSNLGKLKE 300

Query: 578 SIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGK----DSYATLS 633
           +     +A+++   Y  A S LG + LK  D  K++E F +   A D      D Y ++S
Sbjct: 301 AEISSRKAIEIKPDYGVAYSNLGTI-LK--DIGKSQEAFDSYLKALDINPTDYDIYTSIS 357

Query: 634 L 634
           +
Sbjct: 358 I 358


>gi|356534448|ref|XP_003535766.1| PREDICTED: probable UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase SPINDLY-like [Glycine
           max]
          Length = 929

 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 110/432 (25%), Positives = 183/432 (42%), Gaps = 68/432 (15%)

Query: 100 ETKQREK----EEHFILATQYYNKASRIDMHEPST-WVGKGQLLLA-----KGEVEQASS 149
           E   REK    E  F++ ++     S  D    ST + GK  +L A     + +   A +
Sbjct: 9   ENNGREKKMVGENGFLIVSEPSPAGSGGDGVSVSTRYEGKDDVLFANILRSRNKFVDALA 68

Query: 150 AFKIVLEADRDNVPALLGQA-CVEF-NRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCR 207
            ++ VLE+D  NV AL+G+  C++  N GR   + E +  A+++ P    A+    G+  
Sbjct: 69  LYERVLESDGGNVEALVGKGICLQMQNMGRL--AFESFAEAIRMDPQNACALT-HCGILY 125

Query: 208 YKLGQLGKARQAFQRALQLDPENVEALVALAVM--DLQAN--EAAGIRKGMEKMQRAFEI 263
              G L +A +++Q+ALQ+DP    A   LA++  D+  N   A   ++G++K   A +I
Sbjct: 126 KDEGCLVEAAESYQKALQVDPSYKAAAECLAIVLTDIGTNIKLAGNTQEGIQKYFEALKI 185

Query: 264 YPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEK 323
            P+ A A   L   +    Q+ +     E A    +  P  + +Y N+   Y ++GD E 
Sbjct: 186 DPHYAPAYYNLGVVYSEMMQYDMALTFYEKA---ASERPMYAEAYCNMGVIYKNRGDLEA 242

Query: 324 AGLYY----------------MA--------SVK---EINKPHEF-----------IFPY 345
           A   Y                MA         VK   +IN+   F               
Sbjct: 243 AITCYERCLAVSPNFEIAKNNMAIALTDLGTKVKLEGDINRGVAFYKKALHYNWHYADAM 302

Query: 346 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKI 405
           Y LG    ++  F  A+  +E      P   E    LG IY     ++KA E  + A  I
Sbjct: 303 YNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQLALGI 362

Query: 406 DPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPI--EVLNNIGVIHFEKGE 463
            P  +Q+  +LG   +       +DA   A ++++KA    P   E  NN+GV++ + G+
Sbjct: 363 KPNFSQSLNNLG---VVYTVQGKMDA---AASMIEKAIIANPTYAEAYNNLGVLYRDAGD 416

Query: 464 FESAHQSFKDAL 475
              A  +++  L
Sbjct: 417 ISLAINAYEQCL 428



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 60/262 (22%), Positives = 106/262 (40%), Gaps = 33/262 (12%)

Query: 356 GDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK----AQELLRK---AAKIDPR 408
           G    A  +++K L++ P      + L  +   +G   K     QE ++K   A KIDP 
Sbjct: 129 GCLVEAAESYQKALQVDPSYKAAAECLAIVLTDIGTNIKLAGNTQEGIQKYFEALKIDPH 188

Query: 409 DAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPI--EVLNNIGVIHFEKGEFES 466
            A A+ +LG +       + +  +  A T  +KA  E P+  E   N+GVI+  +G+ E+
Sbjct: 189 YAPAYYNLGVVY------SEMMQYDMALTFYEKAASERPMYAEAYCNMGVIYKNRGDLEA 242

Query: 467 AHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNH--------V 518
           A   ++  L          + +  + I  +   +   D+    + E D N         +
Sbjct: 243 AITCYERCL----------AVSPNFEIAKNNMAIALTDLGTKVKLEGDINRGVAFYKKAL 292

Query: 519 ELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLS 578
              W+    ++NL     ++     A V Y L         +A   L  I K R+NL  +
Sbjct: 293 HYNWHYADAMYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKA 352

Query: 579 IELVNEALKVNGKYPNALSMLG 600
           +E    AL +   +  +L+ LG
Sbjct: 353 VECYQLALGIKPNFSQSLNNLG 374


>gi|401408423|ref|XP_003883660.1| hypothetical protein NCLIV_034150 [Neospora caninum Liverpool]
 gi|325118077|emb|CBZ53628.1| hypothetical protein NCLIV_034150 [Neospora caninum Liverpool]
          Length = 987

 Score = 70.5 bits (171), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 84/368 (22%), Positives = 146/368 (39%), Gaps = 66/368 (17%)

Query: 117 YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 176
           YN   ++   + + W  KG  L A G V +A    +  L  D  N  AL         RG
Sbjct: 172 YNAGLKVYADDANLWNCKGVALRALGRVHEALECCREALRLDPRNTNALNNIGVALKERG 231

Query: 177 RYSDSLEFYKRALQVHPSCPGA-IRLGIGL------------------------------ 205
               ++E Y+ +L  +P  P   + L + L                              
Sbjct: 232 ELLQAVEHYRASLAANPHQPTCRMNLAVALTDLGTKLKQEKKLQAALVCYTEALTADPTY 291

Query: 206 --CRYKLGQL-------GKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEK 256
             C Y LG +         A Q ++ A++++P  VEA           N    + K + K
Sbjct: 292 APCYYNLGVIHAETDDPHTALQMYREAVRINPRYVEAY----------NNMGAVCKNLGK 341

Query: 257 MQRAFEIY-------PYCAMALNYLANHFFFTGQHFLVEQLTETALAVTN----HGPTKS 305
           ++ A   Y       P   ++L+ +A      G      +  + A+++      + P  S
Sbjct: 342 LEDAIAFYEKALACNPNYQLSLSNMAVALTDLGTQQKTFEGAKKAISLYKKALIYNPYYS 401

Query: 306 HSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNF 365
            +YYNL  +Y     ++KA + Y  +V    +  E    Y  +G +     +   A+  +
Sbjct: 402 DAYYNLGVAYADSHKFDKALVNYQLAVAFNPRCAEA---YNNMGVIHKDRENTDQAIVCY 458

Query: 366 EKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDT 425
            K LEI PD  +TL  LG +Y   G+I +A +  ++A +++P  A+A+ +LG  ++  D 
Sbjct: 459 NKALEINPDFSQTLNNLGVLYTCTGKIGEALQFAKRAIEVNPSYAEAYNNLG--VLYRDQ 516

Query: 426 GAALDAFK 433
           G   D+ K
Sbjct: 517 GDIEDSVK 524



 Score = 41.2 bits (95), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 66/266 (24%), Positives = 109/266 (40%), Gaps = 38/266 (14%)

Query: 381 ALGHIYVQLGQIEKAQELL---RKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTART 437
           AL  +  +L Q +K Q  L    +A   DP  A  + +LG  +I ++T    D   TA  
Sbjct: 260 ALTDLGTKLKQEKKLQAALVCYTEALTADPTYAPCYYNLG--VIHAET----DDPHTALQ 313

Query: 438 LLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDALGD-----------GIWLTLL 484
           + ++A    P  +E  NN+G +    G+ E A   ++ AL              + LT L
Sbjct: 314 MYREAVRINPRYVEAYNNMGAVCKNLGKLEDAIAFYEKALACNPNYQLSLSNMAVALTDL 373

Query: 485 DSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAA 544
            ++ KT+   A  ++  +K   +++ + +D              +NL       H    A
Sbjct: 374 GTQQKTFE-GAKKAISLYKKALIYNPYYSDA------------YYNLGVAYADSHKFDKA 420

Query: 545 SVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLEL 604
            V Y+L +       +AY  +  I K R N   +I   N+AL++N  +   L+ LG L  
Sbjct: 421 LVNYQLAVAFNPRCAEAYNNMGVIHKDRENTDQAIVCYNKALEINPDFSQTLNNLGVLYT 480

Query: 605 KNDDWVKAKETFRAASDATDGKDSYA 630
                 K  E  + A  A +   SYA
Sbjct: 481 CTG---KIGEALQFAKRAIEVNPSYA 503


>gi|148264943|ref|YP_001231649.1| hypothetical protein Gura_2904 [Geobacter uraniireducens Rf4]
 gi|146398443|gb|ABQ27076.1| Tetratricopeptide TPR_2 repeat protein [Geobacter uraniireducens
           Rf4]
          Length = 265

 Score = 70.5 bits (171), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 66/249 (26%), Positives = 112/249 (44%), Gaps = 25/249 (10%)

Query: 200 RLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQR 259
           RL  G+   + G+ GKA   F   ++++P+N E    L        E+    + ++ +  
Sbjct: 8   RLAEGISLLETGEYGKAATEFSACIEIEPDNPEGYFCLGE---ALAESGKQDEAIKTITA 64

Query: 260 AFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALA----VTNHGPTKSHSYYNLARSY 315
             E+ P    AL  L + +F  G+H       + A+A    VT+  P ++  Y ++   Y
Sbjct: 65  GLELAPDDVEALTALGDLYFEGGRH-------KDAIACYKKVTDLRPKEADGYVSIGLVY 117

Query: 316 HS---KGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIY 372
           +S     D +KA      S  E++ PH  +F    LG +   LG    A+  + K +EI 
Sbjct: 118 NSLERVDDAQKA----FNSALEVD-PHN-VFALNALGDLYYGLGKNDEAVAAYRKGIEID 171

Query: 373 PDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAF 432
           PD+      LG +Y  LG ++ A++   +A ++DP    +++ LG + I  D     DA 
Sbjct: 172 PDDATAYFNLGDLYYDLGDLDAAEKETLEAIRLDPNFTMSYLTLGNVCI--DQERLTDAV 229

Query: 433 KTARTLLKK 441
           K     LKK
Sbjct: 230 KYFELYLKK 238



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 63/222 (28%), Positives = 96/222 (43%), Gaps = 22/222 (9%)

Query: 103 QREKEEHFILATQYYNKAS-------RIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVL 155
           +R  E   +L T  Y KA+        I+   P  +   G+ L   G+ ++A       L
Sbjct: 7   ERLAEGISLLETGEYGKAATEFSACIEIEPDNPEGYFCLGEALAESGKQDEAIKTITAGL 66

Query: 156 EADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGK 215
           E   D+V AL     + F  GR+ D++  YK+   + P       + IGL    L ++  
Sbjct: 67  ELAPDDVEALTALGDLYFEGGRHKDAIACYKKVTDLRPKEADGY-VSIGLVYNSLERVDD 125

Query: 216 ARQAFQRALQLDPENVEALVALAVM--DLQANE--AAGIRKGMEKMQRAFEIYPYCAMAL 271
           A++AF  AL++DP NV AL AL  +   L  N+   A  RKG+       EI P  A A 
Sbjct: 126 AQKAFNSALEVDPHNVFALNALGDLYYGLGKNDEAVAAYRKGI-------EIDPDDATAY 178

Query: 272 NYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLAR 313
             L + ++  G     E+ T  A+ +    P  + SY  L  
Sbjct: 179 FNLGDLYYDLGDLDAAEKETLEAIRLD---PNFTMSYLTLGN 217


>gi|449274778|gb|EMC83856.1| Tetratricopeptide repeat protein 6, partial [Columba livia]
          Length = 617

 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 81/313 (25%), Positives = 133/313 (42%), Gaps = 42/313 (13%)

Query: 127 EPSTWVGKGQLLLAKGEVEQASSAFKI---VLEADRDNVPALLGQACVEFNRGRY---SD 180
           EPS  V  G++ +   + + A  +FK    +L +    +P     A + +  GR      
Sbjct: 56  EPSALVILGKIQMKANKTKDAVRSFKKAINLLMSSAKILPKTFENAEIYYLTGRCYMEQK 115

Query: 181 SL----EFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVA 236
           SL    + +  A+++H   P A     GLCR +L +  K  Q F RAL L P + +A +A
Sbjct: 116 SLLRARDAFSMAIRLHSHYPDAF-YQRGLCRMQLRK-AKCIQDFNRALALCPSHFQAYMA 173

Query: 237 LAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANH---FFFTG----QHFLVEQ 289
           LA                    R F+    C+ A+  + N    +F+ G    Q+   + 
Sbjct: 174 LATY-------------YGSQGRYFQAILNCSEAIKIIPNSVQAYFYRGILKCQNKTFKA 220

Query: 290 LTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA----GLYYMASVKEINKPHEFIFPY 345
             E    V +   T   +YYN A  YH   D+ KA    G+  +  + E     E  F  
Sbjct: 221 AIEDLSEVIDLNATCILAYYNRAVCYHQIKDFRKALKDYGIILLLELSE-----EIAFKV 275

Query: 346 Y-GLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAK 404
               G + ++LGD+ +A  +F+    + PD+ +  +ALG  Y ++ + E A     +A K
Sbjct: 276 LINRGVLYMELGDYANACEDFKGATLLSPDDSQIFQALGICYYRIHEFEDAVRSFDQALK 335

Query: 405 IDPRDAQAFIDLG 417
           +DP    A+I  G
Sbjct: 336 LDPVSVDAYIGRG 348



 Score = 47.0 bits (110), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 58/288 (20%), Positives = 111/288 (38%), Gaps = 48/288 (16%)

Query: 165 LLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRAL 224
           L+ +  +    G Y+++ E +K A  + P     I   +G+C Y++ +   A ++F +AL
Sbjct: 276 LINRGVLYMELGDYANACEDFKGATLLSPD-DSQIFQALGICYYRIHEFEDAVRSFDQAL 334

Query: 225 QLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLA--------- 275
           +LDP +V+A +      ++  +  G ++  +   RA  + P C  A   LA         
Sbjct: 335 KLDPVSVDAYIGRGNSYMENGDEDGCKQAQKDFLRAIHLNPKCIKARVCLAYNLQVLRKF 394

Query: 276 ----NHFF------------FTGQHFLVEQLTET---------ALAVTNHGPTKSH-SYY 309
               N F             + G+  +  Q+ ET         AL +    P  ++  + 
Sbjct: 395 QRAWNQFTVAICMDPKCLAAYDGRASVCLQMGETFAAFLDTNAALKLATTAPLLTNRGFI 454

Query: 310 N--LARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEK 367
           N  +     +  DY++A          I+    +   Y+    +  +   F  A   + K
Sbjct: 455 NHLMGHLTCAMKDYQQA----------ISVDPNYALAYFNAANIYFQNRQFSQAYCYYSK 504

Query: 368 VLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFID 415
           VL++ P N   +         L   E+A+E   KA  + P  A  + +
Sbjct: 505 VLQLEPRNESAIMNRAVTNTLLNNTEEAKEDFEKAICLCPFSAAVYFN 552


>gi|409993894|ref|ZP_11277020.1| hypothetical protein APPUASWS_22318 [Arthrospira platensis str.
           Paraca]
 gi|291569299|dbj|BAI91571.1| TPR domain protein [Arthrospira platensis NIES-39]
 gi|409935242|gb|EKN76780.1| hypothetical protein APPUASWS_22318 [Arthrospira platensis str.
           Paraca]
          Length = 530

 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 82/338 (24%), Positives = 149/338 (44%), Gaps = 41/338 (12%)

Query: 117 YNKASRIDMHEPSTWV--GKGQLLLAKGEVEQASSAFKIVLEADR------DNVPALLGQ 168
           YN+A  I     S W     G+ L  +G++++A +A++   E +       DN+  LL Q
Sbjct: 25  YNQA--IAESPQSAWYYHNLGEALSQQGKIDEAIAAYRQATELNPNSAWSYDNLGTLLNQ 82

Query: 169 ACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDP 228
                 +G   +++  +++A+++ P         + L   K G+L +A    Q+A++L  
Sbjct: 83  ------QGNLPEAVSCFRKAIELDPDF-SEFYHNLALVLIKEGRLEEAVSLLQKAIELKA 135

Query: 229 ENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVE 288
           ++ E   +L     Q  +     + +   ++  E+ PY        ++ +   GQ   +E
Sbjct: 136 DDAELYHSLGKAYQQQQQ---YSEAVTAYRQGLELNPY-------WSDCYLSLGQ--TLE 183

Query: 289 QLTETALAVTNH------GPTKSHSYYNLARSYHSKGDYEK-AGLYYMASVKEINKPHEF 341
            L ET  A+ ++       P+ S +   L     S+G +E+ A LY    + + N     
Sbjct: 184 ALGETEEAIASYRRSYELNPSLSEALPKLQTVLESQGRWEELATLYRRCCIVDPNSATSH 243

Query: 342 IFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRK 401
            +     G      G    A  +++K LE+ P+  E L+ LG +  QL Q E A ++ +K
Sbjct: 244 KYQ----GTALANSGKLSEAAESYQKALELDPNLVEILQPLGQVLTQLNQWEAAVDIFQK 299

Query: 402 AAKIDPRDAQAFIDLGELLISSD-TGAALDAFKTARTL 438
           A ++DP  A  +  LG+ L   D    AL A+K A  L
Sbjct: 300 ATQVDPNSASFYHQLGQALAKCDRLLEALAAYKRASEL 337



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 73/330 (22%), Positives = 146/330 (44%), Gaps = 16/330 (4%)

Query: 92  YYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAF 151
           YY  LG+  ++Q + +E    A   Y +A+ ++ +   ++   G LL  +G + +A S F
Sbjct: 38  YYHNLGEALSQQGKIDE----AIAAYRQATELNPNSAWSYDNLGTLLNQQGNLPEAVSCF 93

Query: 152 KIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLG 211
           +  +E D D        A V    GR  +++   ++A+++       +   +G    +  
Sbjct: 94  RKAIELDPDFSEFYHNLALVLIKEGRLEEAVSLLQKAIELKAD-DAELYHSLGKAYQQQQ 152

Query: 212 QLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAG-IRKGMEKMQRAFEIYPYCAMA 270
           Q  +A  A+++ L+L+P   +  ++L     Q  EA G   + +   +R++E+ P  + A
Sbjct: 153 QYSEAVTAYRQGLELNPYWSDCYLSLG----QTLEALGETEEAIASYRRSYELNPSLSEA 208

Query: 271 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 330
           L  L       G+   +  L      V  +  T SH Y   A +  + G   +A   Y  
Sbjct: 209 LPKLQTVLESQGRWEELATLYRRCCIVDPNSAT-SHKYQGTALA--NSGKLSEAAESYQK 265

Query: 331 SVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLG 390
           +++      E + P   LGQV  +L  + +A+  F+K  ++ P++      LG    +  
Sbjct: 266 ALELDPNLVEILQP---LGQVLTQLNQWEAAVDIFQKATQVDPNSASFYHQLGQALAKCD 322

Query: 391 QIEKAQELLRKAAKIDPRDAQAFIDLGELL 420
           ++ +A    ++A+++ P       DLG+ L
Sbjct: 323 RLLEALAAYKRASELHPTSTPVLFDLGQAL 352



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 83/362 (22%), Positives = 146/362 (40%), Gaps = 45/362 (12%)

Query: 93  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 152
           Y  LGK   +Q++  E    A   Y +   ++ +    ++  GQ L A GE E+A ++++
Sbjct: 141 YHSLGKAYQQQQQYSE----AVTAYRQGLELNPYWSDCYLSLGQTLEALGETEEAIASYR 196

Query: 153 IVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQ 212
              E +     AL     V  ++GR+ +    Y+R   V P+   + +   G      G+
Sbjct: 197 RSYELNPSLSEALPKLQTVLESQGRWEELATLYRRCCIVDPNSATSHKYQ-GTALANSGK 255

Query: 213 LGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALN 272
           L +A +++Q+AL+LDP  VE L  L  +  Q N+       ++  Q+A ++ P  A   +
Sbjct: 256 LSEAAESYQKALELDPNLVEILQPLGQVLTQLNQ---WEAAVDIFQKATQVDPNSASFYH 312

Query: 273 YLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARS----YH---SKGDYEKAG 325
            L        +  L+E L     A   H PT +   ++L ++    YH   +   Y+KA 
Sbjct: 313 QLGQALAKCDR--LLEALAAYKRASELH-PTSTPVLFDLGQALTKLYHWSEAIATYQKAL 369

Query: 326 LYYMASVKEI---------------------NKPHEFIFP-----YYGLGQVQLKLGDFR 359
                +  EI                     +  HEF  P     Y    Q     G   
Sbjct: 370 YLNPPNQAEIQTHLQEVQDKQRHLDEEIAAYSDSHEF-HPNSSESYEKFAQFLRSKGKIE 428

Query: 360 SALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGEL 419
            A+  F +   + P +      LG+   +  + ++A    +KAA+++P        LGE 
Sbjct: 429 DAIIGFHQACILNPQSAVAHHQLGYTLARGQRWDEAILAYQKAAELNPYSPHVQYHLGEA 488

Query: 420 LI 421
           L+
Sbjct: 489 LV 490


>gi|183221520|ref|YP_001839516.1| hypothetical protein LEPBI_I2138 [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
 gi|189911604|ref|YP_001963159.1| hypothetical protein LBF_2084 [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Ames)']
 gi|167776280|gb|ABZ94581.1| Conserved hypothetical protein containing tetratricopeptide repeat
           (TPR) domains [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167779942|gb|ABZ98240.1| Putative TPR-repeat-containing protein [Leptospira biflexa serovar
           Patoc strain 'Patoc 1 (Paris)']
          Length = 700

 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 110/465 (23%), Positives = 199/465 (42%), Gaps = 68/465 (14%)

Query: 38  APLDLWLI--IAREYFKQGK----VEQFRQILEEGSSPEIDEYYADVRYERIAILNALGV 91
           AP D+ L   +A  Y KQG     + +F+++++   +             + A+L+    
Sbjct: 245 APSDVTLTYNLAISYLKQGNLAEAISEFQKVVQTAPN------------SQTAVLS---- 288

Query: 92  YYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAF 151
            Y +LG I   QRE  +    A  Y+ +  R+   +   +   G + L K   E+A+  F
Sbjct: 289 -YGHLGTI-FYQREDYDR---AEYYFREVIRLKTGDAKAYYNLGLVYLKKKVPEEAAKYF 343

Query: 152 KIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLG 211
           +  L+A+ +        A    + G+ + ++   K+AL + PS   ++   +    YK G
Sbjct: 344 QKALDANANEPEVYRYIADAFLSMGQTNMAITALKKALLLKPSDVDSL-FALAELYYKKG 402

Query: 212 QLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMAL 271
           +L +A   F+R ++L P +  +  A   + +  +E     + +   + A  + P    A 
Sbjct: 403 ELVEAESLFRRIIRLTPGDTYSETAYVNLGIILDEMERYSESIAAFEGALSLNPKNQSAY 462

Query: 272 NYLANHFFFTGQHFL-VEQLTETALAVTNHGPTK--SHSYYNLARSYHSK-GDYEKAGLY 327
             L   +   G+  + +E L ++     NH P++     YY   R Y+    +YE+A  +
Sbjct: 463 YNLGLSYLHAGKPTMAIESLRKSQALDPNHVPSRLAIADYYLENRFYNEAISEYEEAIAW 522

Query: 328 YMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNF---EKVLEIYPDNCETLK--AL 382
                    KP         L + +LKL D      N+   EK+L    +N +  K   L
Sbjct: 523 ---------KPE--------LYEARLKLADVYIQTKNYQAAEKMLVYVLENAKDPKEIKL 565

Query: 383 GHIYVQL--------GQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKT 434
            H  + L        G  +KA+E   +A  IDP D ++ + L ++LI  D+G+ +D  K 
Sbjct: 566 AHRKLALSYASSGNVGSSKKAKEEAFRATHIDPEDMESRLVLSKILI--DSGSLVDREKA 623

Query: 435 ARTLLKKAGEEVPIEVL----NNIGVIHFEKGEFESAHQSFKDAL 475
              L      +V   +     N +GV +F+ GEF+ A  SF+ A+
Sbjct: 624 IEELTVITRSDVTPTISSKAHNYLGVCYFKNGEFKRALSSFQTAI 668



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 79/327 (24%), Positives = 137/327 (41%), Gaps = 22/327 (6%)

Query: 157 ADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKA 216
           +D D   AL     +    GRY +++E  ++A+Q       A    + L     G+  +A
Sbjct: 142 SDEDKSIALTVLGVMYDEAGRYINAIERLEKAIQYDSKNYFAF-YNLSLAFKHAGKFEEA 200

Query: 217 RQAFQRALQLDPENVEALVALAVMDLQAN---EAAGIRKGMEKMQRAFEIYPYCAMALNY 273
           R+A QRA ++ P +    VAL    LQ N   E    +  +E  +    + P   + L Y
Sbjct: 201 RRAAQRAKEIAPNDYR--VAL----LQGNLFQEIGDPQSAIEAYKEGQSLAP-SDVTLTY 253

Query: 274 -LANHFFFTGQHFLVEQLTE--TALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 330
            LA  +   G   L E ++E    +    +  T   SY +L   ++ + DY++A  Y+  
Sbjct: 254 NLAISYLKQGN--LAEAISEFQKVVQTAPNSQTAVLSYGHLGTIFYQREDYDRAEYYFRE 311

Query: 331 SVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLG 390
            ++      +    YY LG V LK      A   F+K L+   +  E  + +   ++ +G
Sbjct: 312 VIRLKTGDAK---AYYNLGLVYLKKKVPEEAAKYFQKALDANANEPEVYRYIADAFLSMG 368

Query: 391 QIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLK-KAGEEVPIE 449
           Q   A   L+KA  + P D  +   L EL      G  ++A    R +++   G+     
Sbjct: 369 QTNMAITALKKALLLKPSDVDSLFALAELYYKK--GELVEAESLFRRIIRLTPGDTYSET 426

Query: 450 VLNNIGVIHFEKGEFESAHQSFKDALG 476
              N+G+I  E   +  +  +F+ AL 
Sbjct: 427 AYVNLGIILDEMERYSESIAAFEGALS 453



 Score = 47.8 bits (112), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 61/280 (21%), Positives = 116/280 (41%), Gaps = 16/280 (5%)

Query: 134 KGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHP 193
           +G L    G+ + A  A+K        +V      A     +G  ++++  +++ +Q  P
Sbjct: 221 QGNLFQEIGDPQSAIEAYKEGQSLAPSDVTLTYNLAISYLKQGNLAEAISEFQKVVQTAP 280

Query: 194 SCPGAI-RLG-IGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQ---ANEAA 248
           +   A+   G +G   Y+     +A   F+  ++L   + +A   L ++ L+     EAA
Sbjct: 281 NSQTAVLSYGHLGTIFYQREDYDRAEYYFREVIRLKTGDAKAYYNLGLVYLKKKVPEEAA 340

Query: 249 G-IRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHS 307
              +K ++      E+Y        Y+A+ F   GQ  +     + AL +    P+   S
Sbjct: 341 KYFQKALDANANEPEVY-------RYIADAFLSMGQTNMAITALKKALLLK---PSDVDS 390

Query: 308 YYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEK 367
            + LA  Y+ KG+  +A   +   ++           Y  LG +  ++  +  ++  FE 
Sbjct: 391 LFALAELYYKKGELVEAESLFRRIIRLTPGDTYSETAYVNLGIILDEMERYSESIAAFEG 450

Query: 368 VLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 407
            L + P N      LG  Y+  G+   A E LRK+  +DP
Sbjct: 451 ALSLNPKNQSAYYNLGLSYLHAGKPTMAIESLRKSQALDP 490


>gi|425462037|ref|ZP_18841511.1| Genome sequencing data, contig C313 [Microcystis aeruginosa PCC
           9808]
 gi|389825023|emb|CCI25577.1| Genome sequencing data, contig C313 [Microcystis aeruginosa PCC
           9808]
          Length = 569

 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 79/299 (26%), Positives = 138/299 (46%), Gaps = 31/299 (10%)

Query: 134 KGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVH- 192
           +G  LLA GE E A SA++ VL  D ++V A +  A V  ++ RYS++L+ Y R   V+ 
Sbjct: 44  QGDRLLAAGEKESALSAYRTVLSFDENSVQAHIKIAQVLQSQKRYSEALQAYDRGFIVNH 103

Query: 193 --PSCPGA----IRLGIGLCRYKLGQLGKARQAFQRALQLDPE-NVEALVALAVMDLQA- 244
             P  P      + LG    R +  +  +A  A+Q+A+ + P    +  +  A+  LQ  
Sbjct: 104 KPPMEPSQSNYLVALGDIFAREE--KWSEAIDAYQKAMIIKPTFKAQFQLGKALYSLQRW 161

Query: 245 NEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG--- 301
           +EAA      + +Q A  + P    A       +F+ G+ +  +QL   A          
Sbjct: 162 DEAA------KALQAAVFLDPSQGKA-------YFYLGKAYSEQQLWPEASYAYQQALEL 208

Query: 302 -PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRS 360
            P +  +Y  L  +   +G +++A   Y  ++    K  +    Y  LG+   + G    
Sbjct: 209 IPNQGETYKKLGETLAKQGKWQEAEQIYRQALIYAPKDGDI---YNYLGKALAEQGKLGE 265

Query: 361 ALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGEL 419
           A+  F++  +I P N +  + L +IY+  GQI++     R+A +IDP  ++A   L E+
Sbjct: 266 AMAVFQQARQISPKNAKIYQNLCYIYINNGQIDEGLNWCRQAVEIDPNLSEARFILQEI 324


>gi|157879370|pdb|1NA0|A Chain A, Design Of Stable Alpha-Helical Arrays From An Idealized
           Tpr Motif
 gi|157879371|pdb|1NA0|B Chain B, Design Of Stable Alpha-Helical Arrays From An Idealized
           Tpr Motif
          Length = 125

 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 38/116 (32%), Positives = 67/116 (57%), Gaps = 5/116 (4%)

Query: 303 TKSHSYYNLARSYHSKGDYEKAGLYYMASVK-EINKPHEFIFPYYGLGQVQLKLGDFRSA 361
             + ++YNL  +Y+ +GDY++A  YY  +++ + N    +    Y LG    K GD+  A
Sbjct: 7   NSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAW----YNLGNAYYKQGDYDEA 62

Query: 362 LTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 417
           +  ++K LE+ P+N E    LG+ Y + G  ++A E  +KA ++DP +A+A  +LG
Sbjct: 63  IEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLG 118



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 53/95 (55%), Gaps = 1/95 (1%)

Query: 345 YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAK 404
           +Y LG    K GD+  A+  ++K LE+ P+N E    LG+ Y + G  ++A E  +KA +
Sbjct: 12  WYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALE 71

Query: 405 IDPRDAQAFIDLGELLI-SSDTGAALDAFKTARTL 438
           +DP +A+A+ +LG       D   A++ ++ A  L
Sbjct: 72  LDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALEL 106



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 59/112 (52%), Gaps = 8/112 (7%)

Query: 274 LANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK 333
           L N ++  G +    +  + AL +    P  + ++YNL  +Y+ +GDY++A  YY  +++
Sbjct: 15  LGNAYYKQGDYDEAIEYYQKALELD---PNNAEAWYNLGNAYYKQGDYDEAIEYYQKALE 71

Query: 334 -EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGH 384
            + N    +    Y LG    K GD+  A+  ++K LE+ P+N E  + LG+
Sbjct: 72  LDPNNAEAW----YNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGN 119



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/116 (26%), Positives = 57/116 (49%), Gaps = 5/116 (4%)

Query: 96  LGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVL 155
           LG    KQ + +E    A +YY KA  +D +    W   G     +G+ ++A   ++  L
Sbjct: 15  LGNAYYKQGDYDE----AIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKAL 70

Query: 156 EADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLG 211
           E D +N  A        + +G Y +++E+Y++AL++ P+   A +  +G  + K G
Sbjct: 71  ELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEA-KQNLGNAKQKQG 125



 Score = 43.9 bits (102), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 55/105 (52%), Gaps = 7/105 (6%)

Query: 373 PDN-CETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLI-SSDTGAALD 430
           P N  E    LG+ Y + G  ++A E  +KA ++DP +A+A+ +LG       D   A++
Sbjct: 5   PGNSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIE 64

Query: 431 AFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
            ++ A  L     +    E   N+G  ++++G+++ A + ++ AL
Sbjct: 65  YYQKALEL-----DPNNAEAWYNLGNAYYKQGDYDEAIEYYQKAL 104



 Score = 43.1 bits (100), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 32/129 (24%), Positives = 55/129 (42%), Gaps = 6/129 (4%)

Query: 191 VHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGI 250
           + P         +G   YK G   +A + +Q+AL+LDP N EA   L     +  +    
Sbjct: 3   MDPGNSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGD---Y 59

Query: 251 RKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYN 310
            + +E  Q+A E+ P  A A   L N ++  G +    +  + AL +    P  + +  N
Sbjct: 60  DEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELD---PNNAEAKQN 116

Query: 311 LARSYHSKG 319
           L  +   +G
Sbjct: 117 LGNAKQKQG 125


>gi|391328604|ref|XP_003738777.1| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit
           [Metaseiulus occidentalis]
          Length = 1034

 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 89/391 (22%), Positives = 163/391 (41%), Gaps = 34/391 (8%)

Query: 93  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 152
           Y+ LG +  K+R    H   A   Y +A R+       ++     L+A G++EQA  A+ 
Sbjct: 102 YSNLGNV-LKERG---HLQEALDNYRQAVRLKPDFIDGYINLAAALVAAGDMEQAVQAYI 157

Query: 153 IVLEADRDNVPALLGQACVEFNRG-------RYSDSLEFYKRALQVHPSCPGAIRLGIGL 205
             L+ + D         CV  + G       R  ++   Y +A++  P+   A    +G 
Sbjct: 158 SALQYNPD-------LYCVRSDLGNLLKALSRLDEAKACYLKAIETCPTFAVAWS-NLGC 209

Query: 206 CRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYP 265
                G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P
Sbjct: 210 VFNSQGEVWLAIHHFEKAVALDPHFLDAYINLGNV---LKEARIFDRAVAAYLRALSLSP 266

Query: 266 YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAG 325
             A+    LA  ++  G   L++   ET        P    +Y NLA +   KG  +++ 
Sbjct: 267 NNAVVHGNLACVYYEQG---LIDMAIETYKRAIELQPNFPDAYCNLANALKEKGHVQESE 323

Query: 326 LYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 385
             Y  +++ +    + +     L  ++ + G    A   + K L++YP+       L  +
Sbjct: 324 KCYNTALRLMPSHADSL---NNLANIKREQGQIEDATKLYAKALDVYPEFAAAHSNLASV 380

Query: 386 YVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGE 444
             Q G++ +A    R+A +I P  A A+ ++G  L    D   A+  +  A T+      
Sbjct: 381 LQQQGKLNEALMHYREAIRISPTFADAYSNMGNTLKELGDIQGAMQCYSRAITINPAFA- 439

Query: 445 EVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
               +  +N+  IH + G    A QS++ AL
Sbjct: 440 ----DAHSNLASIHKDSGNIPEAIQSYRTAL 466



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 73/338 (21%), Positives = 133/338 (39%), Gaps = 48/338 (14%)

Query: 83  IAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKG 142
           I       V ++ LG +   Q E      LA  ++ KA  +D H    ++  G +L    
Sbjct: 194 IETCPTFAVAWSNLGCVFNSQGE----VWLAIHHFEKAVALDPHFLDAYINLGNVLKEAR 249

Query: 143 EVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLG 202
             ++A +A+   L    +N       ACV + +G    ++E YKRA+++ P+ P A    
Sbjct: 250 IFDRAVAAYLRALSLSPNNAVVHGNLACVYYEQGLIDMAIETYKRAIELQPNFPDAY-CN 308

Query: 203 IGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFE 262
           +     + G + ++ + +  AL+L P + ++L  LA +     E   I    +   +A +
Sbjct: 309 LANALKEKGHVQESEKCYNTALRLMPSHADSLNNLANIK---REQGQIEDATKLYAKALD 365

Query: 263 IYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYE 322
           +YP  A A                                   HS  NLA     +G   
Sbjct: 366 VYPEFAAA-----------------------------------HS--NLASVLQQQGKLN 388

Query: 323 KAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKAL 382
           +A ++Y  +++       F   Y  +G    +LGD + A+  + + + I P   +    L
Sbjct: 389 EALMHYREAIR---ISPTFADAYSNMGNTLKELGDIQGAMQCYSRAITINPAFADAHSNL 445

Query: 383 GHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 420
             I+   G I +A +  R A ++ P    A+ +L   L
Sbjct: 446 ASIHKDSGNIPEAIQSYRTALRLKPEFPDAYCNLAHCL 483



 Score = 49.3 bits (116), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 92/403 (22%), Positives = 162/403 (40%), Gaps = 42/403 (10%)

Query: 345 YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAK 404
           Y  LG V  + G  + AL N+ + + + PD  +    L    V  G +E+A +    A +
Sbjct: 102 YSNLGNVLKERGHLQEALDNYRQAVRLKPDFIDGYINLAAALVAAGDMEQAVQAYISALQ 161

Query: 405 IDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVL--NNIGVIHFEKG 462
            +P       DLG LL       AL     A+    KA E  P   +  +N+G +   +G
Sbjct: 162 YNPDLYCVRSDLGNLL------KALSRLDEAKACYLKAIETCPTFAVAWSNLGCVFNSQG 215

Query: 463 EFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQ-FKDMQLFHR-FENDGNHVEL 520
           E   A   F+ A+        LD     + +DA  ++    K+ ++F R        + L
Sbjct: 216 EVWLAIHHFEKAVA-------LDP----HFLDAYINLGNVLKEARIFDRAVAAYLRALSL 264

Query: 521 PWNKVTVLFNLARLL-EQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSI 579
             N   V  NLA +  EQ    +A     R I  +  ++ DAY  LA   K + ++Q S 
Sbjct: 265 SPNNAVVHGNLACVYYEQGLIDMAIETYKRAIELQ-PNFPDAYCNLANALKEKGHVQESE 323

Query: 580 ELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNY 639
           +  N AL++   + ++L+ L +++ +      A + +  A D       Y   +  + N 
Sbjct: 324 KCYNTALRLMPSHADSLNNLANIKREQGQIEDATKLYAKALDV------YPEFAAAHSNL 377

Query: 640 FAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFT 699
            + L+ + +        L +A   Y   I    +   A +  G  L E G    +   ++
Sbjct: 378 ASVLQQQGK--------LNEALMHYREAIRISPTFADAYSNMGNTLKELGDIQGAMQCYS 429

Query: 700 QVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLR 742
           +     + ++     D   NLA ++   GN   A++ Y+  LR
Sbjct: 430 R-----AITINPAFADAHSNLASIHKDSGNIPEAIQSYRTALR 467


>gi|146166829|ref|XP_001016119.2| TPR Domain containing protein [Tetrahymena thermophila]
 gi|146145287|gb|EAR95874.2| TPR Domain containing protein [Tetrahymena thermophila SB210]
          Length = 993

 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 102/413 (24%), Positives = 178/413 (43%), Gaps = 42/413 (10%)

Query: 89  LGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQAS 148
           LG YY  + K+E            + +YY  A +I   +       G L L    +E A 
Sbjct: 608 LGKYYFAIQKLEE-----------SIKYYLVAQKIKPSDYEINFNLGILYLKMENLENAE 656

Query: 149 SAFKIVLEAD--RDNVPALLGQACVEFNRGRYSD-----SLEFYKRALQVHPSCPGAIRL 201
             F  VL+A     NV   LGQ  +  N+ + ++     ++EF  +  Q  P   G + L
Sbjct: 657 QYFLKVLQAQVQEQNVFFYLGQVYLNQNKMKQAEYNFLKAVEFDPQEFQ-WPKFIGDLYL 715

Query: 202 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 261
                     +  +AR  +Q+AL L P + E+L+ L  +  + N +  I+  + +     
Sbjct: 716 S-------FKKFEEARFYYQKALNLKPSSEESLLKLIHIYYKCNISQEIQPFLIEF---L 765

Query: 262 EIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDY 321
           E  P    A+  L  HF   G+    +Q    AL +    P    +  +L +SY   G+ 
Sbjct: 766 EKNPENLQAIILLGGHFDDIGKFTEAQQYYLQALQIN---PDSFKAICHLIQSYIRTGEI 822

Query: 322 EKAGLYYMASVK-EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLK 380
           E A  Y+   +K +I+K  E    Y  +G +Q++      ++ +F K LEI P N +T  
Sbjct: 823 ENAKYYFEKLLKLKISKDEE---QYINIGILQVQFQQIEESIQSFLKALEINPQNSQTHY 879

Query: 381 ALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLK 440
            L   Y ++G+ E +++   KA +I+P   +A   LG+    +     ++A K  + +L 
Sbjct: 880 KLADCYEKIGRNEDSKKYYLKAIEINPEFEEALYQLGDYYFKN--CKPVEAQKYYQKVLS 937

Query: 441 KAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALG-DGIWLT-LLDSKTKTY 491
              +++   +   +  I  +  +FE A   F   L  D  +L+ L D + KT+
Sbjct: 938 INPQQLNCHI--KLAYIFQKFNQFEDAKYHFHKVLKIDPNFLSQLQDEEAKTF 988



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 117/531 (22%), Positives = 213/531 (40%), Gaps = 86/531 (16%)

Query: 142 GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS-CPGAIR 200
           G  E A   +  VLE   + +   L    +  N     +S  F K+A  + P+     I 
Sbjct: 475 GRSEDAKKHYFKVLELQPNLLYVNLQLGILYMNEKNEKESESFLKKAYNIDPNNFDTNIN 534

Query: 201 LGIG---LCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKM 257
           LG+    + R   G    A++ FQ+AL+++P + +  + L ++ L  N    +++    +
Sbjct: 535 LGLFYLYIERQNEGNDEIAKKYFQKALEIEPLSEDGFIYLGIIYLNQN---MLKEAEFYL 591

Query: 258 QRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHS 317
            +A++I P      + L  ++F   +   +E+  +  L      P+     +NL   Y  
Sbjct: 592 TKAYQINPNSFKCNSQLGKYYFAIQK---LEESIKYYLVAQKIKPSDYEINFNLGILYLK 648

Query: 318 KGDYEKAGLYYM----ASVKEIN----------------------------KPHEFIFPY 345
             + E A  Y++    A V+E N                             P EF +P 
Sbjct: 649 MENLENAEQYFLKVLQAQVQEQNVFFYLGQVYLNQNKMKQAEYNFLKAVEFDPQEFQWPK 708

Query: 346 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKI 405
           + +G + L    F  A   ++K L + P + E+L  L HIY +    ++ Q  L +  + 
Sbjct: 709 F-IGDLYLSFKKFEEARFYYQKALNLKPSSEESLLKLIHIYYKCNISQEIQPFLIEFLEK 767

Query: 406 DPRDAQAFIDLGELL--ISSDTGA------AL----DAFKTARTLLK---KAGE------ 444
           +P + QA I LG     I   T A      AL    D+FK    L++   + GE      
Sbjct: 768 NPENLQAIILLGGHFDDIGKFTEAQQYYLQALQINPDSFKAICHLIQSYIRTGEIENAKY 827

Query: 445 ------EVPI----EVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVID 494
                 ++ I    E   NIG++  +  + E + QSF  AL     +   +S+T   + D
Sbjct: 828 YFEKLLKLKISKDEEQYINIGILQVQFQQIEESIQSFLKALE----INPQNSQTHYKLAD 883

Query: 495 ASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFK 554
               + + +D + ++        +E+       L+ L     +    V A   Y+ +L  
Sbjct: 884 CYEKIGRNEDSKKYYL-----KAIEINPEFEEALYQLGDYYFKNCKPVEAQKYYQKVLSI 938

Query: 555 YQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELK 605
               ++ +++LA I +  N  + +    ++ LK++   PN LS L D E K
Sbjct: 939 NPQQLNCHIKLAYIFQKFNQFEDAKYHFHKVLKID---PNFLSQLQDEEAK 986



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 74/318 (23%), Positives = 144/318 (45%), Gaps = 49/318 (15%)

Query: 144 VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGI 203
           +E A + F+  ++ D +++ A    A +  + G + ++ +   +AL+++ S    +   +
Sbjct: 100 IEDAKNCFQEAIKIDPNSILAHQFLADIYEDSGNFLEAEKHLLKALEIN-SNQMHLNYRL 158

Query: 204 GLCRYKLGQLGKARQAF------QRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKM 257
           G+   K GQL K+++ F      ++AL++  ++ ++ + L        +   I++  +  
Sbjct: 159 GVLYQKTGQLEKSKKFFLICEGHEKALKMKSQDQQSCIQLGKF---YKKIGKIKEAAQFF 215

Query: 258 QRAFEIYPYCAMALNY-------------------------LANHF---FFTGQHFL-VE 288
           Q+A EI P+    LNY                            HF   +  G+ +L ++
Sbjct: 216 QKADEIQPFQDSELNYNLGLLFCQAKQFQESIKYLLKYKEKYPQHFNTNYVLGEAYLQLK 275

Query: 289 QLTETALAVTNH---GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 345
           QL E+ +         P  +   ++L   Y++    EKA  Y++  V++IN P +    +
Sbjct: 276 QLKESEICFLQALEIEPQSADVCFSLGLIYYNLKKKEKAYKYFL-KVQKIN-PKDLDSAF 333

Query: 346 YGLGQVQLKLGDFR--SALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAA 403
           Y LG   L  GD +   A+  F+KVLEI P   E    LG     +G++E+A+E  +KA 
Sbjct: 334 Y-LGC--LYQGDNKQEDAICCFQKVLEIIPQCFEANFYLGFSLDLVGKVEEAKEQFQKAF 390

Query: 404 KIDPRDAQAFIDLGELLI 421
            I P+  + +  LG   +
Sbjct: 391 VIKPQSVKEYAQLGNFYL 408



 Score = 48.5 bits (114), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 81/363 (22%), Positives = 141/363 (38%), Gaps = 58/363 (15%)

Query: 89  LGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQAS 148
           LG +Y  +GKI+            A Q++ KA  I   + S       LL  + +  Q  
Sbjct: 198 LGKFYKKIGKIKE-----------AAQFFQKADEIQPFQDSELNYNLGLLFCQAK--QFQ 244

Query: 149 SAFKIVLEADRD-----NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGI 203
            + K +L+         N   +LG+A ++  + + S+    + +AL++ P     +   +
Sbjct: 245 ESIKYLLKYKEKYPQHFNTNYVLGEAYLQLKQLKESEIC--FLQALEIEPQ-SADVCFSL 301

Query: 204 GLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEI 263
           GL  Y L +  KA + F +  +++P+++++   L  +    N+       +   Q+  EI
Sbjct: 302 GLIYYNLKKKEKAYKYFLKVQKINPKDLDSAFYLGCLYQGDNKQ---EDAICCFQKVLEI 358

Query: 264 YPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEK 323
            P C  A  YL       G+   VE+  E         P     Y  L   Y   G   +
Sbjct: 359 IPQCFEANFYLGFSLDLVGK---VEEAKEQFQKAFVIKPQSVKEYAQLGNFYLQFGRKYE 415

Query: 324 AGLYYMASVKEINKPHEF-----------IFP---------------YYG---LGQVQLK 354
           A   ++      N P EF           +F                +Y    LG V   
Sbjct: 416 AQKCFIKGFN--NNPIEFESFISQNVDSQLFTNLKVQKDLDKINEKNFYSSLYLGSVYEL 473

Query: 355 LGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFI 414
           +G    A  ++ KVLE+ P+       LG +Y+     ++++  L+KA  IDP +    I
Sbjct: 474 IGRSEDAKKHYFKVLELQPNLLYVNLQLGILYMNEKNEKESESFLKKAYNIDPNNFDTNI 533

Query: 415 DLG 417
           +LG
Sbjct: 534 NLG 536


>gi|196232945|ref|ZP_03131794.1| TPR repeat-containing protein [Chthoniobacter flavus Ellin428]
 gi|196222923|gb|EDY17444.1| TPR repeat-containing protein [Chthoniobacter flavus Ellin428]
          Length = 808

 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 96/401 (23%), Positives = 165/401 (41%), Gaps = 81/401 (20%)

Query: 86  LNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVE 145
           L+ LGV    +G+ E  +        +A    N A+  D+         G  L ++  +E
Sbjct: 49  LHLLGVIALQMGQHEAAENLLRRSIAMAPD--NPAAHYDL---------GNALRSRKRLE 97

Query: 146 QASSAFKIVLEADRDNVPAL--LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGI 203
            A +A++  +E   D V AL  LG AC E   GR  +++  ++ AL++ P         +
Sbjct: 98  DAIAAYRRAIELRPDYVEALHNLGVACKE--SGRLDEAIAAFQGALRLQPQ--------L 147

Query: 204 GLCRYKLG-------QLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEK 256
            +  Y LG       + G+A  A+++A+ L P+ V+A   L V      EA    + +  
Sbjct: 148 MVAHYNLGNALRERKRYGEAIAAYRQAIALGPDYVDAHNNLGVA---CKEAGRFEEAVAA 204

Query: 257 MQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYH 316
            QRA E+ P  A A N                                     NL  ++ 
Sbjct: 205 YQRAIELQPDHAAAHN-------------------------------------NLGAAWR 227

Query: 317 SKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNC 376
            +G  ++A    +A  + I    +F   Y  LG    + G    A+  F + +E+ PD  
Sbjct: 228 ERGALDEA---IVAQRRAIELRPDFAEAYNNLGVACKERGRTDEAVAAFRRSIELQPDFA 284

Query: 377 ETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTAR 436
           ET   LG+   + G+ ++A    R+A  + P  A A  +L   L S      +     A 
Sbjct: 285 ETHNNLGNTLQECGRADEAIAAYRRALALQPEYAAAANNLASTLRS------VGLLDEAT 338

Query: 437 TLLKKAGEEVPI--EVLNNIGVIHFEKGEFESAHQSFKDAL 475
             +++A E  P   ++ NN+G I  ++G+ E A  ++++AL
Sbjct: 339 AAIRRALELQPALSDIRNNLGNILKDQGDVEGAIGAYREAL 379



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 59/113 (52%), Gaps = 8/113 (7%)

Query: 365 FEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSD 424
           + ++L + PD+ + L  LG I +Q+GQ E A+ LLR++  + P +  A  DLG  L S  
Sbjct: 35  YRQILAVQPDHAQALHLLGVIALQMGQHEAAENLLRRSIAMAPDNPAAHYDLGNALRSRK 94

Query: 425 TGAALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDAL 475
                   + A    ++A E  P  +E L+N+GV   E G  + A  +F+ AL
Sbjct: 95  R------LEDAIAAYRRAIELRPDYVEALHNLGVACKESGRLDEAIAAFQGAL 141



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 72/305 (23%), Positives = 132/305 (43%), Gaps = 24/305 (7%)

Query: 176 GRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV 235
           GR +++   Y++ L V P    A+ L +G+   ++GQ   A    +R++ + P+N  A  
Sbjct: 26  GRLAEAEGLYRQILAVQPDHAQALHL-LGVIALQMGQHEAAENLLRRSIAMAPDNPAAHY 84

Query: 236 ALAVMDLQANEAAGIRKGMEKM----QRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLT 291
            L         A   RK +E      +RA E+ P    AL+ L      +G+        
Sbjct: 85  DL-------GNALRSRKRLEDAIAAYRRAIELRPDYVEALHNLGVACKESGRLDEAIAAF 137

Query: 292 ETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQV 351
           + AL +    P    ++YNL  +   +  Y +A   Y    + I    +++  +  LG  
Sbjct: 138 QGALRLQ---PQLMVAHYNLGNALRERKRYGEAIAAYR---QAIALGPDYVDAHNNLGVA 191

Query: 352 QLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQ 411
             + G F  A+  +++ +E+ PD+      LG  + + G +++A    R+A ++ P  A+
Sbjct: 192 CKEAGRFEEAVAAYQRAIELQPDHAAAHNNLGAAWRERGALDEAIVAQRRAIELRPDFAE 251

Query: 412 AFIDLGELLIS-SDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQS 470
           A+ +LG        T  A+ AF+ +  L          E  NN+G    E G  + A  +
Sbjct: 252 AYNNLGVACKERGRTDEAVAAFRRSIELQPDFA-----ETHNNLGNTLQECGRADEAIAA 306

Query: 471 FKDAL 475
           ++ AL
Sbjct: 307 YRRAL 311


>gi|118364085|ref|XP_001015265.1| TPR Domain containing protein [Tetrahymena thermophila]
 gi|89297032|gb|EAR95020.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
          Length = 1052

 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 155/702 (22%), Positives = 289/702 (41%), Gaps = 103/702 (14%)

Query: 70  EIDEYYADVRYERIAIL----NALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDM 125
           EID  Y++V YE +A +    N+  V   +   IE        ++ LA  Y N    ++M
Sbjct: 105 EIDPNYSEV-YESLATIKDAENSKDVIKYFKQIIEVNPNNYYPYYSLAYLYLN----LNM 159

Query: 126 HEPSTWVGKGQLLLAKGEV---EQASSAF----KIVLEADRDNVPALL--GQAC-VEFNR 175
            + S       L +    V   E+ S  +    K+ ++ D +   A L  GQ C V  N 
Sbjct: 160 IDESLQCLNKVLDINPNNVDAYERLSQVYLKVLKLAIQIDPNYKKAYLSMGQICQVYENV 219

Query: 176 GRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV 235
             +  ++E +K+ L++ P+   ++     +C +   +  +A +  Q+ALQ++P+N E L 
Sbjct: 220 KSFDQAIECFKKILEIKPNSTKSLMSIAKIC-FTQQKFDEAIENIQKALQIEPKNAETLE 278

Query: 236 ALAVMDLQANEAAGIRKGMEKM---QRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTE 292
            L  +         ++K  + +    ++ E+ P      NY    F     +F  ++L E
Sbjct: 279 RLGYI------YQHLKKYDDALFWYNKSLEVKP------NYYFPLFNKGIIYFAQKKLDE 326

Query: 293 TAL---AVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLG 349
             L    V    P   +++YNL   Y  K    +A      +V ++N  H+       + 
Sbjct: 327 AILELQKVIKIKPDYIYAHYNLGLIYEQKQMMNEAINCQKKAV-DLNPKHKDSLIRLAVI 385

Query: 350 QVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRD 409
             QLK+  F  A+  ++KV+++ P+N +    LG ++ Q  ++++A     K  KI+P D
Sbjct: 386 HTQLKM--FDQAIEYYQKVIQLNPNNTDVQNNLGILFEQSNKLDEAINCYMKNIKINPND 443

Query: 410 AQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESA 467
           ++ + +LG   I  +   ++D    A    KKA E  P  ++   ++G  +  K   + A
Sbjct: 444 SKTYFNLG---IVYEKKKSID---EAMVCFKKALEINPSFLQAQISLGNAYSSKKMVDEA 497

Query: 468 HQSFKDALGDGIWLTLLDSKTKTYVIDASASM-LQFKDMQLFHR-FENDGNHVELPWNKV 525
              FK ++        LD  +     +A  S+ L + D Q+  + FE     +++  N  
Sbjct: 498 ILCFKKSIQ-------LDPNS----FNAYNSLGLIYYDTQMMDQAFECFQKALDINPNYF 546

Query: 526 TVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLR------------------LAA 567
              FNL  + E  +    A   Y+  +    +  +A L+                  L  
Sbjct: 547 FAHFNLGLVYENRNQQEEALKHYQQAIQSNPNQANALLKASDLYIQNKNFDKALQCYLYY 606

Query: 568 IAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDAT---- 623
           I K ++   LS++   +A+K++  Y  A   LG ++ +N  + ++   F+   +      
Sbjct: 607 IQKIKDKAILSLK---QAVKLDPNYYQAYEQLGLIQQENKMFEESILYFKKVIEINPMFL 663

Query: 624 DGKDS----YATLSLGNWNYFAALRNEKRAPKLEATH------------LEKAKELYTRV 667
           +  DS    Y  + + N       +     PKLE TH            L++A   Y + 
Sbjct: 664 NAYDSLACVYQEMKMSNEALIYYQKALDINPKLENTHFKLGILYQEKKMLDEAILCYQKA 723

Query: 668 IVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSV 709
           I  +  N  A N  G++  +K   D + D +T+  E     V
Sbjct: 724 IEINPKNANAYNNLGIIFEQKNMIDQAFDCYTKALEIDQSYV 765



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 75/310 (24%), Positives = 130/310 (41%), Gaps = 62/310 (20%)

Query: 117  YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 176
            Y KA  ID          G L     ++++A   FK+ +E D +   +   Q  V   +G
Sbjct: 754  YTKALEIDQSYVKAHNNIGLLYYDLKQMDKAHQCFKLSIELDPNYEDSHYNQGLVYEFQG 813

Query: 177  RYSDSLEFYKRALQVHPSCPGAI-RLGIGLCRYK-LGQLGKARQAFQRALQLDPENVEAL 234
              ++++E YKRA+Q++P    A  RL    C Y  L  + +A   + + ++L+PEN++A+
Sbjct: 814  HITEAMESYKRAIQINPKYTKAYSRLA---CIYSDLEMMIEAISCYLQLIELEPENIDAM 870

Query: 235  VALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETA 294
              + ++  Q N+                  P  A+                   QL + A
Sbjct: 871  NYVGIIYSQRNQ------------------PNTAI-------------------QLFQRA 893

Query: 295  LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYM-------ASVKEINKPHEFIFPYYG 347
            L +    P   +S YNL  +Y  K   ++A  YY         +VK INK          
Sbjct: 894  LLI---NPEHINSLYNLGNTYEDKEQLDEAISYYQRIIQIDPQNVKAINK---------- 940

Query: 348  LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 407
            +G + +K    + ALT ++K L I  +  +T   +   Y    ++ K+ +  +KA +IDP
Sbjct: 941  IGNIYIKKQMDQEALTQYKKALSIDKNFVQTYYNIAAYYEIQQKLNKSIQFYKKAVEIDP 1000

Query: 408  RDAQAFIDLG 417
                 + +LG
Sbjct: 1001 EYIGIYFNLG 1010



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 83/370 (22%), Positives = 154/370 (41%), Gaps = 25/370 (6%)

Query: 116  YYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNR 175
            YY KA  I+    +T    G L   K  +++A   ++  +E +  N  A      +   +
Sbjct: 685  YYQKALDINPKLENTHFKLGILYQEKKMLDEAILCYQKAIEINPKNANAYNNLGIIFEQK 744

Query: 176  GRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV 235
                 + + Y +AL++  S   A    IGL  Y L Q+ KA Q F+ +++LDP   ++  
Sbjct: 745  NMIDQAFDCYTKALEIDQSYVKA-HNNIGLLYYDLKQMDKAHQCFKLSIELDPNYEDSHY 803

Query: 236  ALA-VMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETA 294
                V + Q +    I + ME  +RA +I P    A + LA    ++    ++E ++   
Sbjct: 804  NQGLVYEFQGH----ITEAMESYKRAIQINPKYTKAYSRLA--CIYSDLEMMIEAIS-CY 856

Query: 295  LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLK 354
            L +    P    +  N     +S+ +     +        IN  H  I   Y LG     
Sbjct: 857  LQLIELEPENIDAM-NYVGIIYSQRNQPNTAIQLFQRALLINPEH--INSLYNLGNTYED 913

Query: 355  LGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFI 414
                  A++ ++++++I P N + +  +G+IY++    ++A    +KA  ID    Q + 
Sbjct: 914  KEQLDEAISYYQRIIQIDPQNVKAINKIGNIYIKKQMDQEALTQYKKALSIDKNFVQTYY 973

Query: 415  DLGELL-ISSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSF 471
            ++     I      ++  +       KKA E  P  I +  N+G ++ E+   + A   +
Sbjct: 974  NIAAYYEIQQKLNKSIQFY-------KKAVEIDPEYIGIYFNLGAVYDERNVLDKALSYY 1026

Query: 472  KDAL---GDG 478
            K      GDG
Sbjct: 1027 KKIFKLDGDG 1036



 Score = 48.5 bits (114), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 87/435 (20%), Positives = 156/435 (35%), Gaps = 75/435 (17%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
           A Q Y KA  I+ +        GQ+   K    QA  ++ + L+ D++         C+ 
Sbjct: 28  AVQCYLKAIEINPNMFEAHKRLGQVYELKKIPNQALISYNLALKIDQNEKQIHYRIGCIY 87

Query: 173 FNRGRYSDSLEFYKRALQVHP----------------SCPGAIR---------------- 200
            ++     +L  +KRA+++ P                +    I+                
Sbjct: 88  LSQSIVGQALICFKRAIEIDPNYSEVYESLATIKDAENSKDVIKYFKQIIEVNPNNYYPY 147

Query: 201 LGIGLCRYKLGQLGKARQAFQRALQLDPENVEAL-----VALAVMDLQANEAAGIRK--- 252
             +      L  + ++ Q   + L ++P NV+A      V L V+ L        +K   
Sbjct: 148 YSLAYLYLNLNMIDESLQCLNKVLDINPNNVDAYERLSQVYLKVLKLAIQIDPNYKKAYL 207

Query: 253 -----------------GMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETAL 295
                             +E  ++  EI P    +L  +A    FT Q F  ++  E   
Sbjct: 208 SMGQICQVYENVKSFDQAIECFKKILEIKPNSTKSLMSIA-KICFTQQKF--DEAIENIQ 264

Query: 296 AVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKL 355
                 P  + +   L   Y     Y+ A  +Y  S++   KP+ + FP +  G +    
Sbjct: 265 KALQIEPKNAETLERLGYIYQHLKKYDDALFWYNKSLEV--KPN-YYFPLFNKGIIYFAQ 321

Query: 356 GDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFID 415
                A+   +KV++I PD       LG IY Q   + +A    +KA  ++P+   + I 
Sbjct: 322 KKLDEAILELQKVIKIKPDYIYAHYNLGLIYEQKQMMNEAINCQKKAVDLNPKHKDSLIR 381

Query: 416 LGELLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKD 473
           L  +         L  F  A    +K  +  P   +V NN+G++  +  + + A   +  
Sbjct: 382 LAVI------HTQLKMFDQAIEYYQKVIQLNPNNTDVQNNLGILFEQSNKLDEAINCY-- 433

Query: 474 ALGDGIWLTLLDSKT 488
                I +   DSKT
Sbjct: 434 --MKNIKINPNDSKT 446


>gi|339501296|ref|YP_004699331.1| hypothetical protein Spica_2727 [Spirochaeta caldaria DSM 7334]
 gi|338835645|gb|AEJ20823.1| Tetratricopeptide TPR_1 repeat-containing protein [Spirochaeta
           caldaria DSM 7334]
          Length = 1004

 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 80/334 (23%), Positives = 148/334 (44%), Gaps = 42/334 (12%)

Query: 93  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 152
           Y  LG +  + +E E+ F +    + K   +D + P      G  L +KG+ ++A   ++
Sbjct: 145 YNNLGTMYDRLQESEKAFAI----FQKGLSLDRNNPVLHFNYGLALESKGKFDEAVREYE 200

Query: 153 IVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQ 212
             L +    V AL     +   +GR+SD+LE + R L + P    A R  IG+     G+
Sbjct: 201 AALRSRPGWVEALNNLGILRLKQGRHSDALEIFNRILSIDPFNAEA-RNNIGVVFADQGK 259

Query: 213 LGKARQAFQRALQLDPENVEALVAL------------AVMDLQ-----ANEAAGIR---- 251
              A   +++A+++DP+ V+A+V L            A+++L+        +  +R    
Sbjct: 260 FNDAITNYRQAIEVDPKYVKAVVNLEHALESIGHQGDALIELEKLVKLVPNSTEVRINLG 319

Query: 252 ----------KGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG 301
                     + +E+  RA E  P    AL      +   G+    +   E  LA+    
Sbjct: 320 ALYLKLQRYPEALEQATRALEWDPDNLQALRIQGAAYRAIGKDAEAQACFERILAIE--- 376

Query: 302 PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSA 361
           P     Y +LA  +  + +Y +A    +A ++   KP +       LG++ ++ G+   A
Sbjct: 377 PGNYSFYLDLADLHFQRKEYREAEERILAFLR--RKPQDRNAKMM-LGRLYVETGNKAHA 433

Query: 362 LTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKA 395
           +T FE++++  P + E L AL  I+ + G +EKA
Sbjct: 434 ITIFEELIKDNPQDVEALAALAEIHKKTGDMEKA 467



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 83/338 (24%), Positives = 144/338 (42%), Gaps = 22/338 (6%)

Query: 142 GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 201
           G+  +A    K  L  ++++  ALL         G+Y ++L+ +   L  +P    A+  
Sbjct: 20  GDHAEAERLLKYYLSKNKNDREALLLLGSTYAKSGKYDEALDVFHSLLGSNPDDLEALN- 78

Query: 202 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 261
            I +   K   L KA  A +RA++LDP   E    L  +  Q +          K+    
Sbjct: 79  NIAVIYRKKEDLNKALDALERAIELDPTRPELYYNLGNVYKQLSNYKAASMAYAKV---I 135

Query: 262 EIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHS----YYNLARSYHS 317
           E+ P    A N L       G  +   Q +E A A+   G +   +    ++N   +  S
Sbjct: 136 ELDPRYVPAYNNL-------GTMYDRLQESEKAFAIFQKGLSLDRNNPVLHFNYGLALES 188

Query: 318 KGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCE 377
           KG +++A   Y A+++  ++P  ++     LG ++LK G    AL  F ++L I P N E
Sbjct: 189 KGKFDEAVREYEAALR--SRPG-WVEALNNLGILRLKQGRHSDALEIFNRILSIDPFNAE 245

Query: 378 TLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTART 437
               +G ++   G+   A    R+A ++DP+  +A ++L   L S   G   DA      
Sbjct: 246 ARNNIGVVFADQGKFNDAITNYRQAIEVDPKYVKAVVNLEHALES--IGHQGDALIELEK 303

Query: 438 LLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
           L+K        EV  N+G ++ +   +  A +    AL
Sbjct: 304 LVKLVPNST--EVRINLGALYLKLQRYPEALEQATRAL 339



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 90/381 (23%), Positives = 153/381 (40%), Gaps = 40/381 (10%)

Query: 44  LIIAREYFKQGKVEQ----FRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKI 99
           L++   Y K GK ++    F  +L  GS+P+            +  LN + V Y      
Sbjct: 44  LLLGSTYAKSGKYDEALDVFHSLL--GSNPD-----------DLEALNNIAVIY------ 84

Query: 100 ETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADR 159
                 K+E    A     +A  +D   P  +   G +       + AS A+  V+E D 
Sbjct: 85  -----RKKEDLNKALDALERAIELDPTRPELYYNLGNVYKQLSNYKAASMAYAKVIELDP 139

Query: 160 DNVPALLGQACVEFNRGRYSD-SLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQ 218
             VPA      + ++R + S+ +   +++ L +  + P  +    GL     G+  +A +
Sbjct: 140 RYVPAYNNLGTM-YDRLQESEKAFAIFQKGLSLDRNNP-VLHFNYGLALESKGKFDEAVR 197

Query: 219 AFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHF 278
            ++ AL+  P  VEAL  L ++ L+    +     +E   R   I P+ A A N +    
Sbjct: 198 EYEAALRSRPGWVEALNNLGILRLKQGRHSD---ALEIFNRILSIDPFNAEARNNIG--V 252

Query: 279 FFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKP 338
            F  Q    + +T    A+    P    +  NL  +  S G    A +     VK +   
Sbjct: 253 VFADQGKFNDAITNYRQAI-EVDPKYVKAVVNLEHALESIGHQGDALIELEKLVKLVPNS 311

Query: 339 HEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQEL 398
            E       LG + LKL  +  AL    + LE  PDN + L+  G  Y  +G+  +AQ  
Sbjct: 312 TEVRI---NLGALYLKLQRYPEALEQATRALEWDPDNLQALRIQGAAYRAIGKDAEAQAC 368

Query: 399 LRKAAKIDPRDAQAFIDLGEL 419
             +   I+P +   ++DL +L
Sbjct: 369 FERILAIEPGNYSFYLDLADL 389



 Score = 47.8 bits (112), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 74/329 (22%), Positives = 132/329 (40%), Gaps = 22/329 (6%)

Query: 143 EVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLG 202
           E E+A + F+  L  DR+N            ++G++ +++  Y+ AL+  P    A+   
Sbjct: 157 ESEKAFAIFQKGLSLDRNNPVLHFNYGLALESKGKFDEAVREYEAALRSRPGWVEALN-N 215

Query: 203 IGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFE 262
           +G+ R K G+   A + F R L +DP N EA   + V+     +       +   ++A E
Sbjct: 216 LGILRLKQGRHSDALEIFNRILSIDPFNAEARNNIGVV---FADQGKFNDAITNYRQAIE 272

Query: 263 IYPYCAMALNYLANHFFFTGQH----FLVEQLTETALAVTNHGPTKSHSYYNLARSYHSK 318
           + P    A+  L +     G        +E+L +         P  +    NL   Y   
Sbjct: 273 VDPKYVKAVVNLEHALESIGHQGDALIELEKLVKLV-------PNSTEVRINLGALYLKL 325

Query: 319 GDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCET 378
             Y +A      + + +    + +      G     +G    A   FE++L I P N   
Sbjct: 326 QRYPEA---LEQATRALEWDPDNLQALRIQGAAYRAIGKDAEAQACFERILAIEPGNYSF 382

Query: 379 LKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTL 438
              L  ++ Q  +  +A+E +    +  P+D  A + LG L +  +TG    A      L
Sbjct: 383 YLDLADLHFQRKEYREAEERILAFLRRKPQDRNAKMMLGRLYV--ETGNKAHAITIFEEL 440

Query: 439 LKKAGEEVPIEVLNNIGVIHFEKGEFESA 467
           +K   ++V  E L  +  IH + G+ E A
Sbjct: 441 IKDNPQDV--EALAALAEIHKKTGDMEKA 467


>gi|440753492|ref|ZP_20932695.1| trypsin family protein [Microcystis aeruginosa TAIHU98]
 gi|440177985|gb|ELP57258.1| trypsin family protein [Microcystis aeruginosa TAIHU98]
          Length = 569

 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 79/299 (26%), Positives = 137/299 (45%), Gaps = 31/299 (10%)

Query: 134 KGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVH- 192
           +G  LLA GE E A SA++ VL  D ++V A +  A V  ++ RYS++L+ Y R   V+ 
Sbjct: 44  QGDRLLAAGEKESALSAYRTVLSFDENSVQAHIKIAQVLQSQKRYSEALQAYDRGFIVNH 103

Query: 193 --PSCPGA----IRLGIGLCRYKLGQLGKARQAFQRALQLDPE-NVEALVALAVMDLQA- 244
             P  P      + LG    R +  +  +A  A+Q+A+ + P    +  +  A+  LQ  
Sbjct: 104 KPPMEPSQSNYLVALGDIFAREE--KWSEAIDAYQKAMIIKPTFKAQFQLGKALYSLQRW 161

Query: 245 NEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG--- 301
           +EAA      + +Q A  + P    A       +F+ G+ +  +QL   A          
Sbjct: 162 DEAA------KALQAAVFLDPSQGKA-------YFYLGKAYSEQQLWPEASYAYQQALEL 208

Query: 302 -PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRS 360
            P +  +Y  L  +   +G +++A   Y  ++    K  +    Y  LG+   + G    
Sbjct: 209 IPNQGETYKKLGETLAKQGKWQEAEQIYRQALIYAPKDGDI---YNYLGKALAEQGKLGE 265

Query: 361 ALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGEL 419
           A+  F++  +I P N    + L +IY+  GQI++     R+A +IDP  ++A   L E+
Sbjct: 266 AMAVFQQARQISPKNANIYENLCYIYINSGQIDEGLNWCRQAVEIDPNLSEARFILQEI 324


>gi|356505394|ref|XP_003521476.1| PREDICTED: probable UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase SPINDLY-like [Glycine
           max]
          Length = 919

 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 95/394 (24%), Positives = 167/394 (42%), Gaps = 66/394 (16%)

Query: 132 VGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQA-CVEF-NRGRYSDSLEFYKRAL 189
           V    +L ++ +   A S ++ VLE+D  NV AL+G+  C++  N+GR   + E +  A+
Sbjct: 44  VSYANVLRSRNKFVDALSIYERVLESDGANVEALIGKGICLQMQNKGRL--AYESFSEAI 101

Query: 190 QVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVM--DLQAN-- 245
           +V P    A+    G+     G+L +A +++Q+ALQ+DP    A   LA++  D+  N  
Sbjct: 102 KVDPQNACALT-HCGILHKDEGRLVEAAESYQKALQVDPSYKAAAECLAIVLTDIGTNIK 160

Query: 246 EAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALA----VTNHG 301
            A   + G++K   A ++ P+ A A       ++  G  +      +TAL+      +  
Sbjct: 161 LAGNTQDGIQKYFEALKVDPHYAPA-------YYNLGVVYSEMMQYDTALSFYEKAASER 213

Query: 302 PTKSHSYYNLARSYHSKGDYEKAGLYYMASVK-----EINKPHEFIF------------- 343
           P  + +Y N+   + ++GD E A   Y   +      EI K +  I              
Sbjct: 214 PIYAEAYCNMGVIFKNRGDLESAITCYERCLTVSPNFEIAKNNMAIALTDLGTKVKLEGD 273

Query: 344 --------------------PYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALG 383
                                 Y LG    ++  F  A+  +E      P   E    LG
Sbjct: 274 INQGVTLYKKALYYNWHYADAMYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLG 333

Query: 384 HIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAG 443
            IY     ++KA E  + A  I P  +Q+  +LG   +       +DA   A ++++KA 
Sbjct: 334 VIYKDRENLDKAVECYQLALSIKPNFSQSLNNLG---VVYTVQGKVDA---AASMIEKAI 387

Query: 444 EEVPI--EVLNNIGVIHFEKGEFESAHQSFKDAL 475
              P   E  NN+GV++ + G+   A  +++  L
Sbjct: 388 IANPTYAEAYNNLGVLYRDAGDIARAINAYEQCL 421



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 62/262 (23%), Positives = 106/262 (40%), Gaps = 33/262 (12%)

Query: 356 GDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK----AQELLRK---AAKIDPR 408
           G    A  +++K L++ P      + L  +   +G   K     Q+ ++K   A K+DP 
Sbjct: 122 GRLVEAAESYQKALQVDPSYKAAAECLAIVLTDIGTNIKLAGNTQDGIQKYFEALKVDPH 181

Query: 409 DAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPI--EVLNNIGVIHFEKGEFES 466
            A A+ +LG +       + +  + TA +  +KA  E PI  E   N+GVI   +G+ ES
Sbjct: 182 YAPAYYNLGVVY------SEMMQYDTALSFYEKAASERPIYAEAYCNMGVIFKNRGDLES 235

Query: 467 AHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNH-VEL----- 520
           A   ++  L          + +  + I  +   +   D+    + E D N  V L     
Sbjct: 236 AITCYERCL----------TVSPNFEIAKNNMAIALTDLGTKVKLEGDINQGVTLYKKAL 285

Query: 521 --PWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLS 578
              W+    ++NL     ++     A V Y L         +A   L  I K R NL  +
Sbjct: 286 YYNWHYADAMYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRENLDKA 345

Query: 579 IELVNEALKVNGKYPNALSMLG 600
           +E    AL +   +  +L+ LG
Sbjct: 346 VECYQLALSIKPNFSQSLNNLG 367


>gi|158523125|ref|YP_001530995.1| hypothetical protein Dole_3115 [Desulfococcus oleovorans Hxd3]
 gi|158511951|gb|ABW68918.1| TPR repeat-containing protein [Desulfococcus oleovorans Hxd3]
          Length = 284

 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 68/272 (25%), Positives = 116/272 (42%), Gaps = 17/272 (6%)

Query: 142 GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 201
           G+ ++A  AF  VL+   D  PA   +A   ++ G Y  ++  Y RAL ++P  P +   
Sbjct: 7   GQYDKAVEAFTRVLDLSPDFAPAYNNRAAARWDLGDYEGAVADYNRALAINPDFPESYN- 65

Query: 202 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 261
           G G     +GQ+ KA     RA++L P+  +A     V   +  +  G    +    RA 
Sbjct: 66  GRGKAFCDMGQMDKALADLDRAVELAPDFADAYNNRGVALRKTGDFIG---ALADHSRAI 122

Query: 262 EIYPYCAMALNYLANHFFFTGQHFLVEQLTETAL----AVTNHGPTKSHSYYNLARSYHS 317
           ++ P      +  A  +   G  +L +   + A+    A     P  + +Y NLA ++  
Sbjct: 123 QMRP------DRAAEFYNARGVTWLEKGDPDKAIADFTAALAENPGFAWAYNNLASAWME 176

Query: 318 KGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCE 377
           KG  ++A   Y  ++    +  E +    G G V+ + GD+  AL + +K +E YP    
Sbjct: 177 KGQPDRAMAAYDKALSIFPRMAEAL---SGRGSVRAQAGDYTGALADLDKAIEFYPSYHT 233

Query: 378 TLKALGHIYVQLGQIEKAQELLRKAAKIDPRD 409
                  +Y   G  EKA     KA  + P +
Sbjct: 234 AYYNRARVYQLTGNREKALANAVKAVGLFPNN 265



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 43/159 (27%), Positives = 70/159 (44%), Gaps = 10/159 (6%)

Query: 319 GDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCET 378
           G Y+KA     A  + ++   +F   Y      +  LGD+  A+ ++ + L I PD  E+
Sbjct: 7   GQYDKA---VEAFTRVLDLSPDFAPAYNNRAAARWDLGDYEGAVADYNRALAINPDFPES 63

Query: 379 LKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSD--TGAALDAFKTAR 436
               G  +  +GQ++KA   L +A ++ P  A A+ + G  L  +    GA  D  +  +
Sbjct: 64  YNGRGKAFCDMGQMDKALADLDRAVELAPDFADAYNNRGVALRKTGDFIGALADHSRAIQ 123

Query: 437 TLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
               +A      E  N  GV   EKG+ + A   F  AL
Sbjct: 124 MRPDRAA-----EFYNARGVTWLEKGDPDKAIADFTAAL 157



 Score = 44.3 bits (103), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 50/208 (24%), Positives = 86/208 (41%), Gaps = 6/208 (2%)

Query: 117 YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 176
           YN+A  I+   P ++ G+G+     G++++A +     +E   D   A   +       G
Sbjct: 50  YNRALAINPDFPESYNGRGKAFCDMGQMDKALADLDRAVELAPDFADAYNNRGVALRKTG 109

Query: 177 RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVA 236
            +  +L  + RA+Q+ P          G+   + G   KA   F  AL  +P    A   
Sbjct: 110 DFIGALADHSRAIQMRPDRAAEFYNARGVTWLEKGDPDKAIADFTAALAENPGFAWAYNN 169

Query: 237 LAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALA 296
           LA   ++  +     + M    +A  I+P  A AL+   +     G +     L +   A
Sbjct: 170 LASAWMEKGQP---DRAMAAYDKALSIFPRMAEALSGRGSVRAQAGDY--TGALADLDKA 224

Query: 297 VTNHGPTKSHSYYNLARSYHSKGDYEKA 324
           +  + P+   +YYN AR Y   G+ EKA
Sbjct: 225 IEFY-PSYHTAYYNRARVYQLTGNREKA 251


>gi|427719490|ref|YP_007067484.1| hypothetical protein Cal7507_4274 [Calothrix sp. PCC 7507]
 gi|427351926|gb|AFY34650.1| Tetratricopeptide TPR_1 repeat-containing protein [Calothrix sp.
           PCC 7507]
          Length = 340

 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 73/313 (23%), Positives = 136/313 (43%), Gaps = 31/313 (9%)

Query: 142 GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 201
           G+++ A   ++ V++   D  PA   +    F  G  + ++  Y +A+Q+ P  P A   
Sbjct: 33  GDIKAAIIDYEKVIQLQPDLTPAYNNRGLARFQLGDINGAISDYNQAIQLQPDSPLAYN- 91

Query: 202 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 261
             GL R++LG + +A   + +A++L+P   EA        ++  +   I  G+    RA 
Sbjct: 92  NRGLARFELGDIKEAISDYNQAIKLEPNYAEAYNNRGNAYVKLGD---INAGIFDYDRAI 148

Query: 262 EIYPYCAMALNYLANHF-FFTGQHFLVEQLTETALAVTNHG------PTKSHSYYNLARS 314
           +  P          NH  F+  + +   +L +    + ++       P  + +Y+N   +
Sbjct: 149 QFQP----------NHAEFYNNRGYARFELGDINAGIFDYDRAIELQPDLASAYHNRGYA 198

Query: 315 YHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPD 374
             S G+ ++A   Y    + I         YYG G VQL LG+++ A  +F++ +++ PD
Sbjct: 199 RFSLGEKQEA---YADCDRAIQLQPSNPKAYYGRGTVQLSLGEYQEAFADFDRAIQLQPD 255

Query: 375 NCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG----ELLISSDTGAALD 430
                   G    QL   E A     +A  +     +A+ + G    EL    D  AA++
Sbjct: 256 YYIAYFNRGFSRYQLDDNEGAISDYSQAISLHSNYPKAYFNRGLAKNEL---GDKQAAIE 312

Query: 431 AFKTARTLLKKAG 443
            F+TA  L ++ G
Sbjct: 313 DFQTAANLYQQQG 325



 Score = 42.0 bits (97), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 30/124 (24%), Positives = 56/124 (45%), Gaps = 6/124 (4%)

Query: 345 YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAK 404
           Y   G  + +LGD   A++++ + +++ PD+       G    +LG I++A     +A K
Sbjct: 56  YNNRGLARFQLGDINGAISDYNQAIQLQPDSPLAYNNRGLARFELGDIKEAISDYNQAIK 115

Query: 405 IDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGE 463
           ++P  A+A+ + G   +   D  A +  F   R +  +       E  NN G   FE G+
Sbjct: 116 LEPNYAEAYNNRGNAYVKLGDINAGI--FDYDRAIQFQPNH---AEFYNNRGYARFELGD 170

Query: 464 FESA 467
             + 
Sbjct: 171 INAG 174


>gi|73670356|ref|YP_306371.1| O-linked N-acetylglucosamine transferase [Methanosarcina barkeri
           str. Fusaro]
 gi|72397518|gb|AAZ71791.1| O-linked N-acetylglucosamine transferase [Methanosarcina barkeri
           str. Fusaro]
          Length = 397

 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 69/292 (23%), Positives = 131/292 (44%), Gaps = 22/292 (7%)

Query: 135 GQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS 194
           G   L+ G   +A  AF   +E D DN+  L  +A      G+Y ++L FY++A++++  
Sbjct: 57  GLDFLSCGNFNEAMKAFDKAIEIDPDNIDLLNNKAQALETVGKYDEALGFYEKAIKINAE 116

Query: 195 CPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGM 254
            P  I   +     ++G+  +A +A+++AL+L P+   A    A   L  ++A   +  +
Sbjct: 117 DPD-IWNNMAFSLSQVGKYDEAVKAYEKALELRPDYPNAWYGKA---LNLSQAGDYKAAI 172

Query: 255 EKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARS 314
           E  ++  E       A         + G+   + Q+ +   A+  +         N A +
Sbjct: 173 EAYEKVLEENSDYKEA---------WVGKGIALGQMGKYDEAIIAYDKAIELD-PNFAEA 222

Query: 315 YHSKG-DYEKAGLYYMA-----SVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKV 368
           +H KG D +  G Y  A        E++  ++  +   G+    L+   +  A+  F+K 
Sbjct: 223 WHYKGVDMDSLGSYRQALKAYQKTVELDPENDDAWNNMGIDLENLE--KYDEAIKAFDKA 280

Query: 369 LEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 420
           +EI  +N +     G    Q+ + E+A E  RKA ++DP   +A+  LG +L
Sbjct: 281 IEINSENADVWYNKGFTLSQMQRFEEAAETYRKATQLDPEYLEAYSSLGFVL 332



 Score = 65.5 bits (158), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 72/299 (24%), Positives = 133/299 (44%), Gaps = 10/299 (3%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
           A  +Y KA +I+  +P  W      L   G+ ++A  A++  LE   D   A  G+A   
Sbjct: 103 ALGFYEKAIKINAEDPDIWNNMAFSLSQVGKYDEAVKAYEKALELRPDYPNAWYGKALNL 162

Query: 173 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 232
              G Y  ++E Y++ L+ +     A  +G G+   ++G+  +A  A+ +A++LDP   E
Sbjct: 163 SQAGDYKAAIEAYEKVLEENSDYKEAW-VGKGIALGQMGKYDEAIIAYDKAIELDPNFAE 221

Query: 233 ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTE 292
           A     V     +     R+ ++  Q+  E+ P    A N +        ++    +  +
Sbjct: 222 AWHYKGV---DMDSLGSYRQALKAYQKTVELDPENDDAWNNMGIDLENLEKYDEAIKAFD 278

Query: 293 TALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQ 352
            A+ + +     +  +YN   +      +E+A   Y    K      E++  Y  LG V 
Sbjct: 279 KAIEINSE---NADVWYNKGFTLSQMQRFEEAAETYR---KATQLDPEYLEAYSSLGFVL 332

Query: 353 LKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQ 411
            +L  F  +L  +E+ L++ P+  ++          LG+ E+A+E  RKA +IDPR A+
Sbjct: 333 AQLRRFAESLEIYEQALKLNPEAADSWFGKAVCLSFLGREEEAEEAYRKAVEIDPRYAE 391



 Score = 46.6 bits (109), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 32/125 (25%), Positives = 63/125 (50%), Gaps = 1/125 (0%)

Query: 108 EHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLG 167
           E +  A + ++KA  I+      W  KG  L      E+A+  ++   + D + + A   
Sbjct: 268 EKYDEAIKAFDKAIEINSENADVWYNKGFTLSQMQRFEEAAETYRKATQLDPEYLEAYSS 327

Query: 168 QACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLD 227
              V     R+++SLE Y++AL+++P    +   G  +C   LG+  +A +A+++A+++D
Sbjct: 328 LGFVLAQLRRFAESLEIYEQALKLNPEAADSW-FGKAVCLSFLGREEEAEEAYRKAVEID 386

Query: 228 PENVE 232
           P   E
Sbjct: 387 PRYAE 391


>gi|254410536|ref|ZP_05024315.1| Tetratricopeptide repeat family [Coleofasciculus chthonoplastes PCC
           7420]
 gi|196182742|gb|EDX77727.1| Tetratricopeptide repeat family [Coleofasciculus chthonoplastes PCC
           7420]
          Length = 1491

 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 101/436 (23%), Positives = 175/436 (40%), Gaps = 56/436 (12%)

Query: 51  FKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHF 110
           FK G+ E+     ++  S + D+Y+A  +         LGV    LG+ E      ++  
Sbjct: 323 FKLGRNEEALASFDQVISLQPDDYHAWFK---------LGVALGELGRNEEALASFDQVI 373

Query: 111 ILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQAC 170
            L   YY             W  +G  L   G  E+A + F  V+    D  PA   +  
Sbjct: 374 SLQPDYY-----------PAWDNRGAALFKLGRYEEALANFDQVISLQPDYYPAWDNRGA 422

Query: 171 VEFNRGRYSDSLEFYKRALQVHPS-CPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPE 229
             F  GRY ++L  + + + + P   P     G  L  +KLG+  +A  +F + + L P+
Sbjct: 423 ALFKLGRYEEALANFDQVISLQPDYYPAWDNRGAAL--FKLGRNEEALASFDQVISLQPD 480

Query: 230 NVEALV--ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLV 287
           +  A     +A+ +L  NE A     +    +   + P    A +      F  G++   
Sbjct: 481 DYHAWFKRGVALGELGRNEEA-----LASFDQVISLQPDYYPAWDNRGVVLFELGRN--- 532

Query: 288 EQLTETALAVTNHG----PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIF 343
               E ALA  +      P  S ++ N   +    G +E+A   +  ++    +P ++  
Sbjct: 533 ----EEALANFDQAISLQPDYSSAWNNRGAALFKLGRHEEALTNFDQAISL--QPDDY-H 585

Query: 344 PYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAA 403
            ++  G    KLG    ALTNF++V+ + PD+       G    +LG+ E+A     +  
Sbjct: 586 AWFKRGVALFKLGRHEEALTNFDQVISLQPDDYHAWFKRGVALFKLGRHEEALTNFDQVI 645

Query: 404 KIDPRDAQAF----IDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHF 459
            + P D+ A+    + LGEL    +   AL  F  A +L          +  +N G   F
Sbjct: 646 SLQPDDSSAWDNRGVVLGELGRHEE---ALANFDQAISLQPDY-----YQTWDNRGAALF 697

Query: 460 EKGEFESAHQSFKDAL 475
           + G +E A  +F   +
Sbjct: 698 KLGRYEEALANFDQVI 713



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 82/372 (22%), Positives = 155/372 (41%), Gaps = 40/372 (10%)

Query: 117  YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 176
            +++   +   + S W  +G LL   G  E+A +++  V+    D+  A   +  +    G
Sbjct: 743  FDQVISLQPDDSSAWFNRGVLLGELGRYEEALTSYDQVISLQPDDSSAWFNRGVLLGELG 802

Query: 177  RYSDSLEFYKRALQVHPSC-PGAIRLGIGLCRYKLGQLGKARQA---FQRALQLDPENVE 232
            R+ ++L  Y + + + P   P     G+      LG+LG+ ++A   F + + L P++  
Sbjct: 803  RHKEALTSYDQVISLQPDYYPAWDNRGV-----VLGELGRHKEALANFDQVISLQPDDYH 857

Query: 233  AL----VALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVE 288
            A     VAL  +       A   + +      +  +    +AL  L  H           
Sbjct: 858  AWFKRGVALGELGRYEEALANFDQAISLQPDFYPAWDNRGVALGELGRH----------- 906

Query: 289  QLTETALAVTNHGPTKSHSYY----NLARSYHSKGDYEKAGLYYMASVKE-INKPHEFIF 343
               E ALA  +   +    YY    N        G YE+A    +A+  + I+   +F  
Sbjct: 907  ---EEALANFDQAISLQPDYYPAWDNRGVMLIKLGRYEEA----LANFDQAISLQPDFYQ 959

Query: 344  PYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAA 403
             + G G    +LG +  AL NF++ + + PD  +T    G + ++LG+ E+A   L +A 
Sbjct: 960  AWRGKGVALSELGRYEEALANFDQAISLQPDYYQTWDNRGLVLIKLGRYEEALANLDQAI 1019

Query: 404  KIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGE 463
             + P   QA+ +   +L  S+ G   +A  +   ++    ++   +  +N G    E G 
Sbjct: 1020 SLQPDYYQAWFNRSAML--SNLGRYREALTSDDQVISLQPDDY--QAWHNRGAALGELGR 1075

Query: 464  FESAHQSFKDAL 475
            +E A  +F  A+
Sbjct: 1076 YEEALANFDQAI 1087



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 69/293 (23%), Positives = 124/293 (42%), Gaps = 16/293 (5%)

Query: 131 WVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQ 190
           W  +G  L   G  E+A ++F  V+    D  PA   +  V F  GR  ++L  + +A+ 
Sbjct: 485 WFKRGVALGELGRNEEALASFDQVISLQPDYYPAWDNRGVVLFELGRNEEALANFDQAIS 544

Query: 191 VHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV--ALAVMDLQANEAA 248
           + P    A     G   +KLG+  +A   F +A+ L P++  A     +A+  L  +E A
Sbjct: 545 LQPDYSSAWN-NRGAALFKLGRHEEALTNFDQAISLQPDDYHAWFKRGVALFKLGRHEEA 603

Query: 249 GIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSY 308
                +    +   + P    A        F  G+H   E+       V +  P  S ++
Sbjct: 604 -----LTNFDQVISLQPDDYHAWFKRGVALFKLGRH---EEALTNFDQVISLQPDDSSAW 655

Query: 309 YNLARSYHSKGDYEKAGLYYMASVKE-INKPHEFIFPYYGLGQVQLKLGDFRSALTNFEK 367
            N        G +E+A    +A+  + I+   ++   +   G    KLG +  AL NF++
Sbjct: 656 DNRGVVLGELGRHEEA----LANFDQAISLQPDYYQTWDNRGAALFKLGRYEEALANFDQ 711

Query: 368 VLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 420
           V+ + PD  +     G +  +LG+ ++A     +   + P D+ A+ + G LL
Sbjct: 712 VISLQPDYYQAWDNRGVVLGELGRHKEALANFDQVISLQPDDSSAWFNRGVLL 764



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 87/389 (22%), Positives = 147/389 (37%), Gaps = 68/389 (17%)

Query: 131 WVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQ 190
           W  +G  L   G  E+A + F   +    D       +  V    GR+ ++L  + RA+ 
Sbjct: 179 WFNQGVTLYELGRYEEALAKFDQAISLQPDYYHPWDNRGGVLIKLGRHKEALASFDRAIS 238

Query: 191 VHPSCPGAIRLGIGLCRYKLGQLGKARQA---FQRALQLDPENVEAL--VALAVMDLQAN 245
           + P    A R G G+    LG LG+ ++A     +A+ L P+  +       A+ +L   
Sbjct: 239 LQPDYYQAWR-GRGVV---LGMLGRHKEALANLDQAISLQPDFYKTWDNRGAALGELGRY 294

Query: 246 EAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALA----VTNHG 301
           E A     +    +A  + P  + A N      F  G++       E ALA    V +  
Sbjct: 295 EEA-----LANFDQAISLQPDDSSAWNNRGVVLFKLGRN-------EEALASFDQVISLQ 342

Query: 302 PTKSHSYYNLA-----------------------RSYHSKGDYEKAGLYYMASVKE---- 334
           P   H+++ L                          Y+   D   A L+ +   +E    
Sbjct: 343 PDDYHAWFKLGVALGELGRNEEALASFDQVISLQPDYYPAWDNRGAALFKLGRYEEALAN 402

Query: 335 ----INKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLG 390
               I+   ++   +   G    KLG +  AL NF++V+ + PD        G    +LG
Sbjct: 403 FDQVISLQPDYYPAWDNRGAALFKLGRYEEALANFDQVISLQPDYYPAWDNRGAALFKLG 462

Query: 391 QIEKAQELLRKAAKIDPRDAQAF----IDLGELLISSDTGAALDAFKTARTLLKKAGEEV 446
           + E+A     +   + P D  A+    + LGEL  + +  A+ D   + +     A    
Sbjct: 463 RNEEALASFDQVISLQPDDYHAWFKRGVALGELGRNEEALASFDQVISLQPDYYPA---- 518

Query: 447 PIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
                +N GV+ FE G  E A  +F  A+
Sbjct: 519 ----WDNRGVVLFELGRNEEALANFDQAI 543



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 72/311 (23%), Positives = 125/311 (40%), Gaps = 30/311 (9%)

Query: 117 YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPAL--LGQACVEFN 174
           +++A  +   + S W  +G +L   G  E+A ++F  V+    D+  A   LG A  E  
Sbjct: 301 FDQAISLQPDDSSAWNNRGVVLFKLGRNEEALASFDQVISLQPDDYHAWFKLGVALGEL- 359

Query: 175 RGRYSDSLEFYKRALQVHPS-CPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEA 233
            GR  ++L  + + + + P   P     G  L  +KLG+  +A   F + + L P+   A
Sbjct: 360 -GRNEEALASFDQVISLQPDYYPAWDNRGAAL--FKLGRYEEALANFDQVISLQPDYYPA 416

Query: 234 L--VALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLT 291
                 A+  L   E A     +    +   + P    A +      F  G++       
Sbjct: 417 WDNRGAALFKLGRYEEA-----LANFDQVISLQPDYYPAWDNRGAALFKLGRN------- 464

Query: 292 ETALA----VTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYY- 346
           E ALA    V +  P   H+++    +    G  E+A    +AS  ++       +P + 
Sbjct: 465 EEALASFDQVISLQPDDYHAWFKRGVALGELGRNEEA----LASFDQVISLQPDYYPAWD 520

Query: 347 GLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKID 406
             G V  +LG    AL NF++ + + PD        G    +LG+ E+A     +A  + 
Sbjct: 521 NRGVVLFELGRNEEALANFDQAISLQPDYSSAWNNRGAALFKLGRHEEALTNFDQAISLQ 580

Query: 407 PRDAQAFIDLG 417
           P D  A+   G
Sbjct: 581 PDDYHAWFKRG 591



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 86/412 (20%), Positives = 171/412 (41%), Gaps = 46/412 (11%)

Query: 131  WVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQ 190
            W  +G +L   G  ++A + F  V+    D+  A   +       GRY ++L  + +A+ 
Sbjct: 825  WDNRGVVLGELGRHKEALANFDQVISLQPDDYHAWFKRGVALGELGRYEEALANFDQAIS 884

Query: 191  VHPSC-PGAIRLGIGLCRYKLGQLGKARQA---FQRALQLDPENVEALVALAVMDLQANE 246
            + P   P     G+ L     G+LG+  +A   F +A+ L P+   A     VM ++   
Sbjct: 885  LQPDFYPAWDNRGVAL-----GELGRHEEALANFDQAISLQPDYYPAWDNRGVMLIKLGR 939

Query: 247  AAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLT--ETALAVTNHGPTK 304
                 + +    +A  + P    A         + G+   + +L   E ALA  +   + 
Sbjct: 940  ---YEEALANFDQAISLQPDFYQA---------WRGKGVALSELGRYEEALANFDQAISL 987

Query: 305  SHSYY----NLARSYHSKGDYEKAGLYYMASVKE-INKPHEFIFPYYGLGQVQLKLGDFR 359
               YY    N        G YE+A    +A++ + I+   ++   ++    +   LG +R
Sbjct: 988  QPDYYQTWDNRGLVLIKLGRYEEA----LANLDQAISLQPDYYQAWFNRSAMLSNLGRYR 1043

Query: 360  SALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFID---- 415
             ALT+ ++V+ + PD+ +     G    +LG+ E+A     +A  + P D Q +++    
Sbjct: 1044 EALTSDDQVISLQPDDYQAWHNRGAALGELGRYEEALANFDQAISLRPDDYQDWLNRGIA 1103

Query: 416  LGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
            LGEL    +  A+ D   + +    +A     +  + + G  +F +  F    +  ++  
Sbjct: 1104 LGELGRHEEALASCDQAISLQPDYYQAWSNRGVAAMESFGYEYFWQQNFTDCFRLERNKA 1163

Query: 476  GDGIWLTLLDSKTKTYV------IDASASMLQFKDMQLFHRFENDGNHVELP 521
             D +  TL  +  + Y+      +++S ++L+    + F  F    N +E P
Sbjct: 1164 PDILIPTLKATNREHYLALFQASLNSSIALLK----ETFTDFPKVTNQLEQP 1211



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 84/394 (21%), Positives = 152/394 (38%), Gaps = 41/394 (10%)

Query: 90   GVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASS 149
            GV    LG+ E      ++   L   YY            TW  +G  L   G  E+A +
Sbjct: 659  GVVLGELGRHEEALANFDQAISLQPDYY-----------QTWDNRGAALFKLGRYEEALA 707

Query: 150  AFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYK 209
             F  V+    D   A   +  V    GR+ ++L  + + + + P    A     G+   +
Sbjct: 708  NFDQVISLQPDYYQAWDNRGVVLGELGRHKEALANFDQVISLQPDDSSAW-FNRGVLLGE 766

Query: 210  LGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAM 269
            LG+  +A  ++ + + L P++  A     V+     E    ++ +    +   + P    
Sbjct: 767  LGRYEEALTSYDQVISLQPDDSSAWFNRGVL---LGELGRHKEALTSYDQVISLQPDYYP 823

Query: 270  ALNYLANHFFFTGQHFLVEQLTETALA----VTNHGPTKSHSYYNLARSYHSKGDYEKAG 325
            A +         G+H       + ALA    V +  P   H+++    +    G YE+A 
Sbjct: 824  AWDNRGVVLGELGRH-------KEALANFDQVISLQPDDYHAWFKRGVALGELGRYEEA- 875

Query: 326  LYYMASVKEINKPHEFIFPYYGLGQVQL-KLGDFRSALTNFEKVLEIYPDNCETLKALGH 384
               +A+  +        +P +    V L +LG    AL NF++ + + PD        G 
Sbjct: 876  ---LANFDQAISLQPDFYPAWDNRGVALGELGRHEEALANFDQAISLQPDYYPAWDNRGV 932

Query: 385  IYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTG---AALDAFKTARTLLKK 441
            + ++LG+ E+A     +A  + P   QA+   G  L  S+ G    AL  F  A +L   
Sbjct: 933  MLIKLGRYEEALANFDQAISLQPDFYQAWRGKGVAL--SELGRYEEALANFDQAISLQPD 990

Query: 442  AGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
                   +  +N G++  + G +E A  +   A+
Sbjct: 991  Y-----YQTWDNRGLVLIKLGRYEEALANLDQAI 1019


>gi|340623460|ref|YP_004741913.1| hypothetical protein GYY_01415 [Methanococcus maripaludis X1]
 gi|339903728|gb|AEK19170.1| hypothetical protein GYY_01415 [Methanococcus maripaludis X1]
          Length = 344

 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 71/319 (22%), Positives = 138/319 (43%), Gaps = 20/319 (6%)

Query: 109 HFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQ 168
           +++ +   YN A   +      WV KG  LL  G   ++   F   L  D +N  A  G 
Sbjct: 40  NYVDSISEYNLALLENPKSAEIWVNKGNSLLKLGIYGESRECFNKALLIDSENSEAFNGL 99

Query: 169 ACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDP 228
             V    G Y  +LE Y ++L ++     A +   G+    +    +A + F +++ ++ 
Sbjct: 100 GTVLSKTGNYQKALEMYDKSLNINSENSEAWK-NKGITLTNMQSYSEAIECFDKSISINA 158

Query: 229 ENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVE 288
           +N          D+  N+     K + + +++ + Y    +    +       G  +L  
Sbjct: 159 KN---------SDVWYNKGEAQFK-LGQYEKSIDSYNKALLIDEKMETALLGKGNSYLKL 208

Query: 289 QLTETALAVTNH----GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFP 344
           Q  E+A+   N      P   +  Y  A +Y    ++E A  YY  ++ EIN  +  +  
Sbjct: 209 QNYESAIECFNTAETINPKSEYPPYYKADAYRDTENFEDALKYYDEAL-EINPSNADVLI 267

Query: 345 YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAK 404
             G+   ++K  ++ +A++NF+  ++I P N +     G+ YV L   E +    +KA +
Sbjct: 268 NKGICFDKMK--NYSAAISNFDLAIQIDPKNVQIWILKGNSYVGLKDYESSISCYKKALE 325

Query: 405 IDPR--DAQAFIDLGELLI 421
           I+P+  +A+  ID+ E +I
Sbjct: 326 IEPKNENAKENIDIIEKII 344


>gi|118365798|ref|XP_001016118.1| TPR Domain containing protein [Tetrahymena thermophila]
 gi|89297885|gb|EAR95873.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
          Length = 963

 Score = 69.7 bits (169), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 91/370 (24%), Positives = 159/370 (42%), Gaps = 62/370 (16%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALL---GQA 169
           A QY  KAS+    E + ++  G + L   +++QA   F   +E+D  N   L     Q 
Sbjct: 625 AEQYLLKASQAQGQEQNIYLFLGSIFLKHNKMKQAEYYFLKTIESDPTNFQYLFQIGDQY 684

Query: 170 CVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQ-RALQLDP 228
           C   N  ++ ++  +Y++AL + PS    I   I +  YK+    +  Q F    L+ +P
Sbjct: 685 C---NFEKFEEARFYYQKALNLKPSSEEIILKLISV--YKMCSSTQEIQQFLFEFLEKNP 739

Query: 229 ENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVE 288
           EN  A   +           G  + + K   A                      Q++L  
Sbjct: 740 ENQYAFTLIG----------GYYENIGKFTEA---------------------KQYYL-- 766

Query: 289 QLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK-EINKPHEFIFPYYG 347
                AL +    P    +  +L ++Y + G+ E A  Y+   +K +I+K  E+I     
Sbjct: 767 ----QALQI---NPDNFITICHLIQNYITTGEIENAKSYFEKLLKLKISKDEEYI----S 815

Query: 348 LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 407
           +G  Q++      ++ +F K LEI P N +    L   Y+Q+G+ E+A++   KA K+ P
Sbjct: 816 IGTFQVQFQMIEESIQSFLKALEINPQNSQAHYKLAKSYMQIGRNEEAKKSYFKAFKMYP 875

Query: 408 RDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGV--IHFEKGEFE 465
              QA  D+G+   +S+    ++A K  + +L       P E+  +I +  I+ E  + E
Sbjct: 876 ESEQALQDVGD---NSNNNIPVEAQKYFKKVLSMNN---PRELNCDIKLAYIYLELNQLE 929

Query: 466 SAHQSFKDAL 475
            A   F+ AL
Sbjct: 930 DAKSYFQQAL 939



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 94/423 (22%), Positives = 168/423 (39%), Gaps = 66/423 (15%)

Query: 89  LGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQAS 148
           LG +Y  +GKIE            A Q++ KA  I   + S       LL    + +Q  
Sbjct: 183 LGQFYKKIGKIEE-----------AAQFFQKADEIQPFQDSELNYNIGLLFY--QTKQFQ 229

Query: 149 SAFKIVLEADRD-----NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGI 203
            + K +L+         N   +LGQA ++  + + S+    + +AL++ P     +   +
Sbjct: 230 ESIKCLLKYKEKYPQHFNTNYVLGQAYLQLKQLKESEIC--FLQALEIQPQS-ADVCFSL 286

Query: 204 GLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEI 263
           GL  + L    KA++ F +  + DP+++++   L  +    N+       +   Q+  EI
Sbjct: 287 GLIYFNLKMNEKAQKYFLKVQKTDPKDLDSAFYLGCLYQSDNKQ---EDAIYCFQKVLEI 343

Query: 264 YPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEK 323
            P C  A   L       G+  + ++  + A  +    P    +Y  L   Y   G  ++
Sbjct: 344 IPQCFEANFQLGFSLELIGKVEVAKEYFQKAFEIK---PQSVEAYVQLGIFYLKFGRKDE 400

Query: 324 AGLYYMASVKEINKPHEF-----------IFP---------------YYG---LGQVQLK 354
           A   ++      N P EF           +F                +Y    LG V   
Sbjct: 401 AQQCFIMGFN--NNPKEFESLISENVDSQLFTNLKVQKDLDQVNEKNFYSSLYLGYVYEL 458

Query: 355 LGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFI 414
           +G    A  ++ KVLE+ P+       LG +Y+     ++A+  L+KA  IDP +     
Sbjct: 459 IGRLEDAKKHYFKVLELQPNLLNVNLQLGILYMNEKNEKEAESFLKKAYNIDPNNFDTNT 518

Query: 415 DLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNN--IGVIHFEKGEFESAHQSFK 472
            LG   + ++     + +      ++KA E  P   L N  +G+ + EKG +E A +  +
Sbjct: 519 QLGLFYLQNNRENESNQY------IQKAYEIDPDNYLINYQLGIQYNEKGNYEIAKKYSQ 572

Query: 473 DAL 475
            AL
Sbjct: 573 KAL 575



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 77/353 (21%), Positives = 148/353 (41%), Gaps = 52/353 (14%)

Query: 103 QREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNV 162
           Q   ++ +++  Q Y + + I M         G +  +   +E A + F+  ++ D ++ 
Sbjct: 51  QESAKQKYLIHIQKYPRTTEIHML-------YGLIFQSMKMIEDAKNCFQEAIKIDSNST 103

Query: 163 PALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAF-- 220
            A    A +  +   +S++ +   +AL++  S    +   +G+   K GQL K++  F  
Sbjct: 104 LAYQCLADIYEDSWNFSEAEKHLLKALEI-SSNQIHLNYRLGVLYQKTGQLEKSKTFFLI 162

Query: 221 ----QRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNY--- 273
               ++AL++  ++ ++ + L        +   I +  +  Q+A EI P+    LNY   
Sbjct: 163 YEGQEKALKMKSQDQQSKIQLGQF---YKKIGKIEEAAQFFQKADEIQPFQDSELNYNIG 219

Query: 274 ----------------------LANHF---FFTGQHFL-VEQLTETALAVTNH---GPTK 304
                                    HF   +  GQ +L ++QL E+ +         P  
Sbjct: 220 LLFYQTKQFQESIKCLLKYKEKYPQHFNTNYVLGQAYLQLKQLKESEICFLQALEIQPQS 279

Query: 305 SHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTN 364
           +   ++L   Y +    EKA  Y++   K    P +    +Y LG +         A+  
Sbjct: 280 ADVCFSLGLIYFNLKMNEKAQKYFLKVQK--TDPKDLDSAFY-LGCLYQSDNKQEDAIYC 336

Query: 365 FEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 417
           F+KVLEI P   E    LG     +G++E A+E  +KA +I P+  +A++ LG
Sbjct: 337 FQKVLEIIPQCFEANFQLGFSLELIGKVEVAKEYFQKAFEIKPQSVEAYVQLG 389



 Score = 47.8 bits (112), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 81/373 (21%), Positives = 139/373 (37%), Gaps = 85/373 (22%)

Query: 89  LGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQAS 148
           LG+ Y        ++ EKE     A  +  KA  ID +   T    G   L      +++
Sbjct: 486 LGILYM------NEKNEKE-----AESFLKKAYNIDPNNFDTNTQLGLFYLQNNRENESN 534

Query: 149 SAFKIVLEADRDNVPALLGQACVEFN-RGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCR 207
              +   E D DN   +  Q  +++N +G Y  + ++ ++AL++ P C  A    I L  
Sbjct: 535 QYIQKAYEIDPDNY-LINYQLGIQYNEKGNYEIAKKYSQKALEIKPQCEKAY---ILLGD 590

Query: 208 YKLGQLGKARQAF--QRALQLDPENVEALVALAVMD---LQANEAAGIRKGMEKMQRAFE 262
             L Q  K    F   +A Q++P ++E +  L   +   L+A++A G  +          
Sbjct: 591 IYLNQNMKKEAEFYLMKAYQINPNSLEYVENLEKAEQYLLKASQAQGQEQ---------- 640

Query: 263 IYPYCAMALNYLANHFFFTGQHFL----VEQLTETALAVTNHGPTKSHSYYNLARSYHSK 318
                        N + F G  FL    ++Q     L      PT     + +   Y + 
Sbjct: 641 -------------NIYLFLGSIFLKHNKMKQAEYYFLKTIESDPTNFQYLFQIGDQYCNF 687

Query: 319 GDYEKAGLYYM-----------------------ASVKEINKPHEFIFPYYG-------- 347
             +E+A  YY                        +S +EI    +F+F +          
Sbjct: 688 EKFEEARFYYQKALNLKPSSEEIILKLISVYKMCSSTQEI---QQFLFEFLEKNPENQYA 744

Query: 348 ---LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAK 404
              +G     +G F  A   + + L+I PDN  T+  L   Y+  G+IE A+    K  K
Sbjct: 745 FTLIGGYYENIGKFTEAKQYYLQALQINPDNFITICHLIQNYITTGEIENAKSYFEKLLK 804

Query: 405 IDPRDAQAFIDLG 417
           +     + +I +G
Sbjct: 805 LKISKDEEYISIG 817


>gi|386813873|ref|ZP_10101097.1| conserved hypothetical protein [planctomycete KSU-1]
 gi|386403370|dbj|GAB63978.1| conserved hypothetical protein [planctomycete KSU-1]
          Length = 576

 Score = 69.7 bits (169), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 92/416 (22%), Positives = 169/416 (40%), Gaps = 66/416 (15%)

Query: 59  FRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGK-IETKQREKEEHFILATQYY 117
           F++ LE   S     Y+  + Y +    N L    TYL K I+   +  + HF L   YY
Sbjct: 149 FKESLELNPSATDTNYHVGLLYYK---KNMLDDSITYLKKSIKLDLKNADAHFTLGLVYY 205

Query: 118 NKA----------SRIDMHEPSTWVGK--GQLLLAKGEVEQASSAFKIVLEADRDNVPAL 165
            K+            I+++          G L   +G++E++ +  K  L +D++   A 
Sbjct: 206 TKSLYDKATSEFKQTIELNSKDAEAHNYLGLLYYQQGDLEESIAEHKAALLSDQNYPDAY 265

Query: 166 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 225
                  + +    D+++ +K+ L++ P    A    +GL   +  +   A  + ++A++
Sbjct: 266 NNLGIALYAKNNTKDAIDAFKKTLELQPDFAEA-YFNLGLIYSEENKTKDAVSSLEQAIK 324

Query: 226 LDPENVEALVALAVM----DLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFT 281
           L+P+  EA   L  +    D+Q        + + + ++A +  P  A A    A      
Sbjct: 325 LNPKIAEAHFTLGEIYTKNDMQ-------EEALSEYKKAIDSKPDYAEAYYNYAELNATK 377

Query: 282 GQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEF 341
           G H   ++            P  + +Y+NL  +Y+++GD +KA   ++  V EIN P+++
Sbjct: 378 GMH---DRSIAAWSKTIELNPNNTDAYFNLGIAYYNQGDLDKAISLWI-KVIEIN-PNDY 432

Query: 342 ----------------------------IFP-----YYGLGQVQLKLGDFRSALTNFEKV 368
                                       ++P     YY LG    K   + +AL  +EK 
Sbjct: 433 DALINLADAYNAKGLLDKTIQTWEKITEVYPNHAGLYYKLGNAYAKKNMYNTALVQWEKA 492

Query: 369 LEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSD 424
           +EI P+       LG  Y ++G+ + A E  +K   I+  D  A  +LG L    D
Sbjct: 493 IEIDPNLVNAYYNLGLTYQKIGKWDDAIEAYKKVLDINADDIDAHRNLGLLYKEKD 548



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 120/535 (22%), Positives = 219/535 (40%), Gaps = 76/535 (14%)

Query: 100 ETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADR 159
           E  Q + E H  L   YY      D ++P   + +   LLA      A S +KI   A++
Sbjct: 81  EKIQEDAELHHYLGKIYY------DNNKPDEAIAE---LLA------AVSYYKITQTAEK 125

Query: 160 DNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQA 219
            +    LG A  +  +  +S+SL  +K +L+++PS        +GL  YK   L  +   
Sbjct: 126 ADAYNDLGLAYKD--KNAFSESLTAFKESLELNPSATDT-NYHVGLLYYKKNMLDDSITY 182

Query: 220 FQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFF 279
            +++++LD +N +A   L ++       +   K   + ++  E+    A A NYL     
Sbjct: 183 LKKSIKLDLKNADAHFTLGLVYYT---KSLYDKATSEFKQTIELNSKDAEAHNYLG--LL 237

Query: 280 FTGQHFLVEQLTE--TALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINK 337
           +  Q  L E + E   AL    + P    +Y NL  + ++K + + A     A  K +  
Sbjct: 238 YYQQGDLEESIAEHKAALLSDQNYPD---AYNNLGIALYAKNNTKDA---IDAFKKTLEL 291

Query: 338 PHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQE 397
             +F   Y+ LG +  +    + A+++ E+ +++ P   E    LG IY +    E+A  
Sbjct: 292 QPDFAEAYFNLGLIYSEENKTKDAVSSLEQAIKLNPKIAEAHFTLGEIYTKNDMQEEALS 351

Query: 398 LLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIG 455
             +KA    P  A+A+ +  EL       A       +     K  E  P   +   N+G
Sbjct: 352 EYKKAIDSKPDYAEAYYNYAEL------NATKGMHDRSIAAWSKTIELNPNNTDAYFNLG 405

Query: 456 VIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTY-----VIDA-SASMLQFKDMQLFH 509
           + ++ +G+ + A           +W+ +++     Y     + DA +A  L  K +Q   
Sbjct: 406 IAYYNQGDLDKAI---------SLWIKVIEINPNDYDALINLADAYNAKGLLDKTIQ--- 453

Query: 510 RFENDGNHVELPWNKVTVLF-NLARLLEQIHDTVAASVLYRLILFKYQ-------DYVDA 561
                       W K+T ++ N A L  ++ +  A   +Y   L +++       + V+A
Sbjct: 454 -----------TWEKITEVYPNHAGLYYKLGNAYAKKNMYNTALVQWEKAIEIDPNLVNA 502

Query: 562 YLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF 616
           Y  L    +       +IE   + L +N    +A   LG L  + D  V+A+  F
Sbjct: 503 YYNLGLTYQKIGKWDDAIEAYKKVLDINADDIDAHRNLGLLYKEKDMHVEAESEF 557



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 97/454 (21%), Positives = 176/454 (38%), Gaps = 70/454 (15%)

Query: 345 YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAK 404
           Y  LG        F  +LT F++ LE+ P   +T   +G +Y +   ++ +   L+K+ K
Sbjct: 129 YNDLGLAYKDKNAFSESLTAFKESLELNPSATDTNYHVGLLYYKKNMLDDSITYLKKSIK 188

Query: 405 IDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGE 463
           +D ++A A   LG +  + S    A   FK    L  K  E       N +G++++++G+
Sbjct: 189 LDLKNADAHFTLGLVYYTKSLYDKATSEFKQTIELNSKDAE-----AHNYLGLLYYQQGD 243

Query: 464 FESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWN 523
            E +                        + +  A++L             D N+ +  +N
Sbjct: 244 LEES------------------------IAEHKAALLS------------DQNYPD-AYN 266

Query: 524 KVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVN 583
                 NL   L   ++T  A   ++  L    D+ +AY  L  I    N  + ++  + 
Sbjct: 267 ------NLGIALYAKNNTKDAIDAFKKTLELQPDFAEAYFNLGLIYSEENKTKDAVSSLE 320

Query: 584 EALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAAL 643
           +A+K+N K   A   LG++  KND     +E       A D K  YA      +NY A L
Sbjct: 321 QAIKLNPKIAEAHFTLGEIYTKND---MQEEALSEYKKAIDSKPDYAE---AYYNY-AEL 373

Query: 644 RNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQE 703
              K        H +++   +++ I  + +N  A    G+    +G  D +  L+ +V E
Sbjct: 374 NATK------GMH-DRSIAAWSKTIELNPNNTDAYFNLGIAYYNQGDLDKAISLWIKVIE 426

Query: 704 AASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEA 763
                      D  INLA  Y A+G     ++ ++       Y   A +   L   + + 
Sbjct: 427 INPNDY-----DALINLADAYNAKGLLDKTIQTWEKITE--VYPNHAGLYYKLGNAYAKK 479

Query: 764 EQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKF 797
             +        +AI + P+     ++ G+  QK 
Sbjct: 480 NMYNTALVQWEKAIEIDPNLVNAYYNLGLTYQKI 513


>gi|83814061|ref|YP_446792.1| hypothetical protein SRU_2700 [Salinibacter ruber DSM 13855]
 gi|83755455|gb|ABC43568.1| TPR repeat protein [Salinibacter ruber DSM 13855]
          Length = 554

 Score = 69.7 bits (169), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 81/324 (25%), Positives = 141/324 (43%), Gaps = 25/324 (7%)

Query: 126 HEPSTWVGKGQL------LLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYS 179
           ++PS +   G L         +GE+E A      ++E       A + +  +  N GR  
Sbjct: 114 NDPSAYFDSGDLEEIASFYFEEGEMETALEVIDRLIELHPYTSDAWMRRGILLNNLGRPE 173

Query: 180 DSLEFYKRALQVHPS-CPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA 238
           ++LE Y++AL V+P+     I LGI L    LG++ +A +A+  AL ++P + EAL  L 
Sbjct: 174 EALEAYEQALDVNPTDTETLINLGITLD--SLGRVDEALEAYDEALSINPLHGEALFNLG 231

Query: 239 VMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVT 298
           V  L+ +E   +   +E  QR  ++YP        L   +   G+        ++  A  
Sbjct: 232 VT-LERDEQ--LEAAVEAFQRCADVYPEHPEVWYELGYCYDRLGED------EKSVEAYD 282

Query: 299 NH---GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKL 355
           NH    P    ++YN     +  G + +A   Y  ++   +   EF   YY  G  +   
Sbjct: 283 NHLDIDPYSKDAWYNRGIVLNRLGRFGEAVESYDMALAIHD---EFASAYYNRGNAEANQ 339

Query: 356 GDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFID 415
           GD  +A+ ++E+VLE+   +  T   L   Y + G +  A+    K   +     +A+  
Sbjct: 340 GDLEAAVESYERVLELEGPDAATYYNLALAYEEQGDLRAARTYYEKTLDLKSNYPEAWYG 399

Query: 416 LGELLISSD-TGAALDAFKTARTL 438
           LG    + +    AL+ F+ A  L
Sbjct: 400 LGCCFDTDERPEEALECFRYAVNL 423



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 77/287 (26%), Positives = 123/287 (42%), Gaps = 14/287 (4%)

Query: 123 IDMHEPST---WVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYS 179
           I++H P T   W+ +G LL   G  E+A  A++  L+ +  +   L+       + GR  
Sbjct: 149 IELH-PYTSDAWMRRGILLNNLGRPEEALEAYEQALDVNPTDTETLINLGITLDSLGRVD 207

Query: 180 DSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAV 239
           ++LE Y  AL ++P   G     +G+   +  QL  A +AFQR   + PE+ E    L  
Sbjct: 208 EALEAYDEALSINP-LHGEALFNLGVTLERDEQLEAAVEAFQRCADVYPEHPEVWYELGY 266

Query: 240 MDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTN 299
              +  E     K +E      +I PY   A           G+     +  + ALA+ +
Sbjct: 267 CYDRLGED---EKSVEAYDNHLDIDPYSKDAWYNRGIVLNRLGRFGEAVESYDMALAIHD 323

Query: 300 HGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFR 359
                + +YYN   +  ++GD E A   Y   V E+  P      YY L     + GD R
Sbjct: 324 E---FASAYYNRGNAEANQGDLEAAVESY-ERVLELEGPDAAT--YYNLALAYEEQGDLR 377

Query: 360 SALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKID 406
           +A T +EK L++  +  E    LG  +    + E+A E  R A  +D
Sbjct: 378 AARTYYEKTLDLKSNYPEAWYGLGCCFDTDERPEEALECFRYAVNLD 424



 Score = 46.6 bits (109), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 58/235 (24%), Positives = 103/235 (43%), Gaps = 20/235 (8%)

Query: 246 EAAGIRKGMEKMQRAFEIYPYCA---MALNYLANHFFFTGQHFLVEQLTETALAVTNHGP 302
           E   +   +E + R  E++PY +   M    L N+    G+     +  E AL V    P
Sbjct: 134 EEGEMETALEVIDRLIELHPYTSDAWMRRGILLNNL---GRPEEALEAYEQALDVN---P 187

Query: 303 TKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPH-EFIFPYYGLGQVQLKLGDFRSA 361
           T + +  NL  +  S G  ++A   Y  ++  IN  H E +F    LG    +     +A
Sbjct: 188 TDTETLINLGITLDSLGRVDEALEAYDEALS-INPLHGEALF---NLGVTLERDEQLEAA 243

Query: 362 LTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLI 421
           +  F++  ++YP++ E    LG+ Y +LG+ EK+ E       IDP    A+ + G +L 
Sbjct: 244 VEAFQRCADVYPEHPEVWYELGYCYDRLGEDEKSVEAYDNHLDIDPYSKDAWYNRGIVLN 303

Query: 422 S-SDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
                G A++++  A  +  +           N G     +G+ E+A +S++  L
Sbjct: 304 RLGRFGEAVESYDMALAIHDEFA-----SAYYNRGNAEANQGDLEAAVESYERVL 353



 Score = 45.8 bits (107), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 81/352 (23%), Positives = 137/352 (38%), Gaps = 47/352 (13%)

Query: 307 SYYNLARSYHSKGDYEKAGLYY-----MASVKEINKPHEFIFPYYG-----LGQVQLKLG 356
           +Y N   +Y   GD E+   +Y     M +  E+      + PY        G +   LG
Sbjct: 111 AYENDPSAYFDSGDLEEIASFYFEEGEMETALEVIDRLIELHPYTSDAWMRRGILLNNLG 170

Query: 357 DFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDL 416
               AL  +E+ L++ P + ETL  LG     LG++++A E   +A  I+P   +A  +L
Sbjct: 171 RPEEALEAYEQALDVNPTDTETLINLGITLDSLGRVDEALEAYDEALSINPLHGEALFNL 230

Query: 417 GELLISSDT-GAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSF---- 471
           G  L   +   AA++AF+    +      E P EV   +G  +   GE E + +++    
Sbjct: 231 GVTLERDEQLEAAVEAFQRCADVYP----EHP-EVWYELGYCYDRLGEDEKSVEAYDNHL 285

Query: 472 ------KDALGD-GIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNH------- 517
                 KDA  + GI L  L    +   +++    L   D +    + N GN        
Sbjct: 286 DIDPYSKDAWYNRGIVLNRLGRFGE--AVESYDMALAIHD-EFASAYYNRGNAEANQGDL 342

Query: 518 ----------VELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAA 567
                     +EL        +NLA   E+  D  AA   Y   L    +Y +A+  L  
Sbjct: 343 EAAVESYERVLELEGPDAATYYNLALAYEEQGDLRAARTYYEKTLDLKSNYPEAWYGLGC 402

Query: 568 IAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAA 619
                   + ++E    A+ ++   P   +   D   K     +A E+++ A
Sbjct: 403 CFDTDERPEEALECFRYAVNLDANVPKFWTARADCAYKVGKLDEALESYQHA 454



 Score = 45.8 bits (107), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 48/219 (21%), Positives = 89/219 (40%), Gaps = 28/219 (12%)

Query: 70  EIDEYYADVRYERIAILNALGVY--------------------YTYLGKIETKQREKEEH 109
           +ID Y  D  Y R  +LN LG +                    Y   G  E  Q + E  
Sbjct: 286 DIDPYSKDAWYNRGIVLNRLGRFGEAVESYDMALAIHDEFASAYYNRGNAEANQGDLE-- 343

Query: 110 FILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQA 169
              A + Y +   ++  + +T+         +G++  A + ++  L+   +   A  G  
Sbjct: 344 --AAVESYERVLELEGPDAATYYNLALAYEEQGDLRAARTYYEKTLDLKSNYPEAWYGLG 401

Query: 170 CVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPE 229
           C      R  ++LE ++ A+ +  + P         C YK+G+L +A +++Q A++LD  
Sbjct: 402 CCFDTDERPEEALECFRYAVNLDANVP-KFWTARADCAYKVGKLDEALESYQHAVRLDES 460

Query: 230 NVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCA 268
           N  A    A   L+  +     + +E  ++A E+ P  A
Sbjct: 461 NEHAWTGYAETLLEKEQP---EEALEAYRQALELDPKSA 496



 Score = 41.6 bits (96), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 63/313 (20%), Positives = 121/313 (38%), Gaps = 18/313 (5%)

Query: 105 EKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPA 164
           E++E    A + + + + +    P  W   G      GE E++  A+   L+ D  +  A
Sbjct: 235 ERDEQLEAAVEAFQRCADVYPEHPEVWYELGYCYDRLGEDEKSVEAYDNHLDIDPYSKDA 294

Query: 165 LLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRAL 224
              +  V    GR+ +++E Y  AL +H     A     G      G L  A ++++R L
Sbjct: 295 WYNRGIVLNRLGRFGEAVESYDMALAIHDEFASAY-YNRGNAEANQGDLEAAVESYERVL 353

Query: 225 QLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQH 284
           +L+  +      LA+   +  +    R   EK       YP            ++  G  
Sbjct: 354 ELEGPDAATYYNLALAYEEQGDLRAARTYYEKTLDLKSNYP----------EAWYGLGCC 403

Query: 285 FLVEQLTETALAV----TNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHE 340
           F  ++  E AL       N        +   A   +  G  ++A   Y  +V+ +++ +E
Sbjct: 404 FDTDERPEEALECFRYAVNLDANVPKFWTARADCAYKVGKLDEALESYQHAVR-LDESNE 462

Query: 341 FIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLR 400
               + G  +  L+      AL  + + LE+ P +  T        + LG+ +++   L+
Sbjct: 463 HA--WTGYAETLLEKEQPEEALEAYRQALELDPKSANTYFRQAKALLALGRADESIRALK 520

Query: 401 KAAKIDPRDAQAF 413
            A ++DP   + F
Sbjct: 521 TAFRLDPAKKEEF 533


>gi|333986950|ref|YP_004519557.1| hypothetical protein MSWAN_0723 [Methanobacterium sp. SWAN-1]
 gi|333825094|gb|AEG17756.1| Tetratricopeptide TPR_1 repeat-containing protein [Methanobacterium
           sp. SWAN-1]
          Length = 401

 Score = 69.7 bits (169), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 87/362 (24%), Positives = 153/362 (42%), Gaps = 41/362 (11%)

Query: 54  GKVEQFRQILE-EGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFIL 112
           GK+E + + LE    + E+D  Y +V Y +          YT++ K+E K RE       
Sbjct: 57  GKLENYPESLECYDKALELDPNYFNVWYNKG---------YTFV-KLE-KYRE------- 98

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
           A + Y+KA  +D +    W  KG  L   GE  +A   +   LE D +       +    
Sbjct: 99  ALECYDKALELDPNYFGVWFNKGYALTELGEYLEALECYDEALELDPNYFGVWFNKGYAL 158

Query: 173 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 232
              G YS++++ Y  AL + PS         G    KL +  +A +++ +AL+++P+   
Sbjct: 159 TELGEYSEAVKSYDTALGIDPS-DATTWYNRGNILTKLKKYVEAIESYDKALEINPKFTY 217

Query: 233 ALVA--LAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQL 290
           A      A+ +L+ +  A     +E   +A EI P   +A           G++    + 
Sbjct: 218 AWTGRGSALTELKKHLEA-----VESYDKALEIDPKHVLAWFNRGYSLAALGKYLEAVKS 272

Query: 291 TETALAVTNHGP----TKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYY 346
            + AL +    P    +K ++   L +   +   Y+KA      ++  I+         Y
Sbjct: 273 YDRALEIDPGDPITWFSKGYALAELGKYSDALESYDKA-----LAIDPIDS-----IALY 322

Query: 347 GLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKID 406
               + L++G +  AL +F+K LEI PD        G  + +L   ++A +   KA K+D
Sbjct: 323 NKANIMLEIGKYPEALESFDKALEIDPDYVNAWNDKGETFTKLENYQEALKCYEKALKLD 382

Query: 407 PR 408
           P 
Sbjct: 383 PN 384



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 80/333 (24%), Positives = 140/333 (42%), Gaps = 38/333 (11%)

Query: 117 YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 176
           YNK  + D++  + W GKG +L       ++   +   LE D +       +        
Sbjct: 35  YNKILQTDLYYTNAWYGKGVVLGKLENYPESLECYDKALELDPNYFNVWYNKGYTFVKLE 94

Query: 177 RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDP-------- 228
           +Y ++LE Y +AL++ P+  G +    G    +LG+  +A + +  AL+LDP        
Sbjct: 95  KYREALECYDKALELDPNYFG-VWFNKGYALTELGEYLEALECYDEALELDPNYFGVWFN 153

Query: 229 ---------ENVEAL----VALAVMDLQA-------NEAAGIRK---GMEKMQRAFEIYP 265
                    E  EA+     AL +    A       N    ++K    +E   +A EI P
Sbjct: 154 KGYALTELGEYSEAVKSYDTALGIDPSDATTWYNRGNILTKLKKYVEAIESYDKALEINP 213

Query: 266 YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAG 325
               A     +      +H    +  + AL +    P    +++N   S  + G Y +A 
Sbjct: 214 KFTYAWTGRGSALTELKKHLEAVESYDKALEID---PKHVLAWFNRGYSLAALGKYLEAV 270

Query: 326 LYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 385
             Y  ++ EI+ P + I  ++  G    +LG +  AL +++K L I P +   L    +I
Sbjct: 271 KSYDRAL-EID-PGDPI-TWFSKGYALAELGKYSDALESYDKALAIDPIDSIALYNKANI 327

Query: 386 YVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGE 418
            +++G+  +A E   KA +IDP    A+ D GE
Sbjct: 328 MLEIGKYPEALESFDKALEIDPDYVNAWNDKGE 360



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 74/334 (22%), Positives = 136/334 (40%), Gaps = 51/334 (15%)

Query: 106 KEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPAL 165
           K E++  + + Y+KA  +D +  + W  KG   +   +  +A   +   LE D +     
Sbjct: 58  KLENYPESLECYDKALELDPNYFNVWYNKGYTFVKLEKYREALECYDKALELDPNYFGVW 117

Query: 166 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 225
             +       G Y ++LE Y  AL++ P+  G +    G    +LG+  +A +++  AL 
Sbjct: 118 FNKGYALTELGEYLEALECYDEALELDPNYFG-VWFNKGYALTELGEYSEAVKSYDTALG 176

Query: 226 LDPENVEALVALAVMDLQANEAAGIRK---GMEKMQRAFEIYPYCAMALNYLANHFFFTG 282
           +DP +            + N    ++K    +E   +A EI P    A         +TG
Sbjct: 177 IDPSDATTWYN------RGNILTKLKKYVEAIESYDKALEINPKFTYA---------WTG 221

Query: 283 QHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFI 342
           +   + +L +   AV +                     Y+KA         EI+  H  +
Sbjct: 222 RGSALTELKKHLEAVES---------------------YDKA--------LEIDPKH--V 250

Query: 343 FPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKA 402
             ++  G     LG +  A+ ++++ LEI P +  T  + G+   +LG+   A E   KA
Sbjct: 251 LAWFNRGYSLAALGKYLEAVKSYDRALEIDPGDPITWFSKGYALAELGKYSDALESYDKA 310

Query: 403 AKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTA 435
             IDP D+ A  +   +++       AL++F  A
Sbjct: 311 LAIDPIDSIALYNKANIMLEIGKYPEALESFDKA 344



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 78/333 (23%), Positives = 147/333 (44%), Gaps = 39/333 (11%)

Query: 55  KVEQFRQILE-EGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILA 113
           K+E++R+ LE    + E+D  Y  V + +   L  LG Y                  + A
Sbjct: 92  KLEKYREALECYDKALELDPNYFGVWFNKGYALTELGEY------------------LEA 133

Query: 114 TQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEF 173
            + Y++A  +D +    W  KG  L   GE  +A  ++   L  D  +      +  +  
Sbjct: 134 LECYDEALELDPNYFGVWFNKGYALTELGEYSEAVKSYDTALGIDPSDATTWYNRGNILT 193

Query: 174 NRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEA 233
              +Y +++E Y +AL+++P    A   G G    +L +  +A +++ +AL++DP++V A
Sbjct: 194 KLKKYVEAIESYDKALEINPKFTYAWT-GRGSALTELKKHLEAVESYDKALEIDPKHVLA 252

Query: 234 LVALAVMDLQANEAAGIRKGMEKMQ---RAFEIYPYCAMALNYLANHFFFT--GQHFLVE 288
                    +    A + K +E ++   RA EI P     + + +  +     G++    
Sbjct: 253 WFN------RGYSLAALGKYLEAVKSYDRALEIDP--GDPITWFSKGYALAELGKYSDAL 304

Query: 289 QLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGL 348
           +  + ALA+    P  S + YN A      G Y +A L       EI+   +++  +   
Sbjct: 305 ESYDKALAID---PIDSIALYNKANIMLEIGKYPEA-LESFDKALEIDP--DYVNAWNDK 358

Query: 349 GQVQLKLGDFRSALTNFEKVLEIYPDNCETLKA 381
           G+   KL +++ AL  +EK L++ P+  + LKA
Sbjct: 359 GETFTKLENYQEALKCYEKALKLDPNFEDALKA 391



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 79/360 (21%), Positives = 139/360 (38%), Gaps = 62/360 (17%)

Query: 123 IDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSL 182
            D  + ++ + K   L  +G+ ++A   +  +L+ D     A  G+  V      Y +SL
Sbjct: 7   FDSFKKNSLIKKAYNLTEQGKYQEALGCYNKILQTDLYYTNAWYGKGVVLGKLENYPESL 66

Query: 183 EFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDL 242
           E Y +AL++ P+    +    G    KL +  +A + + +AL+LDP              
Sbjct: 67  ECYDKALELDPNYFN-VWYNKGYTFVKLEKYREALECYDKALELDPNYFGVWFNKGYA-- 123

Query: 243 QANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG- 301
              E     + +E    A E+ P      NY    F    + + + +L E + AV ++  
Sbjct: 124 -LTELGEYLEALECYDEALELDP------NYFGVWF---NKGYALTELGEYSEAVKSYDT 173

Query: 302 -----PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLG 356
                P+ + ++YN                                      G +  KL 
Sbjct: 174 ALGIDPSDATTWYNR-------------------------------------GNILTKLK 196

Query: 357 DFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDL 416
            +  A+ +++K LEI P         G    +L +  +A E   KA +IDP+   A+ + 
Sbjct: 197 KYVEAIESYDKALEINPKFTYAWTGRGSALTELKKHLEAVESYDKALEIDPKHVLAWFNR 256

Query: 417 GELLISSDTGAALDAFKT-ARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
           G  L +   G  L+A K+  R L    G+  PI   +  G    E G++  A +S+  AL
Sbjct: 257 GYSLAA--LGKYLEAVKSYDRALEIDPGD--PITWFSK-GYALAELGKYSDALESYDKAL 311



 Score = 43.5 bits (101), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 40/139 (28%), Positives = 62/139 (44%), Gaps = 18/139 (12%)

Query: 345 YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAK 404
           +YG G V  KL ++  +L  ++K LE+ P+        G+ +V+L +  +A E   KA +
Sbjct: 49  WYGKGVVLGKLENYPESLECYDKALELDPNYFNVWYNKGYTFVKLEKYREALECYDKALE 108

Query: 405 IDP-------RDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVI 457
           +DP           A  +LGE L       AL+ +  A  L     +     V  N G  
Sbjct: 109 LDPNYFGVWFNKGYALTELGEYL------EALECYDEALEL-----DPNYFGVWFNKGYA 157

Query: 458 HFEKGEFESAHQSFKDALG 476
             E GE+  A +S+  ALG
Sbjct: 158 LTELGEYSEAVKSYDTALG 176


>gi|20092504|ref|NP_618579.1| hypothetical protein MA3704 [Methanosarcina acetivorans C2A]
 gi|19917772|gb|AAM07059.1| TPR-domain containing protein [Methanosarcina acetivorans C2A]
          Length = 1004

 Score = 69.7 bits (169), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 85/333 (25%), Positives = 139/333 (41%), Gaps = 23/333 (6%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
           A + + KA   D    S    KG  L      E+A  AF+ VLE D ++  AL       
Sbjct: 50  ALEAFEKALAFDPDNVSARYFKGLTLGYLNLPERALEAFERVLEKDPEHSGALYYSGLAL 109

Query: 173 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 232
              G+++++      AL+++P  PGA     G   Y LG+  +A +AF+  L L+P +  
Sbjct: 110 NQLGKHTEAASALSGALEINPENPGAWYY-RGESLYILGKSAEALKAFEETLALEPSHAG 168

Query: 233 ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTE 292
           A    A   L        R+ ++  ++A ++ P  A A           G+        E
Sbjct: 169 AWEGKAKAYLSLGRK---REALKASEKALKLKPSSAEAWETQGKIMESIGKKEEALGAFE 225

Query: 293 TALAVTNHGPTKSHSYYNLARSYHSKGDYEKA------GLYYMASVKEINKPHEFIFPYY 346
            +L +    P  + +     +   S G YE+A       L+  +S+ E            
Sbjct: 226 RSLVLE---PMNAGNVMEKGKLLGSLGRYEEALEAFESSLWMDSSLSEAKIKR------- 275

Query: 347 GLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKID 406
             G+  L LG+F+ AL +F K LE  P+N E     G  ++  G+  +A +   KA  I+
Sbjct: 276 --GKTLLALGNFQQALDSFRKNLEEDPENFENWGGTGSCFLAFGKYYEAMKAYEKALSIE 333

Query: 407 PRDAQAFIDLGELLIS-SDTGAALDAFKTARTL 438
           P ++     +GE+     D   AL+AF+ A  L
Sbjct: 334 PENSCIMSGIGEIYYQLGDYSRALEAFEQALRL 366



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 161/709 (22%), Positives = 265/709 (37%), Gaps = 103/709 (14%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
           A    + A  I+   P  W  +G+ L   G+  +A  AF+  L  +  +  A  G+A   
Sbjct: 118 AASALSGALEINPENPGAWYYRGESLYILGKSAEALKAFEETLALEPSHAGAWEGKAKAY 177

Query: 173 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 232
            + GR  ++L+  ++AL++ PS   A     G     +G+  +A  AF+R+L L+P N  
Sbjct: 178 LSLGRKREALKASEKALKLKPSSAEAWETQ-GKIMESIGKKEEALGAFERSLVLEPMN-- 234

Query: 233 ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLV----- 287
              A  VM     E   +   + + + A E +       + L+      G+  L      
Sbjct: 235 ---AGNVM-----EKGKLLGSLGRYEEALEAFESSLWMDSSLSEAKIKRGKTLLALGNFQ 286

Query: 288 -------EQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHE 340
                  + L E      N G T S  +    + Y +   YEKA          I   + 
Sbjct: 287 QALDSFRKNLEEDPENFENWGGTGS-CFLAFGKYYEAMKAYEKA--------LSIEPENS 337

Query: 341 FIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLR 400
            I    G+G++  +LGD+  AL  FE+ L +  +N       G++  +LG+ ++A E   
Sbjct: 338 CIMS--GIGEIYYQLGDYSRALEAFEQALRLDIENGFAWNGKGNVLCKLGKYQEALEAYE 395

Query: 401 KAAKIDPRDAQAFIDLGELLIS-----SDTGAALD-----AFKTARTLLKKAGEE-VPIE 449
               +D     A  + G  L        +    L+     AFK    L  K  E+ +  E
Sbjct: 396 SLLTLDYESLPARYNRGVALSKLKARQKEEEKTLENKLQAAFKKYLELSGKLPEDKIGAE 455

Query: 450 VLNNIGVIHFEKGEFESAHQSFKDAL----GD-------GIWLTLLDSKTKTYVIDASAS 498
                G+   E GE++ A Q+F  A     GD       GI L  L    +   +   A 
Sbjct: 456 GWKYRGLAFAELGEYKEALQAFDRAARYSSGDVYPLACLGITLICLGEYEEALQVFEQAE 515

Query: 499 MLQFKDMQLFHRFE-NDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQD 557
            L +  +      E  +    E+ W               +       VL RL   K   
Sbjct: 516 ELFYASVGAEKTGEPGEEREAEMSWT--------------LDAAEKKPVLERLRTAK-GF 560

Query: 558 YVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFR 617
            +DA  R  A          S+E    A K++G    A S  G + +  ++W KA E F 
Sbjct: 561 ALDALGRYEA----------SLEAFESARKLSGNGKIACSGKGLVFVHCEEWKKALEAFD 610

Query: 618 AASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYA 677
                 D KD+ A +       FA +R +            KA E+  RV  +      +
Sbjct: 611 TVL-IFDPKDTPAAVM----KAFALIRFQ---------EFGKAIEVLERVTAEDKCPDLS 656

Query: 678 ANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMY 737
           +   G   A +G FD +   + +  EA   ++  +       LA +YF  GN   A+K  
Sbjct: 657 SCLLGFACARQGDFDRALKAYRKAIEANPKNIHARN-----GLAEIYFRLGNSRGALKEL 711

Query: 738 QNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTL 786
           +  + +   N  ++ L    R   E + ++D  +S   A+ L P +  L
Sbjct: 712 EASIAEAPENAFSRNL--KGRVELEEQAYEDALESFGLALALDPEDQRL 758



 Score = 41.2 bits (95), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 43/185 (23%), Positives = 77/185 (41%), Gaps = 41/185 (22%)

Query: 77  DVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQ 136
            +  E   I++ +G  Y  LG            +  A + + +A R+D+     W GKG 
Sbjct: 331 SIEPENSCIMSGIGEIYYQLG-----------DYSRALEAFEQALRLDIENGFAWNGKGN 379

Query: 137 LLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLE------------- 183
           +L   G+ ++A  A++ +L  D +++PA        +NRG     L+             
Sbjct: 380 VLCKLGKYQEALEAYESLLTLDYESLPA-------RYNRGVALSKLKARQKEEEKTLENK 432

Query: 184 ---FYKRALQVHPSCPGAIRLGI------GLCRYKLGQLGKARQAFQRALQLDPENVEAL 234
               +K+ L++    P   ++G       GL   +LG+  +A QAF RA +    +V  L
Sbjct: 433 LQAAFKKYLELSGKLP-EDKIGAEGWKYRGLAFAELGEYKEALQAFDRAARYSSGDVYPL 491

Query: 235 VALAV 239
             L +
Sbjct: 492 ACLGI 496


>gi|33864077|ref|NP_895637.1| hypothetical protein PMT1810 [Prochlorococcus marinus str. MIT
           9313]
 gi|33635661|emb|CAE21985.1| TPR repeat [Prochlorococcus marinus str. MIT 9313]
          Length = 691

 Score = 69.7 bits (169), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 89/358 (24%), Positives = 163/358 (45%), Gaps = 36/358 (10%)

Query: 123 IDMHEPSTWVGKGQLLLAKGEVEQASSAFKI-VLEADRDNVPAL-LGQACVEFNRGRYSD 180
           ++  EP++    G +   +G ++QA    +  + E D   +P + LG   V    G++ +
Sbjct: 35  VNPKEPNSLHLLGCIYKDRGNLQQAFDLIQASIREDDSTPIPFINLGNILVMV--GQHEE 92

Query: 181 SLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVM 240
           +   ++++LQ +   P +     G    ++G + +A+QA++  LQL+  +  A   L   
Sbjct: 93  AARIFQQSLQRNQQIPESW-FCFGNALREIGNVQEAKQAYRNTLQLNAAHAGAASILGA- 150

Query: 241 DLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 300
            L A+E        EK+  + EI+     A     N     G+  L+E   E   A+  +
Sbjct: 151 -LLADE--------EKLDESEEIFSKAIEASPQDVNLRINYGK--LLEDKYEYNAALEQY 199

Query: 301 ------GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKE-INKPHEFIFPYYGLGQVQL 353
                  P     + N A +   +G  E+A    +AS +  I    +F   Y+GLG V  
Sbjct: 200 RFALLLAPESPELHLNFASALKKEGKVEEA----IASCRNAIELRPDFEAAYFGLGIVLK 255

Query: 354 KLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAF 413
           + G+F  A  ++ K +++ PD  +    LGH++   G+ E+A+   R A  + P  A A+
Sbjct: 256 ENGEFEEAKASYRKAIDLKPDFADAYLNLGHVFKDHGEAEEAKASYRTAIDLKPDFADAY 315

Query: 414 IDLGELLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQ 469
           ++LG +L   + G   +A  + R    KA E  P  ++   N+G +  ++GE E A Q
Sbjct: 316 LNLGNIL--KEEGDVEEAIASYR----KAIELKPDFVDAYLNLGTVLNDEGEVEEARQ 367



 Score = 56.2 bits (134), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 72/346 (20%), Positives = 144/346 (41%), Gaps = 32/346 (9%)

Query: 91  VYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSA 150
           + +  LG I     + EE    A + + ++ + +   P +W   G  L   G V++A  A
Sbjct: 75  IPFINLGNILVMVGQHEE----AARIFQQSLQRNQQIPESWFCFGNALREIGNVQEAKQA 130

Query: 151 FKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 210
           ++  L+ +  +  A      +  +  +  +S E + +A++  P     +R+  G      
Sbjct: 131 YRNTLQLNAAHAGAASILGALLADEEKLDESEEIFSKAIEASPQDVN-LRINYGKLLEDK 189

Query: 211 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRK------GMEKMQRAFEIY 264
            +   A + ++ AL L PE+ E         L  N A+ ++K       +   + A E+ 
Sbjct: 190 YEYNAALEQYRFALLLAPESPE---------LHLNFASALKKEGKVEEAIASCRNAIELR 240

Query: 265 PYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 324
           P    A   L       G+    E+   +     +  P  + +Y NL   +   G+ E+A
Sbjct: 241 PDFEAAYFGLGIVLKENGE---FEEAKASYRKAIDLKPDFADAYLNLGHVFKDHGEAEEA 297

Query: 325 GLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGH 384
              Y  ++    KP +F   Y  LG +  + GD   A+ ++ K +E+ PD  +    LG 
Sbjct: 298 KASYRTAIDL--KP-DFADAYLNLGNILKEEGDVEEAIASYRKAIELKPDFVDAYLNLGT 354

Query: 385 IYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALD 430
           +    G++E+A++++     ++       I+   LL++S +   LD
Sbjct: 355 VLNDEGEVEEARQIVSALYNLN------VIEESSLLVTSSSNLVLD 394



 Score = 47.0 bits (110), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 70/335 (20%), Positives = 146/335 (43%), Gaps = 21/335 (6%)

Query: 302 PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSA 361
           P + +S + L   Y  +G+ ++A     AS++E +       P+  LG + + +G    A
Sbjct: 37  PKEPNSLHLLGCIYKDRGNLQQAFDLIQASIREDDSTP---IPFINLGNILVMVGQHEEA 93

Query: 362 LTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLI 421
              F++ L+      E+    G+   ++G +++A++  R   +++   A A   LG LL 
Sbjct: 94  ARIFQQSLQRNQQIPESWFCFGNALREIGNVQEAKQAYRNTLQLNAAHAGAASILGALL- 152

Query: 422 SSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDALGDGI 479
                A  +    +  +  KA E  P  + +  N G +  +K E+ +A + ++ AL    
Sbjct: 153 -----ADEEKLDESEEIFSKAIEASPQDVNLRINYGKLLEDKYEYNAALEQYRFAL---- 203

Query: 480 WLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIH 539
              LL  ++    ++ ++++   K+ ++     +  N +EL  +     F L  +L++  
Sbjct: 204 ---LLAPESPELHLNFASALK--KEGKVEEAIASCRNAIELRPDFEAAYFGLGIVLKENG 258

Query: 540 DTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSML 599
           +   A   YR  +    D+ DAYL L  + K     + +      A+ +   + +A   L
Sbjct: 259 EFEEAKASYRKAIDLKPDFADAYLNLGHVFKDHGEAEEAKASYRTAIDLKPDFADAYLNL 318

Query: 600 GDLELKNDDWVKAKETFRAASD-ATDGKDSYATLS 633
           G++  +  D  +A  ++R A +   D  D+Y  L 
Sbjct: 319 GNILKEEGDVEEAIASYRKAIELKPDFVDAYLNLG 353



 Score = 45.4 bits (106), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 62/276 (22%), Positives = 117/276 (42%), Gaps = 30/276 (10%)

Query: 367 KVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTG 426
           ++L + P    +L  LG IY   G +++A +L++ + + D      FI+LG +L+    G
Sbjct: 31  QILSVNPKEPNSLHLLGCIYKDRGNLQQAFDLIQASIREDDSTPIPFINLGNILVM--VG 88

Query: 427 AALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL--------GDG 478
              +A +  +  L++  +++P E     G    E G  + A Q++++ L           
Sbjct: 89  QHEEAARIFQQSLQR-NQQIP-ESWFCFGNALREIGNVQEAKQAYRNTLQLNAAHAGAAS 146

Query: 479 IWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQI 538
           I   LL  + K   +D S  +                  +E     V +  N  +LLE  
Sbjct: 147 ILGALLADEEK---LDESEEIFS--------------KAIEASPQDVNLRINYGKLLEDK 189

Query: 539 HDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSM 598
           ++  AA   YR  L    +  + +L  A+  K    ++ +I     A+++   +  A   
Sbjct: 190 YEYNAALEQYRFALLLAPESPELHLNFASALKKEGKVEEAIASCRNAIELRPDFEAAYFG 249

Query: 599 LGDLELKNDDWVKAKETFRAASD-ATDGKDSYATLS 633
           LG +  +N ++ +AK ++R A D   D  D+Y  L 
Sbjct: 250 LGIVLKENGEFEEAKASYRKAIDLKPDFADAYLNLG 285



 Score = 44.7 bits (104), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 68/322 (21%), Positives = 125/322 (38%), Gaps = 62/322 (19%)

Query: 308 YYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEK 367
           + NL       G +E+A   +  S++   +  E    ++  G    ++G+ + A   +  
Sbjct: 77  FINLGNILVMVGQHEEAARIFQQSLQRNQQIPE---SWFCFGNALREIGNVQEAKQAYRN 133

Query: 368 VLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISS-DTG 426
            L++   +      LG +     ++++++E+  KA +  P+D    I+ G+LL    +  
Sbjct: 134 TLQLNAAHAGAASILGALLADEEKLDESEEIFSKAIEASPQDVNLRINYGKLLEDKYEYN 193

Query: 427 AALDAFKTARTL--------------LKKAG--EEVPIEVLNNI-------------GVI 457
           AAL+ ++ A  L              LKK G  EE      N I             G++
Sbjct: 194 AALEQYRFALLLAPESPELHLNFASALKKEGKVEEAIASCRNAIELRPDFEAAYFGLGIV 253

Query: 458 HFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDG-- 515
             E GEFE A  S++ A+             K    DA         + L H F++ G  
Sbjct: 254 LKENGEFEEAKASYRKAI-----------DLKPDFADAY--------LNLGHVFKDHGEA 294

Query: 516 --------NHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAA 567
                     ++L  +      NL  +L++  D   A   YR  +    D+VDAYL L  
Sbjct: 295 EEAKASYRTAIDLKPDFADAYLNLGNILKEEGDVEEAIASYRKAIELKPDFVDAYLNLGT 354

Query: 568 IAKARNNLQLSIELVNEALKVN 589
           +      ++ + ++V+    +N
Sbjct: 355 VLNDEGEVEEARQIVSALYNLN 376


>gi|326428775|gb|EGD74345.1| hypothetical protein PTSG_06355 [Salpingoeca sp. ATCC 50818]
          Length = 1374

 Score = 69.3 bits (168), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 90/371 (24%), Positives = 159/371 (42%), Gaps = 62/371 (16%)

Query: 91   VYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHE-----PSTWVGK---GQLLLAKG 142
            + Y  LG++     E +  F  AT+Y+ K+ +I + +     P T V     G++L  KG
Sbjct: 845  ITYDCLGQV----YEHKGEFNRATEYFEKSLKIKLEKLGDSNPGTVVTYNHLGRVLSQKG 900

Query: 143  EVEQASSAFK----IVLEADRDNVPA------LLGQACVEFNRGRYSDSLEFYKRALQVH 192
            E ++A+  F+    + L+   ++ P+       +GQ  V F +G YS +  ++KR+L++ 
Sbjct: 901  EYDRAAELFEKDLAVTLQMHGEDHPSTATTVDCIGQ--VYFYKGEYSTAETYFKRSLRIK 958

Query: 193  PSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPE--NVEALVALAVMDLQANEAAGI 250
                G +          L  +   ++ F RAL+L  +  ++E  V        AN    I
Sbjct: 959  QKVLGEMHRETATTYDNLANIALNKRDFVRALELFNKCLDIEKQVLGEQHPTVANTITNI 1018

Query: 251  ----------RKGMEKMQRAFEI--------YPYCAMALNYLANHFFFTGQHFLVEQLTE 292
                      ++ +  +++AF I        +P  A  ++ L   F   G      Q  E
Sbjct: 1019 GQVHTQLGQYQRALACLEQAFAIQTQTVGVVHPNAATTVDSLGTVFAEIGDQGRAIQCFE 1078

Query: 293  TAL-----AVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASV----KEINKPH-EFI 342
             AL      V    P  + + Y +A+++ S G+ E+A  +Y  S+      + + H +  
Sbjct: 1079 QALNVWLDTVGEQHPNTAATLYEIAQAHRSMGNVEEAAQFYQRSLGIYTAVLGERHPDLA 1138

Query: 343  FPYYGLGQVQLKLGDFRSALTNFEKVLEI--------YPDNCETLKALGHIYVQLGQIEK 394
              Y GL Q+ L  GD+ +AL   EK L+I        +PD   T     H +V  G +++
Sbjct: 1139 TVYSGLTQLALDCGDYDTALRYLEKDLDISLDAHGEQHPDVGTTYAQYAHAHVGKGDLDR 1198

Query: 395  AQELLRKAAKI 405
            A E   K+  I
Sbjct: 1199 ALECGEKSLAI 1209



 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 96/404 (23%), Positives = 165/404 (40%), Gaps = 56/404 (13%)

Query: 153 IVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL-- 210
           +V E   D   AL     V F R  Y  + E   R L+V  +  G     I +   +L  
Sbjct: 541 VVGEQHMDTASALHSIGEVHFYRSEYDLAREHLHRCLRVRLATCGQQHPEIAMTYLELSD 600

Query: 211 -----GQLGKARQAFQRAL--------QLDPENVEALVALAVMDLQANEAAGIRKGMEKM 257
                G+  +A +    AL        +L P    A  +L V+   A+ A    K M   
Sbjct: 601 VYDSAGETARAHEYATTALAILQRTVGELHPYTANANHSLGVL---ASGAGDYDKAMAFA 657

Query: 258 QRAFEI--------YPYCAMALNYLANHFFFTGQHFLVEQLTETAL-----AVTNHGPTK 304
           ++  EI        +P  A    +++      G +    + TETAL     +V  H P  
Sbjct: 658 EKDLEISRASLGDMHPDVAATYLHISEILDNKGDYTRARECTETALRILRASVGEHHPRT 717

Query: 305 SHSYYNLARSYHSKGDYEKAGLYYMASVK---EI--NKPHEFIFPYYGLGQVQLKLGDFR 359
           + +Y +  R Y S G Y+ A   Y  S++   E+  +  H     Y  +GQ+   +  + 
Sbjct: 718 ALAYRSYGRIYDSMGQYDDALEQYKTSLRITLEVLGDTNHFTAIVYNSMGQLYKAMCKYD 777

Query: 360 SALTNFEKVLEI--------YPDNCETLKALGHIYVQLGQIEKAQEL----LRKAAKID- 406
            A+  FEK LEI        +P    +   +G +Y   G+ ++A EL    LR A +++ 
Sbjct: 778 DAIACFEKDLEITRKLVGENHPSTGASYNTMGQVYDDKGEYDRAIELYEKDLRIALRVNG 837

Query: 407 ---PRDAQAFIDLGELL-ISSDTGAALDAF-KTARTLLKKAGEEVPIEVL--NNIGVIHF 459
              P  A  +  LG++     +   A + F K+ +  L+K G+  P  V+  N++G +  
Sbjct: 838 ESHPSTAITYDCLGQVYEHKGEFNRATEYFEKSLKIKLEKLGDSNPGTVVTYNHLGRVLS 897

Query: 460 EKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFK 503
           +KGE++ A + F+  L   + +   D  +    +D    +  +K
Sbjct: 898 QKGEYDRAAELFEKDLAVTLQMHGEDHPSTATTVDCIGQVYFYK 941



 Score = 41.2 bits (95), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 130/641 (20%), Positives = 232/641 (36%), Gaps = 152/641 (23%)

Query: 302  PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY-----YGLGQVQLKLG 356
            P  + +Y  L+  Y S G+  +A  Y   ++  + +    + PY     + LG +    G
Sbjct: 589  PEIAMTYLELSDVYDSAGETARAHEYATTALAILQRTVGELHPYTANANHSLGVLASGAG 648

Query: 357  DFRSALTNFEKVLEI--------YPDNCETLKALGHIYVQLGQIEKAQELLRKAAKI--- 405
            D+  A+   EK LEI        +PD   T   +  I    G   +A+E    A +I   
Sbjct: 649  DYDKAMAFAEKDLEISRASLGDMHPDVAATYLHISEILDNKGDYTRARECTETALRILRA 708

Query: 406  -----DPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFE 460
                  PR A A+   G +  S   G   DA +  +T L+     + +EVL +    HF 
Sbjct: 709  SVGEHHPRTALAYRSYGRIYDS--MGQYDDALEQYKTSLR-----ITLEVLGDTN--HFT 759

Query: 461  KGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVEL 520
               + S  Q +K                         +M ++ D      FE D      
Sbjct: 760  AIVYNSMGQLYK-------------------------AMCKYDDA--IACFEKD------ 786

Query: 521  PWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIE 580
                   L    +L+ + H +  AS                Y  +  +   +     +IE
Sbjct: 787  -------LEITRKLVGENHPSTGAS----------------YNTMGQVYDDKGEYDRAIE 823

Query: 581  LVNE----ALKVNGK-YPNA---LSMLGDLELKNDDWVKAKETFRAA--------SDATD 624
            L  +    AL+VNG+ +P+       LG +     ++ +A E F  +         D+  
Sbjct: 824  LYEKDLRIALRVNGESHPSTAITYDCLGQVYEHKGEFNRATEYFEKSLKIKLEKLGDSNP 883

Query: 625  GKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTR---VIVQ-----HTSNLY 676
            G       ++  +N+   + ++K          ++A EL+ +   V +Q     H S   
Sbjct: 884  G-------TVVTYNHLGRVLSQK-------GEYDRAAELFEKDLAVTLQMHGEDHPSTAT 929

Query: 677  AANGAGVVLAEKGQFDVSKDLFTQ---VQEAASGSVFVQMPDVWINLAHVYFAQGNFALA 733
              +  G V   KG++  ++  F +   +++   G +  +    + NLA++   + +F  A
Sbjct: 930  TVDCIGQVYFYKGEYSTAETYFKRSLRIKQKVLGEMHRETATTYDNLANIALNKRDFVRA 989

Query: 734  MKMYQNCLR------KFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLR 787
            ++++  CL          + T A  +  + + H +  Q+Q     L +A  +        
Sbjct: 990  LELFNKCLDIEKQVLGEQHPTVANTITNIGQVHTQLGQYQRALACLEQAFAIQTQT---- 1045

Query: 788  FDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGFDEKKINT 847
                V +   +A+T      T D + +  AE+ +  R       A N+ L    E+  NT
Sbjct: 1046 ----VGVVHPNAAT------TVDSLGTVFAEIGDQGRAIQCFEQALNVWLDTVGEQHPNT 1095

Query: 848  HVEYCKHLLDAAKIHREAAEREE-QQNRQRQEAARQAALAE 887
                   L + A+ HR     EE  Q  QR      A L E
Sbjct: 1096 AAT----LYEIAQAHRSMGNVEEAAQFYQRSLGIYTAVLGE 1132


>gi|72382932|ref|YP_292287.1| TPR repeat-containing protein [Prochlorococcus marinus str. NATL2A]
 gi|72002782|gb|AAZ58584.1| TPR repeat [Prochlorococcus marinus str. NATL2A]
          Length = 685

 Score = 69.3 bits (168), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 83/343 (24%), Positives = 152/343 (44%), Gaps = 30/343 (8%)

Query: 135 GQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS 194
           G +L + G++++A  + +  +E   D   A L    +  + G+  ++   Y++A++++P 
Sbjct: 86  GIILKSLGKLQEAELSTRKAIEIKPDYAKAHLNLGIILSDLGKLEEAELSYRKAIELNPD 145

Query: 195 CPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGM 254
              A    +G+    LG+L +A  ++ +A++L+P   EA   L            I K +
Sbjct: 146 FAEA-HYNLGIILSDLGKLEEAELSYCKAIELNPNFAEAHSNLG----------NILKDL 194

Query: 255 EKMQRA-------FEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALA---VTNHGPTK 304
            K+Q A        E+ P  A A      H+        + +L E  L+        P  
Sbjct: 195 GKLQEAELSYRKTIELNPDFADA------HYNLGVLLKELGKLEEAELSYRKAIELNPDF 248

Query: 305 SHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTN 364
           ++++YNL       G  E+A L    ++K   KP ++   +Y LG +  +LG  + A  +
Sbjct: 249 ANAHYNLGIILKDLGKLEEAELSCRKAIKI--KP-DYADSHYNLGVLLKELGKLQEAELS 305

Query: 365 FEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSD 424
           + K +E+ PD       LG I   LG++E+A+   RKA KI P  A A+  +  +  S +
Sbjct: 306 YRKAIELNPDFANAHYNLGIILKDLGKLEEAELSCRKAIKIKPDYAIAYYSISLIKYSDE 365

Query: 425 TGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESA 467
                D   +   L+ K+ E+          ++H EK   ES+
Sbjct: 366 NNIWQDQLFSKNILINKSQEDQVYIYFARANILHKEKQYEESS 408



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 79/310 (25%), Positives = 140/310 (45%), Gaps = 22/310 (7%)

Query: 295 LAVTNHGPTKS--HSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQ 352
           + +T + P+K       N A  +HS+G+  +A   Y   + ++ K H  +F  YG+  + 
Sbjct: 33  ITITTNTPSKPSKEQIINQALKFHSQGNISEAAKLYQYFIDKVFKDHR-VFSNYGI--IL 89

Query: 353 LKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQA 412
             LG  + A  +  K +EI PD  +    LG I   LG++E+A+   RKA +++P  A+A
Sbjct: 90  KSLGKLQEAELSTRKAIEIKPDYAKAHLNLGIILSDLGKLEEAELSYRKAIELNPDFAEA 149

Query: 413 FIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQS 470
             +LG  +I SD G      + A     KA E  P   E  +N+G I  + G+ + A  S
Sbjct: 150 HYNLG--IILSDLGK----LEEAELSYCKAIELNPNFAEAHSNLGNILKDLGKLQEAELS 203

Query: 471 FKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFN 530
           ++  +   +     D+     V+      L+  + +L +R       +EL  +     +N
Sbjct: 204 YRKTIE--LNPDFADAHYNLGVLLKELGKLE--EAELSYR-----KAIELNPDFANAHYN 254

Query: 531 LARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNG 590
           L  +L+ +     A +  R  +    DY D++  L  + K    LQ +     +A+++N 
Sbjct: 255 LGIILKDLGKLEEAELSCRKAIKIKPDYADSHYNLGVLLKELGKLQEAELSYRKAIELNP 314

Query: 591 KYPNALSMLG 600
            + NA   LG
Sbjct: 315 DFANAHYNLG 324



 Score = 39.7 bits (91), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 39/195 (20%), Positives = 91/195 (46%), Gaps = 8/195 (4%)

Query: 135 GQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS 194
           G LL   G++E+A  +++  +E + D   A      +  + G+  ++    ++A+++ P 
Sbjct: 222 GVLLKELGKLEEAELSYRKAIELNPDFANAHYNLGIILKDLGKLEEAELSCRKAIKIKPD 281

Query: 195 CPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVM--DLQANEAAGIRK 252
              +    +G+   +LG+L +A  ++++A++L+P+   A   L ++  DL   E A +  
Sbjct: 282 YADS-HYNLGVLLKELGKLQEAELSYRKAIELNPDFANAHYNLGIILKDLGKLEEAELS- 339

Query: 253 GMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLA 312
                ++A +I P  A+A   ++   +    +   +QL    + +      + + Y+  A
Sbjct: 340 ----CRKAIKIKPDYAIAYYSISLIKYSDENNIWQDQLFSKNILINKSQEDQVYIYFARA 395

Query: 313 RSYHSKGDYEKAGLY 327
              H +  YE++  Y
Sbjct: 396 NILHKEKQYEESSTY 410


>gi|344198703|ref|YP_004783029.1| hypothetical protein Acife_0495 [Acidithiobacillus ferrivorans SS3]
 gi|343774147|gb|AEM46703.1| Tetratricopeptide TPR_2 repeat-containing protein
           [Acidithiobacillus ferrivorans SS3]
          Length = 545

 Score = 69.3 bits (168), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 71/291 (24%), Positives = 127/291 (43%), Gaps = 23/291 (7%)

Query: 137 LLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCP 196
           LLL +    +A  A + VL    DN  ++     +   +   S++   +++AL + P+ P
Sbjct: 236 LLLYQNRYSEAEDAIRKVLSLMPDNAESIFVLGAISVGKKCLSEAEMAFRKALSIKPAYP 295

Query: 197 GAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEK 256
            A+ + +G+     G++ +A   F++AL + P   EAL+ L V       A G +  M++
Sbjct: 296 EAL-MNLGVMLSDQGRMDEAIGTFRKALIIKPGYREALMRLGV-------ALGYQGRMDE 347

Query: 257 ----MQRAFEI---YPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYY 309
               +++A  I   YP   M L  +  H    G+    E L   ALA+    P    +  
Sbjct: 348 AESTLRKALAIKSDYPEAIMNLGVILGH---EGRWEETETLLRQALAIK---PDYPEALM 401

Query: 310 NLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVL 369
           NL  +   +G         +     I   H        LG    K G +  A T   + +
Sbjct: 402 NLGAALSKQGRCLDEAETILRQALAIQPDHADAL--VNLGATLNKQGRWDEAETILRQAV 459

Query: 370 EIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 420
            I P++ + L  LG +  + G++++A+ +LR+A  I P    A ++LG +L
Sbjct: 460 AIKPEHADALINLGAVLSKQGRLDEAETILRQAIAIKPDQVDALVNLGVIL 510



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 91/370 (24%), Positives = 150/370 (40%), Gaps = 33/370 (8%)

Query: 116 YYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNR 175
           ++  A   D     TW     LL   G +++ASSA +  L  D++   A  G      N 
Sbjct: 113 FFQTALSSDPKNGKTWANYMMLLYNTGRIQEASSALQQSLAIDKNFSLAFEGVYNQALNL 172

Query: 176 GRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV 235
             + D +E   R L    + P      +G    + G L  A +    AL ++  NV AL 
Sbjct: 173 QCWRD-VENILRNLIAIKNSPSNEMAMLGEVLRRQGNLLDAERVLYDALNINENNVAALH 231

Query: 236 ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFL--VEQLTET 293
            L+V+ L  N  +   +  + +++   + P  A ++  L       G+  L   E     
Sbjct: 232 NLSVLLLYQNRYS---EAEDAIRKVLSLMPDNAESIFVLG--AISVGKKCLSEAEMAFRK 286

Query: 294 ALAVTNHGPTKSHSYYNLARSYHSKGDYEKA-GLYYMASVKEINKPHEFIFPYYGLGQVQ 352
           AL++    P    +  NL      +G  ++A G +  A +         I P Y    ++
Sbjct: 287 ALSIK---PAYPEALMNLGVMLSDQGRMDEAIGTFRKALI---------IKPGYREALMR 334

Query: 353 LKL-----GDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 407
           L +     G    A +   K L I  D  E +  LG I    G+ E+ + LLR+A  I P
Sbjct: 335 LGVALGYQGRMDEAESTLRKALAIKSDYPEAIMNLGVILGHEGRWEETETLLRQALAIKP 394

Query: 408 RDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFE 465
              +A ++LG  L  S  G  LD    A T+L++A    P   + L N+G    ++G ++
Sbjct: 395 DYPEALMNLGAAL--SKQGRCLD---EAETILRQALAIQPDHADALVNLGATLNKQGRWD 449

Query: 466 SAHQSFKDAL 475
            A    + A+
Sbjct: 450 EAETILRQAV 459



 Score = 39.7 bits (91), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 99/444 (22%), Positives = 176/444 (39%), Gaps = 65/444 (14%)

Query: 386 YVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDA---FKTARTLLKKA 442
           Y Q G++++A++L R      P  A+   ++G  +++S TG   DA   F+TA +   K 
Sbjct: 67  YHQTGRLKEAEQLYRNILVEQPNHAEVNSNMG--VLASQTGRVNDALYFFQTALSSDPKN 124

Query: 443 GEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALG---------DGIWLTLLDSKTKTYVI 493
           G+        N  ++ +  G  + A  + + +L          +G++   L+ +    V 
Sbjct: 125 GK-----TWANYMMLLYNTGRIQEASSALQQSLAIDKNFSLAFEGVYNQALNLQCWRDVE 179

Query: 494 DASASMLQFKD------MQLFHRFENDGNHVE----------LPWNKVTVLFNLARLLEQ 537
           +   +++  K+        L       GN ++          +  N V  L NL+ LL  
Sbjct: 180 NILRNLIAIKNSPSNEMAMLGEVLRRQGNLLDAERVLYDALNINENNVAALHNLSVLLLY 239

Query: 538 IHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALS 597
            +    A    R +L    D  ++   L AI+  +  L  +     +AL +   YP AL 
Sbjct: 240 QNRYSEAEDAIRKVLSLMPDNAESIFVLGAISVGKKCLSEAEMAFRKALSIKPAYPEALM 299

Query: 598 MLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHL 657
            LG +        +A  TFR A     G    A + LG      AL  + R  + E+T L
Sbjct: 300 NLGVMLSDQGRMDEAIGTFRKALIIKPGYRE-ALMRLG-----VALGYQGRMDEAEST-L 352

Query: 658 EKA---KELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMP 714
            KA   K  Y   I+    NL      GV+L  +G+++ ++ L  Q       ++    P
Sbjct: 353 RKALAIKSDYPEAIM----NL------GVILGHEGRWEETETLLRQAL-----AIKPDYP 397

Query: 715 DVWINLAHVYFAQGNFALAMKMYQNCLRK-FYYNTD-AQILLYLARTHYEAEQWQDCKKS 772
           +  +NL      QG     +   +  LR+      D A  L+ L  T  +  +W + +  
Sbjct: 398 EALMNLGAALSKQGR---CLDEAETILRQALAIQPDHADALVNLGATLNKQGRWDEAETI 454

Query: 773 LLRAIHLAPSNYTLRFDAGVAMQK 796
           L +A+ + P +     + G  + K
Sbjct: 455 LRQAVAIKPEHADALINLGAVLSK 478


>gi|340504470|gb|EGR30909.1| tpr repeat protein [Ichthyophthirius multifiliis]
          Length = 1212

 Score = 69.3 bits (168), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 91/386 (23%), Positives = 169/386 (43%), Gaps = 38/386 (9%)

Query: 99   IETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEAD 158
            IE +Q EK      A  Y+++A +ID +       KG  L    + E+AS  F+ ++  +
Sbjct: 654  IEIQQYEK------AISYFDQALKIDQYNIEAQFNKGICLNLIKKFEKASQCFQNIINME 707

Query: 159  RDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQ 218
             +N  A L Q     N  +Y  SLE   +A+ ++ +   AI +   +   ++ Q  +A +
Sbjct: 708  PNNQKAYLNQGICLKNLFQYQQSLECLNKAILLNENDFQAIFIKAKVLN-EIKQYQEAIE 766

Query: 219  AFQRALQLDPENVEALVALAV--MDL-QANEAAGIRKGMEKMQRAF-EIYPYCAMALNYL 274
             ++RAL+LD +N E   +L +   +L Q  EA        +  ++F E Y Y  +A    
Sbjct: 767  YYKRALKLDCKNYEVFYSLGISFYNLEQFQEAINYFDETIQFNQSFLEAYFYRGVA---- 822

Query: 275  ANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKE 334
                FF  Q +  ++  ++   V    P    +Y     S+     YE + L Y  +   
Sbjct: 823  ----FFNIQKY--DEAIDSFQKVIEINPDYLEAYIYKGNSFKKLQKYECSLLCYEEA--- 873

Query: 335  INKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK 394
            ++K  E+   Y+  G + + L  ++ ++  FE++L     + E     G    +  + ++
Sbjct: 874  LSKNPEYEIAYFNKGNILIHLQQYQESIFCFEQILSKNIKHAEAHYQKGIALKEQKKFKE 933

Query: 395  AQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPI-----E 449
            A E   KA +I+ +  QA+         ++ G AL   +  +  +K   + + I     E
Sbjct: 934  AIESFEKAIEINEKYYQAY---------NNQGIALTEIQEYQKAMKCYEKAIKINKNYAE 984

Query: 450  VLNNIGVIHFEKGEFESAHQSFKDAL 475
              NN G+I F   EF  A + ++ A+
Sbjct: 985  AYNNKGIILFFLNEFTDAIKCYQKAI 1010



 Score = 56.6 bits (135), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 70/346 (20%), Positives = 135/346 (39%), Gaps = 57/346 (16%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
           A ++Y KA   D         KG + +   + E+A+  F   +  D+ +      +    
Sbjct: 121 AIKFYEKA---DPQNCLVQKNKGNIFMNLRKYEEANKCFDQAILLDKQDFECYYNKGNSL 177

Query: 173 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 232
                Y +++++Y++A++++P+   A     G       +  +A   F++A++++P   E
Sbjct: 178 TKLKMYKEAIQYYEKAIEINPNYSNA-YFNKGNILISFQKNVEAFIQFEKAIKINPHFFE 236

Query: 233 ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTE 292
           A           N    I    +K Q A + Y +C        N +F  G  + +    E
Sbjct: 237 AY----------NNRGNILFYQKKYQEAIDSYQFCIQINPNFPNAYFNQGNVYKILVQYE 286

Query: 293 TALAVTNH----GPTKSHSYYNLARSYHSKGDYEKAGLY--------------------- 327
            A+   N      P  + +YY   +  +    YE A LY                     
Sbjct: 287 KAIFCYNKCITLNPNDTSAYYKKGKILNLLKKYEDAILYLDKAISLNPYFIKAYKIKAEV 346

Query: 328 ------------YMASVKEINKPH-EFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPD 374
                        +  V E++K + +++      GQ+ +KL  +++++  FEK+L+IYP 
Sbjct: 347 LKNQRKYDDALIILEKVIEVDKQNLKYLIK---QGQLLMKLKQYQNSIDCFEKILQIYPL 403

Query: 375 NCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 420
                + +G  Y  L + EKA     K   +D +D   F  +G +L
Sbjct: 404 QENIFQYIGKNYYYLEKYEKALFYFEKI--VDNKDFDIFFFIGNIL 447



 Score = 48.1 bits (113), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 65/310 (20%), Positives = 129/310 (41%), Gaps = 20/310 (6%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
           A QYY KA  I+ +  + +  KG +L++  +  +A   F+  ++ +     A   +  + 
Sbjct: 186 AIQYYEKAIEINPNYSNAYFNKGNILISFQKNVEAFIQFEKAIKINPHFFEAYNNRGNIL 245

Query: 173 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 232
           F + +Y ++++ Y+  +Q++P+ P A     G     L Q  KA   + + + L+P +  
Sbjct: 246 FYQKKYQEAIDSYQFCIQINPNFPNA-YFNQGNVYKILVQYEKAIFCYNKCITLNPNDTS 304

Query: 233 ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALN----YLANHFFFTGQHFLVE 288
           A      +    N        +  + +A  + PY   A       L N   +     ++E
Sbjct: 305 AYYKKGKI---LNLLKKYEDAILYLDKAISLNPYFIKAYKIKAEVLKNQRKYDDALIILE 361

Query: 289 QLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGL 348
           ++ E       +   +      L +  +S   +EK        + +I    E IF Y  +
Sbjct: 362 KVIEVDKQNLKYLIKQGQLLMKLKQYQNSIDCFEK--------ILQIYPLQENIFQY--I 411

Query: 349 GQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPR 408
           G+    L  +  AL  FEK+++    + +    +G+I  +L + EKA E   KA  I+  
Sbjct: 412 GKNYYYLEKYEKALFYFEKIVD--NKDFDIFFFIGNILKKLEKFEKAIEYYEKAQLINQN 469

Query: 409 DAQAFIDLGE 418
           D   ++  G+
Sbjct: 470 DYYIYLQKGD 479



 Score = 48.1 bits (113), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 45/176 (25%), Positives = 77/176 (43%), Gaps = 17/176 (9%)

Query: 287 VEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYY 346
           V Q  E  L +  +       Y  +   +    +Y++A LY+  S+ EIN+ + +   Y 
Sbjct: 50  VIQYQEKILQINENSDNNFFIYNKVGNIFIEIQEYKQAILYFKKSL-EINQNNSY--AYI 106

Query: 347 GLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKID 406
            +G +   L  F  A+  +EK     P NC   K  G+I++ L + E+A +   +A  +D
Sbjct: 107 SIGNILNTLNKFNEAIKFYEKAD---PQNCLVQKNKGNIFMNLRKYEEANKCFDQAILLD 163

Query: 407 PRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKG 462
            +D + + + G  L        L  +K A    +KA     IE+  N    +F KG
Sbjct: 164 KQDFECYYNKGNSL------TKLKMYKEAIQYYEKA-----IEINPNYSNAYFNKG 208



 Score = 43.5 bits (101), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 73/374 (19%), Positives = 153/374 (40%), Gaps = 18/374 (4%)

Query: 105 EKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPA 164
           +K E F  A +YY KA  I+ ++   ++ KG      G+  +A S +   ++ +      
Sbjct: 448 KKLEKFEKAIEYYEKAQLINQNDYYIYLQKGDCYFFLGKFLEAISCYDQAIQINEIFQDP 507

Query: 165 LLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRAL 224
              +    +    +S++++ Y++ ++++P    +    IG     L +   A   +++AL
Sbjct: 508 FFNKGNAFYYLQNFSEAIKCYQKVIEINPQDFKSYN-NIGNSFQNLKKYKDAAFNYEKAL 566

Query: 225 QLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQH 284
            ++   +E L     + +   E    ++ +    +  EI  +   +L    N  FF  Q+
Sbjct: 567 SINKFYIEGLFNKGSLLI---EIRSFQEAINCYDQILEISNFNVASLYNKGNILFFYLQN 623

Query: 285 FLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK--EINKPHEFI 342
           +  E +      +         ++ N++++      YEKA  Y+  ++K  + N   +F 
Sbjct: 624 Y-QESIKCYEEIIQKRNSYLLQTFINVSKALIEIQQYEKAISYFDQALKIDQYNIEAQF- 681

Query: 343 FPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKA 402
                 G     +  F  A   F+ ++ + P+N +     G     L Q +++ E L KA
Sbjct: 682 ----NKGICLNLIKKFEKASQCFQNIINMEPNNQKAYLNQGICLKNLFQYQQSLECLNKA 737

Query: 403 AKIDPRDAQA-FIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEK 461
             ++  D QA FI    L        A++ +K A  L  K       EV  ++G+  +  
Sbjct: 738 ILLNENDFQAIFIKAKVLNEIKQYQEAIEYYKRALKLDCK-----NYEVFYSLGISFYNL 792

Query: 462 GEFESAHQSFKDAL 475
            +F+ A   F + +
Sbjct: 793 EQFQEAINYFDETI 806



 Score = 41.2 bits (95), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 122/594 (20%), Positives = 228/594 (38%), Gaps = 129/594 (21%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
           A  Y +KA  ++ +    +  K ++L  + + + A    + V+E D+ N+  L+ Q  + 
Sbjct: 322 AILYLDKAISLNPYFIKAYKIKAEVLKNQRKYDDALIILEKVIEVDKQNLKYLIKQGQLL 381

Query: 173 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 232
               +Y +S++ +++ LQ++P      +  IG   Y L +  KA   F++ +  D ++ +
Sbjct: 382 MKLKQYQNSIDCFEKILQIYPLQENIFQY-IGKNYYYLEKYEKALFYFEKIV--DNKDFD 438

Query: 233 ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALN------YL--ANHFFFTGQH 284
               +            I K +EK ++A E Y   A  +N      YL   + +FF G+ 
Sbjct: 439 IFFFIG----------NILKKLEKFEKAIEYYEK-AQLINQNDYYIYLQKGDCYFFLGKF 487

Query: 285 FLVEQLTETALAVT--------NHG-----------------------PTKSHSYYNLAR 313
                  + A+ +         N G                       P    SY N+  
Sbjct: 488 LEAISCYDQAIQINEIFQDPFFNKGNAFYYLQNFSEAIKCYQKVIEINPQDFKSYNNIGN 547

Query: 314 SYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYP 373
           S+ +   Y+ A   Y  ++  INK +  I   +  G + +++  F+ A+  ++++LEI  
Sbjct: 548 SFQNLKKYKDAAFNYEKAL-SINKFY--IEGLFNKGSLLIEIRSFQEAINCYDQILEISN 604

Query: 374 DNCETLKALGHI---YVQLGQ--IEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGA 427
            N  +L   G+I   Y+Q  Q  I+  +E+++K    +    Q FI++ + LI       
Sbjct: 605 FNVASLYNKGNILFFYLQNYQESIKCYEEIIQKR---NSYLLQTFINVSKALIEIQQYEK 661

Query: 428 ALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDA-----------LG 476
           A+  F  A  +     ++  IE   N G+      +FE A Q F++            L 
Sbjct: 662 AISYFDQALKI-----DQYNIEAQFNKGICLNLIKKFEKASQCFQNIINMEPNNQKAYLN 716

Query: 477 DGIWLTLLDSKTKTYVIDASASMLQFKDMQ-LFHR--------------------FENDG 515
            GI L  L    ++      A +L   D Q +F +                     + D 
Sbjct: 717 QGICLKNLFQYQQSLECLNKAILLNENDFQAIFIKAKVLNEIKQYQEAIEYYKRALKLDC 776

Query: 516 NHVELPWNKVTVLFNLARLLE---------QIHDTVAASVLYRLILF----KYQ------ 556
            + E+ ++     +NL +  E         Q + +   +  YR + F    KY       
Sbjct: 777 KNYEVFYSLGISFYNLEQFQEAINYFDETIQFNQSFLEAYFYRGVAFFNIQKYDEAIDSF 836

Query: 557 --------DYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDL 602
                   DY++AY+      K     + S+    EAL  N +Y  A    G++
Sbjct: 837 QKVIEINPDYLEAYIYKGNSFKKLQKYECSLLCYEEALSKNPEYEIAYFNKGNI 890



 Score = 39.7 bits (91), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 95/486 (19%), Positives = 186/486 (38%), Gaps = 25/486 (5%)

Query: 117  YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACV-EFNR 175
            Y KA  I+         KG LL+     ++A + +  +LE    NV +L  +  +  F  
Sbjct: 562  YEKALSINKFYIEGLFNKGSLLIEIRSFQEAINCYDQILEISNFNVASLYNKGNILFFYL 621

Query: 176  GRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV 235
              Y +S++ Y+  +Q   S      + +     ++ Q  KA   F +AL++D  N+EA  
Sbjct: 622  QNYQESIKCYEEIIQKRNSYLLQTFINVSKALIEIQQYEKAISYFDQALKIDQYNIEAQF 681

Query: 236  ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETAL 295
               +     N      K  +  Q    + P    A  YL N        F  +Q  E   
Sbjct: 682  NKGIC---LNLIKKFEKASQCFQNIINMEPNNQKA--YL-NQGICLKNLFQYQQSLECLN 735

Query: 296  AVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKL 355
                       + +  A+  +    Y++A  YY  ++K   K +E    +Y LG     L
Sbjct: 736  KAILLNENDFQAIFIKAKVLNEIKQYQEAIEYYKRALKLDCKNYE---VFYSLGISFYNL 792

Query: 356  GDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFID 415
              F+ A+  F++ ++      E     G  +  + + ++A +  +K  +I+P   +A+I 
Sbjct: 793  EQFQEAINYFDETIQFNQSFLEAYFYRGVAFFNIQKYDEAIDSFQKVIEINPDYLEAYIY 852

Query: 416  LGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
             G      ++   L  ++ +    ++A  + P        + +F KG      Q +++++
Sbjct: 853  KG------NSFKKLQKYECSLLCYEEALSKNP-----EYEIAYFNKGNILIHLQQYQESI 901

Query: 476  GDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHR-FENDGNHVELPWNKVTVLFNLARL 534
                    + SK   +        +  K+ + F    E+    +E+         N    
Sbjct: 902  ---FCFEQILSKNIKHAEAHYQKGIALKEQKKFKEAIESFEKAIEINEKYYQAYNNQGIA 958

Query: 535  LEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPN 594
            L +I +   A   Y   +   ++Y +AY     I    N    +I+   +A+K+N ++  
Sbjct: 959  LTEIQEYQKAMKCYEKAIKINKNYAEAYNNKGIILFFLNEFTDAIKCYQKAIKINSEFSE 1018

Query: 595  ALSMLG 600
            A S +G
Sbjct: 1019 AYSNIG 1024


>gi|326432879|gb|EGD78449.1| tetratricopeptide TPR_2 [Salpingoeca sp. ATCC 50818]
          Length = 920

 Score = 69.3 bits (168), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 99/455 (21%), Positives = 184/455 (40%), Gaps = 72/455 (15%)

Query: 88  ALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDM--------HEPSTWVGKGQLLL 139
           +  + Y+ LG++   + + +     A  YY K  +I +        H  +T+   G +  
Sbjct: 376 STAITYSSLGQVYCNKGDYDR----AIHYYEKCLQIQLDTLEEKHPHTATTYNNLGHVYC 431

Query: 140 AKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNR--------GRYSDSLEFYKRALQV 191
           +K + ++A   +   L+   D +     +    +N         G Y  +LE+ +++LQ+
Sbjct: 432 SKCDYDRAIHYYDKCLQIQLDTLGEKHAETARTYNNLGGVHCSMGEYDRALEYCQQSLQI 491

Query: 192 --------HPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENV---EALVALAVM 240
                   HPS    I   +G   Y  G   +A   +++ LQ+  + +       A    
Sbjct: 492 YLDTWGEKHPST-ATIHNNLGQVYYSKGDYDRAIHYYEKCLQIQLDTLGEKHPHTAGTYN 550

Query: 241 DL-QANEAAG-IRKGMEKMQRAFEI--------YPYCAMALNYLANHFFFTGQ-----HF 285
           +L Q  E+ G   + +   ++  +I        +P  A     L   +   G      H+
Sbjct: 551 NLGQVYESKGDYDRALAYFEKCLQIQLDTLGEKHPSTATTCGNLGQVYRSKGDYDRAIHY 610

Query: 286 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK----EINKPH-E 340
             + L      +    P  + +Y NL + Y SKGDY+ A  YY  S++     + + H +
Sbjct: 611 YEKCLQIQLDTLGEKHPHTATTYGNLGQVYKSKGDYDLATHYYQKSLQIKLDTLGEKHPD 670

Query: 341 FIFPYYGLGQVQLKLGDFRSALTNFEKVLEI--------YPDNCETLKALGHIYVQLGQI 392
               Y  LGQV    G++  A+  +EK L+I        +PD   T   LG +Y   G+ 
Sbjct: 671 TATTYNNLGQVYNSKGEYDRAIHYYEKSLQIKLDTLGEKHPDTATTYNNLGQVYRSKGEY 730

Query: 393 EKAQELLRKAAKID--------PRDAQAFIDLGELLIS-SDTGAALDAF-KTARTLLKKA 442
           ++A E  +K   I         P  A  + +LG +  S  +   A+  + K+ +  L   
Sbjct: 731 DRALEYYQKDLNITLDTLGEKHPSTATTYGNLGGVYNSKGEYDRAIHYYQKSLQIRLDTL 790

Query: 443 GEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDAL 475
           GE+ P      NN+G +++ K ++  A Q  + A+
Sbjct: 791 GEKHPDTATTYNNLGGVYYSKCDYARAKQLMQRAV 825



 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 83/359 (23%), Positives = 140/359 (38%), Gaps = 58/359 (16%)

Query: 171 VEFNRGRYSDSLEFYKRALQV--------HPSCPGAIRL-GIGLCRYKLGQLGKARQAFQ 221
           V ++ G Y  +LE+Y++  ++        HPS   AI    +G      G   +A   ++
Sbjct: 345 VYYSMGEYDRALEYYQKGFKITLDTLGEKHPST--AITYSSLGQVYCNKGDYDRAIHYYE 402

Query: 222 RALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYC-------------- 267
           + LQ+  + +E            N    +        RA   Y  C              
Sbjct: 403 KCLQIQLDTLEEKHPHTATTY--NNLGHVYCSKCDYDRAIHYYDKCLQIQLDTLGEKHAE 460

Query: 268 -AMALNYLANHFFFTGQHFLVEQLTETALAV-----TNHGPTKSHSYYNLARSYHSKGDY 321
            A   N L       G++    +  + +L +         P+ +  + NL + Y+SKGDY
Sbjct: 461 TARTYNNLGGVHCSMGEYDRALEYCQQSLQIYLDTWGEKHPSTATIHNNLGQVYYSKGDY 520

Query: 322 EKAGLYYMASVK----EINKPHEFI-FPYYGLGQVQLKLGDFRSALTNFEKVLEI----- 371
           ++A  YY   ++     + + H      Y  LGQV    GD+  AL  FEK L+I     
Sbjct: 521 DRAIHYYEKCLQIQLDTLGEKHPHTAGTYNNLGQVYESKGDYDRALAYFEKCLQIQLDTL 580

Query: 372 ---YPDNCETLKALGHIYVQLGQIEKAQELLRKAAKID--------PRDAQAFIDLGELL 420
              +P    T   LG +Y   G  ++A     K  +I         P  A  + +LG++ 
Sbjct: 581 GEKHPSTATTCGNLGQVYRSKGDYDRAIHYYEKCLQIQLDTLGEKHPHTATTYGNLGQVY 640

Query: 421 IS-SDTGAALDAF-KTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDAL 475
            S  D   A   + K+ +  L   GE+ P      NN+G ++  KGE++ A   ++ +L
Sbjct: 641 KSKGDYDLATHYYQKSLQIKLDTLGEKHPDTATTYNNLGQVYNSKGEYDRAIHYYEKSL 699



 Score = 59.7 bits (143), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 75/336 (22%), Positives = 134/336 (39%), Gaps = 74/336 (22%)

Query: 113 ATQYYNKASRIDM--------HEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNV-- 162
           A  YY K  +I +        H   T+   GQ+  +KG+ ++A + F+  L+   D +  
Sbjct: 523 AIHYYEKCLQIQLDTLGEKHPHTAGTYNNLGQVYESKGDYDRALAYFEKCLQIQLDTLGE 582

Query: 163 --PAL------LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLG 214
             P+       LGQ  V  ++G Y  ++ +Y++ LQ+     G            LGQ+ 
Sbjct: 583 KHPSTATTCGNLGQ--VYRSKGDYDRAIHYYEKCLQIQLDTLGEKHPHTATTYGNLGQVY 640

Query: 215 KAR-------QAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYC 267
           K++         +Q++LQ+                             K+    E +P  
Sbjct: 641 KSKGDYDLATHYYQKSLQI-----------------------------KLDTLGEKHPDT 671

Query: 268 AMALNYLANHFFFTGQ-----HFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYE 322
           A   N L   +   G+     H+  + L      +    P  + +Y NL + Y SKG+Y+
Sbjct: 672 ATTYNNLGQVYNSKGEYDRAIHYYEKSLQIKLDTLGEKHPDTATTYNNLGQVYRSKGEYD 731

Query: 323 KAGLYYMA----SVKEINKPHEFIFPYYG-LGQVQLKLGDFRSALTNFEKVLEI------ 371
           +A  YY      ++  + + H      YG LG V    G++  A+  ++K L+I      
Sbjct: 732 RALEYYQKDLNITLDTLGEKHPSTATTYGNLGGVYNSKGEYDRAIHYYQKSLQIRLDTLG 791

Query: 372 --YPDNCETLKALGHIYVQLGQIEKAQELLRKAAKI 405
             +PD   T   LG +Y       +A++L+++A  I
Sbjct: 792 EKHPDTATTYNNLGGVYYSKCDYARAKQLMQRAVDI 827



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 56/224 (25%), Positives = 97/224 (43%), Gaps = 30/224 (13%)

Query: 282 GQHFLVEQLTETALAV-----TNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK--- 333
           G+H   EQ  +  L +         P+ + +Y NL   Y+S G+Y++A  YY    K   
Sbjct: 308 GEHERAEQFLQRGLDIELNTLGEKHPSTATTYGNLGGVYYSMGEYDRALEYYQKGFKITL 367

Query: 334 -EINKPHEFI-FPYYGLGQVQLKLGDFRSALTNFEKVLEI--------YPDNCETLKALG 383
             + + H      Y  LGQV    GD+  A+  +EK L+I        +P    T   LG
Sbjct: 368 DTLGEKHPSTAITYSSLGQVYCNKGDYDRAIHYYEKCLQIQLDTLEEKHPHTATTYNNLG 427

Query: 384 HIYVQLGQIEKAQELLRKAAKID--------PRDAQAFIDLGELLIS-SDTGAALD-AFK 433
           H+Y      ++A     K  +I            A+ + +LG +  S  +   AL+   +
Sbjct: 428 HVYCSKCDYDRAIHYYDKCLQIQLDTLGEKHAETARTYNNLGGVHCSMGEYDRALEYCQQ 487

Query: 434 TARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDAL 475
           + +  L   GE+ P    + NN+G +++ KG+++ A   ++  L
Sbjct: 488 SLQIYLDTWGEKHPSTATIHNNLGQVYYSKGDYDRAIHYYEKCL 531


>gi|294508725|ref|YP_003572784.1| hypothetical protein SRM_02912 [Salinibacter ruber M8]
 gi|294345055|emb|CBH25833.1| Conserved hypothetical protein containing TPR domain [Salinibacter
           ruber M8]
          Length = 554

 Score = 69.3 bits (168), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 81/324 (25%), Positives = 141/324 (43%), Gaps = 25/324 (7%)

Query: 126 HEPSTWVGKGQL------LLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYS 179
           ++PS +   G L         +GE+E A      ++E       A + +  +  N GR  
Sbjct: 114 NDPSAYFDSGDLEEIASFYFEEGEMETALEVIDRLIELHPYTSDAWMRRGILLNNLGRPE 173

Query: 180 DSLEFYKRALQVHPS-CPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA 238
           ++LE Y++AL V+P+     I LGI L    LG++ +A +A+  AL ++P + EAL  L 
Sbjct: 174 EALEAYEQALDVNPTDTETLINLGITLD--SLGRVDEALEAYDEALSINPLHGEALFNLG 231

Query: 239 VMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVT 298
           V  L+ +E   +   +E  QR  ++YP        L   +   G+        ++  A  
Sbjct: 232 VT-LERDEQ--LEAAVEAFQRCADVYPEHPEVWYELGYCYDRLGED------EKSVEAYD 282

Query: 299 NH---GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKL 355
           NH    P    ++YN     +  G + +A   Y  ++   +   EF   YY  G  +   
Sbjct: 283 NHLDIDPYSKDAWYNRGIVLNRLGRFGEAVESYDMALAIHD---EFASAYYNRGNAEANQ 339

Query: 356 GDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFID 415
           GD  +A+ ++E+VLE+   +  T   L   Y + G +  A+    K   +     +A+  
Sbjct: 340 GDLEAAVESYERVLELEGPDAATYYNLALAYEEQGDLRAARTYYEKTLDLKSNYPEAWYG 399

Query: 416 LGELLISSD-TGAALDAFKTARTL 438
           LG    + +    AL+ F+ A  L
Sbjct: 400 LGCCFDTDERPEEALECFRYAVNL 423



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 77/287 (26%), Positives = 123/287 (42%), Gaps = 14/287 (4%)

Query: 123 IDMHEPST---WVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYS 179
           I++H P T   W+ +G LL   G  E+A  A++  L+ +  +   L+       + GR  
Sbjct: 149 IELH-PYTSDAWMRRGILLNNLGRPEEALEAYEQALDVNPTDTETLINLGITLDSLGRVD 207

Query: 180 DSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAV 239
           ++LE Y  AL ++P   G     +G+   +  QL  A +AFQR   + PE+ E    L  
Sbjct: 208 EALEAYDEALSINP-LHGEALFNLGVTLERDEQLEAAVEAFQRCADVYPEHPEVWYELGY 266

Query: 240 MDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTN 299
              +  E     K +E      +I PY   A           G+     +  + ALA+ +
Sbjct: 267 CYDRLGED---EKSVEAYDNHLDIDPYSKDAWYNRGIVLNRLGRFGEAVESYDMALAIHD 323

Query: 300 HGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFR 359
                + +YYN   +  ++GD E A   Y   V E+  P      YY L     + GD R
Sbjct: 324 E---FASAYYNRGNAEANQGDLEAAVESY-ERVLELEGPDAAT--YYNLALAYEEQGDLR 377

Query: 360 SALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKID 406
           +A T +EK L++  +  E    LG  +    + E+A E  R A  +D
Sbjct: 378 AARTYYEKTLDLKSNYPEAWYGLGCCFDTDERPEEALECFRYAVNLD 424



 Score = 46.6 bits (109), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 58/235 (24%), Positives = 103/235 (43%), Gaps = 20/235 (8%)

Query: 246 EAAGIRKGMEKMQRAFEIYPYCA---MALNYLANHFFFTGQHFLVEQLTETALAVTNHGP 302
           E   +   +E + R  E++PY +   M    L N+    G+     +  E AL V    P
Sbjct: 134 EEGEMETALEVIDRLIELHPYTSDAWMRRGILLNNL---GRPEEALEAYEQALDVN---P 187

Query: 303 TKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPH-EFIFPYYGLGQVQLKLGDFRSA 361
           T + +  NL  +  S G  ++A   Y  ++  IN  H E +F    LG    +     +A
Sbjct: 188 TDTETLINLGITLDSLGRVDEALEAYDEALS-INPLHGEALF---NLGVTLERDEQLEAA 243

Query: 362 LTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLI 421
           +  F++  ++YP++ E    LG+ Y +LG+ EK+ E       IDP    A+ + G +L 
Sbjct: 244 VEAFQRCADVYPEHPEVWYELGYCYDRLGEDEKSVEAYDNHLDIDPYSKDAWYNRGIVLN 303

Query: 422 S-SDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
                G A++++  A  +  +           N G     +G+ E+A +S++  L
Sbjct: 304 RLGRFGEAVESYDMALAIHDEFA-----SAYYNRGNAEANQGDLEAAVESYERVL 353



 Score = 45.8 bits (107), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 81/352 (23%), Positives = 137/352 (38%), Gaps = 47/352 (13%)

Query: 307 SYYNLARSYHSKGDYEKAGLYY-----MASVKEINKPHEFIFPYYG-----LGQVQLKLG 356
           +Y N   +Y   GD E+   +Y     M +  E+      + PY        G +   LG
Sbjct: 111 AYENDPSAYFDSGDLEEIASFYFEEGEMETALEVIDRLIELHPYTSDAWMRRGILLNNLG 170

Query: 357 DFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDL 416
               AL  +E+ L++ P + ETL  LG     LG++++A E   +A  I+P   +A  +L
Sbjct: 171 RPEEALEAYEQALDVNPTDTETLINLGITLDSLGRVDEALEAYDEALSINPLHGEALFNL 230

Query: 417 GELLISSDT-GAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSF---- 471
           G  L   +   AA++AF+    +      E P EV   +G  +   GE E + +++    
Sbjct: 231 GVTLERDEQLEAAVEAFQRCADVYP----EHP-EVWYELGYCYDRLGEDEKSVEAYDNHL 285

Query: 472 ------KDALGD-GIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNH------- 517
                 KDA  + GI L  L    +   +++    L   D +    + N GN        
Sbjct: 286 DIDPYSKDAWYNRGIVLNRLGRFGE--AVESYDMALAIHD-EFASAYYNRGNAEANQGDL 342

Query: 518 ----------VELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAA 567
                     +EL        +NLA   E+  D  AA   Y   L    +Y +A+  L  
Sbjct: 343 EAAVESYERVLELEGPDAATYYNLALAYEEQGDLRAARTYYEKTLDLKSNYPEAWYGLGC 402

Query: 568 IAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAA 619
                   + ++E    A+ ++   P   +   D   K     +A E+++ A
Sbjct: 403 CFDTDERPEEALECFRYAVNLDANVPKFWTARADCAYKVGKLDEALESYQHA 454



 Score = 45.8 bits (107), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 48/219 (21%), Positives = 89/219 (40%), Gaps = 28/219 (12%)

Query: 70  EIDEYYADVRYERIAILNALGVY--------------------YTYLGKIETKQREKEEH 109
           +ID Y  D  Y R  +LN LG +                    Y   G  E  Q + E  
Sbjct: 286 DIDPYSKDAWYNRGIVLNRLGRFGEAVESYDMALAIHDEFASAYYNRGNAEANQGDLE-- 343

Query: 110 FILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQA 169
              A + Y +   ++  + +T+         +G++  A + ++  L+   +   A  G  
Sbjct: 344 --AAVESYERVLELEGPDAATYYNLALAYEEQGDLRAARTYYEKTLDLKSNYPEAWYGLG 401

Query: 170 CVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPE 229
           C      R  ++LE ++ A+ +  + P         C YK+G+L +A +++Q A++LD  
Sbjct: 402 CCFDTDERPEEALECFRYAVNLDANVP-KFWTARADCAYKVGKLDEALESYQHAVRLDES 460

Query: 230 NVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCA 268
           N  A    A   L+  +     + +E  ++A E+ P  A
Sbjct: 461 NEHAWTGYAETLLEKEQP---EEALEAYRQALELDPKSA 496



 Score = 41.6 bits (96), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 63/313 (20%), Positives = 121/313 (38%), Gaps = 18/313 (5%)

Query: 105 EKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPA 164
           E++E    A + + + + +    P  W   G      GE E++  A+   L+ D  +  A
Sbjct: 235 ERDEQLEAAVEAFQRCADVYPEHPEVWYELGYCYDRLGEDEKSVEAYDNHLDIDPYSKDA 294

Query: 165 LLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRAL 224
              +  V    GR+ +++E Y  AL +H     A     G      G L  A ++++R L
Sbjct: 295 WYNRGIVLNRLGRFGEAVESYDMALAIHDEFASAY-YNRGNAEANQGDLEAAVESYERVL 353

Query: 225 QLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQH 284
           +L+  +      LA+   +  +    R   EK       YP            ++  G  
Sbjct: 354 ELEGPDAATYYNLALAYEEQGDLRAARTYYEKTLDLKSNYP----------EAWYGLGCC 403

Query: 285 FLVEQLTETALAV----TNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHE 340
           F  ++  E AL       N        +   A   +  G  ++A   Y  +V+ +++ +E
Sbjct: 404 FDTDERPEEALECFRYAVNLDANVPKFWTARADCAYKVGKLDEALESYQHAVR-LDESNE 462

Query: 341 FIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLR 400
               + G  +  L+      AL  + + LE+ P +  T        + LG+ +++   L+
Sbjct: 463 HA--WTGYAETLLEKEQPEEALEAYRQALELDPKSANTYFRQAKALLALGRADESIRALK 520

Query: 401 KAAKIDPRDAQAF 413
            A ++DP   + F
Sbjct: 521 TAFRLDPAKKEEF 533


>gi|334118034|ref|ZP_08492124.1| Tetratricopeptide TPR_2 repeat-containing protein [Microcoleus
           vaginatus FGP-2]
 gi|333460019|gb|EGK88629.1| Tetratricopeptide TPR_2 repeat-containing protein [Microcoleus
           vaginatus FGP-2]
          Length = 772

 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 80/295 (27%), Positives = 131/295 (44%), Gaps = 31/295 (10%)

Query: 135 GQLLLAKGEVEQASSAFK--IVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVH 192
           G+ L A+G++E A   +K  I L+ D     A LG  C    +  + +++  Y++A+ + 
Sbjct: 48  GKALQAQGKLEDARYWYKVAIALQPDFAEAFANLGTLCATLEQ--WQEAIACYQKAISLQ 105

Query: 193 PSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDP-ENVEALVALAVMDLQAN--EAAG 249
           P+  G  R  +     ++GQ  +A     +AL ++P E  E  + L    L  N  EAA 
Sbjct: 106 PNFAGFYR-NLSRIFTQVGQAEEAADCSYQALMVEPIEIAEEYLDLGNTLLAQNKPEAAL 164

Query: 250 IRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH------GPT 303
           I        R   + P C  A   LA             QL     A+ N+       P 
Sbjct: 165 I-----CYHRTIYLNPSCCEAYYQLAA---------TASQLQHWDEAIVNYRKAIQLQPD 210

Query: 304 KSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALT 363
            S  YY LA+ +   G   +A   Y  S+ E+N P+ F + YY LG V LKL  ++ A+ 
Sbjct: 211 ISELYYKLAKVFQDSGQLPEAVAAYRESI-ELN-PNSF-WSYYNLGSVLLKLEQWQEAVV 267

Query: 364 NFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGE 418
            +   +EI PD      ++G    +L +  +A    ++A  +DP  + +F +LG+
Sbjct: 268 AYRTAVEINPDFSWCYYSMGEACGKLEKWSEAAAAYQRAIDLDPNYSGSFHNLGD 322



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 61/299 (20%), Positives = 130/299 (43%), Gaps = 36/299 (12%)

Query: 135 GQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS 194
           G  LLA+ + E A   +   +  +     A    A        + +++  Y++A+Q+ P 
Sbjct: 151 GNTLLAQNKPEAALICYHRTIYLNPSCCEAYYQLAATASQLQHWDEAIVNYRKAIQLQPD 210

Query: 195 CPGAIRLGIGLCRYKL-------GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEA 247
                   I    YKL       GQL +A  A++ +++L+P +  +   L  + L+  + 
Sbjct: 211 --------ISELYYKLAKVFQDSGQLPEAVAAYRESIELNPNSFWSYYNLGSVLLKLEQ- 261

Query: 248 AGIRKGMEKMQRAFEIYP---YCAMALNYLANHFFFTGQHFLVEQLTETALA---VTNHG 301
              ++ +   + A EI P   +C  ++               +E+ +E A A     +  
Sbjct: 262 --WQEAVVAYRTAVEINPDFSWCYYSMGEACGK---------LEKWSEAAAAYQRAIDLD 310

Query: 302 PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSA 361
           P  S S++NL  ++     + +A   Y    + I    EF + +Y L   ++KL D   A
Sbjct: 311 PNYSGSFHNLGDAFFQLQKWSEAEAAYQ---RAIALHSEFFWSHYNLALTKVKLQDLLGA 367

Query: 362 LTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 420
           ++ +++ +E+ P+   +   LG   ++  Q + A    ++A +++P  + ++ +LG+ L
Sbjct: 368 ISAYQRAIELNPNFSWSYHNLGEALLKTQQWKAASIAYKRAIELNPNLSWSYYNLGDAL 426



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 101/506 (19%), Positives = 193/506 (38%), Gaps = 87/506 (17%)

Query: 168 QACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLD 227
           QA V    G+  +++   ++ L  HP+     +  +G      G+L  AR  ++ A+ L 
Sbjct: 13  QAEVYLALGKLDEAIALCQQVLASHPNSAKTCK-TLGKALQAQGKLEDARYWYKVAIALQ 71

Query: 228 PENVEALVALAVMDLQANEAAGIRKGMEKM---QRAFEIYPYCAMALNYLANHFFFTGQH 284
           P+  EA   L  +       A + +  E +   Q+A  + P  A     L+  F   GQ 
Sbjct: 72  PDFAEAFANLGTL------CATLEQWQEAIACYQKAISLQPNFAGFYRNLSRIFTQVGQA 125

Query: 285 FLVEQLTETALAVTNHGPTK-SHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIF 343
                 +  AL V    P + +  Y +L  +  ++   E A + Y  ++        ++ 
Sbjct: 126 EEAADCSYQALMVE---PIEIAEEYLDLGNTLLAQNKPEAALICYHRTI--------YLN 174

Query: 344 P-----YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQEL 398
           P     YY L     +L  +  A+ N+ K +++ PD  E    L  ++   GQ+ +A   
Sbjct: 175 PSCCEAYYQLAATASQLQHWDEAIVNYRKAIQLQPDISELYYKLAKVFQDSGQLPEAVAA 234

Query: 399 LRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIH 458
            R++ +++P    ++ +LG +L+       L+ ++ A    + A E  P           
Sbjct: 235 YRESIELNPNSFWSYYNLGSVLLK------LEQWQEAVVAYRTAVEINP----------- 277

Query: 459 FEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHV 518
               +F   + S  +A G          K + +   A+A          + R       +
Sbjct: 278 ----DFSWCYYSMGEACG----------KLEKWSEAAAA----------YQR------AI 307

Query: 519 ELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLS 578
           +L  N      NL     Q+     A   Y+  +  + ++  ++  LA       +L  +
Sbjct: 308 DLDPNYSGSFHNLGDAFFQLQKWSEAEAAYQRAIALHSEFFWSHYNLALTKVKLQDLLGA 367

Query: 579 IELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGN-- 636
           I     A+++N  +  +   LG+  LK   W  A   ++ A +  +   S++  +LG+  
Sbjct: 368 ISAYQRAIELNPNFSWSYHNLGEALLKTQQWKAASIAYKRAIE-LNPNLSWSYYNLGDAL 426

Query: 637 -----WN-----YFAALRNEKRAPKL 652
                WN     Y  AL  E   PK+
Sbjct: 427 TEMHEWNDAVSAYLCALEIEPELPKI 452



 Score = 44.3 bits (103), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 55/252 (21%), Positives = 117/252 (46%), Gaps = 18/252 (7%)

Query: 174 NRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEA 233
           + G+  +++  Y+ +++++P+   +    +G    KL Q  +A  A++ A++++P+    
Sbjct: 224 DSGQLPEAVAAYRESIELNPNSFWSY-YNLGSVLLKLEQWQEAVVAYRTAVEINPDFSWC 282

Query: 234 LVALAVMDLQANEAAG-IRKGMEKM---QRAFEIYPYCAMALNYLANHFFFTGQHFLVEQ 289
             ++        EA G + K  E     QRA ++ P  + + + L + FF   +    E 
Sbjct: 283 YYSMG-------EACGKLEKWSEAAAAYQRAIDLDPNYSGSFHNLGDAFFQLQKWSEAEA 335

Query: 290 LTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLG 349
             + A+A+ +       S+YNLA +     D   A   Y  ++ E+N    F + Y+ LG
Sbjct: 336 AYQRAIALHSEF---FWSHYNLALTKVKLQDLLGAISAYQRAI-ELNP--NFSWSYHNLG 389

Query: 350 QVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRD 409
           +  LK   +++A   +++ +E+ P+   +   LG    ++ +   A      A +I+P  
Sbjct: 390 EALLKTQQWKAASIAYKRAIELNPNLSWSYYNLGDALTEMHEWNDAVSAYLCALEIEPEL 449

Query: 410 AQAFIDLGELLI 421
            + +  LG+ LI
Sbjct: 450 PKIYTKLGDALI 461


>gi|406935176|gb|EKD69225.1| hypothetical protein ACD_47C00214G0001, partial [uncultured
           bacterium]
          Length = 1290

 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 94/392 (23%), Positives = 160/392 (40%), Gaps = 78/392 (19%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
           AT  + KA  +    P   +  G+ L+    + +A S F  +L ++  NV ALL  A ++
Sbjct: 449 ATTLFMKALELSPDMPEITLEIGECLMNARRLPEAVSYFLKLLSSEPKNVRALLNLARIK 508

Query: 173 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 232
              G  +++  FY+R  +V  +   A RLG+    Y  GQL KA   +Q AL++ P++++
Sbjct: 509 ETLGETNNAFSFYERLYEVDENNVDA-RLGMAKILYSRGQLDKAMFLYQGALKMRPDSLD 567

Query: 233 ALVALAVMDLQAN---EAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQ 289
            L AL+ + ++     EA G+   + K +                               
Sbjct: 568 ILNALSEIYMKLKHEPEALGVFHEILKSE------------------------------- 596

Query: 290 LTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYM--------ASV-KEINKPHE 340
                       P  + +  NLA+ Y S+  Y +A  YY+        ASV KE+ +   
Sbjct: 597 ------------PKNTGAMLNLAKLYRSRAQYGEALKYYLELGFDYEAASVYKELGETAN 644

Query: 341 FIFPYYG---------------LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 385
            I  YY                 G++ LK   +  AL +   V+E+ PD+       G +
Sbjct: 645 AI-TYYDRAVKADPSNASARVEAGELYLKQKKYAEALKHLNVVIEMKPDSFHAHYLSGLV 703

Query: 386 YVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEE 445
             + G  E+A+    +  KID   + +F  L E   + +  A   A       LK     
Sbjct: 704 NFEQGLYERARGEFEQCVKIDGTSSDSFFYLAESHYNVENYAQAKA-----NYLKSQSLS 758

Query: 446 VPIEVLNN-IGVIHFEKGEFESAHQSFKDALG 476
             I +++N +G I+F++  FE+A   FK  + 
Sbjct: 759 SDILLIHNRLGYINFKEHNFEAAESEFKKVIA 790



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 82/350 (23%), Positives = 145/350 (41%), Gaps = 20/350 (5%)

Query: 130 TWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRAL 189
           +++G   +L  +G V +A    K  LE + D V  ++    V +    Y  +LE Y++A 
Sbjct: 56  SYLGMALILKQQGAVSEAILMMKKALEIEPDFVECIMHLGAVYYELEDYKRALECYQKAP 115

Query: 190 QVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPE--NVEALVALAVMDLQANEA 247
            +  +   A+ L  G C + L Q  +A + F   + ++ E  ++   V L+ + L  N A
Sbjct: 116 AIDATEIDAV-LKCGFCHFMLKQYVEAEEKFSYIVSINDEKYSLTCFVQLSEIALIKNNA 174

Query: 248 AGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHS 307
                 +EK   A  + P     +  LA+ +F   +        +T L ++   P    +
Sbjct: 175 EAAAGYLEK---ACALAPSDGDIVKKLADAYFRLDRSSEAIDRYKTLLTIS---PKLKEA 228

Query: 308 YYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEK 367
              L   Y    +Y  A  Y      E  +  E I     L + + +L  F  A+T++++
Sbjct: 229 ELKLGILYARVSNYNDAMFYLSRVADEYAESLELI---SSLAKCEFELRRFDDAMTHYKR 285

Query: 368 VLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGA 427
           +L   PD+ E L  +  I       E+AQ  L K  KI P D +A+      L++ +   
Sbjct: 286 LLTYSPDDLEALYKVAEIDYGRKNYEEAQTALNKYIKIKPGDFKAY------LLNGNCAK 339

Query: 428 ALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDAL 475
            ++ F  A     K  +  P   EV   +G ++F+  + E A   F   L
Sbjct: 340 KMNNFDAAVDNYMKCRDIAPEYSEVNMALGGLYFDLHKEELALTCFNKVL 389



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 112/503 (22%), Positives = 194/503 (38%), Gaps = 49/503 (9%)

Query: 297 VTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLG 356
           +  + P    + Y +A   + + +YE+A       +K   KP +F   Y   G    K+ 
Sbjct: 286 LLTYSPDDLEALYKVAEIDYGRKNYEEAQTALNKYIK--IKPGDFK-AYLLNGNCAKKMN 342

Query: 357 DFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDL 416
           +F +A+ N+ K  +I P+  E   ALG +Y  L + E A     K  + +P +  A    
Sbjct: 343 NFDAAVDNYMKCRDIAPEYSEVNMALGGLYFDLHKEELALTCFNKVLEKEPFNVNANY-- 400

Query: 417 GELLISSDTGAALDAFKTARTLLKKAGEEVPI--EVLNNIGVIHFEKGEFESAHQSFKDA 474
               +S+ +  AL  F  A    KK  E  P   + L  +  +      +E A   F  A
Sbjct: 401 ----MSAQSMLALSNFAGAAAGFKKVIELQPANKDALIKLARLKKSNANYEEATTLFMKA 456

Query: 475 LGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVEL----PWNKVTVLFN 530
           L        L        ++    ++  + +      E     ++L    P N V  L N
Sbjct: 457 LE-------LSPDMPEITLEIGECLMNARRLP-----EAVSYFLKLLSSEPKN-VRALLN 503

Query: 531 LARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNG 590
           LAR+ E + +T  A   Y  +    ++ VDA L +A I  +R  L  ++ L   ALK+  
Sbjct: 504 LARIKETLGETNNAFSFYERLYEVDENNVDARLGMAKILYSRGQLDKAMFLYQGALKMRP 563

Query: 591 KYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGN-----------WNY 639
              + L+ L ++ +K     +A   F      ++ K++ A L+L               Y
Sbjct: 564 DSLDILNALSEIYMKLKHEPEALGVFHEILK-SEPKNTGAMLNLAKLYRSRAQYGEALKY 622

Query: 640 FAALRNEKRAPKL--EATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDL 697
           +  L  +  A  +  E      A   Y R +    SN  A   AG +  ++ ++  +   
Sbjct: 623 YLELGFDYEAASVYKELGETANAITYYDRAVKADPSNASARVEAGELYLKQKKYAEALKH 682

Query: 698 FTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLA 757
              V E    S         +N     F QG +  A   ++ C++     T +    YLA
Sbjct: 683 LNVVIEMKPDSFHAHYLSGLVN-----FEQGLYERARGEFEQCVK--IDGTSSDSFFYLA 735

Query: 758 RTHYEAEQWQDCKKSLLRAIHLA 780
            +HY  E +   K + L++  L+
Sbjct: 736 ESHYNVENYAQAKANYLKSQSLS 758



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 57/117 (48%), Gaps = 3/117 (2%)

Query: 301 GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRS 360
            P  S +Y+ + R+Y   G+  +A + +  +++E  K +     Y G+  +  + G    
Sbjct: 16  APKNSRAYFEMGRTYSDMGNGSEALVLFRNAIEENAKDYR---SYLGMALILKQQGAVSE 72

Query: 361 ALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 417
           A+   +K LEI PD  E +  LG +Y +L   ++A E  +KA  ID  +  A +  G
Sbjct: 73  AILMMKKALEIEPDFVECIMHLGAVYYELEDYKRALECYQKAPAIDATEIDAVLKCG 129



 Score = 48.9 bits (115), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 148/703 (21%), Positives = 274/703 (38%), Gaps = 112/703 (15%)

Query: 139 LAKGEVE-----QASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHP 193
           LAK E E      A + +K +L    D++ AL   A +++ R  Y ++     + +++ P
Sbjct: 266 LAKCEFELRRFDDAMTHYKRLLTYSPDDLEALYKVAEIDYGRKNYEEAQTALNKYIKIKP 325

Query: 194 SCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVM--DLQANEAAGIR 251
               A  L  G C  K+     A   + +   + PE  E  +AL  +  DL   E A   
Sbjct: 326 GDFKAYLLN-GNCAKKMNNFDAAVDNYMKCRDIAPEYSEVNMALGGLYFDLHKEELA--- 381

Query: 252 KGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNL 311
             +    +  E  P+   A NY++        +F           V    P    +   L
Sbjct: 382 --LTCFNKVLEKEPFNVNA-NYMSAQSMLALSNF--AGAAAGFKKVIELQPANKDALIKL 436

Query: 312 ARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEI 371
           AR   S  +YE+A   +M +++      E       +G+  +       A++ F K+L  
Sbjct: 437 ARLKKSNANYEEATTLFMKALELSPDMPEITLE---IGECLMNARRLPEAVSYFLKLLSS 493

Query: 372 YPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDA 431
            P N   L  L  I   LG+   A     +  ++D  +  A + + ++L S      LD 
Sbjct: 494 EPKNVRALLNLARIKETLGETNNAFSFYERLYEVDENNVDARLGMAKILYSR---GQLD- 549

Query: 432 FKTARTLLKKAGEEVP--IEVLNNIGVIHFE-KGEFESAHQSFKDALGDGIWLTLLDSKT 488
              A  L + A +  P  +++LN +  I+ + K E E+           G++  +L S+ 
Sbjct: 550 --KAMFLYQGALKMRPDSLDILNALSEIYMKLKHEPEAL----------GVFHEILKSEP 597

Query: 489 KTYVIDASASMLQFKDMQLFHRFENDGN----HVELPWNKVTVLFNLARLLEQIHDTVAA 544
           K      + +ML     +L+      G     ++EL ++     +  A + +++ +T  A
Sbjct: 598 KN-----TGAMLNL--AKLYRSRAQYGEALKYYLELGFD-----YEAASVYKELGETANA 645

Query: 545 SVLYRLILFKYQDYVDA-------YLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALS 597
              Y   +        A       YL+    A+A  +L + IE     +K +  + + LS
Sbjct: 646 ITYYDRAVKADPSNASARVEAGELYLKQKKYAEALKHLNVVIE-----MKPDSFHAHYLS 700

Query: 598 MLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHL 657
            L + E     + +A+  F       DG  S +   L   +Y     N +   + +A +L
Sbjct: 701 GLVNFE--QGLYERARGEFEQCVK-IDGTSSDSFFYLAESHY-----NVENYAQAKANYL 752

Query: 658 EKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVW 717
            K++ L + +++ H       N  G +  ++  F+ ++  F +V    +G++        
Sbjct: 753 -KSQSLSSDILLIH-------NRLGYINFKEHNFEAAESEFKKVIARDAGNIEANYHQAL 804

Query: 718 INLAHVYF---------------AQGNFA-LAMKMYQ------------NCLRKFYYNTD 749
           I +AH  +                   FA LA  +Y+            N L+K   NTD
Sbjct: 805 IEIAHAKYNDAIVRLKKISLNRNTSDTFAKLAEALYKSEHYEQALEEAANALKKDPNNTD 864

Query: 750 AQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGV 792
           A   L LA+   E ++++D + S +R   + P  Y  +F+ G+
Sbjct: 865 AHYYLGLAQK--ELKRYRDAEASFMRCCEINPKYYRAQFELGI 905



 Score = 41.6 bits (96), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 61/278 (21%), Positives = 106/278 (38%), Gaps = 49/278 (17%)

Query: 145  EQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIG 204
            E A S FK V+  D  N+ A   QA +E    +Y+D++   K+      +     +L   
Sbjct: 779  EAAESEFKKVIARDAGNIEANYHQALIEIAHAKYNDAIVRLKKISLNRNTSDTFAKLAEA 838

Query: 205  LCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIY 264
            L  YK     +A +    AL+ DP N +A   L    L   E    R       R  EI 
Sbjct: 839  L--YKSEHYEQALEEAANALKKDPNNTDAHYYLG---LAQKELKRYRDAEASFMRCCEIN 893

Query: 265  PYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 324
            P             ++  Q                         + L   Y+ +G   +A
Sbjct: 894  PK------------YYRAQ-------------------------FELGIIYNEEGKVLEA 916

Query: 325  GLYYMA---SVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKA 381
               + +   ++ E + P EF   YY   QV  ++GD    +  F + + + P     L  
Sbjct: 917  KTIFDSIEQNITEADMP-EF---YYNKAQVLTRVGDIEGGIKMFYQAIGLAPKFDRALWE 972

Query: 382  LGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGEL 419
            LG+  ++ G+ ++A +   +  ++D +++Q   +LG L
Sbjct: 973  LGYALIKAGRSDEAIKTFERLLELDNKNSQILYELGSL 1010


>gi|428218616|ref|YP_007103081.1| glycosyl transferase family protein [Pseudanabaena sp. PCC 7367]
 gi|427990398|gb|AFY70653.1| glycosyl transferase family 9 [Pseudanabaena sp. PCC 7367]
          Length = 2670

 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 84/346 (24%), Positives = 143/346 (41%), Gaps = 43/346 (12%)

Query: 98  KIETKQREKEEH-----FILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 152
            +ET+ ++ E H     F  A     K  + + H+P       + L A+G   +A   ++
Sbjct: 2   SVETRLQQAETHIAKQQFAQAIALCRKILKQNPHQPIACYLMARALQAQGRKLEAQQYYQ 61

Query: 153 IVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQ 212
             +E+D + V A L      F   R+  ++  Y+R +Q+ P    A    +GL   ++G+
Sbjct: 62  RAVESDANLVDAHLQLGNSLFMEARFGLAIASYERVIQLQPDHKEA-HYYLGLAYRQVGR 120

Query: 213 LGKARQAFQRALQLDPENVEALVAL------------------AVMDLQANEA------A 248
           L +A  +++RA+ ++P+ +E  VAL                  A ++L  N A       
Sbjct: 121 LTEAIASYERAIAINPDRIEIQVALGNAQLSAGQLDQAEQSYRAAIELNPNLAEAHNGLG 180

Query: 249 GIRKGMEKM-------QRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG 301
           G+    + +       +RA E+ P  A A   L    F   Q  L+E L     A+  H 
Sbjct: 181 GVMSNRDLLDQAASSYERAIELMPNYADAYANLGMTQFR--QKNLLEALANCQQAL-QHN 237

Query: 302 PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSA 361
           P  + +Y  L        + +  GL      K I     +   Y  LG  Q++ G+  +A
Sbjct: 238 PNHASTYMVLGL---IAAEQDNLGLAIAHYQKAIALNPNYANAYCNLGAAQMRQGEPETA 294

Query: 362 LTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 407
           + N+ K L I P+  E    LG  + QL Q   A E  ++A +  P
Sbjct: 295 IANYHKALAINPNLAEAYHNLGEAHSQLYQFTTATEFYQRAIQTKP 340



 Score = 50.1 bits (118), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 66/322 (20%), Positives = 128/322 (39%), Gaps = 62/322 (19%)

Query: 94  TYLGKIETKQREKEEHFILATQY------------YNKASRIDMHEPSTWVGKGQLLLAK 141
           +Y   I+ +   KE H+ L   Y            Y +A  I+       V  G   L+ 
Sbjct: 93  SYERVIQLQPDHKEAHYYLGLAYRQVGRLTEAIASYERAIAINPDRIEIQVALGNAQLSA 152

Query: 142 GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 201
           G+++QA  +++  +E + +   A  G   V  NR     +   Y+RA+++ P+   A   
Sbjct: 153 GQLDQAEQSYRAAIELNPNLAEAHNGLGGVMSNRDLLDQAASSYERAIELMPNYADAYA- 211

Query: 202 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 261
            +G+ +++   L +A    Q+ALQ +P +    + L ++   A E   +   +   Q+A 
Sbjct: 212 NLGMTQFRQKNLLEALANCQQALQHNPNHASTYMVLGLI---AAEQDNLGLAIAHYQKAI 268

Query: 262 EIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG----PTKSHSYYNLARSYHS 317
            + P      NY AN +   G   + +   ETA+A  +      P  + +Y+NL  ++  
Sbjct: 269 ALNP------NY-ANAYCNLGAAQMRQGEPETAIANYHKALAINPNLAEAYHNLGEAHSQ 321

Query: 318 KGDYEKAGLYYMASVKEINKPH---------------------------------EFIFP 344
              +  A  +Y  +++   KP+                                 +++  
Sbjct: 322 LYQFTTATEFYQRAIQ--TKPNYVSAHNALATVYLKQAQPDQAIAAYRQAIALQPDYVNA 379

Query: 345 YYGLGQVQLKLGDFRSALTNFE 366
           ++GL    L+LG+F   L  +E
Sbjct: 380 HFGLSMALLQLGNFTEGLVEYE 401



 Score = 49.3 bits (116), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 62/258 (24%), Positives = 113/258 (43%), Gaps = 17/258 (6%)

Query: 219  AFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHF 278
            A Q+ LQ  P+  +AL  L ++  Q  +     +GM  + RA  I P  A A   L N +
Sbjct: 1511 ACQQILQQHPDYFDALHLLGIIACQQKQ---FDRGMGYLHRAIAINPEYASAYFNLGNAY 1567

Query: 279  FFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKP 338
               G         + A+   +  P  + + + L ++  S    E A    +A  +E+ K 
Sbjct: 1568 REGGYLAAAAHYYQGAI---DRQPQNTDARHALGQTLQSLDRIEAA----IACYQELIKL 1620

Query: 339  HEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQEL 398
                  Y+ L  +Q + G    A+ N+E  +++ PD       LG++  Q GQ+E A   
Sbjct: 1621 QPSSLAYFYLADLQARQGLVNEAIGNYETAIQLQPDFAIAYNNLGNLLRQEGQLEPAIAN 1680

Query: 399  LRKAAKIDPRDAQAFIDLGELLISSDT-GAALDAFKTARTLLKKAGEEVPIEVLNNIGVI 457
            L KA ++    A+   ++G+ L  ++    AL  ++ A  +  +  +      L ++G I
Sbjct: 1681 LTKALELRRDLAEIHKNMGQALWQNNQLNEALSHYQQALAIKPEYDD------LLSLGSI 1734

Query: 458  HFEKGEFESAHQSFKDAL 475
               +G+F+ A   F+ A+
Sbjct: 1735 CRYRGDFDLAIAYFRQAI 1752



 Score = 48.5 bits (114), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 44/154 (28%), Positives = 76/154 (49%), Gaps = 10/154 (6%)

Query: 132  VGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQV 191
            V  GQ+    GE EQA   ++ VL  + ++  AL     +   +G+ + ++++Y+RA+ +
Sbjct: 1010 VALGQI----GEQEQAIEQYQRVLNQNPNHAQALNHLGVIHKQQGQLAQAIDYYERAIAI 1065

Query: 192  HPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMD-LQANEAAGI 250
             P    A+   +GL     G+   A +  QRA+ L+   V+A V + V+  LQ + AA I
Sbjct: 1066 QPDYVEAL-YHLGLALTAQGKWTAAIEQHQRAIALNHSFVQAYVCVGVLKRLQGDLAAAI 1124

Query: 251  RKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQH 284
                +  +RA E+ P  A A   L   F  +G +
Sbjct: 1125 ----DYQRRAIELKPNYAEAHQNLGIAFLLSGDY 1154



 Score = 46.6 bits (109), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 34/133 (25%), Positives = 66/133 (49%), Gaps = 8/133 (6%)

Query: 345 YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAK 404
           +Y LG    ++G    A+ ++E+ + I PD  E   ALG+  +  GQ+++A++  R A +
Sbjct: 108 HYYLGLAYRQVGRLTEAIASYERAIAINPDRIEIQVALGNAQLSAGQLDQAEQSYRAAIE 167

Query: 405 IDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKG 462
           ++P  A+A   LG ++ + D          A +  ++A E +P   +   N+G+  F + 
Sbjct: 168 LNPNLAEAHNGLGGVMSNRDL------LDQAASSYERAIELMPNYADAYANLGMTQFRQK 221

Query: 463 EFESAHQSFKDAL 475
               A  + + AL
Sbjct: 222 NLLEALANCQQAL 234



 Score = 45.8 bits (107), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 64/307 (20%), Positives = 123/307 (40%), Gaps = 20/307 (6%)

Query: 297 VTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLG 356
           +    P +  + Y +AR+  ++G   +A  YY  +V+        +  +  LG       
Sbjct: 29  ILKQNPHQPIACYLMARALQAQGRKLEAQQYYQRAVE---SDANLVDAHLQLGNSLFMEA 85

Query: 357 DFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDL 416
            F  A+ ++E+V+++ PD+ E    LG  Y Q+G++ +A     +A  I+P   +  + L
Sbjct: 86  RFGLAIASYERVIQLQPDHKEAHYYLGLAYRQVGRLTEAIASYERAIAINPDRIEIQVAL 145

Query: 417 GELLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDA 474
           G   +S+           A    + A E  P   E  N +G +   +   + A  S++ A
Sbjct: 146 GNAQLSAGQ------LDQAEQSYRAAIELNPNLAEAHNGLGGVMSNRDLLDQAASSYERA 199

Query: 475 LGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARL 534
                 + L+ +    Y   A+  M QF+   L     N    ++   N  +    L  +
Sbjct: 200 ------IELMPNYADAY---ANLGMTQFRQKNLLEALANCQQALQHNPNHASTYMVLGLI 250

Query: 535 LEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPN 594
             +  +   A   Y+  +    +Y +AY  L A    +   + +I   ++AL +N     
Sbjct: 251 AAEQDNLGLAIAHYQKAIALNPNYANAYCNLGAAQMRQGEPETAIANYHKALAINPNLAE 310

Query: 595 ALSMLGD 601
           A   LG+
Sbjct: 311 AYHNLGE 317



 Score = 39.7 bits (91), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 43/83 (51%)

Query: 335  INKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK 394
            +N+  E I   Y LG    ++G+   A+  +++VL   P++ + L  LG I+ Q GQ+ +
Sbjct: 995  LNQQPEHIEANYLLGVALGQIGEQEQAIEQYQRVLNQNPNHAQALNHLGVIHKQQGQLAQ 1054

Query: 395  AQELLRKAAKIDPRDAQAFIDLG 417
            A +   +A  I P   +A   LG
Sbjct: 1055 AIDYYERAIAIQPDYVEALYHLG 1077


>gi|356500631|ref|XP_003519135.1| PREDICTED: probable UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase SPINDLY-like [Glycine
           max]
 gi|401721241|gb|AFP99901.1| putative UDP-N-acetylglucosamin [Glycine max]
          Length = 928

 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 96/390 (24%), Positives = 166/390 (42%), Gaps = 58/390 (14%)

Query: 132 VGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQA-CVEF-NRGRYSDSLEFYKRAL 189
           V    +L ++ +   A + ++ VLE+D  NV AL+G+  C++  N GR   + E +  A+
Sbjct: 50  VSYANILRSRNKFVDALALYERVLESDGGNVEALIGKGICLQMQNMGRL--AFESFAEAI 107

Query: 190 QVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVM--DLQAN-- 245
           ++ P    A+    G+     G+L +A +++Q+ALQ+DP    A   LA++  D+  N  
Sbjct: 108 RLDPQNACALT-HCGILYKDEGRLVEAAESYQKALQVDPSYKAAAECLAIVLTDIGTNIK 166

Query: 246 EAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKS 305
            A   ++G++K   A +I P+ A A   L   +    Q+ +     E A    +  P  +
Sbjct: 167 LAGNTQEGIQKYFEALKIDPHYAPAYYNLGVVYSEMMQYDMALTFYEKA---ASERPMYA 223

Query: 306 HSYYNLARSYHSKGDYEKAGLYY-----MASVKEINK--------------------PHE 340
            +Y N+   Y ++GD E A   Y     ++   EI K                     H 
Sbjct: 224 EAYCNMGVIYKNRGDLEAAITCYERCLAVSPNFEIAKNNMAIALTDLGTKVKLEGDIDHG 283

Query: 341 FIF-------------PYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYV 387
             F               Y LG    ++  F  A+  +E      P   E    LG IY 
Sbjct: 284 VAFYKKALYYNWHYADAMYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYK 343

Query: 388 QLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP 447
               ++KA E  + A  I P  +Q+  +LG   +       +DA   A ++++KA    P
Sbjct: 344 DRDNLDKAVECYQLALGIKPNFSQSLNNLG---VVYTVQGKMDA---AASMIEKAIIANP 397

Query: 448 I--EVLNNIGVIHFEKGEFESAHQSFKDAL 475
              E  NN+GV++ + G+   A  +++  L
Sbjct: 398 TYAEAYNNLGVLYRDAGDIALAINAYEQCL 427



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 60/262 (22%), Positives = 107/262 (40%), Gaps = 33/262 (12%)

Query: 356 GDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK----AQELLRK---AAKIDPR 408
           G    A  +++K L++ P      + L  +   +G   K     QE ++K   A KIDP 
Sbjct: 128 GRLVEAAESYQKALQVDPSYKAAAECLAIVLTDIGTNIKLAGNTQEGIQKYFEALKIDPH 187

Query: 409 DAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPI--EVLNNIGVIHFEKGEFES 466
            A A+ +LG +       + +  +  A T  +KA  E P+  E   N+GVI+  +G+ E+
Sbjct: 188 YAPAYYNLGVVY------SEMMQYDMALTFYEKAASERPMYAEAYCNMGVIYKNRGDLEA 241

Query: 467 AHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNH--------V 518
           A   ++  L          + +  + I  +   +   D+    + E D +H        +
Sbjct: 242 AITCYERCL----------AVSPNFEIAKNNMAIALTDLGTKVKLEGDIDHGVAFYKKAL 291

Query: 519 ELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLS 578
              W+    ++NL     ++     A V Y L         +A   L  I K R+NL  +
Sbjct: 292 YYNWHYADAMYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKA 351

Query: 579 IELVNEALKVNGKYPNALSMLG 600
           +E    AL +   +  +L+ LG
Sbjct: 352 VECYQLALGIKPNFSQSLNNLG 373


>gi|428320555|ref|YP_007118437.1| Tetratricopeptide TPR_1 repeat-containing protein [Oscillatoria
           nigro-viridis PCC 7112]
 gi|428244235|gb|AFZ10021.1| Tetratricopeptide TPR_1 repeat-containing protein [Oscillatoria
           nigro-viridis PCC 7112]
          Length = 838

 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 74/305 (24%), Positives = 126/305 (41%), Gaps = 14/305 (4%)

Query: 111 ILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQAC 170
           I A   Y+KA  I   +   W  +G  L+  G +E+A +++   LE   D   A   +  
Sbjct: 499 IEAIASYDKALEIKPDDHEAWNNRGYALVNLGRIEEAIASWDKALEIKPDYHEAWYNRGV 558

Query: 171 VEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPEN 230
              N GR  D++  +  AL+  P    A     G+    LG+   A  ++  AL+  P+ 
Sbjct: 559 ALVNLGRREDAIASWDEALKFKPDLHEAW-YNRGVALVNLGRREDAIASWDEALKFKPDL 617

Query: 231 VEALV--ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVE 288
            EA     LA+++L   E A     +    +A ++ P    A   L       G+   +E
Sbjct: 618 HEAWYNRGLALVNLGRREDA-----IASYGKALKLKPDFHEAWYNLGVVLHDLGR---IE 669

Query: 289 QLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGL 348
               +        P    +++N     H+ G +E+A   +  ++K     HE    +Y  
Sbjct: 670 DAIASYDKALEIKPDYHEAWFNQGVVLHNLGRFEEAIASFGKALKFKADYHE---AWYSR 726

Query: 349 GQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPR 408
           G   + LG F  A+T++++ L+  PD  E     G +   LG+ E+A     KA K  P 
Sbjct: 727 GLALVNLGRFEEAITSWDEALKFKPDKHEAWYIRGLVLYNLGRFEEAIASYDKALKFKPD 786

Query: 409 DAQAF 413
             +A+
Sbjct: 787 KHEAW 791



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 83/331 (25%), Positives = 134/331 (40%), Gaps = 37/331 (11%)

Query: 87  NALGVYYTYLGKIETKQREKEEHFILATQYYNKASRI--DMHEPSTWVGKGQLLLAKGEV 144
           N  G     LG+IE            A   ++KA  I  D HE   W  +G  L+  G  
Sbjct: 520 NNRGYALVNLGRIEE-----------AIASWDKALEIKPDYHE--AWYNRGVALVNLGRR 566

Query: 145 EQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIG 204
           E A +++   L+   D   A   +     N GR  D++  +  AL+  P    A     G
Sbjct: 567 EDAIASWDEALKFKPDLHEAWYNRGVALVNLGRREDAIASWDEALKFKPDLHEAW-YNRG 625

Query: 205 LCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIY 264
           L    LG+   A  ++ +AL+L P+  EA   L V+    ++   I   +    +A EI 
Sbjct: 626 LALVNLGRREDAIASYGKALKLKPDFHEAWYNLGVV---LHDLGRIEDAIASYDKALEIK 682

Query: 265 PYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKS------HSYYNLARSYHSK 318
           P      +Y   H  +  Q  ++  L     A+ + G           ++Y+   +  + 
Sbjct: 683 P------DY---HEAWFNQGVVLHNLGRFEEAIASFGKALKFKADYHEAWYSRGLALVNL 733

Query: 319 GDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCET 378
           G +E+A   +  ++K     HE    +Y  G V   LG F  A+ +++K L+  PD  E 
Sbjct: 734 GRFEEAITSWDEALKFKPDKHE---AWYIRGLVLYNLGRFEEAIASYDKALKFKPDKHEA 790

Query: 379 LKALGHIYVQLGQIEKAQELLRKAAKIDPRD 409
               G     LG+I++A     KA +I P D
Sbjct: 791 WYIRGLALYNLGRIKEAIASYDKALEIKPDD 821



 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 96/373 (25%), Positives = 158/373 (42%), Gaps = 35/373 (9%)

Query: 113 ATQYYNKASRI--DMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQAC 170
           A   Y+KA  +  D HE   W  +G  L   G +E+A +++   LE   D   A   +  
Sbjct: 434 AIASYDKALELKPDYHE--AWNNRGNALRNLGRLEEAIASYDKALEIKPDYHEAWNNRVL 491

Query: 171 VEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPEN 230
           +  N GR  +++  Y +AL++ P    A     G     LG++ +A  ++ +AL++ P+ 
Sbjct: 492 LLDNLGRI-EAIASYDKALEIKPDDHEAWN-NRGYALVNLGRIEEAIASWDKALEIKPDY 549

Query: 231 VEALV--ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVE 288
            EA     +A+++L   E A     +     A +  P    A       ++  G   +  
Sbjct: 550 HEAWYNRGVALVNLGRREDA-----IASWDEALKFKPDLHEA-------WYNRGVALVNL 597

Query: 289 QLTETALAVTNHG----PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFP 344
              E A+A  +      P    ++YN   +  + G  E A   Y  ++K   KP +F   
Sbjct: 598 GRREDAIASWDEALKFKPDLHEAWYNRGLALVNLGRREDAIASYGKALKL--KP-DFHEA 654

Query: 345 YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAK 404
           +Y LG V   LG    A+ +++K LEI PD  E     G +   LG+ E+A     KA K
Sbjct: 655 WYNLGVVLHDLGRIEDAIASYDKALEIKPDYHEAWFNQGVVLHNLGRFEEAIASFGKALK 714

Query: 405 IDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPI--EVLNNIGVIHFEKG 462
                 +A+   G  L++      L  F+ A T   +A +  P   E     G++ +  G
Sbjct: 715 FKADYHEAWYSRGLALVN------LGRFEEAITSWDEALKFKPDKHEAWYIRGLVLYNLG 768

Query: 463 EFESAHQSFKDAL 475
            FE A  S+  AL
Sbjct: 769 RFEEAIASYDKAL 781



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 88/369 (23%), Positives = 153/369 (41%), Gaps = 27/369 (7%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
           A   Y+KA +    +   W  +G  L   G  E+A +++   L+   D   A   +    
Sbjct: 264 AIASYDKALKFKPDKHEVWNIRGLALDDLGRFEEAIASYDKALKFKPDLHEAWYIRGLAL 323

Query: 173 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 232
           +N GR  +++  + +AL++ P     +    G     LG+  +A  ++ +AL+L P+  E
Sbjct: 324 YNLGRREEAIASWDKALEIKPDLH-EVWYNRGYALDDLGRFEEALTSYNKALELKPDYHE 382

Query: 233 AL--VALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQL 290
           A     L + +L   E A     +    +A E+ P    A N   N     G+   +E+ 
Sbjct: 383 AWNNRGLLLHNLGRFEEA-----LTSYNKALELKPDYHEAWNNRGNALDKLGR---IEEA 434

Query: 291 TETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEF----IFPYY 346
             +        P    ++ N   +  + G  E+A   Y  +++     HE     +    
Sbjct: 435 IASYDKALELKPDYHEAWNNRGNALRNLGRLEEAIASYDKALEIKPDYHEAWNNRVLLLD 494

Query: 347 GLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKID 406
            LG+++        A+ +++K LEI PD+ E     G+  V LG+IE+A     KA +I 
Sbjct: 495 NLGRIE--------AIASYDKALEIKPDDHEAWNNRGYALVNLGRIEEAIASWDKALEIK 546

Query: 407 PRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFES 466
           P   +A+ + G  L+  + G   DA  +    LK   +    E   N GV     G  E 
Sbjct: 547 PDYHEAWYNRGVALV--NLGRREDAIASWDEALKFKPD--LHEAWYNRGVALVNLGRRED 602

Query: 467 AHQSFKDAL 475
           A  S+ +AL
Sbjct: 603 AIASWDEAL 611



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 95/377 (25%), Positives = 157/377 (41%), Gaps = 43/377 (11%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVL--EADRDNVPALLGQAC 170
           A   Y+KA +    +   W  +G  L+  G ++ A +++   L  + D+  V  + G A 
Sbjct: 230 AIASYDKALKFKPDKHEAWSSRGLALVKLGRLQDAIASYDKALKFKPDKHEVWNIRGLAL 289

Query: 171 VEFNRGRYSDSLEFYKRALQVHPSCPGA--IRLGIGLCRYKLGQLGKARQAFQRALQLDP 228
            +   GR+ +++  Y +AL+  P    A  IR   GL  Y LG+  +A  ++ +AL++ P
Sbjct: 290 DDL--GRFEEAIASYDKALKFKPDLHEAWYIR---GLALYNLGRREEAIASWDKALEIKP 344

Query: 229 ENVEALV--ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFL 286
           +  E       A+ DL   E A     +    +A E+ P      +Y   H  +  +  L
Sbjct: 345 DLHEVWYNRGYALDDLGRFEEA-----LTSYNKALELKP------DY---HEAWNNRGLL 390

Query: 287 VEQLTETALAVTNHG------PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHE 340
           +  L     A+T++       P    ++ N   +    G  E+A   Y  +++     HE
Sbjct: 391 LHNLGRFEEALTSYNKALELKPDYHEAWNNRGNALDKLGRIEEAIASYDKALELKPDYHE 450

Query: 341 FIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLR 400
               +   G     LG    A+ +++K LEI PD  E       +   LG+IE A     
Sbjct: 451 ---AWNNRGNALRNLGRLEEAIASYDKALEIKPDYHEAWNNRVLLLDNLGRIE-AIASYD 506

Query: 401 KAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPI--EVLNNIGVIH 458
           KA +I P D +A+ + G  L++      L   + A     KA E  P   E   N GV  
Sbjct: 507 KALEIKPDDHEAWNNRGYALVN------LGRIEEAIASWDKALEIKPDYHEAWYNRGVAL 560

Query: 459 FEKGEFESAHQSFKDAL 475
              G  E A  S+ +AL
Sbjct: 561 VNLGRREDAIASWDEAL 577



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 84/358 (23%), Positives = 141/358 (39%), Gaps = 32/358 (8%)

Query: 127 EPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYK 186
           E   W  +G     KG+ E A +++   LE   +   A   +     N GR+ +++    
Sbjct: 142 ETEEWKKRGDEQCMKGDFEDAIASYDKALEFKPNLHEAWYIRGLALGNLGRFEEAIASCD 201

Query: 187 RALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEAL----VALAVMDL 242
           +AL++ P     +    G     LG+L  A  ++ +AL+  P+  EA     +AL  +  
Sbjct: 202 KALEIKPDLH-EVWNNRGRALDDLGRLEDAIASYDKALKFKPDKHEAWSSRGLALVKLGR 260

Query: 243 QANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGP 302
             +  A   K ++      E++    +AL+ L             E+   +        P
Sbjct: 261 LQDAIASYDKALKFKPDKHEVWNIRGLALDDLGR----------FEEAIASYDKALKFKP 310

Query: 303 TKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSAL 362
               ++Y    + ++ G  E+A   +  +++     HE    +Y  G     LG F  AL
Sbjct: 311 DLHEAWYIRGLALYNLGRREEAIASWDKALEIKPDLHEV---WYNRGYALDDLGRFEEAL 367

Query: 363 TNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS 422
           T++ K LE+ PD  E     G +   LG+ E+A     KA ++ P   +A+         
Sbjct: 368 TSYNKALELKPDYHEAWNNRGLLLHNLGRFEEALTSYNKALELKPDYHEAW--------- 418

Query: 423 SDTGAALDAF---KTARTLLKKAGEEVPI--EVLNNIGVIHFEKGEFESAHQSFKDAL 475
           ++ G ALD     + A     KA E  P   E  NN G      G  E A  S+  AL
Sbjct: 419 NNRGNALDKLGRIEEAIASYDKALELKPDYHEAWNNRGNALRNLGRLEEAIASYDKAL 476


>gi|328954592|ref|YP_004371926.1| hypothetical protein Desac_2946 [Desulfobacca acetoxidans DSM
           11109]
 gi|328454916|gb|AEB10745.1| Tetratricopeptide TPR_2 repeat-containing protein [Desulfobacca
           acetoxidans DSM 11109]
          Length = 668

 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 77/303 (25%), Positives = 134/303 (44%), Gaps = 33/303 (10%)

Query: 121 SRIDMHEPS---TWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGR 177
           SRI  + P    ++  +G +    G+ E A + F  VL  D     A   +      RGR
Sbjct: 111 SRIIANHPDHVESYYNRGLIYTLLGKEELAIADFGTVLRLDPVRPAAYYNRGMAHSRRGR 170

Query: 178 YSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLD-PENVEALVA 236
           Y  ++  Y RAL+++P       L  G+   KLG+   A++ FQ+A  L  P  +E+ V 
Sbjct: 171 YDQAIADYNRALELNPGDAQVYHLR-GIAYSKLGRSDLAKEDFQKARGLQIPVTLES-VP 228

Query: 237 LAVMDLQANEAAGIRKGMEKMQ---------RAFE-IYPYCAMALNYLANHFFFTGQHFL 286
            A+ D +A  +  +R+     Q         R+ + IY       N   +HFF       
Sbjct: 229 PALTD-EARPSREVRESAPPEQFITVRSSLDRSIKPIY-------NQGVDHFFNKQYDLA 280

Query: 287 VEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK-EINKPHEFIFPY 345
           V + ++    V N  P    +Y+N    Y  KG  E A   + A ++ + N+   ++   
Sbjct: 281 VSEFSQ----VINAHPNFPEAYFNRGMIYALKGQDELAIADFNAVLRIDPNRGDAYV--- 333

Query: 346 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKI 405
              G  Q++ G    AL +F + L+  P + +  +A G++Y  L + ++A+E  +KA ++
Sbjct: 334 -NRGMAQVRRGRLEKALADFNRALQFNPSDAQIYRARGNVYDMLHKTQQAREDFQKAKEL 392

Query: 406 DPR 408
             R
Sbjct: 393 SGR 395



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 84/374 (22%), Positives = 148/374 (39%), Gaps = 66/374 (17%)

Query: 123 IDMHE--PSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSD 180
           I+ H   P  +  +G +   KG+ E A + F  VL  D +   A + +   +  RGR   
Sbjct: 288 INAHPNFPEAYFNRGMIYALKGQDELAIADFNAVLRIDPNRGDAYVNRGMAQVRRGRLEK 347

Query: 181 SLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLD------------- 227
           +L  + RALQ +PS    I    G     L +  +AR+ FQ+A +L              
Sbjct: 348 ALADFNRALQFNPSD-AQIYRARGNVYDMLHKTQQAREDFQKAKELSGRVAYSPPSAQDT 406

Query: 228 ----PENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQ 283
               P +   +VA +   +   E+A  +   +K+Q A +I P  A A       ++  G 
Sbjct: 407 AIPVPPSTRPVVAPSAGPVAPPESAADQAAWDKIQNALKINPKNADA-------YYQRGG 459

Query: 284 HFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIF 343
             L     + A+A             + +RS   +  + KA                   
Sbjct: 460 LQLKRGKIDDAIA-------------DFSRSLELRPKFVKA------------------- 487

Query: 344 PYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAA 403
            Y   G    K G F  AL +  + L++ PD+ E+L   G IY +    ++A   L +A 
Sbjct: 488 -YVDRGTAWAKKGQFDQALVDLNRALDLDPDSVESLNNRGGIYARQSMYDRALSDLNRAL 546

Query: 404 KIDPRDAQAFIDLGEL-LISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKG 462
            ++P  A+A+ +  ++   +     A+   + A +L  K       +   N G+I+ ++ 
Sbjct: 547 DLNPNYAKAYYNRAQVYYFTGHLQQAVADLEKAVSLDPKDA-----DAYYNRGLIYDKRK 601

Query: 463 EFESAHQSFKDALG 476
           +++ A   F  AL 
Sbjct: 602 QYDLAIADFNQALA 615



 Score = 39.7 bits (91), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 48/205 (23%), Positives = 83/205 (40%), Gaps = 28/205 (13%)

Query: 278 FFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINK 337
           +F T Q+ L   +   +  + NH P    SYYN    Y   G  E+  +    +V  ++ 
Sbjct: 97  YFHTKQYDLA--VATFSRIIANH-PDHVESYYNRGLIYTLLGK-EELAIADFGTVLRLDP 152

Query: 338 PHEFIFP--YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKA 395
               + P  YY  G    + G +  A+ ++ + LE+ P + +     G  Y +LG+ + A
Sbjct: 153 ----VRPAAYYNRGMAHSRRGRYDQAIADYNRALELNPGDAQVYHLRGIAYSKLGRSDLA 208

Query: 396 QELLRKA---------AKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEV 446
           +E  +KA           + P    A  D           A  + F T R+ L ++    
Sbjct: 209 KEDFQKARGLQIPVTLESVPP----ALTDEARPSREVRESAPPEQFITVRSSLDRS---- 260

Query: 447 PIEVLNNIGVIHFEKGEFESAHQSF 471
            I+ + N GV HF   +++ A   F
Sbjct: 261 -IKPIYNQGVDHFFNKQYDLAVSEF 284


>gi|148255708|ref|YP_001240293.1| hypothetical protein BBta_4342 [Bradyrhizobium sp. BTAi1]
 gi|146407881|gb|ABQ36387.1| putative TPR repeat protein [Bradyrhizobium sp. BTAi1]
          Length = 1406

 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 61/252 (24%), Positives = 111/252 (44%), Gaps = 46/252 (18%)

Query: 166 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 225
           LG AC +   GR+++++  Y+RAL + P+ P A+ L IG C+  +GQ   A + +QRAL 
Sbjct: 192 LGDACRQL--GRHAEAIAHYERALTLQPNAP-AVLLNIGGCQQAIGQTEAAVRTYQRALV 248

Query: 226 LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 285
           L P   EA   L  + L+ N                  +P           H+       
Sbjct: 249 LSPHLAEAHYNLGNLHLEMNS-----------------WPIAVF-------HY------- 277

Query: 286 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 345
                 E A+A     P    ++ NLA +  S+G +E+A  +Y  +++   +P  +   +
Sbjct: 278 ------ERAIA---ERPDFPEAHNNLANALQSRGRHEEALAHYDEALRR--RP-SYAIAH 325

Query: 346 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKI 405
                    +  F  A+  +   L + P +  TL  L  + + +G++++A++  R A  I
Sbjct: 326 RNRADTLRNMKRFDEAIAGYHDALALEPADTTTLNHLAGVLMIVGRLDEAEQAYRSALAI 385

Query: 406 DPRDAQAFIDLG 417
           +PR+    ++ G
Sbjct: 386 NPRNIGVHLNYG 397



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 66/288 (22%), Positives = 123/288 (42%), Gaps = 10/288 (3%)

Query: 132  VGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQV 191
            V   + L  +G+   A + F+++L        AL+G   +     R  ++ + ++RA+ V
Sbjct: 786  VAVARKLQGRGDNNDAEAIFRLILAGQPRQFDALVGLGMICSGSSRLDEAKDCFQRAVAV 845

Query: 192  HPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIR 251
            +     A    IG      G+   A   ++ AL L P +   L A A++  + N+     
Sbjct: 846  NAKSAEA-HGSIGAVEASAGRYDAAVGHYETALSLSPNHPGILYAFAMV--RQNQGMS-E 901

Query: 252  KGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNL 311
            + M  ++RA E  P    A   L N  +  G+     +  +  L V    P  + ++ N+
Sbjct: 902  EAMVLLRRAIENKPQHLDAHFALGNLLYTAGKDI---EAAKCYLKVLEFSPEHAETHNNI 958

Query: 312  ARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEI 371
            A     +G  E+A  +Y  ++   ++P ++   Y  LG   L+L     A+      L++
Sbjct: 959  ANVLLRQGHRERAIEHYKRAIA--SRP-DYGDAYGNLGNAYLELNRLEEAIEQNLLALKL 1015

Query: 372  YPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGEL 419
             P+   +   LG  Y  LG+ E+A     KA ++ P DA   ++L  +
Sbjct: 1016 KPERFGSYNNLGVAYQALGRFEEATAAFEKALELAPDDAPIHLNLANM 1063



 Score = 45.1 bits (105), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 63/265 (23%), Positives = 113/265 (42%), Gaps = 13/265 (4%)

Query: 211  GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 270
            G    A   F+  L   P   +ALV L ++    + ++ + +  +  QRA  +    A A
Sbjct: 796  GDNNDAEAIFRLILAGQPRQFDALVGLGMI---CSGSSRLDEAKDCFQRAVAVNAKSAEA 852

Query: 271  LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 330
               +       G++       ETAL+++   P      Y  A    ++G  E+A +    
Sbjct: 853  HGSIGAVEASAGRYDAAVGHYETALSLS---PNHPGILYAFAMVRQNQGMSEEAMVLLRR 909

Query: 331  SVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLG 390
            +++  NKP + +  ++ LG +    G    A   + KVLE  P++ ET   + ++ ++ G
Sbjct: 910  AIE--NKP-QHLDAHFALGNLLYTAGKDIEAAKCYLKVLEFSPEHAETHNNIANVLLRQG 966

Query: 391  QIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEV 450
              E+A E  ++A    P    A+ +LG   +  +     +A +     LK   E      
Sbjct: 967  HRERAIEHYKRAIASRPDYGDAYGNLGNAYL--ELNRLEEAIEQNLLALKLKPER--FGS 1022

Query: 451  LNNIGVIHFEKGEFESAHQSFKDAL 475
             NN+GV +   G FE A  +F+ AL
Sbjct: 1023 YNNLGVAYQALGRFEEATAAFEKAL 1047



 Score = 40.8 bits (94), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 77/349 (22%), Positives = 136/349 (38%), Gaps = 72/349 (20%)

Query: 348 LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 407
           LG    +LG    A+ ++E+ L + P+    L  +G     +GQ E A    ++A  + P
Sbjct: 192 LGDACRQLGRHAEAIAHYERALTLQPNAPAVLLNIGGCQQAIGQTEAAVRTYQRALVLSP 251

Query: 408 RDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESA 467
             A+A  +LG L +  ++   +  F   R + ++   + P E  NN+      +G  E A
Sbjct: 252 HLAEAHYNLGNLHLEMNSW-PIAVFHYERAIAER--PDFP-EAHNNLANALQSRGRHEEA 307

Query: 468 HQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTV 527
              + +AL           +  +Y I               HR            N+   
Sbjct: 308 LAHYDEAL----------RRRPSYAI--------------AHR------------NRADT 331

Query: 528 LFNLARLLEQI---HDTVA------------ASVLYRLILFKYQDYVDAYLRLAAIAKAR 572
           L N+ R  E I   HD +A            A VL  +I+ +  +   AY    AI    
Sbjct: 332 LRNMKRFDEAIAGYHDALALEPADTTTLNHLAGVL--MIVGRLDEAEQAYRSALAINPRN 389

Query: 573 NNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF-----RAASDATDGKD 627
             + L+  +V      + ++P    +   +E  +DD   A+ T      RA +D  DG+ 
Sbjct: 390 IGVHLNYGVVKPFTVDDSRWPALQDLAASVETLSDD---ARITLHFTLGRAYADVKDGEK 446

Query: 628 SYATLSLGNWNYFAALRNEKRAPKLEAT--HLEKAKELYTRVIVQHTSN 674
           S   L  GN     AL   + +     T   +E+ +++++R ++Q  +N
Sbjct: 447 SLRHLQAGN-----ALERRRISYDENQTLRQMERIRDVFSRDMLQARAN 490


>gi|422302483|ref|ZP_16389846.1| Serine/threonine protein kinase [Microcystis aeruginosa PCC 9806]
 gi|389788307|emb|CCI16150.1| Serine/threonine protein kinase [Microcystis aeruginosa PCC 9806]
          Length = 707

 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 87/351 (24%), Positives = 156/351 (44%), Gaps = 31/351 (8%)

Query: 134 KGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHP 193
           +GQ          A +++   L+ + D + AL G+A       RYS++L  Y++A+Q++P
Sbjct: 338 QGQTFYQLKRYTDALNSYGQALKINPDYLEALQGKADALLALQRYSEALNTYEKAIQINP 397

Query: 194 SCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKG 253
               A  LG G    KLG+  +A  +F R L  +P   +A    A + L+  + +  +K 
Sbjct: 398 DSAWAAWLGRGEALDKLGKNQEALASFDRVLSFNPAASQAWQGKADIYLELQQYSAAQKA 457

Query: 254 MEKM----QRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGP----TKS 305
           ++K+    Q   +I+     +L  L +   + G     EQ    ALA+          K 
Sbjct: 458 LDKLLTFQQNDAKIWYKKGWSLQNLED---YEGAVKAYEQ----ALAIEPDNALIWYQKG 510

Query: 306 HSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNF 365
           +S+Y L +   +   Y KAG +          P +F   +Y  G +  KLG    AL  F
Sbjct: 511 NSFYQLNKINDALESYSKAGQF---------NP-QFSQAHYSQGIILQKLGRKSEALQAF 560

Query: 366 EKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SD 424
            +  E   +  +     G +  Q+ + ++A     KA +I  + A+ FI +G       D
Sbjct: 561 TQATEANSNYYQAWLNQGALLHQMERFQEAIASYEKARRISSQKAEVFIGIGNAWYRLGD 620

Query: 425 TGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
              A++A++ A    K    + P E   ++G   F+ G++E A Q+++++L
Sbjct: 621 YPQAINAYQQAIQRQK----DNP-ETWKSLGNSCFKLGQYERAIQAYQESL 666


>gi|45357839|ref|NP_987396.1| hypothetical protein MMP0276 [Methanococcus maripaludis S2]
 gi|45047399|emb|CAF29832.1| Conserved hypothetical protein [Methanococcus maripaludis S2]
          Length = 344

 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 73/319 (22%), Positives = 135/319 (42%), Gaps = 20/319 (6%)

Query: 109 HFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQ 168
           +++ +   YN A   +      WV KG  LL  G   +++  F   L  D +N  A  G 
Sbjct: 40  NYVDSISEYNLALLENPKSAEIWVNKGNSLLKLGIYGESTECFDKALLIDPENSEAFNGL 99

Query: 169 ACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDP 228
             V    G Y  +LE Y ++L +      A +   G+    + +  +A   F +++ ++ 
Sbjct: 100 GTVLSKTGNYQKALEMYDKSLNIDSENSEAWK-NKGITLNNMQRYSEAIDCFDKSISINA 158

Query: 229 ENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVE 288
           +N +          +  E     K ++   +A  I      AL          G  +L  
Sbjct: 159 KNSDVWYNKGETQFKLGE---YEKSIDSYNKALLIDEKMETAL-------LGKGNSYLKL 208

Query: 289 QLTETALAVTNH----GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFP 344
           Q  E+A+   N      P   +  Y  A +Y    ++E A  YY  ++ EIN  +  I  
Sbjct: 209 QNYESAIECFNTAETINPKSEYPPYYKADAYRDTENFEYALKYYDEAL-EINPSNSDILI 267

Query: 345 YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAK 404
             G+   ++K  ++ +A++NF+  +++ P N +     G+ YV L   E +    +KA +
Sbjct: 268 SKGICLDKMK--NYSAAISNFDLAIQLDPKNVQIWILKGNSYVGLKDYESSISCYKKALE 325

Query: 405 IDPR--DAQAFIDLGELLI 421
           I+P+  +A+  ID+ E +I
Sbjct: 326 IEPKNENAKENIDIIEKII 344



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 59/226 (26%), Positives = 102/226 (45%), Gaps = 20/226 (8%)

Query: 301 GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRS 360
           G  KS SY +     +++G+Y  +   Y  ++ E  K  E    +   G   LKLG +  
Sbjct: 21  GDQKSKSYNDKGLELYNQGNYVDSISEYNLALLENPKSAEI---WVNKGNSLLKLGIYGE 77

Query: 361 ALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 420
           +   F+K L I P+N E    LG +  + G  +KA E+  K+  ID  +++A+ + G  L
Sbjct: 78  STECFDKALLIDPENSEAFNGLGTVLSKTGNYQKALEMYDKSLNIDSENSEAWKNKGITL 137

Query: 421 ISSDT-GAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGI 479
            +      A+D F  + ++  K       +V  N G   F+ GE+E +  S+  AL    
Sbjct: 138 NNMQRYSEAIDCFDKSISINAKNS-----DVWYNKGETQFKLGEYEKSIDSYNKAL---- 188

Query: 480 WLTLLDSKTKTYVIDASASMLQFKD----MQLFHRFENDGNHVELP 521
              L+D K +T ++    S L+ ++    ++ F+  E      E P
Sbjct: 189 ---LIDEKMETALLGKGNSYLKLQNYESAIECFNTAETINPKSEYP 231


>gi|196018208|ref|XP_002118767.1| hypothetical protein TRIADDRAFT_62778 [Trichoplax adhaerens]
 gi|190578271|gb|EDV18747.1| hypothetical protein TRIADDRAFT_62778 [Trichoplax adhaerens]
          Length = 904

 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 144/691 (20%), Positives = 268/691 (38%), Gaps = 145/691 (20%)

Query: 117 YNKASRIDMHE-----PS---TWVGKGQLLLAKGEVEQASSAFKIVLEAD----RDNVPA 164
           YNK+ +I + +     PS   T+   GQ+   +G+ + A S +   L+ D     DN P+
Sbjct: 2   YNKSLKIKLTQLGDSHPSIAVTYSNIGQVYNDQGKYDDALSMYNKSLKIDLTQLGDNHPS 61

Query: 165 LLGQAC----VEFNRGRYSDSLEFYKRALQV--------HPSCPGAIRLGIGLCRYKLGQ 212
           +    C    V  ++G+Y D+L  Y ++L++        HPS      L IG      G+
Sbjct: 62  IAVTYCNIGQVYNHQGKYDDALSVYNKSLKINLTQVNNNHPSI-ATTYLNIGGVYIHQGK 120

Query: 213 LGKARQAFQRAL-----QLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYC 267
              A   F ++L     QL   +    V  + + L  N        +    ++ +I    
Sbjct: 121 YDDALSMFNKSLKIRLTQLGDNHPSIAVTYSNIGLVYNHQGKYDDALSMYNKSLKI---- 176

Query: 268 AMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLY 327
                                QLT+    + ++ P+ + +Y+N+   Y   G Y+ A   
Sbjct: 177 ---------------------QLTQ----LNDNHPSIAMTYHNIGDVYSDSGKYDDALSM 211

Query: 328 YMASVK----EINKPHEFI-FPYYGLGQVQLKLGDFRSALTNFEKVLEI--------YPD 374
           Y  S+K    ++N  H  I   Y+ +G+V    G +  AL+ + K L+I        +P 
Sbjct: 212 YNKSLKIQLTQLNNNHPSIATTYHSIGKVYKDQGKYDDALSMYNKSLKILLTQLDDNHPS 271

Query: 375 NCETLKALGHIYVQLGQIEKAQELLRKAAKID--------PRDAQAFIDLGELLISSDTG 426
              T   +G +Y   G+ + A  +  K+ KI         P  A  + ++G   +  D G
Sbjct: 272 IAVTYSNIGLVYKYQGKYDDALSMYNKSLKIQLIQLDDNHPSIATTYHNIGS--VYRDQG 329

Query: 427 AALDAF----KTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDALGDGIW 480
              DA     K+ + LL +  +  P      +NI  ++  + +++ A   +  +L   I 
Sbjct: 330 KYDDALSMYNKSLKILLTQLNDNHPSIAATYHNIADVYNHQAKYDDALSMYNKSL--KIK 387

Query: 481 LTLLDSKTKTYVIDASASMLQFKDMQLFHR----FENDGNHVE-LPWNKVTVLFNLARLL 535
           LT LD        D   S+        +H     + + GN+ + L     ++   L +L 
Sbjct: 388 LTQLD--------DNHPSI-----ATTYHNIGGVYNDQGNYDDALSMYNKSLKIQLTQLG 434

Query: 536 EQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNA 595
           +  H ++AA+     +++ +Q           IA   +N+ +  E         GKY +A
Sbjct: 435 DN-HPSIAATYHNIGVVYNHQ---------GNIATIYHNIGVVYE-------DQGKYDDA 477

Query: 596 LSMLG-DLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEA 654
           LSM    L+++         +     +   G      + L    Y  AL    ++ K++ 
Sbjct: 478 LSMYNKSLKIRQTQLGDNHPSIATTYNNIGG------VYLHQGKYDDALSMYNKSLKIQP 531

Query: 655 THLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFT---QVQEAASGSVFV 711
           T L         +I+  T      +  G V   +G++D +  ++    ++Q    G   +
Sbjct: 532 TQLGD-----NHLIIPAT-----YHNIGSVYIHQGKYDDALSMYNKSLKIQLTQFGDNHL 581

Query: 712 QMPDVWINLAHVYFAQGNFALAMKMYQNCLR 742
            +   + N+  VY  QG +  A+ MY   L+
Sbjct: 582 SITVTYSNIGQVYNHQGKYDDALSMYNKSLK 612



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 90/431 (20%), Positives = 176/431 (40%), Gaps = 82/431 (19%)

Query: 88  ALGVYYTYLGKIETKQREKEEHFILATQYYNKASRI------DMHE--PSTWVGKGQLLL 139
           ++   Y  +G +   Q + ++    A   YNK+ +I      D H   P+T+   G + +
Sbjct: 498 SIATTYNNIGGVYLHQGKYDD----ALSMYNKSLKIQPTQLGDNHLIIPATYHNIGSVYI 553

Query: 140 AKGEVEQASSAF----KIVLEADRDNVPAL------LGQACVEFNRGRYSDSLEFYKRAL 189
            +G+ + A S +    KI L    DN  ++      +GQ  V  ++G+Y D+L  Y ++L
Sbjct: 554 HQGKYDDALSMYNKSLKIQLTQFGDNHLSITVTYSNIGQ--VYNHQGKYDDALSMYNKSL 611

Query: 190 QVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAG 249
           ++  +  G     I      +G + K +  +  AL +  ++++ L+              
Sbjct: 612 KIELTQLGDNHPSIATTYINIGSVYKDQGKYDDALSMYNKSLKILLT------------- 658

Query: 250 IRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAV------TNHGPT 303
                    +  + +P  A+  N +   +   G++     +   +L +       NH P+
Sbjct: 659 ---------QLGDNHPSIALTYNNIGQVYRDQGKYDDALSMYNKSLKIRLTQLDDNH-PS 708

Query: 304 KSHSYYNLARSYHSKGDYEKAGLYYMASVK----EINKPHEFI-FPYYGLGQVQLKLGDF 358
            + +Y N+ + Y+ +G Y+ A   Y  S+K    ++   H  I   Y+ +  V    G +
Sbjct: 709 IAITYSNVGQVYNDQGKYDDALSMYNKSLKIKLTQLGHNHPSIAATYHSIADVYKDQGKY 768

Query: 359 RSALTNFEKVLEI--------YPDNCETLKALGHIYVQLGQIEKAQELLRKAAKID---- 406
             AL+ + K L+I        +P    T   +G +Y   G+ + A  +  K+ KI     
Sbjct: 769 DDALSMYNKSLKIKLTQLNDNHPSIATTYHNIGVVYKDQGEYDDALSMCNKSLKIQLTQL 828

Query: 407 ----PRDAQAFIDLGELLISSDTGAALDAF----KTARTLLKKAGEEVP--IEVLNNIGV 456
               P  A  +  +G   I  D G   DA     K+ +  L + G   P      +NIG 
Sbjct: 829 GHNHPGIAATYNSIGS--IYKDQGKYDDALSMYNKSLKIKLTQLGHNHPSIATTYHNIGN 886

Query: 457 IHFEKGEFESA 467
           ++ ++G ++ A
Sbjct: 887 VYKDQGNYDDA 897


>gi|146182723|ref|XP_001025109.2| TPR Domain containing protein [Tetrahymena thermophila]
 gi|146143748|gb|EAS04864.2| TPR Domain containing protein [Tetrahymena thermophila SB210]
          Length = 2120

 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 78/353 (22%), Positives = 155/353 (43%), Gaps = 51/353 (14%)

Query: 106 KEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPAL 165
           K++ F  A +YY++A  +D +  +  VGKG  L  +G+ E A   ++  +  +    P  
Sbjct: 209 KQKEFDKAIEYYDQAMEVDTNNINILVGKGDCLRKQGQYEAALECYEYGMNLN----PPH 264

Query: 166 LGQACVEFNRG-------RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQ 218
             Q  + FN+G       +  +++E Y +A  + P  P        L  Y LG+L +   
Sbjct: 265 KYQFRILFNKGNIYKCMGKNKEAIECYSKASLLDPQNPNTY-FNKALAFYSLGELDEVID 323

Query: 219 AFQRALQLDPENVEALV--ALAVMDL-----------QANEAAG------IRKG-----M 254
            + R ++ +P +  AL+   +A+ ++           +A+E         + KG     +
Sbjct: 324 NYSRVVKQNPRDQHALLNKGMALREIGEFGPAVECFVKASEMKARNARQYLNKGNALFQI 383

Query: 255 EKMQRAFEIYPYCAMALNYLANHFF--FTGQHFLVEQLTETALAVTNHG------PTKSH 306
           +K++ A   Y    M    + N+F+  F     ++ +L  T   +  +       P    
Sbjct: 384 DKLEDALICYKKAIM----IENNFYEAFLNMGVVLNELGRTVEEIECYKKVLELKPDDVK 439

Query: 307 SYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFE 366
           + YN A +    G+ E++   +   +K IN   + +  Y   G  Q  LG F+ +  +++
Sbjct: 440 ALYNQAVALRELGEVEESAKQFDKVIK-INP--KMVNAYINKGLSQYILGQFKESYDSYK 496

Query: 367 KVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGEL 419
           + L+I  ++ E+   +     Q+ +  KA +LL KA KI P + + +  +GE+
Sbjct: 497 EALKIDNNSIESYINMSQCLRQMKKSNKALKLLMKALKISPNNFELYFQIGEI 549



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 69/308 (22%), Positives = 135/308 (43%), Gaps = 10/308 (3%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
           A + Y+KAS +D   P+T+  K     + GE+++    +  V++ +  +  ALL +    
Sbjct: 287 AIECYSKASLLDPQNPNTYFNKALAFYSLGELDEVIDNYSRVVKQNPRDQHALLNKGMAL 346

Query: 173 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 232
              G +  ++E + +A ++         L  G   +++ +L  A   +++A+ ++    E
Sbjct: 347 REIGEFGPAVECFVKASEMKARNARQY-LNKGNALFQIDKLEDALICYKKAIMIENNFYE 405

Query: 233 ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTE 292
           A + + V+    NE     + +E  ++  E+ P    AL   A      G+   VE+  +
Sbjct: 406 AFLNMGVV---LNELGRTVEEIECYKKVLELKPDDVKALYNQAVALRELGE---VEESAK 459

Query: 293 TALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQ 352
               V    P   ++Y N   S +  G ++++   Y  ++K  N   E    Y  + Q  
Sbjct: 460 QFDKVIKINPKMVNAYINKGLSQYILGQFKESYDSYKEALKIDNNSIE---SYINMSQCL 516

Query: 353 LKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQA 412
            ++     AL    K L+I P+N E    +G IY Q+  I+KA E    + +++P  ++A
Sbjct: 517 RQMKKSNKALKLLMKALKISPNNFELYFQIGEIYKQILNIKKALEYYSYSIQLNPIYSEA 576

Query: 413 FIDLGELL 420
               G  L
Sbjct: 577 IFQKGVCL 584


>gi|94971753|ref|YP_593801.1| hypothetical protein Acid345_4728 [Candidatus Koribacter versatilis
           Ellin345]
 gi|94553803|gb|ABF43727.1| TPR repeat protein [Candidatus Koribacter versatilis Ellin345]
          Length = 718

 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 74/292 (25%), Positives = 127/292 (43%), Gaps = 51/292 (17%)

Query: 185 YKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQA 244
           YK    V PS   A RL +    ++ G+L  A + +++ L+ DP NVEAL +L+++  Q 
Sbjct: 19  YKLCCLVRPS--NAARLMMAREHHEAGRLQPAAKIYEQVLRGDPNNVEALHSLSILASQI 76

Query: 245 NEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTK 304
            E A   +    M++   + P    AL+                                
Sbjct: 77  GETATAER---LMRQVLSLQPEHVGALS-------------------------------- 101

Query: 305 SHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTN 364
                NL  +  S+G  E A   Y   +    +PH     +  LG ++L  GD   A+ +
Sbjct: 102 -----NLGITLQSQGRQEDAIACYEKVIAL--RPHH-AEAHNNLGNLRLAQGDLEQAIAS 153

Query: 365 FEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-S 423
           +++ L++ PD  +    LG+ Y + G   +A+E  R+A    P   +A  +LG +L    
Sbjct: 154 YQRALDLKPDYADAHYNLGNAYQRRGNWTQARESYRRAVASRPEFPEAQNNLGVVLREMG 213

Query: 424 DTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
           +T AA++AF+ A  L  +  +      LNN+GV   E+G   +A + +  A+
Sbjct: 214 ETSAAIEAFERAIALRAEYADP-----LNNLGVALQEQGRMSAAVEHYHQAI 260



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 60/279 (21%), Positives = 115/279 (41%), Gaps = 44/279 (15%)

Query: 142 GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 201
           G ++ A+  ++ VL  D +NV AL   + +    G  + +    ++ L + P   GA+  
Sbjct: 43  GRLQPAAKIYEQVLRGDPNNVEALHSLSILASQIGETATAERLMRQVLSLQPEHVGALS- 101

Query: 202 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 261
            +G+     G+   A   +++ + L P + EA   L  + L   +   + + +   QRA 
Sbjct: 102 NLGITLQSQGRQEDAIACYEKVIALRPHHAEAHNNLGNLRLAQGD---LEQAIASYQRAL 158

Query: 262 EIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDY 321
           ++ P  A A                                     +YNL  +Y  +G++
Sbjct: 159 DLKPDYADA-------------------------------------HYNLGNAYQRRGNW 181

Query: 322 EKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKA 381
            +A   Y  +V   ++P EF      LG V  ++G+  +A+  FE+ + +  +  + L  
Sbjct: 182 TQARESYRRAVA--SRP-EFPEAQNNLGVVLREMGETSAAIEAFERAIALRAEYADPLNN 238

Query: 382 LGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 420
           LG    + G++  A E   +A  + P D +A  +LG  L
Sbjct: 239 LGVALQEQGRMSAAVEHYHQAIALRPADVEAHFNLGSAL 277



 Score = 48.5 bits (114), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 45/179 (25%), Positives = 78/179 (43%), Gaps = 12/179 (6%)

Query: 61  QILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKA 120
           QI E  ++  +      ++ E +  L+ LG+     G+ E            A   Y K 
Sbjct: 75  QIGETATAERLMRQVLSLQPEHVGALSNLGITLQSQGRQED-----------AIACYEKV 123

Query: 121 SRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSD 180
             +  H        G L LA+G++EQA ++++  L+   D   A          RG ++ 
Sbjct: 124 IALRPHHAEAHNNLGNLRLAQGDLEQAIASYQRALDLKPDYADAHYNLGNAYQRRGNWTQ 183

Query: 181 SLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAV 239
           + E Y+RA+   P  P A +  +G+   ++G+   A +AF+RA+ L  E  + L  L V
Sbjct: 184 ARESYRRAVASRPEFPEA-QNNLGVVLREMGETSAAIEAFERAIALRAEYADPLNNLGV 241



 Score = 43.1 bits (100), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 51/225 (22%), Positives = 88/225 (39%), Gaps = 31/225 (13%)

Query: 523 NKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELV 582
           N V  L +L+ L  QI +T  A  L R +L    ++V A   L    +++   + +I   
Sbjct: 61  NNVEALHSLSILASQIGETATAERLMRQVLSLQPEHVGALSNLGITLQSQGRQEDAIACY 120

Query: 583 NEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASD-ATDGKDSYATLS-----LGN 636
            + + +   +  A + LG+L L   D  +A  +++ A D   D  D++  L       GN
Sbjct: 121 EKVIALRPHHAEAHNNLGNLRLAQGDLEQAIASYQRALDLKPDYADAHYNLGNAYQRRGN 180

Query: 637 WNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKD 696
           W                     +A+E Y R +        A N  GVVL E G+   + +
Sbjct: 181 WT--------------------QARESYRRAVASRPEFPEAQNNLGVVLREMGETSAAIE 220

Query: 697 LFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCL 741
            F +       ++  +  D   NL      QG  + A++ Y   +
Sbjct: 221 AFERAI-----ALRAEYADPLNNLGVALQEQGRMSAAVEHYHQAI 260


>gi|268325019|emb|CBH38607.1| conserved hypothetical protein, containing tetratricopeptide
           repeats [uncultured archaeon]
          Length = 425

 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 70/307 (22%), Positives = 126/307 (41%), Gaps = 22/307 (7%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
           A + +NK   +D +    +  +G       + E+A   F   +E D +   A   +    
Sbjct: 118 AIEDFNKTIELDPNYALAYNNRGTAYSDLKQYERAIEDFNKTIELDPNYALAYNNRGTAY 177

Query: 173 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 232
            +  +Y  ++E + + +++ P  P A     GL    L Q  +A + F + ++LDP +  
Sbjct: 178 SDLKQYERAIEDFNKTIELIPDYPFAYS-NRGLTYDNLKQYERAIEDFNKTIELDPNSAA 236

Query: 233 ALV--ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQL 290
           A     L   +L+  E A     +E   +  E+ P    A N     +    Q+   E+ 
Sbjct: 237 AYNNRGLTYDNLKQYERA-----IEDFNKTIELIPNHTFAYNNRGLTYNNLKQY---ERA 288

Query: 291 TETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHE----FIFPYY 346
            E         P  + +Y N   +Y    +YE+A       +++ NK  E    +   YY
Sbjct: 289 IEDFNKTIELDPNSAAAYNNRGNAYRKLEEYERA-------IEDFNKTIELDSNYAGSYY 341

Query: 347 GLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKID 406
             G     L  +  A+ +F K +E+ P++       G+ +  LGQ E+A E   KA ++D
Sbjct: 342 NRGLTYDDLKQYERAIEDFNKTIELDPNSAVIYTNRGNAFKDLGQYERAIEDYNKAIELD 401

Query: 407 PRDAQAF 413
           P D  A+
Sbjct: 402 PNDTDAY 408



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 68/294 (23%), Positives = 120/294 (40%), Gaps = 24/294 (8%)

Query: 131 WVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQ 190
           W  K       GE ++A   F  V+E + ++  +   +  V     +Y  ++E + + ++
Sbjct: 34  WHNKAIGFAMSGEYKKAIECFDKVIELNPNSAGSYYNRGLVYKILKQYERAIEDFNKTIE 93

Query: 191 VHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV--ALAVMDLQANEAA 248
           + P+  GA  +  G     L Q  +A + F + ++LDP    A      A  DL+  E A
Sbjct: 94  LIPTFAGAY-INRGDAYKNLKQYERAIEDFNKTIELDPNYALAYNNRGTAYSDLKQYERA 152

Query: 249 GIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQH-FLVEQLTETALAVTNHGPTKSHS 307
                +E   +  E+ P  A+A N     +    Q+   +E   +T   +    P    +
Sbjct: 153 -----IEDFNKTIELDPNYALAYNNRGTAYSDLKQYERAIEDFNKTIELI----PDYPFA 203

Query: 308 YYNLARSYHSKGDYEKAGLYYMASVKEINKPHEF----IFPYYGLGQVQLKLGDFRSALT 363
           Y N   +Y +   YE+A       +++ NK  E        Y   G     L  +  A+ 
Sbjct: 204 YSNRGLTYDNLKQYERA-------IEDFNKTIELDPNSAAAYNNRGLTYDNLKQYERAIE 256

Query: 364 NFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 417
           +F K +E+ P++       G  Y  L Q E+A E   K  ++DP  A A+ + G
Sbjct: 257 DFNKTIELIPNHTFAYNNRGLTYNNLKQYERAIEDFNKTIELDPNSAAAYNNRG 310



 Score = 48.1 bits (113), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 66/308 (21%), Positives = 115/308 (37%), Gaps = 64/308 (20%)

Query: 176 GRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV 235
           G Y  ++E + + ++++P+  G+     GL    L Q  +A + F + ++L P    A +
Sbjct: 45  GEYKKAIECFDKVIELNPNSAGSY-YNRGLVYKILKQYERAIEDFNKTIELIPTFAGAYI 103

Query: 236 --ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTET 293
               A  +L+  E A     +E   +  E+ P  A+A N                     
Sbjct: 104 NRGDAYKNLKQYERA-----IEDFNKTIELDPNYALAYN--------------------- 137

Query: 294 ALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHE----FIFPYYGLG 349
                           N   +Y     YE+A       +++ NK  E    +   Y   G
Sbjct: 138 ----------------NRGTAYSDLKQYERA-------IEDFNKTIELDPNYALAYNNRG 174

Query: 350 QVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRD 409
                L  +  A+ +F K +E+ PD        G  Y  L Q E+A E   K  ++DP  
Sbjct: 175 TAYSDLKQYERAIEDFNKTIELIPDYPFAYSNRGLTYDNLKQYERAIEDFNKTIELDPNS 234

Query: 410 AQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVL--NNIGVIHFEKGEFESA 467
           A A+ + G   ++ D    L  ++ A     K  E +P      NN G+ +    ++E A
Sbjct: 235 AAAYNNRG---LTYDN---LKQYERAIEDFNKTIELIPNHTFAYNNRGLTYNNLKQYERA 288

Query: 468 HQSFKDAL 475
            + F   +
Sbjct: 289 IEDFNKTI 296


>gi|159026094|emb|CAO86323.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 666

 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 86/351 (24%), Positives = 157/351 (44%), Gaps = 31/351 (8%)

Query: 134 KGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHP 193
           +GQ          A +++   L+ + D + AL G+A       RYS++L  Y++A+Q++P
Sbjct: 297 QGQTFYQLKRYTDALNSYGQALKINPDYLEALQGKADALLALKRYSEALNTYEKAIQINP 356

Query: 194 SCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKG 253
                  LG G    KL +  +A ++F+R L L+P   +A    A + L+  + +  +K 
Sbjct: 357 DSAWQAWLGRGKALDKLDKNQEALESFERVLSLNPAASQAWQGKADIYLELQQYSAAQKA 416

Query: 254 MEKM----QRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGP----TKS 305
           +EK+    Q   +I+     +L  L +   + G     +Q    ALA+ +        K 
Sbjct: 417 LEKLLTFQQNDAKIWYKKGWSLQNLED---YEGAVKAYDQ----ALAIESDNALIWYQKG 469

Query: 306 HSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNF 365
           +S Y L +  ++   Y KAG +          P +F   +Y  G +  KLG    AL  F
Sbjct: 470 NSLYQLNKINNALESYSKAGQF---------NP-QFSQAHYSQGIILQKLGRNSEALEAF 519

Query: 366 EKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SD 424
            +  +   +  +     G +  QL + ++A     KA +I  R ++ FI +G       D
Sbjct: 520 TQATKANSNYYQAWLNQGALLHQLERFQEAIASYEKARRISSRKSEVFIGIGNACYRLGD 579

Query: 425 TGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
              A+ A++ A    K    + P E   ++G   F+ G++E A Q+++++L
Sbjct: 580 YSQAITAYQQAIQRQK----DNP-ETWKSLGNSWFKLGQYERAIQAYQESL 625



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 70/326 (21%), Positives = 133/326 (40%), Gaps = 52/326 (15%)

Query: 80  YERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLL 139
           YE+   +N    +  +LG+   K  +K +    A + + +   ++      W GK  + L
Sbjct: 348 YEKAIQINPDSAWQAWLGR--GKALDKLDKNQEALESFERVLSLNPAASQAWQGKADIYL 405

Query: 140 AKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAI 199
              +   A  A + +L   +++      +     N   Y  +++ Y +AL +  S    I
Sbjct: 406 ELQQYSAAQKALEKLLTFQQNDAKIWYKKGWSLQNLEDYEGAVKAYDQALAIE-SDNALI 464

Query: 200 RLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQR 259
               G   Y+L ++  A +++ +A Q +P+  +A  +  ++             ++K+ R
Sbjct: 465 WYQKGNSLYQLNKINNALESYSKAGQFNPQFSQAHYSQGII-------------LQKLGR 511

Query: 260 AFEIYPYCAMALNYLANHF-FFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSK 318
             E       A    +N++  +  Q  L+ QL     A+ +         Y  AR   S+
Sbjct: 512 NSEALEAFTQATKANSNYYQAWLNQGALLHQLERFQEAIAS---------YEKARRISSR 562

Query: 319 GDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCET 378
                             K   FI    G+G    +LGD+  A+T +++ ++   DN ET
Sbjct: 563 ------------------KSEVFI----GIGNACYRLGDYSQAITAYQQAIQRQKDNPET 600

Query: 379 LKALGHIYVQLGQIEKA----QELLR 400
            K+LG+ + +LGQ E+A    QE LR
Sbjct: 601 WKSLGNSWFKLGQYERAIQAYQESLR 626


>gi|118357157|ref|XP_001011828.1| TPR Domain containing protein [Tetrahymena thermophila]
 gi|89293595|gb|EAR91583.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
          Length = 494

 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 73/317 (23%), Positives = 136/317 (42%), Gaps = 30/317 (9%)

Query: 99  IETKQREKEEHFILATQY------------YNKASRIDMHEPSTWVGKGQLLLAKGEVEQ 146
           I+  Q+E   HF    QY            +  A  I +   S  +  G +    G +E+
Sbjct: 167 IKNNQKEYYFHFYKGCQYREPGHENQAINCFLNALEIGLELYSPLINLGIIYSQMGRLEE 226

Query: 147 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVH----PSCPGAIRLG 202
           A S +  +L+    +  ALLG A +   RG   ++  F ++   ++     +C   +   
Sbjct: 227 AQSCYLKILKTHPQDWNALLGLAKLFTKRGMIEEAKFFLQKCSLIYNLDQDNCDDIV--- 283

Query: 203 IGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFE 262
              C  +LG + +A   ++ AL+  P++V  L+ +  + L+      I K     ++  +
Sbjct: 284 --YCYCQLGMIEEAIIWYENALKFMPDSVFHLIIIGQLHLRN---GNIEKSKIFFEKILK 338

Query: 263 IYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYE 322
           I P  +  LN L   ++  G +       + +  +    P    ++ NL   Y ++G  E
Sbjct: 339 IRPNQSYILNNLGFAYYLEGDYSKAISYYQQSQEIN---PNVYDTFNNLGLIYQNQGFAE 395

Query: 323 KAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKAL 382
           +A   Y   VK IN    F      LG +  ++G+F +A+  + +  E  P   E  K+L
Sbjct: 396 QAIQQY---VKAINILPNFAEALNNLGSIYFQIGEFGTAIYYYMEAQEADPQFLEPYKSL 452

Query: 383 GHIYVQLGQIEKAQELL 399
           G+IY ++GQ+E+A  + 
Sbjct: 453 GYIYKKIGQVEEANNIF 469



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 69/258 (26%), Positives = 124/258 (48%), Gaps = 12/258 (4%)

Query: 165 LLGQACVEFNRGRYSDSLEFYKRALQVHP--SCPGAIRLGIGLCRYKLGQLGKARQAFQR 222
           LLGQ  + + +G++ D+L+ +   LQ++   S    I   IG    +     +A + +Q+
Sbjct: 5   LLGQ--IFYKQGKFQDALQTFNELLQINTFKSNVPYIYNTIGSIYEQQNMKDQAIKQYQK 62

Query: 223 ALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTG 282
           AL+ +P + EAL+ L   +L   +   +++  E +++A ++ P C       A  +  + 
Sbjct: 63  ALENEPSDYEALINLG--NLYFFDKNMVKEANECIKKALDLNPNCFFTWYKAAKFYDNSN 120

Query: 283 QHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFI 342
           Q+       + AL++    P  S   Y+LA+ YH  G+ ++A  +    +K  N   E+ 
Sbjct: 121 QNQEAIYNYKKALSIF---PRDSEILYSLAQIYHKIGNNQEAIKFEEKVIK--NNQKEYY 175

Query: 343 FPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKA 402
           F +Y   Q + + G    A+  F   LEI  +    L  LG IY Q+G++E+AQ    K 
Sbjct: 176 FHFYKGCQYR-EPGHENQAINCFLNALEIGLELYSPLINLGIIYSQMGRLEEAQSCYLKI 234

Query: 403 AKIDPRDAQAFIDLGELL 420
            K  P+D  A + L +L 
Sbjct: 235 LKTHPQDWNALLGLAKLF 252



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 66/276 (23%), Positives = 120/276 (43%), Gaps = 51/276 (18%)

Query: 201 LGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRA 260
           + +G+   ++G+L +A+  + + L+  P++  AL+ LA +          ++GM +  + 
Sbjct: 212 INLGIIYSQMGRLEEAQSCYLKILKTHPQDWNALLGLAKL--------FTKRGMIEEAK- 262

Query: 261 FEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGD 320
                             FF  +  L+  L +                 ++   Y   G 
Sbjct: 263 ------------------FFLQKCSLIYNLDQDNCD-------------DIVYCYCQLGM 291

Query: 321 YEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLK 380
            E+A ++Y  ++K +  P   +F    +GQ+ L+ G+   +   FEK+L+I P+    L 
Sbjct: 292 IEEAIIWYENALKFM--PDS-VFHLIIIGQLHLRNGNIEKSKIFFEKILKIRPNQSYILN 348

Query: 381 ALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLK 440
            LG  Y   G   KA    +++ +I+P     F +LG  LI  + G A  A +       
Sbjct: 349 NLGFAYYLEGDYSKAISYYQQSQEINPNVYDTFNNLG--LIYQNQGFAEQAIQQYV---- 402

Query: 441 KAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDA 474
           KA   +P   E LNN+G I+F+ GEF +A   + +A
Sbjct: 403 KAINILPNFAEALNNLGSIYFQIGEFGTAIYYYMEA 438



 Score = 41.6 bits (96), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 8/103 (7%)

Query: 348 LGQVQLKLGDFRSALTNFEKVLEI--YPDNCETL-KALGHIYVQLGQIEKAQELLRKAAK 404
           LGQ+  K G F+ AL  F ++L+I  +  N   +   +G IY Q    ++A +  +KA +
Sbjct: 6   LGQIFYKQGKFQDALQTFNELLQINTFKSNVPYIYNTIGSIYEQQNMKDQAIKQYQKALE 65

Query: 405 IDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP 447
            +P D +A I+LG L          +  K A   +KKA +  P
Sbjct: 66  NEPSDYEALINLGNLYFFDK-----NMVKEANECIKKALDLNP 103


>gi|333993657|ref|YP_004526270.1| putative slei family protein [Treponema azotonutricium ZAS-9]
 gi|333734825|gb|AEF80774.1| putative slei family protein [Treponema azotonutricium ZAS-9]
          Length = 865

 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 76/334 (22%), Positives = 150/334 (44%), Gaps = 42/334 (12%)

Query: 93  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 152
           Y  LG I  + +E ++ + +    ++K   +D + P+     G  L A G +E A++ ++
Sbjct: 145 YNNLGTIYDQLKEYDKAYGI----FHKGLNLDRNNPTLHFNYGVALEANGRLEDAANEYR 200

Query: 153 IVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQ 212
             L +    +  +     + F +GR+  +L+ + R +   PS   A R  +G+ +   G+
Sbjct: 201 AALRSKPGWLEPMNNLGIIHFKQGRHDKALDVFNRIIDSDPSNAEA-RNNMGVIQADQGK 259

Query: 213 LGKARQAFQRALQLDPENVEALVAL------------AVMDLQ-----ANEAAGIR---- 251
             +A Q ++RA++ DP   +A+V L            AV++L+       ++A +R    
Sbjct: 260 NKEAVQNYRRAIEADPRYTKAVVNLERTLEESGDFANAVLELEKLVKLTPDSADLRDRLS 319

Query: 252 ----------KGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG 301
                     + +E+ + A E  P    AL  L      TG     +   E  LA+    
Sbjct: 320 GLYLKMERYPEALEQAKAALEWAPEDTQALRVLGAVQRITGNDEEAKAAFEKMLAID--- 376

Query: 302 PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSA 361
           P     + +LA  +  + +Y++A    MA +    +P++       LG++  ++G+   A
Sbjct: 377 PGNYSFHLDLADIHFKRKEYKEAEDCIMAYL--ARRPNDRTAKLL-LGKLYAEMGNKAHA 433

Query: 362 LTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKA 395
           +  FE++ +I P++ E L A   +Y + G +EKA
Sbjct: 434 VQVFEELSKIDPNDTEALAATAELYKESGSVEKA 467



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 80/331 (24%), Positives = 140/331 (42%), Gaps = 25/331 (7%)

Query: 289 QLTETALAVTN---HGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEIN-KPHEFIFP 344
           +LTE A   T      P    +  N+A  Y  +G  + A     A V+ I+ +P +  F 
Sbjct: 55  KLTEAADEFTTLLAKNPQDIEALNNIAVIYRRQGKLQDA---LGALVEAIDLEPTKAEF- 110

Query: 345 YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAK 404
           +Y +G +  ++G+ ++A   + KV+E+ P+       LG IY QL + +KA  +  K   
Sbjct: 111 HYNIGNIHKQMGNLKAASMAYAKVIELDPNYVSAYNNLGTIYDQLKEYDKAYGIFHKGLN 170

Query: 405 IDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLK-KAGEEVPIEVLNNIGVIHFEKGE 463
           +D  +     + G  L ++  G   DA    R  L+ K G    +E +NN+G+IHF++G 
Sbjct: 171 LDRNNPTLHFNYGVALEAN--GRLEDAANEYRAALRSKPGW---LEPMNNLGIIHFKQGR 225

Query: 464 FESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWN 523
            + A   F           ++DS         +  ++Q    +     +N    +E    
Sbjct: 226 HDKALDVFN---------RIIDSDPSNAEARNNMGVIQADQGKNKEAVQNYRRAIEADPR 276

Query: 524 KVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVN 583
               + NL R LE+  D   A +    ++    D  D   RL+ +         ++E   
Sbjct: 277 YTKAVVNLERTLEESGDFANAVLELEKLVKLTPDSADLRDRLSGLYLKMERYPEALEQAK 336

Query: 584 EALKVNGKYPNALSMLGDLE--LKNDDWVKA 612
            AL+   +   AL +LG ++    ND+  KA
Sbjct: 337 AALEWAPEDTQALRVLGAVQRITGNDEEAKA 367



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 70/307 (22%), Positives = 114/307 (37%), Gaps = 44/307 (14%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
           A+  Y K   +D +  S +   G +     E ++A   F   L  DR+N           
Sbjct: 127 ASMAYAKVIELDPNYVSAYNNLGTIYDQLKEYDKAYGIFHKGLNLDRNNPTLHFNYGVAL 186

Query: 173 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 232
              GR  D+   Y+ AL+  P     +   +G+  +K G+  KA   F R +  DP N E
Sbjct: 187 EANGRLEDAANEYRAALRSKPGWLEPMN-NLGIIHFKQGRHDKALDVFNRIIDSDPSNAE 245

Query: 233 ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTE 292
           A   + V  +QA++    ++ ++  +RA E  P    A+                     
Sbjct: 246 ARNNMGV--IQADQGKN-KEAVQNYRRAIEADPRYTKAV--------------------- 281

Query: 293 TALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQ 352
                            NL R+    GD+  A L     VK      +      GL    
Sbjct: 282 ----------------VNLERTLEESGDFANAVLELEKLVKLTPDSADLRDRLSGL---Y 322

Query: 353 LKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQA 412
           LK+  +  AL   +  LE  P++ + L+ LG +    G  E+A+    K   IDP +   
Sbjct: 323 LKMERYPEALEQAKAALEWAPEDTQALRVLGAVQRITGNDEEAKAAFEKMLAIDPGNYSF 382

Query: 413 FIDLGEL 419
            +DL ++
Sbjct: 383 HLDLADI 389


>gi|356570865|ref|XP_003553604.1| PREDICTED: probable UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase SPINDLY-like [Glycine
           max]
          Length = 917

 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 94/394 (23%), Positives = 167/394 (42%), Gaps = 66/394 (16%)

Query: 132 VGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQA-CVEF-NRGRYSDSLEFYKRAL 189
           V    +L ++ +   A + ++ VLE+D  NV AL+G+  C++  N+GR   + E +  A+
Sbjct: 43  VSYANVLRSRNKFVDALAIYERVLESDGANVEALIGKGICLQMQNKGRL--AYESFSEAI 100

Query: 190 QVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVM--DLQAN-- 245
           +V P    A+    G+     G+L +A +++Q+ALQ+DP    A   LA++  D+  N  
Sbjct: 101 KVDPQNACALT-HCGILHKDEGRLVEAAESYQKALQVDPSYKAAAECLAIVLTDIGTNIK 159

Query: 246 EAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALA----VTNHG 301
            A   + G++K   A ++ P+ A A       ++  G  +      +TAL+      +  
Sbjct: 160 LAGNTQDGIQKYFEALKVDPHYAPA-------YYNLGVVYSEMMQYDTALSFYEKAASER 212

Query: 302 PTKSHSYYNLARSYHSKGDYEKAGLYYMASVK-----EINKPHEFIF------------- 343
           P  + +Y N+   + ++GD E A   Y   +      EI K +  I              
Sbjct: 213 PVYAEAYCNMGVIFKNRGDLESAITCYERCLTVSPNFEIAKNNMAIALTDLGTKVKLEGD 272

Query: 344 --------------------PYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALG 383
                                 Y LG    ++  F  A+  +E      P   E    LG
Sbjct: 273 INQGVTLYKKALYYNWHYADAMYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLG 332

Query: 384 HIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAG 443
            IY     ++KA E  + A  I P  +Q+  +LG   +       +DA   A ++++KA 
Sbjct: 333 VIYKDRENLDKAVECYQLALSIKPNFSQSLNNLG---VVYTVQGKVDA---AASMIEKAI 386

Query: 444 EEVPI--EVLNNIGVIHFEKGEFESAHQSFKDAL 475
              P   E  NN+GV++ + G+   A  +++  L
Sbjct: 387 IANPTYAEAYNNLGVLYRDAGDIARAINAYEQCL 420



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 61/262 (23%), Positives = 106/262 (40%), Gaps = 33/262 (12%)

Query: 356 GDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK----AQELLRK---AAKIDPR 408
           G    A  +++K L++ P      + L  +   +G   K     Q+ ++K   A K+DP 
Sbjct: 121 GRLVEAAESYQKALQVDPSYKAAAECLAIVLTDIGTNIKLAGNTQDGIQKYFEALKVDPH 180

Query: 409 DAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPI--EVLNNIGVIHFEKGEFES 466
            A A+ +LG +       + +  + TA +  +KA  E P+  E   N+GVI   +G+ ES
Sbjct: 181 YAPAYYNLGVVY------SEMMQYDTALSFYEKAASERPVYAEAYCNMGVIFKNRGDLES 234

Query: 467 AHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNH-VEL----- 520
           A   ++  L          + +  + I  +   +   D+    + E D N  V L     
Sbjct: 235 AITCYERCL----------TVSPNFEIAKNNMAIALTDLGTKVKLEGDINQGVTLYKKAL 284

Query: 521 --PWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLS 578
              W+    ++NL     ++     A V Y L         +A   L  I K R NL  +
Sbjct: 285 YYNWHYADAMYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRENLDKA 344

Query: 579 IELVNEALKVNGKYPNALSMLG 600
           +E    AL +   +  +L+ LG
Sbjct: 345 VECYQLALSIKPNFSQSLNNLG 366


>gi|425434175|ref|ZP_18814646.1| Serine/threonine protein kinase [Microcystis aeruginosa PCC 9432]
 gi|389677169|emb|CCH93904.1| Serine/threonine protein kinase [Microcystis aeruginosa PCC 9432]
          Length = 736

 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 87/351 (24%), Positives = 157/351 (44%), Gaps = 31/351 (8%)

Query: 134 KGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHP 193
           +GQ          A +++   L+ + D + AL G+A       RYS++L  Y++A+Q++P
Sbjct: 367 QGQTFYQLKRYTDALNSYGQALKINPDYLEALQGKADALLALKRYSEALNTYEKAIQINP 426

Query: 194 SCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKG 253
                  LG G    KL +  +A ++F+R L L+P   +A    A + L+  + +  +K 
Sbjct: 427 DSAWQAWLGRGEALDKLDKNQEALESFERVLSLNPAASQAWQGKADIYLELQQYSAAQKA 486

Query: 254 MEKM----QRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGP----TKS 305
           +EK+    Q   +I+     +L  L +   + G     +Q    ALA+ +        K 
Sbjct: 487 LEKLLTFQQNDAKIWYKKGWSLQNLED---YEGAVKAYDQ----ALAIESDNALIWYQKG 539

Query: 306 HSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNF 365
           +S Y L +  ++   Y KAG +          P +F   YY  G +  KLG    AL  F
Sbjct: 540 NSLYQLNKINNALESYSKAGQF---------NP-QFSQAYYSQGIILQKLGRNSEALEAF 589

Query: 366 EKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SD 424
            +  +   +  +     G +  QL + ++A     KA +I  R ++ FI +G       D
Sbjct: 590 TQATKANSNYYQAWLNQGALLHQLERFQEAIASYEKARRISSRKSEVFIGIGNACYRLGD 649

Query: 425 TGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
              A+ A++ A    K    + P E   ++G   F+ G++E A Q+++++L
Sbjct: 650 YSQAITAYQQAIQRQK----DNP-ETWKSLGNSWFKLGQYERAIQAYQESL 695


>gi|203284115|ref|YP_002221855.1| hypothetical protein BDU_193 [Borrelia duttonii Ly]
 gi|386859420|ref|YP_006272126.1| hypothetical protein Q7M_195 [Borrelia crocidurae str. Achema]
 gi|201083558|gb|ACH93149.1| uncharacterized conserved protein [Borrelia duttonii Ly]
 gi|384934301|gb|AFI30974.1| hypothetical protein Q7M_195 [Borrelia crocidurae str. Achema]
          Length = 380

 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 73/318 (22%), Positives = 133/318 (41%), Gaps = 14/318 (4%)

Query: 123 IDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSL 182
           +D+ E S    +G  L+ +  + +A S F  +L+ D DN  AL+G   +E  +  +  ++
Sbjct: 22  LDVTEKSK---RGYQLIKEERLFEAESLFNDILQKDDDNNYALVGLGDIERKKRNFDKAI 78

Query: 183 EFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDL 242
            +Y++ L  H +   A+  G+G C   LG   KA   ++  L+ D EN+  L  +A    
Sbjct: 79  IYYQKCLAKHSNNNYAL-FGLGDCYRSLGDYKKATDVWEEYLKYDSENITVLTRVAS--- 134

Query: 243 QANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGP 302
              +    +K  +   R  E+ P    AL  +  H ++  + +         +   N   
Sbjct: 135 SYRKLKNFQKSRQSYLRVLELVPDNDYALVGIG-HLYYDFKEYKEALKYWLKMYEINQVK 193

Query: 303 TKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSAL 362
                  ++   Y    ++ K G+Y+     EI+ P+ F +  +GL        ++  AL
Sbjct: 194 IDVRVLTSIGNCYRKLKEFGK-GIYFFKRALEIS-PNNF-YAIFGLADCYRGSKEYAEAL 250

Query: 363 TNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS 422
             +  +++  P N   L  +G  Y  L   E AQ   +KA  +   D   F  LG  L+ 
Sbjct: 251 KYWLTIIDRDPKNNLVLTRVGDTYRYLKDYENAQIYYKKALDV---DFDMFAILGLALLQ 307

Query: 423 SDTGAALDAFKTARTLLK 440
            + G   +A    + L+K
Sbjct: 308 KEQGQYEEALIAIKNLIK 325



 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 72/305 (23%), Positives = 131/305 (42%), Gaps = 15/305 (4%)

Query: 96  LGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVL 155
           LG IE K+R    +F  A  YY K      +      G G    + G+ ++A+  ++  L
Sbjct: 64  LGDIERKKR----NFDKAIIYYQKCLAKHSNNNYALFGLGDCYRSLGDYKKATDVWEEYL 119

Query: 156 EADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGK 215
           + D +N+  L   A        +  S + Y R L++ P    A+ +GIG   Y   +  +
Sbjct: 120 KYDSENITVLTRVASSYRKLKNFQKSRQSYLRVLELVPDNDYAL-VGIGHLYYDFKEYKE 178

Query: 216 ARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLA 275
           A + + +  +++   ++  V  ++ +    +     KG+   +RA EI P    A+  LA
Sbjct: 179 ALKYWLKMYEINQVKIDVRVLTSIGNCY-RKLKEFGKGIYFFKRALEISPNNFYAIFGLA 237

Query: 276 NHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEI 335
           + +   G     E L +  L + +  P  +     +  +Y    DYE A +YY  ++   
Sbjct: 238 DCY--RGSKEYAEAL-KYWLTIIDRDPKNNLVLTRVGDTYRYLKDYENAQIYYKKAL--- 291

Query: 336 NKPHEF-IFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK 394
               +F +F   GL  +Q + G +  AL   + +++  P N      +   Y  LGQIE 
Sbjct: 292 --DVDFDMFAILGLALLQKEQGQYEEALIAIKNLIKTNPKNSILYVNVAECYEALGQIED 349

Query: 395 AQELL 399
           A ++L
Sbjct: 350 AIDIL 354



 Score = 41.2 bits (95), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 36/158 (22%), Positives = 73/158 (46%), Gaps = 5/158 (3%)

Query: 318 KGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCE 377
           K +++KA +YY   + + +  +   +  +GLG     LGD++ A   +E+ L+   +N  
Sbjct: 71  KRNFDKAIIYYQKCLAKHSNNN---YALFGLGDCYRSLGDYKKATDVWEEYLKYDSENIT 127

Query: 378 TLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTART 437
            L  +   Y +L   +K+++   +  ++ P +  A + +G L    D     +A K    
Sbjct: 128 VLTRVASSYRKLKNFQKSRQSYLRVLELVPDNDYALVGIGHLYY--DFKEYKEALKYWLK 185

Query: 438 LLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
           + +    ++ + VL +IG  + +  EF      FK AL
Sbjct: 186 MYEINQVKIDVRVLTSIGNCYRKLKEFGKGIYFFKRAL 223


>gi|91202455|emb|CAJ72094.1| similar to Tpr region of human peroxisomal targeting signal-1
           receptor Pex5 [Candidatus Kuenenia stuttgartiensis]
          Length = 312

 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 66/244 (27%), Positives = 112/244 (45%), Gaps = 14/244 (5%)

Query: 177 RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVA 236
           R    +E  K A++ +P+ P A+   + +   K G L +A  A+++A +L+P + EALV 
Sbjct: 55  RPDKEIEAAKAAVEANPNDP-AVYYNLAVLSDKKGMLDEAVDAYKKATELNPSSEEALVG 113

Query: 237 LAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALA 296
           L  +    N+ A   + +   ++A  I    A A   L       G      +L   A+A
Sbjct: 114 LGKV---LNKKAKSDEAITAFEKALAININNAEAYEGLGLVHVHKGGPDEAIRLFNRAVA 170

Query: 297 VTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLG 356
           +    P    S YNL   Y   G +E+A   ++ ++K   K  EF   +Y LG    KLG
Sbjct: 171 IN---PDLVESRYNLGILYAKNGQFEEAIAEWLKAIKINPKRTEF---HYNLGIAYTKLG 224

Query: 357 DFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDL 416
               A+  ++  LE   +    L  +G +Y++ G  + A+  L KA ++DP     F D+
Sbjct: 225 KLEDAIAVWQNALENTEEISSFLYLIGLVYIEKGDAKSAESFLNKALEVDPE----FYDV 280

Query: 417 GELL 420
            ++L
Sbjct: 281 HKVL 284



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 64/131 (48%), Gaps = 4/131 (3%)

Query: 345 YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAK 404
           Y GLG V +  G    A+  F + + I PD  E+   LG +Y + GQ E+A     KA K
Sbjct: 145 YEGLGLVHVHKGGPDEAIRLFNRAVAINPDLVESRYNLGILYAKNGQFEEAIAEWLKAIK 204

Query: 405 IDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEF 464
           I+P+  +   +LG  +  +  G   DA    +  L+   EE+    L  IG+++ EKG+ 
Sbjct: 205 INPKRTEFHYNLG--IAYTKLGKLEDAIAVWQNALENT-EEIS-SFLYLIGLVYIEKGDA 260

Query: 465 ESAHQSFKDAL 475
           +SA      AL
Sbjct: 261 KSAESFLNKAL 271



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 30/120 (25%), Positives = 62/120 (51%), Gaps = 1/120 (0%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
           A   Y KA+ ++       VG G++L  K + ++A +AF+  L  + +N  A  G   V 
Sbjct: 93  AVDAYKKATELNPSSEEALVGLGKVLNKKAKSDEAITAFEKALAININNAEAYEGLGLVH 152

Query: 173 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 232
            ++G   +++  + RA+ ++P    + R  +G+   K GQ  +A   + +A++++P+  E
Sbjct: 153 VHKGGPDEAIRLFNRAVAINPDLVES-RYNLGILYAKNGQFEEAIAEWLKAIKINPKRTE 211


>gi|390438504|ref|ZP_10226967.1| Similar to tr|Q3M7C2|Q3M7C2_ANAVT Protein prenyltransferase
           (modular protein) [Microcystis sp. T1-4]
 gi|389838086|emb|CCI31091.1| Similar to tr|Q3M7C2|Q3M7C2_ANAVT Protein prenyltransferase
           (modular protein) [Microcystis sp. T1-4]
          Length = 1080

 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 80/310 (25%), Positives = 130/310 (41%), Gaps = 14/310 (4%)

Query: 110 FILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQA 169
           F+ A   Y++A  I       W+ +G  L   G  E+A +++   LE   D   A   + 
Sbjct: 166 FLGAIASYDRALEIKPDFHLAWLIRGFALDNLGRFEKAIASWDRALEIKPDLHEAWNNRG 225

Query: 170 CVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPE 229
               N GR+  ++  Y RAL+  P    A     G   Y LG+  +A  ++ RAL++ P+
Sbjct: 226 NALGNLGRFGQAIASYDRALEFKPDDHLAWN-NRGSALYYLGRFEQAIASYDRALEIKPD 284

Query: 230 NVEALVA--LAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLV 287
             EA     +A+ +L  +E A     +    RA EI P    A NY        G+    
Sbjct: 285 KHEAWYGRGVALGNLGRSEQA-----IASYDRALEIKPDYHDAWNYRGIALADLGRFEQA 339

Query: 288 EQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYG 347
               + AL +    P    ++YN      + G  E+A   Y  +++     H+    +YG
Sbjct: 340 IASFDQALEIK---PDFHLAWYNRGIELGNLGRLEEAIASYDRALEIKPDLHQ---AWYG 393

Query: 348 LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 407
            G     LG F  A+ +++  LEI PD  E     G+    LG+  +A     +A +  P
Sbjct: 394 RGNALKNLGRFEEAIASYDHALEIKPDYHEAWNNRGNALADLGRFAEAIASYDRALEFKP 453

Query: 408 RDAQAFIDLG 417
            D +A+ + G
Sbjct: 454 DDHEAWNNRG 463



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 76/306 (24%), Positives = 131/306 (42%), Gaps = 22/306 (7%)

Query: 122 RIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDS 181
           + D+HE   W  +G  L   G   QA +++   LE   D+  A   +    +  GR+  +
Sbjct: 214 KPDLHE--AWNNRGNALGNLGRFGQAIASYDRALEFKPDDHLAWNNRGSALYYLGRFEQA 271

Query: 182 LEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQA---FQRALQLDPENVEAL--VA 236
           +  Y RAL++ P    A   G G+    LG LG++ QA   + RAL++ P+  +A     
Sbjct: 272 IASYDRALEIKPDKHEAW-YGRGVA---LGNLGRSEQAIASYDRALEIKPDYHDAWNYRG 327

Query: 237 LAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALA 296
           +A+ DL   E A     +    +A EI P   +A     N     G    +E+   +   
Sbjct: 328 IALADLGRFEQA-----IASFDQALEIKPDFHLAW---YNRGIELGNLGRLEEAIASYDR 379

Query: 297 VTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLG 356
                P    ++Y    +  + G +E+A   Y  +++     HE    +   G     LG
Sbjct: 380 ALEIKPDLHQAWYGRGNALKNLGRFEEAIASYDHALEIKPDYHE---AWNNRGNALADLG 436

Query: 357 DFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDL 416
            F  A+ ++++ LE  PD+ E     G     LG++E+A     +A +I P   +A+ + 
Sbjct: 437 RFAEAIASYDRALEFKPDDHEAWNNRGFALGNLGRLEEAIASYDRALEIKPDFHEAWGNR 496

Query: 417 GELLIS 422
           G  + S
Sbjct: 497 GWAVCS 502


>gi|332710566|ref|ZP_08430511.1| serine/threonine protein kinase [Moorea producens 3L]
 gi|332350621|gb|EGJ30216.1| serine/threonine protein kinase [Moorea producens 3L]
          Length = 726

 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 65/293 (22%), Positives = 130/293 (44%), Gaps = 18/293 (6%)

Query: 129 STWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRA 188
           + W  +G+  L     EQA  A+   +E   +  PA  GQ    F    Y ++L  Y +A
Sbjct: 347 TDWYNQGETFLELKRYEQALDAYNRAVEIRGEYAPAWQGQGKTLFALKYYEEALNAYDQA 406

Query: 189 LQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQA---- 244
           +Q+ P    A + G G    +L +   A +AF  AL+L P +++A ++L  + +++    
Sbjct: 407 IQIEPDYSAAWK-GRGKTLEQLERYDAAIKAFNSALELQPNDLDAWISLGNVQVKSKNYF 465

Query: 245 NEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTK 304
           +  A   K ++    +++ +     AL+ L  +          +   E+     ++ P  
Sbjct: 466 DAIASFDKALKLKPDSYQAWYRRGWALHNLRRY----------KAAVESYDRALDYKPNS 515

Query: 305 SHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTN 364
           + ++Y       +   Y+ A   Y  +V+   +P+ F   +Y  G    +LG ++ AL +
Sbjct: 516 AEAWYQRGNDLSNLRKYKDAAKSYQQAVQ--FQPN-FYQAWYSWGNTLNQLGKYQEALGS 572

Query: 365 FEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 417
           F++ +++ P + +   + G    Q+ + E A E   KA K+  +  QA+   G
Sbjct: 573 FDQAVKLQPKSYQAWYSRGWTLHQVQRYEDALEAYYKAIKLKSKPYQAWYSRG 625



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 69/295 (23%), Positives = 128/295 (43%), Gaps = 18/295 (6%)

Query: 117 YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 176
           Y++A +I+    + W G+G+ L      + A  AF   LE   +++ A +    V+    
Sbjct: 403 YDQAIQIEPDYSAAWKGRGKTLEQLERYDAAIKAFNSALELQPNDLDAWISLGNVQVKSK 462

Query: 177 RYSDSLEFYKRALQVHP-SCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV 235
            Y D++  + +AL++ P S     R G  L  + L +   A +++ RAL   P + EA  
Sbjct: 463 NYFDAIASFDKALKLKPDSYQAWYRRGWAL--HNLRRYKAAVESYDRALDYKPNSAEAWY 520

Query: 236 ALAVMDLQANEAAGIRK---GMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTE 292
                  + N+ + +RK     +  Q+A +  P    A     N     G++   E L  
Sbjct: 521 Q------RGNDLSNLRKYKDAAKSYQQAVQFQPNFYQAWYSWGNTLNQLGKY--QEALGS 572

Query: 293 TALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQ 352
              AV    P    ++Y+   + H    YE A   Y  ++K  +KP++    +Y  G   
Sbjct: 573 FDQAVKLQ-PKSYQAWYSRGWTLHQVQRYEDALEAYYKAIKLKSKPYQ---AWYSRGNTF 628

Query: 353 LKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 407
            KL  ++ A+ ++++ +   PD  +   +LG+  V+  + +KA     KA +  P
Sbjct: 629 YKLERYKDAIASYQQAVNYKPDYSQAWYSLGNALVKRNKYKKAIAAYDKAVRYQP 683



 Score = 40.0 bits (92), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 33/131 (25%), Positives = 56/131 (42%), Gaps = 3/131 (2%)

Query: 293 TALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQ 352
           T   V       +  +YN   ++     YE+A   Y  +V EI    E+   + G G+  
Sbjct: 334 TVFMVHTFRGANATDWYNQGETFLELKRYEQALDAYNRAV-EIRG--EYAPAWQGQGKTL 390

Query: 353 LKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQA 412
             L  +  AL  +++ ++I PD     K  G    QL + + A +    A ++ P D  A
Sbjct: 391 FALKYYEEALNAYDQAIQIEPDYSAAWKGRGKTLEQLERYDAAIKAFNSALELQPNDLDA 450

Query: 413 FIDLGELLISS 423
           +I LG + + S
Sbjct: 451 WISLGNVQVKS 461


>gi|332298025|ref|YP_004439947.1| hypothetical protein Trebr_1392 [Treponema brennaborense DSM 12168]
 gi|332181128|gb|AEE16816.1| Tetratricopeptide TPR_2 repeat-containing protein [Treponema
           brennaborense DSM 12168]
          Length = 391

 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 79/342 (23%), Positives = 137/342 (40%), Gaps = 49/342 (14%)

Query: 127 EPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYK 186
           E S    KG   L +  +++A  AF  +LE + +N  AL+G    E  +  + +++E+Y 
Sbjct: 35  EISELSKKGYHFLKENRIKEADDAFNKILELEDNNNYALVGLGDSERKQNHFREAIEYYS 94

Query: 187 RALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANE 246
           R L  HP    A+  G+  C   L Q  KA   +++ L  D  N+  L  +         
Sbjct: 95  RCLTYHPGNNYAL-FGLADCYKALNQYHKAIDIWEQYLMHDDRNITVLTRV--------- 144

Query: 247 AAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSH 306
           A   RK +   +++ ++Y                              L V +     ++
Sbjct: 145 ADAYRK-IRDFKKSKQLY------------------------------LKVLDMEENNAY 173

Query: 307 SYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFE 366
           +   L   ++   +Y  A LYY   + E+N+ +  I     +G    KL  F   +  FE
Sbjct: 174 ALIGLGHLHYDFKEYRDA-LYYWTRMFELNERNVDIRVLTSIGNCHRKLKTFDKGVYYFE 232

Query: 367 KVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTG 426
           + LE  PDN   L  L   Y  + Q  ++ E   K  + DPR+       G+     +TG
Sbjct: 233 RALETEPDNFYALFGLADCYRGMNQQFRSVEYWNKILEKDPRNKVILTRAGDAY--RNTG 290

Query: 427 AALDAFKTARTLLKKAGE-EVPIEVLNNIGVIHFEKGEFESA 467
                ++TA     KA + E  +  +  + +I   +G++E A
Sbjct: 291 ----DYETASAYYNKALDIEFDLYAVLGLALISKGQGKYEEA 328


>gi|170738881|ref|YP_001767536.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium sp.
           4-46]
 gi|168193155|gb|ACA15102.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium sp.
           4-46]
          Length = 1056

 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 83/370 (22%), Positives = 157/370 (42%), Gaps = 16/370 (4%)

Query: 107 EEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALL 166
           +E +  A   YN+A R+D    S  + +G    +KGE ++A + +  VL+ D  +V +  
Sbjct: 141 KEEYDRAIADYNQALRLDPKYLSAALNRGDAFRSKGEYDRAIADYNQVLQIDPRSVVSYN 200

Query: 167 GQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQL 226
            +      +G Y  ++  Y +AL + P    A+     + R K GQ   A + + +ALQL
Sbjct: 201 NRGLAFQGKGEYDRAVADYNQALTLDPGYTIALINRGDVFRIK-GQYDSAIENYNQALQL 259

Query: 227 DPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFL 286
           +P++  A      +     E     + +     A +I P   +AL    + F   G +  
Sbjct: 260 NPKSKIAYNNRGFVFYNKGE---YDRAIADYNSALQIDPRYVVALVNRGDAFVSKGDYDR 316

Query: 287 VEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYY 346
                  AL +    P  + +Y     +  +KG+Y++A + Y  +++   K   ++F + 
Sbjct: 317 AIGDYGHALQIN---PNYAFAYNGRGVALQNKGEYDRAIMDYDQALRLDPK---YVFAFA 370

Query: 347 GLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKID 406
             G      G+   A+ ++ + L + P+  +     G  +    Q  +A E   +  ++D
Sbjct: 371 NRGDAFRSKGEHDVAIADYNQALRLSPNYAKAYNGRGLSFQNKAQYNRAIEDYEQVIRLD 430

Query: 407 PRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFE 465
           PR   A+ + G  L+S  +   A+  +  A  L  K+       V  N G    +KGE++
Sbjct: 431 PRFVAAYNNRGFALVSKGEPTLAIADYDKALLLDPKSA-----TVYANRGRAFQDKGEYD 485

Query: 466 SAHQSFKDAL 475
            A   +  AL
Sbjct: 486 RAIADYDQAL 495



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 72/306 (23%), Positives = 136/306 (44%), Gaps = 10/306 (3%)

Query: 112 LATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACV 171
           LA   Y+KA  +D    + +  +G+    KGE ++A + +   L  +  +  AL  +A +
Sbjct: 452 LAIADYDKALLLDPKSATVYANRGRAFQDKGEYDRAIADYDQALRLNPKDAIALNNRADI 511

Query: 172 EFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENV 231
              R  +  ++  Y +ALQ++P   GA     GL     G+  +A   + +ALQL+P  +
Sbjct: 512 LRLRHEHDRAIASYDQALQLNPKYVGAYN-SRGLAFQDKGEYDRAIANYDQALQLNPRYI 570

Query: 232 EALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLT 291
            A +       +  E A   + +    +A +I     +A N     F   G++       
Sbjct: 571 TAYINRGDAYRRKGEHA---RAISDYNQALQIDQNSVIAYNNRGLCFHEQGEYDRAIIDY 627

Query: 292 ETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQV 351
           + AL +    P  S  + N   ++H KG+Y++A   Y  +++    P      Y   G  
Sbjct: 628 DRALQID---PMYSTGFINRGFAFHKKGEYDRAIADYDRALQI--DPRSAT-AYNNRGFT 681

Query: 352 QLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQ 411
               G++  A+ +++K + I PD   +    G +    G +E++   L +A +++PR A+
Sbjct: 682 FQNRGEYDLAIVDYDKAILIKPDLANSYYHRGTVLRLKGDLERSVADLTEAIRLNPRYAE 741

Query: 412 AFIDLG 417
           A+ D G
Sbjct: 742 AYQDRG 747



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 79/353 (22%), Positives = 140/353 (39%), Gaps = 36/353 (10%)

Query: 134 KGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHP 193
           +G  L  +GE E+A + F + L  +   V A + +     N+G Y  ++  Y  ALQ+ P
Sbjct: 32  RGFELQNRGEHEKAIAEFNLALRLNPKLVSAYINRGFAFRNKGDYDRAIADYDHALQIDP 91

Query: 194 SCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKG 253
           +   A     G   Y  G+  +A   + R+++L  +         +      E     + 
Sbjct: 92  NSVVAFN-NRGDAFYHKGEYDRAIADYNRSIKLSSDKAAVYNNRGLAFFSKEE---YDRA 147

Query: 254 MEKMQRAFEIYP-YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH----GPTKSHSY 308
           +    +A  + P Y + ALN         G  F  +   + A+A  N      P    SY
Sbjct: 148 IADYNQALRLDPKYLSAALN--------RGDAFRSKGEYDRAIADYNQVLQIDPRSVVSY 199

Query: 309 YNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGL-----GQVQLKLGDFRSALT 363
            N   ++  KG+Y++A   Y  ++         + P Y +     G V    G + SA+ 
Sbjct: 200 NNRGLAFQGKGEYDRAVADYNQALT--------LDPGYTIALINRGDVFRIKGQYDSAIE 251

Query: 364 NFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS- 422
           N+ + L++ P +       G ++   G+ ++A      A +IDPR   A ++ G+  +S 
Sbjct: 252 NYNQALQLNPKSKIAYNNRGFVFYNKGEYDRAIADYNSALQIDPRYVVALVNRGDAFVSK 311

Query: 423 SDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
            D   A+  +  A  +             N  GV    KGE++ A   +  AL
Sbjct: 312 GDYDRAIGDYGHALQINPNYA-----FAYNGRGVALQNKGEYDRAIMDYDQAL 359



 Score = 48.5 bits (114), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 46/212 (21%), Positives = 91/212 (42%), Gaps = 15/212 (7%)

Query: 117 YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 176
           Y++A +++    + ++ +G     KGE  +A S +   L+ D+++V A   +      +G
Sbjct: 559 YDQALQLNPRYITAYINRGDAYRRKGEHARAISDYNQALQIDQNSVIAYNNRGLCFHEQG 618

Query: 177 RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVA 236
            Y  ++  Y RALQ+ P       +  G   +K G+  +A   + RALQ+DP +  A   
Sbjct: 619 EYDRAIIDYDRALQIDPMYSTGF-INRGFAFHKKGEYDRAIADYDRALQIDPRSATAY-- 675

Query: 237 LAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALA 296
                   N      +   +   A   Y    +    LAN ++  G    ++   E ++A
Sbjct: 676 --------NNRGFTFQNRGEYDLAIVDYDKAILIKPDLANSYYHRGTVLRLKGDLERSVA 727

Query: 297 ----VTNHGPTKSHSYYNLARSYHSKGDYEKA 324
                    P  + +Y +   ++H+KG+ ++A
Sbjct: 728 DLTEAIRLNPRYAEAYQDRGLTFHAKGEADRA 759


>gi|432331042|ref|YP_007249185.1| tetratricopeptide repeat protein [Methanoregula formicicum SMSP]
 gi|432137751|gb|AGB02678.1| tetratricopeptide repeat protein [Methanoregula formicicum SMSP]
          Length = 4078

 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 104/426 (24%), Positives = 173/426 (40%), Gaps = 80/426 (18%)

Query: 130  TWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALL--GQACVEFNRGRYSDSLEFYKR 187
            TW+ KG  L ++   ++A  A+   LE +     A +  G A ++ N+    D++  Y R
Sbjct: 994  TWMQKGDALASQLLKQEAIGAYSKALEINSGFAEAWIRKGNALMDLNK--VQDAVGAYSR 1051

Query: 188  ALQVHPS-CPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV--ALAVMDLQA 244
            AL+++P+ C   +R G  L   +LG+   A  A+ ++L++DP+N    +    A  DL  
Sbjct: 1052 ALEINPALCDIWMRKGDAL--QQLGKTEDAILAYGKSLKIDPDNEPGWIRQGKAFFDLTR 1109

Query: 245  NEAA--GIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGP 302
             + A       +   QR+ E + Y  +AL  +  H    G   + E L E       +G 
Sbjct: 1110 YQDAIDAFDNAISLNQRSIEAFWYKGLALEKVNRH---EGAIHVFEILLEID---PKNGD 1163

Query: 303  TKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSAL 362
             + H    LA                                          LGD R A+
Sbjct: 1164 AQFHKGLALA-----------------------------------------VLGDHRDAI 1182

Query: 363  TNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG-ELLI 421
             +F+K L+I PD+       G   +++G+   A   L++A +I+    +AF  LG  LL 
Sbjct: 1183 GSFDKTLQILPDSAPAWYNKGKSLIEIGRYPDAIVALKRAIEIETSYTEAFYYLGYALLK 1242

Query: 422  SSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL----GD 477
            + D   A++AF      L + G   P     N G+   +   FE A +SF  +L    G+
Sbjct: 1243 TGDYTGAIEAFDRN---LTRDGSNAPGHF--NRGIALEKSRRFEEALESFDKSLIYDPGN 1297

Query: 478  GIWLTLLDSKTKTYVI---DASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARL 534
             +       K K Y      A A+    K +QL  R+ +    + +        +NL + 
Sbjct: 1298 ALAFY---HKGKVYADLGRHADAAFAFDKTLQLKPRYTDARLRMGI------AEYNLGKF 1348

Query: 535  LEQIHD 540
            +E IHD
Sbjct: 1349 IESIHD 1354



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 83/324 (25%), Positives = 138/324 (42%), Gaps = 26/324 (8%)

Query: 110 FILATQYYNK-----ASRIDMHEPS---TWVGKGQLLLAKGEVEQASSAFK--IVLEADR 159
           FIL+ Q  N+     A +    EP     W  +G  L   G  ++A  A +    +  D 
Sbjct: 218 FILSKQDQNEFAAQSAEKFLAQEPDHADIWAIRGMSLFKLGRYDEALDALRQATAINPDL 277

Query: 160 DNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQA 219
            +    LG A VE  +  + D++E + R L++HP   GA+    GL  Y+L Q  +A Q 
Sbjct: 278 SDAWYYLGLAGVETRQ--FDDAVEAFTRNLEIHPGNAGAL-FHRGLAHYRLKQYREAVQD 334

Query: 220 FQRALQLDPENVEALV--ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANH 277
           F   L+ +P N EA     +A ++L   E A     +E   R   +    A +L +    
Sbjct: 335 FDSTLEPEPGNKEAWYRRGIACVNLSRYEEA-----LESFNRRLGLGQNHAGSLYFRGIA 389

Query: 278 FFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINK 337
               G++    +  + AL V    P+ + + +    +Y S G + +A   Y  +++    
Sbjct: 390 QARLGRNKEAIESFDAALQVD---PSCASAAFQQGVAYASLGRFSEAVASYDRALRINPG 446

Query: 338 PHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQE 397
             + I   Y  G    KLG    A+  FE+ +   P N +     G   V++G+ ++A E
Sbjct: 447 LSDAI---YHKGFALSKLGRTEDAVQEFERTVAFDPKNAKAFHQKGLQLVKIGRFDEAIE 503

Query: 398 LLRKAAKIDPRDAQAFIDLGELLI 421
              ++  + P  AQA  D G  LI
Sbjct: 504 AFDESLALKPGFAQAAFDKGAALI 527



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 68/288 (23%), Positives = 128/288 (44%), Gaps = 13/288 (4%)

Query: 134  KGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHP 193
            KG+ L+A G    A++AF   ++ +     AL G+   E  +G Y  ++    RAL++ P
Sbjct: 3786 KGRALIALGNHAGATAAFDRAIDINPSCWQALAGKGRAETYQGNYDGAITALDRALEIMP 3845

Query: 194  SCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDP-ENVEALVALAVMDLQANEAAGIRK 252
                 +    GL    L Q   A Q++ RAL+++P   V A   +A+ +L        R 
Sbjct: 3846 K-KAILHDQKGLAYAALEQYRDAVQSYDRALEIEPLPRVFAHKGIALAELGM-----YRD 3899

Query: 253  GMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLA 312
             +E   +A E     A A     N  +  G++   E+  E  LA+    P  + ++    
Sbjct: 3900 AIEAFDKAIEHDGNLAEAWMGKGNVQYDLGKYADAEKAYERGLALD---PENAEAWTRQG 3956

Query: 313  RSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIY 372
                ++  +E+A  +Y  ++  +  P  F   Y+  G   + +  ++ A+  F+ +L I 
Sbjct: 3957 MVLSAQQKFEEALEHYDRAL--MIDP-TFSIAYFTRGSALIAMKRYQEAVEAFDAMLHIQ 4013

Query: 373  PDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 420
            PD  +     G    +L   + A  + ++A +IDP   + + D+G++L
Sbjct: 4014 PDFVDAYIHKGRALQELELYQDALAVFKRALEIDPTRKECWNDIGDIL 4061



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 117/557 (21%), Positives = 215/557 (38%), Gaps = 82/557 (14%)

Query: 108  EHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLG 167
            E +  A Q ++ A +I  +    W GKG  L A G  + A S F   L  D  +  A   
Sbjct: 3488 EQYDEAIQAFDLALKIRPNHAHLWTGKGIALSALGRDQDAVSFFTKALGIDSRDARAAYQ 3547

Query: 168  QACVEFNRGRYSDSLEFYKRALQVHPSCPGA--------IRLGI---------------- 203
                     +Y +++ + + AL   P+C  A          LG+                
Sbjct: 3548 LGVSYLKLSKYHEAIRYLEGALAQQPACVEANYQKGRALAMLGMHNDAITAYDKAIAGKE 3607

Query: 204  ---------GLCRYKLGQLGKARQAFQRALQLDPENVEALV--ALAVMDLQANEAAGIRK 252
                     G+ +  L Q  +A   +  AL L P+   A +   +A++ L  ++ A    
Sbjct: 3608 NFAEAWLYRGISQASLDQYDRAILDYDHALGLRPDYAPAHLFRGIALIHLSRHDQA---- 3663

Query: 253  GMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLA 312
             +E    A  + P    AL       F+ G   L ++L   A+ V +     ++ Y   A
Sbjct: 3664 -VEAFNHALTVEPEYPEAL-------FYKGLALLEQELYTEAIPVFDQALAANNRY---A 3712

Query: 313  RSYHSKG-------DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNF 365
             ++H+KG        +E+A   + A++   +   E +F     G+  +  G FR A+ +F
Sbjct: 3713 EAWHNKGVALARTGQHEEAIAAFNAALGIRSDYAEALFER---GRSLVHTGMFREAIASF 3769

Query: 366  EKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDT 425
            ++VL + P N       G   + LG    A     +A  I+P   QA    G        
Sbjct: 3770 DQVLILAPGNANAHFEKGRALIALGNHAGATAAFDRAIDINPSCWQALAGKGRAETYQGN 3829

Query: 426  GAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLD 485
                  +  A T L +A     +E++    ++H +KG   +A + ++DA+        ++
Sbjct: 3830 ------YDGAITALDRA-----LEIMPKKAILHDQKGLAYAALEQYRDAVQSYDRALEIE 3878

Query: 486  SKTKTYVID--ASASMLQFKD-MQLFHR-FENDGNHVELPWNKVTVLFNLARLLEQIHDT 541
               + +     A A +  ++D ++ F +  E+DGN  E    K  V ++L +  +     
Sbjct: 3879 PLPRVFAHKGIALAELGMYRDAIEAFDKAIEHDGNLAEAWMGKGNVQYDLGKYAD----- 3933

Query: 542  VAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGD 601
              A   Y   L    +  +A+ R   +  A+   + ++E  + AL ++  +  A    G 
Sbjct: 3934 --AEKAYERGLALDPENAEAWTRQGMVLSAQQKFEEALEHYDRALMIDPTFSIAYFTRGS 3991

Query: 602  LELKNDDWVKAKETFRA 618
              +    + +A E F A
Sbjct: 3992 ALIAMKRYQEAVEAFDA 4008



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 72/309 (23%), Positives = 123/309 (39%), Gaps = 18/309 (5%)

Query: 113  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
            A   Y++A  I+      W+ KG  L   G+ E A  A+   L+ D DN P  + Q    
Sbjct: 1045 AVGAYSRALEINPALCDIWMRKGDALQQLGKTEDAILAYGKSLKIDPDNEPGWIRQGKAF 1104

Query: 173  FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 232
            F+  RY D+++ +  A+ ++     A     GL   K+ +   A   F+  L++DP+N +
Sbjct: 1105 FDLTRYQDAIDAFDNAISLNQRSIEAFWYK-GLALEKVNRHEGAIHVFEILLEIDPKNGD 1163

Query: 233  AL----VALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVE 288
            A     +ALAV+          R  +    +  +I P  A A           G++    
Sbjct: 1164 AQFHKGLALAVL-------GDHRDAIGSFDKTLQILPDSAPAWYNKGKSLIEIGRYPDAI 1216

Query: 289  QLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGL 348
               + A+ +     + + ++Y L  +    GDY  A     A  + + +       ++  
Sbjct: 1217 VALKRAIEIET---SYTEAFYYLGYALLKTGDYTGA---IEAFDRNLTRDGSNAPGHFNR 1270

Query: 349  GQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPR 408
            G    K   F  AL +F+K L   P N       G +Y  LG+   A     K  ++ PR
Sbjct: 1271 GIALEKSRRFEEALESFDKSLIYDPGNALAFYHKGKVYADLGRHADAAFAFDKTLQLKPR 1330

Query: 409  DAQAFIDLG 417
               A + +G
Sbjct: 1331 YTDARLRMG 1339



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 73/318 (22%), Positives = 123/318 (38%), Gaps = 50/318 (15%)

Query: 117 YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 176
           Y+ A  I+  +P+ W  K   L   G+ E+A  A   +L    DN  A + +    +  G
Sbjct: 63  YDMAVSIEPSDPNAWYNKAATLAQVGKNEEALEACDRLLAIRYDNAEAWILKGIALYELG 122

Query: 177 RYSDSLEFYKRALQVHPS-------------------------------CPGAIR--LGI 203
           R++D++  Y  AL + P                                 PG  R     
Sbjct: 123 RFTDAISAYDHALMIDPRHAKVYYNKGIALADLGRHQEAIYSYNKAIEIVPGYARAYYNK 182

Query: 204 GLCRYKLGQLGKARQAFQRALQLDPENVEAL----VALAVMDLQANEAAGIRKGMEKMQR 259
           G+  Y+LG L  A  AF RA +LDP+++         L+  D     A    K + +   
Sbjct: 183 GISLYELGNLDDALSAFNRAAELDPDDIWVWYYRSFILSKQDQNEFAAQSAEKFLAQEPD 242

Query: 260 AFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 319
             +I+    M+L       F  G++   ++  +     T   P  S ++Y L  +     
Sbjct: 243 HADIWAIRGMSL-------FKLGRY---DEALDALRQATAINPDLSDAWYYLGLAGVETR 292

Query: 320 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 379
            ++ A   +  ++ EI+  +     + GL   +LK   +R A+ +F+  LE  P N E  
Sbjct: 293 QFDDAVEAFTRNL-EIHPGNAGALFHRGLAHYRLK--QYREAVQDFDSTLEPEPGNKEAW 349

Query: 380 KALGHIYVQLGQIEKAQE 397
              G   V L + E+A E
Sbjct: 350 YRRGIACVNLSRYEEALE 367



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 83/361 (22%), Positives = 138/361 (38%), Gaps = 41/361 (11%)

Query: 117  YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 176
            Y++A  +   +P     KG  L  +   ++A  AF+  L  + +N             R 
Sbjct: 777  YDQALELSPDDPKILYQKGMALTQRERFDEAIRAFESALALEPENASGAYYLGVAYAGRE 836

Query: 177  RYSDSLEFYKRALQVHPSCPGAIRL-GIGLCRYKLGQLGKARQAFQRALQLDPENVEALV 235
            RY D++  +  A+ + P+   A    GI L + +  +  +A  AF  AL+ DP+N     
Sbjct: 837  RYDDAIRAFDNAIALDPTQGQAFHFKGIALVQRE--RYTEAITAFLSALKRDPDNPVTHY 894

Query: 236  ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETAL 295
             L +  LQ  +    +  + +  RA E+ P    A  Y        G+H     L + +L
Sbjct: 895  YLGLAYLQDKQ---FKNAIPEFSRATELDPSLLDAYLYHGIALAAIGRHDEAVPLFDKSL 951

Query: 296  AVTNHGPTKSHSYYNLARS---------------------------YHSKGDYEKAGLYY 328
            A     PT   +    ARS                           +  KGD   + L  
Sbjct: 952  AGN---PTHIDAMTARARSLMVLERFSEVVETDDRILSLNPTLIDTWMQKGDALASQLLK 1008

Query: 329  MASVKEINKPHE----FIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGH 384
              ++   +K  E    F   +   G   + L   + A+  + + LEI P  C+     G 
Sbjct: 1009 QEAIGAYSKALEINSGFAEAWIRKGNALMDLNKVQDAVGAYSRALEINPALCDIWMRKGD 1068

Query: 385  IYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAG 443
               QLG+ E A     K+ KIDP +   +I  G+     +    A+DAF  A +L +++ 
Sbjct: 1069 ALQQLGKTEDAILAYGKSLKIDPDNEPGWIRQGKAFFDLTRYQDAIDAFDNAISLNQRSI 1128

Query: 444  E 444
            E
Sbjct: 1129 E 1129



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 75/317 (23%), Positives = 121/317 (38%), Gaps = 11/317 (3%)

Query: 106  KEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPAL 165
            ++E +  A   +++A   +      W  KG  L   G+ E+A +AF   L    D   AL
Sbjct: 3690 EQELYTEAIPVFDQALAANNRYAEAWHNKGVALARTGQHEEAIAAFNAALGIRSDYAEAL 3749

Query: 166  LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 225
              +     + G + +++  + + L + P    A     G     LG    A  AF RA+ 
Sbjct: 3750 FERGRSLVHTGMFREAIASFDQVLILAPGNANA-HFEKGRALIALGNHAGATAAFDRAID 3808

Query: 226  LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 285
            ++P   +AL      +       G    +  + RA EI P  A+  +     +    Q+ 
Sbjct: 3809 INPSCWQALAGKGRAETYQGNYDG---AITALDRALEIMPKKAILHDQKGLAYAALEQYR 3865

Query: 286  LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 345
               Q  + AL +       +H    LA      G Y  A     A  K I         +
Sbjct: 3866 DAVQSYDRALEIEPLPRVFAHKGIALA----ELGMYRDA---IEAFDKAIEHDGNLAEAW 3918

Query: 346  YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKI 405
             G G VQ  LG +  A   +E+ L + P+N E     G +     + E+A E   +A  I
Sbjct: 3919 MGKGNVQYDLGKYADAEKAYERGLALDPENAEAWTRQGMVLSAQQKFEEALEHYDRALMI 3978

Query: 406  DPRDAQAFIDLGELLIS 422
            DP  + A+   G  LI+
Sbjct: 3979 DPTFSIAYFTRGSALIA 3995



 Score = 56.2 bits (134), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 74/310 (23%), Positives = 123/310 (39%), Gaps = 28/310 (9%)

Query: 117  YNKASRID-MHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNR 175
            YN+A  +  MH PS    KG  L+     E+A   F   LE D     A+  +       
Sbjct: 3225 YNRALALQPMHVPSLHR-KGVALIRLERYEEAIKVFDRALEIDPACADAIYDKGRALSAL 3283

Query: 176  GRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEAL- 234
            G Y ++++ Y + L +  +    +    G+    LG+   A  AF +AL LDP N +A  
Sbjct: 3284 GMYREAVKTYDKLLGID-AGNAEVSYDKGIALAHLGRHDDAIVAFNKALDLDPGNAQAAY 3342

Query: 235  ---VALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLT 291
               ++LA      +        +E   R  E  P       +     F  G++    +  
Sbjct: 3343 HKGLSLATTGRHPD-------AIEAFDRVIEREPGSVEGWVHRGLSLFALGKYNDAVESY 3395

Query: 292  ETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEF----IFPYYG 347
              A+A+    P+ + ++Y    +  + G YE A       ++  NK  EF    +  Y  
Sbjct: 3396 VRAIAID---PSNAEAWYFKGSAIFASGGYEDA-------IEAFNKALEFRPDYVSAYND 3445

Query: 348  LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 407
             G+    +G FR A+  F+  L +   N + L   G   ++L Q ++A +    A KI P
Sbjct: 3446 KGRSLFHMGMFREAVIAFDNALALQQKNVDALYHKGTSLLRLEQYDEAIQAFDLALKIRP 3505

Query: 408  RDAQAFIDLG 417
              A  +   G
Sbjct: 3506 NHAHLWTGKG 3515



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 95/397 (23%), Positives = 158/397 (39%), Gaps = 48/397 (12%)

Query: 113  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
            A + ++KA  ++  +P  W  K   L   G  E+A  AF  VL    D+  A LG+    
Sbjct: 3017 AVRSFDKALALNETDPDIWYHKAISLAHLGRAEEAVPAFDKVLGLRPDDAEAFLGRGRAY 3076

Query: 173  FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 232
            +    +  ++E + R +   P    A     G+  Y LG+  +A  AF + L+ D  N +
Sbjct: 3077 YTLKSFDRAIESFDRVIGYLPQHAAAWHEK-GMALYDLGRYEEAIAAFDKTLEEDGGNHD 3135

Query: 233  ALVALAVMDLQANEAAGIRKGMEKMQRAFEI-----------YPYCAMALNYLANH---- 277
            AL   A+        A I K  E ++ +FE+           +    +AL+ L  H    
Sbjct: 3136 ALYYCALA------YAAIGKDAEAVE-SFELLLTRAPDNATAWYENGLALSRLKRHKDAI 3188

Query: 278  ------FFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLA--------RSYHSKGDYEK 323
                        +F   ++   +       P ++   YN A         S H KG    
Sbjct: 3189 HAFDQAIRVRPDYFDAHEVRARSFDSLGD-PKETIDAYNRALALQPMHVPSLHRKGVALI 3247

Query: 324  AGLYYMASVKEINKPHEFIFP-----YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCET 378
                Y  ++K  ++  E I P      Y  G+    LG +R A+  ++K+L I   N E 
Sbjct: 3248 RLERYEEAIKVFDRALE-IDPACADAIYDKGRALSALGMYREAVKTYDKLLGIDAGNAEV 3306

Query: 379  LKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTL 438
                G     LG+ + A     KA  +DP +AQA    G  L  + TG   DA +    +
Sbjct: 3307 SYDKGIALAHLGRHDDAIVAFNKALDLDPGNAQAAYHKG--LSLATTGRHPDAIEAFDRV 3364

Query: 439  LKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
            +++  E   +E   + G+  F  G++  A +S+  A+
Sbjct: 3365 IER--EPGSVEGWVHRGLSLFALGKYNDAVESYVRAI 3399



 Score = 52.8 bits (125), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 85/377 (22%), Positives = 161/377 (42%), Gaps = 24/377 (6%)

Query: 108  EHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLG 167
            E F  A   ++ A  ID  +      KG  L A G  ++A +AF   L  D DN  AL  
Sbjct: 1652 ESFEDAIGAFDAALAIDAQKTEYPYQKGLALAALGRHDEAEAAFSAALARDPDNQDALYH 1711

Query: 168  QACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLD 227
            +       GR+S+++E   + ++ +P    A  L  G C + + +   A  ++ +AL+L+
Sbjct: 1712 KGLSLAELGRFSEAIEDLAKTVERNPKIANAW-LIQGFCLFAVERYSDALASYDKALELE 1770

Query: 228  PENVEALV--ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 285
             +N           ++L  +  A +       ++A +I P    A  Y+    F   +  
Sbjct: 1771 TQNPHTWFYKGRTCLNLGNDSDAVL-----AFEQAIKIVPDFGEAFYYMGQALFRQKK-- 1823

Query: 286  LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEI--NKPHEFIF 343
             + +            P  + ++    R++ + G Y +A     A+ +++   +P + + 
Sbjct: 1824 -LAEAAVAFEEANRLMPDFTEAFQEKGRTFFALGRYREAA----AAFEQVLAMQPRD-LN 1877

Query: 344  PYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAA 403
              YGL +   +LG  + A+  + KV  I PD        G  ++Q+ + E A     +  
Sbjct: 1878 ATYGLARSLDRLGSAKEAIPAYAKVNRIAPDCERAFLYRGFAHLQVREYEDAVAAFTRVV 1937

Query: 404  KIDPRDAQAFIDLGELLISSDTGA-ALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKG 462
            +I+P +  A+ + G+ L+  +  A AL+AF     L +K  + V   +L   G+   +  
Sbjct: 1938 EINPANTDAWHEKGKALVVLEKYAKALEAFDG--YLGQKPDDPV---ILCQKGLSLVKLD 1992

Query: 463  EFESAHQSFKDALGDGI 479
             FE A  +F  A+  G+
Sbjct: 1993 RFEDALAAFTSAIDKGM 2009



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 110/449 (24%), Positives = 165/449 (36%), Gaps = 70/449 (15%)

Query: 134  KGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHP 193
            KG  L   G   +A       +E +     A L Q    F   RYSD+L  Y +AL++  
Sbjct: 1712 KGLSLAELGRFSEAIEDLAKTVERNPKIANAWLIQGFCLFAVERYSDALASYDKALELET 1771

Query: 194  SCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKG 253
              P         C   LG    A  AF++A+++ P+  EA   +     +  + A     
Sbjct: 1772 QNPHTWFYKGRTC-LNLGNDSDAVLAFEQAIKIVPDFGEAFYYMGQALFRQKKLAEAAVA 1830

Query: 254  MEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLAR 313
             E+  R   + P    A       FF  G++       E  LA+    P   ++ Y LAR
Sbjct: 1831 FEEANR---LMPDFTEAFQEKGRTFFALGRYREAAAAFEQVLAMQ---PRDLNATYGLAR 1884

Query: 314  SYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYP 373
            S    G  ++A   Y A V  I    E  F Y G   +Q++  ++  A+  F +V+EI P
Sbjct: 1885 SLDRLGSAKEAIPAY-AKVNRIAPDCERAFLYRGFAHLQVR--EYEDAVAAFTRVVEINP 1941

Query: 374  DNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRD------------------------ 409
             N +     G   V L +  KA E         P D                        
Sbjct: 1942 ANTDAWHEKGKALVVLEKYAKALEAFDGYLGQKPDDPVILCQKGLSLVKLDRFEDALAAF 2001

Query: 410  -----------------AQAFIDLG---ELLISSDTGAALDAFKTARTLLKKAGEEVPIE 449
                             A  F+ LG   E++ S+D   ALD+ +T R LL K GE +   
Sbjct: 2002 TSAIDKGMNTPGVHTEQALCFLKLGRDEEVIRSADRALALDSSET-RALLAK-GESLARL 2059

Query: 450  VLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFH 509
              +   V  F+ G      ++ +   G G+ L  L  + +  VI            +L H
Sbjct: 2060 GRHEEAVAAFD-GVIARDAENDRARRGRGVSLVQL-GRYEDAVI------------ELDH 2105

Query: 510  RFENDGNHVELPWNKVTVLFNLARLLEQI 538
              END  + +L   K   L+ LAR  E +
Sbjct: 2106 ALENDATNADLLTCKGYSLYRLARYKETV 2134



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 52/183 (28%), Positives = 78/183 (42%), Gaps = 23/183 (12%)

Query: 70   EIDEYYADVRYERIAILNALGVY------YTYLGKIETKQRE-------------KEEHF 110
            EID   AD  Y++   L+ALG+Y      Y  L  I+    E             + +  
Sbjct: 3264 EIDPACADAIYDKGRALSALGMYREAVKTYDKLLGIDAGNAEVSYDKGIALAHLGRHDDA 3323

Query: 111  ILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQAC 170
            I+A   +NKA  +D         KG  L   G    A  AF  V+E +  +V   + +  
Sbjct: 3324 IVA---FNKALDLDPGNAQAAYHKGLSLATTGRHPDAIEAFDRVIEREPGSVEGWVHRGL 3380

Query: 171  VEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPEN 230
              F  G+Y+D++E Y RA+ + PS   A     G   +  G    A +AF +AL+  P+ 
Sbjct: 3381 SLFALGKYNDAVESYVRAIAIDPSNAEAWYFK-GSAIFASGGYEDAIEAFNKALEFRPDY 3439

Query: 231  VEA 233
            V A
Sbjct: 3440 VSA 3442



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 90/397 (22%), Positives = 159/397 (40%), Gaps = 56/397 (14%)

Query: 117 YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 176
           YNKA  I       +  KG  L   G ++ A SAF    E D D++     ++ +   + 
Sbjct: 165 YNKAIEIVPGYARAYYNKGISLYELGNLDDALSAFNRAAELDPDDIWVWYYRSFILSKQD 224

Query: 177 RYSDSLEFYKRALQVHPSCPG--AIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEAL 234
           +   + +  ++ L   P      AIR   G+  +KLG+  +A  A ++A  ++P+  +A 
Sbjct: 225 QNEFAAQSAEKFLAQEPDHADIWAIR---GMSLFKLGRYDEALDALRQATAINPDLSDAW 281

Query: 235 VALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTG-QHFLVEQLTET 293
             L +  ++  +       +E   R  EI+P  A AL       F  G  H+ ++Q  E 
Sbjct: 282 YYLGLAGVETRQ---FDDAVEAFTRNLEIHPGNAGAL-------FHRGLAHYRLKQYREA 331

Query: 294 AL---AVTNHGPTKSHSYY-------NLAR------SYHSK---GDYEKAGLYYMASVK- 333
                +     P    ++Y       NL+R      S++ +   G      LY+    + 
Sbjct: 332 VQDFDSTLEPEPGNKEAWYRRGIACVNLSRYEEALESFNRRLGLGQNHAGSLYFRGIAQA 391

Query: 334 EINKPHEFIFPYYGLGQVQ--------------LKLGDFRSALTNFEKVLEIYPDNCETL 379
            + +  E I  +    QV                 LG F  A+ ++++ L I P   + +
Sbjct: 392 RLGRNKEAIESFDAALQVDPSCASAAFQQGVAYASLGRFSEAVASYDRALRINPGLSDAI 451

Query: 380 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG-ELLISSDTGAALDAFKTARTL 438
              G    +LG+ E A +   +    DP++A+AF   G +L+       A++AF  +  L
Sbjct: 452 YHKGFALSKLGRTEDAVQEFERTVAFDPKNAKAFHQKGLQLVKIGRFDEAIEAFDESLAL 511

Query: 439 LKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
             K G     +   + G      G+FE A Q+F  A+
Sbjct: 512 --KPGF---AQAAFDKGAALIRLGKFEDALQAFDQAI 543



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 55/226 (24%), Positives = 95/226 (42%), Gaps = 54/226 (23%)

Query: 176  GRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV 235
            G Y D++E + +A++ H        +G G  +Y LG+   A +A++R L LDPEN EA  
Sbjct: 3895 GMYRDAIEAFDKAIE-HDGNLAEAWMGKGNVQYDLGKYADAEKAYERGLALDPENAEAWT 3953

Query: 236  ALAVMDLQANEAAGIRKGM-----EKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQL 290
                           R+GM     +K + A E Y                          
Sbjct: 3954 ---------------RQGMVLSAQQKFEEALEHY-------------------------- 3972

Query: 291  TETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQ 350
             + AL +    PT S +Y+    +  +   Y++A   + A    ++   +F+  Y   G+
Sbjct: 3973 -DRALMID---PTFSIAYFTRGSALIAMKRYQEAVEAFDAM---LHIQPDFVDAYIHKGR 4025

Query: 351  VQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQ 396
               +L  ++ AL  F++ LEI P   E    +G I  ++G+ E+A+
Sbjct: 4026 ALQELELYQDALAVFKRALEIDPTRKECWNDIGDILDRIGKHEEAR 4071



 Score = 49.3 bits (116), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 71/313 (22%), Positives = 124/313 (39%), Gaps = 50/313 (15%)

Query: 108 EHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLG 167
           E F  A   + +A+ ID     +   +G  L       +A  AF  VL    +N  A   
Sbjct: 564 ERFSDAITAFEQAAVIDPTHTLSLYHRGLTLGKLKRFMEAVVAFDAVLAISPENTNARYE 623

Query: 168 QACVEFNRGRYSDSLEFYKRALQVHPS-CPGAIRLGIGLCRYKLGQLGKARQAFQRALQL 226
           +    F+  RY+++++ +  AL+ +P+   G + +GI L    +G L +A  AF +A+ L
Sbjct: 624 KGIALFHLLRYAEAVQEFHEALEQNPALVNGWLYMGISLAH--IGHLEEALPAFNKAIAL 681

Query: 227 DPENVEALV--ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQH 284
           +P+  EA V   + +  L+ +E A         + A ++Y +C   L   A         
Sbjct: 682 NPKLAEAYVRKGIVLFTLERHEEAVSTLNRALDENAKDVYGWCYKGLALSA--------- 732

Query: 285 FLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFP 344
                                     L R   +   ++KA         EIN+     F 
Sbjct: 733 --------------------------LGRFDEAVRSFDKA--------LEINRRCARAF- 757

Query: 345 YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAK 404
            +  G   LKLG    A+ ++++ LE+ PD+ + L   G    Q  + ++A      A  
Sbjct: 758 -FERGNALLKLGKPLEAVVSYDQALELSPDDPKILYQKGMALTQRERFDEAIRAFESALA 816

Query: 405 IDPRDAQAFIDLG 417
           ++P +A     LG
Sbjct: 817 LEPENASGAYYLG 829



 Score = 48.5 bits (114), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 77/341 (22%), Positives = 131/341 (38%), Gaps = 40/341 (11%)

Query: 113  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
            AT+ + K S +D        G+GQ L      E+A +AF   LE D     A   + C  
Sbjct: 2337 ATEAFEKTSALDATSVPAAFGRGQSLAELDRDEEAIAAFTRTLELDSTQAEAAYLRGCAY 2396

Query: 173  FNRGRYSDSLEFYKRALQVHPS-CPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENV 231
                 Y++++  +   +Q  P       R G+ L     G+  KA +++++AL  D    
Sbjct: 2397 LRLALYTEAISSFDYTIQYAPDHAQSHYRRGLAL--QAQGKYEKAIRSYKQALTHDGSIT 2454

Query: 232  EAL--VALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQ 289
            +A+    L    L  N+ A     ++   R  E  P  A  L + +   F   ++     
Sbjct: 2455 DAVYQTGLCYAALNKNDQA-----LKTFDRVLETLPERADILFHKSRALFRLMRYEEALT 2509

Query: 290  LTETALAVTNHGPT----KSHSYYNLARSYHSKGDYEKA--------GLYYMA--SVKEI 335
              + +LA+ N+       K  + Y L R   S   Y+++          +Y+   S+ ++
Sbjct: 2510 AIDASLAIENNDVAVWEQKGSTLYELGRFEESLEAYDRSLALNPDSITCWYLKGRSLSDL 2569

Query: 336  NKPHEFIFPYYGL---------------GQVQLKLGDFRSALTNFEKVLEIYPDNCETLK 380
             +  E I P +                 G   L LG F  A+    + L++ PDN     
Sbjct: 2570 ARYEEAI-PCFDRVIETDETCAGAWLRKGSSLLSLGKFAPAIEALTRSLDLQPDNANGWY 2628

Query: 381  ALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLI 421
              G    +L Q E A     +A  I+ + A A+ D G  L+
Sbjct: 2629 DRGIALAELKQYEDAVASYDRAIAINRKYANAWYDKGVALV 2669



 Score = 47.4 bits (111), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 47/175 (26%), Positives = 79/175 (45%), Gaps = 10/175 (5%)

Query: 113  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
            A + ++KA   D +    W+GKG +    G+   A  A++  L  D +N  A   Q  V 
Sbjct: 3900 AIEAFDKAIEHDGNLAEAWMGKGNVQYDLGKYADAEKAYERGLALDPENAEAWTRQGMVL 3959

Query: 173  FNRGRYSDSLEFYKRALQVHPSCPGA-IRLGIGLCRYKLGQLGKARQAFQRALQLDPENV 231
              + ++ ++LE Y RAL + P+   A    G  L   K  Q  +A +AF   L + P+ V
Sbjct: 3960 SAQQKFEEALEHYDRALMIDPTFSIAYFTRGSALIAMKRYQ--EAVEAFDAMLHIQPDFV 4017

Query: 232  EALV--ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQH 284
            +A +    A+ +L+  + A     +   +RA EI P      N + +     G+H
Sbjct: 4018 DAYIHKGRALQELELYQDA-----LAVFKRALEIDPTRKECWNDIGDILDRIGKH 4067



 Score = 47.0 bits (110), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 128/534 (23%), Positives = 199/534 (37%), Gaps = 71/534 (13%)

Query: 129  STWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRA 188
            + W  KG  L   G  E+A +AF   LE D  N  AL   A      G+ ++++E ++  
Sbjct: 3101 AAWHEKGMALYDLGRYEEAIAAFDKTLEEDGGNHDALYYCALAYAAIGKDAEAVESFELL 3160

Query: 189  LQVHPSCPGA-IRLGIGLCRYK--------------------------------LGQLGK 215
            L   P    A    G+ L R K                                LG   +
Sbjct: 3161 LTRAPDNATAWYENGLALSRLKRHKDAIHAFDQAIRVRPDYFDAHEVRARSFDSLGDPKE 3220

Query: 216  ARQAFQRALQLDPENVEAL--VALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNY 273
               A+ RAL L P +V +L    +A++ L+  E A     ++   RA EI P CA A+  
Sbjct: 3221 TIDAYNRALALQPMHVPSLHRKGVALIRLERYEEA-----IKVFDRALEIDPACADAIYD 3275

Query: 274  LANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK 333
                    G +    +  +  L +       S   Y+   +    G ++ A    +A  K
Sbjct: 3276 KGRALSALGMYREAVKTYDKLLGIDAGNAEVS---YDKGIALAHLGRHDDA---IVAFNK 3329

Query: 334  EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIE 393
             ++         Y  G      G    A+  F++V+E  P + E     G     LG+  
Sbjct: 3330 ALDLDPGNAQAAYHKGLSLATTGRHPDAIEAFDRVIEREPGSVEGWVHRGLSLFALGKYN 3389

Query: 394  KAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP--IEVL 451
             A E   +A  IDP +A+A+   G  + +S  G   DA +       KA E  P  +   
Sbjct: 3390 DAVESYVRAIAIDPSNAEAWYFKGSAIFAS--GGYEDAIEA----FNKALEFRPDYVSAY 3443

Query: 452  NNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKD----MQL 507
            N+ G   F  G F  A  +F +AL        L  K    +     S+L+ +     +Q 
Sbjct: 3444 NDKGRSLFHMGMFREAVIAFDNALA-------LQQKNVDALYHKGTSLLRLEQYDEAIQA 3496

Query: 508  FH-RFENDGNHVELPWNKVTVLFNLARLLEQIH-DTVAASVLYRLILFKYQDYVDAYLRL 565
            F    +   NH  L   K   L  L R  + +   T A  +  R     YQ  V +YL+L
Sbjct: 3497 FDLALKIRPNHAHLWTGKGIALSALGRDQDAVSFFTKALGIDSRDARAAYQLGV-SYLKL 3555

Query: 566  AAIAKARNNLQLSIELVNEALKVNGKYPNALSMLG---DLELKNDDWVKAKETF 616
            +   +A   L+ ++      ++ N +   AL+MLG   D     D  +  KE F
Sbjct: 3556 SKYHEAIRYLEGALAQQPACVEANYQKGRALAMLGMHNDAITAYDKAIAGKENF 3609



 Score = 44.7 bits (104), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 72/320 (22%), Positives = 117/320 (36%), Gaps = 36/320 (11%)

Query: 123  IDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALL--GQACVEFNRGRYSD 180
            ID         KG  L   G+   A  +F   L+   D+ PA    G++ +E   GRY D
Sbjct: 1157 IDPKNGDAQFHKGLALAVLGDHRDAIGSFDKTLQILPDSAPAWYNKGKSLIEI--GRYPD 1214

Query: 181  SLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVM 240
            ++   KRA+++  S   A    +G    K G    A +AF R L  D  N        + 
Sbjct: 1215 AIVALKRAIEIETSYTEAFYY-LGYALLKTGDYTGAIEAFDRNLTRDGSNAPGHFNRGIA 1273

Query: 241  DLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQH----FLVEQLTETALA 296
                 ++    + +E   ++    P  A+A  +    +   G+H    F  ++  +    
Sbjct: 1274 ---LEKSRRFEEALESFDKSLIYDPGNALAFYHKGKVYADLGRHADAAFAFDKTLQLKPR 1330

Query: 297  VTNHGPTKSHSYYNLARSYHSKGDYEKA---------GLYYMASVKEINKPHEFIFPYYG 347
             T+       + YNL +   S  D++K            YY A      K HE     Y 
Sbjct: 1331 YTDARLRMGIAEYNLGKFIESIHDFDKTIAENANSSQAHYYKARALADLKRHEEAVGAYD 1390

Query: 348  L---------------GQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQI 392
            L               G   ++L  F  A+  FE+   + P N       G   V+L + 
Sbjct: 1391 LALRLDPDTADIHYYKGFSLMELAQFEKAIPEFERTEVLTPANAMAFYQHGLALVRLERE 1450

Query: 393  EKAQELLRKAAKIDPRDAQA 412
              A ++L ++  + PR A A
Sbjct: 1451 NDAIQVLDQSIALSPRYAPA 1470



 Score = 42.7 bits (99), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 86/384 (22%), Positives = 149/384 (38%), Gaps = 42/384 (10%)

Query: 61   QILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKA 120
            Q+L++  S  +   YA  +Y+R   LN+LG Y   L   +       +    A Q     
Sbjct: 1455 QVLDQ--SIALSPRYAPAQYQRGLALNSLGRYRESLESFDGALSADPQLADAALQKAIAL 1512

Query: 121  SRIDMHEPS----------------TWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPA 164
            + +  H  +                 W  KG  L     V +A +AF   +E D  N  +
Sbjct: 1513 ASLGRHADALGAADVAIAIRPELAQAWHRKGTALAELDRVPEALAAFDRAIEIDPANARS 1572

Query: 165  LLGQACVEFNRGRYSDSLEFYKRALQVHPS-CPGAIRLGIGLCRYKLGQLGKARQAFQRA 223
               +  V    GR+ ++++ + ++L + P+  P     G+ L    +G   +A  +F  A
Sbjct: 1573 HFERGLVLARLGRHIEAIQAFDQSLSLIPNYVPAFYNKGLALM--AVGMHEEAVLSFNIA 1630

Query: 224  LQLDPENVEALV--ALAVMDLQANE-AAGIRKGMEKMQRAFEIYPY-CAMALNYLANHFF 279
            L++ P++   L    LA+M L++ E A G       +      YPY   +AL  L  H  
Sbjct: 1631 LEILPDDPAVLYQKGLALMRLESFEDAIGAFDAALAIDAQKTEYPYQKGLALAALGRH-- 1688

Query: 280  FTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINK-- 337
                    ++      A     P    + Y+   S    G + +A +  +A   E N   
Sbjct: 1689 --------DEAEAAFSAALARDPDNQDALYHKGLSLAELGRFSEA-IEDLAKTVERNPKI 1739

Query: 338  PHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQE 397
             + ++   + L  V+     +  AL +++K LE+   N  T    G   + LG    A  
Sbjct: 1740 ANAWLIQGFCLFAVE----RYSDALASYDKALELETQNPHTWFYKGRTCLNLGNDSDAVL 1795

Query: 398  LLRKAAKIDPRDAQAFIDLGELLI 421
               +A KI P   +AF  +G+ L 
Sbjct: 1796 AFEQAIKIVPDFGEAFYYMGQALF 1819



 Score = 42.0 bits (97), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 76/347 (21%), Positives = 133/347 (38%), Gaps = 38/347 (10%)

Query: 158 DRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKAR 217
           ++ +  ALL Q    ++ GR+ +++  + R L ++P    A     G+  Y LG+   A 
Sbjct: 2   NKSDAEALLRQGIELYDLGRFQEAIVMFDRGLALYPRLAKAHYFK-GIALYDLGKFEDAI 60

Query: 218 QAFQRALQLDPENVEALVALAVMDLQA-------------------NEAAGIRKG----- 253
            A+  A+ ++P +  A    A    Q                    N  A I KG     
Sbjct: 61  AAYDMAVSIEPSDPNAWYNKAATLAQVGKNEEALEACDRLLAIRYDNAEAWILKGIALYE 120

Query: 254 MEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG----PTKSHSYY 309
           + +   A   Y +  M     A  ++  G         + A+   N      P  + +YY
Sbjct: 121 LGRFTDAISAYDHALMIDPRHAKVYYNKGIALADLGRHQEAIYSYNKAIEIVPGYARAYY 180

Query: 310 NLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVL 369
           N   S +  G+ + A L       E++    +++ Y      +    +F  A  + EK L
Sbjct: 181 NKGISLYELGNLDDA-LSAFNRAAELDPDDIWVWYYRSFILSKQDQNEF--AAQSAEKFL 237

Query: 370 EIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAAL 429
              PD+ +     G    +LG+ ++A + LR+A  I+P  + A+  LG  L   +T    
Sbjct: 238 AQEPDHADIWAIRGMSLFKLGRYDEALDALRQATAINPDLSDAWYYLG--LAGVETRQFD 295

Query: 430 DAFKT-ARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
           DA +   R L    G       L + G+ H+   ++  A Q F   L
Sbjct: 296 DAVEAFTRNLEIHPGN---AGALFHRGLAHYRLKQYREAVQDFDSTL 339



 Score = 40.8 bits (94), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 77/360 (21%), Positives = 132/360 (36%), Gaps = 79/360 (21%)

Query: 95   YLGKIETKQREKEEHFIL--------------ATQYYNKASRIDMHEPSTWVGKGQLLLA 140
            YLGK   K+R K+   +L              A   ++K + ID      W  KGQ LLA
Sbjct: 2136 YLGKA-VKRRPKDRTVLLFRGKAFLRLGRWENAYGMFDKLTAIDPKYVKGWYYKGQALLA 2194

Query: 141  KGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSC-PGAI 199
            K   E A  AF+  +  +     A   +     +  R+++++  + RAL++ P     A 
Sbjct: 2195 KDLYEDALLAFETAISLEETCAGAWYNKGRALGSLARHAEAVAAFNRALELQPDMRDAAY 2254

Query: 200  RLGIGL----------------------------CR----YKLGQLGKARQAFQRALQLD 227
            R G+ L                            CR     +L +  +A ++F + + L 
Sbjct: 2255 RKGLALAAQYLHSDAVAAFDSAASLGLDQGELWYCRGTSLMQLARWQEALESFNKTIALV 2314

Query: 228  PEN--------------------VEALVALAVMDLQANEAA-GIRKGMEKMQRAFEIYPY 266
            P+N                     EA    + +D  +  AA G  + + ++ R  E    
Sbjct: 2315 PDNAPAWLNKGLCLQKLNYHAAATEAFEKTSALDATSVPAAFGRGQSLAELDRDEEAIAA 2374

Query: 267  CAMAL---NYLANHFFFTGQHFLVEQLTETALA----VTNHGPTKSHSYYNLARSYHSKG 319
                L   +  A   +  G  +L   L   A++       + P  + S+Y    +  ++G
Sbjct: 2375 FTRTLELDSTQAEAAYLRGCAYLRLALYTEAISSFDYTIQYAPDHAQSHYRRGLALQAQG 2434

Query: 320  DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 379
             YEKA   Y  ++       + ++   GL    L   D   AL  F++VLE  P+  + L
Sbjct: 2435 KYEKAIRSYKQALTHDGSITDAVYQ-TGLCYAALNKND--QALKTFDRVLETLPERADIL 2491


>gi|196018127|ref|XP_002118739.1| hypothetical protein TRIADDRAFT_62755 [Trichoplax adhaerens]
 gi|190578324|gb|EDV18775.1| hypothetical protein TRIADDRAFT_62755 [Trichoplax adhaerens]
          Length = 873

 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 96/437 (21%), Positives = 180/437 (41%), Gaps = 83/437 (18%)

Query: 87  NALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDM-----HEPS---TWVGKGQLL 138
           N +G+ Y + GK +            A   YNK+ +I +     + PS   T+   G + 
Sbjct: 228 NNIGLVYYHQGKYDD-----------ALSMYNKSLKIKLTQLGDNHPSIADTYNNIGLVY 276

Query: 139 LAKGEVEQASSAF----KIVLEADRDNVPALLGQ----ACVEFNRGRYSDSLEFYKRALQ 190
             +G+ + A S +    KI L    DN P++       A V  N+G+Y D+L  Y ++L+
Sbjct: 277 HRQGKYDDALSMYNKSLKIKLTQLGDNHPSIADTYNNIANVYDNQGKYDDALSMYNKSLK 336

Query: 191 VHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGI 250
           +  +  G     I      +G++ K +  +  AL +                  N++  I
Sbjct: 337 IKLTQLGDNHPSIATTYNNIGRVYKDQGKYDDALSM-----------------YNKSLKI 379

Query: 251 RKGMEKMQRAFEIYP-----YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKS 305
                K+ +  + +P     YC +A  Y     +        + L      + ++ P+ +
Sbjct: 380 -----KLTQLGDNHPSIADTYCNIASVYDDQGKYDDALSMYNKSLKINLTQLGDNHPSIA 434

Query: 306 HSYYNLARSYHSKGDYEKAGLYYMASVK----EINKPHEFIF-PYYGLGQVQLKLGDFRS 360
           + Y+N+A  YH +G Y+ A   Y  S+K    ++   H  I   Y+ +G V    G +  
Sbjct: 435 YIYHNIASVYHHQGKYDDALSMYNKSLKIKLTQLGDNHPSIADTYHNIGCVYDDQGKYDD 494

Query: 361 ALTNFEKVLEI--------YPDNCETLKALGHIYVQLGQIEKAQELLRKAAKID------ 406
           AL+ + K L+I        +P   +T   +G +Y   G+ + A  +  K+ K++      
Sbjct: 495 ALSMYNKSLKIKLTQLGDNHPSIADTYNNIGLVYHHQGKYDDALSMYNKSLKMELTQLGD 554

Query: 407 --PRDAQAFIDLGELLISSDTGAALDAF----KTARTLLKKAGEEVP--IEVLNNIGVIH 458
             P  A  + ++G   +  D G   DA     K+ +  L + G+  P      NNIG ++
Sbjct: 555 NHPSIANTYNNIGR--VYKDQGKYDDALSMYNKSLKINLTQLGDNHPSIANTYNNIGRVY 612

Query: 459 FEKGEFESAHQSFKDAL 475
             +G+++ A   +  +L
Sbjct: 613 NRQGKYDDALSMYNKSL 629



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 101/499 (20%), Positives = 190/499 (38%), Gaps = 111/499 (22%)

Query: 305 SHSYYNLARSYHSKGDYEKAGLYYMASVK------EINKPHEFIFPYYGLGQVQLKLGDF 358
           S SY+N+   YH++G +++A   Y  S++      + N P   +  Y  +GQV    G +
Sbjct: 140 SESYHNIGLVYHNQGKHDEALKEYNKSLRIKLKILKNNDPSIAVL-YNSIGQVYANQGKY 198

Query: 359 RSALTNFEKVLEI--------YPDNCETLKALGHIYVQLGQIEKAQELLRKAAKID---- 406
             AL+ + K L+I        +P   +T   +G +Y   G+ + A  +  K+ KI     
Sbjct: 199 DGALSMYNKSLKIKLTQLGDNHPSIADTYNNIGLVYYHQGKYDDALSMYNKSLKIKLTQL 258

Query: 407 ----PRDAQAFIDLGELLISSDTGAALDAF----KTARTLLKKAGEEVP--IEVLNNIGV 456
               P  A  + ++G  L+    G   DA     K+ +  L + G+  P   +  NNI  
Sbjct: 259 GDNHPSIADTYNNIG--LVYHRQGKYDDALSMYNKSLKIKLTQLGDNHPSIADTYNNIAN 316

Query: 457 IHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGN 516
           ++  +G+++ A   +  +L   I LT L     +     +     +KD   +        
Sbjct: 317 VYDNQGKYDDALSMYNKSL--KIKLTQLGDNHPSIATTYNNIGRVYKDQGKYDD------ 368

Query: 517 HVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQ 576
              L     ++   L +L +  H ++A                D Y  +A++   +    
Sbjct: 369 --ALSMYNKSLKIKLTQLGDN-HPSIA----------------DTYCNIASVYDDQGKYD 409

Query: 577 LSIELVNEALKVN-------------------------GKYPNALSMLG-DLELK----N 606
            ++ + N++LK+N                         GKY +ALSM    L++K     
Sbjct: 410 DALSMYNKSLKINLTQLGDNHPSIAYIYHNIASVYHHQGKYDDALSMYNKSLKIKLTQLG 469

Query: 607 DDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTR 666
           D+     +T+       D +  Y            AL    ++ K++ T L         
Sbjct: 470 DNHPSIADTYHNIGCVYDDQGKYDD----------ALSMYNKSLKIKLTQLGD------- 512

Query: 667 VIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFT---QVQEAASGSVFVQMPDVWINLAHV 723
               H S     N  G+V   +G++D +  ++    +++    G     + + + N+  V
Sbjct: 513 ---NHPSIADTYNNIGLVYHHQGKYDDALSMYNKSLKMELTQLGDNHPSIANTYNNIGRV 569

Query: 724 YFAQGNFALAMKMYQNCLR 742
           Y  QG +  A+ MY   L+
Sbjct: 570 YKDQGKYDDALSMYNKSLK 588



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 104/490 (21%), Positives = 198/490 (40%), Gaps = 77/490 (15%)

Query: 297 VTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK----EINKPHEFIFPYYG-LGQV 351
           + N+ P+ +  Y ++ + Y ++G Y+ A   Y  S+K    ++   H  I   Y  +G V
Sbjct: 174 LKNNDPSIAVLYNSIGQVYANQGKYDGALSMYNKSLKIKLTQLGDNHPSIADTYNNIGLV 233

Query: 352 QLKLGDFRSALTNFEKVLEI--------YPDNCETLKALGHIYVQLGQIEKAQELLRKAA 403
               G +  AL+ + K L+I        +P   +T   +G +Y + G+ + A  +  K+ 
Sbjct: 234 YYHQGKYDDALSMYNKSLKIKLTQLGDNHPSIADTYNNIGLVYHRQGKYDDALSMYNKSL 293

Query: 404 KID--------PRDAQAFIDLGELLISSDTGAALDAF----KTARTLLKKAGEEVP--IE 449
           KI         P  A  + ++    +  + G   DA     K+ +  L + G+  P    
Sbjct: 294 KIKLTQLGDNHPSIADTYNNIAN--VYDNQGKYDDALSMYNKSLKIKLTQLGDNHPSIAT 351

Query: 450 VLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFH 509
             NNIG ++ ++G+++ A   +  +L   I LT L     + + D   ++    D Q   
Sbjct: 352 TYNNIGRVYKDQGKYDDALSMYNKSLK--IKLTQLGDNHPS-IADTYCNIASVYDDQ--G 406

Query: 510 RFENDGNHVELPWNKVTVLFNLARLLEQIHDTVA------ASVLYRLILFKYQDYVDAY- 562
           ++++      L     ++  NL +L +  H ++A      ASV +     KY D +  Y 
Sbjct: 407 KYDD-----ALSMYNKSLKINLTQLGDN-HPSIAYIYHNIASVYHHQ--GKYDDALSMYN 458

Query: 563 ----LRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRA 618
               ++L  +     ++  +   +       GKY +ALSM        +  +K K T + 
Sbjct: 459 KSLKIKLTQLGDNHPSIADTYHNIGCVYDDQGKYDDALSMY-------NKSLKIKLT-QL 510

Query: 619 ASDATDGKDSYATLSL---GNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNL 675
             +     D+Y  + L       Y  AL    ++ K+E T L             H S  
Sbjct: 511 GDNHPSIADTYNNIGLVYHHQGKYDDALSMYNKSLKMELTQLGD----------NHPSIA 560

Query: 676 YAANGAGVVLAEKGQFDVSKDLFTQ---VQEAASGSVFVQMPDVWINLAHVYFAQGNFAL 732
              N  G V  ++G++D +  ++ +   +     G     + + + N+  VY  QG +  
Sbjct: 561 NTYNNIGRVYKDQGKYDDALSMYNKSLKINLTQLGDNHPSIANTYNNIGRVYNRQGKYDD 620

Query: 733 AMKMYQNCLR 742
           A+ MY   L+
Sbjct: 621 ALSMYNKSLK 630


>gi|167391906|ref|XP_001739942.1| O-linked N-acetylglucosamine transferase, ogt [Entamoeba dispar
           SAW760]
 gi|165896156|gb|EDR23653.1| O-linked N-acetylglucosamine transferase, ogt, putative [Entamoeba
           dispar SAW760]
          Length = 434

 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 68/260 (26%), Positives = 116/260 (44%), Gaps = 9/260 (3%)

Query: 151 FKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 210
           FK  LE +++  PAL+G A  E    +   +L ++ +AL+  P+   +IR GIG   Y  
Sbjct: 142 FKRALELNKNYAPALIGLALCELKDHKDGVALSYFIQALKKQPT-NVSIRCGIGRIYYSQ 200

Query: 211 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 270
            ++  A + ++ AL LD   ++AL+ L+ +         +++ +E   RA  I   CA A
Sbjct: 201 KEIKLAIRCYESALVLDTICIDALINLSRIYWDIRTPQTVKRALELANRALMIDNKCAPA 260

Query: 271 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 330
              L         + +  +    A+   N    K + ++ L R  H K D+ KA   Y  
Sbjct: 261 AIVLCEAAMKCNNYKVASEFANIAINYGNEQ-EKIYGHFTLGRIAHQKQDFIKAKEEYNI 319

Query: 331 SVKEINKPHEFIFP--YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQ 388
           +    NK     FP  +Y + QV  +  ++          L+    + + LK LG   ++
Sbjct: 320 AYLSDNKC---TFPALHYRMAQVLFREKNYIQVEKILMNCLKYNGGDFDVLKLLGFTELK 376

Query: 389 LGQIEKAQELLRKAA--KID 406
           L +I +  E L KA+  KID
Sbjct: 377 LNKINETIEYLEKASVFKID 396


>gi|324502359|gb|ADY41039.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
           [Ascaris suum]
          Length = 1100

 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 98/398 (24%), Positives = 161/398 (40%), Gaps = 48/398 (12%)

Query: 93  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 152
           Y+ LG +  ++ +  E    A + Y  A R+       ++     L+A G++EQA SA+ 
Sbjct: 137 YSNLGNVYKERNQLAE----ALENYRIAVRLKPDFIDGYINLAAALVAGGDLEQAVSAYL 192

Query: 153 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 210
             L+ + D   V + LG        GR  ++   Y +A++  P    A    +G      
Sbjct: 193 SALQYNPDLYCVRSDLGNLLKAM--GRLEEAKVCYLKAIETQPQFAVAWS-NLGCVFNAQ 249

Query: 211 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 270
           G++  A   F++A+QLDP  ++A + L            + K      RA   Y     A
Sbjct: 250 GEIWLAIHHFEKAVQLDPNFLDAYINLG----------NVLKEARIFDRAVAAY---LRA 296

Query: 271 LNYLANHFFFTGQHFLV---EQLTETALAVTNHG----PTKSHSYYNLARSYHSKGDYEK 323
           LN   NH    G    V   + L + A+ +        P    +Y NLA +   KG  E+
Sbjct: 297 LNLAGNHAVVHGNLACVYYEQGLIDLAIDMYRKAIELQPNFPDAYCNLANALKEKGLVEE 356

Query: 324 AGLYYMASVKEINKPHEFIFPYYG-----LGQVQLKLGDFRSALTNFEKVLEIYPDNCET 378
           A   Y  ++         + P +      L  ++ + G    A   + K LEIYP+    
Sbjct: 357 AEKAYNTALA--------LCPTHADSQNNLANIKREQGKIEEATRLYLKALEIYPEFAAA 408

Query: 379 LKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTART 437
              L  I  Q G+++ A    ++A +I P  A A+ ++G  L    D G AL  +   R 
Sbjct: 409 HSNLASILQQQGKLQDAINHYKEAIRIAPTFADAYSNMGNTLKEMGDIGGALQCY--TRA 466

Query: 438 LLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
           +    G     +  +N+  IH + G    A QS+  AL
Sbjct: 467 IQINPGFA---DAHSNLASIHKDSGNIPEAIQSYSTAL 501



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 102/482 (21%), Positives = 197/482 (40%), Gaps = 35/482 (7%)

Query: 142 GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 201
           G+   A      +  AD++NV  LL  + + F       S++F   A++ +P+C  A   
Sbjct: 80  GDYANAEQHCNAIWRADQNNVSVLLLLSSIHFQLKNLDKSMQFSSMAIKANPNCAEAYS- 138

Query: 202 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 261
            +G    +  QL +A + ++ A++L P+ ++  + LA   +   +   + + +     A 
Sbjct: 139 NLGNVYKERNQLAEALENYRIAVRLKPDFIDGYINLAAALVAGGD---LEQAVSAYLSAL 195

Query: 262 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 319
           +  P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G
Sbjct: 196 QYNPDLYCVRS--DLGNLLKAMGR---LEEAKVCYLKAIETQPQFAVAWSNLGCVFNAQG 250

Query: 320 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 379
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L +  ++    
Sbjct: 251 EIWLAIHHFE---KAVQLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALNLAGNHAVVH 307

Query: 380 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLL 439
             L  +Y + G I+ A ++ RKA ++ P    A+ +L   L   + G   +A K   T L
Sbjct: 308 GNLACVYYEQGLIDLAIDMYRKAIELQPNFPDAYCNLANAL--KEKGLVEEAEKAYNTAL 365

Query: 440 KKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASM 499
                    +  NN+  I  E+G+ E A + +  AL   I+     + +        AS+
Sbjct: 366 ALCPTHA--DSQNNLANIKREQGKIEEATRLYLKALE--IYPEFAAAHSNL------ASI 415

Query: 500 LQFKDMQLFHRFENDGNH----VELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKY 555
           LQ +      + ++  NH    + +         N+   L+++ D   A   Y   +   
Sbjct: 416 LQQQG-----KLQDAINHYKEAIRIAPTFADAYSNMGNTLKEMGDIGGALQCYTRAIQIN 470

Query: 556 QDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKET 615
             + DA+  LA+I K   N+  +I+  + ALK+   +P+A   L        DW      
Sbjct: 471 PGFADAHSNLASIHKDSGNIPEAIQSYSTALKLKPDFPDAFCNLAHCLQIICDWTDYDNR 530

Query: 616 FR 617
            R
Sbjct: 531 MR 532



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 71/332 (21%), Positives = 130/332 (39%), Gaps = 48/332 (14%)

Query: 89  LGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQAS 148
             V ++ LG +   Q E      LA  ++ KA ++D +    ++  G +L      ++A 
Sbjct: 235 FAVAWSNLGCVFNAQGE----IWLAIHHFEKAVQLDPNFLDAYINLGNVLKEARIFDRAV 290

Query: 149 SAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRY 208
           +A+   L    ++       ACV + +G    +++ Y++A+++ P+ P A    +     
Sbjct: 291 AAYLRALNLAGNHAVVHGNLACVYYEQGLIDLAIDMYRKAIELQPNFPDAY-CNLANALK 349

Query: 209 KLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCA 268
           + G + +A +A+  AL L P + ++   LA +     E   I +      +A EIYP  A
Sbjct: 350 EKGLVEEAEKAYNTALALCPTHADSQNNLANIK---REQGKIEEATRLYLKALEIYPEFA 406

Query: 269 MALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYY 328
            A                                   HS  NLA     +G  + A  +Y
Sbjct: 407 AA-----------------------------------HS--NLASILQQQGKLQDAINHY 429

Query: 329 MASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQ 388
             +++       F   Y  +G    ++GD   AL  + + ++I P   +    L  I+  
Sbjct: 430 KEAIRIAPT---FADAYSNMGNTLKEMGDIGGALQCYTRAIQINPGFADAHSNLASIHKD 486

Query: 389 LGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 420
            G I +A +    A K+ P    AF +L   L
Sbjct: 487 SGNIPEAIQSYSTALKLKPDFPDAFCNLAHCL 518



 Score = 43.5 bits (101), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 96/441 (21%), Positives = 179/441 (40%), Gaps = 61/441 (13%)

Query: 230 NVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQ 289
           ++ AL  LA  + QA + A   +    + RA +         N ++     +  HF ++ 
Sbjct: 65  DIAALTELAHREYQAGDYANAEQHCNAIWRADQ---------NNVSVLLLLSSIHFQLKN 115

Query: 290 LTET----ALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 345
           L ++    ++A+  + P  + +Y NL   Y  +    +A   Y  +V+   KP +FI  Y
Sbjct: 116 LDKSMQFSSMAIKAN-PNCAEAYSNLGNVYKERNQLAEALENYRIAVRL--KP-DFIDGY 171

Query: 346 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKI 405
             L    +  GD   A++ +   L+  PD       LG++   +G++E+A+    KA + 
Sbjct: 172 INLAAALVAGGDLEQAVSAYLSALQYNPDLYCVRSDLGNLLKAMGRLEEAKVCYLKAIET 231

Query: 406 DPRDAQAFIDLG----------------ELLISSDTGAALDAFKTARTLLKKA-----GE 444
            P+ A A+ +LG                E  +  D    LDA+     +LK+A       
Sbjct: 232 QPQFAVAWSNLGCVFNAQGEIWLAIHHFEKAVQLDPN-FLDAYINLGNVLKEARIFDRAV 290

Query: 445 EVPIEVLN----------NIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVID 494
              +  LN          N+  +++E+G  + A   ++ A      + L  +    Y   
Sbjct: 291 AAYLRALNLAGNHAVVHGNLACVYYEQGLIDLAIDMYRKA------IELQPNFPDAYCNL 344

Query: 495 ASASMLQFKDMQLFHRFENDGNH-VELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILF 553
           A+A     K+  L    E   N  + L         NLA +  +      A+ LY   L 
Sbjct: 345 ANA----LKEKGLVEEAEKAYNTALALCPTHADSQNNLANIKREQGKIEEATRLYLKALE 400

Query: 554 KYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAK 613
            Y ++  A+  LA+I + +  LQ +I    EA+++   + +A S +G+   +  D   A 
Sbjct: 401 IYPEFAAAHSNLASILQQQGKLQDAINHYKEAIRIAPTFADAYSNMGNTLKEMGDIGGAL 460

Query: 614 ETFRAASDATDG-KDSYATLS 633
           + +  A     G  D+++ L+
Sbjct: 461 QCYTRAIQINPGFADAHSNLA 481


>gi|386002402|ref|YP_005920701.1| Tetratricopeptide repeat family [Methanosaeta harundinacea 6Ac]
 gi|357210458|gb|AET65078.1| Tetratricopeptide repeat family [Methanosaeta harundinacea 6Ac]
          Length = 1348

 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 74/331 (22%), Positives = 149/331 (45%), Gaps = 17/331 (5%)

Query: 112 LATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACV 171
           LA   Y++A R++  + ++W+ KG  L   G+ ++A  A    +  D +NV A   +   
Sbjct: 214 LAIYAYDEAIRLNPEDLNSWINKGAALYRLGKYDEAIRASNEAIRLDPENVYAWHNKGVA 273

Query: 172 EFNRGRYSDSLEFYKRALQVHPSCPGAI-RLGIGLCRYKLGQLGKARQAFQRALQLDPEN 230
             ++G+Y ++++ Y  A+++ P    A  R G  L     G+  +A QA   A+ LDPEN
Sbjct: 274 LNSQGKYDEAIQAYDEAIRLSPEYADAWNRKGEALLHQ--GKYDEAIQASNEAISLDPEN 331

Query: 231 VEA--LVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVE 288
                +  +A+ +   ++ A     ++    A  + P  A A N         G++   +
Sbjct: 332 ANGWNIKGVALYNRGKSDEA-----IKAYDEAIRLSPEYADAWNNKGLSLKSQGKY---D 383

Query: 289 QLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGL 348
           +  +T        P    ++YN   + +++G Y++A     A  + I    E++  +Y  
Sbjct: 384 EAIQTFNETIRLDPEHVAAWYNKGLTLNNQGKYDEA---IQAFDEAIRLNPEYVDAWYSK 440

Query: 349 GQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPR 408
           G        +  A+  +++V+++ P+  +   + G  +   G+  +A +   +A + +P 
Sbjct: 441 GNALDSQSRYDEAIQAYDEVIKLNPEYADAWNSKGTAFNSQGRYNEAIKAFDEAIRRNPE 500

Query: 409 DAQAFIDLGELLISSDT-GAALDAFKTARTL 438
            A A+ + G  L+S D    A+ AF  A  L
Sbjct: 501 YADAWNNKGVALVSLDKYEEAIQAFDEATRL 531



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 69/363 (19%), Positives = 148/363 (40%), Gaps = 48/363 (13%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
           A Q Y +A R+D      W  KG     +G+ ++A  A+   +  D +   A   +    
Sbjct: 79  AIQDYKEAIRLDPEFVWPWYNKGLAFEKQGKYDEAIKAYNEAIRLDPEYANAWHNKGYAL 138

Query: 173 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 232
           + +G+Y ++++ Y  A++++P    A     G   Y  G   +A +A+  A++LDPE   
Sbjct: 139 YLQGKYDEAIKAYNEAIRLYPEYANAWN-SKGYALYSQGNYDEAIKAYNEAIRLDPEF-- 195

Query: 233 ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTE 292
                                         ++P+         +  F  G++ L     +
Sbjct: 196 ------------------------------MWPWRNK-----GDTLFSQGKYELAIYAYD 220

Query: 293 TALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQ 352
            A+ +    P   +S+ N   + +  G Y++A     AS + I    E ++ ++  G   
Sbjct: 221 EAIRLN---PEDLNSWINKGAALYRLGKYDEA---IRASNEAIRLDPENVYAWHNKGVAL 274

Query: 353 LKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQA 412
              G +  A+  +++ + + P+  +     G   +  G+ ++A +   +A  +DP +A  
Sbjct: 275 NSQGKYDEAIQAYDEAIRLSPEYADAWNRKGEALLHQGKYDEAIQASNEAISLDPENANG 334

Query: 413 FIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFK 472
           +   G  L   + G + +A K     ++ + E    +  NN G+    +G+++ A Q+F 
Sbjct: 335 WNIKGVALY--NRGKSDEAIKAYDEAIRLSPEYA--DAWNNKGLSLKSQGKYDEAIQTFN 390

Query: 473 DAL 475
           + +
Sbjct: 391 ETI 393



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 93/475 (19%), Positives = 185/475 (38%), Gaps = 59/475 (12%)

Query: 127 EPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYK 186
           +P  W  KG  L  +G  ++A   +K  +  D + V     +      +G+Y ++++ Y 
Sbjct: 59  DPDEWNNKGYALYLQGNYDEAIQDYKEAIRLDPEFVWPWYNKGLAFEKQGKYDEAIKAYN 118

Query: 187 RALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA-VMDLQAN 245
            A+++ P    A     G   Y  G+  +A +A+  A++L PE   A  +    +  Q N
Sbjct: 119 EAIRLDPEYANAWH-NKGYALYLQGKYDEAIKAYNEAIRLYPEYANAWNSKGYALYSQGN 177

Query: 246 EAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKS 305
               I+   E    A  + P          +  F  G++ L     + A+ +    P   
Sbjct: 178 YDEAIKAYNE----AIRLDPEFMWPWRNKGDTLFSQGKYELAIYAYDEAIRLN---PEDL 230

Query: 306 HSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNF 365
           +S+ N   + +  G Y++A     AS + I    E ++ ++  G      G +  A+  +
Sbjct: 231 NSWINKGAALYRLGKYDEA---IRASNEAIRLDPENVYAWHNKGVALNSQGKYDEAIQAY 287

Query: 366 EKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDT 425
           ++ + + P+  +     G   +  G+ ++A +   +A  +DP +A  +   G  L   + 
Sbjct: 288 DEAIRLSPEYADAWNRKGEALLHQGKYDEAIQASNEAISLDPENANGWNIKGVALY--NR 345

Query: 426 GAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLD 485
           G + +A K     ++ + E    +  NN G+    +G+++ A Q+F + +          
Sbjct: 346 GKSDEAIKAYDEAIRLSPEYA--DAWNNKGLSLKSQGKYDEAIQTFNETI---------- 393

Query: 486 SKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAAS 545
                                   R   D  HV   +NK   L N  +  E I     A 
Sbjct: 394 ------------------------RL--DPEHVAAWYNKGLTLNNQGKYDEAIQAFDEAI 427

Query: 546 VLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLG 600
            L         +YVDA+        +++    +I+  +E +K+N +Y +A +  G
Sbjct: 428 RLN-------PEYVDAWYSKGNALDSQSRYDEAIQAYDEVIKLNPEYADAWNSKG 475



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 88/434 (20%), Positives = 168/434 (38%), Gaps = 74/434 (17%)

Query: 105 EKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPA 164
           EK+  +  A + YN+A R+D    + W  KG  L  +G+ ++A  A+   +    +   A
Sbjct: 105 EKQGKYDEAIKAYNEAIRLDPEYANAWHNKGYALYLQGKYDEAIKAYNEAIRLYPEYANA 164

Query: 165 LLGQACVEFNRGRYSDSLEFYKRALQVHPS--CPG----------------------AIR 200
              +    +++G Y ++++ Y  A+++ P    P                       AIR
Sbjct: 165 WNSKGYALYSQGNYDEAIKAYNEAIRLDPEFMWPWRNKGDTLFSQGKYELAIYAYDEAIR 224

Query: 201 LGI---------GLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIR 251
           L           G   Y+LG+  +A +A   A++LDPENV A     V     N      
Sbjct: 225 LNPEDLNSWINKGAALYRLGKYDEAIRASNEAIRLDPENVYAWHNKGVA---LNSQGKYD 281

Query: 252 KGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETAL---------------A 296
           + ++    A  + P  A A N         G++    Q +  A+               A
Sbjct: 282 EAIQAYDEAIRLSPEYADAWNRKGEALLHQGKYDEAIQASNEAISLDPENANGWNIKGVA 341

Query: 297 VTNHG----------------PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHE 340
           + N G                P  + ++ N   S  S+G Y++A   +  +++ ++  H 
Sbjct: 342 LYNRGKSDEAIKAYDEAIRLSPEYADAWNNKGLSLKSQGKYDEAIQTFNETIR-LDPEH- 399

Query: 341 FIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLR 400
            +  +Y  G      G +  A+  F++ + + P+  +   + G+      + ++A +   
Sbjct: 400 -VAAWYNKGLTLNNQGKYDEAIQAFDEAIRLNPEYVDAWYSKGNALDSQSRYDEAIQAYD 458

Query: 401 KAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFE 460
           +  K++P  A A+   G    S   G   +A K     +++  E    +  NN GV    
Sbjct: 459 EVIKLNPEYADAWNSKGTAFNSQ--GRYNEAIKAFDEAIRRNPEYA--DAWNNKGVALVS 514

Query: 461 KGEFESAHQSFKDA 474
             ++E A Q+F +A
Sbjct: 515 LDKYEEAIQAFDEA 528



 Score = 42.7 bits (99), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 30/135 (22%), Positives = 61/135 (45%), Gaps = 15/135 (11%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
           A Q +++A+R++  +   W+ KG      G+ ++      + ++A  D++      A   
Sbjct: 521 AIQAFDEATRLNPEDADAWLKKGVAFYHLGKYKETIQVCNVSIQAYDDDLRWNPEDANAR 580

Query: 173 FNRG--------------RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQ 218
            ++G              +Y D+++ Y  A+ ++P    A     G   Y LG+  +A Q
Sbjct: 581 LSKGIALMLKGLALETLDKYEDAVQAYDEAISLNPDDVAAWE-NRGAALYSLGKYDEAVQ 639

Query: 219 AFQRALQLDPENVEA 233
           A+   L+L+PE+  A
Sbjct: 640 AYDEVLRLNPEDANA 654



 Score = 40.4 bits (93), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 37/148 (25%), Positives = 69/148 (46%), Gaps = 5/148 (3%)

Query: 86  LNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVE 145
           L A G  +   G I  +Q E  E    A Q +N+A  ++      W  KG+ L  +G+  
Sbjct: 744 LIAKGNGWALKGIILGEQHEYNE----AMQAFNEAVSLNPAGSFIWSFKGKYLNDQGKYY 799

Query: 146 QASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGL 205
           +A  A  + +  + ++  A   +      +G++ +++  Y  A++++P    A     GL
Sbjct: 800 EAIEAIDMAISLNPESALAWNYKGAALRGQGKHEEAILAYDEAIRLNPDDEDAWN-NKGL 858

Query: 206 CRYKLGQLGKARQAFQRALQLDPENVEA 233
             Y  G   +A QA+ RA+ L+ + V+A
Sbjct: 859 ALYSQGNYSEAIQAYDRAIDLNSQLVQA 886


>gi|334117761|ref|ZP_08491852.1| Tetratricopeptide TPR_1 repeat-containing protein [Microcoleus
           vaginatus FGP-2]
 gi|333460870|gb|EGK89478.1| Tetratricopeptide TPR_1 repeat-containing protein [Microcoleus
           vaginatus FGP-2]
          Length = 1363

 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 65/285 (22%), Positives = 135/285 (47%), Gaps = 12/285 (4%)

Query: 135 GQLLLAKGEVEQASSAFKIVLEADRD-NVPALLGQACVEFNRGR-YSDSLEFYKRALQVH 192
           G+++  +GE+EQA   ++  +  DR+ N+P +     + +++G+ +  ++   ++A+ + 
Sbjct: 52  GKVMQVRGEIEQAKQWYEAAI--DRNPNLPEVYANLGILYSQGKQWGKAIANCEKAISLA 109

Query: 193 PSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRK 252
           P+   A R  +     +L +  +A   + +A  +DP    A   + + +    E     +
Sbjct: 110 PNFAAAYR-QLARVWTQLEKQEEAADCWYQAFNIDPNWATAEEHVTLGN-SLVELGKFDR 167

Query: 253 GMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLA 312
            +E   RA ++ P  A A + L       GQ    E +     A+  + P    SY++L 
Sbjct: 168 AIECYSRAIKLNPTLAKAYHNLGE--MLIGQKRWDEAIANYRQAIAIN-PNSFESYHSLG 224

Query: 313 RSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIY 372
           +++  +G++++A   Y  S+ E+N    +   Y GLG V  +  DF +A+  + + LEI 
Sbjct: 225 KTWAERGEFDRAIACYNKSL-ELNP--NYARAYVGLGNVFAQKRDFDAAIKCYRQTLEIN 281

Query: 373 PDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 417
            ++      LG  + Q    ++A    RKA +I+P     +++LG
Sbjct: 282 DNSYWAYNCLGDAFAQKQMWQEAISCYRKAIEINPNIPWFYVNLG 326



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 65/119 (54%), Gaps = 3/119 (2%)

Query: 302 PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSA 361
           P  S +Y+ L  +  +  +Y++A   Y  ++ E+N   +F + Y  LG V ++L ++  A
Sbjct: 763 PNFSWAYHFLGETLQALEEYDEATAAYRKAI-ELNP--DFCWTYNNLGDVLMELSEWEEA 819

Query: 362 LTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 420
              + K++E+ PD C + + LG  +V L   E A E  RKA +++P D   +  LGE+L
Sbjct: 820 AVAYRKLVELNPDFCWSYERLGKAWVALENWEDATEAYRKAIELNPDDCWLYNSLGEVL 878



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 78/345 (22%), Positives = 151/345 (43%), Gaps = 23/345 (6%)

Query: 134 KGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHP 193
           + ++ LA+G++ +A +A +  L+ + +   A      V   RG    + ++Y+ A+  +P
Sbjct: 17  QAEVYLAEGKLNEAVAACESALKIEPNLAAACQTLGKVMQVRGEIEQAKQWYEAAIDRNP 76

Query: 194 SCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKG 253
           + P  +   +G+   +  Q GKA    ++A+ L P    A   LA +  Q  +     + 
Sbjct: 77  NLP-EVYANLGILYSQGKQWGKAIANCEKAISLAPNFAAAYRQLARVWTQLEKQ---EEA 132

Query: 254 MEKMQRAFEIYPYCAMALNY--LANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNL 311
            +   +AF I P  A A  +  L N     G+    ++  E         PT + +Y+NL
Sbjct: 133 ADCWYQAFNIDPNWATAEEHVTLGNSLVELGK---FDRAIECYSRAIKLNPTLAKAYHNL 189

Query: 312 ARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEI 371
                 +  +++A   Y  ++  IN P+ F   Y+ LG+   + G+F  A+  + K LE+
Sbjct: 190 GEMLIGQKRWDEAIANYRQAIA-IN-PNSF-ESYHSLGKTWAERGEFDRAIACYNKSLEL 246

Query: 372 YPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDA 431
            P+       LG+++ Q    + A +  R+  +I+     A+  LG      D  A    
Sbjct: 247 NPNYARAYVGLGNVFAQKRDFDAAIKCYRQTLEINDNSYWAYNCLG------DAFAQKQM 300

Query: 432 FKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALG 476
           ++ A +  +KA     IE+  NI   +   G   +  +S+ +A+ 
Sbjct: 301 WQEAISCYRKA-----IEINPNIPWFYVNLGIAFTCEKSWDEAVA 340



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 77/338 (22%), Positives = 147/338 (43%), Gaps = 42/338 (12%)

Query: 72  DEYYADVRYERIAI-LNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPST 130
           DE  A+ R + IAI  N+   Y++ LGK   ++ E    F  A   YNK+  ++ +    
Sbjct: 200 DEAIANYR-QAIAINPNSFESYHS-LGKTWAERGE----FDRAIACYNKSLELNPNYARA 253

Query: 131 WVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPA--LLGQACVEFNRGRYSDSLEFYKRA 188
           +VG G +   K + + A   ++  LE + ++  A   LG A  +  +  + +++  Y++A
Sbjct: 254 YVGLGNVFAQKRDFDAAIKCYRQTLEINDNSYWAYNCLGDAFAQ--KQMWQEAISCYRKA 311

Query: 189 LQVHPSCPG-AIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEA 247
           ++++P+ P   + LGI     K     +A  AF  A+Q++P N+  +       L+    
Sbjct: 312 IEINPNIPWFYVNLGIAFTCEK--SWDEAVAAFLHAVQIEP-NLTGINQRLGYVLRKRSE 368

Query: 248 AGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHS 307
           +G+   +    +A E+     +  N L       G  F                      
Sbjct: 369 SGLDSTIATYCQAIEVLASGKIYQNLLG--IELDGAEF---------------------- 404

Query: 308 YYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEK 367
           Y NL  S   +   E A ++Y  +++      E +     L +V+ K  +  + +  +  
Sbjct: 405 YINLGNSLAKQKQLEGAIVFYSMALQIEPNAAEVVAQ---LDKVRAKQQELYAQIAAYRH 461

Query: 368 VLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKI 405
            +EI P N +    LG+I  QLG++E+A    +KA+++
Sbjct: 462 QIEIEPTNSKPYNDLGNILPQLGELEEAIICHQKASEL 499



 Score = 43.9 bits (102), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 71/327 (21%), Positives = 132/327 (40%), Gaps = 29/327 (8%)

Query: 131  WVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPAL--LGQACVEFNRGRYSDSLEFYKRA 188
            W   G +    G +++AS+ ++  ++    N      LG+A  E  +  + ++   Y+RA
Sbjct: 701  WEKLGDIAANTGYLDEASARYQTAIKIKSGNYLTYHKLGKALQE--KELFDEARAAYQRA 758

Query: 189  LQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA--VMDLQANE 246
            ++++P+   A    +G     L +  +A  A+++A++L+P+       L   +M+L   E
Sbjct: 759  IELNPNFSWAYHF-LGETLQALEEYDEATAAYRKAIELNPDFCWTYNNLGDVLMELSEWE 817

Query: 247  AAGI--RKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTK 304
             A +  RK +E        Y     A   L N           E  TE         P  
Sbjct: 818  EAAVAYRKLVELNPDFCWSYERLGKAWVALENW----------EDATEAYRKAIELNPDD 867

Query: 305  SHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTN 364
               Y +L      + ++ +A    +A  + I   HE  + Y  LG      G+   A+  
Sbjct: 868  CWLYNSLGEVLEFQENWPEAA---VAFGRAIELEHEHSWLYKKLGDALRNQGELERAIAI 924

Query: 365  FEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSD 424
            +EK + + P +C   + LG   +   Q E A   L +A +I P   +A+ ++G  L    
Sbjct: 925  YEKGINLDPKSCWCYEGLGLSLIAKQQWEPAITNLVQALQIKPDLFEAYDNIGYALEQQG 984

Query: 425  TGAALDAFKTARTLLKKAGEEVPIEVL 451
             G   D  K +        + +P+ +L
Sbjct: 985  EGDESDRAKCSN-------QNLPLSIL 1004


>gi|67920262|ref|ZP_00513782.1| TPR repeat:Sel1-like repeat:Sel1-like repeat [Crocosphaera watsonii
           WH 8501]
 gi|67857746|gb|EAM52985.1| TPR repeat:Sel1-like repeat:Sel1-like repeat [Crocosphaera watsonii
           WH 8501]
          Length = 353

 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 62/267 (23%), Positives = 122/267 (45%), Gaps = 10/267 (3%)

Query: 141 KGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIR 200
           +G   +A S ++ ++  D +N  A          +G+  ++   YK+A+++ P+   A  
Sbjct: 39  EGRYREAESIWRQIISIDSNNAIAYFYIGLALRKQGKLEEATAAYKKAIELDPNYSFAYN 98

Query: 201 LGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRA 260
             +G    K G+L +A  A+++A++LDP +     A   M L  ++   + + +   ++A
Sbjct: 99  -NMGNALRKQGKLEEAIAAYKKAIELDPNDA---FAYNNMGLALDDQGKLEEAIAAYKKA 154

Query: 261 FEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGD 320
            E+ P  A A   + N     G+   +E+            P  S +Y N+  +   +G 
Sbjct: 155 IELDPNYATAYYNMGNALNRQGK---LEEAIAAYKKAIELDPNYSFAYNNMGVALRKQGK 211

Query: 321 YEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLK 380
           Y++A   Y  ++ EIN    + F Y  +G    K G +  A+  ++K +EI P++     
Sbjct: 212 YDEAIAAYKKAI-EINP--NYAFAYNNMGVALRKQGKYDEAIAAYKKAIEINPNDAFGYN 268

Query: 381 ALGHIYVQLGQIEKAQELLRKAAKIDP 407
            +G      G+ ++A    +KA +IDP
Sbjct: 269 NMGLALDDQGKYDEAIAAHKKALEIDP 295



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 59/244 (24%), Positives = 109/244 (44%), Gaps = 10/244 (4%)

Query: 174 NRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEA 233
           N GRY ++   +++ + +  S        IGL   K G+L +A  A+++A++LDP     
Sbjct: 38  NEGRYREAESIWRQIISID-SNNAIAYFYIGLALRKQGKLEEATAAYKKAIELDPNYS-- 94

Query: 234 LVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTET 293
             A   M     +   + + +   ++A E+ P  A A N +        Q  L E +   
Sbjct: 95  -FAYNNMGNALRKQGKLEEAIAAYKKAIELDPNDAFAYNNMG--LALDDQGKLEEAIAAY 151

Query: 294 ALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQL 353
             A+    P  + +YYN+  + + +G  E+A   Y    K I     + F Y  +G    
Sbjct: 152 KKAIE-LDPNYATAYYNMGNALNRQGKLEEAIAAYK---KAIELDPNYSFAYNNMGVALR 207

Query: 354 KLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAF 413
           K G +  A+  ++K +EI P+       +G    + G+ ++A    +KA +I+P DA  +
Sbjct: 208 KQGKYDEAIAAYKKAIEINPNYAFAYNNMGVALRKQGKYDEAIAAYKKAIEINPNDAFGY 267

Query: 414 IDLG 417
            ++G
Sbjct: 268 NNMG 271



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 65/284 (22%), Positives = 131/284 (46%), Gaps = 18/284 (6%)

Query: 45  IIAREYFKQGKVEQFRQILEEGSSPEIDEYYAD---VRYERIAILNALGVYYTYLGKIET 101
           ++A  Y   G  +   Q+ ++G+  + +  Y +   +  + I+I +   + Y Y+G    
Sbjct: 14  LVATPYV--GMTQSIEQLFQQGNQAQNEGRYREAESIWRQIISIDSNNAIAYFYIGLALR 71

Query: 102 KQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDN 161
           KQ + EE    AT  Y KA  +D +    +   G  L  +G++E+A +A+K  +E D ++
Sbjct: 72  KQGKLEE----ATAAYKKAIELDPNYSFAYNNMGNALRKQGKLEEAIAAYKKAIELDPND 127

Query: 162 VPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGA-IRLGIGLCRYKLGQLGKARQAF 220
             A         ++G+  +++  YK+A+++ P+   A   +G  L R   G+L +A  A+
Sbjct: 128 AFAYNNMGLALDDQGKLEEAIAAYKKAIELDPNYATAYYNMGNALNR--QGKLEEAIAAY 185

Query: 221 QRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFF 280
           ++A++LDP       A   M +   +     + +   ++A EI P  A A N +      
Sbjct: 186 KKAIELDPNYS---FAYNNMGVALRKQGKYDEAIAAYKKAIEINPNYAFAYNNMGVALRK 242

Query: 281 TGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 324
            G++       + A+ +    P  +  Y N+  +   +G Y++A
Sbjct: 243 QGKYDEAIAAYKKAIEIN---PNDAFGYNNMGLALDDQGKYDEA 283



 Score = 46.2 bits (108), Expect = 0.094,   Method: Compositional matrix adjust.
 Identities = 42/171 (24%), Positives = 77/171 (45%), Gaps = 11/171 (6%)

Query: 307 SYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFE 366
           +Y+ +  +   +G  E+A   Y    K I     + F Y  +G    K G    A+  ++
Sbjct: 62  AYFYIGLALRKQGKLEEATAAYK---KAIELDPNYSFAYNNMGNALRKQGKLEEAIAAYK 118

Query: 367 KVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTG 426
           K +E+ P++      +G      G++E+A    +KA ++DP  A A+ ++G  L      
Sbjct: 119 KAIELDPNDAFAYNNMGLALDDQGKLEEAIAAYKKAIELDPNYATAYYNMGNALNRQGK- 177

Query: 427 AALDAFKTARTLLKKAGEEVPIEVL--NNIGVIHFEKGEFESAHQSFKDAL 475
                 + A    KKA E  P      NN+GV   ++G+++ A  ++K A+
Sbjct: 178 -----LEEAIAAYKKAIELDPNYSFAYNNMGVALRKQGKYDEAIAAYKKAI 223



 Score = 42.4 bits (98), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 33/136 (24%), Positives = 66/136 (48%), Gaps = 5/136 (3%)

Query: 93  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 152
           Y  +G    +Q + EE    A   Y KA  +D +    +   G  L  +G+ ++A +A+K
Sbjct: 165 YYNMGNALNRQGKLEE----AIAAYKKAIELDPNYSFAYNNMGVALRKQGKYDEAIAAYK 220

Query: 153 IVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQ 212
             +E + +   A          +G+Y +++  YK+A++++P+        +GL     G+
Sbjct: 221 KAIEINPNYAFAYNNMGVALRKQGKYDEAIAAYKKAIEINPNDAFGYN-NMGLALDDQGK 279

Query: 213 LGKARQAFQRALQLDP 228
             +A  A ++AL++DP
Sbjct: 280 YDEAIAAHKKALEIDP 295


>gi|411119879|ref|ZP_11392255.1| tetratricopeptide repeat protein [Oscillatoriales cyanobacterium
           JSC-12]
 gi|410710035|gb|EKQ67546.1| tetratricopeptide repeat protein [Oscillatoriales cyanobacterium
           JSC-12]
          Length = 467

 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 70/299 (23%), Positives = 129/299 (43%), Gaps = 16/299 (5%)

Query: 121 SRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSD 180
           S    HEP  W  KG  L      E+A  +F   ++   D   AL  +    FN G Y  
Sbjct: 38  SSPTWHEP--WYFKGMALCELQRYEEAVQSFNQAIDLRADYPEALNSRGIALFNLGSYDS 95

Query: 181 SLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV--ALA 238
           ++  Y +A+++ P+   A     G    KLG    A +++ ++L+++P+  ++     + 
Sbjct: 96  AIASYDKAIKLRPTFHQAW-FNRGNALDKLGCYEAALESYDKSLEIEPDYSKSWYNRGIT 154

Query: 239 VMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVT 298
           +  L+  + A     +    +A E  P+ + A    AN      ++    +  E  L++ 
Sbjct: 155 LSKLERYDDA-----IASYDKAIEFRPHYSNAWYNRANILHRQKRYSEALESYERVLSIK 209

Query: 299 NHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDF 358
              P    ++YNL    H  G +E+A   Y  ++K + K   F   +Y  G     LG +
Sbjct: 210 ---PDWHGAWYNLGNILHKLGRHEEAVASYNRALKIVPK---FYGAWYNRGNALDALGRY 263

Query: 359 RSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 417
             A+ ++ + LEI P+  E     G    +  + E+A     +A ++DP+ A+A+   G
Sbjct: 264 DEAIESYRRALEIKPNLREAWYNWGSTLYKASRYEEAIASYDQAIRLDPKFAKAWSSRG 322



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 72/311 (23%), Positives = 129/311 (41%), Gaps = 32/311 (10%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
           A + Y+K+  I+     +W  +G  L      + A +++   +E       A   +A + 
Sbjct: 130 ALESYDKSLEIEPDYSKSWYNRGITLSKLERYDDAIASYDKAIEFRPHYSNAWYNRANIL 189

Query: 173 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPE--- 229
             + RYS++LE Y+R L + P   GA    +G   +KLG+  +A  ++ RAL++ P+   
Sbjct: 190 HRQKRYSEALESYERVLSIKPDWHGAW-YNLGNILHKLGRHEEAVASYNRALKIVPKFYG 248

Query: 230 ----NVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 285
                  AL AL   D          + +E  +RA EI P    A       ++  G   
Sbjct: 249 AWYNRGNALDALGRYD----------EAIESYRRALEIKPNLREA-------WYNWGSTL 291

Query: 286 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGD-YEKAGLYYMASV---KEINKPHEF 341
                 E A+A  +        +   A+++ S+G  + K G+Y  A +   K +    + 
Sbjct: 292 YKASRYEEAIASYDQAIRLDPKF---AKAWSSRGTAFRKLGMYAEAIISYDKAVQHQPDL 348

Query: 342 IFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRK 401
              +YG G     LG   +A+ +++  + I PD      + G     LG  + A     +
Sbjct: 349 YEAWYGRGIALGHLGHNEAAVASYDHAVAINPDFYPAWYSRGVALGHLGDYDAAITSYDQ 408

Query: 402 AAKIDPRDAQA 412
           A +I+P   +A
Sbjct: 409 ALQINPNFPEA 419



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 75/304 (24%), Positives = 136/304 (44%), Gaps = 26/304 (8%)

Query: 178 YSDSLEFYKRALQVHPSC--PGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV 235
           Y D++  ++RALQ  P+   P   + G+ LC  +L +  +A Q+F +A+ L  +  EAL 
Sbjct: 25  YEDAIMSFERALQSSPTWHEPWYFK-GMALC--ELQRYEEAVQSFNQAIDLRADYPEALN 81

Query: 236 A--LAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTET 293
           +  +A+ +L + ++A     +    +A ++ P    A     N     G +    +  + 
Sbjct: 82  SRGIALFNLGSYDSA-----IASYDKAIKLRPTFHQAWFNRGNALDKLGCYEAALESYDK 136

Query: 294 ALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQL 353
           +L +    P  S S+YN   +      Y+ A   Y  +++   +PH +   +Y    +  
Sbjct: 137 SLEIE---PDYSKSWYNRGITLSKLERYDDAIASYDKAIE--FRPH-YSNAWYNRANILH 190

Query: 354 KLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAF 413
           +   +  AL ++E+VL I PD       LG+I  +LG+ E+A     +A KI P+   A+
Sbjct: 191 RQKRYSEALESYERVLSIKPDWHGAWYNLGNILHKLGRHEEAVASYNRALKIVPKFYGAW 250

Query: 414 IDLGELLISSDTGAALDAFKTARTLLKKAGEEVPI--EVLNNIGVIHFEKGEFESAHQSF 471
            + G  L       AL  +  A    ++A E  P   E   N G   ++   +E A  S+
Sbjct: 251 YNRGNAL------DALGRYDEAIESYRRALEIKPNLREAWYNWGSTLYKASRYEEAIASY 304

Query: 472 KDAL 475
             A+
Sbjct: 305 DQAI 308


>gi|456355544|dbj|BAM89989.1| hypothetical protein S58_40030 [Agromonas oligotrophica S58]
          Length = 1410

 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 68/288 (23%), Positives = 129/288 (44%), Gaps = 10/288 (3%)

Query: 132  VGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQV 191
            V   + L ++GE+  A   F+++L     N  AL+G   +     R  ++ ++++RA+ V
Sbjct: 786  VAVAKKLQSRGEISDAEQIFQLILAGQPANFDALVGLGVICTTANRLDEAKDYFQRAVAV 845

Query: 192  HPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIR 251
            + +   A    IG      G+   A Q ++ AL L P +   L A A+  ++ N+   I 
Sbjct: 846  NDTSAEA-HGSIGAVEASAGRYEAAEQHYETALSLAPSHPGILYAFAM--VRQNQGR-IE 901

Query: 252  KGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNL 311
            + M  ++RA +  P    A   L N  +  G+     +     L V +  P  + ++ N+
Sbjct: 902  ESMALLRRAIDNRPQHLDAHFALGNLLYAAGKDI---EAARCYLKVLDFSPEHAETHNNI 958

Query: 312  ARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEI 371
            A     +G  E+A  +Y  ++   ++P ++   Y  LG   L+L     ++      ++I
Sbjct: 959  ANVLLRQGHRERAIEHYKRAIA--SRP-DYADAYGNLGNAFLELNRLEESIEQNLLAIKI 1015

Query: 372  YPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGEL 419
             P    +   LG  Y  LG+ E+A    +KA ++ P DA   ++L  +
Sbjct: 1016 KPHRFGSYNNLGVAYQALGRFEEATAAFQKALELAPDDAPIHLNLANM 1063



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 61/252 (24%), Positives = 108/252 (42%), Gaps = 46/252 (18%)

Query: 166 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 225
           LG AC     GR+S+++  Y RALQ+ P+ P  + L IG C+   GQL  A + +Q+AL 
Sbjct: 192 LGDACRML--GRHSEAIAHYYRALQIQPNAP-VVLLNIGGCQQASGQLDAAIRTYQQALA 248

Query: 226 LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 285
           L P   EA   L  + L                   E+  + A   +Y            
Sbjct: 249 LSPHLAEAHYNLGNLHL-------------------EMKSWPAAIFHY------------ 277

Query: 286 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 345
                 E A+A     P    ++ NLA + HS+G +++A  +Y  +V+   +  ++   +
Sbjct: 278 ------ERAIA---ERPDFPEAHNNLANALHSRGRHDEALAHYDEAVR---RRSDYAAAH 325

Query: 346 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKI 405
              G     +  F  A+ ++   L   P +  T+  L  + + LG++++A      A  +
Sbjct: 326 RNRGDALRDIKRFEQAIASYRAALVHDPRDLTTMNHLAGVLMILGRLDEAARAYESALAV 385

Query: 406 DPRDAQAFIDLG 417
           +PR+    ++ G
Sbjct: 386 NPRNVGVHLNYG 397



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 70/269 (26%), Positives = 120/269 (44%), Gaps = 21/269 (7%)

Query: 211  GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 270
            G++  A Q FQ  L   P N +ALV L V+   AN    + +  +  QRA  +    A A
Sbjct: 796  GEISDAEQIFQLILAGQPANFDALVGLGVICTTANR---LDEAKDYFQRAVAVNDTSAEA 852

Query: 271  LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 330
               +       G++   EQ  ETAL++    P+     Y  A    ++G  E++    MA
Sbjct: 853  HGSIGAVEASAGRYEAAEQHYETALSL---APSHPGILYAFAMVRQNQGRIEES----MA 905

Query: 331  SVKEI--NKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQ 388
             ++    N+P + +  ++ LG +    G    A   + KVL+  P++ ET   + ++ ++
Sbjct: 906  LLRRAIDNRP-QHLDAHFALGNLLYAAGKDIEAARCYLKVLDFSPEHAETHNNIANVLLR 964

Query: 389  LGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTA--RTLLKKAGEEV 446
             G  E+A E  ++A    P  A A+ +LG   +       L+  + +  + LL    +  
Sbjct: 965  QGHRERAIEHYKRAIASRPDYADAYGNLGNAFLE------LNRLEESIEQNLLAIKIKPH 1018

Query: 447  PIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
                 NN+GV +   G FE A  +F+ AL
Sbjct: 1019 RFGSYNNLGVAYQALGRFEEATAAFQKAL 1047



 Score = 43.9 bits (102), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 55/229 (24%), Positives = 91/229 (39%), Gaps = 11/229 (4%)

Query: 96   LGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVL 155
            LG I T     +E    A  Y+ +A  ++          G +  + G  E A   ++  L
Sbjct: 822  LGVICTTANRLDE----AKDYFQRAVAVNDTSAEAHGSIGAVEASAGRYEAAEQHYETAL 877

Query: 156  EADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGK 215
                 +   L   A V  N+GR  +S+   +RA+   P    A    +G   Y  G+  +
Sbjct: 878  SLAPSHPGILYAFAMVRQNQGRIEESMALLRRAIDNRPQHLDA-HFALGNLLYAAGKDIE 936

Query: 216  ARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLA 275
            A + + + L   PE+ E    +A + L+        + +E  +RA    P  A A   L 
Sbjct: 937  AARCYLKVLDFSPEHAETHNNIANVLLRQGHR---ERAIEHYKRAIASRPDYADAYGNLG 993

Query: 276  NHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 324
            N F    +   +E+  E  L      P +  SY NL  +Y + G +E+A
Sbjct: 994  NAFLELNR---LEESIEQNLLAIKIKPHRFGSYNNLGVAYQALGRFEEA 1039


>gi|425451529|ref|ZP_18831350.1| Serine/threonine protein kinase [Microcystis aeruginosa PCC 7941]
 gi|389767119|emb|CCI07396.1| Serine/threonine protein kinase [Microcystis aeruginosa PCC 7941]
          Length = 707

 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 86/351 (24%), Positives = 157/351 (44%), Gaps = 31/351 (8%)

Query: 134 KGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHP 193
           +GQ          A +++   L+ + D + AL G+A       RYS++L  Y++A+Q++P
Sbjct: 338 QGQTFYQLKRYTDALNSYGQALKINPDYLEALQGKADALLALKRYSEALNTYEKAIQINP 397

Query: 194 SCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKG 253
                  LG G    KL +  +A ++F+R L L+P   +A    A + L+  + +  +K 
Sbjct: 398 DSAWQAWLGRGEALDKLDKNQEALESFERVLSLNPAASQAWQGKADIYLELQQYSAAQKA 457

Query: 254 MEKM----QRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGP----TKS 305
           ++K+    Q   +I+     +L  L +   + G     +Q    ALA+ +        K 
Sbjct: 458 LDKLLTFQQNDAKIWYKKGWSLQNLED---YEGAVKAYDQ----ALAIESDNALIWYQKG 510

Query: 306 HSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNF 365
           +S Y L +  ++   Y KAG +          P +F   YY  G +  KLG    AL  F
Sbjct: 511 NSLYQLNKINNALESYSKAGQF---------NP-QFSQAYYSQGIILQKLGRNSEALEAF 560

Query: 366 EKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SD 424
            +  +   +  +     G +  QL + ++A     KA +I  R ++ FI +G       D
Sbjct: 561 TQATKANSNYYQAWLNQGALLHQLERFQEAIASYEKARRISSRKSEVFIGIGNAWYRLGD 620

Query: 425 TGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
              A+ A++ A    K    + P E   ++G   F+ G++E A Q+++++L
Sbjct: 621 YSQAITAYQQAIQRQK----DNP-ETWKSLGNSWFKLGQYERAIQAYQESL 666


>gi|167581033|ref|ZP_02373907.1| TPR domain protein [Burkholderia thailandensis TXDOH]
          Length = 614

 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 71/278 (25%), Positives = 122/278 (43%), Gaps = 14/278 (5%)

Query: 142 GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 201
           G ++ A   ++  L  +  N  AL     +   +GR+ ++ +   RA+++ P+   A++L
Sbjct: 15  GRLDDAEHGYRAALATNPANADALHLFGVLRHQQGRHEEAADLVGRAVELRPND-AALQL 73

Query: 202 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIR--KGMEKMQR 259
            +G     LG+L  A + F+ AL L PE       LA  +L    AA  R    ++  QR
Sbjct: 74  NLGNAFKALGRLDDAIERFRNALTLAPE-----FPLAHYNLGNAYAAQERHDDAVDAFQR 128

Query: 260 AFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 319
           A  + P  A   N L N     G+H         AL +    P  + ++ NL  +  + G
Sbjct: 129 ALALAPGDASIHNNLGNALNALGRHGDALAAFRRALELR---PGHAGAHNNLGMALAALG 185

Query: 320 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 379
           D E+A  ++ A++    +   F+  ++ LG     +G    AL+ FE  L + P     L
Sbjct: 186 DTEEAVAHFRAALAAEPR---FVAAHFNLGNALDAVGRHAQALSAFESALALQPRFPLAL 242

Query: 380 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 417
             L +    LG+   A     +A  +DP    A+++LG
Sbjct: 243 FGLANALAALGRHRDALPHYERAVGLDPSFVLAWLNLG 280



 Score = 49.3 bits (116), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 98/236 (41%), Gaps = 18/236 (7%)

Query: 208 YKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQAN---EAAGIRKGMEKMQRAFEIY 264
           ++ G+L  A   ++ AL  +P N +AL    V+  Q     EAA +      + RA E+ 
Sbjct: 12  HRAGRLDDAEHGYRAALATNPANADALHLFGVLRHQQGRHEEAADL------VGRAVELR 65

Query: 265 PY-CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEK 323
           P   A+ LN L N F   G+   ++   E         P    ++YNL  +Y ++  ++ 
Sbjct: 66  PNDAALQLN-LGNAFKALGR---LDDAIERFRNALTLAPEFPLAHYNLGNAYAAQERHDD 121

Query: 324 AGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALG 383
           A   +  ++            +  LG     LG    AL  F + LE+ P +      LG
Sbjct: 122 AVDAFQRALALAPGDASI---HNNLGNALNALGRHGDALAAFRRALELRPGHAGAHNNLG 178

Query: 384 HIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGA-ALDAFKTARTL 438
                LG  E+A    R A   +PR   A  +LG  L +    A AL AF++A  L
Sbjct: 179 MALAALGDTEEAVAHFRAALAAEPRFVAAHFNLGNALDAVGRHAQALSAFESALAL 234



 Score = 47.8 bits (112), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 76/303 (25%), Positives = 122/303 (40%), Gaps = 20/303 (6%)

Query: 176 GRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV 235
           GR  D+   Y+ AL  +P+   A+ L  G+ R++ G+  +A     RA++L P +     
Sbjct: 15  GRLDDAEHGYRAALATNPANADALHL-FGVLRHQQGRHEEAADLVGRAVELRPNDA---- 69

Query: 236 ALAVMDLQANEAAG-IRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETA 294
           AL +    A +A G +   +E+ + A  + P   +A   L N +    +H       + A
Sbjct: 70  ALQLNLGNAFKALGRLDDAIERFRNALTLAPEFPLAHYNLGNAYAAQERHDDAVDAFQRA 129

Query: 295 LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLK 354
           LA+    P  +  + NL  + ++ G +  A L       E+   H     +  LG     
Sbjct: 130 LALA---PGDASIHNNLGNALNALGRHGDA-LAAFRRALELRPGHAGA--HNNLGMALAA 183

Query: 355 LGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFI 414
           LGD   A+ +F   L   P        LG+    +G+  +A      A  + PR   A  
Sbjct: 184 LGDTEEAVAHFRAALAAEPRFVAAHFNLGNALDAVGRHAQALSAFESALALQPRFPLALF 243

Query: 415 DLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLN--NIGVIHFEKGEFESAHQSFK 472
            L   L      AAL   + A    ++A    P  VL   N+G  H   G  E A ++F 
Sbjct: 244 GLANAL------AALGRHRDALPHYERAVGLDPSFVLAWLNLGTAHHALGAHEMALRAFD 297

Query: 473 DAL 475
            AL
Sbjct: 298 QAL 300



 Score = 45.1 bits (105), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 49/149 (32%), Positives = 66/149 (44%), Gaps = 16/149 (10%)

Query: 87  NALGVYYTYLGKIETKQREKEEHF--ILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEV 144
           N LG+    LG  E    E   HF   LA +    A+  ++         G  L A G  
Sbjct: 175 NNLGMALAALGDTE----EAVAHFRAALAAEPRFVAAHFNL---------GNALDAVGRH 221

Query: 145 EQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIG 204
            QA SAF+  L        AL G A      GR+ D+L  Y+RA+ + PS   A  L +G
Sbjct: 222 AQALSAFESALALQPRFPLALFGLANALAALGRHRDALPHYERAVGLDPSFVLAW-LNLG 280

Query: 205 LCRYKLGQLGKARQAFQRALQLDPENVEA 233
              + LG    A +AF +AL+LDP +  A
Sbjct: 281 TAHHALGAHEMALRAFDQALRLDPSHALA 309


>gi|254413092|ref|ZP_05026864.1| tetratricopeptide repeat domain protein [Coleofasciculus
           chthonoplastes PCC 7420]
 gi|196180256|gb|EDX75248.1| tetratricopeptide repeat domain protein [Coleofasciculus
           chthonoplastes PCC 7420]
          Length = 1179

 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 85/342 (24%), Positives = 142/342 (41%), Gaps = 37/342 (10%)

Query: 101 TKQREKEEHFILATQYYNKASR-IDMHEPST----------------WVGKGQLLLAKGE 143
           TK  + E  +ILA  Y   A R + + EP+T                W G+G  L     
Sbjct: 64  TKTLDIEPCYILALAYRGMAYRGLKLEEPATADFYQVLQREPHTYQDWRGRGLALSELKR 123

Query: 144 VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGI 203
            E+A  +F   +E + D   A  G+       G+Y +++  Y +AL+++P     I    
Sbjct: 124 YEEAIVSFDKAIEINSDYYYAWNGRGLALDELGKYENAIASYDKALEINPD-DYKIWGNR 182

Query: 204 GLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEI 263
           GL    LG+   A  ++ +A++++P N +   A     L  N        +    +A EI
Sbjct: 183 GLALNNLGKYEDAIASYDKAIEINPNNYK---AWGKRGLALNNLGKYEDAIASYDKAIEI 239

Query: 264 YP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLAR---SYHSK 318
            P  Y +  L   A           +E+  E   ++       SH YY   R        
Sbjct: 240 NPGEYGSWILRSFALD--------KLEKYEEVVTSLDQALKINSHEYYAWNRRAIGLDKL 291

Query: 319 GDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCET 378
           G +E+A   Y  ++K IN P ++   +   G V  KLG +  A+++ ++ L+I PD    
Sbjct: 292 GKHEEAIASYDKAIK-IN-PDDYT-AWRNKGFVLHKLGKYEEAISSLDQALKINPDQYYF 348

Query: 379 LKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 420
               G    +LG+  +A     +A +I+P D  A+I+ G  L
Sbjct: 349 CILRGCALDKLGKYSEALASYNQAIQINPDDYTAWINRGSAL 390



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 77/326 (23%), Positives = 135/326 (41%), Gaps = 46/326 (14%)

Query: 117 YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 176
           YN+A  I+  E S W  +G+ L   G+ E+A ++F  V+E + D+  A + +       G
Sbjct: 403 YNQALEINSDEYSAWNLRGKTLNNLGKYEEAITSFDKVIEINSDDYTAWVNRGLALNELG 462

Query: 177 RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVA 236
           +Y  +L  Y +AL+++P+         G   + LG+  KA  ++ +AL+++P+    L  
Sbjct: 463 KYEKALASYDKALEINPNEYYTWN-NQGNALFNLGKYEKALASYDKALEINPDGYTVL-- 519

Query: 237 LAVMDLQANEAAGIRKGMEK-------MQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQ 289
                   N  +G+   + K         +A EI P   MA +      +  GQ+     
Sbjct: 520 --------NNRSGVLCNLGKYSEMITSCDQAIEINPDYYMAWSNRGFGLYNLGQY----- 566

Query: 290 LTETALAVTNHGPTKSHSYY----NLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFP- 344
             E ALA  N     +  YY    N   +      Y+KA   +   +K +N       P 
Sbjct: 567 --EEALASCNKAIEINPDYYMAWSNRGWALFKLKRYQKAFKNWKDGIKNLN----LDTPE 620

Query: 345 --------YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQ 396
                   YY   Q   +LG   + L N  +  + Y    + LK L     +  ++E  Q
Sbjct: 621 HREGRSKLYYSEAQAYYQLGLKEADLDNLLQAKKYY---NKALKFLDTPKYRAQKLEIMQ 677

Query: 397 ELLRKAAKID-PRDAQAFIDLGELLI 421
           +L++    I  P++ Q  ++ G  L+
Sbjct: 678 DLIQVCQYISTPKEVQELLNQGTDLL 703



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 84/403 (20%), Positives = 164/403 (40%), Gaps = 68/403 (16%)

Query: 117 YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 176
           Y+KA  I+  +   W  +G  L   G+ E A +++   +E + +N  A   +     N G
Sbjct: 165 YDKALEINPDDYKIWGNRGLALNNLGKYEDAIASYDKAIEINPNNYKAWGKRGLALNNLG 224

Query: 177 RYSDSLEFYKRALQVHPSCPGAI-----------------------------------RL 201
           +Y D++  Y +A++++P   G+                                    R 
Sbjct: 225 KYEDAIASYDKAIEINPGEYGSWILRSFALDKLEKYEEVVTSLDQALKINSHEYYAWNRR 284

Query: 202 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 261
            IGL   KLG+  +A  ++ +A++++P++  A      +    ++     + +  + +A 
Sbjct: 285 AIGLD--KLGKHEEAIASYDKAIKINPDDYTAWRNKGFV---LHKLGKYEEAISSLDQAL 339

Query: 262 EIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG------PTKSHSYYNLARSY 315
           +I P           ++F   +   +++L + + A+ ++       P    ++ N   + 
Sbjct: 340 KINP---------DQYYFCILRGCALDKLGKYSEALASYNQAIQINPDDYTAWINRGSAL 390

Query: 316 HSKGDYEKAGLYYMASVKEINKPHEFIFPYYGL-GQVQLKLGDFRSALTNFEKVLEIYPD 374
              G Y +A   Y  ++ EIN      +  + L G+    LG +  A+T+F+KV+EI  D
Sbjct: 391 DKLGKYSEALASYNQAL-EINSDE---YSAWNLRGKTLNNLGKYEEAITSFDKVIEINSD 446

Query: 375 NCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKT 434
           +       G    +LG+ EKA     KA +I+P +   + + G  L +      L  ++ 
Sbjct: 447 DYTAWVNRGLALNELGKYEKALASYDKALEINPNEYYTWNNQGNALFN------LGKYEK 500

Query: 435 ARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDAL 475
           A     KA E  P    VLNN   +    G++     S   A+
Sbjct: 501 ALASYDKALEINPDGYTVLNNRSGVLCNLGKYSEMITSCDQAI 543



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 61/263 (23%), Positives = 114/263 (43%), Gaps = 26/263 (9%)

Query: 160 DNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQA 219
           DN+  LL Q   + +RG+  ++L+ +++A Q  P  P  +  G+GL  Y+L Q  ++   
Sbjct: 4   DNIAVLLQQGHEQLDRGQNQEALQIFQQAEQREPENPQVL-FGLGLACYRLEQYQESVDY 62

Query: 220 FQRALQLDPENVEAL----VALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLA 275
             + L ++P  + AL    +A   + L+    A   + +++    ++ +    +AL+ L 
Sbjct: 63  LTKTLDIEPCYILALAYRGMAYRGLKLEEPATADFYQVLQREPHTYQDWRGRGLALSELK 122

Query: 276 NHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYY----NLARSYHSKGDYEKAGLYYMAS 331
            +              E A+   +     +  YY        +    G YE A   Y  +
Sbjct: 123 RY--------------EEAIVSFDKAIEINSDYYYAWNGRGLALDELGKYENAIASYDKA 168

Query: 332 VKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQ 391
           + EIN     I+   GL      LG +  A+ +++K +EI P+N +     G     LG+
Sbjct: 169 L-EINPDDYKIWGNRGLALN--NLGKYEDAIASYDKAIEINPNNYKAWGKRGLALNNLGK 225

Query: 392 IEKAQELLRKAAKIDPRDAQAFI 414
            E A     KA +I+P +  ++I
Sbjct: 226 YEDAIASYDKAIEINPGEYGSWI 248


>gi|425449789|ref|ZP_18829622.1| Genome sequencing data, contig C313 [Microcystis aeruginosa PCC
           7941]
 gi|389769649|emb|CCI05556.1| Genome sequencing data, contig C313 [Microcystis aeruginosa PCC
           7941]
          Length = 569

 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 76/297 (25%), Positives = 135/297 (45%), Gaps = 27/297 (9%)

Query: 134 KGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHP 193
           +G  LLA GE E A SA++ VL  D ++V A +  A V  ++ RYS++L+ Y R   V+ 
Sbjct: 44  QGDRLLAAGEKESALSAYRTVLSFDENSVQAHIKIAQVLQSQKRYSEALQAYNRGFIVNH 103

Query: 194 SCP-----GAIRLGIGLCRYKLGQLGKARQAFQRALQLDPE-NVEALVALAVMDLQA-NE 246
             P         + +G    +  +  +A  A+Q+A+ + P    +  +  A+  LQ  +E
Sbjct: 104 KPPMEPSQSNYLVALGDIFAQEEKWSEAIDAYQKAMIIKPTFKAQFQLGKALYSLQRWDE 163

Query: 247 AAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG----P 302
           AA      + +Q A  + P    A       +F+ G+ +  +QL   A           P
Sbjct: 164 AA------KALQAAVFLDPSQGKA-------YFYLGKAYSEQQLWPEASYAYQQALELIP 210

Query: 303 TKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSAL 362
            +   Y  L  +   +G +++A   Y  ++    K  +    Y  LG+   + G    A+
Sbjct: 211 NQGEIYKKLGETLAKQGKWQEAEQIYRQALIYAPKDGDI---YNYLGKALAEQGKLGEAM 267

Query: 363 TNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGEL 419
             F++  +I P N +  + L +IY+  GQI++     R+A +IDP  ++A   L E+
Sbjct: 268 AVFQQARQISPKNAKIYQNLCYIYINNGQIDEGLNWCRQAVEIDPNLSEARFILQEI 324


>gi|196232461|ref|ZP_03131314.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus
           Ellin428]
 gi|196223533|gb|EDY18050.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus
           Ellin428]
          Length = 760

 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 83/289 (28%), Positives = 127/289 (43%), Gaps = 23/289 (7%)

Query: 176 GRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV 235
           GR  +++E Y+RALQ+ P+ P        L R + G+L +A    Q+A++L P  VE   
Sbjct: 88  GRVDEAMEAYRRALQLQPALPEPYHNLANLLR-QTGRLNEAVGWLQQAIRLRPHGVELHK 146

Query: 236 ALAVMDLQANEAAGIR-KGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETA 294
            L         AAG + + +   Q A  + P  A A N L N     G+  L E +T   
Sbjct: 147 NLG----DVLSAAGRKDEAIAAYQEAIRLNPNFAEAYNNLGN--ILRGERRLSEAITVFG 200

Query: 295 LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFP--YYGLGQVQ 352
            A     P  +  + NLA +    G +  A   Y  ++K   KP    FP   +GLG   
Sbjct: 201 EA-QRLLPDSAEIHNNLAAALADDGQFAHADAAYQRALKI--KP---AFPQALFGLGNNL 254

Query: 353 LKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQA 412
            K G    A   F   LE  PD  +    LG++  ++GQ+++A    R+   + P  A+ 
Sbjct: 255 AKQGRRDEAAAAFRAALETQPDYAKAWNNLGNLLREMGQMDEAIAAYRRTIALQPDYAEV 314

Query: 413 FIDLGELLI-SSDTGAALDAFKTARTL-LKKAGEEVPIEVLNNIGVIHF 459
           + +L   L  + D   A++  + AR L  K AG +      N I  +HF
Sbjct: 315 YSNLANALKDTGDLDGAMETHRWARRLQPKNAGIQS-----NVIYTLHF 358


>gi|406951596|gb|EKD81486.1| hypothetical protein ACD_39C01785G0001, partial [uncultured
           bacterium]
          Length = 387

 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 73/274 (26%), Positives = 127/274 (46%), Gaps = 16/274 (5%)

Query: 204 GLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEI 263
           GL    L Q  +A + F +A  +DP + +A   L ++ LQ        K  + ++RA  I
Sbjct: 46  GLNHLLLEQNKQAEEMFIKAKSIDPYSEQAYNFLGLIYLQE---GLFEKAEDMLKRAVAI 102

Query: 264 YPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARS-YHSKGDYE 322
            P    AL  L   +    +           LA+  + P   +++Y L  + Y S    E
Sbjct: 103 EPMYPEALRNLGKLYLRQDRFDEATTYLRRTLALDVNQP---YTWYLLGMAQYFSGKITE 159

Query: 323 KAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKAL 382
               Y  A   E N P E    +Y LG    +   +  A+ ++E+VL+  P +   L  L
Sbjct: 160 SITSYENAFSMEPNLPVE---AHYNLGVAYHETSRYLEAVRSYEEVLKQEPAHINALNNL 216

Query: 383 GHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISS-DTGAALDAFKTARTLLKK 441
           G +Y  LG+ ++A +L  +  KID  + +A I+LG + +S+ D   A   +++A +L   
Sbjct: 217 GLVYSILGEKDRAIDLFNQVLKIDNGNIKARINLGNVFLSTRDLVEAEKIYRSAISL--- 273

Query: 442 AGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
             ++  I    N+GV+++EKG+F +A   + + L
Sbjct: 274 --DQSDISPRLNLGVVYYEKGDFANARAEWDNLL 305



 Score = 59.7 bits (143), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 77/336 (22%), Positives = 141/336 (41%), Gaps = 22/336 (6%)

Query: 97  GKIETKQR------EKEEHFIL-----ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVE 145
           G I  K+R      E   H +L     A + + KA  ID +    +   G + L +G  E
Sbjct: 31  GPITAKERASSMIQEGLNHLLLEQNKQAEEMFIKAKSIDPYSEQAYNFLGLIYLQEGLFE 90

Query: 146 QASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGL 205
           +A    K  +  +     AL     +   + R+ ++  + +R L +  + P    L +G+
Sbjct: 91  KAEDMLKRAVAIEPMYPEALRNLGKLYLRQDRFDEATTYLRRTLALDVNQPYTWYL-LGM 149

Query: 206 CRYKLGQLGKARQAFQRALQLDPE-NVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIY 264
            +Y  G++ ++  +++ A  ++P   VEA   L V     +E +   + +   +   +  
Sbjct: 150 AQYFSGKITESITSYENAFSMEPNLPVEAHYNLGV---AYHETSRYLEAVRSYEEVLKQE 206

Query: 265 PYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 324
           P    ALN L   +   G+      L    L + N G  K+    NL   + S  D  +A
Sbjct: 207 PAHINALNNLGLVYSILGEKDRAIDLFNQVLKIDN-GNIKAR--INLGNVFLSTRDLVEA 263

Query: 325 GLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGH 384
              Y ++   I+     I P   LG V  + GDF +A   ++ +L+  PDN   L  +G 
Sbjct: 264 EKIYRSA---ISLDQSDISPRLNLGVVYYEKGDFANARAEWDNLLKENPDNVRVLSVMGS 320

Query: 385 IYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 420
            Y++  + + A E+ ++  ++ P +      LG LL
Sbjct: 321 AYLERREYDLAIEVFKRMTELMPENGSIANTLGYLL 356



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 75/335 (22%), Positives = 143/335 (42%), Gaps = 36/335 (10%)

Query: 380 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLL 439
           + L H+ ++  Q ++A+E+  KA  IDP   QA+  LG  LI    G     F+ A  +L
Sbjct: 45  EGLNHLLLE--QNKQAEEMFIKAKSIDPYSEQAYNFLG--LIYLQEGL----FEKAEDML 96

Query: 440 KKAGEEVPI--EVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASA 497
           K+A    P+  E L N+G ++  +  F+ A    +  L   +      ++  T+ +   A
Sbjct: 97  KRAVAIEPMYPEALRNLGKLYLRQDRFDEATTYLRRTLALDV------NQPYTWYLLGMA 150

Query: 498 SMLQFKDMQLFHRFEND-GNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQ 556
                K  +    +EN       LP   V   +NL     +    + A   Y  +L +  
Sbjct: 151 QYFSGKITESITSYENAFSMEPNLP---VEAHYNLGVAYHETSRYLEAVRSYEEVLKQEP 207

Query: 557 DYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF 616
            +++A   L  +         +I+L N+ LK++     A   LG++ L   D V+A++ +
Sbjct: 208 AHINALNNLGLVYSILGEKDRAIDLFNQVLKIDNGNIKARINLGNVFLSTRDLVEAEKIY 267

Query: 617 RAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLY 676
           R+A  + D  D    L+LG   Y             E      A+  +  ++ ++  N+ 
Sbjct: 268 RSAI-SLDQSDISPRLNLGVVYY-------------EKGDFANARAEWDNLLKENPDNVR 313

Query: 677 AANGAGVVLAEKGQFDVSKDLFTQVQE--AASGSV 709
             +  G    E+ ++D++ ++F ++ E    +GS+
Sbjct: 314 VLSVMGSAYLERREYDLAIEVFKRMTELMPENGSI 348



 Score = 47.0 bits (110), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 61/254 (24%), Positives = 107/254 (42%), Gaps = 40/254 (15%)

Query: 580 ELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNY 639
           +++  A+ +   YP AL  LG L L+ D + +A  T+   + A D    Y    LG   Y
Sbjct: 94  DMLKRAVAIEPMYPEALRNLGKLYLRQDRFDEAT-TYLRRTLALDVNQPYTWYLLGMAQY 152

Query: 640 FA------------ALRNEKRAP-----KLEATHLEKAKEL-----YTRVIVQHTSNLYA 677
           F+            A   E   P      L   + E ++ L     Y  V+ Q  +++ A
Sbjct: 153 FSGKITESITSYENAFSMEPNLPVEAHYNLGVAYHETSRYLEAVRSYEEVLKQEPAHINA 212

Query: 678 ANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMY 737
            N  G+V +  G+ D + DLF QV +  +G++  +     INL +V+ +  +   A K+Y
Sbjct: 213 LNNLGLVYSILGEKDRAIDLFNQVLKIDNGNIKAR-----INLGNVFLSTRDLVEAEKIY 267

Query: 738 QNCLRKFYYNTDAQILLYLARTHYEA-------EQWQDCKK---SLLRAIHLAPSNYTLR 787
           ++ +      +D    L L   +YE         +W +  K     +R + +  S Y  R
Sbjct: 268 RSAIS--LDQSDISPRLNLGVVYYEKGDFANARAEWDNLLKENPDNVRVLSVMGSAYLER 325

Query: 788 FDAGVAMQKFSAST 801
            +  +A++ F   T
Sbjct: 326 REYDLAIEVFKRMT 339


>gi|390441006|ref|ZP_10229192.1| putative glycosyl transferase [Microcystis sp. T1-4]
 gi|389835660|emb|CCI33318.1| putative glycosyl transferase [Microcystis sp. T1-4]
          Length = 562

 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 75/297 (25%), Positives = 135/297 (45%), Gaps = 27/297 (9%)

Query: 134 KGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHP 193
           +G  LLA GE E A SA++ VL    ++V A +  A V  ++ RYS++LE Y R   V+ 
Sbjct: 44  QGDRLLAAGEKESALSAYRTVLSFHENSVQAHIKIAQVLQSQKRYSEALEAYNRGFIVND 103

Query: 194 SCP-----GAIRLGIGLCRYKLGQLGKARQAFQRALQLDPE-NVEALVALAVMDLQA-NE 246
             P         + +G    +  +  +A  A+Q+A+ + P    +  +  A+  LQ  +E
Sbjct: 104 KPPMEPSQSNYLVALGDIFAQEEKWSEAIDAYQKAIMIKPTFKAQFQLGKALYSLQRWDE 163

Query: 247 AAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG----P 302
           AA      + +Q A  + P    A       +F+ G+ +  +QL + A           P
Sbjct: 164 AA------KALQAAVFLDPSQGKA-------YFYLGKAYSEQQLWQEASYAYEQALELIP 210

Query: 303 TKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSAL 362
           ++   Y  L  +   +G +++A   Y  ++    K  +    Y  LG+   + G   +A+
Sbjct: 211 SQGEIYKKLGEALGKQGKWQEAEQIYRQALIYAPKDGDI---YNYLGKALAEQGKLGAAM 267

Query: 363 TNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGEL 419
             F++  +I P N    + L + Y+  GQI++     R+A +IDP  ++A   L E+
Sbjct: 268 AVFQQARQISPKNANIYENLCYTYINSGQIDEGLNWCRQAVEIDPNLSEARFILQEI 324


>gi|294673103|ref|YP_003573719.1| hypothetical protein PRU_0335 [Prevotella ruminicola 23]
 gi|294472071|gb|ADE81460.1| tetratricopeptide repeat protein [Prevotella ruminicola 23]
          Length = 1106

 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 76/322 (23%), Positives = 137/322 (42%), Gaps = 44/322 (13%)

Query: 176 GRYSDSLEFYKRALQVHPSCPGAIRLG-------IGLCRYKLGQLGKARQAFQRALQ--- 225
           G Y+ +LE+ K+AL +     G   LG       IG    ++G   KA +  ++AL    
Sbjct: 601 GDYNKALEYQKQALNILEKVLGKEHLGTARLYSNIGNVYSEIGNYDKALEFHKKALYIRE 660

Query: 226 --LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEI--------YPYCAMALNYLA 275
             L  E+ +   +   +     +       +E  ++A +I        +P  A + N + 
Sbjct: 661 KILGKEHSDTAGSYNNIGNVYKDIGNYDHALEFHKKALDIREKVWDKEHPDTASSYNNIG 720

Query: 276 NHFFFTGQHFLVEQLTETALAVT-----NHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 330
           N +   G +    +  + AL +         P  + +Y N+   Y++ G+Y+KA  YY  
Sbjct: 721 NTYNDLGNYDKALECHKHALDICEKVLGKEHPNTAMAYNNIGNVYNNLGNYDKALEYYKQ 780

Query: 331 SVKEINKPHEFIFP-----YYGLGQVQLKLGDFRSALTNFEKVLEI--------YPDNCE 377
           +++   K H    P     YY +G +   +G++  AL  +   LEI        +PD   
Sbjct: 781 ALEIRKKVHGKDHPDTASSYYNIGVLYKDIGNYDHALEYYMIALEIREKVLGAEHPDTVR 840

Query: 378 TLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDA-FKTAR 436
           T + LGH+Y+ +G    A + L KAA +   +AQ +I  G +    + G  ++  +  A 
Sbjct: 841 TYRKLGHLYLNIGDNNLASQWLEKAATLGDTNAQFYI--GHMY---EIGKGVEKNYVVAA 895

Query: 437 TLLKKAGEEVPIEVLNNIGVIH 458
               KA E+       N+G+I+
Sbjct: 896 EWYSKAAEQGDARAQYNLGLIY 917



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 87/374 (23%), Positives = 155/374 (41%), Gaps = 50/374 (13%)

Query: 152 KIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL-------GIG 204
           KI+ +   D V        V ++ G Y  +LE++K AL +     G   L        IG
Sbjct: 451 KILGKEHPDTVRTYSNIGIVYYDFGNYDKALEYHKHALDIREKVLGKEHLDTADSYNNIG 510

Query: 205 LCRYKLGQLGKARQAFQRALQ-----LDPENVEALVALAVMDLQANEAAGIRKGMEKMQR 259
           L  +  G   KA +  ++AL      L  ++++   +   + +         K +E  + 
Sbjct: 511 LVYFDFGNYDKALEFHKKALDIREKVLGKDHLDTTGSYNNIGIGYYHLGNYDKALEYHKH 570

Query: 260 AFEI--------YPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSH----- 306
           A EI        +P  AMA   +   +   G +    +  + AL +      K H     
Sbjct: 571 ALEICEKVLGKEHPNTAMAYTNIGLVYLELGDYNKALEYQKQALNILEKVLGKEHLGTAR 630

Query: 307 SYYNLARSYHSKGDYEKAGLYYMASV----KEINKPH-EFIFPYYGLGQVQLKLGDFRSA 361
            Y N+   Y   G+Y+KA  ++  ++    K + K H +    Y  +G V   +G++  A
Sbjct: 631 LYSNIGNVYSEIGNYDKALEFHKKALYIREKILGKEHSDTAGSYNNIGNVYKDIGNYDHA 690

Query: 362 LTNFEKVLEI--------YPDNCETLKALGHIYVQLGQIEKAQELLRKAAKI-------- 405
           L   +K L+I        +PD   +   +G+ Y  LG  +KA E  + A  I        
Sbjct: 691 LEFHKKALDIREKVWDKEHPDTASSYNNIGNTYNDLGNYDKALECHKHALDICEKVLGKE 750

Query: 406 DPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKA-GEEVPIEVLN--NIGVIHFEK 461
            P  A A+ ++G +  +  +   AL+ +K A  + KK  G++ P    +  NIGV++ + 
Sbjct: 751 HPNTAMAYNNIGNVYNNLGNYDKALEYYKQALEIRKKVHGKDHPDTASSYYNIGVLYKDI 810

Query: 462 GEFESAHQSFKDAL 475
           G ++ A + +  AL
Sbjct: 811 GNYDHALEYYMIAL 824



 Score = 46.6 bits (109), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 66/266 (24%), Positives = 115/266 (43%), Gaps = 46/266 (17%)

Query: 255 EKMQRAFEIYPYC---AMALNYLAN---HFFFTGQHFLVEQ-LTETALAVTN-------- 299
           E++++A EIY      A  +NY  +    FF+    FL +  + + A+ + N        
Sbjct: 350 ERIKQAEEIYKLADAIAQEINYDQDKYIDFFWEYSGFLRDHAIFDNAIEIHNRQIKMCED 409

Query: 300 -HG---PTKSHSYYNLARSYHSKGDYEKAGLYYMASV----KEINKPH-EFIFPYYGLGQ 350
            HG   P  + SY N+       G+Y+KA  Y+  ++    K + K H + +  Y  +G 
Sbjct: 410 FHGKVHPDTARSYNNIGIVNDCLGNYDKALKYFEQALNIREKILGKEHPDTVRTYSNIGI 469

Query: 351 VQLKLGDFRSALTNFEKVLEI--------YPDNCETLKALGHIYVQLGQIEKAQELLRKA 402
           V    G++  AL   +  L+I        + D  ++   +G +Y   G  +KA E  +KA
Sbjct: 470 VYYDFGNYDKALEYHKHALDIREKVLGKEHLDTADSYNNIGLVYFDFGNYDKALEFHKKA 529

Query: 403 AKI----------DPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKA-GEEVPIEVL 451
             I          D   +   I +G   + +    AL+  K A  + +K  G+E P   +
Sbjct: 530 LDIREKVLGKDHLDTTGSYNNIGIGYYHLGN-YDKALEYHKHALEICEKVLGKEHPNTAM 588

Query: 452 --NNIGVIHFEKGEFESAHQSFKDAL 475
              NIG+++ E G++  A +  K AL
Sbjct: 589 AYTNIGLVYLELGDYNKALEYQKQAL 614


>gi|167619111|ref|ZP_02387742.1| TPR domain protein [Burkholderia thailandensis Bt4]
 gi|257138346|ref|ZP_05586608.1| TPR domain-containing protein [Burkholderia thailandensis E264]
          Length = 614

 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 71/278 (25%), Positives = 122/278 (43%), Gaps = 14/278 (5%)

Query: 142 GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 201
           G ++ A   ++  L  +  N  AL     +   +GR+ ++ +   RA+++ P+   A++L
Sbjct: 15  GRLDDAEHGYRAALATNPANADALHLFGVLRHQQGRHEEAADLVGRAVELRPND-AALQL 73

Query: 202 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIR--KGMEKMQR 259
            +G     LG+L  A + F+ AL L PE       LA  +L    AA  R    ++  QR
Sbjct: 74  NLGNAFKALGRLDDAIERFRNALTLAPE-----FPLAHYNLGNAYAAQERHDDAVDAFQR 128

Query: 260 AFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 319
           A  + P  A   N L N     G+H         AL +    P  + ++ NL  +  + G
Sbjct: 129 ALALAPGDASIHNNLGNALNALGRHGDALAAFRRALELR---PGHAGAHNNLGMALAALG 185

Query: 320 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 379
           D E+A  ++ A++    +   F+  ++ LG     +G    AL+ FE  L + P     L
Sbjct: 186 DTEEAIAHFRAALAAEPR---FVAAHFNLGNALDAVGRHAQALSAFESALALQPRFPLAL 242

Query: 380 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 417
             L +    LG+   A     +A  +DP    A+++LG
Sbjct: 243 FGLANALAALGRHRDALPHYERAVGLDPSFVLAWLNLG 280



 Score = 48.9 bits (115), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 98/236 (41%), Gaps = 18/236 (7%)

Query: 208 YKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQAN---EAAGIRKGMEKMQRAFEIY 264
           ++ G+L  A   ++ AL  +P N +AL    V+  Q     EAA +      + RA E+ 
Sbjct: 12  HRAGRLDDAEHGYRAALATNPANADALHLFGVLRHQQGRHEEAADL------VGRAVELR 65

Query: 265 PY-CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEK 323
           P   A+ LN L N F   G+   ++   E         P    ++YNL  +Y ++  ++ 
Sbjct: 66  PNDAALQLN-LGNAFKALGR---LDDAIERFRNALTLAPEFPLAHYNLGNAYAAQERHDD 121

Query: 324 AGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALG 383
           A   +  ++            +  LG     LG    AL  F + LE+ P +      LG
Sbjct: 122 AVDAFQRALALAPGDASI---HNNLGNALNALGRHGDALAAFRRALELRPGHAGAHNNLG 178

Query: 384 HIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGA-ALDAFKTARTL 438
                LG  E+A    R A   +PR   A  +LG  L +    A AL AF++A  L
Sbjct: 179 MALAALGDTEEAIAHFRAALAAEPRFVAAHFNLGNALDAVGRHAQALSAFESALAL 234



 Score = 47.8 bits (112), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 76/303 (25%), Positives = 122/303 (40%), Gaps = 20/303 (6%)

Query: 176 GRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV 235
           GR  D+   Y+ AL  +P+   A+ L  G+ R++ G+  +A     RA++L P +     
Sbjct: 15  GRLDDAEHGYRAALATNPANADALHL-FGVLRHQQGRHEEAADLVGRAVELRPNDA---- 69

Query: 236 ALAVMDLQANEAAG-IRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETA 294
           AL +    A +A G +   +E+ + A  + P   +A   L N +    +H       + A
Sbjct: 70  ALQLNLGNAFKALGRLDDAIERFRNALTLAPEFPLAHYNLGNAYAAQERHDDAVDAFQRA 129

Query: 295 LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLK 354
           LA+    P  +  + NL  + ++ G +  A L       E+   H     +  LG     
Sbjct: 130 LALA---PGDASIHNNLGNALNALGRHGDA-LAAFRRALELRPGHAGA--HNNLGMALAA 183

Query: 355 LGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFI 414
           LGD   A+ +F   L   P        LG+    +G+  +A      A  + PR   A  
Sbjct: 184 LGDTEEAIAHFRAALAAEPRFVAAHFNLGNALDAVGRHAQALSAFESALALQPRFPLALF 243

Query: 415 DLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLN--NIGVIHFEKGEFESAHQSFK 472
            L   L      AAL   + A    ++A    P  VL   N+G  H   G  E A ++F 
Sbjct: 244 GLANAL------AALGRHRDALPHYERAVGLDPSFVLAWLNLGTAHHALGAHEMALRAFD 297

Query: 473 DAL 475
            AL
Sbjct: 298 QAL 300



 Score = 44.7 bits (104), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 49/149 (32%), Positives = 66/149 (44%), Gaps = 16/149 (10%)

Query: 87  NALGVYYTYLGKIETKQREKEEHF--ILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEV 144
           N LG+    LG  E    E   HF   LA +    A+  ++         G  L A G  
Sbjct: 175 NNLGMALAALGDTE----EAIAHFRAALAAEPRFVAAHFNL---------GNALDAVGRH 221

Query: 145 EQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIG 204
            QA SAF+  L        AL G A      GR+ D+L  Y+RA+ + PS   A  L +G
Sbjct: 222 AQALSAFESALALQPRFPLALFGLANALAALGRHRDALPHYERAVGLDPSFVLAW-LNLG 280

Query: 205 LCRYKLGQLGKARQAFQRALQLDPENVEA 233
              + LG    A +AF +AL+LDP +  A
Sbjct: 281 TAHHALGAHEMALRAFDQALRLDPSHALA 309


>gi|406912627|gb|EKD52197.1| peptidase C14 caspase catalytic subunit P20 [uncultured bacterium]
          Length = 714

 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 73/322 (22%), Positives = 128/322 (39%), Gaps = 28/322 (8%)

Query: 106 KEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPAL 165
           KE   +   QYY+          S +V +G    A G+V++A  A+ I L  D  N  A 
Sbjct: 278 KEYDILTLRQYYS----------SDYVNRGYAWQAGGDVDRALDAYAIALMLDSKNEDAY 327

Query: 166 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 225
                   ++G +  ++  Y  A++  P     +    G   +K G   +A   F +AL+
Sbjct: 328 FNSGNAWSDKGNFEKAIGAYSNAIEFDPQNH-KLYANRGKAWFKTGHFDEAISDFTQALK 386

Query: 226 LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 285
           +D  +           L   E     + +    +A E  P   +A       F+  G+ +
Sbjct: 387 IDEHDANTYYDRGTAWL---EKKNYEQAITDFNKAIEENPNLDIA-------FYNRGRAW 436

Query: 286 LVEQLTETAL----AVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEF 341
             +Q    AL       +  P    +Y N    Y   G Y+KA +   + + EIN     
Sbjct: 437 KAKQDITKALEDYSKAIDINPIFESAYNNRGNLYLGNGFYDKA-IADFSKLIEINPSRSD 495

Query: 342 IFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRK 401
            +   GL      +G++  A+ +++K L I P N       G  +V +G+I KA +   K
Sbjct: 496 AYSNRGLAWS--GVGEYSKAIEDYDKALLIEPSNIHAYVNRGVAWVHMGEIHKAFDDYNK 553

Query: 402 AAKIDPRDAQAFIDLGELLISS 423
           A +I+P  + A+ +   L + +
Sbjct: 554 ALQINPNFSHAYANRANLFLQT 575



 Score = 40.0 bits (92), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 83/409 (20%), Positives = 160/409 (39%), Gaps = 47/409 (11%)

Query: 305 SHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTN 364
           S  Y N   ++ + GD ++A   Y  ++   +K  +    Y+  G      G+F  A+  
Sbjct: 290 SSDYVNRGYAWQAGGDVDRALDAYAIALMLDSKNED---AYFNSGNAWSDKGNFEKAIGA 346

Query: 365 FEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSD 424
           +   +E  P N +     G  + + G  ++A     +A KID  DA  + D G   +   
Sbjct: 347 YSNAIEFDPQNHKLYANRGKAWFKTGHFDEAISDFTQALKIDEHDANTYYDRGTAWLEKK 406

Query: 425 TGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGD------- 477
                  ++ A T   KA EE P     N+ +  + +G    A Q    AL D       
Sbjct: 407 N------YEQAITDFNKAIEENP-----NLDIAFYNRGRAWKAKQDITKALEDYSKAIDI 455

Query: 478 -GIWLTLLDSKTKTYVIDA--SASMLQFKDMQLFHRFENDG-NHVELPWNKVTVLFNLAR 533
             I+ +  +++   Y+ +     ++  F  +   +   +D  ++  L W+ V        
Sbjct: 456 NPIFESAYNNRGNLYLGNGFYDKAIADFSKLIEINPSRSDAYSNRGLAWSGV------GE 509

Query: 534 LLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYP 593
             + I D   A ++    +  Y +   A++ +  I KA ++        N+AL++N  + 
Sbjct: 510 YSKAIEDYDKALLIEPSNIHAYVNRGVAWVHMGEIHKAFDD-------YNKALQINPNFS 562

Query: 594 NALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLE 653
           +A +   +L L+  +   A      A ++     S    SL   N+ +   +++   KL 
Sbjct: 563 HAYANRANLFLQTGNLNSAMTDIAFAMNSKPDMSSNQLYSLVENNFLSIFESDEET-KLT 621

Query: 654 ATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQ 702
            T   +      RV+    S L+ +      L E  Q + +K+LF  +Q
Sbjct: 622 MTSFGETGLSLVRVV----SCLFFS----YCLWEANQPEKAKELFVLIQ 662


>gi|390958075|ref|YP_006421832.1| Tfp pilus assembly protein PilF [Terriglobus roseus DSM 18391]
 gi|390958416|ref|YP_006422173.1| Tfp pilus assembly protein PilF [Terriglobus roseus DSM 18391]
 gi|390412993|gb|AFL88497.1| Tfp pilus assembly protein PilF [Terriglobus roseus DSM 18391]
 gi|390413334|gb|AFL88838.1| Tfp pilus assembly protein PilF [Terriglobus roseus DSM 18391]
          Length = 580

 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 92/336 (27%), Positives = 143/336 (42%), Gaps = 31/336 (9%)

Query: 96  LGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVL 155
           LG +  +QR  E+    A      A   D+         G +LLA  +   A+S FK  +
Sbjct: 174 LGTVTAQQRRYEQ----AEAQLEAALTADVRYVPAHAHLGSVLLALHQPAPAASEFKKAV 229

Query: 156 E-ADRDNVPAL-LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL--GIGLCRYKLG 211
           +  D  +  A   G+A VE NR    D++   + ALQ  PS    + L   + L R   G
Sbjct: 230 DLGDASSATAAQFGRALVELNRA--DDAVAVLEPALQRDPSS---LHLMYALALARQAQG 284

Query: 212 QLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMAL 271
               +   F + +  +PEN EAL    +  +Q  +AAG   G+ + Q A       A + 
Sbjct: 285 DAAASLALFAKFVAAEPENAEALTNYGLALVQTGDAAG---GLRRYQAAL------AHSD 335

Query: 272 NYLANHFFFTGQHFLVEQLTETALAVTNHG----PTKSHSYYNLARSYHSKGDYEKAGLY 327
           N L       G  +L +   + AL     G    P     +Y+L  +   K D   A   
Sbjct: 336 NALLRQNI--GVAYLQQSDLDHALEQFRAGLAKEPGSVQLHYDLGLALKLKDDVAGA-TA 392

Query: 328 YMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYV 387
            +   +E++ P+    PY  LG ++++ G F+ A    +K + + P N E    LG +Y 
Sbjct: 393 ELRKTEELD-PNLPDAPYT-LGVLEMQQGRFQEAAQQLQKAVMLEPHNGEAWALLGSVYR 450

Query: 388 QLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISS 423
           Q G+ EKA E LR+A K+ P      I L  ++  S
Sbjct: 451 QGGESEKAAEALRQAIKLQPDAPGPHITLASVMQES 486



 Score = 40.8 bits (94), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 47/176 (26%), Positives = 70/176 (39%), Gaps = 12/176 (6%)

Query: 302 PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSA 361
           P+  H  Y LA +  ++GD   A L   A        +      YGL  VQ   GD    
Sbjct: 267 PSSLHLMYALALARQAQGDA-AASLALFAKFVAAEPENAEALTNYGLALVQT--GDAAGG 323

Query: 362 LTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLI 421
           L  ++  L  + DN    + +G  Y+Q   ++ A E  R     +P   Q   DLG  L 
Sbjct: 324 LRRYQAAL-AHSDNALLRQNIGVAYLQQSDLDHALEQFRAGLAKEPGSVQLHYDLGLALK 382

Query: 422 SSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDAL 475
             D  A       A   L+K  E  P   +    +GV+  ++G F+ A Q  + A+
Sbjct: 383 LKDDVAG------ATAELRKTEELDPNLPDAPYTLGVLEMQQGRFQEAAQQLQKAV 432


>gi|187918068|ref|YP_001883631.1| tetratricopeptide repeat family protein [Borrelia hermsii DAH]
 gi|119860916|gb|AAX16711.1| tetratricopeptide repeat family protein [Borrelia hermsii DAH]
          Length = 380

 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 72/318 (22%), Positives = 132/318 (41%), Gaps = 14/318 (4%)

Query: 123 IDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSL 182
           +D+ E S    +G  L+ +  + +A   F  +L+ D DN  AL+G   +E  +  +  ++
Sbjct: 22  LDVTEKSK---RGYQLIKEERLSEAEELFDDILQKDDDNNYALVGLGDIERKKRNFDKAI 78

Query: 183 EFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDL 242
            +Y+R L  H +   A+  G+G C   LG   KA   ++  L+ D EN+  L  +A    
Sbjct: 79  IYYQRCLAKHSNNNYAL-FGLGDCYRSLGDYKKATDVWEEYLKYDSENITVLTRVAS--- 134

Query: 243 QANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGP 302
              +    +K  +   R  E+ P    AL  +  H ++  + +         +   N   
Sbjct: 135 SYRKLKNFQKSRQSYLRVLELVPDNDYALVGIG-HLYYDFKEYKEALKYWLKMYEINQVK 193

Query: 303 TKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSAL 362
                  ++   Y    ++ K G+Y+     EI+ P+ F +  +GL        ++  AL
Sbjct: 194 IDVRVLTSIGNCYRKLKEFSK-GIYFFKRALEIS-PNNF-YAIFGLADCYRGNKEYHEAL 250

Query: 363 TNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS 422
             +  ++E    N   L  +G  Y  L + + AQ   +KA  +   D   F  LG  L+ 
Sbjct: 251 KYWLTIIERDSKNNLVLTRVGDTYRYLKEYDNAQIYYKKALDV---DFDMFAILGLALLQ 307

Query: 423 SDTGAALDAFKTARTLLK 440
            + G   +A    + L+K
Sbjct: 308 KEQGQYEEALSAIKNLIK 325



 Score = 42.0 bits (97), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 36/158 (22%), Positives = 73/158 (46%), Gaps = 5/158 (3%)

Query: 318 KGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCE 377
           K +++KA +YY   + + +  +   +  +GLG     LGD++ A   +E+ L+   +N  
Sbjct: 71  KRNFDKAIIYYQRCLAKHSNNN---YALFGLGDCYRSLGDYKKATDVWEEYLKYDSENIT 127

Query: 378 TLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTART 437
            L  +   Y +L   +K+++   +  ++ P +  A + +G L    D     +A K    
Sbjct: 128 VLTRVASSYRKLKNFQKSRQSYLRVLELVPDNDYALVGIGHLYY--DFKEYKEALKYWLK 185

Query: 438 LLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
           + +    ++ + VL +IG  + +  EF      FK AL
Sbjct: 186 MYEINQVKIDVRVLTSIGNCYRKLKEFSKGIYFFKRAL 223


>gi|91772658|ref|YP_565350.1| TPR repeat-containing protein [Methanococcoides burtonii DSM 6242]
 gi|91711673|gb|ABE51600.1| Tetratricopeptide repeat protein [Methanococcoides burtonii DSM 6242]
          Length = 1049

 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 81/343 (23%), Positives = 141/343 (41%), Gaps = 38/343 (11%)

Query: 113  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
            A   Y KA  +D      W    Q +        A  A+  +L  D +N  ALL +    
Sbjct: 686  AINNYEKAVDLDSSYKDAWFALAQNVYKSSNYYYAIQAYDGLLNLDPENKTALLQKGQAY 745

Query: 173  FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 232
               G Y  SL  Y + L+V      A  L  GL  Y LG L  A  ++ + L  DP+N++
Sbjct: 746  DKIGIYRSSLASYNKLLKVDTDNTEAWYLR-GLASYNLGNLEDAVYSYDKVLSSDPQNID 804

Query: 233  ALVALA------------------VMDLQANEAAGI-RKG--MEKM---QRAFEIY---- 264
             L+A +                  V++++ ++ + + +KG   EK+   + A + Y    
Sbjct: 805  VLLAQSLVLEDLGLFEDSINNYDKVLEMKVDDPSVLMKKGNVYEKLGLYKDANDCYDIVL 864

Query: 265  ---PYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDY 321
               P  ++AL+    + +  G +  +  + +  L +  + P  + ++YN     +    Y
Sbjct: 865  INEPANSLALSRKGFNLYMLGDY--IGAMDQYDLVIAKN-PYDAAAWYNKGNVAYLTSSY 921

Query: 322  EKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKA 381
              +  +Y+ +V+   K    I  +Y LG +    GD  +A+T +EK L I P+    L  
Sbjct: 922  AGSTQFYLKAVELQPKS---ITAWYNLGYIANIRGDVDTAITYYEKALAIDPNAASALYN 978

Query: 382  LGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSD 424
                + ++GQ   A+   +K   IDP    A  D G    + D
Sbjct: 979  KRFAHYRVGQSVSAETERKKLDVIDPEFIVALDDRGTKFFTPD 1021



 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 137/575 (23%), Positives = 214/575 (37%), Gaps = 126/575 (21%)

Query: 131 WVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQ 190
           W  KG L L   + E+A  +F+ VLE D  +      +A      G Y++++  Y  AL+
Sbjct: 400 WYDKGTLYLGLSDYEEAVLSFEKVLELDSKHAVVWYKKALALDKLGNYNEAIICYTEALR 459

Query: 191 VHPSCPGAIRLGIGLCRYKLGQLGKARQA---FQRALQLDPENVEALVALAV----MDLQ 243
             PSCP    L      Y L   G+ ++A   +++ ++LDP+   A  AL +    MD  
Sbjct: 460 RDPSCPNVWYLK----GYDLDTTGRYKEAVSCYRKTVELDPQFTLAWYALGLDLAHMDEH 515

Query: 244 ANEAAG---------------IRKG--MEKM---QRAFEIYPYCAMALNY--LANHFFFT 281
           +   A                 RKG  ++K+   Q A E Y   A++L+    A  F   
Sbjct: 516 SEAIAAYDQVIEQNSDFSDAYYRKGRTLDKLGLYQDAIESYR-VAISLDSSNSAASFQME 574

Query: 282 GQHFLVEQLT-ETALAVTNHGPT----------KSHSYYNLA------------------ 312
                VE+L   +A+   N GP              S YN A                  
Sbjct: 575 ADISRVERLNHSSAIPSQNIGPIFDIFEIIKGMTGISDYNAAIMEQNNVDLIGVVPDGYD 634

Query: 313 ------RSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFE 366
                  S   KG YE A L Y  ++  + KP+  +  +Y  GQ    LGD  SA+ N+E
Sbjct: 635 AWVAKGGSLFVKGSYENALLSYNKAI--MIKPNSSV-TWYMRGQTYEMLGDRSSAINNYE 691

Query: 367 KVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTG 426
           K +++     +   AL     +      A +       +DP +  A +  G+        
Sbjct: 692 KAVDLDSSYKDAWFALAQNVYKSSNYYYAIQAYDGLLNLDPENKTALLQKGQ-------- 743

Query: 427 AALDAFKTARTLLKKAGEEVPIEVLNN-----IGVIHFEKGEFESAHQSFKDALGDGIWL 481
            A D     R+ L    + + ++  N       G+  +  G  E A  S+   L      
Sbjct: 744 -AYDKIGIYRSSLASYNKLLKVDTDNTEAWYLRGLASYNLGNLEDAVYSYDKVLSS---- 798

Query: 482 TLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHV-ELPWNKVTVLFNLARLLEQIHD 540
              D +    ++   A  L  +D+ LF    N+ + V E+  +  +VL     + E+   
Sbjct: 799 ---DPQNIDVLL---AQSLVLEDLGLFEDSINNYDKVLEMKVDDPSVLMKKGNVYEK--- 849

Query: 541 TVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLG 600
                      L  Y+D  D Y  +  I +  N+L LS +  N            L MLG
Sbjct: 850 -----------LGLYKDANDCY-DIVLINEPANSLALSRKGFN------------LYMLG 885

Query: 601 DLELKND--DWVKAKETFRAASDATDGKDSYATLS 633
           D     D  D V AK  + AA+    G  +Y T S
Sbjct: 886 DYIGAMDQYDLVIAKNPYDAAAWYNKGNVAYLTSS 920



 Score = 45.4 bits (106), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 83/411 (20%), Positives = 155/411 (37%), Gaps = 54/411 (13%)

Query: 99  IETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEAD 158
           ++  + +K+E  I++   Y +   +D++    W   G  L   G   +A ++F+ VL  D
Sbjct: 270 LDYDKLDKKEDAIIS---YREVLVLDLYNAEAWFNLGVALEGTGNYFEAINSFEQVLLLD 326

Query: 159 RDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLG-IGLCRYKLGQLGKAR 217
            DN+ A   +  V    GR+ ++L  Y  AL+++P     I      +      Q  +  
Sbjct: 327 PDNIDAWHKKGLVLNKIGRFDEALVSYDSALKINPDNIAKIYTSNPAIASLNTSQFSECY 386

Query: 218 QAFQRALQLDPENVEALVALAVMDLQANEAA--GIRKGMEKMQRAFEIYPYCAMALNYLA 275
            A   +   D   +        + L   E A     K +E   +   ++   A+AL+ L 
Sbjct: 387 AAIP-SFNSDSAKIWYDKGTLYLGLSDYEEAVLSFEKVLELDSKHAVVWYKKALALDKLG 445

Query: 276 NHFFFTGQHFLVEQLTETALAVTN---HGPTKSHSYYNLARSYHSKGDYEKAGLYYMASV 332
           N+              E  +  T      P+  + +Y       + G Y++A   Y  +V
Sbjct: 446 NY-------------NEAIICYTEALRRDPSCPNVWYLKGYDLDTTGRYKEAVSCYRKTV 492

Query: 333 KEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQI 392
            E++   +F   +Y LG     + +   A+  +++V+E   D  +     G    +LG  
Sbjct: 493 -ELDP--QFTLAWYALGLDLAHMDEHSEAIAAYDQVIEQNSDFSDAYYRKGRTLDKLGLY 549

Query: 393 EKAQELLRKAAKIDPRDAQAFIDL------------GELLISSDTGAALDAFKTARTLLK 440
           + A E  R A  +D  ++ A   +               + S + G   D F+  + +  
Sbjct: 550 QDAIESYRVAISLDSSNSAASFQMEADISRVERLNHSSAIPSQNIGPIFDIFEIIKGMTG 609

Query: 441 KAGEEVPIEVLNN---IGVIH-------------FEKGEFESAHQSFKDAL 475
            +     I   NN   IGV+              F KG +E+A  S+  A+
Sbjct: 610 ISDYNAAIMEQNNVDLIGVVPDGYDAWVAKGGSLFVKGSYENALLSYNKAI 660



 Score = 40.8 bits (94), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 63/329 (19%), Positives = 131/329 (39%), Gaps = 57/329 (17%)

Query: 134 KGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHP 193
           +G  L+  G  ++A   + + L +D +   AL  +A  ++  G Y +++  Y   L++ P
Sbjct: 35  EGVALMLNGTYDKAIEKYDLALVSDPNYRIALENKAAAQYLYGDYDEAIATYDHILKLQP 94

Query: 194 SCPGAIRLGIGLCRYKLGQLGKARQAFQRAL-------------QLDPENVEALVALAVM 240
             P  I    G+   K G    A + + +AL                  N     A  + 
Sbjct: 95  GSP-LIFTKKGMVLAKKGDYENAIKTYDKALMSISKYILGNTLNDTSELNGSTSTAYIIE 153

Query: 241 DLQANEA------AGIRKGMEKMQRAFEIY-PYCAMALNYLANHFFFTGQHFLVEQLTET 293
           +L  +E+      A   +G+ + + A ++Y  +  + L + +   +  G     +  +E 
Sbjct: 154 ELGVDESMILYHKAKSLEGLGRNEEAIQLYEKFLEIQLEH-SMTLYEKGLDHARDGKSER 212

Query: 294 ALAVTNHG----PTKSHSYYNLARSYHSKGDYEKAGLYYMASVK---------------- 333
           A+ + +      P     +Y+  +++ S G YE+A   Y  +++                
Sbjct: 213 AIELYDEALQIDPDNRTIWYSKGQAFDSLGLYEEAIESYNKAIEFDSTDVKVWWNKALDY 272

Query: 334 -EINKPHEFIFPY--------------YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCET 378
            +++K  + I  Y              + LG      G++  A+ +FE+VL + PDN + 
Sbjct: 273 DKLDKKEDAIISYREVLVLDLYNAEAWFNLGVALEGTGNYFEAINSFEQVLLLDPDNIDA 332

Query: 379 LKALGHIYVQLGQIEKAQELLRKAAKIDP 407
               G +  ++G+ ++A      A KI+P
Sbjct: 333 WHKKGLVLNKIGRFDEALVSYDSALKINP 361


>gi|430744814|ref|YP_007203943.1| serine/threonine protein kinase [Singulisphaera acidiphila DSM 18658]
 gi|430016534|gb|AGA28248.1| serine/threonine protein kinase [Singulisphaera acidiphila DSM 18658]
          Length = 1199

 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 85/395 (21%), Positives = 168/395 (42%), Gaps = 60/395 (15%)

Query: 78   VRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQL 137
            +R +  A  N LG+     GK           F  A   Y +A  +D          G  
Sbjct: 690  LRPQSAAAHNVLGIALKVQGK-----------FGEAVASYERALTLDPKHVPAHCNLGGA 738

Query: 138  LLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPG 197
            L+A+ ++E+A++ F+  +  D ++ PA  G      ++G+  +++E  +RA+ +      
Sbjct: 739  LMAQQKLEEANARFRAAIALDPNSAPAHTGLGWALCDQGKLDEAVESGRRAIALDSKSAS 798

Query: 198  A-IRLGIGLCRYK-----------------------------LGQLGKARQA---FQRAL 224
            A   LG  L   K                             LG  GK  +A   ++ A 
Sbjct: 799  AHYNLGRALALQKKLDEAISCYRQAIALDPTFAKAHMNLGNELGNQGKWAEAVACYETAT 858

Query: 225  QLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQH 284
            QL+P++    ++L V   + ++   + + +  ++RA  + P      NY   H+      
Sbjct: 859  QLNPKDAVPHISLGVALSKQDK---LEEAVASLKRAISLDP------NYATAHYNLGVAL 909

Query: 285  FLVEQLTETALAVTNH---GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEF 341
               ++L E   ++       P  + ++YNL  +Y  +   ++A   Y  ++ E+N+   +
Sbjct: 910  SKQDKLDEAVASLKRTIALDPNYATAHYNLGNAYSEQRKLDEAVTSYRRAI-ELNR--NY 966

Query: 342  IFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRK 401
               +  LG   ++ G    A+T+F++V+E+  ++      LG    +L + ++A    R 
Sbjct: 967  TSAHLNLGNELIRQGKLVDAVTSFKRVIELDSNHARAHNQLGIALRRLKRWDEAVTAHRT 1026

Query: 402  AAKIDPRDAQAFIDLG-ELLISSDTGAALDAFKTA 435
            A K+DP+ A+A+ +LG  L    + G A+ ++K A
Sbjct: 1027 AIKLDPKYARAYHELGVTLQAQGELGEAITSYKRA 1061



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 52/203 (25%), Positives = 103/203 (50%), Gaps = 18/203 (8%)

Query: 70   EIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPS 129
            ++DE  A ++   IA+       +  LG   ++QR+ +E    A   Y +A  ++ +  S
Sbjct: 914  KLDEAVASLK-RTIALDPNYATAHYNLGNAYSEQRKLDE----AVTSYRRAIELNRNYTS 968

Query: 130  TWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPA--LLGQACVEFNRGRYSDSLEFYKR 187
              +  G  L+ +G++  A ++FK V+E D ++  A   LG A     R  + +++  ++ 
Sbjct: 969  AHLNLGNELIRQGKLVDAVTSFKRVIELDSNHARAHNQLGIALRRLKR--WDEAVTAHRT 1026

Query: 188  ALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVM-----DL 242
            A+++ P    A    +G+     G+LG+A  +++RA++L+P N E L  LA +     ++
Sbjct: 1027 AIKLDPKYARAYH-ELGVTLQAQGELGEAITSYKRAIELEPNNTERLADLAWLLATCGEV 1085

Query: 243  QANEAAGIRKGMEKMQRAFEIYP 265
            +  + AG    +E  QRA ++ P
Sbjct: 1086 KHRDPAG---AVELAQRAVDLSP 1105



 Score = 45.8 bits (107), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 73/337 (21%), Positives = 145/337 (43%), Gaps = 51/337 (15%)

Query: 113  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
            A +   +A  +D    S     G+ L  + ++++A S ++  +  D     A +      
Sbjct: 782  AVESGRRAIALDSKSASAHYNLGRALALQKKLDEAISCYRQAIALDPTFAKAHMNLGNEL 841

Query: 173  FNRGRYSDSLEFYKRALQVHP--SCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPEN 230
             N+G++++++  Y+ A Q++P  + P  I LG+ L   K  +L +A  + +RA+ LDP  
Sbjct: 842  GNQGKWAEAVACYETATQLNPKDAVP-HISLGVALS--KQDKLEEAVASLKRAISLDPNY 898

Query: 231  VEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQL 290
              A   L V   + ++   + + +  ++R   + P  A A   L N   ++ Q  L E +
Sbjct: 899  ATAHYNLGVALSKQDK---LDEAVASLKRTIALDPNYATAHYNLGN--AYSEQRKLDEAV 953

Query: 291  TETALAVT-NHGPTKSH------------------SY-------YNLARSYHSKG----- 319
            T    A+  N   T +H                  S+        N AR+++  G     
Sbjct: 954  TSYRRAIELNRNYTSAHLNLGNELIRQGKLVDAVTSFKRVIELDSNHARAHNQLGIALRR 1013

Query: 320  --DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCE 377
               +++A   +  ++K   K   +   Y+ LG      G+   A+T++++ +E+ P+N E
Sbjct: 1014 LKRWDEAVTAHRTAIKLDPK---YARAYHELGVTLQAQGELGEAITSYKRAIELEPNNTE 1070

Query: 378  TLKALGHIYVQLGQIE-----KAQELLRKAAKIDPRD 409
             L  L  +    G+++      A EL ++A  + P D
Sbjct: 1071 RLADLAWLLATCGEVKHRDPAGAVELAQRAVDLSPDD 1107


>gi|83719090|ref|YP_442157.1| TPR domain-containing protein [Burkholderia thailandensis E264]
 gi|83652915|gb|ABC36978.1| TPR domain protein [Burkholderia thailandensis E264]
          Length = 626

 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 71/278 (25%), Positives = 122/278 (43%), Gaps = 14/278 (5%)

Query: 142 GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 201
           G ++ A   ++  L  +  N  AL     +   +GR+ ++ +   RA+++ P+   A++L
Sbjct: 27  GRLDDAEHGYRAALATNPANADALHLFGVLRHQQGRHEEAADLVGRAVELRPND-AALQL 85

Query: 202 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIR--KGMEKMQR 259
            +G     LG+L  A + F+ AL L PE       LA  +L    AA  R    ++  QR
Sbjct: 86  NLGNAFKALGRLDDAIERFRNALTLAPE-----FPLAHYNLGNAYAAQERHDDAVDAFQR 140

Query: 260 AFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 319
           A  + P  A   N L N     G+H         AL +    P  + ++ NL  +  + G
Sbjct: 141 ALALAPGDASIHNNLGNALNALGRHGDALAAFRRALELR---PGHAGAHNNLGMALAALG 197

Query: 320 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 379
           D E+A  ++ A++    +   F+  ++ LG     +G    AL+ FE  L + P     L
Sbjct: 198 DTEEAIAHFRAALAAEPR---FVAAHFNLGNALDAVGRHAQALSAFESALALQPRFPLAL 254

Query: 380 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 417
             L +    LG+   A     +A  +DP    A+++LG
Sbjct: 255 FGLANALAALGRHRDALPHYERAVGLDPSFVLAWLNLG 292



 Score = 49.3 bits (116), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 98/236 (41%), Gaps = 18/236 (7%)

Query: 208 YKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQAN---EAAGIRKGMEKMQRAFEIY 264
           ++ G+L  A   ++ AL  +P N +AL    V+  Q     EAA +      + RA E+ 
Sbjct: 24  HRAGRLDDAEHGYRAALATNPANADALHLFGVLRHQQGRHEEAADL------VGRAVELR 77

Query: 265 PY-CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEK 323
           P   A+ LN L N F   G+   ++   E         P    ++YNL  +Y ++  ++ 
Sbjct: 78  PNDAALQLN-LGNAFKALGR---LDDAIERFRNALTLAPEFPLAHYNLGNAYAAQERHDD 133

Query: 324 AGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALG 383
           A   +  ++            +  LG     LG    AL  F + LE+ P +      LG
Sbjct: 134 AVDAFQRALALAPGDASI---HNNLGNALNALGRHGDALAAFRRALELRPGHAGAHNNLG 190

Query: 384 HIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGA-ALDAFKTARTL 438
                LG  E+A    R A   +PR   A  +LG  L +    A AL AF++A  L
Sbjct: 191 MALAALGDTEEAIAHFRAALAAEPRFVAAHFNLGNALDAVGRHAQALSAFESALAL 246



 Score = 48.1 bits (113), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 76/303 (25%), Positives = 122/303 (40%), Gaps = 20/303 (6%)

Query: 176 GRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV 235
           GR  D+   Y+ AL  +P+   A+ L  G+ R++ G+  +A     RA++L P +     
Sbjct: 27  GRLDDAEHGYRAALATNPANADALHL-FGVLRHQQGRHEEAADLVGRAVELRPNDA---- 81

Query: 236 ALAVMDLQANEAAG-IRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETA 294
           AL +    A +A G +   +E+ + A  + P   +A   L N +    +H       + A
Sbjct: 82  ALQLNLGNAFKALGRLDDAIERFRNALTLAPEFPLAHYNLGNAYAAQERHDDAVDAFQRA 141

Query: 295 LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLK 354
           LA+    P  +  + NL  + ++ G +  A L       E+   H     +  LG     
Sbjct: 142 LALA---PGDASIHNNLGNALNALGRHGDA-LAAFRRALELRPGHAGA--HNNLGMALAA 195

Query: 355 LGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFI 414
           LGD   A+ +F   L   P        LG+    +G+  +A      A  + PR   A  
Sbjct: 196 LGDTEEAIAHFRAALAAEPRFVAAHFNLGNALDAVGRHAQALSAFESALALQPRFPLALF 255

Query: 415 DLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLN--NIGVIHFEKGEFESAHQSFK 472
            L   L      AAL   + A    ++A    P  VL   N+G  H   G  E A ++F 
Sbjct: 256 GLANAL------AALGRHRDALPHYERAVGLDPSFVLAWLNLGTAHHALGAHEMALRAFD 309

Query: 473 DAL 475
            AL
Sbjct: 310 QAL 312



 Score = 44.3 bits (103), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 49/149 (32%), Positives = 66/149 (44%), Gaps = 16/149 (10%)

Query: 87  NALGVYYTYLGKIETKQREKEEHF--ILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEV 144
           N LG+    LG  E    E   HF   LA +    A+  ++         G  L A G  
Sbjct: 187 NNLGMALAALGDTE----EAIAHFRAALAAEPRFVAAHFNL---------GNALDAVGRH 233

Query: 145 EQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIG 204
            QA SAF+  L        AL G A      GR+ D+L  Y+RA+ + PS   A  L +G
Sbjct: 234 AQALSAFESALALQPRFPLALFGLANALAALGRHRDALPHYERAVGLDPSFVLAW-LNLG 292

Query: 205 LCRYKLGQLGKARQAFQRALQLDPENVEA 233
              + LG    A +AF +AL+LDP +  A
Sbjct: 293 TAHHALGAHEMALRAFDQALRLDPSHALA 321


>gi|145512772|ref|XP_001442298.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124409633|emb|CAK74901.1| unnamed protein product [Paramecium tetraurelia]
          Length = 1421

 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 75/311 (24%), Positives = 134/311 (43%), Gaps = 46/311 (14%)

Query: 135  GQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS 194
            G L   K +++ A+ +F  +L  +  +  AL+  A +   +G +  + ++ K AL+V P+
Sbjct: 1043 GTLYFKKKDLKSAAKSFITLLRINNKHPEALIEYATISSIQGNFEKAKKYLKYALKVSPN 1102

Query: 195  CPGA-IRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKG 253
             P A +RLG+ + + KL +L  A + FQ+   +DP N +A   +     Q  E   + +G
Sbjct: 1103 NPVANMRLGL-IYQTKLQELNSAIECFQQVAIVDPTNYKAYYYMGQCYFQKGE---LDEG 1158

Query: 254  MEKMQRAFE---------------IYPY--CAMALNY-----------------LANHFF 279
            +E M ++ +               +Y     A AL Y                 L N ++
Sbjct: 1159 IEYMNQSLKHNQSFGLAWKAVGNIMYEMNQPATALRYFQKAIDLDKNDMEAKIRLGNCYY 1218

Query: 280  FTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPH 339
               Q     Q+ E    +  +   + H    +A  Y+ K D+E+A L+Y  ++  IN   
Sbjct: 1219 LQDQFEQAIQIYEEISHLDQNEELEQH----MANCYYKKNDFEEAVLHYQRALS-INS-- 1271

Query: 340  EFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELL 399
            + I  YY LG     +  F  AL  FEKV++  P +        + +  L   E A +  
Sbjct: 1272 DKIECYYNLGDTYFTMEKFEEALECFEKVVKNDPQHSAAFYNYANTFFVLEDYENAAKYF 1331

Query: 400  RKAAKIDPRDA 410
             KA ++ P++ 
Sbjct: 1332 EKAIELQPQNV 1342



 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 88/412 (21%), Positives = 167/412 (40%), Gaps = 52/412 (12%)

Query: 46   IAREYFKQGKVEQF----RQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIET 101
            +AR Y K+G ++      +   E+ +S +   YY    Y +   L +    +  L +I  
Sbjct: 1008 LARAYEKKGDLDNAIKYGKLATEQPNSNQNSHYYLGTLYFKKKDLKSAAKSFITLLRINN 1067

Query: 102  KQREK----------EEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAK-GEVEQASSA 150
            K  E           + +F  A +Y   A ++  + P   +  G +   K  E+  A   
Sbjct: 1068 KHPEALIEYATISSIQGNFEKAKKYLKYALKVSPNNPVANMRLGLIYQTKLQELNSAIEC 1127

Query: 151  FKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 210
            F+ V   D  N  A        F +G   + +E+  ++L+ H    G     +G   Y++
Sbjct: 1128 FQQVAIVDPTNYKAYYYMGQCYFQKGELDEGIEYMNQSLK-HNQSFGLAWKAVGNIMYEM 1186

Query: 211  GQLGKARQAFQRALQLDPENVEALVALA---VMDLQANEAAGIRKGMEKMQRAFEIYPYC 267
             Q   A + FQ+A+ LD  ++EA + L     +  Q  +A  I + +  + +  E+  + 
Sbjct: 1187 NQPATALRYFQKAIDLDKNDMEAKIRLGNCYYLQDQFEQAIQIYEEISHLDQNEELEQHM 1246

Query: 268  AMALNYLANHF---------------------------FFTGQHFLVEQLTETALAVTNH 300
            A    Y  N F                           +FT + F  E+  E    V  +
Sbjct: 1247 ANCY-YKKNDFEEAVLHYQRALSINSDKIECYYNLGDTYFTMEKF--EEALECFEKVVKN 1303

Query: 301  GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRS 360
             P  S ++YN A ++    DYE A  Y+  +++   +P    +  Y + Q+ +K  D   
Sbjct: 1304 DPQHSAAFYNYANTFFVLEDYENAAKYFEKAIEL--QPQNVDWRNY-VAQLYIKKCDLNQ 1360

Query: 361  ALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQA 412
            A  + ++ + + P+N +TL    + Y Q+G  ++A +  ++   +D  + QA
Sbjct: 1361 AKRHLDESIRLQPNNPDTLAKYANYYYQIGNYQEALQKAKQTLVLDETNDQA 1412



 Score = 46.2 bits (108), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 96/405 (23%), Positives = 171/405 (42%), Gaps = 59/405 (14%)

Query: 112  LATQYYNKASRIDM---HEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQ 168
            +A QY  K + +D     E   W   G   +++ E ++A   F+I  +  +D V + L  
Sbjct: 844  IAKQYLLKVTEMDPLFEAENVNW-ALGTFFVSEKEWKKALHHFRICYQYSQDRVKSYLEI 902

Query: 169  ACVEFNRGRYSDSLEFYKRALQVHPS--CPGAIRLGIGLCRYKLGQLGKARQAFQRALQL 226
            A    N G    + + YKRA+  +     P      +G  + K  QL +      +A  L
Sbjct: 903  ARCYQNLGEVEKAEKTYKRAIDANNKDYLP---YYKLGQMQIKNKQLKEGIDNLSKAQTL 959

Query: 227  DPENVEALVAL--AVM----DLQANEAAGI--RKGM----------EKMQRAFEIYPYCA 268
            D +N++ ++ L  A+M    D  A + A I   KGM          + + RA+E      
Sbjct: 960  DYQNMDIIIKLGEALMIHDEDPTAIDQAVIVLHKGMIVDPLNQECTDALARAYEKKGDLD 1019

Query: 269  MALNY--LA---------NHFFFTGQHFLVEQLTETA------LAVTNHGPTKSHSYYNL 311
             A+ Y  LA         +H++    +F  + L   A      L + N  P     Y  +
Sbjct: 1020 NAIKYGKLATEQPNSNQNSHYYLGTLYFKKKDLKSAAKSFITLLRINNKHPEALIEYATI 1079

Query: 312  ARSYHSKGDYEKAGLYYMASVK-EINKPHEFIFPYYGLGQV-QLKLGDFRSALTNFEKVL 369
            +     +G++EKA  Y   ++K   N P         LG + Q KL +  SA+  F++V 
Sbjct: 1080 SSI---QGNFEKAKKYLKYALKVSPNNP----VANMRLGLIYQTKLQELNSAIECFQQVA 1132

Query: 370  EIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGA-A 428
             + P N +    +G  Y Q G++++  E + ++ K +     A+  +G ++   +  A A
Sbjct: 1133 IVDPTNYKAYYYMGQCYFQKGELDEGIEYMNQSLKHNQSFGLAWKAVGNIMYEMNQPATA 1192

Query: 429  LDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKD 473
            L  F+ A  L K       +E    +G  ++ + +FE A Q +++
Sbjct: 1193 LRYFQKAIDLDKND-----MEAKIRLGNCYYLQDQFEQAIQIYEE 1232


>gi|425436150|ref|ZP_18816588.1| Genome sequencing data, contig C313 [Microcystis aeruginosa PCC
           9432]
 gi|389679151|emb|CCH92011.1| Genome sequencing data, contig C313 [Microcystis aeruginosa PCC
           9432]
          Length = 569

 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 76/297 (25%), Positives = 135/297 (45%), Gaps = 27/297 (9%)

Query: 134 KGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHP 193
           +G  LLA GE E A SA++ VL  D ++V A +  A V  ++ RYS++L+ Y R   V+ 
Sbjct: 44  QGDRLLAAGEKESALSAYRTVLSFDENSVQAHIKIAQVLQSQKRYSEALQAYDRGFIVNH 103

Query: 194 SCP-----GAIRLGIGLCRYKLGQLGKARQAFQRALQLDPE-NVEALVALAVMDLQA-NE 246
             P         + +G    +  +  +A  A+Q+A+ + P    +  +  A+  LQ  +E
Sbjct: 104 KPPMEPSQSNYLVALGDIFAQEEKWSEAIDAYQKAMIIKPTFKAQFQLGKALYSLQRWDE 163

Query: 247 AAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG----P 302
           AA      + +Q A  + P    A       +F+ G+ +  +QL   A           P
Sbjct: 164 AA------KALQAAVFLDPSQGKA-------YFYLGKAYSEQQLWPEASYAYQQALELIP 210

Query: 303 TKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSAL 362
            +   Y  L  +   +G +++A   Y  ++    K  +    Y  LG+   + G    A+
Sbjct: 211 NQGEIYKKLGETLAKQGKWQEAEQIYRQALIYAPKDGDI---YNYLGKALAEQGKLGEAM 267

Query: 363 TNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGEL 419
             F++  +I P N +  + L +IY+  GQI++     R+A +IDP  ++A   L E+
Sbjct: 268 AVFQQARQISPKNAKIYQNLCYIYINNGQIDEGLNWCRQAVEIDPNLSEARFILQEI 324


>gi|118375025|ref|XP_001020699.1| TPR Domain containing protein [Tetrahymena thermophila]
 gi|89302466|gb|EAS00454.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
          Length = 318

 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 58/214 (27%), Positives = 98/214 (45%), Gaps = 12/214 (5%)

Query: 266 YCAMALNYLANHFFFT--GQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEK 323
           +C   LN L    F+    Q  ++E+ ++  L      P     Y  L R Y S  + E+
Sbjct: 14  FCKFNLNVLKLIVFWGIYHQQNMLEEASQFYLKALQIEPKNHEIYGQLGRVYESLNNLEQ 73

Query: 324 AGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALG 383
           A   Y+ ++  +NK    ++ Y  L  V  K+   + A  ++ K LEI+P+       LG
Sbjct: 74  ARQCYLNAIN-LNKFGPSVY-YNDLATVYFKMNMLKEAKASYLKALEIFPEQPYCYNGLG 131

Query: 384 HIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAG 443
            +Y QL  +++++E  +KA +I P    A+I+LG L    +          A+   +KA 
Sbjct: 132 LVYQQLSMLKQSKECFQKALEIYPNYVSAYINLGNLFYQQNL------LTEAKQQFEKAL 185

Query: 444 EEVPIE--VLNNIGVIHFEKGEFESAHQSFKDAL 475
           +  P++   L N+G I+ +    E A Q F  AL
Sbjct: 186 QLDPLDYKCLYNLGNIYIDMQMLEDAKQYFLKAL 219



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 64/244 (26%), Positives = 112/244 (45%), Gaps = 20/244 (8%)

Query: 176 GRYSDSL-------EFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDP 228
           GR  +SL       + Y  A+ ++   P      +    +K+  L +A+ ++ +AL++ P
Sbjct: 62  GRVYESLNNLEQARQCYLNAINLNKFGPSVYYNDLATVYFKMNMLKEAKASYLKALEIFP 121

Query: 229 ENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVE 288
           E       L ++     + + +++  E  Q+A EIYP    A   L N F+   Q+ L E
Sbjct: 122 EQPYCYNGLGLV---YQQLSMLKQSKECFQKALEIYPNYVSAYINLGNLFY--QQNLLTE 176

Query: 289 --QLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYY 346
             Q  E AL +    P      YNL   Y      E A  Y++ ++ EIN   +++  + 
Sbjct: 177 AKQQFEKALQL---DPLDYKCLYNLGNIYIDMQMLEDAKQYFLKAL-EINP--QYVNGHN 230

Query: 347 GLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKID 406
            LG V + +  F+ A   F K LEI P + ++   L  +Y     +E+AQ+   KA +I+
Sbjct: 231 NLGLVYIDMKMFQQAKQCFLKALEIDPTSYKSYAYLAELYAHQEMLEEAQQCFLKALQIN 290

Query: 407 PRDA 410
           P+ +
Sbjct: 291 PQSS 294



 Score = 42.7 bits (99), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 67/296 (22%), Positives = 112/296 (37%), Gaps = 53/296 (17%)

Query: 183 EFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVA-LAVMD 241
           +FY +ALQ+ P     I   +G     L  L +ARQ +  A+ L+          LA + 
Sbjct: 42  QFYLKALQIEPK-NHEIYGQLGRVYESLNNLEQARQCYLNAINLNKFGPSVYYNDLATVY 100

Query: 242 LQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG 301
            + N     +    K    F   PYC            + G   + +QL+          
Sbjct: 101 FKMNMLKEAKASYLKALEIFPEQPYC------------YNGLGLVYQQLSMLK------- 141

Query: 302 PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSA 361
                          SK  ++KA   Y         P+ ++  Y  LG +  +      A
Sbjct: 142 --------------QSKECFQKALEIY---------PN-YVSAYINLGNLFYQQNLLTEA 177

Query: 362 LTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLI 421
              FEK L++ P + + L  LG+IY+ +  +E A++   KA +I+P+      +LG + I
Sbjct: 178 KQQFEKALQLDPLDYKCLYNLGNIYIDMQMLEDAKQYFLKALEINPQYVNGHNNLGLVYI 237

Query: 422 SSDTGAALDAFKTARTLLKKAGEEVPIEVLN--NIGVIHFEKGEFESAHQSFKDAL 475
                  +  F+ A+    KA E  P    +   +  ++  +   E A Q F  AL
Sbjct: 238 D------MKMFQQAKQCFLKALEIDPTSYKSYAYLAELYAHQEMLEEAQQCFLKAL 287


>gi|254417224|ref|ZP_05030969.1| tetratricopeptide repeat domain protein [Coleofasciculus
           chthonoplastes PCC 7420]
 gi|196176030|gb|EDX71049.1| tetratricopeptide repeat domain protein [Coleofasciculus
           chthonoplastes PCC 7420]
          Length = 600

 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 74/306 (24%), Positives = 134/306 (43%), Gaps = 18/306 (5%)

Query: 104 REKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVP 163
           R   E +  A   +N+A +I+    + +  +G      G+ + A + F   ++ + D   
Sbjct: 287 RSDLEDYQGAIADFNQAIQINPDYANAYYNRGNARSDLGDDQGAIADFNQAIQLNPDFAY 346

Query: 164 ALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRA 223
           A   +     N G Y +++  + +A+Q++P    A     GL R  LG    A   + +A
Sbjct: 347 AYYNRGNARSNLGDYEEAIADFAQAIQLNPDDATAY-YNRGLARSDLGDDQGAIADYNQA 405

Query: 224 LQLDPENVEALV--ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNY--LANHFF 279
           +Q++P+   A     LA  +L  ++ A     +    +A +I P  A A N   LA    
Sbjct: 406 IQINPDLAAAYNNRGLARSNLGDDQGA-----LADYNQAIQINPDLAAAYNNRGLARSDL 460

Query: 280 FTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPH 339
              Q  + +     A+ +    P  + +YYN   +  + GDY+ A   +  ++K IN P 
Sbjct: 461 GDYQEAIAD--FNQAIKIN---PDDADAYYNRGNARSNLGDYQGAIADFTQAIK-IN-PG 513

Query: 340 EFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELL 399
           +    YY  G  +  LGD++ A+ ++ + +++ PD        G  Y  LG   KA E  
Sbjct: 514 D-ADAYYNRGNARSDLGDYQGAIADYNQAIKLNPDYAAAYGNRGLAYRDLGDKPKALEDF 572

Query: 400 RKAAKI 405
           R+AA +
Sbjct: 573 RQAATL 578



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 78/370 (21%), Positives = 150/370 (40%), Gaps = 36/370 (9%)

Query: 117 YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 176
           Y +A +++  +   +  +G      G+ E+A + F   ++ + D+  A   +     + G
Sbjct: 130 YTQAIQLNPDDAIAYNNRGLARSNLGDYEEAIADFAQAIQLNPDDATAYYNRGLARSDLG 189

Query: 177 RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV- 235
            Y  ++  Y +A++++P    A     G  R  L     A   + +A+QL+P++ +A   
Sbjct: 190 DYQGAIADYTQAIKINPDYADAYN-NRGNARSNLEDYQGAIADYTQAIQLNPDDAKAYSN 248

Query: 236 -ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETA 294
              A  DL+  + A     +    +A +I P  A A N          +      L +  
Sbjct: 249 RGAARSDLEDYQGA-----IADFNQAIQINPDFAYAYN---------NRGVARSDLEDYQ 294

Query: 295 LAVTNHG------PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKE-INKPHEFIFPYYG 347
            A+ +        P  +++YYN   +    GD + A    +A   + I    +F + YY 
Sbjct: 295 GAIADFNQAIQINPDYANAYYNRGNARSDLGDDQGA----IADFNQAIQLNPDFAYAYYN 350

Query: 348 LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 407
            G  +  LGD+  A+ +F + +++ PD+       G     LG  + A     +A +I+P
Sbjct: 351 RGNARSNLGDYEEAIADFAQAIQLNPDDATAYYNRGLARSDLGDDQGAIADYNQAIQINP 410

Query: 408 RDAQAFIDLG--ELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFE 465
             A A+ + G     +  D GA  D  +  +     A         NN G+   + G+++
Sbjct: 411 DLAAAYNNRGLARSNLGDDQGALADYNQAIQINPDLAA------AYNNRGLARSDLGDYQ 464

Query: 466 SAHQSFKDAL 475
            A   F  A+
Sbjct: 465 EAIADFNQAI 474



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 73/324 (22%), Positives = 139/324 (42%), Gaps = 22/324 (6%)

Query: 108 EHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLG 167
           E++  A   +N+A +I+      +  +G      G+ + A + +   ++ + D+  A   
Sbjct: 87  ENYQGAIADFNQAIKINPDYAIAYYNRGLARSNLGDYQGAIADYTQAIQLNPDDAIAYNN 146

Query: 168 QACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLD 227
           +     N G Y +++  + +A+Q++P    A     GL R  LG    A   + +A++++
Sbjct: 147 RGLARSNLGDYEEAIADFAQAIQLNPDDATAY-YNRGLARSDLGDYQGAIADYTQAIKIN 205

Query: 228 PENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYL-ANHFFFTGQHFL 286
           P+  +A           N     R  +E  Q A   Y   A+ LN   A  +   G    
Sbjct: 206 PDYADAY----------NNRGNARSNLEDYQGAIADYT-QAIQLNPDDAKAYSNRGAARS 254

Query: 287 VEQLTETALAVTNHG----PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFI 342
             +  + A+A  N      P  +++Y N   +     DY+ A   +  ++ +IN   ++ 
Sbjct: 255 DLEDYQGAIADFNQAIQINPDFAYAYNNRGVARSDLEDYQGAIADFNQAI-QINP--DYA 311

Query: 343 FPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKA 402
             YY  G  +  LGD + A+ +F + +++ PD        G+    LG  E+A     +A
Sbjct: 312 NAYYNRGNARSDLGDDQGAIADFNQAIQLNPDFAYAYYNRGNARSNLGDYEEAIADFAQA 371

Query: 403 AKIDPRDAQAFIDLGELLISSDTG 426
            +++P DA A+ + G  L  SD G
Sbjct: 372 IQLNPDDATAYYNRG--LARSDLG 393



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 72/320 (22%), Positives = 127/320 (39%), Gaps = 54/320 (16%)

Query: 104 REKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSA---FKIVLEADRD 160
           R   E +  A   +N+A +I+      +  +G   +A+ ++E    A   F   ++ + D
Sbjct: 253 RSDLEDYQGAIADFNQAIQINPDFAYAYNNRG---VARSDLEDYQGAIADFNQAIQINPD 309

Query: 161 NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAF 220
              A   +     + G    ++  + +A+Q++P    A     G  R  LG   +A   F
Sbjct: 310 YANAYYNRGNARSDLGDDQGAIADFNQAIQLNPDFAYAY-YNRGNARSNLGDYEEAIADF 368

Query: 221 QRALQLDPENVEALV--ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHF 278
            +A+QL+P++  A     LA  DL  ++ A     +    +A +I P  A A N      
Sbjct: 369 AQAIQLNPDDATAYYNRGLARSDLGDDQGA-----IADYNQAIQINPDLAAAYN------ 417

Query: 279 FFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKP 338
                               N G  +S    NL     +  DY +A         +IN  
Sbjct: 418 --------------------NRGLARS----NLGDDQGALADYNQA--------IQINP- 444

Query: 339 HEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQEL 398
            +    Y   G  +  LGD++ A+ +F + ++I PD+ +     G+    LG  + A   
Sbjct: 445 -DLAAAYNNRGLARSDLGDYQEAIADFNQAIKINPDDADAYYNRGNARSNLGDYQGAIAD 503

Query: 399 LRKAAKIDPRDAQAFIDLGE 418
             +A KI+P DA A+ + G 
Sbjct: 504 FTQAIKINPGDADAYYNRGN 523



 Score = 49.3 bits (116), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 34/125 (27%), Positives = 62/125 (49%), Gaps = 5/125 (4%)

Query: 302 PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSA 361
           P  +  YY  A +Y+   +Y+ A   +  ++K IN   ++   YY  G  +  LGD++ A
Sbjct: 70  PNNAEVYYLRANAYYQLENYQGAIADFNQAIK-INP--DYAIAYYNRGLARSNLGDYQGA 126

Query: 362 LTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLI 421
           + ++ + +++ PD+       G     LG  E+A     +A +++P DA A+ + G  L 
Sbjct: 127 IADYTQAIQLNPDDAIAYNNRGLARSNLGDYEEAIADFAQAIQLNPDDATAYYNRG--LA 184

Query: 422 SSDTG 426
            SD G
Sbjct: 185 RSDLG 189



 Score = 47.0 bits (110), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 77/353 (21%), Positives = 141/353 (39%), Gaps = 62/353 (17%)

Query: 128 PSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKR 187
           P+  +G   +L+      Q + A   ++ A +  V  L+  A ++  +G Y  ++  Y +
Sbjct: 9   PAALIGTAIVLVQP----QFAVALTNLVVAQQPTVQNLINSARIKAEKGDYQGAIADYNQ 64

Query: 188 ALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEA 247
           ALQ+ P+      L      Y+L     A   F +A++++P+   A     +        
Sbjct: 65  ALQLSPNNAEVYYLRAN-AYYQLENYQGAIADFNQAIKINPDYAIAYYNRGLA------- 116

Query: 248 AGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHS 307
              R  +   Q A   Y   A+ LN                   + A+A  N G      
Sbjct: 117 ---RSNLGDYQGAIADYT-QAIQLN------------------PDDAIAYNNRG------ 148

Query: 308 YYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEK 367
              LARS  + GDYE+A +   A   ++N P +    YY  G  +  LGD++ A+ ++ +
Sbjct: 149 ---LARS--NLGDYEEA-IADFAQAIQLN-PDDAT-AYYNRGLARSDLGDYQGAIADYTQ 200

Query: 368 VLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGA 427
            ++I PD  +     G+    L   + A     +A +++P DA+A+         S+ GA
Sbjct: 201 AIKINPDYADAYNNRGNARSNLEDYQGAIADYTQAIQLNPDDAKAY---------SNRGA 251

Query: 428 ALDAFKTARTLLKKAGEEVPIE-----VLNNIGVIHFEKGEFESAHQSFKDAL 475
           A    +  +  +    + + I        NN GV   +  +++ A   F  A+
Sbjct: 252 ARSDLEDYQGAIADFNQAIQINPDFAYAYNNRGVARSDLEDYQGAIADFNQAI 304


>gi|389581569|ref|ZP_10171596.1| tetratricopeptide repeat protein [Desulfobacter postgatei 2ac9]
 gi|389403204|gb|EIM65426.1| tetratricopeptide repeat protein [Desulfobacter postgatei 2ac9]
          Length = 334

 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 81/338 (23%), Positives = 145/338 (42%), Gaps = 54/338 (15%)

Query: 141 KGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIR 200
           +G    A   ++  L  DR++V AL     +    G + +++   +RA+ V P    A  
Sbjct: 24  QGNRRAAEHEYRRALHVDRNHVSALNNLGFLLIETGAFEEAVLLLQRAIGVVPENEDAYN 83

Query: 201 LGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVM-DLQANEAAGIRKGMEKMQR 259
             +GL  ++L Q  +A++AF+ A++ +P +  A   L V+   + N  A +         
Sbjct: 84  -NLGLAYFQLEQHERAQRAFETAIRYNPSHHSASFNLGVLYQSRGNWGAAV--------- 133

Query: 260 AFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 319
             + Y       N+L NH                        P    + YNLA +Y++ G
Sbjct: 134 --DTYK------NHLRNH------------------------PRHPEALYNLAVAYNALG 161

Query: 320 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 379
             ++A  YY  ++K+     + +     LGQ+ L+      AL   E+ LEI P++   L
Sbjct: 162 MLDQAETYYHLAIKQSGANADALV---NLGQLYLRKRQADRALAVLERALEIEPEHPLGL 218

Query: 380 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLL 439
             L  ++V   + ++A+ LL K     P    A  +L  +       A L     A TLL
Sbjct: 219 YNLALVWVTKKKPDRAKPLLAKVVAKRPDYIPAISNLAMIC------AELADPDEAHTLL 272

Query: 440 KKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDAL 475
           ++A +  P    +L N+GV+  ++G  ++A ++F   L
Sbjct: 273 RRALDLAPSTPTLLFNLGVVEAKQGNRDAAIEAFSKVL 310



 Score = 46.2 bits (108), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 54/230 (23%), Positives = 99/230 (43%), Gaps = 10/230 (4%)

Query: 145 EQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIG 204
           E+A  AF+  +  +  +  A      +  +RG +  +++ YK  L+ HP  P A+   + 
Sbjct: 96  ERAQRAFETAIRYNPSHHSASFNLGVLYQSRGNWGAAVDTYKNHLRNHPRHPEAL-YNLA 154

Query: 205 LCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIY 264
           +    LG L +A   +  A++    N +ALV L  + L+  +A    + +  ++RA EI 
Sbjct: 155 VAYNALGMLDQAETYYHLAIKQSGANADALVNLGQLYLRKRQA---DRALAVLERALEIE 211

Query: 265 PYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 324
           P   + L  LA  +    +    + L    +A     P    +  NLA       D ++A
Sbjct: 212 PEHPLGLYNLALVWVTKKKPDRAKPLLAKVVAKR---PDYIPAISNLAMICAELADPDEA 268

Query: 325 GLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPD 374
                 ++         +F    LG V+ K G+  +A+  F KVL++ P+
Sbjct: 269 HTLLRRALDLAPSTPTLLF---NLGVVEAKQGNRDAAIEAFSKVLDLEPE 315



 Score = 45.8 bits (107), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 68/277 (24%), Positives = 110/277 (39%), Gaps = 17/277 (6%)

Query: 347 GLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKID 406
            LG + ++ G F  A+   ++ + + P+N +    LG  Y QL Q E+AQ     A + +
Sbjct: 50  NLGFLLIETGAFEEAVLLLQRAIGVVPENEDAYNNLGLAYFQLEQHERAQRAFETAIRYN 109

Query: 407 PRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFE 465
           P    A  +LG L  S  + GAA+D +K     L+        E L N+ V +   G  +
Sbjct: 110 PSHHSASFNLGVLYQSRGNWGAAVDTYKNH---LRNHPRHP--EALYNLAVAYNALGMLD 164

Query: 466 SAHQSFKDALG-DGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNK 524
            A   +  A+   G     L +  + Y+    A     + + +  R       +E+    
Sbjct: 165 QAETYYHLAIKQSGANADALVNLGQLYLRKRQAD----RALAVLERA------LEIEPEH 214

Query: 525 VTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNE 584
              L+NLA +         A  L   ++ K  DY+ A   LA I     +   +  L+  
Sbjct: 215 PLGLYNLALVWVTKKKPDRAKPLLAKVVAKRPDYIPAISNLAMICAELADPDEAHTLLRR 274

Query: 585 ALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASD 621
           AL +    P  L  LG +E K  +   A E F    D
Sbjct: 275 ALDLAPSTPTLLFNLGVVEAKQGNRDAAIEAFSKVLD 311


>gi|158522429|ref|YP_001530299.1| hypothetical protein Dole_2418 [Desulfococcus oleovorans Hxd3]
 gi|158511255|gb|ABW68222.1| Tetratricopeptide TPR_2 repeat protein [Desulfococcus oleovorans
           Hxd3]
          Length = 827

 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 77/310 (24%), Positives = 138/310 (44%), Gaps = 30/310 (9%)

Query: 174 NRGRYSDSLEFYKRALQVHPSCPGAIRL--GIGLCRYKLGQLGKARQAFQRALQLDPENV 231
           N+G+   ++  Y RA+++ P   G I     +G    + GQ  KAR   ++A++ DP  +
Sbjct: 436 NQGQTDQAMAMYNRAIEIDP---GYIHPYNNLGALFLETGQPEKARPLLEKAIETDPLFM 492

Query: 232 EAL--VALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQ 289
            A   +A+A   L  +EAA     M   ++  +I P      N L       G   L ++
Sbjct: 493 MAYSNLAIACHRLGDSEAA-----MAWCEKGLQISPNDLEIQNTL-------GVILLAQR 540

Query: 290 LTETAL----AVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 345
             + A     AV    P  + +  NLA     +GD EK       +++      E     
Sbjct: 541 REQEAAVLFEAVLQKDPGHTEALMNLALIADKQGDREKTAALLEKAIRLDPASAE---AR 597

Query: 346 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKI 405
           Y LG++  + G+  +A+   E+ L + PD+     A+G++++Q G+ ++A +  +KA  I
Sbjct: 598 YHLGELLARTGNPDNAMAQLEQALHLKPDHALAHNAMGNLWLQAGKTDRAIDHYQKAIAI 657

Query: 406 DPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFE 465
           DP  A A  +L + L+   TG    A     T+     ++    +L   G++H + G   
Sbjct: 658 DPGFAAAHTNLADALVR--TGKIDSALHYLETVAASRPDDA--GLLLKTGILHQQNGNLP 713

Query: 466 SAHQSFKDAL 475
           +A   ++ AL
Sbjct: 714 AAENLYQKAL 723



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 96/376 (25%), Positives = 151/376 (40%), Gaps = 34/376 (9%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
           A   YN+A  ID      +   G L L  G+ E+A    +  +E D   + A    A   
Sbjct: 443 AMAMYNRAIEIDPGYIHPYNNLGALFLETGQPEKARPLLEKAIETDPLFMMAYSNLAIAC 502

Query: 173 FNRGRYSDSLEFYKRALQVHPS-CPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENV 231
              G    ++ + ++ LQ+ P+       LG+ L   +  Q  +A   F+  LQ DP + 
Sbjct: 503 HRLGDSEAAMAWCEKGLQISPNDLEIQNTLGVILLAQRREQ--EAAVLFEAVLQKDPGHT 560

Query: 232 EALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLT 291
           EAL+ LA++   A++     K    +++A  + P  A A  +L      TG         
Sbjct: 561 EALMNLALI---ADKQGDREKTAALLEKAIRLDPASAEARYHLGELLARTGNPDNAMAQL 617

Query: 292 ETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQV 351
           E AL +    P  + ++  +   +   G  ++A  +Y    K I     F   +  L   
Sbjct: 618 EQALHLK---PDHALAHNAMGNLWLQAGKTDRAIDHYQ---KAIAIDPGFAAAHTNLADA 671

Query: 352 QLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQ 411
            ++ G   SAL   E V    PD+   L   G ++ Q G +  A+ L +KA  IDP    
Sbjct: 672 LVRTGKIDSALHYLETVAASRPDDAGLLLKTGILHQQNGNLPAAENLYQKALSIDPGCTA 731

Query: 412 AFIDLGELLISSDTGAALDAFKTARTLLKKAG--EEVPIEVLNNIGVIHFE-------KG 462
               LG  +I +  G           L K AG  EE+ + V +N  VIH+        + 
Sbjct: 732 CLNRLG--MIHAQAG----------RLDKAAGCFEELALLVPDN-PVIHYNLACLYARQN 778

Query: 463 EFESAHQSFKDALGDG 478
           E E A  + K AL  G
Sbjct: 779 EVEPALTNLKKALDTG 794



 Score = 40.8 bits (94), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 23/73 (31%), Positives = 36/73 (49%)

Query: 344 PYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAA 403
           P+  LG      G    A+  + + +EI P        LG ++++ GQ EKA+ LL KA 
Sbjct: 426 PWNNLGLALKNQGQTDQAMAMYNRAIEIDPGYIHPYNNLGALFLETGQPEKARPLLEKAI 485

Query: 404 KIDPRDAQAFIDL 416
           + DP    A+ +L
Sbjct: 486 ETDPLFMMAYSNL 498


>gi|443669694|ref|ZP_21134889.1| hypothetical protein C789_5429, partial [Microcystis aeruginosa
           DIANCHI905]
 gi|443330030|gb|ELS44783.1| hypothetical protein C789_5429, partial [Microcystis aeruginosa
           DIANCHI905]
          Length = 597

 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 82/348 (23%), Positives = 155/348 (44%), Gaps = 60/348 (17%)

Query: 155 LEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLG-------IGLCR 207
           L  + D V +L   A + +  G Y  +LEF +++L +        R G       +G   
Sbjct: 271 LNLELDLVASLNSLAGIYYCLGEYQKALEFCQQSLAITREI--GDRGGEAKSYNNLGNVY 328

Query: 208 YKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYC 267
           Y LG+  KA +  Q++L +  E                   G RKG              
Sbjct: 329 YSLGEYQKALEFHQQSLAITRE------------------IGDRKGE------------- 357

Query: 268 AMALNYLANHFFFTGQHFLVEQLTETALAVTNH-GPTK--SHSYYNLARSYHSKGDYEKA 324
           A + N L N ++  G++    +  + +LA+T   G  K  ++SY NL   Y+S G+Y+KA
Sbjct: 358 ANSYNNLGNVYYSLGEYQKAIEFYQQSLAITREIGDRKGEANSYNNLGNVYYSLGEYQKA 417

Query: 325 GLYY---MASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPD------N 375
             +Y   +A ++EI         Y  LG V   LG+++ A+  +++ L I  +       
Sbjct: 418 IEFYQQSLAILREIGDRWGEAASYNNLGNVYYSLGEYQKAIEFYQQSLAITREIGDRKGE 477

Query: 376 CETLKALGHIYVQLGQIEKAQELLRKAAKIDPR------DAQAFIDLGELLIS-SDTGAA 428
             +   LG++Y  LG+ +KA E  +++  I         +A +++ LG +  S  +   A
Sbjct: 478 ANSYNNLGNVYYSLGEYQKAIEFYQQSLAITREIGNRGGEANSYMGLGNVYDSLGEYQKA 537

Query: 429 LDAFKTARTLLKKAGEE-VPIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
           ++ ++ +  + ++ G   V  +  NN+G +++  GE++ A +  + +L
Sbjct: 538 IEFYQQSLAITREIGNRGVEAKSYNNLGAVYYSLGEYQKAIEFHQQSL 585



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 67/272 (24%), Positives = 121/272 (44%), Gaps = 48/272 (17%)

Query: 171 VEFNRGRYSDSLEFYKRALQVHPSCPGAIRLG-------IGLCRYKLGQLGKARQAFQRA 223
           V ++ G Y  +LEF++++L +        R G       +G   Y LG+  KA + +Q++
Sbjct: 327 VYYSLGEYQKALEFHQQSLAITREI--GDRKGEANSYNNLGNVYYSLGEYQKAIEFYQQS 384

Query: 224 LQLDPENVEALVALAVMDLQA-----NEAAGIRKGMEKMQRAFEIYPYC----------- 267
           L +  E         + D +      N    +   + + Q+A E Y              
Sbjct: 385 LAITRE---------IGDRKGEANSYNNLGNVYYSLGEYQKAIEFYQQSLAILREIGDRW 435

Query: 268 --AMALNYLANHFFFTGQHFLVEQLTETALAVTNH-GPTK--SHSYYNLARSYHSKGDYE 322
             A + N L N ++  G++    +  + +LA+T   G  K  ++SY NL   Y+S G+Y+
Sbjct: 436 GEAASYNNLGNVYYSLGEYQKAIEFYQQSLAITREIGDRKGEANSYNNLGNVYYSLGEYQ 495

Query: 323 KAGLYY---MASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPD----- 374
           KA  +Y   +A  +EI         Y GLG V   LG+++ A+  +++ L I  +     
Sbjct: 496 KAIEFYQQSLAITREIGNRGGEANSYMGLGNVYDSLGEYQKAIEFYQQSLAITREIGNRG 555

Query: 375 -NCETLKALGHIYVQLGQIEKAQELLRKAAKI 405
              ++   LG +Y  LG+ +KA E  +++  I
Sbjct: 556 VEAKSYNNLGAVYYSLGEYQKAIEFHQQSLAI 587



 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 71/299 (23%), Positives = 137/299 (45%), Gaps = 49/299 (16%)

Query: 216 ARQAFQRALQLDPE-NVEALVALAVMDLQA--NEAAGIRKGMEKMQRAFEIYPYCAMAL- 271
           A + +Q+A+ L  E N+E       +DL A  N  AGI   + + Q+A E   +C  +L 
Sbjct: 257 AIEYYQKAIDLQKELNLE-------LDLVASLNSLAGIYYCLGEYQKALE---FCQQSLA 306

Query: 272 ---------------NYLANHFFFTGQHFLVEQLTETALAVTNH-GPTK--SHSYYNLAR 313
                          N L N ++  G++    +  + +LA+T   G  K  ++SY NL  
Sbjct: 307 ITREIGDRGGEAKSYNNLGNVYYSLGEYQKALEFHQQSLAITREIGDRKGEANSYNNLGN 366

Query: 314 SYHSKGDYEKAGLYY---MASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLE 370
            Y+S G+Y+KA  +Y   +A  +EI         Y  LG V   LG+++ A+  +++ L 
Sbjct: 367 VYYSLGEYQKAIEFYQQSLAITREIGDRKGEANSYNNLGNVYYSLGEYQKAIEFYQQSLA 426

Query: 371 IYPD------NCETLKALGHIYVQLGQIEKAQELLRKAAKIDPR------DAQAFIDLGE 418
           I  +         +   LG++Y  LG+ +KA E  +++  I         +A ++ +LG 
Sbjct: 427 ILREIGDRWGEAASYNNLGNVYYSLGEYQKAIEFYQQSLAITREIGDRKGEANSYNNLGN 486

Query: 419 LLIS-SDTGAALDAFKTARTLLKKAGEE-VPIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
           +  S  +   A++ ++ +  + ++ G           +G ++   GE++ A + ++ +L
Sbjct: 487 VYYSLGEYQKAIEFYQQSLAITREIGNRGGEANSYMGLGNVYDSLGEYQKAIEFYQQSL 545


>gi|291569288|dbj|BAI91560.1| TPR domain protein [Arthrospira platensis NIES-39]
          Length = 917

 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 57/241 (23%), Positives = 109/241 (45%), Gaps = 10/241 (4%)

Query: 174 NRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEA 233
           N G + +++ FY++A+ + P+    +   +G+  +  G +  A   +Q+A+ L+P+  EA
Sbjct: 84  NMGWFDEAISFYQQAIDLSPNW-ADLHYHLGMTWHWQGNIEGAIGCYQKAIALNPKLGEA 142

Query: 234 LVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTET 293
            + +A   L+ NE   I   ++ +Q+     P      N L    +   Q   +++    
Sbjct: 143 YLDMA---LRLNERGDINTAIKVLQQGRINCPNFKEIFNTLG---YLQLQQNQIDEAIAI 196

Query: 294 ALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQL 353
                +  PT+   Y NL  ++  +G   +A   Y    K I+   +    Y  LG++  
Sbjct: 197 FQEALSIDPTEPLVYNNLGWAFARQGKLSEAIAAYH---KAISLKPDLAIAYSNLGKLWQ 253

Query: 354 KLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAF 413
              + R A+T F+K + I PDN       G+  + +G + +A    +KA  IDP+  Q +
Sbjct: 254 HKNNHRQAITYFQKAIAIEPDNIMFYSDCGNSCLIIGCLSQAMACFQKAIAIDPKFVQGY 313

Query: 414 I 414
           I
Sbjct: 314 I 314


>gi|223937044|ref|ZP_03628952.1| TPR repeat-containing protein [bacterium Ellin514]
 gi|223894325|gb|EEF60778.1| TPR repeat-containing protein [bacterium Ellin514]
          Length = 466

 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 77/347 (22%), Positives = 152/347 (43%), Gaps = 16/347 (4%)

Query: 134 KGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHP 193
           +G L   KGEVE+A S +   ++ +  +  A   +A     +G    ++  Y +A+Q++P
Sbjct: 100 RGNLYDQKGEVEKAISDYTEAIKLNPKDAWAYAKRAADYHKKGDSEKAISDYTQAIQINP 159

Query: 194 SCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKG 253
                     G          KA   + + ++L+P+ V A  +  +      +   + K 
Sbjct: 160 KDANYYD-SRGRAYAMKRDWDKAIADYDQVVKLNPKQVSAYNSRGLAYAMKGD---MDKA 215

Query: 254 MEKMQRAFEIYPYCAMALNYLANHFFFTGQ-HFLVEQLTETALAVTNHGPTKSHSYYNLA 312
           +  +    ++ P  A A       +   G     V   +E    +    PT S  Y + A
Sbjct: 216 IRDLSEVIKLNPKDAPAYGSRGLSYAMKGDWDKAVSDFSE----LIKLKPTDSIGYDSRA 271

Query: 313 RSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIY 372
            +Y ++G  ++A   +  ++K +N      F   GL  + +  GD+  A+ NF K +++ 
Sbjct: 272 TAYQNQGKLDEALADFSEAIK-LNDKDAGAFHNRGL--IYVGKGDWEKAIENFSKSIQLN 328

Query: 373 PDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAF 432
           P + +     G+ Y Q G+ +K  + + +A +++P+DA+++ +L     +    A++   
Sbjct: 329 PQDADAFAKRGYAYYQKGEYQKGIDDINEALRLNPKDAESYNNLAWFRATC-PDASMRKG 387

Query: 433 KTARTLLKKAGEEVPIEVLNNIGVI---HFEKGEFESAHQSFKDALG 476
           K A    KKA E    +  + IG +   + E G+FE A +  K A+G
Sbjct: 388 KEAVEAGKKACELTNWKEWHCIGTLAAAYAETGDFEQAVKYQKQAMG 434



 Score = 44.3 bits (103), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 54/253 (21%), Positives = 107/253 (42%), Gaps = 24/253 (9%)

Query: 81  ERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLA 140
           ++++  N+ G+ Y   G ++   R+  E             +++  +   +  +G     
Sbjct: 194 KQVSAYNSRGLAYAMKGDMDKAIRDLSEVI-----------KLNPKDAPAYGSRGLSYAM 242

Query: 141 KGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIR 200
           KG+ ++A S F  +++    +      +A    N+G+  ++L  +  A++++    GA  
Sbjct: 243 KGDWDKAVSDFSELIKLKPTDSIGYDSRATAYQNQGKLDEALADFSEAIKLNDKDAGAFH 302

Query: 201 LGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRA 260
              GL     G   KA + F +++QL+P++ +A         Q  E    +KG++ +  A
Sbjct: 303 -NRGLIYVGKGDWEKAIENFSKSIQLNPQDADAFAKRGYAYYQKGE---YQKGIDDINEA 358

Query: 261 FEIYPYCAMALNYLANHFFFTGQHFLVEQLTET------ALAVTNHGPTKSHSYYNLARS 314
             + P  A + N LA  F  T     + +  E       A  +TN    + H    LA +
Sbjct: 359 LRLNPKDAESYNNLA-WFRATCPDASMRKGKEAVEAGKKACELTNW--KEWHCIGTLAAA 415

Query: 315 YHSKGDYEKAGLY 327
           Y   GD+E+A  Y
Sbjct: 416 YAETGDFEQAVKY 428


>gi|383319448|ref|YP_005380289.1| TPR repeats containing protein [Methanocella conradii HZ254]
 gi|379320818|gb|AFC99770.1| TPR repeats containing protein [Methanocella conradii HZ254]
          Length = 1006

 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 80/339 (23%), Positives = 147/339 (43%), Gaps = 16/339 (4%)

Query: 138 LLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPG 197
           L  KG +++A   F+  +    +   A          +G   +++  Y  A+++ P  P 
Sbjct: 625 LYDKGMLDEAVKEFREAIRIKPEYAEAHYNLGVALDRKGLIDEAIGEYLIAIEMKPEEPN 684

Query: 198 AIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKM 257
           A    +G+  YK G L  A + F+  + L P++  A   L    L  NE   +   + ++
Sbjct: 685 A-HYSLGMALYKKGLLDDAIKEFKEVIWLKPDDFSARFQLG---LAFNEKNMLDDAIREL 740

Query: 258 QRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHS 317
           + A  + P    A++Y  N     G+  L++       A     P   +++Y L  +Y+ 
Sbjct: 741 REAASMEP-GDPAIHY--NLGLVLGRKGLLDDAIGEFKAALKLKPDDVNAHYYLGLAYNY 797

Query: 318 KGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCE 377
           KG Y+ A      +++   KP +    +Y LG V   +G F  A+  + + L I PD  +
Sbjct: 798 KGMYDDAATELGEALRL--KPDD-ANTHYNLGVVMANMGRFDDAIREYREALRIKPDYAK 854

Query: 378 TLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALD-AFKTAR 436
               LG +    GQ+++A     +A ++ P DA A  +LG   ++ D    LD A +  +
Sbjct: 855 AHNNLGIVLDYKGQVDEAIAEYLEAVRLKPDDANAHYNLG---LAYDNKGMLDEAIRELK 911

Query: 437 TLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
             L+   ++       N+GVI  +KG  + A   +  A+
Sbjct: 912 EALRLKPDDANAHY--NLGVILGKKGLLKEAIDEYNIAV 948



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 90/371 (24%), Positives = 156/371 (42%), Gaps = 20/371 (5%)

Query: 135 GQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS 194
           G  L  KG ++QA   F+       D   A    A V   +G   D++  Y+ A+++ P 
Sbjct: 486 GLALSKKGSLDQAIREFREAYRLKPDFAEAFYNLAVVFGKKGLLDDAIREYREAIRLRPD 545

Query: 195 CPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGM 254
              A    + +   K   +  A + F+ A+ L P++  A   L    L  N+   +   +
Sbjct: 546 YAEA-HYNLAIAYSKKNMVDDAIKEFREAVHLRPDDANAHYNLG---LALNKKGLLDNAI 601

Query: 255 EKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARS 314
            +      + P  A A N LA   +  G   L E + E   A+    P  + ++YNL  +
Sbjct: 602 REYVEVVRLRPDDAKAHNNLALALYDKG--MLDEAVKEFREAIRIK-PEYAEAHYNLGVA 658

Query: 315 YHSKGDYEKA-GLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYP 373
              KG  ++A G Y +A   +  +P+     +Y LG    K G    A+  F++V+ + P
Sbjct: 659 LDRKGLIDEAIGEYLIAIEMKPEEPN----AHYSLGMALYKKGLLDDAIKEFKEVIWLKP 714

Query: 374 DNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFK 433
           D+      LG  + +   ++ A   LR+AA ++P D     +LG  L+    G   DA  
Sbjct: 715 DDFSARFQLGLAFNEKNMLDDAIRELREAASMEPGDPAIHYNLG--LVLGRKGLLDDAIG 772

Query: 434 TARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVI 493
             +  LK   ++V       +G+ +  KG ++ A       LG+ + L   D+ T   + 
Sbjct: 773 EFKAALKLKPDDVNAHYY--LGLAYNYKGMYDDAATE----LGEALRLKPDDANTHYNLG 826

Query: 494 DASASMLQFKD 504
              A+M +F D
Sbjct: 827 VVMANMGRFDD 837



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 72/307 (23%), Positives = 139/307 (45%), Gaps = 18/307 (5%)

Query: 175 RGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEAL 234
           +G+  D+++ YK AL++ P    A R  +G+   + G L    + F+  + L P++ EA 
Sbjct: 424 KGQIDDAIKEYKEALRIRPDYVKA-RNNLGVALDEKGFLDDTIREFREVVWLKPDDAEAH 482

Query: 235 VALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETA 294
             L    L  ++   + + + + + A+ + P  A A   LA    F  +  L + + E  
Sbjct: 483 YNLG---LALSKKGSLDQAIREFREAYRLKPDFAEAFYNLA--VVFGKKGLLDDAIREYR 537

Query: 295 LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLK 354
            A+    P  + ++YNLA +Y  K   + A   +  +V    +P +    +Y LG    K
Sbjct: 538 EAIRLR-PDYAEAHYNLAIAYSKKNMVDDAIKEFREAVHL--RPDD-ANAHYNLGLALNK 593

Query: 355 LGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFI 414
            G   +A+  + +V+ + PD+ +    L       G +++A +  R+A +I P  A+A  
Sbjct: 594 KGLLDNAIREYVEVVRLRPDDAKAHNNLALALYDKGMLDEAVKEFREAIRIKPEYAEAHY 653

Query: 415 DLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDA 474
           +LG   ++ D    +D       +  +   E P     ++G+  ++KG  + A + FK+ 
Sbjct: 654 NLG---VALDRKGLIDEAIGEYLIAIEMKPEEP-NAHYSLGMALYKKGLLDDAIKEFKEV 709

Query: 475 LGDGIWL 481
               IWL
Sbjct: 710 ----IWL 712



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 80/326 (24%), Positives = 124/326 (38%), Gaps = 50/326 (15%)

Query: 127 EPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFN-RGRYSDSLEFY 185
           EP+     G  L  KG ++ A   FK V+    D+  A   Q  + FN +    D++   
Sbjct: 682 EPNAHYSLGMALYKKGLLDDAIKEFKEVIWLKPDDFSARF-QLGLAFNEKNMLDDAIREL 740

Query: 186 KRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV---------- 235
           + A  + P  P AI   +GL   + G L  A   F+ AL+L P++V A            
Sbjct: 741 REAASMEPGDP-AIHYNLGLVLGRKGLLDDAIGEFKAALKLKPDDVNAHYYLGLAYNYKG 799

Query: 236 -----------ALAVMDLQANEAAGIRKGMEKMQR----------AFEIYPYCAMALNYL 274
                      AL +    AN    +   M  M R          A  I P  A A N L
Sbjct: 800 MYDDAATELGEALRLKPDDANTHYNLGVVMANMGRFDDAIREYREALRIKPDYAKAHNNL 859

Query: 275 ANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKE 334
                + GQ   V++     L      P  ++++YNL  +Y +KG  ++A       ++E
Sbjct: 860 GIVLDYKGQ---VDEAIAEYLEAVRLKPDDANAHYNLGLAYDNKGMLDEA-------IRE 909

Query: 335 IN-----KPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQL 389
           +      KP +    +Y LG +  K G  + A+  +   + + PD  E    LG      
Sbjct: 910 LKEALRLKPDD-ANAHYNLGVILGKKGLLKEAIDEYNIAVSLRPDYAEAYYNLGFALDMA 968

Query: 390 GQIEKAQELLRKAAKIDPRDAQAFID 415
               KA E  RK     P    +++D
Sbjct: 969 QMGAKAVEAYRKFIDCAPPQYASYVD 994



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 121/537 (22%), Positives = 210/537 (39%), Gaps = 87/537 (16%)

Query: 302 PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSA 361
           P  S ++YNL  +   KG  + A   Y  S++ +N   ++   +Y LG    K      A
Sbjct: 102 PDFSEAHYNLGVALDDKGLLDDAIKEYRESLR-LNP--DYARAHYSLGIALGKRDQLDEA 158

Query: 362 LTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLI 421
           +  F++ L + PDN E    +G +  + G I+ A +  R A  + P DA+A  +LG   +
Sbjct: 159 IHEFKEALRLQPDNPEVHYNMGVVLARKGLIDDAIKAFRDAIALKPDDAEAHYNLG---V 215

Query: 422 SSDTGAALD-AFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL----- 475
           S D    +D A    R  +    ++   E   N+G+   +KG F+ A + +++A+     
Sbjct: 216 SLDYKGLIDEAISEFRETVWLKPDDA--EAHYNLGLALSKKGMFDQAIREYREAVRLKPD 273

Query: 476 ------GDGIWLT---LLDSKTKTYVI-------DASAS-----MLQFKDM--QLFHRFE 512
                   GI L    ++D   K Y         DA A       L  K+   +  H F+
Sbjct: 274 YAKAHNNLGIVLDYKGMVDEAIKEYRAAVNLKPDDAEAHYNLGVALTSKNELDEAIHEFK 333

Query: 513 NDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKAR 572
                V+L  N     F L   L +      A    R  ++    + +A+  L  +   +
Sbjct: 334 E---AVKLKPNYPEAHFKLGYALCRKGLLDDAIRELREAIWLRPGFAEAHYNLGVVFGKK 390

Query: 573 NNLQLSIELVNEALKVNGKYPNALSMLG---DLELKNDDWVKA-KETFRAASDATDGKDS 628
           N +  +I  + +A+++   Y  A   LG   D + + DD +K  KE  R   D       
Sbjct: 391 NMMDDAIRELKDAIRLRPDYAEAHYNLGLAYDYKGQIDDAIKEYKEALRIRPD------- 443

Query: 629 YATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEK 688
                      +   RN       E   L+     +  V+     +  A    G+ L++K
Sbjct: 444 -----------YVKARNNLGVALDEKGFLDDTIREFREVVWLKPDDAEAHYNLGLALSKK 492

Query: 689 GQFDVSKDLFTQVQEAASGSVFVQMPD---VWINLAHVYFAQGNFALAMKMYQNCLR--- 742
           G  D +     + +EA     +   PD    + NLA V+  +G    A++ Y+  +R   
Sbjct: 493 GSLDQA---IREFREA-----YRLKPDFAEAFYNLAVVFGKKGLLDDAIREYREAIRLRP 544

Query: 743 ---KFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQK 796
              + +YN        LA  + +     D  K    A+HL P +    ++ G+A+ K
Sbjct: 545 DYAEAHYN--------LAIAYSKKNMVDDAIKEFREAVHLRPDDANAHYNLGLALNK 593



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 87/394 (22%), Positives = 159/394 (40%), Gaps = 44/394 (11%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
           A + Y ++ R++          G  L  + ++++A   FK  L    DN         V 
Sbjct: 124 AIKEYRESLRLNPDYARAHYSLGIALGKRDQLDEAIHEFKEALRLQPDNPEVHYNMGVVL 183

Query: 173 FNRGRYSDSLEFYKRALQVHPSCPGA-IRLGIGLCRYKLGQLGKARQAFQRALQLDPENV 231
             +G   D+++ ++ A+ + P    A   LG+ L  YK G + +A   F+  + L P++ 
Sbjct: 184 ARKGLIDDAIKAFRDAIALKPDDAEAHYNLGVSLD-YK-GLIDEAISEFRETVWLKPDDA 241

Query: 232 EALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLT 291
           EA   L    L  ++     + + + + A  + P  A A N L     + G   +V++  
Sbjct: 242 EAHYNLG---LALSKKGMFDQAIREYREAVRLKPDYAKAHNNLGIVLDYKG---MVDEAI 295

Query: 292 ETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK-EINKPHE---------- 340
           +   A  N  P  + ++YNL  +  SK + ++A   +  +VK + N P            
Sbjct: 296 KEYRAAVNLKPDDAEAHYNLGVALTSKNELDEAIHEFKEAVKLKPNYPEAHFKLGYALCR 355

Query: 341 --------------------FIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLK 380
                               F   +Y LG V  K      A+   +  + + PD  E   
Sbjct: 356 KGLLDDAIRELREAIWLRPGFAEAHYNLGVVFGKKNMMDDAIRELKDAIRLRPDYAEAHY 415

Query: 381 ALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLK 440
            LG  Y   GQI+ A +  ++A +I P   +A  +LG  L   + G   D  +  R ++ 
Sbjct: 416 NLGLAYDYKGQIDDAIKEYKEALRIRPDYVKARNNLGVAL--DEKGFLDDTIREFREVVW 473

Query: 441 KAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDA 474
              ++   E   N+G+   +KG  + A + F++A
Sbjct: 474 LKPDDA--EAHYNLGLALSKKGSLDQAIREFREA 505



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 77/307 (25%), Positives = 128/307 (41%), Gaps = 49/307 (15%)

Query: 135 GQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS 194
           G  L  KG ++ A   F+  +  + D   A         ++G   D+++ Y+ +L+++P 
Sbjct: 78  GVALDDKGLLDDAIREFREAVRLNPDFSEAHYNLGVALDDKGLLDDAIKEYRESLRLNPD 137

Query: 195 CPGA-IRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKG 253
              A   LGI L   K  QL +A   F+ AL+L P+N E    + V+          RKG
Sbjct: 138 YARAHYSLGIALG--KRDQLDEAIHEFKEALRLQPDNPEVHYNMGVV--------LARKG 187

Query: 254 M-EKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLA 312
           + +   +AF      A+AL                              P  + ++YNL 
Sbjct: 188 LIDDAIKAFR----DAIALK-----------------------------PDDAEAHYNLG 214

Query: 313 RSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIY 372
            S   KG  ++A   +  +V    KP +    +Y LG    K G F  A+  + + + + 
Sbjct: 215 VSLDYKGLIDEAISEFRETV--WLKPDD-AEAHYNLGLALSKKGMFDQAIREYREAVRLK 271

Query: 373 PDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDA 431
           PD  +    LG +    G +++A +  R A  + P DA+A  +LG  L S ++   A+  
Sbjct: 272 PDYAKAHNNLGIVLDYKGMVDEAIKEYRAAVNLKPDDAEAHYNLGVALTSKNELDEAIHE 331

Query: 432 FKTARTL 438
           FK A  L
Sbjct: 332 FKEAVKL 338


>gi|408790965|ref|ZP_11202576.1| anaphase-promoting complex, cyclosome, subunit 3 [Leptospira meyeri
           serovar Hardjo str. Went 5]
 gi|408464994|gb|EKJ88718.1| anaphase-promoting complex, cyclosome, subunit 3 [Leptospira meyeri
           serovar Hardjo str. Went 5]
          Length = 700

 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 110/472 (23%), Positives = 204/472 (43%), Gaps = 68/472 (14%)

Query: 38  APLDLWLI--IAREYFKQGKV----EQFRQILEEGSSPEIDEYYADVRYERIAILNALGV 91
           AP D+ L   +A  Y KQG +     +F+++++   +             + A+L+    
Sbjct: 245 APTDVTLTYNLAISYLKQGNIAEAISEFQKVVQTAPN------------SQTAVLS---- 288

Query: 92  YYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAF 151
            Y +LG I   QRE  +    A  Y+ +  R+  ++  ++   G + L K   E+A+  F
Sbjct: 289 -YGHLGTI-FYQREDYDR---AEFYFREVIRLKTNDAKSYYNLGLVYLKKKVPEEAAKYF 343

Query: 152 KIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLG 211
           +  L+++ +        A    + G+ + ++   K+AL + PS   ++   +    YK G
Sbjct: 344 QKALDSNANEPEVYRYIADAFLSMGQTNMAITALKKALLLKPSDVDSL-FALSELYYKKG 402

Query: 212 QLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMAL 271
           +L +A   F+R ++L P +  +  A   + +  +E     + +   + A  + P    A 
Sbjct: 403 ELVEAESLFRRIIRLTPGDTYSETAYVNLGIILDEMERYSESITSFEGALALNPKNQSAY 462

Query: 272 NYLANHFFFTGQHFL-VEQLTETALAVTNHGPTK-SHSYYNLARSYHSKG--DYEKAGLY 327
             L   +   G+  + +E L ++     NH  ++ + + Y L   ++S+   +YE+A  +
Sbjct: 463 YNLGLAYLHAGKPTMAIESLRKSQALDPNHTQSRLAIADYYLENRFYSEAIAEYEEAIAW 522

Query: 328 YMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNF---EKVLEIYPDNCETLK--AL 382
                    KP         L + +LKL D      N+   EKVL    +N +  K   L
Sbjct: 523 ---------KPE--------LYEARLKLADVYIQTKNYPAAEKVLVYVLENAKDPKEIKL 565

Query: 383 GHIYVQL--------GQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKT 434
            H  + L        G   KA+E   +A  IDP D ++ + L ++LI  D+G+ +D  K 
Sbjct: 566 AHRKLALSYASSGNSGLSRKAKEEAFRATHIDPEDMESKLVLSKILI--DSGSLVDREKA 623

Query: 435 ARTLLKKAGEEVPIEVL----NNIGVIHFEKGEFESAHQSFKDALGDGIWLT 482
              L      +V   +     N +GV +F+ GEF+ A  SF+ A+     LT
Sbjct: 624 IEELTVITRSDVTPTISSKAHNYLGVCYFKNGEFKKALSSFQTAIDLNPSLT 675



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 61/291 (20%), Positives = 122/291 (41%), Gaps = 16/291 (5%)

Query: 134 KGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHP 193
           +G L    G+   A  A+K        +V      A     +G  ++++  +++ +Q  P
Sbjct: 221 QGNLFQEIGDPASAIEAYKEGQSLAPTDVTLTYNLAISYLKQGNIAEAISEFQKVVQTAP 280

Query: 194 SCPGAI-RLG-IGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQ---ANEAA 248
           +   A+   G +G   Y+     +A   F+  ++L   + ++   L ++ L+     EAA
Sbjct: 281 NSQTAVLSYGHLGTIFYQREDYDRAEFYFREVIRLKTNDAKSYYNLGLVYLKKKVPEEAA 340

Query: 249 G-IRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHS 307
              +K ++      E+Y        Y+A+ F   GQ  +     + AL +    P+   S
Sbjct: 341 KYFQKALDSNANEPEVY-------RYIADAFLSMGQTNMAITALKKALLLK---PSDVDS 390

Query: 308 YYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEK 367
            + L+  Y+ KG+  +A   +   ++           Y  LG +  ++  +  ++T+FE 
Sbjct: 391 LFALSELYYKKGELVEAESLFRRIIRLTPGDTYSETAYVNLGIILDEMERYSESITSFEG 450

Query: 368 VLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGE 418
            L + P N      LG  Y+  G+   A E LRK+  +DP   Q+ + + +
Sbjct: 451 ALALNPKNQSAYYNLGLAYLHAGKPTMAIESLRKSQALDPNHTQSRLAIAD 501


>gi|386829523|ref|ZP_10116630.1| hypothetical protein BegalDRAFT_3419 [Beggiatoa alba B18LD]
 gi|386430407|gb|EIJ44235.1| hypothetical protein BegalDRAFT_3419 [Beggiatoa alba B18LD]
          Length = 1217

 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 72/276 (26%), Positives = 125/276 (45%), Gaps = 41/276 (14%)

Query: 173 FNRGRYSDSLEFYKRAL-----QVHPSCPGAIRLGIGLCR--YKLGQLGKARQAFQRALQ 225
           ++ G Y +S   Y+R+L     Q+ P  P        L    Y +G   +A++ ++RAL+
Sbjct: 411 YDMGDYPNSKALYERSLAIREAQLSPEHPDIALSLNNLALLYYSMGNYDEAKKRYERALE 470

Query: 226 --------LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEI-----YPYCAMALN 272
                   + PE  ++L  LA++     + A  +K  E+     E      +P  A+A N
Sbjct: 471 IREKVYGRMHPEVAQSLNNLALLYYSTGDYAQSKKFYEESLNIVEAVYGKAHPDVALAYN 530

Query: 273 YLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHS-----YYNLARSYHSKGDYEKAGLY 327
            LA  ++  G +   + + E AL++      ++++       NLA  Y+S GDYE+A  +
Sbjct: 531 NLALLYYNIGNYAEAKPMYEKALSIWTKTLGENNTDVALCLNNLALIYYSTGDYEQAEKH 590

Query: 328 YMASV----KEINKPHEFI-FPYYGLGQVQLKLGDFRSALTNFEKVLEI--------YPD 374
           Y  S+    K + K H  +      +G +   LGD+  A   +E+ L I        +PD
Sbjct: 591 YKRSLNIWEKVLGKDHPRVALSLNNIGWLYYSLGDYAKAKPYYERALTIREKALGKEHPD 650

Query: 375 NCETLKALGHIYVQLGQIEKAQELLRKA---AKIDP 407
             ++L  LG +  QLG   +A+ L  +A   A I+P
Sbjct: 651 IAQSLNGLGELNQQLGNFVEAKILFERALPLASIEP 686



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 61/242 (25%), Positives = 102/242 (42%), Gaps = 34/242 (14%)

Query: 267 CAMALNYLANHFFFTGQHFLVEQLTETALAV-----TNHGPTKSHSYYNLARSYHSKGDY 321
            A  LN LA  +   G++   E L   ALA+      +     + S  NLA  Y+   +Y
Sbjct: 147 IATTLNTLAETYRLVGRYTEAEPLHRRALAIRQKLLGDDVLETTTSMNNLALLYYETSEY 206

Query: 322 EKAGLYYMASVKEINK----PHEFI-FPYYGLGQVQLKLGDFRSALTNFEKVLEI----- 371
            KA   Y  ++K   +     H ++      L  +   +G+F+ A+  +E VL I     
Sbjct: 207 NKARPLYEKALKIRRRIWGDEHNYVALSADNLALLYWSMGEFKQAIPLYELVLSIREKNI 266

Query: 372 ---YPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDA----QAFIDLGELLISSD 424
               PD   TL  L  +Y Q G+  +A+ L  +A KI  R+A    QA + L  L   ++
Sbjct: 267 GKDSPDVAVTLNNLAEVYRQTGKYPQARPLYERALKI--REAVYGEQASVTLESLNNLAE 324

Query: 425 TGAALDAFKTARTLLKKA----------GEEVPIEVLNNIGVIHFEKGEFESAHQSFKDA 474
                  ++ A  L KK+          G       LNN+G++++  G F  +   ++++
Sbjct: 325 LYRQTGVYQQAEELHKKSLALREAVYGRGSLETTVALNNLGLLYYNMGRFSDSKPLYEES 384

Query: 475 LG 476
           L 
Sbjct: 385 LA 386



 Score = 40.8 bits (94), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 75/338 (22%), Positives = 131/338 (38%), Gaps = 86/338 (25%)

Query: 164 ALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCR-------YKLGQLGKA 216
           AL     + +N GR+SDS   Y+ +L           L I L         Y +G    +
Sbjct: 360 ALNNLGLLYYNMGRFSDSKPLYEESLATREKLLPPDHLYISLSLNNLALLYYDMGDYPNS 419

Query: 217 RQAFQRAL-----QLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEI-------- 263
           +  ++R+L     QL PE+ +  ++L  + L         +  ++ +RA EI        
Sbjct: 420 KALYERSLAIREAQLSPEHPDIALSLNNLALLYYSMGNYDEAKKRYERALEIREKVYGRM 479

Query: 264 YPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSH-----SYYNLARSYHSK 318
           +P  A +LN LA  ++ TG +   ++  E +L +      K+H     +Y NLA  Y++ 
Sbjct: 480 HPEVAQSLNNLALLYYSTGDYAQSKKFYEESLNIVEAVYGKAHPDVALAYNNLALLYYNI 539

Query: 319 GDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVL-EIYPDNCE 377
           G+Y +A            KP                   +  AL+ + K L E   D   
Sbjct: 540 GNYAEA------------KPM------------------YEKALSIWTKTLGENNTDVAL 569

Query: 378 TLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTART 437
            L  L  IY   G  E+A++  +++           +++ E ++  D           R 
Sbjct: 570 CLNNLALIYYSTGDYEQAEKHYKRS-----------LNIWEKVLGKDH---------PRV 609

Query: 438 LLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
            L           LNNIG +++  G++  A   ++ AL
Sbjct: 610 ALS----------LNNIGWLYYSLGDYAKAKPYYERAL 637


>gi|40063717|gb|AAR38498.1| TPR repeat protein [uncultured marine bacterium 583]
          Length = 733

 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 63/248 (25%), Positives = 114/248 (45%), Gaps = 10/248 (4%)

Query: 173 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 232
           ++ G+  ++L+  +     +P+ P    +  G+C   +G+L +A ++F++AL + P+  E
Sbjct: 20  YSNGQIQEALDAVEALTTDYPNEPLLFNIS-GVCYKAVGELDEAVKSFEKALAIKPDYTE 78

Query: 233 ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTE 292
               L    L   E   +   ++  ++A +I P  A A N L       GQ     Q  E
Sbjct: 79  VNYNLG---LTLQELGRLDAAVKSYEQALDIQPDYAEAHNNLGITLKELGQLDAAVQCYE 135

Query: 293 TALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQ 352
            ALA+    P  + ++ NL  +       + A   Y  ++  IN   ++   +  LG V 
Sbjct: 136 KALAI---NPDYAEAHNNLGNALKDLNQLDAAVKSYEKTLA-INP--DYAEAHNNLGNVL 189

Query: 353 LKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQA 412
             LG   +A+  +EK L I PD  E    LG++   + Q++ A +   KA  I+P  A+A
Sbjct: 190 KDLGQLDAAVKCYEKTLAINPDYAEAHNNLGNVLQDIDQLDAAVKCYEKALAINPDFAEA 249

Query: 413 FIDLGELL 420
           + + G +L
Sbjct: 250 YSNRGNVL 257



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 70/284 (24%), Positives = 125/284 (44%), Gaps = 15/284 (5%)

Query: 138 LLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNR-GRYSDSLEFYKRALQVHPSCP 196
           L + G++++A  A +  L  D  N P L   + V +   G   ++++ +++AL + P   
Sbjct: 19  LYSNGQIQEALDAVE-ALTTDYPNEPLLFNISGVCYKAVGELDEAVKSFEKALAIKPDY- 76

Query: 197 GAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEK 256
             +   +GL   +LG+L  A +++++AL + P+  EA   L +      E   +   ++ 
Sbjct: 77  TEVNYNLGLTLQELGRLDAAVKSYEQALDIQPDYAEAHNNLGIT---LKELGQLDAAVQC 133

Query: 257 MQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYH 316
            ++A  I P  A A N L N      Q     +  E  LA+    P  + ++ NL     
Sbjct: 134 YEKALAINPDYAEAHNNLGNALKDLNQLDAAVKSYEKTLAI---NPDYAEAHNNLGNVLK 190

Query: 317 SKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNC 376
             G  + A   Y  ++  IN   ++   +  LG V   +    +A+  +EK L I PD  
Sbjct: 191 DLGQLDAAVKCYEKTLA-INP--DYAEAHNNLGNVLQDIDQLDAAVKCYEKALAINPDFA 247

Query: 377 ETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 420
           E     G++   L ++++A      A  I P     FI LG+LL
Sbjct: 248 EAYSNRGNVLKDLNRLDEALVSYESAIAIKPD--IDFI-LGDLL 288



 Score = 47.4 bits (111), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 36/132 (27%), Positives = 65/132 (49%), Gaps = 6/132 (4%)

Query: 346 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKI 405
           Y LG    +LG   +A+ ++E+ L+I PD  E    LG    +LGQ++ A +   KA  I
Sbjct: 81  YNLGLTLQELGRLDAAVKSYEQALDIQPDYAEAHNNLGITLKELGQLDAAVQCYEKALAI 140

Query: 406 DPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEF 464
           +P  A+A  +LG  L   +   AA+ +++    +          E  NN+G +  + G+ 
Sbjct: 141 NPDYAEAHNNLGNALKDLNQLDAAVKSYEKTLAINPDYA-----EAHNNLGNVLKDLGQL 195

Query: 465 ESAHQSFKDALG 476
           ++A + ++  L 
Sbjct: 196 DAAVKCYEKTLA 207


>gi|432879797|ref|XP_004073552.1| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit-like
           [Oryzias latipes]
          Length = 1016

 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 77/307 (25%), Positives = 135/307 (43%), Gaps = 14/307 (4%)

Query: 135 GQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS 194
           G LL A G +E+A + +   +E   +   A     CV   +G    ++  +++A+ + P+
Sbjct: 132 GNLLKALGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPN 191

Query: 195 CPGA-IRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKG 253
              A I LG  L   ++    +A   + RAL L P +      LA +     E   I   
Sbjct: 192 FLDAYINLGNVLKEARI--FDRAVAGYLRALSLSPNHAVVHGNLACVYY---EQGLIDLA 246

Query: 254 MEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLAR 313
           ++  +RA E+ P+   A   LAN     G     E+   TAL +    PT + S  NLA 
Sbjct: 247 IDTYRRAIELQPHFPDAYCNLANALKEKGNVSEAEECYNTALRLC---PTHADSLNNLAN 303

Query: 314 SYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYP 373
               +G+ E+A   Y  +++      EF   +  L  V  + G  + AL ++++ + I P
Sbjct: 304 IKREQGNIEEAVQLYRKALEVFP---EFAAAHSNLASVLQQQGKLQEALMHYKEAIRISP 360

Query: 374 DNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFK 433
              +    +G+   ++  ++ A +   +A +I+P  A A  +L    I  D+G   +A  
Sbjct: 361 TFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLAS--IHKDSGNIPEAIA 418

Query: 434 TARTLLK 440
           + RT LK
Sbjct: 419 SYRTALK 425



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 69/332 (20%), Positives = 135/332 (40%), Gaps = 48/332 (14%)

Query: 89  LGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQAS 148
             V ++ LG +   Q E      LA  ++ KA  +D +    ++  G +L      ++A 
Sbjct: 158 FAVAWSNLGCVFNAQGE----IWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAV 213

Query: 149 SAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRY 208
           + +   L    ++       ACV + +G    +++ Y+RA+++ P  P A    +     
Sbjct: 214 AGYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAY-CNLANALK 272

Query: 209 KLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCA 268
           + G + +A + +  AL+L P + ++L  LA +     E   I + ++  ++A E++P  A
Sbjct: 273 EKGNVSEAEECYNTALRLCPTHADSLNNLANIK---REQGNIEEAVQLYRKALEVFPEFA 329

Query: 269 MALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYY 328
            A                                   HS  NLA     +G  ++A ++Y
Sbjct: 330 AA-----------------------------------HS--NLASVLQQQGKLQEALMHY 352

Query: 329 MASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQ 388
             +++ I+    F   Y  +G    ++ D + AL  + + ++I P   +    L  I+  
Sbjct: 353 KEAIR-ISP--TFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKD 409

Query: 389 LGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 420
            G I +A    R A K+ P    A+ +L   L
Sbjct: 410 SGNIPEAIASYRTALKLKPDFPDAYCNLAHCL 441



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 68/306 (22%), Positives = 129/306 (42%), Gaps = 26/306 (8%)

Query: 176 GRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV 235
           GR  ++   Y +A++  P+   A    +G      G++  A   F++A+ LDP  ++A +
Sbjct: 139 GRLEEAKACYLKAIETQPNFAVAWS-NLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYI 197

Query: 236 ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETAL 295
            L  +     EA    + +    RA  + P  A+    LA  ++  G   L       A+
Sbjct: 198 NLGNV---LKEARIFDRAVAGYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAI 254

Query: 296 AVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYG-----LGQ 350
            +  H P    +Y NLA +   KG+  +A   Y  +++        + P +      L  
Sbjct: 255 ELQPHFPD---AYCNLANALKEKGNVSEAEECYNTALR--------LCPTHADSLNNLAN 303

Query: 351 VQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDA 410
           ++ + G+   A+  + K LE++P+       L  +  Q G++++A    ++A +I P  A
Sbjct: 304 IKREQGNIEEAVQLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFA 363

Query: 411 QAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQ 469
            A+ ++G  L    D   AL  +  A  +          +  +N+  IH + G    A  
Sbjct: 364 DAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA-----DAHSNLASIHKDSGNIPEAIA 418

Query: 470 SFKDAL 475
           S++ AL
Sbjct: 419 SYRTAL 424



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 99/494 (20%), Positives = 183/494 (37%), Gaps = 82/494 (16%)

Query: 142 GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 201
           G+ E A      +   + DN   LL  + + F   R   S  F   A++ +P    A   
Sbjct: 25  GDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPMLAEAYS- 83

Query: 202 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 261
            +G    + GQL +A + ++ AL+L P+ +         DL                   
Sbjct: 84  NLGNVYKERGQLQEAIEHYRHALRLKPDFIXXXXXXXXXDL------------------- 124

Query: 262 EIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDY 321
               YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G+ 
Sbjct: 125 ----YCVRS--DLGNLLKALGR---LEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEI 175

Query: 322 EKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKA 381
             A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++      
Sbjct: 176 WLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVAGYLRALSLSPNHAVVHGN 232

Query: 382 LGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLI-SSDTGAALDAFKTARTLLK 440
           L  +Y + G I+ A +  R+A ++ P    A+ +L   L    +   A + + TA  L  
Sbjct: 233 LACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGNVSEAEECYNTALRLCP 292

Query: 441 KAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASML 500
              +      LNN+  I  E+G  E A Q ++ AL                         
Sbjct: 293 THADS-----LNNLANIKREQGNIEEAVQLYRKAL------------------------- 322

Query: 501 QFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVD 560
                ++F  F                  NLA +L+Q      A + Y+  +     + D
Sbjct: 323 -----EVFPEF-------------AAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFAD 364

Query: 561 AYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAAS 620
           AY  +    K   ++Q +++    A+++N  + +A S L  +   + +  +A  ++R A 
Sbjct: 365 AYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTAL 424

Query: 621 D-ATDGKDSYATLS 633
               D  D+Y  L+
Sbjct: 425 KLKPDFPDAYCNLA 438


>gi|386813992|ref|ZP_10101216.1| conserved hypothetical protein [planctomycete KSU-1]
 gi|386403489|dbj|GAB64097.1| conserved hypothetical protein [planctomycete KSU-1]
          Length = 332

 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 67/262 (25%), Positives = 111/262 (42%), Gaps = 56/262 (21%)

Query: 141 KGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIR 200
           KG  + A  AF+ V+E   DNV A        F+ GR+  ++E +K+ +Q+ P    A  
Sbjct: 102 KGMFDNAIEAFQKVIEQKPDNVDAYYNLGSAYFDTGRFDKAIESFKKTVQIKPDHRSAYS 161

Query: 201 LGIGLCRYKLGQLGKARQAFQRALQLDPE------NVEALVALAVMDLQANEAAGIRKGM 254
           L +G+   K+G+   A Q  ++ ++LDP       N+  + ++  MD +A         M
Sbjct: 162 L-LGIAYSKIGKYDDAIQILKKRIELDPNLAIAHSNLGIVYSMKGMDKEA---------M 211

Query: 255 EKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARS 314
           E+  +A EI P           H              E+AL             YN A  
Sbjct: 212 EEYTKALEIDP----------GH--------------ESAL-------------YNTALL 234

Query: 315 YHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPD 374
           Y   GD ++A  YY+ +  E N  +      Y LG+  +K   +  A+  F+  +   PD
Sbjct: 235 YDKTGDTDRAIQYYIKAT-EANVSN--ADAQYRLGKNYIKKKQYDDAINAFQIAVMTNPD 291

Query: 375 NCETLKALGHIYVQLGQIEKAQ 396
           N E  + +G+ Y   G  ++A+
Sbjct: 292 NAEIYQDIGNAYKAKGMKKEAE 313



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 66/135 (48%), Gaps = 3/135 (2%)

Query: 283 QHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFI 342
           Q+ L ++  E         P  + +Y N+  +Y  KG ++ A     A  K I +  + +
Sbjct: 67  QYGLFDEAIEMFKKSLAKNPNNTDAYNNIGLAYAQKGMFDNA---IEAFQKVIEQKPDNV 123

Query: 343 FPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKA 402
             YY LG      G F  A+ +F+K ++I PD+      LG  Y ++G+ + A ++L+K 
Sbjct: 124 DAYYNLGSAYFDTGRFDKAIESFKKTVQIKPDHRSAYSLLGIAYSKIGKYDDAIQILKKR 183

Query: 403 AKIDPRDAQAFIDLG 417
            ++DP  A A  +LG
Sbjct: 184 IELDPNLAIAHSNLG 198



 Score = 56.2 bits (134), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 57/242 (23%), Positives = 107/242 (44%), Gaps = 10/242 (4%)

Query: 176 GRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV 235
           G + +++E +K++L  +P+   A    IGL   + G    A +AFQ+ ++  P+NV+A  
Sbjct: 69  GLFDEAIEMFKKSLAKNPNNTDAYN-NIGLAYAQKGMFDNAIEAFQKVIEQKPDNVDAYY 127

Query: 236 ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETAL 295
            L        +     K +E  ++  +I P    A + L   +   G++    Q+ +  +
Sbjct: 128 NLGSAYF---DTGRFDKAIESFKKTVQIKPDHRSAYSLLGIAYSKIGKYDDAIQILKKRI 184

Query: 296 AVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKL 355
            +    P  + ++ NL   Y  KG  ++A   Y  ++ EI+  HE     Y    +  K 
Sbjct: 185 ELD---PNLAIAHSNLGIVYSMKGMDKEAMEEYTKAL-EIDPGHESAL--YNTALLYDKT 238

Query: 356 GDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFID 415
           GD   A+  + K  E    N +    LG  Y++  Q + A    + A   +P +A+ + D
Sbjct: 239 GDTDRAIQYYIKATEANVSNADAQYRLGKNYIKKKQYDDAINAFQIAVMTNPDNAEIYQD 298

Query: 416 LG 417
           +G
Sbjct: 299 IG 300



 Score = 43.1 bits (100), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 63/126 (50%), Gaps = 7/126 (5%)

Query: 657 LEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDV 716
            ++A E++ + + ++ +N  A N  G+  A+KG FD + + F +V E    +V     D 
Sbjct: 71  FDEAIEMFKKSLAKNPNNTDAYNNIGLAYAQKGMFDNAIEAFQKVIEQKPDNV-----DA 125

Query: 717 WINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRA 776
           + NL   YF  G F  A++ ++  ++    +  A  LL +A +  +  ++ D  + L + 
Sbjct: 126 YYNLGSAYFDTGRFDKAIESFKKTVQIKPDHRSAYSLLGIAYS--KIGKYDDAIQILKKR 183

Query: 777 IHLAPS 782
           I L P+
Sbjct: 184 IELDPN 189



 Score = 42.4 bits (98), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 39/141 (27%), Positives = 64/141 (45%), Gaps = 14/141 (9%)

Query: 335 INKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK 394
           I+ PHE     Y  G    + G F  A+  F+K L   P+N +    +G  Y Q G  + 
Sbjct: 52  IDMPHE----QYKQGLHYAQYGLFDEAIEMFKKSLAKNPNNTDAYNNIGLAYAQKGMFDN 107

Query: 395 AQELLRKAAKIDPRDAQAFIDLGELLISSDTG---AALDAFKTARTLLKKAGEEVPIEVL 451
           A E  +K  +  P +  A+ +LG      DTG    A+++FK  +T+  K        +L
Sbjct: 108 AIEAFQKVIEQKPDNVDAYYNLGSAYF--DTGRFDKAIESFK--KTVQIKPDHRSAYSLL 163

Query: 452 NNIGVIHFEKGEFESAHQSFK 472
              G+ + + G+++ A Q  K
Sbjct: 164 ---GIAYSKIGKYDDAIQILK 181


>gi|21228822|ref|NP_634744.1| hypothetical protein MM_2720 [Methanosarcina mazei Go1]
 gi|20907343|gb|AAM32416.1| hypothetical protein MM_2720 [Methanosarcina mazei Go1]
          Length = 1129

 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 97/386 (25%), Positives = 151/386 (39%), Gaps = 60/386 (15%)

Query: 95  YLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIV 154
           + GK  T    K E +  A   Y+ A  I+      W  KG  L   G  E+A   ++  
Sbjct: 645 WYGKAST--YSKLEMYEDALHSYDMALAINPVRTEAWYEKGSALDKLGRSEEALECYQKA 702

Query: 155 LEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLG 214
           L+ D  +  A  G A    + GR  +++ +Y + L+++ +   A++ G  L    LG+  
Sbjct: 703 LDIDPQSSNAWYGMASTSSDLGRAEEAIAYYDQLLKLNSTDSEALQ-GKSLALASLGRYD 761

Query: 215 KARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYL 274
           +A   F   L+L+PENVEAL   A         A  R G  + + A E Y          
Sbjct: 762 EAVACFNPLLELEPENVEALEGRAF--------ALARSG--RPEAALEDYD--------- 802

Query: 275 ANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKE 334
                                 +    PT S +    A      G Y++A   Y   + E
Sbjct: 803 ---------------------VIMKLDPTNSKALSEKASLLEELGRYDEAASTY-GEILE 840

Query: 335 INKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK 394
           I   +  I   Y  G+    +GDF +A+  ++K+L + P N + +   G     L ++EK
Sbjct: 841 ITPENREIM--YRQGKALEAMGDFEAAIACYDKILALDPKNIDAINNKG---FALSKMEK 895

Query: 395 AQELL---RKAAKIDPRDAQA--FIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIE 449
            QE L    KA + DP +  A  F       ISS+  AAL+ F     L         I 
Sbjct: 896 YQEALATYDKALEYDPDNPAAWYFKGCANFAISSNN-AALECFNKTVQLKPDC-----IT 949

Query: 450 VLNNIGVIHFEKGEFESAHQSFKDAL 475
              N G +    G+   +  S++ AL
Sbjct: 950 AWYNKGYLANVLGDVNESINSYESAL 975



 Score = 63.2 bits (152), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 78/328 (23%), Positives = 126/328 (38%), Gaps = 43/328 (13%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
           A   Y+KA ++D      W  KG      G+ + A  ++   ++ D +   A  G+A   
Sbjct: 454 AVGCYDKALKLDSGYAKVWYKKGYDSSKLGKYKDAVKSYDEAIDLDENYTLAWYGKAFAL 513

Query: 173 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 232
              GRY DS+  Y R L+V P     I    GL   +LG+  +A   + +ALQ+   N  
Sbjct: 514 AKIGRYEDSIVCYDRVLEVAPDS-AEIWYNKGLLLDELGRYQEASDCYSQALQI---NSN 569

Query: 233 ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTE 292
             VA   ++      +G    +    +   I P  A+   + +                 
Sbjct: 570 YSVARFRLNKDIEMLSGNLTSISANNKNTNINPQKAITGGFWS----------------- 612

Query: 293 TALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQ 352
                           Y L+  Y S  D  +       S+K+++    +   +YG     
Sbjct: 613 ----------------YLLSYKYASPDDNTEIS----GSIKDLSPEFGYDEAWYGKASTY 652

Query: 353 LKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQA 412
            KL  +  AL +++  L I P   E     G    +LG+ E+A E  +KA  IDP+ + A
Sbjct: 653 SKLEMYEDALHSYDMALAINPVRTEAWYEKGSALDKLGRSEEALECYQKALDIDPQSSNA 712

Query: 413 FIDLGELLISSDTGAALDAFKTARTLLK 440
           +  +     SSD G A +A      LLK
Sbjct: 713 WYGMAS--TSSDLGRAEEAIAYYDQLLK 738



 Score = 41.2 bits (95), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 77/327 (23%), Positives = 116/327 (35%), Gaps = 47/327 (14%)

Query: 108 EHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLG 167
           E++  A   +N+A  +   +   W  KG +    G+ E A   +   +  + D V A   
Sbjct: 212 ENYEEAMNCFNRALNVTPEDFELWNQKGIMYDLSGDYESAIECYDQAISLNPDLVEAWYN 271

Query: 168 QACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLD 227
           +         Y D+L  Y+  L   P    A++   GLC  +LG+  +A Q +   L   
Sbjct: 272 KGMDLERMEMYQDALTCYEFVLLSEPENLSALQ-KKGLCLERLGRNEEALQCYDEILVYS 330

Query: 228 PENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLV 287
           P+N EA  +             +   M +   A   Y     ALN  A          L+
Sbjct: 331 PDNTEAWYS----------KGSVLNAMGQYDAAIICYD---RALNPDAGIEIQEAGDSLL 377

Query: 288 EQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYG 347
           E L                      + Y S        L   + V E   P   I  +Y 
Sbjct: 378 ESL----------------------KVYDSS-------LPVYSEVPEFKSPAVKI--WYD 406

Query: 348 LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 407
            G     LG++ SAL  + KVLE  PD+       G    +L +  +A     KA K+D 
Sbjct: 407 KGMAFDNLGNYESALECYNKVLETEPDHAIIWYQKGLNLDRLNKSAEAVGCYDKALKLDS 466

Query: 408 RDAQAFIDLGELLISSDTGAALDAFKT 434
             A+ +   G    SS  G   DA K+
Sbjct: 467 GYAKVWYKKG--YDSSKLGKYKDAVKS 491


>gi|118378373|ref|XP_001022362.1| TPR Domain containing protein [Tetrahymena thermophila]
 gi|89304129|gb|EAS02117.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
          Length = 390

 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 65/288 (22%), Positives = 133/288 (46%), Gaps = 14/288 (4%)

Query: 132 VGKGQLLLAKGEVEQASSAFKIV--LEADRDNVPALLGQACVEFNRGRYSDSLEFYKRAL 189
           +  G      G ++QA  ++K+   LEAD ++V   LG   V   +G+  +S+++YK+ L
Sbjct: 17  MADGMKFHMNGMLDQAIESYKLYAQLEADDNDVYYNLGL--VYQQKGQLDESIKWYKKCL 74

Query: 190 QVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAG 249
            ++P+    ++  IG   ++     +  +   R +Q++P+N+     L  + ++ N    
Sbjct: 75  NLNPNDESCLQ-KIGAVYFQKNMFDECIEKNLRCIQINPKNINYYNNLGFIFIEKNMN-- 131

Query: 250 IRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYY 309
             + +   +++ EI P     +NY  N      +  L+E+  +      N  P  S  YY
Sbjct: 132 -DEALNYFKKSLEINPN-QDQINY--NIGVIYDRKGLLEEAIKHYQNCINLNPEYSKCYY 187

Query: 310 NLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVL 369
           NL   + +K  +++A   Y   +  +N  HE    YY LG   L+      A++ F+K L
Sbjct: 188 NLGVCFRNKNMFDEAIQNYQKCII-LNPQHESC--YYNLGNALLEKNMLDEAISAFQKCL 244

Query: 370 EIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 417
            I P      + +G+ +++     +A +  +K+ +++P+    +  LG
Sbjct: 245 NINPKKDSCYENMGNAFLRKEMYNEAIKSYQKSIELNPQFDSCYRSLG 292



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 66/330 (20%), Positives = 137/330 (41%), Gaps = 23/330 (6%)

Query: 91  VYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSA 150
           VYY  LG +  ++ + +E    + ++Y K   ++ ++ S     G +   K   ++    
Sbjct: 49  VYYN-LGLVYQQKGQLDE----SIKWYKKCLNLNPNDESCLQKIGAVYFQKNMFDECIEK 103

Query: 151 FKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 210
               ++ +  N+        +   +    ++L ++K++L+++P+    I   IG+   + 
Sbjct: 104 NLRCIQINPKNINYYNNLGFIFIEKNMNDEALNYFKKSLEINPN-QDQINYNIGVIYDRK 162

Query: 211 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 270
           G L +A + +Q  + L+PE  +    L V            +       A + Y  C + 
Sbjct: 163 GLLEEAIKHYQNCINLNPEYSKCYYNLGV----------CFRNKNMFDEAIQNYQKCIIL 212

Query: 271 LNYLANHFFFTGQHFLVEQLTETALA----VTNHGPTKSHSYYNLARSYHSKGDYEKAGL 326
                + ++  G   L + + + A++      N  P K   Y N+  ++  K  Y +A  
Sbjct: 213 NPQHESCYYNLGNALLEKNMLDEAISAFQKCLNINPKKDSCYENMGNAFLRKEMYNEAIK 272

Query: 327 YYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIY 386
            Y  S+ E+N   +F   Y  LG     +  F   +  F+K LE+ P N      L   Y
Sbjct: 273 SYQKSI-ELNP--QFDSCYRSLGYAFCCIEKFDQGIEQFKKCLELNPKNEHCNHNLAKAY 329

Query: 387 VQLGQIEKAQELLRKAAKIDPRDAQAFIDL 416
           +  G I++A    ++  +I+P+D +   +L
Sbjct: 330 LLNGMIDEAIISYQRQLEINPKDQECLQEL 359



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 33/133 (24%), Positives = 68/133 (51%), Gaps = 6/133 (4%)

Query: 345 YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAK 404
           YY LG V  + G    ++  ++K L + P++   L+ +G +Y Q    ++  E   +  +
Sbjct: 50  YYNLGLVYQQKGQLDESIKWYKKCLNLNPNDESCLQKIGAVYFQKNMFDECIEKNLRCIQ 109

Query: 405 IDPRDAQAFIDLGELLISSDTG-AALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGE 463
           I+P++   + +LG + I  +    AL+ FK  ++L     ++   ++  NIGVI+  KG 
Sbjct: 110 INPKNINYYNNLGFIFIEKNMNDEALNYFK--KSLEINPNQD---QINYNIGVIYDRKGL 164

Query: 464 FESAHQSFKDALG 476
            E A + +++ + 
Sbjct: 165 LEEAIKHYQNCIN 177


>gi|66793439|ref|NP_001019747.1| O-linked N-acetylglucosamine (GlcNAc) transferase [Xenopus
           (Silurana) tropicalis]
 gi|60618530|gb|AAH90599.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
           [Xenopus (Silurana) tropicalis]
          Length = 1035

 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 103/478 (21%), Positives = 191/478 (39%), Gaps = 27/478 (5%)

Query: 142 GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 201
           G+ E A      +   + DN   LL  + + F   R   S  F   A++ +P    A   
Sbjct: 25  GDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYS- 83

Query: 202 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 261
            +G    + GQL +A + ++ AL+L P+ ++  + LA   + A +  G    ++    A 
Sbjct: 84  NLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEG---AVQAYVSAL 140

Query: 262 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 319
           +  P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G
Sbjct: 141 QYNPDLYCVRS--DLGNLLKALGR---LEEAKACYLKAIETQPNFAVAWSNLGCVFNAQG 195

Query: 320 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 379
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++    
Sbjct: 196 EIWLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVH 252

Query: 380 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLL 439
             L  +Y + G I+ A +  R+A ++ P    A+ +L   L   + G+ +DA +   T L
Sbjct: 253 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANAL--KEKGSVVDAEECYNTAL 310

Query: 440 KKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASM 499
           +        + LNN+  I  E+G  E A + ++ AL       +       +   AS   
Sbjct: 311 RLCPTHA--DSLNNLANIKREQGNIEEAVRLYRKAL------EVFPEFAAAHSNLASVLQ 362

Query: 500 LQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYV 559
            Q K  +    ++     + +         N+   L+++ D   A   Y   +     + 
Sbjct: 363 QQGKLQEALMHYKEA---IRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA 419

Query: 560 DAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFR 617
           DA+  LA+I K   N+  +I     ALK+   +P+A   L        DW    E  +
Sbjct: 420 DAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMK 477



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 86/386 (22%), Positives = 163/386 (42%), Gaps = 24/386 (6%)

Query: 93  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 152
           Y+ LG +  ++ + +E    A ++Y  A R+       ++     L+A G++E A  A+ 
Sbjct: 82  YSNLGNVYKERGQLQE----AIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 137

Query: 153 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 210
             L+ + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 138 SALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIETQPNFAVAWS-NLGCVFNAQ 194

Query: 211 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 270
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 195 GEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAAYLRALSLSPNHAVV 251

Query: 271 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 330
              LA  ++  G   L       A+ +  H P    +Y NLA +   KG    A   Y  
Sbjct: 252 HGNLACVYYEQGLIDLAIDTYRRAIELQPHFPD---AYCNLANALKEKGSVVDAEECYNT 308

Query: 331 SVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLG 390
           +++      + +     L  ++ + G+   A+  + K LE++P+       L  +  Q G
Sbjct: 309 ALRLCPTHADSL---NNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQG 365

Query: 391 QIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGEEVPIE 449
           ++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +          +
Sbjct: 366 KLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA-----D 420

Query: 450 VLNNIGVIHFEKGEFESAHQSFKDAL 475
             +N+  IH + G    A  S++ AL
Sbjct: 421 AHSNLASIHKDSGNIPEAIASYRTAL 446



 Score = 42.7 bits (99), Expect = 0.89,   Method: Compositional matrix adjust.
 Identities = 77/347 (22%), Positives = 141/347 (40%), Gaps = 57/347 (16%)

Query: 278 FFFTGQHFLVEQLTETA----LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK 333
              +  HF   +L  +A    LA+  + P  + +Y NL   Y  +G  ++A  +Y  +++
Sbjct: 49  LLLSSIHFQCRRLDRSAHFSTLAIKQN-PLLAEAYSNLGNVYKERGQLQEAIEHYRHALR 107

Query: 334 EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIE 393
              KP +FI  Y  L    +  GD   A+  +   L+  PD       LG++   LG++E
Sbjct: 108 L--KP-DFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLE 164

Query: 394 KAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNN 453
           +A+    KA +  P  A A+ +LG                    +    GE         
Sbjct: 165 EAKACYLKAIETQPNFAVAWSNLG-------------------CVFNAQGEIW------- 198

Query: 454 IGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVID-ASASMLQFKDMQLFHRFE 512
           + + HFEK    +   +F DA     ++ L +   +  + D A A+ L+   +       
Sbjct: 199 LAIHHFEKAV--TLDPNFLDA-----YINLGNVLKEARIFDRAVAAYLRALSLS------ 245

Query: 513 NDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKAR 572
              NH  +  N   V +    L++   DT      YR  +     + DAY  LA   K +
Sbjct: 246 --PNHAVVHGNLACVYYEQG-LIDLAIDT------YRRAIELQPHFPDAYCNLANALKEK 296

Query: 573 NNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAA 619
            ++  + E  N AL++   + ++L+ L +++ +  +  +A   +R A
Sbjct: 297 GSVVDAEECYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKA 343


>gi|443477489|ref|ZP_21067333.1| Tetratricopeptide TPR_2 repeat-containing protein [Pseudanabaena
           biceps PCC 7429]
 gi|443017386|gb|ELS31839.1| Tetratricopeptide TPR_2 repeat-containing protein [Pseudanabaena
           biceps PCC 7429]
          Length = 528

 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 71/299 (23%), Positives = 131/299 (43%), Gaps = 25/299 (8%)

Query: 131 WVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQ 190
           + G G  L  KG+++ A +A +  +  D+   PA  G     + +G  S +++ Y++ +Q
Sbjct: 100 YYGLGVALRQKGDIQGAINAHRQAITIDKSYTPAYYGLGIALYQKGDSSGAIDAYQQFIQ 159

Query: 191 VHPS----CPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA-VMDLQAN 245
           +  +     P    LG+   R     + +A  +F++A++ DP+   A   L  V+  Q N
Sbjct: 160 LSKADTNLAPAYYNLGLAYERRN--NIDEAVASFRKAIEFDPKYALAHNGLGTVLRRQGN 217

Query: 246 EAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFF----FTGQHFLVEQLTETALAVTNHG 301
                ++ +   ++A E+ P  A+A   L    +    +TG         E    VT   
Sbjct: 218 R----KEAIAAYRKAIELAPQYAVAHFALGISLYEDRDYTGA-------IEAYKRVTTLE 266

Query: 302 PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSA 361
           P   + YYNL  +Y+   D   A   +  ++++  +  +    Y  LG V L+  +   A
Sbjct: 267 PNFPNVYYNLGLAYNQLSDRPNAIATFRKAIEQDPRNADI---YAILGSVFLRDENIPEA 323

Query: 362 LTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 420
              F++  EI P    +   LG    + G +E A    +K+  I+P  A A+ +LG +L
Sbjct: 324 AEAFKRSTEINPKVASSFNGLGLALRRQGDLEGAIAAYQKSITINPNYAVAYNNLGRVL 382



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 69/300 (23%), Positives = 131/300 (43%), Gaps = 10/300 (3%)

Query: 141 KGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIR 200
           + ++++A + ++  + A  + VPA  G       +G    ++  +++A+ +  S   A  
Sbjct: 76  QNQLDRALTLYRQAIAASPELVPAYYGLGVALRQKGDIQGAINAHRQAITIDKSYTPAY- 134

Query: 201 LGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRA 260
            G+G+  Y+ G    A  A+Q+ +QL   +     A   + L       I + +   ++A
Sbjct: 135 YGLGIALYQKGDSSGAIDAYQQFIQLSKADTNLAPAYYNLGLAYERRNNIDEAVASFRKA 194

Query: 261 FEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGD 320
            E  P  A+A N L       G           A+ +    P  + +++ L  S +   D
Sbjct: 195 IEFDPKYALAHNGLGTVLRRQGNRKEAIAAYRKAIELA---PQYAVAHFALGISLYEDRD 251

Query: 321 YEKA-GLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 379
           Y  A   Y   +  E N P+     YY LG    +L D  +A+  F K +E  P N +  
Sbjct: 252 YTGAIEAYKRVTTLEPNFPNV----YYNLGLAYNQLSDRPNAIATFRKAIEQDPRNADIY 307

Query: 380 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG-ELLISSDTGAALDAFKTARTL 438
             LG ++++   I +A E  +++ +I+P+ A +F  LG  L    D   A+ A++ + T+
Sbjct: 308 AILGSVFLRDENIPEAAEAFKRSTEINPKVASSFNGLGLALRRQGDLEGAIAAYQKSITI 367


>gi|254412148|ref|ZP_05025923.1| Tetratricopeptide repeat family [Coleofasciculus chthonoplastes PCC
           7420]
 gi|196181114|gb|EDX76103.1| Tetratricopeptide repeat family [Coleofasciculus chthonoplastes PCC
           7420]
          Length = 427

 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 77/295 (26%), Positives = 135/295 (45%), Gaps = 18/295 (6%)

Query: 127 EPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPA---LLGQACVEFNRGRYSDSLE 183
           E +T+  +G +   + + + A  AF+  L+ D   +P    LLG A   F +G+ + + E
Sbjct: 50  EAATFFQQGVMRYNRSDFKAAELAFRKALQED-PFIPMARYLLGNAL--FQQGQIAAAAE 106

Query: 184 FYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQ 243
            Y+ A+ + P+   A    +GL  Y+ G + +A  A+Q+A+ +DP    A   L +    
Sbjct: 107 QYQMAIGLDPNMAEA-HYNLGLMLYQQGNIEEAISAYQQAIAIDPNLAAARYNLGL---- 161

Query: 244 ANEAAG-IRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGP 302
           A EA G     + +  +A  + P  A+A   LA       Q+ +   +     A+ N   
Sbjct: 162 ALEAVGDTEAALSEYTQAVRLNPNSAVAKYNLA--LLLAKQNQVDSAIAALRQALRNDS- 218

Query: 303 TKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSAL 362
               ++Y L      +    +A   ++ +  +IN    F   +Y LG + L+ GD   A+
Sbjct: 219 QFVQAHYQLGLLLAQQNQITEAKNSFLRAT-QINS--RFAPAHYRLGLIFLQQGDAEEAI 275

Query: 363 TNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 417
             F  V +I PDN +  + LG   +Q G+ E+A   L +A  +DP D+ A  +L 
Sbjct: 276 RRFNWVTQIDPDNVDAYRQLGAALIQNGEYEQAIAALERAISLDPYDSLAHYNLA 330


>gi|430747186|ref|YP_007206315.1| O-linked N-acetylglucosamine transferase, SPINDLY family
           [Singulisphaera acidiphila DSM 18658]
 gi|430018906|gb|AGA30620.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
           [Singulisphaera acidiphila DSM 18658]
          Length = 827

 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 96/416 (23%), Positives = 171/416 (41%), Gaps = 36/416 (8%)

Query: 211 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 270
           G++ +A QA+++ L  DP  + A   L V     +    +   +   Q+   + P  A A
Sbjct: 18  GRIAQAEQAYRQVLSADPSYIPAWYLLGVA---CHGLGNLTGALGAFQQTLRLQPDHAEA 74

Query: 271 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 330
            N+L   +   G    +E+     L      P    +Y NLA ++  +G  ++A      
Sbjct: 75  QNHLGIVWAQAGS---LEEAVRCFLLTLQLQPNSLDAYKNLAVTFERQGRLDEA---VAC 128

Query: 331 SVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLG 390
             K +    +    +  LG +  K G +  A+   E+VL I P+  ETL  LG +    G
Sbjct: 129 DRKVVELKPDLAEAHRHLGVLLRKQGKWGEAIVALEQVLRIKPELPETLNDLGLLLEMTG 188

Query: 391 QIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKK----AGEEV 446
           Q+E+A    + A ++ P  A A+ ++  +L     G   +A  + R  ++     AG   
Sbjct: 189 QLEEAVVRFQAAIRLRPEFAGAYSNMSVVL--KQLGRLDEAITSGREAVRLDPGFAGAH- 245

Query: 447 PIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSK--TKTYVIDASASML-QFK 503
                NN+GVI  ++G ++ A   F +AL        LD +     Y + +  S L +F+
Sbjct: 246 -----NNLGVILEKEGGWDEATTCFHEAL-------RLDPRFVEAYYNLGSVLSRLGRFE 293

Query: 504 DMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYL 563
           D +   R       + L  +      NLA  L +      A   YR  +    ++VD Y+
Sbjct: 294 DAESICR-----QAITLDPDSAEAHHNLAFALSERGQLTEAETNYRRAIQLKPEFVDPYV 348

Query: 564 RLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAA 619
            L ++      L  +     EA++++     AL  LG + ++     +A   +R A
Sbjct: 349 NLTSVLGKFGKLDEAEACSREAVRLDPNRSEALVNLGFVLIEKGHIAEALAAYREA 404



 Score = 66.2 bits (160), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 72/339 (21%), Positives = 151/339 (44%), Gaps = 26/339 (7%)

Query: 142 GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 201
           G +E+A   F + L+   +++ A    A     +GR  +++   ++ +++ P    A R 
Sbjct: 86  GSLEEAVRCFLLTLQLQPNSLDAYKNLAVTFERQGRLDEAVACDRKVVELKPDLAEAHR- 144

Query: 202 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 261
            +G+   K G+ G+A  A ++ L++ PE  E L  L ++     +   + + + + Q A 
Sbjct: 145 HLGVLLRKQGKWGEAIVALEQVLRIKPELPETLNDLGLLLEMTGQ---LEEAVVRFQAAI 201

Query: 262 EIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH------GPTKSHSYYNLARSY 315
            + P  A A         ++    +++QL     A+T+        P  + ++ NL    
Sbjct: 202 RLRPEFAGA---------YSNMSVVLKQLGRLDEAITSGREAVRLDPGFAGAHNNLGVIL 252

Query: 316 HSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDN 375
             +G +++A   +  +++   +   F+  YY LG V  +LG F  A +   + + + PD+
Sbjct: 253 EKEGGWDEATTCFHEALRLDPR---FVEAYYNLGSVLSRLGRFEDAESICRQAITLDPDS 309

Query: 376 CETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTA 435
            E    L     + GQ+ +A+   R+A ++ P     +++L  +L     G   +A   +
Sbjct: 310 AEAHHNLAFALSERGQLTEAETNYRRAIQLKPEFVDPYVNLTSVL--GKFGKLDEAEACS 367

Query: 436 RTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDA 474
           R  ++        E L N+G +  EKG    A  ++++A
Sbjct: 368 REAVRLDPNRS--EALVNLGFVLIEKGHIAEALAAYREA 404



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 72/315 (22%), Positives = 123/315 (39%), Gaps = 48/315 (15%)

Query: 93  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 152
           + +LG +  KQ +  E  +   Q      RI    P T    G LL   G++E+A   F+
Sbjct: 143 HRHLGVLLRKQGKWGEAIVALEQVL----RIKPELPETLNDLGLLLEMTGQLEEAVVRFQ 198

Query: 153 IVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQ 212
             +    +   A    + V    GR  +++   + A+++ P   GA    +G+   K G 
Sbjct: 199 AAIRLRPEFAGAYSNMSVVLKQLGRLDEAITSGREAVRLDPGFAGAHN-NLGVILEKEGG 257

Query: 213 LGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALN 272
             +A   F  AL+LDP  VEA   L  +             + ++ R  +    C  A+ 
Sbjct: 258 WDEATTCFHEALRLDPRFVEAYYNLGSV-------------LSRLGRFEDAESICRQAIT 304

Query: 273 YLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASV 332
                                        P  + +++NLA +   +G   +A   Y  ++
Sbjct: 305 L---------------------------DPDSAEAHHNLAFALSERGQLTEAETNYRRAI 337

Query: 333 KEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQI 392
           +   KP EF+ PY  L  V  K G    A     + + + P+  E L  LG + ++ G I
Sbjct: 338 QL--KP-EFVDPYVNLTSVLGKFGKLDEAEACSREAVRLDPNRSEALVNLGFVLIEKGHI 394

Query: 393 EKAQELLRKAAKIDP 407
            +A    R+A ++DP
Sbjct: 395 AEALAAYREAERVDP 409


>gi|326433206|gb|EGD78776.1| TPR repeat containing protein [Salpingoeca sp. ATCC 50818]
          Length = 609

 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 79/303 (26%), Positives = 129/303 (42%), Gaps = 59/303 (19%)

Query: 203 IGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFE 262
           +GL     G+  +A   FQ+ALQ+                       +R   EK +    
Sbjct: 280 VGLVLNTFGEHDQAIAYFQKALQIR----------------------LRTEGEKGENVAA 317

Query: 263 IYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSH-----SYYNLARSYHS 317
           +Y       + L N +F  GQ+    +  E ALA+      + H     +Y NL  +Y S
Sbjct: 318 LY-------SNLGNVYFSQGQYDKAIEFYEKALAIRVETLGEKHLSTANTYNNLGNAYCS 370

Query: 318 KGDYEKAGLYY---MASVKEI--NKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEI- 371
           KG+Y+K  ++Y   +A   E+  +K       Y  LG      G++ +A+ ++EK L I 
Sbjct: 371 KGEYDKTIVFYDKALAIKLELLGDKHPSTADTYNNLGLAYADKGEYDTAIQHYEKALAIR 430

Query: 372 -------YPDNCETLKALGHIYVQLGQIEKAQELLRKAAKID--------PRDAQAFIDL 416
                  +P   +T   LG+ Y   G+ +KA EL  K   I         P  A ++ +L
Sbjct: 431 VEMLGEKHPSTADTYHNLGNAYADKGEYDKAIELYEKDLTITVEAWGEKHPNTADSYNNL 490

Query: 417 GELLIS-SDTGAALDAFKTARTLL-KKAGEEVPIE--VLNNIGVIHFEKGEFESAHQSFK 472
           G    S  + G A++ ++ A  +  +  GE+ P     L NIG++H E+G+ E A    +
Sbjct: 491 GSAYHSKGEYGKAIELYEKALAIAAETVGEKHPSTAMTLENIGMLHNERGDKEQACAHIQ 550

Query: 473 DAL 475
            AL
Sbjct: 551 QAL 553



 Score = 47.8 bits (112), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 76/308 (24%), Positives = 129/308 (41%), Gaps = 45/308 (14%)

Query: 135 GQLLLAKGEVEQASSAFKIVL------EADR-DNVPALLGQ-ACVEFNRGRYSDSLEFYK 186
           G +L   GE +QA + F+  L      E ++ +NV AL      V F++G+Y  ++EFY+
Sbjct: 281 GLVLNTFGEHDQAIAYFQKALQIRLRTEGEKGENVAALYSNLGNVYFSQGQYDKAIEFYE 340

Query: 187 RALQVHPSCPGAIRLG-------IGLCRYKLGQLGKARQAFQRALQLD--------PENV 231
           +AL +     G   L        +G      G+  K    + +AL +         P   
Sbjct: 341 KALAIRVETLGEKHLSTANTYNNLGNAYCSKGEYDKTIVFYDKALAIKLELLGDKHPSTA 400

Query: 232 EALVALAVMDLQANEAAGIRKGMEK-----MQRAFEIYPYCAMALNYLANHFFFTGQHFL 286
           +    L +      E     +  EK     ++   E +P  A   + L N +   G++  
Sbjct: 401 DTYNNLGLAYADKGEYDTAIQHYEKALAIRVEMLGEKHPSTADTYHNLGNAYADKGEYDK 460

Query: 287 VEQLTETALAVTNHG-----PTKSHSYYNLARSYHSKGDYEKA-GLYYMA---SVKEINK 337
             +L E  L +T        P  + SY NL  +YHSKG+Y KA  LY  A   + + + +
Sbjct: 461 AIELYEKDLTITVEAWGEKHPNTADSYNNLGSAYHSKGEYGKAIELYEKALAIAAETVGE 520

Query: 338 PHEFI-FPYYGLGQVQLKLGDFRSALTNFEKVLEIY-----PDNCETLKALGHIYVQL-G 390
            H         +G +  + GD   A  + ++ L++Y     PD+  T +A+ H   ++ G
Sbjct: 521 KHPSTAMTLENIGMLHNERGDKEQACAHIQQALDVYAITFGPDHPNT-RAVQHNLRRIRG 579

Query: 391 QIEKAQEL 398
              K Q+L
Sbjct: 580 GAVKGQDL 587


>gi|304314872|ref|YP_003850019.1| tetratricopeptide repeat domain-containing protein
           [Methanothermobacter marburgensis str. Marburg]
 gi|302588331|gb|ADL58706.1| tetratricopeptide repeat domain-containing protein
           [Methanothermobacter marburgensis str. Marburg]
          Length = 406

 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 78/300 (26%), Positives = 138/300 (46%), Gaps = 20/300 (6%)

Query: 145 EQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIG 204
           E+A   ++ +L+ +     A   +  V    GRY ++LE Y++AL+++P   GA      
Sbjct: 67  EKALECYEKILKNNPKLAEAWNNKGLVLKELGRYDEALECYEKALKINPKYAGAWN-NKA 125

Query: 205 LCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIY 264
           L   +LG+  +A + +++ALQ++P+  +A      + +   +     K  EK   A E+ 
Sbjct: 126 LVLKELGRYDEALECYEKALQINPKLADAWYNKGSVLIYLKKYKKALKCFEK---AIELN 182

Query: 265 PYCAMALNYLANHFFFTGQHFLVEQLTETALA----VTNHGPTKSHSYYNLARSYHSKGD 320
           P      NY A        H L  ++ E AL     V    P    ++ N    ++  G 
Sbjct: 183 PK-----NYRAWGTKGITLHNL--KIYEEALKCYDKVLQLNPQDDKAWNNKGLVFNELGR 235

Query: 321 YEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLK 380
           Y+++   Y  ++ +IN   +    +   G V  +LG +  AL  +EK LEI P++ +T  
Sbjct: 236 YDESLECYEKAL-QIN--PKLAEAWNNKGVVLSELGRYEEALECYEKALEIDPEDDKTWN 292

Query: 381 ALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLK 440
             G +  +LG+ E A E  +KA +I+P  A A+   G  +I  D     ++ K  +  LK
Sbjct: 293 NKGLVLEELGKYEDALECFQKALEINPEFADAWKWKG--IILEDLKEPEESLKCYKKALK 350



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 93/381 (24%), Positives = 169/381 (44%), Gaps = 44/381 (11%)

Query: 47  AREYFKQGK----VEQFRQILE-EGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIET 101
            R   KQGK    +++FR+ L+   ++PEI                   ++Y  +  ++ 
Sbjct: 23  GRSSLKQGKYKEALKEFRKALKARPNNPEI-------------------LHYNAITLLKL 63

Query: 102 KQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDN 161
           K+ EK      A + Y K  + +      W  KG +L   G  ++A   ++  L+ +   
Sbjct: 64  KRPEK------ALECYEKILKNNPKLAEAWNNKGLVLKELGRYDEALECYEKALKINPKY 117

Query: 162 VPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQ 221
             A   +A V    GRY ++LE Y++ALQ++P    A     G     L +  KA + F+
Sbjct: 118 AGAWNNKALVLKELGRYDEALECYEKALQINPKLADAW-YNKGSVLIYLKKYKKALKCFE 176

Query: 222 RALQLDPENVEAL--VALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFF 279
           +A++L+P+N  A     + + +L+  E A     ++   +  ++ P    A N     F 
Sbjct: 177 KAIELNPKNYRAWGTKGITLHNLKIYEEA-----LKCYDKVLQLNPQDDKAWNNKGLVFN 231

Query: 280 FTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPH 339
             G++    +  E AL +    P  + ++ N        G YE+A   Y  ++ EI+   
Sbjct: 232 ELGRYDESLECYEKALQIN---PKLAEAWNNKGVVLSELGRYEEALECYEKAL-EIDPED 287

Query: 340 EFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELL 399
           +  +   GL  V  +LG +  AL  F+K LEI P+  +  K  G I   L + E++ +  
Sbjct: 288 DKTWNNKGL--VLEELGKYEDALECFQKALEINPEFADAWKWKGIILEDLKEPEESLKCY 345

Query: 400 RKAAKIDPRDAQAFIDLGELL 420
           +KA K++P++   +   G+ L
Sbjct: 346 KKALKLNPQNKTLWYMQGKTL 366



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 84/343 (24%), Positives = 154/343 (44%), Gaps = 18/343 (5%)

Query: 135 GQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS 194
           G+  L +G+ ++A   F+  L+A  +N   L   A       R   +LE Y++ L+ +P 
Sbjct: 23  GRSSLKQGKYKEALKEFRKALKARPNNPEILHYNAITLLKLKRPEKALECYEKILKNNPK 82

Query: 195 CPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGM 254
              A     GL   +LG+  +A + +++AL+++P+   A    A++     E     + +
Sbjct: 83  LAEAWN-NKGLVLKELGRYDEALECYEKALKINPKYAGAWNNKALV---LKELGRYDEAL 138

Query: 255 EKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARS 314
           E  ++A +I P  A A     +   +  ++    +  E A+ +    P    ++     +
Sbjct: 139 ECYEKALQINPKLADAWYNKGSVLIYLKKYKKALKCFEKAIELN---PKNYRAWGTKGIT 195

Query: 315 YHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPD 374
            H+   YE+A L     V ++N   +  +   GL  V  +LG +  +L  +EK L+I P 
Sbjct: 196 LHNLKIYEEA-LKCYDKVLQLNPQDDKAWNNKGL--VFNELGRYDESLECYEKALQINPK 252

Query: 375 NCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKT 434
             E     G +  +LG+ E+A E   KA +IDP D + + + G  L+  + G   DA + 
Sbjct: 253 LAEAWNNKGVVLSELGRYEEALECYEKALEIDPEDDKTWNNKG--LVLEELGKYEDALEC 310

Query: 435 ARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDAL 475
                +KA E  P   +     G+I  +  E E + + +K AL
Sbjct: 311 ----FQKALEINPEFADAWKWKGIILEDLKEPEESLKCYKKAL 349



 Score = 48.5 bits (114), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 77/160 (48%), Gaps = 12/160 (7%)

Query: 87  NALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQ 146
           N  GV  + LG+ E            A + Y KA  ID  +  TW  KG +L   G+ E 
Sbjct: 258 NNKGVVLSELGRYEE-----------ALECYEKALEIDPEDDKTWNNKGLVLEELGKYED 306

Query: 147 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 206
           A   F+  LE + +   A   +  +  +     +SL+ YK+AL+++P     +    G  
Sbjct: 307 ALECFQKALEINPEFADAWKWKGIILEDLKEPEESLKCYKKALKLNPQ-NKTLWYMQGKT 365

Query: 207 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANE 246
             KLG+  +A + ++++L++DPE  +A  AL  + +Q N+
Sbjct: 366 LQKLGKHKEALKCYEKSLKIDPEYKKAKKALKELTIQKNQ 405


>gi|425443888|ref|ZP_18823951.1| Genome sequencing data, contig C313 [Microcystis aeruginosa PCC
           9443]
 gi|389733311|emb|CCI02909.1| Genome sequencing data, contig C313 [Microcystis aeruginosa PCC
           9443]
          Length = 562

 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 75/297 (25%), Positives = 133/297 (44%), Gaps = 27/297 (9%)

Query: 134 KGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHP 193
           +G  LLA GE E A SA++ VL  D ++V A +  A V  ++ RYS++L+ Y R   V+ 
Sbjct: 44  QGDQLLAAGEKESALSAYRTVLSFDENSVQAHIKIAQVLQSQKRYSEALKAYNRGFIVND 103

Query: 194 SCP-----GAIRLGIGLCRYKLGQLGKARQAFQRALQLDPE-NVEALVALAVMDLQA-NE 246
             P         + +G    +  +  +A  A+Q+A+ + P    +  +  A+   Q  +E
Sbjct: 104 KPPMEPSQSNYLVALGDIFAQEEKWSEAIDAYQKAIIIKPTFKAQFQLGKALYSSQRWDE 163

Query: 247 AAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG----P 302
           AA      + +Q A  + P    A       +F+ G+ +  +QL   A           P
Sbjct: 164 AA------KALQAAVFLDPSQGKA-------YFYLGKAYSEQQLWPEASYAYQQALELIP 210

Query: 303 TKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSAL 362
            +  +Y  L  +   +G +E+A   Y  ++    K  +    Y  LG+   + G    A+
Sbjct: 211 NQGETYKKLGETLAKQGKWEEAEQIYRQALIYAPKDGDI---YNYLGEALAEQGKLGEAM 267

Query: 363 TNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGEL 419
             F++  +I P N    + L + Y+  GQI++     R+A +IDP  ++A   L E+
Sbjct: 268 AVFQQARQISPKNANIYENLCYTYIDSGQIDEGLNWCRQAVEIDPNLSEARFILQEI 324


>gi|27499606|gb|AAO17363.1| O-linked GlcNAc transferase [Mus musculus]
          Length = 1046

 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 105/479 (21%), Positives = 190/479 (39%), Gaps = 29/479 (6%)

Query: 142 GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 201
           G+ E A      +   + DN  ALL  + + F   R   S  F   A++ +P    A   
Sbjct: 35  GDFEAAERHCMQLWRQEPDNTGALLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYS- 93

Query: 202 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 261
            +G    + GQL +A + ++ AL+L P+ ++  + LA   + A +  G    ++    A 
Sbjct: 94  NLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEG---AVQAYVSAL 150

Query: 262 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 319
           +  P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G
Sbjct: 151 QYNPDLYCVRS--DLGNLLKALGR---LEEAKACYLKAIETQPNFAVAWSNLGCVFNAQG 205

Query: 320 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 379
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++    
Sbjct: 206 EIWLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVH 262

Query: 380 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGA-ALDAFKTARTL 438
             L  +Y + G I+ A +  R+A ++ P    A+ +L   L    + A A D + TA  L
Sbjct: 263 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRL 322

Query: 439 LKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASAS 498
                +      LNN+  I  E+G  E A + ++ AL       +       +   AS  
Sbjct: 323 CPTHADS-----LNNLANIKREQGNIEEAVRLYRKAL------EVFPEFAAAHSNLASVL 371

Query: 499 MLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDY 558
             Q K  +    ++     + +         N+   L+++ D   A   Y   +     +
Sbjct: 372 QQQGKLQEALMHYKEA---IRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAF 428

Query: 559 VDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFR 617
            DA+  LA+I K   N+  +I     ALK+   +P+A   L        DW    E  +
Sbjct: 429 ADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMK 487



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 87/391 (22%), Positives = 165/391 (42%), Gaps = 34/391 (8%)

Query: 93  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 152
           Y+ LG +  ++ + +E    A ++Y  A R+       ++     L+A G++E A  A+ 
Sbjct: 92  YSNLGNVYKERGQLQE----AIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 147

Query: 153 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 210
             L+ + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 148 SALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIETQPNFAVAWS-NLGCVFNAQ 204

Query: 211 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 270
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 205 GEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAAYLRALSLSPNHAVV 261

Query: 271 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 330
              LA  ++  G   L       A+ +  H P    +Y NLA +   KG   +A   Y  
Sbjct: 262 HGNLACVYYEQGLIDLAIDTYRRAIELQPHFPD---AYCNLANALKEKGSVAEAEDCYNT 318

Query: 331 SVKEINKPHEFIFPYYG-----LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 385
           +++        + P +      L  ++ + G+   A+  + K LE++P+       L  +
Sbjct: 319 ALR--------LCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASV 370

Query: 386 YVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGE 444
             Q G++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +      
Sbjct: 371 LQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA- 429

Query: 445 EVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
               +  +N+  IH + G    A  S++ AL
Sbjct: 430 ----DAHSNLASIHKDSGNIPEAIASYRTAL 456



 Score = 42.0 bits (97), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 76/347 (21%), Positives = 141/347 (40%), Gaps = 57/347 (16%)

Query: 278 FFFTGQHFLVEQLTETA----LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK 333
              +  HF   +L  +A    LA+  + P  + +Y NL   Y  +G  ++A  +Y  +++
Sbjct: 59  LLLSSIHFQCRRLDRSAHFSTLAIKQN-PLLAEAYSNLGNVYKERGQLQEAIEHYRHALR 117

Query: 334 EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIE 393
              KP +FI  Y  L    +  GD   A+  +   L+  PD       LG++   LG++E
Sbjct: 118 L--KP-DFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLE 174

Query: 394 KAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNN 453
           +A+    KA +  P  A A+ +LG                    +    GE         
Sbjct: 175 EAKACYLKAIETQPNFAVAWSNLG-------------------CVFNAQGEIW------- 208

Query: 454 IGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVID-ASASMLQFKDMQLFHRFE 512
           + + HFEK    +   +F DA     ++ L +   +  + D A A+ L+   +       
Sbjct: 209 LAIHHFEKAV--TLDPNFLDA-----YINLGNVLKEARIFDRAVAAYLRALSLS------ 255

Query: 513 NDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKAR 572
              NH  +  N   V +    L++   DT      YR  +     + DAY  LA   K +
Sbjct: 256 --PNHAVVHGNLACVYYEQG-LIDLAIDT------YRRAIELQPHFPDAYCNLANALKEK 306

Query: 573 NNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAA 619
            ++  + +  N AL++   + ++L+ L +++ +  +  +A   +R A
Sbjct: 307 GSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKA 353


>gi|203287653|ref|YP_002222668.1| hypothetical protein BRE_192 [Borrelia recurrentis A1]
 gi|201084873|gb|ACH94447.1| uncharacterized conserved protein [Borrelia recurrentis A1]
          Length = 380

 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 72/318 (22%), Positives = 133/318 (41%), Gaps = 14/318 (4%)

Query: 123 IDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSL 182
           +D+ E S    +G  L+ +  + +A S F  +L+ D DN  AL+G   +E  +  +  ++
Sbjct: 22  LDVTEKSK---RGYQLIKEERLFEAESLFNDILQKDDDNNYALVGLGDIERKKRNFDKAI 78

Query: 183 EFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDL 242
            +Y++ L  H +   A+  G+G C   LG   KA   ++  L+ D +N+  L  +A    
Sbjct: 79  IYYQKCLAKHSNNNYAL-FGLGDCYRSLGDYKKATDVWEEYLKYDSKNITVLTRVAS--- 134

Query: 243 QANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGP 302
              +    +K  +   R  E+ P    AL  +  H ++  + +         +   N   
Sbjct: 135 SYRKLKNFQKSRQSYLRVLELVPDNDYALVGIG-HLYYDFKEYKEALKYWLKMYEINQVK 193

Query: 303 TKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSAL 362
                  ++   Y    ++ K G+Y+     EI+ P+ F +  +GL        ++  AL
Sbjct: 194 IDVRLLTSIGNCYRKLKEFSK-GIYFFKRALEIS-PNNF-YAIFGLADCYRGSKEYAEAL 250

Query: 363 TNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS 422
             +  +++  P N   L  +G  Y  L   E AQ   +KA  +   D   F  LG  L+ 
Sbjct: 251 KYWLTIIDRDPKNNLVLTRVGDTYRYLKDYENAQIYYKKALDV---DFDMFAILGLALLQ 307

Query: 423 SDTGAALDAFKTARTLLK 440
            + G   +A    + L+K
Sbjct: 308 KEQGQYEEALIAIKNLIK 325



 Score = 40.8 bits (94), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 54/232 (23%), Positives = 93/232 (40%), Gaps = 53/232 (22%)

Query: 318 KGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSA---------------- 361
           K +++KA +YY   + + +  +   +  +GLG     LGD++ A                
Sbjct: 71  KRNFDKAIIYYQKCLAKHSNNN---YALFGLGDCYRSLGDYKKATDVWEEYLKYDSKNIT 127

Query: 362 -----------LTNFEK-------VLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAA 403
                      L NF+K       VLE+ PDN   L  +GH+Y    + ++A +   K  
Sbjct: 128 VLTRVASSYRKLKNFQKSRQSYLRVLELVPDNDYALVGIGHLYYDFKEYKEALKYWLKMY 187

Query: 404 KIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGE 463
           +I+    Q  ID+  L    +    L  F       K+A E  P    NN   I F   +
Sbjct: 188 EIN----QVKIDVRLLTSIGNCYRKLKEFSKGIYFFKRALEISP----NNFYAI-FGLAD 238

Query: 464 FESAHQSFKDALGDGIWLTLLDSKTK-----TYVIDASASMLQFKDMQLFHR 510
                + + +AL    WLT++D   K     T V D    +  +++ Q++++
Sbjct: 239 CYRGSKEYAEAL--KYWLTIIDRDPKNNLVLTRVGDTYRYLKDYENAQIYYK 288


>gi|365880537|ref|ZP_09419902.1| putative TPR repeat protein [Bradyrhizobium sp. ORS 375]
 gi|365291400|emb|CCD92433.1| putative TPR repeat protein [Bradyrhizobium sp. ORS 375]
          Length = 1409

 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 68/288 (23%), Positives = 128/288 (44%), Gaps = 10/288 (3%)

Query: 132  VGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQV 191
            V   + L ++GE+  A   FK++L     N  AL+G   +     R  ++ ++++RA+ V
Sbjct: 785  VAVAKKLQSRGEINDAEQIFKLILAGQPTNFDALVGLGMISTTFNRLDEAKDYFQRAVAV 844

Query: 192  HPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIR 251
            +     A    IG      G+   A + ++ AL L P +   L   A+  ++ N+   I 
Sbjct: 845  NDKSAEA-HGSIGAVEGSAGRYDAAVKHYETALSLSPSHPGILYGFAM--VRQNQGL-ID 900

Query: 252  KGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNL 311
            + M  ++RA +  P    A   L N  + TG+     +     L V +  P  + ++ N+
Sbjct: 901  EAMVLLRRAIDNKPQHLDAHFALGNLLYTTGKDV---EAARHYLKVLDFSPEHAETHNNI 957

Query: 312  ARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEI 371
            A     +G  E+A  +Y  ++    +P ++   Y  LG   L+L     ++      ++I
Sbjct: 958  ANVLLRQGHRERAIEHYKRAIA--GRP-DYGDAYGNLGNAFLELNRLEESIEQNLLAIKI 1014

Query: 372  YPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGEL 419
             P+   +   LG  Y  LG+ E+A    +KA ++ P DA   ++L  +
Sbjct: 1015 KPERFGSYNNLGVAYQALGRFEEATAAFQKALELAPDDASIHLNLANM 1062



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 74/307 (24%), Positives = 122/307 (39%), Gaps = 48/307 (15%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPAL--LGQAC 170
           A Q+   A  ID   P      G  L   G+ E+A S  +  L A      A   LG  C
Sbjct: 136 AVQHLELALAIDDTNPDLHQALGLALQRLGQFERAMSHHEAALAARPQFAAAAGSLGDVC 195

Query: 171 VEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPEN 230
            +   GR+S+++  Y RAL + P  P  + L +G C   +G+L  A +  QRAL+++P  
Sbjct: 196 RQL--GRHSEAIAHYVRALAIEPKMP-MVLLNLGGCHQAIGELDAAIRTLQRALEMNPRL 252

Query: 231 VEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQL 290
            EA   L  + L      G    +   +RA  + P    A N   N    +G+H      
Sbjct: 253 AEAHYNLGNIHLDMKSWPG---ALFHYERAVTLRPDFPEAHNNFGNALESSGRH------ 303

Query: 291 TETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQ 350
            E AL           S+Y+ A     + DY  A      S++ + +             
Sbjct: 304 -EEAL-----------SHYHEA--LRLRPDYAVAHRNRADSLRNVQR------------- 336

Query: 351 VQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDA 410
                  +  A+T ++  LE  P +  T+  L  +   +G++++A+     A  ++PR  
Sbjct: 337 -------YDEAITGYQAALEHDPRDTTTMNHLAIVLTIVGRLDEARRTYEAALAVNPRSI 389

Query: 411 QAFIDLG 417
              ++ G
Sbjct: 390 GTHLNYG 396



 Score = 53.9 bits (128), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 63/267 (23%), Positives = 118/267 (44%), Gaps = 17/267 (6%)

Query: 211  GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 270
            G++  A Q F+  L   P N +ALV L ++    N    + +  +  QRA  +    A A
Sbjct: 795  GEINDAEQIFKLILAGQPTNFDALVGLGMISTTFNR---LDEAKDYFQRAVAVNDKSAEA 851

Query: 271  LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 330
               +       G++    +  ETAL+++   P+     Y  A    ++G  ++A +    
Sbjct: 852  HGSIGAVEGSAGRYDAAVKHYETALSLS---PSHPGILYGFAMVRQNQGLIDEAMVLLRR 908

Query: 331  SVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLG 390
            ++   NKP + +  ++ LG +    G    A  ++ KVL+  P++ ET   + ++ ++ G
Sbjct: 909  AID--NKP-QHLDAHFALGNLLYTTGKDVEAARHYLKVLDFSPEHAETHNNIANVLLRQG 965

Query: 391  QIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTA--RTLLKKAGEEVPI 448
              E+A E  ++A    P    A+ +LG   +       L+  + +  + LL    +    
Sbjct: 966  HRERAIEHYKRAIAGRPDYGDAYGNLGNAFLE------LNRLEESIEQNLLAIKIKPERF 1019

Query: 449  EVLNNIGVIHFEKGEFESAHQSFKDAL 475
               NN+GV +   G FE A  +F+ AL
Sbjct: 1020 GSYNNLGVAYQALGRFEEATAAFQKAL 1046



 Score = 42.0 bits (97), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 62/129 (48%), Gaps = 6/129 (4%)

Query: 348 LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 407
           LG V  +LG    A+ ++ + L I P     L  LG  +  +G+++ A   L++A +++P
Sbjct: 191 LGDVCRQLGRHSEAIAHYVRALAIEPKMPMVLLNLGGCHQAIGELDAAIRTLQRALEMNP 250

Query: 408 RDAQAFIDLGELLISSDT-GAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFES 466
           R A+A  +LG + +   +   AL  ++ A TL      + P E  NN G      G  E 
Sbjct: 251 RLAEAHYNLGNIHLDMKSWPGALFHYERAVTLRP----DFP-EAHNNFGNALESSGRHEE 305

Query: 467 AHQSFKDAL 475
           A   + +AL
Sbjct: 306 ALSHYHEAL 314


>gi|406982607|gb|EKE03902.1| TPR Domain containing protein [uncultured bacterium]
          Length = 666

 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 61/248 (24%), Positives = 113/248 (45%), Gaps = 10/248 (4%)

Query: 132 VGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQV 191
             KG  L    + ++A   +   LE + D+  AL G+A      G Y+ ++E Y++A+ V
Sbjct: 414 TAKGNELSINKQYDEALVLYNKALENNPDDFYALSGRANAFQKIGNYNTAIENYEKAI-V 472

Query: 192 HPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIR 251
             S    + L  G    K  +  +A+ A+++AL++DP +  A + +  +  +  E   + 
Sbjct: 473 QDSSNKDLFLAFGNSLMKSNKTTEAKGAYEKALEIDPASSSAYIGIGDVHYKNQE---LN 529

Query: 252 KGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNL 311
           K  +   +A ++      AL  L N +    +    +   E  L +    P   ++ YNL
Sbjct: 530 KATDAYNKALDLDRRNVGALIKLGNIYKEKNRLLEAQNYYERTLEI---DPANINAKYNL 586

Query: 312 ARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEI 371
           A      GD ++A  YY   ++      EF   YY L  V  K  D+++A+ N+E+ L +
Sbjct: 587 ALILVEFGDTKQAKTYYQQIIQS---SPEFPEVYYALAIVNEKERDYKNAIANYEQYLTL 643

Query: 372 YPDNCETL 379
            P++  +L
Sbjct: 644 LPNDDSSL 651



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 64/125 (51%), Gaps = 1/125 (0%)

Query: 117 YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 176
           Y KA  ID    S ++G G +     E+ +A+ A+   L+ DR NV AL+    +   + 
Sbjct: 501 YEKALEIDPASSSAYIGIGDVHYKNQELNKATDAYNKALDLDRRNVGALIKLGNIYKEKN 560

Query: 177 RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVA 236
           R  ++  +Y+R L++ P+   A +  + L   + G   +A+  +Q+ +Q  PE  E   A
Sbjct: 561 RLLEAQNYYERTLEIDPANINA-KYNLALILVEFGDTKQAKTYYQQIIQSSPEFPEVYYA 619

Query: 237 LAVMD 241
           LA+++
Sbjct: 620 LAIVN 624



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 63/135 (46%), Gaps = 4/135 (2%)

Query: 302 PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSA 361
           P  +  Y ++        DY+ A   YM +   ++    + + Y  +  ++   GD   A
Sbjct: 95  PDDAFIYISIGNILQENNDYDNALNAYMQA---LDIAPTYKYNYLNIAIIKNMKGDTDGA 151

Query: 362 LTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGE-LL 420
           +  ++K L  YPD+ ET K L  IY+ L + EKA E       I+P + + + + G+ LL
Sbjct: 152 IDYYKKFLTYYPDHTETRKNLASIYLALNKPEKAIEEYEIILNINPNNFKEYANYGKALL 211

Query: 421 ISSDTGAALDAFKTA 435
           +      A+D  KTA
Sbjct: 212 LVKQYVKAIDVLKTA 226



 Score = 42.4 bits (98), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 56/236 (23%), Positives = 97/236 (41%), Gaps = 22/236 (9%)

Query: 196 PGAIR-LGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGM 254
           P A+R     L  Y +  L  A++  Q A++L P   +AL+ + +  + + E    R+ +
Sbjct: 28  PTALRHYNNALTLYSIHDLQGAKEELQLAIKLSPG--DALIHIKLAGILS-EMGLWRESL 84

Query: 255 EKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARS 314
           ++   A  + P  A     + N       +         AL +    PT  ++Y N+A  
Sbjct: 85  KEYTEAARLKPDDAFIYISIGNILQENNDYDNALNAYMQALDI---APTYKYNYLNIAII 141

Query: 315 YHSKGD------YEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKV 368
            + KGD      Y K  L Y     E  K          L  + L L     A+  +E +
Sbjct: 142 KNMKGDTDGAIDYYKKFLTYYPDHTETRK---------NLASIYLALNKPEKAIEEYEII 192

Query: 369 LEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSD 424
           L I P+N +     G   + + Q  KA ++L+ A   +P DA+A  +L    I+++
Sbjct: 193 LNINPNNFKEYANYGKALLLVKQYVKAIDVLKTAIAKNPNDAEAHANLAIAYINTN 248



 Score = 42.0 bits (97), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 126/593 (21%), Positives = 232/593 (39%), Gaps = 94/593 (15%)

Query: 178 YSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVAL 237
           Y ++L  Y +AL + P+      L I + +   G    A   +++ L   P++ E    L
Sbjct: 114 YDNALNAYMQALDIAPTYKYNY-LNIAIIKNMKGDTDGAIDYYKKFLTYYPDHTETRKNL 172

Query: 238 AVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAV 297
           A + L  N+     K +E+ +    I P                 Q+     + +TA+A 
Sbjct: 173 ASIYLALNKP---EKAIEEYEIILNINPNNFKEYANYGKALLLVKQYVKAIDVLKTAIA- 228

Query: 298 TNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGD 357
               P  + ++ NLA +Y +      A   Y+ ++K     H   F    L  +  K+G 
Sbjct: 229 --KNPNDAEAHANLAIAYINTNRKPDAVNEYLIALKINPALHNARF---DLANLLTKMGK 283

Query: 358 FRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 417
              A+ ++E  +   PD+      L  +Y    Q++KA   L+ A  + P D    I++ 
Sbjct: 284 TDEAILHYEAYIAALPDDHAAHYNLAVLYQNKNQLDKAIAGLQTALGLKPDD----INIK 339

Query: 418 ELLISSDTGAALDAFKTARTLLKKAG---------EEVPIEVLNNIGVIHFEKGEFESAH 468
           + L  S        +  A+   K  G         ++ P E+  NI + +    +++ A 
Sbjct: 340 QELARS--------YHLAKNYEKAIGLYSEVLQSKKDDP-ELYYNIALAYHSDKKYDQAI 390

Query: 469 QSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVL 528
           ++++ +      + L D+K    V    A  L  K  +L          +   +++  VL
Sbjct: 391 ENYEKS------ILLKDNKN---VKSDFAKALTAKGNEL---------SINKQYDEALVL 432

Query: 529 FNLARLLEQIHDTVAASVLYRLILFK----YQDYVDAYLRLAAIAKARNNLQLSIELVNE 584
           +N A  LE   D   A +  R   F+    Y   ++ Y +  AI +  +N  L +   N 
Sbjct: 433 YNKA--LENNPDDFYA-LSGRANAFQKIGNYNTAIENYEK--AIVQDSSNKDLFLAFGNS 487

Query: 585 ALKVN------GKYPNALSM----------LGDLELKNDDWVKAKETFRAASDATDGKDS 628
            +K N      G Y  AL +          +GD+  KN +  KA + +  A D  D ++ 
Sbjct: 488 LMKSNKTTEAKGAYEKALEIDPASSSAYIGIGDVHYKNQELNKATDAYNKALD-LDRRNV 546

Query: 629 YATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEK 688
            A + LGN                E   L +A+  Y R +    +N+ A     ++L E 
Sbjct: 547 GALIKLGNI-------------YKEKNRLLEAQNYYERTLEIDPANINAKYNLALILVEF 593

Query: 689 GQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCL 741
           G    +K  + Q+ +++      + P+V+  LA V   + ++  A+  Y+  L
Sbjct: 594 GDTKQAKTYYQQIIQSSP-----EFPEVYYALAIVNEKERDYKNAIANYEQYL 641



 Score = 41.6 bits (96), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 75/336 (22%), Positives = 144/336 (42%), Gaps = 32/336 (9%)

Query: 177 RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQL-DPENVEALV 235
            Y  ++  Y   LQ     P  +   I L  +   +  +A + +++++ L D +NV++  
Sbjct: 351 NYEKAIGLYSEVLQSKKDDP-ELYYNIALAYHSDKKYDQAIENYEKSILLKDNKNVKSDF 409

Query: 236 ALAVMDLQANEAAGIRKGMEKM---QRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTE 292
           A A +  + NE +  ++  E +    +A E  P    AL+  AN F   G +    +  E
Sbjct: 410 AKA-LTAKGNELSINKQYDEALVLYNKALENNPDDFYALSGRANAFQKIGNYNTAIENYE 468

Query: 293 TALAVTNHGPTK----SHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGL 348
            A+   +          +S     ++  +KG YEKA     AS             Y G+
Sbjct: 469 KAIVQDSSNKDLFLAFGNSLMKSNKTTEAKGAYEKALEIDPASSS----------AYIGI 518

Query: 349 GQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPR 408
           G V  K  +   A   + K L++   N   L  LG+IY +  ++ +AQ    +  +IDP 
Sbjct: 519 GDVHYKNQELNKATDAYNKALDLDRRNVGALIKLGNIYKEKNRLLEAQNYYERTLEIDPA 578

Query: 409 DAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESA 467
           +  A  +L  +L+   DT  A    KT    + ++  E P EV   + +++ ++ ++++A
Sbjct: 579 NINAKYNLALILVEFGDTKQA----KTYYQQIIQSSPEFP-EVYYALAIVNEKERDYKNA 633

Query: 468 HQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFK 503
             +++       +LTLL +   +  +     M++ K
Sbjct: 634 IANYEQ------YLTLLPNDDSSLNVKIRLEMIKNK 663


>gi|406980754|gb|EKE02316.1| hypothetical protein ACD_20C00399G0001 [uncultured bacterium]
          Length = 614

 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 91/388 (23%), Positives = 163/388 (42%), Gaps = 34/388 (8%)

Query: 57  EQFRQILEEGS--SPEIDEYYA---DVRYERIAILNALGVYYTYLGKIETKQREKEEHFI 111
           + F++IL + S  +  + EY A   D      A +N  G++    G I+           
Sbjct: 3   DHFKKILNKVSKLNDSVTEYKAASKDTYIPSKAFVN-WGIFLANTGDIDQ---------- 51

Query: 112 LATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPA--LLGQA 169
            A + +  +S +    P ++   G  L  K + E+A   F   ++ D +   A  L   A
Sbjct: 52  -AIEKFESSSHMGPKNPESFTNWGIALAKKNKYEEAIEKFIAAIKIDSEYARAYSLWAAA 110

Query: 170 CVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPE 229
            VE   G   ++ + Y+ A++++P       +G G+   K  +   A + F+RAL ++P 
Sbjct: 111 LVEL--GNMDEAEKRYEIAIKLNPKDIDT-YIGWGVALAKQNKKLLAEEKFKRALTINPR 167

Query: 230 NVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQ 289
           + +AL    V+    +E     + +E+ +    I P  A   +Y +       +H   E 
Sbjct: 168 STQALFFWGVI---LSELEKYNEAIERFETVNNIQPNNADVFHYWSIALSRLDRH--DEA 222

Query: 290 LTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA-GLYYMASVKEINKPHEFIFPYYGL 348
           L +  +A+ N  P K   +  L  +  + G Y++A   Y  A     N P      Y   
Sbjct: 223 LEKIKIAL-NINPVKVEPHIQLGETLTALGRYDEAIECYKTAETINSNLPD----LYLAW 277

Query: 349 GQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPR 408
           G    K G+   A++   K + +      TL  L     ++G+ ++A  LL +   IDPR
Sbjct: 278 GITLQKYGEHFEAVSKLSKAISLQEKKAATLYYLAISLAEIGEHQRAITLLEEVLTIDPR 337

Query: 409 DAQAFIDLGELL-ISSDTGAALDAFKTA 435
            + AF+ LG +  I  D   A++ +K A
Sbjct: 338 YSDAFVKLGSIYNILKDHHKAIECYKNA 365



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 79/354 (22%), Positives = 139/354 (39%), Gaps = 43/354 (12%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
           A + Y  A +++  +  T++G G  L  + +   A   FK  L  +  +  AL     + 
Sbjct: 120 AEKRYEIAIKLNPKDIDTYIGWGVALAKQNKKLLAEEKFKRALTINPRSTQALFFWGVIL 179

Query: 173 FNRGRYSDSLEFYKRALQVHPSCPGAIR-LGIGLCRYKLGQLGKARQAFQRALQLDPENV 231
               +Y++++E ++    + P+         I L R  L +  +A +  + AL ++P  V
Sbjct: 180 SELEKYNEAIERFETVNNIQPNNADVFHYWSIALSR--LDRHDEALEKIKIALNINPVKV 237

Query: 232 E-------ALVALAVMD-----------LQANE-----AAGIR--------KGMEKMQRA 260
           E        L AL   D           + +N      A GI         + + K+ +A
Sbjct: 238 EPHIQLGETLTALGRYDEAIECYKTAETINSNLPDLYLAWGITLQKYGEHFEAVSKLSKA 297

Query: 261 FEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGD 320
             +    A  L YLA      G+H     L E  L +    P  S ++  L   Y+   D
Sbjct: 298 ISLQEKKAATLYYLAISLAEIGEHQRAITLLEEVLTI---DPRYSDAFVKLGSIYNILKD 354

Query: 321 YEKAGLYYMASVK-EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 379
           + KA   Y  +V   I   H      Y +      LGD+ +A+  + K +E  P+N +  
Sbjct: 355 HHKAIECYKNAVNTSIKNSH----ANYLIAVTYNSLGDYANAIKYYNKTIETNPENIDAY 410

Query: 380 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFK 433
             L  I  + G I++A   +R A + +P   +     G +++S D     DA +
Sbjct: 411 VNLAVILSETGDIKEAVRNMRIAFRKEPNSCKINTIYG-VILSKDESTYKDALE 463



 Score = 45.8 bits (107), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 29/110 (26%), Positives = 56/110 (50%), Gaps = 14/110 (12%)

Query: 91  VYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSA 150
           +Y   L K E+  ++  E F       + A +ID    + +VGKG++L+      +A S 
Sbjct: 446 IYGVILSKDESTYKDALEKF-------DNAIKIDSDASTAYVGKGEILIRLMRFNEAIST 498

Query: 151 FKIVLEADRDNVPA--LLGQACVEF-----NRGRYSDSLEFYKRALQVHP 193
           +  +L  + +N+ A  +LG   +EF     N+  Y ++LE + + L+++P
Sbjct: 499 YNEILVKNPNNISAMFMLGVTYIEFADSSNNQAYYHNALECFNKTLKINP 548


>gi|334118716|ref|ZP_08492804.1| Tetratricopeptide TPR_1 repeat-containing protein [Microcoleus
           vaginatus FGP-2]
 gi|333458946|gb|EGK87561.1| Tetratricopeptide TPR_1 repeat-containing protein [Microcoleus
           vaginatus FGP-2]
          Length = 1483

 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 65/284 (22%), Positives = 130/284 (45%), Gaps = 12/284 (4%)

Query: 138 LLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPG 197
            L +G+++ A +A +  ++   D + A +         G+   ++  Y +AL++ P+   
Sbjct: 682 FLVQGKIKDAIAACQQAIKIRPDFIHAYVTLGNALQAEGKNEAAIRSYSQALELRPNF-A 740

Query: 198 AIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKM 257
            +R  IG   +K+G+L +A   +Q+A+ L+P+   A   L  +     +   I+  +   
Sbjct: 741 EVRANIGSMYFKMGRLEEAIAHYQQAIALNPDLAGAHWNLGKV---YQKHGNIQAAIACF 797

Query: 258 QRAFEIYPYCAMALNY--LANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSY 315
           +R  E+ P    A  +  L N  F  G+     +  E A+A+    P  + +Y N+    
Sbjct: 798 KRTSELNPQLVGADFHFNLGNRLFSQGKRDEAIECYEKAIAIK---PDWAEAYGNIGSVR 854

Query: 316 HSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDN 375
             +G+ + A  YY  +V    KP   +  ++ +    L+   +  A+TN+   L+I PD 
Sbjct: 855 SQQGNLDAAIAYYQKAVAL--KPQLEVL-HFNIANSFLQQNKYDEAITNYRNTLKIKPDW 911

Query: 376 CETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGEL 419
            E    LG  +  LG++E+A    ++A  + P  A+ +  +G +
Sbjct: 912 PEVHANLGSCFSMLGRLEEALASYQQALALKPDWAEVYCRMGHI 955



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 108/515 (20%), Positives = 196/515 (38%), Gaps = 68/515 (13%)

Query: 140 AKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAI 199
           A+G++E A  A+   LE       A      + +  G+   +  +Y++AL ++P    ++
Sbjct: 490 AQGQLEMAIQAYLQALEIQPKFAEASANLGSMYYKLGQLEQAANYYQKALAINPQL-SSV 548

Query: 200 RLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQR 259
            L +G    +  +L  A   +Q+ LQ  P +  A   L+ +  Q          +E    
Sbjct: 549 NLMLGSVLQQQEKLDAAIACYQKVLQQQPGDASAAEKLSSLLAQKQRETTDSNFIELETE 608

Query: 260 AFEIYPYCA----------MALNYLAN------HFFFTGQHFLVEQLTETALAVTNHGPT 303
           + E  P              ++N          +  FT    L EQ+T  +L V + G  
Sbjct: 609 SGEAQPVSVNKDEGYGLQPSSINLPPAPTTETLNTPFTNPAELSEQVT--SLNVPDSGQV 666

Query: 304 KS----HSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFR 359
            +      Y  LA ++  +G  + A     A  + I    +FI  Y  LG      G   
Sbjct: 667 ANFKEVEPYKKLAENFLVQGKIKDA---IAACQQAIKIRPDFIHAYVTLGNALQAEGKNE 723

Query: 360 SALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGEL 419
           +A+ ++ + LE+ P+  E    +G +Y ++G++E+A    ++A  ++P  A A  +LG++
Sbjct: 724 AAIRSYSQALELRPNFAEVRANIGSMYFKMGRLEEAIAHYQQAIALNPDLAGAHWNLGKV 783

Query: 420 LIS-SDTGAALDAFKTARTL-----------------------------LKKAGEEVP-- 447
                +  AA+  FK    L                              +KA    P  
Sbjct: 784 YQKHGNIQAAIACFKRTSELNPQLVGADFHFNLGNRLFSQGKRDEAIECYEKAIAIKPDW 843

Query: 448 IEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQL 507
            E   NIG +  ++G  ++A   ++ A+        L  + +    + + S LQ      
Sbjct: 844 AEAYGNIGSVRSQQGNLDAAIAYYQKAVA-------LKPQLEVLHFNIANSFLQQNKYD- 895

Query: 508 FHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAA 567
                N  N +++  +   V  NL      +     A   Y+  L    D+ + Y R+  
Sbjct: 896 -EAITNYRNTLKIKPDWPEVHANLGSCFSMLGRLEEALASYQQALALKPDWAEVYCRMGH 954

Query: 568 IAKARNNLQLSIELVNEALKVNGKYPNALSMLGDL 602
           I K    L+ +I    +A++ N KY  A   L DL
Sbjct: 955 IQKQDKPLE-AIANFEKAIQCNPKYSEAYQQLCDL 988



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 59/119 (49%), Gaps = 3/119 (2%)

Query: 302 PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSA 361
           P  +  +  LA  Y  +G++EKA      ++K   KP +F   Y  +G  Q   G    A
Sbjct: 441 PGDAEVHKKLAEVYVLQGEFEKAIASCNLAIK--FKP-DFAAAYLTMGNAQHAQGQLEMA 497

Query: 362 LTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 420
           +  + + LEI P   E    LG +Y +LGQ+E+A    +KA  I+P+ +   + LG +L
Sbjct: 498 IQAYLQALEIQPKFAEASANLGSMYYKLGQLEQAANYYQKALAINPQLSSVNLMLGSVL 556



 Score = 48.5 bits (114), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 56/121 (46%), Gaps = 6/121 (4%)

Query: 356 GDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFID 415
           GD   A+ N++K LE+ P + E  K L  +YV  G+ EKA      A K  P  A A++ 
Sbjct: 424 GDLGGAIENYQKALELNPGDAEVHKKLAEVYVLQGEFEKAIASCNLAIKFKPDFAAAYLT 483

Query: 416 LGELL-ISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDA 474
           +G           A+ A+  A  +  K  E        N+G ++++ G+ E A   ++ A
Sbjct: 484 MGNAQHAQGQLEMAIQAYLQALEIQPKFAEASA-----NLGSMYYKLGQLEQAANYYQKA 538

Query: 475 L 475
           L
Sbjct: 539 L 539



 Score = 47.0 bits (110), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 87/369 (23%), Positives = 151/369 (40%), Gaps = 36/369 (9%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
           A + Y KA  ++  +        ++ + +GE E+A ++  + ++   D   A L     +
Sbjct: 429 AIENYQKALELNPGDAEVHKKLAEVYVLQGEFEKAIASCNLAIKFKPDFAAAYLTMGNAQ 488

Query: 173 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 232
             +G+   +++ Y +AL++ P    A    +G   YKLGQL +A   +Q+AL ++P+   
Sbjct: 489 HAQGQLEMAIQAYLQALEIQPKFAEA-SANLGSMYYKLGQLEQAANYYQKALAINPQLSS 547

Query: 233 ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMAL----NYLANHFFFTGQHFLVE 288
             + L  + LQ  E   +   +   Q+  +  P  A A     + LA     T     +E
Sbjct: 548 VNLMLGSV-LQQQEK--LDAAIACYQKVLQQQPGDASAAEKLSSLLAQKQRETTDSNFIE 604

Query: 289 QLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGL 348
             TE+  A            Y L  S           L    + + +N P  F  P    
Sbjct: 605 LETESGEA--QPVSVNKDEGYGLQPS--------SINLPPAPTTETLNTP--FTNPAELS 652

Query: 349 GQV-QLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 407
            QV  L + D    + NF++V        E  K L   ++  G+I+ A    ++A KI P
Sbjct: 653 EQVTSLNVPD-SGQVANFKEV--------EPYKKLAENFLVQGKIKDAIAACQQAIKIRP 703

Query: 408 RDAQAFIDLGELLISSDTG-AALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFES 466
               A++ LG  L +     AA+ ++  A  L          EV  NIG ++F+ G  E 
Sbjct: 704 DFIHAYVTLGNALQAEGKNEAAIRSYSQALELRPNFA-----EVRANIGSMYFKMGRLEE 758

Query: 467 AHQSFKDAL 475
           A   ++ A+
Sbjct: 759 AIAHYQQAI 767


>gi|148230096|ref|NP_001087833.1| O-linked N-acetylglucosamine (GlcNAc) transferase [Xenopus laevis]
 gi|51949982|gb|AAH82353.1| Ogt-prov protein [Xenopus laevis]
          Length = 1063

 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 104/478 (21%), Positives = 192/478 (40%), Gaps = 27/478 (5%)

Query: 142 GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 201
           G+ E A      +   + DN   LL  + + F   R   S  F   A++ +P    A   
Sbjct: 35  GDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYS- 93

Query: 202 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 261
            +G    + GQL +A + ++ AL+L P+ ++  + LA   + A +  G    ++    A 
Sbjct: 94  NLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEG---AVQAYVSAL 150

Query: 262 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 319
           +  P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G
Sbjct: 151 QYNPDLYCVRS--DLGNLLKALGR---LEEAKACYLKAIETQPNFAVAWSNLGCVFNAQG 205

Query: 320 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 379
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++    
Sbjct: 206 EIWLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVH 262

Query: 380 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLL 439
             L  +Y + G I+ A +  R+A ++ P    A+ +L   L   + G+ +DA +   T L
Sbjct: 263 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANAL--KEKGSVVDAEECYNTAL 320

Query: 440 KKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASM 499
           +        + LNN+  I  E+G  E A + ++ AL   ++     + +    +      
Sbjct: 321 RLCPTHA--DSLNNLANIKREQGNIEEAVRLYRKALE--VFPEFAAAHSNLASVLQQQGK 376

Query: 500 LQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYV 559
           LQ     L H  E     + +         N+   L+++ D   A   Y   +     + 
Sbjct: 377 LQ---EALMHYKEA----IRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA 429

Query: 560 DAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFR 617
           DA+  LA+I K   N+  +I     ALK+   +P+A   L        DW    E  +
Sbjct: 430 DAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMK 487



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 87/391 (22%), Positives = 164/391 (41%), Gaps = 34/391 (8%)

Query: 93  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 152
           Y+ LG +  ++ + +E    A ++Y  A R+       ++     L+A G++E A  A+ 
Sbjct: 92  YSNLGNVYKERGQLQE----AIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 147

Query: 153 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 210
             L+ + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 148 SALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIETQPNFAVAWS-NLGCVFNAQ 204

Query: 211 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 270
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 205 GEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAAYLRALSLSPNHAVV 261

Query: 271 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 330
              LA  ++  G   L       A+ +  H P    +Y NLA +   KG    A   Y  
Sbjct: 262 HGNLACVYYEQGLIDLAIDTYRRAIELQPHFPD---AYCNLANALKEKGSVVDAEECYNT 318

Query: 331 SVKEINKPHEFIFPYYG-----LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 385
           +++        + P +      L  ++ + G+   A+  + K LE++P+       L  +
Sbjct: 319 ALR--------LCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASV 370

Query: 386 YVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGE 444
             Q G++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +      
Sbjct: 371 LQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA- 429

Query: 445 EVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
               +  +N+  IH + G    A  S++ AL
Sbjct: 430 ----DAHSNLASIHKDSGNIPEAIASYRTAL 456



 Score = 42.7 bits (99), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 77/347 (22%), Positives = 141/347 (40%), Gaps = 57/347 (16%)

Query: 278 FFFTGQHFLVEQLTETA----LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK 333
              +  HF   +L  +A    LA+  + P  + +Y NL   Y  +G  ++A  +Y  +++
Sbjct: 59  LLLSSIHFQCRRLDRSAHFSTLAIKQN-PLLAEAYSNLGNVYKERGQLQEAIEHYRHALR 117

Query: 334 EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIE 393
              KP +FI  Y  L    +  GD   A+  +   L+  PD       LG++   LG++E
Sbjct: 118 L--KP-DFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLE 174

Query: 394 KAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNN 453
           +A+    KA +  P  A A+ +LG                    +    GE         
Sbjct: 175 EAKACYLKAIETQPNFAVAWSNLG-------------------CVFNAQGEIW------- 208

Query: 454 IGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVID-ASASMLQFKDMQLFHRFE 512
           + + HFEK    +   +F DA     ++ L +   +  + D A A+ L+   +       
Sbjct: 209 LAIHHFEKAV--TLDPNFLDA-----YINLGNVLKEARIFDRAVAAYLRALSLS------ 255

Query: 513 NDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKAR 572
              NH  +  N   V +    L++   DT      YR  +     + DAY  LA   K +
Sbjct: 256 --PNHAVVHGNLACVYYEQG-LIDLAIDT------YRRAIELQPHFPDAYCNLANALKEK 306

Query: 573 NNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAA 619
            ++  + E  N AL++   + ++L+ L +++ +  +  +A   +R A
Sbjct: 307 GSVVDAEECYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKA 353


>gi|409993902|ref|ZP_11277028.1| hypothetical protein APPUASWS_22358 [Arthrospira platensis str.
           Paraca]
 gi|409935250|gb|EKN76788.1| hypothetical protein APPUASWS_22358 [Arthrospira platensis str.
           Paraca]
          Length = 917

 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 57/241 (23%), Positives = 108/241 (44%), Gaps = 10/241 (4%)

Query: 174 NRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEA 233
           N G + +++ FY++A+ + P+    +   +G+  +  G +  A   +Q+A+ L+P+  EA
Sbjct: 84  NMGWFDEAISFYQQAIDLSPNW-ADLHYHLGMTWHWQGNIEGAIGCYQKAIALNPKLGEA 142

Query: 234 LVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTET 293
            + +A   L+ NE   I   ++ +Q      P      N L    +   Q   +++    
Sbjct: 143 YLDMA---LRLNERGDINTAIKVLQEGRINCPNFKEIFNTLG---YLQLQQNQIDEAIAI 196

Query: 294 ALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQL 353
                +  PT+   Y NL  ++  +G   +A   Y    K I+   +    Y  LG++  
Sbjct: 197 FQEALSIDPTEPLVYNNLGWAFARQGKLSEAIAAYH---KAISLKPDLAIAYSNLGKLWQ 253

Query: 354 KLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAF 413
              + R A+T F+K + I PDN       G+  + +G + +A    +KA  IDP+  Q +
Sbjct: 254 HKNNHRQAITYFQKAIAIEPDNIMFYSDCGNSCLIIGCLSQAMACFQKAIAIDPKFVQGY 313

Query: 414 I 414
           I
Sbjct: 314 I 314


>gi|340052786|emb|CCC47071.1| conserved hypothetical protein, fragment [Trypanosoma vivax Y486]
          Length = 1158

 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 72/306 (23%), Positives = 129/306 (42%), Gaps = 35/306 (11%)

Query: 114 TQYYNKASRIDMHEPSTWVGKGQLLLAKGE-VEQASSAFKIVLEADRDNVPALLGQACVE 172
           + Y    S   MH       +G   +A G  ++ AS  F+    AD   V A LG A V 
Sbjct: 67  SSYMADVSSSHMHNAVVLYLEGLAAMASGTGLQTASVKFEEASRADPHFVIARLGLAAVH 126

Query: 173 FNRGRYSDSLEFYKRALQVHPS-CPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENV 231
           + RG Y +S   Y+  LQ   S  P  +R+G+GLC Y+L +L  A++  +RAL+++ ++ 
Sbjct: 127 YYRGHYKESFSQYRVVLQTLGSKAPPIVRVGMGLCAYRLNRLDYAQKMLERALEVNSDDE 186

Query: 232 EALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLT 291
            AL+ L V+ L   +   + K +E + R   I P  A+ +  +++  +F      V Q  
Sbjct: 187 LALLVLLVIFLDCRQ---MSKVIEVVGRLRLILPTNAVVILKVSDLVYFRA----VAQGR 239

Query: 292 ETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQV 351
             A A     P+ S                       +  V+ +    E     Y  G++
Sbjct: 240 VKAFA-----PSISR---------------------LLTEVRGVANLEEAAIADYQEGRL 273

Query: 352 QLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQ 411
            + LG+F  A    +  L+  P+          + +  G+ ++++++L +     P   +
Sbjct: 274 NMALGNFSKARVLLDAALQTLPNLLAARIHYARLLLLSGKDKESEQMLLRINAEHPNQKE 333

Query: 412 AFIDLG 417
             + LG
Sbjct: 334 VLLMLG 339



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 155/741 (20%), Positives = 305/741 (41%), Gaps = 85/741 (11%)

Query: 203  IGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFE 262
            +GLC Y+L +L  A++  +RAL+++ ++  AL+ L V+ L   +   + K +E + R   
Sbjct: 402  MGLCAYRLNRLDYAQKMLERALEVNSDDELALLVLLVIFLDCRQ---MSKVIEVVGRLRL 458

Query: 263  IYPYCAMALNYLANHFFFTG------QHFL--VEQLTETALAVTNHGPTKSHSYYNLARS 314
            I P  A+ +  +++  +F        + F   + +L      V N        Y    R 
Sbjct: 459  ILPTNAVVILKVSDLVYFRAVAQGRVKAFAPSISRLLTEVRGVANLEEAAIADYQE-GRL 517

Query: 315  YHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPD 374
              + G++ KA +   A+++ +  P+  +       ++ L  G  + +     ++   +P+
Sbjct: 518  NMALGNFSKARVLLDAALQTL--PN-LLAARIHYARLLLLSGKDKESEQMLLRINAEHPN 574

Query: 375  NCETLKALGHIYVQLGQIEKAQELLRKAAK-IDPRDAQAFIDLGELLISSDTGAALDAFK 433
              E L  LG    +LG  E+A E  ++  + + P D +++  L       +   A     
Sbjct: 575  QKEVLLMLGAQAARLGLHERALECSKRLTEGVAPEDIRSW-SLASWCARLNKEEARKFSS 633

Query: 434  TARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVI 493
                + K+ G+  P ++L NI  ++             KD   DG+   +LD        
Sbjct: 634  LVARIQKEMGKTTPTQLLVNIATLN-------------KDV--DGLQ-RILDQ------- 670

Query: 494  DASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILF 553
            +  A +L    + + H               + ++FNLA LLE+  D V +  LY  ++ 
Sbjct: 671  ELGADVLSLPTLAVAH---------------IPIVFNLALLLEE-KDRVRSRQLYIFLVK 714

Query: 554  KYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAK 613
            K+  +   Y RL  +AK    L+ ++  +    ++    P +++ LG L  +   ++ + 
Sbjct: 715  KHGYFQLPYFRLHELAKTDGLLKQAVAWLVLLQQIVPDEPYSIASLGQLLFEQQRFMASL 774

Query: 614  ETFRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTS 673
               R+      G+     L LG     A LR  +   +     +  A++ ++ V+ +   
Sbjct: 775  SVLRS----VKGRPLPVVLGLGA----AYLRCGQHHWEDSRRFVSGARDRFSFVLRRDKG 826

Query: 674  NLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALA 733
            N+ AA+G    L  +GQ++  + L  +V E      +++      ++A+     G+F   
Sbjct: 827  NMLAAHGLACCLGLEGQYECCQSLLDRVGEVLPNCQYIRR-HYGAHMANAKILSGSF--- 882

Query: 734  MKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFD-AGV 792
             K  ++ L +    T  Q +  LA      E++ +    L  A+   P++  L ++ A V
Sbjct: 883  -KQARDYLERDKQRTPLQ-MSSLAFCLLSEERYSEAIAVLTEAMDACPNHSFLLYNLALV 940

Query: 793  AMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSH-LSAASNLHLHGFDEKKINTHVEY 851
                F AS   K   T DE RS    L   + + +  +    N       +  +     Y
Sbjct: 941  HCASFVASVSSKQALTIDEARSLRRSLATGLEIANRFIKINGNSQTLRVAQTFLRFVCIY 1000

Query: 852  CKHLLD-------AAKIHREAAEREEQQNRQRQEAARQAALAEEARRKAEEQKKYLLEKR 904
            C  L D       AA +  +AA   E+QN    E  R+   +    ++A ++++   E++
Sbjct: 1001 CVDLNDREIKKLIAAGL--QAAAEFEKQN----ELWRRVFGSYIEEKRAADERREADERK 1054

Query: 905  KLEDEQKRLRQQEEHFQRVKA 925
            + E EQ+  R+  E F R + 
Sbjct: 1055 RCEQEQQLAREILEGFNRARG 1075


>gi|15613825|ref|NP_242128.1| hypothetical protein BH1262 [Bacillus halodurans C-125]
 gi|10173878|dbj|BAB04981.1| BH1262 [Bacillus halodurans C-125]
          Length = 214

 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 40/134 (29%), Positives = 69/134 (51%), Gaps = 1/134 (0%)

Query: 106 KEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPAL 165
           +EE++  A + +N A   +  +P  +V  G LL   GE+++A   F   +    D  PA 
Sbjct: 2   REENYEEAAKAFNAAIEANPSDPIGFVNFGNLLGMVGELDKALIFFDKAIGLQEDCAPAY 61

Query: 166 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 225
            G   + + + ++ D  + +K+A+  H      +   +G+C Y+LG L  A+  FQRAL+
Sbjct: 62  YGAGTIYYKQEKFEDGAKMFKQAI-AHKLNETDVYFMLGMCYYQLGALPHAQANFQRALE 120

Query: 226 LDPENVEALVALAV 239
           LD  +VEA   L +
Sbjct: 121 LDSNDVEARFQLGL 134



 Score = 40.4 bits (93), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 44/176 (25%), Positives = 71/176 (40%), Gaps = 11/176 (6%)

Query: 302 PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSA 361
           P+    + N        G+ +KA +++    K I    +    YYG G +  K   F   
Sbjct: 21  PSDPIGFVNFGNLLGMVGELDKALIFF---DKAIGLQEDCAPAYYGAGTIYYKQEKFEDG 77

Query: 362 LTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLI 421
              F++ +    +  +    LG  Y QLG +  AQ   ++A ++D  D +A   LG  L 
Sbjct: 78  AKMFKQAIAHKLNETDVYFMLGMCYYQLGALPHAQANFQRALELDSNDVEARFQLGLCL- 136

Query: 422 SSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDAL 475
                A L+    A   L+   E VP   +   N+GV +  K   E A   F+ A+
Sbjct: 137 -----AQLEQVDEAIKHLQLVVEHVPNHADAHFNLGVAYAYKDRLEEALAHFERAI 187


>gi|212212959|ref|YP_002303895.1| tetratricopeptide repeat family protein [Coxiella burnetii
           CbuG_Q212]
 gi|212011369|gb|ACJ18750.1| tetratricopeptide repeat family protein [Coxiella burnetii
           CbuG_Q212]
          Length = 561

 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 81/318 (25%), Positives = 141/318 (44%), Gaps = 29/318 (9%)

Query: 165 LLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRAL 224
           LL +A  +  +G   ++LE Y + L+  P    A+  G G+   +LG+  +A     RAL
Sbjct: 5   LLERAIQQHQQGSLKNALENYHKVLEDDPKQTAALH-GAGIALSQLGRNDEALHYIDRAL 63

Query: 225 QLDPENVEALVALAVMDLQANEAAGIRKGMEKM---QRAFEIYPYCAMALNYLANHFFFT 281
            L+P+N          + + N  +   K +E      +A ++ P  A A N +AN FF  
Sbjct: 64  LLEPQNA------TFQNSRGNILSQHGKLVEATIAYDQAIQLQPDHATAYNNIANCFFRQ 117

Query: 282 GQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKE---INKP 338
            +    ++  + A+A+    P  +++++N AR      +Y +A    +A +K    ++  
Sbjct: 118 KKFDNAKKAYQKAIALK---PHFANAHFNYARLLIELENYHQA----IAELKRTVAMSSH 170

Query: 339 HEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQEL 398
           H   F    L  V + LGDF  A+T +EK L + P+N +     G  +++  Q +KA + 
Sbjct: 171 HSAAFS--QLAHVYMYLGDFSKAITYYEKRLALEPENADAQYDCGLAHLKDNQFQKAIDY 228

Query: 399 LRKAAKIDPRDAQAFIDLGE-LLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVI 457
              A  ++P        L    L   D   AL  +      L++  ++  IE   N+GV+
Sbjct: 229 FTNALLLNPEHPDCHYSLATAYLQRGDHKEALLHY------LRQLEKKPQIECYYNVGVL 282

Query: 458 HFEKGEFESAHQSFKDAL 475
           H  +     A   FK AL
Sbjct: 283 HMYQERHREAIDYFKQAL 300



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 75/301 (24%), Positives = 128/301 (42%), Gaps = 16/301 (5%)

Query: 141 KGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIR 200
           +G ++ A   +  VLE D     AL G        GR  ++L +  RAL + P      +
Sbjct: 15  QGSLKNALENYHKVLEDDPKQTAALHGAGIALSQLGRNDEALHYIDRALLLEPQ-NATFQ 73

Query: 201 LGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRA 260
              G    + G+L +A  A+ +A+QL P++  A   +A    +  +    +K     Q+A
Sbjct: 74  NSRGNILSQHGKLVEATIAYDQAIQLQPDHATAYNNIANCFFRQKKFDNAKKA---YQKA 130

Query: 261 FEIYPYCAMA-LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 319
             + P+ A A  NY          H  + +L  T    ++H    S ++  LA  Y   G
Sbjct: 131 IALKPHFANAHFNYARLLIELENYHQAIAELKRTVAMSSHH----SAAFSQLAHVYMYLG 186

Query: 320 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 379
           D+ KA  YY    K +    E     Y  G   LK   F+ A+  F   L + P++ +  
Sbjct: 187 DFSKAITYYE---KRLALEPENADAQYDCGLAHLKDNQFQKAIDYFTNALLLNPEHPDCH 243

Query: 380 KALGHIYVQLGQIEKAQELLRKAAKIDPR-DAQAFIDLGELLISSDTG-AALDAFKTART 437
            +L   Y+Q G  ++A  LL    +++ +   + + ++G L +  +    A+D FK A  
Sbjct: 244 YSLATAYLQRGDHKEA--LLHYLRQLEKKPQIECYYNVGVLHMYQERHREAIDYFKQALI 301

Query: 438 L 438
           L
Sbjct: 302 L 302



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 66/330 (20%), Positives = 134/330 (40%), Gaps = 39/330 (11%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
           A + Y+K    D  + +   G G  L   G  ++A       L  +  N      +  + 
Sbjct: 21  ALENYHKVLEDDPKQTAALHGAGIALSQLGRNDEALHYIDRALLLEPQNATFQNSRGNIL 80

Query: 173 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 232
              G+  ++   Y +A+Q+ P    A    I  C ++  +   A++A+Q+A+ L P    
Sbjct: 81  SQHGKLVEATIAYDQAIQLQPDHATAYN-NIANCFFRQKKFDNAKKAYQKAIALKPHFAN 139

Query: 233 ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQ--------- 283
           A    A + +   E     + + +++R   +  + + A + LA+ + + G          
Sbjct: 140 AHFNYARLLI---ELENYHQAIAELKRTVAMSSHHSAAFSQLAHVYMYLGDFSKAITYYE 196

Query: 284 -------------------HFLVEQLTETALAVTNH---GPTKSHSYYNLARSYHSKGDY 321
                              H    Q  +     TN     P     +Y+LA +Y  +GD+
Sbjct: 197 KRLALEPENADAQYDCGLAHLKDNQFQKAIDYFTNALLLNPEHPDCHYSLATAYLQRGDH 256

Query: 322 EKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKA 381
           ++A L+Y+  +++  KP   I  YY +G + +     R A+  F++ L + P+  E    
Sbjct: 257 KEALLHYLRQLEK--KPQ--IECYYNVGVLHMYQERHREAIDYFKQALILDPNYREAHLN 312

Query: 382 LGHIYVQLGQIEKAQELLRKAAKIDPRDAQ 411
           +  +Y+++ QI++A E       + P D++
Sbjct: 313 IAAVYLKINQIKQAIEHYESTLVLKPNDSE 342


>gi|88604422|ref|YP_504600.1| hypothetical protein Mhun_3199 [Methanospirillum hungatei JF-1]
 gi|88189884|gb|ABD42881.1| TPR repeat [Methanospirillum hungatei JF-1]
          Length = 565

 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 79/318 (24%), Positives = 134/318 (42%), Gaps = 47/318 (14%)

Query: 127 EPS-TW--VGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLE 183
           EP+ TW    KG+LL  +G+  +A + F      D+ N PA           G Y+ +++
Sbjct: 150 EPNNTWSAFNKGRLLFEEGKHREALAWFIKATTYDQKNAPAWYFTGTTYTELGNYAQAID 209

Query: 184 FYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEA-LVALAVMDL 242
             + AL + PS  GA    +G    KLG    AR  ++ A++L+P+NV    V    + +
Sbjct: 210 ALQSALTLDPSNAGAY-YEMGRAYEKLGNRTAARNYYETAIKLNPDNVWTRFVYGKNLAI 268

Query: 243 QANEAAGIRKGMEKMQRAFEIYPYCAMALNY-LANHFFFTGQHFLVEQLTETALAVTNH- 300
             +  + I++    ++ +      C  +  Y LAN ++ TGQ+    +   +AL +  + 
Sbjct: 269 SGDYESAIKELKTSLKGSS-----CQASAWYELANAYYQTGQYDQALEAINSALTIDPYT 323

Query: 301 ------------------------------GP-TKSHSYYNLARSYHSKGDYEKAGLYYM 329
                                          P   S  +Y  A +YH  G Y  A L Y+
Sbjct: 324 KEYRALYLSIRAAQDPASWSLQNVTKRAVDAPENASVWFYQGAIAYHD-GRYADA-LTYL 381

Query: 330 ASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQL 389
            S   ++  +   + Y G+   Q +LG ++ AL +F+K + + P N       G I  + 
Sbjct: 382 TSAVSLDPMNPEAWYYRGV--TQYELGRYQDALCSFDKTILLDPGNAWAYYYRGDILQKG 439

Query: 390 GQIEKAQELLRKAAKIDP 407
           GQ E A   L K  ++DP
Sbjct: 440 GQCEYAIAYLNKGIQLDP 457


>gi|328950837|ref|YP_004368172.1| hypothetical protein Marky_1325 [Marinithermus hydrothermalis DSM
           14884]
 gi|328451161|gb|AEB12062.1| Tetratricopeptide TPR_2 repeat-containing protein [Marinithermus
           hydrothermalis DSM 14884]
          Length = 362

 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 76/298 (25%), Positives = 124/298 (41%), Gaps = 27/298 (9%)

Query: 190 QVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAG 249
           +  PS    + LG     Y  GQ   A  AF+RA++LD +NVEAL  LA   L+      
Sbjct: 29  RTQPSVQNYVLLGNQY--YDAGQYDAALIAFKRAVELDEKNVEALYGLARAQLRLRL--- 83

Query: 250 IRKGMEKMQRAFEI-----YPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTK 304
               +E ++ A  +       Y A+A  Y  + +           L + AL V N     
Sbjct: 84  FSSAVENLKAAISLDASYTPAYVALAQAY-TDQYINARDREAARALLDQALLVLNDAERI 142

Query: 305 SHSYYNLARS----YHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRS 360
           +  YY +       Y  KGD EKA   +  ++  IN     +   Y L    L LG    
Sbjct: 143 NPEYYAIYNQRGLIYQYKGDPEKAAEAFEKALS-INNEDPIVL--YNLALTNLSLGRLDE 199

Query: 361 ALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 420
           AL+  ++ + + P +       G +    G+++ A   L +A ++DP +A A+  LG++ 
Sbjct: 200 ALSLLKRAVAVAPQDSYVRARYGALLAVKGRLDDALFELEQAVRLDPTNALAWSYLGQVR 259

Query: 421 ISSDTGAALDAFKTARTLLKKAGEEVP---IEVLNNIGVIHFEKGEFESAHQSFKDAL 475
                      ++ A   L +A E  P    E    +G ++ E+GE+E A  +   A+
Sbjct: 260 FQRKE------YEEALAALSRAVERDPSRYPEAYFYLGRVYMERGEYEEARYNLSKAV 311



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 66/268 (24%), Positives = 107/268 (39%), Gaps = 43/268 (16%)

Query: 118 NKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGR 177
           N A RI+    + +  +G +   KG+ E+A+ AF+  L  + ++   L   A    + GR
Sbjct: 137 NDAERINPEYYAIYNQRGLIYQYKGDPEKAAEAFEKALSINNEDPIVLYNLALTNLSLGR 196

Query: 178 YSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVAL 237
             ++L   KRA+ V P     +R   G      G+L  A    ++A++LDP N       
Sbjct: 197 LDEALSLLKRAVAVAPQD-SYVRARYGALLAVKGRLDDALFELEQAVRLDPTN------- 248

Query: 238 AVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAV 297
                                         A+A +YL    F   ++   E L   + AV
Sbjct: 249 ------------------------------ALAWSYLGQVRFQRKEY--EEALAALSRAV 276

Query: 298 TNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGD 357
                    +Y+ L R Y  +G+YE+A   Y  S   +  P    + Y+ LG    KLGD
Sbjct: 277 ERDPSRYPEAYFYLGRVYMERGEYEEAR--YNLSKAVVLDPANAEYRYW-LGHANEKLGD 333

Query: 358 FRSALTNFEKVLEIYPDNCETLKALGHI 385
              A   ++K +E+ PD  E  + L  +
Sbjct: 334 MEGAAAQYKKAIELRPDYPEAREGLARV 361



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 84/369 (22%), Positives = 140/369 (37%), Gaps = 76/369 (20%)

Query: 83  IAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKG 142
           +A+L AL V  T     E  Q   + + +L  QYY+                       G
Sbjct: 13  LAVLPALAVAQT--DSEERTQPSVQNYVLLGNQYYDA----------------------G 48

Query: 143 EVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS-CPGAIRL 201
           + + A  AFK  +E D  NV AL G A  +     +S ++E  K A+ +  S  P  + L
Sbjct: 49  QYDAALIAFKRAVELDEKNVEALYGLARAQLRLRLFSSAVENLKAAISLDASYTPAYVAL 108

Query: 202 G-------------------------------------------IGLCRYKLGQLGKARQ 218
                                                        GL     G   KA +
Sbjct: 109 AQAYTDQYINARDREAARALLDQALLVLNDAERINPEYYAIYNQRGLIYQYKGDPEKAAE 168

Query: 219 AFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHF 278
           AF++AL ++ E+   L  LA+ +L       + + +  ++RA  + P  +          
Sbjct: 169 AFEKALSINNEDPIVLYNLALTNLSLGR---LDEALSLLKRAVAVAPQDSYVRARYGALL 225

Query: 279 FFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKP 338
              G+  L + L E   AV    PT + ++  L +    + +YE+A      +V+    P
Sbjct: 226 AVKGR--LDDALFELEQAV-RLDPTNALAWSYLGQVRFQRKEYEEALAALSRAVE--RDP 280

Query: 339 HEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQEL 398
             +   Y+ LG+V ++ G++  A  N  K + + P N E    LGH   +LG +E A   
Sbjct: 281 SRYPEAYFYLGRVYMERGEYEEARYNLSKAVVLDPANAEYRYWLGHANEKLGDMEGAAAQ 340

Query: 399 LRKAAKIDP 407
            +KA ++ P
Sbjct: 341 YKKAIELRP 349


>gi|326435668|gb|EGD81238.1| tetratricopeptide protein [Salpingoeca sp. ATCC 50818]
          Length = 863

 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 91/379 (24%), Positives = 152/379 (40%), Gaps = 102/379 (26%)

Query: 135 GQLLLAKGEVEQASSAFK----IVLEADRDNVPAL------LGQACVEFNRGRYSDSLEF 184
           G    +KGE ++A + ++    I +E   +  P+       LG A   +++G +  ++ +
Sbjct: 320 GNAYCSKGEYDRAIAFYEKDLAITVETLGEKHPSTASTYNNLGTA--YYSKGDFDKAIHY 377

Query: 185 YKRALQV--------HPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVA 236
           YK+AL +        HPS   +  +G+G+   K G+L +A   +++AL +    VEAL  
Sbjct: 378 YKKALAITVETLGEKHPSTADSC-VGLGIAYEKKGELDRAIAFYEQALAI---MVEAL-- 431

Query: 237 LAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALA 296
                                    E +P  A   N + + ++  G +    +  + ALA
Sbjct: 432 ------------------------GEKHPNTADTYNNIGSVYYSKGDYDRAIECFDKALA 467

Query: 297 V-----TNHGPTKSHSYYNLARSYHSKGDYEKA-GLYYMA---SVKEINKPHEFI-FPYY 346
           V         P+ + +Y NL  +YH KGDY+KA  LY  A   +V+ + + H      Y 
Sbjct: 468 VRVETLGEKHPSTAQTYNNLGGAYHDKGDYDKAIALYEKALAITVEALGEKHPSTATSYN 527

Query: 347 GLGQVQLKLGDFRSALTNFEKVLEIY--------PDNCETLKALGHIYVQLGQIEKAQEL 398
            LG    + G++  A+  +EK L IY        P   +T   LG  YV  GQ  KA   
Sbjct: 528 NLGGAYARKGEYDKAIACYEKALAIYAETLGEKHPSTADTYNNLGAAYVDKGQYGKAIHH 587

Query: 399 LRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLN--NIGV 456
             +A  I                                 ++  GE+ P   +   NIG+
Sbjct: 588 YEQALAIK--------------------------------VETLGEKHPSTAMTYFNIGL 615

Query: 457 IHFEKGEFESAHQSFKDAL 475
           +H  +G+ E A    + AL
Sbjct: 616 LHDTRGDKEQACAYVQQAL 634



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 63/238 (26%), Positives = 106/238 (44%), Gaps = 30/238 (12%)

Query: 268 AMALNYLANHFFFTGQHFLVEQLTETALAVT-----NHGPTKSHSYYNLARSYHSKGDYE 322
           A++ N L N +   G++       E  LA+T        P+ + +Y NL  +Y+SKGD++
Sbjct: 313 AVSNNNLGNAYCSKGEYDRAIAFYEKDLAITVETLGEKHPSTASTYNNLGTAYYSKGDFD 372

Query: 323 KAGLYY----MASVKEINKPHEFIF-PYYGLGQVQLKLGDFRSALTNFEKVLEI------ 371
           KA  YY      +V+ + + H        GLG    K G+   A+  +E+ L I      
Sbjct: 373 KAIHYYKKALAITVETLGEKHPSTADSCVGLGIAYEKKGELDRAIAFYEQALAIMVEALG 432

Query: 372 --YPDNCETLKALGHIYVQLGQIEKAQELLRKAAKI--------DPRDAQAFIDLGELL- 420
             +P+  +T   +G +Y   G  ++A E   KA  +         P  AQ + +LG    
Sbjct: 433 EKHPNTADTYNNIGSVYYSKGDYDRAIECFDKALAVRVETLGEKHPSTAQTYNNLGGAYH 492

Query: 421 ISSDTGAALDAFKTARTLLKKA-GEEVPIEVL--NNIGVIHFEKGEFESAHQSFKDAL 475
              D   A+  ++ A  +  +A GE+ P      NN+G  +  KGE++ A   ++ AL
Sbjct: 493 DKGDYDKAIALYEKALAITVEALGEKHPSTATSYNNLGGAYARKGEYDKAIACYEKAL 550



 Score = 56.6 bits (135), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 58/224 (25%), Positives = 100/224 (44%), Gaps = 30/224 (13%)

Query: 282 GQHFLVEQLTETALAV-----TNHGPTKSHSYYNLARSYHSKGDYEKAGLYY----MASV 332
           G+H       ETALAV        G   + S  NL  +Y SKG+Y++A  +Y      +V
Sbjct: 285 GEHDKAIAYYETALAVYLRTEKEKGENVAVSNNNLGNAYCSKGEYDRAIAFYEKDLAITV 344

Query: 333 KEINKPHEFIFPYY-GLGQVQLKLGDFRSALTNFEKVLEI--------YPDNCETLKALG 383
           + + + H      Y  LG      GDF  A+  ++K L I        +P   ++   LG
Sbjct: 345 ETLGEKHPSTASTYNNLGTAYYSKGDFDKAIHYYKKALAITVETLGEKHPSTADSCVGLG 404

Query: 384 HIYVQLGQIEKAQELLRKAAKI--------DPRDAQAFIDLGELLIS-SDTGAALDAFKT 434
             Y + G++++A     +A  I         P  A  + ++G +  S  D   A++ F  
Sbjct: 405 IAYEKKGELDRAIAFYEQALAIMVEALGEKHPNTADTYNNIGSVYYSKGDYDRAIECFDK 464

Query: 435 ARTL-LKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDAL 475
           A  + ++  GE+ P   +  NN+G  + +KG+++ A   ++ AL
Sbjct: 465 ALAVRVETLGEKHPSTAQTYNNLGGAYHDKGDYDKAIALYEKAL 508



 Score = 45.4 bits (106), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 76/311 (24%), Positives = 120/311 (38%), Gaps = 69/311 (22%)

Query: 110 FILATQYYNKASRIDMH-----EPST---WVGKGQLLLAKGEVEQA----SSAFKIVLEA 157
           F  A  YY KA  I +       PST    VG G     KGE+++A      A  I++EA
Sbjct: 371 FDKAIHYYKKALAITVETLGEKHPSTADSCVGLGIAYEKKGELDRAIAFYEQALAIMVEA 430

Query: 158 DRDNVPALLGQ----ACVEFNRGRYSDSLEFYKRALQV--------HPSCPGAIRLGIGL 205
             +  P           V +++G Y  ++E + +AL V        HPS        +G 
Sbjct: 431 LGEKHPNTADTYNNIGSVYYSKGDYDRAIECFDKALAVRVETLGEKHPSTAQTYN-NLGG 489

Query: 206 CRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYP 265
             +  G   KA   +++AL +    VEAL                           E +P
Sbjct: 490 AYHDKGDYDKAIALYEKALAI---TVEAL--------------------------GEKHP 520

Query: 266 YCAMALNYLANHFFFTGQHFLVEQLTETALAV-----TNHGPTKSHSYYNLARSYHSKGD 320
             A + N L   +   G++       E ALA+         P+ + +Y NL  +Y  KG 
Sbjct: 521 STATSYNNLGGAYARKGEYDKAIACYEKALAIYAETLGEKHPSTADTYNNLGAAYVDKGQ 580

Query: 321 YEKAGLYYMAS----VKEINKPHEFI-FPYYGLGQVQLKLGDFRSALTNFEKVLEIY--- 372
           Y KA  +Y  +    V+ + + H      Y+ +G +    GD   A    ++ L+++   
Sbjct: 581 YGKAIHHYEQALAIKVETLGEKHPSTAMTYFNIGLLHDTRGDKEQACAYVQQALDVFATT 640

Query: 373 --PDNCETLKA 381
             PD+  T KA
Sbjct: 641 LGPDHPNTRKA 651


>gi|15678111|ref|NP_275226.1| O-linked GlcNAc transferase [Methanothermobacter thermautotrophicus
           str. Delta H]
 gi|2621120|gb|AAB84589.1| O-linked GlcNAc transferase [Methanothermobacter thermautotrophicus
           str. Delta H]
          Length = 379

 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 91/375 (24%), Positives = 165/375 (44%), Gaps = 44/375 (11%)

Query: 47  AREYFKQGK----VEQFRQILE-EGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIET 101
            R   KQGK    +++FR+ L+   ++PEI                   ++Y  +  ++ 
Sbjct: 23  GRSSLKQGKYKEALKEFRKALKARPNNPEI-------------------LHYNAITLLKL 63

Query: 102 KQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDN 161
           K+ EK      A + Y K  + +      W  KG +L   G  ++A   ++  L+ +   
Sbjct: 64  KRPEK------ALECYEKILKNNPKLAEAWNNKGLVLKELGRYDEALECYEKALKINPKY 117

Query: 162 VPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQ 221
             A   +A V    GRY ++LE Y++ALQ++P    A     G     L +  KA + F+
Sbjct: 118 AGAWNNKALVLKELGRYDEALECYEKALQINPKLADAW-YNKGSVLIYLKKYKKALKCFE 176

Query: 222 RALQLDPENVEAL--VALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFF 279
           +A++L+P+N  A     + + +L+  E A     ++   +  ++ P    A N     F 
Sbjct: 177 KAIELNPKNYRAWGTKGITLHNLKIYEEA-----LKCYDKVLQLNPQDDKAWNNKGLVFN 231

Query: 280 FTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPH 339
             G++    +  E AL +    P  + ++ N        G YE+A   Y  ++ EI+   
Sbjct: 232 ELGRYDESLECYEKALQIN---PKLAEAWNNKGVVLSELGRYEEALECYEKAL-EIDPED 287

Query: 340 EFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELL 399
           +  +   GL  V  +LG ++ AL  F+K LEI P+  +  K  G I   L + E++ +  
Sbjct: 288 DKTWNNKGL--VLEELGKYKDALECFQKALEINPEFADAWKWKGIILEDLKKPEESLKCY 345

Query: 400 RKAAKIDPRDAQAFI 414
           +KA K++P      +
Sbjct: 346 KKALKLNPPKQNTMV 360



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 79/307 (25%), Positives = 140/307 (45%), Gaps = 20/307 (6%)

Query: 138 LLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPG 197
           LL     E+A   ++ +L+ +     A   +  V    GRY ++LE Y++AL+++P   G
Sbjct: 60  LLKLKRPEKALECYEKILKNNPKLAEAWNNKGLVLKELGRYDEALECYEKALKINPKYAG 119

Query: 198 AIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKM 257
           A      L   +LG+  +A + +++ALQ++P+  +A      + +   +     K  EK 
Sbjct: 120 AWN-NKALVLKELGRYDEALECYEKALQINPKLADAWYNKGSVLIYLKKYKKALKCFEK- 177

Query: 258 QRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALA----VTNHGPTKSHSYYNLAR 313
             A E+ P      NY A        H L  ++ E AL     V    P    ++ N   
Sbjct: 178 --AIELNPK-----NYRAWGTKGITLHNL--KIYEEALKCYDKVLQLNPQDDKAWNNKGL 228

Query: 314 SYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYP 373
            ++  G Y+++   Y  ++ +IN   +    +   G V  +LG +  AL  +EK LEI P
Sbjct: 229 VFNELGRYDESLECYEKAL-QIN--PKLAEAWNNKGVVLSELGRYEEALECYEKALEIDP 285

Query: 374 DNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFK 433
           ++ +T    G +  +LG+ + A E  +KA +I+P  A A+   G  +I  D     ++ K
Sbjct: 286 EDDKTWNNKGLVLEELGKYKDALECFQKALEINPEFADAWKWKG--IILEDLKKPEESLK 343

Query: 434 TARTLLK 440
             +  LK
Sbjct: 344 CYKKALK 350



 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 75/304 (24%), Positives = 139/304 (45%), Gaps = 15/304 (4%)

Query: 135 GQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS 194
           G+  L +G+ ++A   F+  L+A  +N   L   A       R   +LE Y++ L+ +P 
Sbjct: 23  GRSSLKQGKYKEALKEFRKALKARPNNPEILHYNAITLLKLKRPEKALECYEKILKNNPK 82

Query: 195 CPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGM 254
              A     GL   +LG+  +A + +++AL+++P+   A    A++     E     + +
Sbjct: 83  LAEAWN-NKGLVLKELGRYDEALECYEKALKINPKYAGAWNNKALV---LKELGRYDEAL 138

Query: 255 EKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARS 314
           E  ++A +I P  A A     +   +  ++    +  E A+ +    P    ++     +
Sbjct: 139 ECYEKALQINPKLADAWYNKGSVLIYLKKYKKALKCFEKAIELN---PKNYRAWGTKGIT 195

Query: 315 YHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPD 374
            H+   YE+A L     V ++N   +  +   GL  V  +LG +  +L  +EK L+I P 
Sbjct: 196 LHNLKIYEEA-LKCYDKVLQLNPQDDKAWNNKGL--VFNELGRYDESLECYEKALQINPK 252

Query: 375 NCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGA---ALDA 431
             E     G +  +LG+ E+A E   KA +IDP D + + + G  L+  + G    AL+ 
Sbjct: 253 LAEAWNNKGVVLSELGRYEEALECYEKALEIDPEDDKTWNNKG--LVLEELGKYKDALEC 310

Query: 432 FKTA 435
           F+ A
Sbjct: 311 FQKA 314


>gi|367471923|ref|ZP_09471520.1| putative TPR repeat protein [Bradyrhizobium sp. ORS 285]
 gi|365275762|emb|CCD83988.1| putative TPR repeat protein [Bradyrhizobium sp. ORS 285]
          Length = 1410

 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 65/282 (23%), Positives = 128/282 (45%), Gaps = 10/282 (3%)

Query: 138  LLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPG 197
            L ++GE+  A   FK++L     N  AL+G   +     R  ++ +++ RA+ V+ +   
Sbjct: 792  LQSRGEISDAEQIFKLILAGQPTNFEALVGLGMISTTYSRLEEAKDYFVRAVAVNANSAE 851

Query: 198  AIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKM 257
            A    IG      G+  +A + ++ AL L P +   L   A+  ++ N+   I + M  +
Sbjct: 852  A-HGSIGAVEGSAGRYDEAVRHYETALTLSPSHPGILYGFAM--VRQNQGL-IDEAMALL 907

Query: 258  QRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHS 317
            +RA +  P    A   L N  + +G+     +     L V +  P  + ++ N+A     
Sbjct: 908  RRAIDNKPQHLDAHFALGNLLYTSGKDI---EAARHYLKVLDFSPEHAETHNNIANVLLR 964

Query: 318  KGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCE 377
            +G  E+A  +Y  ++   ++P ++   Y  LG   L+L     ++      ++I P+   
Sbjct: 965  QGHRERAIEHYQRAIA--SRP-DYADAYGNLGNAFLELNRLEESIEQNLLAIKIKPERFG 1021

Query: 378  TLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGEL 419
            +   LG  Y  LG+ ++A    +KA ++ P DA   ++L  +
Sbjct: 1022 SYNNLGVAYQALGRFDEATAAFQKALELAPDDAPIHLNLANM 1063



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 65/263 (24%), Positives = 110/263 (41%), Gaps = 17/263 (6%)

Query: 132  VGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQV 191
            VG G +      +E+A   F   +  + ++  A      VE + GRY +++  Y+ AL +
Sbjct: 820  VGLGMISTTYSRLEEAKDYFVRAVAVNANSAEAHGSIGAVEGSAGRYDEAVRHYETALTL 879

Query: 192  HPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIR 251
             PS PG I  G  + R   G + +A    +RA+   P++++A  AL   +L       I 
Sbjct: 880  SPSHPG-ILYGFAMVRQNQGLIDEAMALLRRAIDNKPQHLDAHFALG--NLLYTSGKDIE 936

Query: 252  KGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNL 311
                 + +  +  P  A   N +AN     G      +  + A+A     P  + +Y NL
Sbjct: 937  AARHYL-KVLDFSPEHAETHNNIANVLLRQGHRERAIEHYQRAIASR---PDYADAYGNL 992

Query: 312  ARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEI 371
              ++      E++    + ++K   KP  F   Y  LG     LG F  A   F+K LE+
Sbjct: 993  GNAFLELNRLEESIEQNLLAIK--IKPERF-GSYNNLGVAYQALGRFDEATAAFQKALEL 1049

Query: 372  YPDNCETLKALGHIYVQLGQIEK 394
             PD+         I++ L  + K
Sbjct: 1050 APDDAP-------IHLNLANMSK 1065



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 57/252 (22%), Positives = 103/252 (40%), Gaps = 46/252 (18%)

Query: 166 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 225
           LG  C +   GR+S+++  Y RAL + P+ P  + L +G C   +G+L  A +  Q+AL 
Sbjct: 192 LGDVCRQL--GRHSEAIAHYTRALAIEPNMP-MVLLNLGGCHQAIGELDAAIRNLQKALA 248

Query: 226 LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 285
           L P+  EA   L  + L      G    +   +RA  + P    A N  AN    +G+H 
Sbjct: 249 LSPQLAEAHYNLGNIHLDMKSWPG---ALFHYERAVALRPDFPEAHNNFANALESSGRHD 305

Query: 286 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 345
                 + AL +    P  + ++ N A S  +   Y++A                     
Sbjct: 306 EALSHYDEALRLR---PDYAVAHRNRADSLRNAQRYDEA--------------------- 341

Query: 346 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKI 405
                    +  +++AL +  +       +  T+  L  +   +G+I++A+     A  +
Sbjct: 342 ---------IAGYQTALAHDAR-------DTTTMNHLAGVLTIVGRIDEAERAYESALAV 385

Query: 406 DPRDAQAFIDLG 417
           +PR     ++LG
Sbjct: 386 NPRSIGTHLNLG 397



 Score = 48.1 bits (113), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 64/269 (23%), Positives = 118/269 (43%), Gaps = 21/269 (7%)

Query: 211  GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 270
            G++  A Q F+  L   P N EALV L ++    +    + +  +   RA  +    A A
Sbjct: 796  GEISDAEQIFKLILAGQPTNFEALVGLGMISTTYSR---LEEAKDYFVRAVAVNANSAEA 852

Query: 271  LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 330
               +       G++    +  ETAL ++   P+     Y  A    ++G  ++A    MA
Sbjct: 853  HGSIGAVEGSAGRYDEAVRHYETALTLS---PSHPGILYGFAMVRQNQGLIDEA----MA 905

Query: 331  SVKEI--NKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQ 388
             ++    NKP + +  ++ LG +    G    A  ++ KVL+  P++ ET   + ++ ++
Sbjct: 906  LLRRAIDNKP-QHLDAHFALGNLLYTSGKDIEAARHYLKVLDFSPEHAETHNNIANVLLR 964

Query: 389  LGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTA--RTLLKKAGEEV 446
             G  E+A E  ++A    P  A A+ +LG   +       L+  + +  + LL    +  
Sbjct: 965  QGHRERAIEHYQRAIASRPDYADAYGNLGNAFLE------LNRLEESIEQNLLAIKIKPE 1018

Query: 447  PIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
                 NN+GV +   G F+ A  +F+ AL
Sbjct: 1019 RFGSYNNLGVAYQALGRFDEATAAFQKAL 1047



 Score = 43.9 bits (102), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 54/229 (23%), Positives = 93/229 (40%), Gaps = 11/229 (4%)

Query: 96   LGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVL 155
            LG I T     EE    A  Y+ +A  ++ +        G +  + G  ++A   ++  L
Sbjct: 822  LGMISTTYSRLEE----AKDYFVRAVAVNANSAEAHGSIGAVEGSAGRYDEAVRHYETAL 877

Query: 156  EADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGK 215
                 +   L G A V  N+G   +++   +RA+   P    A    +G   Y  G+  +
Sbjct: 878  TLSPSHPGILYGFAMVRQNQGLIDEAMALLRRAIDNKPQHLDA-HFALGNLLYTSGKDIE 936

Query: 216  ARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLA 275
            A + + + L   PE+ E    +A + L+        + +E  QRA    P  A A   L 
Sbjct: 937  AARHYLKVLDFSPEHAETHNNIANVLLRQGHR---ERAIEHYQRAIASRPDYADAYGNLG 993

Query: 276  NHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 324
            N F    +   +E+  E  L      P +  SY NL  +Y + G +++A
Sbjct: 994  NAFLELNR---LEESIEQNLLAIKIKPERFGSYNNLGVAYQALGRFDEA 1039


>gi|452821043|gb|EME28078.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
           SPINDLY-lie protein [Galdieria sulphuraria]
          Length = 1154

 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 70/302 (23%), Positives = 126/302 (41%), Gaps = 45/302 (14%)

Query: 176 GRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV 235
           G   +++ +Y+ AL V+P+   A    +G+    LG+   A + +  A+Q +P + EA  
Sbjct: 449 GLSKEAISYYQEALSVYPTFSQAC-YNLGVTFADLGKTDDALRYYTEAVQCNPHHAEAYC 507

Query: 236 ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETAL 295
              V+     E   +   +EK +++ E  P   +A N LA                    
Sbjct: 508 NAGVI---YKEKGDLMTAIEKYKQSLESNPNFDLARNNLA-------------------- 544

Query: 296 AVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFP--YYGLGQVQL 353
                      +Y +L   + +KGD  K+  YY  S+  +N      +P  +Y LG    
Sbjct: 545 ----------IAYSDLGTVWKTKGDLSKSVYYYKKSLS-LNP----CYPDAHYNLGVAYS 589

Query: 354 KLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAF 413
           +   F  A+T++E  +   P + E+L  LG +Y ++G +E+A    + A  I+P   Q F
Sbjct: 590 EARKFDRAVTHYELAIRFNPSHTESLNNLGVLYKEMGNLERAIASYKAALNINP---QYF 646

Query: 414 IDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKD 473
                L +      A D  K   ++          E  NN+GV+  ++G+   A + ++ 
Sbjct: 647 QTHNNLAVVYTIMGACDLAKEHLSMAIALNSSY-AEAHNNLGVLLRDEGDIHGAIEHYEQ 705

Query: 474 AL 475
            L
Sbjct: 706 CL 707



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 58/247 (23%), Positives = 107/247 (43%), Gaps = 25/247 (10%)

Query: 89  LGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQAS 148
           LGV +  LGK +            A +YY +A + + H    +   G +   KG++  A 
Sbjct: 475 LGVTFADLGKTDD-----------ALRYYTEAVQCNPHHAEAYCNAGVIYKEKGDLMTAI 523

Query: 149 SAFKIVLEAD------RDNVP-ALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 201
             +K  LE++      R+N+  A      V   +G  S S+ +YK++L ++P  P A   
Sbjct: 524 EKYKQSLESNPNFDLARNNLAIAYSDLGTVWKTKGDLSKSVYYYKKSLSLNPCYPDA-HY 582

Query: 202 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 261
            +G+   +  +  +A   ++ A++ +P + E+L  L V+     E   + + +   + A 
Sbjct: 583 NLGVAYSEARKFDRAVTHYELAIRFNPSHTESLNNLGVL---YKEMGNLERAIASYKAAL 639

Query: 262 EIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDY 321
            I P      N LA  +   G   L ++    A+A+ N    ++H+  NL      +GD 
Sbjct: 640 NINPQYFQTHNNLAVVYTIMGACDLAKEHLSMAIAL-NSSYAEAHN--NLGVLLRDEGDI 696

Query: 322 EKAGLYY 328
             A  +Y
Sbjct: 697 HGAIEHY 703


>gi|29653887|ref|NP_819579.1| hypothetical protein CBU_0547 [Coxiella burnetii RSA 493]
 gi|161831595|ref|YP_001596478.1| TPR repeat-containing methyltransferase [Coxiella burnetii RSA 331]
 gi|29541150|gb|AAO90093.1| tetratricopeptide repeat family protein [Coxiella burnetii RSA 493]
 gi|161763462|gb|ABX79104.1| tetratricopeptide repeat protein/methyltransferase [Coxiella
           burnetii RSA 331]
          Length = 561

 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 81/318 (25%), Positives = 141/318 (44%), Gaps = 29/318 (9%)

Query: 165 LLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRAL 224
           LL +A  +  +G   ++LE Y + L+  P    A+  G G+   +LG+  +A     RAL
Sbjct: 5   LLERAIQQHQQGSLKNALENYHKVLEDDPKQTAALH-GAGIALSQLGRNDEALHYIDRAL 63

Query: 225 QLDPENVEALVALAVMDLQANEAAGIRKGMEKM---QRAFEIYPYCAMALNYLANHFFFT 281
            L+P+N          + + N  +   K +E      +A ++ P  A A N +AN FF  
Sbjct: 64  LLEPQNA------TFQNSRGNILSQHGKLVEATIAYDQAIQLQPDHATAYNNIANCFFRQ 117

Query: 282 GQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKE---INKP 338
            +    ++  + A+A+    P  +++++N AR      +Y +A    +A +K    ++  
Sbjct: 118 KKFDNAKKAYQKAIALK---PHFANAHFNYARLLIELENYHQA----IAELKRTVAMSSH 170

Query: 339 HEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQEL 398
           H   F    L  V + LGDF  A+T +EK L + P+N +     G  +++  Q +KA + 
Sbjct: 171 HSAAFS--QLAHVYMYLGDFSKAITYYEKRLALEPENADAQYDCGLAHLKDNQFQKAIDY 228

Query: 399 LRKAAKIDPRDAQAFIDLGE-LLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVI 457
              A  ++P        L    L   D   AL  +      L++  ++  IE   N+GV+
Sbjct: 229 FTNALLLNPEHPDCHYSLATAYLQRGDHKEALLHY------LRQLEKKPQIECYYNVGVL 282

Query: 458 HFEKGEFESAHQSFKDAL 475
           H  +     A   FK AL
Sbjct: 283 HMYQERHREAIDYFKQAL 300



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 76/301 (25%), Positives = 129/301 (42%), Gaps = 16/301 (5%)

Query: 141 KGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIR 200
           +G ++ A   +  VLE D     AL G        GR  ++L +  RAL + P      +
Sbjct: 15  QGSLKNALENYHKVLEDDPKQTAALHGAGIALSQLGRNDEALHYIDRALLLEPQ-NATFQ 73

Query: 201 LGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRA 260
              G    + G+L +A  A+ +A+QL P++  A   +A    +  +    +K     Q+A
Sbjct: 74  NSRGNILSQHGKLVEATIAYDQAIQLQPDHATAYNNIANCFFRQKKFDNAKKA---YQKA 130

Query: 261 FEIYPYCAMA-LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 319
             + P+ A A  NY          H  + +L  T    ++H    S ++  LA  Y   G
Sbjct: 131 IALKPHFANAHFNYARLLIELENYHQAIAELKRTVAMSSHH----SAAFSQLAHVYMYLG 186

Query: 320 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 379
           D+ KA  YY    K +    E     Y  G   LK   F+ A+  F   L + P++ +  
Sbjct: 187 DFSKAITYYE---KRLALEPENADAQYDCGLAHLKDNQFQKAIDYFTNALLLNPEHPDCH 243

Query: 380 KALGHIYVQLGQIEKAQELLRKAAKIDPR-DAQAFIDLGELLISSDTG-AALDAFKTART 437
            +L   Y+Q G  ++A  LL    +++ +   + + ++G L +  +    A+D FK A T
Sbjct: 244 YSLATAYLQRGDHKEA--LLHYLRQLEKKPQIECYYNVGVLHMYQERHREAIDYFKQALT 301

Query: 438 L 438
           L
Sbjct: 302 L 302



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 66/330 (20%), Positives = 134/330 (40%), Gaps = 39/330 (11%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
           A + Y+K    D  + +   G G  L   G  ++A       L  +  N      +  + 
Sbjct: 21  ALENYHKVLEDDPKQTAALHGAGIALSQLGRNDEALHYIDRALLLEPQNATFQNSRGNIL 80

Query: 173 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 232
              G+  ++   Y +A+Q+ P    A    I  C ++  +   A++A+Q+A+ L P    
Sbjct: 81  SQHGKLVEATIAYDQAIQLQPDHATAYN-NIANCFFRQKKFDNAKKAYQKAIALKPHFAN 139

Query: 233 ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQ--------- 283
           A    A + +   E     + + +++R   +  + + A + LA+ + + G          
Sbjct: 140 AHFNYARLLI---ELENYHQAIAELKRTVAMSSHHSAAFSQLAHVYMYLGDFSKAITYYE 196

Query: 284 -------------------HFLVEQLTETALAVTNH---GPTKSHSYYNLARSYHSKGDY 321
                              H    Q  +     TN     P     +Y+LA +Y  +GD+
Sbjct: 197 KRLALEPENADAQYDCGLAHLKDNQFQKAIDYFTNALLLNPEHPDCHYSLATAYLQRGDH 256

Query: 322 EKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKA 381
           ++A L+Y+  +++  KP   I  YY +G + +     R A+  F++ L + P+  E    
Sbjct: 257 KEALLHYLRQLEK--KPQ--IECYYNVGVLHMYQERHREAIDYFKQALTLDPNYREAHLN 312

Query: 382 LGHIYVQLGQIEKAQELLRKAAKIDPRDAQ 411
           +  +Y+++ QI++A E       + P D++
Sbjct: 313 IAAVYLKINQIKQAIEHYESTLVLKPNDSE 342


>gi|118359319|ref|XP_001012899.1| TPR Domain containing protein [Tetrahymena thermophila]
 gi|89294666|gb|EAR92654.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
          Length = 1122

 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 97/432 (22%), Positives = 195/432 (45%), Gaps = 60/432 (13%)

Query: 49  EYFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEE 108
           EYF QGK EQ   IL    S ++++Y AD  ++              +G I  ++ E + 
Sbjct: 402 EYFMQGKQEQ--AILNLKQSIKLNKYDADSHFK--------------IGYIYYEKGEDD- 444

Query: 109 HFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADR---DNVPAL 165
              +A  Y+ +A +I+ +    +   G +   + + E A   +   ++ +    DN   L
Sbjct: 445 ---IAINYFKQAIKINPYYEQAYNMIGNIYNYQQKQEDAIIWYDKAIQLNPNFGDNYNNL 501

Query: 166 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 225
             Q    +N+ ++  +L +++++ +   +   A  +  GLC   L Q  +A Q +Q+A++
Sbjct: 502 GLQY---YNQKQFDQALWYFQKSAEKSKNLVNA-YVNQGLCYQNLNQQDEAIQQYQKAIE 557

Query: 226 LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYP-----YCAMALNYLANHFFF 280
           +DP   +A   LA++     +   +++ +E+ Q A ++ P     Y  M + Y +     
Sbjct: 558 VDPNFSDAHYNLALI---YYDKKLMKESIEQYQIAIDVKPSSYDAYYNMGIAYHS----- 609

Query: 281 TGQHFLVEQLTETALAVTNHGPTK---SHSYYNLARSYHSKGDYEKAGLYYMASVKEINK 337
                 ++Q  E   +  N    K   +++ YNL  +Y+  G YE++  YY +   ++N 
Sbjct: 610 ------LQQYDEAIQSYKNAIKIKANYNNAIYNLGVTYYDLGQYEESLKYY-SQAYDLNP 662

Query: 338 PHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQE 397
             +F+   Y  G    KL  +  AL  +++ +++ P   +  K L  IYV+ G+ E+A E
Sbjct: 663 --DFVDICYSTGLSYEKLNKYPEALDWYKRAIKLDPLYMDPFKRLIDIYVKEGRQEEAIE 720

Query: 398 LLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPI--EVLNNIG 455
            L K   +  ++   +  LG +         LD    A    K+A E+ P   +   N+G
Sbjct: 721 FLTKGIGLAEKNEVQYFYLGVIKFKE---LKLDE---AMQFFKQAIEKNPSLEDAHFNLG 774

Query: 456 VIHFEKGEFESA 467
           + ++++  ++ A
Sbjct: 775 LCYYKQKNYDEA 786



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 114/595 (19%), Positives = 233/595 (39%), Gaps = 101/595 (16%)

Query: 47  AREYFKQGK----VEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETK 102
           A  +F Q K    +E+F++++E   +P   E Y+ + Y    I + +    ++   IE  
Sbjct: 332 AYSFFDQKKESEAIEKFKKVIE--INPNSYETYSSIGYCYYIIGDTINSEESFKKSIELN 389

Query: 103 QREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNV 162
           +     ++ L  +Y+                       +G+ EQA    K  ++ ++ + 
Sbjct: 390 KNYSRAYYYLGCEYF----------------------MQGKQEQAILNLKQSIKLNKYDA 427

Query: 163 PALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL--------------------- 201
            +      + + +G    ++ ++K+A++++P    A  +                     
Sbjct: 428 DSHFKIGYIYYEKGEDDIAINYFKQAIKINPYYEQAYNMIGNIYNYQQKQEDAIIWYDKA 487

Query: 202 ------------GIGLCRYKLGQLGKARQAFQRALQLDPENVEALV--ALAVMDLQANEA 247
                        +GL  Y   Q  +A   FQ++ +     V A V   L   +L   + 
Sbjct: 488 IQLNPNFGDNYNNLGLQYYNQKQFDQALWYFQKSAEKSKNLVNAYVNQGLCYQNLNQQDE 547

Query: 248 AGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHS 307
           A     +++ Q+A E+ P  + A   LA    +  +  + E + +  +A+ +  P+   +
Sbjct: 548 A-----IQQYQKAIEVDPNFSDAHYNLA--LIYYDKKLMKESIEQYQIAI-DVKPSSYDA 599

Query: 308 YYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEK 367
           YYN+  +YHS   Y++A   Y  ++K     +  I   Y LG     LG +  +L  + +
Sbjct: 600 YYNMGIAYHSLQQYDEAIQSYKNAIKIKANYNNAI---YNLGVTYYDLGQYEESLKYYSQ 656

Query: 368 VLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGA 427
             ++ PD  +   + G  Y +L +  +A +  ++A K+DP     F  L ++ +      
Sbjct: 657 AYDLNPDFVDICYSTGLSYEKLNKYPEALDWYKRAIKLDPLYMDPFKRLIDIYVKEGRQE 716

Query: 428 ALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDG-------IW 480
               F T    L +  E   ++    +GVI F++ + + A Q FK A+            
Sbjct: 717 EAIEFLTKGIGLAEKNE---VQYF-YLGVIKFKELKLDEAMQFFKQAIEKNPSLEDAHFN 772

Query: 481 LTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHD 540
           L L   K K Y  D +       D       E   N  +L +N + + +   + LE+   
Sbjct: 773 LGLCYYKQKNY--DEAIREYLIAD-------ELKPNQSDLSYN-LGITYYYRKELEEAKK 822

Query: 541 TVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNA 595
               S+          +Y DAY  L  +     N + +I++  ++ +++ K+ +A
Sbjct: 823 WYLKSIQLN------PNYCDAYFNLGIVYYEEQNYEEAIQMYKKSFELDSKFADA 871



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 62/254 (24%), Positives = 110/254 (43%), Gaps = 20/254 (7%)

Query: 169 ACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDP 228
             ++F   +  ++++F+K+A++ +PS   A    +GLC YK     +A + +  A +L P
Sbjct: 740 GVIKFKELKLDEAMQFFKQAIEKNPSLEDA-HFNLGLCYYKQKNYDEAIREYLIADELKP 798

Query: 229 ENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYP-YCAMALNYLANHFFFTGQHFLV 287
              +    L +      E    +K   K   + ++ P YC        + +F  G  +  
Sbjct: 799 NQSDLSYNLGITYYYRKELEEAKKWYLK---SIQLNPNYC--------DAYFNLGIVYYE 847

Query: 288 EQLTETALAVTNHGPTKSHSY----YNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIF 343
           EQ  E A+ +          +    YN + +Y    D E+  +Y+     EI+   + I 
Sbjct: 848 EQNYEEAIQMYKKSFELDSKFADACYNTSITYDKLNDSEQC-IYWSEKAIEIDP--KCID 904

Query: 344 PYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAA 403
            Y  LGQ+  KL +   AL  + K++++ PD+   L  LG  Y  L    +A E+  K  
Sbjct: 905 TYKFLGQIFSKLDNNEKALKIYLKLVDLLPDDENALYNLGITYQLLHMYNEAIEVFEKGY 964

Query: 404 KIDPRDAQAFIDLG 417
           KI+P       +LG
Sbjct: 965 KINPNQCDLLYNLG 978



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 116/528 (21%), Positives = 215/528 (40%), Gaps = 65/528 (12%)

Query: 297 VTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLG 356
           V    P    +Y ++   Y+  GD   +   +  S+ E+NK +     YY LG      G
Sbjct: 351 VIEINPNSYETYSSIGYCYYIIGDTINSEESFKKSI-ELNKNYSR--AYYYLGCEYFMQG 407

Query: 357 DFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDL 416
               A+ N ++ +++   + ++   +G+IY + G+ + A    ++A KI+P   QA+  +
Sbjct: 408 KQEQAILNLKQSIKLNKYDADSHFKIGYIYYEKGEDDIAINYFKQAIKINPYYEQAYNMI 467

Query: 417 GELL-ISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
           G +         A+  +  A  L    G+       NN+G+ ++ + +F+ A   F+ + 
Sbjct: 468 GNIYNYQQKQEDAIIWYDKAIQLNPNFGDNY-----NNLGLQYYNQKQFDQALWYFQKSA 522

Query: 476 GDGIWLTLLDSKTKTYVIDASASMLQFKDM--------QLFHRFENDGNHVELPWNKVTV 527
                      K+K  V       L ++++        Q     E D N  +  +N   +
Sbjct: 523 ----------EKSKNLVNAYVNQGLCYQNLNQQDEAIQQYQKAIEVDPNFSDAHYNLALI 572

Query: 528 LFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALK 587
            ++   + E I     A      I  K   Y DAY  +     +      +I+    A+K
Sbjct: 573 YYDKKLMKESIEQYQIA------IDVKPSSY-DAYYNMGIAYHSLQQYDEAIQSYKNAIK 625

Query: 588 VNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDS-----YAT-LSLGNWN-YF 640
           +   Y NA+  LG   +   D  + +E+ +  S A D         Y+T LS    N Y 
Sbjct: 626 IKANYNNAIYNLG---VTYYDLGQYEESLKYYSQAYDLNPDFVDICYSTGLSYEKLNKYP 682

Query: 641 AALRNEKRAPKLEATHLEKAK---ELYTRVIVQHTSNLYAANGAGVVLAEKGQ---FDVS 694
            AL   KRA KL+  +++  K   ++Y +   Q  +  +   G G  LAEK +   F + 
Sbjct: 683 EALDWYKRAIKLDPLYMDPFKRLIDIYVKEGRQEEAIEFLTKGIG--LAEKNEVQYFYLG 740

Query: 695 KDLFTQVQEAASGSVFVQ-------MPDVWINLAHVYFAQGNFALAMKMY--QNCLRKFY 745
              F +++   +   F Q       + D   NL   Y+ Q N+  A++ Y   + L+   
Sbjct: 741 VIKFKELKLDEAMQFFKQAIEKNPSLEDAHFNLGLCYYKQKNYDEAIREYLIADELKP-- 798

Query: 746 YNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVA 793
               + +   L  T+Y  ++ ++ KK  L++I L P+     F+ G+ 
Sbjct: 799 --NQSDLSYNLGITYYYRKELEEAKKWYLKSIQLNPNYCDAYFNLGIV 844


>gi|365894959|ref|ZP_09433090.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family;
           TPR domain protein [Bradyrhizobium sp. STM 3843]
 gi|365424290|emb|CCE05632.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family;
           TPR domain protein [Bradyrhizobium sp. STM 3843]
          Length = 740

 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 87/312 (27%), Positives = 135/312 (43%), Gaps = 23/312 (7%)

Query: 169 ACVEFNR-GRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLD 227
           A VE  R GR++D+    ++ L++ P    A+ L +G+     G+L  A QA  RA+ L+
Sbjct: 29  AAVEAYRAGRHADTQAICRQILELLPDYFPALHL-LGISALDCGRLDVAEQALTRAVALE 87

Query: 228 PENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLV 287
           P + EALV L ++          RK  E   RA    P  A+A   L N         L 
Sbjct: 88  PRHAEALVNLGLVYFHQKRYEEARKLQE---RATAAKPNFAVAFTTLGNTLM---NMRLF 141

Query: 288 EQLTET---ALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFP 344
           +Q  E    A+AV    P  + +Y N   +      +++A   +  ++  +N  H  +  
Sbjct: 142 DQALEAHQRAIAVK---PDYADAYCNRGMTQLLMQRHQEAYESFNRALA-LNPRH--MHA 195

Query: 345 YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAK 404
            +GLG V + L     ALT+F   L I P N   L   G +++Q+G  E A+     A  
Sbjct: 196 TFGLGLVGVNLRHCDQALTSFNAALAISPGNAAILAQRGRLHLQMGHFEPAEADFDAALV 255

Query: 405 IDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKK-AGEEVPIEVLNNIGVIHFEKGE 463
            DP    A   LG+  ++   G    A      +L++ A  EV    L  +G    ++G+
Sbjct: 256 ADPNLEAAL--LGKAHVNVLNGNVAPAMAACNKVLEQNASSEV---ALVWLGACLAKQGD 310

Query: 464 FESAHQSFKDAL 475
              A Q F  AL
Sbjct: 311 VTGAIQLFDRAL 322



 Score = 48.9 bits (115), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 72/157 (45%), Gaps = 6/157 (3%)

Query: 80  YERIAILNALGVYYTY-LGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLL 138
           + R   LN   ++ T+ LG +    R  ++    A   +N A  I     +    +G+L 
Sbjct: 182 FNRALALNPRHMHATFGLGLVGVNLRHCDQ----ALTSFNAALAISPGNAAILAQRGRLH 237

Query: 139 LAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGA 198
           L  G  E A + F   L AD +   ALLG+A V    G  + ++    + L+ + S   A
Sbjct: 238 LQMGHFEPAEADFDAALVADPNLEAALLGKAHVNVLNGNVAPAMAACNKVLEQNASSEVA 297

Query: 199 IRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV 235
           + + +G C  K G +  A Q F RAL++ P+  EA+ 
Sbjct: 298 L-VWLGACLAKQGDVTGAIQLFDRALEIKPDFEEAVT 333


>gi|119493195|ref|ZP_01624070.1| TPR repeat protein [Lyngbya sp. PCC 8106]
 gi|119452760|gb|EAW33937.1| TPR repeat protein [Lyngbya sp. PCC 8106]
          Length = 899

 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 60/215 (27%), Positives = 99/215 (46%), Gaps = 20/215 (9%)

Query: 246 EAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH---GP 302
           E   I   +E  Q+   + P CA+A   L N         + EQLTE ALA        P
Sbjct: 15  EQGKIESSIEICQQVLRLSPRCAVAYRILGNI------REVQEQLTEAALAYAKAIELQP 68

Query: 303 TKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSAL 362
             + +Y +LA+ Y + G  + A L Y  ++K       +I  YY LG+   + G+F S++
Sbjct: 69  DDAVAYAHLAQLYRNAGWIDDAVLLYQTAIKLQTS---WIALYYHLGEAFYQQGNFTSSI 125

Query: 363 TNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS 422
            +++KV+   P   +    L  ++    Q+++A +LL++   ID    +A+  LG LLI 
Sbjct: 126 ASYQKVITKNPKFVKAYLGLALVFNSQSQVDQAIKLLKRVINIDSNYTEAYNTLGCLLIE 185

Query: 423 SDTGAALDAFKTARTLLKKAGEEVPIEVL--NNIG 455
                    F  A  + +KA  + P   +  NN+G
Sbjct: 186 KQQ------FLDAVEIFQKAINQKPEWAILYNNLG 214



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 72/336 (21%), Positives = 144/336 (42%), Gaps = 20/336 (5%)

Query: 135 GQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS 194
           G +   + ++ +A+ A+   +E   D+  A    A +  N G   D++  Y+ A+++  S
Sbjct: 44  GNIREVQEQLTEAALAYAKAIELQPDDAVAYAHLAQLYRNAGWIDDAVLLYQTAIKLQTS 103

Query: 195 CPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGM 254
              A+   +G   Y+ G    +  ++Q+ +  +P+ V+A + LA++    N  + + + +
Sbjct: 104 W-IALYYHLGEAFYQQGNFTSSIASYQKVITKNPKFVKAYLGLALV---FNSQSQVDQAI 159

Query: 255 EKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARS 314
           + ++R   I      A N L        Q FL     E      N  P  +  Y NL ++
Sbjct: 160 KLLKRVINIDSNYTEAYNTLGC-LLIEKQQFL--DAVEIFQKAINQKPEWAILYNNLGQA 216

Query: 315 YHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPD 374
           + +    EK G    A  + +         Y  L ++  +   ++ A+  F+K +E  P 
Sbjct: 217 WLA---LEKKGQAIKAYHRALELQPSLTIAYLNLAKLYQQHNHYKRAVDYFQKAIEQTPK 273

Query: 375 NCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKT 434
           N       G+   + GQ ++A    +KA  +DP+  +A+    E +  S+T A  D ++ 
Sbjct: 274 NILAYSDCGYSLQKQGQFDQAMVYYQKAIALDPKFVEAYCRRFESMSISETEA--DEWQL 331

Query: 435 ARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQS 470
           A+           +  L ++  I+F  G F ++ QS
Sbjct: 332 AKNAC--------VRFLRSLQQINFNSGNFNASDQS 359



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 69/313 (22%), Positives = 139/313 (44%), Gaps = 24/313 (7%)

Query: 169 ACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDP 228
           A     +G+   S+E  ++ L++ P C  A R+ +G  R    QL +A  A+ +A++L P
Sbjct: 10  ALSHLEQGKIESSIEICQQVLRLSPRCAVAYRI-LGNIREVQEQLTEAALAYAKAIELQP 68

Query: 229 ENVEALVALAVMDLQA---NEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 285
           ++  A   LA +   A   ++A  + +   K+Q ++       +AL Y     F+   +F
Sbjct: 69  DDAVAYAHLAQLYRNAGWIDDAVLLYQTAIKLQTSW-------IALYYHLGEAFYQQGNF 121

Query: 286 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 345
                  +   V    P    +Y  LA  ++S+   ++A +  +  V  IN    +   Y
Sbjct: 122 TSS--IASYQKVITKNPKFVKAYLGLALVFNSQSQVDQA-IKLLKRV--INIDSNYTEAY 176

Query: 346 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKI 405
             LG + ++   F  A+  F+K +   P+       LG  ++ L +  +A +   +A ++
Sbjct: 177 NTLGCLLIEKQQFLDAVEIFQKAINQKPEWAILYNNLGQAWLALEKKGQAIKAYHRALEL 236

Query: 406 DPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVL--NNIGVIHFEKGE 463
            P    A+++L +L    +       +K A    +KA E+ P  +L  ++ G    ++G+
Sbjct: 237 QPSLTIAYLNLAKLYQQHNH------YKRAVDYFQKAIEQTPKNILAYSDCGYSLQKQGQ 290

Query: 464 FESAHQSFKDALG 476
           F+ A   ++ A+ 
Sbjct: 291 FDQAMVYYQKAIA 303



 Score = 42.0 bits (97), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 32/135 (23%), Positives = 65/135 (48%), Gaps = 4/135 (2%)

Query: 131 WVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQ 190
           ++G   +  ++ +V+QA    K V+  D +   A     C+   + ++ D++E +++A+ 
Sbjct: 142 YLGLALVFNSQSQVDQAIKLLKRVINIDSNYTEAYNTLGCLLIEKQQFLDAVEIFQKAIN 201

Query: 191 VHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGI 250
             P     +   +G     L + G+A +A+ RAL+L P    A + LA +  Q N     
Sbjct: 202 QKPEW-AILYNNLGQAWLALEKKGQAIKAYHRALELQPSLTIAYLNLAKLYQQHNH---Y 257

Query: 251 RKGMEKMQRAFEIYP 265
           ++ ++  Q+A E  P
Sbjct: 258 KRAVDYFQKAIEQTP 272


>gi|307611344|emb|CBX01005.1| hypothetical protein LPW_27071 [Legionella pneumophila 130b]
          Length = 577

 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 79/343 (23%), Positives = 142/343 (41%), Gaps = 26/343 (7%)

Query: 86  LNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVE 145
           L+ LG+ Y  LG +E            A  Y+ +A +I+ ++              G+++
Sbjct: 42  LHFLGLTYAQLGDMEN-----------AILYFLQARKINPNDVGILNNLANAYKKAGQLD 90

Query: 146 QASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGL 205
           +A   ++  +E   + V A    A        Y  +L  Y  A+   P    A    +GL
Sbjct: 91  EAIKYYQEAIEIKPEYVQAHNNLAATYALLNNYQKALHHYVIAVNTEPDFSAA-HFNLGL 149

Query: 206 CRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYP 265
              K  QL  A+  F   + L+P++ EA   L ++ L+ N  A   +   K+      + 
Sbjct: 150 LLLKNQQLSAAKTQFNNVIALNPQHREAQFYLGILHLEDNLLAEAEQAFHKVLEQDHEHV 209

Query: 266 YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAG 325
              + L  +A       Q+ L       ALA+ N      +   NLA ++     +E A 
Sbjct: 210 QSLINLGVIA---LKREQNQLAVDYFTKALALDNEDIDARN---NLAATFMHHDRFENAL 263

Query: 326 LYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 385
           ++Y   +K+     E++   Y  G  Q+ LG    A   F+++L +  D+  +L  L  I
Sbjct: 264 MHYDVLLKKEPNNLEYL---YNSGVAQMALGHLNEATLLFDQILTLESDHTPSLNNLAAI 320

Query: 386 YVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAA 428
           Y+++   E A+E L +A  I+P D      +   ++++ TGA 
Sbjct: 321 YLKMDMRETAREYLERALAINPDDV-----VSRHMLNAITGAT 358


>gi|156743163|ref|YP_001433292.1| hypothetical protein Rcas_3220 [Roseiflexus castenholzii DSM 13941]
 gi|156234491|gb|ABU59274.1| Tetratricopeptide TPR_2 repeat protein [Roseiflexus castenholzii DSM
            13941]
          Length = 1178

 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 105/441 (23%), Positives = 179/441 (40%), Gaps = 52/441 (11%)

Query: 46   IAREYFKQGKVEQFRQILEEG--SSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQ 103
            ++R Y   G+++  R +LE G  ++      YAD+ +E       LG+    LG+I+  +
Sbjct: 722  MSRLYRDAGRLDAARNVLERGQQNTARSARAYADIAHE-------LGLVLIDLGEIDRAE 774

Query: 104  REKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVP 163
            R+ E          +    +  H     +   QL   KG    A+  +   L+A   + P
Sbjct: 775  RQFEAAI------GSNPRHVRSH-----LMLAQLERRKGNDRAAARRYAAALDAGASD-P 822

Query: 164  ALLGQACVEFNRGR-YSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQR 222
            A+L Q  +     R Y+ ++  Y+RA+   P      R    L    +G+L  A ++ +R
Sbjct: 823  AVLDQIGMTLIELREYAPAVTAYERAIAQQPGN-AIFRYRAALAYLGIGRLDAADESARR 881

Query: 223  ALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA------LNYLAN 276
            AL+  P   EALV L  + LQ  ++   +   ++ + A +  P  A A      +  +  
Sbjct: 882  ALERQPIYPEALVLLGDIALQRGDS---QAANQQYRAALQQNPALAAAHIGLGRVAAVGG 938

Query: 277  HFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEIN 336
            ++     HFL               P    ++  L  +    GD + A   Y  +++  +
Sbjct: 939  NWSIAAGHFL---------NAVQADPQSPDAFLWLGEARVRVGDVDDAISAYQQALQLRS 989

Query: 337  KPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQ 396
               E +F   GL Q Q   G    AL N  + LE      E    LG IY Q G   +A 
Sbjct: 990  AFPEALF---GLAQAQFGAGRIDEALRNVNRALEQRSRYAEAFLLLGKIYEQQGYSTRAL 1046

Query: 397  ELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNI 454
            +  ++A   +PR A+       LLI +D          AR  L+ A    P   E    +
Sbjct: 1047 DAYKQAVDANPRLAEPHFRRALLLIRADR------LSEARDDLEIAARLEPNFAEAHYWL 1100

Query: 455  GVIHFEKGEFESAHQSFKDAL 475
            G ++F +  F++A   F++A+
Sbjct: 1101 GRVYFAQRNFQAAVNRFREAV 1121


>gi|427727407|ref|YP_007073644.1| hypothetical protein Nos7524_0123 [Nostoc sp. PCC 7524]
 gi|427363326|gb|AFY46047.1| tetratricopeptide repeat protein [Nostoc sp. PCC 7524]
          Length = 516

 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 83/382 (21%), Positives = 156/382 (40%), Gaps = 62/382 (16%)

Query: 46  IAREYFKQGKV----EQFRQILEE-GSSPEIDEYYADVRYERIAILNALGVYYTYLGKIE 100
            A  YF +G +    E+F + LE+   + +I+ Y+A+  Y R        +  +YLG +E
Sbjct: 77  FAEAYFMRGNLRAGLEKFSEALEDYNEAIDINPYFAEAYYCR-------SIARSYLGDVE 129

Query: 101 TKQREKEEHFILATQYYNKASRIDMHEPST-----WVGKGQLLLAKGEVEQASSAFKIVL 155
               +  + +I      +  S ++ H+  +     +  KG      G++E+A   F   L
Sbjct: 130 GAVNDFNQ-YIFNKDDSSCYSHVNKHQNDSKLAEAFFNKGLYCAESGDLEEAIQNFNQAL 188

Query: 156 EADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGK 215
                   A   +  +  N G   +++  + ++L + P    A     G+ R +LG L  
Sbjct: 189 NIQSQYTEAYYNRGLIYANLGDLKEAINDFNKSLVLQPKNFIAY-YNRGIARAELGYLEA 247

Query: 216 ARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLA 275
           A + F +++ ++P+  EA     V+     +   I+K ++  ++A  I            
Sbjct: 248 ATEDFTKSISINPKFAEAYNNRGVI---CRKLGDIKKAIKDFKKAINI------------ 292

Query: 276 NHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEI 335
                                        +++Y+NLA SY    D + A   Y  +V  +
Sbjct: 293 -------------------------NSNYANAYHNLAFSYQQLRDMKGAIEAYTQTV--L 325

Query: 336 NKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKA 395
             P++    YY  G V+  LGD + A+ +F + L + P+  ++    G +  QLG IE A
Sbjct: 326 INPND-AQAYYNRGIVRADLGDTKGAIEDFNQSLHLNPNYAKSFNYRGIVRNQLGDIEGA 384

Query: 396 QELLRKAAKIDPRDAQAFIDLG 417
            E   +A  I P   +A+ + G
Sbjct: 385 IEDFNRALYISPGFDEAYSNRG 406



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 98/462 (21%), Positives = 177/462 (38%), Gaps = 78/462 (16%)

Query: 176 GRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV 235
           G +  +++ Y++A++++ +   A     G+   KLG L  A + +  A+ ++ +  EA  
Sbjct: 24  GDFEGAIKDYEQAIRINSNLAQAY-YNRGMAFAKLGNLEDAIEDYDEAIYINEDFAEAYF 82

Query: 236 ALAVMDLQANEAAGIRK---GMEKMQRAFEIYPYCA-------MALNYLA------NHFF 279
                 ++ N  AG+ K    +E    A +I PY A       +A +YL       N F 
Sbjct: 83  ------MRGNLRAGLEKFSEALEDYNEAIDINPYFAEAYYCRSIARSYLGDVEGAVNDF- 135

Query: 280 FTGQHFLVEQLTETALAVTNHGPTK--SHSYYNLARSYHSKGDYEKAGLYYMASVKEINK 337
              Q+   +  +     V  H      + +++N        GD E+A   +  +   +N 
Sbjct: 136 --NQYIFNKDDSSCYSHVNKHQNDSKLAEAFFNKGLYCAESGDLEEAIQNFNQA---LNI 190

Query: 338 PHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQE 397
             ++   YY  G +   LGD + A+ +F K L + P N       G    +LG +E A E
Sbjct: 191 QSQYTEAYYNRGLIYANLGDLKEAINDFNKSLVLQPKNFIAYYNRGIARAELGYLEAATE 250

Query: 398 LLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVI 457
              K+  I+P+ A+A+                                      NN GVI
Sbjct: 251 DFTKSISINPKFAEAY--------------------------------------NNRGVI 272

Query: 458 HFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNH 517
             + G+ + A + FK A+        ++S       + + S  Q +DM+     E     
Sbjct: 273 CRKLGDIKKAIKDFKKAIN-------INSNYANAYHNLAFSYQQLRDMK--GAIEAYTQT 323

Query: 518 VELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQL 577
           V +  N     +N   +   + DT  A   +   L    +Y  ++     +     +++ 
Sbjct: 324 VLINPNDAQAYYNRGIVRADLGDTKGAIEDFNQSLHLNPNYAKSFNYRGIVRNQLGDIEG 383

Query: 578 SIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAA 619
           +IE  N AL ++  +  A S  G+   K  DW  A E +  A
Sbjct: 384 AIEDFNRALYISPGFDEAYSNRGNTRKKLGDWKGAIEDYSQA 425


>gi|54295320|ref|YP_127735.1| hypothetical protein lpl2405 [Legionella pneumophila str. Lens]
 gi|53755152|emb|CAH16645.1| hypothetical protein lpl2405 [Legionella pneumophila str. Lens]
          Length = 577

 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 82/367 (22%), Positives = 150/367 (40%), Gaps = 29/367 (7%)

Query: 65  EGSSPEIDEYYADVRYE---RIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKAS 121
           EG  P+    Y  +  +       L+ LG+ Y  LG +E            A  Y+ +A 
Sbjct: 18  EGHLPQAISLYEQILAQSPKHTETLHFLGLTYAQLGDMEN-----------AILYFLQAR 66

Query: 122 RIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDS 181
           +I+ ++              G++++A   ++  +E   + V A    A        Y  +
Sbjct: 67  KINPNDVGILNNLANAYKKAGQLDEAIKYYQQAIEIKPEYVQAHNNLAATYALLNNYQKA 126

Query: 182 LEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMD 241
           L  Y  A+   P    A    +GL   K  QL  A+  F   + L+P++ EA   L ++ 
Sbjct: 127 LHHYVIAVNTEPDFSAA-HFNLGLLLLKNQQLSAAKTQFNNVIALNPQHREAQFYLGILH 185

Query: 242 LQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG 301
           L+ N  +   +  +K+      +    + L  +A       Q+ L       ALA+ N  
Sbjct: 186 LEDNLLSEAEQAFQKVLEQDHEHVQSLINLGVIA---LKREQNQLAVDYFTKALALDNED 242

Query: 302 PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSA 361
               +   NLA ++     +E A ++Y   +K+     E++   Y  G  Q+ LG    A
Sbjct: 243 IDARN---NLAATFMHHDRFENALMHYDVLLKKEPDNLEYL---YNSGVAQMALGHLNEA 296

Query: 362 LTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLI 421
              F+++L +  D+  +L  L  IY+++   E A+E L +A  I+P D      +   ++
Sbjct: 297 TLLFDQILTLQSDHTPSLNNLAAIYLKMDMRETAREYLERALAINPDDV-----VSRHML 351

Query: 422 SSDTGAA 428
           ++ TGA 
Sbjct: 352 NAITGAT 358


>gi|118371952|ref|XP_001019174.1| TPR Domain containing protein [Tetrahymena thermophila]
 gi|89300941|gb|EAR98929.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
          Length = 772

 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 68/275 (24%), Positives = 123/275 (44%), Gaps = 21/275 (7%)

Query: 136 QLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSC 195
           QL L KG+ ++    F         N   L  QA  E +  +Y ++    +R ++++   
Sbjct: 291 QLNLEKGKDDEIGYYF---------NQTELFQQAQKEIDNHKYQEAQVTLERLVKINTHN 341

Query: 196 PGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGME 255
              + L +GL   +  Q  ++R   Q+ L ++P+N    +AL+ M     E   +++ M 
Sbjct: 342 DQYLAL-LGLTHLEQYQCEESRSISQKCLSINPKNE---IALSCMGYYYYEKNDLKQAMC 397

Query: 256 KMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSY 315
            +Q+   + P    AL Y A  F  + Q  L E+L     A++ +     +S   + + Y
Sbjct: 398 YLQKCLNLNPKNYRALTYKA--FVLSNQQKLDEELLTLKEAIS-YNQNYPYSILQIGKCY 454

Query: 316 HSKGDYEKAGLYYMASVKEINKPHEFIF-PYYGLGQVQLKLGDFRSALTNFEKVLEIYPD 374
             K  YE A    + S K++ K    IF PYY LG +  +  +F  +++ F K LE+   
Sbjct: 455 FKKKMYEDA----ITSFKQVIKLLPTIFSPYYCLGIIYYERSEFDQSISYFNKALELNSS 510

Query: 375 NCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRD 409
           N   L +L  +Y++      A E+L    ++ P +
Sbjct: 511 NQNCLYSLAKVYLETFNYSNAIEILNTLVRLFPSN 545



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 70/301 (23%), Positives = 135/301 (44%), Gaps = 28/301 (9%)

Query: 128 PSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKR 187
           P + +  G+    K   E A ++FK V++              + + R  +  S+ ++ +
Sbjct: 444 PYSILQIGKCYFKKKMYEDAITSFKQVIKLLPTIFSPYYCLGIIYYERSEFDQSISYFNK 503

Query: 188 ALQVHPSCPGAIRLGIGLCRYKLGQL-------GKARQAFQRALQLDPENVEALVALAVM 240
           AL+++ S           C Y L ++         A +     ++L P N    + LA +
Sbjct: 504 ALELNSSNQN--------CLYSLAKVYLETFNYSNAIEILNTLVRLFPSND---LYLATL 552

Query: 241 DLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 300
            L  +E    +K ME  Q++ +I P   +ALN LA ++F   Q+ L  Q  ++++ V   
Sbjct: 553 ALAYSEIKDEQKVMEFSQKSLQINPQNILALNCLAYYYFLKQQNQLAIQCLQSSIKV--- 609

Query: 301 GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFP--YYGLGQVQLKLGDF 358
            P    +Y+  A+   S+G +E A L    S+++ +K     FP   + LGQV  ++G  
Sbjct: 610 NPCNFRAYFYQAQILLSEGKHEDAILSAKYSMQQNSK-----FPNAQFLLGQVFEQIGKM 664

Query: 359 RSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGE 418
             A+  F++ + I          L  IY + GQ + A  + + A + + + A+ + +LG+
Sbjct: 665 DKAIKYFQEAIMIQAKYELPYIDLSQIYRKKGQYDDALFICKLALQNNIKSAKIYNELGK 724

Query: 419 L 419
           +
Sbjct: 725 I 725


>gi|195998235|ref|XP_002108986.1| hypothetical protein TRIADDRAFT_18483 [Trichoplax adhaerens]
 gi|190589762|gb|EDV29784.1| hypothetical protein TRIADDRAFT_18483 [Trichoplax adhaerens]
          Length = 474

 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 65/245 (26%), Positives = 113/245 (46%), Gaps = 22/245 (8%)

Query: 236 ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETAL 295
           A+ V  L   +   I++ +E  Q+A  + P     L  +A   F   +H       + A+
Sbjct: 48  AIYVQGLILRQEGKIQESLEMFQKASILNPKNIDNLKQVARSLFLLARH-------KAAI 100

Query: 296 AVTNHGPTKSHSY-----YNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQ 350
            V N    +  S      +N    Y    ++ KA  Y  A++   N  HE    Y  LG+
Sbjct: 101 EVYNEISRQQTSVDWEVLHNQGICYLYLKEFTKAKEYLKAAID--NNRHEI--SYIHLGR 156

Query: 351 VQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDA 410
           V    G+ + A+  +++ LE  P+N E +  LG +Y+++GQ +KA E L +A   +P + 
Sbjct: 157 VFALEGNLQIAIDTYKQALEFSPENTEIMTTLGLLYIKIGQNQKAFEQLGQALIYNPSNV 216

Query: 411 QAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQ 469
           +A +  G ++ + +D   AL  ++ A ++     E  P+   NNIG+  F K +F +A  
Sbjct: 217 KAILAAGSMMQAHNDFDVALMKYRIAASV---EPESPPL--WNNIGMCFFGKKKFVAAVS 271

Query: 470 SFKDA 474
             K A
Sbjct: 272 CLKRA 276


>gi|186475487|ref|YP_001856957.1| TPR repeat-containing protein [Burkholderia phymatum STM815]
 gi|184191946|gb|ACC69911.1| TPR repeat-containing protein [Burkholderia phymatum STM815]
          Length = 615

 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 80/328 (24%), Positives = 144/328 (43%), Gaps = 22/328 (6%)

Query: 142 GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 201
           G ++ A   ++  L+ D  +V AL     +   +G++ ++ +  +RA  + P    A++L
Sbjct: 15  GRLDDAERGYRATLDLDPAHVDALHLLGVLRHQQGQHEEAADLVRRAADLRPQD-AALQL 73

Query: 202 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRK-GMEKMQRA 260
            +G     LG+L +A + F+ AL L P    A   L      A   AG  +  ++  Q++
Sbjct: 74  NLGNALKALGRLDQAIERFRNALTLAPTFPMAHYNLG----NAYALAGRHEDAVDAFQKS 129

Query: 261 FEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGD 320
             + P  A +   L N     G+H         AL +    P  + ++ N+  + ++ G 
Sbjct: 130 LRLQPMDASSHVNLGNALHALGRHREAADSFRRALELR---PGHAGAHNNMGMALNALGS 186

Query: 321 YEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLK 380
             +AG ++ A++K   +   F+   + L       G    A+T FE VL +       L 
Sbjct: 187 ATEAGAHFRAALKIEPR---FVAARFNLANTLDATGQHEQAVTEFEAVLAMQSSLPPALF 243

Query: 381 ALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG---ELLISSDTGAALDAFKTART 437
            LG+    LG+  +A+    +A  +DP  A A++ LG     L + D  AA+ AF  A  
Sbjct: 244 GLGNALASLGRHAEARPRFERAVGLDPAFALAWLSLGAAHHALGAHD--AAVRAFDQALR 301

Query: 438 LLKKAGEEVPIEVLNNIGVIHFEKGEFE 465
           L      ++P+  +N  GV     G+F+
Sbjct: 302 LRP----DLPMAHMNR-GVALLTLGDFK 324



 Score = 43.1 bits (100), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 77/322 (23%), Positives = 128/322 (39%), Gaps = 29/322 (9%)

Query: 356 GDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFID 415
           G    A   +   L++ P + + L  LG +  Q GQ E+A +L+R+AA + P+DA   ++
Sbjct: 15  GRLDDAERGYRATLDLDPAHVDALHLLGVLRHQQGQHEEAADLVRRAADLRPQDAALQLN 74

Query: 416 LGELLIS-SDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDA 474
           LG  L +      A++ F+ A TL        P+    N+G  +   G  E A  +F+ +
Sbjct: 75  LGNALKALGRLDQAIERFRNALTL----APTFPM-AHYNLGNAYALAGRHEDAVDAFQKS 129

Query: 475 LGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDG--NHVELPWNKVTVLFNLA 532
           L     L  +D+ +   + +A  ++ +       HR   D     +EL         N+ 
Sbjct: 130 LR----LQPMDASSHVNLGNALHALGR-------HREAADSFRRALELRPGHAGAHNNMG 178

Query: 533 RLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKY 592
             L  +     A   +R  L     +V A   LA    A    + ++      L +    
Sbjct: 179 MALNALGSATEAGAHFRAALKIEPRFVAARFNLANTLDATGQHEQAVTEFEAVLAMQSSL 238

Query: 593 PNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYF-----AALRNEK 647
           P AL  LG+         +A+  F  A    D   + A LSLG  ++      AA+R   
Sbjct: 239 PPALFGLGNALASLGRHAEARPRFERAV-GLDPAFALAWLSLGAAHHALGAHDAAVRAFD 297

Query: 648 RA----PKLEATHLEKAKELYT 665
           +A    P L   H+ +   L T
Sbjct: 298 QALRLRPDLPMAHMNRGVALLT 319



 Score = 42.0 bits (97), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 48/90 (53%), Gaps = 1/90 (1%)

Query: 140 AKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAI 199
           A G+ EQA + F+ VL       PAL G      + GR++++   ++RA+ + P+   A 
Sbjct: 217 ATGQHEQAVTEFEAVLAMQSSLPPALFGLGNALASLGRHAEARPRFERAVGLDPAFALAW 276

Query: 200 RLGIGLCRYKLGQLGKARQAFQRALQLDPE 229
            L +G   + LG    A +AF +AL+L P+
Sbjct: 277 -LSLGAAHHALGAHDAAVRAFDQALRLRPD 305


>gi|386002705|ref|YP_005921004.1| Tetratricopeptide TPR_2 [Methanosaeta harundinacea 6Ac]
 gi|357210761|gb|AET65381.1| Tetratricopeptide TPR_2 [Methanosaeta harundinacea 6Ac]
          Length = 660

 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 87/356 (24%), Positives = 152/356 (42%), Gaps = 28/356 (7%)

Query: 124 DMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLE 183
           D  + + W  +G +L   G  E+A  +F   L AD   + A   +     N GR  ++LE
Sbjct: 266 DPGDKAAWNDRGLILGVLGRYEEAVESFDAALRADPGYLLAWNNRGLALANLGRSEEALE 325

Query: 184 FYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQ 243
            Y R++ + PS   A     G   + L +  +A +A+  AL+++P       ALA  +  
Sbjct: 326 SYNRSIDIDPSFALAW-YNRGRALFDLERYDEAVEAYDSALEVEP-----AFALAWNNRG 379

Query: 244 ANEAAGIR--KGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETAL----AV 297
           A  AA  R  + +E   RA EI P   +A     +  +  G++F   +  + A+      
Sbjct: 380 AALAALGREEEALESYDRALEIDPGYEIAWYNRGSVLYLEGRYFDAIKAFDEAIRFNPTS 439

Query: 298 TNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGD 357
            +   +K H+ Y + R   +   YEKA         E++      + + G+    L    
Sbjct: 440 ADAWHSKGHALYQMRRPGEALVCYEKA--------LELDPGRAETWHHRGVALADLNRA- 490

Query: 358 FRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 417
              A   F++ LE+ P+        G +    G+ E+A     +AA++DP  A+A+ + G
Sbjct: 491 -AEAAEAFDRALELDPEYEPPWYRKGILAYSSGRPEEALAHFTRAAELDPGHAEAWNNRG 549

Query: 418 ELLIS-SDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFK 472
            +L +  DT  AL++   A        +    E  NN GV+    G+ E A +++ 
Sbjct: 550 WILFTLGDTDEALESIDRALE-----ADTALAEGWNNRGVVLTALGKNEEALEAYN 600



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 90/371 (24%), Positives = 147/371 (39%), Gaps = 30/371 (8%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
           A + Y  A  ID     +W G  +LL A G  E+A +     + AD  +  A   +  + 
Sbjct: 221 ALECYASALAIDSGLVGSWKGAAELLRALGRDEEALARLDGAVGADPGDKAAWNDRGLIL 280

Query: 173 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 232
              GRY +++E +  AL+  P    A     GL    LG+  +A +++ R++ +DP    
Sbjct: 281 GVLGRYEEAVESFDAALRADPGYLLAWN-NRGLALANLGRSEEALESYNRSIDIDPSFAL 339

Query: 233 ALV--ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQL 290
           A      A+ DL+  + A     +E    A E+ P  A+A N         G+     + 
Sbjct: 340 AWYNRGRALFDLERYDEA-----VEAYDSALEVEPAFALAWNNRGAALAALGREEEALES 394

Query: 291 TETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEF----IFPYY 346
            + AL +    P    ++YN     + +G        Y  ++K  ++   F       ++
Sbjct: 395 YDRALEID---PGYEIAWYNRGSVLYLEG-------RYFDAIKAFDEAIRFNPTSADAWH 444

Query: 347 GLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKID 406
             G    ++     AL  +EK LE+ P   ET    G     L +  +A E   +A ++D
Sbjct: 445 SKGHALYQMRRPGEALVCYEKALELDPGRAETWHHRGVALADLNRAAEAAEAFDRALELD 504

Query: 407 PRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEF 464
           P     +   G L  SS         + A     +A E  P   E  NN G I F  G+ 
Sbjct: 505 PEYEPPWYRKGILAYSSGR------PEEALAHFTRAAELDPGHAEAWNNRGWILFTLGDT 558

Query: 465 ESAHQSFKDAL 475
           + A +S   AL
Sbjct: 559 DEALESIDRAL 569



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 75/317 (23%), Positives = 124/317 (39%), Gaps = 52/317 (16%)

Query: 108 EHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLG 167
           E +  A + Y+ A  ++      W  +G  L A G  E+A  ++   LE D     A   
Sbjct: 352 ERYDEAVEAYDSALEVEPAFALAWNNRGAALAALGREEEALESYDRALEIDPGYEIAWYN 411

Query: 168 QACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLD 227
           +  V +  GRY D+++ +  A++ +P+   A     G   Y++ + G+A   +++AL+LD
Sbjct: 412 RGSVLYLEGRYFDAIKAFDEAIRFNPTSADAWH-SKGHALYQMRRPGEALVCYEKALELD 470

Query: 228 PENVEAL----VALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQ 283
           P   E      VALA ++ +A EAA      E   RA E+                    
Sbjct: 471 PGRAETWHHRGVALADLN-RAAEAA------EAFDRALEL-------------------- 503

Query: 284 HFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIF 343
                             P     +Y      +S G  E+A L +     E++  H    
Sbjct: 504 -----------------DPEYEPPWYRKGILAYSSGRPEEA-LAHFTRAAELDPGHAEA- 544

Query: 344 PYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAA 403
            +   G +   LGD   AL + ++ LE      E     G +   LG+ E+A E   +  
Sbjct: 545 -WNNRGWILFTLGDTDEALESIDRALEADTALAEGWNNRGVVLTALGKNEEALEAYNRTI 603

Query: 404 KIDPRDAQAFIDLGELL 420
            IDP   +A+ + G  L
Sbjct: 604 DIDPAHPRAWNNKGASL 620



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 54/116 (46%), Gaps = 1/116 (0%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
           A  ++ +A+ +D      W  +G +L   G+ ++A  +    LEAD         +  V 
Sbjct: 527 ALAHFTRAAELDPGHAEAWNNRGWILFTLGDTDEALESIDRALEADTALAEGWNNRGVVL 586

Query: 173 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDP 228
              G+  ++LE Y R + + P+ P A     G   Y LG+  +A   + RAL+LDP
Sbjct: 587 TALGKNEEALEAYNRTIDIDPAHPRAWN-NKGASLYHLGRYREAADCYGRALELDP 641



 Score = 48.1 bits (113), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 70/311 (22%), Positives = 122/311 (39%), Gaps = 14/311 (4%)

Query: 112 LATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACV 171
           +A + + +A  ID  +   W   G  L   G V++A  A+   L  D +N  A   +  +
Sbjct: 118 MAVEAFERALGIDPEDGVVWYELGNALSFLGRVDEALQAYNRSLTIDPENGKAWNNRGLI 177

Query: 172 EFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENV 231
               GRY ++   ++RA+   P    A +   G     LG+  +A + +  AL +D   V
Sbjct: 178 LGALGRYEEAASSFERAISSDPDLAAAWQ-NRGNALRALGRPEEALECYASALAIDSGLV 236

Query: 232 EALVALAVM--DLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQ 289
            +    A +   L  +E A     + ++  A    P    A N   +     G     E+
Sbjct: 237 GSWKGAAELLRALGRDEEA-----LARLDGAVGADPGDKAAWN---DRGLILGVLGRYEE 288

Query: 290 LTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLG 349
             E+  A     P    ++ N   +  + G  E+A   Y    + I+    F   +Y  G
Sbjct: 289 AVESFDAALRADPGYLLAWNNRGLALANLGRSEEALESYN---RSIDIDPSFALAWYNRG 345

Query: 350 QVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRD 409
           +    L  +  A+  ++  LE+ P         G     LG+ E+A E   +A +IDP  
Sbjct: 346 RALFDLERYDEAVEAYDSALEVEPAFALAWNNRGAALAALGREEEALESYDRALEIDPGY 405

Query: 410 AQAFIDLGELL 420
             A+ + G +L
Sbjct: 406 EIAWYNRGSVL 416



 Score = 44.7 bits (104), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 42/170 (24%), Positives = 68/170 (40%), Gaps = 8/170 (4%)

Query: 117 YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 176
           Y KA  +D     TW  +G  L       +A+ AF   LE D +  P    +  + ++ G
Sbjct: 463 YEKALELDPGRAETWHHRGVALADLNRAAEAAEAFDRALELDPEYEPPWYRKGILAYSSG 522

Query: 177 RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEAL-- 234
           R  ++L  + RA ++ P    A     G   + LG   +A ++  RAL+ D    E    
Sbjct: 523 RPEEALAHFTRAAELDPGHAEAWN-NRGWILFTLGDTDEALESIDRALEADTALAEGWNN 581

Query: 235 VALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQH 284
             + +  L  NE A     +E   R  +I P    A N      +  G++
Sbjct: 582 RGVVLTALGKNEEA-----LEAYNRTIDIDPAHPRAWNNKGASLYHLGRY 626



 Score = 42.7 bits (99), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 87/358 (24%), Positives = 140/358 (39%), Gaps = 25/358 (6%)

Query: 124 DMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPA--LLGQACVEFNRGRYSDS 181
           D      W+ + +    +G ++ A S+    L  D D   A  L G+  + +N      +
Sbjct: 61  DEESAEGWLEEAERYRQEGAIDLALSSLDRSLALDPDLAEAWVLRGEIAL-YNLTDREMA 119

Query: 182 LEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEAL--VALAV 239
           +E ++RAL + P   G +   +G     LG++ +A QA+ R+L +DPEN +A     L +
Sbjct: 120 VEAFERALGIDPE-DGVVWYELGNALSFLGRVDEALQAYNRSLTIDPENGKAWNNRGLIL 178

Query: 240 MDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTN 299
             L   E A         +RA    P  A A     N     G+     +   +ALA+ +
Sbjct: 179 GALGRYEEA-----ASSFERAISSDPDLAAAWQNRGNALRALGRPEEALECYASALAIDS 233

Query: 300 HGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFR 359
                  S+   A    + G  E+A L  +      +   +  +   GL  +   LG + 
Sbjct: 234 ---GLVGSWKGAAELLRALGRDEEA-LARLDGAVGADPGDKAAWNDRGL--ILGVLGRYE 287

Query: 360 SALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGEL 419
            A+ +F+  L   P         G     LG+ E+A E   ++  IDP  A A+ + G  
Sbjct: 288 EAVESFDAALRADPGYLLAWNNRGLALANLGRSEEALESYNRSIDIDPSFALAWYNRGRA 347

Query: 420 LISSDTGAALDAFKTARTLLKKAGEEVPIEVL--NNIGVIHFEKGEFESAHQSFKDAL 475
           L        L+ +  A      A E  P   L  NN G      G  E A +S+  AL
Sbjct: 348 LFD------LERYDEAVEAYDSALEVEPAFALAWNNRGAALAALGREEEALESYDRAL 399


>gi|113477836|ref|YP_723897.1| glycosyl transferase family protein [Trichodesmium erythraeum
           IMS101]
 gi|110168884|gb|ABG53424.1| glycosyl transferase, family 2 [Trichodesmium erythraeum IMS101]
          Length = 1061

 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 84/347 (24%), Positives = 149/347 (42%), Gaps = 27/347 (7%)

Query: 106 KEEHFILATQYYNKASRIDMHEPSTWVGK--GQLLLAKGEVEQASSAFKIVLEADRDNVP 163
           +E  F  A  YY KA  I+ +   TW  +  G+ L   G +E+A ++F+  +  D  +  
Sbjct: 14  REGKFESAIAYYQKA--IEENPQFTWSYQNLGEALEKTGRIEEAIASFRQAVAIDPQSHC 71

Query: 164 ALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRA 223
            L         +G++ +++ + +RA+ ++ + P    LG+G    KL Q  +A +   +A
Sbjct: 72  FLYKLGITLSRQGQFQEAVGYLRRAIDLNKNVP-EFYLGLGAALVKLRQWSEAVECIHQA 130

Query: 224 LQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRA-------FEIYPYCAMALNYLAN 276
           L++  E V  L   A+        A  + G E+   A       +EIYPY        A 
Sbjct: 131 LRVLDEKVGTLYERALQAEGYFYLAEAKSGQEQWSDAIKLYSQSWEIYPYRVNCCISWAV 190

Query: 277 HFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEIN 336
                G+      L   A+A +         Y+ L ++      +E+A + Y   +    
Sbjct: 191 ALGKLGRWSEAVALYRQAVAFSGE---SGEVYFGLGKALGQLKQWEEAVVEYRRGI---- 243

Query: 337 KPHEFIFP----YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQI 392
              +F F      + LG   L+L  +  A+  +  V+E+ P        LG+  +QL   
Sbjct: 244 ---DFGFDGAEVRHSLGYAFLQLKKWEEAIVEYRLVVEVDPKFAPVRHQLGYALMQLEHW 300

Query: 393 EKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTL 438
           E+A   LR+A ++ PR A  +  LG++L    + G A +A++ A  L
Sbjct: 301 EEAVIELRQAVELYPRSAIVWQQLGDVLWQLEEDGEAEEAYQKATEL 347


>gi|406982243|gb|EKE03586.1| hypothetical protein ACD_20C00180G0001, partial [uncultured
           bacterium]
          Length = 521

 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 85/167 (50%), Gaps = 4/167 (2%)

Query: 297 VTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLG 356
           V    P  +  YYNL  S   KG++EKA L +  SV+      +F   Y  LG +  K  
Sbjct: 66  VIQLNPDYAEGYYNLGNSLQEKGEFEKAQLCFQKSVE---LKSDFTEAYNNLGLILSKQL 122

Query: 357 DFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDL 416
            F  A+  ++K +++ PD C++   LG    + GQ E+A++   KA +I P  A+A+I+L
Sbjct: 123 QFDKAMEYYKKAIDLDPDYCDSYINLGSALNEKGQSEEARKYFHKALEIKPDFAEAYINL 182

Query: 417 GE-LLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKG 462
           G+   +S+D   + + ++ A  +  +  +      L N+   +F+KG
Sbjct: 183 GKSFYLSTDLEESEECYQKALLIKPEYADAYFGLALINLLKGNFDKG 229



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 61/246 (24%), Positives = 110/246 (44%), Gaps = 17/246 (6%)

Query: 132 VGKGQLLLAKGEVEQASSAFKIVL---EADRDNVPALLGQACVEFNRGRYSDSLEFYKRA 188
           +G   L LA   + Q  +A    L   E + D   A L    +   + R  DS+  +++ 
Sbjct: 7   LGYFNLALAYNSINQKDNAINCYLKTIEVNPDYFQAYLNLGILLAEKERLDDSIACFEKV 66

Query: 189 LQVHPS-CPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEA 247
           +Q++P    G   LG  L   + G+  KA+  FQ++++L  +  EA   L ++    ++ 
Sbjct: 67  IQLNPDYAEGYYNLGNSLQ--EKGEFEKAQLCFQKSVELKSDFTEAYNNLGLI---LSKQ 121

Query: 248 AGIRKGMEKMQRAFEIYP-YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSH 306
               K ME  ++A ++ P YC   +N L +     GQ     +    AL +    P  + 
Sbjct: 122 LQFDKAMEYYKKAIDLDPDYCDSYIN-LGSALNEKGQSEEARKYFHKALEIK---PDFAE 177

Query: 307 SYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFE 366
           +Y NL +S++   D E++   Y  ++  + KP E+   Y+GL  + L  G+F      +E
Sbjct: 178 AYINLGKSFYLSTDLEESEECYQKAL--LIKP-EYADAYFGLALINLLKGNFDKGWEYYE 234

Query: 367 KVLEIY 372
               +Y
Sbjct: 235 YRFSLY 240



 Score = 49.3 bits (116), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 83/171 (48%), Gaps = 11/171 (6%)

Query: 307 SYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFE 366
            Y+NLA +Y+S    + A   Y+ ++ E+N   ++   Y  LG +  +      ++  FE
Sbjct: 8   GYFNLALAYNSINQKDNAINCYLKTI-EVNP--DYFQAYLNLGILLAEKERLDDSIACFE 64

Query: 367 KVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTG 426
           KV+++ PD  E    LG+   + G+ EKAQ   +K+ ++     +A+ +LG L++S    
Sbjct: 65  KVIQLNPDYAEGYYNLGNSLQEKGEFEKAQLCFQKSVELKSDFTEAYNNLG-LILSKQL- 122

Query: 427 AALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDAL 475
                F  A    KKA +  P   +   N+G    EKG+ E A + F  AL
Sbjct: 123 ----QFDKAMEYYKKAIDLDPDYCDSYINLGSALNEKGQSEEARKYFHKAL 169


>gi|407784362|ref|ZP_11131519.1| TPR repeat-containing protein, partial [Oceanibaculum indicum P24]
 gi|407197053|gb|EKE67170.1| TPR repeat-containing protein, partial [Oceanibaculum indicum P24]
          Length = 382

 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 71/275 (25%), Positives = 118/275 (42%), Gaps = 27/275 (9%)

Query: 208 YKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYC 267
           ++ G+L +A   +++ L  D +  +AL  L  ++     A   + G+E ++RA  + P  
Sbjct: 34  HQQGKLAEAETLYRQILLQDQKQPDALHLLGQIERHKGNA---QAGLEMIERAIALRPES 90

Query: 268 AMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLY 327
           A       N     G+          AL +    P  + ++ NL       GD ++A  +
Sbjct: 91  APFRMTRGNTLRVMGKRAAAIAAYREALEIN---PDFADAHNNLGVILLEAGDAQEAADH 147

Query: 328 YMASVKEINKPHEFIFPYY-----GLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKAL 382
           +  +++        I P Y      LG     LGD   A+  F++ LE+ P+       L
Sbjct: 148 FRRALE--------IRPAYPDASNNLGNALKALGDIEGAIQRFKRTLEMAPNAVSAWTNL 199

Query: 383 GHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKA 442
           G +Y ++GQ +   E  RKA  I+P  A+A  +LG +L  +D G     +  AR  L+KA
Sbjct: 200 GSLYHKIGQWDSCTECYRKALSINPNSAEAHGNLGTIL--ADWG----RYDEARQHLEKA 253

Query: 443 GEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDAL 475
            E  P   E L ++G    E+G        F  AL
Sbjct: 254 IELRPNFPEALMSLGHALIEQGHGFEGEMRFLKAL 288



 Score = 46.6 bits (109), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 58/126 (46%), Gaps = 1/126 (0%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
           A  ++ +A  I    P      G  L A G++E A   FK  LE   + V A      + 
Sbjct: 144 AADHFRRALEIRPAYPDASNNLGNALKALGDIEGAIQRFKRTLEMAPNAVSAWTNLGSLY 203

Query: 173 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 232
              G++    E Y++AL ++P+   A    +G      G+  +ARQ  ++A++L P   E
Sbjct: 204 HKIGQWDSCTECYRKALSINPNSAEA-HGNLGTILADWGRYDEARQHLEKAIELRPNFPE 262

Query: 233 ALVALA 238
           AL++L 
Sbjct: 263 ALMSLG 268


>gi|118350326|ref|XP_001008444.1| TPR Domain containing protein [Tetrahymena thermophila]
 gi|89290211|gb|EAR88199.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
          Length = 550

 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 82/347 (23%), Positives = 139/347 (40%), Gaps = 76/347 (21%)

Query: 119 KASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRY 178
           KAS I   EP  +   GQL     + +QA   F+  +E D +N+ AL      +F     
Sbjct: 193 KASIIFPSEPEVFNKLGQLCQEMEDWQQAIGYFEKTIEIDPENINALFELGVTQFQIEEL 252

Query: 179 SDSL----------------------------------EFYKRALQVHPSCPGA--IRLG 202
            +++                                  E+ ++A+++ P    A  I  G
Sbjct: 253 DEAIHNFKKTLMIQPDHFNALFKLVEIYHSADLIEYAQEYLEQAIKIQPHNVKANLILAG 312

Query: 203 IGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQAN---EAAGIRKGMEKM-- 257
           I L +     + +A+Q  ++ +++D  N +AL  L ++  + N   +A  I K + ++  
Sbjct: 313 IYLAQ---KMILEAKQLCEQVIKVDSRNADALYYLGIIYQKENNIQKAISIFKEVTQINP 369

Query: 258 --------------------------QRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLT 291
                                     +R  ++ P    ALNYL+   +  G     E L 
Sbjct: 370 TKYIAQIQLGQLYHQQGKVEDAIISYKRILQVQPNNYFALNYLSFLLYELGDFNQAELLC 429

Query: 292 ETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQV 351
           + ALAV    P     Y+NL   Y  K  YE+A  +Y +++K      E    Y  LG +
Sbjct: 430 KKALAVD---PNAYEPYHNLGLIYQDKLLYEQAIKFYQSALKSNPDCAE---AYNNLGCI 483

Query: 352 QLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQEL 398
             + G+ + A+  FE+ ++  P   E  K L  IY  +G IEK+Q+L
Sbjct: 484 YYEKGNLKEAINQFEEAIKANPKFAEAHKNLSIIYENMGLIEKSQQL 530



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 104/465 (22%), Positives = 193/465 (41%), Gaps = 77/465 (16%)

Query: 175 RGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQL--DPENVE 232
           +G   +++  +++A++++P     ++  +G    ++ +L +A + F+++L    DP  + 
Sbjct: 79  KGFNQEAILCFQKAIELNPQL-NHLKQQLGYLCLEVDRLDEAIKYFEQSLGFSSDPYEIY 137

Query: 233 ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA-LNYLANHFFFTGQHFLVEQLT 291
            L+ +             R  M+  ++A E Y  C     NYL  +F     ++ + ++ 
Sbjct: 138 NLLGIIYE----------RNNMD--EKAEEYYKKCLQTNENYLGAYFNLAQVYYKLNKMQ 185

Query: 292 ETALAVTNHG---PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGL 348
              L +       P++   +  L +      D+++A  Y+  ++ EI+   E I   + L
Sbjct: 186 NAKLCLEKASIIFPSEPEVFNKLGQLCQEMEDWQQAIGYFEKTI-EIDP--ENINALFEL 242

Query: 349 GQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPR 408
           G  Q ++ +   A+ NF+K L I PD+   L  L  IY     IE AQE L +A KI P 
Sbjct: 243 GVTQFQIEELDEAIHNFKKTLMIQPDHFNALFKLVEIYHSADLIEYAQEYLEQAIKIQPH 302

Query: 409 DAQAFI----------------DLGELLISSDTGAALDAF-------------KTARTLL 439
           + +A +                 L E +I  D+  A DA              + A ++ 
Sbjct: 303 NVKANLILAGIYLAQKMILEAKQLCEQVIKVDSRNA-DALYYLGIIYQKENNIQKAISIF 361

Query: 440 KKAGEEVPIEVLNNI--GVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASA 497
           K+  +  P + +  I  G ++ ++G+ E A  S+K          +L  +   Y      
Sbjct: 362 KEVTQINPTKYIAQIQLGQLYHQQGKVEDAIISYK---------RILQVQPNNYFALNYL 412

Query: 498 SML-----QFKDMQLFHR--FENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRL 550
           S L      F   +L  +     D N  E P++ + +++    L EQ      A   Y+ 
Sbjct: 413 SFLLYELGDFNQAELLCKKALAVDPNAYE-PYHNLGLIYQDKLLYEQ------AIKFYQS 465

Query: 551 ILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNA 595
            L    D  +AY  L  I   + NL+ +I    EA+K N K+  A
Sbjct: 466 ALKSNPDCAEAYNNLGCIYYEKGNLKEAINQFEEAIKANPKFAEA 510



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 87/403 (21%), Positives = 171/403 (42%), Gaps = 48/403 (11%)

Query: 348 LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 407
           LG + L++     A+  FE+ L    D  E    LG IY +    EKA+E  +K  + + 
Sbjct: 106 LGYLCLEVDRLDEAIKYFEQSLGFSSDPYEIYNLLGIIYERNNMDEKAEEYYKKCLQTNE 165

Query: 408 RDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFE 465
               A+ +L ++         L+  + A+  L+KA    P   EV N +G +  E  +++
Sbjct: 166 NYLGAYFNLAQVYYK------LNKMQNAKLCLEKASIIFPSEPEVFNKLGQLCQEMEDWQ 219

Query: 466 SAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDM-QLFHRFEN----DGNHVEL 520
            A   F+  +        +D +    + +   +  Q +++ +  H F+       +H   
Sbjct: 220 QAIGYFEKTIE-------IDPENINALFELGVTQFQIEELDEAIHNFKKTLMIQPDHFNA 272

Query: 521 PWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDY-VDAYLRLAAIAKARNNLQLSI 579
            + K+  +++ A L+E   + +  ++       K Q + V A L LA I  A+  +  + 
Sbjct: 273 LF-KLVEIYHSADLIEYAQEYLEQAI-------KIQPHNVKANLILAGIYLAQKMILEAK 324

Query: 580 ELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNY 639
           +L  + +KV+ +  +AL  LG +  K ++  KA   F+  +     K   A + LG   +
Sbjct: 325 QLCEQVIKVDSRNADALYYLGIIYQKENNIQKAISIFKEVTQINPTK-YIAQIQLGQLYH 383

Query: 640 FAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFT 699
                        +   +E A   Y R++    +N +A N    +L E G F+ + +L  
Sbjct: 384 -------------QQGKVEDAIISYKRILQVQPNNYFALNYLSFLLYELGDFNQA-ELLC 429

Query: 700 QVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLR 742
           +   A   + +    + + NL  +Y  +  +  A+K YQ+ L+
Sbjct: 430 KKALAVDPNAY----EPYHNLGLIYQDKLLYEQAIKFYQSALK 468


>gi|427421824|ref|ZP_18912007.1| Tfp pilus assembly protein PilF [Leptolyngbya sp. PCC 7375]
 gi|425757701|gb|EKU98555.1| Tfp pilus assembly protein PilF [Leptolyngbya sp. PCC 7375]
          Length = 393

 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 70/305 (22%), Positives = 133/305 (43%), Gaps = 10/305 (3%)

Query: 101 TKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRD 160
            +Q    E++  A   Y +A  ID +    + G G L + KG+ + A  +++  ++ D  
Sbjct: 76  AQQNVDNENYSAAIAAYQEALAIDRNNARLYSGIGYLQILKGDYQLAVESYRQAIDRDSR 135

Query: 161 NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAF 220
           NV    G A   +   RY+++ + Y+   ++ PS   A  LG+G    +  +   A  A 
Sbjct: 136 NVSFRYGLAHGLYQAERYAEAADAYRTITRMAPSEANAY-LGLGNMLLRQNEYDLALNAL 194

Query: 221 QRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFF 280
           + A +L P N +   A+ ++ LQ          +E +QRA  I          LA  + +
Sbjct: 195 EEAARLAPNNAQVYEAIGLLYLQQER---FEDALEPLQRALRIDSNRGSIHGNLAKIWIY 251

Query: 281 TGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHE 340
            G+    E+    A++     P    S+Y LA     +GD   A +++  +V E N    
Sbjct: 252 QGRERQAEESLRRAISAN---PRDWESHYQLALIMQERGDNAAAFIHFEETV-EANP--S 305

Query: 341 FIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLR 400
           F+      G + L+   +  A+ ++ +++  +P++      LG      G+ E A + L+
Sbjct: 306 FVPAQAEFGSMLLEREQYIRAVISYRQIVRQFPEDAGARYNLGLALWGQGRREAAVDSLQ 365

Query: 401 KAAKI 405
           KA ++
Sbjct: 366 KARRL 370



 Score = 43.9 bits (102), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 42/77 (54%)

Query: 345 YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAK 404
           Y GLG + L+  ++  AL   E+   + P+N +  +A+G +Y+Q  + E A E L++A +
Sbjct: 174 YLGLGNMLLRQNEYDLALNALEEAARLAPNNAQVYEAIGLLYLQQERFEDALEPLQRALR 233

Query: 405 IDPRDAQAFIDLGELLI 421
           ID        +L ++ I
Sbjct: 234 IDSNRGSIHGNLAKIWI 250


>gi|435851441|ref|YP_007313027.1| putative endonuclease related to Holliday junction resolvase
           [Methanomethylovorans hollandica DSM 15978]
 gi|433662071|gb|AGB49497.1| putative endonuclease related to Holliday junction resolvase
           [Methanomethylovorans hollandica DSM 15978]
          Length = 913

 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 85/361 (23%), Positives = 151/361 (41%), Gaps = 62/361 (17%)

Query: 118 NKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGR 177
           NKA +ID    S W  KG  L   G  E+A  A+   +E +  +  A   +     + GR
Sbjct: 564 NKAIKIDQKSASAWNSKGFALTDAGRYEEAIQAYDKAIEINPRSDSAWDSKGWALRSLGR 623

Query: 178 YSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEAL--V 235
             ++++ Y +A++++P    +I    GL    LG+  +A QAF + +++D +   A    
Sbjct: 624 DEEAIQEYDKAIEINPRS-ASIWNSKGLALSSLGRDEEAIQAFDKVIEIDSKYPHAWDNK 682

Query: 236 ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETAL 295
            LA+  L  +E A     ++   +A EI P                              
Sbjct: 683 GLALSTLGRDEEA-----IQAYDKAIEIDP------------------------------ 707

Query: 296 AVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKL 355
                GP  S  +     +  S G YE+A   Y  ++ EIN     I+   G G     L
Sbjct: 708 --KFEGPWSSKGF-----ALSSLGRYEEAIQAYDKAI-EINPRSASIWS--GKGLALSIL 757

Query: 356 GDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFID 415
           G +  A+  ++KV+EI P +     + G     LG+ E+A +   KA +++P+   ++ +
Sbjct: 758 GRYEEAIQAYDKVIEINPRSDSAWDSKGLALSSLGRYEEAIQAFDKAIEVNPKSDISWAN 817

Query: 416 LGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHF-----EKGEFESAHQS 470
            G +L      ++L  ++ A     KA   + I+ ++ I  +       + G +E A Q+
Sbjct: 818 TGYVL------SSLGKYEEAMCAFDKA---IEIDSMSEIAWVRMGFALTDAGRYEEAIQA 868

Query: 471 F 471
           F
Sbjct: 869 F 869



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 71/297 (23%), Positives = 126/297 (42%), Gaps = 18/297 (6%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
           A Q Y+KA  I+    S W  KG  L + G  E+A  AF  V+E D     A   +    
Sbjct: 627 AIQEYDKAIEINPRSASIWNSKGLALSSLGRDEEAIQAFDKVIEIDSKYPHAWDNKGLAL 686

Query: 173 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 232
              GR  ++++ Y +A+++ P   G      G     LG+  +A QA+ +A++++P +  
Sbjct: 687 STLGRDEEAIQAYDKAIEIDPKFEGPWS-SKGFALSSLGRYEEAIQAYDKAIEINPRSAS 745

Query: 233 AL----VALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVE 288
                 +AL+++           K +E   R+   +    +AL+ L       G++    
Sbjct: 746 IWSGKGLALSILGRYEEAIQAYDKVIEINPRSDSAWDSKGLALSSL-------GRYEEAI 798

Query: 289 QLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGL 348
           Q  + A+ V    P    S+ N      S G YE+A   +  ++ EI+   E    +  +
Sbjct: 799 QAFDKAIEVN---PKSDISWANTGYVLSSLGKYEEAMCAFDKAI-EIDSMSE--IAWVRM 852

Query: 349 GQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKI 405
           G      G +  A+  F+ V+EI P +       G     LG+ E+A +   +A ++
Sbjct: 853 GFALTDAGRYEEAIQAFDVVIEINPKSSVIWHTKGFALRSLGREEEAIQAFDRAKEL 909



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 66/302 (21%), Positives = 126/302 (41%), Gaps = 18/302 (5%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
           A Q Y+KA  I+    S W  KG  L + G  E+A   +   +E +  +      +    
Sbjct: 593 AIQAYDKAIEINPRSDSAWDSKGWALRSLGRDEEAIQEYDKAIEINPRSASIWNSKGLAL 652

Query: 173 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDP--EN 230
            + GR  ++++ + + +++    P A     GL    LG+  +A QA+ +A+++DP  E 
Sbjct: 653 SSLGRDEEAIQAFDKVIEIDSKYPHAWD-NKGLALSTLGRDEEAIQAYDKAIEIDPKFEG 711

Query: 231 VEALVALAVMDLQANEAA--GIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVE 288
             +    A+  L   E A     K +E   R+  I+    +AL+ L  +          E
Sbjct: 712 PWSSKGFALSSLGRYEEAIQAYDKAIEINPRSASIWSGKGLALSILGRY----------E 761

Query: 289 QLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGL 348
           +  +    V    P    ++ +   +  S G YE+A   +  ++ E+N   +    +   
Sbjct: 762 EAIQAYDKVIEINPRSDSAWDSKGLALSSLGRYEEAIQAFDKAI-EVNPKSD--ISWANT 818

Query: 349 GQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPR 408
           G V   LG +  A+  F+K +EI   +      +G      G+ E+A +      +I+P+
Sbjct: 819 GYVLSSLGKYEEAMCAFDKAIEIDSMSEIAWVRMGFALTDAGRYEEAIQAFDVVIEINPK 878

Query: 409 DA 410
            +
Sbjct: 879 SS 880


>gi|425470514|ref|ZP_18849384.1| putative glycosyl transferase [Microcystis aeruginosa PCC 9701]
 gi|389883845|emb|CCI35807.1| putative glycosyl transferase [Microcystis aeruginosa PCC 9701]
          Length = 562

 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 77/299 (25%), Positives = 135/299 (45%), Gaps = 31/299 (10%)

Query: 134 KGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHP 193
           +G  LLA GE E A SA++ VL    ++V A +  A V  ++ RYS++L+ Y R   V+ 
Sbjct: 44  QGDQLLAAGEKESALSAYRTVLSFHENSVQAHIKIAQVLQSQKRYSEALQAYNRGFIVND 103

Query: 194 SCPGAIRLGIGLCRYKLGQL-------GKARQAFQRALQLDPE-NVEALVALAVMDLQA- 244
             P    L   L    LG +        +A  A+Q+A+ + P    +  +  A+  LQ  
Sbjct: 104 KPPMEPSLSNHLV--ALGDIFAQEEKWSEAIDAYQKAIMIKPTFKGQFQLGKALYSLQRW 161

Query: 245 NEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG--- 301
           +EAA      + +Q A  + P    A       +F+ G+ +  +QL + A          
Sbjct: 162 DEAA------KALQAAVFLDPSQGKA-------YFYLGKAYSEQQLWQEASYAYEQALEL 208

Query: 302 -PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRS 360
            P++   Y  L  +   +G +++A   Y  ++    K  +    Y  LG+   + G   +
Sbjct: 209 IPSQGEIYKKLGEALGKQGKWQQAEQIYRQALIYAPKDGDI---YNYLGKALAEQGKLGA 265

Query: 361 ALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGEL 419
           A+  F++  +I P N    + L + Y+  GQI++     R+A +IDP  ++A   L E+
Sbjct: 266 AMAVFQQARQISPKNANIYENLCYTYINSGQIDEGLNWCRQAVEIDPNLSEARFILQEI 324


>gi|294085101|ref|YP_003551861.1| hypothetical protein [Candidatus Puniceispirillum marinum IMCC1322]
 gi|292664676|gb|ADE39777.1| putative TPR repeat protein [Candidatus Puniceispirillum marinum
           IMCC1322]
          Length = 734

 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 76/286 (26%), Positives = 124/286 (43%), Gaps = 22/286 (7%)

Query: 157 ADRDNVPALLGQACVE-FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGK 215
           A +D+ PA   QA +  +N+G  + +    + ALQ  P     + L +G      G+L  
Sbjct: 7   AAKDDPPATQVQALIALYNQGEMAQTERQCRMALQEFPRSVTLLNL-LGAAFQTQGKLDF 65

Query: 216 ARQAFQRALQLDPENVE-----ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 270
           A  AF +A+ L+P++ +      +V LA+       A  ++        A ++ P    A
Sbjct: 66  AASAFVKAIALNPKDAQLHNNYGVVLLALSSFDTARACFLK--------ALKLTPDYVEA 117

Query: 271 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 330
            N L N     GQ          A+A+    PT   ++YN   +         A   Y  
Sbjct: 118 HNNLGNALRSLGQLDAALTRYNKAIAIQ---PTYGQAHYNRGVTLQQMQQMTAALASYED 174

Query: 331 SVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLG 390
           ++    +P EFI  +   G +  +LG    A+T++E  L I PD+ ET   +G IY   G
Sbjct: 175 ALAV--QP-EFIEAHINRGVIFQQLGKADDAITSYELALTIDPDHAETHNNMGIIYAGTG 231

Query: 391 QIEKAQELLRKAAKIDPRDAQAFIDLGELLI-SSDTGAALDAFKTA 435
             E+AQ    KA  + P   + +I+L  +L  +  T AA+   +TA
Sbjct: 232 DHERAQTYYEKALALKPDYVEGYINLATMLFETGHTAAAIAHLETA 277



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 83/371 (22%), Positives = 138/371 (37%), Gaps = 53/371 (14%)

Query: 83  IAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKG 142
           + +LN LG  +   GK++            A   + KA  ++  +       G +LLA  
Sbjct: 47  VTLLNLLGAAFQTQGKLD-----------FAASAFVKAIALNPKDAQLHNNYGVVLLALS 95

Query: 143 EVEQASSAFKIVLEADRDNVPAL--LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIR 200
             + A + F   L+   D V A   LG A      G+   +L  Y +A+ + P+  G   
Sbjct: 96  SFDTARACFLKALKLTPDYVEAHNNLGNALRSL--GQLDAALTRYNKAIAIQPTY-GQAH 152

Query: 201 LGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRA 260
              G+   ++ Q+  A  +++ AL + PE +EA +   V+  Q  +A      +   + A
Sbjct: 153 YNRGVTLQQMQQMTAALASYEDALAVQPEFIEAHINRGVIFQQLGKA---DDAITSYELA 209

Query: 261 FEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGD 320
             I P  A   N +   +  TG H   +   E ALA+    P     Y NLA      G 
Sbjct: 210 LTIDPDHAETHNNMGIIYAGTGDHERAQTYYEKALALK---PDYVEGYINLATMLFETGH 266

Query: 321 YEKA------GLYYMAS-------------------------VKEINKPHEFIFPYYGLG 349
              A       L Y A+                            I +  +F  P+   G
Sbjct: 267 TAAAIAHLETALGYDANDAMAHNLYGLLKKAQGDVVGALASYATAIAQNPDFAEPHINTG 326

Query: 350 QVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRD 409
               + G   SAL  F++ ++I PD+ E          +LG+ + A     +A  + P  
Sbjct: 327 LALQQSGAHASALAAFDRAIKINPDHAEAYNNKAVTLQELGRFDAALASYDQAITLAPDY 386

Query: 410 AQAFIDLGELL 420
           A A+ +   L+
Sbjct: 387 ALAYFNRSNLI 397



 Score = 41.2 bits (95), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 62/158 (39%), Gaps = 30/158 (18%)

Query: 349 GQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPR 408
           G V L L  F +A   F K L++ PD  E    LG+    LGQ++ A     KA  I P 
Sbjct: 88  GVVLLALSSFDTARACFLKALKLTPDYVEAHNNLGNALRSLGQLDAALTRYNKAIAIQPT 147

Query: 409 DAQAFIDLGELLIS-SDTGAALDAFKTARTL-----------------LKKAGEEVP--- 447
             QA  + G  L       AAL +++ A  +                 L KA + +    
Sbjct: 148 YGQAHYNRGVTLQQMQQMTAALASYEDALAVQPEFIEAHINRGVIFQQLGKADDAITSYE 207

Query: 448 ---------IEVLNNIGVIHFEKGEFESAHQSFKDALG 476
                     E  NN+G+I+   G+ E A   ++ AL 
Sbjct: 208 LALTIDPDHAETHNNMGIIYAGTGDHERAQTYYEKALA 245


>gi|427738890|ref|YP_007058434.1| hypothetical protein Riv7116_5517 [Rivularia sp. PCC 7116]
 gi|427373931|gb|AFY57887.1| TPR repeat-containing protein [Rivularia sp. PCC 7116]
          Length = 555

 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 76/300 (25%), Positives = 126/300 (42%), Gaps = 36/300 (12%)

Query: 167 GQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQL 226
           G  C  FN+  Y  ++E Y +AL++H S   +     G   Y L    +A   F +A+ +
Sbjct: 245 GDEC--FNKKLYDAAIENYSQALEIHKSDANSY-YKRGNAFYCLKNYSQAIADFTQAVNI 301

Query: 227 DPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQ--- 283
           +P   +A +      L   E A     +E   +A  I  Y A+A    A+     G    
Sbjct: 302 NPNFAKAYIKSG---LTRYELADYYGAIEDYTQAIRINSYDAVAFQNRADARSMIGDSQG 358

Query: 284 -------------HFLVEQLTETA-----LAVTNHGPTKSHSYYNLARSYHSKGDYEKAG 325
                        H L  Q  E+      +   +H  T  ++  NL R  H +       
Sbjct: 359 AIEDYTQAGKINPHLLETQRLESQQKNLNIEENSHNSTTDNNKDNLERENHQRA------ 412

Query: 326 LYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 385
           +     V EI+ P + +  Y   G  +  LGD+  A+ +F K + I P + +     G+ 
Sbjct: 413 IEVFTQVIEIS-PDDAV-GYKKRGNARCDLGDYLPAIEDFTKAIGINPYDGDAYFYRGNS 470

Query: 386 YVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGE 444
           + +LG   +A E   +A +I+P DA A+I+ G++     DT  A+  F+ A  L +KAG+
Sbjct: 471 FYELGNKPEAIEDYTQAIQINPNDADAYINRGKVRDELGDTQGAIADFQIAADLYQKAGK 530


>gi|307718491|ref|YP_003874023.1| hypothetical protein STHERM_c08010 [Spirochaeta thermophila DSM
           6192]
 gi|306532216|gb|ADN01750.1| TPR domain protein [Spirochaeta thermophila DSM 6192]
          Length = 382

 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 70/320 (21%), Positives = 136/320 (42%), Gaps = 17/320 (5%)

Query: 134 KGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHP 193
           +G  LL +   E+A   F+ +LE DR N  AL+G       +G +  ++ +Y+  L+ +P
Sbjct: 36  EGYALLKQDRPEEAIIRFEKILELDRHNNYALVGLGDAYRKKGEHDRAVSYYRECLRYYP 95

Query: 194 SCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKG 253
               A+  G+  C     +  +A + +++ L+ D  NV  L  +A       +    ++ 
Sbjct: 96  GNNYAL-FGLADCYKAQERYREAIEIWEKYLKYDETNVTVLTRVADA---YRKTGNFKRS 151

Query: 254 MEKMQRAFEI---YPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYN 310
            E   +  E+    PY  + L +L  H+ F      +      A+   +           
Sbjct: 152 KELYLKVLELDEGNPYALIGLGHL--HYDFKDYRTAISYWE--AILERDRDRVDIRVLTA 207

Query: 311 LARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLE 370
           +   +     YE+   Y++ ++++   PH F +  +GL      +GD R +L  +E++LE
Sbjct: 208 IGNCHRKLKQYERGIPYFLKALEK--DPHNF-YALFGLADCYRGVGDHRRSLQYWERILE 264

Query: 371 IYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALD 430
             P N   L   G  Y  LG + +A+E   +A  I   +  ++  LG  ++        +
Sbjct: 265 KDPHNKVILTRTGDAYRHLGDLARAEEYYHQALNI---EFDSYAILGLAMVHKARKEYRE 321

Query: 431 AFKTARTLLKKAGEEVPIEV 450
           A ++  T+L+   E   I +
Sbjct: 322 AAESLNTILRLDPENPKIYI 341



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 71/322 (22%), Positives = 125/322 (38%), Gaps = 49/322 (15%)

Query: 117 YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 176
           + K   +D H     VG G     KGE ++A S ++  L     N  AL G A     + 
Sbjct: 53  FEKILELDRHNNYALVGLGDAYRKKGEHDRAVSYYRECLRYYPGNNYALFGLADCYKAQE 112

Query: 177 RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVA 236
           RY +++E +++ L+   +    +       R K G   ++++ + + L+LD  N  AL+ 
Sbjct: 113 RYREAIEIWEKYLKYDETNVTVLTRVADAYR-KTGNFKRSKELYLKVLELDEGNPYALIG 171

Query: 237 LAVM-------------------------DLQANEAAG--------IRKGMEKMQRAFEI 263
           L  +                         D++   A G          +G+    +A E 
Sbjct: 172 LGHLHYDFKDYRTAISYWEAILERDRDRVDIRVLTAIGNCHRKLKQYERGIPYFLKALEK 231

Query: 264 YPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGP---TKSHSYYNLARSYHSKGD 320
            P+   AL  LA+ +   G H    Q  E  L    H     T++        +Y   GD
Sbjct: 232 DPHNFYALFGLADCYRGVGDHRRSLQYWERILEKDPHNKVILTRT------GDAYRHLGD 285

Query: 321 YEKAGLYYMASVK-EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 379
             +A  YY  ++  E +      +   GL  V     ++R A  +   +L + P+N +  
Sbjct: 286 LARAEEYYHQALNIEFDS-----YAILGLAMVHKARKEYREAAESLNTILRLDPENPKIY 340

Query: 380 KALGHIYVQLGQIEKAQELLRK 401
             L   Y+ L Q E+A+ +L++
Sbjct: 341 IELADCYLHLNQKEEARSVLKE 362



 Score = 42.0 bits (97), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 33/127 (25%), Positives = 58/127 (45%), Gaps = 3/127 (2%)

Query: 106 KEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPAL 165
           K  +F  + + Y K   +D   P   +G G L     +   A S ++ +LE DRD V   
Sbjct: 144 KTGNFKRSKELYLKVLELDEGNPYALIGLGHLHYDFKDYRTAISYWEAILERDRDRVDIR 203

Query: 166 LGQACVEFNR--GRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRA 223
           +  A    +R   +Y   + ++ +AL+  P    A+  G+  C   +G   ++ Q ++R 
Sbjct: 204 VLTAIGNCHRKLKQYERGIPYFLKALEKDPHNFYAL-FGLADCYRGVGDHRRSLQYWERI 262

Query: 224 LQLDPEN 230
           L+ DP N
Sbjct: 263 LEKDPHN 269


>gi|333998662|ref|YP_004531274.1| hypothetical protein TREPR_1725 [Treponema primitia ZAS-2]
 gi|333739778|gb|AEF85268.1| tetratricopeptide repeat protein [Treponema primitia ZAS-2]
          Length = 385

 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 81/356 (22%), Positives = 139/356 (39%), Gaps = 61/356 (17%)

Query: 124 DMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLE 183
           ++ E S    KG   L +  +  A  +F  +L  D +N  AL+G       RG + D++E
Sbjct: 29  EVSEISELSKKGYQFLKENRIADAIDSFGKILMVDENNNYALVGMGDATRKRGSFHDAVE 88

Query: 184 FYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA----- 238
           +Y+R L  HP    A+  G+  C   L Q  KA + +++ L  D +N+  L  +A     
Sbjct: 89  YYRRCLAHHPGKNYAL-FGLADCYKALNQYHKAIEIWEQYLLHDDKNITVLTRVADAYRK 147

Query: 239 VMDLQANEAAGIRK-GMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAV 297
           V D + ++   +R   ME+        PY  + L +L  H+ F                 
Sbjct: 148 VRDFKHSKEVYLRVLDMEEHN------PYAIIGLGHL--HYDFK---------------- 183

Query: 298 TNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGD 357
                                 +Y  A L+Y   + E NK    I     +G    KL  
Sbjct: 184 ----------------------EYRDA-LFYWEKMVEYNKEGVDIRVLTSIGNCHRKLKT 220

Query: 358 FRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 417
           F S +  FEK +   P N   L  L   Y  L Q  ++ +   +  + DPR+       G
Sbjct: 221 FESGIPYFEKAMHRDPGNFYALFGLADCYRGLNQQYRSLDYWNRILEQDPRNKVILTRAG 280

Query: 418 ELLIS-SDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFK 472
           +   + +D   A+D ++ A  +      E     +  + V+   +G++E + +S +
Sbjct: 281 DAYRNLNDFEKAVDYYRRALNI------EFDTYAVLGLSVVSKAQGKYEESIESLR 330



 Score = 39.7 bits (91), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 51/258 (19%), Positives = 100/258 (38%), Gaps = 47/258 (18%)

Query: 154 VLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHP-SCPGAIRLGIGLCRYKLGQ 212
           VL+ +  N  A++G   + ++   Y D+L ++++ ++ +       +   IG C  KL  
Sbjct: 161 VLDMEEHNPYAIIGLGHLHYDFKEYRDALFYWEKMVEYNKEGVDIRVLTSIGNCHRKLKT 220

Query: 213 LGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALN 272
                  F++A+  DP N  AL  LA             +G+ +  R+ + +        
Sbjct: 221 FESGIPYFEKAMHRDPGNFYALFGLA----------DCYRGLNQQYRSLDYW-------- 262

Query: 273 YLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASV 332
                      + ++EQ     + +T  G            +Y +  D+EKA  YY  ++
Sbjct: 263 -----------NRILEQDPRNKVILTRAGD-----------AYRNLNDFEKAVDYYRRAL 300

Query: 333 KEINKPHEF-IFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQ 391
                  EF  +   GL  V    G +  ++ +  ++++  P N      L   +V+ G 
Sbjct: 301 NI-----EFDTYAVLGLSVVSKAQGKYEESIESLRRLIQQDPKNYRLYVELADCWVKRGD 355

Query: 392 IEKAQELLRKAAKIDPRD 409
             +A E+L    K   R+
Sbjct: 356 RNQAIEILGAFQKFGIRN 373


>gi|326434263|gb|EGD79833.1| hypothetical protein PTSG_10816 [Salpingoeca sp. ATCC 50818]
          Length = 864

 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 95/369 (25%), Positives = 158/369 (42%), Gaps = 60/369 (16%)

Query: 268 AMALNYLANHFFFTGQHFLVEQLTETALAVTNHG-----PTKSHSYYNLARSYHSKGDYE 322
           A+  N +    F  G+     +L E  LA+         P  + S++NL + Y ++G+ +
Sbjct: 432 ALLCNRVGLVLFHFGERARATELYEKGLALEEQALGTYHPDTATSHHNLGQVYFTRGECK 491

Query: 323 KAGLYYMASVK-EINK-----PHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIY---- 372
           +A   Y  S+   +N      PH  I   + LG+   +LGD+ SA+ NFE  L++     
Sbjct: 492 RAIACYERSLHITLNTLGEKHPHTAIV-CHSLGEAYAELGDYHSAIGNFELCLQLTISTI 550

Query: 373 ----PDNCETLKALGHIYVQLGQIEKAQELLRKAAKID--------PRDAQAFIDLGELL 420
               P  C +L +LG IY ++G+  KA   L K  +I         P  A ++  LG+  
Sbjct: 551 GEKNPQVCASLHSLGRIYGKVGEYGKAVGYLEKDLEITLETVGEKHPSTAVSYSTLGQ-- 608

Query: 421 ISSDTG---AALDAFKTARTL-LKKAGEE--VPIEVLNNIGVIHFEKGEFESAHQSFKDA 474
           +  D G    A++ F  A  + L   GE+    +  LN++G  +  KGE E A     + 
Sbjct: 609 VYRDAGHYDKAIELFDKALQIKLDTVGEQNAETVRTLNDLGQAYNSKGEHERA----IEC 664

Query: 475 LGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNH-VELPWNKVTVLFNLAR 533
           L  G+ L L      T++ D    +    +  L   +   G H   L   + T+   LA 
Sbjct: 665 LEKGLALAL------TFMGDTHQDVASLYN-SLGLVYGAKGMHDAALEMYEKTLGIELAT 717

Query: 534 LLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYP 593
           L E+ H +V  S         Y +    Y R+  +A A+ NL  ++ +  E L  +  +P
Sbjct: 718 LGEE-HPSVGVS---------YHNIGHTYRRMGDLANAKKNLAHAVHIWMETLGPD--HP 765

Query: 594 NALSMLGDL 602
           +  + L  L
Sbjct: 766 HTRTGLNSL 774


>gi|186682271|ref|YP_001865467.1| hypothetical protein Npun_R1867 [Nostoc punctiforme PCC 73102]
 gi|186464723|gb|ACC80524.1| Tetratricopeptide TPR_2 repeat protein [Nostoc punctiforme PCC
           73102]
          Length = 409

 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 81/345 (23%), Positives = 152/345 (44%), Gaps = 22/345 (6%)

Query: 134 KGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHP 193
           +G  L  +G+ + A  AF+  +E + + V A +  A    ++G+  +++  YK+A+ + P
Sbjct: 55  EGSNLYKQGDFKGAEVAFRKAIELEPNFVQAYIALANTLDDQGKPQEAIAHYKKAISLDP 114

Query: 194 SCPGA-IRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA-VMDLQANEAAGIR 251
              GA   LG+ L R  L QL  A   +++AL L+P   +A   L   +  Q      + 
Sbjct: 115 HDSGAYFNLGLTLAR--LNQLEPAIAQYKKALSLEPNYADAHYNLGNALYTQGK----LT 168

Query: 252 KGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNL 311
           + + +   A  + P  A     L N  +  G+  L E +T+   +++   P  + ++Y L
Sbjct: 169 EAVTEYTAAIRLKPSYAPTYTRLGNALYDRGE--LAEAVTQYKKSIS-FDPKYADAHYYL 225

Query: 312 ARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEI 371
             + +++G   +A   Y A+++   K       Y  LG      G    A+  +++ L +
Sbjct: 226 GNALYAQGKSAEAIAEYTAAIRLSPKNPAG---YNALGNTLYAQGKLEEAIAQYKQALNL 282

Query: 372 YPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDA 431
            P+  +    L   +   G++ +A     +A +IDP+ AQA+  L   +   D G   +A
Sbjct: 283 EPNYADAHYNLASAFYAQGKLTEAITDYTEAIRIDPKHAQAYTGLANAM--DDQGKPQEA 340

Query: 432 FKTARTLLKKAGEEVPIEVLN--NIGVIHFEKGEFESAHQSFKDA 474
                   KKA   VP +     N+G+    + + E A  + K A
Sbjct: 341 IAH----YKKAISLVPNDAFTYYNLGITLGREQQLEEAIVNLKKA 381



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 70/295 (23%), Positives = 135/295 (45%), Gaps = 14/295 (4%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
           A  +Y KA  +D H+   +   G  L    ++E A + +K  L  + +   A        
Sbjct: 102 AIAHYKKAISLDPHDSGAYFNLGLTLARLNQLEPAIAQYKKALSLEPNYADAHYNLGNAL 161

Query: 173 FNRGRYSDSLEFYKRALQVHPS-CPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENV 231
           + +G+ ++++  Y  A+++ PS  P   RLG  L  Y  G+L +A   +++++  DP+  
Sbjct: 162 YTQGKLTEAVTEYTAAIRLKPSYAPTYTRLGNAL--YDRGELAEAVTQYKKSISFDPKYA 219

Query: 232 EALVALA-VMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQL 290
           +A   L   +  Q   A  I     +   A  + P      N L N  +  G+  L E +
Sbjct: 220 DAHYYLGNALYAQGKSAEAI----AEYTAAIRLSPKNPAGYNALGNTLYAQGK--LEEAI 273

Query: 291 TETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQ 350
            +   A+ N  P  + ++YNLA +++++G   +A   Y  +++ I+  H     Y GL  
Sbjct: 274 AQYKQAL-NLEPNYADAHYNLASAFYAQGKLTEAITDYTEAIR-IDPKHAQA--YTGLAN 329

Query: 351 VQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKI 405
                G  + A+ +++K + + P++  T   LG    +  Q+E+A   L+KA ++
Sbjct: 330 AMDDQGKPQEAIAHYKKAISLVPNDAFTYYNLGITLGREQQLEEAIVNLKKAKEL 384



 Score = 43.1 bits (100), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 65/273 (23%), Positives = 100/273 (36%), Gaps = 49/273 (17%)

Query: 204 GLCRYKLGQLGKARQAFQRALQLDPENVEALVALA-VMDLQANEAAGIRKGMEKMQRAFE 262
           G   YK G    A  AF++A++L+P  V+A +ALA  +D Q            K Q A  
Sbjct: 56  GSNLYKQGDFKGAEVAFRKAIELEPNFVQAYIALANTLDDQG-----------KPQEAIA 104

Query: 263 IYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYE 322
            Y   A++L+                             P  S +Y+NL  +       E
Sbjct: 105 HYK-KAISLD-----------------------------PHDSGAYFNLGLTLARLNQLE 134

Query: 323 KAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKAL 382
            A   Y    K ++    +   +Y LG      G    A+T +   + + P    T   L
Sbjct: 135 PAIAQYK---KALSLEPNYADAHYNLGNALYTQGKLTEAVTEYTAAIRLKPSYAPTYTRL 191

Query: 383 GHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKA 442
           G+     G++ +A    +K+   DP+ A A   LG  L +    A   A  TA   L   
Sbjct: 192 GNALYDRGELAEAVTQYKKSISFDPKYADAHYYLGNALYAQGKSAEAIAEYTAAIRLSPK 251

Query: 443 GEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
                    N +G   + +G+ E A   +K AL
Sbjct: 252 NP----AGYNALGNTLYAQGKLEEAIAQYKQAL 280


>gi|196006525|ref|XP_002113129.1| hypothetical protein TRIADDRAFT_56981 [Trichoplax adhaerens]
 gi|190585170|gb|EDV25239.1| hypothetical protein TRIADDRAFT_56981 [Trichoplax adhaerens]
          Length = 1643

 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 81/362 (22%), Positives = 153/362 (42%), Gaps = 68/362 (18%)

Query: 105 EKEEHFILATQYYNKA-----SRIDMHEPS---TWVGKGQLLLAKGEVEQASS----AFK 152
           + ++ F  A   +NK+     +++D + PS   T+   GQ+   +G+  +A S    + K
Sbjct: 153 DDQDKFDDALSVFNKSLKTQLTQLDENHPSIAITYSNIGQVYNDQGKYNKALSMLNKSLK 212

Query: 153 IVLEADRDNVPAL------LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 206
           I L    +N P++      +GQ  V  ++G+Y D+L  + ++L++  +  G   L I   
Sbjct: 213 ITLTKLSNNHPSIANTYNNIGQ--VYNHQGKYDDALSIHNKSLKITLTRLGDNHLIIANT 270

Query: 207 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAA---------GIRKGMEKM 257
              +GQ+   +  +  AL +        + + +  L+ N  +          +    +K 
Sbjct: 271 YRDIGQVYNNQGKYDDALSV----YNKSLKITLTKLEDNHPSIANTYDNIGQVYNNQDKY 326

Query: 258 QRAFEIY---------------PYCAMALNYLANHFFFTGQH-----FLVEQLTETALAV 297
             A  +Y               P  A+  N +   +   G++      L + L    + +
Sbjct: 327 DDALSVYYKSLKIKLTRLGDNHPSIAITYNNIGKVYSDQGKYDEALSMLNKSLKIRVIQL 386

Query: 298 TNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK------EINKPHEFIFPYYGLGQV 351
            ++ P+ + +Y N+AR Y+S+G Y+ A   Y  S+K        N P   I  Y G+G V
Sbjct: 387 GDNHPSITDTYNNIARVYNSQGKYDNALSTYNKSLKIQQAQLGDNHPSTAI-TYNGIGHV 445

Query: 352 QLKLGDFRSALTNFEKVLEI--------YPDNCETLKALGHIYVQLGQIEKAQELLRKAA 403
            + LG    AL  ++K L+I        +P+  ET   +G +    G  + A  +L K+ 
Sbjct: 446 YVNLGKHDDALLVYKKSLKIELAQLGENHPNTAETYNNIGQMNTYQGNYDNALLMLNKSL 505

Query: 404 KI 405
           KI
Sbjct: 506 KI 507



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 96/446 (21%), Positives = 183/446 (41%), Gaps = 80/446 (17%)

Query: 93   YTYLGKIETKQREKEEHFILATQYYNKASRI------DMHE--PSTWVGKGQLLLAKGEV 144
            Y  +GK+  +Q + ++    A   YNK+ +I      D H    +T+   GQ+   + + 
Sbjct: 1029 YNKIGKVYNRQGKYDD----ALSVYNKSLKITLTRLGDNHPNIANTYRDIGQVYNDQCKY 1084

Query: 145  EQASSAFKIVLEAD----RDNVPAL------LGQACVEFNRGRYSDSLEFYKRALQVHPS 194
            + A S +   L+ D     DN P++      +GQ  V   +G+Y D+L  Y ++L++  S
Sbjct: 1085 DDALSVYNKSLKIDLTKFDDNHPSIANTYDKIGQ--VYNKQGKYDDALSVYNKSLKIKLS 1142

Query: 195  CPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQA-----NEAAG 249
              G     I +    +GQ+   +  +  AL +  ++++  +     +  +     N+   
Sbjct: 1143 RHGDNHPSIAITYSNIGQIYNDQGKYNEALSVFNKSLKITIKQLGDNHPSIANTYNKIGK 1202

Query: 250  IRKGMEKMQRAFEIY------PYCAMALNY--LANHFFFTGQHFLVEQLTETALAVTN-- 299
            +     K   A  +Y             N+  +AN +   GQ +  +   + AL+V N  
Sbjct: 1203 VYNRQGKYDDALSVYNKSLKITLTRFGDNHPNIANTYGNIGQVYNDQCKYDDALSVYNKS 1262

Query: 300  ----------HGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK------EINKPHEFIF 343
                      + P+ +++Y  + + Y+ +G Y+ A   Y  S+K        N P     
Sbjct: 1263 LKIDLTKFDDNHPSIANTYDKIGQVYNKQGKYDDALSVYNKSLKIKLSRHGDNHP-SIAI 1321

Query: 344  PYYGLGQVQLKLGDFRSALTNFEKVLEI--------YPDNCETLKALGHIYVQLGQIEKA 395
             Y  +GQ+    G +  AL+ F K L+I        +P    T   +G +Y   G+ + A
Sbjct: 1322 TYRNIGQIYNDQGKYNEALSVFNKSLKITIKQLGDNHPSIANTYNKIGKVYNHQGKYDDA 1381

Query: 396  QELLRKAAKIDPRD--------AQAFIDLGELLISSDTGAALDAF----KTARTLLKKAG 443
              +  K+ KI            A  + D+G+  + ++ G   DA     K+ +  L K G
Sbjct: 1382 LSIHNKSLKITLTRLGDNHLIIANTYRDIGQ--VYNNQGKYDDALSVFIKSLKITLTKLG 1439

Query: 444  EEVP--IEVLNNIGVIHFEKGEFESA 467
            +  P      +NIG ++  + E++ A
Sbjct: 1440 DNHPSIANTYDNIGQVYNRQDEYDDA 1465



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 96/454 (21%), Positives = 188/454 (41%), Gaps = 80/454 (17%)

Query: 93   YTYLGKIETKQREKEEHFILATQYYNKASRI------DMHE--PSTWVGKGQLLLAKGEV 144
            Y  +GK+  +Q + ++    A   YNK+ +I      D H    +T+   GQ+   + + 
Sbjct: 861  YNNIGKVYNRQGKYDD----ALSMYNKSLKITLTRFGDNHPNIANTYGNIGQVYNDQCKY 916

Query: 145  EQASSAF----KIVLEADRDNVPAL------LGQACVEFNRGRYSDSLEFYKRALQVHPS 194
            + A S F    KI L    DN P++      +GQ  V   +G+Y D+L  Y ++L++  S
Sbjct: 917  DDALSVFNKSLKITLTKLGDNHPSIANIYDKIGQ--VYNKQGKYDDALSVYNKSLKIKLS 974

Query: 195  CPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQA-----NEAAG 249
              G     + +    +GQ+   +  +  AL +  ++++  +     +  +     N+   
Sbjct: 975  RHGDNHPSVAITYSSIGQVYNDQGKYDEALSMFNKSLKITIKQLGDNHPSIANTYNKIGK 1034

Query: 250  IRKGMEKMQRAFEIY------PYCAMALNY--LANHFFFTGQHFLVEQLTETALAVTN-- 299
            +     K   A  +Y          +  N+  +AN +   GQ +  +   + AL+V N  
Sbjct: 1035 VYNRQGKYDDALSVYNKSLKITLTRLGDNHPNIANTYRDIGQVYNDQCKYDDALSVYNKS 1094

Query: 300  ----------HGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK------EINKPHEFIF 343
                      + P+ +++Y  + + Y+ +G Y+ A   Y  S+K        N P     
Sbjct: 1095 LKIDLTKFDDNHPSIANTYDKIGQVYNKQGKYDDALSVYNKSLKIKLSRHGDNHP-SIAI 1153

Query: 344  PYYGLGQVQLKLGDFRSALTNFEKVLEI--------YPDNCETLKALGHIYVQLGQIEKA 395
             Y  +GQ+    G +  AL+ F K L+I        +P    T   +G +Y + G+ + A
Sbjct: 1154 TYSNIGQIYNDQGKYNEALSVFNKSLKITIKQLGDNHPSIANTYNKIGKVYNRQGKYDDA 1213

Query: 396  QELLRKAAKID--------PRDAQAFIDLGELLISSDTGAALDAF----KTARTLLKKAG 443
              +  K+ KI         P  A  + ++G+  + +D     DA     K+ +  L K  
Sbjct: 1214 LSVYNKSLKITLTRFGDNHPNIANTYGNIGQ--VYNDQCKYDDALSVYNKSLKIDLTKFD 1271

Query: 444  EEVP--IEVLNNIGVIHFEKGEFESAHQSFKDAL 475
            +  P      + IG ++ ++G+++ A   +  +L
Sbjct: 1272 DNHPSIANTYDKIGQVYNKQGKYDDALSVYNKSL 1305



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 86/382 (22%), Positives = 153/382 (40%), Gaps = 84/382 (21%)

Query: 150  AFKIVLEADRDNVPAL------LGQACVEFNRGRYSDSLEFYKRALQV--------HPSC 195
            + K  L    DN P        +GQ  V  N+G+Y D+L  Y ++L++        HPS 
Sbjct: 716  SLKFTLTRLGDNHPRTAAIYKDIGQ--VYNNQGKYDDALSVYNKSLKIILTKFDDNHPSI 773

Query: 196  PGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGME 255
                 + IG    K G+   A   + ++L++                             
Sbjct: 774  ASTYDI-IGRVYNKQGKYDDALSVYNKSLKI----------------------------- 803

Query: 256  KMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVT------NHGPTKSHSYY 309
            K+ R  +  P  A+  + +   +   G++     +   +L +T      NH P+ +++Y 
Sbjct: 804  KLTRLGDNLPSIAITYSSIGQVYNDQGKYDEALSMFNKSLKITLKQLGDNH-PSITNTYN 862

Query: 310  NLARSYHSKGDYEKAGLYYMASVK----EINKPHEFIFPYYG-LGQVQLKLGDFRSALTN 364
            N+ + Y+ +G Y+ A   Y  S+K         H  I   YG +GQV      +  AL+ 
Sbjct: 863  NIGKVYNRQGKYDDALSMYNKSLKITLTRFGDNHPNIANTYGNIGQVYNDQCKYDDALSV 922

Query: 365  FEKVLEI--------YPDNCETLKALGHIYVQLGQIEKAQELLRKAAKID--------PR 408
            F K L+I        +P        +G +Y + G+ + A  +  K+ KI         P 
Sbjct: 923  FNKSLKITLTKLGDNHPSIANIYDKIGQVYNKQGKYDDALSVYNKSLKIKLSRHGDNHPS 982

Query: 409  DAQAFIDLGELLISSDTGA---ALDAF-KTARTLLKKAGEEVP--IEVLNNIGVIHFEKG 462
             A  +  +G+  + +D G    AL  F K+ +  +K+ G+  P      N IG ++  +G
Sbjct: 983  VAITYSSIGQ--VYNDQGKYDEALSMFNKSLKITIKQLGDNHPSIANTYNKIGKVYNRQG 1040

Query: 463  EFESAHQSFKDALGDGIWLTLL 484
            +++ A   +  +L   I LT L
Sbjct: 1041 KYDDALSVYNKSL--KITLTRL 1060



 Score = 47.4 bits (111), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 50/218 (22%), Positives = 97/218 (44%), Gaps = 29/218 (13%)

Query: 285 FLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK----EINKPHE 340
            L + L  T   ++N+ P+ +++Y N+ + Y+ +G Y+ A   +  S+K     +   H 
Sbjct: 206 MLNKSLKITLTKLSNNHPSIANTYNNIGQVYNHQGKYDDALSIHNKSLKITLTRLGDNHL 265

Query: 341 FI-FPYYGLGQVQLKLGDFRSALTNFEKVLEI--------YPDNCETLKALGHIYVQLGQ 391
            I   Y  +GQV    G +  AL+ + K L+I        +P    T   +G +Y    +
Sbjct: 266 IIANTYRDIGQVYNNQGKYDDALSVYNKSLKITLTKLEDNHPSIANTYDNIGQVYNNQDK 325

Query: 392 IEKAQELLRKAAKID--------PRDAQAFIDLGELLISSDTGAALDAFKTARTLLK--- 440
            + A  +  K+ KI         P  A  + ++G+  + SD G   +A       LK   
Sbjct: 326 YDDALSVYYKSLKIKLTRLGDNHPSIAITYNNIGK--VYSDQGKYDEALSMLNKSLKIRV 383

Query: 441 -KAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDAL 475
            + G+  P   +  NNI  ++  +G++++A  ++  +L
Sbjct: 384 IQLGDNHPSITDTYNNIARVYNSQGKYDNALSTYNKSL 421



 Score = 47.0 bits (110), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 75/322 (23%), Positives = 132/322 (40%), Gaps = 61/322 (18%)

Query: 119 KASRIDMHEPS---TWVGKGQLLLAKGEVEQASS----AFKIVLEADRDNVPALLGQ--- 168
           K +R+  + PS   T+   G++   +G+ ++A S    + KI +    DN P++      
Sbjct: 340 KLTRLGDNHPSIAITYNNIGKVYSDQGKYDEALSMLNKSLKIRVIQLGDNHPSITDTYNN 399

Query: 169 -ACVEFNRGRYSDSLEFYKRALQV--------HPSCPGAIRLGIGLCRYKLGQLGKARQA 219
            A V  ++G+Y ++L  Y ++L++        HPS       GIG     LG+   A   
Sbjct: 400 IARVYNSQGKYDNALSTYNKSLKIQQAQLGDNHPSTAITYN-GIGHVYVNLGKHDDALLV 458

Query: 220 FQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALN-YLANHF 278
           ++++L+++         LA +       A     + +M      Y    + LN  L  H 
Sbjct: 459 YKKSLKIE---------LAQLGENHPNTAETYNNIGQMNTYQGNYDNALLMLNKSLKIHL 509

Query: 279 FFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEI--- 335
              G         +  L +TN       +Y+N+A  Y  +G Y+ A      S+K I   
Sbjct: 510 TRYG---------DNHLGITN-------TYHNIASVYRRQGKYDDAQSICNKSLKMILTK 553

Query: 336 ---NKPHEFIFPYY-GLGQVQLKLGDFRSALTNFEKVLEI--------YPDNCETLKALG 383
              N  H  I   Y  +G+V    G +  A++   K ++I        +P   +T   LG
Sbjct: 554 FGDNCNHPRIARIYRHIGKVYTDQGKYDDAISMISKSIKIDLTKLGDNHPIIAKTYGELG 613

Query: 384 HIYVQLGQIEKAQELLRKAAKI 405
           H+Y   G+ + A  +  K+ KI
Sbjct: 614 HVYKNQGKYDDALSVYYKSLKI 635



 Score = 46.6 bits (109), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 50/194 (25%), Positives = 91/194 (46%), Gaps = 26/194 (13%)

Query: 299 NHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK----EINKPHEFI-FPYYGLGQVQL 353
           NH P+ + +Y N+ + Y+ +G Y KA      S+K    +++  H  I   Y  +GQV  
Sbjct: 179 NH-PSIAITYSNIGQVYNDQGKYNKALSMLNKSLKITLTKLSNNHPSIANTYNNIGQVYN 237

Query: 354 KLGDFRSALTNFEKVLEI----YPDN----CETLKALGHIYVQLGQIEKAQELLRKAAKI 405
             G +  AL+   K L+I      DN      T + +G +Y   G+ + A  +  K+ KI
Sbjct: 238 HQGKYDDALSIHNKSLKITLTRLGDNHLIIANTYRDIGQVYNNQGKYDDALSVYNKSLKI 297

Query: 406 D--------PRDAQAFIDLGELLISSDT-GAALDA-FKTARTLLKKAGEEVPIEVL--NN 453
                    P  A  + ++G++  + D    AL   +K+ +  L + G+  P   +  NN
Sbjct: 298 TLTKLEDNHPSIANTYDNIGQVYNNQDKYDDALSVYYKSLKIKLTRLGDNHPSIAITYNN 357

Query: 454 IGVIHFEKGEFESA 467
           IG ++ ++G+++ A
Sbjct: 358 IGKVYSDQGKYDEA 371


>gi|154707419|ref|YP_001424860.1| tetratricopeptide repeat family protein [Coxiella burnetii Dugway
           5J108-111]
 gi|154356705|gb|ABS78167.1| tetratricopeptide repeat family protein [Coxiella burnetii Dugway
           5J108-111]
          Length = 561

 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 81/318 (25%), Positives = 141/318 (44%), Gaps = 29/318 (9%)

Query: 165 LLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRAL 224
           LL +A  +  +G   ++LE Y + L+  P    A+  G G+   +LG+  +A     RAL
Sbjct: 5   LLERAIQQHQQGSLKNALENYHKVLEDDPKQTAALH-GAGIALSQLGRNDEALHYIDRAL 63

Query: 225 QLDPENVEALVALAVMDLQANEAAGIRKGMEKM---QRAFEIYPYCAMALNYLANHFFFT 281
            L+P+N          + + N  +   K +E      +A ++ P  A A N +AN FF  
Sbjct: 64  LLEPQNA------TFQNSRGNILSQHGKLVEATIAYDQAIQLQPDYATAYNNIANCFFRQ 117

Query: 282 GQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKE---INKP 338
            +    ++  + A+A+    P  +++++N AR      +Y +A    +A +K    ++  
Sbjct: 118 KKFDNAKKAYQKAIALK---PHFANAHFNYARLLIELENYHQA----IAELKRTVAMSSH 170

Query: 339 HEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQEL 398
           H   F    L  V + LGDF  A+T +EK L + P+N +     G  +++  Q +KA + 
Sbjct: 171 HSAAFS--QLAHVYMYLGDFSKAITYYEKRLALEPENADAQYDCGLAHLKDNQFQKAIDH 228

Query: 399 LRKAAKIDPRDAQAFIDLGE-LLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVI 457
              A  ++P        L    L   D   AL  +      L++  ++  IE   N+GV+
Sbjct: 229 FTNALLLNPEHPDCHYSLATAYLQRGDHKEALLHY------LRQLEKKPQIECYYNVGVL 282

Query: 458 HFEKGEFESAHQSFKDAL 475
           H  +     A   FK AL
Sbjct: 283 HMYQERHREAIDYFKQAL 300



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 76/301 (25%), Positives = 129/301 (42%), Gaps = 16/301 (5%)

Query: 141 KGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIR 200
           +G ++ A   +  VLE D     AL G        GR  ++L +  RAL + P      +
Sbjct: 15  QGSLKNALENYHKVLEDDPKQTAALHGAGIALSQLGRNDEALHYIDRALLLEPQ-NATFQ 73

Query: 201 LGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRA 260
              G    + G+L +A  A+ +A+QL P+   A   +A    +  +    +K     Q+A
Sbjct: 74  NSRGNILSQHGKLVEATIAYDQAIQLQPDYATAYNNIANCFFRQKKFDNAKKA---YQKA 130

Query: 261 FEIYPYCAMA-LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 319
             + P+ A A  NY          H  + +L  T    ++H    S ++  LA  Y   G
Sbjct: 131 IALKPHFANAHFNYARLLIELENYHQAIAELKRTVAMSSHH----SAAFSQLAHVYMYLG 186

Query: 320 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 379
           D+ KA  YY    K +    E     Y  G   LK   F+ A+ +F   L + P++ +  
Sbjct: 187 DFSKAITYYE---KRLALEPENADAQYDCGLAHLKDNQFQKAIDHFTNALLLNPEHPDCH 243

Query: 380 KALGHIYVQLGQIEKAQELLRKAAKIDPR-DAQAFIDLGELLISSDTG-AALDAFKTART 437
            +L   Y+Q G  ++A  LL    +++ +   + + ++G L +  +    A+D FK A T
Sbjct: 244 YSLATAYLQRGDHKEA--LLHYLRQLEKKPQIECYYNVGVLHMYQERHREAIDYFKQALT 301

Query: 438 L 438
           L
Sbjct: 302 L 302



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 66/330 (20%), Positives = 134/330 (40%), Gaps = 39/330 (11%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
           A + Y+K    D  + +   G G  L   G  ++A       L  +  N      +  + 
Sbjct: 21  ALENYHKVLEDDPKQTAALHGAGIALSQLGRNDEALHYIDRALLLEPQNATFQNSRGNIL 80

Query: 173 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 232
              G+  ++   Y +A+Q+ P    A    I  C ++  +   A++A+Q+A+ L P    
Sbjct: 81  SQHGKLVEATIAYDQAIQLQPDYATAYN-NIANCFFRQKKFDNAKKAYQKAIALKPHFAN 139

Query: 233 ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQ--------- 283
           A    A + +   E     + + +++R   +  + + A + LA+ + + G          
Sbjct: 140 AHFNYARLLI---ELENYHQAIAELKRTVAMSSHHSAAFSQLAHVYMYLGDFSKAITYYE 196

Query: 284 -------------------HFLVEQLTETALAVTNH---GPTKSHSYYNLARSYHSKGDY 321
                              H    Q  +     TN     P     +Y+LA +Y  +GD+
Sbjct: 197 KRLALEPENADAQYDCGLAHLKDNQFQKAIDHFTNALLLNPEHPDCHYSLATAYLQRGDH 256

Query: 322 EKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKA 381
           ++A L+Y+  +++  KP   I  YY +G + +     R A+  F++ L + P+  E    
Sbjct: 257 KEALLHYLRQLEK--KPQ--IECYYNVGVLHMYQERHREAIDYFKQALTLDPNYREAHLN 312

Query: 382 LGHIYVQLGQIEKAQELLRKAAKIDPRDAQ 411
           +  +Y+++ QI++A E       + P D++
Sbjct: 313 IAAVYLKINQIKQAIEHYESTLVLKPNDSE 342


>gi|189527635|ref|XP_001921570.1| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit isoform
           2 [Danio rerio]
          Length = 1045

 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 103/480 (21%), Positives = 187/480 (38%), Gaps = 29/480 (6%)

Query: 141 KGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIR 200
            G+ E A      +   + DN   LL  + + F   R   S +F   A + +P    A  
Sbjct: 33  SGDFEAAEHHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDMSFQFSTLATKQNPMLAEAYS 92

Query: 201 LGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRA 260
             +G    + GQL +A + +++AL+L P+ ++  + LA   + A +  G    ++    A
Sbjct: 93  -NLGNVHKERGQLQEAIERYRQALRLKPDFIDGYINLAAALVAAGDMEG---AVQAYVSA 148

Query: 261 FEIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSK 318
               P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++
Sbjct: 149 LHCNPDLYCVRS--DLGNLLKALGR---LEEAKRCYLKAIETQPNFAVAWSNLGCVFNAQ 203

Query: 319 GDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCET 378
           G+   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++   
Sbjct: 204 GEIWLAIHHFE---KAVTLDASFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVV 260

Query: 379 LKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLI-SSDTGAALDAFKTART 437
              L  +Y + G I+ A +  R A ++ P    A+ +L   +    +   A + + TA  
Sbjct: 261 HGNLACVYYEQGLIDLAIDTYRHAIELQPHFPDAYCNLANAMKEKCNVSEAEECYNTALR 320

Query: 438 LLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASA 497
           L     +      LNN+  I  E+G  E A Q ++ AL       +       +   AS 
Sbjct: 321 LCPTHADS-----LNNLANIKREQGNIEEAVQLYRKAL------EVFPDFAAAHSNLASV 369

Query: 498 SMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQD 557
              Q K  +    +E     + +         N+   L+++ D   A   Y   +     
Sbjct: 370 LQQQGKLQEALMHYEEA---IRISPTFADAYSNMGNTLKEMQDIQGALRCYTRAIQINPA 426

Query: 558 YVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFR 617
           + DA+  LA+I K   N+  +I     ALK+   +P+A   L        DW    E  +
Sbjct: 427 FADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMK 486



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 86/391 (21%), Positives = 162/391 (41%), Gaps = 34/391 (8%)

Query: 93  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 152
           Y+ LG +  ++ + +E    A + Y +A R+       ++     L+A G++E A  A+ 
Sbjct: 91  YSNLGNVHKERGQLQE----AIERYRQALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 146

Query: 153 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 210
             L  + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 147 SALHCNPDLYCVRSDLGNLLKAL--GRLEEAKRCYLKAIETQPNFAVAWS-NLGCVFNAQ 203

Query: 211 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 270
           G++  A   F++A+ LD   ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 204 GEIWLAIHHFEKAVTLDASFLDAYINLGNV---LKEARIFDRAVAAYLRALSLSPNHAVV 260

Query: 271 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 330
              LA  ++  G   L       A+ +  H P    +Y NLA +   K +  +A   Y  
Sbjct: 261 HGNLACVYYEQGLIDLAIDTYRHAIELQPHFPD---AYCNLANAMKEKCNVSEAEECYNT 317

Query: 331 SVKEINKPHEFIFPYYG-----LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 385
           +++        + P +      L  ++ + G+   A+  + K LE++PD       L  +
Sbjct: 318 ALR--------LCPTHADSLNNLANIKREQGNIEEAVQLYRKALEVFPDFAAAHSNLASV 369

Query: 386 YVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGE 444
             Q G++++A     +A +I P  A A+ ++G  L    D   AL  +  A  +      
Sbjct: 370 LQQQGKLQEALMHYEEAIRISPTFADAYSNMGNTLKEMQDIQGALRCYTRAIQINPAFA- 428

Query: 445 EVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
               +  +N+  IH + G    A  S++ AL
Sbjct: 429 ----DAHSNLASIHKDSGNIPEAIASYRTAL 455


>gi|432851225|ref|XP_004066917.1| PREDICTED: Bardet-Biedl syndrome 4 protein-like [Oryzias latipes]
          Length = 517

 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 62/226 (27%), Positives = 106/226 (46%), Gaps = 13/226 (5%)

Query: 250 IRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYY 309
           I++ +E +Q    + P     L  +A   F  G+H    ++   A  + +     SH   
Sbjct: 81  IQESLELLQSCAILNPSSTDNLKQVARSLFLLGKHKAAIEVYHEAARLCDKDWEISH--- 137

Query: 310 NLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVL 369
           NL   +    D++ A   ++ +  +INK H+  F    LG+V L  G+   A+  F++ +
Sbjct: 138 NLGVCFFFIKDFKNAE-EHLNTALQINK-HDKTF--MMLGKVHLVAGETDKAIEVFKRAV 193

Query: 370 EIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL-ISSDTGAA 428
           E  P+N E L  LG +Y+QL + +KA E L  A   DP + +A +  G ++    D   A
Sbjct: 194 EFSPENTEHLSTLGLLYLQLRKYQKAFEHLGNALTFDPNNYKAILAAGSMMQTHGDFDVA 253

Query: 429 LDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDA 474
           ++ ++ A      A  E P  + NNIG+  F K ++ +A    K A
Sbjct: 254 MNKYRVAAC----AVPESP-PLWNNIGMCFFGKKKYVAAISCLKRA 294



 Score = 45.1 bits (105), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 65/293 (22%), Positives = 121/293 (41%), Gaps = 37/293 (12%)

Query: 580 ELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF-RAASDATDGKDSYATLSLGNWN 638
           E +N AL++N K+     MLG + L   +  KA E F RA   + +  +  +TL L    
Sbjct: 154 EHLNTALQIN-KHDKTFMMLGKVHLVAGETDKAIEVFKRAVEFSPENTEHLSTLGL---- 208

Query: 639 YFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLF 698
            +  LR             +KA E     +    +N  A   AG ++   G FDV+ + +
Sbjct: 209 LYLQLRK-----------YQKAFEHLGNALTFDPNNYKAILAAGSMMQTHGDFDVAMNKY 257

Query: 699 TQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNT--DAQILLYL 756
                  +     + P +W N+   +F +  +  A+    +CL++  Y +  D ++L  L
Sbjct: 258 R-----VAACAVPESPPLWNNIGMCFFGKKKYVAAI----SCLKRANYLSPFDWKVLYNL 308

Query: 757 ARTHYEAEQWQDCKKSLLRAIHLAPSN---YTLRFDAGVAMQKFSASTLQKTRRTADEVR 813
              H   +Q+      L  AI L P     Y L   A   ++    ST    +    +  
Sbjct: 309 GLVHLTMQQYASAFHFLSAAISLNPRMGELYMLLAVALTNLEDVENSTRAYEQAVNLDES 368

Query: 814 STVAELENAVRVFSHLSAASNLHLHGFDEKKIN------THVEYCKHLLDAAK 860
           + +  L  A+ +++H    + L  +   ++K+N      +++E+   L+D A+
Sbjct: 369 NPLVNLNFAIFLYNHGDKTAALDQYQEMQRKVNILQDSSSNLEFDPELMDMAQ 421



 Score = 40.8 bits (94), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 52/245 (21%), Positives = 90/245 (36%), Gaps = 52/245 (21%)

Query: 211 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 270
           G+  KA + F+RA++  PEN E L  L ++ LQ          + K Q+AFE        
Sbjct: 180 GETDKAIEVFKRAVEFSPENTEHLSTLGLLYLQ----------LRKYQKAFE-------- 221

Query: 271 LNYLANHFFFTGQHFLVEQLTETALAVTNHG----------------PTKSHSYYNLARS 314
             +L N   F   ++  + +      +  HG                P     + N+   
Sbjct: 222 --HLGNALTFDPNNY--KAILAAGSMMQTHGDFDVAMNKYRVAACAVPESPPLWNNIGMC 277

Query: 315 YHSKGDYEKAGLYYMASVKEINKPHEFIFPY-----YGLGQVQLKLGDFRSALTNFEKVL 369
           +  K  Y  A    ++ +K  N    ++ P+     Y LG V L +  + SA       +
Sbjct: 278 FFGKKKYVAA----ISCLKRAN----YLSPFDWKVLYNLGLVHLTMQQYASAFHFLSAAI 329

Query: 370 EIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAA 428
            + P   E    L      L  +E +     +A  +D  +    ++    L +  D  AA
Sbjct: 330 SLNPRMGELYMLLAVALTNLEDVENSTRAYEQAVNLDESNPLVNLNFAIFLYNHGDKTAA 389

Query: 429 LDAFK 433
           LD ++
Sbjct: 390 LDQYQ 394


>gi|326434630|gb|EGD80200.1| mbre TPR repeat protein [Salpingoeca sp. ATCC 50818]
          Length = 829

 Score = 66.6 bits (161), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 85/381 (22%), Positives = 157/381 (41%), Gaps = 65/381 (17%)

Query: 144 VEQASSAFKIVLEADRDNVPALL---GQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIR 200
           +E  +  F  V +A +D + A      +A VE  + R  D  E +            A+ 
Sbjct: 228 IESWAGGFGAVNQAVKDQLRAWCLDNAEAAVEGMQARGEDDTEVF-----------AALC 276

Query: 201 LGIGLCRYKLGQLGKARQAFQRALQL--------DPENVEALVALAVMDLQANEAAGIRK 252
             +GL   + G+  KAR+ F++A  +         P   +A + L    L  ++     +
Sbjct: 277 SQVGLVLREFGEHNKAREYFEKAKAIYVETLGEKHPSTADAYINLG---LTYDDKGDFDQ 333

Query: 253 GMEKMQRAFEI--------YPYCAMALNYLANHFFFTGQH-----FLVEQLTETALAVTN 299
            ++  Q+A +I        +P  A   + L N ++  G++     +  E L  T+ A+  
Sbjct: 334 AIDLYQKAKQIQAETLGNNHPGTAAVCSSLGNAYYAKGKYDKAIAYYQEDLAITSEALGE 393

Query: 300 HGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEIN------KPHEFIFPYYGLGQVQL 353
             P+ + +Y N+   Y+++G+Y+ A   Y  ++ EIN      K       +  +G V  
Sbjct: 394 KHPSAAQTYSNIGNVYYAQGEYDSAIKQYEKAM-EINLEALGEKHPGTANTHNNIGNVYF 452

Query: 354 KLGDFRSALTNFEKVLEIY--------PDNCETLKALGHIYVQLGQIEKAQELLRKAAKI 405
             G++  A+ +FEK  ++Y        P      K +G+     G+ + A E    A  I
Sbjct: 453 GKGEYDRAIEHFEKARKVYVETLGEKHPTTAIAYKGIGNALSSKGEHDTAIEYYAAAKAI 512

Query: 406 --------DPRDAQAFIDLGELLIS-SDTGAALDAFKTARTL-LKKAGEEVPIE--VLNN 453
                    P  A++F D G       + G A+D  + A+ + L+  GEE P      NN
Sbjct: 513 RLETLGPTHPDTAESFSDFGNAHSEIGEYGVAIDHLEAAKEIHLQTLGEEHPTTAYTFNN 572

Query: 454 IGVIHFEKGEFESAHQSFKDA 474
           +   + + GE+  A + ++ A
Sbjct: 573 LAAAYDDMGEYSKAMKYYERA 593



 Score = 45.1 bits (105), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 67/299 (22%), Positives = 118/299 (39%), Gaps = 48/299 (16%)

Query: 130 TWVGKGQLLLAKGE----VEQASSAFKIVLEADRDNVPALLGQ----ACVEFNRGRYSDS 181
           T+   G +  A+GE    ++Q   A +I LEA  +  P           V F +G Y  +
Sbjct: 401 TYSNIGNVYYAQGEYDSAIKQYEKAMEINLEALGEKHPGTANTHNNIGNVYFGKGEYDRA 460

Query: 182 LEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMD 241
           +E +++A +V+    G       +    +G           AL    E+  A+   A   
Sbjct: 461 IEHFEKARKVYVETLGEKHPTTAIAYKGIGN----------ALSSKGEHDTAIEYYAA-- 508

Query: 242 LQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAV---- 297
                A  IR     ++     +P  A + +   N     G++ +     E A  +    
Sbjct: 509 -----AKAIR-----LETLGPTHPDTAESFSDFGNAHSEIGEYGVAIDHLEAAKEIHLQT 558

Query: 298 -TNHGPTKSHSYYNLARSYHSKGDYEKAGLYY--MASVKEI---NKPHEFIFPYYGLGQV 351
                PT ++++ NLA +Y   G+Y KA  YY    ++K      K         GLG +
Sbjct: 559 LGEEHPTTAYTFNNLAAAYDDMGEYSKAMKYYERARAIKAAVLGEKHSSMASTCTGLGNL 618

Query: 352 QLKLGDFRSALTNFEKVLEI--------YPDNCETLKALGHIYVQLGQIEKAQELLRKA 402
             K+G    A+  FEK  EI        +P    TL+++G  + + G++++A+    +A
Sbjct: 619 YSKMGKHAEAIQCFEKAKEIQVATLGEVHPTTALTLESIGAEFAEQGRMDRARVFFEQA 677


>gi|254384605|ref|ZP_04999944.1| conserved hypothetical protein [Streptomyces sp. Mg1]
 gi|194343489|gb|EDX24455.1| conserved hypothetical protein [Streptomyces sp. Mg1]
          Length = 1033

 Score = 66.6 bits (161), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 68/263 (25%), Positives = 113/263 (42%), Gaps = 25/263 (9%)

Query: 167 GQACVEFNRGR-------YSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQA 219
           GQ+     RGR       Y  +L  Y+ AL + P    A   G G  R+  G+L +A   
Sbjct: 511 GQSLALTLRGRNHRNADAYPQALADYEHALALDPENERA-HFGRGRTRHLTGRLDEAIAD 569

Query: 220 FQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFF 279
           + RA++L PE+   L  ++   L    A    + +    R+ E+      AL      F 
Sbjct: 570 YTRAVELAPED---LTNVSYRGLALQVAERYEEAIADFDRSLELRSDYEWALTSRGATFR 626

Query: 280 FTGQHFLVEQLTETALAVTNHG----PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEI 335
             G++       E ALA  N      P  + ++ +   +++S G YE+A   +  +++  
Sbjct: 627 LMGRY-------EEALADFNRAVDLDPGSAWAHASRGAAFNSMGRYEEALADFHRAIE-- 677

Query: 336 NKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKA 395
            KP ++ +P  G G V   LG    A+  F + + + PD    L   G+ Y  LG+ E+A
Sbjct: 678 LKP-DYDWPLAGRGDVYRSLGRHEEAVAEFTRAIALTPDYWWALAGCGYSYTSLGRHEEA 736

Query: 396 QELLRKAAKIDPRDAQAFIDLGE 418
             +  +A  + P D  AF   G+
Sbjct: 737 VAVFTRAIALAPDDRWAFAGRGD 759


>gi|434402457|ref|YP_007145342.1| Tfp pilus assembly protein PilF [Cylindrospermum stagnale PCC 7417]
 gi|428256712|gb|AFZ22662.1| Tfp pilus assembly protein PilF [Cylindrospermum stagnale PCC 7417]
          Length = 496

 Score = 66.6 bits (161), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 82/324 (25%), Positives = 129/324 (39%), Gaps = 29/324 (8%)

Query: 299 NHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDF 358
           N  P  + +YYN   +    GD   A   Y  ++K IN    F   YY  G  + KLGD 
Sbjct: 125 NINPNFADAYYNRGNARAELGDMPGAITDYDQAIK-INP--NFAVAYYNRGNARAKLGDM 181

Query: 359 RSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGE 418
           + A+T+F + + I P+  E     G +  +LG ++ A   L +A KI+P  A+A+ + G 
Sbjct: 182 QGAITDFNQAININPNYAEAYTNRGTLRAELGDMQGAITDLNQAIKINPNFAKAYYNRGT 241

Query: 419 LLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDALG 476
           L         L   + A T L +A +  P   E   N G    E G+ ++A   F  A  
Sbjct: 242 LR------GKLGDMQGAITDLNQAIKINPNYTEAYGNRGNARAELGDMQTAITDFNQA-- 293

Query: 477 DGIWLTLLDSKTKTYVIDASASMLQFKDMQ-LFHRFENDGNHVELPWNKVTVLFNLARLL 535
             I     D        +A A +    DMQ     F      + +  N      N   + 
Sbjct: 294 --IKTNPNDPLPYNNRANARAKL---GDMQGAITDFN---QAININPNYANAYKNRGFVR 345

Query: 536 EQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYP-- 593
            ++ D   A   Y   +    +Y DAY           ++Q +I   N+A+ +N  +   
Sbjct: 346 AKLGDMQGAITDYNQAININPNYADAYFNRGNARYKLGDMQGAITDYNQAININPNFADA 405

Query: 594 -----NALSMLGDLELKNDDWVKA 612
                NA   LGD++    D+ +A
Sbjct: 406 YFNRGNARYKLGDMQGAITDYNQA 429



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 62/308 (20%), Positives = 129/308 (41%), Gaps = 22/308 (7%)

Query: 117 YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 176
           Y++A + + ++   +  +G      G++  A + +   +  + +   A   +       G
Sbjct: 86  YDQAIKTNPNDAQAYYNRGNARAELGDMPGAITDYDQAININPNFADAYYNRGNARAELG 145

Query: 177 RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVA 236
               ++  Y +A++++P+   A     G  R KLG +  A   F +A+ ++P   EA   
Sbjct: 146 DMPGAITDYDQAIKINPNFAVAY-YNRGNARAKLGDMQGAITDFNQAININPNYAEAYTN 204

Query: 237 LAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALA 296
              +     E   ++  +  + +A +I P  A A         +  +  L  +L +   A
Sbjct: 205 RGTLRA---ELGDMQGAITDLNQAIKINPNFAKA---------YYNRGTLRGKLGDMQGA 252

Query: 297 VTNHG------PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQ 350
           +T+        P  + +Y N   +    GD + A   +  ++K    P++ + PY     
Sbjct: 253 ITDLNQAIKINPNYTEAYGNRGNARAELGDMQTAITDFNQAIKT--NPNDPL-PYNNRAN 309

Query: 351 VQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDA 410
            + KLGD + A+T+F + + I P+     K  G +  +LG ++ A     +A  I+P  A
Sbjct: 310 ARAKLGDMQGAITDFNQAININPNYANAYKNRGFVRAKLGDMQGAITDYNQAININPNYA 369

Query: 411 QAFIDLGE 418
            A+ + G 
Sbjct: 370 DAYFNRGN 377



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 76/336 (22%), Positives = 139/336 (41%), Gaps = 34/336 (10%)

Query: 289 QLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGL 348
           Q+T+   A+  + P  + +YYN   +    GD   A   Y    + IN    F   YY  
Sbjct: 82  QITDYDQAIKTN-PNDAQAYYNRGNARAELGDMPGAITDY---DQAININPNFADAYYNR 137

Query: 349 GQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPR 408
           G  + +LGD   A+T++++ ++I P+        G+   +LG ++ A     +A  I+P 
Sbjct: 138 GNARAELGDMPGAITDYDQAIKINPNFAVAYYNRGNARAKLGDMQGAITDFNQAININPN 197

Query: 409 DAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAH 468
            A+A+ + G L       A L   + A T L +A     I++  N    ++ +G      
Sbjct: 198 YAEAYTNRGTLR------AELGDMQGAITDLNQA-----IKINPNFAKAYYNRGTLRGKL 246

Query: 469 QSFKDALGD-GIWLTLLDSKTKTYVIDASASMLQFKDMQL----FHRFENDGNHVELPWN 523
              + A+ D    + +  + T+ Y    +A   +  DMQ     F++      +  LP+N
Sbjct: 247 GDMQGAITDLNQAIKINPNYTEAYGNRGNARA-ELGDMQTAITDFNQAIKTNPNDPLPYN 305

Query: 524 KVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVN 583
                 N A    ++ D   A   +   +    +Y +AY     +     ++Q +I   N
Sbjct: 306 ------NRANARAKLGDMQGAITDFNQAININPNYANAYKNRGFVRAKLGDMQGAITDYN 359

Query: 584 EALKVNGKYP-------NALSMLGDLELKNDDWVKA 612
           +A+ +N  Y        NA   LGD++    D+ +A
Sbjct: 360 QAININPNYADAYFNRGNARYKLGDMQGAITDYNQA 395



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 66/316 (20%), Positives = 134/316 (42%), Gaps = 12/316 (3%)

Query: 117 YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 176
           Y++A +I+ +    +  +G      G+++ A + F   +  + +   A   +  +    G
Sbjct: 154 YDQAIKINPNFAVAYYNRGNARAKLGDMQGAITDFNQAININPNYAEAYTNRGTLRAELG 213

Query: 177 RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVA 236
               ++    +A++++P+   A     G  R KLG +  A     +A++++P   EA   
Sbjct: 214 DMQGAITDLNQAIKINPNFAKAY-YNRGTLRGKLGDMQGAITDLNQAIKINPNYTEAYGN 272

Query: 237 LAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALA 296
               + +A E   ++  +    +A +  P   +  N  AN     G   +   +T+   A
Sbjct: 273 RG--NARA-ELGDMQTAITDFNQAIKTNPNDPLPYNNRANARAKLGD--MQGAITDFNQA 327

Query: 297 VTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLG 356
           + N  P  +++Y N        GD + A   Y    + IN    +   Y+  G  + KLG
Sbjct: 328 I-NINPNYANAYKNRGFVRAKLGDMQGAITDYN---QAININPNYADAYFNRGNARYKLG 383

Query: 357 DFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDL 416
           D + A+T++ + + I P+  +     G+   +LG ++ A     +A  I+P  A A+++ 
Sbjct: 384 DMQGAITDYNQAININPNFADAYFNRGNARYKLGDMQGAITDYNQAININPNFADAYLNR 443

Query: 417 G--ELLISSDTGAALD 430
           G   L +    GA  D
Sbjct: 444 GIASLALGDKQGAIAD 459


>gi|52842693|ref|YP_096492.1| hypothetical protein lpg2485 [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|378778381|ref|YP_005186820.1| hypothetical protein lp12_2477 [Legionella pneumophila subsp.
           pneumophila ATCC 43290]
 gi|52629804|gb|AAU28545.1| TPR domain protein [Legionella pneumophila subsp. pneumophila str.
           Philadelphia 1]
 gi|364509197|gb|AEW52721.1| TPR domain protein [Legionella pneumophila subsp. pneumophila ATCC
           43290]
          Length = 571

 Score = 66.6 bits (161), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 82/367 (22%), Positives = 149/367 (40%), Gaps = 29/367 (7%)

Query: 65  EGSSPEIDEYYADVRYE---RIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKAS 121
           EG  P+    Y  +  +       L+ LG+ Y  LG +E            A  Y+ +A 
Sbjct: 18  EGHLPQAISLYEQILAQSPKHTETLHFLGLTYAQLGDMEN-----------AILYFLQAR 66

Query: 122 RIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDS 181
           +I+ ++              G++++A   ++  +E   + V A    A        Y  +
Sbjct: 67  KINPNDVGILNNLANAYKKAGQLDEAIKYYQQAIEIKPEYVQAHNNLAATYALLNNYQKA 126

Query: 182 LEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMD 241
           L  Y  A+   P    A    +GL   K  QL  A+  F   + L+P++ EA   L ++ 
Sbjct: 127 LHHYVIAVNTEPDFSAA-HFNLGLLLLKNQQLSAAKTQFNNVIALNPQHREAQFYLGILH 185

Query: 242 LQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG 301
           L+ N  +   +   K+      +    + L  +A       Q+ L       ALA+ N  
Sbjct: 186 LEDNLLSEAEQAFHKVLEQDHEHVQSLINLGVIA---LKREQNQLAVDYFTKALALDNED 242

Query: 302 PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSA 361
               +   NLA ++     +E A ++Y   +K+     E++   Y  G  Q+ LG    A
Sbjct: 243 IDARN---NLAATFMHHDRFENALMHYDVLLKKEPDNLEYL---YNSGVAQMALGHLNEA 296

Query: 362 LTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLI 421
              F+++L +  D+  +L  L  IY+++   E A+E L +A  I+P D      +   ++
Sbjct: 297 TLLFDQILTLQSDHTPSLNNLAAIYLKMDMRETAREYLERALAINPDDV-----ISRHML 351

Query: 422 SSDTGAA 428
           ++ TGA 
Sbjct: 352 NAITGAT 358


>gi|326431071|gb|EGD76641.1| tetratricopeptide protein [Salpingoeca sp. ATCC 50818]
          Length = 753

 Score = 66.6 bits (161), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 90/367 (24%), Positives = 149/367 (40%), Gaps = 53/367 (14%)

Query: 161 NVPALLGQ-ACVEFNRGRYSDSLEFYKRALQV--------HPSCPGAIRLGIGLCRYKLG 211
           NV AL        +++G+Y  ++ FY++AL +        HPS        +G   +  G
Sbjct: 212 NVAALYNNLGIANYSKGKYEKAIAFYEKALAITVEVLGEKHPSTADTYN-SLGAAYHSKG 270

Query: 212 QLGKARQAFQRALQL--------DPENVEALVALAVMDLQANEAAGIRKGME-----KMQ 258
           +  KA Q ++ AL +         P+  +    L+       E A   +  E     +++
Sbjct: 271 EYAKAIQQYENALAIRLETLGKKHPKTADIYNNLSAAYHSKGEYATAIQQYENALAIRLE 330

Query: 259 RAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHS-----YYNLAR 313
              E +P  A   N L + +   GQ+       E ALA+      + HS     Y  L  
Sbjct: 331 TLGEKHPNTADTYNNLGSVYSSEGQYDKAIHFHEKALAIRVETLGEKHSRTASAYLGLGL 390

Query: 314 SYHSKGDYEKAGLYY---MASVKEI--NKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKV 368
           +Y  KGDY+KA  ++   +A   E+   K       Y  LG      G++  A+  +EK 
Sbjct: 391 AYQRKGDYDKAIHFHEKDLAITAEVLGEKHPSTADTYNNLGIAYRSKGEYGKAIDYYEKA 450

Query: 369 LEI--------YPDNCETLKALGHIYVQLGQIEKAQELLRKAAKID--------PRDAQA 412
           L I        +P   +T   LG  Y   G  +KA     KA  I         P  A  
Sbjct: 451 LAIRVKALGEKHPSTADTYNNLGSAYDDKGDYDKAIAFYEKALAITVVVLGEKHPSTATT 510

Query: 413 FIDLGELLIS-SDTGAALDAFKTARTL-LKKAGEEVP--IEVLNNIGVIHFEKGEFESAH 468
           + +LGE   S  +   A++ ++ A  + ++  G + P   +  NNIG++H ++G+ E A 
Sbjct: 511 YNNLGEAYHSKGEYEKAIELYEKALAITVETLGVKHPDTADTCNNIGLLHNDRGDKEQAC 570

Query: 469 QSFKDAL 475
              + AL
Sbjct: 571 SYMQQAL 577


>gi|332711804|ref|ZP_08431735.1| glycosyltransferase involved in cell wall biogenesis [Moorea
            producens 3L]
 gi|332349782|gb|EGJ29391.1| glycosyltransferase involved in cell wall biogenesis [Moorea
            producens 3L]
          Length = 1427

 Score = 66.6 bits (161), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 78/300 (26%), Positives = 118/300 (39%), Gaps = 60/300 (20%)

Query: 113  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPAL--LGQAC 170
            A Q Y K      + P    G G L    G+ + A   F+  +EA+ ++V A   LG  C
Sbjct: 793  AVQLYYKILEQQPNHPEALYGLGVLAQQTGQYDTAEKLFRATVEAEPNSVKAWFSLGNLC 852

Query: 171  VEFNRGRYSDSLEFYKRALQVHPS-CPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPE 229
                +G+ SDS+E Y+R L + P+  P    LG  L   + G    A  ++Q+AL+++P 
Sbjct: 853  Q--GQGQLSDSVECYQRVLTIQPNLVPVYNNLGYAL--QQQGNWDDAIASYQQALEIEPT 908

Query: 230  NVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQ 289
              EA V L    L A E   + K                                     
Sbjct: 909  CTEADVNLGNA-LHAQEKLALEK------------------------------------- 930

Query: 290  LTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLG 349
              +   A  NH          L  +    GD   A  YY  +V       + +  +Y LG
Sbjct: 931  --QAHYAQLNH---------ELGVTRQKAGDLTNAVAYYRQAVA---MQSDLVSAHYNLG 976

Query: 350  QVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAK-IDPR 408
             V    G+F +A+ +++KVLE+ P   E    LG IY    Q+E+A    R+    ++PR
Sbjct: 977  VVLQDQGEFENAIASYQKVLELNPSYGEVYFNLGRIYQTQKQLEEAASAYRQGLMLVNPR 1036



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 67/262 (25%), Positives = 125/262 (47%), Gaps = 23/262 (8%)

Query: 225 QLDPENVEALVALAVMDLQA---NEAAGIRKGMEKMQRAFE------IYPYCAMALNYLA 275
           QL   N+E+L+  A  + Q    +EA  I + + ++Q  ++      + PY  +A+   A
Sbjct: 5   QLLESNLESLINTAAQNHQLGKLDEAESIYRQVIQIQGDYQGEEKSLLKPYNVIAIANFA 64

Query: 276 NHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEI 335
           + F    +      L + AL +    P  +  + NL   + +KG+ +KA  YY  ++K  
Sbjct: 65  SIFEEKNKLEEAVALYQQALTLK---PDFAEVHNNLGNIFWAKGELDKAVQYYQEAIKV- 120

Query: 336 NKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKA 395
            KP ++   +  LG +    G    A+  +++ + + PD  +    LG++    G+++ A
Sbjct: 121 -KP-DYAVAHNNLGNLLHNQGKLGEAVHCYQEAIRVKPDYAQAYCNLGNVLQVQGKLDAA 178

Query: 396 QELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLNN 453
           +E  ++A K+     QA  +LG L     T   LDA   AR   ++A    P   +  NN
Sbjct: 179 RESYQEAIKLKADCFQAHNNLGTLF---QTQGKLDA---ARESYQEAIRLKPDYADAHNN 232

Query: 454 IGVIHFEKGEFESAHQSFKDAL 475
           +G I  ++G+ E A QS+++A+
Sbjct: 233 LGTILQKQGKLEEAVQSYQEAI 254



 Score = 56.6 bits (135), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 66/280 (23%), Positives = 131/280 (46%), Gaps = 25/280 (8%)

Query: 208 YKLGQLGKARQAFQRALQ------------LDPENVEALVALAVMDLQANEAAGIRKGME 255
           ++LG+L +A   +++ +Q            L P NV A+   A +  + N+   + + + 
Sbjct: 22  HQLGKLDEAESIYRQVIQIQGDYQGEEKSLLKPYNVIAIANFASIFEEKNK---LEEAVA 78

Query: 256 KMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSY 315
             Q+A  + P  A   N L N F+  G+     Q  + A+ V    P  + ++ NL    
Sbjct: 79  LYQQALTLKPDFAEVHNNLGNIFWAKGELDKAVQYYQEAIKVK---PDYAVAHNNLGNLL 135

Query: 316 HSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDN 375
           H++G   +A   Y  +++   KP ++   Y  LG V    G   +A  ++++ +++  D 
Sbjct: 136 HNQGKLGEAVHCYQEAIRV--KP-DYAQAYCNLGNVLQVQGKLDAARESYQEAIKLKADC 192

Query: 376 CETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTA 435
            +    LG ++   G+++ A+E  ++A ++ P  A A  +LG +L     G   +A ++ 
Sbjct: 193 FQAHNNLGTLFQTQGKLDAARESYQEAIRLKPDYADAHNNLGTIL--QKQGKLEEAVQSY 250

Query: 436 RTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
           +  ++   +    EV NN+G    E+ + E A QS++ AL
Sbjct: 251 QEAIRLKPDFA--EVYNNLGNTLHEQCKLEEALQSYQQAL 288



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 47/196 (23%), Positives = 83/196 (42%), Gaps = 26/196 (13%)

Query: 653 EATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQ 712
           +A  L +A +LY +++ Q  ++  A  G GV+  + GQ+D ++ LF    EA   SV   
Sbjct: 786 QANRLNQAVQLYYKILEQQPNHPEALYGLGVLAQQTGQYDTAEKLFRATVEAEPNSV--- 842

Query: 713 MPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQ---WQDC 769
               W +L ++   QG  + +++ YQ  L          ++       Y  +Q   W D 
Sbjct: 843 --KAWFSLGNLCQGQGQLSDSVECYQRVL-----TIQPNLVPVYNNLGYALQQQGNWDDA 895

Query: 770 KKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQK-------------TRRTADEVRSTV 816
             S  +A+ + P+      + G A+       L+K             TR+ A ++ + V
Sbjct: 896 IASYQQALEIEPTCTEADVNLGNALHAQEKLALEKQAHYAQLNHELGVTRQKAGDLTNAV 955

Query: 817 AELENAVRVFSHLSAA 832
           A    AV + S L +A
Sbjct: 956 AYYRQAVAMQSDLVSA 971



 Score = 47.0 bits (110), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 60/283 (21%), Positives = 129/283 (45%), Gaps = 22/283 (7%)

Query: 142 GEVEQASSAFKIVLEADRD------------NVPALLGQACVEFNRGRYSDSLEFYKRAL 189
           G++++A S ++ V++   D            NV A+   A +   + +  +++  Y++AL
Sbjct: 25  GKLDEAESIYRQVIQIQGDYQGEEKSLLKPYNVIAIANFASIFEEKNKLEEAVALYQQAL 84

Query: 190 QVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAG 249
            + P     +   +G   +  G+L KA Q +Q A+++ P+   A   L   +L  N+   
Sbjct: 85  TLKPDF-AEVHNNLGNIFWAKGELDKAVQYYQEAIKVKPDYAVAHNNLG--NLLHNQGK- 140

Query: 250 IRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYY 309
           + + +   Q A  + P  A A   L N     G+     +  + A+ +      ++H+  
Sbjct: 141 LGEAVHCYQEAIRVKPDYAQAYCNLGNVLQVQGKLDAARESYQEAIKLKADC-FQAHN-- 197

Query: 310 NLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVL 369
           NL   + ++G  + A   Y  +++   KP ++   +  LG +  K G    A+ ++++ +
Sbjct: 198 NLGTLFQTQGKLDAARESYQEAIRL--KP-DYADAHNNLGTILQKQGKLEEAVQSYQEAI 254

Query: 370 EIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQA 412
            + PD  E    LG+   +  ++E+A +  ++A  I+P  A+A
Sbjct: 255 RLKPDFAEVYNNLGNTLHEQCKLEEALQSYQQALSINPNLAEA 297



 Score = 45.1 bits (105), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 70/305 (22%), Positives = 128/305 (41%), Gaps = 28/305 (9%)

Query: 521 PWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIE 580
           P+N V  + N A + E+ +    A  LY+  L    D+ + +  L  I  A+  L  +++
Sbjct: 54  PYN-VIAIANFASIFEEKNKLEEAVALYQQALTLKPDFAEVHNNLGNIFWAKGELDKAVQ 112

Query: 581 LVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYAT--LSLGNWN 638
              EA+KV   Y  A + LG+L L N    K  E      +A   K  YA    +LGN  
Sbjct: 113 YYQEAIKVKPDYAVAHNNLGNL-LHNQG--KLGEAVHCYQEAIRVKPDYAQAYCNLGN-- 167

Query: 639 YFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLF 698
               L+ + +        L+ A+E Y   I        A N  G +   +G+ D +++ +
Sbjct: 168 ---VLQVQGK--------LDAARESYQEAIKLKADCFQAHNNLGTLFQTQGKLDAARESY 216

Query: 699 TQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTD-AQILLYLA 757
              QEA    +     D   NL  +   QG    A++ YQ  +R      D A++   L 
Sbjct: 217 ---QEAI--RLKPDYADAHNNLGTILQKQGKLEEAVQSYQEAIR---LKPDFAEVYNNLG 268

Query: 758 RTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVA 817
            T +E  + ++  +S  +A+ + P+    +    V       S++ + + T +  + ++ 
Sbjct: 269 NTLHEQCKLEEALQSYQQALSINPNLAEAKLAMCVCQIPIIYSSVDEIKVTRNNYQGSLK 328

Query: 818 ELENA 822
           +L ++
Sbjct: 329 KLADS 333



 Score = 41.6 bits (96), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 54/249 (21%), Positives = 98/249 (39%), Gaps = 24/249 (9%)

Query: 505  MQLFHR-FENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYL 563
            +QL+++  E   NH E        L+ L  L +Q      A  L+R  +    + V A+ 
Sbjct: 794  VQLYYKILEQQPNHPE-------ALYGLGVLAQQTGQYDTAEKLFRATVEAEPNSVKAWF 846

Query: 564  RLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAA---- 619
             L  + + +  L  S+E     L +        + LG    +  +W  A  +++ A    
Sbjct: 847  SLGNLCQGQGQLSDSVECYQRVLTIQPNLVPVYNNLGYALQQQGNWDDAIASYQQALEIE 906

Query: 620  -----SDATDGKDSYA--TLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHT 672
                 +D   G   +A   L+L    ++A L +E    + +A  L  A   Y + +   +
Sbjct: 907  PTCTEADVNLGNALHAQEKLALEKQAHYAQLNHELGVTRQKAGDLTNAVAYYRQAVAMQS 966

Query: 673  SNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFAL 732
              + A    GVVL ++G+F+ +   + +V E           +V+ NL  +Y  Q     
Sbjct: 967  DLVSAHYNLGVVLQDQGEFENAIASYQKVLELNPS-----YGEVYFNLGRIYQTQKQLEE 1021

Query: 733  AMKMYQNCL 741
            A   Y+  L
Sbjct: 1022 AASAYRQGL 1030



 Score = 39.3 bits (90), Expect = 9.4,   Method: Compositional matrix adjust.
 Identities = 43/195 (22%), Positives = 82/195 (42%), Gaps = 24/195 (12%)

Query: 302 PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSA 361
           P    + Y L       G Y+ A   + A+V+   +P+  +  ++ LG +    G    +
Sbjct: 805 PNHPEALYGLGVLAQQTGQYDTAEKLFRATVEA--EPNS-VKAWFSLGNLCQGQGQLSDS 861

Query: 362 LTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLI 421
           +  +++VL I P+       LG+   Q G  + A    ++A +I+P   +A ++LG  L 
Sbjct: 862 VECYQRVLTIQPNLVPVYNNLGYALQQQGNWDDAIASYQQALEIEPTCTEADVNLGNALH 921

Query: 422 SSDTGAALDAFKTAR------TLLKKAGEEVP---------------IEVLNNIGVIHFE 460
           + +  A       A+         +KAG+                  +    N+GV+  +
Sbjct: 922 AQEKLALEKQAHYAQLNHELGVTRQKAGDLTNAVAYYRQAVAMQSDLVSAHYNLGVVLQD 981

Query: 461 KGEFESAHQSFKDAL 475
           +GEFE+A  S++  L
Sbjct: 982 QGEFENAIASYQKVL 996


>gi|297304121|ref|XP_002806323.1| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit [Macaca
           mulatta]
          Length = 963

 Score = 66.6 bits (161), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 104/479 (21%), Positives = 189/479 (39%), Gaps = 29/479 (6%)

Query: 142 GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 201
           G+ E A      +   + DN   LL  + + F   R   S  F   A++ +P    A   
Sbjct: 35  GDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYS- 93

Query: 202 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 261
            +G    + GQL +A + ++ AL+L P+ ++  + LA   + A +  G    ++    A 
Sbjct: 94  NLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEG---AVQAYVSAL 150

Query: 262 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 319
           +  P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G
Sbjct: 151 QYNPDLYCVRS--DLGNLLKALGR---LEEAKACYLKAIETQPNFAVAWSNLGCVFNAQG 205

Query: 320 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 379
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++    
Sbjct: 206 EIWLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVH 262

Query: 380 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGA-ALDAFKTARTL 438
             L  +Y + G I+ A +  R+A ++ P    A+ +L   L    + A A D + TA  L
Sbjct: 263 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRL 322

Query: 439 LKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASAS 498
                +      LNN+  I  E+G  E A + ++ AL       +       +   AS  
Sbjct: 323 CPTHADS-----LNNLANIKREQGNIEEAVRLYRKAL------EVFPEFAAAHSNLASVL 371

Query: 499 MLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDY 558
             Q K  +    ++     + +         N+   L+++ D   A   Y   +     +
Sbjct: 372 QQQGKLQEALMHYKEA---IRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAF 428

Query: 559 VDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFR 617
            DA+  LA+I K   N+  +I     ALK+   +P+A   L        DW    E  +
Sbjct: 429 ADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMK 487



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 86/386 (22%), Positives = 164/386 (42%), Gaps = 24/386 (6%)

Query: 93  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 152
           Y+ LG +  ++ + +E    A ++Y  A R+       ++     L+A G++E A  A+ 
Sbjct: 92  YSNLGNVYKERGQLQE----AIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 147

Query: 153 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 210
             L+ + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 148 SALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIETQPNFAVAWS-NLGCVFNAQ 204

Query: 211 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 270
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 205 GEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAAYLRALSLSPNHAVV 261

Query: 271 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 330
              LA  ++  G   L       A+ +  H P    +Y NLA +   KG   +A   Y  
Sbjct: 262 HGNLACVYYEQGLIDLAIDTYRRAIELQPHFPD---AYCNLANALKEKGSVAEAEDCYNT 318

Query: 331 SVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLG 390
           +++      + +     L  ++ + G+   A+  + K LE++P+       L  +  Q G
Sbjct: 319 ALRLCPTHADSL---NNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQG 375

Query: 391 QIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGEEVPIE 449
           ++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +          +
Sbjct: 376 KLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQI-----NPAFAD 430

Query: 450 VLNNIGVIHFEKGEFESAHQSFKDAL 475
             +N+  IH + G    A  S++ AL
Sbjct: 431 AHSNLASIHKDSGNIPEAIASYRTAL 456



 Score = 42.7 bits (99), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 76/347 (21%), Positives = 140/347 (40%), Gaps = 57/347 (16%)

Query: 278 FFFTGQHFLVEQLTETA----LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK 333
              +  HF   +L  +A    LA+    P  + +Y NL   Y  +G  ++A  +Y  +++
Sbjct: 59  LLLSSIHFQCRRLDRSAHFSTLAI-KQNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALR 117

Query: 334 EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIE 393
              KP +FI  Y  L    +  GD   A+  +   L+  PD       LG++   LG++E
Sbjct: 118 L--KP-DFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLE 174

Query: 394 KAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNN 453
           +A+    KA +  P  A A+ +LG                    +    GE         
Sbjct: 175 EAKACYLKAIETQPNFAVAWSNLG-------------------CVFNAQGEIW------- 208

Query: 454 IGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVID-ASASMLQFKDMQLFHRFE 512
           + + HFEK    +   +F DA     ++ L +   +  + D A A+ L+   +       
Sbjct: 209 LAIHHFEKAV--TLDPNFLDA-----YINLGNVLKEARIFDRAVAAYLRALSLS------ 255

Query: 513 NDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKAR 572
              NH  +  N   V +    L++   DT      YR  +     + DAY  LA   K +
Sbjct: 256 --PNHAVVHGNLACVYYEQG-LIDLAIDT------YRRAIELQPHFPDAYCNLANALKEK 306

Query: 573 NNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAA 619
            ++  + +  N AL++   + ++L+ L +++ +  +  +A   +R A
Sbjct: 307 GSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKA 353


>gi|72383519|ref|YP_292874.1| TPR repeat-containing protein [Prochlorococcus marinus str. NATL2A]
 gi|72003369|gb|AAZ59171.1| TPR repeat [Prochlorococcus marinus str. NATL2A]
          Length = 362

 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 76/329 (23%), Positives = 150/329 (45%), Gaps = 22/329 (6%)

Query: 105 EKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPA 164
           EK+E+  + T   +K S+         + +      KG +++A+  +++ +E    +   
Sbjct: 28  EKQENLTIKTNTPSKPSK------EQIINQAIQFHLKGNIQEAAKYYQLFVEQGFKDHIV 81

Query: 165 LLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRAL 224
                 V  N  +  D+   Y++A+++ P    A    +G    +LG+L  A  ++++A+
Sbjct: 82  FSNYGVVLKNLAQTQDAELSYRKAIEIKPDYADA-HYNLGNLLKELGKLQDAELSYRKAI 140

Query: 225 QLDPENVEALVALAVM--DLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTG 282
           ++ P+  +A   L ++  DL  ++ A +       ++A +I P  A A   L       G
Sbjct: 141 EIKPDYADAHYNLGIILNDLGKSQEAEL-----SYRKAIKIKPDYAEAHYNLGIILNDLG 195

Query: 283 QHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFI 342
           +    E     A+ + +     + ++YNL    +  G  ++A L Y  ++K   KP ++ 
Sbjct: 196 KSDQAELSYRRAIEIKS---DYADAHYNLGNLLNDLGKSQEAELSYRKAIKI--KP-DYA 249

Query: 343 FPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKA 402
             +Y LG +   LG    A  ++ + +EI  D  +    LG+I   LG+++ A+   RKA
Sbjct: 250 EAHYNLGIILNDLGKSDQAELSYRRAIEIKSDYADAHLNLGNILRDLGELQDAELSTRKA 309

Query: 403 AKIDPRDAQAFIDLGELLISSDTGAALDA 431
            +I P +  A ++LG +L   D G   DA
Sbjct: 310 IEIKPDNTDAHLNLGNIL--RDLGKLKDA 336



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 56/223 (25%), Positives = 106/223 (47%), Gaps = 14/223 (6%)

Query: 176 GRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV 235
           G+  D+   Y++A+++ P    A    +G+    LG+  +A  ++++A+++ P+  EA  
Sbjct: 127 GKLQDAELSYRKAIEIKPDYADA-HYNLGIILNDLGKSQEAELSYRKAIKIKPDYAEAHY 185

Query: 236 ALAVM--DLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTET 293
            L ++  DL  ++ A +       +RA EI    A A   L N     G+    E     
Sbjct: 186 NLGIILNDLGKSDQAEL-----SYRRAIEIKSDYADAHYNLGNLLNDLGKSQEAELSYRK 240

Query: 294 ALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQL 353
           A+ +    P  + ++YNL    +  G  ++A L Y  ++ EI    ++   +  LG +  
Sbjct: 241 AIKIK---PDYAEAHYNLGIILNDLGKSDQAELSYRRAI-EIKS--DYADAHLNLGNILR 294

Query: 354 KLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQ 396
            LG+ + A  +  K +EI PDN +    LG+I   LG+++ A+
Sbjct: 295 DLGELQDAELSTRKAIEIKPDNTDAHLNLGNILRDLGKLKDAR 337



 Score = 49.7 bits (117), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 75/318 (23%), Positives = 134/318 (42%), Gaps = 61/318 (19%)

Query: 285 FLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFP 344
             VEQ  +  +  +N+G        NLA++  ++  Y KA         EI KP ++   
Sbjct: 70  LFVEQGFKDHIVFSNYGVVLK----NLAQTQDAELSYRKA--------IEI-KP-DYADA 115

Query: 345 YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAK 404
           +Y LG +  +LG  + A  ++ K +EI PD  +    LG I   LG+ ++A+   RKA K
Sbjct: 116 HYNLGNLLKELGKLQDAELSYRKAIEIKPDYADAHYNLGIILNDLGKSQEAELSYRKAIK 175

Query: 405 IDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEF 464
           I P  A+A  +LG  +I +D G +  A  + R           IE+          K ++
Sbjct: 176 IKPDYAEAHYNLG--IILNDLGKSDQAELSYRR---------AIEI----------KSDY 214

Query: 465 ESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNK 524
             AH +  + L D                     + + ++ +L +R       +++  + 
Sbjct: 215 ADAHYNLGNLLND---------------------LGKSQEAELSYR-----KAIKIKPDY 248

Query: 525 VTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNE 584
               +NL  +L  +  +  A + YR  +    DY DA+L L  I +    LQ +     +
Sbjct: 249 AEAHYNLGIILNDLGKSDQAELSYRRAIEIKSDYADAHLNLGNILRDLGELQDAELSTRK 308

Query: 585 ALKVNGKYPNALSMLGDL 602
           A+++     +A   LG++
Sbjct: 309 AIEIKPDNTDAHLNLGNI 326


>gi|260814956|ref|XP_002602179.1| hypothetical protein BRAFLDRAFT_76867 [Branchiostoma floridae]
 gi|229287486|gb|EEN58191.1| hypothetical protein BRAFLDRAFT_76867 [Branchiostoma floridae]
          Length = 1211

 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 92/380 (24%), Positives = 159/380 (41%), Gaps = 70/380 (18%)

Query: 164  ALLGQACVEFNRGRYSDSLEFYKRALQV----------HPSCPGAIRLG-IGLCRYKLGQ 212
            +L+       N G Y+ ++ +YK++LQ+          HP    AI L  +G+   KLG 
Sbjct: 662  SLINMGNAWLNLGDYTKAVSYYKQSLQITRRIYGEDIAHPDI--AISLNNMGIACSKLGD 719

Query: 213  LGKARQAFQRALQL----------DPENVEAL--VALAVMDLQA-NEAAGIRKGMEKMQR 259
             GKA   ++++LQ+           P+   +L  + +A  +L    +A    +   +M+R
Sbjct: 720  YGKAISYYEQSLQMRRSIYGEDTAHPDIAHSLNNMGIAWWNLGYYGKAISYYEQSLQMRR 779

Query: 260  AF----EIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVT-------NHGPTKSHSY 308
            +       +PY A +L+ L N +   G H       E AL +        N  P  + S 
Sbjct: 780  SIYGEDTAHPYIADSLDSLGNAWGSLGDHRKAISYYEQALQMMRSVYGEDNAHPDIAGSL 839

Query: 309  YNLARSYHSKGDYEKAGLYYMASVKEINKPH-------EFIFPYYGLGQVQLKLGDFRSA 361
            +N+  ++   GDY KA  YY  S++ I + +               LG     LGD R A
Sbjct: 840  HNMGNAWRKLGDYRKAVNYYEQSLQMIRRIYGEDTAHPNIAASLTSLGNAWGDLGDHRKA 899

Query: 362  LTNFEKVLEI----------YPDNCETLKALGHIYVQLG-------QIEKAQELLRKAAK 404
            ++ +E+ LE+          +P+   +L  LG I+  LG         E+A +++R    
Sbjct: 900  ISYYEQALEMKRSTYGKGTTHPEIARSLNNLGTIWNNLGYHRKAISYYEQALQMMRSIYG 959

Query: 405  ID---PRDAQAFIDLGELLIS-SDTGAALDAFKTA----RTLLKKAGEEVPIEV-LNNIG 455
             D   P  A +  ++G    S  D   A+  ++ A    R++  +      I   LNN+G
Sbjct: 960  EDNAHPDIAGSLYNMGNAWGSLGDHRKAISYYEQALQMKRSIYGEGTAHPDIAASLNNLG 1019

Query: 456  VIHFEKGEFESAHQSFKDAL 475
             I    G+   A+  ++ AL
Sbjct: 1020 AIWNNLGDHRKANSYYEQAL 1039



 Score = 40.8 bits (94), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 49/193 (25%), Positives = 83/193 (43%), Gaps = 35/193 (18%)

Query: 235 VALAVMDLQANEAAGIRKGMEKMQRAFEIY------PYCAMALNYLANHFFFTGQH---- 284
           +A A+M L  ++ A +R   + +Q  + +Y      P  A +LN L   + F G H    
Sbjct: 578 LAFALMTLGDHKKA-VRYLEQTLQMRWSMYGEGTAHPDIAESLNNLGEAWSFLGDHGKAL 636

Query: 285 FLVEQLTETALAV----TNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK------- 333
              EQ  +   ++    T H P    S  N+  ++ + GDY KA  YY  S++       
Sbjct: 637 CYFEQTLQMMRSIYGEETAH-PVILKSLINMGNAWLNLGDYTKAVSYYKQSLQITRRIYG 695

Query: 334 -EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEI----------YPDNCETLKAL 382
            +I  P +       +G    KLGD+  A++ +E+ L++          +PD   +L  +
Sbjct: 696 EDIAHP-DIAISLNNMGIACSKLGDYGKAISYYEQSLQMRRSIYGEDTAHPDIAHSLNNM 754

Query: 383 GHIYVQLGQIEKA 395
           G  +  LG   KA
Sbjct: 755 GIAWWNLGYYGKA 767


>gi|403367671|gb|EJY83659.1| TPR Domain containing protein [Oxytricha trifallax]
          Length = 1407

 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 68/293 (23%), Positives = 129/293 (44%), Gaps = 12/293 (4%)

Query: 108  EHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLG 167
            E +  + +Y  KA  ++ + P   V  G LL   G  ++A    K  L  +   + AL+G
Sbjct: 1126 EEYEKSAEYLKKALTVNKYYPLALVSMGNLLFETGHADEAIKYHKQALVINEKELQALIG 1185

Query: 168  QACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLD 227
                 ++  +  +++ +YKRAL +       +   +G   Y +  + +A   ++ A+ L+
Sbjct: 1186 LGNAFYDSSQPMEAINYYKRALAIDDQLSD-VHYNLGNALYLVENIDEAVMHYREAINLN 1244

Query: 228  PENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLV 287
            P+  E+   L       NE       +   Q+A E+ P  A AL  L N ++   Q    
Sbjct: 1245 PKKAESYYNLGNALCVKNEYPN---AVNAYQQALELDPKNAPALYNLGNAYYMLNQFTDA 1301

Query: 288  EQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK-EINKPHEFIFPYY 346
             ++   AL +       +  ++NLA +Y+   +Y+ A ++Y  +V+ + N    F+    
Sbjct: 1302 IKVYLRALDINEES---AECHFNLASAYNDVQNYQGAIIHYKRAVELDENNTDAFV---- 1354

Query: 347  GLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELL 399
             LG V   + DF  A   +  VL+   DN + ++AL  +     Q   +++LL
Sbjct: 1355 CLGGVFESVKDFDKAERYYRLVLQREKDNIKAIEALKKLKAGQQQQTSSKQLL 1407



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 67/306 (21%), Positives = 126/306 (41%), Gaps = 45/306 (14%)

Query: 113  ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQAS-SAFKIVLEADRDNVPALLGQACV 171
            A +Y+  A RID    +   G  + L    E + A    F++VL+ D  +  A      +
Sbjct: 1062 AAKYFKHAIRIDNDSVNARFGLAKTLQQFSENKDAPIEHFEMVLQKDTSHFKAATQLGIL 1121

Query: 172  EFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENV 231
              +R  Y  S E+ K+AL V+   P A+ + +G   ++ G   +A +  ++AL ++ + +
Sbjct: 1122 YLDREEYEKSAEYLKKALTVNKYYPLAL-VSMGNLLFETGHADEAIKYHKQALVINEKEL 1180

Query: 232  EALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLT 291
            +AL+ L                                      N F+ + Q        
Sbjct: 1181 QALIGLG-------------------------------------NAFYDSSQPMEAINYY 1203

Query: 292  ETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQV 351
            + ALA+ +     S  +YNL  + +   + ++A ++Y  ++    K  E    YY LG  
Sbjct: 1204 KRALAIDDQL---SDVHYNLGNALYLVENIDEAVMHYREAINLNPKKAE---SYYNLGNA 1257

Query: 352  QLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQ 411
                 ++ +A+  +++ LE+ P N   L  LG+ Y  L Q   A ++  +A  I+   A+
Sbjct: 1258 LCVKNEYPNAVNAYQQALELDPKNAPALYNLGNAYYMLNQFTDAIKVYLRALDINEESAE 1317

Query: 412  AFIDLG 417
               +L 
Sbjct: 1318 CHFNLA 1323



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 86/353 (24%), Positives = 137/353 (38%), Gaps = 47/353 (13%)

Query: 156 EADRDNVPALLGQACVEFNRGRYSDSLE-FYKRALQVHPSCPGAIRLGIGLCRYKLGQLG 214
           ++D + V  L  QA V   + +  +  E  Y++ L+V P    A+   I  C  K   LG
Sbjct: 13  QSDPNYVEELFQQADVLLFKNKNCNEAERLYQQILEVDPRNIDALN-SISYC-IKFRVLG 70

Query: 215 ---------KARQA----------FQRALQLDPENVEALVALAVMDLQANEAAGIRKGME 255
                      RQ           +Q+ L+LDP+N+E    + VM LQ  +   ++  + 
Sbjct: 71  FENEHIQNLNERQQISLYELLSPIYQQILRLDPDNIECNFNMGVMYLQ--QKQDLQGALG 128

Query: 256 KMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSY 315
             QRA          +  + N      +  + +Q  E       + P      YNL   Y
Sbjct: 129 WFQRALRRDKIIRENIKKITN----PSELAVYQQYLEL------NRPHVIKILYNLGMIY 178

Query: 316 HSKGDYEKAGLYY---MASVKEINKPHEFIFPYYGLGQVQL-----KLGDFRSALTNFEK 367
              GD  +A  YY   +A  KE N        YY            K+G  + A+    +
Sbjct: 179 DRLGDISRASNYYRYAIAKCKEDNSLQSMHQSYYAKACTNYAVSLEKMGKRQEAIDLLNQ 238

Query: 368 VLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS----S 423
           + E + +    L  LG I  + G +++AQ+    A KID        ++G    S     
Sbjct: 239 LKEEFREEIRVLNNLGIISKRHGLMQEAQQAYEDAIKIDENCFFPNYNMGVFKASHPNHE 298

Query: 424 DTGAALDAFKTARTLLKKAGEEV-PIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
               AL  F+ A  L +   E+V  I VL N+ ++H  + +   A Q  +DAL
Sbjct: 299 SDQEALKHFQKALDLARINKEDVYEINVLVNMALVHERQSQINEAIQCLQDAL 351



 Score = 41.2 bits (95), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 56/274 (20%), Positives = 113/274 (41%), Gaps = 23/274 (8%)

Query: 151  FKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 210
            +K  L  D  +  + +  A +  N G    + +++K A+++      A R G+      L
Sbjct: 1032 YKKCLTLDNKHFGSCIHLANLLANIGEGQRAAKYFKHAIRIDNDSVNA-RFGLAKT---L 1087

Query: 211  GQLGKARQA----FQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY 266
             Q  + + A    F+  LQ D  + +A   L ++ L   E     K  E +++A  +  Y
Sbjct: 1088 QQFSENKDAPIEHFEMVLQKDTSHFKAATQLGILYLDREE---YEKSAEYLKKALTVNKY 1144

Query: 267  CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGL 326
              +AL  + N  F TG      +  + AL +      +  +   L  +++      +A  
Sbjct: 1145 YPLALVSMGNLLFETGHADEAIKYHKQALVI---NEKELQALIGLGNAFYDSSQPMEAIN 1201

Query: 327  YY---MASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALG 383
            YY   +A   +++  H      Y LG     + +   A+ ++ + + + P   E+   LG
Sbjct: 1202 YYKRALAIDDQLSDVH------YNLGNALYLVENIDEAVMHYREAINLNPKKAESYYNLG 1255

Query: 384  HIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 417
            +      +   A    ++A ++DP++A A  +LG
Sbjct: 1256 NALCVKNEYPNAVNAYQQALELDPKNAPALYNLG 1289



 Score = 40.8 bits (94), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 68/346 (19%), Positives = 148/346 (42%), Gaps = 47/346 (13%)

Query: 166  LGQACVEFNRGRYSDSLEFYKRALQ-VHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRAL 224
            +G+   + +R +  ++LE++++A   + P     I + I  C  KL    ++ + +Q+AL
Sbjct: 805  IGETLYKMDRNQ--EALEYFRKASDFIKPEEDYLISMFIAKCLDKLKLYARSIEEYQKAL 862

Query: 225  QLDPE------------NVEALVALAVM--------DLQANEAAG-------IRKGMEKM 257
            QL  E            N+   +  A++        D   N+ +        I  G+E +
Sbjct: 863  QLYQEQQDEPLENSLLGNIHFRLGWAIIRNNNSLSSDKNKNDQSNPNIIENSIDMGIEHL 922

Query: 258  QRAFEIYPYCAMALNYLANHFFFTGQHFLVE-QLTETALAVTNHGPTKSHSYYNLARSYH 316
            + A E+    A  ++ LA   F          Q+ E  L +    P+    +  + + Y 
Sbjct: 923  RTANELILNNADIMHKLAGVLFKEKDESEESLQIMEKVLKII---PSNPEVHLLMGKIYD 979

Query: 317  SKGDYEKAGLYYMASVKEI-----NKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEI 371
             K ++ KA      ++K+      N+P +    ++ L Q   K  D++  + N++K L +
Sbjct: 980  KKNNHLKAIESISQAIKQFATQNPNQPPKSNL-FFLLAQSLEKQKDYKKCILNYKKCLTL 1038

Query: 372  YPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL--ISSDTGAAL 429
               +  +   L ++   +G+ ++A +  + A +ID     A   L + L   S +  A +
Sbjct: 1039 DNKHFGSCIHLANLLANIGEGQRAAKYFKHAIRIDNDSVNARFGLAKTLQQFSENKDAPI 1098

Query: 430  DAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
            + F+    +L+K  +    +    +G+++ ++ E+E + +  K AL
Sbjct: 1099 EHFE---MVLQK--DTSHFKAATQLGILYLDREEYEKSAEYLKKAL 1139


>gi|330827422|ref|XP_003291797.1| hypothetical protein DICPUDRAFT_39606 [Dictyostelium purpureum]
 gi|325077989|gb|EGC31666.1| hypothetical protein DICPUDRAFT_39606 [Dictyostelium purpureum]
          Length = 717

 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 71/275 (25%), Positives = 120/275 (43%), Gaps = 44/275 (16%)

Query: 203 IGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFE 262
           +G+  Y+ G    A ++++RAL+L+P   EAL  + V+     E   I   +E  QRA +
Sbjct: 46  MGVTFYENGDSKMALESYKRALELNPIYPEALCNVGVIYKNLGE---ILPAIEYYQRALQ 102

Query: 263 IYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYE 322
             P      NYL               L +  LA+         +Y +L      KGD  
Sbjct: 103 FNP------NYL---------------LVKNNLAI---------AYNDLGTQTKMKGDLV 132

Query: 323 KAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKAL 382
           ++  YY  S+   +K  E    YY LG +  +      A+ N+E  +    +  E L  L
Sbjct: 133 QSKRYYKKSLFYNSKHAE---TYYNLGVLNSEQRKIEKAIVNYELAIHFNSNYTEALNNL 189

Query: 383 GHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKA 442
           G IY  L  IE++    + A K +P+ +Q+  +L  +             K A+  +K A
Sbjct: 190 GVIYKDLDNIEQSIHYYQMALKSNPKFSQSLNNLAVIF------TMQGKMKEAKQQIKLA 243

Query: 443 GEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDAL 475
            +E P   E  NN+GVI+ + G+ + + +S++  +
Sbjct: 244 VKECPSYAEAYNNLGVIYRDIGKMDHSIKSYEACI 278


>gi|397665008|ref|YP_006506546.1| methyltransferase [Legionella pneumophila subsp. pneumophila]
 gi|395128419|emb|CCD06633.1| methyltransferase [Legionella pneumophila subsp. pneumophila]
          Length = 577

 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 78/343 (22%), Positives = 142/343 (41%), Gaps = 26/343 (7%)

Query: 86  LNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVE 145
           L+ LG+ Y  LG +E            A  Y+ +A +I+ ++              G+++
Sbjct: 42  LHFLGLTYAQLGDMEN-----------AILYFLQARKINPNDVGILNNLANAYKKAGQLD 90

Query: 146 QASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGL 205
           +A   ++  +E   + V A    A        Y  +L  Y  A+   P    A    +GL
Sbjct: 91  EAIKYYQQAIEIKPEYVQAHNNLAATYALLNNYQKALHHYVIAVNTEPDFSAA-HFNLGL 149

Query: 206 CRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYP 265
              K  QL  A+  F   + L+P++ EA   L ++ L+ N  +   +   K+      + 
Sbjct: 150 LLLKNQQLSAAKTQFNNVIALNPQHREAQFYLGILHLEDNLLSEAEQAFHKVLEQDHEHV 209

Query: 266 YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAG 325
              + L  +A       Q+ L       ALA+ N      +   NLA ++     +E A 
Sbjct: 210 QSLINLGVIA---LKREQNQLAVDYFTKALALDNEDIDARN---NLAATFMHHDRFENAL 263

Query: 326 LYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 385
           ++Y   +K+     E++   Y  G  Q+ LG    A   F+++L +  D+  +L  L  I
Sbjct: 264 MHYDVLLKKEPDNLEYL---YNSGVAQMALGHLNEATLLFDQILTLQSDHTPSLNNLAAI 320

Query: 386 YVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAA 428
           Y+++   E A+E L +A  I+P D      +   ++++ TGA 
Sbjct: 321 YLKMDMRETAREYLERALAINPDDV-----VSRHMLNAITGAT 358


>gi|334131406|ref|ZP_08505170.1| Tetratricopeptide TPR_2 repeat protein [Methyloversatilis
           universalis FAM5]
 gi|333443573|gb|EGK71536.1| Tetratricopeptide TPR_2 repeat protein [Methyloversatilis
           universalis FAM5]
          Length = 568

 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 73/276 (26%), Positives = 120/276 (43%), Gaps = 13/276 (4%)

Query: 135 GQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS 194
           G  L A G +++A  AF   ++A+  +   L     V+  RGR  ++L  Y RAL +   
Sbjct: 50  GSALAALGRLDEAEQAFAGAVKANPGSAELLSNLGLVQQQRGRLQEALSTYTRALAIRRD 109

Query: 195 CPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVAL-AVMDLQANEAAGIRKG 253
            P  +   +G+ +  LG+L +A  +++RA+ L P    AL  L +V+D Q      I   
Sbjct: 110 FP-ELLYNLGVVQDALGRLDEAATSYRRAIALQPRFAVALFNLGSVLDRQGARGEAI--- 165

Query: 254 MEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLAR 313
            E  +RA E  P    A + L      +G+     +  + AL +    PT + +++NL  
Sbjct: 166 -EVYRRAVEAEPGFVEAWSNLGAALQQSGEAEQAVRCYQKALDIQ---PTAT-AWFNLGT 220

Query: 314 SYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYP 373
           +  + G    A   Y    + I    E+   +  LG++    GD    L  F   L I P
Sbjct: 221 AQRAFGLIMDAAESYR---RAIALAPEYADAHSNLGEILRDQGDGEGTLAAFRAALAIDP 277

Query: 374 DNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRD 409
           D+      LG ++  L + +KA     KA  +D  D
Sbjct: 278 DHGGAHYNLGLLHHDLHEYDKALPCFEKAGVLDADD 313



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 66/130 (50%), Gaps = 8/130 (6%)

Query: 348 LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 407
           LG VQ + G  + AL+ + + L I  D  E L  LG +   LG++++A    R+A  + P
Sbjct: 83  LGLVQQQRGRLQEALSTYTRALAIRRDFPELLYNLGVVQDALGRLDEAATSYRRAIALQP 142

Query: 408 RDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFE 465
           R A A  +LG +L     GA  +A +  R    +A E  P  +E  +N+G    + GE E
Sbjct: 143 RFAVALFNLGSVL--DRQGARGEAIEVYR----RAVEAEPGFVEAWSNLGAALQQSGEAE 196

Query: 466 SAHQSFKDAL 475
            A + ++ AL
Sbjct: 197 QAVRCYQKAL 206



 Score = 46.6 bits (109), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 73/306 (23%), Positives = 130/306 (42%), Gaps = 23/306 (7%)

Query: 173 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 232
           +N GR ++++   ++    +P+    +   +G     LG+L +A QAF  A++ +P + E
Sbjct: 20  YNAGRLAEAVTAARQLAARYPAAV-VVHSVLGSALAALGRLDEAEQAFAGAVKANPGSAE 78

Query: 233 ALVALAVMDLQANEAAGIRKGMEKMQRAFEI---YPYCAMALNYLANHFFFTGQHFLVEQ 289
            L  L ++  Q      +++ +    RA  I   +P     L  + +     G+  L E 
Sbjct: 79  LLSNLGLVQQQRGR---LQEALSTYTRALAIRRDFPELLYNLGVVQDAL---GR--LDEA 130

Query: 290 LTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLG 349
            T    A+    P  + + +NL      +G   +A   Y  +V+   +P  F+  +  LG
Sbjct: 131 ATSYRRAIALQ-PRFAVALFNLGSVLDRQGARGEAIEVYRRAVEA--EPG-FVEAWSNLG 186

Query: 350 QVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRD 409
               + G+   A+  ++K L+I P        LG      G I  A E  R+A  + P  
Sbjct: 187 AALQQSGEAEQAVRCYQKALDIQPTATAWFN-LGTAQRAFGLIMDAAESYRRAIALAPEY 245

Query: 410 AQAFIDLGELLISSDTG-AALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAH 468
           A A  +LGE+L     G   L AF+ A  +    G         N+G++H +  E++ A 
Sbjct: 246 ADAHSNLGEILRDQGDGEGTLAAFRAALAIDPDHG-----GAHYNLGLLHHDLHEYDKAL 300

Query: 469 QSFKDA 474
             F+ A
Sbjct: 301 PCFEKA 306


>gi|74316213|ref|YP_313953.1| TPR repeat-containing protein [Thiobacillus denitrificans ATCC
           25259]
 gi|74055708|gb|AAZ96148.1| TPR repeat [Thiobacillus denitrificans ATCC 25259]
          Length = 931

 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 134/582 (23%), Positives = 241/582 (41%), Gaps = 90/582 (15%)

Query: 134 KGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQV-H 192
           +G+ LL + ++E+A + F+   +A   N P   G +      G  + + ++ +RAL++ H
Sbjct: 141 RGEALLNQRKLEEACNLFQQSYDASPGNPPTYWGLSRCALATGDAAKARDWLERALKLEH 200

Query: 193 PSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRK 252
                 I LG      K     KA  A+ +A++++P N++AL +L  + ++A +    R+
Sbjct: 201 KRARTWIHLGNLELAGK--DTAKALAAYSKAVKIEPNNLDALQSLVAIHVKAGDTQRARE 258

Query: 253 GMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFL-VEQLTETALAVTNHGPTKSHSYYNL 311
            +  +++   + P    A +YL     ++ + F       + AL V+   P    S    
Sbjct: 259 YLAVIRK---LAPKSTRA-HYLEASIAYSEKKFAEANAAIQEALKVS---PDHVPSLMLA 311

Query: 312 ARSYHSKGDYEKA----------------GLYYMASV----KEINKPHEFIFPYY----- 346
             S H+ G Y++A                GL  +A+     K+ +K    + P+      
Sbjct: 312 GMSAHALGSYQEAETYFKRFLLRVPGHAEGLKMLATTQIKSKQFDKALVTLAPFLAPGVR 371

Query: 347 ---GL---GQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLR 400
              GL   G+ Q+  G+   A   FE+ L + P N      LG   +  G  + A + L 
Sbjct: 372 DAQGLALAGEAQMANGNPSQAAALFERALALEPGNVTIRTQLGLSQLAAGNTQDAIDELT 431

Query: 401 KAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHF 459
            A++     +QA   L    +S  D   AL A  T    L+K G+    ++ +  G  + 
Sbjct: 432 DASQ-HSSGSQADTLLAVAYLSRKDYDRALAALAT----LQKKGD-ASAKIHHLAGQAYL 485

Query: 460 EKGEFESAHQSFKDALG-DGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHV 518
            K +  +A ++F+ AL  D  +   + S  +  V +  A   +   M+L      D N  
Sbjct: 486 GKNDKLAARRNFEQALAADAAFFPAVASLAQLDVAENKADAAR---MRLERALAQDKN-- 540

Query: 519 ELPWNKVTVLFNLARL-------------LEQIHDTVAASVLYRLILFKYQDYVDAYLRL 565
                +V  +  L+R+             LE+       ++  R+ L ++      YL  
Sbjct: 541 -----RVAAMLALSRMAARNGQEQASIDWLEKAARADGKAIQPRIELVRH------YL-- 587

Query: 566 AAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF----RAASD 621
                ARN  Q ++ L NEA++ N  +P AL++LG ++L  DD   +  TF    R    
Sbjct: 588 -----ARNEGQKALALANEAVRANPDHPAALNLLGTVQLALDDKASSASTFSRLTRETRQ 642

Query: 622 ATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKEL 663
           + +G    A + L +     A RN   A +L   HL+  + L
Sbjct: 643 SPEGFVRLAQVQLADGKLDEARRNLLHALELAPGHLKSQEAL 684


>gi|166368636|ref|YP_001660909.1| glycosyl transferase family protein [Microcystis aeruginosa
           NIES-843]
 gi|166091009|dbj|BAG05717.1| probable glycosyl transferase [Microcystis aeruginosa NIES-843]
          Length = 562

 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 74/297 (24%), Positives = 134/297 (45%), Gaps = 27/297 (9%)

Query: 134 KGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHP 193
           +G  LLA GE E A SA++ VL    ++  A +  A V  ++ RYS++L+ Y  A  V+ 
Sbjct: 44  QGDQLLAAGEKESALSAYRTVLSFHENSAQAHIKIAQVLQSQKRYSEALQAYNHAFIVND 103

Query: 194 SCPGAIR-----LGIGLCRYKLGQLGKARQAFQRALQLDPE-NVEALVALAVMDLQA-NE 246
             P         + +G    +  +  +A  A+Q+A+ + P    +  +  A+  LQ  +E
Sbjct: 104 KPPMEPSQRNYLVALGDIFAQEEKWSEALDAYQKAMIIKPTFKAQFQLGKALYSLQRWDE 163

Query: 247 AAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG----P 302
           AA      + +Q A  + P    A       +F+ G+ +  +QL   A           P
Sbjct: 164 AA------KALQAAVFLDPSQGKA-------YFYLGKAYSEQQLWPEASYAYQQALELIP 210

Query: 303 TKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSAL 362
           ++  +Y  L  +   +G +++A   Y  ++    K  +    Y  LG+   + G    A+
Sbjct: 211 SQGETYKKLGETLAKQGKWQEAEQIYRQALIYTPKDGDI---YNYLGKALAEQGKLGEAM 267

Query: 363 TNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGEL 419
             F++  +I P N E  + L +IY+  GQI++     R+A +IDP  ++    L E+
Sbjct: 268 AVFQQARQISPKNAEIYENLCYIYINSGQIDEGLNWCRQAVEIDPNLSEVRFILQEI 324


>gi|193216265|ref|YP_001997464.1| tetratricopeptide domain-containing protein [Chloroherpeton
           thalassium ATCC 35110]
 gi|193089742|gb|ACF15017.1| Tetratricopeptide TPR_2 repeat protein [Chloroherpeton thalassium
           ATCC 35110]
          Length = 365

 Score = 66.2 bits (160), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 17/205 (8%)

Query: 278 FFFTGQHFLVEQLTETALAVTNHG----PTKSHSYYNLARSYHSKGDYEKA--GLYYMAS 331
           FF  G  + + Q  + A+    +     P  +  YYNL  +Y+  G++  A     Y+  
Sbjct: 82  FFNLGSAYYMMQAYDDAINAYIYAVKISPNYAEGYYNLGLAYYQSGNFYSAKDAFAYVVE 141

Query: 332 VKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQ 391
           ++  +        YY LG+  +++G  +SA+  ++K  ++ P+  +    LG  Y +L Q
Sbjct: 142 LRAGDSD-----AYYNLGKACVRIGLDKSAVDAYQKAADLDPNFIDAYYNLGLSYKRLEQ 196

Query: 392 IEKAQELLRKAAKIDPRDAQAFIDLGELL-ISSDTGAALDAFKTARTLLKKAGEEVPIEV 450
            +KA   L KA +I   D   F  LGE    + D   A+ AF+ A  L        P E+
Sbjct: 197 YDKAVAALNKAVQIGANDPAIFFSLGECYQGAGDNNQAIVAFQNAFKL----NSNDP-EI 251

Query: 451 LNNIGVIHFEKGEFESAHQSFKDAL 475
           L  IGV H    E++ A ++F  AL
Sbjct: 252 LYQIGVSHVNLEEYDQAIRAFGSAL 276



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 77/339 (22%), Positives = 141/339 (41%), Gaps = 49/339 (14%)

Query: 122 RIDMHEPST----WVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGR 177
           RI   EP      ++  G+L     + E+A+    ++ EA     P   G+A   FN G 
Sbjct: 36  RIMEMEPEKAAREFIRLGELYFKHKKYEKAA----VLFEAATTKNPT--GKAF--FNLGS 87

Query: 178 -------YSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPEN 230
                  Y D++  Y  A+++ P+        +GL  Y+ G    A+ AF   ++L   +
Sbjct: 88  AYYMMQAYDDAINAYIYAVKISPNYAEGY-YNLGLAYYQSGNFYSAKDAFAYVVELRAGD 146

Query: 231 VEALVALAVMDLQANEAAGIRKGMEK-----MQRAFEIYPYCAMALNYLANHFFFTGQHF 285
            +A   L          A +R G++K      Q+A ++ P      N++  ++     + 
Sbjct: 147 SDAYYNLG--------KACVRIGLDKSAVDAYQKAADLDP------NFIDAYYNLGLSYK 192

Query: 286 LVEQLTETALAVTNH----GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEF 341
            +EQ  + A+A  N     G      +++L   Y   GD  +A + +  + K  +   E 
Sbjct: 193 RLEQY-DKAVAALNKAVQIGANDPAIFFSLGECYQGAGDNNQAIVAFQNAFKLNSNDPEI 251

Query: 342 IFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRK 401
           +   Y +G   + L ++  A+  F   L +  D  E    LG IY +  + + A     +
Sbjct: 252 L---YQIGVSHVNLEEYDQAIRAFGSALRMNKDFAECYYNLGIIYTKTHKYQNALYAYEQ 308

Query: 402 AAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLK 440
             +I P +  A+ +LG   I++  G    A +T ++LLK
Sbjct: 309 VVRIQPENRTAYYNLGVAYINA--GDTESARRTYKSLLK 345


>gi|425447216|ref|ZP_18827207.1| exported hypothetical protein [Microcystis aeruginosa PCC 9443]
 gi|389732284|emb|CCI03758.1| exported hypothetical protein [Microcystis aeruginosa PCC 9443]
          Length = 605

 Score = 66.2 bits (160), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 71/303 (23%), Positives = 129/303 (42%), Gaps = 32/303 (10%)

Query: 117 YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 176
           Y KA  I+      +  +G + L   + E+A +     +E +     A   +  V +   
Sbjct: 306 YTKAIEINPQYAEAYKNRGIVYLYLKDYEKAMADNNKAIEINPQYSNAYNNRGNVYYKLK 365

Query: 177 RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV- 235
            Y  ++  Y +A++++P    A     G   Y L +  KA   + + ++++P++ EA   
Sbjct: 366 EYDKAMADYNKAIEINPQLFQAYD-NRGSFYYNLKEYDKAIADYNKVIEINPQDAEAYYK 424

Query: 236 -ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETA 294
                 DL+  E     K ++   +A EI P  A       + ++  G  + + +  + A
Sbjct: 425 RGYVYYDLKDYE-----KAIKDYNKAIEINPQNA-------DSYYLRGSFYYILKEYDKA 472

Query: 295 LAVTNHG----PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFP-----Y 345
           +   N      P  + +Y N    YH+  +Y+KA       +K+ NK  E I P     Y
Sbjct: 473 IKDYNKAIEINPQNAIAYNNRGYVYHNLKEYDKA-------IKDYNKALE-INPQYADAY 524

Query: 346 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKI 405
           Y  G V L L ++  A+ ++ K +EI P   +     G +Y  L   EKA +   KA +I
Sbjct: 525 YTRGNVYLHLKEYDKAIKDYNKAIEINPQYADAYNNRGVVYEILKDYEKAIKDYNKALEI 584

Query: 406 DPR 408
           +P+
Sbjct: 585 NPQ 587



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 76/313 (24%), Positives = 133/313 (42%), Gaps = 36/313 (11%)

Query: 174 NRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEA 233
           N  +Y  ++  Y +A++++P    A +   G+    L    KA     +A++++P+   A
Sbjct: 295 NNNQYDKAIAAYTKAIEINPQYAEAYK-NRGIVYLYLKDYEKAMADNNKAIEINPQYSNA 353

Query: 234 LVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTET 293
                 +  +  E     K M    +A EI P    A +   + F++  + +      + 
Sbjct: 354 YNNRGNVYYKLKE---YDKAMADYNKAIEINPQLFQAYDNRGS-FYYNLKEY------DK 403

Query: 294 ALAVTNH----GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFP----- 344
           A+A  N      P  + +YY     Y+   DYEKA       +K+ NK  E I P     
Sbjct: 404 AIADYNKVIEINPQDAEAYYKRGYVYYDLKDYEKA-------IKDYNKAIE-INPQNADS 455

Query: 345 YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAK 404
           YY  G     L ++  A+ ++ K +EI P N       G++Y  L + +KA +   KA +
Sbjct: 456 YYLRGSFYYILKEYDKAIKDYNKAIEINPQNAIAYNNRGYVYHNLKEYDKAIKDYNKALE 515

Query: 405 IDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKG 462
           I+P+ A A+   G + +       L  +  A     KA E  P   +  NN GV++    
Sbjct: 516 INPQYADAYYTRGNVYLH------LKEYDKAIKDYNKAIEINPQYADAYNNRGVVYEILK 569

Query: 463 EFESAHQSFKDAL 475
           ++E A + +  AL
Sbjct: 570 DYEKAIKDYNKAL 582



 Score = 44.3 bits (103), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 63/301 (20%), Positives = 120/301 (39%), Gaps = 22/301 (7%)

Query: 303 TKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSAL 362
           T + +Y+     Y +   Y+KA   Y  ++ EIN   ++   Y   G V L L D+  A+
Sbjct: 281 TTAETYFKQGEDYRNNNQYDKAIAAYTKAI-EINP--QYAEAYKNRGIVYLYLKDYEKAM 337

Query: 363 TNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS 422
            +  K +EI P         G++Y +L + +KA     KA +I+P+  QA+ + G    +
Sbjct: 338 ADNNKAIEINPQYSNAYNNRGNVYYKLKEYDKAMADYNKAIEINPQLFQAYDNRGSFYYN 397

Query: 423 SDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDALGDGIW 480
                 L  +  A     K  E  P   E     G ++++  ++E A + +  A+     
Sbjct: 398 ------LKEYDKAIADYNKVIEINPQDAEAYYKRGYVYYDLKDYEKAIKDYNKAI----- 446

Query: 481 LTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNH-VELPWNKVTVLFNLARLLEQIH 539
             +      +Y +  S   +    ++ + +   D N  +E+         N   +   + 
Sbjct: 447 -EINPQNADSYYLRGSFYYI----LKEYDKAIKDYNKAIEINPQNAIAYNNRGYVYHNLK 501

Query: 540 DTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSML 599
           +   A   Y   L     Y DAY     +         +I+  N+A+++N +Y +A +  
Sbjct: 502 EYDKAIKDYNKALEINPQYADAYYTRGNVYLHLKEYDKAIKDYNKAIEINPQYADAYNNR 561

Query: 600 G 600
           G
Sbjct: 562 G 562


>gi|443647798|ref|ZP_21129780.1| trypsin family protein [Microcystis aeruginosa DIANCHI905]
 gi|159028723|emb|CAO88195.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
 gi|443335400|gb|ELS49873.1| trypsin family protein [Microcystis aeruginosa DIANCHI905]
          Length = 565

 Score = 66.2 bits (160), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 75/297 (25%), Positives = 135/297 (45%), Gaps = 27/297 (9%)

Query: 134 KGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHP 193
           +G  LLA G+ E A SA++ VL  D ++V A +  A V  ++ RYS++L+ Y R   V+ 
Sbjct: 44  QGDRLLAAGDKESALSAYRTVLSFDENSVQAHIKIAQVLQSQKRYSEALQAYDRGFIVND 103

Query: 194 SCP-----GAIRLGIGLCRYKLGQLGKARQAFQRALQLDPE-NVEALVALAVMDLQA-NE 246
             P         + +G    +  +  +A  A+++A+ + P    +  +  A+  LQ  +E
Sbjct: 104 KPPMEPSQSNYLVALGDIFAQEEKWSEAIDAYRKAMIIKPTFKAQFQLGKALYSLQRWDE 163

Query: 247 AAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG----P 302
           AA      + +Q A  + P    A       +F+ G+ +  +QL   A           P
Sbjct: 164 AA------KALQAAVFLDPTQGKA-------YFYLGKAYSEQQLWPEASYAYQQALELIP 210

Query: 303 TKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSAL 362
            +   Y  L  +   +G +E+A   Y  ++    K  +    Y  LG+   + G    A+
Sbjct: 211 NQGEIYKKLGEALVKQGKWEEAEQIYRQALIYAPKDGDI---YNYLGKALAEQGKLGEAM 267

Query: 363 TNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGEL 419
             F++  +I P N +  + L +IY+  GQI++     R+A +IDP  ++A   L E+
Sbjct: 268 AVFQQARQISPKNAKIYQNLCYIYINNGQIDEGLNWCRQAVEIDPNLSEARFILQEI 324


>gi|434399045|ref|YP_007133049.1| Tetratricopeptide TPR_1 repeat-containing protein [Stanieria
           cyanosphaera PCC 7437]
 gi|428270142|gb|AFZ36083.1| Tetratricopeptide TPR_1 repeat-containing protein [Stanieria
           cyanosphaera PCC 7437]
          Length = 723

 Score = 66.2 bits (160), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 88/375 (23%), Positives = 154/375 (41%), Gaps = 37/375 (9%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
           A   YN+   +   + + W+    +L   G +E+A  ++   LE   D+  A   +  V 
Sbjct: 164 AIASYNRVIELKPDDATVWLNHSNVLTNLGRLEEAVVSYNRALELKPDDANAWYNRGNVL 223

Query: 173 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 232
            + GR ++++  Y RAL++ P    A     G     LG+L +A  ++ RAL+L P +  
Sbjct: 224 NDLGRLNEAVANYDRALELKPDDATAW-FKRGNVLNDLGRLEEAVVSYNRALELKPNDA- 281

Query: 233 ALVALAVMDLQANEAAGIR------KGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFL 286
                   ++  N   G++      + +   +RA ++ P  A A       +F  G   L
Sbjct: 282 --------NIWFNHGIGLKNLGRLEEAVASYERAIKLKPNDASA-------WFNRGNALL 326

Query: 287 VEQLTETALAVTNHG----PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFI 342
             +  E A+A  +      P  +  ++N   +  + G  ++A   Y  S+ E+       
Sbjct: 327 KLKCDEEAIASYDRSIELKPDDATVWHNRGIALKNLGRLKEAVASYDRSI-ELKSDDASA 385

Query: 343 FPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKA 402
           +   G+    LK  +   AL + ++ LEI P+  E     G     L ++E+A     + 
Sbjct: 386 WHNRGIALNDLKRHE--EALASCDRALEINPNYVEAWFERGKTLDNLNRLEEAVTSYERV 443

Query: 403 AKIDPRDAQAFIDLGELLIS--SDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFE 460
            K+ P  A A +  G LL         AL  F  A   LK A E   + V   + +I+  
Sbjct: 444 IKLQPDHALALLYQGALLCDYLQRYEEALTNFNQA---LKFAPENPNVWVNRGVALINLN 500

Query: 461 KGEFESAHQSFKDAL 475
           +   E A  S+K AL
Sbjct: 501 R--LEEAVASYKRAL 513



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 78/347 (22%), Positives = 143/347 (41%), Gaps = 28/347 (8%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
           A   Y+++  +   + S W  +G  L      E+A ++    LE + + V A   +    
Sbjct: 368 AVASYDRSIELKSDDASAWHNRGIALNDLKRHEEALASCDRALEINPNYVEAWFERGKTL 427

Query: 173 FNRGRYSDSLEFYKRALQVHPSCPGAIRL-GIGLCRYKLGQLGKARQAFQRALQLDPENV 231
            N  R  +++  Y+R +++ P    A+   G  LC Y L +  +A   F +AL+  PEN 
Sbjct: 428 DNLNRLEEAVTSYERVIKLQPDHALALLYQGALLCDY-LQRYEEALTNFNQALKFAPENP 486

Query: 232 EALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLT 291
              V   V  +  N    + + +   +RA E+ P           H + +    L + L 
Sbjct: 487 NVWVNRGVALINLNR---LEEAVASYKRALELQPKNP--------HAWLSQGALLCDYLQ 535

Query: 292 ETALAVTNH------GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK-EINKPHEFIFP 344
               A+TN        P   + + N   +  +    E+A   Y  +++ +   PH ++  
Sbjct: 536 RYEEALTNFNQALKFAPENPNVWVNRGVALINLNRLEEAVASYKRALELQPKNPHAWLSQ 595

Query: 345 YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAK 404
              L      L  +  ALT+FE+V+E+ P+N       G   + L ++E A     +A +
Sbjct: 596 GALLCDY---LQRYEEALTSFERVIELQPNNVNAWVNRGVALINLDRLEAALASYDRALE 652

Query: 405 IDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVL 451
           + P +  A+++ G LL        L  ++ A T  ++A E  P   L
Sbjct: 653 LQPNNVNAWLNKGALLCDR-----LQRYEEALTNFERAIELQPNNAL 694



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 96/440 (21%), Positives = 176/440 (40%), Gaps = 46/440 (10%)

Query: 47  AREYFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAIL--NALGVYYTYLGKIETKQR 104
           A  +FK+G V      LEE          A V Y R   L  N   +++ +   ++   R
Sbjct: 247 ATAWFKRGNVLNDLGRLEE----------AVVSYNRALELKPNDANIWFNHGIGLKNLGR 296

Query: 105 EKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPA 164
            +E     A   Y +A ++  ++ S W  +G  LL     E+A +++   +E   D+   
Sbjct: 297 LEE-----AVASYERAIKLKPNDASAWFNRGNALLKLKCDEEAIASYDRSIELKPDDATV 351

Query: 165 LLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRAL 224
              +     N GR  +++  Y R++++      A     G+    L +  +A  +  RAL
Sbjct: 352 WHNRGIALKNLGRLKEAVASYDRSIELKSDDASAWH-NRGIALNDLKRHEEALASCDRAL 410

Query: 225 QLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQH 284
           +++P  VEA           N    + + +   +R  ++ P  A+AL        + G  
Sbjct: 411 EINPNYVEAWFERGKTLDNLNR---LEEAVTSYERVIKLQPDHALAL-------LYQGA- 459

Query: 285 FLVEQLTETALAVTN------HGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK-EINK 337
            L + L     A+TN        P   + + N   +  +    E+A   Y  +++ +   
Sbjct: 460 LLCDYLQRYEEALTNFNQALKFAPENPNVWVNRGVALINLNRLEEAVASYKRALELQPKN 519

Query: 338 PHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQE 397
           PH ++     L      L  +  ALTNF + L+  P+N       G   + L ++E+A  
Sbjct: 520 PHAWLSQGALLCDY---LQRYEEALTNFNQALKFAPENPNVWVNRGVALINLNRLEEAVA 576

Query: 398 LLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIG 455
             ++A ++ P++  A++  G LL        L  ++ A T  ++  E  P  +    N G
Sbjct: 577 SYKRALELQPKNPHAWLSQGALLCDY-----LQRYEEALTSFERVIELQPNNVNAWVNRG 631

Query: 456 VIHFEKGEFESAHQSFKDAL 475
           V        E+A  S+  AL
Sbjct: 632 VALINLDRLEAALASYDRAL 651



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 59/275 (21%), Positives = 124/275 (45%), Gaps = 14/275 (5%)

Query: 145 EQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIG 204
           E+A +++   +E   D+  A   +A    N GR ++++  Y RA+++ P    A     G
Sbjct: 26  EEALASYDRAIELKPDDANAWYNRAITLSNLGRLNEAVANYDRAIELQPDDATAW-YNRG 84

Query: 205 LCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIY 264
                LG+L +A  ++  A++L   N +   A     +       + + +   +RA ++ 
Sbjct: 85  NALDDLGRLEEALASYNHAIEL---NSDLAFAWHNRGIALRNLGRLEEALASCERATKLA 141

Query: 265 PYCAMALNYLANHFFFTGQHFL--VEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYE 322
           P      +++ ++  +T  H L  +++   +   V    P  +  + N +    + G  E
Sbjct: 142 P----EFDFIWHNHGYT-LHLLGRLQEAIASYNRVIELKPDDATVWLNHSNVLTNLGRLE 196

Query: 323 KAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKAL 382
           +A + Y  +++   KP +    +Y  G V   LG    A+ N+++ LE+ PD+       
Sbjct: 197 EAVVSYNRALEL--KPDD-ANAWYNRGNVLNDLGRLNEAVANYDRALELKPDDATAWFKR 253

Query: 383 GHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 417
           G++   LG++E+A     +A ++ P DA  + + G
Sbjct: 254 GNVLNDLGRLEEAVVSYNRALELKPNDANIWFNHG 288



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 64/309 (20%), Positives = 125/309 (40%), Gaps = 44/309 (14%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
           A   Y++A  +   + + W  +G  L   G +E+A +++   +E + D   A   +    
Sbjct: 62  AVANYDRAIELQPDDATAWYNRGNALDDLGRLEEALASYNHAIELNSDLAFAWHNRGIAL 121

Query: 173 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 232
            N GR  ++L   +RA ++ P     I    G   + LG+L +A  ++ R ++L P+  +
Sbjct: 122 RNLGRLEEALASCERATKLAPEF-DFIWHNHGYTLHLLGRLQEAIASYNRVIELKPD--D 178

Query: 233 ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTE 292
           A V L   ++  N    + + +    RA E+                             
Sbjct: 179 ATVWLNHSNVLTN-LGRLEEAVVSYNRALEL----------------------------- 208

Query: 293 TALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQ 352
                    P  ++++YN     +  G   +A   Y  +++   KP +    ++  G V 
Sbjct: 209 --------KPDDANAWYNRGNVLNDLGRLNEAVANYDRALEL--KPDDAT-AWFKRGNVL 257

Query: 353 LKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQA 412
             LG    A+ ++ + LE+ P++       G     LG++E+A     +A K+ P DA A
Sbjct: 258 NDLGRLEEAVVSYNRALELKPNDANIWFNHGIGLKNLGRLEEAVASYERAIKLKPNDASA 317

Query: 413 FIDLGELLI 421
           + + G  L+
Sbjct: 318 WFNRGNALL 326



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 50/211 (23%), Positives = 94/211 (44%), Gaps = 19/211 (9%)

Query: 215 KARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYL 274
           +A  ++ RA++L P++  A    A+     +    + + +    RA E+ P  A A    
Sbjct: 27  EALASYDRAIELKPDDANAWYNRAIT---LSNLGRLNEAVANYDRAIELQPDDATAWYNR 83

Query: 275 ANHFFFTGQHFLVEQLTETALAVTNHG----PTKSHSYYNLARSYHSKGDYEKAGLYYMA 330
            N     G+        E ALA  NH        + +++N   +  + G  E+A    +A
Sbjct: 84  GNALDDLGR-------LEEALASYNHAIELNSDLAFAWHNRGIALRNLGRLEEA----LA 132

Query: 331 SVKEINK-PHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQL 389
           S +   K   EF F ++  G     LG  + A+ ++ +V+E+ PD+        ++   L
Sbjct: 133 SCERATKLAPEFDFIWHNHGYTLHLLGRLQEAIASYNRVIELKPDDATVWLNHSNVLTNL 192

Query: 390 GQIEKAQELLRKAAKIDPRDAQAFIDLGELL 420
           G++E+A     +A ++ P DA A+ + G +L
Sbjct: 193 GRLEEAVVSYNRALELKPDDANAWYNRGNVL 223


>gi|292620687|ref|XP_001921543.2| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit isoform
           1 [Danio rerio]
          Length = 1102

 Score = 66.2 bits (160), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 103/479 (21%), Positives = 187/479 (39%), Gaps = 29/479 (6%)

Query: 142 GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 201
           G+ E A      +   + DN   LL  + + F   R   S +F   A + +P    A   
Sbjct: 91  GDFEAAEHHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDMSFQFSTLATKQNPMLAEAYS- 149

Query: 202 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 261
            +G    + GQL +A + +++AL+L P+ ++  + LA   + A +  G    ++    A 
Sbjct: 150 NLGNVHKERGQLQEAIERYRQALRLKPDFIDGYINLAAALVAAGDMEG---AVQAYVSAL 206

Query: 262 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 319
              P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G
Sbjct: 207 HCNPDLYCVRS--DLGNLLKALGR---LEEAKRCYLKAIETQPNFAVAWSNLGCVFNAQG 261

Query: 320 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 379
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++    
Sbjct: 262 EIWLAIHHFE---KAVTLDASFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVH 318

Query: 380 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLI-SSDTGAALDAFKTARTL 438
             L  +Y + G I+ A +  R A ++ P    A+ +L   +    +   A + + TA  L
Sbjct: 319 GNLACVYYEQGLIDLAIDTYRHAIELQPHFPDAYCNLANAMKEKCNVSEAEECYNTALRL 378

Query: 439 LKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASAS 498
                +      LNN+  I  E+G  E A Q ++ AL       +       +   AS  
Sbjct: 379 CPTHADS-----LNNLANIKREQGNIEEAVQLYRKAL------EVFPDFAAAHSNLASVL 427

Query: 499 MLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDY 558
             Q K  +    +E     + +         N+   L+++ D   A   Y   +     +
Sbjct: 428 QQQGKLQEALMHYEEA---IRISPTFADAYSNMGNTLKEMQDIQGALRCYTRAIQINPAF 484

Query: 559 VDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFR 617
            DA+  LA+I K   N+  +I     ALK+   +P+A   L        DW    E  +
Sbjct: 485 ADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMK 543



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 86/391 (21%), Positives = 162/391 (41%), Gaps = 34/391 (8%)

Query: 93  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 152
           Y+ LG +  ++ + +E    A + Y +A R+       ++     L+A G++E A  A+ 
Sbjct: 148 YSNLGNVHKERGQLQE----AIERYRQALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 203

Query: 153 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 210
             L  + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 204 SALHCNPDLYCVRSDLGNLLKAL--GRLEEAKRCYLKAIETQPNFAVAWS-NLGCVFNAQ 260

Query: 211 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 270
           G++  A   F++A+ LD   ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 261 GEIWLAIHHFEKAVTLDASFLDAYINLGNV---LKEARIFDRAVAAYLRALSLSPNHAVV 317

Query: 271 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 330
              LA  ++  G   L       A+ +  H P    +Y NLA +   K +  +A   Y  
Sbjct: 318 HGNLACVYYEQGLIDLAIDTYRHAIELQPHFPD---AYCNLANAMKEKCNVSEAEECYNT 374

Query: 331 SVKEINKPHEFIFPYYG-----LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 385
           +++        + P +      L  ++ + G+   A+  + K LE++PD       L  +
Sbjct: 375 ALR--------LCPTHADSLNNLANIKREQGNIEEAVQLYRKALEVFPDFAAAHSNLASV 426

Query: 386 YVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGE 444
             Q G++++A     +A +I P  A A+ ++G  L    D   AL  +  A  +      
Sbjct: 427 LQQQGKLQEALMHYEEAIRISPTFADAYSNMGNTLKEMQDIQGALRCYTRAIQINPAFA- 485

Query: 445 EVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
               +  +N+  IH + G    A  S++ AL
Sbjct: 486 ----DAHSNLASIHKDSGNIPEAIASYRTAL 512


>gi|410671866|ref|YP_006924237.1| hypothetical protein Mpsy_2668 [Methanolobus psychrophilus R15]
 gi|409170994|gb|AFV24869.1| hypothetical protein Mpsy_2668 [Methanolobus psychrophilus R15]
          Length = 368

 Score = 66.2 bits (160), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 85/373 (22%), Positives = 160/373 (42%), Gaps = 41/373 (10%)

Query: 51  FKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHF 110
           F  G +E+ +Q+L  G       Y +++ YE IA ++ + V   Y   I+    + E  +
Sbjct: 17  FSAGCIEEEQQVLNTGEL-----YRSNMYYEAIASVDNIQVDDPYY--IDALNYKGESLY 69

Query: 111 IL-----ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPAL 165
            L     A   YN+   +D      WV KG  LL   E ++A + +   +EAD +   A 
Sbjct: 70  ALSRYNEAIGCYNEVIEMDPENSKAWVNKGDSLLEIYEYDEADACYGRAIEADPEFDEAW 129

Query: 166 LGQACVEFNRGRYSDSLEFYKRALQVH----PSCPGAIR--LGIGLCRYKLGQLGKARQA 219
            G+    +  G Y++S EF++++++       S P +       G+    +G+  ++ + 
Sbjct: 130 SGKGITLYLNGSYNESAEFFEKSIEYSDKKITSDPDSFEAWYNKGISFSYIGRTNESLEC 189

Query: 220 FQRALQLDPENVEA-------LVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALN 272
           +++A++L+PE   A       L+ L   D          + ++    A EI P  A A  
Sbjct: 190 YEKAIELNPEYANAWRGKGYELIELGRYD----------EAIQCYDNAIEINPEDAYA-- 237

Query: 273 YLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASV 332
           ++   +         E +     A+  H P  ++++ N          Y++A   Y   V
Sbjct: 238 WVGKGYVLYKFDRYDEAIKCFDKAIEIH-PEDAYAWGNKGYMLGILERYDEAIECY-DKV 295

Query: 333 KEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQI 392
            EI+   EF   +   G    KLG +  A+  ++  +EI P+  +  +  G    +LG+ 
Sbjct: 296 IEIDP--EFTSAWKEKGYALYKLGRYDEAIQCYDNAIEINPEYADAWEGKGDALNELGRS 353

Query: 393 EKAQELLRKAAKI 405
           ++A E  +KA K+
Sbjct: 354 DEANECYKKAEKL 366



 Score = 47.4 bits (111), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 57/280 (20%), Positives = 117/280 (41%), Gaps = 22/280 (7%)

Query: 204 GLCRYKLGQLGKARQAFQRALQLDPENVEALV--ALAVMDLQANEAAGIRKGMEKMQRAF 261
           G   Y L +  +A   +   +++DPEN +A V    +++++   + A    G     RA 
Sbjct: 65  GESLYALSRYNEAIGCYNEVIEMDPENSKAWVNKGDSLLEIYEYDEADACYG-----RAI 119

Query: 262 EIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTN----HGPTKSHSYYNLARSYHS 317
           E  P    A +      +  G +    +  E ++  ++      P    ++YN   S+  
Sbjct: 120 EADPEFDEAWSGKGITLYLNGSYNESAEFFEKSIEYSDKKITSDPDSFEAWYNKGISFSY 179

Query: 318 KGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCE 377
            G   ++   Y  ++ E+N   E+   + G G   ++LG +  A+  ++  +EI P++  
Sbjct: 180 IGRTNESLECYEKAI-ELNP--EYANAWRGKGYELIELGRYDEAIQCYDNAIEINPEDAY 236

Query: 378 TLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTART 437
                G++  +  + ++A +   KA +I P DA A+ + G +L        L+ +  A  
Sbjct: 237 AWVGKGYVLYKFDRYDEAIKCFDKAIEIHPEDAYAWGNKGYML------GILERYDEAIE 290

Query: 438 LLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDAL 475
              K  E  P         G   ++ G ++ A Q + +A+
Sbjct: 291 CYDKVIEIDPEFTSAWKEKGYALYKLGRYDEAIQCYDNAI 330


>gi|19705092|ref|NP_602587.1| hypothetical protein [Fusobacterium nucleatum subsp. nucleatum ATCC
           25586]
 gi|19713016|gb|AAL93886.1| Tetratricopeptide repeat family protein [Fusobacterium nucleatum
           subsp. nucleatum ATCC 25586]
          Length = 628

 Score = 66.2 bits (160), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 66/291 (22%), Positives = 124/291 (42%), Gaps = 24/291 (8%)

Query: 133 GKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVH 192
           G    LL K   E+A + +   +E + +N      +AC  +   +Y  ++E Y +A++++
Sbjct: 34  GLSYFLLKK--YEEAINDYNRAIELNLNNASYYYNRACSYYCSNKYDKAIEDYDKAIKLN 91

Query: 193 PS--CPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGI 250
           P+  C    R   G   + L +  +A + + +A++LDP N              N+    
Sbjct: 92  PNDACYFNNR---GHSYFALNKYSEAIEDYDKAIKLDPNNASYYYKRGFSYYALNK---Y 145

Query: 251 RKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG----PTKSH 306
            K +E   +A ++ P  A        +F   G  +  E+    ++   N      P  + 
Sbjct: 146 DKAIEDYNKAIKLDPNNAA-------YFSSRGDIYYYEKAYNKSIEDYNKAIKLDPNNAF 198

Query: 307 SYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFE 366
            Y N   +Y     Y++A   Y  ++K +N  + F    Y  G    KL  ++ A+ +++
Sbjct: 199 YYDNRGLAYEKLKKYKEAINDYNKAIK-LNPNNAFYC--YNRGFTYNKLKKYKEAINDYD 255

Query: 367 KVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 417
           K +++ P+N       G  Y  LG+  KA E   KA K++P    A+ + G
Sbjct: 256 KAIKLDPNNASYFNNRGVAYNNLGEYSKALEDYDKAIKLNPNYTFAYNNKG 306



 Score = 48.1 bits (113), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 57/112 (50%), Gaps = 3/112 (2%)

Query: 308 YYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEK 367
           YYN A SY+    Y+KA   Y  ++K +N P++  + +   G     L  +  A+ +++K
Sbjct: 64  YYNRACSYYCSNKYDKAIEDYDKAIK-LN-PNDACY-FNNRGHSYFALNKYSEAIEDYDK 120

Query: 368 VLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGEL 419
            +++ P+N       G  Y  L + +KA E   KA K+DP +A  F   G++
Sbjct: 121 AIKLDPNNASYYYKRGFSYYALNKYDKAIEDYNKAIKLDPNNAAYFSSRGDI 172


>gi|17231874|ref|NP_488422.1| hypothetical protein all4382 [Nostoc sp. PCC 7120]
 gi|17133518|dbj|BAB76081.1| all4382 [Nostoc sp. PCC 7120]
          Length = 311

 Score = 66.2 bits (160), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 69/264 (26%), Positives = 109/264 (41%), Gaps = 30/264 (11%)

Query: 152 KIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLG 211
           K++ +      P LL Q       GR  D++  ++ A+Q+ P+   A    +GL   + G
Sbjct: 35  KLLAQYSLPTAPTLLNQGLQAIQAGRLQDAIAAFQSAIQLDPNL-AAAHYNLGLALRQTG 93

Query: 212 QLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMAL 271
           QL  A  AF RA Q DP    A   L    L+ N    +++  + +QRA E+ P    A 
Sbjct: 94  QLQPAADAFYRATQSDPNFALAFANLGGSLLEGNN---LQQANDYLQRALELEPRLGFA- 149

Query: 272 NYLANHFFFTGQHFLVEQLTET----------ALAVTNHGPTKSHSYYNLARSYHSKGDY 321
                H+       LV Q  +           A+ ++ + P     +Y L  SY  +G  
Sbjct: 150 -----HYNLG----LVRQQQQNWEGAIASFQKAVELSKNAP---EPHYYLGISYLQQGKL 197

Query: 322 EKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKA 381
            +A   +  ++K IN    +   YY LG V    G  + ALT F K  E  P+       
Sbjct: 198 NEAKNAFNQAIK-INP--RYSEAYYNLGVVLFNQGQPQEALTAFRKSAEANPNYPNAYYG 254

Query: 382 LGHIYVQLGQIEKAQELLRKAAKI 405
            G ++ QL Q  +A ++   A  +
Sbjct: 255 AGLVFTQLNQYGEAAKVFNHAKNL 278



 Score = 52.8 bits (125), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 50/193 (25%), Positives = 94/193 (48%), Gaps = 7/193 (3%)

Query: 242 LQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG 301
           LQA +A  ++  +   Q A ++ P  A A   L      TGQ   ++   +     T   
Sbjct: 53  LQAIQAGRLQDAIAAFQSAIQLDPNLAAAHYNLGLALRQTGQ---LQPAADAFYRATQSD 109

Query: 302 PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSA 361
           P  + ++ NL  S     + ++A  Y   +++   +P    F +Y LG V+ +  ++  A
Sbjct: 110 PNFALAFANLGGSLLEGNNLQQANDYLQRALEL--EPR-LGFAHYNLGLVRQQQQNWEGA 166

Query: 362 LTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLI 421
           + +F+K +E+  +  E    LG  Y+Q G++ +A+    +A KI+PR ++A+ +LG +L 
Sbjct: 167 IASFQKAVELSKNAPEPHYYLGISYLQQGKLNEAKNAFNQAIKINPRYSEAYYNLGVVLF 226

Query: 422 S-SDTGAALDAFK 433
           +      AL AF+
Sbjct: 227 NQGQPQEALTAFR 239



 Score = 42.7 bits (99), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 34/138 (24%), Positives = 67/138 (48%), Gaps = 5/138 (3%)

Query: 89  LGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQAS 148
           LG  +  LG +    R++++++  A   + KA  +  + P      G   L +G++ +A 
Sbjct: 146 LGFAHYNLGLV----RQQQQNWEGAIASFQKAVELSKNAPEPHYYLGISYLQQGKLNEAK 201

Query: 149 SAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRY 208
           +AF   ++ +     A      V FN+G+  ++L  ++++ + +P+ P A   G GL   
Sbjct: 202 NAFNQAIKINPRYSEAYYNLGVVLFNQGQPQEALTAFRKSAEANPNYPNAY-YGAGLVFT 260

Query: 209 KLGQLGKARQAFQRALQL 226
           +L Q G+A + F  A  L
Sbjct: 261 QLNQYGEAAKVFNHAKNL 278



 Score = 40.4 bits (93), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 31/125 (24%), Positives = 59/125 (47%), Gaps = 8/125 (6%)

Query: 353 LKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQA 412
           ++ G  + A+  F+  +++ P+       LG    Q GQ++ A +   +A + DP  A A
Sbjct: 56  IQAGRLQDAIAAFQSAIQLDPNLAAAHYNLGLALRQTGQLQPAADAFYRATQSDPNFALA 115

Query: 413 FIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLN--NIGVIHFEKGEFESAHQS 470
           F +LG  L+  +        + A   L++A E  P       N+G++  ++  +E A  S
Sbjct: 116 FANLGGSLLEGNN------LQQANDYLQRALELEPRLGFAHYNLGLVRQQQQNWEGAIAS 169

Query: 471 FKDAL 475
           F+ A+
Sbjct: 170 FQKAV 174


>gi|410914070|ref|XP_003970511.1| PREDICTED: LOW QUALITY PROTEIN: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit-like
           [Takifugu rubripes]
          Length = 1036

 Score = 66.2 bits (160), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 87/391 (22%), Positives = 166/391 (42%), Gaps = 34/391 (8%)

Query: 93  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 152
           Y+ LG +  ++ + +E    A ++Y  A R+       ++     L+A G++E A  A+ 
Sbjct: 82  YSNLGNVYKERGQLQE----AIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 137

Query: 153 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 210
             L+ + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 138 SALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIETQPNFAVAWS-NLGCVFNAQ 194

Query: 211 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 270
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 195 GEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAGYLRALSLSPNHAVV 251

Query: 271 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 330
              LA  ++  G   L       A+ +  H P    +Y NLA +   KG+  +A   Y  
Sbjct: 252 HGNLACVYYEQGLIDLAIDTYRRAIELQPHFPD---AYCNLANALKEKGNVSEAEECYNT 308

Query: 331 SVKEINKPHEFIFPYYG-----LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 385
           +++        + P +      L  ++ + G+   A+  + K LE++P+       L  +
Sbjct: 309 ALR--------LCPTHADSLNNLANIKREQGNIEEAIQLYRKALEVFPEFAAAHSNLASV 360

Query: 386 YVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGE 444
             Q G++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +      
Sbjct: 361 LQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA- 419

Query: 445 EVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
               +  +N+  IH + G    A  S++ AL
Sbjct: 420 ----DAHSNLASIHKDSGNIPEAIASYRTAL 446



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 103/496 (20%), Positives = 194/496 (39%), Gaps = 64/496 (12%)

Query: 142 GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 201
           G+ E A      +   + DN   LL  + + F   R   S  F   A++ +P    A   
Sbjct: 25  GDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPMLAEAYS- 83

Query: 202 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 261
            +G    + GQL +A + ++ AL+L P+ ++  + LA   + A +  G    ++    A 
Sbjct: 84  NLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEG---AVQAYVSAL 140

Query: 262 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 319
           +  P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G
Sbjct: 141 QYNPDLYCVRS--DLGNLLKALGR---LEEAKACYLKAIETQPNFAVAWSNLGCVFNAQG 195

Query: 320 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 379
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++    
Sbjct: 196 EIWLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVAGYLRALSLSPNHAVVH 252

Query: 380 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLI-SSDTGAALDAFKTARTL 438
             L  +Y + G I+ A +  R+A ++ P    A+ +L   L    +   A + + TA  L
Sbjct: 253 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGNVSEAEECYNTALRL 312

Query: 439 LKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASAS 498
                +      LNN+  I  E+G  E A Q ++ AL                       
Sbjct: 313 CPTHADS-----LNNLANIKREQGNIEEAIQLYRKAL----------------------- 344

Query: 499 MLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDY 558
                  ++F  F                  NLA +L+Q      A + Y+  +     +
Sbjct: 345 -------EVFPEF-------------AAAHSNLASVLQQQGKLQEALMHYKEAIRISPTF 384

Query: 559 VDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRA 618
            DAY  +    K   ++Q +++    A+++N  + +A S L  +   + +  +A  ++R 
Sbjct: 385 ADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRT 444

Query: 619 ASD-ATDGKDSYATLS 633
           A     D  D+Y  L+
Sbjct: 445 ALKLKPDFPDAYCNLA 460


>gi|341877597|gb|EGT33532.1| hypothetical protein CAEBREN_05677 [Caenorhabditis brenneri]
          Length = 407

 Score = 66.2 bits (160), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 62/247 (25%), Positives = 114/247 (46%), Gaps = 23/247 (9%)

Query: 239 VMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQH-FLVEQLTETALAV 297
           V  L A     + + ME  Q+A+E+          +    F  G+H   VEQLT+ +  +
Sbjct: 38  VRGLIARNEGELEEAMECFQKAYELSGRNKRYYYEIGRCNFLLGRHQIAVEQLTKASEVM 97

Query: 298 TNHGPTKSHSYYNLARS-YHSKGDYEKAGLYY--------MASVKEINKPHEFIFPYYGL 348
            N+       +Y LAR+ YH   +  ++G  +        + S  +I +    I     L
Sbjct: 98  KNNPKV----WYWLARAIYHFPAEKMESGKTFNPVESARTVLSKDDIARDATLIC---FL 150

Query: 349 GQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPR 408
           G++  +L D   A+  +   L++ PDN E +  LG IY+++G++++    L      DP 
Sbjct: 151 GRLCEELDDKEGAIQAYNNALKLQPDNTEVMNLLGLIYLRMGKVQEGFMQLGNCLAYDPS 210

Query: 409 DAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESA 467
           ++QA + +G ++ + SD   AL+ ++ A  +    G      + NNIG+    + +  +A
Sbjct: 211 NSQAILTIGSIMQNHSDHDVALNKYRVAADVCDYNG-----CLWNNIGIGLLARNKAAAA 265

Query: 468 HQSFKDA 474
           H + K A
Sbjct: 266 HSALKKA 272


>gi|126342737|ref|XP_001362233.1| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit isoform
           1 [Monodelphis domestica]
          Length = 1045

 Score = 66.2 bits (160), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 104/479 (21%), Positives = 189/479 (39%), Gaps = 29/479 (6%)

Query: 142 GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 201
           G+ E A      +   + DN   LL  + + F   R   S  F   A++ +P    A   
Sbjct: 35  GDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYS- 93

Query: 202 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 261
            +G    + GQL +A + ++ AL+L P+ ++  + LA   + A +  G    ++    A 
Sbjct: 94  NLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEG---AVQAYVSAL 150

Query: 262 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 319
           +  P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G
Sbjct: 151 QYNPDLYCVRS--DLGNLLKALGR---LEEAKACYLKAIETQPNFAVAWSNLGCVFNAQG 205

Query: 320 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 379
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++    
Sbjct: 206 EIWLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVH 262

Query: 380 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGA-ALDAFKTARTL 438
             L  +Y + G I+ A +  R+A ++ P    A+ +L   L    + A A D + TA  L
Sbjct: 263 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRL 322

Query: 439 LKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASAS 498
                +      LNN+  I  E+G  E A + ++ AL       +       +   AS  
Sbjct: 323 CPTHADS-----LNNLANIKREQGNIEEAVRLYRKAL------EVFPEFAAAHSNLASVL 371

Query: 499 MLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDY 558
             Q K  +    ++     + +         N+   L+++ D   A   Y   +     +
Sbjct: 372 QQQGKLQEALMHYKEA---IRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAF 428

Query: 559 VDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFR 617
            DA+  LA+I K   N+  +I     ALK+   +P+A   L        DW    E  +
Sbjct: 429 ADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMK 487



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 86/386 (22%), Positives = 164/386 (42%), Gaps = 24/386 (6%)

Query: 93  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 152
           Y+ LG +  ++ + +E    A ++Y  A R+       ++     L+A G++E A  A+ 
Sbjct: 92  YSNLGNVYKERGQLQE----AIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 147

Query: 153 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 210
             L+ + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 148 SALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIETQPNFAVAWS-NLGCVFNAQ 204

Query: 211 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 270
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 205 GEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAAYLRALSLSPNHAVV 261

Query: 271 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 330
              LA  ++  G   L       A+ +  H P    +Y NLA +   KG   +A   Y  
Sbjct: 262 HGNLACVYYEQGLIDLAIDTYRRAIELQPHFPD---AYCNLANALKEKGSVAEAEDCYNT 318

Query: 331 SVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLG 390
           +++      + +     L  ++ + G+   A+  + K LE++P+       L  +  Q G
Sbjct: 319 ALRLCPTHADSL---NNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQG 375

Query: 391 QIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGEEVPIE 449
           ++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +          +
Sbjct: 376 KLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA-----D 430

Query: 450 VLNNIGVIHFEKGEFESAHQSFKDAL 475
             +N+  IH + G    A  S++ AL
Sbjct: 431 AHSNLASIHKDSGNIPEAIASYRTAL 456



 Score = 42.4 bits (98), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 76/347 (21%), Positives = 141/347 (40%), Gaps = 57/347 (16%)

Query: 278 FFFTGQHFLVEQLTETA----LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK 333
              +  HF   +L  +A    LA+  + P  + +Y NL   Y  +G  ++A  +Y  +++
Sbjct: 59  LLLSSIHFQCRRLDRSAHFSTLAIKQN-PLLAEAYSNLGNVYKERGQLQEAIEHYRHALR 117

Query: 334 EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIE 393
              KP +FI  Y  L    +  GD   A+  +   L+  PD       LG++   LG++E
Sbjct: 118 L--KP-DFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLE 174

Query: 394 KAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNN 453
           +A+    KA +  P  A A+ +LG                    +    GE         
Sbjct: 175 EAKACYLKAIETQPNFAVAWSNLG-------------------CVFNAQGEIW------- 208

Query: 454 IGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVID-ASASMLQFKDMQLFHRFE 512
           + + HFEK    +   +F DA     ++ L +   +  + D A A+ L+   +       
Sbjct: 209 LAIHHFEKAV--TLDPNFLDA-----YINLGNVLKEARIFDRAVAAYLRALSLS------ 255

Query: 513 NDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKAR 572
              NH  +  N   V +    L++   DT      YR  +     + DAY  LA   K +
Sbjct: 256 --PNHAVVHGNLACVYYEQG-LIDLAIDT------YRRAIELQPHFPDAYCNLANALKEK 306

Query: 573 NNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAA 619
            ++  + +  N AL++   + ++L+ L +++ +  +  +A   +R A
Sbjct: 307 GSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKA 353


>gi|113475191|ref|YP_721252.1| glycosyl transferase family protein [Trichodesmium erythraeum
           IMS101]
 gi|110166239|gb|ABG50779.1| glycosyl transferase, family 2 [Trichodesmium erythraeum IMS101]
          Length = 1737

 Score = 66.2 bits (160), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 83/340 (24%), Positives = 153/340 (45%), Gaps = 44/340 (12%)

Query: 96  LGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK--I 153
           LG ++ KQ + E+    A   Y++A +I+ +    ++  G  L+ KG + +A + F+  I
Sbjct: 86  LGNVQEKQGQLEQ----AIASYSQAIKINPNFSELYISLGSALVQKGLLYEAIANFQKAI 141

Query: 154 VLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS-CPGAIRLGIGLCRYKLGQ 212
            LE +       LG A  +  +G+  + +  Y++A+++ P    G  +LGI L   K G+
Sbjct: 142 SLEPESSIAHQNLGVALEK--QGQIEEGIICYRKAIEIDPGFWEGYQKLGIALT--KQGE 197

Query: 213 LGKARQAFQRALQLDPENV-------EALVALAVMDLQANEAAGIRKGMEKMQRAFEIYP 265
             +A + + +A Q+ P +        E L  L   D      A  R+ ++    +  IY 
Sbjct: 198 FHQAAKIYLKACQIIPNSATVYHHYGETLAKLRRWD---EAIAAYRQAIKLEANSPVIY- 253

Query: 266 YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG----PTKSHSYYNLARSYHSKGDY 321
                      H F  G     +Q  E A++         P     Y++L  +   + ++
Sbjct: 254 -----------HQF--GYVLTQKQQWEEAISAYRQAIKIKPNSPDVYHHLGDALTQQQNW 300

Query: 322 EKA-GLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLK 380
           E+A G Y   +  + N P  + +  Y L Q+Q     +  A+  + K  E+ P++ +   
Sbjct: 301 EEAVGAYRKVTELQPNSPEVYHYFGYALSQLQ----QWEEAIVAYRKASELQPNSPDVHH 356

Query: 381 ALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 420
            LGH  ++L Q + A   LR+A +++P  A+A+ DLG  L
Sbjct: 357 QLGHALIELKQNDWAVVELRQAVELNPNLAEAYRDLGRAL 396



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 90/397 (22%), Positives = 183/397 (46%), Gaps = 31/397 (7%)

Query: 85  ILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEV 144
           I N+  VY+ Y G+   K R  +E    A   Y +A +++ + P  +   G +L  K + 
Sbjct: 212 IPNSATVYHHY-GETLAKLRRWDE----AIAAYRQAIKLEANSPVIYHQFGYVLTQKQQW 266

Query: 145 EQASSAFK--IVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLG 202
           E+A SA++  I ++ +  +V   LG A  +  +  + +++  Y++  ++ P+ P      
Sbjct: 267 EEAISAYRQAIKIKPNSPDVYHHLGDALTQ--QQNWEEAVGAYRKVTELQPNSPEVYHY- 323

Query: 203 IGLCRYKLGQLGKARQAFQRALQLDPE--NVEALVALAVMDLQANEAAGIRKGMEKMQRA 260
            G    +L Q  +A  A+++A +L P   +V   +  A+++L+ N+ A +     ++++A
Sbjct: 324 FGYALSQLQQWEEAIVAYRKASELQPNSPDVHHQLGHALIELKQNDWAVV-----ELRQA 378

Query: 261 FEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGD 320
            E+ P  A A   L        Q    ++   +        P  +  Y  L ++Y S+  
Sbjct: 379 VELNPNLAEAYRDLGRALSNIKQW---DEAIASFQGAIELNPNLAEVYGYLGKAYASQKQ 435

Query: 321 YEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLK 380
           +++A + Y  ++K   K  E    ++ L    ++   F  A+ ++ + +E+  +  E   
Sbjct: 436 WDEAIVNYGHALKLNPKLPEV---HHNLALTLVQQQKFDDAIVSYGQAIELGINTAEIHH 492

Query: 381 ALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLK 440
            LGH   +L + ++A    R+AA+I+P  A  +  LGE L      A L+ +  A     
Sbjct: 493 QLGHTLSKLKRWDEAVISYRQAAEINPNSAAVYHVLGESL------AQLEKWDEAVAAYT 546

Query: 441 KAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDAL 475
           KA +  P   +V  +IG +    G ++ A +++  A+
Sbjct: 547 KASQLHPKSADVRYHIGEVMSRLGRWDEAVEAYGKAV 583



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 71/334 (21%), Positives = 142/334 (42%), Gaps = 35/334 (10%)

Query: 296 AVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKL 355
           ++ +  PT+   Y+   +   + G  EKA   Y  ++ E+N P+  ++    LG V  K+
Sbjct: 6   SLNSETPTQ---YFQQGQQAVAAGQLEKAVTLYKKTI-ELN-PNLALYQQ-NLGDVLAKI 59

Query: 356 GDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFID 415
           G +  A T ++K +E+ P +  +   LG++  + GQ+E+A     +A KI+P  ++ +I 
Sbjct: 60  GKWEEAATVYQKAIELKPTSALSHYNLGNVQEKQGQLEQAIASYSQAIKINPNFSELYIS 119

Query: 416 LGELLISSD-TGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDA 474
           LG  L+       A+  F+ A +L  ++          N+GV   ++G+ E     ++ A
Sbjct: 120 LGSALVQKGLLYEAIANFQKAISLEPESS-----IAHQNLGVALEKQGQIEEGIICYRKA 174

Query: 475 --LGDGIW-----LTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTV 527
             +  G W     L +  +K   +     A+ +  K  Q+            +P N  TV
Sbjct: 175 IEIDPGFWEGYQKLGIALTKQGEF---HQAAKIYLKACQI------------IP-NSATV 218

Query: 528 LFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALK 587
             +    L ++     A   YR  +    +    Y +   +   +   + +I    +A+K
Sbjct: 219 YHHYGETLAKLRRWDEAIAAYRQAIKLEANSPVIYHQFGYVLTQKQQWEEAISAYRQAIK 278

Query: 588 VNGKYPNALSMLGDLELKNDDWVKAKETFRAASD 621
           +    P+    LGD   +  +W +A   +R  ++
Sbjct: 279 IKPNSPDVYHHLGDALTQQQNWEEAVGAYRKVTE 312



 Score = 42.0 bits (97), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 60/302 (19%), Positives = 129/302 (42%), Gaps = 23/302 (7%)

Query: 176 GRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV 235
           G+   ++  YK+ ++++P+     +  +G    K+G+  +A   +Q+A++L P    AL 
Sbjct: 26  GQLEKAVTLYKKTIELNPNL-ALYQQNLGDVLAKIGKWEEAATVYQKAIELKP--TSALS 82

Query: 236 ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETAL 295
              + ++Q  +   + + +    +A +I P  +     L +     G   L E +     
Sbjct: 83  HYNLGNVQEKQGQ-LEQAIASYSQAIKINPNFSELYISLGSALVQKG--LLYEAIANFQK 139

Query: 296 AVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKL 355
           A++   P  S ++ NL  +   +G  E+  + Y  ++ EI+    F   Y  LG    K 
Sbjct: 140 AISLE-PESSIAHQNLGVALEKQGQIEEGIICYRKAI-EIDPG--FWEGYQKLGIALTKQ 195

Query: 356 GDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFID 415
           G+F  A   + K  +I P++       G    +L + ++A    R+A K++      +  
Sbjct: 196 GEFHQAAKIYLKACQIIPNSATVYHHYGETLAKLRRWDEAIAAYRQAIKLEANSPVIYHQ 255

Query: 416 LGELLISSDTG-AALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDA 474
            G +L        A+ A++ A            I++  N   ++   G+  +  Q++++A
Sbjct: 256 FGYVLTQKQQWEEAISAYRQA------------IKIKPNSPDVYHHLGDALTQQQNWEEA 303

Query: 475 LG 476
           +G
Sbjct: 304 VG 305


>gi|126342739|ref|XP_001362317.1| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit isoform
           2 [Monodelphis domestica]
          Length = 1035

 Score = 66.2 bits (160), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 104/479 (21%), Positives = 189/479 (39%), Gaps = 29/479 (6%)

Query: 142 GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 201
           G+ E A      +   + DN   LL  + + F   R   S  F   A++ +P    A   
Sbjct: 25  GDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYS- 83

Query: 202 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 261
            +G    + GQL +A + ++ AL+L P+ ++  + LA   + A +  G    ++    A 
Sbjct: 84  NLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEG---AVQAYVSAL 140

Query: 262 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 319
           +  P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G
Sbjct: 141 QYNPDLYCVRS--DLGNLLKALGR---LEEAKACYLKAIETQPNFAVAWSNLGCVFNAQG 195

Query: 320 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 379
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++    
Sbjct: 196 EIWLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVH 252

Query: 380 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGA-ALDAFKTARTL 438
             L  +Y + G I+ A +  R+A ++ P    A+ +L   L    + A A D + TA  L
Sbjct: 253 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRL 312

Query: 439 LKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASAS 498
                +      LNN+  I  E+G  E A + ++ AL       +       +   AS  
Sbjct: 313 CPTHADS-----LNNLANIKREQGNIEEAVRLYRKAL------EVFPEFAAAHSNLASVL 361

Query: 499 MLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDY 558
             Q K  +    ++     + +         N+   L+++ D   A   Y   +     +
Sbjct: 362 QQQGKLQEALMHYKEA---IRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAF 418

Query: 559 VDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFR 617
            DA+  LA+I K   N+  +I     ALK+   +P+A   L        DW    E  +
Sbjct: 419 ADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMK 477



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 86/386 (22%), Positives = 164/386 (42%), Gaps = 24/386 (6%)

Query: 93  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 152
           Y+ LG +  ++ + +E    A ++Y  A R+       ++     L+A G++E A  A+ 
Sbjct: 82  YSNLGNVYKERGQLQE----AIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 137

Query: 153 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 210
             L+ + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 138 SALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIETQPNFAVAWS-NLGCVFNAQ 194

Query: 211 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 270
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 195 GEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAAYLRALSLSPNHAVV 251

Query: 271 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 330
              LA  ++  G   L       A+ +  H P    +Y NLA +   KG   +A   Y  
Sbjct: 252 HGNLACVYYEQGLIDLAIDTYRRAIELQPHFPD---AYCNLANALKEKGSVAEAEDCYNT 308

Query: 331 SVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLG 390
           +++      + +     L  ++ + G+   A+  + K LE++P+       L  +  Q G
Sbjct: 309 ALRLCPTHADSL---NNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQG 365

Query: 391 QIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGEEVPIE 449
           ++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +          +
Sbjct: 366 KLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA-----D 420

Query: 450 VLNNIGVIHFEKGEFESAHQSFKDAL 475
             +N+  IH + G    A  S++ AL
Sbjct: 421 AHSNLASIHKDSGNIPEAIASYRTAL 446



 Score = 42.4 bits (98), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 76/347 (21%), Positives = 141/347 (40%), Gaps = 57/347 (16%)

Query: 278 FFFTGQHFLVEQLTETA----LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK 333
              +  HF   +L  +A    LA+  + P  + +Y NL   Y  +G  ++A  +Y  +++
Sbjct: 49  LLLSSIHFQCRRLDRSAHFSTLAIKQN-PLLAEAYSNLGNVYKERGQLQEAIEHYRHALR 107

Query: 334 EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIE 393
              KP +FI  Y  L    +  GD   A+  +   L+  PD       LG++   LG++E
Sbjct: 108 L--KP-DFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLE 164

Query: 394 KAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNN 453
           +A+    KA +  P  A A+ +LG                    +    GE         
Sbjct: 165 EAKACYLKAIETQPNFAVAWSNLG-------------------CVFNAQGEIW------- 198

Query: 454 IGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVID-ASASMLQFKDMQLFHRFE 512
           + + HFEK    +   +F DA     ++ L +   +  + D A A+ L+   +       
Sbjct: 199 LAIHHFEKAV--TLDPNFLDA-----YINLGNVLKEARIFDRAVAAYLRALSLS------ 245

Query: 513 NDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKAR 572
              NH  +  N   V +    L++   DT      YR  +     + DAY  LA   K +
Sbjct: 246 --PNHAVVHGNLACVYYEQG-LIDLAIDT------YRRAIELQPHFPDAYCNLANALKEK 296

Query: 573 NNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAA 619
            ++  + +  N AL++   + ++L+ L +++ +  +  +A   +R A
Sbjct: 297 GSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKA 343


>gi|386347101|ref|YP_006045350.1| hypothetical protein [Spirochaeta thermophila DSM 6578]
 gi|339412068|gb|AEJ61633.1| Tetratricopeptide TPR_2 repeat-containing protein [Spirochaeta
           thermophila DSM 6578]
          Length = 365

 Score = 66.2 bits (160), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 63/276 (22%), Positives = 119/276 (43%), Gaps = 14/276 (5%)

Query: 134 KGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHP 193
           +G  LL +   E+A   F+ +LE DR N  AL+G       +G +  ++ +Y+  L+ +P
Sbjct: 19  EGYALLKQDRPEEAIIRFEKILELDRHNNYALVGLGDAYRKKGEHDRAVSYYRECLRYYP 78

Query: 194 SCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKG 253
               A+  G+  C     +  +A + +++ L+ D  NV  L  +A       +    ++ 
Sbjct: 79  GNNYAL-FGLADCYKAQERYREAIEIWEKYLKYDETNVTVLTRVADA---YRKTGNFKRS 134

Query: 254 MEKMQRAFEI---YPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYN 310
            E   +  E+    PY  + L +L  H+ F      +      A+   +           
Sbjct: 135 KELYLKVLELDEGNPYALIGLGHL--HYDFKDYRTAISYWE--AILERDRDRVDIRVLTA 190

Query: 311 LARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLE 370
           +   +     YE+   Y++ ++++   PH F +  +GL      +GD R +L  +E++LE
Sbjct: 191 IGNCHRKLKQYERGIPYFLKALEK--DPHNF-YALFGLADCYRGVGDHRRSLQYWERILE 247

Query: 371 IYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKID 406
             P N   L   G  Y  LG + +A+E   +A  I+
Sbjct: 248 KDPHNKVILTRTGDAYRHLGDLARAEEYYHQALNIE 283



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 71/322 (22%), Positives = 125/322 (38%), Gaps = 49/322 (15%)

Query: 117 YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 176
           + K   +D H     VG G     KGE ++A S ++  L     N  AL G A     + 
Sbjct: 36  FEKILELDRHNNYALVGLGDAYRKKGEHDRAVSYYRECLRYYPGNNYALFGLADCYKAQE 95

Query: 177 RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVA 236
           RY +++E +++ L+   +    +       R K G   ++++ + + L+LD  N  AL+ 
Sbjct: 96  RYREAIEIWEKYLKYDETNVTVLTRVADAYR-KTGNFKRSKELYLKVLELDEGNPYALIG 154

Query: 237 LAVM-------------------------DLQANEAAG--------IRKGMEKMQRAFEI 263
           L  +                         D++   A G          +G+    +A E 
Sbjct: 155 LGHLHYDFKDYRTAISYWEAILERDRDRVDIRVLTAIGNCHRKLKQYERGIPYFLKALEK 214

Query: 264 YPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGP---TKSHSYYNLARSYHSKGD 320
            P+   AL  LA+ +   G H    Q  E  L    H     T++        +Y   GD
Sbjct: 215 DPHNFYALFGLADCYRGVGDHRRSLQYWERILEKDPHNKVILTRT------GDAYRHLGD 268

Query: 321 YEKAGLYYMASVK-EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 379
             +A  YY  ++  E +      +   GL  V     ++R A  +   +L + P+N +  
Sbjct: 269 LARAEEYYHQALNIEFDS-----YAILGLAMVHKARKEYREAAESLNTILRLDPENPKIY 323

Query: 380 KALGHIYVQLGQIEKAQELLRK 401
             L   Y+ L Q E+A+ +L++
Sbjct: 324 IELADCYLHLNQKEEARSVLKE 345



 Score = 42.0 bits (97), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 33/127 (25%), Positives = 58/127 (45%), Gaps = 3/127 (2%)

Query: 106 KEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPAL 165
           K  +F  + + Y K   +D   P   +G G L     +   A S ++ +LE DRD V   
Sbjct: 127 KTGNFKRSKELYLKVLELDEGNPYALIGLGHLHYDFKDYRTAISYWEAILERDRDRVDIR 186

Query: 166 LGQACVEFNR--GRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRA 223
           +  A    +R   +Y   + ++ +AL+  P    A+  G+  C   +G   ++ Q ++R 
Sbjct: 187 VLTAIGNCHRKLKQYERGIPYFLKALEKDPHNFYAL-FGLADCYRGVGDHRRSLQYWERI 245

Query: 224 LQLDPEN 230
           L+ DP N
Sbjct: 246 LEKDPHN 252


>gi|31873825|emb|CAD97853.1| hypothetical protein [Homo sapiens]
          Length = 1046

 Score = 66.2 bits (160), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 104/479 (21%), Positives = 189/479 (39%), Gaps = 29/479 (6%)

Query: 142 GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 201
           G+ E A      +   + DN   LL  + + F   R   S  F   A++ +P    A   
Sbjct: 35  GDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYS- 93

Query: 202 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 261
            +G    + GQL +A + ++ AL+L P+ ++  + LA   + A +  G    ++    A 
Sbjct: 94  NLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEG---AVQAYVSAL 150

Query: 262 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 319
           +  P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G
Sbjct: 151 QYNPDLYCVRS--DLGNLLKALGR---LEEAKACYLKAIETQPNFAVAWSNLGCVFNAQG 205

Query: 320 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 379
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++    
Sbjct: 206 EIWLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVH 262

Query: 380 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGA-ALDAFKTARTL 438
             L  +Y + G I+ A +  R+A ++ P    A+ +L   L    + A A D + TA  L
Sbjct: 263 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRL 322

Query: 439 LKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASAS 498
                +      LNN+  I  E+G  E A + ++ AL       +       +   AS  
Sbjct: 323 CPTHADS-----LNNLANIKREQGNIEEAVRLYRKAL------EVFPEFAAAHSNLASVL 371

Query: 499 MLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDY 558
             Q K  +    ++     + +         N+   L+++ D   A   Y   +     +
Sbjct: 372 QQQGKLQEALMHYKEA---IRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAF 428

Query: 559 VDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFR 617
            DA+  LA+I K   N+  +I     ALK+   +P+A   L        DW    E  +
Sbjct: 429 ADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMK 487



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 86/386 (22%), Positives = 164/386 (42%), Gaps = 24/386 (6%)

Query: 93  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 152
           Y+ LG +  ++ + +E    A ++Y  A R+       ++     L+A G++E A  A+ 
Sbjct: 92  YSNLGNVYKERGQLQE----AIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 147

Query: 153 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 210
             L+ + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 148 SALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIETQPNFAVAWS-NLGCVFNAQ 204

Query: 211 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 270
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 205 GEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAAYLRALSLSPNHAVV 261

Query: 271 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 330
              LA  ++  G   L       A+ +  H P    +Y NLA +   KG   +A   Y  
Sbjct: 262 HGNLACVYYEQGLIDLAIDTYRRAIELQPHFPD---AYCNLANALKEKGSVAEAEDCYNT 318

Query: 331 SVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLG 390
           +++      + +     L  ++ + G+   A+  + K LE++P+       L  +  Q G
Sbjct: 319 ALRLCPTHADSL---NNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQG 375

Query: 391 QIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGEEVPIE 449
           ++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +          +
Sbjct: 376 KLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA-----D 430

Query: 450 VLNNIGVIHFEKGEFESAHQSFKDAL 475
             +N+  IH + G    A  S++ AL
Sbjct: 431 AHSNLASIHKDSGNIPEAIASYRTAL 456



 Score = 42.4 bits (98), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 76/347 (21%), Positives = 141/347 (40%), Gaps = 57/347 (16%)

Query: 278 FFFTGQHFLVEQLTETA----LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK 333
              +  HF   +L  +A    LA+  + P  + +Y NL   Y  +G  ++A  +Y  +++
Sbjct: 59  LLLSSIHFQCRRLDRSAHFSTLAIKQN-PLLAEAYSNLGNVYKERGQLQEAIEHYRHALR 117

Query: 334 EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIE 393
              KP +FI  Y  L    +  GD   A+  +   L+  PD       LG++   LG++E
Sbjct: 118 L--KP-DFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLE 174

Query: 394 KAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNN 453
           +A+    KA +  P  A A+ +LG                    +    GE         
Sbjct: 175 EAKACYLKAIETQPNFAVAWSNLG-------------------CVFNAQGEIW------- 208

Query: 454 IGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVID-ASASMLQFKDMQLFHRFE 512
           + + HFEK    +   +F DA     ++ L +   +  + D A A+ L+   +       
Sbjct: 209 LAIHHFEKAV--TLDPNFLDA-----YINLGNVLKEARIFDRAVAAYLRALSLS------ 255

Query: 513 NDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKAR 572
              NH  +  N   V +    L++   DT      YR  +     + DAY  LA   K +
Sbjct: 256 --PNHAVVHGNLACVYYEQG-LIDLAIDT------YRRAIELQPHFPDAYCNLANALKEK 306

Query: 573 NNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAA 619
            ++  + +  N AL++   + ++L+ L +++ +  +  +A   +R A
Sbjct: 307 GSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKA 353


>gi|345303567|ref|YP_004825469.1| hypothetical protein Rhom172_1716 [Rhodothermus marinus
           SG0.5JP17-172]
 gi|345112800|gb|AEN73632.1| Tetratricopeptide TPR_2 repeat-containing protein [Rhodothermus
           marinus SG0.5JP17-172]
          Length = 402

 Score = 66.2 bits (160), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 84/380 (22%), Positives = 159/380 (41%), Gaps = 39/380 (10%)

Query: 99  IETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEAD 158
           ++ +Q  +   F  A    + A+R D  EP+ +  +G+L     + ++A +A++ VL+ D
Sbjct: 41  LQAEQALQRYDFAQALALADSAARYDPDEPAIYFLQGRLYAEMAQFDRAEAAYQEVLQRD 100

Query: 159 RDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQ 218
            +        A ++  + R+ +++  Y++ LQ +P  P      +     +LG +  A  
Sbjct: 101 PNFRGIWHNLANLKARQHRFREAIALYQKELQRYPGAP--TWQAMARAYRELGVVDSAAY 158

Query: 219 AFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHF 278
           A+++ALQLD   V A + +  +    ++     + +   QRA  + P      NYL    
Sbjct: 159 AYRQALQLDSTYVPAYIGMTQL---LDDEGRFAEALTYAQRAQALDPENPET-NYLLGEL 214

Query: 279 FFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEK--AGLYYMASVKEIN 336
                 F  E L      V    P  + ++Y+L ++    G  E+  A L     ++E+N
Sbjct: 215 LMKNGRF-AEALPYLQRVVAAW-PWHASAHYSLGQALLRVGRREEGEAALQRYEQLRELN 272

Query: 337 KPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQ 396
                        QVQ+            E+ +   PDN     ALG    + G+ E+A 
Sbjct: 273 ------------AQVQM-----------MEEAVRTTPDNPYAFAALGAALRRSGRYEEAL 309

Query: 397 ELLRKAAKIDPRDAQAFIDLGEL-LISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIG 455
                A  + P + +   +L  L  +  DT AA+  ++ A        +   I+   N+G
Sbjct: 310 RAYTIALFLSPDNPEILNNLAALYFVQGDTLAAMQTYRRALQ-----ADSTFIDAWLNLG 364

Query: 456 VIHFEKGEFESAHQSFKDAL 475
           V+H  +GE  +A  +++  L
Sbjct: 365 VLHALRGERAAAAYAWRQVL 384



 Score = 43.5 bits (101), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 68/301 (22%), Positives = 123/301 (40%), Gaps = 41/301 (13%)

Query: 455 GVIHFEKGEFESAHQSFKDALGD-----GIWLTLLDSKTKTYVIDASASMLQFKDMQLFH 509
           G ++ E  +F+ A  ++++ L       GIW  L + K + +    + ++ Q K++Q   
Sbjct: 77  GRLYAEMAQFDRAEAAYQEVLQRDPNFRGIWHNLANLKARQHRFREAIALYQ-KELQ--- 132

Query: 510 RFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIA 569
           R+          W        +AR   ++    +A+  YR  L     YV AY+ +  + 
Sbjct: 133 RYPGAPT-----WQA------MARAYRELGVVDSAAYAYRQALQLDSTYVPAYIGMTQLL 181

Query: 570 KARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSY 629
                   ++     A  ++ + P    +LG+L +KN  + +A    +    A     S 
Sbjct: 182 DDEGRFAEALTYAQRAQALDPENPETNYLLGELLMKNGRFAEALPYLQRVVAAWPWHAS- 240

Query: 630 ATLSLGNWNYFAALRNEKRAPKLEATH-LEKAKELYTRV------IVQHTSNLYAANGAG 682
           A  SLG     A LR  +R     A    E+ +EL  +V      +     N YA    G
Sbjct: 241 AHYSLGQ----ALLRVGRREEGEAALQRYEQLRELNAQVQMMEEAVRTTPDNPYAFAALG 296

Query: 683 VVLAEKGQFDVSKDLFTQVQEAASGSVFVQM--PDVWINLAHVYFAQGNFALAMKMYQNC 740
             L   G+++ +   +T        ++F+    P++  NLA +YF QG+   AM+ Y+  
Sbjct: 297 AALRRSGRYEEALRAYTI-------ALFLSPDNPEILNNLAALYFVQGDTLAAMQTYRRA 349

Query: 741 L 741
           L
Sbjct: 350 L 350



 Score = 43.1 bits (100), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 79/360 (21%), Positives = 135/360 (37%), Gaps = 91/360 (25%)

Query: 162 VPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQ 221
           V ALL QA     R  ++ +L     A +  P  P AI    G    ++ Q  +A  A+Q
Sbjct: 36  VRALLLQAEQALQRYDFAQALALADSAARYDPDEP-AIYFLQGRLYAEMAQFDRAEAAYQ 94

Query: 222 RALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFT 281
             LQ DP        LA +  + +     R+ +   Q+  + YP                
Sbjct: 95  EVLQRDPNFRGIWHNLANLKARQHR---FREAIALYQKELQRYP---------------- 135

Query: 282 GQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEF 341
                               PT    +  +AR+Y   G  + A   Y  +++  +    +
Sbjct: 136 ------------------GAPT----WQAMARAYRELGVVDSAAYAYRQALQLDST---Y 170

Query: 342 IFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRK 401
           +  Y G+ Q+    G F  ALT  ++   + P+N ET   LG + ++ G+  +A   L++
Sbjct: 171 VPAYIGMTQLLDDEGRFAEALTYAQRAQALDPENPETNYLLGELLMKNGRFAEALPYLQR 230

Query: 402 AAKIDPRDAQAFIDLGELLI----SSDTGAALDAFKTARTL------------------- 438
                P  A A   LG+ L+      +  AAL  ++  R L                   
Sbjct: 231 VVAAWPWHASAHYSLGQALLRVGRREEGEAALQRYEQLRELNAQVQMMEEAVRTTPDNPY 290

Query: 439 --------LKKAG--EEV-----------P--IEVLNNIGVIHFEKGEFESAHQSFKDAL 475
                   L+++G  EE            P   E+LNN+  ++F +G+  +A Q+++ AL
Sbjct: 291 AFAALGAALRRSGRYEEALRAYTIALFLSPDNPEILNNLAALYFVQGDTLAAMQTYRRAL 350



 Score = 41.6 bits (96), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 44/200 (22%), Positives = 82/200 (41%), Gaps = 12/200 (6%)

Query: 283 QHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFI 342
           Q +   Q    A +   + P +   Y+   R Y     +++A   Y    + + +   F 
Sbjct: 48  QRYDFAQALALADSAARYDPDEPAIYFLQGRLYAEMAQFDRAEAAYQ---EVLQRDPNFR 104

Query: 343 FPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKA 402
             ++ L  ++ +   FR A+  ++K L+ YP    T +A+   Y +LG ++ A    R+A
Sbjct: 105 GIWHNLANLKARQHRFREAIALYQKELQRYP-GAPTWQAMARAYRELGVVDSAAYAYRQA 163

Query: 403 AKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNN--IGVIHFE 460
            ++D     A+I + +LL   D G     F  A T  ++A    P     N  +G +  +
Sbjct: 164 LQLDSTYVPAYIGMTQLL--DDEG----RFAEALTYAQRAQALDPENPETNYLLGELLMK 217

Query: 461 KGEFESAHQSFKDALGDGIW 480
            G F  A    +  +    W
Sbjct: 218 NGRFAEALPYLQRVVAAWPW 237


>gi|196006521|ref|XP_002113127.1| hypothetical protein TRIADDRAFT_56979 [Trichoplax adhaerens]
 gi|190585168|gb|EDV25237.1| hypothetical protein TRIADDRAFT_56979 [Trichoplax adhaerens]
          Length = 1437

 Score = 66.2 bits (160), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 96/401 (23%), Positives = 170/401 (42%), Gaps = 78/401 (19%)

Query: 135 GQLLLAKGEVEQA----SSAFKIVLEADRDNVPAL------LGQACVEFNRGRYSDSLEF 184
           G++   +G+ + A    S + KI L    DN P++      LG   V  N+G+Y D+L  
Sbjct: 595 GEVYTDQGKYDDAVSMISKSIKIDLTKLGDNHPSIANTYGELGH--VYKNQGKYDDALSA 652

Query: 185 YKRALQVHPSCPGAIRLGIGLCRYKLGQL----GKARQA---FQRALQLD----PENVEA 233
             ++L++  S  G   L I L   ++GQ+    GK  +A     ++L+L+      N   
Sbjct: 653 LYKSLKIKLSQAGKNYLSISLTYDRIGQVYHCQGKCDEALSMLNKSLKLNLTRFANNHPN 712

Query: 234 LVALAVMDLQANEAAGIRKGMEKMQRAFEIY-PYCAMALNYLANHFFFT-------GQHF 285
           +V+L       N+ A +     K   A  I+     + L  L N+   T       GQ +
Sbjct: 713 IVSL------HNKIARVYNQQAKYDDALSIFNKSLKLILTRLGNNHPRTAAIYRDIGQVY 766

Query: 286 LVEQLTETALAVTNHG------------PTKSHSYYNLARSYHSKGDYEKAGLYYMASVK 333
             +   + AL+V N              P+ + +Y N+   Y+ +G Y+ A   +  S+K
Sbjct: 767 NDQGKYDDALSVYNKSLKIILTKLDDNHPSIASTYDNIGLVYNKQGKYDDALSVHNKSLK 826

Query: 334 ----EINKPHEFI-FPYYGLGQVQLKLGDFRSALTNFEKVLEI--------YPDNCETLK 380
                +   H+ I   Y  +GQV    G    AL+ F K L+I        +P    T  
Sbjct: 827 IKLTRLGDNHQSIAITYRNIGQVYNDQGKHDEALSMFNKSLKITIKQLGNNHPSIANTYN 886

Query: 381 ALGHIYVQLGQIEKAQELLRKAAKID--------PRDAQAFIDLGELLISSDTGAALDAF 432
            +G +Y   G+ + A  +  K+ KI         P   + + D+G+  + +D G   DA 
Sbjct: 887 KIGQVYNNQGKYDDALSVYNKSLKITLTRLGDNHPNITKTYGDIGQ--VYNDQGKYDDAL 944

Query: 433 ----KTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESA 467
               K+ +  L K  +  P   +  +NIG+++ ++G+++ A
Sbjct: 945 SVYNKSLKITLTKFDDNHPSIAKTYDNIGLVYNKQGKYDDA 985



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 101/457 (22%), Positives = 191/457 (41%), Gaps = 95/457 (20%)

Query: 93  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPS--------TWVGKGQLLLAKGEV 144
           Y  +G++  +Q + ++    A   +NK+ +I +  P+        T+   GQ+   +G+ 
Sbjct: 164 YNNIGQVYNRQGKYDD----ALSIHNKSLKITLTRPNGNHSIIANTYRDIGQVYNNQGKY 219

Query: 145 EQASSAF----KIVLEADRDNVPAL------LGQACVEFNRGRYSDSLEFYKRAL----- 189
           + A S +    KI L    DN P++      +GQ  V  ++G+Y D+L  + ++L     
Sbjct: 220 DDALSVYNKSLKITLTKLGDNHPSIANIYDKIGQ--VYCHQGKYDDALPVFNKSLKTQLT 277

Query: 190 QVHPSCPGAIRLGIGLCRYKLGQL----GK---ARQAFQRALQLDPENVEALVALA---- 238
           Q+  + P  I L I      +GQ+    GK   A  A+ ++L++       L  L     
Sbjct: 278 QLDENHPMEIILIIANTYRDIGQVYNNQGKYDDALSAYNKSLKI------TLTKLGDNHP 331

Query: 239 VMDLQANEAAGIRKGMEKMQRAFEIY---------------PYCAMALNYLANHFFFTGQ 283
            +    +    +    +K   A  +Y               P  A+  N +   +   G+
Sbjct: 332 SIANTYDNIGQVYNNQDKYDDALSLYYKSLKIKLTQLGDNHPSIAITYNNIGKAYSDQGK 391

Query: 284 H-----FLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK----- 333
           +      L + L    + + ++ P+ + +Y N+AR+Y+S+G Y+ A   Y  S+K     
Sbjct: 392 YDEALSMLNKSLKIRLVQLGDNHPSIADTYNNIARAYNSQGKYDNALSVYNKSLKIQLTQ 451

Query: 334 -EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEI--------YPDNCETLKALGH 384
              N P+  I  Y G+G V + LG    AL+ ++K L+I        +P   E    +G 
Sbjct: 452 LGDNHPNTAI-TYNGIGNVYVNLGKQDDALSVYKKSLKIELAQPGENHPYTAEIYNNIGQ 510

Query: 385 IYVQLGQIEKAQELLRKAAKID-PRDAQAFIDLGELL-----ISSDTGAALDAF----KT 434
           + +  G  + A  +L K+ KI   R     + +         + +  G   DA     K+
Sbjct: 511 MNIYQGNYDSALLMLNKSLKIHLTRLGDNHLGITNTYHNVARVYTRQGKYDDALSICNKS 570

Query: 435 ARTLLKKAGEEVP----IEVLNNIGVIHFEKGEFESA 467
            + LL K G+         +  NIG ++ ++G+++ A
Sbjct: 571 IKVLLTKFGDNCNHPRIARIYRNIGEVYTDQGKYDDA 607



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 109/498 (21%), Positives = 201/498 (40%), Gaps = 108/498 (21%)

Query: 33  LKAEQAPL-DLWLIIAREYFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAIL-NALG 90
           L++E   + DL+  I   Y  QGK +    +  +    ++ +   D  +  IAI  + +G
Sbjct: 69  LRSEDISVSDLYHKIGNVYDDQGKYDDALSMFNKSLKTQLTQ--LDENHPSIAITYSNIG 126

Query: 91  VYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPS---TWVGKGQLLLAKGEVEQA 147
             Y +L K +      E   +L        +++  + PS   T+   GQ+   +G+ + A
Sbjct: 127 QVYKHLDKYD------EALSMLNKSLKITLTKLSNNHPSIANTYNNIGQVYNRQGKYDDA 180

Query: 148 SS----AFKIVLEADRDNVPAL------LGQACVEFNRGRYSDSLEFYKRALQV------ 191
            S    + KI L     N   +      +GQ  V  N+G+Y D+L  Y ++L++      
Sbjct: 181 LSIHNKSLKITLTRPNGNHSIIANTYRDIGQ--VYNNQGKYDDALSVYNKSLKITLTKLG 238

Query: 192 --HPSCPGAIRLGIGLCRYKLGQLGKARQAFQRAL-----QLD---PENVEALVALAVMD 241
             HPS    I   IG      G+   A   F ++L     QLD   P  +  ++A    D
Sbjct: 239 DNHPSIAN-IYDKIGQVYCHQGKYDDALPVFNKSLKTQLTQLDENHPMEIILIIANTYRD 297

Query: 242 LQA--NEAAGIRKGMEKMQRAFEIYPYCAMALNY--LANHFFFTGQHFLVEQLTETALAV 297
           +    N        +    ++ +I     +  N+  +AN +   GQ +  +   + AL++
Sbjct: 298 IGQVYNNQGKYDDALSAYNKSLKI-TLTKLGDNHPSIANTYDNIGQVYNNQDKYDDALSL 356

Query: 298 -------------TNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK----EINKPHE 340
                         NH P+ + +Y N+ ++Y  +G Y++A      S+K    ++   H 
Sbjct: 357 YYKSLKIKLTQLGDNH-PSIAITYNNIGKAYSDQGKYDEALSMLNKSLKIRLVQLGDNHP 415

Query: 341 FIF-PYYGLGQVQLKLGDFRSALTNFEKVLEI--------YPDNCETLKALGHIYVQLGQ 391
            I   Y  + +     G + +AL+ + K L+I        +P+   T   +G++YV LG+
Sbjct: 416 SIADTYNNIARAYNSQGKYDNALSVYNKSLKIQLTQLGDNHPNTAITYNGIGNVYVNLGK 475

Query: 392 IEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPI--E 449
            + A  + +K+ KI+                                L + GE  P   E
Sbjct: 476 QDDALSVYKKSLKIE--------------------------------LAQPGENHPYTAE 503

Query: 450 VLNNIGVIHFEKGEFESA 467
           + NNIG ++  +G ++SA
Sbjct: 504 IYNNIGQMNIYQGNYDSA 521



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 100/479 (20%), Positives = 196/479 (40%), Gaps = 72/479 (15%)

Query: 308 YYNLARSYHSKGDYEKAGLYYMASVK----EINKPHEFI-FPYYGLGQVQLKLGDFRSAL 362
           Y+ +   Y  +G Y+ A   +  S+K    ++++ H  I   Y  +GQV   L  +  AL
Sbjct: 80  YHKIGNVYDDQGKYDDALSMFNKSLKTQLTQLDENHPSIAITYSNIGQVYKHLDKYDEAL 139

Query: 363 TNFEKVLEI--------YPDNCETLKALGHIYVQLGQIEKAQELLRKAAKID---PRDAQ 411
           +   K L+I        +P    T   +G +Y + G+ + A  +  K+ KI    P    
Sbjct: 140 SMLNKSLKITLTKLSNNHPSIANTYNNIGQVYNRQGKYDDALSIHNKSLKITLTRPNGNH 199

Query: 412 AFI-----DLGELLISSDTGAALDAF----KTARTLLKKAGEEVP--IEVLNNIGVIHFE 460
           + I     D+G+  + ++ G   DA     K+ +  L K G+  P    + + IG ++  
Sbjct: 200 SIIANTYRDIGQ--VYNNQGKYDDALSVYNKSLKITLTKLGDNHPSIANIYDKIGQVYCH 257

Query: 461 KGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVEL 520
           +G+++ A   F  +L     LT LD      +I   A+   ++D+   +  +   +    
Sbjct: 258 QGKYDDALPVFNKSLK--TQLTQLDENHPMEIILIIANT--YRDIGQVYNNQGKYDDALS 313

Query: 521 PWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQD-YVDAY--------LRLAAIAKA 571
            +NK ++   L +L +  H ++A +      ++  QD Y DA         ++L  +   
Sbjct: 314 AYNK-SLKITLTKLGDN-HPSIANTYDNIGQVYNNQDKYDDALSLYYKSLKIKLTQLGDN 371

Query: 572 RNNLQLSIELVNEALKVNGKYPNALSMLG-DLELK----NDDWVKAKETFRAASDATDGK 626
             ++ ++   + +A    GKY  ALSML   L+++     D+     +T+   + A + +
Sbjct: 372 HPSIAITYNNIGKAYSDQGKYDEALSMLNKSLKIRLVQLGDNHPSIADTYNNIARAYNSQ 431

Query: 627 DSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLA 686
             Y            AL    ++ K++ T L             H +     NG G V  
Sbjct: 432 GKYDN----------ALSVYNKSLKIQLTQLGD----------NHPNTAITYNGIGNVYV 471

Query: 687 EKGQFDVSKDLFT---QVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLR 742
             G+ D +  ++    +++ A  G       +++ N+  +   QGN+  A+ M    L+
Sbjct: 472 NLGKQDDALSVYKKSLKIELAQPGENHPYTAEIYNNIGQMNIYQGNYDSALLMLNKSLK 530



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 84/400 (21%), Positives = 163/400 (40%), Gaps = 72/400 (18%)

Query: 93   YTYLGKIETKQREKEEHFILATQYYNKA-----SRIDMHEPS---TWVGKGQLLLAKGEV 144
            Y  +G++   Q + ++    A   YNK+     +R+  + P+   T+   GQ+   +G+ 
Sbjct: 885  YNKIGQVYNNQGKYDD----ALSVYNKSLKITLTRLGDNHPNITKTYGDIGQVYNDQGKY 940

Query: 145  EQASSAF----KIVLEADRDNVPALLGQ----ACVEFNRGRYSDSLEFYKRALQVHPSCP 196
            + A S +    KI L    DN P++         V   +G+Y D+L  + ++L++  +  
Sbjct: 941  DDALSVYNKSLKITLTKFDDNHPSIAKTYDNIGLVYNKQGKYDDALSVHNKSLKIKLTRL 1000

Query: 197  GAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEK 256
            G     I +    +GQ+   +  +  AL +        + + +  L  N           
Sbjct: 1001 GDNHQSIAITYRNIGQVYNDQGKYNEALSM----FNKSLKITIKQLGNN----------- 1045

Query: 257  MQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVT------NHGPTKSHSYYN 310
                   +P  A   N +   +   G++     +   +L +T      NH P  +++Y +
Sbjct: 1046 -------HPSIANTYNKIGQIYNRQGKYDDALSIHNKSLKITLTRLGDNH-PNIANTYGS 1097

Query: 311  LARSYHSKGDYEKAGLYYMASVK----EINKPHEFIFPYY-GLGQVQLKLGDFRSALTNF 365
            + + Y+++G Y+ A   Y  S+K    ++   H  I   Y  +GQV  +   +  AL+ +
Sbjct: 1098 IGQVYNNQGKYDDALSVYNKSLKITLTKLGDNHPSIANTYDNIGQVYNRQDKYDDALSVY 1157

Query: 366  EKVLEI--------YPDNCETLKALGHIYVQLGQIEKAQELLRKAAKI--------DPRD 409
             K L+I        +P    T   +G +    G+ ++A  +L K+ KI         P  
Sbjct: 1158 YKSLKIKLTRLGDNHPSIAMTCNNIGKVCSYQGKYDEALSMLNKSLKIRLLQLGHNHPSI 1217

Query: 410  AQAFIDLGELLI-SSDTGAALDAFKTA-RTLLKKAGEEVP 447
            +  + D+G++    S    AL  FK + +  L   GE  P
Sbjct: 1218 SITYSDIGQVYNRQSKYDDALSMFKKSLQVSLVTLGENHP 1257


>gi|427735486|ref|YP_007055030.1| hypothetical protein Riv7116_1944 [Rivularia sp. PCC 7116]
 gi|427370527|gb|AFY54483.1| tetratricopeptide repeat protein [Rivularia sp. PCC 7116]
          Length = 314

 Score = 66.2 bits (160), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 70/269 (26%), Positives = 111/269 (41%), Gaps = 46/269 (17%)

Query: 154 VLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS-CPGAIRLGIGLCRYKLGQ 212
           + +  R+     L Q       GR  D++  +K+A+Q+ PS  P    LG+ L +  +GQ
Sbjct: 43  IAQYTRNTATTYLNQGLQLIQTGRPQDAINAFKQAIQLDPSLAPAYYNLGLALRQ--VGQ 100

Query: 213 LGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALN 272
           L  A  AF +A +++P+   A   L    L+ N    + +    +QR+ EI         
Sbjct: 101 LQPAADAFYQATRVNPKFALAYANLGGALLEGNN---LGQAENYLQRSLEI--------- 148

Query: 273 YLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASV 332
                              ++ L V         +YYNL   +  K D  KA   +  ++
Sbjct: 149 -------------------DSKLGV---------AYYNLGLLHQQKEDCSKAVKSFRKAM 180

Query: 333 KEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQI 392
           K  NK  E   P Y +G   ++   F+ A T F + +++ P   E    LG I    G+ 
Sbjct: 181 KYSNKAPE---PAYQIGLCYMQERKFKRAKTAFNQAIKMNPKYPEAHYNLGSILYTQGKH 237

Query: 393 EKAQELLRKAAKIDPRDAQAFIDLGELLI 421
           E+A E  RKAA+ DP    A+   G   I
Sbjct: 238 EQALEAFRKAAEADPDYPSAYYGAGLAFI 266



 Score = 43.5 bits (101), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 30/124 (24%), Positives = 64/124 (51%), Gaps = 6/124 (4%)

Query: 353 LKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQA 412
           ++ G  + A+  F++ +++ P        LG    Q+GQ++ A +   +A +++P+ A A
Sbjct: 62  IQTGRPQDAINAFKQAIQLDPSLAPAYYNLGLALRQVGQLQPAADAFYQATRVNPKFALA 121

Query: 413 FIDL-GELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSF 471
           + +L G LL  ++ G A +  + +  +  K G         N+G++H +K +   A +SF
Sbjct: 122 YANLGGALLEGNNLGQAENYLQRSLEIDSKLG-----VAYYNLGLLHQQKEDCSKAVKSF 176

Query: 472 KDAL 475
           + A+
Sbjct: 177 RKAM 180


>gi|257094060|ref|YP_003167701.1| hypothetical protein CAP2UW1_2484 [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257046584|gb|ACV35772.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
          Length = 784

 Score = 66.2 bits (160), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 69/245 (28%), Positives = 112/245 (45%), Gaps = 20/245 (8%)

Query: 96  LGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVL 155
           LG I +++RE E     A   Y +A+++D      WV  GQ  + +G+  +A+ A +  L
Sbjct: 532 LGSIASERREWER----AENAYARATQLDGKLADDWVALGQARVQRGKAAEAAEALQRAL 587

Query: 156 EADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGK 215
             +     A    + +   RG Y+ +LE+ +RA Q+ P+   A     G    KL + G+
Sbjct: 588 AINPSQGTAYQALSALHGRRGDYTKALEYGERATQLEPTDYQAWS-NKGYSLLKLQRPGE 646

Query: 216 ARQAFQRALQLDPENVEALVALA---VMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALN 272
           A  AF+ AL+L P+   A + L    +   Q  EA      +  +++A E+ P  + A  
Sbjct: 647 AVPAFETALRLKPDFANAWINLGEAKIAQRQMGEA------IAALRKALELSPGASDARL 700

Query: 273 YLANHFFFTGQHFLV-EQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMAS 331
           YL + +   GQ  L  EQ T  A  V    P     +Y +A +    GD E A +   A 
Sbjct: 701 YLTSAYIGAGQFALAREQATLLAEKV----PQVPQVWYLMAVANAGLGDREAA-IAAHAR 755

Query: 332 VKEIN 336
           +K +N
Sbjct: 756 LKSLN 760



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 74/293 (25%), Positives = 119/293 (40%), Gaps = 10/293 (3%)

Query: 105 EKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPA 164
           EK   +  A Q Y KA  ID   P  W   G +L   G  ++A+ AF+  +E +     A
Sbjct: 435 EKAGRYREAEQAYRKALAIDPRLPEAWHNLGLVLRRSGRDDEAAKAFETAIELNPRATGA 494

Query: 165 LLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRAL 224
            +  A +    GR +++ E   RA +   +   A RL +G    +  +  +A  A+ RA 
Sbjct: 495 TIMLAELRQRAGRTAEAAELAARACEAADAQVAACRL-LGSIASERREWERAENAYARAT 553

Query: 225 QLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQH 284
           QLD +  +  VAL    +Q  +AA   +  E +QRA  I P    A   L+      G +
Sbjct: 554 QLDGKLADDWVALGQARVQRGKAA---EAAEALQRALAINPSQGTAYQALSALHGRRGDY 610

Query: 285 FLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFP 344
               +  E A   T   PT   ++ N     +S    ++ G    A    +    +F   
Sbjct: 611 TKALEYGERA---TQLEPTDYQAWSN---KGYSLLKLQRPGEAVPAFETALRLKPDFANA 664

Query: 345 YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQE 397
           +  LG+ ++       A+    K LE+ P   +    L   Y+  GQ   A+E
Sbjct: 665 WINLGEAKIAQRQMGEAIAALRKALELSPGASDARLYLTSAYIGAGQFALARE 717



 Score = 44.7 bits (104), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 83/353 (23%), Positives = 143/353 (40%), Gaps = 26/353 (7%)

Query: 90  GVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASS 149
           G Y+  LG         +E    A   Y  A R    + S W G   L  A G+ ++A+ 
Sbjct: 321 GYYWGLLGDALRGLARPDE----AASAYATALRFSPGQASVWEGWADLAAAAGQGDEAAE 376

Query: 150 AFKIV--LEADRDNVPALLGQACVEFNRGRYSD-SLEFYKRALQVHPSCPGAIRLGIGLC 206
            +++   L  + D +   L QA V    G  +   L   K + +   +        +G  
Sbjct: 377 RYRVAVRLAPNADGLRRKLAQALVLRGEGAAAGRELAAVKDSGKADDA---KAWNNVGTG 433

Query: 207 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQA---NEAAGIRKGMEKMQRAFEI 263
             K G+  +A QA+++AL +DP   EA   L ++  ++   +EAA      +  + A E+
Sbjct: 434 EEKAGRYREAEQAYRKALAIDPRLPEAWHNLGLVLRRSGRDDEAA------KAFETAIEL 487

Query: 264 YPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEK 323
            P    A   LA      G+     +L   A    +          ++A     + ++E+
Sbjct: 488 NPRATGATIMLAELRQRAGRTAEAAELAARACEAADAQVAACRLLGSIA---SERREWER 544

Query: 324 AGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALG 383
           A   Y  + +   K       +  LGQ +++ G    A    ++ L I P      +AL 
Sbjct: 545 AENAYARATQLDGK---LADDWVALGQARVQRGKAAEAAEALQRALAINPSQGTAYQALS 601

Query: 384 HIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG-ELLISSDTGAALDAFKTA 435
            ++ + G   KA E   +A +++P D QA+ + G  LL     G A+ AF+TA
Sbjct: 602 ALHGRRGDYTKALEYGERATQLEPTDYQAWSNKGYSLLKLQRPGEAVPAFETA 654


>gi|405973205|gb|EKC37931.1| hypothetical protein CGI_10009705 [Crassostrea gigas]
          Length = 749

 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 94/408 (23%), Positives = 171/408 (41%), Gaps = 32/408 (7%)

Query: 79  RYERIAILNALGV--------YYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPST 130
           R ER A  + L +         Y+ LG +  ++ + +E    A + Y  A R+       
Sbjct: 56  RLERSAYFSQLAIKQNPMLAEAYSNLGNVFKERGQLQE----ALENYRHAVRLKPDFIDG 111

Query: 131 WVGKGQLLLAKGEVEQASSAFKIVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRA 188
           ++     L+A G++EQA  A+   L+ + D   V + LG        GR  ++   Y +A
Sbjct: 112 YINLAAALVAAGDMEQAVQAYVTALQYNPDLYCVRSDLGNLLKAL--GRLDEAKTCYLKA 169

Query: 189 LQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAA 248
           ++  P+   A    +G      G++  A   F++A+ LDP  ++A + L  +     EA 
Sbjct: 170 IETQPNFAVAWS-NLGCVFNAQGEIWLAIHHFEKAVALDPNFLDAYINLGNV---LKEAR 225

Query: 249 GIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSY 308
              + +    RA  + P  A+    LA  ++  G   L++   +T        P    +Y
Sbjct: 226 IFDRAVAAYLRALNLSPNHAVVHGNLACVYYEQG---LIDLAIDTYKRAIELQPNFPDAY 282

Query: 309 YNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKV 368
            NLA +   KG   +A   Y  ++K ++  H        L  ++ + G+   A+  + K 
Sbjct: 283 CNLANALKEKGKVVEAEECYNTALK-LSPTHADSL--NNLANIKREQGNTEEAVKLYLKA 339

Query: 369 LEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGA 427
           LE+YP+       L  +  Q G++ +A    ++A +I P  A A+ ++G  L    D   
Sbjct: 340 LEVYPEFAVAHSNLASVLQQQGKLHEALMHYKEAIRISPTFADAYSNMGNTLKEMQDIQG 399

Query: 428 ALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
           AL  +  A  +          +  +N+  IH + G    A  S++ AL
Sbjct: 400 ALQCYTRAIQI-----NPAFADAHSNLASIHKDSGNIPEAIASYRTAL 442



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 70/332 (21%), Positives = 134/332 (40%), Gaps = 48/332 (14%)

Query: 89  LGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQAS 148
             V ++ LG +   Q E      LA  ++ KA  +D +    ++  G +L      ++A 
Sbjct: 176 FAVAWSNLGCVFNAQGE----IWLAIHHFEKAVALDPNFLDAYINLGNVLKEARIFDRAV 231

Query: 149 SAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRY 208
           +A+   L    ++       ACV + +G    +++ YKRA+++ P+ P A    +     
Sbjct: 232 AAYLRALNLSPNHAVVHGNLACVYYEQGLIDLAIDTYKRAIELQPNFPDAY-CNLANALK 290

Query: 209 KLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCA 268
           + G++ +A + +  AL+L P + ++L  LA +     E     + ++   +A E+YP  A
Sbjct: 291 EKGKVVEAEECYNTALKLSPTHADSLNNLANIK---REQGNTEEAVKLYLKALEVYPEFA 347

Query: 269 MALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYY 328
           +A                                   HS  NLA     +G   +A ++Y
Sbjct: 348 VA-----------------------------------HS--NLASVLQQQGKLHEALMHY 370

Query: 329 MASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQ 388
             +++       F   Y  +G    ++ D + AL  + + ++I P   +    L  I+  
Sbjct: 371 KEAIR---ISPTFADAYSNMGNTLKEMQDIQGALQCYTRAIQINPAFADAHSNLASIHKD 427

Query: 389 LGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 420
            G I +A    R A K+ P    A+ +L   L
Sbjct: 428 SGNIPEAIASYRTALKLKPDFPDAYCNLAHCL 459



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 97/454 (21%), Positives = 190/454 (41%), Gaps = 29/454 (6%)

Query: 160 DNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQA 219
           DN   LL  + + F   R   S  F + A++ +P    A    +G    + GQL +A + 
Sbjct: 39  DNTGVLLLLSSIHFQCRRLERSAYFSQLAIKQNPMLAEAYS-NLGNVFKERGQLQEALEN 97

Query: 220 FQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYP--YCAMALNYLANH 277
           ++ A++L P+ ++  + LA   + A +   + + ++    A +  P  YC  +   L N 
Sbjct: 98  YRHAVRLKPDFIDGYINLAAALVAAGD---MEQAVQAYVTALQYNPDLYCVRS--DLGNL 152

Query: 278 FFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINK 337
               G+   +++     L      P  + ++ NL   ++++G+   A  ++    K +  
Sbjct: 153 LKALGR---LDEAKTCYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFE---KAVAL 206

Query: 338 PHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQE 397
              F+  Y  LG V  +   F  A+  + + L + P++      L  +Y + G I+ A +
Sbjct: 207 DPNFLDAYINLGNVLKEARIFDRAVAAYLRALNLSPNHAVVHGNLACVYYEQGLIDLAID 266

Query: 398 LLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVI 457
             ++A ++ P    A+ +L   L   + G  ++A +   T LK +      + LNN+  I
Sbjct: 267 TYKRAIELQPNFPDAYCNLANAL--KEKGKVVEAEECYNTALKLSPTHA--DSLNNLANI 322

Query: 458 HFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDAS-ASMLQFKDMQLFHRFENDGN 516
             E+G  E A +         ++L  L+   +  V  ++ AS+LQ +  +L     +   
Sbjct: 323 KREQGNTEEAVK---------LYLKALEVYPEFAVAHSNLASVLQ-QQGKLHEALMHYKE 372

Query: 517 HVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQ 576
            + +         N+   L+++ D   A   Y   +     + DA+  LA+I K   N+ 
Sbjct: 373 AIRISPTFADAYSNMGNTLKEMQDIQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIP 432

Query: 577 LSIELVNEALKVNGKYPNALSMLGDLELKNDDWV 610
            +I     ALK+   +P+A   L        DW 
Sbjct: 433 EAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWT 466


>gi|431914414|gb|ELK15671.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
           110 kDa subunit [Pteropus alecto]
          Length = 1046

 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 104/479 (21%), Positives = 189/479 (39%), Gaps = 29/479 (6%)

Query: 142 GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 201
           G+ E A      +   + DN   LL  + + F   R   S  F   A++ +P    A   
Sbjct: 35  GDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYS- 93

Query: 202 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 261
            +G    + GQL +A + ++ AL+L P+ ++  + LA   + A +  G    ++    A 
Sbjct: 94  NLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEG---AVQAYVSAL 150

Query: 262 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 319
           +  P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G
Sbjct: 151 QYNPDLYCVRS--DLGNLLKALGR---LEEAKACYLKAIETQPNFAVAWSNLGCVFNAQG 205

Query: 320 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 379
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++    
Sbjct: 206 EIWLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVH 262

Query: 380 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGA-ALDAFKTARTL 438
             L  +Y + G I+ A +  R+A ++ P    A+ +L   L    + A A D + TA  L
Sbjct: 263 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRL 322

Query: 439 LKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASAS 498
                +      LNN+  I  E+G  E A + ++ AL       +       +   AS  
Sbjct: 323 CPTHADS-----LNNLANIKREQGNIEEAVRLYRKAL------EVFPEFAAAHSNLASVL 371

Query: 499 MLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDY 558
             Q K  +    ++     + +         N+   L+++ D   A   Y   +     +
Sbjct: 372 QQQGKLQEALMHYKEA---IRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAF 428

Query: 559 VDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFR 617
            DA+  LA+I K   N+  +I     ALK+   +P+A   L        DW    E  +
Sbjct: 429 ADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMK 487



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 86/386 (22%), Positives = 164/386 (42%), Gaps = 24/386 (6%)

Query: 93  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 152
           Y+ LG +  ++ + +E    A ++Y  A R+       ++     L+A G++E A  A+ 
Sbjct: 92  YSNLGNVYKERGQLQE----AIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 147

Query: 153 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 210
             L+ + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 148 SALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIETQPNFAVAWS-NLGCVFNAQ 204

Query: 211 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 270
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 205 GEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAAYLRALSLSPNHAVV 261

Query: 271 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 330
              LA  ++  G   L       A+ +  H P    +Y NLA +   KG   +A   Y  
Sbjct: 262 HGNLACVYYEQGLIDLAIDTYRRAIELQPHFPD---AYCNLANALKEKGSVAEAEDCYNT 318

Query: 331 SVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLG 390
           +++      + +     L  ++ + G+   A+  + K LE++P+       L  +  Q G
Sbjct: 319 ALRLCPTHADSL---NNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQG 375

Query: 391 QIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGEEVPIE 449
           ++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +          +
Sbjct: 376 KLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA-----D 430

Query: 450 VLNNIGVIHFEKGEFESAHQSFKDAL 475
             +N+  IH + G    A  S++ AL
Sbjct: 431 AHSNLASIHKDSGNIPEAIASYRTAL 456



 Score = 42.0 bits (97), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 76/347 (21%), Positives = 140/347 (40%), Gaps = 57/347 (16%)

Query: 278 FFFTGQHFLVEQLTETA----LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK 333
              +  HF   +L  +A    LA+    P  + +Y NL   Y  +G  ++A  +Y  +++
Sbjct: 59  LLLSSIHFQCRRLDRSAHFSTLAI-KQNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALR 117

Query: 334 EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIE 393
              KP +FI  Y  L    +  GD   A+  +   L+  PD       LG++   LG++E
Sbjct: 118 L--KP-DFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLE 174

Query: 394 KAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNN 453
           +A+    KA +  P  A A+ +LG                    +    GE         
Sbjct: 175 EAKACYLKAIETQPNFAVAWSNLG-------------------CVFNAQGEIW------- 208

Query: 454 IGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVID-ASASMLQFKDMQLFHRFE 512
           + + HFEK    +   +F DA     ++ L +   +  + D A A+ L+   +       
Sbjct: 209 LAIHHFEKAV--TLDPNFLDA-----YINLGNVLKEARIFDRAVAAYLRALSLS------ 255

Query: 513 NDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKAR 572
              NH  +  N   V +    L++   DT      YR  +     + DAY  LA   K +
Sbjct: 256 --PNHAVVHGNLACVYYEQG-LIDLAIDT------YRRAIELQPHFPDAYCNLANALKEK 306

Query: 573 NNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAA 619
            ++  + +  N AL++   + ++L+ L +++ +  +  +A   +R A
Sbjct: 307 GSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKA 353


>gi|196013721|ref|XP_002116721.1| hypothetical protein TRIADDRAFT_60779 [Trichoplax adhaerens]
 gi|190580699|gb|EDV20780.1| hypothetical protein TRIADDRAFT_60779 [Trichoplax adhaerens]
          Length = 1397

 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 123/638 (19%), Positives = 271/638 (42%), Gaps = 103/638 (16%)

Query: 154  VLEADRDNVPALLGQACVEFNR-GRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQ 212
            +LE +  ++ A      V + +  +Y +++  ++++L++  S  G     +      +G+
Sbjct: 596  ILENNHPDIAASYNNIGVVYRKQTKYEEAISMFEKSLEIQSSALGYNHPEVAKSYSNMGK 655

Query: 213  LGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALN 272
            +   +  ++ A+ +  ++++  + L+ +    +E A   K  + +    E+Y   + ++ 
Sbjct: 656  VYWKQSKYENAISMYEKSLK--IRLSTLGSNHSEVA---KSYDDLG---EVYRKQSKSME 707

Query: 273  YLANHFFFTGQHFLVEQLTETALAVTNHG-PTKSHSYYNLARSYHSKGDYEKAGLYYMAS 331
             L+          + E+  +  L+V  H  P  + SY N+  +Y  +G +E+A   Y  S
Sbjct: 708  ALS----------MYEKSLKIRLSVFGHNHPASAQSYNNIGLAYCDQGKHEEAISMYEKS 757

Query: 332  VK----EINKPHEFIFPYYG-LGQVQLKLGDFRSALTNFEKVLEI--------YPDNCET 378
            +K     +N  H  I   YG LG        +  A++ ++K LE+        +PD  +T
Sbjct: 758  LKIQLSVLNHNHPDIAMAYGNLGIAYSLQAKYEEAISMYKKSLELQLLAFGTNHPDVAKT 817

Query: 379  LKALGHIYVQLGQIEKAQELLRKAAKID--------PRDAQAFIDLGELLISSDTGA-AL 429
               +G +Y   G+ E+A  +  K+ KI         P   + + ++G +    D    A+
Sbjct: 818  YNNMGTVYSDQGKYEEAISMYNKSLKIKLSIFDHNHPEVDKLYNNMGIVYFHQDKHVEAI 877

Query: 430  DAF-KTARTLLKKAGE--EVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDS 486
              F K  + +L   G   E      NN+G ++  +G++E A   ++ +L   I +++LD 
Sbjct: 878  RIFEKCLKIVLLIFGHNHERVAATYNNMGNVYKNQGKYEEAISMYEKSLK--IQMSVLDH 935

Query: 487  K----TKTYVIDASASMLQFKDMQLFHRFEND---------GNHVELP--WNKVTVLFNL 531
                   +Y    +A   Q K  +    +E            NH ++   ++ + ++++ 
Sbjct: 936  NHPDVAASYNNMGNAYKNQGKHEEAIAMYEKSLKIRSLVLSHNHPDIAALYDNIGIVYSC 995

Query: 532  ARLLEQIHDTVAASVLYRLILF--KYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVN 589
                E+ +  +  S+  RL ++  K+ D   +Y  +  + + ++  + +I +  ++LK+ 
Sbjct: 996  QGKYEKANSALEKSLKIRLSVYDSKHPDIAASYNNMGEVYRQQSKHKEAISMFEKSLKIR 1055

Query: 590  GKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRNEKRA 649
                  LS+LGD                   +  D   SY  +    WN         + 
Sbjct: 1056 ------LSVLGD-------------------NHCDTAASYNNIGEVYWN---------QG 1081

Query: 650  PKLEATHL-EKAKELYTRVI-VQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQ---VQEA 704
               EA ++ EK+ E+   V+   H+    + N  G+V  ++G ++ +  ++ +   ++ +
Sbjct: 1082 NHEEAIYMHEKSLEIRLSVLGCNHSDVAQSYNNIGLVYYDQGNYEEALPMYQKSLKIRLS 1141

Query: 705  ASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLR 742
              G     +   + N+  VY+AQGN   A+ MY+  L+
Sbjct: 1142 VLGHEHSAVAQSYNNIGAVYYAQGNHEEALSMYEKSLK 1179


>gi|425465206|ref|ZP_18844516.1| putative glycosyl transferase [Microcystis aeruginosa PCC 9809]
 gi|389832591|emb|CCI23651.1| putative glycosyl transferase [Microcystis aeruginosa PCC 9809]
          Length = 562

 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 73/297 (24%), Positives = 134/297 (45%), Gaps = 27/297 (9%)

Query: 134 KGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHP 193
           +G  LLA GE E A SA++ VL    ++  A +  A V  ++ RYS++L+ Y R   V+ 
Sbjct: 44  QGDQLLAAGEKESALSAYRTVLSFHENSAQAHIKIAQVLQSQKRYSEALQAYDRGFIVNH 103

Query: 194 SCP-----GAIRLGIGLCRYKLGQLGKARQAFQRALQLDPE-NVEALVALAVMDLQA-NE 246
             P         + +G    +  +  +A  A+Q+A+ + P    +  +  A+  LQ  +E
Sbjct: 104 KPPMEPSQSNYLVALGDIFAQEEKWSEAIDAYQKAMIIKPTFKAQFQLGKALYSLQRWDE 163

Query: 247 AAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG----P 302
           AA      + +Q A  + P    A       +F+ G+ +  +QL + A           P
Sbjct: 164 AA------KALQAAVFLDPTQGKA-------YFYLGKAYSEQQLWQEASYAYQQALELIP 210

Query: 303 TKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSAL 362
           ++  +Y  L  +   +G +++A   Y  ++    K  +    Y  LG+   + G    A+
Sbjct: 211 SQGETYKKLGETLAKQGKWQEAEQIYRQALIYTPKDGDI---YNYLGKALAEQGKLGEAM 267

Query: 363 TNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGEL 419
             F++  +I P N    + L +IY+  GQI++     R+A +IDP  ++    L E+
Sbjct: 268 AVFQQARQISPKNANIYENLCYIYINSGQIDEGLNWCRQAVEIDPNLSEVRFILQEI 324


>gi|326436271|gb|EGD81841.1| kinesin light chain isoform 1 [Salpingoeca sp. ATCC 50818]
          Length = 659

 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/236 (27%), Positives = 97/236 (41%), Gaps = 30/236 (12%)

Query: 262 EIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAV-----TNHGPTKSHSYYNLARSYH 316
           E +P  A   N L   +   G+H       E ALA+         P+ + SY NL  +YH
Sbjct: 172 EKHPSTANTYNNLGLAYDSKGEHARGIHYYEKALAIRVETLGEKHPSTATSYNNLGSAYH 231

Query: 317 SKGDYEKAGLYYMAS----VKEINKPHEFIF-PYYGLGQVQLKLGDFRSALTNFEKVLEI 371
           SKGDY++A  +Y  +    V+ + + H      Y GLG      G++  A+  +EK L I
Sbjct: 232 SKGDYDRAIAFYEKALAIRVEMLGEKHPSTADSYLGLGNAYYSKGEYDKAIAFYEKALAI 291

Query: 372 --------YPDNCETLKALGHIYVQLGQIEKAQELLRKAAKID--------PRDAQAFID 415
                   +P    T   LG  Y   G+ +KA     KA  I         P  A  + +
Sbjct: 292 TVETLGEKHPSTASTYNNLGSAYYSKGEYDKAIAFYEKALAITVETLGEKHPSTASTYNN 351

Query: 416 LGELLISSDTGAALDAF--KTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESA 467
           LG    S        AF  K     ++  GE+ P   +   N+G+ +  KG+++ A
Sbjct: 352 LGSAYYSKGEYDKAIAFYEKALAITVETLGEKHPSTADTYGNLGIAYHSKGDYDRA 407



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 80/340 (23%), Positives = 133/340 (39%), Gaps = 68/340 (20%)

Query: 174 NRGRYSDSLEFYKRALQV--------HPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 225
           ++G Y  ++ +Y++AL V        HPS        +GL     G+  +    +++AL 
Sbjct: 148 SKGEYDKAIAYYEKALAVFVETLGEKHPSTANTYN-NLGLAYDSKGEHARGIHYYEKALA 206

Query: 226 LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 285
           +    VE L                           E +P  A + N L + +   G + 
Sbjct: 207 I---RVETL--------------------------GEKHPSTATSYNNLGSAYHSKGDYD 237

Query: 286 LVEQLTETALAV-----TNHGPTKSHSYYNLARSYHSKGDYEKAGLYY----MASVKEIN 336
                 E ALA+         P+ + SY  L  +Y+SKG+Y+KA  +Y      +V+ + 
Sbjct: 238 RAIAFYEKALAIRVEMLGEKHPSTADSYLGLGNAYYSKGEYDKAIAFYEKALAITVETLG 297

Query: 337 KPHEFIFPYY-GLGQVQLKLGDFRSALTNFEKVLEI--------YPDNCETLKALGHIYV 387
           + H      Y  LG      G++  A+  +EK L I        +P    T   LG  Y 
Sbjct: 298 EKHPSTASTYNNLGSAYYSKGEYDKAIAFYEKALAITVETLGEKHPSTASTYNNLGSAYY 357

Query: 388 QLGQIEKAQELLRKAAKID--------PRDAQAFIDLGELLIS-SDTGAALDAFKTARTL 438
             G+ +KA     KA  I         P  A  + +LG    S  D   A+   +    +
Sbjct: 358 SKGEYDKAIAFYEKALAITVETLGEKHPSTADTYGNLGIAYHSKGDYDRAIHFHEKDLAI 417

Query: 439 LKKA-GEEVPIEVLN--NIGVIHFEKGEFESAHQSFKDAL 475
             +A GE+ P    +  NIG+++ ++G+ E A    + AL
Sbjct: 418 TVEALGEKHPSVATSYFNIGLLYDKRGDKEQACAYIQHAL 457



 Score = 47.4 bits (111), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 55/215 (25%), Positives = 86/215 (40%), Gaps = 27/215 (12%)

Query: 288 EQLTETALAVTNH--GPTKSHSYYNLARSYHSKGDYEKAGLYYMAS----VKEINKPHEF 341
           E  T     + NH  G   + ++ NL  +Y SKG+Y+KA  YY  +    V+ + + H  
Sbjct: 117 EDSTGAFAGLCNHVGGERGADTFGNLGIAYASKGEYDKAIAYYEKALAVFVETLGEKHPS 176

Query: 342 IF-PYYGLGQVQLKLGDFRSALTNFEKVLEI--------YPDNCETLKALGHIYVQLGQI 392
               Y  LG      G+    +  +EK L I        +P    +   LG  Y   G  
Sbjct: 177 TANTYNNLGLAYDSKGEHARGIHYYEKALAIRVETLGEKHPSTATSYNNLGSAYHSKGDY 236

Query: 393 EKAQELLRKAAKI--------DPRDAQAFIDLGELLISSDTGAALDAF--KTARTLLKKA 442
           ++A     KA  I         P  A +++ LG    S        AF  K     ++  
Sbjct: 237 DRAIAFYEKALAIRVEMLGEKHPSTADSYLGLGNAYYSKGEYDKAIAFYEKALAITVETL 296

Query: 443 GEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDAL 475
           GE+ P      NN+G  ++ KGE++ A   ++ AL
Sbjct: 297 GEKHPSTASTYNNLGSAYYSKGEYDKAIAFYEKAL 331



 Score = 42.0 bits (97), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 61/241 (25%), Positives = 98/241 (40%), Gaps = 53/241 (21%)

Query: 113 ATQYYNKA--SRIDM---HEPST---WVGKGQLLLAKGEVEQA----SSAFKIVLEADRD 160
           A  +Y KA   R++M     PST   ++G G    +KGE ++A      A  I +E   +
Sbjct: 239 AIAFYEKALAIRVEMLGEKHPSTADSYLGLGNAYYSKGEYDKAIAFYEKALAITVETLGE 298

Query: 161 NVPAL------LGQACVEFNRGRYSDSLEFYKRALQV--------HPSCPGAIRLGIGLC 206
             P+       LG A   +++G Y  ++ FY++AL +        HPS        +G  
Sbjct: 299 KHPSTASTYNNLGSA--YYSKGEYDKAIAFYEKALAITVETLGEKHPSTASTYN-NLGSA 355

Query: 207 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY 266
            Y  G+  KA   +++AL +    VE L                    EK     + Y  
Sbjct: 356 YYSKGEYDKAIAFYEKALAI---TVETL-------------------GEKHPSTADTYGN 393

Query: 267 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGL 326
             +A  Y +   +    HF  + L  T  A+    P+ + SY+N+   Y  +GD E+A  
Sbjct: 394 LGIA--YHSKGDYDRAIHFHEKDLAITVEALGEKHPSVATSYFNIGLLYDKRGDKEQACA 451

Query: 327 Y 327
           Y
Sbjct: 452 Y 452


>gi|197102526|ref|NP_001127296.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
           110 kDa subunit [Pongo abelii]
 gi|55727502|emb|CAH90506.1| hypothetical protein [Pongo abelii]
          Length = 471

 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 86/386 (22%), Positives = 164/386 (42%), Gaps = 24/386 (6%)

Query: 93  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 152
           Y+ LG +  ++ + +E    A ++Y  A R+       ++     L+A G++E A  A+ 
Sbjct: 92  YSNLGNVYKERGQLQE----AIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 147

Query: 153 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 210
             L+ + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 148 SALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIETQPNFAVAWS-NLGCVFNAQ 204

Query: 211 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 270
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 205 GEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAAYLRALSLSPNHAVV 261

Query: 271 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 330
              LA  ++  G   L       A+ +  H P    +Y NLA +   KG   +A   Y  
Sbjct: 262 HGNLACVYYEQGLIDLAIDTYRRAIELQPHFPD---AYCNLANALKEKGSVAEAEDCYNT 318

Query: 331 SVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLG 390
           +++      + +     L  ++ + G+   A+  + K LE++P+       L  +  Q G
Sbjct: 319 ALRLCPTHADSL---NNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQG 375

Query: 391 QIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGEEVPIE 449
           ++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +          +
Sbjct: 376 KLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQI-----NPAFAD 430

Query: 450 VLNNIGVIHFEKGEFESAHQSFKDAL 475
             +N+  IH + G    A  S++ AL
Sbjct: 431 AHSNLASIHKDSGNIPEAIASYRTAL 456



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 102/462 (22%), Positives = 189/462 (40%), Gaps = 29/462 (6%)

Query: 142 GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 201
           G+ E A      +   + DN   LL  + + F   R   S  F   A++ +P    A   
Sbjct: 35  GDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDGSAHFSTLAIKQNPLLAEAYS- 93

Query: 202 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 261
            +G    + GQL +A + ++ AL+L P+ ++  + LA   + A +  G    ++    A 
Sbjct: 94  NLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEG---AVQAYVSAL 150

Query: 262 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 319
           +  P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G
Sbjct: 151 QYNPDLYCVRS--DLGNLLKALGR---LEEAKACYLKAIETQPNFAVAWSNLGCVFNAQG 205

Query: 320 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 379
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++    
Sbjct: 206 EIWLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVH 262

Query: 380 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGA-ALDAFKTARTL 438
             L  +Y + G I+ A +  R+A ++ P    A+ +L   L    + A A D + TA  L
Sbjct: 263 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRL 322

Query: 439 LKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASAS 498
                +      LNN+  I  E+G  E A + ++ AL   ++     + +        AS
Sbjct: 323 CPTHADS-----LNNLANIKREQGNIEEAVRLYRKALE--VFPEFAAAHSNL------AS 369

Query: 499 MLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDY 558
           +LQ +  +L     +    + +         N+   L+++ D   A   Y   +     +
Sbjct: 370 VLQ-QQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAF 428

Query: 559 VDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLG 600
            DA+  LA+I K   N+  +I     ALK+   +P+A   L 
Sbjct: 429 ADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLA 470



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 78/361 (21%), Positives = 150/361 (41%), Gaps = 53/361 (14%)

Query: 278 FFFTGQHFLVEQLTETA----LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK 333
              +  HF   +L  +A    LA+  + P  + +Y NL   Y  +G  ++A  +Y  +++
Sbjct: 59  LLLSSIHFQCRRLDGSAHFSTLAIKQN-PLLAEAYSNLGNVYKERGQLQEAIEHYRHALR 117

Query: 334 EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIE 393
              KP +FI  Y  L    +  GD   A+  +   L+  PD       LG++   LG++E
Sbjct: 118 L--KP-DFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLE 174

Query: 394 KAQELLRKAAKIDPRDAQAFIDLG----------------ELLISSDTGAALDAFKTART 437
           +A+    KA +  P  A A+ +LG                E  ++ D    LDA+     
Sbjct: 175 EAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPN-FLDAYINLGN 233

Query: 438 LLKKAG---------------EEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLT 482
           +LK+A                      V  N+  +++E+G  + A  +++ A+       
Sbjct: 234 VLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAI------- 286

Query: 483 LLDSKTKTYVIDASASMLQ-FKDMQLFHRFENDGNH-VELPWNKVTVLFNLARLLEQIHD 540
               + + +  DA  ++    K+       E+  N  + L       L NLA +  +  +
Sbjct: 287 ----ELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGN 342

Query: 541 TVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLG 600
              A  LYR  L  + ++  A+  LA++ + +  LQ ++    EA++++  + +A S +G
Sbjct: 343 IEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMG 402

Query: 601 D 601
           +
Sbjct: 403 N 403


>gi|54298485|ref|YP_124854.1| hypothetical protein lpp2549 [Legionella pneumophila str. Paris]
 gi|397668165|ref|YP_006509702.1| methyltransferase [Legionella pneumophila subsp. pneumophila]
 gi|53752270|emb|CAH13702.1| hypothetical protein lpp2549 [Legionella pneumophila str. Paris]
 gi|395131576|emb|CCD09863.1| methyltransferase [Legionella pneumophila subsp. pneumophila]
          Length = 577

 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 82/367 (22%), Positives = 149/367 (40%), Gaps = 29/367 (7%)

Query: 65  EGSSPEIDEYYADVRYE---RIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKAS 121
           EG  P+    Y  +  +       L+ LG+ Y  LG +E            A  Y+ +A 
Sbjct: 18  EGHLPQAISLYEQILAQSPKHTETLHFLGLTYAQLGDMEN-----------AILYFLQAK 66

Query: 122 RIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDS 181
           +I+ ++              G++++A   ++  +E   + V A    A        Y  +
Sbjct: 67  KINPNDVGILNNLANAYKKAGQLDEAIKYYQQAIEIKPEYVQAHNNLAATYALLNNYQKA 126

Query: 182 LEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMD 241
           L  Y  A+   P    A    +GL   K  QL  A+  F   + L+P++ EA   L ++ 
Sbjct: 127 LHHYVIAVNTEPDFSAA-HFNLGLLLLKNQQLSAAKTQFNNVIALNPKHREAQFYLGILH 185

Query: 242 LQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG 301
           L+ N  +   +   K+      +    + L  +A       Q+ L       ALA+ N  
Sbjct: 186 LEDNLLSEAEQAFHKVLEQDHEHVQSLINLGVIA---LKREQNQLAVDYFTKALALDNED 242

Query: 302 PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSA 361
               +   NLA ++     +E A ++Y   +K+     E++   Y  G  Q+ LG    A
Sbjct: 243 IDARN---NLAATFMHHDRFENALMHYDVLLKKEPNNLEYL---YNSGVAQMALGHLNEA 296

Query: 362 LTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLI 421
              F+++L +  D+  +L  L  IY+++   E A+E L +A  I+P D      +   ++
Sbjct: 297 TLLFDQILTLQSDHTPSLNNLAAIYLKMDMRETAREYLERALVINPDDV-----VSRHML 351

Query: 422 SSDTGAA 428
           ++ TGA 
Sbjct: 352 NAITGAT 358


>gi|440752492|ref|ZP_20931695.1| tetratricopeptide repeat family protein [Microcystis aeruginosa
           TAIHU98]
 gi|440176985|gb|ELP56258.1| tetratricopeptide repeat family protein [Microcystis aeruginosa
           TAIHU98]
          Length = 801

 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 83/318 (26%), Positives = 130/318 (40%), Gaps = 22/318 (6%)

Query: 162 VPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQ 221
           +P+L G     +   RY D+L+ + R + + P          G   Y L Q  +A  ++ 
Sbjct: 438 LPSLAGFTLKLYELKRYQDALKGFNRLVSLLPQWEDGW-FYQGTTFYYLEQYQEAIASYD 496

Query: 222 RALQLDPENVEAL--VALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFF 279
           +AL++ P+  EA      A+ DL   E A     +    RA E+ P    A N   N  F
Sbjct: 497 KALEIKPDYHEAWNNRGNALDDLGRFEQA-----IASYDRALEMKPDYHEAWNNRGNALF 551

Query: 280 FTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPH 339
             G+  L E +     A+    P    ++YN   +  + G +E+A   Y  +++     H
Sbjct: 552 NLGR--LAEAIASYDKALE-FKPDYHEAWYNRGNALFNLGRFEEAIASYDRALEFKPDYH 608

Query: 340 EFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELL 399
           +    +Y  G     LG F   + ++++ LEI PD  E     G     LG++E+A    
Sbjct: 609 Q---AWYNRGNALGNLGRFEEEIASYDRALEIKPDKHEAWNNRGVALGNLGRLEEAIASY 665

Query: 400 RKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPI--EVLNNIGVI 457
            +A +  P D +A+ + G  L +      L     A     KA E  P   E   N G  
Sbjct: 666 DRALEFKPDDHEAWYNRGNALFN------LGRLAEAIASYDKALEFKPDYHEAWYNRGNA 719

Query: 458 HFEKGEFESAHQSFKDAL 475
            F  G FE A  S+  AL
Sbjct: 720 LFNLGRFEEAIASYDRAL 737



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 73/304 (24%), Positives = 121/304 (39%), Gaps = 20/304 (6%)

Query: 108 EHFILATQYYNKASRI--DMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPAL 165
           E +  A   Y+KA  I  D HE   W  +G  L   G  EQA +++   LE   D   A 
Sbjct: 486 EQYQEAIASYDKALEIKPDYHE--AWNNRGNALDDLGRFEQAIASYDRALEMKPDYHEAW 543

Query: 166 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 225
             +    FN GR ++++  Y +AL+  P    A     G   + LG+  +A  ++ RAL+
Sbjct: 544 NNRGNALFNLGRLAEAIASYDKALEFKPDYHEAW-YNRGNALFNLGRFEEAIASYDRALE 602

Query: 226 LDPENVEALVALAVMDLQANEAAGIRKGMEKM---QRAFEIYPYCAMALNYLANHFFFTG 282
             P+  +A         + N    + +  E++    RA EI P    A N   N     G
Sbjct: 603 FKPDYHQAWYN------RGNALGNLGRFEEEIASYDRALEIKPDKHEAWN---NRGVALG 653

Query: 283 QHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFI 342
               +E+   +        P    ++YN   +  + G   +A   Y  +++     HE  
Sbjct: 654 NLGRLEEAIASYDRALEFKPDDHEAWYNRGNALFNLGRLAEAIASYDKALEFKPDYHE-- 711

Query: 343 FPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKA 402
             +Y  G     LG F  A+ ++++ LE   +           Y     +E A E L++A
Sbjct: 712 -AWYNRGNALFNLGRFEEAIASYDRALEFNSNYANAYYNKACCYGLQNNVELAIENLQRA 770

Query: 403 AKID 406
             +D
Sbjct: 771 INLD 774



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 92/398 (23%), Positives = 147/398 (36%), Gaps = 43/398 (10%)

Query: 217 RQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLAN 276
           +Q   +  +  PE  E L +LA   L+  E    +  ++   R   + P       Y   
Sbjct: 423 KQLIWQLFKQKPE--EMLPSLAGFTLKLYELKRYQDALKGFNRLVSLLPQWEDGWFYQGT 480

Query: 277 HFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEIN 336
            F++  Q+       + AL +    P    ++ N   +    G +E+A   Y  +++   
Sbjct: 481 TFYYLEQYQEAIASYDKALEIK---PDYHEAWNNRGNALDDLGRFEQAIASYDRALEMKP 537

Query: 337 KPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQ 396
             HE    +   G     LG    A+ +++K LE  PD  E     G+    LG+ E+A 
Sbjct: 538 DYHE---AWNNRGNALFNLGRLAEAIASYDKALEFKPDYHEAWYNRGNALFNLGRFEEAI 594

Query: 397 ELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPI--EVLNNI 454
               +A +  P   QA+ + G  L        L  F+       +A E  P   E  NN 
Sbjct: 595 ASYDRALEFKPDYHQAWYNRGNAL------GNLGRFEEEIASYDRALEIKPDKHEAWNNR 648

Query: 455 GVIHFEKGEFESAHQSFKDAL-----GDGIWLT----LLDSKTKTYVIDASASMLQFKDM 505
           GV     G  E A  S+  AL         W      L +       I +    L+FK  
Sbjct: 649 GVALGNLGRLEEAIASYDRALEFKPDDHEAWYNRGNALFNLGRLAEAIASYDKALEFK-- 706

Query: 506 QLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRL 565
                     ++ E  +N+   LFNL R  E I         Y   L    +Y +AY   
Sbjct: 707 ---------PDYHEAWYNRGNALFNLGRFEEAIAS-------YDRALEFNSNYANAYYNK 750

Query: 566 AAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLE 603
           A     +NN++L+IE +  A+ ++ KY +      D E
Sbjct: 751 ACCYGLQNNVELAIENLQRAINLDVKYQDMAKTDKDFE 788


>gi|32307150|ref|NP_858059.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
           110 kDa subunit isoform 2 [Homo sapiens]
 gi|397498836|ref|XP_003820180.1| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit isoform
           2 [Pan paniscus]
 gi|426396358|ref|XP_004064414.1| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit isoform
           2 [Gorilla gorilla gorilla]
 gi|15680175|gb|AAH14434.1| O-linked N-acetylglucosamine (GlcNAc) transferase
           (UDP-N-acetylglucosamine:polypeptide-N-
           acetylglucosaminyl transferase) [Homo sapiens]
 gi|18250914|emb|CAC86127.1| UDP-N-acatylglucosamine: polypeptide-N-acetylglucosaminyl
           transferase [Homo sapiens]
 gi|119625692|gb|EAX05287.1| O-linked N-acetylglucosamine (GlcNAc) transferase
           (UDP-N-acetylglucosamine:polypeptide-N-
           acetylglucosaminyl transferase), isoform CRA_c [Homo
           sapiens]
 gi|123993895|gb|ABM84549.1| O-linked N-acetylglucosamine (GlcNAc) transferase
           (UDP-N-acetylglucosamine:polypeptide-N-
           acetylglucosaminyl transferase) [synthetic construct]
 gi|124000677|gb|ABM87847.1| O-linked N-acetylglucosamine (GlcNAc) transferase
           (UDP-N-acetylglucosamine:polypeptide-N-
           acetylglucosaminyl transferase) [synthetic construct]
 gi|224487755|dbj|BAH24112.1| O-linked N-acetylglucosamine (GlcNAc) transferase [synthetic
           construct]
 gi|410227762|gb|JAA11100.1| O-linked N-acetylglucosamine (GlcNAc) transferase
           (UDP-N-acetylglucosamine:polypeptide-N-
           acetylglucosaminyl transferase) [Pan troglodytes]
 gi|410257114|gb|JAA16524.1| O-linked N-acetylglucosamine (GlcNAc) transferase
           (UDP-N-acetylglucosamine:polypeptide-N-
           acetylglucosaminyl transferase) [Pan troglodytes]
          Length = 1036

 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 104/479 (21%), Positives = 189/479 (39%), Gaps = 29/479 (6%)

Query: 142 GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 201
           G+ E A      +   + DN   LL  + + F   R   S  F   A++ +P    A   
Sbjct: 25  GDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYS- 83

Query: 202 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 261
            +G    + GQL +A + ++ AL+L P+ ++  + LA   + A +  G    ++    A 
Sbjct: 84  NLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEG---AVQAYVSAL 140

Query: 262 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 319
           +  P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G
Sbjct: 141 QYNPDLYCVRS--DLGNLLKALGR---LEEAKACYLKAIETQPNFAVAWSNLGCVFNAQG 195

Query: 320 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 379
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++    
Sbjct: 196 EIWLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVH 252

Query: 380 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGA-ALDAFKTARTL 438
             L  +Y + G I+ A +  R+A ++ P    A+ +L   L    + A A D + TA  L
Sbjct: 253 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRL 312

Query: 439 LKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASAS 498
                +      LNN+  I  E+G  E A + ++ AL       +       +   AS  
Sbjct: 313 CPTHADS-----LNNLANIKREQGNIEEAVRLYRKAL------EVFPEFAAAHSNLASVL 361

Query: 499 MLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDY 558
             Q K  +    ++     + +         N+   L+++ D   A   Y   +     +
Sbjct: 362 QQQGKLQEALMHYKEA---IRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAF 418

Query: 559 VDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFR 617
            DA+  LA+I K   N+  +I     ALK+   +P+A   L        DW    E  +
Sbjct: 419 ADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMK 477



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 86/386 (22%), Positives = 164/386 (42%), Gaps = 24/386 (6%)

Query: 93  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 152
           Y+ LG +  ++ + +E    A ++Y  A R+       ++     L+A G++E A  A+ 
Sbjct: 82  YSNLGNVYKERGQLQE----AIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 137

Query: 153 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 210
             L+ + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 138 SALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIETQPNFAVAWS-NLGCVFNAQ 194

Query: 211 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 270
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 195 GEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAAYLRALSLSPNHAVV 251

Query: 271 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 330
              LA  ++  G   L       A+ +  H P    +Y NLA +   KG   +A   Y  
Sbjct: 252 HGNLACVYYEQGLIDLAIDTYRRAIELQPHFPD---AYCNLANALKEKGSVAEAEDCYNT 308

Query: 331 SVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLG 390
           +++      + +     L  ++ + G+   A+  + K LE++P+       L  +  Q G
Sbjct: 309 ALRLCPTHADSL---NNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQG 365

Query: 391 QIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGEEVPIE 449
           ++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +          +
Sbjct: 366 KLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA-----D 420

Query: 450 VLNNIGVIHFEKGEFESAHQSFKDAL 475
             +N+  IH + G    A  S++ AL
Sbjct: 421 AHSNLASIHKDSGNIPEAIASYRTAL 446



 Score = 42.4 bits (98), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 76/347 (21%), Positives = 141/347 (40%), Gaps = 57/347 (16%)

Query: 278 FFFTGQHFLVEQLTETA----LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK 333
              +  HF   +L  +A    LA+  + P  + +Y NL   Y  +G  ++A  +Y  +++
Sbjct: 49  LLLSSIHFQCRRLDRSAHFSTLAIKQN-PLLAEAYSNLGNVYKERGQLQEAIEHYRHALR 107

Query: 334 EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIE 393
              KP +FI  Y  L    +  GD   A+  +   L+  PD       LG++   LG++E
Sbjct: 108 L--KP-DFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLE 164

Query: 394 KAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNN 453
           +A+    KA +  P  A A+ +LG                    +    GE         
Sbjct: 165 EAKACYLKAIETQPNFAVAWSNLG-------------------CVFNAQGEIW------- 198

Query: 454 IGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVID-ASASMLQFKDMQLFHRFE 512
           + + HFEK    +   +F DA     ++ L +   +  + D A A+ L+   +       
Sbjct: 199 LAIHHFEKAV--TLDPNFLDA-----YINLGNVLKEARIFDRAVAAYLRALSLS------ 245

Query: 513 NDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKAR 572
              NH  +  N   V +    L++   DT      YR  +     + DAY  LA   K +
Sbjct: 246 --PNHAVVHGNLACVYYEQG-LIDLAIDT------YRRAIELQPHFPDAYCNLANALKEK 296

Query: 573 NNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAA 619
            ++  + +  N AL++   + ++L+ L +++ +  +  +A   +R A
Sbjct: 297 GSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKA 343


>gi|326430815|gb|EGD76385.1| tetratricopeptide protein [Salpingoeca sp. ATCC 50818]
          Length = 809

 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 68/246 (27%), Positives = 108/246 (43%), Gaps = 34/246 (13%)

Query: 262 EIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAV-----TNHGPTKSHSYYNLARSYH 316
           E +P  A   N L   +   G +    +  E ALA+         P+ + +Y NL  +Y+
Sbjct: 348 EKHPSTATTYNGLGTAYGDKGDYDRAIECFEKALAIYVEMLGEKHPSTASTYNNLGSAYY 407

Query: 317 SKGDYEKAGLYY----MASVKEINKPHEFIF-PYYGLGQVQLKLGDFRSALTNFEKVLEI 371
           SKGDY+KA  +Y      +V+ + + H      Y GLG       +   A+  +EK L I
Sbjct: 408 SKGDYDKAIAFYEKDLAITVETLGEKHPGTADSYLGLGVAYYSKSENDEAIQLYEKALAI 467

Query: 372 --------YPDNCETLKALGHIYVQLGQIEKAQELLRKAAKID--------PRDAQAFID 415
                   +P   ET   LG+ Y   G+ +KA +L  KA  I         P  A  + +
Sbjct: 468 KVETLGEKHPSTAETYNNLGNTYYSKGEYDKAIQLYEKALAITVETLGEKHPSTADTYNN 527

Query: 416 LGELLISSDTG---AALDAFKTARTL-LKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQ 469
           LG     SD G    A+  ++ A  + ++  GE+ P      NN+G  + +KG+++ A Q
Sbjct: 528 LGNAY--SDKGEYDKAIVFYEKALAIKVETLGEKHPSTASTHNNLGTAYADKGDYDKAIQ 585

Query: 470 SFKDAL 475
             + AL
Sbjct: 586 HHETAL 591



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 56/193 (29%), Positives = 85/193 (44%), Gaps = 25/193 (12%)

Query: 308 YYNLARSYHSKGDYEKAGLYY----MASVKEINKPHEFIFPYY-GLGQVQLKLGDFRSAL 362
           Y NL  +Y  KG+ +KA  +Y      +V+ + + H      Y GLG      GD+  A+
Sbjct: 315 YNNLGEAYRHKGECDKAVAFYEKDLAITVETLGEKHPSTATTYNGLGTAYGDKGDYDRAI 374

Query: 363 TNFEKVLEIY--------PDNCETLKALGHIYVQLGQIEKAQELLRKAAKID-------- 406
             FEK L IY        P    T   LG  Y   G  +KA     K   I         
Sbjct: 375 ECFEKALAIYVEMLGEKHPSTASTYNNLGSAYYSKGDYDKAIAFYEKDLAITVETLGEKH 434

Query: 407 PRDAQAFIDLGELLIS-SDTGAALDAFKTARTL-LKKAGEEVP--IEVLNNIGVIHFEKG 462
           P  A +++ LG    S S+   A+  ++ A  + ++  GE+ P   E  NN+G  ++ KG
Sbjct: 435 PGTADSYLGLGVAYYSKSENDEAIQLYEKALAIKVETLGEKHPSTAETYNNLGNTYYSKG 494

Query: 463 EFESAHQSFKDAL 475
           E++ A Q ++ AL
Sbjct: 495 EYDKAIQLYEKAL 507



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 90/372 (24%), Positives = 149/372 (40%), Gaps = 74/372 (19%)

Query: 146 QASSAFKIVLEADR-DNVPAL---LGQACVEFNRGRYSDSLEFYKRALQV--------HP 193
           +A+ A ++  E ++ +NV AL   LG+A    ++G    ++ FY++ L +        HP
Sbjct: 294 EAALAIRLRTEGEKGENVAALYNNLGEAYR--HKGECDKAVAFYEKDLAITVETLGEKHP 351

Query: 194 SCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKG 253
           S       G+G      G   +A + F++AL +    VE L                   
Sbjct: 352 STATTYN-GLGTAYGDKGDYDRAIECFEKALAI---YVEML------------------- 388

Query: 254 MEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVT-----NHGPTKSHSY 308
                   E +P  A   N L + ++  G +       E  LA+T        P  + SY
Sbjct: 389 -------GEKHPSTASTYNNLGSAYYSKGDYDKAIAFYEKDLAITVETLGEKHPGTADSY 441

Query: 309 YNLARSYHSKGDYEKA-GLYYMA---SVKEINKPHEFIFPYYG-LGQVQLKLGDFRSALT 363
             L  +Y+SK + ++A  LY  A    V+ + + H      Y  LG      G++  A+ 
Sbjct: 442 LGLGVAYYSKSENDEAIQLYEKALAIKVETLGEKHPSTAETYNNLGNTYYSKGEYDKAIQ 501

Query: 364 NFEKVLEI--------YPDNCETLKALGHIYVQLGQIEKAQELLRKAAKID--------P 407
            +EK L I        +P   +T   LG+ Y   G+ +KA     KA  I         P
Sbjct: 502 LYEKALAITVETLGEKHPSTADTYNNLGNAYSDKGEYDKAIVFYEKALAIKVETLGEKHP 561

Query: 408 RDAQAFIDLGELLIS-SDTGAALDAFKTARTL-LKKAGEEVPIEVLN--NIGVIHFEKGE 463
             A    +LG       D   A+   +TA  + ++  GE+ P    +  NIG++H ++G+
Sbjct: 562 STASTHNNLGTAYADKGDYDKAIQHHETALAIRVETLGEKHPHTATSYFNIGLLHDDRGD 621

Query: 464 FESAHQSFKDAL 475
            E A    + AL
Sbjct: 622 KEQACACMQQAL 633


>gi|149758509|ref|XP_001493422.1| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit isoform
           1 [Equus caballus]
 gi|291407677|ref|XP_002720149.1| PREDICTED: O-linked GlcNAc transferase isoform 2 [Oryctolagus
           cuniculus]
 gi|296235743|ref|XP_002763023.1| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit isoform
           1 [Callithrix jacchus]
 gi|348570518|ref|XP_003471044.1| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit-like
           isoform 2 [Cavia porcellus]
 gi|402910496|ref|XP_003917911.1| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit isoform
           1 [Papio anubis]
 gi|426257214|ref|XP_004022227.1| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit isoform
           2 [Ovis aries]
 gi|378405191|sp|P81436.2|OGT1_RABIT RecName: Full=UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit;
           AltName: Full=O-GlcNAc transferase subunit p110;
           AltName: Full=O-linked N-acetylglucosamine transferase
           110 kDa subunit; Short=OGT
 gi|355757457|gb|EHH60982.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
           110 kDa subunit [Macaca fascicularis]
 gi|380817296|gb|AFE80522.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
           110 kDa subunit isoform 1 [Macaca mulatta]
 gi|383422239|gb|AFH34333.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
           110 kDa subunit isoform 1 [Macaca mulatta]
 gi|384949880|gb|AFI38545.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
           110 kDa subunit isoform 1 [Macaca mulatta]
          Length = 1046

 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 104/479 (21%), Positives = 189/479 (39%), Gaps = 29/479 (6%)

Query: 142 GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 201
           G+ E A      +   + DN   LL  + + F   R   S  F   A++ +P    A   
Sbjct: 35  GDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYS- 93

Query: 202 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 261
            +G    + GQL +A + ++ AL+L P+ ++  + LA   + A +  G    ++    A 
Sbjct: 94  NLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEG---AVQAYVSAL 150

Query: 262 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 319
           +  P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G
Sbjct: 151 QYNPDLYCVRS--DLGNLLKALGR---LEEAKACYLKAIETQPNFAVAWSNLGCVFNAQG 205

Query: 320 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 379
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++    
Sbjct: 206 EIWLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVH 262

Query: 380 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGA-ALDAFKTARTL 438
             L  +Y + G I+ A +  R+A ++ P    A+ +L   L    + A A D + TA  L
Sbjct: 263 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRL 322

Query: 439 LKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASAS 498
                +      LNN+  I  E+G  E A + ++ AL       +       +   AS  
Sbjct: 323 CPTHADS-----LNNLANIKREQGNIEEAVRLYRKAL------EVFPEFAAAHSNLASVL 371

Query: 499 MLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDY 558
             Q K  +    ++     + +         N+   L+++ D   A   Y   +     +
Sbjct: 372 QQQGKLQEALMHYKEA---IRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAF 428

Query: 559 VDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFR 617
            DA+  LA+I K   N+  +I     ALK+   +P+A   L        DW    E  +
Sbjct: 429 ADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMK 487



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 86/386 (22%), Positives = 164/386 (42%), Gaps = 24/386 (6%)

Query: 93  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 152
           Y+ LG +  ++ + +E    A ++Y  A R+       ++     L+A G++E A  A+ 
Sbjct: 92  YSNLGNVYKERGQLQE----AIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 147

Query: 153 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 210
             L+ + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 148 SALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIETQPNFAVAWS-NLGCVFNAQ 204

Query: 211 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 270
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 205 GEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAAYLRALSLSPNHAVV 261

Query: 271 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 330
              LA  ++  G   L       A+ +  H P    +Y NLA +   KG   +A   Y  
Sbjct: 262 HGNLACVYYEQGLIDLAIDTYRRAIELQPHFPD---AYCNLANALKEKGSVAEAEDCYNT 318

Query: 331 SVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLG 390
           +++      + +     L  ++ + G+   A+  + K LE++P+       L  +  Q G
Sbjct: 319 ALRLCPTHADSL---NNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQG 375

Query: 391 QIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGEEVPIE 449
           ++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +          +
Sbjct: 376 KLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA-----D 430

Query: 450 VLNNIGVIHFEKGEFESAHQSFKDAL 475
             +N+  IH + G    A  S++ AL
Sbjct: 431 AHSNLASIHKDSGNIPEAIASYRTAL 456



 Score = 42.0 bits (97), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 76/347 (21%), Positives = 141/347 (40%), Gaps = 57/347 (16%)

Query: 278 FFFTGQHFLVEQLTETA----LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK 333
              +  HF   +L  +A    LA+  + P  + +Y NL   Y  +G  ++A  +Y  +++
Sbjct: 59  LLLSSIHFQCRRLDRSAHFSTLAIKQN-PLLAEAYSNLGNVYKERGQLQEAIEHYRHALR 117

Query: 334 EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIE 393
              KP +FI  Y  L    +  GD   A+  +   L+  PD       LG++   LG++E
Sbjct: 118 L--KP-DFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLE 174

Query: 394 KAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNN 453
           +A+    KA +  P  A A+ +LG                    +    GE         
Sbjct: 175 EAKACYLKAIETQPNFAVAWSNLG-------------------CVFNAQGEIW------- 208

Query: 454 IGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVID-ASASMLQFKDMQLFHRFE 512
           + + HFEK    +   +F DA     ++ L +   +  + D A A+ L+   +       
Sbjct: 209 LAIHHFEKAV--TLDPNFLDA-----YINLGNVLKEARIFDRAVAAYLRALSLS------ 255

Query: 513 NDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKAR 572
              NH  +  N   V +    L++   DT      YR  +     + DAY  LA   K +
Sbjct: 256 --PNHAVVHGNLACVYYEQG-LIDLAIDT------YRRAIELQPHFPDAYCNLANALKEK 306

Query: 573 NNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAA 619
            ++  + +  N AL++   + ++L+ L +++ +  +  +A   +R A
Sbjct: 307 GSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKA 353


>gi|354502726|ref|XP_003513433.1| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit
           [Cricetulus griseus]
          Length = 1046

 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 87/391 (22%), Positives = 166/391 (42%), Gaps = 34/391 (8%)

Query: 93  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 152
           Y+ LG +  ++ + +E    A ++Y  A R+       ++     L+A G++E A  A+ 
Sbjct: 92  YSNLGNVYKERGQLQE----AIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 147

Query: 153 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 210
             L+ + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 148 SALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIETQPNFAVAWS-NLGCVFNAQ 204

Query: 211 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 270
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 205 GEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAAYLRALSLSPNHAVV 261

Query: 271 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 330
              LA  ++  G   L       A+ +  H P    +Y NLA +   KG   +A   Y  
Sbjct: 262 HGNLACVYYEQGLIDLAIDTYRRAIELQPHFPD---AYCNLANALKEKGSVAEAEDCYNT 318

Query: 331 SVKEINKPHEFIFPYYG-----LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 385
           +++        + P +      L  ++ + G+   A+  + K LE++P+       L  +
Sbjct: 319 ALR--------LCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASV 370

Query: 386 YVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGE 444
             Q G++++A    ++A +I P+ A A+ ++G  L    D   AL  +  A  +      
Sbjct: 371 LQQQGKLQEALMHYKEAIRISPKFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA- 429

Query: 445 EVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
               +  +N+  IH + G    A  S++ AL
Sbjct: 430 ----DAHSNLASIHKDSGNIPEAIASYRTAL 456



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 104/479 (21%), Positives = 189/479 (39%), Gaps = 29/479 (6%)

Query: 142 GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 201
           G+ E A      +   + DN   LL  + + F   R   S  F   A++ +P    A   
Sbjct: 35  GDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYS- 93

Query: 202 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 261
            +G    + GQL +A + ++ AL+L P+ ++  + LA   + A +  G    ++    A 
Sbjct: 94  NLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEG---AVQAYVSAL 150

Query: 262 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 319
           +  P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G
Sbjct: 151 QYNPDLYCVRS--DLGNLLKALGR---LEEAKACYLKAIETQPNFAVAWSNLGCVFNAQG 205

Query: 320 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 379
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++    
Sbjct: 206 EIWLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVH 262

Query: 380 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGA-ALDAFKTARTL 438
             L  +Y + G I+ A +  R+A ++ P    A+ +L   L    + A A D + TA  L
Sbjct: 263 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRL 322

Query: 439 LKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASAS 498
                +      LNN+  I  E+G  E A + ++ AL       +       +   AS  
Sbjct: 323 CPTHADS-----LNNLANIKREQGNIEEAVRLYRKAL------EVFPEFAAAHSNLASVL 371

Query: 499 MLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDY 558
             Q K  +    ++     + +         N+   L+++ D   A   Y   +     +
Sbjct: 372 QQQGKLQEALMHYKEA---IRISPKFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAF 428

Query: 559 VDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFR 617
            DA+  LA+I K   N+  +I     ALK+   +P+A   L        DW    E  +
Sbjct: 429 ADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMK 487



 Score = 42.0 bits (97), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 76/347 (21%), Positives = 140/347 (40%), Gaps = 57/347 (16%)

Query: 278 FFFTGQHFLVEQLTETA----LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK 333
              +  HF   +L  +A    LA+    P  + +Y NL   Y  +G  ++A  +Y  +++
Sbjct: 59  LLLSSIHFQCRRLDRSAHFSTLAI-KQNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALR 117

Query: 334 EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIE 393
              KP +FI  Y  L    +  GD   A+  +   L+  PD       LG++   LG++E
Sbjct: 118 L--KP-DFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLE 174

Query: 394 KAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNN 453
           +A+    KA +  P  A A+ +LG                    +    GE         
Sbjct: 175 EAKACYLKAIETQPNFAVAWSNLG-------------------CVFNAQGEIW------- 208

Query: 454 IGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVID-ASASMLQFKDMQLFHRFE 512
           + + HFEK    +   +F DA     ++ L +   +  + D A A+ L+   +       
Sbjct: 209 LAIHHFEKAV--TLDPNFLDA-----YINLGNVLKEARIFDRAVAAYLRALSLS------ 255

Query: 513 NDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKAR 572
              NH  +  N   V +    L++   DT      YR  +     + DAY  LA   K +
Sbjct: 256 --PNHAVVHGNLACVYYEQG-LIDLAIDT------YRRAIELQPHFPDAYCNLANALKEK 306

Query: 573 NNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAA 619
            ++  + +  N AL++   + ++L+ L +++ +  +  +A   +R A
Sbjct: 307 GSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKA 353


>gi|149758511|ref|XP_001493438.1| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit isoform
           2 [Equus caballus]
 gi|291407675|ref|XP_002720148.1| PREDICTED: O-linked GlcNAc transferase isoform 1 [Oryctolagus
           cuniculus]
 gi|296235745|ref|XP_002763024.1| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit isoform
           2 [Callithrix jacchus]
 gi|348570516|ref|XP_003471043.1| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit-like
           isoform 1 [Cavia porcellus]
 gi|402910498|ref|XP_003917912.1| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit isoform
           2 [Papio anubis]
 gi|426257212|ref|XP_004022226.1| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit isoform
           1 [Ovis aries]
 gi|380817298|gb|AFE80523.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
           110 kDa subunit isoform 2 [Macaca mulatta]
 gi|383422241|gb|AFH34334.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
           110 kDa subunit isoform 2 [Macaca mulatta]
          Length = 1036

 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 104/479 (21%), Positives = 189/479 (39%), Gaps = 29/479 (6%)

Query: 142 GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 201
           G+ E A      +   + DN   LL  + + F   R   S  F   A++ +P    A   
Sbjct: 25  GDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYS- 83

Query: 202 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 261
            +G    + GQL +A + ++ AL+L P+ ++  + LA   + A +  G    ++    A 
Sbjct: 84  NLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEG---AVQAYVSAL 140

Query: 262 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 319
           +  P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G
Sbjct: 141 QYNPDLYCVRS--DLGNLLKALGR---LEEAKACYLKAIETQPNFAVAWSNLGCVFNAQG 195

Query: 320 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 379
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++    
Sbjct: 196 EIWLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVH 252

Query: 380 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGA-ALDAFKTARTL 438
             L  +Y + G I+ A +  R+A ++ P    A+ +L   L    + A A D + TA  L
Sbjct: 253 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRL 312

Query: 439 LKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASAS 498
                +      LNN+  I  E+G  E A + ++ AL       +       +   AS  
Sbjct: 313 CPTHADS-----LNNLANIKREQGNIEEAVRLYRKAL------EVFPEFAAAHSNLASVL 361

Query: 499 MLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDY 558
             Q K  +    ++     + +         N+   L+++ D   A   Y   +     +
Sbjct: 362 QQQGKLQEALMHYKEA---IRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAF 418

Query: 559 VDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFR 617
            DA+  LA+I K   N+  +I     ALK+   +P+A   L        DW    E  +
Sbjct: 419 ADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMK 477



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 86/386 (22%), Positives = 164/386 (42%), Gaps = 24/386 (6%)

Query: 93  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 152
           Y+ LG +  ++ + +E    A ++Y  A R+       ++     L+A G++E A  A+ 
Sbjct: 82  YSNLGNVYKERGQLQE----AIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 137

Query: 153 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 210
             L+ + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 138 SALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIETQPNFAVAWS-NLGCVFNAQ 194

Query: 211 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 270
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 195 GEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAAYLRALSLSPNHAVV 251

Query: 271 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 330
              LA  ++  G   L       A+ +  H P    +Y NLA +   KG   +A   Y  
Sbjct: 252 HGNLACVYYEQGLIDLAIDTYRRAIELQPHFPD---AYCNLANALKEKGSVAEAEDCYNT 308

Query: 331 SVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLG 390
           +++      + +     L  ++ + G+   A+  + K LE++P+       L  +  Q G
Sbjct: 309 ALRLCPTHADSL---NNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQG 365

Query: 391 QIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGEEVPIE 449
           ++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +          +
Sbjct: 366 KLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA-----D 420

Query: 450 VLNNIGVIHFEKGEFESAHQSFKDAL 475
             +N+  IH + G    A  S++ AL
Sbjct: 421 AHSNLASIHKDSGNIPEAIASYRTAL 446



 Score = 42.0 bits (97), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 76/347 (21%), Positives = 141/347 (40%), Gaps = 57/347 (16%)

Query: 278 FFFTGQHFLVEQLTETA----LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK 333
              +  HF   +L  +A    LA+  + P  + +Y NL   Y  +G  ++A  +Y  +++
Sbjct: 49  LLLSSIHFQCRRLDRSAHFSTLAIKQN-PLLAEAYSNLGNVYKERGQLQEAIEHYRHALR 107

Query: 334 EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIE 393
              KP +FI  Y  L    +  GD   A+  +   L+  PD       LG++   LG++E
Sbjct: 108 L--KP-DFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLE 164

Query: 394 KAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNN 453
           +A+    KA +  P  A A+ +LG                    +    GE         
Sbjct: 165 EAKACYLKAIETQPNFAVAWSNLG-------------------CVFNAQGEIW------- 198

Query: 454 IGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVID-ASASMLQFKDMQLFHRFE 512
           + + HFEK    +   +F DA     ++ L +   +  + D A A+ L+   +       
Sbjct: 199 LAIHHFEKAV--TLDPNFLDA-----YINLGNVLKEARIFDRAVAAYLRALSLS------ 245

Query: 513 NDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKAR 572
              NH  +  N   V +    L++   DT      YR  +     + DAY  LA   K +
Sbjct: 246 --PNHAVVHGNLACVYYEQG-LIDLAIDT------YRRAIELQPHFPDAYCNLANALKEK 296

Query: 573 NNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAA 619
            ++  + +  N AL++   + ++L+ L +++ +  +  +A   +R A
Sbjct: 297 GSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKA 343


>gi|432118087|gb|ELK37988.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
           110 kDa subunit [Myotis davidii]
          Length = 1046

 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 104/479 (21%), Positives = 189/479 (39%), Gaps = 29/479 (6%)

Query: 142 GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 201
           G+ E A      +   + DN   LL  + + F   R   S  F   A++ +P    A   
Sbjct: 35  GDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYS- 93

Query: 202 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 261
            +G    + GQL +A + ++ AL+L P+ ++  + LA   + A +  G    ++    A 
Sbjct: 94  NLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEG---AVQAYVSAL 150

Query: 262 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 319
           +  P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G
Sbjct: 151 QYNPDLYCVRS--DLGNLLKALGR---LEEAKACYLKAIETQPNFAVAWSNLGCVFNAQG 205

Query: 320 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 379
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++    
Sbjct: 206 EIWLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVH 262

Query: 380 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGA-ALDAFKTARTL 438
             L  +Y + G I+ A +  R+A ++ P    A+ +L   L    + A A D + TA  L
Sbjct: 263 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRL 322

Query: 439 LKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASAS 498
                +      LNN+  I  E+G  E A + ++ AL       +       +   AS  
Sbjct: 323 CPTHADS-----LNNLANIKREQGNIEEAVRLYRKAL------EVFPEFAAAHSNLASVL 371

Query: 499 MLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDY 558
             Q K  +    ++     + +         N+   L+++ D   A   Y   +     +
Sbjct: 372 QQQGKLQEALMHYKEA---IRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAF 428

Query: 559 VDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFR 617
            DA+  LA+I K   N+  +I     ALK+   +P+A   L        DW    E  +
Sbjct: 429 ADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMK 487



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 86/386 (22%), Positives = 164/386 (42%), Gaps = 24/386 (6%)

Query: 93  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 152
           Y+ LG +  ++ + +E    A ++Y  A R+       ++     L+A G++E A  A+ 
Sbjct: 92  YSNLGNVYKERGQLQE----AIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 147

Query: 153 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 210
             L+ + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 148 SALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIETQPNFAVAWS-NLGCVFNAQ 204

Query: 211 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 270
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 205 GEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAAYLRALSLSPNHAVV 261

Query: 271 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 330
              LA  ++  G   L       A+ +  H P    +Y NLA +   KG   +A   Y  
Sbjct: 262 HGNLACVYYEQGLIDLAIDTYRRAIELQPHFPD---AYCNLANALKEKGSVAEAEDCYNT 318

Query: 331 SVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLG 390
           +++      + +     L  ++ + G+   A+  + K LE++P+       L  +  Q G
Sbjct: 319 ALRLCPTHADSL---NNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQG 375

Query: 391 QIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGEEVPIE 449
           ++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +          +
Sbjct: 376 KLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA-----D 430

Query: 450 VLNNIGVIHFEKGEFESAHQSFKDAL 475
             +N+  IH + G    A  S++ AL
Sbjct: 431 AHSNLASIHKDSGNIPEAIASYRTAL 456



 Score = 42.0 bits (97), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 76/347 (21%), Positives = 140/347 (40%), Gaps = 57/347 (16%)

Query: 278 FFFTGQHFLVEQLTETA----LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK 333
              +  HF   +L  +A    LA+    P  + +Y NL   Y  +G  ++A  +Y  +++
Sbjct: 59  LLLSSIHFQCRRLDRSAHFSTLAI-KQNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALR 117

Query: 334 EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIE 393
              KP +FI  Y  L    +  GD   A+  +   L+  PD       LG++   LG++E
Sbjct: 118 L--KP-DFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLE 174

Query: 394 KAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNN 453
           +A+    KA +  P  A A+ +LG                    +    GE         
Sbjct: 175 EAKACYLKAIETQPNFAVAWSNLG-------------------CVFNAQGEIW------- 208

Query: 454 IGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVID-ASASMLQFKDMQLFHRFE 512
           + + HFEK    +   +F DA     ++ L +   +  + D A A+ L+   +       
Sbjct: 209 LAIHHFEKAV--TLDPNFLDA-----YINLGNVLKEARIFDRAVAAYLRALSLS------ 255

Query: 513 NDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKAR 572
              NH  +  N   V +    L++   DT      YR  +     + DAY  LA   K +
Sbjct: 256 --PNHAVVHGNLACVYYEQG-LIDLAIDT------YRRAIELQPHFPDAYCNLANALKEK 306

Query: 573 NNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAA 619
            ++  + +  N AL++   + ++L+ L +++ +  +  +A   +R A
Sbjct: 307 GSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKA 353


>gi|395858891|ref|XP_003801788.1| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit isoform
           2 [Otolemur garnettii]
          Length = 1036

 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 104/479 (21%), Positives = 189/479 (39%), Gaps = 29/479 (6%)

Query: 142 GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 201
           G+ E A      +   + DN   LL  + + F   R   S  F   A++ +P    A   
Sbjct: 25  GDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYS- 83

Query: 202 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 261
            +G    + GQL +A + ++ AL+L P+ ++  + LA   + A +  G    ++    A 
Sbjct: 84  NLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEG---AVQAYVSAL 140

Query: 262 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 319
           +  P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G
Sbjct: 141 QYNPDLYCVRS--DLGNLLKALGR---LEEAKACYLKAIETQPNFAVAWSNLGCVFNAQG 195

Query: 320 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 379
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++    
Sbjct: 196 EIWLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVH 252

Query: 380 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGA-ALDAFKTARTL 438
             L  +Y + G I+ A +  R+A ++ P    A+ +L   L    + A A D + TA  L
Sbjct: 253 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRL 312

Query: 439 LKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASAS 498
                +      LNN+  I  E+G  E A + ++ AL       +       +   AS  
Sbjct: 313 CPTHADS-----LNNLANIKREQGNIEEAVRLYRKAL------EVFPEFAAAHSNLASVL 361

Query: 499 MLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDY 558
             Q K  +    ++     + +         N+   L+++ D   A   Y   +     +
Sbjct: 362 QQQGKLQEALMHYKEA---IRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAF 418

Query: 559 VDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFR 617
            DA+  LA+I K   N+  +I     ALK+   +P+A   L        DW    E  +
Sbjct: 419 ADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMK 477



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 86/386 (22%), Positives = 164/386 (42%), Gaps = 24/386 (6%)

Query: 93  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 152
           Y+ LG +  ++ + +E    A ++Y  A R+       ++     L+A G++E A  A+ 
Sbjct: 82  YSNLGNVYKERGQLQE----AIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 137

Query: 153 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 210
             L+ + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 138 SALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIETQPNFAVAWS-NLGCVFNAQ 194

Query: 211 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 270
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 195 GEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAAYLRALSLSPNHAVV 251

Query: 271 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 330
              LA  ++  G   L       A+ +  H P    +Y NLA +   KG   +A   Y  
Sbjct: 252 HGNLACVYYEQGLIDLAIDTYRRAIELQPHFPD---AYCNLANALKEKGSVAEAEDCYNT 308

Query: 331 SVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLG 390
           +++      + +     L  ++ + G+   A+  + K LE++P+       L  +  Q G
Sbjct: 309 ALRLCPTHADSL---NNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQG 365

Query: 391 QIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGEEVPIE 449
           ++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +          +
Sbjct: 366 KLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA-----D 420

Query: 450 VLNNIGVIHFEKGEFESAHQSFKDAL 475
             +N+  IH + G    A  S++ AL
Sbjct: 421 AHSNLASIHKDSGNIPEAIASYRTAL 446



 Score = 42.0 bits (97), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 76/347 (21%), Positives = 141/347 (40%), Gaps = 57/347 (16%)

Query: 278 FFFTGQHFLVEQLTETA----LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK 333
              +  HF   +L  +A    LA+  + P  + +Y NL   Y  +G  ++A  +Y  +++
Sbjct: 49  LLLSSIHFQCRRLDRSAHFSTLAIKQN-PLLAEAYSNLGNVYKERGQLQEAIEHYRHALR 107

Query: 334 EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIE 393
              KP +FI  Y  L    +  GD   A+  +   L+  PD       LG++   LG++E
Sbjct: 108 L--KP-DFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLE 164

Query: 394 KAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNN 453
           +A+    KA +  P  A A+ +LG                    +    GE         
Sbjct: 165 EAKACYLKAIETQPNFAVAWSNLG-------------------CVFNAQGEIW------- 198

Query: 454 IGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVID-ASASMLQFKDMQLFHRFE 512
           + + HFEK    +   +F DA     ++ L +   +  + D A A+ L+   +       
Sbjct: 199 LAIHHFEKAV--TLDPNFLDA-----YINLGNVLKEARIFDRAVAAYLRALSLS------ 245

Query: 513 NDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKAR 572
              NH  +  N   V +    L++   DT      YR  +     + DAY  LA   K +
Sbjct: 246 --PNHAVVHGNLACVYYEQG-LIDLAIDT------YRRAIELQPHFPDAYCNLANALKEK 296

Query: 573 NNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAA 619
            ++  + +  N AL++   + ++L+ L +++ +  +  +A   +R A
Sbjct: 297 GSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKA 343


>gi|149042178|gb|EDL95885.1| O-linked N-acetylglucosamine (GlcNAc) transferase
           (UDP-N-acetylglucosamine:polypeptide-N-
           acetylglucosaminyl transferase), isoform CRA_a [Rattus
           norvegicus]
 gi|149042179|gb|EDL95886.1| O-linked N-acetylglucosamine (GlcNAc) transferase
           (UDP-N-acetylglucosamine:polypeptide-N-
           acetylglucosaminyl transferase), isoform CRA_a [Rattus
           norvegicus]
          Length = 1046

 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 104/479 (21%), Positives = 189/479 (39%), Gaps = 29/479 (6%)

Query: 142 GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 201
           G+ E A      +   + DN   LL  + + F   R   S  F   A++ +P    A   
Sbjct: 35  GDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYS- 93

Query: 202 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 261
            +G    + GQL +A + ++ AL+L P+ ++  + LA   + A +  G    ++    A 
Sbjct: 94  NLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEG---AVQAYVSAL 150

Query: 262 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 319
           +  P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G
Sbjct: 151 QYNPDLYCVRS--DLGNLLKALGR---LEEAKACYLKAIETQPNFAVAWSNLGCVFNAQG 205

Query: 320 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 379
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++    
Sbjct: 206 EIWLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVH 262

Query: 380 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGA-ALDAFKTARTL 438
             L  +Y + G I+ A +  R+A ++ P    A+ +L   L    + A A D + TA  L
Sbjct: 263 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRL 322

Query: 439 LKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASAS 498
                +      LNN+  I  E+G  E A + ++ AL       +       +   AS  
Sbjct: 323 CPTHADS-----LNNLANIKREQGNIEEAVRLYRKAL------EVFPEFAAAHSNLASVL 371

Query: 499 MLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDY 558
             Q K  +    ++     + +         N+   L+++ D   A   Y   +     +
Sbjct: 372 QQQGKLQEALMHYKEA---IRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAF 428

Query: 559 VDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFR 617
            DA+  LA+I K   N+  +I     ALK+   +P+A   L        DW    E  +
Sbjct: 429 ADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMK 487



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 87/391 (22%), Positives = 165/391 (42%), Gaps = 34/391 (8%)

Query: 93  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 152
           Y+ LG +  ++ + +E    A ++Y  A R+       ++     L+A G++E A  A+ 
Sbjct: 92  YSNLGNVYKERGQLQE----AIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 147

Query: 153 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 210
             L+ + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 148 SALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIETQPNFAVAWS-NLGCVFNAQ 204

Query: 211 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 270
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 205 GEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAAYLRALSLSPNHAVV 261

Query: 271 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 330
              LA  ++  G   L       A+ +  H P    +Y NLA +   KG   +A   Y  
Sbjct: 262 HGNLACVYYEQGLIDLAIDTYRRAIELQPHFPD---AYCNLANALKEKGSVAEAEDCYNT 318

Query: 331 SVKEINKPHEFIFPYYG-----LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 385
           +++        + P +      L  ++ + G+   A+  + K LE++P+       L  +
Sbjct: 319 ALR--------LCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASV 370

Query: 386 YVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGE 444
             Q G++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +      
Sbjct: 371 LQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA- 429

Query: 445 EVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
               +  +N+  IH + G    A  S++ AL
Sbjct: 430 ----DAHSNLASIHKDSGNIPEAIASYRTAL 456



 Score = 42.0 bits (97), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 76/347 (21%), Positives = 140/347 (40%), Gaps = 57/347 (16%)

Query: 278 FFFTGQHFLVEQLTETA----LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK 333
              +  HF   +L  +A    LA+    P  + +Y NL   Y  +G  ++A  +Y  +++
Sbjct: 59  LLLSSIHFQCRRLDRSAHFSTLAI-KQNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALR 117

Query: 334 EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIE 393
              KP +FI  Y  L    +  GD   A+  +   L+  PD       LG++   LG++E
Sbjct: 118 L--KP-DFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLE 174

Query: 394 KAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNN 453
           +A+    KA +  P  A A+ +LG                    +    GE         
Sbjct: 175 EAKACYLKAIETQPNFAVAWSNLG-------------------CVFNAQGEIW------- 208

Query: 454 IGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVID-ASASMLQFKDMQLFHRFE 512
           + + HFEK    +   +F DA     ++ L +   +  + D A A+ L+   +       
Sbjct: 209 LAIHHFEKAV--TLDPNFLDA-----YINLGNVLKEARIFDRAVAAYLRALSLS------ 255

Query: 513 NDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKAR 572
              NH  +  N   V +    L++   DT      YR  +     + DAY  LA   K +
Sbjct: 256 --PNHAVVHGNLACVYYEQG-LIDLAIDT------YRRAIELQPHFPDAYCNLANALKEK 306

Query: 573 NNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAA 619
            ++  + +  N AL++   + ++L+ L +++ +  +  +A   +R A
Sbjct: 307 GSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKA 353


>gi|156401113|ref|XP_001639136.1| predicted protein [Nematostella vectensis]
 gi|156226262|gb|EDO47073.1| predicted protein [Nematostella vectensis]
          Length = 993

 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 80/348 (22%), Positives = 150/348 (43%), Gaps = 20/348 (5%)

Query: 131 WVGKGQLLLAKGEVEQASSAFKIVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRA 188
           ++     L+A G++E A  A+   L+ + D   V + LG        GR  ++   Y +A
Sbjct: 122 YINLAAALVAAGDLEGAVHAYATALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKA 179

Query: 189 LQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAA 248
           ++  PS   A    +G      G++  A   F++A+QLDP  ++A + L  +     EA 
Sbjct: 180 IETQPSFAVAWS-NLGCVFNAQGEIWLAIHHFEKAVQLDPNFLDAYINLGNV---LKEAR 235

Query: 249 GIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSY 308
              + +    RA  + P  A+    LA  ++  G   L++   +T        P    +Y
Sbjct: 236 IFDRAVAAYLRALNLSPNHAVVHGNLACVYYEQG---LIDLAVDTYRRAIELQPNFPDAY 292

Query: 309 YNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKV 368
            NLA +   +G   +A   Y  ++ +++  H        L  ++ + G    ++  + K 
Sbjct: 293 CNLANALKEQGKVSEAEECYNTAL-QLSPTHADSL--NNLANIKREQGKIEESIRLYCKA 349

Query: 369 LEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGA 427
           LEI+P+       L  +  Q G++++A    ++A +I P  A AF ++G LL    D   
Sbjct: 350 LEIFPEFAAAHSNLASVLQQQGKLQEALLHYKEAIRIHPTFADAFSNMGNLLKEMQDIQG 409

Query: 428 ALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
           A+  +  A  +          +  +N+  +H + G    A QS++ AL
Sbjct: 410 AIQCYSRAIQI-----NPAFADAHSNLASVHKDSGNIPEAIQSYRTAL 452



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 91/400 (22%), Positives = 162/400 (40%), Gaps = 32/400 (8%)

Query: 208 YKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYC 267
           Y+ G   +A Q   +  + +P+N   L+ L+ +  Q      + +       A +  P  
Sbjct: 28  YQSGNYDRAEQICMQLWRREPDNTGVLLLLSSIHFQCRR---LDRSAHFSTLAIKQNPML 84

Query: 268 AMALNYLANHFFFTGQHFLVEQLTETALAVTNHG----PTKSHSYYNLARSYHSKGDYEK 323
           A A + L N F   GQ        + ALA   H     P     Y NLA +  + GD E 
Sbjct: 85  AEAYSNLGNVFKERGQ-------LKDALANYRHAVKLKPDFIDGYINLAAALVAAGDLEG 137

Query: 324 AGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALG 383
           A ++  A+  + N   +       LG +   LG    A   + K +E  P        LG
Sbjct: 138 A-VHAYATALQYNP--DLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPSFAVAWSNLG 194

Query: 384 HIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDT-GAALDAFKTARTLLKKA 442
            ++   G+I  A     KA ++DP    A+I+LG +L  +     A+ A+  A  L    
Sbjct: 195 CVFNAQGEIWLAIHHFEKAVQLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALNLSPNH 254

Query: 443 GEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQF 502
                  V  N+  +++E+G  + A  +++ A+       L  +    Y   A+A   Q 
Sbjct: 255 AV-----VHGNLACVYYEQGLIDLAVDTYRRAI------ELQPNFPDAYCNLANALKEQG 303

Query: 503 KDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAY 562
           K   +    E     ++L       L NLA +  +      +  LY   L  + ++  A+
Sbjct: 304 K---VSEAEECYNTALQLSPTHADSLNNLANIKREQGKIEESIRLYCKALEIFPEFAAAH 360

Query: 563 LRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDL 602
             LA++ + +  LQ ++    EA++++  + +A S +G+L
Sbjct: 361 SNLASVLQQQGKLQEALLHYKEAIRIHPTFADAFSNMGNL 400



 Score = 44.7 bits (104), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 102/473 (21%), Positives = 183/473 (38%), Gaps = 82/473 (17%)

Query: 278 FFFTGQHFLVEQLTETA----LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK 333
              +  HF   +L  +A    LA+    P  + +Y NL   +  +G  + A   Y  +VK
Sbjct: 55  LLLSSIHFQCRRLDRSAHFSTLAI-KQNPMLAEAYSNLGNVFKERGQLKDALANYRHAVK 113

Query: 334 EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIE 393
              KP +FI  Y  L    +  GD   A+  +   L+  PD       LG++   LG++E
Sbjct: 114 L--KP-DFIDGYINLAAALVAAGDLEGAVHAYATALQYNPDLYCVRSDLGNLLKALGRLE 170

Query: 394 KAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNN 453
           +A+    KA +  P  A A+ +LG                                V N 
Sbjct: 171 EAKACYLKAIETQPSFAVAWSNLGC-------------------------------VFNA 199

Query: 454 IGVIHFEKGEFESAHQ---SFKDALGDGIWLTLLDSKTKTYVID-ASASMLQFKDMQLFH 509
            G I      FE A Q   +F DA     ++ L +   +  + D A A+ L+  ++    
Sbjct: 200 QGEIWLAIHHFEKAVQLDPNFLDA-----YINLGNVLKEARIFDRAVAAYLRALNLS--- 251

Query: 510 RFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIA 569
                 NH  +  N   V +    L++   DT      YR  +    ++ DAY  LA   
Sbjct: 252 -----PNHAVVHGNLACVYYEQG-LIDLAVDT------YRRAIELQPNFPDAYCNLANAL 299

Query: 570 KARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSY 629
           K +  +  + E  N AL+++  + ++L+ L +++ +     K +E+ R    A +    +
Sbjct: 300 KEQGKVSEAEECYNTALQLSPTHADSLNNLANIKREQG---KIEESIRLYCKALE---IF 353

Query: 630 ATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKG 689
              +  + N  + L+ + +        L++A   Y   I  H +   A +  G +L E  
Sbjct: 354 PEFAAAHSNLASVLQQQGK--------LQEALLHYKEAIRIHPTFADAFSNMGNLLKEMQ 405

Query: 690 QFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLR 742
               +   +++  +     +     D   NLA V+   GN   A++ Y+  L+
Sbjct: 406 DIQGAIQCYSRAIQ-----INPAFADAHSNLASVHKDSGNIPEAIQSYRTALK 453


>gi|40063716|gb|AAR38497.1| TPR repeat protein [uncultured marine bacterium 583]
          Length = 733

 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 65/250 (26%), Positives = 118/250 (47%), Gaps = 14/250 (5%)

Query: 173 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 232
           ++ G+  ++L+     ++ +P+ P    L  G+C   +G+L +A ++F++AL + P+  E
Sbjct: 18  YSSGQIQEALDSVGALIKEYPNDPLLYNLS-GICYKTIGELDEAVKSFEKALAIKPDYAE 76

Query: 233 AL--VALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQL 290
               + L + DL   +AA     ++  ++A  I P  A A N L       GQ     + 
Sbjct: 77  VHYNLGLTLQDLGQLDAA-----VKSYEKAIAIKPDYANACNNLGVTLQDLGQLDAAVKS 131

Query: 291 TETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQ 350
            E A+A+    P  S +  NL  +  + G  + A   Y  ++    KP ++   +Y LG 
Sbjct: 132 YEKAIAIK---PDFSDANNNLGIALKNLGQLDAAVECYKKALAI--KP-DYAEAHYNLGN 185

Query: 351 VQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDA 410
               LG   +A+  ++K L I PD  +    LG+    LGQ++ A +   KA  I P  A
Sbjct: 186 ALKNLGQLDAAVECYKKALAIKPDYADACNNLGNALKNLGQLDAAVKCYEKAVAIKPDYA 245

Query: 411 QAFIDLGELL 420
           +A+ + G ++
Sbjct: 246 EAYHNNGSVM 255



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 74/304 (24%), Positives = 130/304 (42%), Gaps = 29/304 (9%)

Query: 125 MHEPSTWVGKGQLLLAKGEVEQA-SSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLE 183
           +  P T +     L + G++++A  S   ++ E   D +   L   C +   G   ++++
Sbjct: 4   VSPPQTEINSLIALYSSGQIQEALDSVGALIKEYPNDPLLYNLSGICYK-TIGELDEAVK 62

Query: 184 FYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVM--D 241
            +++AL + P     +   +GL    LGQL  A +++++A+ + P+   A   L V   D
Sbjct: 63  SFEKALAIKPDY-AEVHYNLGLTLQDLGQLDAAVKSYEKAIAIKPDYANACNNLGVTLQD 121

Query: 242 LQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG 301
           L   +AA     ++  ++A  I P  + A N L       GQ     +  + ALA+    
Sbjct: 122 LGQLDAA-----VKSYEKAIAIKPDFSDANNNLGIALKNLGQLDAAVECYKKALAIK--- 173

Query: 302 PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYG-----LGQVQLKLG 356
           P  + ++YNL  +  + G  + A   Y  ++         I P Y      LG     LG
Sbjct: 174 PDYAEAHYNLGNALKNLGQLDAAVECYKKALA--------IKPDYADACNNLGNALKNLG 225

Query: 357 DFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDL 416
              +A+  +EK + I PD  E     G +  +L + ++A      A  I P     FI L
Sbjct: 226 QLDAAVKCYEKAVAIKPDYAEAYHNNGSVMRRLKRQDEALASYESAIAIKPN--LDFI-L 282

Query: 417 GELL 420
           G+LL
Sbjct: 283 GDLL 286


>gi|147899141|ref|NP_001091539.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
           110 kDa subunit [Bos taurus]
 gi|146186901|gb|AAI40543.1| OGT protein [Bos taurus]
 gi|296470806|tpg|DAA12921.1| TPA: O-linked N-acetylglucosamine (GlcNAc) transferase
           (UDP-N-acetylglucosamine:polypeptide-N-
           acetylglucosaminyl transferase) [Bos taurus]
          Length = 1036

 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 104/479 (21%), Positives = 189/479 (39%), Gaps = 29/479 (6%)

Query: 142 GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 201
           G+ E A      +   + DN   LL  + + F   R   S  F   A++ +P    A   
Sbjct: 25  GDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYS- 83

Query: 202 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 261
            +G    + GQL +A + ++ AL+L P+ ++  + LA   + A +  G    ++    A 
Sbjct: 84  NLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEG---AVQAYVSAL 140

Query: 262 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 319
           +  P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G
Sbjct: 141 QYNPDLYCVRS--DLGNLLKALGR---LEEAKACYLKAIETQPNFAVAWSNLGCVFNAQG 195

Query: 320 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 379
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++    
Sbjct: 196 EIWLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVH 252

Query: 380 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGA-ALDAFKTARTL 438
             L  +Y + G I+ A +  R+A ++ P    A+ +L   L    + A A D + TA  L
Sbjct: 253 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRL 312

Query: 439 LKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASAS 498
                +      LNN+  I  E+G  E A + ++ AL       +       +   AS  
Sbjct: 313 CPTHADS-----LNNLANIKREQGNIEEAVRLYRKAL------EVFPEFAAAHSNLASVL 361

Query: 499 MLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDY 558
             Q K  +    ++     + +         N+   L+++ D   A   Y   +     +
Sbjct: 362 QQQGKLQEALMHYKEA---IRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAF 418

Query: 559 VDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFR 617
            DA+  LA+I K   N+  +I     ALK+   +P+A   L        DW    E  +
Sbjct: 419 ADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMK 477



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 86/386 (22%), Positives = 164/386 (42%), Gaps = 24/386 (6%)

Query: 93  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 152
           Y+ LG +  ++ + +E    A ++Y  A R+       ++     L+A G++E A  A+ 
Sbjct: 82  YSNLGNVYKERGQLQE----AIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 137

Query: 153 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 210
             L+ + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 138 SALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIETQPNFAVAWS-NLGCVFNAQ 194

Query: 211 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 270
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 195 GEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAAYLRALSLSPNHAVV 251

Query: 271 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 330
              LA  ++  G   L       A+ +  H P    +Y NLA +   KG   +A   Y  
Sbjct: 252 HGNLACVYYEQGLIDLAIDTYRRAIELQPHFPD---AYCNLANALKEKGSVAEAEDCYNT 308

Query: 331 SVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLG 390
           +++      + +     L  ++ + G+   A+  + K LE++P+       L  +  Q G
Sbjct: 309 ALRLCPTHADSL---NNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQG 365

Query: 391 QIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGEEVPIE 449
           ++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +          +
Sbjct: 366 KLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA-----D 420

Query: 450 VLNNIGVIHFEKGEFESAHQSFKDAL 475
             +N+  IH + G    A  S++ AL
Sbjct: 421 AHSNLASIHKDSGNIPEAIASYRTAL 446



 Score = 42.0 bits (97), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 76/347 (21%), Positives = 141/347 (40%), Gaps = 57/347 (16%)

Query: 278 FFFTGQHFLVEQLTETA----LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK 333
              +  HF   +L  +A    LA+  + P  + +Y NL   Y  +G  ++A  +Y  +++
Sbjct: 49  LLLSSIHFQCRRLDRSAHFSTLAIKQN-PLLAEAYSNLGNVYKERGQLQEAIEHYRHALR 107

Query: 334 EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIE 393
              KP +FI  Y  L    +  GD   A+  +   L+  PD       LG++   LG++E
Sbjct: 108 L--KP-DFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLE 164

Query: 394 KAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNN 453
           +A+    KA +  P  A A+ +LG                    +    GE         
Sbjct: 165 EAKACYLKAIETQPNFAVAWSNLG-------------------CVFNAQGEIW------- 198

Query: 454 IGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVID-ASASMLQFKDMQLFHRFE 512
           + + HFEK    +   +F DA     ++ L +   +  + D A A+ L+   +       
Sbjct: 199 LAIHHFEKAV--TLDPNFLDA-----YINLGNVLKEARIFDRAVAAYLRALSLS------ 245

Query: 513 NDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKAR 572
              NH  +  N   V +    L++   DT      YR  +     + DAY  LA   K +
Sbjct: 246 --PNHAVVHGNLACVYYEQG-LIDLAIDT------YRRAIELQPHFPDAYCNLANALKEK 296

Query: 573 NNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAA 619
            ++  + +  N AL++   + ++L+ L +++ +  +  +A   +R A
Sbjct: 297 GSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKA 343


>gi|89886173|ref|NP_001034837.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
           110 kDa subunit [Sus scrofa]
 gi|122142735|sp|Q27HV0.1|OGT1_PIG RecName: Full=UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit;
           AltName: Full=O-GlcNAc transferase subunit p110;
           AltName: Full=O-linked N-acetylglucosamine transferase
           110 kDa subunit; Short=OGT
 gi|89114276|gb|ABD61726.1| O-linked N-acetylglucosamine transferase [Sus scrofa]
          Length = 1046

 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 104/479 (21%), Positives = 189/479 (39%), Gaps = 29/479 (6%)

Query: 142 GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 201
           G+ E A      +   + DN   LL  + + F   R   S  F   A++ +P    A   
Sbjct: 35  GDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYS- 93

Query: 202 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 261
            +G    + GQL +A + ++ AL+L P+ ++  + LA   + A +  G    ++    A 
Sbjct: 94  NLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEG---AVQAYVSAL 150

Query: 262 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 319
           +  P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G
Sbjct: 151 QYNPDLYCVRS--DLGNLLKALGR---LEEAKACYLKAIETQPNFAVAWSNLGCVFNAQG 205

Query: 320 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 379
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++    
Sbjct: 206 EIWLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVH 262

Query: 380 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGA-ALDAFKTARTL 438
             L  +Y + G I+ A +  R+A ++ P    A+ +L   L    + A A D + TA  L
Sbjct: 263 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRL 322

Query: 439 LKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASAS 498
                +      LNN+  I  E+G  E A + ++ AL       +       +   AS  
Sbjct: 323 CPTHADS-----LNNLANIKREQGNIEEAVRLYRKAL------EVFPEFAAAHSNLASVL 371

Query: 499 MLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDY 558
             Q K  +    ++     + +         N+   L+++ D   A   Y   +     +
Sbjct: 372 QQQGKLQEALMHYKEA---IRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAF 428

Query: 559 VDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFR 617
            DA+  LA+I K   N+  +I     ALK+   +P+A   L        DW    E  +
Sbjct: 429 ADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMK 487



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 86/386 (22%), Positives = 164/386 (42%), Gaps = 24/386 (6%)

Query: 93  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 152
           Y+ LG +  ++ + +E    A ++Y  A R+       ++     L+A G++E A  A+ 
Sbjct: 92  YSNLGNVYKERGQLQE----AIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 147

Query: 153 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 210
             L+ + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 148 SALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIETQPNFAVAWS-NLGCVFNAQ 204

Query: 211 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 270
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 205 GEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAAYLRALSLSPNHAVV 261

Query: 271 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 330
              LA  ++  G   L       A+ +  H P    +Y NLA +   KG   +A   Y  
Sbjct: 262 HGNLACVYYEQGLIDLAIDTYRRAIELQPHFPD---AYCNLANALKEKGSVAEAEDCYNT 318

Query: 331 SVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLG 390
           +++      + +     L  ++ + G+   A+  + K LE++P+       L  +  Q G
Sbjct: 319 ALRLCPTHADSL---NNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQG 375

Query: 391 QIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGEEVPIE 449
           ++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +          +
Sbjct: 376 KLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA-----D 430

Query: 450 VLNNIGVIHFEKGEFESAHQSFKDAL 475
             +N+  IH + G    A  S++ AL
Sbjct: 431 AHSNLASIHKDSGNIPEAIASYRTAL 456



 Score = 42.0 bits (97), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 76/347 (21%), Positives = 141/347 (40%), Gaps = 57/347 (16%)

Query: 278 FFFTGQHFLVEQLTETA----LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK 333
              +  HF   +L  +A    LA+  + P  + +Y NL   Y  +G  ++A  +Y  +++
Sbjct: 59  LLLSSIHFQCRRLDRSAHFSTLAIKQN-PLLAEAYSNLGNVYKERGQLQEAIEHYRHALR 117

Query: 334 EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIE 393
              KP +FI  Y  L    +  GD   A+  +   L+  PD       LG++   LG++E
Sbjct: 118 L--KP-DFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLE 174

Query: 394 KAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNN 453
           +A+    KA +  P  A A+ +LG                    +    GE         
Sbjct: 175 EAKACYLKAIETQPNFAVAWSNLG-------------------CVFNAQGEIW------- 208

Query: 454 IGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVID-ASASMLQFKDMQLFHRFE 512
           + + HFEK    +   +F DA     ++ L +   +  + D A A+ L+   +       
Sbjct: 209 LAIHHFEKAV--TLDPNFLDA-----YINLGNVLKEARIFDRAVAAYLRALSLS------ 255

Query: 513 NDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKAR 572
              NH  +  N   V +    L++   DT      YR  +     + DAY  LA   K +
Sbjct: 256 --PNHAVVHGNLACVYYEQG-LIDLAIDT------YRRAIELQPHFPDAYCNLANALKEK 306

Query: 573 NNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAA 619
            ++  + +  N AL++   + ++L+ L +++ +  +  +A   +R A
Sbjct: 307 GSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKA 353


>gi|403305183|ref|XP_003943149.1| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit isoform
           2 [Saimiri boliviensis boliviensis]
          Length = 1036

 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 104/479 (21%), Positives = 189/479 (39%), Gaps = 29/479 (6%)

Query: 142 GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 201
           G+ E A      +   + DN   LL  + + F   R   S  F   A++ +P    A   
Sbjct: 25  GDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYS- 83

Query: 202 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 261
            +G    + GQL +A + ++ AL+L P+ ++  + LA   + A +  G    ++    A 
Sbjct: 84  NLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEG---AVQAYVSAL 140

Query: 262 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 319
           +  P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G
Sbjct: 141 QYNPDLYCVRS--DLGNLLKALGR---LEEAKACYLKAIETQPNFAVAWSNLGCVFNAQG 195

Query: 320 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 379
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++    
Sbjct: 196 EIWLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVH 252

Query: 380 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGA-ALDAFKTARTL 438
             L  +Y + G I+ A +  R+A ++ P    A+ +L   L    + A A D + TA  L
Sbjct: 253 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRL 312

Query: 439 LKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASAS 498
                +      LNN+  I  E+G  E A + ++ AL       +       +   AS  
Sbjct: 313 CPTHADS-----LNNLANIKREQGNIEEAVRLYRKAL------EVFPEFAAAHSNLASVL 361

Query: 499 MLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDY 558
             Q K  +    ++     + +         N+   L+++ D   A   Y   +     +
Sbjct: 362 QQQGKLQEALMHYKEA---IRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAF 418

Query: 559 VDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFR 617
            DA+  LA+I K   N+  +I     ALK+   +P+A   L        DW    E  +
Sbjct: 419 ADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMK 477



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 86/386 (22%), Positives = 164/386 (42%), Gaps = 24/386 (6%)

Query: 93  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 152
           Y+ LG +  ++ + +E    A ++Y  A R+       ++     L+A G++E A  A+ 
Sbjct: 82  YSNLGNVYKERGQLQE----AIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 137

Query: 153 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 210
             L+ + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 138 SALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIETQPNFAVAWS-NLGCVFNAQ 194

Query: 211 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 270
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 195 GEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAAYLRALSLSPNHAVV 251

Query: 271 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 330
              LA  ++  G   L       A+ +  H P    +Y NLA +   KG   +A   Y  
Sbjct: 252 HGNLACVYYEQGLIDLAIDTYRRAIELQPHFPD---AYCNLANALKEKGSVAEAEDCYNT 308

Query: 331 SVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLG 390
           +++      + +     L  ++ + G+   A+  + K LE++P+       L  +  Q G
Sbjct: 309 ALRLCPTHADSL---NNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQG 365

Query: 391 QIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGEEVPIE 449
           ++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +          +
Sbjct: 366 KLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA-----D 420

Query: 450 VLNNIGVIHFEKGEFESAHQSFKDAL 475
             +N+  IH + G    A  S++ AL
Sbjct: 421 AHSNLASIHKDSGNIPEAIASYRTAL 446



 Score = 42.0 bits (97), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 76/347 (21%), Positives = 141/347 (40%), Gaps = 57/347 (16%)

Query: 278 FFFTGQHFLVEQLTETA----LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK 333
              +  HF   +L  +A    LA+  + P  + +Y NL   Y  +G  ++A  +Y  +++
Sbjct: 49  LLLSSIHFQCRRLDRSAHFSTLAIKQN-PLLAEAYSNLGNVYKERGQLQEAIEHYRHALR 107

Query: 334 EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIE 393
              KP +FI  Y  L    +  GD   A+  +   L+  PD       LG++   LG++E
Sbjct: 108 L--KP-DFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLE 164

Query: 394 KAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNN 453
           +A+    KA +  P  A A+ +LG                    +    GE         
Sbjct: 165 EAKACYLKAIETQPNFAVAWSNLG-------------------CVFNAQGEIW------- 198

Query: 454 IGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVID-ASASMLQFKDMQLFHRFE 512
           + + HFEK    +   +F DA     ++ L +   +  + D A A+ L+   +       
Sbjct: 199 LAIHHFEKAV--TLDPNFLDA-----YINLGNVLKEARIFDRAVAAYLRALSLS------ 245

Query: 513 NDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKAR 572
              NH  +  N   V +    L++   DT      YR  +     + DAY  LA   K +
Sbjct: 246 --PNHAVVHGNLACVYYEQG-LIDLAIDT------YRRAIELQPHFPDAYCNLANALKEK 296

Query: 573 NNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAA 619
            ++  + +  N AL++   + ++L+ L +++ +  +  +A   +R A
Sbjct: 297 GSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKA 343


>gi|395546237|ref|XP_003774996.1| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit
           [Sarcophilus harrisii]
          Length = 1075

 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 104/479 (21%), Positives = 189/479 (39%), Gaps = 29/479 (6%)

Query: 142 GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 201
           G+ E A      +   + DN   LL  + + F   R   S  F   A++ +P    A   
Sbjct: 65  GDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYS- 123

Query: 202 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 261
            +G    + GQL +A + ++ AL+L P+ ++  + LA   + A +  G    ++    A 
Sbjct: 124 NLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEG---AVQAYVSAL 180

Query: 262 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 319
           +  P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G
Sbjct: 181 QYNPDLYCVRS--DLGNLLKALGR---LEEAKACYLKAIETQPNFAVAWSNLGCVFNAQG 235

Query: 320 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 379
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++    
Sbjct: 236 EIWLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVH 292

Query: 380 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGA-ALDAFKTARTL 438
             L  +Y + G I+ A +  R+A ++ P    A+ +L   L    + A A D + TA  L
Sbjct: 293 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRL 352

Query: 439 LKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASAS 498
                +      LNN+  I  E+G  E A + ++ AL       +       +   AS  
Sbjct: 353 CPTHADS-----LNNLANIKREQGNIEEAVRLYRKAL------EVFPEFAAAHSNLASVL 401

Query: 499 MLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDY 558
             Q K  +    ++     + +         N+   L+++ D   A   Y   +     +
Sbjct: 402 QQQGKLQEALMHYKEA---IRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAF 458

Query: 559 VDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFR 617
            DA+  LA+I K   N+  +I     ALK+   +P+A   L        DW    E  +
Sbjct: 459 ADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMK 517



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 86/386 (22%), Positives = 164/386 (42%), Gaps = 24/386 (6%)

Query: 93  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 152
           Y+ LG +  ++ + +E    A ++Y  A R+       ++     L+A G++E A  A+ 
Sbjct: 122 YSNLGNVYKERGQLQE----AIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 177

Query: 153 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 210
             L+ + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 178 SALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIETQPNFAVAWS-NLGCVFNAQ 234

Query: 211 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 270
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 235 GEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAAYLRALSLSPNHAVV 291

Query: 271 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 330
              LA  ++  G   L       A+ +  H P    +Y NLA +   KG   +A   Y  
Sbjct: 292 HGNLACVYYEQGLIDLAIDTYRRAIELQPHFPD---AYCNLANALKEKGSVAEAEDCYNT 348

Query: 331 SVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLG 390
           +++      + +     L  ++ + G+   A+  + K LE++P+       L  +  Q G
Sbjct: 349 ALRLCPTHADSL---NNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQG 405

Query: 391 QIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGEEVPIE 449
           ++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +          +
Sbjct: 406 KLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA-----D 460

Query: 450 VLNNIGVIHFEKGEFESAHQSFKDAL 475
             +N+  IH + G    A  S++ AL
Sbjct: 461 AHSNLASIHKDSGNIPEAIASYRTAL 486



 Score = 42.4 bits (98), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 76/347 (21%), Positives = 141/347 (40%), Gaps = 57/347 (16%)

Query: 278 FFFTGQHFLVEQLTETA----LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK 333
              +  HF   +L  +A    LA+  + P  + +Y NL   Y  +G  ++A  +Y  +++
Sbjct: 89  LLLSSIHFQCRRLDRSAHFSTLAIKQN-PLLAEAYSNLGNVYKERGQLQEAIEHYRHALR 147

Query: 334 EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIE 393
              KP +FI  Y  L    +  GD   A+  +   L+  PD       LG++   LG++E
Sbjct: 148 L--KP-DFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLE 204

Query: 394 KAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNN 453
           +A+    KA +  P  A A+ +LG                    +    GE         
Sbjct: 205 EAKACYLKAIETQPNFAVAWSNLG-------------------CVFNAQGEIW------- 238

Query: 454 IGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVID-ASASMLQFKDMQLFHRFE 512
           + + HFEK    +   +F DA     ++ L +   +  + D A A+ L+   +       
Sbjct: 239 LAIHHFEKAV--TLDPNFLDA-----YINLGNVLKEARIFDRAVAAYLRALSLS------ 285

Query: 513 NDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKAR 572
              NH  +  N   V +    L++   DT      YR  +     + DAY  LA   K +
Sbjct: 286 --PNHAVVHGNLACVYYEQG-LIDLAIDT------YRRAIELQPHFPDAYCNLANALKEK 336

Query: 573 NNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAA 619
            ++  + +  N AL++   + ++L+ L +++ +  +  +A   +R A
Sbjct: 337 GSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKA 383


>gi|268317298|ref|YP_003291017.1| hypothetical protein Rmar_1745 [Rhodothermus marinus DSM 4252]
 gi|262334832|gb|ACY48629.1| TPR repeat-containing protein [Rhodothermus marinus DSM 4252]
          Length = 402

 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 84/380 (22%), Positives = 159/380 (41%), Gaps = 39/380 (10%)

Query: 99  IETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEAD 158
           ++ +Q  +   F  A    + A+R D  EP+ +  +G+L     + ++A +A++ VL+ D
Sbjct: 41  LQAEQALQRYDFAQALALADSAARYDSDEPAIYFLQGRLYAEMAQFDRAEAAYQEVLQRD 100

Query: 159 RDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQ 218
            +        A ++  + R+ +++  Y++ LQ +P  P      +     +LG +  A  
Sbjct: 101 PNFRGIWHNLANLKARQHRFREAIALYQKELQRYPGAP--TWQAMARAYRELGVVDSAAY 158

Query: 219 AFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHF 278
           A+++ALQLD   V A + +  +    ++     + +   QRA  + P      NYL    
Sbjct: 159 AYRQALQLDSTYVPAYIGMTQL---LDDEGRFAEALTYAQRAQALDPDNPET-NYLLGEL 214

Query: 279 FFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEK--AGLYYMASVKEIN 336
                 F  E L      V    P  + ++Y+L ++    G  E+  A L     ++E+N
Sbjct: 215 LMKNGRF-AEALPYLQ-RVVEAWPWHAGAHYSLGQALLRVGRREEGEAALQRYEQLRELN 272

Query: 337 KPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQ 396
                        QVQ+            E+ +   PDN     ALG    + G+ E+A 
Sbjct: 273 ------------AQVQM-----------LEEAVRTTPDNPYAFAALGAALRRSGRYEEAL 309

Query: 397 ELLRKAAKIDPRDAQAFIDLGEL-LISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIG 455
                A  + P + +   +L  L  +  DT AA+  ++ A        +   I+   N+G
Sbjct: 310 RAYTIALFLSPGNPEILNNLAALYFVQGDTLAAMQTYRRALQ-----ADSTFIDAWLNLG 364

Query: 456 VIHFEKGEFESAHQSFKDAL 475
           V+H  +GE  +A  +++  L
Sbjct: 365 VLHALRGERAAAAYAWRQVL 384



 Score = 44.7 bits (104), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 67/299 (22%), Positives = 121/299 (40%), Gaps = 37/299 (12%)

Query: 455 GVIHFEKGEFESAHQSFKDALGD-----GIWLTLLDSKTKTYVIDASASMLQFKDMQLFH 509
           G ++ E  +F+ A  ++++ L       GIW  L + K + +    + ++ Q K++Q   
Sbjct: 77  GRLYAEMAQFDRAEAAYQEVLQRDPNFRGIWHNLANLKARQHRFREAIALYQ-KELQ--- 132

Query: 510 RFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIA 569
           R+          W        +AR   ++    +A+  YR  L     YV AY+ +  + 
Sbjct: 133 RYPGAPT-----WQA------MARAYRELGVVDSAAYAYRQALQLDSTYVPAYIGMTQLL 181

Query: 570 KARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSY 629
                   ++     A  ++   P    +LG+L +KN  + +A    +   +A       
Sbjct: 182 DDEGRFAEALTYAQRAQALDPDNPETNYLLGELLMKNGRFAEALPYLQRVVEAWPWHAG- 240

Query: 630 ATLSLGNWNYFAALRNEKRAPKLEATH-LEKAKELYTRV------IVQHTSNLYAANGAG 682
           A  SLG     A LR  +R     A    E+ +EL  +V      +     N YA    G
Sbjct: 241 AHYSLGQ----ALLRVGRREEGEAALQRYEQLRELNAQVQMLEEAVRTTPDNPYAFAALG 296

Query: 683 VVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCL 741
             L   G+++ +   +T     + G+     P++  NLA +YF QG+   AM+ Y+  L
Sbjct: 297 AALRRSGRYEEALRAYTIALFLSPGN-----PEILNNLAALYFVQGDTLAAMQTYRRAL 350


>gi|196000432|ref|XP_002110084.1| hypothetical protein TRIADDRAFT_53679 [Trichoplax adhaerens]
 gi|190588208|gb|EDV28250.1| hypothetical protein TRIADDRAFT_53679 [Trichoplax adhaerens]
          Length = 1330

 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 112/507 (22%), Positives = 208/507 (41%), Gaps = 92/507 (18%)

Query: 50  YFKQGKVEQFRQILEEG---SSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREK 106
           Y  QGK E+   + E+    S P +   + DV     A  N +G  Y + GK     REK
Sbjct: 161 YSNQGKYEEAISMYEKSLKISLPVLGHNHPDV----AASYNNMGEAYRHQGK-----REK 211

Query: 107 EEHFILATQYYNKASRIDM-----HEP---STWVGKGQLLLAKGEVEQASSAF----KIV 154
                 A   Y K+ +I +     + P   +++   G +   +G+ E+A S +    KI 
Sbjct: 212 ------AISMYEKSLKIRLSVLGHNHPDVAASYNNMGAVYSDQGKHEEAISMYEKSLKIT 265

Query: 155 LEADRDNVPALL----GQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 210
           L     N P +         V  N+G+Y +++  YK++L++  S  G       +    L
Sbjct: 266 LSIFGHNHPDVAVSYNNIGAVYSNQGKYEEAISMYKKSLKIRLSVFGHNHPNAAVSYNNL 325

Query: 211 GQLGKARQAFQRALQLDPENVEALVALAVMD-----LQANEAAGIRKGMEKMQRAFEIY- 264
           G +   +   + A+ +  +++E ++++   +     +  N    +     K + A  +Y 
Sbjct: 326 GTVYLDQSKHEEAISMYKKSLEIIISVLGHNHPDVAVSYNNMGAVYSNQGKHEEAISMYE 385

Query: 265 --------------PYCAMALNYLANHFFFTGQH----FLVEQLTETALAVTNHG-PTKS 305
                         P   ++ N L N +   G++     + E+  +  L+V +H  P  +
Sbjct: 386 KSLKIKLSVLGHNHPDITVSYNNLGNAYLDQGKYEEAISMYEKSLKIRLSVLDHNHPDIA 445

Query: 306 HSYYNLARSYHSKGDYEKAGLYYMASVK------EINKPHEFIFPYYGLGQVQLKLGDFR 359
            SY N+  +Y  +G +E+A   Y  S+K        N P +    Y  LG          
Sbjct: 446 VSYNNMGEAYRHQGKHEEAISMYEQSLKIRLSVLGHNHP-DVAMSYNNLGNAYRHQSKHE 504

Query: 360 SALTNFEKVLEI--------YPDNCETLKALGHIYVQLGQIEKAQELLRKAAKI------ 405
            A++ +EK L+I        +PD   +   +G +Y   G+ E+A  + +K+ KI      
Sbjct: 505 EAISMYEKSLKITLPVLGHNHPDVAGSYSNMGAVYSNQGKYEEAISMNKKSLKIRLSVLG 564

Query: 406 --DPRDAQAFIDLGELLISSDTGAALDAF----KTARTLLKKAGEEVP--IEVLNNIGVI 457
              P  A ++ ++GE  +    G   +A     K+ +  L   G   P      NN+G  
Sbjct: 565 HNHPDVAASYNNMGE--VYRHQGKHEEAISMYEKSLKITLSVLGHNHPDVAASYNNLGNT 622

Query: 458 HFEKGEFESAHQSFKDALGDGIWLTLL 484
           +F +G++E A   ++ +L   I L++L
Sbjct: 623 YFNQGKYEEAISMYEKSL--KIRLSVL 647



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 161/744 (21%), Positives = 302/744 (40%), Gaps = 132/744 (17%)

Query: 89  LGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDM-----HEPSTWVGK---GQLLLA 140
           + V Y  +G + + Q + EE    A   Y K+ +I +     + P+  V     G + L 
Sbjct: 276 VAVSYNNIGAVYSNQGKYEE----AISMYKKSLKIRLSVFGHNHPNAAVSYNNLGTVYLD 331

Query: 141 KGEVEQASSAFK----IVLEADRDNVPALL----GQACVEFNRGRYSDSLEFYKRALQVH 192
           + + E+A S +K    I++     N P +         V  N+G++ +++  Y+++L++ 
Sbjct: 332 QSKHEEAISMYKKSLEIIISVLGHNHPDVAVSYNNMGAVYSNQGKHEEAISMYEKSLKIK 391

Query: 193 PSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRK 252
            S  G     I +    LG     +  ++ A+ +  ++++  + L+V+D           
Sbjct: 392 LSVLGHNHPDITVSYNNLGNAYLDQGKYEEAISMYEKSLK--IRLSVLDHN--------- 440

Query: 253 GMEKMQRAFEIYPYCAMALNYLANHFFFTGQH----FLVEQLTETALAVTNHG-PTKSHS 307
                      +P  A++ N +   +   G+H     + EQ  +  L+V  H  P  + S
Sbjct: 441 -----------HPDIAVSYNNMGEAYRHQGKHEEAISMYEQSLKIRLSVLGHNHPDVAMS 489

Query: 308 YYNLARSYHSKGDYEKAGLYYMASVKEI------NKPHEFIFPYYGLGQVQLKLGDFRSA 361
           Y NL  +Y  +  +E+A   Y  S+K        N P +    Y  +G V    G +  A
Sbjct: 490 YNNLGNAYRHQSKHEEAISMYEKSLKITLPVLGHNHP-DVAGSYSNMGAVYSNQGKYEEA 548

Query: 362 LTNFEKVLEI--------YPDNCETLKALGHIYVQLGQIEKAQELLRKAAKI-------- 405
           ++  +K L+I        +PD   +   +G +Y   G+ E+A  +  K+ KI        
Sbjct: 549 ISMNKKSLKIRLSVLGHNHPDVAASYNNMGEVYRHQGKHEEAISMYEKSLKITLSVLGHN 608

Query: 406 DPRDAQAFIDLGELLISSDTGAALDAF----KTARTLLKKAGEEVP-IEVL-NNIGVIHF 459
            P  A ++ +LG      + G   +A     K+ +  L   G   P + VL NN+G ++ 
Sbjct: 609 HPDVAASYNNLGNTYF--NQGKYEEAISMYEKSLKIRLSVLGHNHPDVAVLYNNMGAVNL 666

Query: 460 EKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVE 519
           ++G++E A   ++ +L   I L++L         D +AS   + +M   +R++  G H E
Sbjct: 667 DQGKYEEAISMYEKSLK--ITLSVLGHNHP----DVAAS---YNNMGEAYRYQ--GKHEE 715

Query: 520 -LPWNKVTVLFNLARLLEQIHDTVAASV-----LYRLILFKYQDYVDAY-----LRLAAI 568
            +   + ++   L+ +L   H  +A S       YR    K+++ +  Y     + L+ +
Sbjct: 716 AISMYEKSLKITLS-VLGHNHPDIAGSYNNLGNAYRH-QGKHEEAISMYEKSLKITLSVL 773

Query: 569 AKARNNLQLSIELVNEALKVNGKYPNALSM--------LGDLELKNDD----WVKAKETF 616
                ++  S   +  A    GKY  A+SM        L  L+  + D    +    E +
Sbjct: 774 GHNHPDVAGSYNNLGNAYSNQGKYEEAISMYEKSLKIRLSVLDHNHPDIAASYNNMGEAY 833

Query: 617 RAASDATDGKDSYAT-----LSLGNWNY--FAALRNEKRAPKLEATHLEKA-----KELY 664
           R      +    Y       LS+   N+   A L N   A  L+    E+A     K L 
Sbjct: 834 RHQGKREEAISMYEKSLKIRLSVLGHNHPDVAVLYNNMGAVYLDQGKHEEAISMHEKSLK 893

Query: 665 TRVIV---QHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDV---WI 718
            R+ V    H     + N  G V + +G+ + +  +  +  +     +    PDV   + 
Sbjct: 894 IRLSVLGHNHPDVAGSYNNIGTVYSNQGKHEEAISMKKKSLKIRLSVLGHNHPDVAASYN 953

Query: 719 NLAHVYFAQGNFALAMKMYQNCLR 742
           N+  VY  QG    A+ MY+  L+
Sbjct: 954 NMGEVYRHQGKHEEAISMYEKSLK 977



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 111/503 (22%), Positives = 202/503 (40%), Gaps = 92/503 (18%)

Query: 46   IAREYFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQRE 105
            +   Y  QGK E+   + E+  S +I     D  +  IA        Y  +G+    Q +
Sbjct: 787  LGNAYSNQGKYEEAISMYEK--SLKIRLSVLDHNHPDIA------ASYNNMGEAYRHQGK 838

Query: 106  KEEHFILATQYYNKASRIDM-----HEPSTWV---GKGQLLLAKGEVEQASS----AFKI 153
            +EE    A   Y K+ +I +     + P   V     G + L +G+ E+A S    + KI
Sbjct: 839  REE----AISMYEKSLKIRLSVLGHNHPDVAVLYNNMGAVYLDQGKHEEAISMHEKSLKI 894

Query: 154  VLEADRDNVPALLGQ----ACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYK 209
             L     N P + G       V  N+G++ +++   K++L++  S  G     +      
Sbjct: 895  RLSVLGHNHPDVAGSYNNIGTVYSNQGKHEEAISMKKKSLKIRLSVLGHNHPDVAASYNN 954

Query: 210  LGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGME-------KMQRAFE 262
            +G++ + +   + A+ +  ++++  + L+V+       A     +        K + A  
Sbjct: 955  MGEVYRHQGKHEEAISMYEKSLK--ITLSVLGHNHPHVAASYNNLGNAYLDHGKHEEAIS 1012

Query: 263  IY---------------PYCAMALNYLANHFFFTGQHFLVEQLTETALAVT------NHG 301
            +Y               P  A + N L N +   G+H     + E +L +T      NH 
Sbjct: 1013 MYEKSLKIRLAVLGHNHPDVAGSYNNLGNAYRHQGKHEEAISMYEKSLKITLSVLGHNH- 1071

Query: 302  PTKSHSYYNLARSYHSKGDYEKAGLYYMASVK------EINKPHEFIFPYYGLGQVQLKL 355
            P  + SY N+   Y ++G YE+A   Y  S+K      + N P +    Y  LG      
Sbjct: 1072 PDIAASYNNMGAVYSNQGKYEEAISMYEKSLKIRLSVLDHNHP-DIAGSYNNLGNAHRHQ 1130

Query: 356  GDFRSALTNFEKVLEI--------YPDNCETLKALGHIYVQLGQIEKAQELLRKAAKI-- 405
            G    A++ +EK L+I        +PD   +   LG+ +   G++E+A  +  K+ KI  
Sbjct: 1131 GKLEEAISMYEKSLKIRLSVLDHNHPDVAVSYNNLGNAHRHQGKLEEAISMYEKSLKITL 1190

Query: 406  ------DPRDAQAFIDLGELLISSDTGAALDA-------FKTARTLLKKAGEEVPIEVLN 452
                   P  A  + ++G + +  D G   +A        K   ++L      V +   N
Sbjct: 1191 SVLDHNHPHVAAIYNNMGAVYV--DQGKHEEAISMYEKSLKITLSVLDHNHPHVAVS-YN 1247

Query: 453  NIGVIHFEKGEFESAHQSFKDAL 475
            NI  ++  +G+ E A   +K +L
Sbjct: 1248 NIRAVYSNQGKHEEAISMYKKSL 1270



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 154/756 (20%), Positives = 301/756 (39%), Gaps = 122/756 (16%)

Query: 93   YTYLGKIETKQREKEEHFILATQYYNKASRIDM-----HEP---STWVGKGQLLLAKGEV 144
            Y  +G++   Q + EE    A   Y K+ +I +     + P   +++   G     +G+ 
Sbjct: 574  YNNMGEVYRHQGKHEE----AISMYEKSLKITLSVLGHNHPDVAASYNNLGNTYFNQGKY 629

Query: 145  EQASSAF----KIVLEADRDNVP--ALL--GQACVEFNRGRYSDSLEFYKRALQVHPSCP 196
            E+A S +    KI L     N P  A+L      V  ++G+Y +++  Y+++L++  S  
Sbjct: 630  EEAISMYEKSLKIRLSVLGHNHPDVAVLYNNMGAVNLDQGKYEEAISMYEKSLKITLSVL 689

Query: 197  GAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGME- 255
            G     +      +G+  + +   + A+ +  ++++  + L+V+     + AG    +  
Sbjct: 690  GHNHPDVAASYNNMGEAYRYQGKHEEAISMYEKSLK--ITLSVLGHNHPDIAGSYNNLGN 747

Query: 256  ------KMQRAFEIY---------------PYCAMALNYLANHFFFTGQH----FLVEQL 290
                  K + A  +Y               P  A + N L N +   G++     + E+ 
Sbjct: 748  AYRHQGKHEEAISMYEKSLKITLSVLGHNHPDVAGSYNNLGNAYSNQGKYEEAISMYEKS 807

Query: 291  TETALAVTNHG-PTKSHSYYNLARSYHSKGDYEKAGLYYMASVK------EINKPHEFIF 343
             +  L+V +H  P  + SY N+  +Y  +G  E+A   Y  S+K        N P +   
Sbjct: 808  LKIRLSVLDHNHPDIAASYNNMGEAYRHQGKREEAISMYEKSLKIRLSVLGHNHP-DVAV 866

Query: 344  PYYGLGQVQLKLGDFRSALTNFEKVLEI--------YPDNCETLKALGHIYVQLGQIEKA 395
             Y  +G V L  G    A++  EK L+I        +PD   +   +G +Y   G+ E+A
Sbjct: 867  LYNNMGAVYLDQGKHEEAISMHEKSLKIRLSVLGHNHPDVAGSYNNIGTVYSNQGKHEEA 926

Query: 396  QELLRKAAKI--------DPRDAQAFIDLGELLISSDTGAALDAF----KTARTLLKKAG 443
              + +K+ KI         P  A ++ ++GE  +    G   +A     K+ +  L   G
Sbjct: 927  ISMKKKSLKIRLSVLGHNHPDVAASYNNMGE--VYRHQGKHEEAISMYEKSLKITLSVLG 984

Query: 444  EEVP--IEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSK----TKTYVIDASA 497
               P      NN+G  + + G+ E A   ++ +L   I L +L         +Y    +A
Sbjct: 985  HNHPHVAASYNNLGNAYLDHGKHEEAISMYEKSLK--IRLAVLGHNHPDVAGSYNNLGNA 1042

Query: 498  SMLQFKDMQLFHRFEND---------GNHVEL--PWNKVTVLFNLARLLEQIHDTVAASV 546
               Q K  +    +E            NH ++   +N +  +++     E+       S+
Sbjct: 1043 YRHQGKHEEAISMYEKSLKITLSVLGHNHPDIAASYNNMGAVYSNQGKYEEAISMYEKSL 1102

Query: 547  LYRLILFKYQ--DYVDAYLRLAAIAKARNNLQLSIELVNEALKV-----NGKYPNALSML 599
              RL +  +   D   +Y  L    + +  L+ +I +  ++LK+     +  +P+     
Sbjct: 1103 KIRLSVLDHNHPDIAGSYNNLGNAHRHQGKLEEAISMYEKSLKIRLSVLDHNHPDVAVSY 1162

Query: 600  GDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNY--FAALRNEKRAPKLEATHL 657
             +L   +    K +E       +        TLS+ + N+   AA+ N   A  ++    
Sbjct: 1163 NNLGNAHRHQGKLEEAISMYEKSLK-----ITLSVLDHNHPHVAAIYNNMGAVYVDQGKH 1217

Query: 658  EKAKELY------TRVIVQHTSNLYAA--NGAGVVLAEKGQFDVSKDLFTQVQEAASGSV 709
            E+A  +Y      T  ++ H     A   N    V + +G+ + +  ++ +  +  S  +
Sbjct: 1218 EEAISMYEKSLKITLSVLDHNHPHVAVSYNNIRAVYSNQGKHEEAISMYKKSLKITSSVL 1277

Query: 710  FVQMPDV---WINLAHVYFAQGNFALAMKMYQNCLR 742
                PDV   + NL + Y  QG    A+ MY+  L+
Sbjct: 1278 GHNHPDVALSYNNLGNAYDKQGKHEEAISMYEKSLK 1313



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 143/709 (20%), Positives = 287/709 (40%), Gaps = 112/709 (15%)

Query: 93  YTYLGKIETKQREKEEHFILATQYYNKASRIDM-----HEP---STWVGKGQLLLAKGEV 144
           Y  +G + + Q + EE    A   Y K+ +I +     + P   +++   G+    +G+ 
Sbjct: 154 YNNMGAVYSNQGKYEE----AISMYEKSLKISLPVLGHNHPDVAASYNNMGEAYRHQGKR 209

Query: 145 EQASSAF----KIVLEADRDNVPALLGQ----ACVEFNRGRYSDSLEFYKRALQVHPSCP 196
           E+A S +    KI L     N P +         V  ++G++ +++  Y+++L++  S  
Sbjct: 210 EKAISMYEKSLKIRLSVLGHNHPDVAASYNNMGAVYSDQGKHEEAISMYEKSLKITLSIF 269

Query: 197 GAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEK 256
           G     + +    +G +   +  ++ A+ +  ++++  + L+V                 
Sbjct: 270 GHNHPDVAVSYNNIGAVYSNQGKYEEAISMYKKSLK--IRLSVFGHN------------- 314

Query: 257 MQRAFEIYPYCAMALNYLANHFFFTGQH----FLVEQLTETALAVTNHG-PTKSHSYYNL 311
                  +P  A++ N L   +    +H     + ++  E  ++V  H  P  + SY N+
Sbjct: 315 -------HPNAAVSYNNLGTVYLDQSKHEEAISMYKKSLEIIISVLGHNHPDVAVSYNNM 367

Query: 312 ARSYHSKGDYEKAGLYYMASVK------EINKPHEFIFPYYGLGQVQLKLGDFRSALTNF 365
              Y ++G +E+A   Y  S+K        N P +    Y  LG   L  G +  A++ +
Sbjct: 368 GAVYSNQGKHEEAISMYEKSLKIKLSVLGHNHP-DITVSYNNLGNAYLDQGKYEEAISMY 426

Query: 366 EKVLEI--------YPDNCETLKALGHIYVQLGQIEKAQELLRKAAKI--------DPRD 409
           EK L+I        +PD   +   +G  Y   G+ E+A  +  ++ KI         P  
Sbjct: 427 EKSLKIRLSVLDHNHPDIAVSYNNMGEAYRHQGKHEEAISMYEQSLKIRLSVLGHNHPDV 486

Query: 410 AQAFIDLGELL-ISSDTGAALDAF-KTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFE 465
           A ++ +LG      S    A+  + K+ +  L   G   P      +N+G ++  +G++E
Sbjct: 487 AMSYNNLGNAYRHQSKHEEAISMYEKSLKITLPVLGHNHPDVAGSYSNMGAVYSNQGKYE 546

Query: 466 SAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVE-LPWNK 524
            A    K +L   I L++L         D +AS   + +M   +R +  G H E +   +
Sbjct: 547 EAISMNKKSLK--IRLSVLGHNHP----DVAAS---YNNMGEVYRHQ--GKHEEAISMYE 595

Query: 525 VTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNE 584
            ++   L+ +L   H  VAAS         Y +  + Y       +A +  + S+++   
Sbjct: 596 KSLKITLS-VLGHNHPDVAAS---------YNNLGNTYFNQGKYEEAISMYEKSLKIRLS 645

Query: 585 ALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALR 644
            L  N  +P+   +  ++   N D  K +E       +   K + + L   + +  A+  
Sbjct: 646 VLGHN--HPDVAVLYNNMGAVNLDQGKYEEAISMYEKSL--KITLSVLGHNHPDVAASYN 701

Query: 645 NEKRAPKLEATHLEKAKELY------TRVIVQHTSNLYAA--NGAGVVLAEKGQFDVSKD 696
           N   A + +  H E+A  +Y      T  ++ H     A   N  G     +G+ + +  
Sbjct: 702 NMGEAYRYQGKH-EEAISMYEKSLKITLSVLGHNHPDIAGSYNNLGNAYRHQGKHEEAIS 760

Query: 697 LFTQVQEAASGSVFVQMPDV---WINLAHVYFAQGNFALAMKMYQNCLR 742
           ++ +  +     +    PDV   + NL + Y  QG +  A+ MY+  L+
Sbjct: 761 MYEKSLKITLSVLGHNHPDVAGSYNNLGNAYSNQGKYEEAISMYEKSLK 809



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 116/530 (21%), Positives = 219/530 (41%), Gaps = 92/530 (17%)

Query: 286 LVEQLTETALAVTNHG-PTKSHSYYNLARSYHSKGDYEKAGLYYMASVK------EINKP 338
           + ++L +  L+V  H  P  + SY N+   Y ++G YE+A   Y  S+K        N P
Sbjct: 131 MFKKLLKITLSVLGHNHPDAAASYNNMGAVYSNQGKYEEAISMYEKSLKISLPVLGHNHP 190

Query: 339 HEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEI--------YPDNCETLKALGHIYVQLG 390
            +    Y  +G+     G    A++ +EK L+I        +PD   +   +G +Y   G
Sbjct: 191 -DVAASYNNMGEAYRHQGKREKAISMYEKSLKIRLSVLGHNHPDVAASYNNMGAVYSDQG 249

Query: 391 QIEKAQELLRKAAKI--------DPRDAQAFIDLGELLISSDTGAALDAF----KTARTL 438
           + E+A  +  K+ KI         P  A ++ ++G   + S+ G   +A     K+ +  
Sbjct: 250 KHEEAISMYEKSLKITLSIFGHNHPDVAVSYNNIGA--VYSNQGKYEEAISMYKKSLKIR 307

Query: 439 LKKAGEEVPIEVL--NNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDAS 496
           L   G   P   +  NN+G ++ ++ + E A   +K +L   I +++L        +   
Sbjct: 308 LSVFGHNHPNAAVSYNNLGTVYLDQSKHEEAISMYKKSL--EIIISVLGHNHPDVAV--- 362

Query: 497 ASMLQFKDMQLFHRFENDGNHVE-LPWNKVTVLFNLARLLEQIHD-TVAASVLYRLIL-- 552
                + +M     + N G H E +   + ++   L+ L     D TV+ + L    L  
Sbjct: 363 ----SYNNMGAV--YSNQGKHEEAISMYEKSLKIKLSVLGHNHPDITVSYNNLGNAYLDQ 416

Query: 553 FKYQDYVDAY-----LRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSM--------- 598
            KY++ +  Y     +RL+ +     ++ +S   + EA +  GK+  A+SM         
Sbjct: 417 GKYEEAISMYEKSLKIRLSVLDHNHPDIAVSYNNMGEAYRHQGKHEEAISMYEQSLKIRL 476

Query: 599 --LG----DLELKNDDWVKAKETFRAASDATDGKDSY-----ATLSL---------GNWN 638
             LG    D+ +  ++   A   +R  S   +    Y      TL +         G+++
Sbjct: 477 SVLGHNHPDVAMSYNNLGNA---YRHQSKHEEAISMYEKSLKITLPVLGHNHPDVAGSYS 533

Query: 639 YFAALRNEKRAPKLEATHLEKAKELYTRVIV---QHTSNLYAANGAGVVLAEKGQFDVSK 695
              A+ + +   + EA  + K K L  R+ V    H     + N  G V   +G+ + + 
Sbjct: 534 NMGAVYSNQGKYE-EAISMNK-KSLKIRLSVLGHNHPDVAASYNNMGEVYRHQGKHEEAI 591

Query: 696 DLFTQVQEAASGSVFVQMPDV---WINLAHVYFAQGNFALAMKMYQNCLR 742
            ++ +  +     +    PDV   + NL + YF QG +  A+ MY+  L+
Sbjct: 592 SMYEKSLKITLSVLGHNHPDVAASYNNLGNTYFNQGKYEEAISMYEKSLK 641



 Score = 48.1 bits (113), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 51/197 (25%), Positives = 87/197 (44%), Gaps = 31/197 (15%)

Query: 307 SYYNLARSYHSKGDYEKAGLYY------MASVKEINKPHEFIFPYYGLGQVQLKLGDFRS 360
           SY  +   Y+S+G+Y++A   +        SV   N P +    Y  +G V    G +  
Sbjct: 111 SYQKIGIVYYSQGNYKEAECMFKKLLKITLSVLGHNHP-DAAASYNNMGAVYSNQGKYEE 169

Query: 361 ALTNFEKVLEI--------YPDNCETLKALGHIYVQLGQIEKAQELLRKAAKI------- 405
           A++ +EK L+I        +PD   +   +G  Y   G+ EKA  +  K+ KI       
Sbjct: 170 AISMYEKSLKISLPVLGHNHPDVAASYNNMGEAYRHQGKREKAISMYEKSLKIRLSVLGH 229

Query: 406 -DPRDAQAFIDLGELLISSDTGAALDAF----KTARTLLKKAGEEVPIEVL--NNIGVIH 458
             P  A ++ ++G   + SD G   +A     K+ +  L   G   P   +  NNIG ++
Sbjct: 230 NHPDVAASYNNMGA--VYSDQGKHEEAISMYEKSLKITLSIFGHNHPDVAVSYNNIGAVY 287

Query: 459 FEKGEFESAHQSFKDAL 475
             +G++E A   +K +L
Sbjct: 288 SNQGKYEEAISMYKKSL 304



 Score = 46.2 bits (108), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 79/371 (21%), Positives = 152/371 (40%), Gaps = 66/371 (17%)

Query: 93   YTYLGKIETKQREKEEHFILATQYYNKASRIDM--------HEPSTWVGKGQLLLAKGEV 144
            Y  +G++   Q + EE    A   Y K+ +I +        H  +++   G   L  G+ 
Sbjct: 952  YNNMGEVYRHQGKHEE----AISMYEKSLKITLSVLGHNHPHVAASYNNLGNAYLDHGKH 1007

Query: 145  EQASSAF----KIVLEADRDNVPALLGQ----ACVEFNRGRYSDSLEFYKRALQVHPSCP 196
            E+A S +    KI L     N P + G          ++G++ +++  Y+++L++  S  
Sbjct: 1008 EEAISMYEKSLKIRLAVLGHNHPDVAGSYNNLGNAYRHQGKHEEAISMYEKSLKITLSVL 1067

Query: 197  GAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAG------- 249
            G     I      +G +   +  ++ A+ +  ++++  + L+V+D    + AG       
Sbjct: 1068 GHNHPDIAASYNNMGAVYSNQGKYEEAISMYEKSLK--IRLSVLDHNHPDIAGSYNNLGN 1125

Query: 250  IRKGMEKMQRAFEIY---------------PYCAMALNYLANHFFFTGQHFLVEQLTETA 294
              +   K++ A  +Y               P  A++ N L N     G+      + E +
Sbjct: 1126 AHRHQGKLEEAISMYEKSLKIRLSVLDHNHPDVAVSYNNLGNAHRHQGKLEEAISMYEKS 1185

Query: 295  LAVT------NHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK------EINKPHEFI 342
            L +T      NH P  +  Y N+   Y  +G +E+A   Y  S+K      + N PH   
Sbjct: 1186 LKITLSVLDHNH-PHVAAIYNNMGAVYVDQGKHEEAISMYEKSLKITLSVLDHNHPH-VA 1243

Query: 343  FPYYGLGQVQLKLGDFRSALTNFEKVLEI--------YPDNCETLKALGHIYVQLGQIEK 394
              Y  +  V    G    A++ ++K L+I        +PD   +   LG+ Y + G+ E+
Sbjct: 1244 VSYNNIRAVYSNQGKHEEAISMYKKSLKITSSVLGHNHPDVALSYNNLGNAYDKQGKHEE 1303

Query: 395  AQELLRKAAKI 405
            A  +  K+ K+
Sbjct: 1304 AISMYEKSLKV 1314


>gi|344282024|ref|XP_003412775.1| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit isoform
           2 [Loxodonta africana]
          Length = 1036

 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 104/479 (21%), Positives = 189/479 (39%), Gaps = 29/479 (6%)

Query: 142 GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 201
           G+ E A      +   + DN   LL  + + F   R   S  F   A++ +P    A   
Sbjct: 25  GDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYS- 83

Query: 202 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 261
            +G    + GQL +A + ++ AL+L P+ ++  + LA   + A +  G    ++    A 
Sbjct: 84  NLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEG---AVQAYVSAL 140

Query: 262 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 319
           +  P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G
Sbjct: 141 QYNPDLYCVRS--DLGNLLKALGR---LEEAKACYLKAIETQPNFAVAWSNLGCVFNAQG 195

Query: 320 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 379
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++    
Sbjct: 196 EIWLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVH 252

Query: 380 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGA-ALDAFKTARTL 438
             L  +Y + G I+ A +  R+A ++ P    A+ +L   L    + A A D + TA  L
Sbjct: 253 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRL 312

Query: 439 LKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASAS 498
                +      LNN+  I  E+G  E A + ++ AL       +       +   AS  
Sbjct: 313 CPTHADS-----LNNLANIKREQGNIEEAVRLYRKAL------EVFPEFAAAHSNLASVL 361

Query: 499 MLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDY 558
             Q K  +    ++     + +         N+   L+++ D   A   Y   +     +
Sbjct: 362 QQQGKLQEALMHYKEA---IRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAF 418

Query: 559 VDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFR 617
            DA+  LA+I K   N+  +I     ALK+   +P+A   L        DW    E  +
Sbjct: 419 ADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMK 477



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 86/386 (22%), Positives = 164/386 (42%), Gaps = 24/386 (6%)

Query: 93  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 152
           Y+ LG +  ++ + +E    A ++Y  A R+       ++     L+A G++E A  A+ 
Sbjct: 82  YSNLGNVYKERGQLQE----AIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 137

Query: 153 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 210
             L+ + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 138 SALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIETQPNFAVAWS-NLGCVFNAQ 194

Query: 211 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 270
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 195 GEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAAYLRALSLSPNHAVV 251

Query: 271 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 330
              LA  ++  G   L       A+ +  H P    +Y NLA +   KG   +A   Y  
Sbjct: 252 HGNLACVYYEQGLIDLAIDTYRRAIELQPHFPD---AYCNLANALKEKGSVAEAEDCYNT 308

Query: 331 SVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLG 390
           +++      + +     L  ++ + G+   A+  + K LE++P+       L  +  Q G
Sbjct: 309 ALRLCPTHADSL---NNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQG 365

Query: 391 QIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGEEVPIE 449
           ++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +          +
Sbjct: 366 KLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA-----D 420

Query: 450 VLNNIGVIHFEKGEFESAHQSFKDAL 475
             +N+  IH + G    A  S++ AL
Sbjct: 421 AHSNLASIHKDSGNIPEAIASYRTAL 446



 Score = 42.0 bits (97), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 76/347 (21%), Positives = 141/347 (40%), Gaps = 57/347 (16%)

Query: 278 FFFTGQHFLVEQLTETA----LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK 333
              +  HF   +L  +A    LA+  + P  + +Y NL   Y  +G  ++A  +Y  +++
Sbjct: 49  LLLSSIHFQCRRLDRSAHFSTLAIKQN-PLLAEAYSNLGNVYKERGQLQEAIEHYRHALR 107

Query: 334 EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIE 393
              KP +FI  Y  L    +  GD   A+  +   L+  PD       LG++   LG++E
Sbjct: 108 L--KP-DFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLE 164

Query: 394 KAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNN 453
           +A+    KA +  P  A A+ +LG                    +    GE         
Sbjct: 165 EAKACYLKAIETQPNFAVAWSNLG-------------------CVFNAQGEIW------- 198

Query: 454 IGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVID-ASASMLQFKDMQLFHRFE 512
           + + HFEK    +   +F DA     ++ L +   +  + D A A+ L+   +       
Sbjct: 199 LAIHHFEKAV--TLDPNFLDA-----YINLGNVLKEARIFDRAVAAYLRALSLS------ 245

Query: 513 NDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKAR 572
              NH  +  N   V +    L++   DT      YR  +     + DAY  LA   K +
Sbjct: 246 --PNHAVVHGNLACVYYEQG-LIDLAIDT------YRRAIELQPHFPDAYCNLANALKEK 296

Query: 573 NNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAA 619
            ++  + +  N AL++   + ++L+ L +++ +  +  +A   +R A
Sbjct: 297 GSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKA 343


>gi|302339630|ref|YP_003804836.1| hypothetical protein Spirs_3144 [Spirochaeta smaragdinae DSM 11293]
 gi|301636815|gb|ADK82242.1| Tetratricopeptide TPR_2 repeat protein [Spirochaeta smaragdinae DSM
           11293]
          Length = 384

 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 80/319 (25%), Positives = 133/319 (41%), Gaps = 17/319 (5%)

Query: 125 MHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEF 184
           ++E S    +G  LL +    +A   F+ +L+ D  N  AL+G       RG + D++ +
Sbjct: 27  LNEISELSKRGYQLLKENLTGEAERCFEKILQHDEFNNYALVGMGDASRKRGHFRDAITY 86

Query: 185 YKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQA 244
           Y+R LQ H     A+  G+  C   L +   A + ++R LQ D +NV  L  +A      
Sbjct: 87  YQRCLQHHDGNNYAL-FGLADCYKALNKYDDAIKIWERYLQHDEKNVTVLTRVADA---Y 142

Query: 245 NEAAGIRKGMEKMQRAFEI---YPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG 301
            +    R   E   +  EI    PY  + L +L  H+ F  ++    Q  E  L V    
Sbjct: 143 RKVKDFRHSKEVYLQVLEIEPDNPYALIGLGHL--HYDFR-EYEQALQYWERMLQVKKE- 198

Query: 302 PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSA 361
                   +L   +     Y + GL Y     E+ +P  F +  +G+      +     +
Sbjct: 199 SVDIRVLTSLGNCHRKLKTYAQ-GLEYFHKALEL-EPQNF-YALFGMADCYRGMDHHADS 255

Query: 362 LTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLI 421
           L  + ++L++ P N   L   G  Y  +G  + A+E  RKA  I   +   +  LG  LI
Sbjct: 256 LEYWHRILKLDPHNKVILTRAGDAYRCMGDYDNAEEYYRKALNI---EFDVYAILGLALI 312

Query: 422 SSDTGAALDAFKTARTLLK 440
           +   G   +A ++   LLK
Sbjct: 313 NKARGNYEEAIESLYGLLK 331



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 71/310 (22%), Positives = 130/310 (41%), Gaps = 19/310 (6%)

Query: 106 KEEHFILATQYYNKASRIDMHEPSTWV--GKGQLLLAKGEVEQASSAFKIVLEADRDNVP 163
           K  HF  A  YY +   +  H+ + +   G      A  + + A   ++  L+ D  NV 
Sbjct: 76  KRGHFRDAITYYQRC--LQHHDGNNYALFGLADCYKALNKYDDAIKIWERYLQHDEKNVT 133

Query: 164 ALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRA 223
            L   A        +  S E Y + L++ P  P A+ +G+G   Y   +  +A Q ++R 
Sbjct: 134 VLTRVADAYRKVKDFRHSKEVYLQVLEIEPDNPYAL-IGLGHLHYDFREYEQALQYWERM 192

Query: 224 LQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQ 283
           LQ+  E+V+  V  ++ +    +     +G+E   +A E+ P    AL  +A+ +     
Sbjct: 193 LQVKKESVDIRVLTSLGNCH-RKLKTYAQGLEYFHKALELEPQNFYALFGMADCYRGMDH 251

Query: 284 HFLVEQLTETALAVTNHGP---TKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHE 340
           H    +     L +  H     T++        +Y   GDY+ A  YY    K +N   +
Sbjct: 252 HADSLEYWHRILKLDPHNKVILTRA------GDAYRCMGDYDNAEEYYR---KALNIEFD 302

Query: 341 FIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLR 400
            ++   GL  +    G++  A+ +   +L+  P N      +   Y+ LGQ  KA E+L 
Sbjct: 303 -VYAILGLALINKARGNYEEAIESLYGLLKDDPKNHRLYTEIAECYLALGQKYKALEVLG 361

Query: 401 KAAKIDPRDA 410
              ++  R++
Sbjct: 362 DFQRLGIRNS 371


>gi|148682190|gb|EDL14137.1| O-linked N-acetylglucosamine (GlcNAc) transferase
           (UDP-N-acetylglucosamine:polypeptide-N-
           acetylglucosaminyl transferase), isoform CRA_a [Mus
           musculus]
          Length = 1036

 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 104/479 (21%), Positives = 189/479 (39%), Gaps = 29/479 (6%)

Query: 142 GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 201
           G+ E A      +   + DN   LL  + + F   R   S  F   A++ +P    A   
Sbjct: 25  GDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYS- 83

Query: 202 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 261
            +G    + GQL +A + ++ AL+L P+ ++  + LA   + A +  G    ++    A 
Sbjct: 84  NLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEG---AVQAYVSAL 140

Query: 262 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 319
           +  P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G
Sbjct: 141 QYNPDLYCVRS--DLGNLLKALGR---LEEAKACYLKAIETQPNFAVAWSNLGCVFNAQG 195

Query: 320 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 379
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++    
Sbjct: 196 EIWLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVH 252

Query: 380 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGA-ALDAFKTARTL 438
             L  +Y + G I+ A +  R+A ++ P    A+ +L   L    + A A D + TA  L
Sbjct: 253 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRL 312

Query: 439 LKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASAS 498
                +      LNN+  I  E+G  E A + ++ AL       +       +   AS  
Sbjct: 313 CPTHADS-----LNNLANIKREQGNIEEAVRLYRKAL------EVFPEFAAAHSNLASVL 361

Query: 499 MLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDY 558
             Q K  +    ++     + +         N+   L+++ D   A   Y   +     +
Sbjct: 362 QQQGKLQEALMHYKEA---IRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAF 418

Query: 559 VDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFR 617
            DA+  LA+I K   N+  +I     ALK+   +P+A   L        DW    E  +
Sbjct: 419 ADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMK 477



 Score = 64.7 bits (156), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 86/386 (22%), Positives = 164/386 (42%), Gaps = 24/386 (6%)

Query: 93  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 152
           Y+ LG +  ++ + +E    A ++Y  A R+       ++     L+A G++E A  A+ 
Sbjct: 82  YSNLGNVYKERGQLQE----AIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 137

Query: 153 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 210
             L+ + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 138 SALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIETQPNFAVAWS-NLGCVFNAQ 194

Query: 211 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 270
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 195 GEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAAYLRALSLSPNHAVV 251

Query: 271 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 330
              LA  ++  G   L       A+ +  H P    +Y NLA +   KG   +A   Y  
Sbjct: 252 HGNLACVYYEQGLIDLAIDTYRRAIELQPHFPD---AYCNLANALKEKGSVAEAEDCYNT 308

Query: 331 SVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLG 390
           +++      + +     L  ++ + G+   A+  + K LE++P+       L  +  Q G
Sbjct: 309 ALRLCPTHADSL---NNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQG 365

Query: 391 QIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGEEVPIE 449
           ++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +          +
Sbjct: 366 KLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA-----D 420

Query: 450 VLNNIGVIHFEKGEFESAHQSFKDAL 475
             +N+  IH + G    A  S++ AL
Sbjct: 421 AHSNLASIHKDSGNIPEAIASYRTAL 446



 Score = 42.0 bits (97), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 76/347 (21%), Positives = 141/347 (40%), Gaps = 57/347 (16%)

Query: 278 FFFTGQHFLVEQLTETA----LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK 333
              +  HF   +L  +A    LA+  + P  + +Y NL   Y  +G  ++A  +Y  +++
Sbjct: 49  LLLSSIHFQCRRLDRSAHFSTLAIKQN-PLLAEAYSNLGNVYKERGQLQEAIEHYRHALR 107

Query: 334 EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIE 393
              KP +FI  Y  L    +  GD   A+  +   L+  PD       LG++   LG++E
Sbjct: 108 L--KP-DFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLE 164

Query: 394 KAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNN 453
           +A+    KA +  P  A A+ +LG                    +    GE         
Sbjct: 165 EAKACYLKAIETQPNFAVAWSNLG-------------------CVFNAQGEIW------- 198

Query: 454 IGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVID-ASASMLQFKDMQLFHRFE 512
           + + HFEK    +   +F DA     ++ L +   +  + D A A+ L+   +       
Sbjct: 199 LAIHHFEKAV--TLDPNFLDA-----YINLGNVLKEARIFDRAVAAYLRALSLS------ 245

Query: 513 NDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKAR 572
              NH  +  N   V +    L++   DT      YR  +     + DAY  LA   K +
Sbjct: 246 --PNHAVVHGNLACVYYEQG-LIDLAIDT------YRRAIELQPHFPDAYCNLANALKEK 296

Query: 573 NNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAA 619
            ++  + +  N AL++   + ++L+ L +++ +  +  +A   +R A
Sbjct: 297 GSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKA 343


>gi|32307148|ref|NP_858058.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
           110 kDa subunit isoform 1 [Homo sapiens]
 gi|397498834|ref|XP_003820179.1| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit isoform
           1 [Pan paniscus]
 gi|426396356|ref|XP_004064413.1| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit isoform
           1 [Gorilla gorilla gorilla]
 gi|68067509|sp|O15294.3|OGT1_HUMAN RecName: Full=UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit;
           AltName: Full=O-GlcNAc transferase subunit p110;
           AltName: Full=O-linked N-acetylglucosamine transferase
           110 kDa subunit; Short=OGT
 gi|18250915|emb|CAC86128.1| UDP-N-acetylglucosamine: polypeptide-N-acetylglucosaminyl
           transferase [Homo sapiens]
 gi|23315618|gb|AAH38180.1| O-linked N-acetylglucosamine (GlcNAc) transferase
           (UDP-N-acetylglucosamine:polypeptide-N-
           acetylglucosaminyl transferase) [Homo sapiens]
 gi|30268372|emb|CAD89970.1| hypothetical protein [Homo sapiens]
 gi|119625691|gb|EAX05286.1| O-linked N-acetylglucosamine (GlcNAc) transferase
           (UDP-N-acetylglucosamine:polypeptide-N-
           acetylglucosaminyl transferase), isoform CRA_b [Homo
           sapiens]
 gi|410227760|gb|JAA11099.1| O-linked N-acetylglucosamine (GlcNAc) transferase
           (UDP-N-acetylglucosamine:polypeptide-N-
           acetylglucosaminyl transferase) [Pan troglodytes]
 gi|410227764|gb|JAA11101.1| O-linked N-acetylglucosamine (GlcNAc) transferase
           (UDP-N-acetylglucosamine:polypeptide-N-
           acetylglucosaminyl transferase) [Pan troglodytes]
 gi|410257116|gb|JAA16525.1| O-linked N-acetylglucosamine (GlcNAc) transferase
           (UDP-N-acetylglucosamine:polypeptide-N-
           acetylglucosaminyl transferase) [Pan troglodytes]
 gi|410342219|gb|JAA40056.1| O-linked N-acetylglucosamine (GlcNAc) transferase
           (UDP-N-acetylglucosamine:polypeptide-N-
           acetylglucosaminyl transferase) [Pan troglodytes]
          Length = 1046

 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 104/479 (21%), Positives = 189/479 (39%), Gaps = 29/479 (6%)

Query: 142 GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 201
           G+ E A      +   + DN   LL  + + F   R   S  F   A++ +P    A   
Sbjct: 35  GDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYS- 93

Query: 202 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 261
            +G    + GQL +A + ++ AL+L P+ ++  + LA   + A +  G    ++    A 
Sbjct: 94  NLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEG---AVQAYVSAL 150

Query: 262 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 319
           +  P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G
Sbjct: 151 QYNPDLYCVRS--DLGNLLKALGR---LEEAKACYLKAIETQPNFAVAWSNLGCVFNAQG 205

Query: 320 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 379
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++    
Sbjct: 206 EIWLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVH 262

Query: 380 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGA-ALDAFKTARTL 438
             L  +Y + G I+ A +  R+A ++ P    A+ +L   L    + A A D + TA  L
Sbjct: 263 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRL 322

Query: 439 LKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASAS 498
                +      LNN+  I  E+G  E A + ++ AL       +       +   AS  
Sbjct: 323 CPTHADS-----LNNLANIKREQGNIEEAVRLYRKAL------EVFPEFAAAHSNLASVL 371

Query: 499 MLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDY 558
             Q K  +    ++     + +         N+   L+++ D   A   Y   +     +
Sbjct: 372 QQQGKLQEALMHYKEA---IRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAF 428

Query: 559 VDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFR 617
            DA+  LA+I K   N+  +I     ALK+   +P+A   L        DW    E  +
Sbjct: 429 ADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMK 487



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 86/386 (22%), Positives = 164/386 (42%), Gaps = 24/386 (6%)

Query: 93  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 152
           Y+ LG +  ++ + +E    A ++Y  A R+       ++     L+A G++E A  A+ 
Sbjct: 92  YSNLGNVYKERGQLQE----AIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 147

Query: 153 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 210
             L+ + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 148 SALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIETQPNFAVAWS-NLGCVFNAQ 204

Query: 211 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 270
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 205 GEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAAYLRALSLSPNHAVV 261

Query: 271 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 330
              LA  ++  G   L       A+ +  H P    +Y NLA +   KG   +A   Y  
Sbjct: 262 HGNLACVYYEQGLIDLAIDTYRRAIELQPHFPD---AYCNLANALKEKGSVAEAEDCYNT 318

Query: 331 SVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLG 390
           +++      + +     L  ++ + G+   A+  + K LE++P+       L  +  Q G
Sbjct: 319 ALRLCPTHADSL---NNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQG 375

Query: 391 QIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGEEVPIE 449
           ++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +          +
Sbjct: 376 KLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA-----D 430

Query: 450 VLNNIGVIHFEKGEFESAHQSFKDAL 475
             +N+  IH + G    A  S++ AL
Sbjct: 431 AHSNLASIHKDSGNIPEAIASYRTAL 456



 Score = 42.0 bits (97), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 76/347 (21%), Positives = 141/347 (40%), Gaps = 57/347 (16%)

Query: 278 FFFTGQHFLVEQLTETA----LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK 333
              +  HF   +L  +A    LA+  + P  + +Y NL   Y  +G  ++A  +Y  +++
Sbjct: 59  LLLSSIHFQCRRLDRSAHFSTLAIKQN-PLLAEAYSNLGNVYKERGQLQEAIEHYRHALR 117

Query: 334 EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIE 393
              KP +FI  Y  L    +  GD   A+  +   L+  PD       LG++   LG++E
Sbjct: 118 L--KP-DFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLE 174

Query: 394 KAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNN 453
           +A+    KA +  P  A A+ +LG                    +    GE         
Sbjct: 175 EAKACYLKAIETQPNFAVAWSNLG-------------------CVFNAQGEIW------- 208

Query: 454 IGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVID-ASASMLQFKDMQLFHRFE 512
           + + HFEK    +   +F DA     ++ L +   +  + D A A+ L+   +       
Sbjct: 209 LAIHHFEKAV--TLDPNFLDA-----YINLGNVLKEARIFDRAVAAYLRALSLS------ 255

Query: 513 NDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKAR 572
              NH  +  N   V +    L++   DT      YR  +     + DAY  LA   K +
Sbjct: 256 --PNHAVVHGNLACVYYEQG-LIDLAIDT------YRRAIELQPHFPDAYCNLANALKEK 306

Query: 573 NNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAA 619
            ++  + +  N AL++   + ++L+ L +++ +  +  +A   +R A
Sbjct: 307 GSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKA 353


>gi|395858889|ref|XP_003801787.1| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit isoform
           1 [Otolemur garnettii]
          Length = 1046

 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 104/479 (21%), Positives = 189/479 (39%), Gaps = 29/479 (6%)

Query: 142 GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 201
           G+ E A      +   + DN   LL  + + F   R   S  F   A++ +P    A   
Sbjct: 35  GDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYS- 93

Query: 202 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 261
            +G    + GQL +A + ++ AL+L P+ ++  + LA   + A +  G    ++    A 
Sbjct: 94  NLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEG---AVQAYVSAL 150

Query: 262 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 319
           +  P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G
Sbjct: 151 QYNPDLYCVRS--DLGNLLKALGR---LEEAKACYLKAIETQPNFAVAWSNLGCVFNAQG 205

Query: 320 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 379
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++    
Sbjct: 206 EIWLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVH 262

Query: 380 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGA-ALDAFKTARTL 438
             L  +Y + G I+ A +  R+A ++ P    A+ +L   L    + A A D + TA  L
Sbjct: 263 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRL 322

Query: 439 LKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASAS 498
                +      LNN+  I  E+G  E A + ++ AL       +       +   AS  
Sbjct: 323 CPTHADS-----LNNLANIKREQGNIEEAVRLYRKAL------EVFPEFAAAHSNLASVL 371

Query: 499 MLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDY 558
             Q K  +    ++     + +         N+   L+++ D   A   Y   +     +
Sbjct: 372 QQQGKLQEALMHYKEA---IRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAF 428

Query: 559 VDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFR 617
            DA+  LA+I K   N+  +I     ALK+   +P+A   L        DW    E  +
Sbjct: 429 ADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMK 487



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 86/386 (22%), Positives = 164/386 (42%), Gaps = 24/386 (6%)

Query: 93  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 152
           Y+ LG +  ++ + +E    A ++Y  A R+       ++     L+A G++E A  A+ 
Sbjct: 92  YSNLGNVYKERGQLQE----AIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 147

Query: 153 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 210
             L+ + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 148 SALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIETQPNFAVAWS-NLGCVFNAQ 204

Query: 211 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 270
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 205 GEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAAYLRALSLSPNHAVV 261

Query: 271 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 330
              LA  ++  G   L       A+ +  H P    +Y NLA +   KG   +A   Y  
Sbjct: 262 HGNLACVYYEQGLIDLAIDTYRRAIELQPHFPD---AYCNLANALKEKGSVAEAEDCYNT 318

Query: 331 SVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLG 390
           +++      + +     L  ++ + G+   A+  + K LE++P+       L  +  Q G
Sbjct: 319 ALRLCPTHADSL---NNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQG 375

Query: 391 QIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGEEVPIE 449
           ++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +          +
Sbjct: 376 KLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA-----D 430

Query: 450 VLNNIGVIHFEKGEFESAHQSFKDAL 475
             +N+  IH + G    A  S++ AL
Sbjct: 431 AHSNLASIHKDSGNIPEAIASYRTAL 456



 Score = 42.0 bits (97), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 76/347 (21%), Positives = 140/347 (40%), Gaps = 57/347 (16%)

Query: 278 FFFTGQHFLVEQLTETA----LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK 333
              +  HF   +L  +A    LA+    P  + +Y NL   Y  +G  ++A  +Y  +++
Sbjct: 59  LLLSSIHFQCRRLDRSAHFSTLAI-KQNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALR 117

Query: 334 EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIE 393
              KP +FI  Y  L    +  GD   A+  +   L+  PD       LG++   LG++E
Sbjct: 118 L--KP-DFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLE 174

Query: 394 KAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNN 453
           +A+    KA +  P  A A+ +LG                    +    GE         
Sbjct: 175 EAKACYLKAIETQPNFAVAWSNLG-------------------CVFNAQGEIW------- 208

Query: 454 IGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVID-ASASMLQFKDMQLFHRFE 512
           + + HFEK    +   +F DA     ++ L +   +  + D A A+ L+   +       
Sbjct: 209 LAIHHFEKAV--TLDPNFLDA-----YINLGNVLKEARIFDRAVAAYLRALSLS------ 255

Query: 513 NDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKAR 572
              NH  +  N   V +    L++   DT      YR  +     + DAY  LA   K +
Sbjct: 256 --PNHAVVHGNLACVYYEQG-LIDLAIDT------YRRAIELQPHFPDAYCNLANALKEK 306

Query: 573 NNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAA 619
            ++  + +  N AL++   + ++L+ L +++ +  +  +A   +R A
Sbjct: 307 GSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKA 353


>gi|344282022|ref|XP_003412774.1| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit isoform
           1 [Loxodonta africana]
          Length = 1046

 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 104/479 (21%), Positives = 189/479 (39%), Gaps = 29/479 (6%)

Query: 142 GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 201
           G+ E A      +   + DN   LL  + + F   R   S  F   A++ +P    A   
Sbjct: 35  GDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYS- 93

Query: 202 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 261
            +G    + GQL +A + ++ AL+L P+ ++  + LA   + A +  G    ++    A 
Sbjct: 94  NLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEG---AVQAYVSAL 150

Query: 262 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 319
           +  P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G
Sbjct: 151 QYNPDLYCVRS--DLGNLLKALGR---LEEAKACYLKAIETQPNFAVAWSNLGCVFNAQG 205

Query: 320 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 379
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++    
Sbjct: 206 EIWLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVH 262

Query: 380 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGA-ALDAFKTARTL 438
             L  +Y + G I+ A +  R+A ++ P    A+ +L   L    + A A D + TA  L
Sbjct: 263 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRL 322

Query: 439 LKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASAS 498
                +      LNN+  I  E+G  E A + ++ AL       +       +   AS  
Sbjct: 323 CPTHADS-----LNNLANIKREQGNIEEAVRLYRKAL------EVFPEFAAAHSNLASVL 371

Query: 499 MLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDY 558
             Q K  +    ++     + +         N+   L+++ D   A   Y   +     +
Sbjct: 372 QQQGKLQEALMHYKEA---IRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAF 428

Query: 559 VDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFR 617
            DA+  LA+I K   N+  +I     ALK+   +P+A   L        DW    E  +
Sbjct: 429 ADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMK 487



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 87/391 (22%), Positives = 165/391 (42%), Gaps = 34/391 (8%)

Query: 93  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 152
           Y+ LG +  ++ + +E    A ++Y  A R+       ++     L+A G++E A  A+ 
Sbjct: 92  YSNLGNVYKERGQLQE----AIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 147

Query: 153 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 210
             L+ + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 148 SALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIETQPNFAVAWS-NLGCVFNAQ 204

Query: 211 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 270
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 205 GEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAAYLRALSLSPNHAVV 261

Query: 271 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 330
              LA  ++  G   L       A+ +  H P    +Y NLA +   KG   +A   Y  
Sbjct: 262 HGNLACVYYEQGLIDLAIDTYRRAIELQPHFPD---AYCNLANALKEKGSVAEAEDCYNT 318

Query: 331 SVKEINKPHEFIFPYYG-----LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 385
           +++        + P +      L  ++ + G+   A+  + K LE++P+       L  +
Sbjct: 319 ALR--------LCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASV 370

Query: 386 YVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGE 444
             Q G++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +      
Sbjct: 371 LQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA- 429

Query: 445 EVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
               +  +N+  IH + G    A  S++ AL
Sbjct: 430 ----DAHSNLASIHKDSGNIPEAIASYRTAL 456



 Score = 42.0 bits (97), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 76/347 (21%), Positives = 141/347 (40%), Gaps = 57/347 (16%)

Query: 278 FFFTGQHFLVEQLTETA----LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK 333
              +  HF   +L  +A    LA+  + P  + +Y NL   Y  +G  ++A  +Y  +++
Sbjct: 59  LLLSSIHFQCRRLDRSAHFSTLAIKQN-PLLAEAYSNLGNVYKERGQLQEAIEHYRHALR 117

Query: 334 EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIE 393
              KP +FI  Y  L    +  GD   A+  +   L+  PD       LG++   LG++E
Sbjct: 118 L--KP-DFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLE 174

Query: 394 KAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNN 453
           +A+    KA +  P  A A+ +LG                    +    GE         
Sbjct: 175 EAKACYLKAIETQPNFAVAWSNLG-------------------CVFNAQGEIW------- 208

Query: 454 IGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVID-ASASMLQFKDMQLFHRFE 512
           + + HFEK    +   +F DA     ++ L +   +  + D A A+ L+   +       
Sbjct: 209 LAIHHFEKAV--TLDPNFLDA-----YINLGNVLKEARIFDRAVAAYLRALSLS------ 255

Query: 513 NDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKAR 572
              NH  +  N   V +    L++   DT      YR  +     + DAY  LA   K +
Sbjct: 256 --PNHAVVHGNLACVYYEQG-LIDLAIDT------YRRAIELQPHFPDAYCNLANALKEK 306

Query: 573 NNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAA 619
            ++  + +  N AL++   + ++L+ L +++ +  +  +A   +R A
Sbjct: 307 GSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKA 353


>gi|195122698|ref|XP_002005848.1| GI18858 [Drosophila mojavensis]
 gi|193910916|gb|EDW09783.1| GI18858 [Drosophila mojavensis]
          Length = 1052

 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 87/388 (22%), Positives = 163/388 (42%), Gaps = 28/388 (7%)

Query: 93  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 152
           Y+ LG +  ++ + +E    A   Y +A R+       ++     L+A  ++E A  A+ 
Sbjct: 113 YSNLGNVYKERGQLQE----ALDNYRRAVRLKPDFIDGYINLAAALVAARDMESAVQAYI 168

Query: 153 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPG--AIRLGIGLCRY 208
             L+ + D   V + LG        GR  ++   Y +A++   +CPG       +G    
Sbjct: 169 TALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIE---TCPGFAVAWSNLGCVFN 223

Query: 209 KLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCA 268
             G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A
Sbjct: 224 AQGEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAAYLRALNLSPNNA 280

Query: 269 MALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYY 328
           +    LA  ++  G   L++   +T        P    +Y NLA +   KG  + A   Y
Sbjct: 281 VVHGNLACVYYEQG---LIDLAIDTYRRAIELQPNFPDAYCNLANALKEKGQVKDAEECY 337

Query: 329 MASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQ 388
             +++  +   + +     L  ++ + G    A   + K LE++PD       L  +  Q
Sbjct: 338 NTALRLCSNHADSL---NNLANIKREQGFIEEATRLYLKALEVFPDFAAAHSNLASVLQQ 394

Query: 389 LGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGEEVP 447
            G++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +         
Sbjct: 395 QGKLKEALMHYKEAIRIQPTFADAYSNMGNTLKELQDVSGALQCYTRAIQINPAFA---- 450

Query: 448 IEVLNNIGVIHFEKGEFESAHQSFKDAL 475
            +  +N+  IH + G    A QS++ AL
Sbjct: 451 -DAHSNLASIHKDSGNIPEAIQSYRTAL 477



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 100/455 (21%), Positives = 186/455 (40%), Gaps = 27/455 (5%)

Query: 158 DRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKAR 217
           D  N   LL  + + F   R   S +F   A++ +P    A    +G    + GQL +A 
Sbjct: 72  DSTNTGVLLLLSSIHFQCRRLDKSAQFSTLAIKQNPVLAEAYS-NLGNVYKERGQLQEAL 130

Query: 218 QAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYP--YCAMALNYLA 275
             ++RA++L P+ ++  + LA   + A +   +   ++    A +  P  YC  +   L 
Sbjct: 131 DNYRRAVRLKPDFIDGYINLAAALVAARD---MESAVQAYITALQYNPDLYCVRS--DLG 185

Query: 276 NHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEI 335
           N     G+   +E+     L      P  + ++ NL   ++++G+   A  ++    K +
Sbjct: 186 NLLKALGR---LEEAKACYLKAIETCPGFAVAWSNLGCVFNAQGEIWLAIHHFE---KAV 239

Query: 336 NKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKA 395
                F+  Y  LG V  +   F  A+  + + L + P+N      L  +Y + G I+ A
Sbjct: 240 TLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALNLSPNNAVVHGNLACVYYEQGLIDLA 299

Query: 396 QELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIG 455
            +  R+A ++ P    A+ +L   L   + G   DA +   T L+        + LNN+ 
Sbjct: 300 IDTYRRAIELQPNFPDAYCNLANAL--KEKGQVKDAEECYNTALRLCSNHA--DSLNNLA 355

Query: 456 VIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDG 515
            I  E+G  E A + +  AL   ++     + +        AS+LQ +  +L     +  
Sbjct: 356 NIKREQGFIEEATRLYLKAL--EVFPDFAAAHSNL------ASVLQ-QQGKLKEALMHYK 406

Query: 516 NHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNL 575
             + +         N+   L+++ D   A   Y   +     + DA+  LA+I K   N+
Sbjct: 407 EAIRIQPTFADAYSNMGNTLKELQDVSGALQCYTRAIQINPAFADAHSNLASIHKDSGNI 466

Query: 576 QLSIELVNEALKVNGKYPNALSMLGDLELKNDDWV 610
             +I+    ALK+   +P+A   L        DW 
Sbjct: 467 PEAIQSYRTALKLKPDFPDAYCNLAHCLQIVCDWT 501



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 73/338 (21%), Positives = 134/338 (39%), Gaps = 48/338 (14%)

Query: 83  IAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKG 142
           I       V ++ LG +   Q E      LA  ++ KA  +D +    ++  G +L    
Sbjct: 205 IETCPGFAVAWSNLGCVFNAQGE----IWLAIHHFEKAVTLDPNFLDAYINLGNVLKEAR 260

Query: 143 EVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLG 202
             ++A +A+   L    +N       ACV + +G    +++ Y+RA+++ P+ P A    
Sbjct: 261 IFDRAVAAYLRALNLSPNNAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPNFPDAY-CN 319

Query: 203 IGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFE 262
           +     + GQ+  A + +  AL+L   + ++L  LA +     E   I +      +A E
Sbjct: 320 LANALKEKGQVKDAEECYNTALRLCSNHADSLNNLANIK---REQGFIEEATRLYLKALE 376

Query: 263 IYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYE 322
           ++P  A A                                   HS  NLA     +G  +
Sbjct: 377 VFPDFAAA-----------------------------------HS--NLASVLQQQGKLK 399

Query: 323 KAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKAL 382
           +A ++Y  +++   +P  F   Y  +G    +L D   AL  + + ++I P   +    L
Sbjct: 400 EALMHYKEAIRI--QP-TFADAYSNMGNTLKELQDVSGALQCYTRAIQINPAFADAHSNL 456

Query: 383 GHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 420
             I+   G I +A +  R A K+ P    A+ +L   L
Sbjct: 457 ASIHKDSGNIPEAIQSYRTALKLKPDFPDAYCNLAHCL 494


>gi|390566665|ref|ZP_10247021.1| TPR repeat-containing protein [Burkholderia terrae BS001]
 gi|389941374|gb|EIN03147.1| TPR repeat-containing protein [Burkholderia terrae BS001]
          Length = 615

 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 81/329 (24%), Positives = 142/329 (43%), Gaps = 24/329 (7%)

Query: 142 GEVEQASSAFKIVLEADRDNVPAL--LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAI 199
           G ++ A   ++  LE D  +V AL  LG  C    +G++ ++ +  +RA  + P    A+
Sbjct: 15  GRLDDAERDYRATLELDPVHVDALHLLGVLC--HQQGQHEEAADLVRRAADLRPQD-AAL 71

Query: 200 RLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRK-GMEKMQ 258
           +L +G     LG+L +A + F+ AL L P    A   L      A   AG  +  ++  Q
Sbjct: 72  QLNLGNALKALGRLDQAIERFRNALTLAPTFPMAHYNLG----NAYALAGRHEDAVDAFQ 127

Query: 259 RAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSK 318
           ++  + P  A +   L N     G+H         AL +    P  + ++ N+  + ++ 
Sbjct: 128 KSLRLQPLDASSHVNLGNALHALGRHREAVDSFRRALELR---PGHAGAHNNIGMALNAL 184

Query: 319 GDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCET 378
           G   +A  ++ A+ K   +   F+   + LG      G    A+  FE VL +  +    
Sbjct: 185 GSAREAIAHFRAAFKIEPR---FVAARFNLGNTLDATGQHHEAVAEFEAVLTLQTNLPPA 241

Query: 379 LKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTL 438
           L  LG+    LG+ E+A+    +A  +DP  A A++ LG          AL A+  A   
Sbjct: 242 LFGLGNALASLGRHEEARPRFERAVGLDPNFALAWLSLGA------AHHALGAYDAALRA 295

Query: 439 LKKAGEEVPIEVLN--NIGVIHFEKGEFE 465
             +A    P + +   N GV    +G+F+
Sbjct: 296 FDQALRLRPDQAIAHMNRGVTLLTRGDFK 324



 Score = 42.4 bits (98), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 60/121 (49%), Gaps = 6/121 (4%)

Query: 356 GDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFID 415
           G    A  ++   LE+ P + + L  LG +  Q GQ E+A +L+R+AA + P+DA   ++
Sbjct: 15  GRLDDAERDYRATLELDPVHVDALHLLGVLCHQQGQHEEAADLVRRAADLRPQDAALQLN 74

Query: 416 LGELLIS-SDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDA 474
           LG  L +      A++ F+ A TL        P+    N+G  +   G  E A  +F+ +
Sbjct: 75  LGNALKALGRLDQAIERFRNALTL----APTFPM-AHYNLGNAYALAGRHEDAVDAFQKS 129

Query: 475 L 475
           L
Sbjct: 130 L 130



 Score = 41.2 bits (95), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 46/176 (26%), Positives = 76/176 (43%), Gaps = 29/176 (16%)

Query: 56  VEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQ 115
           V+ FR+ LE             +R       N +G+    LG      RE   HF  A +
Sbjct: 157 VDSFRRALE-------------LRPGHAGAHNNIGMALNALGSA----REAIAHFRAAFK 199

Query: 116 YYNK--ASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEF 173
              +  A+R ++         G  L A G+  +A + F+ VL    +  PAL G      
Sbjct: 200 IEPRFVAARFNL---------GNTLDATGQHHEAVAEFEAVLTLQTNLPPALFGLGNALA 250

Query: 174 NRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPE 229
           + GR+ ++   ++RA+ + P+   A  L +G   + LG    A +AF +AL+L P+
Sbjct: 251 SLGRHEEARPRFERAVGLDPNFALAW-LSLGAAHHALGAYDAALRAFDQALRLRPD 305


>gi|440901878|gb|ELR52744.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
           110 kDa subunit, partial [Bos grunniens mutus]
          Length = 1037

 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 104/479 (21%), Positives = 189/479 (39%), Gaps = 29/479 (6%)

Query: 142 GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 201
           G+ E A      +   + DN   LL  + + F   R   S  F   A++ +P    A   
Sbjct: 26  GDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYS- 84

Query: 202 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 261
            +G    + GQL +A + ++ AL+L P+ ++  + LA   + A +  G    ++    A 
Sbjct: 85  NLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEG---AVQAYVSAL 141

Query: 262 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 319
           +  P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G
Sbjct: 142 QYNPDLYCVRS--DLGNLLKALGR---LEEAKACYLKAIETQPNFAVAWSNLGCVFNAQG 196

Query: 320 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 379
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++    
Sbjct: 197 EIWLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVH 253

Query: 380 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGA-ALDAFKTARTL 438
             L  +Y + G I+ A +  R+A ++ P    A+ +L   L    + A A D + TA  L
Sbjct: 254 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRL 313

Query: 439 LKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASAS 498
                +      LNN+  I  E+G  E A + ++ AL       +       +   AS  
Sbjct: 314 CPTHADS-----LNNLANIKREQGNIEEAVRLYRKAL------EVFPEFAAAHSNLASVL 362

Query: 499 MLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDY 558
             Q K  +    ++     + +         N+   L+++ D   A   Y   +     +
Sbjct: 363 QQQGKLQEALMHYKEA---IRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAF 419

Query: 559 VDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFR 617
            DA+  LA+I K   N+  +I     ALK+   +P+A   L        DW    E  +
Sbjct: 420 ADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMK 478



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 86/386 (22%), Positives = 164/386 (42%), Gaps = 24/386 (6%)

Query: 93  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 152
           Y+ LG +  ++ + +E    A ++Y  A R+       ++     L+A G++E A  A+ 
Sbjct: 83  YSNLGNVYKERGQLQE----AIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 138

Query: 153 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 210
             L+ + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 139 SALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIETQPNFAVAWS-NLGCVFNAQ 195

Query: 211 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 270
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 196 GEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAAYLRALSLSPNHAVV 252

Query: 271 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 330
              LA  ++  G   L       A+ +  H P    +Y NLA +   KG   +A   Y  
Sbjct: 253 HGNLACVYYEQGLIDLAIDTYRRAIELQPHFPD---AYCNLANALKEKGSVAEAEDCYNT 309

Query: 331 SVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLG 390
           +++      + +     L  ++ + G+   A+  + K LE++P+       L  +  Q G
Sbjct: 310 ALRLCPTHADSL---NNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQG 366

Query: 391 QIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGEEVPIE 449
           ++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +          +
Sbjct: 367 KLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA-----D 421

Query: 450 VLNNIGVIHFEKGEFESAHQSFKDAL 475
             +N+  IH + G    A  S++ AL
Sbjct: 422 AHSNLASIHKDSGNIPEAIASYRTAL 447



 Score = 42.0 bits (97), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 76/347 (21%), Positives = 141/347 (40%), Gaps = 57/347 (16%)

Query: 278 FFFTGQHFLVEQLTETA----LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK 333
              +  HF   +L  +A    LA+  + P  + +Y NL   Y  +G  ++A  +Y  +++
Sbjct: 50  LLLSSIHFQCRRLDRSAHFSTLAIKQN-PLLAEAYSNLGNVYKERGQLQEAIEHYRHALR 108

Query: 334 EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIE 393
              KP +FI  Y  L    +  GD   A+  +   L+  PD       LG++   LG++E
Sbjct: 109 L--KP-DFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLE 165

Query: 394 KAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNN 453
           +A+    KA +  P  A A+ +LG                    +    GE         
Sbjct: 166 EAKACYLKAIETQPNFAVAWSNLG-------------------CVFNAQGEIW------- 199

Query: 454 IGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVID-ASASMLQFKDMQLFHRFE 512
           + + HFEK    +   +F DA     ++ L +   +  + D A A+ L+   +       
Sbjct: 200 LAIHHFEKAV--TLDPNFLDA-----YINLGNVLKEARIFDRAVAAYLRALSLS------ 246

Query: 513 NDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKAR 572
              NH  +  N   V +    L++   DT      YR  +     + DAY  LA   K +
Sbjct: 247 --PNHAVVHGNLACVYYEQG-LIDLAIDT------YRRAIELQPHFPDAYCNLANALKEK 297

Query: 573 NNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAA 619
            ++  + +  N AL++   + ++L+ L +++ +  +  +A   +R A
Sbjct: 298 GSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKA 344


>gi|301791307|ref|XP_002930622.1| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit-like
           isoform 1 [Ailuropoda melanoleuca]
 gi|410988812|ref|XP_004000671.1| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit isoform
           2 [Felis catus]
          Length = 1036

 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 104/479 (21%), Positives = 189/479 (39%), Gaps = 29/479 (6%)

Query: 142 GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 201
           G+ E A      +   + DN   LL  + + F   R   S  F   A++ +P    A   
Sbjct: 25  GDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYS- 83

Query: 202 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 261
            +G    + GQL +A + ++ AL+L P+ ++  + LA   + A +  G    ++    A 
Sbjct: 84  NLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEG---AVQAYVSAL 140

Query: 262 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 319
           +  P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G
Sbjct: 141 QYNPDLYCVRS--DLGNLLKALGR---LEEAKACYLKAIETQPNFAVAWSNLGCVFNAQG 195

Query: 320 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 379
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++    
Sbjct: 196 EIWLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVH 252

Query: 380 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGA-ALDAFKTARTL 438
             L  +Y + G I+ A +  R+A ++ P    A+ +L   L    + A A D + TA  L
Sbjct: 253 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRL 312

Query: 439 LKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASAS 498
                +      LNN+  I  E+G  E A + ++ AL       +       +   AS  
Sbjct: 313 CPTHADS-----LNNLANIKREQGNIEEAVRLYRKAL------EVFPEFAAAHSNLASVL 361

Query: 499 MLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDY 558
             Q K  +    ++     + +         N+   L+++ D   A   Y   +     +
Sbjct: 362 QQQGKLQEALMHYKEA---IRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAF 418

Query: 559 VDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFR 617
            DA+  LA+I K   N+  +I     ALK+   +P+A   L        DW    E  +
Sbjct: 419 ADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMK 477



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 86/386 (22%), Positives = 164/386 (42%), Gaps = 24/386 (6%)

Query: 93  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 152
           Y+ LG +  ++ + +E    A ++Y  A R+       ++     L+A G++E A  A+ 
Sbjct: 82  YSNLGNVYKERGQLQE----AIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 137

Query: 153 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 210
             L+ + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 138 SALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIETQPNFAVAWS-NLGCVFNAQ 194

Query: 211 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 270
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 195 GEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAAYLRALSLSPNHAVV 251

Query: 271 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 330
              LA  ++  G   L       A+ +  H P    +Y NLA +   KG   +A   Y  
Sbjct: 252 HGNLACVYYEQGLIDLAIDTYRRAIELQPHFPD---AYCNLANALKEKGSVAEAEDCYNT 308

Query: 331 SVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLG 390
           +++      + +     L  ++ + G+   A+  + K LE++P+       L  +  Q G
Sbjct: 309 ALRLCPTHADSL---NNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQG 365

Query: 391 QIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGEEVPIE 449
           ++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +          +
Sbjct: 366 KLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA-----D 420

Query: 450 VLNNIGVIHFEKGEFESAHQSFKDAL 475
             +N+  IH + G    A  S++ AL
Sbjct: 421 AHSNLASIHKDSGNIPEAIASYRTAL 446



 Score = 42.0 bits (97), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 76/347 (21%), Positives = 141/347 (40%), Gaps = 57/347 (16%)

Query: 278 FFFTGQHFLVEQLTETA----LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK 333
              +  HF   +L  +A    LA+  + P  + +Y NL   Y  +G  ++A  +Y  +++
Sbjct: 49  LLLSSIHFQCRRLDRSAHFSTLAIKQN-PLLAEAYSNLGNVYKERGQLQEAIEHYRHALR 107

Query: 334 EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIE 393
              KP +FI  Y  L    +  GD   A+  +   L+  PD       LG++   LG++E
Sbjct: 108 L--KP-DFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLE 164

Query: 394 KAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNN 453
           +A+    KA +  P  A A+ +LG                    +    GE         
Sbjct: 165 EAKACYLKAIETQPNFAVAWSNLG-------------------CVFNAQGEIW------- 198

Query: 454 IGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVID-ASASMLQFKDMQLFHRFE 512
           + + HFEK    +   +F DA     ++ L +   +  + D A A+ L+   +       
Sbjct: 199 LAIHHFEKAV--TLDPNFLDA-----YINLGNVLKEARIFDRAVAAYLRALSLS------ 245

Query: 513 NDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKAR 572
              NH  +  N   V +    L++   DT      YR  +     + DAY  LA   K +
Sbjct: 246 --PNHAVVHGNLACVYYEQG-LIDLAIDT------YRRAIELQPHFPDAYCNLANALKEK 296

Query: 573 NNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAA 619
            ++  + +  N AL++   + ++L+ L +++ +  +  +A   +R A
Sbjct: 297 GSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKA 343


>gi|403305181|ref|XP_003943148.1| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit isoform
           1 [Saimiri boliviensis boliviensis]
          Length = 1046

 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 104/479 (21%), Positives = 189/479 (39%), Gaps = 29/479 (6%)

Query: 142 GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 201
           G+ E A      +   + DN   LL  + + F   R   S  F   A++ +P    A   
Sbjct: 35  GDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYS- 93

Query: 202 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 261
            +G    + GQL +A + ++ AL+L P+ ++  + LA   + A +  G    ++    A 
Sbjct: 94  NLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEG---AVQAYVSAL 150

Query: 262 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 319
           +  P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G
Sbjct: 151 QYNPDLYCVRS--DLGNLLKALGR---LEEAKACYLKAIETQPNFAVAWSNLGCVFNAQG 205

Query: 320 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 379
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++    
Sbjct: 206 EIWLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVH 262

Query: 380 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGA-ALDAFKTARTL 438
             L  +Y + G I+ A +  R+A ++ P    A+ +L   L    + A A D + TA  L
Sbjct: 263 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRL 322

Query: 439 LKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASAS 498
                +      LNN+  I  E+G  E A + ++ AL       +       +   AS  
Sbjct: 323 CPTHADS-----LNNLANIKREQGNIEEAVRLYRKAL------EVFPEFAAAHSNLASVL 371

Query: 499 MLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDY 558
             Q K  +    ++     + +         N+   L+++ D   A   Y   +     +
Sbjct: 372 QQQGKLQEALMHYKEA---IRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAF 428

Query: 559 VDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFR 617
            DA+  LA+I K   N+  +I     ALK+   +P+A   L        DW    E  +
Sbjct: 429 ADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMK 487



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 86/386 (22%), Positives = 164/386 (42%), Gaps = 24/386 (6%)

Query: 93  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 152
           Y+ LG +  ++ + +E    A ++Y  A R+       ++     L+A G++E A  A+ 
Sbjct: 92  YSNLGNVYKERGQLQE----AIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 147

Query: 153 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 210
             L+ + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 148 SALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIETQPNFAVAWS-NLGCVFNAQ 204

Query: 211 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 270
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 205 GEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAAYLRALSLSPNHAVV 261

Query: 271 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 330
              LA  ++  G   L       A+ +  H P    +Y NLA +   KG   +A   Y  
Sbjct: 262 HGNLACVYYEQGLIDLAIDTYRRAIELQPHFPD---AYCNLANALKEKGSVAEAEDCYNT 318

Query: 331 SVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLG 390
           +++      + +     L  ++ + G+   A+  + K LE++P+       L  +  Q G
Sbjct: 319 ALRLCPTHADSL---NNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQG 375

Query: 391 QIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGEEVPIE 449
           ++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +          +
Sbjct: 376 KLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA-----D 430

Query: 450 VLNNIGVIHFEKGEFESAHQSFKDAL 475
             +N+  IH + G    A  S++ AL
Sbjct: 431 AHSNLASIHKDSGNIPEAIASYRTAL 456



 Score = 42.0 bits (97), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 76/347 (21%), Positives = 140/347 (40%), Gaps = 57/347 (16%)

Query: 278 FFFTGQHFLVEQLTETA----LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK 333
              +  HF   +L  +A    LA+    P  + +Y NL   Y  +G  ++A  +Y  +++
Sbjct: 59  LLLSSIHFQCRRLDRSAHFSTLAI-KQNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALR 117

Query: 334 EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIE 393
              KP +FI  Y  L    +  GD   A+  +   L+  PD       LG++   LG++E
Sbjct: 118 L--KP-DFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLE 174

Query: 394 KAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNN 453
           +A+    KA +  P  A A+ +LG                    +    GE         
Sbjct: 175 EAKACYLKAIETQPNFAVAWSNLG-------------------CVFNAQGEIW------- 208

Query: 454 IGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVID-ASASMLQFKDMQLFHRFE 512
           + + HFEK    +   +F DA     ++ L +   +  + D A A+ L+   +       
Sbjct: 209 LAIHHFEKAV--TLDPNFLDA-----YINLGNVLKEARIFDRAVAAYLRALSLS------ 255

Query: 513 NDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKAR 572
              NH  +  N   V +    L++   DT      YR  +     + DAY  LA   K +
Sbjct: 256 --PNHAVVHGNLACVYYEQG-LIDLAIDT------YRRAIELQPHFPDAYCNLANALKEK 306

Query: 573 NNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAA 619
            ++  + +  N AL++   + ++L+ L +++ +  +  +A   +R A
Sbjct: 307 GSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKA 353


>gi|377657074|gb|AFB74087.1| O-linked N-acetylglucosamine transferase [Bubalus bubalis]
          Length = 1046

 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 104/479 (21%), Positives = 189/479 (39%), Gaps = 29/479 (6%)

Query: 142 GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 201
           G+ E A      +   + DN   LL  + + F   R   S  F   A++ +P    A   
Sbjct: 35  GDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYS- 93

Query: 202 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 261
            +G    + GQL +A + ++ AL+L P+ ++  + LA   + A +  G    ++    A 
Sbjct: 94  NLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEG---AVQAYVSAL 150

Query: 262 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 319
           +  P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G
Sbjct: 151 QYNPDLYCVRS--DLGNLLKALGR---LEEAKACYLKAIETQPNFAVAWSNLGCVFNAQG 205

Query: 320 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 379
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++    
Sbjct: 206 EIWLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVH 262

Query: 380 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGA-ALDAFKTARTL 438
             L  +Y + G I+ A +  R+A ++ P    A+ +L   L    + A A D + TA  L
Sbjct: 263 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRL 322

Query: 439 LKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASAS 498
                +      LNN+  I  E+G  E A + ++ AL       +       +   AS  
Sbjct: 323 CPTHADS-----LNNLANIKREQGNIEEAVRLYRKAL------EVFPEFAAAHSNLASVL 371

Query: 499 MLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDY 558
             Q K  +    ++     + +         N+   L+++ D   A   Y   +     +
Sbjct: 372 QQQGKLQEALMHYKEA---IRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAF 428

Query: 559 VDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFR 617
            DA+  LA+I K   N+  +I     ALK+   +P+A   L        DW    E  +
Sbjct: 429 ADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMK 487



 Score = 64.7 bits (156), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 86/386 (22%), Positives = 164/386 (42%), Gaps = 24/386 (6%)

Query: 93  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 152
           Y+ LG +  ++ + +E    A ++Y  A R+       ++     L+A G++E A  A+ 
Sbjct: 92  YSNLGNVYKERGQLQE----AIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 147

Query: 153 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 210
             L+ + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 148 SALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIETQPNFAVAWS-NLGCVFNAQ 204

Query: 211 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 270
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 205 GEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAAYLRALSLSPNHAVV 261

Query: 271 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 330
              LA  ++  G   L       A+ +  H P    +Y NLA +   KG   +A   Y  
Sbjct: 262 HGNLACVYYEQGLIDLAIDTYRRAIELQPHFPD---AYCNLANALKEKGSVAEAEDCYNT 318

Query: 331 SVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLG 390
           +++      + +     L  ++ + G+   A+  + K LE++P+       L  +  Q G
Sbjct: 319 ALRLCPTHADSL---NNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQG 375

Query: 391 QIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGEEVPIE 449
           ++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +          +
Sbjct: 376 KLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA-----D 430

Query: 450 VLNNIGVIHFEKGEFESAHQSFKDAL 475
             +N+  IH + G    A  S++ AL
Sbjct: 431 AHSNLASIHKDSGNIPEAIASYRTAL 456



 Score = 42.0 bits (97), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 76/347 (21%), Positives = 141/347 (40%), Gaps = 57/347 (16%)

Query: 278 FFFTGQHFLVEQLTETA----LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK 333
              +  HF   +L  +A    LA+  + P  + +Y NL   Y  +G  ++A  +Y  +++
Sbjct: 59  LLLSSIHFQCRRLDRSAHFSTLAIKQN-PLLAEAYSNLGNVYKERGQLQEAIEHYRHALR 117

Query: 334 EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIE 393
              KP +FI  Y  L    +  GD   A+  +   L+  PD       LG++   LG++E
Sbjct: 118 L--KP-DFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLE 174

Query: 394 KAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNN 453
           +A+    KA +  P  A A+ +LG                    +    GE         
Sbjct: 175 EAKACYLKAIETQPNFAVAWSNLG-------------------CVFNAQGEIW------- 208

Query: 454 IGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVID-ASASMLQFKDMQLFHRFE 512
           + + HFEK    +   +F DA     ++ L +   +  + D A A+ L+   +       
Sbjct: 209 LAIHHFEKAV--TLDPNFLDA-----YINLGNVLKEARIFDRAVAAYLRALSLS------ 255

Query: 513 NDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKAR 572
              NH  +  N   V +    L++   DT      YR  +     + DAY  LA   K +
Sbjct: 256 --PNHAVVHGNLACVYYEQG-LIDLAIDT------YRRAIELQPHFPDAYCNLANALKEK 306

Query: 573 NNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAA 619
            ++  + +  N AL++   + ++L+ L +++ +  +  +A   +R A
Sbjct: 307 GSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKA 353


>gi|301791309|ref|XP_002930623.1| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit-like
           isoform 2 [Ailuropoda melanoleuca]
 gi|410988810|ref|XP_004000670.1| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit isoform
           1 [Felis catus]
 gi|355708635|gb|AES03331.1| O-linked N-acetylglucosamine transferase [Mustela putorius furo]
          Length = 1046

 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 104/479 (21%), Positives = 189/479 (39%), Gaps = 29/479 (6%)

Query: 142 GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 201
           G+ E A      +   + DN   LL  + + F   R   S  F   A++ +P    A   
Sbjct: 35  GDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYS- 93

Query: 202 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 261
            +G    + GQL +A + ++ AL+L P+ ++  + LA   + A +  G    ++    A 
Sbjct: 94  NLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEG---AVQAYVSAL 150

Query: 262 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 319
           +  P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G
Sbjct: 151 QYNPDLYCVRS--DLGNLLKALGR---LEEAKACYLKAIETQPNFAVAWSNLGCVFNAQG 205

Query: 320 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 379
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++    
Sbjct: 206 EIWLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVH 262

Query: 380 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGA-ALDAFKTARTL 438
             L  +Y + G I+ A +  R+A ++ P    A+ +L   L    + A A D + TA  L
Sbjct: 263 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRL 322

Query: 439 LKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASAS 498
                +      LNN+  I  E+G  E A + ++ AL       +       +   AS  
Sbjct: 323 CPTHADS-----LNNLANIKREQGNIEEAVRLYRKAL------EVFPEFAAAHSNLASVL 371

Query: 499 MLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDY 558
             Q K  +    ++     + +         N+   L+++ D   A   Y   +     +
Sbjct: 372 QQQGKLQEALMHYKEA---IRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAF 428

Query: 559 VDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFR 617
            DA+  LA+I K   N+  +I     ALK+   +P+A   L        DW    E  +
Sbjct: 429 ADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMK 487



 Score = 64.7 bits (156), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 87/391 (22%), Positives = 165/391 (42%), Gaps = 34/391 (8%)

Query: 93  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 152
           Y+ LG +  ++ + +E    A ++Y  A R+       ++     L+A G++E A  A+ 
Sbjct: 92  YSNLGNVYKERGQLQE----AIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 147

Query: 153 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 210
             L+ + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 148 SALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIETQPNFAVAWS-NLGCVFNAQ 204

Query: 211 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 270
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 205 GEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAAYLRALSLSPNHAVV 261

Query: 271 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 330
              LA  ++  G   L       A+ +  H P    +Y NLA +   KG   +A   Y  
Sbjct: 262 HGNLACVYYEQGLIDLAIDTYRRAIELQPHFPD---AYCNLANALKEKGSVAEAEDCYNT 318

Query: 331 SVKEINKPHEFIFPYYG-----LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 385
           +++        + P +      L  ++ + G+   A+  + K LE++P+       L  +
Sbjct: 319 ALR--------LCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASV 370

Query: 386 YVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGE 444
             Q G++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +      
Sbjct: 371 LQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA- 429

Query: 445 EVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
               +  +N+  IH + G    A  S++ AL
Sbjct: 430 ----DAHSNLASIHKDSGNIPEAIASYRTAL 456



 Score = 42.0 bits (97), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 76/347 (21%), Positives = 141/347 (40%), Gaps = 57/347 (16%)

Query: 278 FFFTGQHFLVEQLTETA----LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK 333
              +  HF   +L  +A    LA+  + P  + +Y NL   Y  +G  ++A  +Y  +++
Sbjct: 59  LLLSSIHFQCRRLDRSAHFSTLAIKQN-PLLAEAYSNLGNVYKERGQLQEAIEHYRHALR 117

Query: 334 EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIE 393
              KP +FI  Y  L    +  GD   A+  +   L+  PD       LG++   LG++E
Sbjct: 118 L--KP-DFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLE 174

Query: 394 KAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNN 453
           +A+    KA +  P  A A+ +LG                    +    GE         
Sbjct: 175 EAKACYLKAIETQPNFAVAWSNLG-------------------CVFNAQGEIW------- 208

Query: 454 IGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVID-ASASMLQFKDMQLFHRFE 512
           + + HFEK    +   +F DA     ++ L +   +  + D A A+ L+   +       
Sbjct: 209 LAIHHFEKAV--TLDPNFLDA-----YINLGNVLKEARIFDRAVAAYLRALSLS------ 255

Query: 513 NDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKAR 572
              NH  +  N   V +    L++   DT      YR  +     + DAY  LA   K +
Sbjct: 256 --PNHAVVHGNLACVYYEQG-LIDLAIDT------YRRAIELQPHFPDAYCNLANALKEK 306

Query: 573 NNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAA 619
            ++  + +  N AL++   + ++L+ L +++ +  +  +A   +R A
Sbjct: 307 GSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKA 353


>gi|116622726|ref|YP_824882.1| hypothetical protein Acid_3625 [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116225888|gb|ABJ84597.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Solibacter
           usitatus Ellin6076]
          Length = 547

 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 98/439 (22%), Positives = 178/439 (40%), Gaps = 25/439 (5%)

Query: 131 WVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQ 190
           W      L   G  E A+ +F      +   + A LG       +     +L  + R L+
Sbjct: 99  WFNLAVCLERAGVWEDAAQSFHRAATLEPGYLDAHLGLGVCHLRQEDPKSALFSFDRCLE 158

Query: 191 VHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGI 250
           ++ S   A + G  +    LG    A Q +Q+ L+ +P++ ++L  L ++ +   +   +
Sbjct: 159 LNASHVDA-QFGKAVALQSLGHAEDASQIYQKILEKNPDSEDSLSNLILIGMAKEDFDMV 217

Query: 251 RKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYN 310
           R+  E +    E+ P   +AL  LA+     G+H L  +       + N  P     ++N
Sbjct: 218 REYSEHL---LELRPESTVALEGLASWACAAGEHALTAKFCTL---LVNSVPGHFEGWFN 271

Query: 311 LARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLE 370
           LA ++   G +E+A   Y   VK   +  E    +  LG V+ + GD   A +++E+ ++
Sbjct: 272 LALAHQKSGRFEQAAEAYSECVKLRPQSCE---SHTNLGIVREQTGDTAGARSSYERAIK 328

Query: 371 IYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGEL-LISSDTGAAL 429
             PD    L  L  +    GQ E+++   ++     P++ +A   +G L L   D   A 
Sbjct: 329 AGPDALAPLWNLALLLEHAGQFEESERYYKQVLDRAPKEEEARFRMGFLRLQREDYRGAA 388

Query: 430 DAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTK 489
           +AF+       K     P E   N+ + +   GE + A + ++  L         D K+ 
Sbjct: 389 EAFEGCL----KYRPAWP-EAHANLALAYSGMGERDHAERLYEKMLD-------ADPKSM 436

Query: 490 TYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYR 549
             +   +A  +Q  D      F      ++L      VL+N   + E+      +  LYR
Sbjct: 437 DALRGLAALSIQANDYDTALEFHV--RLIDLGDRTPEVLYNAGLMYEKAGQQDKSVRLYR 494

Query: 550 LILFKYQDYVDAYLRLAAI 568
             L +  D  +A L L  I
Sbjct: 495 DALAQQADMPEALLNLGRI 513


>gi|74007686|ref|XP_538075.2| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit isoform
           1 [Canis lupus familiaris]
          Length = 1036

 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 104/479 (21%), Positives = 189/479 (39%), Gaps = 29/479 (6%)

Query: 142 GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 201
           G+ E A      +   + DN   LL  + + F   R   S  F   A++ +P    A   
Sbjct: 25  GDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYS- 83

Query: 202 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 261
            +G    + GQL +A + ++ AL+L P+ ++  + LA   + A +  G    ++    A 
Sbjct: 84  NLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEG---AVQAYVSAL 140

Query: 262 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 319
           +  P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G
Sbjct: 141 QYNPDLYCVRS--DLGNLLKALGR---LEEAKACYLKAIETQPNFAVAWSNLGCVFNAQG 195

Query: 320 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 379
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++    
Sbjct: 196 EIWLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVH 252

Query: 380 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGA-ALDAFKTARTL 438
             L  +Y + G I+ A +  R+A ++ P    A+ +L   L    + A A D + TA  L
Sbjct: 253 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRL 312

Query: 439 LKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASAS 498
                +      LNN+  I  E+G  E A + ++ AL       +       +   AS  
Sbjct: 313 CPTHADS-----LNNLANIKREQGNIEEAVRLYRKAL------EVFPEFAAAHSNLASVL 361

Query: 499 MLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDY 558
             Q K  +    ++     + +         N+   L+++ D   A   Y   +     +
Sbjct: 362 QQQGKLQEALMHYKEA---IRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAF 418

Query: 559 VDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFR 617
            DA+  LA+I K   N+  +I     ALK+   +P+A   L        DW    E  +
Sbjct: 419 ADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMK 477



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 86/386 (22%), Positives = 164/386 (42%), Gaps = 24/386 (6%)

Query: 93  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 152
           Y+ LG +  ++ + +E    A ++Y  A R+       ++     L+A G++E A  A+ 
Sbjct: 82  YSNLGNVYKERGQLQE----AIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 137

Query: 153 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 210
             L+ + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 138 SALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIETQPNFAVAWS-NLGCVFNAQ 194

Query: 211 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 270
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 195 GEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAAYLRALSLSPNHAVV 251

Query: 271 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 330
              LA  ++  G   L       A+ +  H P    +Y NLA +   KG   +A   Y  
Sbjct: 252 HGNLACVYYEQGLIDLAIDTYRRAIELQPHFPD---AYCNLANALKEKGSVAEAEDCYNT 308

Query: 331 SVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLG 390
           +++      + +     L  ++ + G+   A+  + K LE++P+       L  +  Q G
Sbjct: 309 ALRLCPTHADSL---NNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQG 365

Query: 391 QIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGEEVPIE 449
           ++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +          +
Sbjct: 366 KLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA-----D 420

Query: 450 VLNNIGVIHFEKGEFESAHQSFKDAL 475
             +N+  IH + G    A  S++ AL
Sbjct: 421 AHSNLASIHKDSGNIPEAIASYRTAL 446



 Score = 42.0 bits (97), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 76/347 (21%), Positives = 141/347 (40%), Gaps = 57/347 (16%)

Query: 278 FFFTGQHFLVEQLTETA----LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK 333
              +  HF   +L  +A    LA+  + P  + +Y NL   Y  +G  ++A  +Y  +++
Sbjct: 49  LLLSSIHFQCRRLDRSAHFSTLAIKQN-PLLAEAYSNLGNVYKERGQLQEAIEHYRHALR 107

Query: 334 EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIE 393
              KP +FI  Y  L    +  GD   A+  +   L+  PD       LG++   LG++E
Sbjct: 108 L--KP-DFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLE 164

Query: 394 KAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNN 453
           +A+    KA +  P  A A+ +LG                    +    GE         
Sbjct: 165 EAKACYLKAIETQPNFAVAWSNLG-------------------CVFNAQGEIW------- 198

Query: 454 IGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVID-ASASMLQFKDMQLFHRFE 512
           + + HFEK    +   +F DA     ++ L +   +  + D A A+ L+   +       
Sbjct: 199 LAIHHFEKAV--TLDPNFLDA-----YINLGNVLKEARIFDRAVAAYLRALSLS------ 245

Query: 513 NDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKAR 572
              NH  +  N   V +    L++   DT      YR  +     + DAY  LA   K +
Sbjct: 246 --PNHAVVHGNLACVYYEQG-LIDLAIDT------YRRAIELQPHFPDAYCNLANALKEK 296

Query: 573 NNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAA 619
            ++  + +  N AL++   + ++L+ L +++ +  +  +A   +R A
Sbjct: 297 GSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKA 343


>gi|320352459|ref|YP_004193798.1| hypothetical protein Despr_0323 [Desulfobulbus propionicus DSM
           2032]
 gi|320120961|gb|ADW16507.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfobulbus
           propionicus DSM 2032]
          Length = 758

 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 165/700 (23%), Positives = 260/700 (37%), Gaps = 147/700 (21%)

Query: 54  GKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILA 113
           G+ ++   I+E  ++ +ID  YAD RY+       LG+ Y   G +             A
Sbjct: 44  GENKEKEAIIELRNAIQIDPKYADARYQ-------LGLLYLKSGDVRQ-----------A 85

Query: 114 TQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEF 173
                +A+ +D       +   +  L   + E A      VL    DN  AL  QA +E 
Sbjct: 86  FAELQRAATLDPKNLDAKIKTAEFYLLTKKKEDAQKHIDEVLVQAPDNKDALALQANLEL 145

Query: 174 NRGRYSDSLEFYKRALQVHPSCPG--AIRLGIGLCRYKLGQLGKARQAFQRALQLDPENV 231
             G++  ++    +A+   P+     AI+ G  L   +  Q   A  AF +AL+LD + +
Sbjct: 146 VDGKFDAAIATVDKAIAGAPNEDRFYAIK-GRALSAKQ--QFPAAENAFLKALELDGKKL 202

Query: 232 EALVALAVMDLQANEAAGIRKGMEKMQRAF--EIYPYCAMA-LNYLANHFFFTGQHFLVE 288
                LA   ++  E +  +  +EKM  AF     PY  MA +  + N+     QH    
Sbjct: 203 ANHATLAAFYVERKELSKAKASLEKMAAAFPDSSQPYLQMASIELMENNPDAAEQH---- 258

Query: 289 QLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHE-------F 341
            LT+ AL V    P  S     +A  Y  KG +E+A   Y  ++++ +KP +       F
Sbjct: 259 -LTQ-ALKVD---PKNSKLKTAIADFYSKKGKFEQAEQLYKEAIQDTDKPEDAEAQLANF 313

Query: 342 IFPYYGLGQV------------------------QLKLGDFRSALTNFEKVLEIYPDNCE 377
            F +    Q                         QLK G  + AL     +L  YP   E
Sbjct: 314 YFDHGKFDQAKVELDKVVAKNAKNATAKLVQAKFQLKDGKNQEALDIVTGLLGDYPKWSE 373

Query: 378 T--LKALGHIYV--------------------------------QLGQIEKAQELLRKAA 403
              +KAL H  +                                Q G+ E A++    A 
Sbjct: 374 LFFVKALAHSNLKDFKLAKEALLEAIKLSPGFSKAHSLLALLSLQEGEFETAKKEAATAL 433

Query: 404 KIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEK 461
           KI+PRD QA + L + ++ S        ++TA  +  +   +VP  +EVL ++G+ +   
Sbjct: 434 KINPRDFQAALTLAKGVLFSKE------YETAEKMFSELHAKVPDNVEVLGSLGLTYLAM 487

Query: 462 GEFESAHQSFKDALG------------------DGIWLTLLDSKTKTYVIDASASM-LQF 502
            +   A Q+F+  L                    G     L   T+  +  A  S  LQ 
Sbjct: 488 KQEAKAKQTFEKLLAVQPDNAKAFSFLLQLAQKSGAQKEALIKMTQAQIDKAPKSAGLQI 547

Query: 503 KDMQLFHRFENDGNHVEL--------PWNKVTVLFNLARLLEQIHDTVAASVLYRLILFK 554
               LF   +     +EL        P N      + A +L +   T  A   YR +L K
Sbjct: 548 LLANLFLSAQQPDKALELYSKAQELDPDNPQPYAMS-ALILTRQGKTDQAIAEYRDLLAK 606

Query: 555 YQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDL--ELKNDDWVKA 612
             + + AY+ L +I +      L+ E   +AL V   +  A + L  +  E K+ D    
Sbjct: 607 QPNAIGAYMGLGSIYEQTGKTDLAKEAYQKALAVKPDFAPAANNLAWMIAESKDPDL--- 663

Query: 613 KETFRAASDATDGK-DSYATLSLGNW-----NYFAALRNE 646
            E  R A  A   K D Y  +    W       F+  RNE
Sbjct: 664 GEALRLAMTAKQQKPDDYHIIDTLGWVHYKRGSFSLARNE 703



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 61/251 (24%), Positives = 107/251 (42%), Gaps = 16/251 (6%)

Query: 228 PENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLV 287
           P+NVE L +L +  L   + A  ++  EK+     + P  A A ++L      +G     
Sbjct: 471 PDNVEVLGSLGLTYLAMKQEAKAKQTFEKL---LAVQPDNAKAFSFLLQLAQKSGAQ--K 525

Query: 288 EQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA-GLYYMASVKEINKPHEFIFPYY 346
           E L +   A  +  P  +     LA  + S    +KA  LY  A   + + P     PY 
Sbjct: 526 EALIKMTQAQIDKAPKSAGLQILLANLFLSAQQPDKALELYSKAQELDPDNPQ----PYA 581

Query: 347 GLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKID 406
               +  + G    A+  +  +L   P+       LG IY Q G+ + A+E  +KA  + 
Sbjct: 582 MSALILTRQGKTDQAIAEYRDLLAKQPNAIGAYMGLGSIYEQTGKTDLAKEAYQKALAVK 641

Query: 407 PRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIE--VLNNIGVIHFEKGEF 464
           P  A A  +L  ++  S      +A + A T    A ++ P +  +++ +G +H+++G F
Sbjct: 642 PDFAPAANNLAWMIAESKDPDLGEALRLAMT----AKQQKPDDYHIIDTLGWVHYKRGSF 697

Query: 465 ESAHQSFKDAL 475
             A   F  A+
Sbjct: 698 SLARNEFVQAV 708


>gi|449499306|ref|XP_002189786.2| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit, partial
           [Taeniopygia guttata]
          Length = 1038

 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 102/478 (21%), Positives = 191/478 (39%), Gaps = 27/478 (5%)

Query: 142 GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 201
           G+ E A      +   + DN   LL  + + F   R   S  F   A++ +P    A   
Sbjct: 28  GDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYS- 86

Query: 202 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 261
            +G    + GQL +A + ++ AL+L P+ ++  + LA   + A +  G    ++    A 
Sbjct: 87  NLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEG---AVQAYVSAL 143

Query: 262 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 319
           +  P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G
Sbjct: 144 QYNPDLYCVRS--DLGNLLKALGR---LEEAKACYLKAIETQPNFAVAWSNLGCVFNAQG 198

Query: 320 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 379
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++    
Sbjct: 199 EIWLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVH 255

Query: 380 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLL 439
             L  +Y + G I+ A +  R+A ++ P    A+ +L   L   + G+ ++A +   T L
Sbjct: 256 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANAL--KEKGSVVEAEECYNTAL 313

Query: 440 KKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASM 499
           +        + LNN+  I  E+G  E A + ++ AL       +       +   AS   
Sbjct: 314 RLCPTHA--DSLNNLANIKREQGNIEEAVRLYRKAL------EVFPEFAAAHSNLASVLQ 365

Query: 500 LQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYV 559
            Q K  +    ++     + +         N+   L+++ D   A   Y   +     + 
Sbjct: 366 QQGKLQEALMHYKEA---IRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA 422

Query: 560 DAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFR 617
           DA+  LA+I K   N+  +I     ALK+   +P+A   L        DW    E  +
Sbjct: 423 DAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMK 480



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 86/386 (22%), Positives = 164/386 (42%), Gaps = 24/386 (6%)

Query: 93  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 152
           Y+ LG +  ++ + +E    A ++Y  A R+       ++     L+A G++E A  A+ 
Sbjct: 85  YSNLGNVYKERGQLQE----AIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 140

Query: 153 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 210
             L+ + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 141 SALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIETQPNFAVAWS-NLGCVFNAQ 197

Query: 211 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 270
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 198 GEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAAYLRALSLSPNHAVV 254

Query: 271 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 330
              LA  ++  G   L       A+ +  H P    +Y NLA +   KG   +A   Y  
Sbjct: 255 HGNLACVYYEQGLIDLAIDTYRRAIELQPHFPD---AYCNLANALKEKGSVVEAEECYNT 311

Query: 331 SVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLG 390
           +++      + +     L  ++ + G+   A+  + K LE++P+       L  +  Q G
Sbjct: 312 ALRLCPTHADSL---NNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQG 368

Query: 391 QIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGEEVPIE 449
           ++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +          +
Sbjct: 369 KLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA-----D 423

Query: 450 VLNNIGVIHFEKGEFESAHQSFKDAL 475
             +N+  IH + G    A  S++ AL
Sbjct: 424 AHSNLASIHKDSGNIPEAIASYRTAL 449


>gi|281337757|gb|EFB13341.1| hypothetical protein PANDA_021118 [Ailuropoda melanoleuca]
          Length = 1037

 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 104/479 (21%), Positives = 189/479 (39%), Gaps = 29/479 (6%)

Query: 142 GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 201
           G+ E A      +   + DN   LL  + + F   R   S  F   A++ +P    A   
Sbjct: 26  GDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYS- 84

Query: 202 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 261
            +G    + GQL +A + ++ AL+L P+ ++  + LA   + A +  G    ++    A 
Sbjct: 85  NLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEG---AVQAYVSAL 141

Query: 262 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 319
           +  P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G
Sbjct: 142 QYNPDLYCVRS--DLGNLLKALGR---LEEAKACYLKAIETQPNFAVAWSNLGCVFNAQG 196

Query: 320 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 379
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++    
Sbjct: 197 EIWLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVH 253

Query: 380 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGA-ALDAFKTARTL 438
             L  +Y + G I+ A +  R+A ++ P    A+ +L   L    + A A D + TA  L
Sbjct: 254 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRL 313

Query: 439 LKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASAS 498
                +      LNN+  I  E+G  E A + ++ AL       +       +   AS  
Sbjct: 314 CPTHADS-----LNNLANIKREQGNIEEAVRLYRKAL------EVFPEFAAAHSNLASVL 362

Query: 499 MLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDY 558
             Q K  +    ++     + +         N+   L+++ D   A   Y   +     +
Sbjct: 363 QQQGKLQEALMHYKEA---IRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAF 419

Query: 559 VDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFR 617
            DA+  LA+I K   N+  +I     ALK+   +P+A   L        DW    E  +
Sbjct: 420 ADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMK 478



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 86/386 (22%), Positives = 164/386 (42%), Gaps = 24/386 (6%)

Query: 93  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 152
           Y+ LG +  ++ + +E    A ++Y  A R+       ++     L+A G++E A  A+ 
Sbjct: 83  YSNLGNVYKERGQLQE----AIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 138

Query: 153 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 210
             L+ + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 139 SALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIETQPNFAVAWS-NLGCVFNAQ 195

Query: 211 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 270
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 196 GEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAAYLRALSLSPNHAVV 252

Query: 271 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 330
              LA  ++  G   L       A+ +  H P    +Y NLA +   KG   +A   Y  
Sbjct: 253 HGNLACVYYEQGLIDLAIDTYRRAIELQPHFPD---AYCNLANALKEKGSVAEAEDCYNT 309

Query: 331 SVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLG 390
           +++      + +     L  ++ + G+   A+  + K LE++P+       L  +  Q G
Sbjct: 310 ALRLCPTHADSL---NNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQG 366

Query: 391 QIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGEEVPIE 449
           ++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +          +
Sbjct: 367 KLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA-----D 421

Query: 450 VLNNIGVIHFEKGEFESAHQSFKDAL 475
             +N+  IH + G    A  S++ AL
Sbjct: 422 AHSNLASIHKDSGNIPEAIASYRTAL 447



 Score = 42.0 bits (97), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 76/347 (21%), Positives = 141/347 (40%), Gaps = 57/347 (16%)

Query: 278 FFFTGQHFLVEQLTETA----LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK 333
              +  HF   +L  +A    LA+  + P  + +Y NL   Y  +G  ++A  +Y  +++
Sbjct: 50  LLLSSIHFQCRRLDRSAHFSTLAIKQN-PLLAEAYSNLGNVYKERGQLQEAIEHYRHALR 108

Query: 334 EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIE 393
              KP +FI  Y  L    +  GD   A+  +   L+  PD       LG++   LG++E
Sbjct: 109 L--KP-DFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLE 165

Query: 394 KAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNN 453
           +A+    KA +  P  A A+ +LG                    +    GE         
Sbjct: 166 EAKACYLKAIETQPNFAVAWSNLG-------------------CVFNAQGEIW------- 199

Query: 454 IGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVID-ASASMLQFKDMQLFHRFE 512
           + + HFEK    +   +F DA     ++ L +   +  + D A A+ L+   +       
Sbjct: 200 LAIHHFEKAV--TLDPNFLDA-----YINLGNVLKEARIFDRAVAAYLRALSLS------ 246

Query: 513 NDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKAR 572
              NH  +  N   V +    L++   DT      YR  +     + DAY  LA   K +
Sbjct: 247 --PNHAVVHGNLACVYYEQG-LIDLAIDT------YRRAIELQPHFPDAYCNLANALKEK 297

Query: 573 NNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAA 619
            ++  + +  N AL++   + ++L+ L +++ +  +  +A   +R A
Sbjct: 298 GSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKA 344


>gi|139948535|ref|NP_058803.2| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
           110 kDa subunit [Rattus norvegicus]
 gi|149042180|gb|EDL95887.1| O-linked N-acetylglucosamine (GlcNAc) transferase
           (UDP-N-acetylglucosamine:polypeptide-N-
           acetylglucosaminyl transferase), isoform CRA_b [Rattus
           norvegicus]
 gi|149042181|gb|EDL95888.1| O-linked N-acetylglucosamine (GlcNAc) transferase
           (UDP-N-acetylglucosamine:polypeptide-N-
           acetylglucosaminyl transferase), isoform CRA_b [Rattus
           norvegicus]
          Length = 1036

 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 104/479 (21%), Positives = 189/479 (39%), Gaps = 29/479 (6%)

Query: 142 GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 201
           G+ E A      +   + DN   LL  + + F   R   S  F   A++ +P    A   
Sbjct: 25  GDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYS- 83

Query: 202 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 261
            +G    + GQL +A + ++ AL+L P+ ++  + LA   + A +  G    ++    A 
Sbjct: 84  NLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEG---AVQAYVSAL 140

Query: 262 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 319
           +  P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G
Sbjct: 141 QYNPDLYCVRS--DLGNLLKALGR---LEEAKACYLKAIETQPNFAVAWSNLGCVFNAQG 195

Query: 320 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 379
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++    
Sbjct: 196 EIWLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVH 252

Query: 380 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGA-ALDAFKTARTL 438
             L  +Y + G I+ A +  R+A ++ P    A+ +L   L    + A A D + TA  L
Sbjct: 253 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRL 312

Query: 439 LKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASAS 498
                +      LNN+  I  E+G  E A + ++ AL       +       +   AS  
Sbjct: 313 CPTHADS-----LNNLANIKREQGNIEEAVRLYRKAL------EVFPEFAAAHSNLASVL 361

Query: 499 MLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDY 558
             Q K  +    ++     + +         N+   L+++ D   A   Y   +     +
Sbjct: 362 QQQGKLQEALMHYKEA---IRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAF 418

Query: 559 VDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFR 617
            DA+  LA+I K   N+  +I     ALK+   +P+A   L        DW    E  +
Sbjct: 419 ADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMK 477



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 86/386 (22%), Positives = 164/386 (42%), Gaps = 24/386 (6%)

Query: 93  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 152
           Y+ LG +  ++ + +E    A ++Y  A R+       ++     L+A G++E A  A+ 
Sbjct: 82  YSNLGNVYKERGQLQE----AIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 137

Query: 153 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 210
             L+ + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 138 SALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIETQPNFAVAWS-NLGCVFNAQ 194

Query: 211 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 270
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 195 GEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAAYLRALSLSPNHAVV 251

Query: 271 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 330
              LA  ++  G   L       A+ +  H P    +Y NLA +   KG   +A   Y  
Sbjct: 252 HGNLACVYYEQGLIDLAIDTYRRAIELQPHFPD---AYCNLANALKEKGSVAEAEDCYNT 308

Query: 331 SVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLG 390
           +++      + +     L  ++ + G+   A+  + K LE++P+       L  +  Q G
Sbjct: 309 ALRLCPTHADSL---NNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQG 365

Query: 391 QIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGEEVPIE 449
           ++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +          +
Sbjct: 366 KLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA-----D 420

Query: 450 VLNNIGVIHFEKGEFESAHQSFKDAL 475
             +N+  IH + G    A  S++ AL
Sbjct: 421 AHSNLASIHKDSGNIPEAIASYRTAL 446



 Score = 42.0 bits (97), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 76/347 (21%), Positives = 141/347 (40%), Gaps = 57/347 (16%)

Query: 278 FFFTGQHFLVEQLTETA----LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK 333
              +  HF   +L  +A    LA+  + P  + +Y NL   Y  +G  ++A  +Y  +++
Sbjct: 49  LLLSSIHFQCRRLDRSAHFSTLAIKQN-PLLAEAYSNLGNVYKERGQLQEAIEHYRHALR 107

Query: 334 EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIE 393
              KP +FI  Y  L    +  GD   A+  +   L+  PD       LG++   LG++E
Sbjct: 108 L--KP-DFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLE 164

Query: 394 KAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNN 453
           +A+    KA +  P  A A+ +LG                    +    GE         
Sbjct: 165 EAKACYLKAIETQPNFAVAWSNLG-------------------CVFNAQGEIW------- 198

Query: 454 IGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVID-ASASMLQFKDMQLFHRFE 512
           + + HFEK    +   +F DA     ++ L +   +  + D A A+ L+   +       
Sbjct: 199 LAIHHFEKAV--TLDPNFLDA-----YINLGNVLKEARIFDRAVAAYLRALSLS------ 245

Query: 513 NDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKAR 572
              NH  +  N   V +    L++   DT      YR  +     + DAY  LA   K +
Sbjct: 246 --PNHAVVHGNLACVYYEQG-LIDLAIDT------YRRAIELQPHFPDAYCNLANALKEK 296

Query: 573 NNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAA 619
            ++  + +  N AL++   + ++L+ L +++ +  +  +A   +R A
Sbjct: 297 GSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKA 343


>gi|74007670|ref|XP_849392.1| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit isoform
           2 [Canis lupus familiaris]
          Length = 1046

 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 104/479 (21%), Positives = 189/479 (39%), Gaps = 29/479 (6%)

Query: 142 GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 201
           G+ E A      +   + DN   LL  + + F   R   S  F   A++ +P    A   
Sbjct: 35  GDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYS- 93

Query: 202 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 261
            +G    + GQL +A + ++ AL+L P+ ++  + LA   + A +  G    ++    A 
Sbjct: 94  NLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEG---AVQAYVSAL 150

Query: 262 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 319
           +  P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G
Sbjct: 151 QYNPDLYCVRS--DLGNLLKALGR---LEEAKACYLKAIETQPNFAVAWSNLGCVFNAQG 205

Query: 320 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 379
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++    
Sbjct: 206 EIWLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVH 262

Query: 380 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGA-ALDAFKTARTL 438
             L  +Y + G I+ A +  R+A ++ P    A+ +L   L    + A A D + TA  L
Sbjct: 263 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRL 322

Query: 439 LKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASAS 498
                +      LNN+  I  E+G  E A + ++ AL       +       +   AS  
Sbjct: 323 CPTHADS-----LNNLANIKREQGNIEEAVRLYRKAL------EVFPEFAAAHSNLASVL 371

Query: 499 MLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDY 558
             Q K  +    ++     + +         N+   L+++ D   A   Y   +     +
Sbjct: 372 QQQGKLQEALMHYKEA---IRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAF 428

Query: 559 VDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFR 617
            DA+  LA+I K   N+  +I     ALK+   +P+A   L        DW    E  +
Sbjct: 429 ADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMK 487



 Score = 64.7 bits (156), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 87/391 (22%), Positives = 165/391 (42%), Gaps = 34/391 (8%)

Query: 93  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 152
           Y+ LG +  ++ + +E    A ++Y  A R+       ++     L+A G++E A  A+ 
Sbjct: 92  YSNLGNVYKERGQLQE----AIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 147

Query: 153 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 210
             L+ + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 148 SALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIETQPNFAVAWS-NLGCVFNAQ 204

Query: 211 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 270
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 205 GEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAAYLRALSLSPNHAVV 261

Query: 271 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 330
              LA  ++  G   L       A+ +  H P    +Y NLA +   KG   +A   Y  
Sbjct: 262 HGNLACVYYEQGLIDLAIDTYRRAIELQPHFPD---AYCNLANALKEKGSVAEAEDCYNT 318

Query: 331 SVKEINKPHEFIFPYYG-----LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 385
           +++        + P +      L  ++ + G+   A+  + K LE++P+       L  +
Sbjct: 319 ALR--------LCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASV 370

Query: 386 YVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGE 444
             Q G++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +      
Sbjct: 371 LQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA- 429

Query: 445 EVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
               +  +N+  IH + G    A  S++ AL
Sbjct: 430 ----DAHSNLASIHKDSGNIPEAIASYRTAL 456



 Score = 42.0 bits (97), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 76/347 (21%), Positives = 141/347 (40%), Gaps = 57/347 (16%)

Query: 278 FFFTGQHFLVEQLTETA----LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK 333
              +  HF   +L  +A    LA+  + P  + +Y NL   Y  +G  ++A  +Y  +++
Sbjct: 59  LLLSSIHFQCRRLDRSAHFSTLAIKQN-PLLAEAYSNLGNVYKERGQLQEAIEHYRHALR 117

Query: 334 EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIE 393
              KP +FI  Y  L    +  GD   A+  +   L+  PD       LG++   LG++E
Sbjct: 118 L--KP-DFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLE 174

Query: 394 KAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNN 453
           +A+    KA +  P  A A+ +LG                    +    GE         
Sbjct: 175 EAKACYLKAIETQPNFAVAWSNLG-------------------CVFNAQGEIW------- 208

Query: 454 IGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVID-ASASMLQFKDMQLFHRFE 512
           + + HFEK    +   +F DA     ++ L +   +  + D A A+ L+   +       
Sbjct: 209 LAIHHFEKAV--TLDPNFLDA-----YINLGNVLKEARIFDRAVAAYLRALSLS------ 255

Query: 513 NDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKAR 572
              NH  +  N   V +    L++   DT      YR  +     + DAY  LA   K +
Sbjct: 256 --PNHAVVHGNLACVYYEQG-LIDLAIDT------YRRAIELQPHFPDAYCNLANALKEK 306

Query: 573 NNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAA 619
            ++  + +  N AL++   + ++L+ L +++ +  +  +A   +R A
Sbjct: 307 GSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKA 353


>gi|257458204|ref|ZP_05623358.1| TPR domain protein [Treponema vincentii ATCC 35580]
 gi|257444498|gb|EEV19587.1| TPR domain protein [Treponema vincentii ATCC 35580]
          Length = 388

 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 65/291 (22%), Positives = 127/291 (43%), Gaps = 19/291 (6%)

Query: 134 KGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHP 193
           +G L L   E+++A + FK +LE D +N  AL+G       R +  ++ E+Y   L+ HP
Sbjct: 42  EGYLFLKANEIDRAEAEFKKMLELDENNNYALVGLGDAARKRNKCKEAAEYYSECLRHHP 101

Query: 194 SCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKG 253
               A+  G+  C   +    KA + +++ L+ D  N+     +A    + ++    +K 
Sbjct: 102 GNNYAL-FGLADCYKNMNLYAKAIEIWEQYLEHDNANITVFTRVADAYRKIHDFQNSKKL 160

Query: 254 MEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETAL---AVTNHGP--TKSHSY 308
             K+    E  PY  + L +L         H+  ++  E  +    + +  P        
Sbjct: 161 YLKVLEIEENNPYALIGLGHL---------HYDFKKYREALVYWQKIFDQNPENVDIRIL 211

Query: 309 YNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKV 368
            ++   Y     +++ G+YY    K + K  +  +  +GL      +   + ++  +E +
Sbjct: 212 TSIGNCYRKMKQFDR-GVYYFE--KALEKDPDNFYGLFGLADCYRGMKQQQHSIKYWEAI 268

Query: 369 LEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGEL 419
           L   P+N   L  +G  Y  +G  EKA+++ ++A  ID  D+ A + L  L
Sbjct: 269 LSKDPNNKVILTRMGDAYRHIGDYEKAEQIYQRALDID-YDSYAILGLAIL 318


>gi|124023613|ref|YP_001017920.1| hypothetical protein P9303_19131 [Prochlorococcus marinus str. MIT
           9303]
 gi|123963899|gb|ABM78655.1| Hypothetical protein P9303_19131 [Prochlorococcus marinus str. MIT
           9303]
          Length = 936

 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 75/320 (23%), Positives = 132/320 (41%), Gaps = 38/320 (11%)

Query: 129 STWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRA 188
           + W+  G  L  +G  ++A  A + VLE   DN  AL+    +  + G+   +L    ++
Sbjct: 306 AAWINIGTALKREGRNQEALQATQKVLELKPDNPDALMNLGGIYQDLGKLDLALASTLKS 365

Query: 189 LQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA---------- 238
           L++ P  P A  + +G     L +L  A  +  ++L+L  +N  AL+ L           
Sbjct: 366 LELKPDNPTA-HMNLGGIYKDLAKLDLALASTLKSLELKSDNPNALINLGGIYKDLAKLD 424

Query: 239 --------VMDLQANEA------AGIRKGMEKMQ-------RAFEIYPYCAMALNYLANH 277
                    ++L+ N         GI + + ++        ++ E+ P    AL  L   
Sbjct: 425 LALASTLKSLELKPNNPDALMNLGGIYQDLGELDPALASTLKSLELKPDNPDALMNLGGI 484

Query: 278 FFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINK 337
           +    +  L    T  +L +    PT   ++ NL   Y    D  K  L   +++K +  
Sbjct: 485 YQDLAKLDLALASTLKSLELNPDNPT---AHMNLGGIYQ---DLGKLDLALASTLKSLEL 538

Query: 338 PHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQE 397
             +       LG +   LG+   AL +  K LE  PDN   L  LG IY  LG+++ A  
Sbjct: 539 KSDNPSALMNLGGIYKDLGELDLALASTLKSLEFNPDNPSALMNLGGIYQDLGKLDLALA 598

Query: 398 LLRKAAKIDPRDAQAFIDLG 417
              K+ + +P +  A ++LG
Sbjct: 599 STLKSLEFNPDNPDALMNLG 618



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 83/343 (24%), Positives = 136/343 (39%), Gaps = 45/343 (13%)

Query: 109 HFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQ 168
            F  A Q   KA ++D  +P      G   L  G  E A   ++  LE +    PA    
Sbjct: 49  QFEKAQQSLKKAHQLDKTDPEIAKDIGNTFLNLGNQENALQWYEKALEINNKYAPAFNNI 108

Query: 169 ACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLD- 227
           A ++   G + ++++ +KRA+Q  P    A  +G       LG L +A     +AL+++ 
Sbjct: 109 ANLKRQIGNHQEAIDLFKRAIQADPKLIQAY-IGAAASHLALGNLDQAESFATQALKINA 167

Query: 228 --PENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYC-----------------A 268
             PE V  ++ +   + Q  + A     +E  Q+   I P                    
Sbjct: 168 NAPE-VNEILGIVFQNKQNPDQA-----IEHYQKELNINPQARNSLLNSGLLLLQNRQPT 221

Query: 269 MALNYLAN----------HFFFTGQHFLVEQLTETALAVTNHGPTKSHSY---YNLARSY 315
            AL  LA                  H  + QL E  +        +S++    +NL    
Sbjct: 222 AALESLAKASAIAPSEQCSLLLAQTHQKLGQLKEAIIEYQKLNINQSNNKLIPFNLGLCL 281

Query: 316 HSKGDYEKA-GLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPD 374
              GD  +A G + +A    I     FI  +  +G    + G  + AL   +KVLE+ PD
Sbjct: 282 FEIGDNNQAIGAFQIA----IQLDETFIAAWINIGTALKREGRNQEALQATQKVLELKPD 337

Query: 375 NCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 417
           N + L  LG IY  LG+++ A     K+ ++ P +  A ++LG
Sbjct: 338 NPDALMNLGGIYQDLGKLDLALASTLKSLELKPDNPTAHMNLG 380



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 82/337 (24%), Positives = 150/337 (44%), Gaps = 26/337 (7%)

Query: 84  AILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLL--LAK 141
           A++N LG  Y  LGK++           LA     K+  +    P+  +  G +   LAK
Sbjct: 341 ALMN-LGGIYQDLGKLD-----------LALASTLKSLELKPDNPTAHMNLGGIYKDLAK 388

Query: 142 GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 201
            ++  AS+   + L++D  N  AL+    +  +  +   +L    ++L++ P+ P A+ +
Sbjct: 389 LDLALASTLKSLELKSDNPN--ALINLGGIYKDLAKLDLALASTLKSLELKPNNPDAL-M 445

Query: 202 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 261
            +G     LG+L  A  +  ++L+L P+N +AL+ L  +     + A +   +    ++ 
Sbjct: 446 NLGGIYQDLGELDPALASTLKSLELKPDNPDALMNLGGI---YQDLAKLDLALASTLKSL 502

Query: 262 EIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDY 321
           E+ P    A   L   +   G+  L    T  +L + +  P+   +  NL   Y   G+ 
Sbjct: 503 ELNPDNPTAHMNLGGIYQDLGKLDLALASTLKSLELKSDNPS---ALMNLGGIYKDLGEL 559

Query: 322 EKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKA 381
           +   L   +++K +    +       LG +   LG    AL +  K LE  PDN + L  
Sbjct: 560 D---LALASTLKSLEFNPDNPSALMNLGGIYQDLGKLDLALASTLKSLEFNPDNPDALMN 616

Query: 382 LGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGE 418
           LG IY  LG+++ A   L++A K +    ++ I L E
Sbjct: 617 LGGIYKDLGELDLALACLQEAKKSEKAKEESSIRLAE 653



 Score = 39.7 bits (91), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 105/443 (23%), Positives = 182/443 (41%), Gaps = 56/443 (12%)

Query: 176 GRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEAL- 234
           GR+ + L+  + +L+  P    A +   G     LGQ  KA+Q+ ++A QLD  + E   
Sbjct: 14  GRHQECLQACQNSLKEKPEEIFAFKYA-GKSLLALGQFEKAQQSLKKAHQLDKTDPEIAK 72

Query: 235 -VALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTET 293
            +    ++L   E A     ++  ++A EI    A A N +AN     G H     L + 
Sbjct: 73  DIGNTFLNLGNQENA-----LQWYEKALEINNKYAPAFNNIANLKRQIGNHQEAIDLFKR 127

Query: 294 ALAVTNHGPTKSHSYYNLARSYHSKGDYEKA------GLYYMASVKEINKPHEFIFPYYG 347
           A+      P    +Y   A S+ + G+ ++A       L   A+  E+N+          
Sbjct: 128 AIQAD---PKLIQAYIGAAASHLALGNLDQAESFATQALKINANAPEVNEI--------- 175

Query: 348 LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 407
           LG V     +   A+ +++K L I P    +L   G + +Q  Q   A E L KA+ I P
Sbjct: 176 LGIVFQNKQNPDQAIEHYQKELNINPQARNSLLNSGLLLLQNRQPTAALESLAKASAIAP 235

Query: 408 RD------AQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEK 461
            +      AQ    LG+L  +      L+  ++   L       +P     N+G+  FE 
Sbjct: 236 SEQCSLLLAQTHQKLGQLKEAIIEYQKLNINQSNNKL-------IPF----NLGLCLFEI 284

Query: 462 GEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELP 521
           G+   A  +F+      I + L ++    ++   +A   + ++ +     +     +EL 
Sbjct: 285 GDNNQAIGAFQ------IAIQLDETFIAAWINIGTALKREGRNQEALQATQ---KVLELK 335

Query: 522 WNKVTVLFNLARLLEQIH--DTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSI 579
            +    L NL  + + +   D   AS L  L L    D   A++ L  I K    L L++
Sbjct: 336 PDNPDALMNLGGIYQDLGKLDLALASTLKSLEL--KPDNPTAHMNLGGIYKDLAKLDLAL 393

Query: 580 ELVNEALKVNGKYPNALSMLGDL 602
               ++L++    PNAL  LG +
Sbjct: 394 ASTLKSLELKSDNPNALINLGGI 416


>gi|420255103|ref|ZP_14758056.1| tetratricopeptide repeat protein, partial [Burkholderia sp. BT03]
 gi|398046724|gb|EJL39314.1| tetratricopeptide repeat protein, partial [Burkholderia sp. BT03]
          Length = 576

 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 81/329 (24%), Positives = 142/329 (43%), Gaps = 24/329 (7%)

Query: 142 GEVEQASSAFKIVLEADRDNVPAL--LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAI 199
           G ++ A   ++  LE D  +V AL  LG  C    +G++ ++ +  +RA  + P    A+
Sbjct: 27  GRLDDAERDYRATLELDPVHVDALHLLGVLC--HQQGQHEEAADLVRRAADLRPQD-AAL 83

Query: 200 RLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRK-GMEKMQ 258
           +L +G     LG+L +A + F+ AL L P    A   L      A   AG  +  ++  Q
Sbjct: 84  QLNLGNALKALGRLDQAIERFRNALTLAPTFPMAHYNLG----NAYALAGRHEDAVDAFQ 139

Query: 259 RAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSK 318
           ++  + P  A +   L N     G+H         AL +    P  + ++ N+  + ++ 
Sbjct: 140 KSLRLQPLDASSHVNLGNALHALGRHREAVDSFRRALELR---PGHAGAHNNIGMALNAL 196

Query: 319 GDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCET 378
           G   +A  ++ A+ K   +   F+   + LG      G    A+  FE VL +  +    
Sbjct: 197 GSAREAIAHFRAAFKIEPR---FVAARFNLGNTLDATGQHHEAVAEFEAVLTLQTNLPPA 253

Query: 379 LKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTL 438
           L  LG+    LG+ E+A+    +A  +DP  A A++ LG          AL A+  A   
Sbjct: 254 LFGLGNALASLGRHEEARPRFERAVGLDPNFALAWLSLGA------AHHALGAYDAALRA 307

Query: 439 LKKAGEEVPIEVLN--NIGVIHFEKGEFE 465
             +A    P + +   N GV    +G+F+
Sbjct: 308 FDQALRLRPDQAIAHMNRGVTLLTRGDFK 336



 Score = 42.4 bits (98), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 60/121 (49%), Gaps = 6/121 (4%)

Query: 356 GDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFID 415
           G    A  ++   LE+ P + + L  LG +  Q GQ E+A +L+R+AA + P+DA   ++
Sbjct: 27  GRLDDAERDYRATLELDPVHVDALHLLGVLCHQQGQHEEAADLVRRAADLRPQDAALQLN 86

Query: 416 LGELLIS-SDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDA 474
           LG  L +      A++ F+ A TL        P+    N+G  +   G  E A  +F+ +
Sbjct: 87  LGNALKALGRLDQAIERFRNALTL----APTFPM-AHYNLGNAYALAGRHEDAVDAFQKS 141

Query: 475 L 475
           L
Sbjct: 142 L 142



 Score = 41.2 bits (95), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 46/176 (26%), Positives = 76/176 (43%), Gaps = 29/176 (16%)

Query: 56  VEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQ 115
           V+ FR+ LE             +R       N +G+    LG      RE   HF  A +
Sbjct: 169 VDSFRRALE-------------LRPGHAGAHNNIGMALNALGS----AREAIAHFRAAFK 211

Query: 116 YYNK--ASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEF 173
              +  A+R ++         G  L A G+  +A + F+ VL    +  PAL G      
Sbjct: 212 IEPRFVAARFNL---------GNTLDATGQHHEAVAEFEAVLTLQTNLPPALFGLGNALA 262

Query: 174 NRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPE 229
           + GR+ ++   ++RA+ + P+   A  L +G   + LG    A +AF +AL+L P+
Sbjct: 263 SLGRHEEARPRFERAVGLDPNFALAW-LSLGAAHHALGAYDAALRAFDQALRLRPD 317


>gi|332706151|ref|ZP_08426221.1| hypothetical protein LYNGBM3L_14950 [Moorea producens 3L]
 gi|332355087|gb|EGJ34557.1| hypothetical protein LYNGBM3L_14950 [Moorea producens 3L]
          Length = 1693

 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 101/433 (23%), Positives = 185/433 (42%), Gaps = 55/433 (12%)

Query: 94  TYLGKIETKQREKEEHFILATQYYNKASRI-----DMHEPSTWVGKGQLLLAKGE-VEQA 147
           T LG +    R +E+ +  A  YY +A  I     +  + ST +G    L  K E  +QA
Sbjct: 459 TTLGNLAELYRNQEQ-YDQAIDYYQQALAIHREVKNQADESTTLGNIATLYQKQEQYDQA 517

Query: 148 SSAFKIVLEADRD--------NVPALLGQACVEFNRGRYSDSLEFYKRALQVHP-----S 194
            + ++ VL   R+        +  A +GQ  V + +G Y  ++ +Y++AL +       +
Sbjct: 518 LNYYQKVLAIHREVKNQVQEWSTLAKIGQ--VYYQQGNYQQTINYYQQALAISKKIDNLT 575

Query: 195 CPGAIRLGIGLCRYKLGQLGKARQAFQRALQ----LDPENVEALVALAVMDLQANEAAGI 250
             GA   GIG   Y  G+ G+A   +Q+AL+    L+  ++EA + L  + L        
Sbjct: 576 GEGANLWGIGQAYYAWGKPGQAIDYYQQALEIYRKLNNTSIEASI-LGGLGLAQISQGKY 634

Query: 251 RKGMEKMQRAFEIYPYCA------MALNYLANHFFFTGQHFLVEQLTETALAVT---NHG 301
            + ++  Q+   I           +ALN++   + + G++       + AL +    N  
Sbjct: 635 DQALKSYQQLLAIARQIKEPSQEIIALNFIGQVYEYQGKYDQALNYYQQALTIAKEINDQ 694

Query: 302 PTKSHSYYNLARSYHSKGDYEKAGLYYMASV---KEINKPHEFIFPYYGLGQVQLKLGDF 358
            T      N+   Y + G Y +A  YY  ++   K +N   +       +G +    G +
Sbjct: 695 KTTVDLLNNIGVVYSNWGKYNQALDYYQQTLTISKSLNDSIKIATILNNIGWIYDGYGKY 754

Query: 359 RSALTNFEKVLEIYP-------DNCET-LKALGHIYVQLGQIEKAQELLRKAAKID---- 406
             AL  +++ L I         DN  T    +GH+Y   G+ ++A E  ++A  I     
Sbjct: 755 SQALDYYQQALAINQELGDLRRDNVATNFTNIGHVYHSQGEYDRANEYFQQALAISKDIG 814

Query: 407 --PRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGEEV-PIEVLNNIGVIHFEKG 462
              ++A    ++G +  S  +   A + F+ +  + ++ G+       LNNIG I + +G
Sbjct: 815 YRSQEANILNNIGSVYDSQGEYDRANEYFQQSLAISQEIGDRSGESTTLNNIGFIDYARG 874

Query: 463 EFESAHQSFKDAL 475
           E+  A + F  AL
Sbjct: 875 EYAQALEYFHQAL 887



 Score = 48.5 bits (114), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 102/482 (21%), Positives = 189/482 (39%), Gaps = 115/482 (23%)

Query: 27  SDILDILKAEQAPLDLWLIIAREYFKQGK----VEQFRQILEEGSSPEIDEYYADVRYER 82
           S  +D L  E A  +LW I  + Y+  GK    ++ ++Q LE          Y  +    
Sbjct: 568 SKKIDNLTGEGA--NLWGI-GQAYYAWGKPGQAIDYYQQALE---------IYRKLNNTS 615

Query: 83  I--AILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGK----GQ 136
           I  +IL  LG+     GK +   +  ++   +A Q         + EPS  +      GQ
Sbjct: 616 IEASILGGLGLAQISQGKYDQALKSYQQLLAIARQ---------IKEPSQEIIALNFIGQ 666

Query: 137 LLLAKGEVEQASSAFKIVLEA-----DRDNVPALLGQACVEF-NRGRYSDSLEFYKRALQ 190
           +   +G+ +QA + ++  L       D+     LL    V + N G+Y+ +L++Y++ L 
Sbjct: 667 VYEYQGKYDQALNYYQQALTIAKEINDQKTTVDLLNNIGVVYSNWGKYNQALDYYQQTLT 726

Query: 191 VHPSCPGAIRLG-----IGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQAN 245
           +  S   +I++      IG      G+  +A   +Q+AL ++ E         + DL+ +
Sbjct: 727 ISKSLNDSIKIATILNNIGWIYDGYGKYSQALDYYQQALAINQE---------LGDLRRD 777

Query: 246 EAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVT---NHGP 302
                                 A     + + +   G++    +  + ALA++    +  
Sbjct: 778 N--------------------VATNFTNIGHVYHSQGEYDRANEYFQQALAISKDIGYRS 817

Query: 303 TKSHSYYNLARSYHSKGDYEKAGLYYMASV---KEINKPHEFIFPYYGLGQVQLKLGDFR 359
            +++   N+   Y S+G+Y++A  Y+  S+   +EI            +G +    G++ 
Sbjct: 818 QEANILNNIGSVYDSQGEYDRANEYFQQSLAISQEIGDRSGESTTLNNIGFIDYARGEYA 877

Query: 360 SALTNFEKVLEIYPD------NCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAF 413
            AL  F + L I  D         TL  +G +Y+  G   KA    +++ KI        
Sbjct: 878 QALEYFHQALVIQQDLGKRFEEATTLGNIGTVYISWGDYAKALNYHQQSLKIKQ------ 931

Query: 414 IDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKD 473
            D+G+       GA L                      NNIG I+ ++GE+E   +  + 
Sbjct: 932 -DIGD---KRGVGANL----------------------NNIGRIYTDQGEYERGLKYLQQ 965

Query: 474 AL 475
           AL
Sbjct: 966 AL 967



 Score = 45.1 bits (105), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 96/446 (21%), Positives = 158/446 (35%), Gaps = 109/446 (24%)

Query: 83   IAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWV--GKGQLLLA 140
            + +LN +GV Y+  GK        ++   ++    +      +     W+  G G+   A
Sbjct: 698  VDLLNNIGVVYSNWGKYNQALDYYQQTLTISKSLNDSIKIATILNNIGWIYDGYGKYSQA 757

Query: 141  KGEVEQASSAFKIVLEADRDNVPA-LLGQACVEFNRGRYSDSLEFYKRALQV-----HPS 194
                +QA +  + + +  RDNV         V  ++G Y  + E++++AL +     + S
Sbjct: 758  LDYYQQALAINQELGDLRRDNVATNFTNIGHVYHSQGEYDRANEYFQQALAISKDIGYRS 817

Query: 195  CPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGM 254
                I   IG      G+  +A + FQ++L +  E                   G R G 
Sbjct: 818  QEANILNNIGSVYDSQGEYDRANEYFQQSLAISQE------------------IGDRSGE 859

Query: 255  EKMQRAFEIYPYC----AMALNYLANHFFFTGQHFLVEQLTE-TALAVTNHGPTKSHSYY 309
                       Y     A AL Y   H     Q  L ++  E T L              
Sbjct: 860  STTLNNIGFIDYARGEYAQALEYF--HQALVIQQDLGKRFEEATTLG------------- 904

Query: 310  NLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVL 369
            N+   Y S GDY KA  Y+  S+K                 ++  +GD R    N   + 
Sbjct: 905  NIGTVYISWGDYAKALNYHQQSLK-----------------IKQDIGDKRGVGANLNNIG 947

Query: 370  EIYPDNCE--------------------------TLKALGHIYVQLGQIEKAQELLRKAA 403
             IY D  E                           L+ +G +Y   G+  KA E  +KA 
Sbjct: 948  RIYTDQGEYERGLKYLQQALAIQQEIGDRPTEAANLRNIGTVYSHWGKYPKALEYHQKAL 1007

Query: 404  KI--DPRDAQA-----------FIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPI-E 449
             I  D  D              ++DLG      D   ALD F  A+ +  K G +  I E
Sbjct: 1008 AIRQDIGDQAGIGTTYNSIGANYLDLG------DYSQALDYFNQAQAIFTKIGAKEGIAE 1061

Query: 450  VLNNIGVIHFEKGEFESAHQSFKDAL 475
             L NIG ++ ++  +  + ++++ +L
Sbjct: 1062 TLTNIGTVYQKQENYPKSLENYQQSL 1087


>gi|66347871|ref|NP_001018116.1| O-linked N-acetylglucosamine transferase isoform 3 [Danio rerio]
 gi|56967376|gb|AAW31872.1| O-GlcNAc transferase variant 3 [Danio rerio]
          Length = 1046

 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 87/391 (22%), Positives = 166/391 (42%), Gaps = 34/391 (8%)

Query: 93  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 152
           Y+ LG +  ++ + +E    A ++Y  A R+       ++     L+A G++E A  A+ 
Sbjct: 92  YSNLGNVYKERGQLQE----AIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 147

Query: 153 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 210
             L+ + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 148 SALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIETQPNFAVAWS-NLGCVFNAQ 204

Query: 211 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 270
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 205 GEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAGYLRALSLSPNHAVV 261

Query: 271 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 330
              LA  ++  G   L       A+ +  H P    +Y NLA +   KG+  +A   Y  
Sbjct: 262 HGNLACVYYEQGLIDLAIDTYRRAIELQPHFPD---AYCNLANALKEKGNVSEAEECYNT 318

Query: 331 SVKEINKPHEFIFPYYG-----LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 385
           +++        + P +      L  ++ + G+   A+  + K LE++P+       L  +
Sbjct: 319 ALR--------LCPTHADSLNNLANIKREQGNIEEAVQLYRKALEVFPEFAAAHSNLASV 370

Query: 386 YVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGE 444
             Q G++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +      
Sbjct: 371 LQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA- 429

Query: 445 EVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
               +  +N+  IH + G    A  S++ AL
Sbjct: 430 ----DAHSNLASIHKDSGNIPEAIASYRTAL 456



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 103/496 (20%), Positives = 194/496 (39%), Gaps = 64/496 (12%)

Query: 142 GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 201
           G+ E A      +   + DN   LL  + + F   R   S  F   A++ +P    A   
Sbjct: 35  GDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPMLAEAYS- 93

Query: 202 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 261
            +G    + GQL +A + ++ AL+L P+ ++  + LA   + A +  G    ++    A 
Sbjct: 94  NLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEG---AVQAYVSAL 150

Query: 262 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 319
           +  P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G
Sbjct: 151 QYNPDLYCVRS--DLGNLLKALGR---LEEAKACYLKAIETQPNFAVAWSNLGCVFNAQG 205

Query: 320 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 379
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++    
Sbjct: 206 EIWLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVAGYLRALSLSPNHAVVH 262

Query: 380 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLI-SSDTGAALDAFKTARTL 438
             L  +Y + G I+ A +  R+A ++ P    A+ +L   L    +   A + + TA  L
Sbjct: 263 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGNVSEAEECYNTALRL 322

Query: 439 LKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASAS 498
                +      LNN+  I  E+G  E A Q ++ AL                       
Sbjct: 323 CPTHADS-----LNNLANIKREQGNIEEAVQLYRKAL----------------------- 354

Query: 499 MLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDY 558
                  ++F  F                  NLA +L+Q      A + Y+  +     +
Sbjct: 355 -------EVFPEF-------------AAAHSNLASVLQQQGKLQEALMHYKEAIRISPTF 394

Query: 559 VDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRA 618
            DAY  +    K   ++Q +++    A+++N  + +A S L  +   + +  +A  ++R 
Sbjct: 395 ADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRT 454

Query: 619 ASD-ATDGKDSYATLS 633
           A     D  D+Y  L+
Sbjct: 455 ALKLKPDFPDAYCNLA 470


>gi|301111123|ref|XP_002904641.1| UDP-N-acetylglucosamine-peptide N-acetylglucosaminyltransferase,
           putative [Phytophthora infestans T30-4]
 gi|262095958|gb|EEY54010.1| UDP-N-acetylglucosamine-peptide N-acetylglucosaminyltransferase,
           putative [Phytophthora infestans T30-4]
          Length = 579

 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 61/251 (24%), Positives = 111/251 (44%), Gaps = 22/251 (8%)

Query: 176 GRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV 235
           G++  + + Y RA+Q++P    A     G    K+ +   A + + +AL++DP N  AL 
Sbjct: 237 GKFQAAADEYSRAIQLNPQHFKAF-FNRGFVYDKIRRFDAAVEDYTQALKMDPHNAFALY 295

Query: 236 ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETAL 295
              +   ++ +  G    +    RA E+ P          N  F+  + F   +     L
Sbjct: 296 NRGISLDRSGDYQG---ALTDFTRAIELLP---------TNADFYHNRGFCHRKQGNFEL 343

Query: 296 AVTNHG------PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLG 349
           A+ ++       P    S YN A SY   G Y++A   Y A+++   +P E    Y+  G
Sbjct: 344 AIADYSRAIEFNPNHFKSLYNRAYSYDKLGRYQEAAQDYTAALRV--EP-ENANAYHNRG 400

Query: 350 QVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRD 409
               K+ D   A+ +F++ + + P +  +  + G  Y QLG+ ++A +    A  +DPR 
Sbjct: 401 STYDKMRDTTRAIADFDRAIALQPRSVSSYNSRGLCYDQLGRHQEALQDFALALTLDPRS 460

Query: 410 AQAFIDLGELL 420
           A  + + G  L
Sbjct: 461 AVFYHNRGYCL 471



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 67/306 (21%), Positives = 127/306 (41%), Gaps = 10/306 (3%)

Query: 105 EKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPA 164
           +K   F  A + Y +A ++D H       +G  L   G+ + A + F   +E    N   
Sbjct: 268 DKIRRFDAAVEDYTQALKMDPHNAFALYNRGISLDRSGDYQGALTDFTRAIELLPTNADF 327

Query: 165 LLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRAL 224
              +      +G +  ++  Y RA++ +P+   ++         KLG+  +A Q +  AL
Sbjct: 328 YHNRGFCHRKQGNFELAIADYSRAIEFNPNHFKSL-YNRAYSYDKLGRYQEAAQDYTAAL 386

Query: 225 QLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQH 284
           +++PEN  A           ++     + +    RA  + P    + N     +   G+H
Sbjct: 387 RVEPENANAYHNRGST---YDKMRDTTRAIADFDRAIALQPRSVSSYNSRGLCYDQLGRH 443

Query: 285 FLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFP 344
              E L + ALA+T   P  +  Y+N      + G +E+A   Y +++    +P   +  
Sbjct: 444 --QEALQDFALALT-LDPRSAVFYHNRGYCLRNMGRFEEAVQDYSSALAL--EPRN-VAA 497

Query: 345 YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAK 404
           Y   G    KL  F+ A+ ++   L I P N  TL    +   ++  IE+A     +   
Sbjct: 498 YNNRGYALRKLRRFQEAVADYTTALTIDPQNTRTLSNRAYSLAKMQHIEEAIADYSQILT 557

Query: 405 IDPRDA 410
           +DP+++
Sbjct: 558 LDPQNS 563



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 41/175 (23%), Positives = 82/175 (46%), Gaps = 9/175 (5%)

Query: 302 PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSA 361
           P  + + YN   S    GDY+ A   +  +++ +    +F   Y+  G    K G+F  A
Sbjct: 288 PHNAFALYNRGISLDRSGDYQGALTDFTRAIELLPTNADF---YHNRGFCHRKQGNFELA 344

Query: 362 LTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLI 421
           + ++ + +E  P++ ++L    + Y +LG+ ++A +    A +++P +A A+ + G    
Sbjct: 345 IADYSRAIEFNPNHFKSLYNRAYSYDKLGRYQEAAQDYTAALRVEPENANAYHNRGSTYD 404

Query: 422 S-SDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
              DT  A+  F  A  L  ++     +   N+ G+ + + G  + A Q F  AL
Sbjct: 405 KMRDTTRAIADFDRAIALQPRS-----VSSYNSRGLCYDQLGRHQEALQDFALAL 454



 Score = 40.0 bits (92), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 64/317 (20%), Positives = 122/317 (38%), Gaps = 22/317 (6%)

Query: 103 QREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNV 162
           Q  +E  F  A   Y++A +++      +  +G +       + A   +   L+ D  N 
Sbjct: 232 QYRQEGKFQAAADEYSRAIQLNPQHFKAFFNRGFVYDKIRRFDAAVEDYTQALKMDPHNA 291

Query: 163 PALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQR 222
            AL  +       G Y  +L  + RA+++ P+         G C  K G    A   + R
Sbjct: 292 FALYNRGISLDRSGDYQGALTDFTRAIELLPTNADFYH-NRGFCHRKQGNFELAIADYSR 350

Query: 223 ALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTG 282
           A++ +P + ++L          N A    K + + Q A + Y          AN +   G
Sbjct: 351 AIEFNPNHFKSLY---------NRAYSYDK-LGRYQEAAQDYTAALRVEPENANAYHNRG 400

Query: 283 QHFLVEQLTETALAVTNHG------PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEIN 336
             +  +++ +T  A+ +        P    SY +    Y   G +++A L   A    ++
Sbjct: 401 STY--DKMRDTTRAIADFDRAIALQPRSVSSYNSRGLCYDQLGRHQEA-LQDFALALTLD 457

Query: 337 KPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQ 396
            P   +F Y+  G     +G F  A+ ++   L + P N       G+   +L + ++A 
Sbjct: 458 -PRSAVF-YHNRGYCLRNMGRFEEAVQDYSSALALEPRNVAAYNNRGYALRKLRRFQEAV 515

Query: 397 ELLRKAAKIDPRDAQAF 413
                A  IDP++ +  
Sbjct: 516 ADYTTALTIDPQNTRTL 532


>gi|449267896|gb|EMC78787.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
           110 kDa subunit, partial [Columba livia]
          Length = 1036

 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 102/478 (21%), Positives = 191/478 (39%), Gaps = 27/478 (5%)

Query: 142 GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 201
           G+ E A      +   + DN   LL  + + F   R   S  F   A++ +P    A   
Sbjct: 26  GDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYS- 84

Query: 202 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 261
            +G    + GQL +A + ++ AL+L P+ ++  + LA   + A +  G    ++    A 
Sbjct: 85  NLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEG---AVQAYVSAL 141

Query: 262 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 319
           +  P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G
Sbjct: 142 QYNPDLYCVRS--DLGNLLKALGR---LEEAKACYLKAIETQPNFAVAWSNLGCVFNAQG 196

Query: 320 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 379
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++    
Sbjct: 197 EIWLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVH 253

Query: 380 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLL 439
             L  +Y + G I+ A +  R+A ++ P    A+ +L   L   + G+ ++A +   T L
Sbjct: 254 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANAL--KEKGSVVEAEECYNTAL 311

Query: 440 KKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASM 499
           +        + LNN+  I  E+G  E A + ++ AL       +       +   AS   
Sbjct: 312 RLCPTHA--DSLNNLANIKREQGNIEEAVRLYRKAL------EVFPEFAAAHSNLASVLQ 363

Query: 500 LQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYV 559
            Q K  +    ++     + +         N+   L+++ D   A   Y   +     + 
Sbjct: 364 QQGKLQEALMHYKEA---IRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA 420

Query: 560 DAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFR 617
           DA+  LA+I K   N+  +I     ALK+   +P+A   L        DW    E  +
Sbjct: 421 DAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMK 478



 Score = 64.7 bits (156), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 86/386 (22%), Positives = 164/386 (42%), Gaps = 24/386 (6%)

Query: 93  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 152
           Y+ LG +  ++ + +E    A ++Y  A R+       ++     L+A G++E A  A+ 
Sbjct: 83  YSNLGNVYKERGQLQE----AIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 138

Query: 153 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 210
             L+ + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 139 SALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIETQPNFAVAWS-NLGCVFNAQ 195

Query: 211 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 270
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 196 GEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAAYLRALSLSPNHAVV 252

Query: 271 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 330
              LA  ++  G   L       A+ +  H P    +Y NLA +   KG   +A   Y  
Sbjct: 253 HGNLACVYYEQGLIDLAIDTYRRAIELQPHFPD---AYCNLANALKEKGSVVEAEECYNT 309

Query: 331 SVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLG 390
           +++      + +     L  ++ + G+   A+  + K LE++P+       L  +  Q G
Sbjct: 310 ALRLCPTHADSL---NNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQG 366

Query: 391 QIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGEEVPIE 449
           ++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +          +
Sbjct: 367 KLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA-----D 421

Query: 450 VLNNIGVIHFEKGEFESAHQSFKDAL 475
             +N+  IH + G    A  S++ AL
Sbjct: 422 AHSNLASIHKDSGNIPEAIASYRTAL 447


>gi|13775066|gb|AAK39123.1|AF363030_1 UDP-N-acetylglucosaminyltransferase [Mus musculus]
          Length = 1046

 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 104/479 (21%), Positives = 189/479 (39%), Gaps = 29/479 (6%)

Query: 142 GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 201
           G+ E A      +   + DN   LL  + + F   R   S  F   A++ +P    A   
Sbjct: 35  GDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYS- 93

Query: 202 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 261
            +G    + GQL +A + ++ AL+L P+ ++  + LA   + A +  G    ++    A 
Sbjct: 94  NLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEG---AVQAYVSAL 150

Query: 262 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 319
           +  P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G
Sbjct: 151 QYNPDLYCVRS--DLGNLLKALGR---LEEAKACYLKAIETQPNFAVAWSNLGCVFNAQG 205

Query: 320 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 379
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++    
Sbjct: 206 EIWLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVH 262

Query: 380 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGA-ALDAFKTARTL 438
             L  +Y + G I+ A +  R+A ++ P    A+ +L   L    + A A D + TA  L
Sbjct: 263 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRL 322

Query: 439 LKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASAS 498
                +      LNN+  I  E+G  E A + ++ AL       +       +   AS  
Sbjct: 323 CPTHADS-----LNNLANIKREQGNIEEAVRLYRKAL------EVFPEFAAAHSNLASVL 371

Query: 499 MLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDY 558
             Q K  +    ++     + +         N+   L+++ D   A   Y   +     +
Sbjct: 372 QQQGKLQEALMHYKEA---IRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAF 428

Query: 559 VDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFR 617
            DA+  LA+I K   N+  +I     ALK+   +P+A   L        DW    E  +
Sbjct: 429 ADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMK 487



 Score = 64.7 bits (156), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 86/386 (22%), Positives = 164/386 (42%), Gaps = 24/386 (6%)

Query: 93  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 152
           Y+ LG +  ++ + +E    A ++Y  A R+       ++     L+A G++E A  A+ 
Sbjct: 92  YSNLGNVYKERGQLQE----AIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 147

Query: 153 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 210
             L+ + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 148 SALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIETQPNFAVAWS-NLGCVFNAQ 204

Query: 211 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 270
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 205 GEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAAYLRALSLSPNHAVV 261

Query: 271 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 330
              LA  ++  G   L       A+ +  H P    +Y NLA +   KG   +A   Y  
Sbjct: 262 HGNLACVYYEQGLIDLAIDTYRRAIELQPHFPD---AYCNLANALKEKGSVAEAEDCYNT 318

Query: 331 SVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLG 390
           +++      + +     L  ++ + G+   A+  + K LE++P+       L  +  Q G
Sbjct: 319 ALRLCPTHADSL---NNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQG 375

Query: 391 QIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGEEVPIE 449
           ++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +          +
Sbjct: 376 KLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA-----D 430

Query: 450 VLNNIGVIHFEKGEFESAHQSFKDAL 475
             +N+  IH + G    A  S++ AL
Sbjct: 431 AHSNLASIHKDSGNIPEAIASYRTAL 456



 Score = 42.0 bits (97), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 76/347 (21%), Positives = 140/347 (40%), Gaps = 57/347 (16%)

Query: 278 FFFTGQHFLVEQLTETA----LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK 333
              +  HF   +L  +A    LA+    P  + +Y NL   Y  +G  ++A  +Y  +++
Sbjct: 59  LLLSSIHFQCRRLDRSAHFSTLAI-KQNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALR 117

Query: 334 EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIE 393
              KP +FI  Y  L    +  GD   A+  +   L+  PD       LG++   LG++E
Sbjct: 118 L--KP-DFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLE 174

Query: 394 KAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNN 453
           +A+    KA +  P  A A+ +LG                    +    GE         
Sbjct: 175 EAKACYLKAIETQPNFAVAWSNLG-------------------CVFNAQGEIW------- 208

Query: 454 IGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVID-ASASMLQFKDMQLFHRFE 512
           + + HFEK    +   +F DA     ++ L +   +  + D A A+ L+   +       
Sbjct: 209 LAIHHFEKAV--TLDPNFLDA-----YINLGNVLKEARIFDRAVAAYLRALSLS------ 255

Query: 513 NDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKAR 572
              NH  +  N   V +    L++   DT      YR  +     + DAY  LA   K +
Sbjct: 256 --PNHAVVHGNLACVYYEQG-LIDLAIDT------YRRAIELQPHFPDAYCNLANALKEK 306

Query: 573 NNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAA 619
            ++  + +  N AL++   + ++L+ L +++ +  +  +A   +R A
Sbjct: 307 GSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKA 353


>gi|46909607|ref|NP_631883.2| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
           110 kDa subunit [Mus musculus]
 gi|146325019|sp|Q8CGY8.2|OGT1_MOUSE RecName: Full=UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit;
           AltName: Full=O-GlcNAc transferase subunit p110;
           AltName: Full=O-linked N-acetylglucosamine transferase
           110 kDa subunit; Short=OGT
 gi|34785719|gb|AAH57319.1| O-linked N-acetylglucosamine (GlcNAc) transferase
           (UDP-N-acetylglucosamine:polypeptide-N-
           acetylglucosaminyl transferase) [Mus musculus]
 gi|148682191|gb|EDL14138.1| O-linked N-acetylglucosamine (GlcNAc) transferase
           (UDP-N-acetylglucosamine:polypeptide-N-
           acetylglucosaminyl transferase), isoform CRA_b [Mus
           musculus]
          Length = 1046

 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 104/479 (21%), Positives = 189/479 (39%), Gaps = 29/479 (6%)

Query: 142 GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 201
           G+ E A      +   + DN   LL  + + F   R   S  F   A++ +P    A   
Sbjct: 35  GDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYS- 93

Query: 202 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 261
            +G    + GQL +A + ++ AL+L P+ ++  + LA   + A +  G    ++    A 
Sbjct: 94  NLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEG---AVQAYVSAL 150

Query: 262 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 319
           +  P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G
Sbjct: 151 QYNPDLYCVRS--DLGNLLKALGR---LEEAKACYLKAIETQPNFAVAWSNLGCVFNAQG 205

Query: 320 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 379
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++    
Sbjct: 206 EIWLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVH 262

Query: 380 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGA-ALDAFKTARTL 438
             L  +Y + G I+ A +  R+A ++ P    A+ +L   L    + A A D + TA  L
Sbjct: 263 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRL 322

Query: 439 LKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASAS 498
                +      LNN+  I  E+G  E A + ++ AL       +       +   AS  
Sbjct: 323 CPTHADS-----LNNLANIKREQGNIEEAVRLYRKAL------EVFPEFAAAHSNLASVL 371

Query: 499 MLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDY 558
             Q K  +    ++     + +         N+   L+++ D   A   Y   +     +
Sbjct: 372 QQQGKLQEALMHYKEA---IRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAF 428

Query: 559 VDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFR 617
            DA+  LA+I K   N+  +I     ALK+   +P+A   L        DW    E  +
Sbjct: 429 ADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMK 487



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 86/386 (22%), Positives = 164/386 (42%), Gaps = 24/386 (6%)

Query: 93  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 152
           Y+ LG +  ++ + +E    A ++Y  A R+       ++     L+A G++E A  A+ 
Sbjct: 92  YSNLGNVYKERGQLQE----AIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 147

Query: 153 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 210
             L+ + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 148 SALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIETQPNFAVAWS-NLGCVFNAQ 204

Query: 211 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 270
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 205 GEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAAYLRALSLSPNHAVV 261

Query: 271 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 330
              LA  ++  G   L       A+ +  H P    +Y NLA +   KG   +A   Y  
Sbjct: 262 HGNLACVYYEQGLIDLAIDTYRRAIELQPHFPD---AYCNLANALKEKGSVAEAEDCYNT 318

Query: 331 SVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLG 390
           +++      + +     L  ++ + G+   A+  + K LE++P+       L  +  Q G
Sbjct: 319 ALRLCPTHADSL---NNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQG 375

Query: 391 QIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGEEVPIE 449
           ++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +          +
Sbjct: 376 KLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA-----D 430

Query: 450 VLNNIGVIHFEKGEFESAHQSFKDAL 475
             +N+  IH + G    A  S++ AL
Sbjct: 431 AHSNLASIHKDSGNIPEAIASYRTAL 456



 Score = 42.0 bits (97), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 76/347 (21%), Positives = 140/347 (40%), Gaps = 57/347 (16%)

Query: 278 FFFTGQHFLVEQLTETA----LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK 333
              +  HF   +L  +A    LA+    P  + +Y NL   Y  +G  ++A  +Y  +++
Sbjct: 59  LLLSSIHFQCRRLDRSAHFSTLAI-KQNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALR 117

Query: 334 EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIE 393
              KP +FI  Y  L    +  GD   A+  +   L+  PD       LG++   LG++E
Sbjct: 118 L--KP-DFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLE 174

Query: 394 KAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNN 453
           +A+    KA +  P  A A+ +LG                    +    GE         
Sbjct: 175 EAKACYLKAIETQPNFAVAWSNLG-------------------CVFNAQGEIW------- 208

Query: 454 IGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVID-ASASMLQFKDMQLFHRFE 512
           + + HFEK    +   +F DA     ++ L +   +  + D A A+ L+   +       
Sbjct: 209 LAIHHFEKAV--TLDPNFLDA-----YINLGNVLKEARIFDRAVAAYLRALSLS------ 255

Query: 513 NDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKAR 572
              NH  +  N   V +    L++   DT      YR  +     + DAY  LA   K +
Sbjct: 256 --PNHAVVHGNLACVYYEQG-LIDLAIDT------YRRAIELQPHFPDAYCNLANALKEK 306

Query: 573 NNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAA 619
            ++  + +  N AL++   + ++L+ L +++ +  +  +A   +R A
Sbjct: 307 GSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKA 353


>gi|3914191|sp|P56558.1|OGT1_RAT RecName: Full=UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit;
           AltName: Full=O-GlcNAc transferase subunit p110;
           AltName: Full=O-linked N-acetylglucosamine transferase
           110 kDa subunit; Short=OGT
 gi|1931579|gb|AAC53121.1| O-GlcNAc transferase, p110 subunit [Rattus norvegicus]
          Length = 1036

 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 104/479 (21%), Positives = 189/479 (39%), Gaps = 29/479 (6%)

Query: 142 GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 201
           G+ E A      +   + DN   LL  + + F   R   S  F   A++ +P    A   
Sbjct: 25  GDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYS- 83

Query: 202 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 261
            +G    + GQL +A + ++ AL+L P+ ++  + LA   + A +  G    ++    A 
Sbjct: 84  NLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEG---AVQAYVSAL 140

Query: 262 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 319
           +  P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G
Sbjct: 141 QYNPDLYCVRS--DLGNLLKALGR---LEEAKACYLKAIETQPNFAVAWSNLGCVFNAQG 195

Query: 320 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 379
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++    
Sbjct: 196 EIWLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVH 252

Query: 380 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGA-ALDAFKTARTL 438
             L  +Y + G I+ A +  R+A ++ P    A+ +L   L    + A A D + TA  L
Sbjct: 253 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRL 312

Query: 439 LKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASAS 498
                +      LNN+  I  E+G  E A + ++ AL       +       +   AS  
Sbjct: 313 CPTHADS-----LNNLANIKREQGNIEEAVRLYRKAL------EVFPEFAAAHSNLASVL 361

Query: 499 MLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDY 558
             Q K  +    ++     + +         N+   L+++ D   A   Y   +     +
Sbjct: 362 QQQGKLQEALMHYKEA---IRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAF 418

Query: 559 VDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFR 617
            DA+  LA+I K   N+  +I     ALK+   +P+A   L        DW    E  +
Sbjct: 419 ADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMK 477



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 86/386 (22%), Positives = 164/386 (42%), Gaps = 24/386 (6%)

Query: 93  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 152
           Y+ LG +  ++ + +E    A ++Y  A R+       ++     L+A G++E A  A+ 
Sbjct: 82  YSNLGNVYKERGQLQE----AIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 137

Query: 153 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 210
             L+ + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 138 SALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIETQPNFAVAWS-NLGCVFNAQ 194

Query: 211 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 270
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 195 GEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAAYLRALSLSPNHAVV 251

Query: 271 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 330
              LA  ++  G   L       A+ +  H P    +Y NLA +   KG   +A   Y  
Sbjct: 252 HGNLACVYYEQGLIDLAIDTYRRAIELQPHFPD---AYCNLANALKEKGSVAEAEDCYNT 308

Query: 331 SVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLG 390
           +++      + +     L  ++ + G+   A+  + K LE++P+       L  +  Q G
Sbjct: 309 ALRLCPTHADSL---NNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQG 365

Query: 391 QIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGEEVPIE 449
           ++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +          +
Sbjct: 366 KLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA-----D 420

Query: 450 VLNNIGVIHFEKGEFESAHQSFKDAL 475
             +N+  IH + G    A  S++ AL
Sbjct: 421 AHSNLASIHKDSGNIPEAIASYRTAL 446



 Score = 42.4 bits (98), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 76/347 (21%), Positives = 141/347 (40%), Gaps = 57/347 (16%)

Query: 278 FFFTGQHFLVEQLTETA----LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK 333
              +  HF   +L  +A    LA+  + P  + +Y NL   Y  +G  ++A  +Y  +++
Sbjct: 49  LLLSSIHFQCRRLDRSAHFSTLAIKQN-PLLAEAYSNLGNVYKERGQLQEAIEHYRHALR 107

Query: 334 EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIE 393
              KP +FI  Y  L    +  GD   A+  +   L+  PD       LG++   LG++E
Sbjct: 108 L--KP-DFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLE 164

Query: 394 KAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNN 453
           +A+    KA +  P  A A+ +LG                    +    GE         
Sbjct: 165 EAKACYLKAIETQPNFAVAWSNLG-------------------CVFNAQGEIW------- 198

Query: 454 IGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVID-ASASMLQFKDMQLFHRFE 512
           + + HFEK    +   +F DA     ++ L +   +  + D A A+ L+   +       
Sbjct: 199 LAIHHFEKAV--TLDPNFLDA-----YINLGNVLKEARIFDRAVAAYLRALSLS------ 245

Query: 513 NDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKAR 572
              NH  +  N   V +    L++   DT      YR  +     + DAY  LA   K +
Sbjct: 246 --PNHAVVHGNLACVYYEQG-LIDLAIDT------YRRAIELQPHFPDAYCNLANALKEK 296

Query: 573 NNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAA 619
            ++  + +  N AL++   + ++L+ L +++ +  +  +A   +R A
Sbjct: 297 GSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKA 343


>gi|282900764|ref|ZP_06308705.1| hypothetical protein CRC_02125 [Cylindrospermopsis raciborskii
           CS-505]
 gi|281194348|gb|EFA69304.1| hypothetical protein CRC_02125 [Cylindrospermopsis raciborskii
           CS-505]
          Length = 1024

 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 79/364 (21%), Positives = 157/364 (43%), Gaps = 24/364 (6%)

Query: 117 YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 176
           YN+A +I+ +    +  +G      G+ + A   +   ++ + +   A   +       G
Sbjct: 283 YNQAIQINPNYALAYYNRGNARSELGDKQGAIVDYNQAIQINPNYADAYYNRGIARSELG 342

Query: 177 RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVA 236
               ++  Y +A+Q++P+   A     G+ R +LG    A   + +A+Q++P N +A   
Sbjct: 343 DKQGAIVDYNQAIQINPNDADAYN-NRGIARSELGDKQGAIVDYNQAIQINPNNADAYNN 401

Query: 237 LAVMDLQANEAAGIRKG-MEKMQRAFEIYPYCAMALNY--LANHFFFTGQHFLVEQLTET 293
             +    A    G ++G +    +A +I P  A A N   LA       Q  +V+     
Sbjct: 402 RGI----ARSELGDKQGAIVDYNQAIQINPNYAYAYNNRGLARSELGDKQGAIVD--YNQ 455

Query: 294 ALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQL 353
           A+ +    P  +++YYN   +    GD + A + Y  ++ +IN    +   Y G G  + 
Sbjct: 456 AIQIN---PNNAYAYYNRGLARSELGDKQGAIVDYNQAI-QINP--NYADAYIGRGNARS 509

Query: 354 KLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAF 413
           +LGD + A+ ++ + ++I P+  +     G+   +LG  + A     +A +I+P DA A+
Sbjct: 510 ELGDKQGAIVDYNQAIQINPNYADAYIGRGNARSELGDKQGAIVDYNQAIQINPNDADAY 569

Query: 414 IDLG--ELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSF 471
            + G     +    GA +D  +  +     A      +  NN G+   E G+ + A   +
Sbjct: 570 YNRGLARSELGDKQGAIVDYNQAIQINPNNA------DAYNNRGIARSELGDKQGAIVDY 623

Query: 472 KDAL 475
             A+
Sbjct: 624 NQAI 627



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 64/272 (23%), Positives = 124/272 (45%), Gaps = 31/272 (11%)

Query: 185  YKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV--ALAVMDL 242
            Y +A+Q++P+   +     G+ R +LG    A   + +A+Q++P + +A     LA  +L
Sbjct: 759  YTQAIQINPNYADSY-YNRGIARSELGDKQGAIVDYNQAIQINPNDADAYYNRGLARSEL 817

Query: 243  QANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG- 301
               + A     +    +A +I P  A       + ++  G      +L +   A+ ++  
Sbjct: 818  GDKQGA-----IVDYNQAIQINPNNA-------DSYYNRG--IARSELGDKQGAIVDYNQ 863

Query: 302  -----PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLG 356
                 P  + SYYN   +    GD + A + Y  ++ +IN    +   Y G G  + +LG
Sbjct: 864  AIQINPNYADSYYNRGIARSELGDKQGAIVDYNQAI-QINP--NYADAYIGRGNARSELG 920

Query: 357  DFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDL 416
            D + A+ ++ + ++I P+  +     G    +LG  + A     +A +I+P DA A+ + 
Sbjct: 921  DKQGAIVDYNQAIQINPNYADAYNNRGIARSELGDKQGAIVDYNQAIQINPNDADAYYNR 980

Query: 417  GELLISSDTG---AALDAFKTARTLLKKAGEE 445
            G  L  S+ G    A   F+TA  L ++ G++
Sbjct: 981  G--LARSELGDKQGARGDFQTAARLYQQQGKQ 1010



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 80/374 (21%), Positives = 159/374 (42%), Gaps = 50/374 (13%)

Query: 52  KQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFI 111
           KQG +  + Q ++      I+  YAD  Y R       G+  + LG       +K+   +
Sbjct: 310 KQGAIVDYNQAIQ------INPNYADAYYNR-------GIARSELG-------DKQGAIV 349

Query: 112 LATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACV 171
                YN+A +I+ ++   +  +G      G+ + A   +   ++ + +N  A   +   
Sbjct: 350 D----YNQAIQINPNDADAYNNRGIARSELGDKQGAIVDYNQAIQINPNNADAYNNRGIA 405

Query: 172 EFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENV 231
               G    ++  Y +A+Q++P+   A     GL R +LG    A   + +A+Q++P N 
Sbjct: 406 RSELGDKQGAIVDYNQAIQINPNYAYAYN-NRGLARSELGDKQGAIVDYNQAIQINPNNA 464

Query: 232 EALV--ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQ 289
            A     LA  +L   + A     +    +A +I P  A A         + G+     +
Sbjct: 465 YAYYNRGLARSELGDKQGA-----IVDYNQAIQINPNYADA---------YIGRGNARSE 510

Query: 290 LTETALAVTNHG------PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIF 343
           L +   A+ ++       P  + +Y     +    GD + A + Y  ++ +IN P++   
Sbjct: 511 LGDKQGAIVDYNQAIQINPNYADAYIGRGNARSELGDKQGAIVDYNQAI-QIN-PND-AD 567

Query: 344 PYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAA 403
            YY  G  + +LGD + A+ ++ + ++I P+N +     G    +LG  + A     +A 
Sbjct: 568 AYYNRGLARSELGDKQGAIVDYNQAIQINPNNADAYNNRGIARSELGDKQGAIVDYNQAI 627

Query: 404 KIDPRDAQAFIDLG 417
           +I+P  A ++ + G
Sbjct: 628 QINPNYADSYYNRG 641



 Score = 48.9 bits (115), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 69/323 (21%), Positives = 138/323 (42%), Gaps = 18/323 (5%)

Query: 99  IETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEAD 158
           +E      EE+ I    Y  K+S +  +    +  +   L   G+ + A   +   ++ +
Sbjct: 199 VEGGGTTPEEYGIPINAY--KSSSVYSNNAEFYFNRAYKLYESGDKQGAIVDYTQAIQIN 256

Query: 159 RDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQ 218
            +   A +G+     + G    ++  Y +A+Q++P+   A     G  R +LG    A  
Sbjct: 257 PNYALAYIGRGNARSDLGDKQGAIVDYNQAIQINPNYALAY-YNRGNARSELGDKQGAIV 315

Query: 219 AFQRALQLDPENVEALVALAVMDLQANEAAGIRKG-MEKMQRAFEIYPYCAMALNY--LA 275
            + +A+Q++P   +A     +    A    G ++G +    +A +I P  A A N   +A
Sbjct: 316 DYNQAIQINPNYADAYYNRGI----ARSELGDKQGAIVDYNQAIQINPNDADAYNNRGIA 371

Query: 276 NHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEI 335
                  Q  +V+     A+ +    P  + +Y N   +    GD + A + Y  ++ +I
Sbjct: 372 RSELGDKQGAIVD--YNQAIQIN---PNNADAYNNRGIARSELGDKQGAIVDYNQAI-QI 425

Query: 336 NKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKA 395
           N  + + +   GL   + +LGD + A+ ++ + ++I P+N       G    +LG  + A
Sbjct: 426 NPNYAYAYNNRGL--ARSELGDKQGAIVDYNQAIQINPNNAYAYYNRGLARSELGDKQGA 483

Query: 396 QELLRKAAKIDPRDAQAFIDLGE 418
                +A +I+P  A A+I  G 
Sbjct: 484 IVDYNQAIQINPNYADAYIGRGN 506



 Score = 40.0 bits (92), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 69/331 (20%), Positives = 128/331 (38%), Gaps = 49/331 (14%)

Query: 308 YYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEK 367
           Y+N A   +  GD + A + Y  ++ +IN    +   Y G G  +  LGD + A+ ++ +
Sbjct: 229 YFNRAYKLYESGDKQGAIVDYTQAI-QINP--NYALAYIGRGNARSDLGDKQGAIVDYNQ 285

Query: 368 VLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG--ELLISSDT 425
            ++I P+        G+   +LG  + A     +A +I+P  A A+ + G     +    
Sbjct: 286 AIQINPNYALAYYNRGNARSELGDKQGAIVDYNQAIQINPNYADAYYNRGIARSELGDKQ 345

Query: 426 GAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL---------- 475
           GA +D  +  +     A      +  NN G+   E G+ + A   +  A+          
Sbjct: 346 GAIVDYNQAIQINPNDA------DAYNNRGIARSELGDKQGAIVDYNQAIQINPNNADAY 399

Query: 476 -GDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDG-----------------NH 517
              GI  + L  K    ++D + + +Q  +    + + N G                   
Sbjct: 400 NNRGIARSELGDKQGA-IVDYNQA-IQI-NPNYAYAYNNRGLARSELGDKQGAIVDYNQA 456

Query: 518 VELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQL 577
           +++  N     +N      ++ D   A V Y   +    +Y DAY+          + Q 
Sbjct: 457 IQINPNNAYAYYNRGLARSELGDKQGAIVDYNQAIQINPNYADAYIGRGNARSELGDKQG 516

Query: 578 SIELVNEALKVNGKYP-------NALSMLGD 601
           +I   N+A+++N  Y        NA S LGD
Sbjct: 517 AIVDYNQAIQINPNYADAYIGRGNARSELGD 547


>gi|66347879|ref|NP_001018117.1| O-linked N-acetylglucosamine transferase isoform 4 [Danio rerio]
 gi|56967378|gb|AAW31873.1| O-GlcNAc transferase variant 4 [Danio rerio]
          Length = 1036

 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 87/391 (22%), Positives = 166/391 (42%), Gaps = 34/391 (8%)

Query: 93  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 152
           Y+ LG +  ++ + +E    A ++Y  A R+       ++     L+A G++E A  A+ 
Sbjct: 82  YSNLGNVYKERGQLQE----AIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 137

Query: 153 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 210
             L+ + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 138 SALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIETQPNFAVAWS-NLGCVFNAQ 194

Query: 211 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 270
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 195 GEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAGYLRALSLSPNHAVV 251

Query: 271 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 330
              LA  ++  G   L       A+ +  H P    +Y NLA +   KG+  +A   Y  
Sbjct: 252 HGNLACVYYEQGLIDLAIDTYRRAIELQPHFPD---AYCNLANALKEKGNVSEAEECYNT 308

Query: 331 SVKEINKPHEFIFPYYG-----LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 385
           +++        + P +      L  ++ + G+   A+  + K LE++P+       L  +
Sbjct: 309 ALR--------LCPTHADSLNNLANIKREQGNIEEAVQLYRKALEVFPEFAAAHSNLASV 360

Query: 386 YVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGE 444
             Q G++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +      
Sbjct: 361 LQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA- 419

Query: 445 EVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
               +  +N+  IH + G    A  S++ AL
Sbjct: 420 ----DAHSNLASIHKDSGNIPEAIASYRTAL 446



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 103/496 (20%), Positives = 194/496 (39%), Gaps = 64/496 (12%)

Query: 142 GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 201
           G+ E A      +   + DN   LL  + + F   R   S  F   A++ +P    A   
Sbjct: 25  GDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPMLAEAYS- 83

Query: 202 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 261
            +G    + GQL +A + ++ AL+L P+ ++  + LA   + A +  G    ++    A 
Sbjct: 84  NLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEG---AVQAYVSAL 140

Query: 262 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 319
           +  P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G
Sbjct: 141 QYNPDLYCVRS--DLGNLLKALGR---LEEAKACYLKAIETQPNFAVAWSNLGCVFNAQG 195

Query: 320 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 379
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++    
Sbjct: 196 EIWLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVAGYLRALSLSPNHAVVH 252

Query: 380 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLI-SSDTGAALDAFKTARTL 438
             L  +Y + G I+ A +  R+A ++ P    A+ +L   L    +   A + + TA  L
Sbjct: 253 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGNVSEAEECYNTALRL 312

Query: 439 LKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASAS 498
                +      LNN+  I  E+G  E A Q ++ AL                       
Sbjct: 313 CPTHADS-----LNNLANIKREQGNIEEAVQLYRKAL----------------------- 344

Query: 499 MLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDY 558
                  ++F  F                  NLA +L+Q      A + Y+  +     +
Sbjct: 345 -------EVFPEF-------------AAAHSNLASVLQQQGKLQEALMHYKEAIRISPTF 384

Query: 559 VDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRA 618
            DAY  +    K   ++Q +++    A+++N  + +A S L  +   + +  +A  ++R 
Sbjct: 385 ADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRT 444

Query: 619 ASD-ATDGKDSYATLS 633
           A     D  D+Y  L+
Sbjct: 445 ALKLKPDFPDAYCNLA 460


>gi|94971629|ref|YP_593677.1| hypothetical protein Acid345_4603 [Candidatus Koribacter versatilis
           Ellin345]
 gi|94553679|gb|ABF43603.1| Tetratricopeptide repeat protein [Candidatus Koribacter versatilis
           Ellin345]
          Length = 722

 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 83/360 (23%), Positives = 160/360 (44%), Gaps = 42/360 (11%)

Query: 170 CVEFNRGRYSD-SLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDP 228
              + R  Y++ ++E Y+ A+   PS    +  G+    ++ G++  A    Q  L+ DP
Sbjct: 87  VATYGRAEYANKAIEEYRAAITADPSS-DYLNAGLADLYWRTGRIRDAVLEAQEILKRDP 145

Query: 229 ENVEA--------LVALAVMDLQANEAAGIRK-GMEKMQRAFEIYPYCAMALNYLANHFF 279
           +NV+A        L +L  M    N++  +++  +E+ +   ++ P        L   + 
Sbjct: 146 KNVDAHRLLGRIYLRSLGDMQSGNNQSRDMQRLAIEQYEEIVKLDPTSVEDHLLLGRLYS 205

Query: 280 FTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPH 339
           ++      E+  +TA+ +    P    +   LA  Y  +GD +KA    ++++ + ++  
Sbjct: 206 YSNDLTKAEKEFKTAVQIQ---PDSEEAVTMLAYLYTQEGDTKKAQ-EVLSNIPDDDRSA 261

Query: 340 EFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELL 399
           +    Y  LG    +  D++ A+  + K + +  +N ++++ L    +  GQ++ A E  
Sbjct: 262 KL---YSTLGYTYEEQKDYKKAIEAYRKAVMLDKENLDSVRGLAQNLLNDGQLDAALEQY 318

Query: 400 RKAAKIDPRDAQAFIDLGELLISSDTG---AALDAFKTARTLLKKAGEEVPIEVLNNIGV 456
           +     DP DAQ++  + E  I    G   AALDA K A  L++ + +E+P     N+ V
Sbjct: 319 KIIVDQDPSDAQSYQHIAE--IDRRNGKFEAALDALKKASALVQDS-QEIPY----NMAV 371

Query: 457 IHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGN 516
           I+  +G +E A  + +  L            TKT   DAS S     +  +F   E  GN
Sbjct: 372 IYEGQGRYEDAINTIQQLL------------TKTDKPDASYSSADRSNRSIF--LERLGN 417



 Score = 40.8 bits (94), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 51/94 (54%), Gaps = 7/94 (7%)

Query: 383 GHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKA 442
           G IY +  + E+A+E  RK    DP++A A   LG +L  +D G  L+    A  +L+KA
Sbjct: 557 GSIYEREKKFEQAEEAFRKVINADPKNAGALNYLGYML--ADRGTRLE---EALGMLRKA 611

Query: 443 GEEVPIE--VLNNIGVIHFEKGEFESAHQSFKDA 474
            +  P     L+++G  +F+ G +E A ++ + A
Sbjct: 612 VQMEPQNGAYLDSLGWAYFKMGNYEQAEENLRKA 645


>gi|315637376|ref|ZP_07892591.1| conserved hypothetical protein [Arcobacter butzleri JV22]
 gi|315478350|gb|EFU69068.1| conserved hypothetical protein [Arcobacter butzleri JV22]
          Length = 503

 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 75/367 (20%), Positives = 155/367 (42%), Gaps = 48/367 (13%)

Query: 106 KEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPAL 165
           K  + + A + Y +  +ID      +     LL  KGE+++A   ++  ++ D  N  A 
Sbjct: 180 KNNNLLEAEKLYKEVIKIDDKYSKAYNNLAFLLSEKGEIDEAEKLYREAIKIDDKNSKAY 239

Query: 166 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 225
              A +   R    ++ + Y+ A+++           + L     G++ +A + ++ A++
Sbjct: 240 NNLAFLLSEREEIDEAEKLYREAIKIDDKNSNTYN-NLALLLANKGEIDEAEKLYKEAIK 298

Query: 226 LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 285
           +D +  +A   LAV+                                         G+  
Sbjct: 299 IDDKYSKAYNNLAVL-------------------------------------LSEKGEMD 321

Query: 286 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 345
             E+L   A+ + +     S++Y NLA    +KG+ ++A   Y  ++K  +K       Y
Sbjct: 322 EAEKLFREAIKIDDKN---SNTYNNLALLLKNKGEIDEAEKLYREAIKIDDKNSN---TY 375

Query: 346 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKI 405
             L  +    G+   A   +++ ++I   N +    L  +  + G+I +A++L R+A KI
Sbjct: 376 NNLALLLANKGEIDEAEKLYKEAIKIDDKNSKAYNNLAFLLSEKGEIGEAEKLYREAIKI 435

Query: 406 DPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFE 465
           D +D+  + +L  LL   + G   +A K  R  +K   ++  ++V NN+ V+   KG+ +
Sbjct: 436 DDKDSDIYYNLALLL--KNKGDIDEAEKLYREAIK--IDDKDLDVYNNLAVLLANKGDID 491

Query: 466 SAHQSFK 472
            A + +K
Sbjct: 492 EAEKLYK 498



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 64/275 (23%), Positives = 132/275 (48%), Gaps = 17/275 (6%)

Query: 203 IGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFE 262
           + L  +K   L +A + ++  +++D +  +A   LA +    +E   I +  +  + A +
Sbjct: 174 LALENHKNNNLLEAEKLYKEVIKIDDKYSKAYNNLAFL---LSEKGEIDEAEKLYREAIK 230

Query: 263 IYPYCAMALNYLANHFFFTGQHFL--VEQLTETALAVTNHGPTKSHSYYNLARSYHSKGD 320
           I    + A N LA  F  + +  +   E+L   A+ + +     S++Y NLA    +KG+
Sbjct: 231 IDDKNSKAYNNLA--FLLSEREEIDEAEKLYREAIKIDDKN---SNTYNNLALLLANKGE 285

Query: 321 YEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLK 380
            ++A   Y  ++K  +K   +   Y  L  +  + G+   A   F + ++I   N  T  
Sbjct: 286 IDEAEKLYKEAIKIDDK---YSKAYNNLAVLLSEKGEMDEAEKLFREAIKIDDKNSNTYN 342

Query: 381 ALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLK 440
            L  +    G+I++A++L R+A KID +++  + +L  LL  ++ G   +A K  +  +K
Sbjct: 343 NLALLLKNKGEIDEAEKLYREAIKIDDKNSNTYNNLALLL--ANKGEIDEAEKLYKEAIK 400

Query: 441 KAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
              ++   +  NN+  +  EKGE   A + +++A+
Sbjct: 401 --IDDKNSKAYNNLAFLLSEKGEIGEAEKLYREAI 433



 Score = 44.7 bits (104), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 83/341 (24%), Positives = 157/341 (46%), Gaps = 41/341 (12%)

Query: 365 FEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSD 424
           +++V++I     +    L  +  + G+I++A++L R+A KID ++++A+ +L  LL  S+
Sbjct: 191 YKEVIKIDDKYSKAYNNLAFLLSEKGEIDEAEKLYREAIKIDDKNSKAYNNLAFLL--SE 248

Query: 425 TGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLL 484
                +A K  R  +K   ++      NN+ ++   KGE + A + +K+A+       + 
Sbjct: 249 REEIDEAEKLYREAIK--IDDKNSNTYNNLALLLANKGEIDEAEKLYKEAI------KID 300

Query: 485 DSKTKTYVIDASASMLQFK-DM----QLFHRFENDGNHVELPWNKVTVLFNLARLLEQIH 539
           D  +K Y  +  A +L  K +M    +LF         +++         NLA LL+   
Sbjct: 301 DKYSKAY--NNLAVLLSEKGEMDEAEKLFRE------AIKIDDKNSNTYNNLALLLKNKG 352

Query: 540 DTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSML 599
           +   A  LYR  +       + Y  LA +   +  +  + +L  EA+K++ K   A + L
Sbjct: 353 EIDEAEKLYREAIKIDDKNSNTYNNLALLLANKGEIDEAEKLYKEAIKIDDKNSKAYNNL 412

Query: 600 GDLELKNDDWVKAKETFRAASDATDGKDS--YATLSLGNWNYFAALRNEKRAPKLEATHL 657
             L  +  +  +A++ +R A    D KDS  Y  L+L        L+N+          +
Sbjct: 413 AFLLSEKGEIGEAEKLYREAI-KIDDKDSDIYYNLAL-------LLKNK--------GDI 456

Query: 658 EKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLF 698
           ++A++LY   I     +L   N   V+LA KG  D ++ L+
Sbjct: 457 DEAEKLYREAIKIDDKDLDVYNNLAVLLANKGDIDEAEKLY 497



 Score = 42.4 bits (98), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 74/312 (23%), Positives = 141/312 (45%), Gaps = 35/312 (11%)

Query: 305 SHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTN 364
           S +Y NLA     KG+ ++A   Y  ++K  +K  +    Y  L  +  +  +   A   
Sbjct: 202 SKAYNNLAFLLSEKGEIDEAEKLYREAIKIDDKNSK---AYNNLAFLLSEREEIDEAEKL 258

Query: 365 FEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSD 424
           + + ++I   N  T   L  +    G+I++A++L ++A KID + ++A+ +L  LL  S+
Sbjct: 259 YREAIKIDDKNSNTYNNLALLLANKGEIDEAEKLYKEAIKIDDKYSKAYNNLAVLL--SE 316

Query: 425 TGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLL 484
            G   +A K  R  +K   ++      NN+ ++   KGE + A + +++A+       + 
Sbjct: 317 KGEMDEAEKLFREAIK--IDDKNSNTYNNLALLLKNKGEIDEAEKLYREAI------KID 368

Query: 485 DSKTKTYVIDASASMLQFKDMQLFHRFEND------GNHVELPWNKVTVLFNLARLLEQI 538
           D  + TY    + ++L      L ++ E D         +++         NLA LL + 
Sbjct: 369 DKNSNTY---NNLALL------LANKGEIDEAEKLYKEAIKIDDKNSKAYNNLAFLLSEK 419

Query: 539 HDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGK----YPN 594
            +   A  LYR  +       D Y  LA + K + ++  + +L  EA+K++ K    Y N
Sbjct: 420 GEIGEAEKLYREAIKIDDKDSDIYYNLALLLKNKGDIDEAEKLYREAIKIDDKDLDVYNN 479

Query: 595 ALSML---GDLE 603
              +L   GD++
Sbjct: 480 LAVLLANKGDID 491



 Score = 40.8 bits (94), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 66/295 (22%), Positives = 125/295 (42%), Gaps = 36/295 (12%)

Query: 452 NNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASML----QFKDMQL 507
           NN+  +  EKGE + A + +++A+       + D  +K Y  +  A +L    +  + + 
Sbjct: 206 NNLAFLLSEKGEIDEAEKLYREAI------KIDDKNSKAY--NNLAFLLSEREEIDEAEK 257

Query: 508 FHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAA 567
            +R       +++         NLA LL    +   A  LY+  +     Y  AY  LA 
Sbjct: 258 LYR-----EAIKIDDKNSNTYNNLALLLANKGEIDEAEKLYKEAIKIDDKYSKAYNNLAV 312

Query: 568 IAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKD 627
           +   +  +  + +L  EA+K++ K  N  + L  L LKN   +   E     +   D K+
Sbjct: 313 LLSEKGEMDEAEKLFREAIKIDDKNSNTYNNLA-LLLKNKGEIDEAEKLYREAIKIDDKN 371

Query: 628 SYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAE 687
           S        +N  A L   K         +++A++LY   I     N  A N    +L+E
Sbjct: 372 S------NTYNNLALLLANK-------GEIDEAEKLYKEAIKIDDKNSKAYNNLAFLLSE 418

Query: 688 KGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLR 742
           KG+   ++ L+ +     +  +  +  D++ NLA +   +G+   A K+Y+  ++
Sbjct: 419 KGEIGEAEKLYRE-----AIKIDDKDSDIYYNLALLLKNKGDIDEAEKLYREAIK 468


>gi|73669941|ref|YP_305956.1| hypothetical protein Mbar_A2461 [Methanosarcina barkeri str.
           Fusaro]
 gi|72397103|gb|AAZ71376.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro]
          Length = 398

 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 75/278 (26%), Positives = 126/278 (45%), Gaps = 28/278 (10%)

Query: 144 VEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGI 203
           + +A +A +  LE + ++  A  G+A V     +YSDSL+  K+AL++ P  P  +    
Sbjct: 72  LNKALAAHEKALEKNPEDSAAWAGKAAVFLKHRKYSDSLKAIKKALEIEPENPHYL-YEK 130

Query: 204 GLCRYKLGQLGKARQAFQRALQLDPENVEA--LVALAVMDLQANEAAGIRKGMEKMQRAF 261
           G    +L + G A QAF R L++ P++ +A  L    +  L+ +E     K +   ++A 
Sbjct: 131 GFVLLQLNREGDALQAFDRLLEIKPDSDKAWNLKTSVLCRLKQHE-----KALGDSEKAL 185

Query: 262 EIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG-- 319
              P    A +   +     G++   E+  E   A     P       NLAR    KG  
Sbjct: 186 SSNPKLGGAWHSKGSVLADLGRY---EEAIEAYDAALKLNP-------NLARVLVGKGFA 235

Query: 320 ----DYE-KAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPD 374
               D   +A + Y A++K IN   +    + G G + LKLG F+ A+    K + I PD
Sbjct: 236 LYSLDRPVEAMIAYDAALK-IN--PDNAKNWIGKGLIHLKLGKFKRAIAACSKAISIKPD 292

Query: 375 NCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQA 412
           + +     G  +  L +  +A   L +A +IDP + +A
Sbjct: 293 SSDAWYCKGMAFSSLDKNGEALGALERALRIDPDNIEA 330



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 34/129 (26%), Positives = 65/129 (50%), Gaps = 1/129 (0%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
           A + Y+ A +++ +     VGKG  L +     +A  A+   L+ + DN    +G+  + 
Sbjct: 211 AIEAYDAALKLNPNLARVLVGKGFALYSLDRPVEAMIAYDAALKINPDNAKNWIGKGLIH 270

Query: 173 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 232
              G++  ++    +A+ + P    A     G+    L + G+A  A +RAL++DP+N+E
Sbjct: 271 LKLGKFKRAIAACSKAISIKPDSSDAWYCK-GMAFSSLDKNGEALGALERALRIDPDNIE 329

Query: 233 ALVALAVMD 241
           A  ALA ++
Sbjct: 330 ARKALASVN 338


>gi|17647755|ref|NP_523620.1| super sex combs, isoform B [Drosophila melanogaster]
 gi|24585827|ref|NP_724406.1| super sex combs, isoform A [Drosophila melanogaster]
 gi|24585829|ref|NP_724407.1| super sex combs, isoform C [Drosophila melanogaster]
 gi|6942068|gb|AAF32311.1|AF217788_1 O-glycosyltransferase [Drosophila melanogaster]
 gi|7302245|gb|AAF57338.1| super sex combs, isoform B [Drosophila melanogaster]
 gi|10728167|gb|AAG22338.1| super sex combs, isoform A [Drosophila melanogaster]
 gi|10728168|gb|AAG22339.1| super sex combs, isoform C [Drosophila melanogaster]
 gi|189182206|gb|ACD81879.1| SD06381p [Drosophila melanogaster]
          Length = 1059

 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 87/388 (22%), Positives = 164/388 (42%), Gaps = 28/388 (7%)

Query: 93  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 152
           Y+ LG +  ++ + +E    A   Y +A R+       ++     L+A  ++E A  A+ 
Sbjct: 121 YSNLGNVFKERGQLQE----ALDNYRRAVRLKPDFIDGYINLAAALVAARDMESAVQAYI 176

Query: 153 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPG--AIRLGIGLCRY 208
             L+ + D   V + LG        GR  ++   Y +A++   +CPG       +G    
Sbjct: 177 TALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIE---TCPGFAVAWSNLGCVFN 231

Query: 209 KLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCA 268
             G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A
Sbjct: 232 AQGEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAAYLRALNLSPNNA 288

Query: 269 MALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYY 328
           +    LA  ++  G   L++   +T        P    +Y NLA +   KG  ++A   Y
Sbjct: 289 VVHGNLACVYYEQG---LIDLAIDTYRRAIELQPNFPDAYCNLANALKEKGQVKEAEDCY 345

Query: 329 MASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQ 388
             +++  +   + +     L  ++ + G    A   + K LE++PD       L  +  Q
Sbjct: 346 NTALRLCSNHADSL---NNLANIKREQGYIEEATRLYLKALEVFPDFAAAHSNLASVLQQ 402

Query: 389 LGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGEEVP 447
            G++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +         
Sbjct: 403 QGKLKEALMHYKEAIRIQPTFADAYSNMGNTLKELQDVSGALQCYTRAIQINPAFA---- 458

Query: 448 IEVLNNIGVIHFEKGEFESAHQSFKDAL 475
            +  +N+  IH + G    A QS++ AL
Sbjct: 459 -DAHSNLASIHKDSGNIPEAIQSYRTAL 485



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 100/456 (21%), Positives = 184/456 (40%), Gaps = 29/456 (6%)

Query: 158 DRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKAR 217
           D  N   LL  + + F   R   S +F   A++ +P    A    +G    + GQL +A 
Sbjct: 80  DSTNTGVLLLLSSIHFQCRRLDKSAQFSTLAIKQNPVLAEAYS-NLGNVFKERGQLQEAL 138

Query: 218 QAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYP--YCAMALNYLA 275
             ++RA++L P+ ++  + LA   + A +   +   ++    A +  P  YC  +   L 
Sbjct: 139 DNYRRAVRLKPDFIDGYINLAAALVAARD---MESAVQAYITALQYNPDLYCVRS--DLG 193

Query: 276 NHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEI 335
           N     G+   +E+     L      P  + ++ NL   ++++G+   A  ++    K +
Sbjct: 194 NLLKALGR---LEEAKACYLKAIETCPGFAVAWSNLGCVFNAQGEIWLAIHHFE---KAV 247

Query: 336 NKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKA 395
                F+  Y  LG V  +   F  A+  + + L + P+N      L  +Y + G I+ A
Sbjct: 248 TLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALNLSPNNAVVHGNLACVYYEQGLIDLA 307

Query: 396 QELLRKAAKIDPRDAQAFIDLGELLI-SSDTGAALDAFKTARTLLKKAGEEVPIEVLNNI 454
            +  R+A ++ P    A+ +L   L        A D + TA  L     +      LNN+
Sbjct: 308 IDTYRRAIELQPNFPDAYCNLANALKEKGQVKEAEDCYNTALRLCSNHADS-----LNNL 362

Query: 455 GVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFEND 514
             I  E+G  E A + +  AL   ++     + +        AS+LQ +  +L     + 
Sbjct: 363 ANIKREQGYIEEATRLYLKAL--EVFPDFAAAHSNL------ASVLQ-QQGKLKEALMHY 413

Query: 515 GNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNN 574
              + +         N+   L+++ D   A   Y   +     + DA+  LA+I K   N
Sbjct: 414 KEAIRIQPTFADAYSNMGNTLKELQDVSGALQCYTRAIQINPAFADAHSNLASIHKDSGN 473

Query: 575 LQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWV 610
           +  +I+    ALK+   +P+A   L        DW 
Sbjct: 474 IPEAIQSYRTALKLKPDFPDAYCNLAHCLQIVCDWT 509



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 73/338 (21%), Positives = 134/338 (39%), Gaps = 48/338 (14%)

Query: 83  IAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKG 142
           I       V ++ LG +   Q E      LA  ++ KA  +D +    ++  G +L    
Sbjct: 213 IETCPGFAVAWSNLGCVFNAQGE----IWLAIHHFEKAVTLDPNFLDAYINLGNVLKEAR 268

Query: 143 EVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLG 202
             ++A +A+   L    +N       ACV + +G    +++ Y+RA+++ P+ P A    
Sbjct: 269 IFDRAVAAYLRALNLSPNNAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPNFPDAY-CN 327

Query: 203 IGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFE 262
           +     + GQ+ +A   +  AL+L   + ++L  LA +     E   I +      +A E
Sbjct: 328 LANALKEKGQVKEAEDCYNTALRLCSNHADSLNNLANIK---REQGYIEEATRLYLKALE 384

Query: 263 IYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYE 322
           ++P  A A                                   HS  NLA     +G  +
Sbjct: 385 VFPDFAAA-----------------------------------HS--NLASVLQQQGKLK 407

Query: 323 KAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKAL 382
           +A ++Y  +++   +P  F   Y  +G    +L D   AL  + + ++I P   +    L
Sbjct: 408 EALMHYKEAIRI--QP-TFADAYSNMGNTLKELQDVSGALQCYTRAIQINPAFADAHSNL 464

Query: 383 GHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 420
             I+   G I +A +  R A K+ P    A+ +L   L
Sbjct: 465 ASIHKDSGNIPEAIQSYRTALKLKPDFPDAYCNLAHCL 502


>gi|148360062|ref|YP_001251269.1| methyltransferase [Legionella pneumophila str. Corby]
 gi|296108117|ref|YP_003619818.1| hypothetical protein lpa_03621 [Legionella pneumophila 2300/99
           Alcoy]
 gi|148281835|gb|ABQ55923.1| methyltransferase [Legionella pneumophila str. Corby]
 gi|295650019|gb|ADG25866.1| Hypothetical protein lpa_03621 [Legionella pneumophila 2300/99
           Alcoy]
          Length = 577

 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 82/367 (22%), Positives = 149/367 (40%), Gaps = 29/367 (7%)

Query: 65  EGSSPEIDEYYADVRYE---RIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKAS 121
           EG  P+    Y  +  +       L+ LG+ Y  LG +E            A  Y+ +A 
Sbjct: 18  EGHLPQAISLYEQILAQSPKHTETLHFLGLTYAQLGDMEN-----------AILYFLQAR 66

Query: 122 RIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDS 181
           +I+ ++              G++++A   ++  +E   + V A    A        Y  +
Sbjct: 67  KINPNDVGILNNLANAYKKAGQLDEAIKYYQQAIEIKPEYVQAHNNLAATYALLNNYQKA 126

Query: 182 LEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMD 241
           L  Y  A+   P    A    +GL   K  QL  A+  F   + L+P++ EA   L ++ 
Sbjct: 127 LHHYVIAVNTEPDFSAA-HFNLGLLLLKNQQLSAAKTQFNNVIALNPQHREAQFYLGILH 185

Query: 242 LQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG 301
           L+ N  +   +   K+      +    + L  +A       Q+ L       ALA+ N  
Sbjct: 186 LEDNLLSEAEQAFHKVLEQDHEHVQSLINLGVIA---LKREQNQLAVDYFTKALALDNED 242

Query: 302 PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSA 361
               +   NLA ++     +E A ++Y   +K+     E++   Y  G  Q+ LG    A
Sbjct: 243 IDARN---NLAATFMHHDRFENALMHYDVLLKKEPDNLEYL---YNSGVAQMALGHLNEA 296

Query: 362 LTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLI 421
              F+++L +  D+  +L  L  IY+++   E A+E L +A  I+P D      +   ++
Sbjct: 297 TLLFDQILTLQSDHTPSLNNLAAIYLKMDMRETAREYLERALVINPDDV-----VSRHML 351

Query: 422 SSDTGAA 428
           ++ TGA 
Sbjct: 352 NAITGAT 358


>gi|452821408|gb|EME28439.1| hypothetical protein Gasu_41290 [Galdieria sulphuraria]
          Length = 677

 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 85/334 (25%), Positives = 143/334 (42%), Gaps = 13/334 (3%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK--IVLEADRDNVPALLGQAC 170
           A + YN A R   + P+     G +LL KG++EQA    +  + L  +     +LLG   
Sbjct: 80  AMEAYNNALRFSSNTPTPLCKLGSILLRKGQLEQALIYIQQALALSGNSGEAWSLLGYYY 139

Query: 171 VEFNRGRYSDSLEFYKRALQVHPSCPGA-IRLGIGLCRYKLGQLGKARQAFQRALQLDPE 229
           ++   G Y  + E ++ A+++      A +  GIGL     G    A +A+Q AL+L P 
Sbjct: 140 LK--TGAYEQAYEAFQSAIRLLGDQASAFLWYGIGLLYELNGSTDYALEAYQNALKLKPY 197

Query: 230 NVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQ-HFLVE 288
           + + +     +     E   +    E + +AF            L   FF  G    L  
Sbjct: 198 SEQTIDIYLHIAHIYEEREALDVASEYLNKAFLHVSTFNFNTTILGEIFFRMGAIQELKR 257

Query: 289 QLT---ETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 345
            +T   E  L      P  + S   L    H +G  E  G   +    E + P++    +
Sbjct: 258 NVTMAKEFYLKALKESPNHAKSLQQLGWIEHEEGRSED-GFQLLKRAVEAD-PNDGQ-GW 314

Query: 346 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKI 405
           Y LG++ +   ++RSA  N++  +     N     ++G +Y Q+GQ   A +   +A ++
Sbjct: 315 YLLGRLHMAKKEYRSAYDNYQHAVYCNSRNPRFWCSIGVLYYQMGQHRDAMDAYTRAIRL 374

Query: 406 DPRDAQAFIDLGELLIS-SDTGAALDAFKTARTL 438
           +P  ++ + DLG L  S S    ALDA+K A  L
Sbjct: 375 NPNLSEVWYDLGTLYESFSQYKDALDAYKKALEL 408



 Score = 40.0 bits (92), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 63/135 (46%), Gaps = 5/135 (3%)

Query: 344 PYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAA 403
           P   LG + L+ G    AL   ++ L +  ++ E    LG+ Y++ G  E+A E  + A 
Sbjct: 97  PLCKLGSILLRKGQLEQALIYIQQALALSGNSGEAWSLLGYYYLKTGAYEQAYEAFQSAI 156

Query: 404 KIDPRDAQAFIDLGELL---ISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFE 460
           ++    A AF+  G  L   ++  T  AL+A++ A  L  K   E  I++  +I  I+ E
Sbjct: 157 RLLGDQASAFLWYGIGLLYELNGSTDYALEAYQNALKL--KPYSEQTIDIYLHIAHIYEE 214

Query: 461 KGEFESAHQSFKDAL 475
           +   + A +    A 
Sbjct: 215 REALDVASEYLNKAF 229


>gi|443324671|ref|ZP_21053408.1| capsular polysaccharide biosynthesis protein [Xenococcus sp. PCC
           7305]
 gi|442795712|gb|ELS05062.1| capsular polysaccharide biosynthesis protein [Xenococcus sp. PCC
           7305]
          Length = 903

 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/138 (31%), Positives = 73/138 (52%), Gaps = 4/138 (2%)

Query: 302 PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSA 361
           PT +  YYNLA  +H  GD+E+    Y  +VK  +KP+ +   Y+ LG +    G +  A
Sbjct: 102 PTWAEIYYNLAVIWHEVGDWEQTITAYQQAVK--HKPN-YTAAYFNLGLLYDNRGQWNEA 158

Query: 362 LTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL- 420
           + N+++ +E+ P N      LG    +  + E A E+L++  KIDP  A    +LG++L 
Sbjct: 159 VANYQRAIELQPYNIRAYSNLGSTLARHQKYESAIEVLQQGLKIDPTWATLHNNLGQVLW 218

Query: 421 ISSDTGAALDAFKTARTL 438
           +      AL +F+ A +L
Sbjct: 219 LEGRLDQALVSFELALSL 236



 Score = 39.7 bits (91), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 56/280 (20%), Positives = 106/280 (37%), Gaps = 60/280 (21%)

Query: 141 KGEVEQASSAFKIVLEADRDNVPALLGQACVEFN-----RGRYSDSLEFYKRALQVHPSC 195
           +G+ ++A +A+ I L    +       Q C E       + +++ ++  Y++A+ + P+ 
Sbjct: 50  QGDFDKAITAYHISLGNQPEQ-----AQICAELGLLYSKQKKFTQAISNYQKAIALKPTW 104

Query: 196 PGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVM---DLQANEAAGIRK 252
              I   + +  +++G   +   A+Q+A++  P    A   L ++     Q NEA     
Sbjct: 105 -AEIYYNLAVIWHEVGDWEQTITAYQQAVKHKPNYTAAYFNLGLLYDNRGQWNEAVA--- 160

Query: 253 GMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLA 312
                QRA E+ PY   A + L       G      Q  E+A+ V   G     ++  L 
Sbjct: 161 ---NYQRAIELQPYNIRAYSNL-------GSTLARHQKYESAIEVLQQGLKIDPTWATLH 210

Query: 313 RSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIY 372
            +                                 LGQV    G    AL +FE  L + 
Sbjct: 211 NN---------------------------------LGQVLWLEGRLDQALVSFELALSLE 237

Query: 373 PDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQA 412
           PD       L  ++ Q    ++A   L++  +++P ++ A
Sbjct: 238 PDMVLANHNLSRLWQQESNYDRAFSYLQEVTELEPNNSSA 277


>gi|300864445|ref|ZP_07109316.1| tetratricopeptide TPR_2 [Oscillatoria sp. PCC 6506]
 gi|300337589|emb|CBN54464.1| tetratricopeptide TPR_2 [Oscillatoria sp. PCC 6506]
          Length = 1129

 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 68/308 (22%), Positives = 139/308 (45%), Gaps = 14/308 (4%)

Query: 134 KGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHP 193
           + +  L +G   +A ++ ++ L+   D + A +        +G+   ++  Y++AL+  P
Sbjct: 323 RAEAYLLQGNFREAIASCQLALKIRPDFIQAYVTLGNALQGQGKMDAAIRAYEQALEFEP 382

Query: 194 SCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA-VMDLQANEAAGIRK 252
           +    +R  IG   +K+G L KA   +Q+A+ L P+       L  V   Q   A  I  
Sbjct: 383 NY-AEVRANIGSMYFKMGHLEKAIVYYQQAIALKPDLAGVYWNLGKVFQKQGKSAEAI-- 439

Query: 253 GMEKMQRAFEIYPYCAMALNY--LANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYN 310
                Q+  +I P+   A  +  LAN     G+     Q  + A+AV    P  + +Y N
Sbjct: 440 --AYFQKTSDINPHVVGADFHFNLANTLLTEGKRDEAIQSYQRAIAVK---PDWAEAYAN 494

Query: 311 LARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLE 370
           +  +   +G+ E+A  YY  ++  I    E +  ++ +    L  G +  A++N+++ ++
Sbjct: 495 IGSARMQQGNLEEAIQYYRKAIA-IKPQLEAL--HFNIANALLHQGKYEEAISNYQEAIK 551

Query: 371 IYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALD 430
             PD  + +  +G+ +   G++E+A    ++A    P  A+ +  +G +      G ++ 
Sbjct: 552 HKPDWPDAIANMGNAFSMQGKLEEAIATYQQALVYKPDWAEVYCRMGHIQKQDRPGESIG 611

Query: 431 AFKTARTL 438
            F+ A  L
Sbjct: 612 YFEKAIEL 619



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 116/570 (20%), Positives = 215/570 (37%), Gaps = 103/570 (18%)

Query: 107 EEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALL 166
           +E   +A   Y++A  ID +        G +    G +++A+++++  L  + +    LL
Sbjct: 93  QEQLEMAIHAYSQALEIDPNFAEAHANLGSMYYKLGRLDEAANSYQKALANNPNLASVLL 152

Query: 167 GQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCR--YKLGQ-------LGKAR 217
               +   +     ++  Y+++L + P          GL R  YKL +       +  A 
Sbjct: 153 MLGNILQQQEDLGAAIACYQKSLVLQP----------GLLRNYYKLAEALTKSNNVDAAI 202

Query: 218 QAFQRALQLDPENVEALVALAVMD-LQANEAAGIRKGMEKMQRAF--------------- 261
             +Q+ LQL P + EA   L+ +  L++ E        E  +  F               
Sbjct: 203 SCYQKVLQLQPGDAEATDKLSSLQQLKSQEEPKNSPNDEGTKGQFLELEKEGEWQQQEPI 262

Query: 262 ---EIYPYCAMALNYLANHFFFTGQHFLVEQLTETA------LAVTNHGPTKS------- 305
              E Y     +LN        T Q   +++  ETA      ++  N  P +        
Sbjct: 263 KQDEEYGLQPSSLNLPQ-----TTQDLSLDRPFETADETAEQVSSFNFNPPEQVAKFQEV 317

Query: 306 HSYYNLARSYHSKGDYEKAGLYYMASVK-EINKPHEFIFPYYGLGQVQLKLGDFRSALTN 364
             Y   A +Y  +G++ +A    +AS +  +    +FI  Y  LG      G   +A+  
Sbjct: 318 EEYKKRAEAYLLQGNFREA----IASCQLALKIRPDFIQAYVTLGNALQGQGKMDAAIRA 373

Query: 365 FEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL---- 420
           +E+ LE  P+  E    +G +Y ++G +EKA    ++A  + P  A  + +LG++     
Sbjct: 374 YEQALEFEPNYAEVRANIGSMYFKMGHLEKAIVYYQQAIALKPDLAGVYWNLGKVFQKQG 433

Query: 421 --------------ISSDTGAALDAFKTARTLLKKAGEEVPI--------------EVLN 452
                         I+     A   F  A TLL +   +  I              E   
Sbjct: 434 KSAEAIAYFQKTSDINPHVVGADFHFNLANTLLTEGKRDEAIQSYQRAIAVKPDWAEAYA 493

Query: 453 NIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFE 512
           NIG    ++G  E A Q ++ A+     L  L          A+A + Q K  +    ++
Sbjct: 494 NIGSARMQQGNLEEAIQYYRKAIAIKPQLEALHFNI------ANALLHQGKYEEAISNYQ 547

Query: 513 NDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKAR 572
               H     + +  + N   +  ++ + +A    Y+  L    D+ + Y R+  I K +
Sbjct: 548 EAIKHKPDWPDAIANMGNAFSMQGKLEEAIAT---YQQALVYKPDWAEVYCRMGHIQK-Q 603

Query: 573 NNLQLSIELVNEALKVNGKYPNALSMLGDL 602
           +    SI    +A+++N  +  A   L DL
Sbjct: 604 DRPGESIGYFEKAIELNPYFSEAHQQLCDL 633



 Score = 43.5 bits (101), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 35/137 (25%), Positives = 65/137 (47%), Gaps = 2/137 (1%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
           A   Y KA   ++ +        ++ + KG+++ A ++ K  L+   D  PA L      
Sbjct: 31  AADNYQKAISFNVEDAEIHRKLAEVYILKGQLDSAIASCKFALKVKPDFAPAYLTMGNAF 90

Query: 173 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 232
            ++ +   ++  Y +AL++ P+   A    +G   YKLG+L +A  ++Q+AL  +P    
Sbjct: 91  HSQEQLEMAIHAYSQALEIDPNFAEA-HANLGSMYYKLGRLDEAANSYQKALANNPNLAS 149

Query: 233 ALVALAVMDLQANEAAG 249
            L+ L  + LQ  E  G
Sbjct: 150 VLLMLGNI-LQQQEDLG 165



 Score = 40.0 bits (92), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 49/249 (19%), Positives = 90/249 (36%), Gaps = 49/249 (19%)

Query: 356 GDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFID 415
           G   +A  N++K +    ++ E  + L  +Y+  GQ++ A    + A K+ P  A A++ 
Sbjct: 26  GKLDAAADNYQKAISFNVEDAEIHRKLAEVYILKGQLDSAIASCKFALKVKPDFAPAYLT 85

Query: 416 LGELLISSDT-GAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDA 474
           +G    S +    A+ A+  A  +          E   N+G ++++ G  + A  S++ A
Sbjct: 86  MGNAFHSQEQLEMAIHAYSQALEIDPNFA-----EAHANLGSMYYKLGRLDEAANSYQKA 140

Query: 475 LGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARL 534
           L +                                             N  +VL  L  +
Sbjct: 141 LANNP-------------------------------------------NLASVLLMLGNI 157

Query: 535 LEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPN 594
           L+Q  D  AA   Y+  L      +  Y +LA      NN+  +I    + L++      
Sbjct: 158 LQQQEDLGAAIACYQKSLVLQPGLLRNYYKLAEALTKSNNVDAAISCYQKVLQLQPGDAE 217

Query: 595 ALSMLGDLE 603
           A   L  L+
Sbjct: 218 ATDKLSSLQ 226



 Score = 39.7 bits (91), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 59/130 (45%), Gaps = 6/130 (4%)

Query: 311 LARSYHSKGDYEKAGLYYMASVK-EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVL 369
           LA  Y  KG  + A    +AS K  +    +F   Y  +G           A+  + + L
Sbjct: 52  LAEVYILKGQLDSA----IASCKFALKVKPDFAPAYLTMGNAFHSQEQLEMAIHAYSQAL 107

Query: 370 EIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISS-DTGAA 428
           EI P+  E    LG +Y +LG++++A    +KA   +P  A   + LG +L    D GAA
Sbjct: 108 EIDPNFAEAHANLGSMYYKLGRLDEAANSYQKALANNPNLASVLLMLGNILQQQEDLGAA 167

Query: 429 LDAFKTARTL 438
           +  ++ +  L
Sbjct: 168 IACYQKSLVL 177


>gi|62821820|ref|NP_001017359.1| O-linked N-acetylglucosamine transferase isoform 1 [Danio rerio]
 gi|56967372|gb|AAW31870.1| O-GlcNAc transferase variant 1 [Danio rerio]
          Length = 1062

 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 87/391 (22%), Positives = 166/391 (42%), Gaps = 34/391 (8%)

Query: 93  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 152
           Y+ LG +  ++ + +E    A ++Y  A R+       ++     L+A G++E A  A+ 
Sbjct: 92  YSNLGNVYKERGQLQE----AIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 147

Query: 153 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 210
             L+ + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 148 SALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIETQPNFAVAWS-NLGCVFNAQ 204

Query: 211 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 270
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 205 GEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAGYLRALSLSPNHAVV 261

Query: 271 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 330
              LA  ++  G   L       A+ +  H P    +Y NLA +   KG+  +A   Y  
Sbjct: 262 HGNLACVYYEQGLIDLAIDTYRRAIELQPHFPD---AYCNLANALKEKGNVSEAEECYNT 318

Query: 331 SVKEINKPHEFIFPYYG-----LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 385
           +++        + P +      L  ++ + G+   A+  + K LE++P+       L  +
Sbjct: 319 ALR--------LCPTHADSLNNLANIKREQGNIEEAVQLYRKALEVFPEFAAAHSNLASV 370

Query: 386 YVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGE 444
             Q G++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +      
Sbjct: 371 LQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA- 429

Query: 445 EVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
               +  +N+  IH + G    A  S++ AL
Sbjct: 430 ----DAHSNLASIHKDSGNIPEAIASYRTAL 456



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 103/496 (20%), Positives = 194/496 (39%), Gaps = 64/496 (12%)

Query: 142 GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 201
           G+ E A      +   + DN   LL  + + F   R   S  F   A++ +P    A   
Sbjct: 35  GDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPMLAEAYS- 93

Query: 202 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 261
            +G    + GQL +A + ++ AL+L P+ ++  + LA   + A +  G    ++    A 
Sbjct: 94  NLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEG---AVQAYVSAL 150

Query: 262 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 319
           +  P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G
Sbjct: 151 QYNPDLYCVRS--DLGNLLKALGR---LEEAKACYLKAIETQPNFAVAWSNLGCVFNAQG 205

Query: 320 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 379
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++    
Sbjct: 206 EIWLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVAGYLRALSLSPNHAVVH 262

Query: 380 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLI-SSDTGAALDAFKTARTL 438
             L  +Y + G I+ A +  R+A ++ P    A+ +L   L    +   A + + TA  L
Sbjct: 263 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGNVSEAEECYNTALRL 322

Query: 439 LKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASAS 498
                +      LNN+  I  E+G  E A Q ++ AL                       
Sbjct: 323 CPTHADS-----LNNLANIKREQGNIEEAVQLYRKAL----------------------- 354

Query: 499 MLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDY 558
                  ++F  F                  NLA +L+Q      A + Y+  +     +
Sbjct: 355 -------EVFPEF-------------AAAHSNLASVLQQQGKLQEALMHYKEAIRISPTF 394

Query: 559 VDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRA 618
            DAY  +    K   ++Q +++    A+++N  + +A S L  +   + +  +A  ++R 
Sbjct: 395 ADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRT 454

Query: 619 ASD-ATDGKDSYATLS 633
           A     D  D+Y  L+
Sbjct: 455 ALKLKPDFPDAYCNLA 470


>gi|225619724|ref|YP_002720981.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
 gi|225214543|gb|ACN83277.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
          Length = 424

 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 84/357 (23%), Positives = 148/357 (41%), Gaps = 29/357 (8%)

Query: 70  EIDEYYADVRYERIAILNALGVYYTYLGK-------IETKQREKEE---------HFILA 113
           EIDE YA++ Y R    + LG+Y   +         + T  +  ++         ++  A
Sbjct: 62  EIDENYAELYYNRANCESNLGLYEAAINDYDKVIELVPTHSKAYDDRGYAKGNLGYYEEA 121

Query: 114 TQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEF 173
            +  +KA  +D +    ++ +  + L   +  +A   +K VLE D   V A  G    + 
Sbjct: 122 IKDIDKAIVLDSNNIDAYIDRAFIKLMSKKYIEAIEDYKKVLELDDTEVYAYNGIGDAKR 181

Query: 174 NRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEA 233
           + G Y +++ +Y + +++  S         G C+  LG   +A     +AL++  E  +A
Sbjct: 182 SIGLYEEAISYYNKVIEISNSNSSYAYNNRGACKIGLGLYNEAIIDINKALEIYDEYTDA 241

Query: 234 LV--ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLT 291
                 A  +L+       ++ +E   +A E+ P    A N   N     G   L E   
Sbjct: 242 YNNRGTAKYNLEL-----YKEAIEDFDKAIELSPQYFYAYNNRGNSKSALG---LYEDAI 293

Query: 292 ETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQV 351
           E      N  P    +YYN A + ++ G + +A   Y   V E++  H  I  YY     
Sbjct: 294 EDFNIAINIEPKYIDAYYNRAVAKNNMGLHNEAIKDYDI-VIELDSNH--INAYYNRALS 350

Query: 352 QLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPR 408
              L D+  A+ N++KV+E+ P + E     G     +G  E+A +   KA +ID  
Sbjct: 351 YYNLSDYEEAIKNYDKVIELNPKSAEAYNNRGFAKYSIGLYEEALKDYDKAIEIDSN 407



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 72/313 (23%), Positives = 131/313 (41%), Gaps = 19/313 (6%)

Query: 106 KEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPAL 165
           +E  F  A   + KA   D +    +   G    A G  E+A + +   +E D +     
Sbjct: 12  RETQFEKAAALFIKALEEDRNNSEIYNYLGITKQALGFYEEAINYYSKGIEIDENYAELY 71

Query: 166 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 225
             +A  E N G Y  ++  Y + +++ P+   A     G  +  LG   +A +   +A+ 
Sbjct: 72  YNRANCESNLGLYEAAINDYDKVIELVPTHSKAYD-DRGYAKGNLGYYEEAIKDIDKAIV 130

Query: 226 LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 285
           LD  N++A +  A + L + +     + +E  ++  E+      A N + +     G   
Sbjct: 131 LDSNNIDAYIDRAFIKLMSKKYI---EAIEDYKKVLELDDTEVYAYNGIGDAKRSIG--- 184

Query: 286 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGL-YYMASVKEINKP----HE 340
               L E A++  N     S+S  N + +Y+++G   K GL  Y  ++ +INK      E
Sbjct: 185 ----LYEEAISYYNKVIEISNS--NSSYAYNNRGAC-KIGLGLYNEAIIDINKALEIYDE 237

Query: 341 FIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLR 400
           +   Y   G  +  L  ++ A+ +F+K +E+ P         G+    LG  E A E   
Sbjct: 238 YTDAYNNRGTAKYNLELYKEAIEDFDKAIELSPQYFYAYNNRGNSKSALGLYEDAIEDFN 297

Query: 401 KAAKIDPRDAQAF 413
            A  I+P+   A+
Sbjct: 298 IAINIEPKYIDAY 310



 Score = 42.0 bits (97), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 39/150 (26%), Positives = 72/150 (48%), Gaps = 9/150 (6%)

Query: 319 GDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCET 378
           G YE+A  YY   + EI++ +  +  YY     +  LG + +A+ +++KV+E+ P + + 
Sbjct: 48  GFYEEAINYYSKGI-EIDENYAEL--YYNRANCESNLGLYEAAINDYDKVIELVPTHSKA 104

Query: 379 LKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGEL-LISSDTGAALDAFKTART 437
               G+    LG  E+A + + KA  +D  +  A+ID   + L+S     A++ +K    
Sbjct: 105 YDDRGYAKGNLGYYEEAIKDIDKAIVLDSNNIDAYIDRAFIKLMSKKYIEAIEDYKKVLE 164

Query: 438 LLKKAGEEVPIEVLNNIGVIHFEKGEFESA 467
           L     ++  +   N IG      G +E A
Sbjct: 165 L-----DDTEVYAYNGIGDAKRSIGLYEEA 189


>gi|435850371|ref|YP_007311957.1| tetratricopeptide repeat protein [Methanomethylovorans hollandica
           DSM 15978]
 gi|433661001|gb|AGB48427.1| tetratricopeptide repeat protein [Methanomethylovorans hollandica
           DSM 15978]
          Length = 504

 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 68/303 (22%), Positives = 135/303 (44%), Gaps = 14/303 (4%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
           A Q ++KA+ I+  +   W  KG   +  G   +A  A    +  D     AL  +  + 
Sbjct: 183 AIQAFDKATGINKKDAKAWNYKGVSYIELGMNYEAMEALNNAIGLDPQYSTALSNKGYLL 242

Query: 173 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 232
               RY +++    +A+++ P    A     G    ++G+  +A QAF +A+QLDP + E
Sbjct: 243 NQMRRYEEAIRVCDQAIEIEPQDAKAWNYK-GYALNEMGKNEEAIQAFDKAIQLDPLDAE 301

Query: 233 ALV--ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQL 290
                  A+ +++  E     K +E + +A EI P  A A N      +   ++   E  
Sbjct: 302 IWYYKGTALYEMKEYE-----KALENLNKATEINPQYAEAWNDKGRAHYNINEY---ENA 353

Query: 291 TETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQ 350
            +    V    P    ++ +   S     +Y++A   Y  ++ E+N  + + + + G   
Sbjct: 354 IQAFDKVIELEPQNDAAWDSKGNSLRRMAEYDEAIQAYDKAI-ELNPQNSWTWMHKGY-- 410

Query: 351 VQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDA 410
               +G    A   F+KV+E+ P+N +   + G+   ++G+I+++ +   KA +++P  A
Sbjct: 411 TLYGMGKLEEAEQVFDKVIELNPENSDAWYSKGNTLRRMGKIDESIQAYDKAIELNPDYA 470

Query: 411 QAF 413
            A+
Sbjct: 471 VAW 473



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 68/308 (22%), Positives = 135/308 (43%), Gaps = 10/308 (3%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
           A Q Y+KA  +D  +   W  KG  L    + E+A  A+    E +     A   +  V 
Sbjct: 115 AIQAYDKAIELDPLDGFAWYNKGIALFHIKKYEEAIQAYDEATELEPRFAMAWYNKGYVL 174

Query: 173 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 232
           +   RY ++++ + +A  ++     A     G+   +LG   +A +A   A+ LDP+   
Sbjct: 175 YYTKRYEEAIQAFDKATGINKKDAKAWNYK-GVSYIELGMNYEAMEALNNAIGLDPQYST 233

Query: 233 ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTE 292
           AL     +    N+     + +    +A EI P  A A NY        G++    Q  +
Sbjct: 234 ALSNKGYL---LNQMRRYEEAIRVCDQAIEIEPQDAKAWNYKGYALNEMGKNEEAIQAFD 290

Query: 293 TALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQ 352
            A+ +    P  +  +Y    + +   +YEKA L  +    EIN   ++   +   G+  
Sbjct: 291 KAIQLD---PLDAEIWYYKGTALYEMKEYEKA-LENLNKATEINP--QYAEAWNDKGRAH 344

Query: 353 LKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQA 412
             + ++ +A+  F+KV+E+ P N     + G+   ++ + ++A +   KA +++P+++  
Sbjct: 345 YNINEYENAIQAFDKVIELEPQNDAAWDSKGNSLRRMAEYDEAIQAYDKAIELNPQNSWT 404

Query: 413 FIDLGELL 420
           ++  G  L
Sbjct: 405 WMHKGYTL 412



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 68/312 (21%), Positives = 131/312 (41%), Gaps = 10/312 (3%)

Query: 106 KEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPAL 165
           +EE +  + + ++KA  ++      W GKG  L   G+ E+A  A+   ++   +NV   
Sbjct: 40  EEEKYSESIEAFDKAIELNPQNADAWAGKGMALSETGKNEEAIQAYDKAIQLKPNNVKFW 99

Query: 166 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 225
             +       GRY ++++ Y +A+++ P   G      G+  + + +  +A QA+  A +
Sbjct: 100 SEKGIALRKMGRYEEAIQAYDKAIELDP-LDGFAWYNKGIALFHIKKYEEAIQAYDEATE 158

Query: 226 LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 285
           L+P    A      +           + ++   +A  I    A A NY    +   G ++
Sbjct: 159 LEPRFAMAWYNKGYVLYYTKR---YEEAIQAFDKATGINKKDAKAWNYKGVSYIELGMNY 215

Query: 286 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 345
              +    A+ +    P  S +  N     +    YE+A +       EI       + Y
Sbjct: 216 EAMEALNNAIGLD---PQYSTALSNKGYLLNQMRRYEEA-IRVCDQAIEIEPQDAKAWNY 271

Query: 346 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKI 405
            G    ++  G    A+  F+K +++ P + E     G    ++ + EKA E L KA +I
Sbjct: 272 KGYALNEM--GKNEEAIQAFDKAIQLDPLDAEIWYYKGTALYEMKEYEKALENLNKATEI 329

Query: 406 DPRDAQAFIDLG 417
           +P+ A+A+ D G
Sbjct: 330 NPQYAEAWNDKG 341



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 76/337 (22%), Positives = 139/337 (41%), Gaps = 56/337 (16%)

Query: 173 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENV- 231
           F   +YS+S+E + +A++++P    A   G G+   + G+  +A QA+ +A+QL P NV 
Sbjct: 39  FEEEKYSESIEAFDKAIELNPQNADAW-AGKGMALSETGKNEEAIQAYDKAIQLKPNNVK 97

Query: 232 ---EALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVE 288
              E  +AL  M           + ++   +A E+ P    A        F   ++   E
Sbjct: 98  FWSEKGIALRKM-------GRYEEAIQAYDKAIELDPLDGFAWYNKGIALFHIKKY---E 147

Query: 289 QLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGL 348
           +  +     T   P  + ++YN     +    YE+A +        INK     + Y G+
Sbjct: 148 EAIQAYDEATELEPRFAMAWYNKGYVLYYTKRYEEA-IQAFDKATGINKKDAKAWNYKGV 206

Query: 349 GQVQLKLG---------------DFRSALTN-----------------FEKVLEIYPDNC 376
             ++L +                 + +AL+N                  ++ +EI P + 
Sbjct: 207 SYIELGMNYEAMEALNNAIGLDPQYSTALSNKGYLLNQMRRYEEAIRVCDQAIEIEPQDA 266

Query: 377 ETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTAR 436
           +     G+   ++G+ E+A +   KA ++DP DA+ +   G  L        +  ++ A 
Sbjct: 267 KAWNYKGYALNEMGKNEEAIQAFDKAIQLDPLDAEIWYYKGTALYE------MKEYEKAL 320

Query: 437 TLLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSF 471
             L KA E  P   E  N+ G  H+   E+E+A Q+F
Sbjct: 321 ENLNKATEINPQYAEAWNDKGRAHYNINEYENAIQAF 357


>gi|190340092|gb|AAI63923.1| O-linked N-acetylglucosamine (GlcNAc) transferase
           (UDP-N-acetylglucosamine:polypeptide-N-
           acetylglucosaminyl transferase) [Danio rerio]
          Length = 1046

 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 87/391 (22%), Positives = 166/391 (42%), Gaps = 34/391 (8%)

Query: 93  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 152
           Y+ LG +  ++ + +E    A ++Y  A R+       ++     L+A G++E A  A+ 
Sbjct: 92  YSNLGNVYKERGQLQE----AIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 147

Query: 153 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 210
             L+ + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 148 SALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIETQPNFAVAWS-NLGCVFNAQ 204

Query: 211 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 270
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 205 GEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAGYLRALSLSPNHAVV 261

Query: 271 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 330
              LA  ++  G   L       A+ +  H P    +Y NLA +   KG+  +A   Y  
Sbjct: 262 HGNLACVYYEQGLIDLAIDTYRRAIELQPHFPD---AYCNLANALKEKGNVSEAEECYNT 318

Query: 331 SVKEINKPHEFIFPYYG-----LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 385
           +++        + P +      L  ++ + G+   A+  + K LE++P+       L  +
Sbjct: 319 ALR--------LCPTHADSLNNLANIKREQGNIEEAVQLYRKALEVFPEFAAAHSNLASV 370

Query: 386 YVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGE 444
             Q G++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +      
Sbjct: 371 LQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA- 429

Query: 445 EVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
               +  +N+  IH + G    A  S++ AL
Sbjct: 430 ----DAHSNLASIHKDSGNIPEAIASYRTAL 456



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 103/496 (20%), Positives = 194/496 (39%), Gaps = 64/496 (12%)

Query: 142 GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 201
           G+ E A      +   + DN   LL  + + F   R   S  F   A++ +P    A   
Sbjct: 35  GDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPMLAEAYS- 93

Query: 202 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 261
            +G    + GQL +A + ++ AL+L P+ ++  + LA   + A +  G    ++    A 
Sbjct: 94  NLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEG---AVQAYVSAL 150

Query: 262 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 319
           +  P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G
Sbjct: 151 QYNPDLYCVRS--DLGNLLKALGR---LEEAKACYLKAIETQPNFAVAWSNLGCVFNAQG 205

Query: 320 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 379
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++    
Sbjct: 206 EIWLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVAGYLRALSLSPNHAVVH 262

Query: 380 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLI-SSDTGAALDAFKTARTL 438
             L  +Y + G I+ A +  R+A ++ P    A+ +L   L    +   A + + TA  L
Sbjct: 263 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGNVSEAEECYNTALRL 322

Query: 439 LKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASAS 498
                +      LNN+  I  E+G  E A Q ++ AL                       
Sbjct: 323 CPTHADS-----LNNLANIKREQGNIEEAVQLYRKAL----------------------- 354

Query: 499 MLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDY 558
                  ++F  F                  NLA +L+Q      A + Y+  +     +
Sbjct: 355 -------EVFPEF-------------AAAHSNLASVLQQQGKLQEALMHYKEAIRISPTF 394

Query: 559 VDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRA 618
            DAY  +    K   ++Q +++    A+++N  + +A S L  +   + +  +A  ++R 
Sbjct: 395 ADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRT 454

Query: 619 ASD-ATDGKDSYATLS 633
           A     D  D+Y  L+
Sbjct: 455 ALKLKPDFPDAYCNLA 470


>gi|66347873|ref|NP_001018115.1| O-linked N-acetylglucosamine transferase isoform 2 [Danio rerio]
 gi|56967374|gb|AAW31871.1| O-GlcNAc transferase variant 2 [Danio rerio]
          Length = 1052

 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 87/391 (22%), Positives = 166/391 (42%), Gaps = 34/391 (8%)

Query: 93  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 152
           Y+ LG +  ++ + +E    A ++Y  A R+       ++     L+A G++E A  A+ 
Sbjct: 82  YSNLGNVYKERGQLQE----AIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 137

Query: 153 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 210
             L+ + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 138 SALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIETQPNFAVAWS-NLGCVFNAQ 194

Query: 211 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 270
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 195 GEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAGYLRALSLSPNHAVV 251

Query: 271 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 330
              LA  ++  G   L       A+ +  H P    +Y NLA +   KG+  +A   Y  
Sbjct: 252 HGNLACVYYEQGLIDLAIDTYRRAIELQPHFPD---AYCNLANALKEKGNVSEAEECYNT 308

Query: 331 SVKEINKPHEFIFPYYG-----LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 385
           +++        + P +      L  ++ + G+   A+  + K LE++P+       L  +
Sbjct: 309 ALR--------LCPTHADSLNNLANIKREQGNIEEAVQLYRKALEVFPEFAAAHSNLASV 360

Query: 386 YVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGE 444
             Q G++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +      
Sbjct: 361 LQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA- 419

Query: 445 EVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
               +  +N+  IH + G    A  S++ AL
Sbjct: 420 ----DAHSNLASIHKDSGNIPEAIASYRTAL 446



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 103/497 (20%), Positives = 194/497 (39%), Gaps = 64/497 (12%)

Query: 141 KGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIR 200
            G+ E A      +   + DN   LL  + + F   R   S  F   A++ +P    A  
Sbjct: 24  SGDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPMLAEAYS 83

Query: 201 LGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRA 260
             +G    + GQL +A + ++ AL+L P+ ++  + LA   + A +  G    ++    A
Sbjct: 84  -NLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEG---AVQAYVSA 139

Query: 261 FEIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSK 318
            +  P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++
Sbjct: 140 LQYNPDLYCVRS--DLGNLLKALGR---LEEAKACYLKAIETQPNFAVAWSNLGCVFNAQ 194

Query: 319 GDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCET 378
           G+   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++   
Sbjct: 195 GEIWLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVAGYLRALSLSPNHAVV 251

Query: 379 LKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLI-SSDTGAALDAFKTART 437
              L  +Y + G I+ A +  R+A ++ P    A+ +L   L    +   A + + TA  
Sbjct: 252 HGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGNVSEAEECYNTALR 311

Query: 438 LLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASA 497
           L     +      LNN+  I  E+G  E A Q ++ AL                      
Sbjct: 312 LCPTHADS-----LNNLANIKREQGNIEEAVQLYRKAL---------------------- 344

Query: 498 SMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQD 557
                   ++F  F                  NLA +L+Q      A + Y+  +     
Sbjct: 345 --------EVFPEF-------------AAAHSNLASVLQQQGKLQEALMHYKEAIRISPT 383

Query: 558 YVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFR 617
           + DAY  +    K   ++Q +++    A+++N  + +A S L  +   + +  +A  ++R
Sbjct: 384 FADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYR 443

Query: 618 AASD-ATDGKDSYATLS 633
            A     D  D+Y  L+
Sbjct: 444 TALKLKPDFPDAYCNLA 460


>gi|333994602|ref|YP_004527215.1| hypothetical protein TREAZ_0636 [Treponema azotonutricium ZAS-9]
 gi|333737419|gb|AEF83368.1| tetratricopeptide repeat protein [Treponema azotonutricium ZAS-9]
          Length = 384

 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 69/284 (24%), Positives = 112/284 (39%), Gaps = 58/284 (20%)

Query: 134 KGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHP 193
           KG   L +  +E+A   F  +L+ D +N  AL+G       RG + D++ +Y+  L  HP
Sbjct: 38  KGYKYLRENRIEEAVDCFSQILKVDENNNYALVGMGDATRKRGSFKDAVIYYQHCLSYHP 97

Query: 194 SCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA-----VMDLQANEAA 248
               A+  G+  C   + Q  KA + +++ L  D +++  L  +A     V D + ++A 
Sbjct: 98  GNNYAL-FGLADCFKAINQFHKAIEIWEQYLLHDDKSITVLTRVADAYRKVRDFKHSKAV 156

Query: 249 GIRKGMEKMQRAFEI---YPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKS 305
            +        R  EI    PY  + L YL  H+ F                         
Sbjct: 157 YL--------RVLEIEADNPYAIIGLGYL--HYDFK------------------------ 182

Query: 306 HSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNF 365
                         +Y  A L+Y   + E+NK +  I     +G    KL  F S +  F
Sbjct: 183 --------------EYLDA-LFYWEKMIEVNKDNVDIRVLTSIGNCHRKLKTFESGIAYF 227

Query: 366 EKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRD 409
           EK L+  P N   L  L   Y  L Q +++     +  + DPR+
Sbjct: 228 EKALQRDPGNFYALFGLADCYRGLNQQDRSLGYWNRILEQDPRN 271


>gi|116623643|ref|YP_825799.1| hypothetical protein Acid_4555 [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116226805|gb|ABJ85514.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Solibacter
           usitatus Ellin6076]
          Length = 548

 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 97/422 (22%), Positives = 161/422 (38%), Gaps = 96/422 (22%)

Query: 93  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 152
           Y+ LG I+ + R+ E     A + Y++ S ID    +    +G  L    E + A+ AF+
Sbjct: 66  YSALGHIQYEMRDYE----AAGRTYSQLSEIDSQHRTAHFNRGVCLGNLKEWKDAADAFR 121

Query: 153 IVLEAD---------------RDNVP-------------------ALLGQACVEFNRGRY 178
              EAD                D  P                   AL GQA      GR+
Sbjct: 122 RAFEADASRSDAMLGLGIALIHDGHPGDALMPLEKYLSLFPNHEQALFGQAVALQQTGRH 181

Query: 179 SDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA 238
           ++S+E Y++ L  +P C                                    EAL  L 
Sbjct: 182 AESVEQYRKVLSRNPKCE-----------------------------------EALSNLV 206

Query: 239 VMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVT 298
            M ++  +   +R+  E +    E+ P   +A   LA   F  G +    +   T   + 
Sbjct: 207 AMFIEKKDHESVRRYAEML---CELQPDSPVATEALATLAFQDGDYLSAARHCRT---LC 260

Query: 299 NHGPTKSHSYYNLARSYHSKGDYEKAGLYY--MASVKEINKPHEFIFPYYGLGQVQLKLG 356
              P +  +++NL  ++H  G+Y+KA   Y   AS++  +        +  LG  Q +L 
Sbjct: 261 ESAPDRFENWFNLGVAHHKMGNYDKAAQAYRQAASLQPSSAQS-----HLNLGVAQQELN 315

Query: 357 DFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDL 416
           D   A  ++E  L I P+    L  L  +  Q G+ + A++L  +  +  P    A   L
Sbjct: 316 DLAGARASYEHALNIDPNQSGVLWNLALVLEQQGERQWAEKLYARINEDAPEWGDACFRL 375

Query: 417 GEL-LISSDTGAALDAFKT--ARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKD 473
           G L L+  D   + +AF+   A  L      + P E   N G+ +   G   +A +SF++
Sbjct: 376 GYLRLLRGDYINSAEAFEACLAHRL------DWP-EAHLNAGIAYARNGNAPAARKSFQE 428

Query: 474 AL 475
            L
Sbjct: 429 VL 430



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 67/305 (21%), Positives = 112/305 (36%), Gaps = 44/305 (14%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
           A +   KA      EPS +   G +     + E A   +  + E D  +  A   +    
Sbjct: 48  AARLLTKAIEDGEREPSLYSALGHIQYEMRDYEAAGRTYSQLSEIDSQHRTAHFNRGVCL 107

Query: 173 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 232
            N   + D+ + ++RA +   S   A+ LG+G+     G  G A    ++ L L P + +
Sbjct: 108 GNLKEWKDAADAFRRAFEADASRSDAM-LGLGIALIHDGHPGDALMPLEKYLSLFPNHEQ 166

Query: 233 ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTE 292
           AL   AV   Q    A   + +E+ ++     P C  AL+ L   F     H  V +  E
Sbjct: 167 ALFGQAVALQQTGRHA---ESVEQYRKVLSRNPKCEEALSNLVAMFIEKKDHESVRRYAE 223

Query: 293 TALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQ 352
               +    P  + +   LA                                        
Sbjct: 224 MLCELQPDSPVATEALATLA---------------------------------------- 243

Query: 353 LKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQA 412
            + GD+ SA  +   + E  PD  E    LG  + ++G  +KA +  R+AA + P  AQ+
Sbjct: 244 FQDGDYLSAARHCRTLCESAPDRFENWFNLGVAHHKMGNYDKAAQAYRQAASLQPSSAQS 303

Query: 413 FIDLG 417
            ++LG
Sbjct: 304 HLNLG 308



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 64/277 (23%), Positives = 118/277 (42%), Gaps = 21/277 (7%)

Query: 203 IGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFE 262
           +G+  +K+G   KA QA+++A  L P + ++ + L V   + N+ AG R   E    A  
Sbjct: 273 LGVAHHKMGNYDKAAQAYRQAASLQPSSAQSHLNLGVAQQELNDLAGARASYE---HALN 329

Query: 263 IYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYE 322
           I P  +  L  LA      G+    E+L      +    P    + + L      +GDY 
Sbjct: 330 IDPNQSGVLWNLALVLEQQGERQWAEKLYAR---INEDAPEWGDACFRLGYLRLLRGDYI 386

Query: 323 KAGLYYMASVKEINKPHEFIFP--YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLK 380
            +   + A +      H   +P  +   G    + G+  +A  +F++VL + PD+ + ++
Sbjct: 387 NSAEAFEACLA-----HRLDWPEAHLNAGIAYARNGNAPAARKSFQEVLTLRPDSSDAVR 441

Query: 381 ALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLK 440
            L  + ++  +  +A +L R+  ++     + F + G  LI    G   DA        +
Sbjct: 442 GLAALALEQEEFTEAYDLHRRLIELGEHSPELFYNAG--LICQKQGQTQDAV----GFYQ 495

Query: 441 KAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDAL 475
           +A  E P   E L N+G      G+ E A   ++ A+
Sbjct: 496 QALNEDPQFAEALLNLGHALMSMGQEEEARSYWRRAI 532



 Score = 52.8 bits (125), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 95/436 (21%), Positives = 172/436 (39%), Gaps = 76/436 (17%)

Query: 347 GLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKID 406
           GLG   +  G    AL   EK L ++P++ + L        Q G+  ++ E  RK    +
Sbjct: 136 GLGIALIHDGHPGDALMPLEKYLSLFPNHEQALFGQAVALQQTGRHAESVEQYRKVLSRN 195

Query: 407 PRDAQAFIDLGELLIS------------------SDTGAALDAFKT-------------- 434
           P+  +A  +L  + I                    D+  A +A  T              
Sbjct: 196 PKCEEALSNLVAMFIEKKDHESVRRYAEMLCELQPDSPVATEALATLAFQDGDYLSAARH 255

Query: 435 ARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVID 494
            RTL + A +    E   N+GV H + G ++ A Q+++ A       +L  S  +++ ++
Sbjct: 256 CRTLCESAPDR--FENWFNLGVAHHKMGNYDKAAQAYRQAA------SLQPSSAQSH-LN 306

Query: 495 ASASMLQFKDMQLFH-RFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILF 553
              +  +  D+      +E+  N   +  N+  VL+NLA +LEQ  +   A  LY  I  
Sbjct: 307 LGVAQQELNDLAGARASYEHALN---IDPNQSGVLWNLALVLEQQGERQWAEKLYARINE 363

Query: 554 KYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAK 613
              ++ DA  RL  +   R +   S E     L     +P A    G    +N +   A+
Sbjct: 364 DAPEWGDACFRLGYLRLLRGDYINSAEAFEACLAHRLDWPEAHLNAGIAYARNGNAPAAR 423

Query: 614 ETFRAA----SDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVI- 668
           ++F+       D++D     A L+                  LE     +A +L+ R+I 
Sbjct: 424 KSFQEVLTLRPDSSDAVRGLAALA------------------LEQEEFTEAYDLHRRLIE 465

Query: 669 -VQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQ 727
             +H+  L+    AG++  ++GQ   ++D     Q+A +     Q  +  +NL H   + 
Sbjct: 466 LGEHSPELF--YNAGLICQKQGQ---TQDAVGFYQQALNED--PQFAEALLNLGHALMSM 518

Query: 728 GNFALAMKMYQNCLRK 743
           G    A   ++  +R+
Sbjct: 519 GQEEEARSYWRRAIRE 534



 Score = 47.4 bits (111), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 86/397 (21%), Positives = 143/397 (36%), Gaps = 74/397 (18%)

Query: 56  VEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQ 115
           VEQ+R++L    +P+ +E          A+ N + ++      IE K  E         +
Sbjct: 185 VEQYRKVLSR--NPKCEE----------ALSNLVAMF------IEKKDHES------VRR 220

Query: 116 YYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNR 175
           Y      +    P        L    G+   A+   + + E+  D               
Sbjct: 221 YAEMLCELQPDSPVATEALATLAFQDGDYLSAARHCRTLCESAPDRFENWFNLGVAHHKM 280

Query: 176 GRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV 235
           G Y  + + Y++A  + PS   +  L +G+ + +L  L  AR +++ AL +DP     L 
Sbjct: 281 GNYDKAAQAYRQAASLQPSSAQS-HLNLGVAQQELNDLAGARASYEHALNIDPNQSGVLW 339

Query: 236 ALAVMDLQANEAAGIRKGMEKM-QRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETA 294
            LA++     E  G R+  EK+  R  E  P    A   L       G +    +  E  
Sbjct: 340 NLALV----LEQQGERQWAEKLYARINEDAPEWGDACFRLGYLRLLRGDYINSAEAFEAC 395

Query: 295 LAVTNHGPTKSHSYYNLARSYHSKGDYEKA-------------------GLYYMASVKEI 335
           LA   H      ++ N   +Y   G+   A                   GL  +A  +E 
Sbjct: 396 LA---HRLDWPEAHLNAGIAYARNGNAPAARKSFQEVLTLRPDSSDAVRGLAALALEQE- 451

Query: 336 NKPHEFIFPY-----------------YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCET 378
               EF   Y                 Y  G +  K G  + A+  +++ L   P   E 
Sbjct: 452 ----EFTEAYDLHRRLIELGEHSPELFYNAGLICQKQGQTQDAVGFYQQALNEDPQFAEA 507

Query: 379 LKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFID 415
           L  LGH  + +GQ E+A+   R+A +  P  AQ + +
Sbjct: 508 LLNLGHALMSMGQEEEARSYWRRAIREKPELAQTYFE 544


>gi|124006078|ref|ZP_01690914.1| TPR repeat [Microscilla marina ATCC 23134]
 gi|123988255|gb|EAY27908.1| TPR repeat [Microscilla marina ATCC 23134]
          Length = 316

 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 68/265 (25%), Positives = 115/265 (43%), Gaps = 32/265 (12%)

Query: 89  LGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQAS 148
           LGV Y +L        +K E  I+A   Y KA  I     + W+  G +    G+   A 
Sbjct: 47  LGVNYEWL--------DKYEEAIIA---YQKAIEIKPGYENAWINLGVVYKGLGKYNDAI 95

Query: 149 SAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRY 208
           +A++  +E + +   A         + G+Y D++  Y+RA+++ P+   A  + +G+   
Sbjct: 96  TAYQKAIEINPNFEQAWANLGVTYDDLGKYEDAIVAYQRAIEIRPNYEKA-WVNLGVVYK 154

Query: 209 KLGQLGKARQAFQRALQLDPENVEALVALAVM--DLQANEAAGIRKGMEKMQRAFEIYPY 266
            LG+   A  A+Q+A+ + P+  +A + L V   DL   E A +       Q+A E    
Sbjct: 155 SLGKYDDAIAAYQKAIGIKPDFEQAWINLGVTYDDLNNYEEAIV-----AYQKAIEFNSA 209

Query: 267 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGL 326
               L  +   +F  G+    +   E ++ +       SHS  NL   Y ++GD +KA  
Sbjct: 210 NKELLLDIGWLYFIQGKSQSAKPYFEQSIEL-------SHSQMNLGHVYLTEGDAQKAME 262

Query: 327 YYMASVKEINKPHEFI------FPY 345
           +Y  S+  I    EF       FPY
Sbjct: 263 FYQQSLHNIEDKAEFFEGFQSDFPY 287



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 65/284 (22%), Positives = 124/284 (43%), Gaps = 20/284 (7%)

Query: 122 RIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNR-GRYSD 180
           RI  ++   W+  G      G+ E A  A++  +   R N         V +    +Y +
Sbjct: 1   RIQPNDEDIWINLGVAYEGLGKYEDAIVAYQKAI-GIRPNYEKAWFNLGVNYEWLDKYEE 59

Query: 181 SLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVM 240
           ++  Y++A+++ P    A  + +G+    LG+   A  A+Q+A++++P   +A   L V 
Sbjct: 60  AIIAYQKAIEIKPGYENA-WINLGVVYKGLGKYNDAITAYQKAIEINPNFEQAWANLGVT 118

Query: 241 --DLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVT 298
             DL   E A +       QRA EI P    A   L   +   G++       + A+ + 
Sbjct: 119 YDDLGKYEDAIV-----AYQRAIEIRPNYEKAWVNLGVVYKSLGKYDDAIAAYQKAIGIK 173

Query: 299 NHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDF 358
              P    ++ NL  +Y    +YE+A + Y  +++  +   E +     +G +    G  
Sbjct: 174 ---PDFEQAWINLGVTYDDLNNYEEAIVAYQKAIEFNSANKELLLD---IGWLYFIQGKS 227

Query: 359 RSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKA 402
           +SA   FE+ +E+      +   LGH+Y+  G  +KA E  +++
Sbjct: 228 QSAKPYFEQSIEL----SHSQMNLGHVYLTEGDAQKAMEFYQQS 267



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 56/199 (28%), Positives = 98/199 (49%), Gaps = 17/199 (8%)

Query: 302 PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSA 361
           P    +++NL  +Y     YE+A + Y  ++ EI   +E    +  LG V   LG +  A
Sbjct: 38  PNYEKAWFNLGVNYEWLDKYEEAIIAYQKAI-EIKPGYEN--AWINLGVVYKGLGKYNDA 94

Query: 362 LTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLI 421
           +T ++K +EI P+  +    LG  Y  LG+ E A    ++A +I P   +A+++LG +  
Sbjct: 95  ITAYQKAIEINPNFEQAWANLGVTYDDLGKYEDAIVAYQRAIEIRPNYEKAWVNLGVVYK 154

Query: 422 S-SDTGAALDAFKTARTLLKKAGEEVPIEV------LNNI--GVIHFEKG-EFESAHQSF 471
           S      A+ A++ A   +K   E+  I +      LNN    ++ ++K  EF SA+   
Sbjct: 155 SLGKYDDAIAAYQKAIG-IKPDFEQAWINLGVTYDDLNNYEEAIVAYQKAIEFNSAN--- 210

Query: 472 KDALGDGIWLTLLDSKTKT 490
           K+ L D  WL  +  K+++
Sbjct: 211 KELLLDIGWLYFIQGKSQS 229


>gi|428320933|ref|YP_007118815.1| Tetratricopeptide TPR_2 repeat-containing protein [Oscillatoria
           nigro-viridis PCC 7112]
 gi|428244613|gb|AFZ10399.1| Tetratricopeptide TPR_2 repeat-containing protein [Oscillatoria
           nigro-viridis PCC 7112]
          Length = 471

 Score = 65.5 bits (158), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 99/458 (21%), Positives = 179/458 (39%), Gaps = 52/458 (11%)

Query: 185 YKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQA 244
           Y RA+++ P    A     G  RY LG    A   F +A++L P+  EA     +   + 
Sbjct: 32  YNRAIELQPDDALAY-YNRGNVRYNLGDKKGAIADFNKAIELQPDLAEAYGNRGLFRSEL 90

Query: 245 NEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG--- 301
            +  G    +  + +A E+ P  A+A         +  +  +  +L +   A+ ++    
Sbjct: 91  GDKKGA---IADLNKAIELQPDLALA---------YVNRGAVRSKLGDKKGAIADYNKAI 138

Query: 302 ---PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDF 358
              P  + +YYN        GD + A   Y  +++   KP +    YY  G V+ +LGD 
Sbjct: 139 ELQPDYAQAYYNRGLVRSELGDKKGAIADYNKAIEL--KP-DLALAYYNRGLVRSELGDK 195

Query: 359 RSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGE 418
           + A+ ++ K +E+ PD  +     G +  +LG  + A   L K  ++ P  AQA+ + G 
Sbjct: 196 KGAIADYNKAIELQPDYAQAYGNRGTVRSELGDKKGAIADLNKVIELKPDLAQAYYNRG- 254

Query: 419 LLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDAL- 475
            L  S+ G      K A     KA E  P   +     G + +  G+ + A   F  A+ 
Sbjct: 255 -LFRSELGDK----KGAIADFNKAIELQPDDAQAYYKRGNVRYILGDKKGAITDFNKAIE 309

Query: 476 --GDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLAR 533
              D  +        +  + D   ++  +               +EL  +     FN   
Sbjct: 310 LQPDDAFAYYNRGNVRYILGDKKGAIADYN------------KAIELKPDDAQAYFNRGN 357

Query: 534 LLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVN---- 589
           +  ++ D       Y  ++    DY DAY+    +     + + +I  +N+A+++     
Sbjct: 358 VRSELGDKKGEIADYNKVIELQPDYADAYINRGLVRYDLGDKKGAIADLNKAIELQPDYA 417

Query: 590 ---GKYPNALSMLGDLELKNDDWVKAKETFRAASDATD 624
              G   N    LGD +   +D  KA + F+A     D
Sbjct: 418 FAYGNRGNVRYNLGDKKGAIEDLQKAAQLFKAQGQMAD 455



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 79/369 (21%), Positives = 145/369 (39%), Gaps = 38/369 (10%)

Query: 118 NKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGR 177
           NKA  +       +V +G +    G+ + A + +   +E   D   A   +  V    G 
Sbjct: 101 NKAIELQPDLALAYVNRGAVRSKLGDKKGAIADYNKAIELQPDYAQAYYNRGLVRSELGD 160

Query: 178 YSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVAL 237
              ++  Y +A+++ P    A     GL R +LG    A   + +A++L P+  +A    
Sbjct: 161 KKGAIADYNKAIELKPDLALAY-YNRGLVRSELGDKKGAIADYNKAIELQPDYAQAYGNR 219

Query: 238 AVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAV 297
             +  +  +  G    +  + +  E+ P  A A         +  +     +L +   A+
Sbjct: 220 GTVRSELGDKKGA---IADLNKVIELKPDLAQA---------YYNRGLFRSELGDKKGAI 267

Query: 298 TNHG------PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEF----IFPYYG 347
            +        P  + +YY      +  GD + A       + + NK  E      F YY 
Sbjct: 268 ADFNKAIELQPDDAQAYYKRGNVRYILGDKKGA-------ITDFNKAIELQPDDAFAYYN 320

Query: 348 LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 407
            G V+  LGD + A+ ++ K +E+ PD+ +     G++  +LG  +       K  ++ P
Sbjct: 321 RGNVRYILGDKKGAIADYNKAIELKPDDAQAYFNRGNVRSELGDKKGEIADYNKVIELQP 380

Query: 408 RDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVL--NNIGVIHFEKGEFE 465
             A A+I+ G  L+  D G      K A   L KA E  P       N G + +  G+ +
Sbjct: 381 DYADAYINRG--LVRYDLGDK----KGAIADLNKAIELQPDYAFAYGNRGNVRYNLGDKK 434

Query: 466 SAHQSFKDA 474
            A +  + A
Sbjct: 435 GAIEDLQKA 443



 Score = 47.4 bits (111), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 67/294 (22%), Positives = 118/294 (40%), Gaps = 20/294 (6%)

Query: 117 YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 176
           YNKA  +       +  +G +    G+ + A + +   +E   D   A   +  V    G
Sbjct: 168 YNKAIELKPDLALAYYNRGLVRSELGDKKGAIADYNKAIELQPDYAQAYGNRGTVRSELG 227

Query: 177 RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVA 236
               ++    + +++ P    A     GL R +LG    A   F +A++L P++ +A   
Sbjct: 228 DKKGAIADLNKVIELKPDLAQAY-YNRGLFRSELGDKKGAIADFNKAIELQPDDAQAYYK 286

Query: 237 LAVMDLQANEAAGIRKG-MEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETAL 295
                       G +KG +    +A E+ P  A A     N  +  G         + A+
Sbjct: 287 RG----NVRYILGDKKGAITDFNKAIELQPDDAFAYYNRGNVRYILGDK-------KGAI 335

Query: 296 AVTNHG----PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQV 351
           A  N      P  + +Y+N        GD +K  +     V E+ +P ++   Y   G V
Sbjct: 336 ADYNKAIELKPDDAQAYFNRGNVRSELGD-KKGEIADYNKVIEL-QP-DYADAYINRGLV 392

Query: 352 QLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKI 405
           +  LGD + A+ +  K +E+ PD        G++   LG  + A E L+KAA++
Sbjct: 393 RYDLGDKKGAIADLNKAIELQPDYAFAYGNRGNVRYNLGDKKGAIEDLQKAAQL 446


>gi|440753799|ref|ZP_20933001.1| kinase domain protein [Microcystis aeruginosa TAIHU98]
 gi|440174005|gb|ELP53374.1| kinase domain protein [Microcystis aeruginosa TAIHU98]
          Length = 717

 Score = 65.5 bits (158), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 85/351 (24%), Positives = 157/351 (44%), Gaps = 31/351 (8%)

Query: 134 KGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHP 193
           +GQ          A +++   L+ + D + AL G+A       RYS++L  Y++A+Q++P
Sbjct: 348 QGQTFYQLKRYTDALNSYGQALKINPDYLEALQGKADALLALKRYSEALNTYEKAIQINP 407

Query: 194 SCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKG 253
                  LG G    KL +  +A ++F+R L L+P   +A    A + L+  + +  +K 
Sbjct: 408 DSAWQAWLGRGEALDKLDKNQEALESFERVLSLNPAASQAWQGKADIYLELQQYSAAQKA 467

Query: 254 MEKM----QRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGP----TKS 305
           ++K+    Q   +I+     +L  L +   + G     +Q    ALA+ +        K 
Sbjct: 468 LDKLLTFQQNDAKIWYKKGWSLQNLED---YEGAVKAYDQ----ALAIESDNALIWYQKG 520

Query: 306 HSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNF 365
           +S Y L +  ++   Y KAG +          P +F   +Y  G +  KLG    AL  F
Sbjct: 521 NSLYQLNKINNALESYSKAGQF---------NP-QFSQAHYSQGIILQKLGRNSEALEAF 570

Query: 366 EKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SD 424
            +  +   +  +     G +  QL + ++A     KA +I  R ++ FI +G       D
Sbjct: 571 TQATKANSNYYQAWLNQGALLHQLERFQEAIASYEKARRISSRKSEVFIGIGNACYRLGD 630

Query: 425 TGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
              A+ A++ A    K    + P E   ++G   F+ G++E A Q+++++L
Sbjct: 631 YSQAITAYQQAIQRQK----DNP-ETWKSLGNSWFKLGQYERAIQAYQESL 676



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 69/326 (21%), Positives = 131/326 (40%), Gaps = 52/326 (15%)

Query: 80  YERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLL 139
           YE+   +N    +  +LG+ E   +  +    L +  + +   ++      W GK  + L
Sbjct: 399 YEKAIQINPDSAWQAWLGRGEALDKLDKNQEALES--FERVLSLNPAASQAWQGKADIYL 456

Query: 140 AKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAI 199
              +   A  A   +L   +++      +     N   Y  +++ Y +AL +  S    I
Sbjct: 457 ELQQYSAAQKALDKLLTFQQNDAKIWYKKGWSLQNLEDYEGAVKAYDQALAIE-SDNALI 515

Query: 200 RLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQR 259
               G   Y+L ++  A +++ +A Q +P+  +A  +  ++             ++K+ R
Sbjct: 516 WYQKGNSLYQLNKINNALESYSKAGQFNPQFSQAHYSQGII-------------LQKLGR 562

Query: 260 AFEIYPYCAMALNYLANHF-FFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSK 318
             E       A    +N++  +  Q  L+ QL     A+ +         Y  AR   S+
Sbjct: 563 NSEALEAFTQATKANSNYYQAWLNQGALLHQLERFQEAIAS---------YEKARRISSR 613

Query: 319 GDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCET 378
                             K   FI    G+G    +LGD+  A+T +++ ++   DN ET
Sbjct: 614 ------------------KSEVFI----GIGNACYRLGDYSQAITAYQQAIQRQKDNPET 651

Query: 379 LKALGHIYVQLGQIEKA----QELLR 400
            K+LG+ + +LGQ E+A    QE LR
Sbjct: 652 WKSLGNSWFKLGQYERAIQAYQESLR 677


>gi|386813638|ref|ZP_10100862.1| conserved hypothetical protein [planctomycete KSU-1]
 gi|386403135|dbj|GAB63743.1| conserved hypothetical protein [planctomycete KSU-1]
          Length = 405

 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 86/357 (24%), Positives = 146/357 (40%), Gaps = 68/357 (19%)

Query: 143 EVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLG 202
           ++++A   +  V+EAD +   A  G+  V F   R  D+   +++A+ V  +   A +  
Sbjct: 41  KLDEALVEYTKVIEADPNLAEAYYGRGKVYFELERLEDAAADFRKAIDVKSNYIDAHK-K 99

Query: 203 IGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVM------DLQANEAAGIRKGMEK 256
           +     K+G      Q   +A+Q DP+N    V L V       D+ A         +E+
Sbjct: 100 LAETFMKIGAPDDEFQKRFKAIQNDPDNAMGYVDLGVFYHKLEKDIDA---------IEQ 150

Query: 257 MQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYH 316
            ++A E+ P  +  L  L   +   G +   E + + A+ +    PT  +++YNLA + H
Sbjct: 151 YKQALELDPNNSFILYNLGVGYLDMGLYEDAETIFKQAIEIN---PTHDNAHYNLAVALH 207

Query: 317 SKGDYEKAGLYYMASVKEINKPHEFIFPYYG-----LGQVQLKLGDFRSALTNFEKVLEI 371
            +G  ++        +KE+NK  E + P Y       G ++L+   F  A+  + K +EI
Sbjct: 208 KRGKIDEC-------IKELNKTLE-VNPKYSNSYVIFGLIKLREKKFDEAIAQYNKAMEI 259

Query: 372 YPDN---------------------CETLKAL-------------GHIYVQLGQIEKAQE 397
            PDN                      E +K L             G IY +  +++KA E
Sbjct: 260 DPDNLEARYQRAIVFALQERYDDALAENMKILEKNPKHASAAYNIGVIYHRTDRLDKAME 319

Query: 398 LLRKAA-KIDPRDAQAFIDLGELL-ISSDTGAALDAFKTARTLLKKAGEEVPIEVLN 452
              K A KIDP    A+   G+L  +  D   A   + T   + K    + P  V N
Sbjct: 320 WYDKVAKKIDPLYEDAYYTRGQLYSMKGDHSKAYSDYLTYAMITKWRTGKDPAVVYN 376



 Score = 47.4 bits (111), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 63/133 (47%), Gaps = 8/133 (6%)

Query: 345 YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAK 404
           YYG G+V  +L     A  +F K +++  +  +  K L   ++++G  +   +   KA +
Sbjct: 63  YYGRGKVYFELERLEDAAADFRKAIDVKSNYIDAHKKLAETFMKIGAPDDEFQKRFKAIQ 122

Query: 405 IDPRDAQAFIDLGELL--ISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKG 462
            DP +A  ++DLG     +  D   A++ +K A  L           +L N+GV + + G
Sbjct: 123 NDPDNAMGYVDLGVFYHKLEKDID-AIEQYKQALELDPNNS-----FILYNLGVGYLDMG 176

Query: 463 EFESAHQSFKDAL 475
            +E A   FK A+
Sbjct: 177 LYEDAETIFKQAI 189



 Score = 45.8 bits (107), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 60/277 (21%), Positives = 105/277 (37%), Gaps = 54/277 (19%)

Query: 89  LGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQAS 148
           LGV+Y            K E  I A + Y +A  +D +        G   L  G  E A 
Sbjct: 134 LGVFY-----------HKLEKDIDAIEQYKQALELDPNNSFILYNLGVGYLDMGLYEDAE 182

Query: 149 SAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRY 208
           + FK  +E +  +  A    A     RG+  + ++   + L+V+P    +  +  GL + 
Sbjct: 183 TIFKQAIEINPTHDNAHYNLAVALHKRGKIDECIKELNKTLEVNPKYSNSYVI-FGLIKL 241

Query: 209 KLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCA 268
           +  +  +A   + +A+++DP+N+EA                      + QRA        
Sbjct: 242 REKKFDEAIAQYNKAMEIDPDNLEA----------------------RYQRA-------- 271

Query: 269 MALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYY 328
                      F  Q    + L E  + +    P  + + YN+   YH     +KA  +Y
Sbjct: 272 ---------IVFALQERYDDALAEN-MKILEKNPKHASAAYNIGVIYHRTDRLDKAMEWY 321

Query: 329 MASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNF 365
               K+I+  +E    YY  GQ+    GD   A +++
Sbjct: 322 DKVAKKIDPLYE--DAYYTRGQLYSMKGDHSKAYSDY 356


>gi|363732735|ref|XP_003641145.1| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit isoform
           2 [Gallus gallus]
          Length = 1045

 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 86/386 (22%), Positives = 164/386 (42%), Gaps = 24/386 (6%)

Query: 93  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 152
           Y+ LG +  ++ + +E    A ++Y  A R+       ++     L+A G++E A  A+ 
Sbjct: 92  YSNLGNVYKERGQLQE----AIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 147

Query: 153 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 210
             L+ + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 148 SALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIETQPNFAVAWS-NLGCVFNAQ 204

Query: 211 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 270
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 205 GEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAAYLRALSLSPNHAVV 261

Query: 271 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 330
              LA  ++  G   L       A+ +  H P    +Y NLA +   KG   +A   Y  
Sbjct: 262 HGNLACVYYEQGLIDLAIDTYRRAIELQPHFPD---AYCNLANALKEKGSVAEAEECYNT 318

Query: 331 SVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLG 390
           +++      + +     L  ++ + G+   A+  + K LE++P+       L  +  Q G
Sbjct: 319 ALRLCPTHADSL---NNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQG 375

Query: 391 QIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGEEVPIE 449
           ++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +          +
Sbjct: 376 KLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA-----D 430

Query: 450 VLNNIGVIHFEKGEFESAHQSFKDAL 475
             +N+  IH + G    A  S++ AL
Sbjct: 431 AHSNLASIHKDSGNIPEAIASYRTAL 456



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 102/478 (21%), Positives = 190/478 (39%), Gaps = 27/478 (5%)

Query: 142 GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 201
           G+ E A      +   + DN   LL  + + F   R   S  F   A++ +P    A   
Sbjct: 35  GDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYS- 93

Query: 202 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 261
            +G    + GQL +A + ++ AL+L P+ ++  + LA   + A +  G    ++    A 
Sbjct: 94  NLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEG---AVQAYVSAL 150

Query: 262 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 319
           +  P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G
Sbjct: 151 QYNPDLYCVRS--DLGNLLKALGR---LEEAKACYLKAIETQPNFAVAWSNLGCVFNAQG 205

Query: 320 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 379
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++    
Sbjct: 206 EIWLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVH 262

Query: 380 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLL 439
             L  +Y + G I+ A +  R+A ++ P    A+ +L   L   + G+  +A +   T L
Sbjct: 263 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANAL--KEKGSVAEAEECYNTAL 320

Query: 440 KKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASM 499
           +        + LNN+  I  E+G  E A + ++ AL       +       +   AS   
Sbjct: 321 RLCPTHA--DSLNNLANIKREQGNIEEAVRLYRKAL------EVFPEFAAAHSNLASVLQ 372

Query: 500 LQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYV 559
            Q K  +    ++     + +         N+   L+++ D   A   Y   +     + 
Sbjct: 373 QQGKLQEALMHYKEA---IRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA 429

Query: 560 DAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFR 617
           DA+  LA+I K   N+  +I     ALK+   +P+A   L        DW    E  +
Sbjct: 430 DAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMK 487



 Score = 43.5 bits (101), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 77/347 (22%), Positives = 140/347 (40%), Gaps = 57/347 (16%)

Query: 278 FFFTGQHFLVEQLTETA----LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK 333
              +  HF   +L  +A    LA+    P  + +Y NL   Y  +G  ++A  +Y  +++
Sbjct: 59  LLLSSIHFQCRRLDRSAHFSTLAI-KQNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALR 117

Query: 334 EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIE 393
              KP +FI  Y  L    +  GD   A+  +   L+  PD       LG++   LG++E
Sbjct: 118 L--KP-DFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLE 174

Query: 394 KAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNN 453
           +A+    KA +  P  A A+ +LG                    +    GE         
Sbjct: 175 EAKACYLKAIETQPNFAVAWSNLG-------------------CVFNAQGEIW------- 208

Query: 454 IGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVID-ASASMLQFKDMQLFHRFE 512
           + + HFEK    +   +F DA     ++ L +   +  + D A A+ L+   +       
Sbjct: 209 LAIHHFEKAV--TLDPNFLDA-----YINLGNVLKEARIFDRAVAAYLRALSLS------ 255

Query: 513 NDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKAR 572
              NH  +  N   V +    L++   DT      YR  +     + DAY  LA   K +
Sbjct: 256 --PNHAVVHGNLACVYYEQG-LIDLAIDT------YRRAIELQPHFPDAYCNLANALKEK 306

Query: 573 NNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAA 619
            ++  + E  N AL++   + ++L+ L +++ +  +  +A   +R A
Sbjct: 307 GSVAEAEECYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKA 353


>gi|295677297|ref|YP_003605821.1| hypothetical protein BC1002_2251 [Burkholderia sp. CCGE1002]
 gi|295437140|gb|ADG16310.1| TPR repeat-containing protein [Burkholderia sp. CCGE1002]
          Length = 628

 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 69/274 (25%), Positives = 118/274 (43%), Gaps = 40/274 (14%)

Query: 176 GRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV 235
           GR  D+   Y+  L  +PS   A+ L +G+ R++ GQ  +A    +RA+ L PE+     
Sbjct: 28  GRLDDAERGYRATLDHNPSHVDALHL-LGVLRHQQGQHAEAAALVRRAVDLRPEDA---- 82

Query: 236 ALAVMDLQANEAAG-IRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETA 294
           AL +    A +A G I   +E+ + A  + P   MA   L N +   G+H       E +
Sbjct: 83  ALQLNLGNALKALGQIDAAIEQFRNALTLAPTFPMAHYNLGNAYASLGRHEDAADAFERS 142

Query: 295 LAVTNHGPTKSHSYYNLARSYHSKGDYEKA----------------GLYYMA-SVKEINK 337
           L +    P  + S+ NL  + H+ G + +A                 L  M  S+  +++
Sbjct: 143 LRLQ---PEDASSHNNLGNALHALGRHAEAIASFRRALELRPGHAGALNNMGMSLNALDR 199

Query: 338 PHE--------------FIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALG 383
           P E              F+  ++ L       G    A+ +FE  L + P+    +  +G
Sbjct: 200 PDEAVPCFEAALAVEPRFVAAHFNLANTFDATGRHAQAVASFEAALRLQPNLPPAIYGMG 259

Query: 384 HIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 417
           +    LG+ E+A   L +A  +DP+ A A++ LG
Sbjct: 260 NALAALGRAEQALPYLERAVGLDPQFALAWLALG 293



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 64/242 (26%), Positives = 107/242 (44%), Gaps = 14/242 (5%)

Query: 176 GRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV 235
           G+   ++E ++ AL + P+ P A    +G     LG+   A  AF+R+L+L PE+  +  
Sbjct: 96  GQIDAAIEQFRNALTLAPTFPMA-HYNLGNAYASLGRHEDAADAFERSLRLQPEDASSHN 154

Query: 236 ALAVMDLQANEAAGIR-KGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETA 294
            L      A  A G   + +   +RA E+ P  A ALN +        +        E A
Sbjct: 155 NLG----NALHALGRHAEAIASFRRALELRPGHAGALNNMGMSLNALDRPDEAVPCFEAA 210

Query: 295 LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK-EINKPHEFIFPYYGLGQVQL 353
           LAV    P    +++NLA ++ + G + +A   + A+++ + N P       YG+G    
Sbjct: 211 LAVE---PRFVAAHFNLANTFDATGRHAQAVASFEAALRLQPNLPPAI----YGMGNALA 263

Query: 354 KLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAF 413
            LG    AL   E+ + + P       ALG  +  LG    A   L +A ++ P  A A 
Sbjct: 264 ALGRAEQALPYLERAVGLDPQFALAWLALGTAHQALGAHAAAVRALDQALRLRPDLASAH 323

Query: 414 ID 415
           ++
Sbjct: 324 MN 325



 Score = 40.4 bits (93), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 40/162 (24%), Positives = 69/162 (42%), Gaps = 9/162 (5%)

Query: 296 AVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKL 355
           A  +H P+   + + L    H +G + +A      +V    +P +       LG     L
Sbjct: 39  ATLDHNPSHVDALHLLGVLRHQQGQHAEAAALVRRAVDL--RPEDAAL-QLNLGNALKAL 95

Query: 356 GDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFID 415
           G   +A+  F   L + P        LG+ Y  LG+ E A +   ++ ++ P DA +  +
Sbjct: 96  GQIDAAIEQFRNALTLAPTFPMAHYNLGNAYASLGRHEDAADAFERSLRLQPEDASSHNN 155

Query: 416 LGELLISSDTGA-ALDAFKTARTLLKKAGEEVPIEVLNNIGV 456
           LG  L +    A A+ +F+  R L  + G       LNN+G+
Sbjct: 156 LGNALHALGRHAEAIASFR--RALELRPGHA---GALNNMGM 192


>gi|118383764|ref|XP_001025036.1| TPR Domain containing protein [Tetrahymena thermophila]
 gi|89306803|gb|EAS04791.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
          Length = 670

 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 79/348 (22%), Positives = 157/348 (45%), Gaps = 26/348 (7%)

Query: 135 GQLLLAKGEV--EQASSAFKIVLE-----ADRDNVPALLGQACVEFNRGRYSDSLEFYKR 187
            Q L+A+ +   ++   +F+I+ E        D   A +G+ C  +   +Y  S  F  +
Sbjct: 302 SQFLIAQSKFVEKEFQKSFEIIQELVYKNPYNDEYLAWMGRIC--YALEKYEISEYFCYQ 359

Query: 188 ALQVHPSCPGA-IRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANE 246
            L+++     A   LGI    Y+  +L K    +Q+A+Q++P N+ AL  L +    +N+
Sbjct: 360 TLKLNKENDLAYFILGINNTHYEFLELAKV--YYQKAIQINPNNILALNNLGLAFQHSNQ 417

Query: 247 AAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSH 306
                  ++  Q A +I P     LN     F+  GQ+       + AL + +   +   
Sbjct: 418 ---FEFSLQTYQNALKISPNDIDILNNQGTLFYKLGQYEKAIASFKKALRINSEHNS--- 471

Query: 307 SYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFE 366
           SY+NL   Y     Y K+  Y+ + VK     +E +F    LG    ++ + + +L  F 
Sbjct: 472 SYFNLGMLYLKMQKYNKSIKYFESLVKMTPLDNEALF---HLGFSYKQVQNHQKSLKYFY 528

Query: 367 KVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTG 426
           + L+I P   + L  +G +Y++    +K+   L+++ ++ P   +  I+LG   +  +  
Sbjct: 529 QALKIAPQKAKYLFNIGQVYMEKLLKQKSYTYLQRSLQLKPLSEKYVINLGVFYLQFEPE 588

Query: 427 AALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDA 474
            AL  F ++    ++  +     + N +G+ +  + + ESA + +K A
Sbjct: 589 RALQHFISSFQRFQQNEK-----ICNYLGICYSNQNQLESAFECYKKA 631



 Score = 44.7 bits (104), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 68/309 (22%), Positives = 129/309 (41%), Gaps = 51/309 (16%)

Query: 112 LATQYYNKASRIDMHEPSTWVGKGQLLLA---KGEVEQASSAFKIVLEADRDNVPALLGQ 168
           LA  YY KA +I+   P+  +    L LA     + E +   ++  L+   +++  L  Q
Sbjct: 386 LAKVYYQKAIQIN---PNNILALNNLGLAFQHSNQFEFSLQTYQNALKISPNDIDILNNQ 442

Query: 169 ACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDP 228
             + +  G+Y  ++  +K+AL+++ S   +    +G+   K+ +  K+ + F+  +++ P
Sbjct: 443 GTLFYKLGQYEKAIASFKKALRIN-SEHNSSYFNLGMLYLKMQKYNKSIKYFESLVKMTP 501

Query: 229 ENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVE 288
            + EAL  L        +    +K ++   +A +I P  A  L       F  GQ ++ +
Sbjct: 502 LDNEALFHLG---FSYKQVQNHQKSLKYFYQALKIAPQKAKYL-------FNIGQVYMEK 551

Query: 289 QLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGL 348
            L +           KS++Y  L RS   K   EK  +                     L
Sbjct: 552 LLKQ-----------KSYTY--LQRSLQLKPLSEKYVI--------------------NL 578

Query: 349 GQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPR 408
           G   L+    R AL +F    + +  N +    LG  Y    Q+E A E  +KA  +D +
Sbjct: 579 GVFYLQFEPER-ALQHFISSFQRFQQNEKICNYLGICYSNQNQLESAFECYKKAYSLDQK 637

Query: 409 DAQAFIDLG 417
           ++ A +++ 
Sbjct: 638 NSFAVMNMN 646


>gi|444917855|ref|ZP_21237942.1| hypothetical protein D187_00628 [Cystobacter fuscus DSM 2262]
 gi|444710648|gb|ELW51625.1| hypothetical protein D187_00628 [Cystobacter fuscus DSM 2262]
          Length = 379

 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/120 (36%), Positives = 64/120 (53%), Gaps = 4/120 (3%)

Query: 301 GPT-KSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFR 359
           GP  ++  YY    + + +G++E+A L   AS+KE++ P +   P   +G+V L +G   
Sbjct: 26  GPKERAEGYYIKGTTEYLQGNFEQA-LASFASMKELS-PDDPRLPA-AIGEVYLSMGKLN 82

Query: 360 SALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGEL 419
            AL  F+  L+  P        +G I+ QLG  E+AQ  LRKA  I PRD  A   LGEL
Sbjct: 83  EALAQFQLALQRDPKRSTNWSRVGFIHAQLGHTEEAQSALRKALAIYPRDFNALEQLGEL 142


>gi|428218538|ref|YP_007103003.1| hypothetical protein Pse7367_2313 [Pseudanabaena sp. PCC 7367]
 gi|427990320|gb|AFY70575.1| Tetratricopeptide TPR_1 repeat-containing protein [Pseudanabaena
           sp. PCC 7367]
          Length = 400

 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 71/277 (25%), Positives = 123/277 (44%), Gaps = 17/277 (6%)

Query: 135 GQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS 194
           G +L A G V   + A  +   A+ D V  L+ Q    + +     +L  Y++A Q+ P 
Sbjct: 55  GFILCAGGLV--GTMAIPLTAWAETDPVD-LIKQGRELWQKDNIDGALAAYRQAAQLEPD 111

Query: 195 CPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGM 254
               I+  IG    +      A  AFQ+A Q+D  +V A  AL     Q+ +     + +
Sbjct: 112 N-ARIQTSIGYLLTQKNDFAGAIAAFQKATQIDNRDVRAFNALGYAYAQSRD---YNRAL 167

Query: 255 EKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVE--QLTETALAVTNHGPTKSHSYYNLA 312
              ++A  + P  A A   +   F    Q    E  Q+ +  +A++   P    ++ NL 
Sbjct: 168 TAYRQAINLEPKNAEAHQSIG--FILVQQEKFDEAAQIYQKLIAIS---PRNLRAHLNLG 222

Query: 313 RSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIY 372
             +  KGD + A   Y+ +  EI   +  +  ++ +G + L   DF +A+  FE+VL+I 
Sbjct: 223 YIFQRKGDLKAASDIYVKA-DEIAPLNADV--WFAIGSLLLVQNDFDTAMQKFERVLDIN 279

Query: 373 PDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRD 409
           P + E   A+  + V  G++++A    RK A   P D
Sbjct: 280 PRHPEANVAIARVLVGKGEVDEAISAYRKVAAARPSD 316



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 65/133 (48%), Gaps = 8/133 (6%)

Query: 345 YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAK 404
           +  LG    +  D+  ALT + + + + P N E  +++G I VQ  + ++A ++ +K   
Sbjct: 150 FNALGYAYAQSRDYNRALTAYRQAINLEPKNAEAHQSIGFILVQQEKFDEAAQIYQKLIA 209

Query: 405 IDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPI--EVLNNIGVIHFEKG 462
           I PR+ +A ++LG +             K A  +  KA E  P+  +V   IG +   + 
Sbjct: 210 ISPRNLRAHLNLGYIFQRKGD------LKAASDIYVKADEIAPLNADVWFAIGSLLLVQN 263

Query: 463 EFESAHQSFKDAL 475
           +F++A Q F+  L
Sbjct: 264 DFDTAMQKFERVL 276



 Score = 43.1 bits (100), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 66/133 (49%), Gaps = 7/133 (5%)

Query: 78  VRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQL 137
           V+ + IA LNA  V++  +G +   Q +    F  A Q + +   I+   P   V   ++
Sbjct: 239 VKADEIAPLNA-DVWFA-IGSLLLVQND----FDTAMQKFERVLDINPRHPEANVAIARV 292

Query: 138 LLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPG 197
           L+ KGEV++A SA++ V  A   +V      A +   +   S ++  Y++ L+++P  P 
Sbjct: 293 LVGKGEVDEAISAYRKVAAARPSDVAVQYAIADLYLKKESLSGAIVAYRQILRINPDDPN 352

Query: 198 A-IRLGIGLCRYK 209
           A + LG  L + K
Sbjct: 353 ANLALGKALAQQK 365



 Score = 41.6 bits (96), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 37/170 (21%), Positives = 76/170 (44%), Gaps = 19/170 (11%)

Query: 572 RNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYAT 631
           +N+   +I    +A +++ +   A + LG    ++ D+ +A   +R A +  + K++ A 
Sbjct: 126 KNDFAGAIAAFQKATQIDNRDVRAFNALGYAYAQSRDYNRALTAYRQAIN-LEPKNAEAH 184

Query: 632 LSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQF 691
            S+G    F  ++ EK          ++A ++Y ++I     NL A    G +   KG  
Sbjct: 185 QSIG----FILVQQEK---------FDEAAQIYQKLIAISPRNLRAHLNLGYIFQRKGDL 231

Query: 692 DVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCL 741
             + D++ +  E A  +      DVW  +  +   Q +F  AM+ ++  L
Sbjct: 232 KAASDIYVKADEIAPLNA-----DVWFAIGSLLLVQNDFDTAMQKFERVL 276



 Score = 40.4 bits (93), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 36/151 (23%), Positives = 67/151 (44%), Gaps = 1/151 (0%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
           A+  Y KA  I       W   G LLL + + + A   F+ VL+ +  +  A +  A V 
Sbjct: 234 ASDIYVKADEIAPLNADVWFAIGSLLLVQNDFDTAMQKFERVLDINPRHPEANVAIARVL 293

Query: 173 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 232
             +G   +++  Y++     PS   A++  I     K   L  A  A+++ L+++P++  
Sbjct: 294 VGKGEVDEAISAYRKVAAARPSDV-AVQYAIADLYLKKESLSGAIVAYRQILRINPDDPN 352

Query: 233 ALVALAVMDLQANEAAGIRKGMEKMQRAFEI 263
           A +AL     Q    A   K + + Q+ + +
Sbjct: 353 ANLALGKALAQQKRRAEATKFLNRAQKLYTL 383


>gi|414078285|ref|YP_006997603.1| hypothetical protein ANA_C13102 [Anabaena sp. 90]
 gi|413971701|gb|AFW95790.1| TPR repeat-containing protein [Anabaena sp. 90]
          Length = 1342

 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 82/348 (23%), Positives = 148/348 (42%), Gaps = 31/348 (8%)

Query: 118  NKASRIDMHEP--STWVG-KGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFN 174
            N  S++   +P  +T+ G +G   L   E  QA + +   ++ D  N     G+      
Sbjct: 994  NDWSQVIKFDPKDATYYGLRGNTYLLSKEYRQAINDYTQAIKIDPKNANYYSGRGIAHHF 1053

Query: 175  RGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEAL 234
               Y  +++ Y  A+++ P     +R   G    +L +   A   + +A+QLDP+N    
Sbjct: 1054 LEDYKQAIDNYTEAIKIDPKKIINLR---GAAYLQLKEYKLAIDDYNQAIQLDPKNAIYY 1110

Query: 235  VALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETA 294
                   LQ  +    ++ +     A ++ P          N  ++  + F   QL +  
Sbjct: 1111 GTRGDAYLQLKD---YKQAINDYTHAIQLDP---------KNAIYYGTRGFAYLQLKDYK 1158

Query: 295  LAVTNH------GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGL 348
            LA+ ++       P  +  Y     +Y    D+++A   Y  ++K   KP +F   YY  
Sbjct: 1159 LAINDYTQAIKIDPKNATYYSARGDAYFQLKDHKQAIDDYTQAIKL--KP-DFTEAYYVR 1215

Query: 349  GQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPR 408
            G     L D++ A+ ++ + +++ PD  E    LG +  ++G++E A    R A KI+  
Sbjct: 1216 GIAHYFLKDYKQAIDDWNQAIKLKPDYPEAYTNLGIVSYEMGEVETAINYWRNAIKINSN 1275

Query: 409  DAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGEEVPIEVLNNIG 455
             A+A + LG  L    D  A L + +TA  L K+ G+   IE L   G
Sbjct: 1276 FAEAHLALGVALYGKGDQEAGLKSAETALKLDKRYGK---IEFLKENG 1320



 Score = 44.7 bits (104), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 74/417 (17%), Positives = 170/417 (40%), Gaps = 65/417 (15%)

Query: 8   VQNSEEEV----RVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQIL 63
           ++ SEE+V     + LDQ+P+++ + +            WL  A + ++  K  + R+ +
Sbjct: 513 LKKSEEDVISEYLLPLDQVPKNSDNEIS-----------WLNYANQLWRSQKYAEARKAV 561

Query: 64  EEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRI 123
            +  + + D Y A                + + G I   +++  E        Y+KA +I
Sbjct: 562 NKAIAKKPDFYQA----------------WYFKGVIFDSEKKYPESIAA----YDKALKI 601

Query: 124 DMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLE 183
           + +    W  +G+LL    +  +A ++F   +    +       +        R+ +++E
Sbjct: 602 NPNFAQAWKDRGRLLFTLDKYSEALTSFDKAITLSPNQFDLYYWRGFTLHYLKRFPEAIE 661

Query: 184 FYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQA---FQRALQLDPENVEALVALAVM 240
            Y ++++++P      +    +  +   +L   RQA     +A+QLDP++    V+    
Sbjct: 662 AYNQSIKINP----LFKFAYNVRSFSYVELKNYRQAITDLTQAIQLDPKDA---VSYNFR 714

Query: 241 DLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 300
            L   +    ++ +    +A ++ P          N  ++  +    E L E   A+ ++
Sbjct: 715 GLLYGQLEEYKQSIADSTQAIQLDP---------KNAKYYNSRGIAYEGLKEYKQAINDY 765

Query: 301 ------GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGL-GQVQL 353
                  P  +  Y +   +Y    DY++    Y  +++   K       YYG+ G    
Sbjct: 766 TQAIQLDPKNAKYYNSRGIAYSQLKDYKQVIADYTQAIQLDPKDAT----YYGMRGGAYS 821

Query: 354 KLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDA 410
           +L D++ A+ ++ + +++ P +       G  Y +L   ++A   L +  + DP++A
Sbjct: 822 ELKDYKQAIADYTQAIQLDPKDAIYYSLRGLAYSKLKDYKQAISDLTETIRRDPKNA 878


>gi|407923342|gb|EKG16415.1| Tetratricopeptide TPR-1 [Macrophomina phaseolina MS6]
          Length = 1425

 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 84/329 (25%), Positives = 134/329 (40%), Gaps = 39/329 (11%)

Query: 185 YKRALQVHPS-CPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA----- 238
           + +A++  P+  P    LGI    Y   +  +ARQ FQ+A +L P  +EA   LA     
Sbjct: 555 FLQAIKTDPNIAPAYTSLGIFYQDYARDK-KRARQCFQKAFELSPSELEAAERLARSFAD 613

Query: 239 --------VMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQL 290
                   V+  +A E+   R      ++    +P+ AM +  +    +    +  +   
Sbjct: 614 QGEWDIVEVIAERAIESGKCRPAPGSKKKKGVSWPFSAMGIVQMNRQEYSKSVYSFL--- 670

Query: 291 TETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA--GLYYMASVKE---INKPHEFIFPY 345
             +AL ++   P   HSY  L  SYH+ G Y  A     Y  S  +   I KP E  F  
Sbjct: 671 --SALRIS---PDDYHSYVGLGESYHNSGRYNSALRTFNYAESPTDGIQIKKPEENWFTK 725

Query: 346 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKI 405
           Y L  V  +LG +  A+T +++VLE  P       AL    V+ G          KAA  
Sbjct: 726 YMLANVNRELGLYDEAVTGYKEVLETRPGEFGVQIALLQTLVERGWRLIETGFFGKAAD- 784

Query: 406 DPRDAQAFIDLGELLISSDTGA-----ALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFE 460
               A A I++ + ++     A     AL    +  T ++   EE+P E +  +     E
Sbjct: 785 ---SALAAIEVAKTVVEQKPEAFNLWKALGDACSLFTWVQSRMEELPFEKVKALLEAGIE 841

Query: 461 KGEFESAHQSFKDALGDGIWLTLLDSKTK 489
             EF+   ++  D +G      LLD  T+
Sbjct: 842 VNEFDLFSET--DGVGQAQLFALLDLSTE 868


>gi|285803495|pdb|3KD7|A Chain A, Designed Tpr Module (Ctpr390) In Complex With Its
           Peptide-Ligand (Hsp90 Peptide)
 gi|285803496|pdb|3KD7|B Chain B, Designed Tpr Module (Ctpr390) In Complex With Its
           Peptide-Ligand (Hsp90 Peptide)
 gi|285803497|pdb|3KD7|C Chain C, Designed Tpr Module (Ctpr390) In Complex With Its
           Peptide-Ligand (Hsp90 Peptide)
 gi|285803498|pdb|3KD7|D Chain D, Designed Tpr Module (Ctpr390) In Complex With Its
           Peptide-Ligand (Hsp90 Peptide)
 gi|285803499|pdb|3KD7|E Chain E, Designed Tpr Module (Ctpr390) In Complex With Its
           Peptide-Ligand (Hsp90 Peptide)
          Length = 125

 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/115 (32%), Positives = 67/115 (58%), Gaps = 3/115 (2%)

Query: 303 TKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSAL 362
             + ++ NL  +Y+ +GDY+KA  YY  ++ E++  +   +  Y LG    K GD++ A+
Sbjct: 7   NSAEAWKNLGNAYYKQGDYQKAIEYYQKAL-ELDPNNASAW--YNLGNAYYKQGDYQKAI 63

Query: 363 TNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 417
             ++K LE+ P+N +     G+ Y + G  +KA E  +KA ++DP +A+A  +LG
Sbjct: 64  EYYQKALELDPNNAKAWYRRGNAYYKQGDYQKAIEDYQKALELDPNNAKAKQNLG 118



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 54/109 (49%), Gaps = 1/109 (0%)

Query: 130 TWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRAL 189
            W   G     +G+ ++A   ++  LE D +N  A        + +G Y  ++E+Y++AL
Sbjct: 11  AWKNLGNAYYKQGDYQKAIEYYQKALELDPNNASAWYNLGNAYYKQGDYQKAIEYYQKAL 70

Query: 190 QVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA 238
           ++ P+   A     G   YK G   KA + +Q+AL+LDP N +A   L 
Sbjct: 71  ELDPNNAKAWYR-RGNAYYKQGDYQKAIEDYQKALELDPNNAKAKQNLG 118



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/118 (28%), Positives = 64/118 (54%), Gaps = 6/118 (5%)

Query: 267 CAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGL 326
            A A   L N ++  G +    +  + AL +    P  + ++YNL  +Y+ +GDY+KA  
Sbjct: 8   SAEAWKNLGNAYYKQGDYQKAIEYYQKALELD---PNNASAWYNLGNAYYKQGDYQKAIE 64

Query: 327 YYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGH 384
           YY  ++ E++ P+     +Y  G    K GD++ A+ +++K LE+ P+N +  + LG+
Sbjct: 65  YYQKAL-ELD-PNN-AKAWYRRGNAYYKQGDYQKAIEDYQKALELDPNNAKAKQNLGN 119



 Score = 48.9 bits (115), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 28/106 (26%), Positives = 53/106 (50%), Gaps = 1/106 (0%)

Query: 106 KEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPAL 165
           K+  +  A +YY KA  +D +  S W   G     +G+ ++A   ++  LE D +N  A 
Sbjct: 21  KQGDYQKAIEYYQKALELDPNNASAWYNLGNAYYKQGDYQKAIEYYQKALELDPNNAKAW 80

Query: 166 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLG 211
             +    + +G Y  ++E Y++AL++ P+   A +  +G  + K G
Sbjct: 81  YRRGNAYYKQGDYQKAIEDYQKALELDPNNAKA-KQNLGNAKQKQG 125



 Score = 42.0 bits (97), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 53/105 (50%), Gaps = 7/105 (6%)

Query: 373 PDN-CETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALD 430
           P N  E  K LG+ Y + G  +KA E  +KA ++DP +A A+ +LG       D   A++
Sbjct: 5   PGNSAEAWKNLGNAYYKQGDYQKAIEYYQKALELDPNNASAWYNLGNAYYKQGDYQKAIE 64

Query: 431 AFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
            ++ A  L     +    +     G  ++++G+++ A + ++ AL
Sbjct: 65  YYQKALEL-----DPNNAKAWYRRGNAYYKQGDYQKAIEDYQKAL 104


>gi|254166562|ref|ZP_04873416.1| Tetratricopeptide repeat family [Aciduliprofundum boonei T469]
 gi|289596148|ref|YP_003482844.1| TPR repeat-containing protein [Aciduliprofundum boonei T469]
 gi|197624172|gb|EDY36733.1| Tetratricopeptide repeat family [Aciduliprofundum boonei T469]
 gi|289533935|gb|ADD08282.1| TPR repeat-containing protein [Aciduliprofundum boonei T469]
          Length = 1297

 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 138/648 (21%), Positives = 268/648 (41%), Gaps = 108/648 (16%)

Query: 5   YIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLII--AREYFKQGKVEQ---- 58
           ++P    ++E+     Q  R  S   DILK E  P D+  ++  A+ Y + GK+E     
Sbjct: 380 HLPTLKLQKEIMKKKGQWERVISICEDILKIE--PNDIGSLVDEAKAYREVGKLESALNF 437

Query: 59  -FRQILEEGSSPEIDEYYADVRYERIA---ILNALGVYYTYLGKIETKQREKEEHFIL-- 112
             R    E S+ E+ +   D+  +      I+NA     +  G  ET       ++I+  
Sbjct: 438 AIRATEIEPSNIELWKLRKDIAKDLNKPQEIINAGTQIISMEGDFETYLDLARAYYIVSR 497

Query: 113 ---ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQA 169
              A +   +  +++      W   G +    G++E A  +F+     + +N       A
Sbjct: 498 YDDAKKTLERGLKLNEDSDEGWNLLGMIYYKLGDLENARYSFEKASTINPNNKKYWKNLA 557

Query: 170 CVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGI--GLCRYKLGQLGKARQAFQRALQLD 227
            V    G+Y++++E+Y++AL++ P+    +RL    G+C  K+ +  +A ++F  AL+L+
Sbjct: 558 WVMEKLGKYNEAVEYYEKALKLDPN---DMRLWYEKGICLKKIKRYEEAIKSFDSALKLN 614

Query: 228 PENVEA-------LVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY-------------- 266
            E  +A       L+ L   D    EA  I   + K++R    Y Y              
Sbjct: 615 SEFTKALYEKGDSLIKLGNYD----EALKIFTSLIKLERGNSEYIYKRAYLRFKKREYEA 670

Query: 267 ----CAMALNYLANHFFFTGQHFLVEQL------TETALAVTNHGPTKSHSYYNLARSYH 316
                 +ALNY     F   +  + ++L       ET+  +         ++ +LA +Y 
Sbjct: 671 ALKDLNLALNYERKEKFLVLKKDVCKELKDYECVIETSKEILTINKKNISAWRDLAVAYD 730

Query: 317 SKGDYEKAGLYYMASVKEINKPHEFIFP-----YYGLGQVQLKLGDFRSALTNFEKVLEI 371
           S G  + A   Y  +++        IFP      Y L    LK   F  A+   +K+L I
Sbjct: 731 SMGKVDSAIATYRDALE--------IFPDNDVLLYELKATLLKHNRFADAIDVCKKILSI 782

Query: 372 YPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALD 430
            P++ + L+ L    ++L + E A+E L +A +++ ++A+    LG+      +  +A++
Sbjct: 783 APEDYDNLRDLSSALIKLKKYEDAKEYLLRALELN-KNAELLELLGDTYYYLKNYTSAIE 841

Query: 431 AFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKT 490
            +K A  L           + + +   +++ G+ + A +S + A+               
Sbjct: 842 HYKDALNL------NASPHIYHKLAKAYYKVGDLQEAIKSIERAI--------------E 881

Query: 491 YVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRL 550
           +  DA   +L              G+ + L    +   +N A    ++ D+  A +    
Sbjct: 882 WKKDAKFYLL--------------GSRIYLKMGDLNSAYNYANKAFELEDSDDARINLAS 927

Query: 551 ILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSM 598
           I+F+   Y D    L  + K  NNL  ++ L+ +AL+   +Y +A+ +
Sbjct: 928 IMFELGKYDDVIALLKPLGK-NNNLD-ALRLLGKALEAEERYEDAVKI 973



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 82/372 (22%), Positives = 143/372 (38%), Gaps = 89/372 (23%)

Query: 119 KASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRY 178
           KA +ID ++  +W+  G L   +GE E+A   FK  ++ D ++  +   +A V     R 
Sbjct: 236 KAIKIDPNDKKSWINLGILYKKRGEYEEALKCFKEAIKIDPNDKKSWYLEASVLHILERD 295

Query: 179 SDSLEFYKRALQVHP------------------------SCPGAIRLG---------IGL 205
           S++L+   RAL++                          +C G + +G         + L
Sbjct: 296 SEALKSINRALELDKKYESALLLRRDVAKKLKVYDELAAACVGLLDVGYEDTELMYDLAL 355

Query: 206 CRYKLGQLGKA---------------------------RQAFQRA-------LQLDPENV 231
             Y  G+L KA                           +  ++R        L+++P ++
Sbjct: 356 SYYHTGELEKAYNITLDILKSLPRHLPTLKLQKEIMKKKGQWERVISICEDILKIEPNDI 415

Query: 232 EALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLT 291
            +LV  A       E   +   +    RA EI P         +N   +  +  + + L 
Sbjct: 416 GSLVDEAK---AYREVGKLESALNFAIRATEIEP---------SNIELWKLRKDIAKDLN 463

Query: 292 ETALAVTNHGPT------KSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 345
           +    + N G           +Y +LAR+Y+    Y+ A       +K      E    +
Sbjct: 464 KPQ-EIINAGTQIISMEGDFETYLDLARAYYIVSRYDDAKKTLERGLKLNEDSDE---GW 519

Query: 346 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKI 405
             LG +  KLGD  +A  +FEK   I P+N +  K L  +  +LG+  +A E   KA K+
Sbjct: 520 NLLGMIYYKLGDLENARYSFEKASTINPNNKKYWKNLAWVMEKLGKYNEAVEYYEKALKL 579

Query: 406 DPRDAQAFIDLG 417
           DP D + + + G
Sbjct: 580 DPNDMRLWYEKG 591



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 86/441 (19%), Positives = 176/441 (39%), Gaps = 103/441 (23%)

Query: 119 KASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK-------------------------- 152
           KA +ID      W  K ++   KG++++A   +K                          
Sbjct: 120 KALQIDRRSKEVWETKAEIYQLKGDIDEALDVYKKLIKMYPDEIKYYDKYLEYRPKDLEI 179

Query: 153 ------------------------IVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRA 188
                                   + + A+       LG A    +R R  +++   K+A
Sbjct: 180 LFKKGVQLYKIQSYAECVKIMKKVVSINAEHQEAWVYLGAAYANIDRMR--EAINALKKA 237

Query: 189 LQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPEN-----VEALVALAVMDLQ 243
           +++ P+   +  + +G+   K G+  +A + F+ A+++DP +     +EA V L +++  
Sbjct: 238 IKIDPNDKKSW-INLGILYKKRGEYEEALKCFKEAIKIDPNDKKSWYLEASV-LHILERD 295

Query: 244 ANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPT 303
           +     I + +E + + +E     A+ L           +  + ++L    + + + G  
Sbjct: 296 SEALKSINRALE-LDKKYE----SALLL-----RRDVAKKLKVYDELAAACVGLLDVGYE 345

Query: 304 KSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGL-GQVQLKLGDFRSAL 362
            +   Y+LA SY+  G+ EKA    +  +K +  P     P   L  ++  K G +   +
Sbjct: 346 DTELMYDLALSYYHTGELEKAYNITLDILKSL--PRH--LPTLKLQKEIMKKKGQWERVI 401

Query: 363 TNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRD------------- 409
           +  E +L+I P++  +L      Y ++G++E A     +A +I+P +             
Sbjct: 402 SICEDILKIEPNDIGSLVDEAKAYREVGKLESALNFAIRATEIEPSNIELWKLRKDIAKD 461

Query: 410 ---AQAFIDLGELLIS--SDTGAALDA---------FKTARTLLKKAGE--EVPIEVLNN 453
               Q  I+ G  +IS   D    LD          +  A+  L++  +  E   E  N 
Sbjct: 462 LNKPQEIINAGTQIISMEGDFETYLDLARAYYIVSRYDDAKKTLERGLKLNEDSDEGWNL 521

Query: 454 IGVIHFEKGEFESAHQSFKDA 474
           +G+I+++ G+ E+A  SF+ A
Sbjct: 522 LGMIYYKLGDLENARYSFEKA 542



 Score = 44.7 bits (104), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 57/228 (25%), Positives = 98/228 (42%), Gaps = 39/228 (17%)

Query: 197 GAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANE----AAGIRK 252
            A+ +  G+   K+G +  A +A++ A +LDP NV A    A++     E    A  I K
Sbjct: 61  SALLVNTGMALQKVGAIKDALEAYKLAKKLDPSNVSAYTNYAMLLALQKEYKKAAYIIEK 120

Query: 253 GMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLA 312
            ++  +R+ E++   A              + + ++   + AL V          Y  L 
Sbjct: 121 ALQIDRRSKEVWETKA--------------EIYQLKGDIDEALDV----------YKKLI 156

Query: 313 RSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQL-KLGDFRSALTNFEKVLEI 371
           + Y  +  Y    L Y        K  E +F       VQL K+  +   +   +KV+ I
Sbjct: 157 KMYPDEIKYYDKYLEYRP------KDLEILFK----KGVQLYKIQSYAECVKIMKKVVSI 206

Query: 372 YPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGEL 419
             ++ E    LG  Y  + ++ +A   L+KA KIDP D +++I+LG L
Sbjct: 207 NAEHQEAWVYLGAAYANIDRMREAINALKKAIKIDPNDKKSWINLGIL 254


>gi|327287040|ref|XP_003228237.1| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit-like
           isoform 3 [Anolis carolinensis]
          Length = 1046

 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 86/386 (22%), Positives = 165/386 (42%), Gaps = 24/386 (6%)

Query: 93  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 152
           Y+ LG +  ++ + +E    A ++Y  A R+       ++     L+A G++E A  A+ 
Sbjct: 92  YSNLGNVYKERGQLQE----AIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 147

Query: 153 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 210
             L+ + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 148 SALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIETQPNFAVAWS-NLGCVFNAQ 204

Query: 211 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 270
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 205 GEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAAYLRALSLSPNHAVV 261

Query: 271 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 330
              LA  ++  G   L     + A+ +  H P    +Y NLA +   KG   +A   Y  
Sbjct: 262 HGNLACVYYEQGLIDLAIDTYKRAIELQPHFPD---AYCNLANALKEKGSVAEAEECYNT 318

Query: 331 SVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLG 390
           +++      + +     L  ++ + G+   A+  + K LE++P+       L  +  Q G
Sbjct: 319 ALRLCPTHADSL---NNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQG 375

Query: 391 QIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGEEVPIE 449
           ++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +          +
Sbjct: 376 KLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA-----D 430

Query: 450 VLNNIGVIHFEKGEFESAHQSFKDAL 475
             +N+  IH + G    A  S++ AL
Sbjct: 431 AHSNLASIHKDSGNIPEAIASYRTAL 456



 Score = 63.2 bits (152), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 101/478 (21%), Positives = 190/478 (39%), Gaps = 27/478 (5%)

Query: 142 GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 201
           G+ E A      +   + DN   LL  + + F   R   S  F   A++ +P    A   
Sbjct: 35  GDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYS- 93

Query: 202 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 261
            +G    + GQL +A + ++ AL+L P+ ++  + LA   + A +  G    ++    A 
Sbjct: 94  NLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEG---AVQAYVSAL 150

Query: 262 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 319
           +  P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G
Sbjct: 151 QYNPDLYCVRS--DLGNLLKALGR---LEEAKACYLKAIETQPNFAVAWSNLGCVFNAQG 205

Query: 320 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 379
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++    
Sbjct: 206 EIWLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVH 262

Query: 380 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLL 439
             L  +Y + G I+ A +  ++A ++ P    A+ +L   L   + G+  +A +   T L
Sbjct: 263 GNLACVYYEQGLIDLAIDTYKRAIELQPHFPDAYCNLANAL--KEKGSVAEAEECYNTAL 320

Query: 440 KKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASM 499
           +        + LNN+  I  E+G  E A + ++ AL       +       +   AS   
Sbjct: 321 RLCPTHA--DSLNNLANIKREQGNIEEAVRLYRKAL------EVFPEFAAAHSNLASVLQ 372

Query: 500 LQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYV 559
            Q K  +    ++     + +         N+   L+++ D   A   Y   +     + 
Sbjct: 373 QQGKLQEALMHYKEA---IRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA 429

Query: 560 DAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFR 617
           DA+  LA+I K   N+  +I     ALK+   +P+A   L        DW    E  +
Sbjct: 430 DAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMK 487


>gi|270158839|ref|ZP_06187496.1| TPR domain protein [Legionella longbeachae D-4968]
 gi|289166369|ref|YP_003456507.1| protein with TPR motifs (protein-protein interaction motif)
           [Legionella longbeachae NSW150]
 gi|269990864|gb|EEZ97118.1| TPR domain protein [Legionella longbeachae D-4968]
 gi|288859542|emb|CBJ13507.1| putative Protein with TPR motifs (protein-protein interaction
           motif) [Legionella longbeachae NSW150]
          Length = 566

 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 83/351 (23%), Positives = 147/351 (41%), Gaps = 28/351 (7%)

Query: 65  EGSSPEIDEYYADVRYERIAILNAL---GVYYTYLGKIETKQREKEEHFILATQYYNKAS 121
           EG  P+    Y  +  +    LN+L   G+ Y  LG ++            A  Y  +A 
Sbjct: 16  EGQLPQAISIYEQILTKEPGHLNSLHFLGLIYAQLGDMDN-----------AILYLLQAL 64

Query: 122 RIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDS 181
            I  ++ S              +++A   ++  ++ D +   A    A V   +  YS +
Sbjct: 65  SISPNDVSLLNNLANAYKKTHLLDKAIEYYQRAIQLDPEYAQAQNNLATVYAMQNNYSKA 124

Query: 182 LEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMD 241
           L  Y +A+   P    A    +GL   +  QL  A+  F   + L+P + E+L  L V+ 
Sbjct: 125 LFHYTKAVHAEPDFSAA-HFNLGLLLLQNNQLEAAKTQFNNVISLNPLHTESLFYLGVLH 183

Query: 242 LQANEAAGIRKGMEKM--QRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTN 299
           L+ N+        + +  Q   +I     + +  L  H     Q+ L       ALA+ N
Sbjct: 184 LEKNDLFEAENAFQNVLKQDDKQIEALSNLGVIALKRH-----QNQLAVDFFTRALALDN 238

Query: 300 HGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFR 359
                + +  NLA ++     +E A ++Y   +++     E++   Y  G  Q+ LG   
Sbjct: 239 ---DNTEARNNLAATFMHHDRFENALMHYDVLLQKDPDNLEYL---YNSGVAQMALGHLN 292

Query: 360 SALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDA 410
            A+ +FE +  +   +  TL  L  IY+++ Q EKAQE L +A +I+P+D 
Sbjct: 293 EAILHFEHITRLESKHTSTLNNLAAIYIKMDQKEKAQEYLERALEINPKDT 343



 Score = 39.3 bits (90), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 36/65 (55%)

Query: 348 LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 407
           LG +  +LGD  +A+    + L I P++   L  L + Y +   ++KA E  ++A ++DP
Sbjct: 43  LGLIYAQLGDMDNAILYLLQALSISPNDVSLLNNLANAYKKTHLLDKAIEYYQRAIQLDP 102

Query: 408 RDAQA 412
             AQA
Sbjct: 103 EYAQA 107


>gi|225851470|ref|YP_002731704.1| TPR Domain containing protein [Persephonella marina EX-H1]
 gi|225644946|gb|ACO03132.1| TPR Domain containing protein [Persephonella marina EX-H1]
          Length = 345

 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 81/308 (26%), Positives = 135/308 (43%), Gaps = 32/308 (10%)

Query: 111 ILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLE-ADRDNVPALLGQA 169
           I A +   K   +D + P ++   G + L +G  E+A    K  +E   +      LG A
Sbjct: 43  IKAKELLKKYINLDKNNPESYYYLGSIYLEEGNPEKAVKYLKKAVEKGKKAEYFNDLGYA 102

Query: 170 CVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPE 229
              F +G    +++ Y +A+++ P    A     GL   K+G   +A + + RA+ L+PE
Sbjct: 103 Y--FLKGDPEKAIKCYTKAIEIKPDLAVAY-YNRGLAFKKMGDYDEAVKNYNRAIALNPE 159

Query: 230 NVEALVALAVM-----DLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQH 284
           + +    L ++     DLQ        K +   ++A EI P      N L N ++    +
Sbjct: 160 DPDYYYNLGIVYRIKGDLQ--------KAVNCYKKAIEINPENENYYNNLGNVYYDMKDY 211

Query: 285 FLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFP 344
               +  + A+ +    P     + NL  +Y   GDYEKA   +  ++K   +  E    
Sbjct: 212 KKAVECYKKAVEIN---PLFFLGWQNLGNTYLDMGDYEKAVKAFKKALKIDKRSAEC--- 265

Query: 345 YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKAL-----GHIYVQLGQIEKAQELL 399
           Y  +G    +LG +  AL  +EK  +I PD    LKAL       +Y   G  EKA +LL
Sbjct: 266 YMDMGIALKELGRYDEALKAYEKAEQINPD----LKALSLYNKACLYASKGDKEKALKLL 321

Query: 400 RKAAKIDP 407
           +++  IDP
Sbjct: 322 KESFSIDP 329



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 59/203 (29%), Positives = 99/203 (48%), Gaps = 14/203 (6%)

Query: 278 FFFTGQHFLVEQLTETALAVTNHGPTKSHS--YYN-LARSYHSKGDYEKAGLYYMASVKE 334
           +++ G  +L E   E A+        K     Y+N L  +Y  KGD EKA   Y  ++ E
Sbjct: 63  YYYLGSIYLEEGNPEKAVKYLKKAVEKGKKAEYFNDLGYAYFLKGDPEKAIKCYTKAI-E 121

Query: 335 INKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK 394
           I KP +    YY  G    K+GD+  A+ N+ + + + P++ +    LG +Y   G ++K
Sbjct: 122 I-KP-DLAVAYYNRGLAFKKMGDYDEAVKNYNRAIALNPEDPDYYYNLGIVYRIKGDLQK 179

Query: 395 AQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLN-- 452
           A    +KA +I+P +   + +LG +         +  +K A    KKA E  P+  L   
Sbjct: 180 AVNCYKKAIEINPENENYYNNLGNVYYD------MKDYKKAVECYKKAVEINPLFFLGWQ 233

Query: 453 NIGVIHFEKGEFESAHQSFKDAL 475
           N+G  + + G++E A ++FK AL
Sbjct: 234 NLGNTYLDMGDYEKAVKAFKKAL 256



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 67/270 (24%), Positives = 122/270 (45%), Gaps = 34/270 (12%)

Query: 215 KARQAFQRALQLDPENVEALVALAVMDLQANEAAG----IRKGMEKMQRAFEIYPYCAMA 270
           KA++  ++ + LD  N E+   L  + L+          ++K +EK ++A          
Sbjct: 44  KAKELLKKYINLDKNNPESYYYLGSIYLEEGNPEKAVKYLKKAVEKGKKA--------EY 95

Query: 271 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 330
            N L   +F  G      +    A+ +    P  + +YYN   ++   GDY++A      
Sbjct: 96  FNDLGYAYFLKGDPEKAIKCYTKAIEIK---PDLAVAYYNRGLAFKKMGDYDEA------ 146

Query: 331 SVKEINK-----PHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 385
            VK  N+     P +  + YY LG V    GD + A+  ++K +EI P+N      LG++
Sbjct: 147 -VKNYNRAIALNPEDPDY-YYNLGIVYRIKGDLQKAVNCYKKAIEINPENENYYNNLGNV 204

Query: 386 YVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGE 444
           Y  +   +KA E  +KA +I+P     + +LG   +   D   A+ AFK A  + K++  
Sbjct: 205 YYDMKDYKKAVECYKKAVEINPLFFLGWQNLGNTYLDMGDYEKAVKAFKKALKIDKRSA- 263

Query: 445 EVPIEVLNNIGVIHFEKGEFESAHQSFKDA 474
               E   ++G+   E G ++ A ++++ A
Sbjct: 264 ----ECYMDMGIALKELGRYDEALKAYEKA 289


>gi|118089398|ref|XP_001232519.1| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit isoform
           1 [Gallus gallus]
          Length = 1035

 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 86/386 (22%), Positives = 164/386 (42%), Gaps = 24/386 (6%)

Query: 93  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 152
           Y+ LG +  ++ + +E    A ++Y  A R+       ++     L+A G++E A  A+ 
Sbjct: 82  YSNLGNVYKERGQLQE----AIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 137

Query: 153 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 210
             L+ + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 138 SALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIETQPNFAVAWS-NLGCVFNAQ 194

Query: 211 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 270
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 195 GEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAAYLRALSLSPNHAVV 251

Query: 271 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 330
              LA  ++  G   L       A+ +  H P    +Y NLA +   KG   +A   Y  
Sbjct: 252 HGNLACVYYEQGLIDLAIDTYRRAIELQPHFPD---AYCNLANALKEKGSVAEAEECYNT 308

Query: 331 SVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLG 390
           +++      + +     L  ++ + G+   A+  + K LE++P+       L  +  Q G
Sbjct: 309 ALRLCPTHADSL---NNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQG 365

Query: 391 QIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGEEVPIE 449
           ++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +          +
Sbjct: 366 KLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA-----D 420

Query: 450 VLNNIGVIHFEKGEFESAHQSFKDAL 475
             +N+  IH + G    A  S++ AL
Sbjct: 421 AHSNLASIHKDSGNIPEAIASYRTAL 446



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 102/478 (21%), Positives = 190/478 (39%), Gaps = 27/478 (5%)

Query: 142 GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 201
           G+ E A      +   + DN   LL  + + F   R   S  F   A++ +P    A   
Sbjct: 25  GDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYS- 83

Query: 202 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 261
            +G    + GQL +A + ++ AL+L P+ ++  + LA   + A +  G    ++    A 
Sbjct: 84  NLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEG---AVQAYVSAL 140

Query: 262 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 319
           +  P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G
Sbjct: 141 QYNPDLYCVRS--DLGNLLKALGR---LEEAKACYLKAIETQPNFAVAWSNLGCVFNAQG 195

Query: 320 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 379
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++    
Sbjct: 196 EIWLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVH 252

Query: 380 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLL 439
             L  +Y + G I+ A +  R+A ++ P    A+ +L   L   + G+  +A +   T L
Sbjct: 253 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANAL--KEKGSVAEAEECYNTAL 310

Query: 440 KKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASM 499
           +        + LNN+  I  E+G  E A + ++ AL       +       +   AS   
Sbjct: 311 RLCPTHA--DSLNNLANIKREQGNIEEAVRLYRKAL------EVFPEFAAAHSNLASVLQ 362

Query: 500 LQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYV 559
            Q K  +    ++     + +         N+   L+++ D   A   Y   +     + 
Sbjct: 363 QQGKLQEALMHYKEA---IRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA 419

Query: 560 DAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFR 617
           DA+  LA+I K   N+  +I     ALK+   +P+A   L        DW    E  +
Sbjct: 420 DAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMK 477



 Score = 43.5 bits (101), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 77/347 (22%), Positives = 140/347 (40%), Gaps = 57/347 (16%)

Query: 278 FFFTGQHFLVEQLTETA----LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK 333
              +  HF   +L  +A    LA+    P  + +Y NL   Y  +G  ++A  +Y  +++
Sbjct: 49  LLLSSIHFQCRRLDRSAHFSTLAI-KQNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALR 107

Query: 334 EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIE 393
              KP +FI  Y  L    +  GD   A+  +   L+  PD       LG++   LG++E
Sbjct: 108 L--KP-DFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLE 164

Query: 394 KAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNN 453
           +A+    KA +  P  A A+ +LG                    +    GE         
Sbjct: 165 EAKACYLKAIETQPNFAVAWSNLG-------------------CVFNAQGEIW------- 198

Query: 454 IGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVID-ASASMLQFKDMQLFHRFE 512
           + + HFEK    +   +F DA     ++ L +   +  + D A A+ L+   +       
Sbjct: 199 LAIHHFEKAV--TLDPNFLDA-----YINLGNVLKEARIFDRAVAAYLRALSLS------ 245

Query: 513 NDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKAR 572
              NH  +  N   V +    L++   DT      YR  +     + DAY  LA   K +
Sbjct: 246 --PNHAVVHGNLACVYYEQG-LIDLAIDT------YRRAIELQPHFPDAYCNLANALKEK 296

Query: 573 NNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAA 619
            ++  + E  N AL++   + ++L+ L +++ +  +  +A   +R A
Sbjct: 297 GSVAEAEECYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKA 343


>gi|428315211|ref|YP_007113093.1| Tetratricopeptide TPR_2 repeat-containing protein [Oscillatoria
           nigro-viridis PCC 7112]
 gi|428238891|gb|AFZ04677.1| Tetratricopeptide TPR_2 repeat-containing protein [Oscillatoria
           nigro-viridis PCC 7112]
          Length = 949

 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 86/343 (25%), Positives = 149/343 (43%), Gaps = 31/343 (9%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDN--VPALLGQAC 170
           A ++ NKA  +    PS +   G++L A+G+   A  AF   LE         A LGQ  
Sbjct: 22  AIEFCNKAIELQPFSPSAYTTLGEILEAQGDPTAARDAFVQALEISPQFFLAHAYLGQLY 81

Query: 171 VEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPEN 230
            ++      +++  Y++AL + P    A+   +G   +K G L  A   +++A+   P+ 
Sbjct: 82  SDY--AWLDEAVFHYRQALDLKPDW-AAVHYNLGNVFHKQGNLLGAIDCYRKAIAQKPDY 138

Query: 231 VEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQL 290
           ++AL  LAV+    +E + +   M+  ++A  + P    A + L       G   L E  
Sbjct: 139 LDALYNLAVV---LDENSQLEAAMDTYRQAIALKPDYVEAYSNL-------GVILLKEDR 188

Query: 291 TETALAVTNHG----PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYY 346
              A+ V        P  +  + NL ++   K   E+A   Y+ +++   +P + +  +Y
Sbjct: 189 AAEAIEVYQRAIEIKPDWATLHNNLGQALLDKSP-ERAIASYLTAIEL--EP-DMVLAHY 244

Query: 347 GLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKID 406
            LG+     G+  +AL  FE+ +EI  D        G   + LG+I +A     +A  + 
Sbjct: 245 NLGKAWQLQGEHSAALACFERAIEIDSDYISGYTDAGFSLMVLGKIAEAMPYFERAIALK 304

Query: 407 PRDAQAFIDLGE----LLISSD----TGAALDAFKTARTLLKK 441
           P   +A+  LG+      +  D      AA D F TA T  KK
Sbjct: 305 PDFVEAYCRLGDRRRVAAVEDDELSRAIAACDRFLTALTGRKK 347



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 59/271 (21%), Positives = 117/271 (43%), Gaps = 44/271 (16%)

Query: 168 QACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLD 227
           QA +  NRG+ ++++EF  +A+++ P  P A    +G      G    AR AF +AL++ 
Sbjct: 9   QARIYLNRGKLTEAIEFCNKAIELQPFSPSAYTT-LGEILEAQGDPTAARDAFVQALEIS 67

Query: 228 PENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLV 287
           P   +  +A A +    ++ A + + +   ++A ++ P      ++ A H          
Sbjct: 68  P---QFFLAHAYLGQLYSDYAWLDEAVFHYRQALDLKP------DWAAVH---------- 108

Query: 288 EQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYG 347
                                YNL   +H +G+   A   Y  ++ +  KP +++   Y 
Sbjct: 109 ---------------------YNLGNVFHKQGNLLGAIDCYRKAIAQ--KP-DYLDALYN 144

Query: 348 LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 407
           L  V  +     +A+  + + + + PD  E    LG I ++  +  +A E+ ++A +I P
Sbjct: 145 LAVVLDENSQLEAAMDTYRQAIALKPDYVEAYSNLGVILLKEDRAAEAIEVYQRAIEIKP 204

Query: 408 RDAQAFIDLGELLISSDTGAALDAFKTARTL 438
             A    +LG+ L+      A+ ++ TA  L
Sbjct: 205 DWATLHNNLGQALLDKSPERAIASYLTAIEL 235



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 59/249 (23%), Positives = 95/249 (38%), Gaps = 52/249 (20%)

Query: 385 IYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL-ISSDTGAALDAFKTARTLLKKAG 443
           IY+  G++ +A E   KA ++ P    A+  LGE+L    D  AA DAF  A  +     
Sbjct: 12  IYLNRGKLTEAIEFCNKAIELQPFSPSAYTTLGEILEAQGDPTAARDAFVQALEI----- 66

Query: 444 EEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFK 503
                              +F  AH        D  WL                      
Sbjct: 67  -----------------SPQFFLAHAYLGQLYSDYAWL---------------------- 87

Query: 504 DMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYL 563
           D  +FH  +     ++L  +   V +NL  +  +  + + A   YR  + +  DY+DA  
Sbjct: 88  DEAVFHYRQA----LDLKPDWAAVHYNLGNVFHKQGNLLGAIDCYRKAIAQKPDYLDALY 143

Query: 564 RLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDAT 623
            LA +    + L+ +++   +A+ +   Y  A S LG + LK D   +A E       A 
Sbjct: 144 NLAVVLDENSQLEAAMDTYRQAIALKPDYVEAYSNLGVILLKED---RAAEAIEVYQRAI 200

Query: 624 DGKDSYATL 632
           + K  +ATL
Sbjct: 201 EIKPDWATL 209


>gi|406952433|gb|EKD82044.1| hypothetical protein ACD_39C01506G0001, partial [uncultured
           bacterium]
          Length = 994

 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 83/357 (23%), Positives = 143/357 (40%), Gaps = 16/357 (4%)

Query: 119 KASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRY 178
           KAS++D      +   G +   + E + A   FK  LE   D V        +  +   +
Sbjct: 608 KASQLDPENAVIYYELGDVYYQRDEYQDALVKFKRALELQDDYVDVYQKLGTIHSSMEHW 667

Query: 179 SDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA 238
            ++ +F+++A+++        R  +G    KLG +  A  +F++AL+  P ++  +  L 
Sbjct: 668 KEAKQFFEKAIELEAENYSIYR-ELGEACEKLGDVEGAISSFEKALEFKPGDLNIIYRLG 726

Query: 239 VMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVT 298
               Q N    +   +    +A E  P  A+    L   +   GQ        E AL + 
Sbjct: 727 AQYKQNNNFNAM---VVLYSKAVEAAPKNALFYFELGEAYRGLGQQNEAASNFEQALTLN 783

Query: 299 NHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDF 358
                     Y L   +     YEK    Y    K IN+       ++ LG+   +L   
Sbjct: 784 E---NLIECIYALGGIFWENQHYEKMVRLYK---KAINRYPTNSRAHFELGKAYYRLLKI 837

Query: 359 RSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGE 418
             A+  F+KV+ +  ++ E    LG +Y+  G + +  E L KA  I P + +A   LG+
Sbjct: 838 GDAIDEFKKVINLDSNHQEVYFELGRLYIDNGMLSEGAETLEKAVAITPENGEAHFLLGK 897

Query: 419 LLIS-SDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDA 474
                +D   A  +FK A+  +     E   EVL  +G  + E+  +E A Q    A
Sbjct: 898 AYEGLNDKSKATQSFKKAQGQM-----EENYEVLLKVGADYLERESYEEALQQLTKA 949



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 82/374 (21%), Positives = 154/374 (41%), Gaps = 22/374 (5%)

Query: 106 KEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPAL 165
           K+ +  +A + +N+A +ID   P          + KG V++A   FK  L  +  N+   
Sbjct: 459 KQGNLDMAIERFNRAIQIDGSNPLPHRELAMAYINKGRVDKAIGEFKEALNYEPSNIVVN 518

Query: 166 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 225
           +  A    ++G   D+++ Y++ + + P    A    +G+     G    A   F+  + 
Sbjct: 519 IELAKAYASQGIIDDAVDSYRKVIGLDPRNSNA-HFELGIIYSTQGLNDNAISEFKTVIG 577

Query: 226 LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 285
           L P++  A + L        +   + + ++++++A ++ P  A+    L + ++   ++ 
Sbjct: 578 LSPDHKRAHLELG---RHLRDTGRVDEAIDELRKASQLDPENAVIYYELGDVYYQRDEY- 633

Query: 286 LVEQLTETALAVTNHGPTKSHSY---YNLARSYHSKGDYEKAGLYYMASVKEINKPHEFI 342
                 + AL            Y   Y    + HS  ++ K    +     E+   +  I
Sbjct: 634 ------QDALVKFKRALELQDDYVDVYQKLGTIHSSMEHWKEAKQFFEKAIELEAENYSI 687

Query: 343 FPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKA 402
             Y  LG+   KLGD   A+++FEK LE  P +   +  LG  Y Q         L  KA
Sbjct: 688 --YRELGEACEKLGDVEGAISSFEKALEFKPGDLNIIYRLGAQYKQNNNFNAMVVLYSKA 745

Query: 403 AKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEK 461
            +  P++A  + +LGE          A   F+ A TL      E  IE +  +G I +E 
Sbjct: 746 VEAAPKNALFYFELGEAYRGLGQQNEAASNFEQALTL-----NENLIECIYALGGIFWEN 800

Query: 462 GEFESAHQSFKDAL 475
             +E   + +K A+
Sbjct: 801 QHYEKMVRLYKKAI 814



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 139/640 (21%), Positives = 244/640 (38%), Gaps = 98/640 (15%)

Query: 181 SLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVM 240
           S+E YK A+++    P A  + +      + +  +A + ++ AL++DP   EAL  L   
Sbjct: 262 SVESYKSAIRIRAEAPQA-HVELAEVYLAMEKSARAIEEYKLALEIDPSLAEALANLG-- 318

Query: 241 DLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 300
           DL  N +          +R  E+ P    A   LA   +  GQ   +E+  +  L V   
Sbjct: 319 DLY-NMSEQYELAGNCYRRLVEMDPQNHSARFRLAETCYHCGQ---LEKALDEYLKVAEI 374

Query: 301 GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRS 360
              ++ +   L + Y S   +E A  YY+  V E +  +  I  +  LG+V   L     
Sbjct: 375 NEERTDALIRLGKIYASLEKWEDAAKYYV-RVFETDPQNSLI--HLELGKVYDHLNRLTD 431

Query: 361 ALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRD-------AQAF 413
           AL  FE  LE  P+N E L  +G ++ + G ++ A E   +A +ID  +       A A+
Sbjct: 432 ALREFEAALEREPNNPEILTQIGLMHRKQGNLDMAIERFNRAIQIDGSNPLPHRELAMAY 491

Query: 414 IDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKD 473
           I+ G +        A+  FK A           P  ++ NI        E   A+ S   
Sbjct: 492 INKGRV------DKAIGEFKEALNY-------EPSNIVVNI--------ELAKAYAS--- 527

Query: 474 ALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGN----------------- 516
               GI    +DS  K   +D   S   F+   ++     + N                 
Sbjct: 528 ---QGIIDDAVDSYRKVIGLDPRNSNAHFELGIIYSTQGLNDNAISEFKTVIGLSPDHKR 584

Query: 517 -HVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNL 575
            H+EL  +    L +  R+ E I +   AS L       Y +  D Y +       R+  
Sbjct: 585 AHLELGRH----LRDTGRVDEAIDELRKASQLDPENAVIYYELGDVYYQ-------RDEY 633

Query: 576 QLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLG 635
           Q ++     AL++   Y +    LG +    + W +AK+ F  A +          L   
Sbjct: 634 QDALVKFKRALELQDDYVDVYQKLGTIHSSMEHWKEAKQFFEKAIE----------LEAE 683

Query: 636 NWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSK 695
           N++ +  L   +   KL    +E A   + + +     +L      G    +   F+   
Sbjct: 684 NYSIYRELG--EACEKL--GDVEGAISSFEKALEFKPGDLNIIYRLGAQYKQNNNFNAMV 739

Query: 696 DLFTQVQEAASGSV--FVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQIL 753
            L+++  EAA  +   + ++ + +  L     A  NF  A+ + +N +   Y        
Sbjct: 740 VLYSKAVEAAPKNALFYFELGEAYRGLGQQNEAASNFEQALTLNENLIECIY-------- 791

Query: 754 LYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVA 793
             L    +E + ++   +   +AI+  P+N    F+ G A
Sbjct: 792 -ALGGIFWENQHYEKMVRLYKKAINRYPTNSRAHFELGKA 830



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 87/375 (23%), Positives = 151/375 (40%), Gaps = 53/375 (14%)

Query: 109 HFILATQYYNKASRIDM----------HEPSTWVGKGQLLLA---KGEVEQASSAFKIVL 155
           H  LA  Y NK  R+D           +EPS  V   +L  A   +G ++ A  +++ V+
Sbjct: 484 HRELAMAYINKG-RVDKAIGEFKEALNYEPSNIVVNIELAKAYASQGIIDDAVDSYRKVI 542

Query: 156 EADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGK 215
             D  N  A      +   +G   +++  +K  + + P    A  L +G      G++ +
Sbjct: 543 GLDPRNSNAHFELGIIYSTQGLNDNAISEFKTVIGLSPDHKRA-HLELGRHLRDTGRVDE 601

Query: 216 ARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYP---------- 265
           A    ++A QLDPEN      L  +  Q +E    +  + K +RA E+            
Sbjct: 602 AIDELRKASQLDPENAVIYYELGDVYYQRDE---YQDALVKFKRALELQDDYVDVYQKLG 658

Query: 266 --YCAMALNYLANHFF-----FTGQHFLV--------EQLTETALAVTNH------GPTK 304
             + +M     A  FF        +++ +        E+L +   A+++        P  
Sbjct: 659 TIHSSMEHWKEAKQFFEKAIELEAENYSIYRELGEACEKLGDVEGAISSFEKALEFKPGD 718

Query: 305 SHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTN 364
            +  Y L   Y    ++    + Y  +V+    P   +F Y+ LG+    LG    A +N
Sbjct: 719 LNIIYRLGAQYKQNNNFNAMVVLYSKAVEA--APKNALF-YFELGEAYRGLGQQNEAASN 775

Query: 365 FEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-S 423
           FE+ L +  +  E + ALG I+ +    EK   L +KA    P +++A  +LG+      
Sbjct: 776 FEQALTLNENLIECIYALGGIFWENQHYEKMVRLYKKAINRYPTNSRAHFELGKAYYRLL 835

Query: 424 DTGAALDAFKTARTL 438
             G A+D FK    L
Sbjct: 836 KIGDAIDEFKKVINL 850



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 135/660 (20%), Positives = 251/660 (38%), Gaps = 96/660 (14%)

Query: 215 KARQAFQRALQLDPENVEALVALAVMDLQAN--EAAGIRKGMEKMQRAFEIYPYCAMALN 272
           KA    ++A++LD +  EA  A+  +  + N  E A IR     + R  E+ P    A  
Sbjct: 23  KALANLRKAVELDIDYTEAHFAIGRISFEENQDETARIR-----LTRTIELAPAHDQAHY 77

Query: 273 YLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASV 332
           YL       G++        +A+A++   P  S   ++LA  Y   G++++A        
Sbjct: 78  YLGLLHHRNGRYQQAIDEFNSAIALS---PKPSRIQFDLAMLYADSGNWQEAKTILE--- 131

Query: 333 KEINKPHEFI--FPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLG 390
           K +   H+FI     Y +    L++   + A   + + +E+ P+     + L  +Y    
Sbjct: 132 KVLEHEHDFIDAIIQYAITLEHLEM--LKEAEEEYLRAIELQPEGLRAHENLARLYESTN 189

Query: 391 QIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDT-GAALDAFKTARTLLKKAGEEVPIE 449
           QI KA++  RK  +I P    A + L ++ I  D    AL+A  T   +     E    E
Sbjct: 190 QIYKAEDEFRKVVEIKPNHVAAQMSLAKIYIIRDLHDKALNALHTVVDI-----EPEIFE 244

Query: 450 VLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFH 509
               +G I+      E + +S+K A+                 I A A     +  +++ 
Sbjct: 245 AHLELGRIYHHHNALEKSVESYKSAIR----------------IRAEAPQAHVELAEVYL 288

Query: 510 RFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVD-------AY 562
             E     +E     + +  +LA  L  + D    S  Y L    Y+  V+       A 
Sbjct: 289 AMEKSARAIEEYKLALEIDPSLAEALANLGDLYNMSEQYELAGNCYRRLVEMDPQNHSAR 348

Query: 563 LRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDA 622
            RLA        L+ +++   +  ++N +  +AL  LG +    + W  A + +    + 
Sbjct: 349 FRLAETCYHCGQLEKALDEYLKVAEINEERTDALIRLGKIYASLEKWEDAAKYYVRVFE- 407

Query: 623 TDGKDSYATLSLGN-WNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGA 681
           TD ++S   L LG  +++   L +  R  +          E+ T++              
Sbjct: 408 TDPQNSLIHLELGKVYDHLNRLTDALREFEAALEREPNNPEILTQI-------------- 453

Query: 682 GVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCL 741
           G++  ++G  D++ + F +  +    +     P     LA  Y  +G    A+  ++  L
Sbjct: 454 GLMHRKQGNLDMAIERFNRAIQIDGSN-----PLPHRELAMAYINKGRVDKAIGEFKEAL 508

Query: 742 RKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSAST 801
              Y  ++  + + LA+ +       D   S  + I L P N    F+ G+         
Sbjct: 509 N--YEPSNIVVNIELAKAYASQGIIDDAVDSYRKVIGLDPRNSNAHFELGI--------- 557

Query: 802 LQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKI 861
                     + ST    +NA+  F  +   S       D K+   H+E  +HL D  ++
Sbjct: 558 ----------IYSTQGLNDNAISEFKTVIGLSP------DHKR--AHLELGRHLRDTGRV 599



 Score = 48.1 bits (113), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 101/463 (21%), Positives = 174/463 (37%), Gaps = 58/463 (12%)

Query: 341 FIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLR 400
           F   YY LG+V   + +   AL N  K +E+  D  E   A+G I  +  Q E A+  L 
Sbjct: 4   FAQGYYELGRVYQDINENEKALANLRKAVELDIDYTEAHFAIGRISFEENQDETARIRLT 63

Query: 401 KAAKIDPRDAQAFIDLGELLISSDTG---AALDAFKTARTLLKKAGEEVPIEVLNNIGVI 457
           +  ++ P   QA   LG  L+    G    A+D F +A  L  K     P  +  ++ ++
Sbjct: 64  RTIELAPAHDQAHYYLG--LLHHRNGRYQQAIDEFNSAIALSPK-----PSRIQFDLAML 116

Query: 458 HFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNH 517
           + + G ++ A    +  L        +D+  +  +      ML+  + +           
Sbjct: 117 YADSGNWQEAKTILEKVLEH--EHDFIDAIIQYAITLEHLEMLKEAEEEYLRA------- 167

Query: 518 VELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQL 577
           +EL    +    NLARL E  +    A   +R ++    ++V A + LA I   R+    
Sbjct: 168 IELQPEGLRAHENLARLYESTNQIYKAEDEFRKVVEIKPNHVAAQMSLAKIYIIRD---- 223

Query: 578 SIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNW 637
                     ++ K  NAL  + D+E          E F A  +       +  L     
Sbjct: 224 ----------LHDKALNALHTVVDIE---------PEIFEAHLELGRIYHHHNALEKSVE 264

Query: 638 NYFAALRNEKRAPK--LEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKG------ 689
           +Y +A+R    AP+  +E   +  A E   R I ++   L         LA  G      
Sbjct: 265 SYKSAIRIRAEAPQAHVELAEVYLAMEKSARAIEEYKLALEIDPSLAEALANLGDLYNMS 324

Query: 690 -QFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNT 748
            Q++++ + + ++ E        Q       LA   +  G    A+  Y          T
Sbjct: 325 EQYELAGNCYRRLVEMDP-----QNHSARFRLAETCYHCGQLEKALDEYLKVAEINEERT 379

Query: 749 DAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAG 791
           DA  L+ L + +   E+W+D  K  +R     P N  +  + G
Sbjct: 380 DA--LIRLGKIYASLEKWEDAAKYYVRVFETDPQNSLIHLELG 420



 Score = 46.6 bits (109), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 79/354 (22%), Positives = 138/354 (38%), Gaps = 25/354 (7%)

Query: 93  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 152
           Y  LG I +      EH+  A Q++ KA  ++    S +   G+     G+VE A S+F+
Sbjct: 654 YQKLGTIHSSM----EHWKEAKQFFEKAIELEAENYSIYRELGEACEKLGDVEGAISSFE 709

Query: 153 IVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQ 212
             LE    ++  +            ++  +  Y +A++  P         +G     LGQ
Sbjct: 710 KALEFKPGDLNIIYRLGAQYKQNNNFNAMVVLYSKAVEAAPKN-ALFYFELGEAYRGLGQ 768

Query: 213 LGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALN 272
             +A   F++AL L+   +E + AL  +     E     K +   ++A   YP  + A  
Sbjct: 769 QNEAASNFEQALTLNENLIECIYALGGIFW---ENQHYEKMVRLYKKAINRYPTNSRA-- 823

Query: 273 YLANHFFFTGQHFLVEQLTETA---LAVTNHGPTKSHSYYNLARSYHSKGDYEKAG--LY 327
               HF     ++ + ++ +       V N        Y+ L R Y   G   +    L 
Sbjct: 824 ----HFELGKAYYRLLKIGDAIDEFKKVINLDSNHQEVYFELGRLYIDNGMLSEGAETLE 879

Query: 328 YMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYV 387
              ++   N    F+     LG+    L D   A  +F+K      +N E L  +G  Y+
Sbjct: 880 KAVAITPENGEAHFL-----LGKAYEGLNDKSKATQSFKKAQGQMEENYEVLLKVGADYL 934

Query: 388 QLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLK 440
           +    E+A + L KAAK     +  +  LG+          A+ AF+ A  L++
Sbjct: 935 ERESYEEALQQLTKAAKFAEAGSMVYYLLGKTYRGMGKNEEAVKAFEKADELME 988



 Score = 43.1 bits (100), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 104/510 (20%), Positives = 213/510 (41%), Gaps = 67/510 (13%)

Query: 302 PTKSHSYYNLARSYHSKGDYEKAGLYYMASV-KEINKPHEFIFPYYGLGQVQLKLGDFRS 360
           P  +  YY L R Y    + EKA    +A++ K +    ++   ++ +G++  +     +
Sbjct: 2   PNFAQGYYELGRVYQDINENEKA----LANLRKAVELDIDYTEAHFAIGRISFEENQDET 57

Query: 361 ALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 420
           A     + +E+ P + +    LG ++ + G+ ++A +    A  + P+ ++   DL   +
Sbjct: 58  ARIRLTRTIELAPAHDQAHYYLGLLHHRNGRYQQAIDEFNSAIALSPKPSRIQFDLA--M 115

Query: 421 ISSDTGAALDAFKTARTLLKKAGEE----VPIEVLNNIGVIHFEKGEFESAHQSFKDALG 476
           + +D+G     ++ A+T+L+K  E     +   +   I + H E           K+A  
Sbjct: 116 LYADSG----NWQEAKTILEKVLEHEHDFIDAIIQYAITLEHLE---------MLKEAEE 162

Query: 477 DGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLAR--L 534
           +  +L  ++ + +      + + L     Q++   +     VE+  N V    +LA+  +
Sbjct: 163 E--YLRAIELQPEGLRAHENLARLYESTNQIYKAEDEFRKVVEIKPNHVAAQMSLAKIYI 220

Query: 535 LEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPN 594
           +  +HD  A + L+ ++  +  +  +A+L L  I    N L+ S+E    A+++  + P 
Sbjct: 221 IRDLHDK-ALNALHTVVDIE-PEIFEAHLELGRIYHHHNALEKSVESYKSAIRIRAEAPQ 278

Query: 595 ALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGN-WNYFAALRNEKRAPKLE 653
           A   L ++ L  +   +A E ++ A +  D   + A  +LG+ +N               
Sbjct: 279 AHVELAEVYLAMEKSARAIEEYKLALE-IDPSLAEALANLGDLYNM-------------- 323

Query: 654 ATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEK----GQFDVSKDLFTQVQEAASGSV 709
           +   E A   Y R++     N    + A   LAE     GQ + + D + +V E     +
Sbjct: 324 SEQYELAGNCYRRLVEMDPQN----HSARFRLAETCYHCGQLEKALDEYLKVAE-----I 374

Query: 710 FVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQ---ILLYLARTHYEAEQW 766
             +  D  I L  +Y +   +  A K Y   +R F   TD Q   I L L + +    + 
Sbjct: 375 NEERTDALIRLGKIYASLEKWEDAAKYY---VRVF--ETDPQNSLIHLELGKVYDHLNRL 429

Query: 767 QDCKKSLLRAIHLAPSNYTLRFDAGVAMQK 796
            D  +    A+   P+N  +    G+  +K
Sbjct: 430 TDALREFEAALEREPNNPEILTQIGLMHRK 459


>gi|326918804|ref|XP_003205676.1| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit-like,
           partial [Meleagris gallopavo]
          Length = 1038

 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 86/386 (22%), Positives = 164/386 (42%), Gaps = 24/386 (6%)

Query: 93  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 152
           Y+ LG +  ++ + +E    A ++Y  A R+       ++     L+A G++E A  A+ 
Sbjct: 85  YSNLGNVYKERGQLQE----AIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 140

Query: 153 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 210
             L+ + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 141 SALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIETQPNFAVAWS-NLGCVFNAQ 197

Query: 211 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 270
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 198 GEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAAYLRALSLSPNHAVV 254

Query: 271 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 330
              LA  ++  G   L       A+ +  H P    +Y NLA +   KG   +A   Y  
Sbjct: 255 HGNLACVYYEQGLIDLAIDTYRRAIELQPHFPD---AYCNLANALKEKGSVAEAEECYNT 311

Query: 331 SVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLG 390
           +++      + +     L  ++ + G+   A+  + K LE++P+       L  +  Q G
Sbjct: 312 ALRLCPTHADSL---NNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQG 368

Query: 391 QIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGEEVPIE 449
           ++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +          +
Sbjct: 369 KLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA-----D 423

Query: 450 VLNNIGVIHFEKGEFESAHQSFKDAL 475
             +N+  IH + G    A  S++ AL
Sbjct: 424 AHSNLASIHKDSGNIPEAIASYRTAL 449



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 102/478 (21%), Positives = 190/478 (39%), Gaps = 27/478 (5%)

Query: 142 GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 201
           G+ E A      +   + DN   LL  + + F   R   S  F   A++ +P    A   
Sbjct: 28  GDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYS- 86

Query: 202 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 261
            +G    + GQL +A + ++ AL+L P+ ++  + LA   + A +  G    ++    A 
Sbjct: 87  NLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEG---AVQAYVSAL 143

Query: 262 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 319
           +  P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G
Sbjct: 144 QYNPDLYCVRS--DLGNLLKALGR---LEEAKACYLKAIETQPNFAVAWSNLGCVFNAQG 198

Query: 320 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 379
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++    
Sbjct: 199 EIWLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVH 255

Query: 380 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLL 439
             L  +Y + G I+ A +  R+A ++ P    A+ +L   L   + G+  +A +   T L
Sbjct: 256 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANAL--KEKGSVAEAEECYNTAL 313

Query: 440 KKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASM 499
           +        + LNN+  I  E+G  E A + ++ AL       +       +   AS   
Sbjct: 314 RLCPTHA--DSLNNLANIKREQGNIEEAVRLYRKAL------EVFPEFAAAHSNLASVLQ 365

Query: 500 LQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYV 559
            Q K  +    ++     + +         N+   L+++ D   A   Y   +     + 
Sbjct: 366 QQGKLQEALMHYKEA---IRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA 422

Query: 560 DAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFR 617
           DA+  LA+I K   N+  +I     ALK+   +P+A   L        DW    E  +
Sbjct: 423 DAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMK 480



 Score = 43.5 bits (101), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 77/347 (22%), Positives = 141/347 (40%), Gaps = 57/347 (16%)

Query: 278 FFFTGQHFLVEQLTETA----LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK 333
              +  HF   +L  +A    LA+  + P  + +Y NL   Y  +G  ++A  +Y  +++
Sbjct: 52  LLLSSIHFQCRRLDRSAHFSTLAIKQN-PLLAEAYSNLGNVYKERGQLQEAIEHYRHALR 110

Query: 334 EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIE 393
              KP +FI  Y  L    +  GD   A+  +   L+  PD       LG++   LG++E
Sbjct: 111 L--KP-DFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLE 167

Query: 394 KAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNN 453
           +A+    KA +  P  A A+ +LG                    +    GE         
Sbjct: 168 EAKACYLKAIETQPNFAVAWSNLG-------------------CVFNAQGEIW------- 201

Query: 454 IGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVID-ASASMLQFKDMQLFHRFE 512
           + + HFEK    +   +F DA     ++ L +   +  + D A A+ L+   +       
Sbjct: 202 LAIHHFEKAV--TLDPNFLDA-----YINLGNVLKEARIFDRAVAAYLRALSLS------ 248

Query: 513 NDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKAR 572
              NH  +  N   V +    L++   DT      YR  +     + DAY  LA   K +
Sbjct: 249 --PNHAVVHGNLACVYYEQG-LIDLAIDT------YRRAIELQPHFPDAYCNLANALKEK 299

Query: 573 NNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAA 619
            ++  + E  N AL++   + ++L+ L +++ +  +  +A   +R A
Sbjct: 300 GSVAEAEECYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKA 346


>gi|148658023|ref|YP_001278228.1| hypothetical protein RoseRS_3925 [Roseiflexus sp. RS-1]
 gi|148570133|gb|ABQ92278.1| Tetratricopeptide TPR_2 repeat protein [Roseiflexus sp. RS-1]
          Length = 1180

 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 97/382 (25%), Positives = 153/382 (40%), Gaps = 62/382 (16%)

Query: 135  GQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS 194
            GQ+LL  G+V  A   F+  + ++  +VPA L  A +    G    +   Y+ AL    S
Sbjct: 763  GQVLLELGDVPLAERQFEAAVNSNPRHVPAHLALAQLARRAGNDRAAARRYEAALDAGAS 822

Query: 195  CPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE-----ALVALAVMDLQANEAAG 249
             P A+   IG+   +L +   A  A++RA+   P +       AL  L V  L A     
Sbjct: 823  DP-AVLEQIGMTLLELREYNAAVMAYERAIAQQPASATLRYGAALAYLGVGRLDA----- 876

Query: 250  IRKGMEKMQRAFE---IYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSH 306
                 E  +RA E   +YP    AL  L +     G+    EQ    AL      P+ + 
Sbjct: 877  ---AYESARRALERRNVYPE---ALALLGDIALQRGKLAEAEQQYRAAL---QQNPSLAA 927

Query: 307  SYYNLARSYHSKGDYEKAGLYYMASVK-EINKPHEFI----------------------- 342
            ++  L R   + G++  A  +++ +V+ E   P   +                       
Sbjct: 928  AHIGLGRVAATGGNWSIAAGHFLNAVQGEPQSPDALLWLGEARLRTADIDGAIAAYSEAL 987

Query: 343  -----FP--YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKA 395
                 FP  Y+GL Q +   G    AL N  + LE+ P   E    LG IY + G   +A
Sbjct: 988  HLRDNFPEAYFGLAQAEYGAGRIEDALRNATRALELRPRYAEAALLLGKIYERQGYSMRA 1047

Query: 396  QELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLNN 453
             E  ++A  I+PR A+       LLI +D          AR  L+ A    P   E    
Sbjct: 1048 LEAYKRAIDINPRLAEPHYRRALLLIRADR------LNEAREELEVATRLDPNFAEAHYW 1101

Query: 454  IGVIHFEKGEFESAHQSFKDAL 475
            +G ++F +   ++A   F++A+
Sbjct: 1102 LGRVYFAQRNIQAALNRFREAV 1123



 Score = 44.3 bits (103), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 76/150 (50%), Gaps = 8/150 (5%)

Query: 131  WVGKGQLLLAKGEVEQASSAFKIVLEADRDNVP-ALLGQACVEFNRGRYSDSLEFYKRAL 189
            W+G+ +L  A  +++ A +A+   L   RDN P A  G A  E+  GR  D+L    RAL
Sbjct: 965  WLGEARLRTA--DIDGAIAAYSEALHL-RDNFPEAYFGLAQAEYGAGRIEDALRNATRAL 1021

Query: 190  QVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAG 249
            ++ P    A  L +G    + G   +A +A++RA+ ++P   E     A++ ++A+    
Sbjct: 1022 ELRPRYAEAALL-LGKIYERQGYSMRALEAYKRAIDINPRLAEPHYRRALLLIRADR--- 1077

Query: 250  IRKGMEKMQRAFEIYPYCAMALNYLANHFF 279
            + +  E+++ A  + P  A A  +L   +F
Sbjct: 1078 LNEAREELEVATRLDPNFAEAHYWLGRVYF 1107



 Score = 39.7 bits (91), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 80/344 (23%), Positives = 145/344 (42%), Gaps = 67/344 (19%)

Query: 139  LAKGEVEQASSAFKIVLEADRDNV-P---ALLGQACVEFNRGRYSDSLEFYKRALQVHPS 194
            L  G ++ A  + +  LE  R NV P   ALLG   +   RG+ +++ + Y+ ALQ +PS
Sbjct: 869  LGVGRLDAAYESARRALE--RRNVYPEALALLGD--IALQRGKLAEAEQQYRAALQQNPS 924

Query: 195  CPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGM 254
               A  +G+G      G    A   F  A+Q +P++ +AL+ L    L+  +  G     
Sbjct: 925  L-AAAHIGLGRVAATGGNWSIAAGHFLNAVQGEPQSPDALLWLGEARLRTADIDG----- 978

Query: 255  EKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARS 314
                 A   Y                             AL + ++ P    +Y+ LA++
Sbjct: 979  -----AIAAY---------------------------SEALHLRDNFP---EAYFGLAQA 1003

Query: 315  YHSKGDYEKAGLYYMASVKEINKPHEFIFPYYG-----LGQVQLKLGDFRSALTNFEKVL 369
             +  G  E A       ++   +  E + P Y      LG++  + G    AL  +++ +
Sbjct: 1004 EYGAGRIEDA-------LRNATRALE-LRPRYAEAALLLGKIYERQGYSMRALEAYKRAI 1055

Query: 370  EIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISS-DTGAA 428
            +I P   E       + ++  ++ +A+E L  A ++DP  A+A   LG +  +  +  AA
Sbjct: 1056 DINPRLAEPHYRRALLLIRADRLNEAREELEVATRLDPNFAEAHYWLGRVYFAQRNIQAA 1115

Query: 429  LDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFK 472
            L+ F+ A   + + G   P E     G+   + G+  +A +SF+
Sbjct: 1116 LNRFREA---VNRQGGAYP-EARYYQGLAEEQLGDLNAAIRSFE 1155


>gi|5052534|gb|AAD38597.1|AF145622_1 BcDNA.GH04245 [Drosophila melanogaster]
          Length = 1011

 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 88/388 (22%), Positives = 166/388 (42%), Gaps = 28/388 (7%)

Query: 93  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 152
           Y+ LG +  ++ + +E    A   Y +A R+       ++     L+A  ++E A  A+ 
Sbjct: 121 YSNLGNVFKERGQLQE----ALDNYRRAVRLKPDFIDGYINLAAALVAARDMESAVQAYI 176

Query: 153 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPG-AIRLGIGLCRYK 209
             L+ + D   V + LG        GR  ++   Y +A++   +CPG A+      C + 
Sbjct: 177 TALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIE---TCPGFAVAWSNLGCVFN 231

Query: 210 L-GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCA 268
             G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A
Sbjct: 232 AQGEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAAYLRALNLSPNNA 288

Query: 269 MALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYY 328
           +    LA  ++  G   L++   +T        P    +Y NLA +   KG  ++A   Y
Sbjct: 289 VVHGNLACVYYEQG---LIDLAIDTYRRAIELQPNFPDAYCNLANALKEKGQVKEAEDCY 345

Query: 329 MASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQ 388
             +++  +   + +     L  ++ + G    A   + K LE++PD       L  +  Q
Sbjct: 346 NTALRLCSNHADSL---NNLANIKREQGYIEEATRLYLKALEVFPDFAAAHSNLASVLQQ 402

Query: 389 LGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGEEVP 447
            G++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +         
Sbjct: 403 QGKLKEALMHYKEAIRIQPTFADAYSNMGNTLKELQDVSGALQCYTRAIQINPAFA---- 458

Query: 448 IEVLNNIGVIHFEKGEFESAHQSFKDAL 475
            +  +N+  IH + G    A QS++ AL
Sbjct: 459 -DAHSNLASIHKDSGNIPEAIQSYRTAL 485



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 100/456 (21%), Positives = 184/456 (40%), Gaps = 29/456 (6%)

Query: 158 DRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKAR 217
           D  N   LL  + + F   R   S +F   A++ +P    A    +G    + GQL +A 
Sbjct: 80  DSTNTGVLLLLSSIHFQCRRLDKSAQFSTLAIKQNPVLAEAYS-NLGNVFKERGQLQEAL 138

Query: 218 QAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYP--YCAMALNYLA 275
             ++RA++L P+ ++  + LA   + A +   +   ++    A +  P  YC  +   L 
Sbjct: 139 DNYRRAVRLKPDFIDGYINLAAALVAARD---MESAVQAYITALQYNPDLYCVRS--DLG 193

Query: 276 NHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEI 335
           N     G+   +E+     L      P  + ++ NL   ++++G+   A  ++    K +
Sbjct: 194 NLLKALGR---LEEAKACYLKAIETCPGFAVAWSNLGCVFNAQGEIWLAIHHFE---KAV 247

Query: 336 NKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKA 395
                F+  Y  LG V  +   F  A+  + + L + P+N      L  +Y + G I+ A
Sbjct: 248 TLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALNLSPNNAVVHGNLACVYYEQGLIDLA 307

Query: 396 QELLRKAAKIDPRDAQAFIDLGELLI-SSDTGAALDAFKTARTLLKKAGEEVPIEVLNNI 454
            +  R+A ++ P    A+ +L   L        A D + TA  L     +      LNN+
Sbjct: 308 IDTYRRAIELQPNFPDAYCNLANALKEKGQVKEAEDCYNTALRLCSNHADS-----LNNL 362

Query: 455 GVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFEND 514
             I  E+G  E A + +  AL   ++     + +        AS+LQ +  +L     + 
Sbjct: 363 ANIKREQGYIEEATRLYLKAL--EVFPDFAAAHSNL------ASVLQ-QQGKLKEALMHY 413

Query: 515 GNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNN 574
              + +         N+   L+++ D   A   Y   +     + DA+  LA+I K   N
Sbjct: 414 KEAIRIQPTFADAYSNMGNTLKELQDVSGALQCYTRAIQINPAFADAHSNLASIHKDSGN 473

Query: 575 LQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWV 610
           +  +I+    ALK+   +P+A   L        DW 
Sbjct: 474 IPEAIQSYRTALKLKPDFPDAYCNLAHCLQIVCDWT 509



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 73/338 (21%), Positives = 134/338 (39%), Gaps = 48/338 (14%)

Query: 83  IAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKG 142
           I       V ++ LG +   Q E      LA  ++ KA  +D +    ++  G +L    
Sbjct: 213 IETCPGFAVAWSNLGCVFNAQGE----IWLAIHHFEKAVTLDPNFLDAYINLGNVLKEAR 268

Query: 143 EVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLG 202
             ++A +A+   L    +N       ACV + +G    +++ Y+RA+++ P+ P A    
Sbjct: 269 IFDRAVAAYLRALNLSPNNAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPNFPDAY-CN 327

Query: 203 IGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFE 262
           +     + GQ+ +A   +  AL+L   + ++L  LA +     E   I +      +A E
Sbjct: 328 LANALKEKGQVKEAEDCYNTALRLCSNHADSLNNLANIK---REQGYIEEATRLYLKALE 384

Query: 263 IYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYE 322
           ++P  A A                                   HS  NLA     +G  +
Sbjct: 385 VFPDFAAA-----------------------------------HS--NLASVLQQQGKLK 407

Query: 323 KAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKAL 382
           +A ++Y  +++   +P  F   Y  +G    +L D   AL  + + ++I P   +    L
Sbjct: 408 EALMHYKEAIRI--QP-TFADAYSNMGNTLKELQDVSGALQCYTRAIQINPAFADAHSNL 464

Query: 383 GHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 420
             I+   G I +A +  R A K+ P    A+ +L   L
Sbjct: 465 ASIHKDSGNIPEAIQSYRTALKLKPDFPDAYCNLAHCL 502


>gi|386393454|ref|ZP_10078235.1| tetratricopeptide repeat protein [Desulfovibrio sp. U5L]
 gi|385734332|gb|EIG54530.1| tetratricopeptide repeat protein [Desulfovibrio sp. U5L]
          Length = 209

 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/173 (28%), Positives = 86/173 (49%), Gaps = 13/173 (7%)

Query: 300 HGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFR 359
           H P    ++YNL  +Y +KG   +A   ++ +V+      E    Y  LG + +  G+  
Sbjct: 21  HNPGCGVTHYNLGTAYVAKGRLVEAEAEFLQAVECSPSLAEG---YVQLGGLAMNKGNLD 77

Query: 360 SALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGE- 418
           + L   EK     P        +G +++Q G+++KA++ LR+A KIDP+  QA   LG  
Sbjct: 78  ACLEWNEKACRARPLFAVPYGNIGFVHLQRGEVDKAEKALRRAVKIDPKYVQALATLGSA 137

Query: 419 LLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQ 469
           L +  D  AA   F++A+ L     E  P     +NN+ ++  E+G+F+ A +
Sbjct: 138 LFMKGDIDAA--EFQSAKAL-----EIEPNFGPAINNLALVAMERGDFQKAKE 183



 Score = 45.1 bits (105), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 41/154 (26%), Positives = 68/154 (44%), Gaps = 9/154 (5%)

Query: 126 HEPSTWVGK---GQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSL 182
           H P   V     G   +AKG + +A + F   +E         +    +  N+G     L
Sbjct: 21  HNPGCGVTHYNLGTAYVAKGRLVEAEAEFLQAVECSPSLAEGYVQLGGLAMNKGNLDACL 80

Query: 183 EFYKRALQVHPSCPGAIRLG-IGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMD 241
           E+ ++A +  P    A+  G IG    + G++ KA +A +RA+++DP+ V+AL  L    
Sbjct: 81  EWNEKACRARPLF--AVPYGNIGFVHLQRGEVDKAEKALRRAVKIDPKYVQALATLGSAL 138

Query: 242 LQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLA 275
               +   I     +  +A EI P    A+N LA
Sbjct: 139 FMKGD---IDAAEFQSAKALEIEPNFGPAINNLA 169


>gi|327287038|ref|XP_003228236.1| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit-like
           isoform 2 [Anolis carolinensis]
          Length = 1036

 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 86/386 (22%), Positives = 165/386 (42%), Gaps = 24/386 (6%)

Query: 93  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 152
           Y+ LG +  ++ + +E    A ++Y  A R+       ++     L+A G++E A  A+ 
Sbjct: 82  YSNLGNVYKERGQLQE----AIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 137

Query: 153 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 210
             L+ + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 138 SALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIETQPNFAVAWS-NLGCVFNAQ 194

Query: 211 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 270
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 195 GEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAAYLRALSLSPNHAVV 251

Query: 271 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 330
              LA  ++  G   L     + A+ +  H P    +Y NLA +   KG   +A   Y  
Sbjct: 252 HGNLACVYYEQGLIDLAIDTYKRAIELQPHFPD---AYCNLANALKEKGSVAEAEECYNT 308

Query: 331 SVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLG 390
           +++      + +     L  ++ + G+   A+  + K LE++P+       L  +  Q G
Sbjct: 309 ALRLCPTHADSL---NNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQG 365

Query: 391 QIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGEEVPIE 449
           ++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +          +
Sbjct: 366 KLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQI-----NPAFAD 420

Query: 450 VLNNIGVIHFEKGEFESAHQSFKDAL 475
             +N+  IH + G    A  S++ AL
Sbjct: 421 AHSNLASIHKDSGNIPEAIASYRTAL 446



 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 101/478 (21%), Positives = 190/478 (39%), Gaps = 27/478 (5%)

Query: 142 GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 201
           G+ E A      +   + DN   LL  + + F   R   S  F   A++ +P    A   
Sbjct: 25  GDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYS- 83

Query: 202 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 261
            +G    + GQL +A + ++ AL+L P+ ++  + LA   + A +  G    ++    A 
Sbjct: 84  NLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEG---AVQAYVSAL 140

Query: 262 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 319
           +  P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G
Sbjct: 141 QYNPDLYCVRS--DLGNLLKALGR---LEEAKACYLKAIETQPNFAVAWSNLGCVFNAQG 195

Query: 320 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 379
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++    
Sbjct: 196 EIWLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVH 252

Query: 380 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLL 439
             L  +Y + G I+ A +  ++A ++ P    A+ +L   L   + G+  +A +   T L
Sbjct: 253 GNLACVYYEQGLIDLAIDTYKRAIELQPHFPDAYCNLANAL--KEKGSVAEAEECYNTAL 310

Query: 440 KKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASM 499
           +        + LNN+  I  E+G  E A + ++ AL       +       +   AS   
Sbjct: 311 RLCPTHA--DSLNNLANIKREQGNIEEAVRLYRKAL------EVFPEFAAAHSNLASVLQ 362

Query: 500 LQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYV 559
            Q K  +    ++     + +         N+   L+++ D   A   Y   +     + 
Sbjct: 363 QQGKLQEALMHYKEA---IRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA 419

Query: 560 DAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFR 617
           DA+  LA+I K   N+  +I     ALK+   +P+A   L        DW    E  +
Sbjct: 420 DAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMK 477


>gi|330509108|ref|YP_004385536.1| TPR-repeat-containing protein [Methanosaeta concilii GP6]
 gi|328929916|gb|AEB69718.1| TPR-repeat protein [Methanosaeta concilii GP6]
          Length = 355

 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 77/314 (24%), Positives = 130/314 (41%), Gaps = 38/314 (12%)

Query: 126 HEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGR-------- 177
           + P  W+ +G  L +    E+A+ AF   LE D  N+ A L ++    + G         
Sbjct: 36  NTPVAWIKRGIELSSNESYEEATQAFDRALEQDPQNLNAWLFKSMALTSLGTKIALENKN 95

Query: 178 -------------YSDSLEFYKRALQVHPSCPG-----AIRLG-IGLCRYKLGQLGKARQ 218
                        +  ++E ++RA+++ P         A  L  IG     L  L ++ Q
Sbjct: 96  LGIKDREASGMTAFDKAIEAHERAIEIAPENATVWTYKANNLAKIGSFTDNLSILNESLQ 155

Query: 219 AFQRALQLDPENVEAL----VALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYL 274
           AF +AL+L+PE+ +A     +AL  +     + +   + +  + RA EI P  A AL   
Sbjct: 156 AFDKALELNPEDADAWHGKGIALVYISQTREDTSRYEEALRYIDRALEIDPQTAGALENK 215

Query: 275 ANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKE 334
           A      G+    ++L   AL + N       S  +L  ++ SKG   +A   Y  +VK 
Sbjct: 216 AGILSELGRQNESDKLYSEALELYNTSIETEKSTEDLVEAWLSKGFILQAQGKYEDAVKA 275

Query: 335 INKPHEFIFPYYGLGQ------VQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQ 388
           +    +   P  GL        +  +L ++  A+  F+K L+I P +  T    G     
Sbjct: 276 LGNATD-ADPMNGLAWKVKGVLLWRELKEYDDAVNAFDKALQINPKDPLTWMNKGDALKA 334

Query: 389 LGQIEKAQELLRKA 402
           LG+  +A E   KA
Sbjct: 335 LGRQAEADEAYAKA 348


>gi|189183138|ref|YP_001936923.1| TPR repeat-containing protein 03 [Orientia tsutsugamushi str.
           Ikeda]
 gi|189179909|dbj|BAG39689.1| TPR repeat-containing protein 03 [Orientia tsutsugamushi str.
           Ikeda]
          Length = 502

 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 75/313 (23%), Positives = 140/313 (44%), Gaps = 30/313 (9%)

Query: 118 NKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGR 177
           N A + + + P  +  KG  L   G+  +A   F + ++ +  N      +       G+
Sbjct: 168 NLAIKYEPYNPDAYHSKGMCLDKLGQYHEAIENFDLAIKYEPYNPDTYNNKGVCVDKLGQ 227

Query: 178 YSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVAL 237
           + ++++ +  A++  P+C  A  L  G+C Y+L Q  +A + F  A++     V A +  
Sbjct: 228 HQEAIKIFNLAIKYKPNCEEAY-LNKGMCLYQLEQYKEAIENFDLAIKYKSNYVGAYL-- 284

Query: 238 AVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNY-LANHFFFTGQHFLVEQLTETALA 296
                  N+ A + K +E+ Q A E +    +A+ Y L N   +  +   + +L +   A
Sbjct: 285 -------NKGACLSK-LEQHQEAIENFD---LAIKYELCNPDTYYNKGACLYELRQYQEA 333

Query: 297 VTNHGPTKSHSYYNLARSYHSKGDYEKAGLY----YMASVKEIN-----KPHEFIFPYYG 347
           V N      ++  N  ++Y SKG    A LY    Y  +++  N      P++    YY 
Sbjct: 334 VENFDLAIKYNP-NFEKAYLSKG----ACLYELRQYQEAIECCNLAIKYNPND-AEAYYN 387

Query: 348 LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 407
            G    KLG  ++A+ N++  ++  P+  +     G    +LGQ ++A E    A K +P
Sbjct: 388 KGVCLFKLGQHQAAVENYDLAIKYNPNYVDAYYNKGLCLSKLGQAQEAVENFNLAIKYNP 447

Query: 408 RDAQAFIDLGELL 420
            DA+A+ + G  L
Sbjct: 448 NDAEAYYNKGLCL 460



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 70/307 (22%), Positives = 133/307 (43%), Gaps = 40/307 (13%)

Query: 130 TWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRAL 189
            ++ KG  L   G++++A   F + ++ + +   A L +    +  G+Y +++E    A+
Sbjct: 112 AYLSKGVSLGKLGQLQKAIENFDLAIKHNINYETAYLNKGICLYKLGQYHEAIECCNLAI 171

Query: 190 QVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAG 249
           +  P  P A     G+C  KLGQ  +A + F  A++ +P N          D   N+   
Sbjct: 172 KYEPYNPDAYH-SKGMCLDKLGQYHEAIENFDLAIKYEPYNP---------DTYNNKGVC 221

Query: 250 IRKGMEKMQRAFEIYPYCAMALNYLAN-HFFFTGQHFLVEQLTETALAVTNHGPTKSHSY 308
           + K + + Q A +I+    +A+ Y  N    +  +   + QL +   A+ N         
Sbjct: 222 VDK-LGQHQEAIKIF---NLAIKYKPNCEEAYLNKGMCLYQLEQYKEAIEN--------- 268

Query: 309 YNLARSYHSKGDYEKAGLYYMASVKEINK------------PHEFIFP--YYGLGQVQLK 354
           ++LA  Y  K +Y  A L   A + ++ +             +E   P  YY  G    +
Sbjct: 269 FDLAIKY--KSNYVGAYLNKGACLSKLEQHQEAIENFDLAIKYELCNPDTYYNKGACLYE 326

Query: 355 LGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFI 414
           L  ++ A+ NF+  ++  P+  +   + G    +L Q ++A E    A K +P DA+A+ 
Sbjct: 327 LRQYQEAVENFDLAIKYNPNFEKAYLSKGACLYELRQYQEAIECCNLAIKYNPNDAEAYY 386

Query: 415 DLGELLI 421
           + G  L 
Sbjct: 387 NKGVCLF 393



 Score = 43.1 bits (100), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 54/256 (21%), Positives = 100/256 (39%), Gaps = 66/256 (25%)

Query: 176 GRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV 235
            +Y +++E +  A++ +P+C  A     G+C  KLGQL KA + F   ++      EA +
Sbjct: 56  NKYQEAIENFDLAIKYNPNCAEAY-YNKGICLDKLGQLQKAIENFDLTIKYKSNCEEAYL 114

Query: 236 ALAVMDLQANEAAGIRKG-MEKMQRAFEIYPYCAMALNYLANH----------FFFTGQH 284
           +            G+  G + ++Q+A E +    +A+ +  N+           +  GQ+
Sbjct: 115 S-----------KGVSLGKLGQLQKAIENFD---LAIKHNINYETAYLNKGICLYKLGQY 160

Query: 285 FLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFP 344
               +    A+    + P           +YHSKG                         
Sbjct: 161 HEAIECCNLAIKYEPYNPD----------AYHSKG------------------------- 185

Query: 345 YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAK 404
                    KLG +  A+ NF+  ++  P N +T    G    +LGQ ++A ++   A K
Sbjct: 186 -----MCLDKLGQYHEAIENFDLAIKYEPYNPDTYNNKGVCVDKLGQHQEAIKIFNLAIK 240

Query: 405 IDPRDAQAFIDLGELL 420
             P   +A+++ G  L
Sbjct: 241 YKPNCEEAYLNKGMCL 256


>gi|398824468|ref|ZP_10582798.1| Flp pilus assembly protein TadD [Bradyrhizobium sp. YR681]
 gi|398224875|gb|EJN11167.1| Flp pilus assembly protein TadD [Bradyrhizobium sp. YR681]
          Length = 661

 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 80/343 (23%), Positives = 148/343 (43%), Gaps = 32/343 (9%)

Query: 142 GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 201
           G + QA + ++ +L ++ D+  ++       F  G+   +L+F  RA+++ P C G    
Sbjct: 22  GRLPQAEAIYRQILASEPDHADSIHLLGVASFQAGQPDKALDFIIRAIKLRP-CTGVYYS 80

Query: 202 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 261
            +      LG+  +A  +++ AL   P+N++A   L ++  ++ +AA    G E   R  
Sbjct: 81  NMAAVLRALGRRDEAVASYREALLHQPDNLDAHNQLGILLGESGDAA----GEEAHYR-- 134

Query: 262 EIYPYCAMALNYLANHF---FFTGQHFLVEQLTETALA----VTNHGPTKSHSYYNLARS 314
                  +AL Y  +H    F      +  +  + A+     V    P  + ++ NL   
Sbjct: 135 -------LALRYDPDHVDARFNLANLLVRRKHLDDAIGDFRQVLRRKPDFAAAHSNLGAV 187

Query: 315 YHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPD 374
                 +E+    Y  +V+ +N    F   Y  LG +  KLG F  A     +  ++   
Sbjct: 188 LFDLSAFEECERCYREAVR-LNP--AFAEAYNNLGILLTKLGRFDEAEAGLREACKLKSC 244

Query: 375 NCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKT 434
             E L  LG +    G+ E+++   R+A ++ P    A ++LG  L  S        F  
Sbjct: 245 FPEALNNLGDLLRIRGRPEESEVCCREALRLKPDYVSAQLNLGNALRESGR------FHE 298

Query: 435 ARTLLKKAGEEVPI--EVLNNIGVIHFEKGEFESAHQSFKDAL 475
           A    ++A +  P   E L+N+G + F+ G  + A QSF+ A+
Sbjct: 299 AEACYREALDRNPAWPEALSNLGSLLFDLGRPDEAIQSFRTAV 341



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 81/382 (21%), Positives = 156/382 (40%), Gaps = 44/382 (11%)

Query: 196 PGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGME 255
           PG      GL  ++ G+L +A   +++ L  +P++ +++  L V   QA +     K ++
Sbjct: 7   PGFASFEAGLAHHRAGRLPQAEAIYRQILASEPDHADSIHLLGVASFQAGQPD---KALD 63

Query: 256 KMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSY 315
            + RA ++ P   +  + +A      G+    ++   +      H P    ++  L    
Sbjct: 64  FIIRAIKLRPCTGVYYSNMAAVLRALGRR---DEAVASYREALLHQPDNLDAHNQLGILL 120

Query: 316 HSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDN 375
              GD      +Y  +++  +  H  +   + L  + ++      A+ +F +VL   PD 
Sbjct: 121 GESGDAAGEEAHYRLALR-YDPDH--VDARFNLANLLVRRKHLDDAIGDFRQVLRRKPDF 177

Query: 376 CETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTA 435
                 LG +   L   E+ +   R+A +++P  A+A+ +LG LL        L  F  A
Sbjct: 178 AAAHSNLGAVLFDLSAFEECERCYREAVRLNPAFAEAYNNLGILLTK------LGRFDEA 231

Query: 436 RTLLKKAG--EEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVI 493
              L++A   +    E LNN+G +   +G  E +    ++AL           + K   +
Sbjct: 232 EAGLREACKLKSCFPEALNNLGDLLRIRGRPEESEVCCREAL-----------RLKPDYV 280

Query: 494 DASASM-------LQFKDMQLFHRFENDGNHV--ELPWNKVTVLFNLARLLEQIHDTVAA 544
            A  ++        +F + +  +R   D N    E   N  ++LF+L R  E I      
Sbjct: 281 SAQLNLGNALRESGRFHEAEACYREALDRNPAWPEALSNLGSLLFDLGRPDEAIQS---- 336

Query: 545 SVLYRLILFKYQDYVDAYLRLA 566
              +R  + +  DY DA+  LA
Sbjct: 337 ---FRTAVSQKPDYPDAHSNLA 355



 Score = 41.2 bits (95), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 40/160 (25%), Positives = 68/160 (42%), Gaps = 12/160 (7%)

Query: 87  NALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQ 146
           N LG+  T LG+ +  +    E   L + +           P      G LL  +G  E+
Sbjct: 216 NNLGILLTKLGRFDEAEAGLREACKLKSCF-----------PEALNNLGDLLRIRGRPEE 264

Query: 147 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 206
           +    +  L    D V A L         GR+ ++   Y+ AL  +P+ P A+   +G  
Sbjct: 265 SEVCCREALRLKPDYVSAQLNLGNALRESGRFHEAEACYREALDRNPAWPEALS-NLGSL 323

Query: 207 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANE 246
            + LG+  +A Q+F+ A+   P+  +A   LA+  L A +
Sbjct: 324 LFDLGRPDEAIQSFRTAVSQKPDYPDAHSNLAITLLLAGQ 363


>gi|158521101|ref|YP_001528971.1| hypothetical protein Dole_1087 [Desulfococcus oleovorans Hxd3]
 gi|158509927|gb|ABW66894.1| Tetratricopeptide TPR_2 repeat protein [Desulfococcus oleovorans
           Hxd3]
          Length = 808

 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 58/211 (27%), Positives = 94/211 (44%), Gaps = 13/211 (6%)

Query: 203 IGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFE 262
           +G    K GQ  +A  AFQRA+ LDP   +A   L  +   A  A   +   EK      
Sbjct: 80  LGQVLLKKGQTDEAAAAFQRAVSLDPGLAQAHFNLGKISKAAGRADEAKTFFEKT---LN 136

Query: 263 IYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYE 322
           + P+   A N L N     G +       E  L +    P ++ ++YN+   +  + + E
Sbjct: 137 LAPHHLAARNNLGNLLQQAGDNDGALACFEAVLKIN---PRQAEAHYNIGNIHKLREEVE 193

Query: 323 KAGLYYMASVKEINKPHEFIFPYYGLGQVQL--KLGDFRSALTNFEKVLEIYPDNCETLK 380
            A  YY  ++   N    F+ PY GL ++ L  +  D   +L    K L + P N E L 
Sbjct: 194 PAARYYEQAIA-CNP--GFVPPYIGLARIHLANRRNDLAESL--IRKALRMDPKNGEALS 248

Query: 381 ALGHIYVQLGQIEKAQELLRKAAKIDPRDAQ 411
            L ++Y++ G+IE+A  +   A ++ P  A+
Sbjct: 249 ELANLYLREGRIEEAVPVFLAAIRVSPEKAE 279



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 69/282 (24%), Positives = 121/282 (42%), Gaps = 28/282 (9%)

Query: 135 GQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS 194
           GQ+LL KG+ ++A++AF+  +  D     A      +    GR  ++  F+++ L + P 
Sbjct: 81  GQVLLKKGQTDEAAAAFQRAVSLDPGLAQAHFNLGKISKAAGRADEAKTFFEKTLNLAPH 140

Query: 195 CPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGM 254
              A R  +G    + G    A   F+  L+++P   EA   +  +         +R+ +
Sbjct: 141 HLAA-RNNLGNLLQQAGDNDGALACFEAVLKINPRQAEAHYNIGNIH-------KLREEV 192

Query: 255 EKMQRAFE---------IYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKS 305
           E   R +E         + PY  +A  +LAN      ++ L E L   AL +    P   
Sbjct: 193 EPAARYYEQAIACNPGFVPPYIGLARIHLANR-----RNDLAESLIRKALRMD---PKNG 244

Query: 306 HSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNF 365
            +   LA  Y  +G  E+A   ++A+++   +  E    +  L       G    A+ +F
Sbjct: 245 EALSELANLYLREGRIEEAVPVFLAAIRVSPEKAEL---HGALATAYSIRGATSQAMASF 301

Query: 366 EKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 407
           EK LE+ PD+  T  + G++    G  E A E  R+   +DP
Sbjct: 302 EKALELDPDSARTRFSYGNLLESSGNREGALEAYRRVMALDP 343



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 76/318 (23%), Positives = 127/318 (39%), Gaps = 54/318 (16%)

Query: 304 KSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALT 363
           KS + +N A + H  G  E A   Y   ++E N  H      + LG +     D  +A  
Sbjct: 5   KSLTLFNKAVALHRAGSLEGAETLYRDLLRE-NPNHADAL--HLLGTIMAAKKDLVAAEG 61

Query: 364 NFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISS 423
              K +E  P       +LG + ++ GQ ++A    ++A  +DP  AQA  +LG+  IS 
Sbjct: 62  TLRKAVEKAPKQAAFHNSLGQVLLKKGQTDEAAAAFQRAVSLDPGLAQAHFNLGK--ISK 119

Query: 424 DTGAALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWL 481
             G A      A+T  +K     P  +   NN+G +  + G+ + A   F+         
Sbjct: 120 AAGRA----DEAKTFFEKTLNLAPHHLAARNNLGNLLQQAGDNDGALACFE--------- 166

Query: 482 TLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDT 541
                           ++L+    Q            E  +N    + N+ +L E++   
Sbjct: 167 ----------------AVLKINPRQ-----------AEAHYN----IGNIHKLREEVE-- 193

Query: 542 VAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGD 601
             A+  Y   +     +V  Y+ LA I  A     L+  L+ +AL+++ K   ALS L +
Sbjct: 194 -PAARYYEQAIACNPGFVPPYIGLARIHLANRRNDLAESLIRKALRMDPKNGEALSELAN 252

Query: 602 LELKNDDWVKAKETFRAA 619
           L L+     +A   F AA
Sbjct: 253 LYLREGRIEEAVPVFLAA 270



 Score = 46.2 bits (108), Expect = 0.082,   Method: Compositional matrix adjust.
 Identities = 82/362 (22%), Positives = 144/362 (39%), Gaps = 44/362 (12%)

Query: 208 YKLGQLGKARQAFQRALQLDPENVEALVALAVM-----DLQANEAAGIRKGMEKMQRAFE 262
           ++ G L  A   ++  L+ +P + +AL  L  +     DL A E   +RK +EK      
Sbjct: 17  HRAGSLEGAETLYRDLLRENPNHADALHLLGTIMAAKKDLVAAEGT-LRKAVEKA----- 70

Query: 263 IYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG----PTKSHSYYNLARSYHSK 318
             P  A   N L       GQ  L +  T+ A A         P  + +++NL +   + 
Sbjct: 71  --PKQAAFHNSL-------GQVLLKKGQTDEAAAAFQRAVSLDPGLAQAHFNLGKISKAA 121

Query: 319 GDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCET 378
           G  ++A  ++    K +N     +     LG +  + GD   AL  FE VL+I P   E 
Sbjct: 122 GRADEAKTFFE---KTLNLAPHHLAARNNLGNLLQQAGDNDGALACFEAVLKINPRQAEA 178

Query: 379 LKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTL 438
              +G+I+    ++E A     +A   +P     +I L  + +++           A +L
Sbjct: 179 HYNIGNIHKLREEVEPAARYYEQAIACNPGFVPPYIGLARIHLANRRN------DLAESL 232

Query: 439 LKKAGEEVPI--EVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDAS 496
           ++KA    P   E L+ +  ++  +G  E A   F  A      + +   K + +   A+
Sbjct: 233 IRKALRMDPKNGEALSELANLYLREGRIEEAVPVFLAA------IRVSPEKAELHGALAT 286

Query: 497 ASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQ 556
           A  ++    Q    FE     +EL  +     F+   LLE   +   A   YR ++    
Sbjct: 287 AYSIRGATSQAMASFEKA---LELDPDSARTRFSYGNLLESSGNREGALEAYRRVMALDP 343

Query: 557 DY 558
           D+
Sbjct: 344 DF 345


>gi|75909502|ref|YP_323798.1| hypothetical protein Ava_3295 [Anabaena variabilis ATCC 29413]
 gi|75703227|gb|ABA22903.1| TPR repeat protein [Anabaena variabilis ATCC 29413]
          Length = 311

 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 71/295 (24%), Positives = 110/295 (37%), Gaps = 47/295 (15%)

Query: 152 KIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLG 211
           K++ +      P LL Q       GR  D++  ++ A+Q+ P+   A    +GL   + G
Sbjct: 35  KLLAQYSLPTAPTLLNQGLQAIQAGRIQDAIAAFQSAIQLDPNL-AAAHYNLGLALRQTG 93

Query: 212 QLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMAL 271
           QL  A  AF RA Q DP    A   L    L+ N    +++  + +QRA E+ P    A 
Sbjct: 94  QLQPAADAFYRATQSDPNFALAFANLGGSLLEGNN---LQQANDYLQRALELEPRLGFA- 149

Query: 272 NYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMAS 331
                                               +YNL      + ++E A   +  +
Sbjct: 150 ------------------------------------HYNLGLVRQQQQNWEGAIASFQKA 173

Query: 332 VK-EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLG 390
           V+   N P     P+Y LG   L+LG    A   F + ++I P   E    LG I    G
Sbjct: 174 VELSKNAPE----PHYYLGLCYLQLGKLDEAKNAFNQAIKINPRYSEAHYNLGVILFNQG 229

Query: 391 QIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGE 444
             ++A    R +A+ +P    A+   G +    +    A   F  AR L    G 
Sbjct: 230 NSQEALIAFRNSAEANPNYPNAYYGAGLVFTQLNQYSEAAKVFNHARNLYNTQGN 284



 Score = 40.4 bits (93), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 31/125 (24%), Positives = 59/125 (47%), Gaps = 8/125 (6%)

Query: 353 LKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQA 412
           ++ G  + A+  F+  +++ P+       LG    Q GQ++ A +   +A + DP  A A
Sbjct: 56  IQAGRIQDAIAAFQSAIQLDPNLAAAHYNLGLALRQTGQLQPAADAFYRATQSDPNFALA 115

Query: 413 FIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLN--NIGVIHFEKGEFESAHQS 470
           F +LG  L+  +        + A   L++A E  P       N+G++  ++  +E A  S
Sbjct: 116 FANLGGSLLEGNN------LQQANDYLQRALELEPRLGFAHYNLGLVRQQQQNWEGAIAS 169

Query: 471 FKDAL 475
           F+ A+
Sbjct: 170 FQKAV 174


>gi|327287036|ref|XP_003228235.1| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit-like
           isoform 1 [Anolis carolinensis]
          Length = 1066

 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 86/386 (22%), Positives = 165/386 (42%), Gaps = 24/386 (6%)

Query: 93  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 152
           Y+ LG +  ++ + +E    A ++Y  A R+       ++     L+A G++E A  A+ 
Sbjct: 92  YSNLGNVYKERGQLQE----AIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 147

Query: 153 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 210
             L+ + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 148 SALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIETQPNFAVAWS-NLGCVFNAQ 204

Query: 211 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 270
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 205 GEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAAYLRALSLSPNHAVV 261

Query: 271 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 330
              LA  ++  G   L     + A+ +  H P    +Y NLA +   KG   +A   Y  
Sbjct: 262 HGNLACVYYEQGLIDLAIDTYKRAIELQPHFPD---AYCNLANALKEKGSVAEAEECYNT 318

Query: 331 SVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLG 390
           +++      + +     L  ++ + G+   A+  + K LE++P+       L  +  Q G
Sbjct: 319 ALRLCPTHADSL---NNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQG 375

Query: 391 QIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGEEVPIE 449
           ++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +          +
Sbjct: 376 KLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA-----D 430

Query: 450 VLNNIGVIHFEKGEFESAHQSFKDAL 475
             +N+  IH + G    A  S++ AL
Sbjct: 431 AHSNLASIHKDSGNIPEAIASYRTAL 456



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 101/478 (21%), Positives = 190/478 (39%), Gaps = 27/478 (5%)

Query: 142 GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 201
           G+ E A      +   + DN   LL  + + F   R   S  F   A++ +P    A   
Sbjct: 35  GDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYS- 93

Query: 202 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 261
            +G    + GQL +A + ++ AL+L P+ ++  + LA   + A +  G    ++    A 
Sbjct: 94  NLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEG---AVQAYVSAL 150

Query: 262 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 319
           +  P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G
Sbjct: 151 QYNPDLYCVRS--DLGNLLKALGR---LEEAKACYLKAIETQPNFAVAWSNLGCVFNAQG 205

Query: 320 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 379
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++    
Sbjct: 206 EIWLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVH 262

Query: 380 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLL 439
             L  +Y + G I+ A +  ++A ++ P    A+ +L   L   + G+  +A +   T L
Sbjct: 263 GNLACVYYEQGLIDLAIDTYKRAIELQPHFPDAYCNLANAL--KEKGSVAEAEECYNTAL 320

Query: 440 KKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASM 499
           +        + LNN+  I  E+G  E A + ++ AL       +       +   AS   
Sbjct: 321 RLCPTHA--DSLNNLANIKREQGNIEEAVRLYRKAL------EVFPEFAAAHSNLASVLQ 372

Query: 500 LQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYV 559
            Q K  +    ++     + +         N+   L+++ D   A   Y   +     + 
Sbjct: 373 QQGKLQEALMHYKEA---IRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA 429

Query: 560 DAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFR 617
           DA+  LA+I K   N+  +I     ALK+   +P+A   L        DW    E  +
Sbjct: 430 DAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMK 487


>gi|397690319|ref|YP_006527573.1| TPR repeat-containing protein [Melioribacter roseus P3M]
 gi|395811811|gb|AFN74560.1| TPR repeat-containing protein [Melioribacter roseus P3M]
          Length = 470

 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 68/305 (22%), Positives = 129/305 (42%), Gaps = 24/305 (7%)

Query: 142 GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 201
           G  E+A  + +  L  +  N   L     +   + +Y++++E+++ A++  P    A   
Sbjct: 120 GMFEEAVESLEKALAIEPHNEEILYNLGALYEKKEKYNEAVEYFRMAVEKAPDYLEA-WY 178

Query: 202 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 261
            +G C   +G+L  A  A++  L  DPEN        ++ L+  E        EK   AF
Sbjct: 179 ELGYCYESMGELKDALAAYEMYLNGDPENYAGWYNKGIVHLRLEE-------FEKAINAF 231

Query: 262 EIYPYCAMALNYLANHF------FFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSY 315
           E+    A+  ++ ++ F      + TG++       + AL +    P     YYNL ++Y
Sbjct: 232 EL--SIALKDDFSSSWFNCGYAYYKTGKYKQAMTAYKKALKID---PDDETIYYNLGQTY 286

Query: 316 HSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDN 375
              G    A   Y  +   IN   ++   Y   G      G F+ AL +F K + I  + 
Sbjct: 287 EEMGSIANAIKCYTEA---INLDPDYYEAYLARGNCYDASGKFQLALRDFNKAITIASEP 343

Query: 376 CETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTA 435
            +   A   +   LG++ ++ E  + A +IDP +   ++ L E     + G  L++ K  
Sbjct: 344 VDAWYAKADLEYSLGKLNESIESYKNAVEIDPDNFNGWLKLAEAFF--EVGNWLESLKAY 401

Query: 436 RTLLK 440
           +  ++
Sbjct: 402 KECIR 406



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 90/427 (21%), Positives = 175/427 (40%), Gaps = 28/427 (6%)

Query: 168 QACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLD 227
           Q C++++     D L      LQ+ P          G+    + +  +A   F++AL L+
Sbjct: 46  QLCIDYDLVE--DGLYLTNALLQITPYNYEIWHFK-GIFLNNMFRFAEAYNCFRKALSLN 102

Query: 228 PENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLV 287
           P +V+  + +A+ +   +      + +E +++A  I P+    L  L     +  +    
Sbjct: 103 PNDVDTHINIAIAE---DNLGMFEEAVESLEKALAIEPHNEEILYNLGA--LYEKKEKYN 157

Query: 288 EQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYG 347
           E +    +AV    P    ++Y L   Y S G+ + A   Y      +N   E    +Y 
Sbjct: 158 EAVEYFRMAVE-KAPDYLEAWYELGYCYESMGELKDALAAYEMY---LNGDPENYAGWYN 213

Query: 348 LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 407
            G V L+L +F  A+  FE  + +  D   +    G+ Y + G+ ++A    +KA KIDP
Sbjct: 214 KGIVHLRLEEFEKAINAFELSIALKDDFSSSWFNCGYAYYKTGKYKQAMTAYKKALKIDP 273

Query: 408 RDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESA 467
            D   + +LG+     + G+  +A K     +    +    E     G  +   G+F+ A
Sbjct: 274 DDETIYYNLGQTY--EEMGSIANAIKCYTEAINLDPDYY--EAYLARGNCYDASGKFQLA 329

Query: 468 HQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTV 527
            + F  A      +T+       +   A    L++   +L    E+  N VE+  +    
Sbjct: 330 LRDFNKA------ITIASEPVDAWYAKAD---LEYSLGKLNESIESYKNAVEIDPDNFNG 380

Query: 528 LFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALK 587
              LA    ++ + + +   Y+  +   ++Y  AY  +A I    ++ Q  IE + +A +
Sbjct: 381 WLKLAEAFFEVGNWLESLKAYKECIRIDKNYARAYYSIAKINFLLSHTQEGIEYLKKAFE 440

Query: 588 VNGKYPN 594
           ++   PN
Sbjct: 441 LD---PN 444



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 71/289 (24%), Positives = 119/289 (41%), Gaps = 19/289 (6%)

Query: 355 LGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFI 414
           LG F  A+ + EK L I P N E L  LG +Y +  +  +A E  R A +  P   +A+ 
Sbjct: 119 LGMFEEAVESLEKALAIEPHNEEILYNLGALYEKKEKYNEAVEYFRMAVEKAPDYLEAWY 178

Query: 415 DLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDA 474
           +LG    S   G   DA       L   G+        N G++H    EFE A  +F+  
Sbjct: 179 ELGYCYES--MGELKDALAAYEMYLN--GDPENYAGWYNKGIVHLRLEEFEKAINAFE-- 232

Query: 475 LGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARL 534
               + + L D  + ++     A     K  Q    ++     +++  +  T+ +NL + 
Sbjct: 233 ----LSIALKDDFSSSWFNCGYAYYKTGKYKQAMTAYKK---ALKIDPDDETIYYNLGQT 285

Query: 535 LEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPN 594
            E++     A   Y   +    DY +AYL       A    QL++   N+A+ +  +  +
Sbjct: 286 YEEMGSIANAIKCYTEAINLDPDYYEAYLARGNCYDASGKFQLALRDFNKAITIASEPVD 345

Query: 595 ALSMLGDLELKNDDWVKAKETFRAA----SDATDG--KDSYATLSLGNW 637
           A     DLE       ++ E+++ A     D  +G  K + A   +GNW
Sbjct: 346 AWYAKADLEYSLGKLNESIESYKNAVEIDPDNFNGWLKLAEAFFEVGNW 394



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 29/113 (25%), Positives = 53/113 (46%), Gaps = 1/113 (0%)

Query: 124 DMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLE 183
           D    + W  KG + L   E E+A +AF++ +    D   +        +  G+Y  ++ 
Sbjct: 204 DPENYAGWYNKGIVHLRLEEFEKAINAFELSIALKDDFSSSWFNCGYAYYKTGKYKQAMT 263

Query: 184 FYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVA 236
            YK+AL++ P     I   +G    ++G +  A + +  A+ LDP+  EA +A
Sbjct: 264 AYKKALKIDPD-DETIYYNLGQTYEEMGSIANAIKCYTEAINLDPDYYEAYLA 315



 Score = 49.3 bits (116), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 60/335 (17%), Positives = 129/335 (38%), Gaps = 45/335 (13%)

Query: 105 EKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPA 164
           EK+E +  A +Y+  A          W   G    + GE++ A +A+++ L  D +N   
Sbjct: 151 EKKEKYNEAVEYFRMAVEKAPDYLEAWYELGYCYESMGELKDALAAYEMYLNGDPENYAG 210

Query: 165 LLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRAL 224
              +  V      +  ++  ++ ++ +      +     G   YK G+  +A  A+++AL
Sbjct: 211 WYNKGIVHLRLEEFEKAINAFELSIALKDDFSSS-WFNCGYAYYKTGKYKQAMTAYKKAL 269

Query: 225 QLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQH 284
           ++DP++      L     Q  E  G       +  A + Y                    
Sbjct: 270 KIDPDDETIYYNLG----QTYEEMG------SIANAIKCY-------------------- 299

Query: 285 FLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFP 344
                 TE      N  P    +Y      Y + G ++ A   +  ++   ++P   +  
Sbjct: 300 ------TE----AINLDPDYYEAYLARGNCYDASGKFQLALRDFNKAITIASEP---VDA 346

Query: 345 YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAK 404
           +Y    ++  LG    ++ +++  +EI PDN      L   + ++G   ++ +  ++  +
Sbjct: 347 WYAKADLEYSLGKLNESIESYKNAVEIDPDNFNGWLKLAEAFFEVGNWLESLKAYKECIR 406

Query: 405 IDPRDAQAFIDLGEL-LISSDTGAALDAFKTARTL 438
           ID   A+A+  + ++  + S T   ++  K A  L
Sbjct: 407 IDKNYARAYYSIAKINFLLSHTQEGIEYLKKAFEL 441



 Score = 47.4 bits (111), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 48/202 (23%), Positives = 82/202 (40%), Gaps = 19/202 (9%)

Query: 43  WLIIAREYFKQGKVEQ----FRQILEEGSSPEIDEYYADVRYERI-AILNALGVYY---- 93
           W      Y+K GK +Q    +++ L+     E   Y     YE + +I NA+  Y     
Sbjct: 245 WFNCGYAYYKTGKYKQAMTAYKKALKIDPDDETIYYNLGQTYEEMGSIANAIKCYTEAIN 304

Query: 94  -------TYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQ 146
                   YL +      +    F LA + +NKA  I       W  K  L  + G++ +
Sbjct: 305 LDPDYYEAYLAR--GNCYDASGKFQLALRDFNKAITIASEPVDAWYAKADLEYSLGKLNE 362

Query: 147 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 206
           +  ++K  +E D DN    L  A   F  G + +SL+ YK  +++  +   A    I   
Sbjct: 363 SIESYKNAVEIDPDNFNGWLKLAEAFFEVGNWLESLKAYKECIRIDKNYARA-YYSIAKI 421

Query: 207 RYKLGQLGKARQAFQRALQLDP 228
            + L    +  +  ++A +LDP
Sbjct: 422 NFLLSHTQEGIEYLKKAFELDP 443


>gi|302878329|ref|YP_003846893.1| hypothetical protein Galf_1101 [Gallionella capsiferriformans ES-2]
 gi|302581118|gb|ADL55129.1| Tetratricopeptide TPR_1 repeat-containing protein [Gallionella
           capsiferriformans ES-2]
          Length = 1646

 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 87/376 (23%), Positives = 152/376 (40%), Gaps = 42/376 (11%)

Query: 131 WVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQ 190
           W   G  L   G  E+A +A +  +E   D+V        V    GR  ++ + Y+RA+ 
Sbjct: 169 WKALGAALKQLGRTEEALAAMQRSVELSPDDVEVNYNLGVVLQEAGRLDEAEQSYRRAVA 228

Query: 191 VHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGI 250
           ++ +   A    +G+   +LG+  +A   ++RA+Q++P    A   LA   + + E A  
Sbjct: 229 LNAAYADA-HCNLGVVLQELGRASEAEACYRRAIQINPRYAAAYSNLANTLMASAELAEA 287

Query: 251 RKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYN 310
            K     +RA EI P  A A + L + F   G     E     AL +    P  +    +
Sbjct: 288 EKC---CRRALEINPGAADAHSTLGHIFEKQGDLAAAEASFRRALQIN---PDSAADLSH 341

Query: 311 LARSYHSKGDYEKAGLYYMAS-----------------VKEINKPHE------------- 340
           L     ++G  ++A + Y  +                 +KE  +P E             
Sbjct: 342 LGSVLKAQGRLDEADICYRRALQFKPDYADAHYNLATLLKEQGRPDEAENSYRQALRFNP 401

Query: 341 -FIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELL 399
            F++ YY +  V L       A + + + + + PD  E    LG +   LG+  +A+   
Sbjct: 402 DFVYAYYNVANVLLSQSRLTEAESGYREAIRLKPDFAEAHNNLGIVLRALGRPAEAEASY 461

Query: 400 RKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHF 459
            +A +I P  A+A  +LG  L   + G + DA ++    L  +   +  E   N+G +  
Sbjct: 462 LEAIRIQPDYAEAHSNLGITL--HELGRSSDAVRSINQALLIS--PMLAEAHCNLGNVLL 517

Query: 460 EKGEFESAHQSFKDAL 475
             G    A  S++ AL
Sbjct: 518 GLGRQAEAQASYRRAL 533



 Score = 47.0 bits (110), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 85/375 (22%), Positives = 152/375 (40%), Gaps = 36/375 (9%)

Query: 62  ILEEGSSPEIDEYYADVRYERIAILNA--------LGVYYTYLGKIETKQREKEEHFILA 113
           +L+E     +DE  A+  Y R   LNA        LGV    LG+              A
Sbjct: 209 VLQEAG--RLDE--AEQSYRRAVALNAAYADAHCNLGVVLQELGRASE-----------A 253

Query: 114 TQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEF 173
              Y +A +I+    + +      L+A  E+ +A    +  LE +     A      +  
Sbjct: 254 EACYRRAIQINPRYAAAYSNLANTLMASAELAEAEKCCRRALEINPGAADAHSTLGHIFE 313

Query: 174 NRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEA 233
            +G  + +   ++RALQ++P     +   +G      G+L +A   ++RALQ  P+  +A
Sbjct: 314 KQGDLAAAEASFRRALQINPDSAADLS-HLGSVLKAQGRLDEADICYRRALQFKPDYADA 372

Query: 234 LVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTET 293
              LA +     E     +     ++A    P    A   +AN      +    E     
Sbjct: 373 HYNLATL---LKEQGRPDEAENSYRQALRFNPDFVYAYYNVANVLLSQSRLTEAESGYRE 429

Query: 294 ALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQL 353
           A+ +    P  + ++ NL     + G   +A   Y+ +++   +P ++   +  LG    
Sbjct: 430 AIRLK---PDFAEAHNNLGIVLRALGRPAEAEASYLEAIR--IQP-DYAEAHSNLGITLH 483

Query: 354 KLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAF 413
           +LG    A+ +  + L I P   E    LG++ + LG+  +AQ   R+A + DP  A+A 
Sbjct: 484 ELGRSSDAVRSINQALLISPMLAEAHCNLGNVLLGLGRQAEAQASYRRALQCDPDFAEAH 543

Query: 414 IDL---GELLISSDT 425
            +L    +L + SDT
Sbjct: 544 SNLIFTMDLAVGSDT 558



 Score = 42.7 bits (99), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 41/154 (26%), Positives = 66/154 (42%), Gaps = 4/154 (2%)

Query: 142  GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 201
            G + +A + F+  L  + D   A           GR SD+ + Y+RA+++ P  P A   
Sbjct: 1069 GRLLEAEATFRRALAMNPDFAEAYGNLGNTLHALGRLSDAEDSYQRAIRIKPDFPDAYN- 1127

Query: 202  GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 261
             + +    LG+L +A  A +RALQ++P   EA   L  +     E   + +    +Q+A 
Sbjct: 1128 NLSITLKGLGRLVEAEGACRRALQINPGFAEAFSNLGFI---LKEQWRLDEAEASIQQAL 1184

Query: 262  EIYPYCAMALNYLANHFFFTGQHFLVEQLTETAL 295
             I   C  A   LA     +G+    E     AL
Sbjct: 1185 SINSTCVEAHCNLAATLLESGKSVEAEASLRRAL 1218



 Score = 39.7 bits (91), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 30/119 (25%), Positives = 54/119 (45%), Gaps = 3/119 (2%)

Query: 302  PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSA 361
            P  + +  NL  + H  G   +A   +    + +    +F   Y  LG     LG    A
Sbjct: 1052 PDDAAAINNLGLALHDVGRLLEAEATFR---RALAMNPDFAEAYGNLGNTLHALGRLSDA 1108

Query: 362  LTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 420
              ++++ + I PD  +    L      LG++ +A+   R+A +I+P  A+AF +LG +L
Sbjct: 1109 EDSYQRAIRIKPDFPDAYNNLSITLKGLGRLVEAEGACRRALQINPGFAEAFSNLGFIL 1167


>gi|390438980|ref|ZP_10227405.1| Serine/threonine protein kinase [Microcystis sp. T1-4]
 gi|389837610|emb|CCI31529.1| Serine/threonine protein kinase [Microcystis sp. T1-4]
          Length = 706

 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 82/330 (24%), Positives = 148/330 (44%), Gaps = 31/330 (9%)

Query: 155 LEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLG 214
           L+ + D + A  G+A       RYS++L  Y++A+Q++P       LG G    KLG+  
Sbjct: 358 LKINPDYLEAWQGKADTLLALQRYSEALNTYEKAIQINPDSAWQAWLGRGEALDKLGKNQ 417

Query: 215 KARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKM----QRAFEIYPYCAMA 270
           +A ++F+R L L+    +A    A + L+  + +  +K +EK+    Q   +I+     +
Sbjct: 418 EALESFERVLSLNAAASQAWQGKADIYLELQQYSAAQKALEKLLTFQQNDAKIWYKKGWS 477

Query: 271 LNYLANHFFFTGQHFLVEQLTETALAVTNHGP----TKSHSYYNLARSYHSKGDYEKAGL 326
           L  L +   + G     +Q    AL +          K +S+Y L R   +   Y KAG 
Sbjct: 478 LQNLED---YEGAVKAYDQ----ALVIEPDNSLIWYQKGNSFYQLNRINDALESYSKAGQ 530

Query: 327 YYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIY 386
           +          P +F   +Y  G +  KLG    AL  F +  E   +  +     G + 
Sbjct: 531 F---------NP-QFSQAHYSQGIILQKLGRKSEALQAFTQATEANSNYYQAWLNQGALL 580

Query: 387 VQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGEE 445
            Q+ + ++A     KA +I  + A+ FI +G       D   A++A++ A    K    +
Sbjct: 581 HQMERFQEAIVSYEKARRISSQKAEVFIGIGNAWYRLGDYSQAINAYQQAIQRQK----D 636

Query: 446 VPIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
            P E   ++G   F+ G++E A Q+++++L
Sbjct: 637 NP-ETWKSLGNSCFKLGQYERAIQAYQESL 665


>gi|332706150|ref|ZP_08426220.1| hypothetical protein LYNGBM3L_15000 [Moorea producens 3L]
 gi|332355086|gb|EGJ34556.1| hypothetical protein LYNGBM3L_15000 [Moorea producens 3L]
          Length = 1758

 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 98/441 (22%), Positives = 191/441 (43%), Gaps = 55/441 (12%)

Query: 82  RIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAK 141
           ++ IL ALG+     G  E  +   ++   LA Q  +++  I     +     GQ+  ++
Sbjct: 457 QVNILGALGLAQIRQGNYEKARDSYQQVLALARQIKDRSEEI-----TALNFIGQVYESQ 511

Query: 142 GEVEQASSAFK--IVLEA---DRDNVPALLGQ-ACVEFNRGRYSDSLEFYKRALQVHPSC 195
           G+ +QA   ++  +V+     D+ +   L      V  N G Y  +L++Y++ L +  S 
Sbjct: 512 GKYDQALDYYQQGLVIAKKINDKKSTGTLFNNIGLVYSNWGNYKQALDYYQQGLAISKSL 571

Query: 196 PGAIRLG-----IGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDL--QANEAA 248
             +I +      IG    K G+  +A   +Q+AL ++    + L  LA + +    N   
Sbjct: 572 NDSIGIATKLNNIGSIYEKQGKYSQALDYYQQALAIN----QKLGDLARVRVAPNLNNIG 627

Query: 249 GIRKGMEKMQRAFEIYPYC-------------AMALNYLANHFFFTGQHFLVEQLTETAL 295
            +     K  RA E Y                   LN +   +   G++    +  + AL
Sbjct: 628 SVYHSQGKYDRALEYYQQALVIHQDLSERSGEGTTLNNIGEVYKSQGEYDRALEYYQQAL 687

Query: 296 AV---TNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASV---KEINKPHEFIFPYYGLG 349
           A+      G  K+ +  N+   YHSKG+Y++A  YY  ++   +++++          +G
Sbjct: 688 AIYKDIGVGSQKATTLNNIGGVYHSKGEYDRALEYYQQTLVIYQDLSERSGEGTTLNNIG 747

Query: 350 QVQLKLGDFRSALTNFEKVLEIYPDNCE------TLKALGHIYVQLGQIEKAQE------ 397
            V    G++  A   +++ L I+ D  E      TL  +G +Y   G+  +A+E      
Sbjct: 748 LVYDSQGEYDRANEYYQQALVIHQDIGERSGEATTLNNIGAVYYARGKYAQAKEYFQQSL 807

Query: 398 LLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGEEVP-IEVLNNIG 455
           ++RK       +A +  ++G +  S  +   A D ++ A  + +  GE +     LNNIG
Sbjct: 808 VIRKDIGERSGEANSLNNIGAVYKSQGEYDRANDYYQQALVIYQDIGERLGEGTTLNNIG 867

Query: 456 VIHFEKGEFESAHQSFKDALG 476
            ++  +GE++ A + ++ +LG
Sbjct: 868 SVYDNQGEYDQASEYYQQSLG 888



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 76/348 (21%), Positives = 145/348 (41%), Gaps = 36/348 (10%)

Query: 164 ALLGQACVEFNRGRYSDSLEFYKRALQV-----HPSCPGAIRLGIGLCRYKLGQLGKARQ 218
            L+    V + +G+Y  ++ +Y+RAL +     +P+  GA   GIG   Y  G+ G+A  
Sbjct: 380 TLVNIGQVYYKQGKYQQTINYYQRALAISKKIENPTGKGANLWGIGQAYYAWGKPGQAID 439

Query: 219 AFQRALQL------DPENVEALVALAVMDLQANEAAGIRKGMEK---MQRAFEIYPYCAM 269
            +Q+AL +          V  L AL +  ++       R   ++   + R  +       
Sbjct: 440 YYQQALVIFRKIKNYSHQVNILGALGLAQIRQGNYEKARDSYQQVLALARQIKDRSEEIT 499

Query: 270 ALNYLANHFFFTGQHFLVEQLTETALAVT---NHGPTKSHSYYNLARSYHSKGDYEKAGL 326
           ALN++   +   G++       +  L +    N   +    + N+   Y + G+Y++A  
Sbjct: 500 ALNFIGQVYESQGKYDQALDYYQQGLVIAKKINDKKSTGTLFNNIGLVYSNWGNYKQALD 559

Query: 327 YY---MASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCE------ 377
           YY   +A  K +N           +G +  K G +  AL  +++ L I     +      
Sbjct: 560 YYQQGLAISKSLNDSIGIATKLNNIGSIYEKQGKYSQALDYYQQALAINQKLGDLARVRV 619

Query: 378 --TLKALGHIYVQLGQIEKAQELLRKAAKID------PRDAQAFIDLGELLIS-SDTGAA 428
              L  +G +Y   G+ ++A E  ++A  I         +     ++GE+  S  +   A
Sbjct: 620 APNLNNIGSVYHSQGKYDRALEYYQQALVIHQDLSERSGEGTTLNNIGEVYKSQGEYDRA 679

Query: 429 LDAFKTARTLLKKAG-EEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
           L+ ++ A  + K  G        LNNIG ++  KGE++ A + ++  L
Sbjct: 680 LEYYQQALAIYKDIGVGSQKATTLNNIGGVYHSKGEYDRALEYYQQTL 727



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 104/468 (22%), Positives = 196/468 (41%), Gaps = 82/468 (17%)

Query: 46   IAREYFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAI-LNALGVYYTYLGKIETKQR 104
            I   Y KQGK  Q     ++  +  I++   D+   R+A  LN +G  Y   GK +    
Sbjct: 584  IGSIYEKQGKYSQALDYYQQALA--INQKLGDLARVRVAPNLNNIGSVYHSQGKYDR--- 638

Query: 105  EKEEHFILATQYYNKASRI--DMHEPS----TWVGKGQLLLAKGEVEQASSAFKIVLEAD 158
                    A +YY +A  I  D+ E S    T    G++  ++GE ++A   ++  L   
Sbjct: 639  --------ALEYYQQALVIHQDLSERSGEGTTLNNIGEVYKSQGEYDRALEYYQQALAIY 690

Query: 159  RD------NVPALLGQACVEFNRGRYSDSLEFYKRALQVHP-----SCPGAIRLGIGLCR 207
            +D          L     V  ++G Y  +LE+Y++ L ++      S  G     IGL  
Sbjct: 691  KDIGVGSQKATTLNNIGGVYHSKGEYDRALEYYQQTLVIYQDLSERSGEGTTLNNIGLVY 750

Query: 208  YKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYC 267
               G+  +A + +Q+AL +                  ++  G R G              
Sbjct: 751  DSQGEYDRANEYYQQALVI------------------HQDIGERSGE------------- 779

Query: 268  AMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKS---HSYYNLARSYHSKGDYEKA 324
            A  LN +   ++  G++   ++  + +L +      +S   +S  N+   Y S+G+Y++A
Sbjct: 780  ATTLNNIGAVYYARGKYAQAKEYFQQSLVIRKDIGERSGEANSLNNIGAVYKSQGEYDRA 839

Query: 325  GLYYMASV---KEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPD------N 375
              YY  ++   ++I +          +G V    G++  A   +++ L I  D       
Sbjct: 840  NDYYQQALVIYQDIGERLGEGTTLNNIGSVYDNQGEYDQASEYYQQSLGIRQDLGDRSGE 899

Query: 376  CETLKALGHIYVQLGQIEKAQELLRKA----AKIDPRDAQAFI--DLGELLIS-SDTGAA 428
              TL  +G +Y   G+  +AQE  +++      I  R  QA    ++G +  +  D   A
Sbjct: 900  STTLNNIGRVYNARGEYAQAQEYFQQSLAISQNIGVRSLQATTLDNIGTVYSNWGDYTKA 959

Query: 429  LDAFKTARTLLKKAGEEVPI-EVLNNIGVIHFEKGEFESAHQSFKDAL 475
            L+  + +  + +  G+   +   LNNIG ++ ++GE++ A++ F+ AL
Sbjct: 960  LNYHQQSLEISQDIGDNQGVGTTLNNIGTVYGDQGEYDRANEYFQQAL 1007


>gi|156341942|ref|XP_001620825.1| hypothetical protein NEMVEDRAFT_v1g222670 [Nematostella vectensis]
 gi|156206191|gb|EDO28725.1| predicted protein [Nematostella vectensis]
          Length = 1459

 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 90/412 (21%), Positives = 172/412 (41%), Gaps = 78/412 (18%)

Query: 169 ACVEFNRGRYSDSLEFYKRALQVHP-----SCPGAIRLGIGLCRYKLGQLGKARQAFQRA 223
             V+ + G Y +++++Y++ALQV+      S    +RL IG  + +LG   +A + FQ+A
Sbjct: 515 GVVQQSLGNYEEAMKYYQQALQVYERTGNESKQANVRLNIGGVQQRLGNYEEAMKYFQQA 574

Query: 224 LQL-DPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTG 282
           LQ+ +    E+  A A M++      G+++ +   + A + Y           N     G
Sbjct: 575 LQVFERTGNESDQAGARMNI-----GGVQQRLGNYEEAMKYYQQALQVFERTGNESDQAG 629

Query: 283 QHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASV---------- 332
                                      N+     S G+YE+A  YY  ++          
Sbjct: 630 VRL------------------------NIGGVQQSLGNYEEAMKYYQQALQVYERTGNES 665

Query: 333 KEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIY------PDNCETLKALGHIY 386
           K+ N  H        +G VQ  LG++  A+  +++VL+++       D  +    +G + 
Sbjct: 666 KQANVRH-------NIGVVQQSLGNYEEAMKYYQQVLQVFERTGNESDQADVRHNIGVVQ 718

Query: 387 VQLGQIEKAQELLRKAAKIDPRDA----QAFIDLGELLISSDTG---AALDAFKTARTLL 439
             LG  E+A +  ++A ++  R      QA +     ++    G    A+  ++ A  + 
Sbjct: 719 QSLGNYEEAMKYYQQALQVFERTGNESKQANVRHNIGVVQQSLGNYEEAMKYYQQALQVF 778

Query: 440 KKAGEEVP-IEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASAS 498
           ++ G E    +V NNIGV+    G +E A + ++ AL   ++    +   K  V ++  S
Sbjct: 779 ERTGNESDQADVRNNIGVVQQSLGNYEEAMKYYQQAL--QVFERTGNESAKAGVYNSIGS 836

Query: 499 MLQFKDMQL---------FHRFENDGNHVE-LPWNKVTVLFNLARLLEQIHD 540
           M + K   L         F  FE+    ++ LP +K+T +     + +Q+ D
Sbjct: 837 MYRKKQNYLDAESHFTKSFELFESCFTKIQSLPDSKITFVDTFIHVCQQLVD 888



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 130/638 (20%), Positives = 252/638 (39%), Gaps = 120/638 (18%)

Query: 171 VEFNRGRYSDSLEFYKRALQV-----HPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 225
           V+ + G Y +++++Y++ALQV     + S    +RL IG  + +LG   +A + +Q+ALQ
Sbjct: 237 VQDSLGNYEEAMKYYQQALQVFERTGNESEQAGVRLNIGGVQQRLGNYEEAMKYYQQALQ 296

Query: 226 LDPENVEALVALAVMDLQANEA--AGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQ 283
                        V +   NE+  AG+R  +  +Q++   Y             F  TG 
Sbjct: 297 -------------VFERTGNESEQAGVRHNIGVVQQSLGNYEEAMKYYQQALQVFERTG- 342

Query: 284 HFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIF 343
                   E+  A   H         N+     S G+YE+A  YY  +++        +F
Sbjct: 343 -------NESKQADVRH---------NIGVVQQSLGNYEEAMKYYQQALQ--------VF 378

Query: 344 PYYG-----------LGQVQLKLGDFRSALTNFEKVLEIY------PDNCETLKALGHIY 386
              G           +G VQ +LG++  A+  F++ L+++       D       +G + 
Sbjct: 379 ERTGNESDQADVRLNIGGVQQRLGNYEEAMKYFQQALQVFERTGNESDQAGVRMNIGGVQ 438

Query: 387 VQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKA---- 442
            +LG  E+A +  ++A ++  R        G  L        LD ++ A    ++A    
Sbjct: 439 QRLGNYEEAMKYYQQALQVFERTGNESDQAGVRLNIGGVQRRLDNYEEAMKYYQQALQVF 498

Query: 443 ----GEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASAS 498
                E    +V +NIGV+    G +E A + ++ AL      T  +SK     ++    
Sbjct: 499 ERTGNESKQADVRHNIGVVQQSLGNYEEAMKYYQQAL-QVYERTGNESKQANVRLNIGGV 557

Query: 499 MLQFKD----MQLFHR----FENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRL 550
             +  +    M+ F +    FE  GN  +    +     N+  + +++ +   A   Y+ 
Sbjct: 558 QQRLGNYEEAMKYFQQALQVFERTGNESD----QAGARMNIGGVQQRLGNYEEAMKYYQQ 613

Query: 551 ILFKYQ------DYVDAYLRLAAIAKARNNLQLSIELVNEALKV------NGKYPNALSM 598
            L  ++      D     L +  + ++  N + +++   +AL+V        K  N    
Sbjct: 614 ALQVFERTGNESDQAGVRLNIGGVQQSLGNYEEAMKYYQQALQVYERTGNESKQANVRHN 673

Query: 599 LGDLELKNDDWVKAKETFRAA----------SDATDGKDSYATLSLGNWNYFAALRNEKR 648
           +G ++    ++ +A + ++            SD  D + +   +     NY  A++  ++
Sbjct: 674 IGVVQQSLGNYEEAMKYYQQVLQVFERTGNESDQADVRHNIGVVQQSLGNYEEAMKYYQQ 733

Query: 649 APKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEA--AS 706
           A ++     E+      +  V+H          GVV    G ++ +   + Q  +    +
Sbjct: 734 ALQV----FERTGNESKQANVRHN--------IGVVQQSLGNYEEAMKYYQQALQVFERT 781

Query: 707 GSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKF 744
           G+   Q  DV  N+  V  + GN+  AMK YQ  L+ F
Sbjct: 782 GNESDQ-ADVRNNIGVVQQSLGNYEEAMKYYQQALQVF 818



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 75/342 (21%), Positives = 150/342 (43%), Gaps = 36/342 (10%)

Query: 169 ACVEFNRGRYSDSLEFYKRALQV-----HPSCPGAIRLGIGLCRYKLGQLGKARQAFQRA 223
             V+ + G Y +++++Y++ALQV     + S    +RL IG  + +LG   +A + FQ+A
Sbjct: 355 GVVQQSLGNYEEAMKYYQQALQVFERTGNESDQADVRLNIGGVQQRLGNYEEAMKYFQQA 414

Query: 224 LQL----DPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFF 279
           LQ+      E+ +A V + +  +Q        + M+  Q+A +++       +       
Sbjct: 415 LQVFERTGNESDQAGVRMNIGGVQ-QRLGNYEEAMKYYQQALQVFERTGNESDQAGVRLN 473

Query: 280 FTGQHFLVEQLTET------ALAV---TNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 330
             G    ++   E       AL V   T +   ++   +N+     S G+YE+A  YY  
Sbjct: 474 IGGVQRRLDNYEEAMKYYQQALQVFERTGNESKQADVRHNIGVVQQSLGNYEEAMKYYQQ 533

Query: 331 SVK---EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIY------PDNCETLKA 381
           +++         +       +G VQ +LG++  A+  F++ L+++       D       
Sbjct: 534 ALQVYERTGNESKQANVRLNIGGVQQRLGNYEEAMKYFQQALQVFERTGNESDQAGARMN 593

Query: 382 LGHIYVQLGQIEKAQELLRKAAKIDPRDA----QAFIDLGELLISSDTG---AALDAFKT 434
           +G +  +LG  E+A +  ++A ++  R      QA + L    +    G    A+  ++ 
Sbjct: 594 IGGVQQRLGNYEEAMKYYQQALQVFERTGNESDQAGVRLNIGGVQQSLGNYEEAMKYYQQ 653

Query: 435 ARTLLKKAGEEVP-IEVLNNIGVIHFEKGEFESAHQSFKDAL 475
           A  + ++ G E     V +NIGV+    G +E A + ++  L
Sbjct: 654 ALQVYERTGNESKQANVRHNIGVVQQSLGNYEEAMKYYQQVL 695



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 87/408 (21%), Positives = 172/408 (42%), Gaps = 53/408 (12%)

Query: 102 KQREKEEHFILATQYY----NKASRIDMHEPSTWVGKGQLLLAKGEVEQA----SSAFKI 153
           K RE  E +  A Q Y    N++ + D+      +  G +  +KG  E+A      A ++
Sbjct: 27  KHREALEQYQQALQVYISTGNESDQADVR-----LNIGAVYQSKGNYEEAMKYCQQALQV 81

Query: 154 VLEADRDNVPALLGQAC--VEFNRGRYSDSLEFYKRALQVHPSC-----PGAIRLGIGLC 206
            +    ++  A + Q+   V+ + G Y +++++Y++ALQV+ S         +RL IG  
Sbjct: 82  YISTGNESKQADVRQSIGLVQQSLGNYEEAIKYYQQALQVYISTGNESKQAGVRLNIGAV 141

Query: 207 RYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPY 266
              LG   +A +  Q+ALQ           + +     ++ A +R+ +  +Q++   Y  
Sbjct: 142 YQSLGNYEEAMKYCQQALQ-----------VYISTGNESKQADVRQSIGLVQQSLGNYE- 189

Query: 267 CAMALNYL--ANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA 324
              A+ Y   A   F   +     Q        T +   ++    N+     S G+YE+A
Sbjct: 190 --EAIKYYQQALQVFIALEAMKYYQQALQVFESTGNESKQADVRQNIGLVQDSLGNYEEA 247

Query: 325 GLYYMASVK---EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIY------PDN 375
             YY  +++         E       +G VQ +LG++  A+  +++ L+++       + 
Sbjct: 248 MKYYQQALQVFERTGNESEQAGVRLNIGGVQQRLGNYEEAMKYYQQALQVFERTGNESEQ 307

Query: 376 CETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDA----QAFIDLGELLISSDTG---AA 428
                 +G +   LG  E+A +  ++A ++  R      QA +     ++    G    A
Sbjct: 308 AGVRHNIGVVQQSLGNYEEAMKYYQQALQVFERTGNESKQADVRHNIGVVQQSLGNYEEA 367

Query: 429 LDAFKTARTLLKKAGEEVP-IEVLNNIGVIHFEKGEFESAHQSFKDAL 475
           +  ++ A  + ++ G E    +V  NIG +    G +E A + F+ AL
Sbjct: 368 MKYYQQALQVFERTGNESDQADVRLNIGGVQQRLGNYEEAMKYFQQAL 415



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 131/621 (21%), Positives = 257/621 (41%), Gaps = 80/621 (12%)

Query: 176 GRYSDSLEFYKRALQVHPSCPGA-----IRLGIGLCRYKLGQLGKARQAFQRALQLDPEN 230
           G Y +++++ ++ALQV+ S         +R  IGL +  LG   +A + +Q+ALQ+    
Sbjct: 146 GNYEEAMKYCQQALQVYISTGNESKQADVRQSIGLVQQSLGNYEEAIKYYQQALQVFIA- 204

Query: 231 VEAL----VALAVMDLQANEA--AGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQH 284
           +EA+     AL V +   NE+  A +R+ +  +Q +   Y             F  TG  
Sbjct: 205 LEAMKYYQQALQVFESTGNESKQADVRQNIGLVQDSLGNYEEAMKYYQQALQVFERTGNE 264

Query: 285 FLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK---EINKPHEF 341
                 +E A    N G  +              G+YE+A  YY  +++         E 
Sbjct: 265 ------SEQAGVRLNIGGVQ-----------QRLGNYEEAMKYYQQALQVFERTGNESEQ 307

Query: 342 IFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKA------LGHIYVQLGQIEKA 395
               + +G VQ  LG++  A+  +++ L+++       K       +G +   LG  E+A
Sbjct: 308 AGVRHNIGVVQQSLGNYEEAMKYYQQALQVFERTGNESKQADVRHNIGVVQQSLGNYEEA 367

Query: 396 QELLRKAAKIDPRDA----QAFIDLGELLISSDTG---AALDAFKTARTLLKKAGEEVP- 447
            +  ++A ++  R      QA + L    +    G    A+  F+ A  + ++ G E   
Sbjct: 368 MKYYQQALQVFERTGNESDQADVRLNIGGVQQRLGNYEEAMKYFQQALQVFERTGNESDQ 427

Query: 448 IEVLNNIGVIHFEKGEFESAHQSFKDAL------GD-----GIWLTLLDSKTKTYVIDAS 496
             V  NIG +    G +E A + ++ AL      G+     G+ L +   + +   +D  
Sbjct: 428 AGVRMNIGGVQQRLGNYEEAMKYYQQALQVFERTGNESDQAGVRLNIGGVQRR---LDNY 484

Query: 497 ASMLQF--KDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFK 554
              +++  + +Q+F R  N+    ++  N   V  +L    E +     A  +Y     +
Sbjct: 485 EEAMKYYQQALQVFERTGNESKQADVRHNIGVVQQSLGNYEEAMKYYQQALQVYERTGNE 544

Query: 555 YQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPN------ALSMLGDLELKNDD 608
            +   +  L +  + +   N + +++   +AL+V  +  N      A   +G ++ +  +
Sbjct: 545 SKQ-ANVRLNIGGVQQRLGNYEEAMKYFQQALQVFERTGNESDQAGARMNIGGVQQRLGN 603

Query: 609 WVKAKETFRAA---SDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYT 665
           + +A + ++ A    + T  +   A + L       +L N + A K    + ++A ++Y 
Sbjct: 604 YEEAMKYYQQALQVFERTGNESDQAGVRLNIGGVQQSLGNYEEAMK----YYQQALQVYE 659

Query: 666 RVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEA--ASGSVFVQMPDVWINLAHV 723
           R     +      +  GVV    G ++ +   + QV +    +G+   Q  DV  N+  V
Sbjct: 660 RT-GNESKQANVRHNIGVVQQSLGNYEEAMKYYQQVLQVFERTGNESDQ-ADVRHNIGVV 717

Query: 724 YFAQGNFALAMKMYQNCLRKF 744
             + GN+  AMK YQ  L+ F
Sbjct: 718 QQSLGNYEEAMKYYQQALQVF 738


>gi|220928054|ref|YP_002504963.1| hypothetical protein Ccel_0602 [Clostridium cellulolyticum H10]
 gi|219998382|gb|ACL74983.1| Tetratricopeptide TPR_2 repeat protein [Clostridium cellulolyticum
           H10]
          Length = 586

 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 79/353 (22%), Positives = 136/353 (38%), Gaps = 41/353 (11%)

Query: 99  IETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEAD 158
           I+ + R  + +F  A   Y     I     + +   G +   KG   +A S ++ VLE  
Sbjct: 157 IQAENRYSQGNFDFAYDIYKGMLDITQAPGNLFFNYGNVCFKKGMFREAISCYRKVLELS 216

Query: 159 RDNVPALL---GQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGK 215
                A L         FN  +   +LE + +AL+++P C  A + GIG      G+   
Sbjct: 217 GSITKAYLVYINLGATYFNMQKTELALENFFKALEINPQCSKA-KEGIGKVYTATGRQAD 275

Query: 216 ARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLA 275
           A   ++  L+ D  N E L++L  + +   E   I +  E+ +R  +  P  A A   L 
Sbjct: 276 AVIYYEELLKNDDSNYELLLSLGKLLV---ELGNIDEAKERFERCIKNNPRQADAYILLG 332

Query: 276 NHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEI 335
             F   GQ+    ++ +T + +     T    +YNLA  Y    +Y+ A   Y  ++   
Sbjct: 333 KLFMSVGQYSEASKVFKTYITINGVDYT---GHYNLAECYFENKEYKNAIAEYKQTISLN 389

Query: 336 NKPHE-------------------------------FIFPYYGLGQVQLKLGDFRSALTN 364
            K HE                               FI  Y  LG V  K      +L  
Sbjct: 390 QKSHESLFKLGLIYDKTDETEKAIDCYRAVIQLMPNFIDAYNNLGIVFAKSQRHVESLAA 449

Query: 365 FEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 417
           +   +++ PDN      +G +  ++ + E + +   +A K++P D   +  LG
Sbjct: 450 YTAGIKLNPDNFRLYFNMGVVLFEIKRYEDSADAFARAVKLNPDDKDVYYYLG 502



 Score = 47.8 bits (112), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 68/130 (52%), Gaps = 4/130 (3%)

Query: 347 GLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKID 406
           G+G+V    G    A+  +E++L+    N E L +LG + V+LG I++A+E   +  K +
Sbjct: 262 GIGKVYTATGRQADAVIYYEELLKNDDSNYELLLSLGKLLVELGNIDEAKERFERCIKNN 321

Query: 407 PRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFES 466
           PR A A+I LG+L +S   G   +A K  +T +   G +       N+   +FE  E+++
Sbjct: 322 PRQADAYILLGKLFMS--VGQYSEASKVFKTYITINGVDYTGHY--NLAECYFENKEYKN 377

Query: 467 AHQSFKDALG 476
           A   +K  + 
Sbjct: 378 AIAEYKQTIS 387


>gi|113475214|ref|YP_721275.1| hypothetical protein Tery_1518 [Trichodesmium erythraeum IMS101]
 gi|110166262|gb|ABG50802.1| TPR repeat [Trichodesmium erythraeum IMS101]
          Length = 597

 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 59/280 (21%), Positives = 131/280 (46%), Gaps = 12/280 (4%)

Query: 143 EVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLG 202
           +++ A   +K  ++AD+++    L        +G   +++   ++AL ++P+    + + 
Sbjct: 106 QLDNAIDCYKRAIQADKNSAEYHLNLGIALTEKGIIEEAIASLEKALTINPNYQ-QVNMA 164

Query: 203 IGLCRYKLGQLGKARQAFQRALQLDP-----ENVEALVALAVMDLQANEAAGIRKGMEKM 257
           +G      G+L KA  ++ +AL +DP     +N     AL  + +       +++     
Sbjct: 165 LGDIFQTQGKLDKAISSYIKALSIDPKYSKNQNPNNFDALLSLGMALYRRGNLKESQITY 224

Query: 258 QRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHS 317
           ++A EI P+    L  +A  F+  G+  + E   +   AV +  PT + ++ NL      
Sbjct: 225 EQALEINPHSTECLTNIAATFYEQGRVDIAEACYQ---AVVDLIPTSTDAHINLGFLLSQ 281

Query: 318 KGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCE 377
           +  Y++A   Y A++K+       +    GL +V  K  D+++    ++K+L++  ++ +
Sbjct: 282 QEKYDEAIECYKAALKQ---DQNSVNAIAGLAEVFGKKSDWKTVFQLYQKILKLDSNSAD 338

Query: 378 TLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 417
               LG    ++G+ ++A     KA  I+ R  +A+ +LG
Sbjct: 339 AYAKLGISLREIGKSKEAIPQFEKAISINNRHIKAYANLG 378



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 75/323 (23%), Positives = 132/323 (40%), Gaps = 52/323 (16%)

Query: 354 KLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAF 413
           K G+ + A   +EK++++ P+N + L  LG +  Q+G  + A  L++KA  ++P + +  
Sbjct: 35  KNGELQKAKVIYEKIIQLEPNNSQVLNYLGVLKAQMGDNKSAISLIKKAVNLEPLNFKYL 94

Query: 414 IDLGELLISSDTGAALDAFKTARTLLKKA--GEEVPIEVLNNIGVIHFEKGEFESA---- 467
            +LG      +T  A +    A    K+A   ++   E   N+G+   EKG  E A    
Sbjct: 95  NNLG------NTYRAFEQLDNAIDCYKRAIQADKNSAEYHLNLGIALTEKGIIEEAIASL 148

Query: 468 ---------HQSFKDALGDGIWLTL--LDSKTKTYV----IDASASMLQFKD-------- 504
                    +Q    ALGD I+ T   LD    +Y+    ID   S  Q  +        
Sbjct: 149 EKALTINPNYQQVNMALGD-IFQTQGKLDKAISSYIKALSIDPKYSKNQNPNNFDALLSL 207

Query: 505 -MQLFHRFENDGN----------HVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILF 553
            M L+ R    GN           +E+  +    L N+A    +      A   Y+ ++ 
Sbjct: 208 GMALYRR----GNLKESQITYEQALEINPHSTECLTNIAATFYEQGRVDIAEACYQAVVD 263

Query: 554 KYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAK 613
                 DA++ L  +   +     +IE    ALK +    NA++ L ++  K  DW    
Sbjct: 264 LIPTSTDAHINLGFLLSQQEKYDEAIECYKAALKQDQNSVNAIAGLAEVFGKKSDWKTVF 323

Query: 614 ETFRAASDA-TDGKDSYATLSLG 635
           + ++      ++  D+YA L + 
Sbjct: 324 QLYQKILKLDSNSADAYAKLGIS 346



 Score = 49.7 bits (117), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 55/267 (20%), Positives = 105/267 (39%), Gaps = 36/267 (13%)

Query: 204 GLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQA------------------- 244
            L  +K G+L KA+  +++ +QL+P N + L  L V+  Q                    
Sbjct: 30  ALSFHKNGELQKAKVIYEKIIQLEPNNSQVLNYLGVLKAQMGDNKSAISLIKKAVNLEPL 89

Query: 245 -----NEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTN 299
                N      +  E++  A + Y     A    A +    G     + + E A+A   
Sbjct: 90  NFKYLNNLGNTYRAFEQLDNAIDCYKRAIQADKNSAEYHLNLGIALTEKGIIEEAIASLE 149

Query: 300 HGPTKSHSYYN----LARSYHSKGDYEKAGLYYMASV------KEINKPHEFIFPYYGLG 349
              T + +Y      L   + ++G  +KA   Y+ ++       +   P+ F      LG
Sbjct: 150 KALTINPNYQQVNMALGDIFQTQGKLDKAISSYIKALSIDPKYSKNQNPNNFD-ALLSLG 208

Query: 350 QVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRD 409
               + G+ + +   +E+ LEI P + E L  +   + + G+++ A+   +    + P  
Sbjct: 209 MALYRRGNLKESQITYEQALEINPHSTECLTNIAATFYEQGRVDIAEACYQAVVDLIPTS 268

Query: 410 AQAFIDLGELLISSDT-GAALDAFKTA 435
             A I+LG LL   +    A++ +K A
Sbjct: 269 TDAHINLGFLLSQQEKYDEAIECYKAA 295


>gi|320538489|ref|ZP_08038352.1| tetratricopeptide repeat protein [Treponema phagedenis F0421]
 gi|320144660|gb|EFW36413.1| tetratricopeptide repeat protein [Treponema phagedenis F0421]
          Length = 390

 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 63/273 (23%), Positives = 114/273 (41%), Gaps = 8/273 (2%)

Query: 134 KGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHP 193
           +G  LL   + ++A   FK +LE +  N  AL+G       +    +++E+Y   L  HP
Sbjct: 43  EGYALLKIEDTDKAIEEFKKILELEEHNNYALVGLGDAARKKENCKEAIEYYTECLTYHP 102

Query: 194 SCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKG 253
               A+  G+  C   L Q  KA Q +++ L  D  N+  L  +A    + ++    ++ 
Sbjct: 103 GNNYAL-FGLADCYKSLNQYAKAIQIWEQYLLHDDTNITVLTRIADAYRKTHDFQNSKRL 161

Query: 254 MEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLAR 313
             K+    +  PY  + L +L   F    +     Q     +  TN          ++  
Sbjct: 162 YTKVLAIEKNNPYALIGLGHLHYDFKKYKEALFYWQ----KVVDTNPENIDIRVLTSIGN 217

Query: 314 SYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYP 373
            Y     ++K  +Y+  ++++   P  F +  +GL      LG    ++  +  +LE  P
Sbjct: 218 CYRKMKLFDKGAMYFEKTLEK--DPKNF-YGLFGLADCYRGLGQQEKSIKYWAAILEKDP 274

Query: 374 DNCETLKALGHIYVQLGQIEKAQELLRKAAKID 406
            N   L  +G  Y  +G  +KA+E  +KA  ID
Sbjct: 275 KNKVILTRVGDAYRHIGMYDKAEETYQKALDID 307


>gi|209528249|ref|ZP_03276714.1| Tetratricopeptide TPR_2 repeat protein [Arthrospira maxima CS-328]
 gi|209491321|gb|EDZ91711.1| Tetratricopeptide TPR_2 repeat protein [Arthrospira maxima CS-328]
          Length = 915

 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 61/273 (22%), Positives = 119/273 (43%), Gaps = 10/273 (3%)

Query: 142 GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 201
           G++  A SA+    E   +   +    A +  N G + +++ FY++A+ + P+    +  
Sbjct: 51  GQLMAAMSAYTKAFELAPNQAISYAYLAQIYRNMGWFDEAISFYQQAIDLSPNW-ADLHY 109

Query: 202 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 261
            +G   +  G +  A   +++A+ L+P+  +A +    M L+ NE   I   ++ +Q+  
Sbjct: 110 HLGSALHWQGNIEGAIGCYEKAIALNPKLGQAYLD---MGLRLNERGDIDTAIKVLQQGG 166

Query: 262 EIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDY 321
              P      N L    +   Q   +++         N  PT+   Y NL  ++  +G  
Sbjct: 167 INCPNFKEIFNTLG---YLQLQQNQIDEAIAIFQEALNIDPTEPLVYNNLGWAWTYQGKL 223

Query: 322 EKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKA 381
            +A   Y    K I+   +    Y  LG++  +  + R A++ F+K + I PDN      
Sbjct: 224 SEAIAAYQ---KAISLKPDLAIAYSNLGKLWQQKNNHRQAISYFQKAIAIEPDNIMFYSD 280

Query: 382 LGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFI 414
            G   + +G + +A    +KA  IDP+  Q +I
Sbjct: 281 CGSSCLIIGWLSQAMACFQKAIAIDPKFVQGYI 313



 Score = 48.5 bits (114), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 42/172 (24%), Positives = 79/172 (45%), Gaps = 12/172 (6%)

Query: 310 NLARSYHSKGDYEKAGLYYMASVKEINKPHEFI----FPYYGLGQVQLKLGDFRSALTNF 365
           N A +Y   G+  +     MA++    K  E        Y  L Q+   +G F  A++ +
Sbjct: 35  NCAIAYQLLGNIHEDYGQLMAAMSAYTKAFELAPNQAISYAYLAQIYRNMGWFDEAISFY 94

Query: 366 EKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDT 425
           ++ +++ P+  +    LG      G IE A     KA  ++P+  QA++D+G  L  ++ 
Sbjct: 95  QQAIDLSPNWADLHYHLGSALHWQGNIEGAIGCYEKAIALNPKLGQAYLDMGLRL--NER 152

Query: 426 GAALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDAL 475
           G       TA  +L++ G   P   E+ N +G +  ++ + + A   F++AL
Sbjct: 153 G----DIDTAIKVLQQGGINCPNFKEIFNTLGYLQLQQNQIDEAIAIFQEAL 200



 Score = 44.7 bits (104), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 44/171 (25%), Positives = 76/171 (44%), Gaps = 20/171 (11%)

Query: 254 MEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLAR 313
           M    +AFE+ P  A++  YLA  +   G         + A+ ++   P  +  +Y+L  
Sbjct: 57  MSAYTKAFELAPNQAISYAYLAQIYRNMGWFDEAISFYQQAIDLS---PNWADLHYHLGS 113

Query: 314 SYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLG---DFRSALTNFEKVLE 370
           + H +G+ E A   Y  ++    K          LGQ  L +G   + R  +    KVL+
Sbjct: 114 ALHWQGNIEGAIGCYEKAIALNPK----------LGQAYLDMGLRLNERGDIDTAIKVLQ 163

Query: 371 IYPDNC----ETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 417
               NC    E    LG++ +Q  QI++A  + ++A  IDP +   + +LG
Sbjct: 164 QGGINCPNFKEIFNTLGYLQLQQNQIDEAIAIFQEALNIDPTEPLVYNNLG 214


>gi|328699992|ref|XP_003241117.1| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit-like
           isoform 2 [Acyrthosiphon pisum]
 gi|328699994|ref|XP_003241118.1| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit-like
           isoform 3 [Acyrthosiphon pisum]
 gi|328699996|ref|XP_003241119.1| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit-like
           isoform 4 [Acyrthosiphon pisum]
 gi|328699998|ref|XP_001952129.2| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit-like
           isoform 1 [Acyrthosiphon pisum]
          Length = 1108

 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 74/308 (24%), Positives = 130/308 (42%), Gaps = 32/308 (10%)

Query: 135 GQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS 194
           G+LLL    +++A   FKI      +    L   A V +  G++  ++  YK+AL+++P 
Sbjct: 228 GKLLLKLNRIKEAKKHFKIANNCATECPDTLKNLADVYYLIGKFEKAISKYKKALEINPD 287

Query: 195 CPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVM-DLQANEAAGI--- 250
              A    +G+   K+ +   A   F +AL+L+PENV  L +LAV    Q N    +   
Sbjct: 288 LINA-YFYLGMAHLKVTEFQNAANIFLKALELEPENVSVLRSLAVTYCFQENMLLCVEVY 346

Query: 251 RKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYN 310
           +K ++    AF +     +AL YL N   +      +++  +         P +   + N
Sbjct: 347 KKCLKLQPEAFNL--NLELALIYLHNLQNYQEAVIYLKKCIQL-------NPNRIDLFKN 397

Query: 311 LARSYHSKGDYEKA-------GLYYMASVKEINKPHEFI----------FPYYGLGQVQL 353
           L  +Y    D+  A       G  Y+ S  + N  + F           F ++ +G    
Sbjct: 398 LFVAYRKSNDHLNASDACMSIGDLYLESDDQENARNAFFCAILLNPRNAFGHWKVGLTMY 457

Query: 354 KLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKI-DPRDAQA 412
            LG    ALT ++  +E+ P        +  IY + G  EKA +  + A ++  P    A
Sbjct: 458 NLGHLDLALTRYKHAIELKPTLANAYCDIAIIYEEYGISEKAIDYYKMAIQLQQPTHYNA 517

Query: 413 FIDLGELL 420
            ++L  +L
Sbjct: 518 CLNLANIL 525



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 91/377 (24%), Positives = 157/377 (41%), Gaps = 47/377 (12%)

Query: 87  NALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQ 146
           N   VYY  +GK E            A   Y KA  I+    + +   G   L   E + 
Sbjct: 260 NLADVYYL-IGKFEK-----------AISKYKKALEINPDLINAYFYLGMAHLKVTEFQN 307

Query: 147 ASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLC 206
           A++ F   LE + +NV  L   A     +      +E YK+ L++ P    A  L + L 
Sbjct: 308 AANIFLKALELEPENVSVLRSLAVTYCFQENMLLCVEVYKKCLKLQPE---AFNLNLELA 364

Query: 207 RYKLGQLGKARQA---FQRALQLDPENVEALVALAVMDLQANE-----AAGIRKG----- 253
              L  L   ++A    ++ +QL+P  ++    L V   ++N+      A +  G     
Sbjct: 365 LIYLHNLQNYQEAVIYLKKCIQLNPNRIDLFKNLFVAYRKSNDHLNASDACMSIGDLYLE 424

Query: 254 ---MEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG------PTK 304
               E  + AF    +CA+ LN   N F        +  L    LA+T +       PT 
Sbjct: 425 SDDQENARNAF----FCAILLN-PRNAFGHWKVGLTMYNLGHLDLALTRYKHAIELKPTL 479

Query: 305 SHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLG-DFRSALT 363
           +++Y ++A  Y   G  EKA  YY  ++ ++ +P  +      L  +  +L  +   ALT
Sbjct: 480 ANAYCDIAIIYEEYGISEKAIDYYKMAI-QLQQPTHY-NACLNLANILYRLNINLNDALT 537

Query: 364 NFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISS 423
           ++EK LE    + +    +G+IY +L + + A      A + DP   +A++ +G   I  
Sbjct: 538 HYEKALEYDNTSVDVYIHMGNIYTELNRSKDALRCFYMAIQHDPHCLEAYMYIGS--IQK 595

Query: 424 DTGAALDAFKTARTLLK 440
           D+   ++A +    +LK
Sbjct: 596 DSDNFIEAIRAYEFVLK 612



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 66/294 (22%), Positives = 120/294 (40%), Gaps = 33/294 (11%)

Query: 173 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 232
           FN G Y   ++  + A  ++P+C   +     L   K  +   A++   +   + P  V+
Sbjct: 130 FNCGNYEKCIDCLEIANNINPNCSEVLS-NFALVYMKKSENDLAKEYLFKVCTIKPFCVD 188

Query: 233 ALVALAVMDLQANEAAGIRKGMEK-------MQRAFEIYPYCAMALNYLANHFFFTGQHF 285
           A    A    + N+        E+       + +    Y    + LN +        +HF
Sbjct: 189 AWTDYADFLFKTNDLITAELAYERVLSLKPELYKVHNKYGKLLLKLNRIKE----AKKHF 244

Query: 286 LVEQLTETALAVTNHGPTKS-HSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFP 344
                      + N+  T+   +  NLA  Y+  G +EKA   Y  ++ EIN   + I  
Sbjct: 245 ----------KIANNCATECPDTLKNLADVYYLIGKFEKAISKYKKAL-EINP--DLINA 291

Query: 345 YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAK 404
           Y+ LG   LK+ +F++A   F K LE+ P+N   L++L   Y     +    E+ +K  K
Sbjct: 292 YFYLGMAHLKVTEFQNAANIFLKALELEPENVSVLRSLAVTYCFQENMLLCVEVYKKCLK 351

Query: 405 IDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIGV 456
           + P      ++L  + + +     L  ++ A   LKK  +  P  I++  N+ V
Sbjct: 352 LQPEAFNLNLELALIYLHN-----LQNYQEAVIYLKKCIQLNPNRIDLFKNLFV 400


>gi|340623750|ref|YP_004742203.1| hypothetical protein GYY_02905 [Methanococcus maripaludis X1]
 gi|339904018|gb|AEK19460.1| hypothetical protein GYY_02905 [Methanococcus maripaludis X1]
          Length = 409

 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 79/313 (25%), Positives = 129/313 (41%), Gaps = 16/313 (5%)

Query: 96  LGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVL 155
           LGKI   Q E ++    A  YYNK   ID     TW  KG  L   G  +++  AF    
Sbjct: 98  LGKIHLSQEEYDK----ALYYYNKLLEIDNSVGKTWFYKGICLKMLGNYDESVEAFDKS- 152

Query: 156 EADRDNVPALLGQ-ACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLG 214
             D + +  +        +  G Y  + E + +AL +  +   ++  G GLC  K  Q  
Sbjct: 153 TGDYETLVLIWNDLGYCYYQNGEYDKATECFDKALTLDGNLKYSLN-GKGLCYEKKEQYT 211

Query: 215 KARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYL 274
            A + F +A+  D    +A+    +   ++ + +      EK        PYC     Y 
Sbjct: 212 MAIECFDKAVCQDECYYDAIYNKGISCYKSKKYSCAISCFEKALDLNNSNPYCYF---YK 268

Query: 275 ANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKE 334
           AN     G++       + A+ + +  P     +  L  SY+   +Y  +   Y  +V E
Sbjct: 269 ANSLKSLGEYEKAVLNYKKAIELDSKNPV---FWSGLGLSYNYLNEYNSSIQSYEKAV-E 324

Query: 335 INKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK 394
           +N P + I  +  LG +  K   +  ++  FEK L++  +N      LG+ Y+ L   EK
Sbjct: 325 LN-PKDDI-SWSNLGYLHYKTKKYNESIFCFEKALDLNSNNKYAWNGLGNSYLLLKNYEK 382

Query: 395 AQELLRKAAKIDP 407
           A     KA +IDP
Sbjct: 383 ALMCYEKAIEIDP 395



 Score = 42.7 bits (99), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 32/130 (24%), Positives = 65/130 (50%), Gaps = 8/130 (6%)

Query: 348 LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 407
           LG+  ++  +   A   F +++E+ P+N   LK+LG I++   + +KA     K  +ID 
Sbjct: 64  LGKYSMENRNLDMAEIYFGRLIELEPENKCALKSLGKIHLSQEEYDKALYYYNKLLEIDN 123

Query: 408 RDAQAFIDLGELL-ISSDTGAALDAFKTARTLLKKAGE-EVPIEVLNNIGVIHFEKGEFE 465
              + +   G  L +  +   +++AF       K  G+ E  + + N++G  +++ GE++
Sbjct: 124 SVGKTWFYKGICLKMLGNYDESVEAFD------KSTGDYETLVLIWNDLGYCYYQNGEYD 177

Query: 466 SAHQSFKDAL 475
            A + F  AL
Sbjct: 178 KATECFDKAL 187


>gi|427722550|ref|YP_007069827.1| hypothetical protein Lepto7376_0567 [Leptolyngbya sp. PCC 7376]
 gi|427354270|gb|AFY36993.1| Tetratricopeptide TPR_1 repeat-containing protein [Leptolyngbya sp.
           PCC 7376]
          Length = 493

 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 77/338 (22%), Positives = 142/338 (42%), Gaps = 29/338 (8%)

Query: 117 YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 176
           YN A  +       W  +G  L   G+ E+A  ++   L+ + D+  +   +  +     
Sbjct: 93  YNHAVELRADSVPAWNNRGNTLKVLGKYEEAIDSYDQALKLEPDDYLSWDNKGDLLKELK 152

Query: 177 RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVA 236
           +Y ++++ Y +AL + P+    I    GL    L Q   A   + +AL+++  +   L A
Sbjct: 153 QYHEAIQSYSKALVIKPN-SAEIWYKRGLVFELLSQDNDALMNYSKALEINQNSPHILCA 211

Query: 237 LAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALA 296
              + ++       ++ +    RA E+   C  A         ++ + FL+EQL +   A
Sbjct: 212 RGSILVRLER---FQEALMCFNRAIELKADCVEA---------WSHKGFLLEQLKKIEDA 259

Query: 297 VTNHG------PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGL-- 348
           + ++G      P +   +Y+    +  +  Y++ GL+    V  +N+ H     Y  L  
Sbjct: 260 IFSYGQALAVNPNQEILWYHRGNLFLRQKQYQR-GLHSYDEVLRLNREH-----YQSLNN 313

Query: 349 -GQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 407
            G    KLGD   A   F+KVLEI P         G I   +G  ++A     KA K++P
Sbjct: 314 KGVSLYKLGDVHGAFKCFQKVLEINPYAFSAWNNQGQICKAIGDYQEAIICYDKALKVEP 373

Query: 408 RDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGE 444
           + ++ +   G  L        A+++F+ A  L K   E
Sbjct: 374 KQSKIWSKRGLCLAKLGHYEEAINSFQQAIQLDKSYAE 411



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 54/180 (30%), Positives = 82/180 (45%), Gaps = 9/180 (5%)

Query: 117 YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 176
           Y++  R++     +   KG  L   G+V  A   F+ VLE +     A   Q  +    G
Sbjct: 297 YDEVLRLNREHYQSLNNKGVSLYKLGDVHGAFKCFQKVLEINPYAFSAWNNQGQICKAIG 356

Query: 177 RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVA 236
            Y +++  Y +AL+V P     I    GLC  KLG   +A  +FQ+A+QLD    EAL A
Sbjct: 357 DYQEAIICYDKALKVEPK-QSKIWSKRGLCLAKLGHYEEAINSFQQAIQLDKSYAEALYA 415

Query: 237 -LAVMDLQANEAAGIRKGMEKMQRAFEIYP-YCAMALNYLANHFFFTGQHFLVEQLTETA 294
             AV  +Q N    ++  +E + +A    P Y  +A   L  +F    +H+  E L  T 
Sbjct: 416 QAAVFAVQQN----LQLALEYLGKAISANPKYIQVA--QLDRNFECLREHYHFEALINTT 469


>gi|414075408|ref|YP_006994726.1| TPR repeat domain-containing protein [Anabaena sp. 90]
 gi|413968824|gb|AFW92913.1| TPR repeat domain-containing protein [Anabaena sp. 90]
          Length = 755

 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 97/423 (22%), Positives = 178/423 (42%), Gaps = 56/423 (13%)

Query: 90  GVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASS 149
           G  Y  LG    +Q +  E    A   + KA +++ ++   +VG G +L A+G+ ++A +
Sbjct: 64  GKAYNNLGNALRRQGKLPE----ALTAHQKALQLNPNDAEAYVGIGNVLNAQGKPDEAVA 119

Query: 150 AFKIVLEADRDNVPAL--LGQACVEFNR-----GRYSDSLEF------------------ 184
           A++  +E D     A   LG A  +  +       Y  ++EF                  
Sbjct: 120 AYRKAIEFDPKYAKAYNSLGNALYDQEKLKEAVAAYRKAIEFDHKYAAAYYNLGNVLYEQ 179

Query: 185 ---------YKRALQVHPSCPGAI-RLGIGLCRYKLGQLGKARQAFQRALQLDPENVEAL 234
                    Y++A++++P    A   LG  L   K  +L +A  A+Q A++L+P++  A 
Sbjct: 180 KELDEAVAAYRKAIELNPKYATAYNNLGNALSDQK--KLDEAVAAYQEAIKLNPKDATAY 237

Query: 235 VALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETA 294
             L +     ++   + + +   Q+A E+ P  A A   L N    + Q  L E +    
Sbjct: 238 NNLGIA---LSDQKKLDEAVAAYQKAIELDPKYATAYYNLGNA--LSDQKKLDEAVAAYQ 292

Query: 295 LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLK 354
            A+    P  + +YYNL  +   +   ++A   Y    K I    ++   YY LG     
Sbjct: 293 KAIE-LDPKYATAYYNLGNALSDQKKLDEAVAAYQ---KAIELDPKYATAYYNLGNALRG 348

Query: 355 LGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFI 414
                 A+  ++K +E+ P        LG       ++++A    +KA +++P+DA A+ 
Sbjct: 349 QKKLDEAVAAYQKAIELNPKYATAYNNLGIALSDQKKLDEAVAAYQKAIELNPKDATAYY 408

Query: 415 DLGELLISSDT-GAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKD 473
           +LG  L        A+ A++ A  L  K        V NN+G    ++ + + A  ++K 
Sbjct: 409 NLGIALSDQKKLDEAVAAYQKAIELDPKDA-----AVYNNLGNALSDQKKLKEAISNYKT 463

Query: 474 ALG 476
           AL 
Sbjct: 464 ALS 466



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 63/260 (24%), Positives = 107/260 (41%), Gaps = 46/260 (17%)

Query: 159 RDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQ 218
           ++ V  L  Q     + G  S +   +++ LQV P+  G     +G    + G+L +A  
Sbjct: 27  QNTVQQLFKQGETAESVGDNSQAETIWRKVLQVEPNN-GKAYNNLGNALRRQGKLPEALT 85

Query: 219 AFQRALQLDPENVEALVALA-VMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANH 277
           A Q+ALQL+P + EA V +  V++ Q        + +   ++A E  P  A A N L N 
Sbjct: 86  AHQKALQLNPNDAEAYVGIGNVLNAQGKP----DEAVAAYRKAIEFDPKYAKAYNSLGNA 141

Query: 278 FFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINK 337
            +        E+L E   A                        Y KA          I  
Sbjct: 142 LYDQ------EKLKEAVAA------------------------YRKA----------IEF 161

Query: 338 PHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQE 397
            H++   YY LG V  +  +   A+  + K +E+ P        LG+      ++++A  
Sbjct: 162 DHKYAAAYYNLGNVLYEQKELDEAVAAYRKAIELNPKYATAYNNLGNALSDQKKLDEAVA 221

Query: 398 LLRKAAKIDPRDAQAFIDLG 417
             ++A K++P+DA A+ +LG
Sbjct: 222 AYQEAIKLNPKDATAYNNLG 241



 Score = 45.1 bits (105), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 54/212 (25%), Positives = 103/212 (48%), Gaps = 22/212 (10%)

Query: 93  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 152
           Y  LG   + Q++ +E    A   Y KA  +D    + +   G  L  + ++++A +A++
Sbjct: 271 YYNLGNALSDQKKLDE----AVAAYQKAIELDPKYATAYYNLGNALSDQKKLDEAVAAYQ 326

Query: 153 IVLEADRDNVPAL--LGQACVEFNRG--RYSDSLEFYKRALQVHPSCPGAIR-LGIGLCR 207
             +E D     A   LG A     RG  +  +++  Y++A++++P    A   LGI L  
Sbjct: 327 KAIELDPKYATAYYNLGNAL----RGQKKLDEAVAAYQKAIELNPKYATAYNNLGIALSD 382

Query: 208 YKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYC 267
            K  +L +A  A+Q+A++L+P++  A   L +     ++   + + +   Q+A E+ P  
Sbjct: 383 QK--KLDEAVAAYQKAIELNPKDATAYYNLGIA---LSDQKKLDEAVAAYQKAIELDPKD 437

Query: 268 AMALNYLANHFFFTGQHFLVEQLT--ETALAV 297
           A   N L N    + Q  L E ++  +TAL++
Sbjct: 438 AAVYNNLGNA--LSDQKKLKEAISNYKTALSL 467



 Score = 45.1 bits (105), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 22/72 (30%), Positives = 43/72 (59%)

Query: 349 GQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPR 408
           G+    +GD   A T + KVL++ P+N +    LG+   + G++ +A    +KA +++P 
Sbjct: 37  GETAESVGDNSQAETIWRKVLQVEPNNGKAYNNLGNALRRQGKLPEALTAHQKALQLNPN 96

Query: 409 DAQAFIDLGELL 420
           DA+A++ +G +L
Sbjct: 97  DAEAYVGIGNVL 108


>gi|254168890|ref|ZP_04875730.1| Tetratricopeptide repeat family [Aciduliprofundum boonei T469]
 gi|197622154|gb|EDY34729.1| Tetratricopeptide repeat family [Aciduliprofundum boonei T469]
          Length = 1297

 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 145/632 (22%), Positives = 259/632 (40%), Gaps = 76/632 (12%)

Query: 5   YIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLII--AREYFKQGKVEQ---- 58
           ++P    ++E+     Q  R  S   DILK E  P D+  ++  A+ Y + GK+E     
Sbjct: 380 HLPTLKLQKEIMKKKGQWERVISICEDILKIE--PNDIGSLVDEAKAYREVGKLESALNF 437

Query: 59  -FRQILEEGSSPEIDEYYADVRYERIA---ILNALGVYYTYLGKIETKQREKEEHFILAT 114
             R    E S+ E+ +   D+  +      I+NA     +  G  ET       ++I++ 
Sbjct: 438 AIRATEIEPSNIELWKLRKDIAKDLNKPQEIINAGTQIISMEGDFETYLDLARAYYIVSR 497

Query: 115 QYYNKASR-----IDMHEPST--WVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLG 167
             Y+ A +     + + E S   W   G +    G++E A  +F+     + +N      
Sbjct: 498 --YDDAKKTLERGLKLKEDSDEGWNLLGMIYYKLGDLENARYSFEKASTINPNNKKYWKN 555

Query: 168 QACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGI--GLCRYKLGQLGKARQAFQRALQ 225
            A V    G+Y++++E+Y++AL++ P+    +RL    G+C  K+ +  +A ++F  AL+
Sbjct: 556 LAWVMEKLGKYNEAVEYYEKALELDPN---DMRLWYEKGICLKKIKRYEEAIKSFDSALK 612

Query: 226 LDPENVEA-------LVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHF 278
           L+ E  +A       L+ L   D    EA  I   + K++R    Y Y    L +    +
Sbjct: 613 LNSEFTKALYEKGDSLIKLGNYD----EALKIFTSLIKLERGNSEYIYKRAYLRFKKREY 668

Query: 279 FFTGQHFLVEQLTETALAVTNHGPT--KSHSYYNLARSYHSK-GDYEKAGLYYMASVKEI 335
                        E AL   N      +   +  L +    +  DYE   +     +  I
Sbjct: 669 -------------EAALKDLNLALNYERKEKFLVLKKDVCKELKDYE-CVIETSKEILTI 714

Query: 336 NKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKA 395
           NK +  I  +  L      +G   SA+  +   LEI+PDN   L  L    ++  +   A
Sbjct: 715 NKKN--ISAWRDLAVAYDSMGKVDSAIATYRDALEIFPDNDVLLYELKATLLKHNRFADA 772

Query: 396 QELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGE-EVPIEVLNNI 454
            ++ +K   I P D     DL   LI       L  ++ A+  L +A E     E+L  +
Sbjct: 773 IDVCKKILSIAPEDYDNLRDLSSALIK------LKKYEDAKEYLLRALELNKNAELLELL 826

Query: 455 GVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTY--------VIDASASMLQFKDMQ 506
           G  ++    + SA + +KDAL       +     K Y         I A    +++K   
Sbjct: 827 GDTYYYLKNYTSAIEHYKDALNLNASPHIYHKLAKGYYKVGDLQEAIKAIERAIEWKKDA 886

Query: 507 LFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLA 566
            F+     G+ + L    +   +N A    ++ D+  A +    I+F+   Y D    L 
Sbjct: 887 KFYLL---GSRIYLKMGDLNSAYNYANKAFELEDSDDARINLASIMFELGKYDDVIALLK 943

Query: 567 AIAKARNNLQLSIELVNEALKVNGKYPNALSM 598
            + K  NNL  ++ L+ +AL+   +Y +A+ +
Sbjct: 944 PLGK-NNNLD-ALRLLGKALEAEERYEDAVKI 973



 Score = 56.2 bits (134), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 81/372 (21%), Positives = 143/372 (38%), Gaps = 89/372 (23%)

Query: 119 KASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRY 178
           KA +ID ++  +W+  G L   +GE E+A   FK  ++ D ++  +   +A V     R 
Sbjct: 236 KAIKIDPNDKKSWINLGILYKKRGEYEEALKCFKEAIKIDPNDKKSWYLEASVLHILERD 295

Query: 179 SDSLEFYKRALQVHP------------------------SCPGAIRLG---------IGL 205
           S++L+   RAL++                          +C G + +G         + L
Sbjct: 296 SEALKSINRALELDKKYESALLLKRDVAKKLKVYDELAAACVGLLDVGYEDTELMYDLAL 355

Query: 206 CRYKLGQLGKA---------------------------RQAFQRA-------LQLDPENV 231
             Y  G+L KA                           +  ++R        L+++P ++
Sbjct: 356 SYYHTGELEKAYNITLDILKSLPRHLPTLKLQKEIMKKKGQWERVISICEDILKIEPNDI 415

Query: 232 EALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLT 291
            +LV  A       E   +   +    RA EI P         +N   +  +  + + L 
Sbjct: 416 GSLVDEAK---AYREVGKLESALNFAIRATEIEP---------SNIELWKLRKDIAKDLN 463

Query: 292 ETALAVTNHGPT------KSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 345
           +    + N G           +Y +LAR+Y+    Y+ A       +K      E    +
Sbjct: 464 KPQ-EIINAGTQIISMEGDFETYLDLARAYYIVSRYDDAKKTLERGLKLKEDSDE---GW 519

Query: 346 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKI 405
             LG +  KLGD  +A  +FEK   I P+N +  K L  +  +LG+  +A E   KA ++
Sbjct: 520 NLLGMIYYKLGDLENARYSFEKASTINPNNKKYWKNLAWVMEKLGKYNEAVEYYEKALEL 579

Query: 406 DPRDAQAFIDLG 417
           DP D + + + G
Sbjct: 580 DPNDMRLWYEKG 591



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 86/441 (19%), Positives = 176/441 (39%), Gaps = 103/441 (23%)

Query: 119 KASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK-------------------------- 152
           KA +ID      W  K ++   KG++++A   +K                          
Sbjct: 120 KALQIDRRSKEVWGTKAEIYQLKGDIDEALDVYKKLIKMYPDEIKYYDKYLEYRPKDLEI 179

Query: 153 ------------------------IVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRA 188
                                   + + A+       LG A    +R R  +++   K+A
Sbjct: 180 LFKKGVQLYKIQSYAECVKIMKKVVSINAEHQEAWVYLGAAYANIDRMR--EAINALKKA 237

Query: 189 LQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPEN-----VEALVALAVMDLQ 243
           +++ P+   +  + +G+   K G+  +A + F+ A+++DP +     +EA V L +++  
Sbjct: 238 IKIDPNDKKSW-INLGILYKKRGEYEEALKCFKEAIKIDPNDKKSWYLEASV-LHILERD 295

Query: 244 ANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPT 303
           +     I + +E + + +E     A+ L           +  + ++L    + + + G  
Sbjct: 296 SEALKSINRALE-LDKKYE----SALLL-----KRDVAKKLKVYDELAAACVGLLDVGYE 345

Query: 304 KSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGL-GQVQLKLGDFRSAL 362
            +   Y+LA SY+  G+ EKA    +  +K +  P     P   L  ++  K G +   +
Sbjct: 346 DTELMYDLALSYYHTGELEKAYNITLDILKSL--PRH--LPTLKLQKEIMKKKGQWERVI 401

Query: 363 TNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRD------------- 409
           +  E +L+I P++  +L      Y ++G++E A     +A +I+P +             
Sbjct: 402 SICEDILKIEPNDIGSLVDEAKAYREVGKLESALNFAIRATEIEPSNIELWKLRKDIAKD 461

Query: 410 ---AQAFIDLGELLIS--SDTGAALDA---------FKTARTLLKKA--GEEVPIEVLNN 453
               Q  I+ G  +IS   D    LD          +  A+  L++    +E   E  N 
Sbjct: 462 LNKPQEIINAGTQIISMEGDFETYLDLARAYYIVSRYDDAKKTLERGLKLKEDSDEGWNL 521

Query: 454 IGVIHFEKGEFESAHQSFKDA 474
           +G+I+++ G+ E+A  SF+ A
Sbjct: 522 LGMIYYKLGDLENARYSFEKA 542



 Score = 47.8 bits (112), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 64/261 (24%), Positives = 112/261 (42%), Gaps = 26/261 (9%)

Query: 197 GAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEK 256
            A+ +  G+   K+G +  A +A++ A +LDP NV A    A++     E    +K    
Sbjct: 61  SALLVNTGMALQKVGAIKDALEAYKLAKKLDPSNVSAYTNYAMLLALQKE---YKKAAYI 117

Query: 257 MQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYH 316
           +++A +I           A  +   G    +++  +    +    P +   YY+    Y 
Sbjct: 118 IEKALQIDRRSKEVWGTKAEIYQLKGD---IDEALDVYKKLIKMYPDEIK-YYDKYLEYR 173

Query: 317 SKGDYE---KAG--LY----------YMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSA 361
            K D E   K G  LY           M  V  IN  H+  + Y  LG     +   R A
Sbjct: 174 PK-DLEILFKKGVQLYKIQSYAECVKIMKKVVSINAEHQEAWVY--LGAAYANIDRMREA 230

Query: 362 LTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQA-FIDLGELL 420
           +   +K ++I P++ ++   LG +Y + G+ E+A +  ++A KIDP D ++ +++   L 
Sbjct: 231 INALKKAIKIDPNDKKSWINLGILYKKRGEYEEALKCFKEAIKIDPNDKKSWYLEASVLH 290

Query: 421 ISSDTGAALDAFKTARTLLKK 441
           I      AL +   A  L KK
Sbjct: 291 ILERDSEALKSINRALELDKK 311



 Score = 42.7 bits (99), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 59/240 (24%), Positives = 103/240 (42%), Gaps = 23/240 (9%)

Query: 178  YSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPEN----VEA 233
            Y+ ++E YK AL ++ S     +L  G   YK+G L +A +A +RA++   +     + +
Sbjct: 836  YTSAIEHYKDALNLNASPHIYHKLAKGY--YKVGDLQEAIKAIERAIEWKKDAKFYLLGS 893

Query: 234  LVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTET 293
             + L + DL +              +AFE+       +N LA+  F  G++  V  L + 
Sbjct: 894  RIYLKMGDLNS--------AYNYANKAFELEDSDDARIN-LASIMFELGKYDDVIALLKP 944

Query: 294  ALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQL 353
                 N    +      L ++  ++  YE A   Y   V +I+K  +    +  LG+  L
Sbjct: 945  LGKNNNLDALRL-----LGKALEAEERYEDAVKIYNKVV-DIDKKDKS--SWISLGRCYL 996

Query: 354  KLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAF 413
             L  +  A+  FE+   I P +      L   Y   G + KA   + KA ++DP DA  +
Sbjct: 997  TLNKYNEAIKAFERASLIDPKDKAVYTFLSFAYEGAGDLNKALNYVEKALELDPEDAHIW 1056


>gi|449664350|ref|XP_002161502.2| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit-like
           [Hydra magnipapillata]
          Length = 538

 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 74/307 (24%), Positives = 136/307 (44%), Gaps = 14/307 (4%)

Query: 135 GQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPS 194
           G LL A G +E+A + +   +E   +   A     CV   +     ++  +++A+Q+ P+
Sbjct: 159 GNLLKALGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQSEIWLAIHHFEKAVQIDPN 218

Query: 195 CPGA-IRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKG 253
              A I LG  L   ++    +A  A+ RAL ++P +      LA +     E   I   
Sbjct: 219 FLDAYINLGNVLKEARI--FDRAVTAYLRALTINPNHAIVHGNLACVYY---EQGLIDLA 273

Query: 254 MEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLAR 313
           ++  +RA E+ P    A   LAN     G+    E   +TAL +    PT + S  NLA 
Sbjct: 274 VDTYKRAIELQPNFPDAYCNLANALKEQGKVEDAEDCYDTALQLC---PTHADSLNNLAN 330

Query: 314 SYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYP 373
               +G  E +   Y  +++      EF   +  L  +  + G    AL ++++ + I+P
Sbjct: 331 IKREQGLIEDSIRLYCKALEVFP---EFAAAHSNLASILQQQGKLHEALIHYKEAIRIHP 387

Query: 374 DNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFK 433
              +    +G+   ++  +E A +   +A +I+P  A A  +L    +  D+G   +A +
Sbjct: 388 TFADAYSNMGNALKEMQDVEGAIQCYSRAIQINPAFADAHSNLAS--VYKDSGNIAEAIQ 445

Query: 434 TARTLLK 440
           + +T LK
Sbjct: 446 SYKTALK 452



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 72/296 (24%), Positives = 130/296 (43%), Gaps = 14/296 (4%)

Query: 89  LGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQAS 148
             V ++ LG +   Q E      LA  ++ KA +ID +    ++  G +L      ++A 
Sbjct: 185 FAVAWSNLGCVFNAQSE----IWLAIHHFEKAVQIDPNFLDAYINLGNVLKEARIFDRAV 240

Query: 149 SAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRY 208
           +A+   L  + ++       ACV + +G    +++ YKRA+++ P+ P A    +     
Sbjct: 241 TAYLRALTINPNHAIVHGNLACVYYEQGLIDLAVDTYKRAIELQPNFPDAY-CNLANALK 299

Query: 209 KLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCA 268
           + G++  A   +  ALQL P + ++L  LA +     E   I   +    +A E++P  A
Sbjct: 300 EQGKVEDAEDCYDTALQLCPTHADSLNNLANIK---REQGLIEDSIRLYCKALEVFPEFA 356

Query: 269 MALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYY 328
            A + LA+      Q  L E L     A+  H PT + +Y N+  +     D E A   Y
Sbjct: 357 AAHSNLAS--ILQQQGKLHEALIHYKEAIRIH-PTFADAYSNMGNALKEMQDVEGAIQCY 413

Query: 329 MASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGH 384
             ++ +IN    F   +  L  V    G+   A+ +++  L++ PD  +    L H
Sbjct: 414 SRAI-QINP--AFADAHSNLASVYKDSGNIAEAIQSYKTALKLKPDFPDAYCNLAH 466



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 63/292 (21%), Positives = 118/292 (40%), Gaps = 12/292 (4%)

Query: 130 TWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRAL 189
            W   G +  A+ E+  A   F+  ++ D + + A +    V      +  ++  Y RAL
Sbjct: 188 AWSNLGCVFNAQSEIWLAIHHFEKAVQIDPNFLDAYINLGNVLKEARIFDRAVTAYLRAL 247

Query: 190 QVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAG 249
            ++P+    +   +    Y+ G +  A   ++RA++L P   +A   LA       E   
Sbjct: 248 TINPN-HAIVHGNLACVYYEQGLIDLAVDTYKRAIELQPNFPDAYCNLANA---LKEQGK 303

Query: 250 IRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYY 309
           +    +    A ++ P  A +LN LAN      +  L+E             P  + ++ 
Sbjct: 304 VEDAEDCYDTALQLCPTHADSLNNLAN---IKREQGLIEDSIRLYCKALEVFPEFAAAHS 360

Query: 310 NLARSYHSKGDYEKAGLYYMASVKEINKPHE-FIFPYYGLGQVQLKLGDFRSALTNFEKV 368
           NLA     +G   +A ++Y    KE  + H  F   Y  +G    ++ D   A+  + + 
Sbjct: 361 NLASILQQQGKLHEALIHY----KEAIRIHPTFADAYSNMGNALKEMQDVEGAIQCYSRA 416

Query: 369 LEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 420
           ++I P   +    L  +Y   G I +A +  + A K+ P    A+ +L   L
Sbjct: 417 IQINPAFADAHSNLASVYKDSGNIAEAIQSYKTALKLKPDFPDAYCNLAHCL 468



 Score = 46.6 bits (109), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 41/144 (28%), Positives = 63/144 (43%), Gaps = 8/144 (5%)

Query: 278 FFFTGQHFLVEQLTETA----LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK 333
              +  HF   +L ++A    LA+    P  + +Y NL      KG  + A   Y  +VK
Sbjct: 54  LLLSSIHFQCRRLDQSAQFSSLAIK-QNPMLAEAYSNLGNVLKEKGQLKDALANYRHAVK 112

Query: 334 EINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIE 393
              KP +FI  Y  L    +  GD   A+  +   L   PD       LG++   LG++E
Sbjct: 113 L--KP-DFIDGYINLAAALVAAGDLEGAVQAYATALNYNPDLYCVRSDLGNLLKALGRLE 169

Query: 394 KAQELLRKAAKIDPRDAQAFIDLG 417
           +A+    KA +  P  A A+ +LG
Sbjct: 170 EAKACYLKAIETQPNFAVAWSNLG 193


>gi|189235894|ref|XP_967579.2| PREDICTED: similar to AGAP006254-PA [Tribolium castaneum]
          Length = 1086

 Score = 64.7 bits (156), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 87/386 (22%), Positives = 160/386 (41%), Gaps = 24/386 (6%)

Query: 93  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 152
           Y+ LG +  ++ + +E    A   Y  A R+       ++     L+A G++EQA  A+ 
Sbjct: 143 YSNLGNVYKERSQLQE----ALDNYRHAVRLKPDFIDGYINLAAALVAAGDMEQAVQAYI 198

Query: 153 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 210
             L+ + D   V + LG        GR  ++   Y +A++  P    A    +G      
Sbjct: 199 TALQYNPDLYCVRSDLGNLLKAL--GRLDEAKACYLKAIETRPDFAVAWS-NLGCVFNAQ 255

Query: 211 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 270
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 256 GEIWLAIHHFEKAVGLDPNFLDAYINLGNV---LKEARIFDRAVAAYLRALNLSPNNAVV 312

Query: 271 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 330
              LA  ++  G   L++   +T        P    +Y NLA +   KG   +A   Y  
Sbjct: 313 HGNLACVYYEQG---LIDLAIDTYRRAIELQPNFPDAYCNLANALKEKGQVAEAEECYNT 369

Query: 331 SVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLG 390
           +++      + +     L  ++ + G    A   + K LE++P+       L  +  Q G
Sbjct: 370 ALRLCPSHADSL---NNLANIKREQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQG 426

Query: 391 QIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGEEVPIE 449
           ++ +A    ++A +I P  A A+ ++G  L    D   AL  +  A  +          +
Sbjct: 427 KLNEALMHYKEAIRIQPTFADAYSNMGNTLKEMQDVSGALQCYTRAIQINPAFA-----D 481

Query: 450 VLNNIGVIHFEKGEFESAHQSFKDAL 475
             +N+  IH + G    A QS++ AL
Sbjct: 482 AHSNLASIHKDSGNIPEAIQSYRTAL 507



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 72/332 (21%), Positives = 134/332 (40%), Gaps = 48/332 (14%)

Query: 89  LGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQAS 148
             V ++ LG +   Q E      LA  ++ KA  +D +    ++  G +L      ++A 
Sbjct: 241 FAVAWSNLGCVFNAQGE----IWLAIHHFEKAVGLDPNFLDAYINLGNVLKEARIFDRAV 296

Query: 149 SAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRY 208
           +A+   L    +N       ACV + +G    +++ Y+RA+++ P+ P A    +     
Sbjct: 297 AAYLRALNLSPNNAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPNFPDAY-CNLANALK 355

Query: 209 KLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCA 268
           + GQ+ +A + +  AL+L P + ++L  LA +     E   I +      +A E++P  A
Sbjct: 356 EKGQVAEAEECYNTALRLCPSHADSLNNLANIK---REQGYIEEATRLYLKALEVFPEFA 412

Query: 269 MALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYY 328
            A                                   HS  NLA     +G   +A ++Y
Sbjct: 413 AA-----------------------------------HS--NLASVLQQQGKLNEALMHY 435

Query: 329 MASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQ 388
             +++   +P  F   Y  +G    ++ D   AL  + + ++I P   +    L  I+  
Sbjct: 436 KEAIRI--QP-TFADAYSNMGNTLKEMQDVSGALQCYTRAIQINPAFADAHSNLASIHKD 492

Query: 389 LGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 420
            G I +A +  R A K+ P    A+ +L   L
Sbjct: 493 SGNIPEAIQSYRTALKLKPDFPDAYCNLAHCL 524



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 101/474 (21%), Positives = 191/474 (40%), Gaps = 33/474 (6%)

Query: 142 GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 201
           G+ E A      +   D+ N   LL  + + F   R   S  F   A++ +P    A   
Sbjct: 86  GDYENAERHCMQLWRQDQTNTGVLLLLSSIHFQCRRLDKSAHFSTLAIKQNPLLAEAYS- 144

Query: 202 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 261
            +G    +  QL +A   ++ A++L P+ ++  + LA   + A +   + + ++    A 
Sbjct: 145 NLGNVYKERSQLQEALDNYRHAVRLKPDFIDGYINLAAALVAAGD---MEQAVQAYITAL 201

Query: 262 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 319
           +  P  YC  +   L N     G+   +++     L      P  + ++ NL   ++++G
Sbjct: 202 QYNPDLYCVRS--DLGNLLKALGR---LDEAKACYLKAIETRPDFAVAWSNLGCVFNAQG 256

Query: 320 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 379
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P+N    
Sbjct: 257 EIWLAIHHFE---KAVGLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALNLSPNNAVVH 313

Query: 380 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLL 439
             L  +Y + G I+ A +  R+A ++ P    A+ +L   L   + G   +A +   T L
Sbjct: 314 GNLACVYYEQGLIDLAIDTYRRAIELQPNFPDAYCNLANAL--KEKGQVAEAEECYNTAL 371

Query: 440 KKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASM 499
           +        + LNN+  I  E+G  E A + +  AL   ++     + +        AS+
Sbjct: 372 RLCPSHA--DSLNNLANIKREQGYIEEATRLYLKAL--EVFPEFAAAHSNL------ASV 421

Query: 500 LQFK---DMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQ 556
           LQ +   +  L H  E     + +         N+   L+++ D   A   Y   +    
Sbjct: 422 LQQQGKLNEALMHYKEA----IRIQPTFADAYSNMGNTLKEMQDVSGALQCYTRAIQINP 477

Query: 557 DYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWV 610
            + DA+  LA+I K   N+  +I+    ALK+   +P+A   L        DW 
Sbjct: 478 AFADAHSNLASIHKDSGNIPEAIQSYRTALKLKPDFPDAYCNLAHCLQIVCDWT 531


>gi|423065545|ref|ZP_17054335.1| tetratricopeptide TPR_2 repeat protein [Arthrospira platensis C1]
 gi|406712988|gb|EKD08163.1| tetratricopeptide TPR_2 repeat protein [Arthrospira platensis C1]
          Length = 917

 Score = 64.7 bits (156), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 61/273 (22%), Positives = 119/273 (43%), Gaps = 10/273 (3%)

Query: 142 GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 201
           G++  A SA+    E   +   +    A +  N G + +++ FY++A+ + P+    +  
Sbjct: 53  GQLMAAMSAYTKAFELAPNQAISYAYLAQIYRNMGWFDEAISFYQQAIDLSPNW-ADLHY 111

Query: 202 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 261
            +G   +  G +  A   +++A+ L+P+  +A +    M L+ NE   I   ++ +Q+  
Sbjct: 112 HLGSALHWQGNIEGAIGCYEKAIALNPKLGQAYLD---MGLRLNERGDIDTAIKVLQQGG 168

Query: 262 EIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDY 321
              P      N L    +   Q   +++         N  PT+   Y NL  ++  +G  
Sbjct: 169 INCPNFKEIFNTLG---YLQLQQNQIDEAIAIFQEALNIDPTEPLVYNNLGWAWTYQGKL 225

Query: 322 EKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKA 381
            +A   Y    K I+   +    Y  LG++  +  + R A++ F+K + I PDN      
Sbjct: 226 SEAIAAYQ---KAISLKPDLAIAYSNLGKLWQQKNNHRQAISYFQKAIAIEPDNIMFYSD 282

Query: 382 LGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFI 414
            G   + +G + +A    +KA  IDP+  Q +I
Sbjct: 283 CGSSCLIIGWLSQAMACFQKAIAIDPKFVQGYI 315



 Score = 48.5 bits (114), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 42/172 (24%), Positives = 79/172 (45%), Gaps = 12/172 (6%)

Query: 310 NLARSYHSKGDYEKAGLYYMASVKEINKPHEFI----FPYYGLGQVQLKLGDFRSALTNF 365
           N A +Y   G+  +     MA++    K  E        Y  L Q+   +G F  A++ +
Sbjct: 37  NCAIAYQLLGNIHEDYGQLMAAMSAYTKAFELAPNQAISYAYLAQIYRNMGWFDEAISFY 96

Query: 366 EKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDT 425
           ++ +++ P+  +    LG      G IE A     KA  ++P+  QA++D+G  L  ++ 
Sbjct: 97  QQAIDLSPNWADLHYHLGSALHWQGNIEGAIGCYEKAIALNPKLGQAYLDMGLRL--NER 154

Query: 426 GAALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDAL 475
           G       TA  +L++ G   P   E+ N +G +  ++ + + A   F++AL
Sbjct: 155 G----DIDTAIKVLQQGGINCPNFKEIFNTLGYLQLQQNQIDEAIAIFQEAL 202



 Score = 44.7 bits (104), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 44/171 (25%), Positives = 76/171 (44%), Gaps = 20/171 (11%)

Query: 254 MEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLAR 313
           M    +AFE+ P  A++  YLA  +   G         + A+ ++   P  +  +Y+L  
Sbjct: 59  MSAYTKAFELAPNQAISYAYLAQIYRNMGWFDEAISFYQQAIDLS---PNWADLHYHLGS 115

Query: 314 SYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLG---DFRSALTNFEKVLE 370
           + H +G+ E A   Y  ++    K          LGQ  L +G   + R  +    KVL+
Sbjct: 116 ALHWQGNIEGAIGCYEKAIALNPK----------LGQAYLDMGLRLNERGDIDTAIKVLQ 165

Query: 371 IYPDNC----ETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 417
               NC    E    LG++ +Q  QI++A  + ++A  IDP +   + +LG
Sbjct: 166 QGGINCPNFKEIFNTLGYLQLQQNQIDEAIAIFQEALNIDPTEPLVYNNLG 216


>gi|270004555|gb|EFA01003.1| hypothetical protein TcasGA2_TC003916 [Tribolium castaneum]
          Length = 1054

 Score = 64.7 bits (156), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 87/386 (22%), Positives = 160/386 (41%), Gaps = 24/386 (6%)

Query: 93  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 152
           Y+ LG +  ++ + +E    A   Y  A R+       ++     L+A G++EQA  A+ 
Sbjct: 111 YSNLGNVYKERSQLQE----ALDNYRHAVRLKPDFIDGYINLAAALVAAGDMEQAVQAYI 166

Query: 153 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 210
             L+ + D   V + LG        GR  ++   Y +A++  P    A    +G      
Sbjct: 167 TALQYNPDLYCVRSDLGNLLKAL--GRLDEAKACYLKAIETRPDFAVAWS-NLGCVFNAQ 223

Query: 211 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 270
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 224 GEIWLAIHHFEKAVGLDPNFLDAYINLGNV---LKEARIFDRAVAAYLRALNLSPNNAVV 280

Query: 271 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 330
              LA  ++  G   L++   +T        P    +Y NLA +   KG   +A   Y  
Sbjct: 281 HGNLACVYYEQG---LIDLAIDTYRRAIELQPNFPDAYCNLANALKEKGQVAEAEECYNT 337

Query: 331 SVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLG 390
           +++      + +     L  ++ + G    A   + K LE++P+       L  +  Q G
Sbjct: 338 ALRLCPSHADSL---NNLANIKREQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQG 394

Query: 391 QIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGEEVPIE 449
           ++ +A    ++A +I P  A A+ ++G  L    D   AL  +  A  +          +
Sbjct: 395 KLNEALMHYKEAIRIQPTFADAYSNMGNTLKEMQDVSGALQCYTRAIQI-----NPAFAD 449

Query: 450 VLNNIGVIHFEKGEFESAHQSFKDAL 475
             +N+  IH + G    A QS++ AL
Sbjct: 450 AHSNLASIHKDSGNIPEAIQSYRTAL 475



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 72/332 (21%), Positives = 134/332 (40%), Gaps = 48/332 (14%)

Query: 89  LGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQAS 148
             V ++ LG +   Q E      LA  ++ KA  +D +    ++  G +L      ++A 
Sbjct: 209 FAVAWSNLGCVFNAQGE----IWLAIHHFEKAVGLDPNFLDAYINLGNVLKEARIFDRAV 264

Query: 149 SAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRY 208
           +A+   L    +N       ACV + +G    +++ Y+RA+++ P+ P A    +     
Sbjct: 265 AAYLRALNLSPNNAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPNFPDAY-CNLANALK 323

Query: 209 KLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCA 268
           + GQ+ +A + +  AL+L P + ++L  LA +     E   I +      +A E++P  A
Sbjct: 324 EKGQVAEAEECYNTALRLCPSHADSLNNLANIK---REQGYIEEATRLYLKALEVFPEFA 380

Query: 269 MALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYY 328
            A                                   HS  NLA     +G   +A ++Y
Sbjct: 381 AA-----------------------------------HS--NLASVLQQQGKLNEALMHY 403

Query: 329 MASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQ 388
             +++   +P  F   Y  +G    ++ D   AL  + + ++I P   +    L  I+  
Sbjct: 404 KEAIRI--QP-TFADAYSNMGNTLKEMQDVSGALQCYTRAIQINPAFADAHSNLASIHKD 460

Query: 389 LGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 420
            G I +A +  R A K+ P    A+ +L   L
Sbjct: 461 SGNIPEAIQSYRTALKLKPDFPDAYCNLAHCL 492



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 101/474 (21%), Positives = 191/474 (40%), Gaps = 33/474 (6%)

Query: 142 GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 201
           G+ E A      +   D+ N   LL  + + F   R   S  F   A++ +P    A   
Sbjct: 54  GDYENAERHCMQLWRQDQTNTGVLLLLSSIHFQCRRLDKSAHFSTLAIKQNPLLAEAYS- 112

Query: 202 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 261
            +G    +  QL +A   ++ A++L P+ ++  + LA   + A +   + + ++    A 
Sbjct: 113 NLGNVYKERSQLQEALDNYRHAVRLKPDFIDGYINLAAALVAAGD---MEQAVQAYITAL 169

Query: 262 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 319
           +  P  YC  +   L N     G+   +++     L      P  + ++ NL   ++++G
Sbjct: 170 QYNPDLYCVRS--DLGNLLKALGR---LDEAKACYLKAIETRPDFAVAWSNLGCVFNAQG 224

Query: 320 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 379
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P+N    
Sbjct: 225 EIWLAIHHFE---KAVGLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALNLSPNNAVVH 281

Query: 380 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLL 439
             L  +Y + G I+ A +  R+A ++ P    A+ +L   L   + G   +A +   T L
Sbjct: 282 GNLACVYYEQGLIDLAIDTYRRAIELQPNFPDAYCNLANAL--KEKGQVAEAEECYNTAL 339

Query: 440 KKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASM 499
           +        + LNN+  I  E+G  E A + +  AL   ++     + +        AS+
Sbjct: 340 RLCPSHA--DSLNNLANIKREQGYIEEATRLYLKAL--EVFPEFAAAHSNL------ASV 389

Query: 500 LQFK---DMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQ 556
           LQ +   +  L H  E     + +         N+   L+++ D   A   Y   +    
Sbjct: 390 LQQQGKLNEALMHYKEA----IRIQPTFADAYSNMGNTLKEMQDVSGALQCYTRAIQINP 445

Query: 557 DYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWV 610
            + DA+  LA+I K   N+  +I+    ALK+   +P+A   L        DW 
Sbjct: 446 AFADAHSNLASIHKDSGNIPEAIQSYRTALKLKPDFPDAYCNLAHCLQIVCDWT 499


>gi|206890228|ref|YP_002249703.1| tetratricopeptide repeat domain protein [Thermodesulfovibrio
           yellowstonii DSM 11347]
 gi|206742166|gb|ACI21223.1| tetratricopeptide repeat domain protein [Thermodesulfovibrio
           yellowstonii DSM 11347]
          Length = 1056

 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 79/340 (23%), Positives = 149/340 (43%), Gaps = 33/340 (9%)

Query: 166 LGQACVEFNRGRYSDSLEFYKRALQVH-----PSCPGAIRLGIGLCRYKLGQLGKARQAF 220
           LG+A +    G+Y  +L  +  +L+++      +  GA    IGL   K+GQL KA   F
Sbjct: 152 LGKAALSL--GKYEKALSSFNESLKLYREKGDENSVGANLSLIGLVYSKMGQLKKALSYF 209

Query: 221 QRALQL-----DPENVEALVALAVMDL-----QANEAAGIRKGMEKMQRAFEIYPYCAMA 270
           + AL++     DPE   ++V   + D+     Q + A    +   ++Q+   +     + 
Sbjct: 210 EEALKIAKKHNDPEGT-SIVLREIADIYSDLYQRDRAISYYQEAIEIQKKNNLRKELGVT 268

Query: 271 LNYLANHFFFTGQHFLVEQLTETALAVT---NHGPTKSHSYYNLARSYHSKGDYEKAGLY 327
           LN L + +    Q+    Q  + AL +    N  PT +  + N+   Y   G  +KA +Y
Sbjct: 269 LNNLGSMYMDLAQYEKALQSYQEALKIAKEQNDLPTTATLFNNIGHVYAKFGRTDKAIMY 328

Query: 328 YMASV---KEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEI-----YPDNCET- 378
           Y  S+   K + +P   ++    +G    ++G +  AL   ++ LEI      P   ET 
Sbjct: 329 YQQSLELEKRLKRPASLVYVLNNIGMEYFRVGKYDDALKYLKEALEIDKKLNNPHLLETR 388

Query: 379 LKALGHIYVQLGQIEKAQELLRKAAKIDPR-DAQAFIDLGELLISSDTGAALDAFKTART 437
           L  +G +Y++ G+   A+++  +  K++ R      +  G + +   TG   +A K A  
Sbjct: 389 LNCIGAVYLKQGRYRDAEQIFLERKKLEDRIKPNRLLHAGLVEVYLKTGRYDEALKLANQ 448

Query: 438 LLK--KAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
           +    +  +   IE    +G+    KG  + A  +  +A+
Sbjct: 449 IPPSWQDSKNRHIEYYTQVGLALKGKGNLQEAAVNLMNAI 488


>gi|153207820|ref|ZP_01946420.1| tetratricopeptide repeat protein/methyltransferase [Coxiella
           burnetii 'MSU Goat Q177']
 gi|212218831|ref|YP_002305618.1| tetratricopeptide repeat family protein [Coxiella burnetii
           CbuK_Q154]
 gi|120576372|gb|EAX32996.1| tetratricopeptide repeat protein/methyltransferase [Coxiella
           burnetii 'MSU Goat Q177']
 gi|212013093|gb|ACJ20473.1| tetratricopeptide repeat family protein [Coxiella burnetii
           CbuK_Q154]
          Length = 561

 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 80/318 (25%), Positives = 140/318 (44%), Gaps = 29/318 (9%)

Query: 165 LLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRAL 224
           LL +A  +  +G   ++LE Y + L+  P    A+  G G+   +L +  +A     RAL
Sbjct: 5   LLERAIQQHQQGSLKNALENYHKVLEDDPKQTAALH-GAGIALSQLCRNDEALHYIDRAL 63

Query: 225 QLDPENVEALVALAVMDLQANEAAGIRKGMEKM---QRAFEIYPYCAMALNYLANHFFFT 281
            L+P+N          + + N  +   K +E      +A ++ P  A A N +AN FF  
Sbjct: 64  LLEPQNA------TFQNSRGNILSQHGKLVEATIAYDQAIQLQPDYATAYNNIANCFFRQ 117

Query: 282 GQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKE---INKP 338
            +    ++  + A+A+    P  +++++N AR      +Y +A    +A +K    ++  
Sbjct: 118 KKFDNAKKAYQKAIALK---PHFANAHFNYARLLIELENYHQA----IAELKRTVAMSSH 170

Query: 339 HEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQEL 398
           H   F    L  V + LGDF  A+T +EK L + P+N +     G  +++  Q +KA + 
Sbjct: 171 HSAAFS--QLAHVYMYLGDFSKAITYYEKRLALEPENADAQYDCGLAHLKDNQFQKAIDY 228

Query: 399 LRKAAKIDPRDAQAFIDLGE-LLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVI 457
              A  ++P        L    L   D   AL  +      L++  ++  IE   N+GV+
Sbjct: 229 FTNALLLNPEHPDCHYSLATAYLQRGDHKEALIHY------LRQLEKKPQIECYYNVGVL 282

Query: 458 HFEKGEFESAHQSFKDAL 475
           H  +     A   FK AL
Sbjct: 283 HMYQERHREAIDYFKQAL 300



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 77/301 (25%), Positives = 127/301 (42%), Gaps = 16/301 (5%)

Query: 141 KGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIR 200
           +G ++ A   +  VLE D     AL G         R  ++L +  RAL + P      +
Sbjct: 15  QGSLKNALENYHKVLEDDPKQTAALHGAGIALSQLCRNDEALHYIDRALLLEPQ-NATFQ 73

Query: 201 LGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRA 260
              G    + G+L +A  A+ +A+QL P+   A   +A    +  +    +K     Q+A
Sbjct: 74  NSRGNILSQHGKLVEATIAYDQAIQLQPDYATAYNNIANCFFRQKKFDNAKKA---YQKA 130

Query: 261 FEIYPYCAMA-LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 319
             + P+ A A  NY          H  + +L  T    ++H    S ++  LA  Y   G
Sbjct: 131 IALKPHFANAHFNYARLLIELENYHQAIAELKRTVAMSSHH----SAAFSQLAHVYMYLG 186

Query: 320 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 379
           D+ KA  YY    K +    E     Y  G   LK   F+ A+  F   L + P++ +  
Sbjct: 187 DFSKAITYYE---KRLALEPENADAQYDCGLAHLKDNQFQKAIDYFTNALLLNPEHPDCH 243

Query: 380 KALGHIYVQLGQIEKAQ-ELLRKAAKIDPRDAQAFIDLGELLISSDTG-AALDAFKTART 437
            +L   Y+Q G  ++A    LR+  K  P+  + + ++G L +  +    A+D FK A T
Sbjct: 244 YSLATAYLQRGDHKEALIHYLRQLEK-KPQ-IECYYNVGVLHMYQERHREAIDYFKQALT 301

Query: 438 L 438
           L
Sbjct: 302 L 302


>gi|407465167|ref|YP_006776049.1| hypothetical protein NSED_06535 [Candidatus Nitrosopumilus sp. AR2]
 gi|407048355|gb|AFS83107.1| hypothetical protein NSED_06535 [Candidatus Nitrosopumilus sp. AR2]
          Length = 364

 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 63/123 (51%), Gaps = 1/123 (0%)

Query: 112 LATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACV 171
           L+   Y+K   ID+       GKGQ+ L   + EQ+ SAF    E + DN   LLG A +
Sbjct: 169 LSLILYDKVLEIDLDNIDALNGKGQVFLELNQYEQSRSAFLAAQEVEPDNTITLLGLAEL 228

Query: 172 EFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENV 231
            F   +   S + Y++ L + P    A+ +G      +LG+  +A + F  AL++DP N+
Sbjct: 229 NFLEEKNIKSQKIYEKILSIDPDNIQAL-IGEASVLIELGRFDEALEYFDEALEIDPYNL 287

Query: 232 EAL 234
           +AL
Sbjct: 288 DAL 290



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 66/265 (24%), Positives = 122/265 (46%), Gaps = 20/265 (7%)

Query: 154 VLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQL 213
           +LE++ DNV AL  +  +   +G+Y  +L+ +++A    P    +I  GIG   Y L + 
Sbjct: 41  ILESEPDNVTALNKKGSILLTQGKYVTALQNFEKAFTADPKNFDSIN-GIGYSYYYLDRY 99

Query: 214 GKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNY 273
             A + F+  L+ D  N+ AL+    + L+  +       +       +I P    ALN 
Sbjct: 100 DDAIKQFESVLKKDNRNIGALLGSGNVLLKIEQY---DDAILFFNIVLKIDPNNIDALNG 156

Query: 274 LANHFFFTGQH----FLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYM 329
            AN      Q+     L +++ E  L   +    K   +  L +       YE++   ++
Sbjct: 157 NANALLAVNQYKLSLILYDKVLEIDLDNIDALNGKGQVFLELNQ-------YEQSRSAFL 209

Query: 330 ASVKEINKPHEFIFPYYGLGQVQ-LKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQ 388
           A+ +E+ +P   I    GL ++  L+  + +S    +EK+L I PDN + L     + ++
Sbjct: 210 AA-QEV-EPDNTI-TLLGLAELNFLEEKNIKSQKI-YEKILSIDPDNIQALIGEASVLIE 265

Query: 389 LGQIEKAQELLRKAAKIDPRDAQAF 413
           LG+ ++A E   +A +IDP +  A 
Sbjct: 266 LGRFDEALEYFDEALEIDPYNLDAL 290



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/167 (26%), Positives = 78/167 (46%), Gaps = 4/167 (2%)

Query: 106 KEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPAL 165
           K E +  A  ++N   +ID +      G    LLA  + + +   +  VLE D DN+ AL
Sbjct: 129 KIEQYDDAILFFNIVLKIDPNNIDALNGNANALLAVNQYKLSLILYDKVLEIDLDNIDAL 188

Query: 166 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 225
            G+  V     +Y  S   +  A +V P     + LG+    +   +  K+++ +++ L 
Sbjct: 189 NGKGQVFLELNQYEQSRSAFLAAQEVEPDNTITL-LGLAELNFLEEKNIKSQKIYEKILS 247

Query: 226 LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALN 272
           +DP+N++AL+  A + +   E     + +E    A EI PY   ALN
Sbjct: 248 IDPDNIQALIGEASVLI---ELGRFDEALEYFDEALEIDPYNLDALN 291



 Score = 44.7 bits (104), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 61/280 (21%), Positives = 105/280 (37%), Gaps = 52/280 (18%)

Query: 110 FILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQA 169
           ++ A Q + KA   D     +  G G         + A   F+ VL+ D  N+ ALLG  
Sbjct: 65  YVTALQNFEKAFTADPKNFDSINGIGYSYYYLDRYDDAIKQFESVLKKDNRNIGALLGSG 124

Query: 170 CVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLG----IGLCRYKLGQLGKARQAFQRALQ 225
            V     +Y D++ F+   L++ P+   A+       + + +YKL  +      + + L+
Sbjct: 125 NVLLKIEQYDDAILFFNIVLKIDPNNIDALNGNANALLAVNQYKLSLI-----LYDKVLE 179

Query: 226 LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 285
           +D +N++AL     + L+ N+    R      Q   E+ P   + L  LA   F   ++ 
Sbjct: 180 IDLDNIDALNGKGQVFLELNQYEQSRSAFLAAQ---EVEPDNTITLLGLAELNFLEEKNI 236

Query: 286 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 345
             +++ E  L++                                        P   I   
Sbjct: 237 KSQKIYEKILSI---------------------------------------DPDN-IQAL 256

Query: 346 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 385
            G   V ++LG F  AL  F++ LEI P N + L     I
Sbjct: 257 IGEASVLIELGRFDEALEYFDEALEIDPYNLDALNGKDRI 296



 Score = 39.7 bits (91), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 20/73 (27%), Positives = 39/73 (53%)

Query: 347 GLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKID 406
           G     L +  ++ +L  ++KVLEI  DN + L   G ++++L Q E+++     A +++
Sbjct: 156 GNANALLAVNQYKLSLILYDKVLEIDLDNIDALNGKGQVFLELNQYEQSRSAFLAAQEVE 215

Query: 407 PRDAQAFIDLGEL 419
           P +    + L EL
Sbjct: 216 PDNTITLLGLAEL 228


>gi|322432943|ref|YP_004210192.1| hypothetical protein AciX9_4094 [Granulicella tundricola MP5ACTX9]
 gi|321165170|gb|ADW70874.1| Tetratricopeptide TPR_1 repeat-containing protein [Granulicella
           tundricola MP5ACTX9]
          Length = 663

 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 78/314 (24%), Positives = 133/314 (42%), Gaps = 20/314 (6%)

Query: 165 LLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRAL 224
           LL         GR SD+   Y   L+++P+   A+ L   L R + G L  + +  ++A+
Sbjct: 3   LLQTGLAHHRAGRLSDASHCYTALLRLNPAHADALNLSGVLARQR-GDLSVSERFIKKAI 61

Query: 225 QLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQH 284
              P        LA             KG E   RA  + P  A ++  LA     +G  
Sbjct: 62  HQSPSVATYHHHLAKTHTHQGNTLEAIKGYE---RAISLNPADADSIELLAKLLLASGTK 118

Query: 285 FLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA-GLYYMASVKEINKPHEFIF 343
               +L    L++    P +   Y+NL        D + +  +Y  A+ +  + P     
Sbjct: 119 DEALKLYRQLLSLC---PDRPDVYFNLGHLLEFDDDKDASLNIYREAARRFPDNPDA--- 172

Query: 344 PYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAA 403
            ++ L +     G  + A+ +FE VL + PD+ ET   LG ++  LG+ +KA+E    A 
Sbjct: 173 -HFNLARKLKAEGQTQQAINSFENVLLLKPDDAETFNYLGTLFHLLGETDKAKESYLLAI 231

Query: 404 KIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEK 461
           K  P    A  +LG LL+  D G     ++ A  +L+KA E  P  +    N+G +  ++
Sbjct: 232 KHKPDYPLALCNLGALLM--DFG----QWQVAEMMLRKAIELDPDLLAAYCNLGSVLAQQ 285

Query: 462 GEFESAHQSFKDAL 475
           G   +A ++ +  L
Sbjct: 286 GNTVAAIEALRQVL 299


>gi|165923888|ref|ZP_02219720.1| tetratricopeptide repeat protein/methyltransferase [Coxiella
           burnetii Q321]
 gi|165916673|gb|EDR35277.1| tetratricopeptide repeat protein/methyltransferase [Coxiella
           burnetii Q321]
          Length = 561

 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 80/318 (25%), Positives = 140/318 (44%), Gaps = 29/318 (9%)

Query: 165 LLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRAL 224
           LL +A  +  +G   ++LE Y + L+  P    A+  G G+   +L +  +A     RAL
Sbjct: 5   LLERAIQQHQQGSLKNALENYHKVLEDDPKQTAALH-GAGIALSQLCRNDEALHYIDRAL 63

Query: 225 QLDPENVEALVALAVMDLQANEAAGIRKGMEKM---QRAFEIYPYCAMALNYLANHFFFT 281
            L+P+N          + + N  +   K +E      +A ++ P  A A N +AN FF  
Sbjct: 64  LLEPQNA------TFQNSRGNILSQHGKLVEATIAYDQAIQLQPDYATAYNNIANCFFRQ 117

Query: 282 GQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKE---INKP 338
            +    ++  + A+A+    P  +++++N AR      +Y +A    +A +K    ++  
Sbjct: 118 KKFDNAKKAYQKAIALK---PHFANAHFNYARLLIELENYHQA----IAELKRTVAMSSH 170

Query: 339 HEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQEL 398
           H   F    L  V + LGDF  A+T +EK L + P+N +     G  +++  Q +KA + 
Sbjct: 171 HSAAFS--QLAHVYMYLGDFSKAITYYEKRLALEPENADAQYDCGLAHLKDNQFQKAIDY 228

Query: 399 LRKAAKIDPRDAQAFIDLGE-LLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVI 457
              A  ++P        L    L   D   AL  +      L++  ++  IE   N+GV+
Sbjct: 229 FTNALLLNPEHPDCHYSLATAYLQRGDHKEALIHY------LRQLEKKPQIECYYNVGVL 282

Query: 458 HFEKGEFESAHQSFKDAL 475
           H  +     A   FK AL
Sbjct: 283 HMYQERHREAIDYFKQAL 300



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 77/301 (25%), Positives = 127/301 (42%), Gaps = 16/301 (5%)

Query: 141 KGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIR 200
           +G ++ A   +  VLE D     AL G         R  ++L +  RAL + P      +
Sbjct: 15  QGSLKNALENYHKVLEDDPKQTAALHGAGIALSQLCRNDEALHYIDRALLLEPQ-NATFQ 73

Query: 201 LGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRA 260
              G    + G+L +A  A+ +A+QL P+   A   +A    +  +    +K     Q+A
Sbjct: 74  NSRGNILSQHGKLVEATIAYDQAIQLQPDYATAYNNIANCFFRQKKFDNAKKA---YQKA 130

Query: 261 FEIYPYCAMA-LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 319
             + P+ A A  NY          H  + +L  T    ++H    S ++  LA  Y   G
Sbjct: 131 IALKPHFANAHFNYARLLIELENYHQAIAELKRTVAMSSHH----SAAFSQLAHVYMYLG 186

Query: 320 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 379
           D+ KA  YY    K +    E     Y  G   LK   F+ A+  F   L + P++ +  
Sbjct: 187 DFSKAITYYE---KRLALEPENADAQYDCGLAHLKDNQFQKAIDYFTNALLLNPEHPDCH 243

Query: 380 KALGHIYVQLGQIEKAQ-ELLRKAAKIDPRDAQAFIDLGELLISSDTG-AALDAFKTART 437
            +L   Y+Q G  ++A    LR+  K  P+  + + ++G L +  +    A+D FK A T
Sbjct: 244 YSLATAYLQRGDHKEALIHYLRQLEK-KPQ-IECYYNVGVLHMYQERHREAIDYFKQALT 301

Query: 438 L 438
           L
Sbjct: 302 L 302


>gi|443899782|dbj|GAC77111.1| TPR-containing nuclear phosphoprotein that regulates K+ uptake
           [Pseudozyma antarctica T-34]
          Length = 1384

 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 66/267 (24%), Positives = 116/267 (43%), Gaps = 49/267 (18%)

Query: 13  EEVRVALDQLP--RDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFRQILEEGSSPE 70
           E + + LD LP   D    L+ L  E+     W  ++ + F +G++++  Q+  +G   +
Sbjct: 16  ESISLDLDPLPPAEDVQVFLEALAYERPASKYWTRLSSQLFIEGRIDEAVQVASKGV--Q 73

Query: 71  IDEYY--------------ADVRYERIA---ILNALGVYYTYLGKIETKQREKEEHFILA 113
           + E Y                +   R A   ILN     Y  LG     Q+ K++ +  +
Sbjct: 74  VLESYKPAETIPLRAFLAAVSLNSARTAPKLILN--DARYQRLGS----QQIKDDLYRRS 127

Query: 114 TQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEF 173
            Q  + A+ +D       + +   L   G+ E A   F  +L A+  +  ALLG+AC+  
Sbjct: 128 NQAQSPANALDPKHHINQLSRAIFLTTTGQNEGALVVFDAILNANPRHALALLGKACILL 187

Query: 174 NRGRYSDSLEFYKRALQVH------------------PSCPGAIRLGIGLCRYKLGQLGK 215
            + +Y+ +L+ Y+ AL+V                   P      R+GIGLC + LG    
Sbjct: 188 RKRQYAPALKLYQNALEVSLLVQANANENADILGWRGPDP----RVGIGLCLWGLGHHDA 243

Query: 216 ARQAFQRALQLDPENVEALVALAVMDL 242
           AR+A++RA+ ++  N  A + L +  L
Sbjct: 244 ARKAWKRAVHVNANNAAAHLLLGISSL 270


>gi|344345323|ref|ZP_08776177.1| Tetratricopeptide TPR_2 repeat-containing protein [Marichromatium
           purpuratum 984]
 gi|343803152|gb|EGV21064.1| Tetratricopeptide TPR_2 repeat-containing protein [Marichromatium
           purpuratum 984]
          Length = 544

 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 94/348 (27%), Positives = 135/348 (38%), Gaps = 57/348 (16%)

Query: 96  LGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVL 155
           LG I  ++R   E    A      A  ++  +P         LL  G  E A   ++  L
Sbjct: 98  LGLILLRRRHHAE----ALTVLEGALALEPRDPEILNAIATALLRLGRGEDALGYYRRTL 153

Query: 156 EADRDNVPAL--LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQL 213
           E   D+  A   LG A  EF  GR  ++L+ Y RA  + P  P A      +C  +LG+L
Sbjct: 154 EVAPDHAEAHYNLGLALHEF--GRLDEALKCYVRANAIDPELPQACNNAGNVCN-QLGRL 210

Query: 214 GKARQAFQRALQLDPENVEALVALAVMDLQAN--EAAGIRKGMEKMQRAFEIYPYCAMAL 271
            +A   F RAL  DP N + L  LA   ++A   EAA     +  ++RA  + P  A AL
Sbjct: 211 QQAIDWFSRALAQDPRNADVLNNLASAQIRACLFEAA-----LRTLERALALVPDHAEAL 265

Query: 272 NYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMAS 331
           N   N     G+    +Q    AL V                    + DY  A       
Sbjct: 266 NNRGNALVELGRLEAAQQSYLDALRV--------------------RPDYADA------- 298

Query: 332 VKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQ 391
                        Y  LG V   L     A+ ++ + L + PD  E    LG++   L  
Sbjct: 299 -------------YCNLGNVLDLLCKPLQAIDSYRRALALKPDLAEASLNLGNVLRDLDH 345

Query: 392 IEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTL 438
           + +A     +A    P   +A  +LG LL    D  A++ A + ARTL
Sbjct: 346 LSEALVCYERALATRPDYPEALSNLGCLLQDLGDFDASIAAREHARTL 393



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 110/439 (25%), Positives = 170/439 (38%), Gaps = 79/439 (17%)

Query: 220 FQRALQLDPENVEALVAL--------AVMDLQ----ANEAAGIRKGMEKM-------QRA 260
           ++  + +DP+   A  AL        AV D Q    A EA  +R G   +       +R 
Sbjct: 25  YRAVIAIDPDQAAAKAALRQLGTVDPAVPDEQVPWRAREALAVRIGAADLDGAEHEARRL 84

Query: 261 FEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGD 320
              +P    A   L         H     + E ALA+    P   ++   +A +    G 
Sbjct: 85  VASHPRDVFARKALGLILLRRRHHAEALTVLEGALALEPRDPEILNA---IATALLRLGR 141

Query: 321 YEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLK 380
            E A  YY  ++ E+   H     +Y LG    + G    AL  + +   I P+  +   
Sbjct: 142 GEDALGYYRRTL-EVAPDHAEA--HYNLGLALHEFGRLDEALKCYVRANAIDPELPQACN 198

Query: 381 ALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLK 440
             G++  QLG++++A +   +A   DPR+A    +L     S+   A L  F+ A   L+
Sbjct: 199 NAGNVCNQLGRLQQAIDWFSRALAQDPRNADVLNNLA----SAQIRACL--FEAALRTLE 252

Query: 441 KAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASAS 498
           +A   VP   E LNN G    E G  E+A QS+ DAL           + +    DA   
Sbjct: 253 RALALVPDHAEALNNRGNALVELGRLEAAQQSYLDAL-----------RVRPDYADA--- 298

Query: 499 MLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDY 558
                       + N GN ++L          L + L+ I         YR  L    D 
Sbjct: 299 ------------YCNLGNVLDL----------LCKPLQAIDS-------YRRALALKPDL 329

Query: 559 VDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDL--ELKN-DDWVKAKET 615
            +A L L  + +  ++L  ++     AL     YP ALS LG L  +L + D  + A+E 
Sbjct: 330 AEASLNLGNVLRDLDHLSEALVCYERALATRPDYPEALSNLGCLLQDLGDFDASIAAREH 389

Query: 616 FRAASDATDGKDSYATLSL 634
            R  S  +   DS    +L
Sbjct: 390 ARTLSHDSFAADSSLLFTL 408



 Score = 47.8 bits (112), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 84/359 (23%), Positives = 134/359 (37%), Gaps = 73/359 (20%)

Query: 342 IFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRK 401
           +F    LG + L+      ALT  E  L + P + E L A+    ++LG+ E A    R+
Sbjct: 92  VFARKALGLILLRRRHHAEALTVLEGALALEPRDPEILNAIATALLRLGRGEDALGYYRR 151

Query: 402 AAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFE 460
             ++ P  A+A  +LG  L        AL  +  A  +      E+P +  NN G +  +
Sbjct: 152 TLEVAPDHAEAHYNLGLALHEFGRLDEALKCYVRANAI----DPELP-QACNNAGNVCNQ 206

Query: 461 KGEFESAHQSFKDALGDG-----IWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDG 515
            G  + A   F  AL        +   L  ++ +  + +A+   L+ + + L        
Sbjct: 207 LGRLQQAIDWFSRALAQDPRNADVLNNLASAQIRACLFEAALRTLE-RALALV------P 259

Query: 516 NHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNL 575
           +H E   N+   L  L RL        AA   Y   L    DY DAY  L  +       
Sbjct: 260 DHAEALNNRGNALVELGRL-------EAAQQSYLDALRVRPDYADAYCNLGNV------- 305

Query: 576 QLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLG 635
              ++L+ + L+    Y  AL++  DL                         + A+L+LG
Sbjct: 306 ---LDLLCKPLQAIDSYRRALALKPDL-------------------------AEASLNLG 337

Query: 636 NWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVS 694
           N      LR        +  HL +A   Y R +        A +  G +L + G FD S
Sbjct: 338 N-----VLR--------DLDHLSEALVCYERALATRPDYPEALSNLGCLLQDLGDFDAS 383


>gi|425454202|ref|ZP_18833948.1| Genome sequencing data, contig C313 [Microcystis aeruginosa PCC
           9807]
 gi|389805176|emb|CCI15197.1| Genome sequencing data, contig C313 [Microcystis aeruginosa PCC
           9807]
          Length = 569

 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 74/297 (24%), Positives = 133/297 (44%), Gaps = 27/297 (9%)

Query: 134 KGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHP 193
           +G  LLA GE E A SA++ VL    ++V A +  A V  ++ RYS++L+ Y R   V+ 
Sbjct: 44  QGDRLLAAGEKESALSAYRTVLSFHENSVQAHIKIAQVLQSQKRYSEALQAYDRGFIVNN 103

Query: 194 SCP-----GAIRLGIGLCRYKLGQLGKARQAFQRALQLDPE-NVEALVALAVMDLQA-NE 246
             P         + +G    +  +  +A  A+Q+A+ + P    +  +  A+   Q  +E
Sbjct: 104 KPPMEPSQSNYLVALGDIFAQEEKWSEAIDAYQKAIIIKPTFKAQFQLGKALYSSQRWDE 163

Query: 247 AAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG----P 302
           AA      + +Q A  + P    A       +F+ G+ +  +QL   A           P
Sbjct: 164 AA------KALQAAVFLDPTQGKA-------YFYLGKAYSEQQLWPEASYAYQQALELIP 210

Query: 303 TKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSAL 362
            +  +Y  L  +   +G +E+A   Y  ++    K  +    Y  LG+   + G    A+
Sbjct: 211 DQGETYKKLGETLAKQGKWEEAEQIYRQALIYAPKDGDI---YNYLGEALAEQGKLGEAM 267

Query: 363 TNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGEL 419
             F++  +I P N +  + L +IY+  GQI++     R+A +IDP  ++    L E+
Sbjct: 268 AVFQQARQISPKNAKIYENLCYIYINNGQIDEGLNWCRQAVEIDPNLSEVRFILEEI 324


>gi|325187990|emb|CCA22532.1| predicted protein putative [Albugo laibachii Nc14]
          Length = 968

 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 102/481 (21%), Positives = 190/481 (39%), Gaps = 31/481 (6%)

Query: 141 KGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIR 200
            G  ++  S  + + E D  +   LL      F  G +++S+ + ++ +++ P    A  
Sbjct: 51  NGYYQETISLCEYLYEVDMYHTNNLLLLGAAHFQSGNFAESIYYNQQCIRLDPQFAEAYG 110

Query: 201 LGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRA 260
             +G    + G +  A   + +A+QL P   +A   LAV  +Q  +    ++ +E  + A
Sbjct: 111 -NLGNALKETGDIVGAIHFYVKAIQLHPRFSDAYNNLAVSYMQIGQ---WQQAIETYKTA 166

Query: 261 FEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGD 320
             + P    A + L N +   G +   +     A+ V    PT + ++ NLA  Y   G 
Sbjct: 167 LTLDPSLVDAHSNLGNLYKAQGMYEDAKSCFTDAIRVK---PTFAIAWSNLAGVYQHSGQ 223

Query: 321 YEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLK 380
            + A ++Y  +++      +F+  Y  LG    + G  + ++  ++K + I PD      
Sbjct: 224 LDAAIIHYQEAIR---LAPDFVDAYTNLGNALRESGRLQDSINVYKKAIRIRPDFATAHG 280

Query: 381 ALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLK 440
            L   Y   GQ++ A    R+A  ++P    A+ +LG  L   + G    +    RT L+
Sbjct: 281 NLASAYYDSGQMDLAILTFRQAILLEPNFPDAYNNLGNAL--REMGQLDQSILCYRTALR 338

Query: 441 KAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASML 500
              +       NN+G    +KG  + A   +  A        L+      Y    S    
Sbjct: 339 LKSDHP--HAYNNLGNALKDKGMIKEAIHCYSTA------ARLMPHLAAAYSNLGSVLKE 390

Query: 501 QFKDMQLFHRFEN----DGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQ 556
           Q K  Q    ++     D    +   N   V  ++ RL + I         Y   +    
Sbjct: 391 QGKLEQALAHYQQAITIDPRFADAFSNMGNVFKDMNRLDDSIQ-------CYTTAIRLKP 443

Query: 557 DYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETF 616
           ++ DAY  LA+  K    L+ +I    +AL +   +P+A +      +   DW   ++ F
Sbjct: 444 EFTDAYSNLASAYKDGGQLREAIACYRKALFLRPNFPDAFANYFHSMVFICDWETREKDF 503

Query: 617 R 617
           R
Sbjct: 504 R 504



 Score = 47.4 bits (111), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 83/396 (20%), Positives = 148/396 (37%), Gaps = 70/396 (17%)

Query: 348 LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 407
           LG    + G+F  ++   ++ + + P   E    LG+   + G I  A     KA ++ P
Sbjct: 78  LGAAHFQSGNFAESIYYNQQCIRLDPQFAEAYGNLGNALKETGDIVGAIHFYVKAIQLHP 137

Query: 408 RDAQAFIDLG-ELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFES 466
           R + A+ +L    +       A++ +KTA TL     +   ++  +N+G ++  +G +E 
Sbjct: 138 RFSDAYNNLAVSYMQIGQWQQAIETYKTALTL-----DPSLVDAHSNLGNLYKAQGMYED 192

Query: 467 AHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVT 526
           A   F DA+              T+ I                            W+   
Sbjct: 193 AKSCFTDAI----------RVKPTFAI---------------------------AWS--- 212

Query: 527 VLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEAL 586
              NLA + +      AA + Y+  +    D+VDAY  L    +    LQ SI +  +A+
Sbjct: 213 ---NLAGVYQHSGQLDAAIIHYQEAIRLAPDFVDAYTNLGNALRESGRLQDSINVYKKAI 269

Query: 587 KVNGKYPNALSMLGDLELKNDDWVKAKETFRAAS-DATDGKDSYATLSLGNWNYFAALRN 645
           ++   +  A   L      +     A  TFR A     +  D+Y   +LGN     ALR 
Sbjct: 270 RIRPDFATAHGNLASAYYDSGQMDLAILTFRQAILLEPNFPDAYN--NLGN-----ALR- 321

Query: 646 EKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAA 705
                  E   L+++   Y   +   + + +A N  G  L +KG    +   ++      
Sbjct: 322 -------EMGQLDQSILCYRTALRLKSDHPHAYNNLGNALKDKGMIKEAIHCYS-----T 369

Query: 706 SGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCL 741
           +  +   +   + NL  V   QG    A+  YQ  +
Sbjct: 370 AARLMPHLAAAYSNLGSVLKEQGKLEQALAHYQQAI 405


>gi|163784399|ref|ZP_02179288.1| hypothetical protein HG1285_04998 [Hydrogenivirga sp. 128-5-R1-1]
 gi|159880330|gb|EDP73945.1| hypothetical protein HG1285_04998 [Hydrogenivirga sp. 128-5-R1-1]
          Length = 202

 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 70/133 (52%), Gaps = 4/133 (3%)

Query: 345 YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAK 404
           Y+ +G   L  G+   A+ N  +   I P + + L ALG  Y ++G+++KAQE   KA +
Sbjct: 37  YFKMGVSYLNSGNVAEAIYNLNQAYAIKPKDPDILNALGIAYTKVGELDKAQEYFLKAIQ 96

Query: 405 IDPRDAQAFIDLGELLI-SSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGE 463
            +P  A+++++LG LL    D G+A + FK A   +K    +   +   N+ +++ + G 
Sbjct: 97  TNPEKAESYVNLGILLAKKKDYGSAKNYFKKA---IKNPNYKNKEKAYYNLALVYLKLGN 153

Query: 464 FESAHQSFKDALG 476
            +   +S K A+ 
Sbjct: 154 LKRYEESLKKAIA 166



 Score = 40.8 bits (94), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 19/67 (28%), Positives = 38/67 (56%), Gaps = 1/67 (1%)

Query: 174 NRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEA 233
           N G  ++++    +A  + P  P  +   +G+   K+G+L KA++ F +A+Q +PE  E+
Sbjct: 46  NSGNVAEAIYNLNQAYAIKPKDPDILN-ALGIAYTKVGELDKAQEYFLKAIQTNPEKAES 104

Query: 234 LVALAVM 240
            V L ++
Sbjct: 105 YVNLGIL 111


>gi|113477431|ref|YP_723492.1| hypothetical protein Tery_3996 [Trichodesmium erythraeum IMS101]
 gi|110168479|gb|ABG53019.1| Tetratricopeptide TPR_2 [Trichodesmium erythraeum IMS101]
          Length = 1694

 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 90/322 (27%), Positives = 145/322 (45%), Gaps = 36/322 (11%)

Query: 113  ATQYYNKASRI--DMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQAC 170
            A   Y KA  I  D HE   W  KG  L      E+A +A++  LE   D   A   +  
Sbjct: 1061 AVAAYEKALEIKPDFHE--AWHNKGIALENLERYEEAVAAYEKALEIKPDYHYAWHNKGD 1118

Query: 171  VEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPEN 230
               N  RY +++  Y++AL++ P    A   G G+   KL +  +A  AF++AL++ P+ 
Sbjct: 1119 ALENLERYEEAVAAYEKALEIKPDYHYAWN-GKGIALIKLERYEEAVAAFEKALEIKPDF 1177

Query: 231  VEA--LVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVE 288
             +A  L   A+ +L+  E A     +   ++A EI P    A N          +   +E
Sbjct: 1178 HDAWFLKGNALGNLERYEEA-----VAAFEKALEIKPDFHEAWN---------NKGIALE 1223

Query: 289  QLT--ETALAVTNHGPTKSHSYYNLARSYHSKGD-------YEKAGLYYMASVKEINKPH 339
            +L   E A+A           ++    ++H+KG+       YE+A   Y  ++ EI KP 
Sbjct: 1224 KLERYEEAVAAFEKALEIKPDFH---EAWHNKGNALIKLERYEEAVAAYEKAL-EI-KP- 1277

Query: 340  EFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELL 399
            +F   ++  G   +KL  +  A+  +EK LEI PD  E     G+  ++L + E+A    
Sbjct: 1278 DFHDAWFLKGNALIKLERYEEAVAAYEKALEIKPDFHEAWFLKGNALIKLERYEEAVAAY 1337

Query: 400  RKAAKIDPRDAQAFIDLGELLI 421
             KA +I P   +A+   G  LI
Sbjct: 1338 EKALEIKPDFHEAWFLKGNALI 1359



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 87/318 (27%), Positives = 135/318 (42%), Gaps = 54/318 (16%)

Query: 113  ATQYYNKASRI--DMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQAC 170
            A   Y KA  I  D HE   W  KG  L+     E+A +A++  LE   D   A   +  
Sbjct: 1333 AVAAYEKALEIKPDFHE--AWFLKGNALIKLERYEEAVAAYEKALEIKPDFHEAWFLKGN 1390

Query: 171  VEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPEN 230
               N  RY +++  Y++AL++ P    A     G+   KL +  +A  AF++AL++ P+ 
Sbjct: 1391 ALGNLERYEEAVAAYEKALEIKPDFHEAWH-NKGIALGKLERYEEAVAAFEKALEIKPDF 1449

Query: 231  VEAL--VALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVE 288
             EA      A++ L+  E A     +   ++A EI P    A       +F  G   +  
Sbjct: 1450 HEAWHNKGNALIKLERYEEA-----VAAYEKALEIKPDFHEA-------WFLKGNALIKL 1497

Query: 289  QLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGL 348
            +  E A+A                        YEKA         EI KP +F   ++  
Sbjct: 1498 ERYEEAVAA-----------------------YEKA--------LEI-KP-DFHEAWFLK 1524

Query: 349  GQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPR 408
            G   +KL  +  A+  +EK LEI PD  E     G+  ++L + E+A     KA +I P 
Sbjct: 1525 GNALIKLERYEEAVAAYEKALEIKPDFHEAWFLKGNALIKLERYEEAVAAYEKALEIKPD 1584

Query: 409  DAQAFIDLGELLISSDTG 426
            D  + I+LG  L+  + G
Sbjct: 1585 DEYSIINLG--LVKYEMG 1600



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 103/373 (27%), Positives = 157/373 (42%), Gaps = 34/373 (9%)

Query: 113 ATQYYNKASRI--DMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQAC 170
           A   Y KA  I  D HE   W  KG  L      E+A +A++  LE   D   A   +  
Sbjct: 449 AVAAYEKALEIKPDFHE--AWFLKGNALGNLERYEEAVAAYEKALEIKPDFHDAWFLKGN 506

Query: 171 VEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPEN 230
              N  RY +++  Y++AL++ P    A  L  G     L +  +A  A+++AL++ P+ 
Sbjct: 507 ALGNLERYEEAVAAYEKALEIKPDFHDAWFLK-GNALGNLERYEEAVAAYEKALEIKPDF 565

Query: 231 VEA--LVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMAL----NYLANHFFFTGQH 284
            EA  L   A+ +L+  E A     +   ++A EI P    A     N L N   +    
Sbjct: 566 HEAWFLKGNALGNLERYEEA-----VAAYEKALEIKPDFHEAWFLKGNALGNLERYEEAV 620

Query: 285 FLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFP 344
              E+  E      +    K ++  NL R   +   YEKA         EI KP +F + 
Sbjct: 621 AAYEKALEIKPDFHDAWFLKGNALGNLERYEEAVAAYEKA--------LEI-KP-DFHYA 670

Query: 345 YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAK 404
           ++  G     L  +  A+  FEK LEI PD  E     G    +L + E+A     KA +
Sbjct: 671 WFLKGNALGNLERYEEAVAAFEKALEIKPDFHEAWNNKGIALEKLERYEEAVAAFEKALE 730

Query: 405 IDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPI--EVLNNIGVIHFEKG 462
           I P   +A+ + G  L        L+ ++ A    +KA E  P   E  NN G+   +  
Sbjct: 731 IKPDFHEAWNNKGIAL------EKLERYEEAVAAFEKALEIKPDFHEAWNNKGIALEKLE 784

Query: 463 EFESAHQSFKDAL 475
            +E A  +F+ AL
Sbjct: 785 RYEEAVAAFEKAL 797



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 88/329 (26%), Positives = 147/329 (44%), Gaps = 42/329 (12%)

Query: 105  EKEEHFILATQYYNKASRI--DMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNV 162
            EK E +  A   + KA  I  D HE   W  KG  L      E+A +AF+  LE   D  
Sbjct: 747  EKLERYEEAVAAFEKALEIKPDFHE--AWNNKGIALEKLERYEEAVAAFEKALEIKPDFH 804

Query: 163  PALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQR 222
             A   +        RY +++  +++AL++ P    A  L  G     L +  +A  A+++
Sbjct: 805  EAWNNKGIALEKLERYEEAVAAFEKALEIKPDFHDAWFLK-GNALGNLERYEEAVAAYEK 863

Query: 223  ALQLDPENVEAL--VALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFF 280
            AL++ P+  EA     +A+ +L+  E A     +   ++A EI P    A N        
Sbjct: 864  ALEIKPDFHEAWHNKGIALENLERYEEA-----VAAYEKALEIKPDFHEAWN-------- 910

Query: 281  TGQHFLVEQLT--ETALAVTNHGPTKSHSYYNLARSYHSKGD-------YEKAGLYYMAS 331
              +   +E+L   E A+A           ++    ++H+KG+       YE+A   Y  +
Sbjct: 911  -NKGIALEKLERYEEAVAAFEKALEIKPDFH---EAWHNKGNALGNLERYEEAVAAYEKA 966

Query: 332  VKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQ 391
            + EI KP +F + ++  G    KL  +  A+  +EK LEI PD  E     G   + LG+
Sbjct: 967  L-EI-KP-DFHYAWFLKGIALGKLERYEEAVAAYEKALEIKPDFHEAWFLKG---IALGK 1020

Query: 392  IEKAQELL---RKAAKIDPRDAQAFIDLG 417
            +E+ +E +    KA +I P   +A+ + G
Sbjct: 1021 LERYEEAVAAYEKALEIKPDFHEAWHNKG 1049



 Score = 52.8 bits (125), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 75/295 (25%), Positives = 125/295 (42%), Gaps = 20/295 (6%)

Query: 118 NKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGR 177
           ++A +I+ ++ + W  KG  L+     E+A +A++  LE   D   A   +     N  R
Sbjct: 250 DEALKIEPNDYNAWNNKGSALINLERYEEAVAAYEKALEIKPDFHEAWFLKGIALINLER 309

Query: 178 YSDSLEFYKRALQVHPSCPGAIRL-GIGLCRYKLGQLGKARQAFQRALQLDPENVEALV- 235
           Y +++  Y++AL++ P    A  L GI L    L +  +A  A+++AL++ P+  EA   
Sbjct: 310 YEEAVAAYEKALEIKPDFHEAWFLKGIALIN--LERYEEAVAAYEKALEIKPDFHEAWFL 367

Query: 236 ---ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTE 292
              AL  ++      A   K +E      E +    +AL  L  +      +   E+  E
Sbjct: 368 KGNALGNLERYEEAVAAYEKALEIKPDFHEAWFLKGIALGNLERYEEAVAAY---EKALE 424

Query: 293 TALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQ 352
                      K ++  NL R   +   YEKA         EI KP +F   ++  G   
Sbjct: 425 IKPDFHEAWFLKGNALGNLERYEEAVAAYEKA--------LEI-KP-DFHEAWFLKGNAL 474

Query: 353 LKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 407
             L  +  A+  +EK LEI PD  +     G+    L + E+A     KA +I P
Sbjct: 475 GNLERYEEAVAAYEKALEIKPDFHDAWFLKGNALGNLERYEEAVAAYEKALEIKP 529



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 80/312 (25%), Positives = 125/312 (40%), Gaps = 18/312 (5%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
           A   Y KA  I       W  KG  L      E+A +AF+  LE   D   A   +    
Sbjct: 653 AVAAYEKALEIKPDFHYAWFLKGNALGNLERYEEAVAAFEKALEIKPDFHEAWNNKGIAL 712

Query: 173 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 232
               RY +++  +++AL++ P    A     G+   KL +  +A  AF++AL++ P+  E
Sbjct: 713 EKLERYEEAVAAFEKALEIKPDFHEAWN-NKGIALEKLERYEEAVAAFEKALEIKPDFHE 771

Query: 233 AL----VALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVE 288
           A     +AL  ++      A   K +E      E +    +AL  L     +       E
Sbjct: 772 AWNNKGIALEKLERYEEAVAAFEKALEIKPDFHEAWNNKGIALEKLER---YEEAVAAFE 828

Query: 289 QLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGL 348
           +  E      +    K ++  NL R   +   YEKA         EI KP +F   ++  
Sbjct: 829 KALEIKPDFHDAWFLKGNALGNLERYEEAVAAYEKA--------LEI-KP-DFHEAWHNK 878

Query: 349 GQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPR 408
           G     L  +  A+  +EK LEI PD  E     G    +L + E+A     KA +I P 
Sbjct: 879 GIALENLERYEEAVAAYEKALEIKPDFHEAWNNKGIALEKLERYEEAVAAFEKALEIKPD 938

Query: 409 DAQAFIDLGELL 420
             +A+ + G  L
Sbjct: 939 FHEAWHNKGNAL 950



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 88/336 (26%), Positives = 144/336 (42%), Gaps = 38/336 (11%)

Query: 96   LGKIETKQREKEEHFILATQYYNKASRI--DMHEPSTWVGKGQLLLAKGEVEQASSAFKI 153
            LGK+E  +         A   Y KA  I  D HE   W  KG  L      E+A +A++ 
Sbjct: 984  LGKLERYEE--------AVAAYEKALEIKPDFHE--AWFLKGIALGKLERYEEAVAAYEK 1033

Query: 154  VLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQL 213
             LE   D   A   +     N  RY +++  Y++AL++ P    A     G+    L + 
Sbjct: 1034 ALEIKPDFHEAWHNKGIALENLERYEEAVAAYEKALEIKPDFHEAWH-NKGIALENLERY 1092

Query: 214  GKARQAFQRALQLDPENVEAL--VALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMAL 271
             +A  A+++AL++ P+   A      A+ +L+  E A     +   ++A EI P      
Sbjct: 1093 EEAVAAYEKALEIKPDYHYAWHNKGDALENLERYEEA-----VAAYEKALEIKP------ 1141

Query: 272  NYLANHFFFTGQHFLVEQLT--ETALAVTNHG----PTKSHSYYNLARSYHSKGDYEKAG 325
            +Y   H+ + G+   + +L   E A+A         P    +++    +  +   YE+A 
Sbjct: 1142 DY---HYAWNGKGIALIKLERYEEAVAAFEKALEIKPDFHDAWFLKGNALGNLERYEEAV 1198

Query: 326  LYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 385
              +  ++ EI KP +F   +   G    KL  +  A+  FEK LEI PD  E     G+ 
Sbjct: 1199 AAFEKAL-EI-KP-DFHEAWNNKGIALEKLERYEEAVAAFEKALEIKPDFHEAWHNKGNA 1255

Query: 386  YVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLI 421
             ++L + E+A     KA +I P    A+   G  LI
Sbjct: 1256 LIKLERYEEAVAAYEKALEIKPDFHDAWFLKGNALI 1291



 Score = 48.9 bits (115), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 83/313 (26%), Positives = 132/313 (42%), Gaps = 26/313 (8%)

Query: 113 ATQYYNKASRI--DMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQAC 170
           A   Y KA  I  D H+   W  KG  L      E+A +A++  LE   D   A   +  
Sbjct: 517 AVAAYEKALEIKPDFHD--AWFLKGNALGNLERYEEAVAAYEKALEIKPDFHEAWFLKGN 574

Query: 171 VEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPEN 230
              N  RY +++  Y++AL++ P    A  L  G     L +  +A  A+++AL++ P+ 
Sbjct: 575 ALGNLERYEEAVAAYEKALEIKPDFHEAWFLK-GNALGNLERYEEAVAAYEKALEIKPDF 633

Query: 231 VEA--LVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVE 288
            +A  L   A+ +L+  E A     +   ++A EI P    A       +F  G      
Sbjct: 634 HDAWFLKGNALGNLERYEEA-----VAAYEKALEIKPDFHYA-------WFLKGNALGNL 681

Query: 289 QLTETALAVTNHG----PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFP 344
           +  E A+A         P    ++ N   +      YE+A   +  ++ EI KP +F   
Sbjct: 682 ERYEEAVAAFEKALEIKPDFHEAWNNKGIALEKLERYEEAVAAFEKAL-EI-KP-DFHEA 738

Query: 345 YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAK 404
           +   G    KL  +  A+  FEK LEI PD  E     G    +L + E+A     KA +
Sbjct: 739 WNNKGIALEKLERYEEAVAAFEKALEIKPDFHEAWNNKGIALEKLERYEEAVAAFEKALE 798

Query: 405 IDPRDAQAFIDLG 417
           I P   +A+ + G
Sbjct: 799 IKPDFHEAWNNKG 811



 Score = 47.0 bits (110), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 83/305 (27%), Positives = 128/305 (41%), Gaps = 30/305 (9%)

Query: 113 ATQYYNKASRI--DMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQAC 170
           A   Y KA  I  D HE   W  KG  L      E+A +A++  LE   D   A   +  
Sbjct: 551 AVAAYEKALEIKPDFHE--AWFLKGNALGNLERYEEAVAAYEKALEIKPDFHEAWFLKGN 608

Query: 171 VEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPEN 230
              N  RY +++  Y++AL++ P    A  L  G     L +  +A  A+++AL++ P+ 
Sbjct: 609 ALGNLERYEEAVAAYEKALEIKPDFHDAWFLK-GNALGNLERYEEAVAAYEKALEIKPDF 667

Query: 231 VEA--LVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVE 288
             A  L   A+ +L+  E A     +   ++A EI P    A N          +   +E
Sbjct: 668 HYAWFLKGNALGNLERYEEA-----VAAFEKALEIKPDFHEAWN---------NKGIALE 713

Query: 289 QLT--ETALAVTNHG----PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFI 342
           +L   E A+A         P    ++ N   +      YE+A   +  ++ EI KP +F 
Sbjct: 714 KLERYEEAVAAFEKALEIKPDFHEAWNNKGIALEKLERYEEAVAAFEKAL-EI-KP-DFH 770

Query: 343 FPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKA 402
             +   G    KL  +  A+  FEK LEI PD  E     G    +L + E+A     KA
Sbjct: 771 EAWNNKGIALEKLERYEEAVAAFEKALEIKPDFHEAWNNKGIALEKLERYEEAVAAFEKA 830

Query: 403 AKIDP 407
            +I P
Sbjct: 831 LEIKP 835


>gi|304311485|ref|YP_003811083.1| hypothetical protein HDN1F_18550 [gamma proteobacterium HdN1]
 gi|301797218|emb|CBL45438.1| Conserved hypothetical protein [gamma proteobacterium HdN1]
          Length = 600

 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 76/305 (24%), Positives = 132/305 (43%), Gaps = 39/305 (12%)

Query: 196 PGAIRLGIGLCRYKLGQ--LGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIR-- 251
           P + RLG+   R  L Q  +  A++ F R +   PE+ +  ++LA++  + N+A G+   
Sbjct: 275 PDSKRLGLSYARLLLRQKRIDDAQKEFSRLVAQFPEDTDLALSLALVAWE-NDAEGVAET 333

Query: 252 --KGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYY 309
             K +   +R+ E + Y                QH   E + + +L   N GP  + +  
Sbjct: 334 QLKKLVDTERSNEAHTYLGR---------IAAAQHRNSEAVEQFSL--VNEGPLFTAARM 382

Query: 310 NLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVL 369
            +A    S    ++A    +A  ++   P + +  Y    ++    G    AL   E+  
Sbjct: 383 QMAALLASDKQVDEA-CQTLARARQ-RAPQDSLQLYMMESEILSAAGRKSDALNVLEQTA 440

Query: 370 EIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAAL 429
           E YP+N   L A G +Y  + Q E  ++ +RK   +DP +A A   LG  L  +D    L
Sbjct: 441 EQYPENLSVLYAKGMMYGDMDQWEPMEQTMRKILALDPNNADAMNALGYTL--ADRNIRL 498

Query: 430 DAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKGE-------FESAHQSFKDA-----L 475
           D    A  L+ KA    P    VL+++G + F +G+         +A++ F D      L
Sbjct: 499 D---EAYQLISKALSLTPNNPAVLDSMGWVKFRRGDLTGAVELLRAAYKDFPDPEVAAHL 555

Query: 476 GDGIW 480
           G+ +W
Sbjct: 556 GEALW 560


>gi|326434846|gb|EGD80416.1| hypothetical protein PTSG_11061 [Salpingoeca sp. ATCC 50818]
          Length = 850

 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 61/262 (23%), Positives = 115/262 (43%), Gaps = 26/262 (9%)

Query: 137 LLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCP 196
           L + + +V+QA     + ++AD+ N  AL+ +    F R R  ++ E Y+ AL +  SC 
Sbjct: 467 LYILENDVKQAERYADLAMDADKYNHCALVNKGNCAFMRKRLEEAQELYQEALAIDSSCS 526

Query: 197 GAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEK 256
            A+   +GL    LG L  A + F R   L P+  E + A+A ++ Q ++     +  E 
Sbjct: 527 EAL-FNLGLVHRDLGNLEDALEYFHRVNLLVPDTPEVVAAIAALNEQLDD---TDQACEW 582

Query: 257 MQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH--------GPTKSHSY 308
                 + P    AL +L + F         ++L + + A   H            + S+
Sbjct: 583 YNTLISLVPSDPNALAHLGDMF---------DRLDDKSQAFQYHFEGFRYFPAEINTISW 633

Query: 309 YNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKV 368
           +    SY+    Y +  + +     EI +P E  +    +     K G+++ AL  ++++
Sbjct: 634 FG---SYYIDSQYIQKAIQFFQRAVEI-QPGEVKWRLM-IASCHRKTGNYQRALETYKRI 688

Query: 369 LEIYPDNCETLKALGHIYVQLG 390
             ++P+N E LK L  +   +G
Sbjct: 689 HTLFPENIECLKFLIRLCTDMG 710


>gi|195998618|ref|XP_002109177.1| hypothetical protein TRIADDRAFT_52944 [Trichoplax adhaerens]
 gi|190587301|gb|EDV27343.1| hypothetical protein TRIADDRAFT_52944 [Trichoplax adhaerens]
          Length = 1410

 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 144/674 (21%), Positives = 267/674 (39%), Gaps = 122/674 (18%)

Query: 150 AFKIVLEADRDNVPALLGQ----ACVEFNRGRYSDSLEFYKRALQV--------HPSCPG 197
           + KI L+   DN P++       A V  N+G+Y D+L  Y ++L++        HPS   
Sbjct: 249 SLKIRLKTLGDNHPSVAESYNNIALVYKNQGKYDDALSMYNKSLKIRLEILGENHPSLAT 308

Query: 198 AIRLGIGLCRYKLGQLGKARQAFQRALQL--------DPENVEALVALAVMDLQANEAAG 249
           +    IG      G+   A   + ++L +         P   ++   +A +     +   
Sbjct: 309 SYN-NIGGVYDSQGKYDDALSMYNKSLDIRLVTYGNNHPSVADSYNNIATVYWNQGK--- 364

Query: 250 IRKGMEKMQRAFEI--------YPYCAMALNYLANHFFFTGQHFLVEQLTETALAV---- 297
               +     +F+I        +   A + N +   ++  G+H     +   +L +    
Sbjct: 365 YNDALTTYNESFKIRLATLGDNHSSVADSYNNIGGVYWNQGKHDDALPMFNKSLEIRLKT 424

Query: 298 --TNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFP-----YYGLGQ 350
              NH P+ + SY N+A  YH +G Y++A   Y  S+K   + H    P     Y  +G 
Sbjct: 425 LGDNH-PSVADSYNNIASVYHHQGKYDEALSMYNKSLKIRLETHGDNHPSLAESYNNIGG 483

Query: 351 VQLKLGDFRSALTNFEK----VLEIYPDN----CETLKALGHIYVQLGQIEKAQELLRKA 402
           V    G + SAL+ + K     LE   DN      +   +G +Y   G+ + A  +  K+
Sbjct: 484 VYYNQGTYDSALSMYSKSLNITLETTGDNHLSVANSYNNIGLVYDTQGKHDSALSMYNKS 543

Query: 403 AKID--------PRDAQAFIDLGELLISSDTGAALDAFKTARTLLK----KAGEEVP--I 448
             I         P  A ++ ++G   +  + G   DA       LK      G+  P   
Sbjct: 544 LNITLETFGDNHPSVATSYNNIGS--VYKNQGKYDDALTMYNKSLKIRQETLGDNHPSVA 601

Query: 449 EVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLF 508
           +  NNI +++  +G+++       DAL   ++   L  + +T   +  +    +KD+ L 
Sbjct: 602 KSYNNIALVYKNQGKYD-------DAL--SMYNKSLKIRQETLGDNHPSVAESYKDIALV 652

Query: 509 HRFENDG---NHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILF----KYQDYVDA 561
             +EN G   N + +    + +      +L   H +VA S      ++    KY D +  
Sbjct: 653 --YENQGKYDNALSMYSKSLKITL---EILGDNHPSVADSYSKIATVYDHQGKYDDALSM 707

Query: 562 Y---LRLAAIAKARNNLQLSIELVNEALKVN--GKYPNALSMLG-DLELK----NDDWVK 611
           Y   L++  +    N+L ++    N AL  +  GKY +ALSM    LE++     D+   
Sbjct: 708 YNESLKIRVVRLGDNHLHVTDSYNNIALVYDHQGKYDDALSMYNKSLEIRLKTLGDNHPS 767

Query: 612 AKETFRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQH 671
             E++          ++ A +      Y  AL    ++ K+    LE   E        H
Sbjct: 768 VAESY----------NNIALVYKNQGKYDDALSMYNKSLKIR---LEILGE-------NH 807

Query: 672 TSNLYAANGAGVVLAEKGQFDVSKDLFTQ---VQEAASGSVFVQMPDVWINLAHVYFAQG 728
            S   + N  G V   +G++D +  ++ +   ++    G+    + D + N+A VY+ QG
Sbjct: 808 PSLATSYNNIGGVYDSQGKYDDALSMYNKSLDIRLVTYGNNHPSVADSYNNIATVYWNQG 867

Query: 729 NFALAMKMYQNCLR 742
            +  A+  Y    +
Sbjct: 868 KYNDALTTYNESFK 881



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 132/631 (20%), Positives = 248/631 (39%), Gaps = 120/631 (19%)

Query: 169 ACVEFNRGRYSDSLEFYKRALQV--------HPSCPGAIRLGIGLCRYKLGQLGKARQAF 220
           A V  ++G+Y D+L  Y ++L++        HPS   +    I L     G+   A   +
Sbjct: 230 ALVYDHQGKYDDALSMYNKSLKIRLKTLGDNHPSVAESYN-NIALVYKNQGKYDDALSMY 288

Query: 221 QRALQLDPENV-EALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFF 279
            ++L++  E + E   +LA      N   G+     K   A  +Y               
Sbjct: 289 NKSLKIRLEILGENHPSLAT---SYNNIGGVYDSQGKYDDALSMYN-------------- 331

Query: 280 FTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK----EI 335
                   + L    +   N+ P+ + SY N+A  Y ++G Y  A   Y  S K     +
Sbjct: 332 --------KSLDIRLVTYGNNHPSVADSYNNIATVYWNQGKYNDALTTYNESFKIRLATL 383

Query: 336 NKPHEFIF-PYYGLGQVQLKLGDFRSALTNFEKVLEI--------YPDNCETLKALGHIY 386
              H  +   Y  +G V    G    AL  F K LEI        +P   ++   +  +Y
Sbjct: 384 GDNHSSVADSYNNIGGVYWNQGKHDDALPMFNKSLEIRLKTLGDNHPSVADSYNNIASVY 443

Query: 387 VQLGQIEKAQELLRKAAKI--------DPRDAQAFIDLGELLISSDT-GAALDAF-KTAR 436
              G+ ++A  +  K+ KI         P  A+++ ++G +  +  T  +AL  + K+  
Sbjct: 444 HHQGKYDEALSMYNKSLKIRLETHGDNHPSLAESYNNIGGVYYNQGTYDSALSMYSKSLN 503

Query: 437 TLLKKAGEE--VPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVID 494
             L+  G+         NNIG+++  +G+ +SA   +  +L     +TL     +T+  +
Sbjct: 504 ITLETTGDNHLSVANSYNNIGLVYDTQGKHDSALSMYNKSLN----ITL-----ETFGDN 554

Query: 495 ASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQ-----IHDTVAASVLYR 549
             +    + ++     ++N G      ++    ++N +  + Q      H +VA S    
Sbjct: 555 HPSVATSYNNIGSV--YKNQG-----KYDDALTMYNKSLKIRQETLGDNHPSVAKSYNNI 607

Query: 550 LILF----KYQDYVDAY-----LRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLG 600
            +++    KY D +  Y     +R   +     ++  S + +    +  GKY NALSM  
Sbjct: 608 ALVYKNQGKYDDALSMYNKSLKIRQETLGDNHPSVAESYKDIALVYENQGKYDNALSMYS 667

Query: 601 -----DLELKNDDWVKAKETFRAASDATDGKDSY-ATLSLGNWNYFAALRNEKRAPKLEA 654
                 LE+  D+     +++   +   D +  Y   LS+    Y  +L+   R  +L  
Sbjct: 668 KSLKITLEILGDNHPSVADSYSKIATVYDHQGKYDDALSM----YNESLK--IRVVRLGD 721

Query: 655 THLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMP 714
            HL             H ++ Y  N   +V   +G++D +  ++ +  E    ++    P
Sbjct: 722 NHL-------------HVTDSY--NNIALVYDHQGKYDDALSMYNKSLEIRLKTLGDNHP 766

Query: 715 DV---WINLAHVYFAQGNFALAMKMYQNCLR 742
            V   + N+A VY  QG +  A+ MY   L+
Sbjct: 767 SVAESYNNIALVYKNQGKYDDALSMYNKSLK 797



 Score = 56.6 bits (135), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 137/668 (20%), Positives = 244/668 (36%), Gaps = 152/668 (22%)

Query: 150  AFKIVLEADRDNVPALLGQ----ACVEFNRGRYSDSLEFYKRALQV--------HPSCPG 197
            + +I L+   DN P++       A V  N+G+Y D+L  Y ++L++        HPS   
Sbjct: 753  SLEIRLKTLGDNHPSVAESYNNIALVYKNQGKYDDALSMYNKSLKIRLEILGENHPSLAT 812

Query: 198  AIRLGIGLCRYKLGQLGKARQAFQRALQL--------DPENVEALVALAVMDLQANEAAG 249
            +    IG      G+   A   + ++L +         P   ++   +A +     +   
Sbjct: 813  SYN-NIGGVYDSQGKYDDALSMYNKSLDIRLVTYGNNHPSVADSYNNIATVYWNQGK--- 868

Query: 250  IRKGMEKMQRAFEI--------YPYCAMALNYLANHFFFTGQHFLVEQLTETALAV---- 297
                +     +F+I        +   A + N +   ++  G+H     +   +L +    
Sbjct: 869  YNDALTTYNESFKIRLATLGDNHSSVADSYNNIGGVYWNQGKHDDALPMFNKSLEIRLKT 928

Query: 298  --TNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFP-----YYGLGQ 350
               NH P+ + SY N+A  YH +G Y++A   Y  S+K   + H    P     Y  +G 
Sbjct: 929  LGDNH-PSVADSYNNIASVYHHQGKYDEALSMYNKSLKIRLETHGDNHPSLAESYNNIGG 987

Query: 351  VQLKLGDFRSALTNFEK----VLEIYPDN----CETLKALGHIYVQLGQIEKAQELLRKA 402
            V    G + SAL+ + K     LE   DN      +   +G +Y   G+ + A  +  K+
Sbjct: 988  VYYNQGTYDSALSMYSKSLNITLETTGDNHLSVANSYNNIGLVYDTQGKHDSALSMYNKS 1047

Query: 403  AKID--------PRDAQAFIDLGELLISSDTGAALDAFKTARTLLK----KAGEEVP--I 448
              I         P  A ++ ++G   +  + G   DA       LK      G+  P   
Sbjct: 1048 LNITLETFGDNHPSVATSYNNIGS--VYKNQGKYDDALSMYNKSLKIRQETLGDNHPKVA 1105

Query: 449  EVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLF 508
            +  NNI +++  +G+++       DAL   ++   L  + +T   +  +    +KD+ L 
Sbjct: 1106 KSYNNIALVYKNQGKYD-------DAL--SMYNKSLKIRQETLGDNHPSVAESYKDIALV 1156

Query: 509  HRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAY-----L 563
              + N G                                      KY D +  Y     +
Sbjct: 1157 --YNNQG--------------------------------------KYDDALSMYNKSLKI 1176

Query: 564  RLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLG---DLELKNDDWVKAKETFRAAS 620
            R   + +   NL  S   +       GKY +ALSM     D+ L               +
Sbjct: 1177 RQETLGENHPNLANSYNSIALVYDHQGKYDDALSMYNKSLDIRL-----------VTYGN 1225

Query: 621  DATDGKDSYATLSLGNWN---YFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYA 677
            + +   DSY  ++   WN   Y  AL +   + K+    L             H S   +
Sbjct: 1226 NHSSVADSYNNIATVYWNQGKYNDALTSYNESFKIRLATLGD----------NHPSVADS 1275

Query: 678  ANGAGVVLAEKGQFDVSKDLFT---QVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAM 734
             N  G V   +G+ D +  +F    +++    G     + D + N+A VY  QG +  A+
Sbjct: 1276 YNNIGGVYWNQGKHDDALPMFNKSLEIRLKTLGDNHPSVADSYNNIASVYHHQGKYDEAL 1335

Query: 735  KMYQNCLR 742
             MY   L+
Sbjct: 1336 SMYNKSLK 1343



 Score = 48.9 bits (115), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 74/342 (21%), Positives = 132/342 (38%), Gaps = 54/342 (15%)

Query: 150  AFKIVLEADRDNVPALLGQ----ACVEFNRGRYSDSLEFYKRALQV--------HPSCPG 197
            +  I LE   DN P++         V  N+G+Y D+L  Y ++L++        HP    
Sbjct: 1047 SLNITLETFGDNHPSVATSYNNIGSVYKNQGKYDDALSMYNKSLKIRQETLGDNHPKVAK 1106

Query: 198  AIRLGIGLCRYKLGQLGKARQAFQRALQLDPENV---EALVALAVMD--LQANEAAGIRK 252
            +    I L     G+   A   + ++L++  E +      VA +  D  L  N       
Sbjct: 1107 SYN-NIALVYKNQGKYDDALSMYNKSLKIRQETLGDNHPSVAESYKDIALVYNNQGKYDD 1165

Query: 253  GMEKMQRAFEI--------YPYCAMALNYLANHFFFTGQHFLVEQLTETALAV-----TN 299
             +    ++ +I        +P  A + N +A  +   G++     +   +L +      N
Sbjct: 1166 ALSMYNKSLKIRQETLGENHPNLANSYNSIALVYDHQGKYDDALSMYNKSLDIRLVTYGN 1225

Query: 300  HGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVK----EINKPHEFIF-PYYGLGQVQLK 354
            +  + + SY N+A  Y ++G Y  A   Y  S K     +   H  +   Y  +G V   
Sbjct: 1226 NHSSVADSYNNIATVYWNQGKYNDALTSYNESFKIRLATLGDNHPSVADSYNNIGGVYWN 1285

Query: 355  LGDFRSALTNFEKVLEI--------YPDNCETLKALGHIYVQLGQIEKAQELLRKAAKI- 405
             G    AL  F K LEI        +P   ++   +  +Y   G+ ++A  +  K+ KI 
Sbjct: 1286 QGKHDDALPMFNKSLEIRLKTLGDNHPSVADSYNNIASVYHHQGKYDEALSMYNKSLKIR 1345

Query: 406  -------DPRDAQAFIDLGELLISSDTGAALDAFKTARTLLK 440
                    P  A+++ ++G  L+  + G   DA       LK
Sbjct: 1346 LETHGDNHPSLAESYNNIG--LVYDNQGKHDDALSMYNKSLK 1385



 Score = 47.8 bits (112), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 83/419 (19%), Positives = 166/419 (39%), Gaps = 88/419 (21%)

Query: 113  ATQYYNKASRIDM-----HEPS---TWVGKGQLLLAKGEVEQASSAFK----IVLEADRD 160
            A   YNK+ +I +     + PS   ++   G +  ++G+ + A S +     I L    +
Sbjct: 788  ALSMYNKSLKIRLEILGENHPSLATSYNNIGGVYDSQGKYDDALSMYNKSLDIRLVTYGN 847

Query: 161  NVPALLGQ----ACVEFNRGRYSDSLEFYKRALQV--------HPSCPGAIRLGIGLCRY 208
            N P++       A V +N+G+Y+D+L  Y  + ++        H S   +    IG   +
Sbjct: 848  NHPSVADSYNNIATVYWNQGKYNDALTTYNESFKIRLATLGDNHSSVADSYN-NIGGVYW 906

Query: 209  KLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCA 268
              G+   A   F ++L++                             +++   + +P  A
Sbjct: 907  NQGKHDDALPMFNKSLEI-----------------------------RLKTLGDNHPSVA 937

Query: 269  MALNYLANHFFFTGQHFLVEQLTETALAV--TNHG---PTKSHSYYNLARSYHSKGDYEK 323
             + N +A+ +   G++     +   +L +    HG   P+ + SY N+   Y+++G Y+ 
Sbjct: 938  DSYNNIASVYHHQGKYDEALSMYNKSLKIRLETHGDNHPSLAESYNNIGGVYYNQGTYDS 997

Query: 324  AGLYYMASVK---EINKPHEFIF--PYYGLGQVQLKLGDFRSALTNFEKVLEI------- 371
            A   Y  S+    E    +       Y  +G V    G   SAL+ + K L I       
Sbjct: 998  ALSMYSKSLNITLETTGDNHLSVANSYNNIGLVYDTQGKHDSALSMYNKSLNITLETFGD 1057

Query: 372  -YPDNCETLKALGHIYVQLGQIEKAQELLRKAAKI--------DPRDAQAFIDLGELLIS 422
             +P    +   +G +Y   G+ + A  +  K+ KI         P+ A+++ ++   L+ 
Sbjct: 1058 NHPSVATSYNNIGSVYKNQGKYDDALSMYNKSLKIRQETLGDNHPKVAKSYNNIA--LVY 1115

Query: 423  SDTGAALDAFKTARTLLK----KAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDAL 475
             + G   DA       LK      G+  P   E   +I +++  +G+++ A   +  +L
Sbjct: 1116 KNQGKYDDALSMYNKSLKIRQETLGDNHPSVAESYKDIALVYNNQGKYDDALSMYNKSL 1174


>gi|88604042|ref|YP_504220.1| tetratricopeptide TPR_2 [Methanospirillum hungatei JF-1]
 gi|88189504|gb|ABD42501.1| Tetratricopeptide TPR_2 [Methanospirillum hungatei JF-1]
          Length = 576

 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 87/374 (23%), Positives = 154/374 (41%), Gaps = 58/374 (15%)

Query: 97  GKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLE 156
           G + + Q++ E+    A + Y+ A +ID     TW  KG     +   ++A SA++I L+
Sbjct: 136 GNVLSDQKQYED----AIRAYDAAIQIDPDNEETWFAKGNAHYNQENFKEAVSAYEIALQ 191

Query: 157 ADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKA 216
            D  +  A   +   ++N G   D+L+ Y+ AL  +P    A     G+    L +   A
Sbjct: 192 KDSKDSKAWYNKGNAQYNLGNLEDALKSYEMALAYNPKDAIAYT-NKGMALADLERYDDA 250

Query: 217 RQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLAN 276
             A++ AL LD  +++A  +L  +  +  E        +   RAF++    A+ LN   +
Sbjct: 251 IDAYEAALSLDATDLKAWTSLGQVYTKLRE-------YDNAVRAFQM----ALKLNKTDS 299

Query: 277 HFFFT-GQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKA-GLYYMASVKE 334
             +   G   ++E+  + ALA                        YE+A  L  M S   
Sbjct: 300 SVWKNIGDVLMLEKRYDEALAA-----------------------YEQAIALNRMDSSAW 336

Query: 335 INKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK 394
           I K           G     L  ++ AL  FE    + P         G+    LGQI++
Sbjct: 337 IGK-----------GTALNNLARYKEALGVFEIACSMSPLFASGWVGKGNSLSGLGQIQE 385

Query: 395 AQELLRKAAKIDPRDAQAFIDLGELLISS-DTGAALDAFKTARTLLKKAGEEVPIEVLNN 453
           A      A ++DPR++QA     + L+++ D   AL + +     L  A +   + +L  
Sbjct: 386 ADGAYEAALQLDPRNSQALAGKSKNLVTTGDPETALQSLQ-----LAIAADPTNMALLGR 440

Query: 454 IGVIHFEKGEFESA 467
           +  I+ + G ++ A
Sbjct: 441 LAEIYEKMGRYQDA 454



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 69/286 (24%), Positives = 124/286 (43%), Gaps = 22/286 (7%)

Query: 93  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 152
           +T LG++ TK RE +     A + +  A +++  + S W   G +L+ +   ++A +A++
Sbjct: 268 WTSLGQVYTKLREYDN----AVRAFQMALKLNKTDSSVWKNIGDVLMLEKRYDEALAAYE 323

Query: 153 IVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQ 212
             +  +R +  A +G+     N  RY ++L  ++ A  + P       +G G     LGQ
Sbjct: 324 QAIALNRMDSSAWIGKGTALNNLARYKEALGVFEIACSMSPLFASGW-VGKGNSLSGLGQ 382

Query: 213 LGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALN 272
           + +A  A++ ALQLDP N +AL   +   +   +       ++ +Q A    P     L 
Sbjct: 383 IQEADGAYEAALQLDPRNSQALAGKSKNLVTTGDP---ETALQSLQLAIAADPTNMALLG 439

Query: 273 YLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHS----KGDYEKAGLYY 328
            LA  +   G++       + AL V N   + + S  NL R   +    +   E   L  
Sbjct: 440 RLAEIYEKMGRY-------QDALDVWNS-VSLNESDPNLVRKGKAMTLVRAGREAEALAL 491

Query: 329 MASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPD 374
              V   ++   F++  YG   V    GD   A   + K +EI P+
Sbjct: 492 YRDVLGSDQQSGFVYEQYG--DVLALAGDTPGAEHAYRKAMEIQPN 535



 Score = 59.7 bits (143), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 69/322 (21%), Positives = 140/322 (43%), Gaps = 23/322 (7%)

Query: 162 VPALLGQA-------CVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLG 214
           VPAL  Q+        V +++G Y +++ +++RA++  PS   A     G+  YKLGQ+ 
Sbjct: 20  VPALATQSDDLISDGNVLYSQGMYQEAISYFERAIEQDPSNAAAW-YNKGVSLYKLGQVD 78

Query: 215 KARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYL 274
           +A  +++ A+ LDP N +         L  N    + +       A ++ PY   A    
Sbjct: 79  EAIASYEVAIGLDPRNSDYWYNKGNALLSKNL---LNEAYAAYDVAIQLDPYDVQAWMAK 135

Query: 275 ANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKE 334
            N      Q+    +  + A+ +    P    +++    +++++ ++++A   Y  ++++
Sbjct: 136 GNVLSDQKQYEDAIRAYDAAIQID---PDNEETWFAKGNAHYNQENFKEAVSAYEIALQK 192

Query: 335 INKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK 394
            +K  +    +Y  G  Q  LG+   AL ++E  L   P +       G     L + + 
Sbjct: 193 DSKDSK---AWYNKGNAQYNLGNLEDALKSYEMALAYNPKDAIAYTNKGMALADLERYDD 249

Query: 395 AQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGEEVPIEVLNN 453
           A +    A  +D  D +A+  LG++     +   A+ AF+ A  L K         V  N
Sbjct: 250 AIDAYEAALSLDATDLKAWTSLGQVYTKLREYDNAVRAFQMALKLNK-----TDSSVWKN 304

Query: 454 IGVIHFEKGEFESAHQSFKDAL 475
           IG +   +  ++ A  +++ A+
Sbjct: 305 IGDVLMLEKRYDEALAAYEQAI 326



 Score = 44.7 bits (104), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 61/310 (19%), Positives = 119/310 (38%), Gaps = 46/310 (14%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
           A  Y+ +A   D    + W  KG  L   G+V++A +++++ +  D  N      +    
Sbjct: 46  AISYFERAIEQDPSNAAAWYNKGVSLYKLGQVDEAIASYEVAIGLDPRNSDYWYNKGNAL 105

Query: 173 FNRGRYSDSLEFYKRALQVHP-SCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENV 231
            ++   +++   Y  A+Q+ P      +  G  L   K  Q   A +A+  A+Q+DP+N 
Sbjct: 106 LSKNLLNEAYAAYDVAIQLDPYDVQAWMAKGNVLSDQK--QYEDAIRAYDAAIQIDPDNE 163

Query: 232 EALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLT 291
           E   A                  E  + A   Y                      +++ +
Sbjct: 164 ETWFA----------KGNAHYNQENFKEAVSAY-------------------EIALQKDS 194

Query: 292 ETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQV 351
           + + A  N G    ++ YNL     +   YE A  Y          P + I  Y   G  
Sbjct: 195 KDSKAWYNKG----NAQYNLGNLEDALKSYEMALAY---------NPKDAI-AYTNKGMA 240

Query: 352 QLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQ 411
              L  +  A+  +E  L +   + +   +LG +Y +L + + A    + A K++  D+ 
Sbjct: 241 LADLERYDDAIDAYEAALSLDATDLKAWTSLGQVYTKLREYDNAVRAFQMALKLNKTDSS 300

Query: 412 AFIDLGELLI 421
            + ++G++L+
Sbjct: 301 VWKNIGDVLM 310


>gi|428311655|ref|YP_007122632.1| hypothetical protein Mic7113_3500 [Microcoleus sp. PCC 7113]
 gi|428253267|gb|AFZ19226.1| TPR repeat-containing protein [Microcoleus sp. PCC 7113]
          Length = 847

 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 56/236 (23%), Positives = 107/236 (45%), Gaps = 26/236 (11%)

Query: 117 YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 176
           ++KA ++D +EP  W  +G  L      E+A ++F   LE + +       +     N G
Sbjct: 473 FSKAIKLDPNEPIAWFNRGIALRCLERYEEALASFNKGLELNPNESITWRNRGATLGNLG 532

Query: 177 RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVA 236
           R+ D+L  Y +A+++ P+   A+ +  G     LG+  +A  ++ +A++LDP N  AL+ 
Sbjct: 533 RHEDALISYDKAIELEPANANAL-INRGAALGNLGRYEEALVSYDKAIELDPTNANALIN 591

Query: 237 LAVMDLQANEAAGIRKGMEKM---QRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTET 293
             V+       + +R+  E +    +A E+ P   +  NY         Q +++ QL   
Sbjct: 592 QGVV------FSKLRRYNEALVCADKAIELDPNYGLVWNY---------QGWVLGQLERY 636

Query: 294 ALAVTNH------GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIF 343
             A+T++       PT +  ++N        G Y++ GL       E+ +   F+F
Sbjct: 637 DEALTSYDKAIELDPTDADGWFNRGWLLGELGSYDE-GLESCDKAIELGEQSSFVF 691



 Score = 50.1 bits (118), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 81/354 (22%), Positives = 144/354 (40%), Gaps = 80/354 (22%)

Query: 92  YYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAF 151
           YY YL         +EE+F  A Q   +   I  H    W+ +G  L   G +E+A ++F
Sbjct: 424 YYAYL---------EEENFAQALQIAQELVAIRGH-IEDWLEQGYCLGVLGRIEEALASF 473

Query: 152 KIVLEADRDNVPALLGQACVEFNRG-------RYSDSLEFYKRALQVHPSCPGAIRLGIG 204
              ++ D +   A        FNRG       RY ++L  + + L+++P+     R   G
Sbjct: 474 SKAIKLDPNEPIAW-------FNRGIALRCLERYEEALASFNKGLELNPNESITWR-NRG 525

Query: 205 LCRYKLGQLGKARQAFQRALQLDPENVEALV--ALAVMDLQANEAAGIRKGMEKMQRAFE 262
                LG+   A  ++ +A++L+P N  AL+    A+ +L   E A +        +A E
Sbjct: 526 ATLGNLGRHEDALISYDKAIELEPANANALINRGAALGNLGRYEEALV-----SYDKAIE 580

Query: 263 IYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYE 322
           + P  A AL                           N G       ++  R Y+      
Sbjct: 581 LDPTNANAL--------------------------INQGVV-----FSKLRRYNE----- 604

Query: 323 KAGLYYMASVKEINKPHEFIFPYYG--LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLK 380
              L       E++  +  ++ Y G  LGQ++     +  ALT+++K +E+ P + +   
Sbjct: 605 --ALVCADKAIELDPNYGLVWNYQGWVLGQLE----RYDEALTSYDKAIELDPTDADGWF 658

Query: 381 ALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS----SDTGAALD 430
             G +  +LG  ++  E   KA ++  + +  F++  E L++     D  AALD
Sbjct: 659 NRGWLLGELGSYDEGLESCDKAIELGEQSSFVFLNRAEYLLALNRWEDGIAALD 712


>gi|268323937|emb|CBH37525.1| conserved hypothetical protein, tetratricopeptide repeat family
           [uncultured archaeon]
          Length = 529

 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 73/309 (23%), Positives = 135/309 (43%), Gaps = 17/309 (5%)

Query: 131 WVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQ 190
           W+ KG  L+ + + E+A  A++  +  +  +  A  G+     +  R  D+LE Y++A+ 
Sbjct: 14  WLEKGDDLIKRKKYEKALKAYEKAIVINPQHAKAWNGKGVALDDLKRNEDALEAYEKAID 73

Query: 191 VHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGI 250
           ++P    A     G     L +   A  AF++A++++P+  E      V + + N   G+
Sbjct: 74  INPDFAEAWN-NKGSALDDLKRHENALNAFEKAIEINPDFAE------VWNGKGNALYGL 126

Query: 251 RK---GMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHS 307
           ++    +   ++A EI P  A A N   +      ++    +  + AL +    P     
Sbjct: 127 KRYENALNAFEKAIEINPDFAEAWNGKGSALDDLERYEDALKAYDKALEIN---PLFPEV 183

Query: 308 YYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEK 367
           + N   +      YE+A   +  ++ EIN   E+   + G G     L  +  ALT +EK
Sbjct: 184 WNNKGYTLGQLKRYEEALNAFEGAI-EIN--SEYAAAWNGKGIALCTLERYEEALTAYEK 240

Query: 368 VLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLI-SSDTG 426
            +E  P++       G +Y  LG ++ A E +  A   D   A A +  GE+ I   D  
Sbjct: 241 AIEKGPEDVRPYSNSGELYFNLGDLKSASEKMEGALTKDKTFASALMLKGEIEIEKKDWD 300

Query: 427 AALDAFKTA 435
           +A  +F+ A
Sbjct: 301 SANKSFEAA 309



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 45/162 (27%), Positives = 72/162 (44%), Gaps = 13/162 (8%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
           A   + KA  I+      W GKG  L      E A +AF+  +E + D   A  G+    
Sbjct: 98  ALNAFEKAIEINPDFAEVWNGKGNALYGLKRYENALNAFEKAIEINPDFAEAWNGKGSAL 157

Query: 173 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGK---ARQAFQRALQLDPE 229
            +  RY D+L+ Y +AL+++P  P  +    G   Y LGQL +   A  AF+ A++++ E
Sbjct: 158 DDLERYEDALKAYDKALEINPLFP-EVWNNKG---YTLGQLKRYEEALNAFEGAIEINSE 213

Query: 230 NVEAL----VALAVMDLQANEAAGIRKGMEKMQRAFEIYPYC 267
              A     +AL  ++          K +EK     ++ PY 
Sbjct: 214 YAAAWNGKGIALCTLERYEEALTAYEKAIEKGPE--DVRPYS 253



 Score = 41.2 bits (95), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 38/155 (24%), Positives = 66/155 (42%), Gaps = 5/155 (3%)

Query: 108 EHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLG 167
           E +  A + Y+KA  I+   P  W  KG  L      E+A +AF+  +E + +   A  G
Sbjct: 161 ERYEDALKAYDKALEINPLFPEVWNNKGYTLGQLKRYEEALNAFEGAIEINSEYAAAWNG 220

Query: 168 QACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL--GIGLCRYKLGQLGKARQAFQRALQ 225
           +        RY ++L  Y++A++     P  +R     G   + LG L  A +  + AL 
Sbjct: 221 KGIALCTLERYEEALTAYEKAIE---KGPEDVRPYSNSGELYFNLGDLKSASEKMEGALT 277

Query: 226 LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRA 260
            D     AL+    ++++  +     K  E   R+
Sbjct: 278 KDKTFASALMLKGEIEIEKKDWDSANKSFEAAIRS 312



 Score = 41.2 bits (95), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 30/116 (25%), Positives = 54/116 (46%), Gaps = 1/116 (0%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
           A + Y KA  I+      W  KG  L      E A +AF+  +E + D      G+    
Sbjct: 64  ALEAYEKAIDINPDFAEAWNNKGSALDDLKRHENALNAFEKAIEINPDFAEVWNGKGNAL 123

Query: 173 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDP 228
           +   RY ++L  +++A++++P    A   G G     L +   A +A+ +AL+++P
Sbjct: 124 YGLKRYENALNAFEKAIEINPDFAEAWN-GKGSALDDLERYEDALKAYDKALEINP 178


>gi|195382543|ref|XP_002049989.1| GJ20442 [Drosophila virilis]
 gi|194144786|gb|EDW61182.1| GJ20442 [Drosophila virilis]
          Length = 1050

 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 99/454 (21%), Positives = 188/454 (41%), Gaps = 25/454 (5%)

Query: 158 DRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKAR 217
           D  N   LL  + + F   R   S +F   A++ +P    A    +G    + GQL +A 
Sbjct: 71  DSTNTGVLLLLSSIHFQCRRLDKSAQFSTLAIKQNPVLAEAYS-NLGNVYKERGQLQEAL 129

Query: 218 QAFQRALQLDPENVEALVALAVMDLQANEA-AGIRKGMEKMQRAFEIYPYCAMALNYLAN 276
             ++RA++L P+ ++  + LA   + A +  + ++  +  +Q   E+Y  C  +   L N
Sbjct: 130 DNYRRAVRLKPDFIDGYINLAAALVAARDMESAVQAYITALQYNPELY--CVRS--DLGN 185

Query: 277 HFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEIN 336
                G+   +E+     L      P  + ++ NL   ++++G+   A  ++    K + 
Sbjct: 186 LLKALGR---LEEAKACYLKAIETCPGFAVAWSNLGCVFNAQGEIWLAIHHFE---KAVT 239

Query: 337 KPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQ 396
               F+  Y  LG V  +   F  A+  + + L + P+N      L  +Y + G I+ A 
Sbjct: 240 LDPNFLDAYINLGNVLKEARIFDRAVAAYLRALNLSPNNAVVHGNLACVYYEQGLIDLAI 299

Query: 397 ELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGV 456
           +  R+A ++ P    A+ +L   L   + G   +A +   T L+        + LNN+  
Sbjct: 300 DTYRRAIELQPNFPDAYCNLANAL--KEKGQVKEAEECYNTALRLCSNHA--DSLNNLAN 355

Query: 457 IHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGN 516
           I  E+G  E A + +  AL   ++     + +        AS+LQ +  +L     +   
Sbjct: 356 IKREQGFIEEATRLYLKAL--EVFPDFAAAHSNL------ASVLQ-QQGKLKEALMHYKE 406

Query: 517 HVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQ 576
            + +         N+   L+++ D   A   Y   +     + DA+  LA+I K   N+ 
Sbjct: 407 AIRIQPTFADAYSNMGNTLKELQDVSGALQCYTRAIQINPAFADAHSNLASIHKDSGNIP 466

Query: 577 LSIELVNEALKVNGKYPNALSMLGDLELKNDDWV 610
            +I+    ALK+   +P+A   L        DW 
Sbjct: 467 EAIQSYRTALKLKPDFPDAYCNLAHCLQIVCDWT 500



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 86/388 (22%), Positives = 164/388 (42%), Gaps = 28/388 (7%)

Query: 93  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 152
           Y+ LG +  ++ + +E    A   Y +A R+       ++     L+A  ++E A  A+ 
Sbjct: 112 YSNLGNVYKERGQLQE----ALDNYRRAVRLKPDFIDGYINLAAALVAARDMESAVQAYI 167

Query: 153 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPG--AIRLGIGLCRY 208
             L+ + +   V + LG        GR  ++   Y +A++   +CPG       +G    
Sbjct: 168 TALQYNPELYCVRSDLGNLLKAL--GRLEEAKACYLKAIE---TCPGFAVAWSNLGCVFN 222

Query: 209 KLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCA 268
             G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A
Sbjct: 223 AQGEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAAYLRALNLSPNNA 279

Query: 269 MALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYY 328
           +    LA  ++  G   L++   +T        P    +Y NLA +   KG  ++A   Y
Sbjct: 280 VVHGNLACVYYEQG---LIDLAIDTYRRAIELQPNFPDAYCNLANALKEKGQVKEAEECY 336

Query: 329 MASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQ 388
             +++  +   + +     L  ++ + G    A   + K LE++PD       L  +  Q
Sbjct: 337 NTALRLCSNHADSL---NNLANIKREQGFIEEATRLYLKALEVFPDFAAAHSNLASVLQQ 393

Query: 389 LGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGEEVP 447
            G++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +         
Sbjct: 394 QGKLKEALMHYKEAIRIQPTFADAYSNMGNTLKELQDVSGALQCYTRAIQINPAFA---- 449

Query: 448 IEVLNNIGVIHFEKGEFESAHQSFKDAL 475
            +  +N+  IH + G    A QS++ AL
Sbjct: 450 -DAHSNLASIHKDSGNIPEAIQSYRTAL 476



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 73/338 (21%), Positives = 135/338 (39%), Gaps = 48/338 (14%)

Query: 83  IAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKG 142
           I       V ++ LG +   Q E      LA  ++ KA  +D +    ++  G +L    
Sbjct: 204 IETCPGFAVAWSNLGCVFNAQGE----IWLAIHHFEKAVTLDPNFLDAYINLGNVLKEAR 259

Query: 143 EVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLG 202
             ++A +A+   L    +N       ACV + +G    +++ Y+RA+++ P+ P A    
Sbjct: 260 IFDRAVAAYLRALNLSPNNAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPNFPDAY-CN 318

Query: 203 IGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFE 262
           +     + GQ+ +A + +  AL+L   + ++L  LA +     E   I +      +A E
Sbjct: 319 LANALKEKGQVKEAEECYNTALRLCSNHADSLNNLANIK---REQGFIEEATRLYLKALE 375

Query: 263 IYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYE 322
           ++P  A A                                   HS  NLA     +G  +
Sbjct: 376 VFPDFAAA-----------------------------------HS--NLASVLQQQGKLK 398

Query: 323 KAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKAL 382
           +A ++Y  +++   +P  F   Y  +G    +L D   AL  + + ++I P   +    L
Sbjct: 399 EALMHYKEAIRI--QP-TFADAYSNMGNTLKELQDVSGALQCYTRAIQINPAFADAHSNL 455

Query: 383 GHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 420
             I+   G I +A +  R A K+ P    A+ +L   L
Sbjct: 456 ASIHKDSGNIPEAIQSYRTALKLKPDFPDAYCNLAHCL 493


>gi|253996282|ref|YP_003048346.1| hypothetical protein Mmol_0910 [Methylotenera mobilis JLW8]
 gi|253982961|gb|ACT47819.1| TPR repeat-containing protein [Methylotenera mobilis JLW8]
          Length = 1673

 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 86/374 (22%), Positives = 160/374 (42%), Gaps = 31/374 (8%)

Query: 43  WLIIAREYFKQGKVEQFRQILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETK 102
           W ++   Y  QG V+   Q L+  +    D+Y  +V+Y               LG     
Sbjct: 48  WKVLGAIYQNQGAVDLALQALKNAAQFLADDY--EVQYN--------------LGNCFYD 91

Query: 103 QREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNV 162
           Q++ E     A   Y KA +++          G     +  +EQA  ++K  L  D +N+
Sbjct: 92  QQQLEA----AVSCYQKAIQLNPGFAQAHYNLGNAFKNQELLEQAELSYKNALRFDANNI 147

Query: 163 PALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQR 222
                 A V +  GR++++  +Y++AL + P    A  +G+      LG+L +A   F++
Sbjct: 148 WIFDNLAHVLYELGRFAEAKVYYEQALAIQPDFVAA-HIGLAAVAKALGRLQEAEDGFKK 206

Query: 223 ALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTG 282
           A+++  E  EA   LA + L A+    + +    +Q A   YP    A   +A      G
Sbjct: 207 AIEIGAE-FEAYGNLADL-LHAD--GRLTEAEACLQAAITTYPQSVDAQVKMAVFLRTLG 262

Query: 283 QHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFI 342
           +          AL++     T+   Y +L  +   +G + +A + Y    + +    ++ 
Sbjct: 263 RVPESIPYFTQALSIDQ---TRKDVYVDLGLAKAEQGFFSEAEVCYR---RALELAPDYW 316

Query: 343 FPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKA 402
             Y  LG    ++  ++ A   F++ ++++P+       LG     LGQI++A+ +L KA
Sbjct: 317 LAYNNLGLALHRMERYQEAEQAFDQAIKLHPEEALLYSNLGLTLAALGQIKRAEAMLLKA 376

Query: 403 AKIDPRDAQAFIDL 416
            +I P    A I+L
Sbjct: 377 IEIMPEYVNAHINL 390


>gi|399023126|ref|ZP_10725193.1| cytochrome c biogenesis factor [Chryseobacterium sp. CF314]
 gi|398083685|gb|EJL74390.1| cytochrome c biogenesis factor [Chryseobacterium sp. CF314]
          Length = 237

 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 58/188 (30%), Positives = 87/188 (46%), Gaps = 18/188 (9%)

Query: 282 GQHFLVEQLTETAL----AVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINK 337
           G +FL+E     A     +     P  +++YY LA +Y   GD  KA  Y+  S+ E+N 
Sbjct: 30  GNNFLLESDFRNAQKEFESSIQKDPNNANAYYGLALTYSVAGDNSKAIDYFTKSI-ELN- 87

Query: 338 PHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQE 397
             +F   Y   G + L  GDFR A  +F KV+ + PD       LG I +Q    ++A  
Sbjct: 88  -SDFTLAYAERGTLYLNSGDFRQAKKDFNKVVTLAPDLVVPYLYLGQIEIQNSNYQEAIS 146

Query: 398 LLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVI 457
              +  K DP++A A++  G   IS  T      +K A + + K+ E  P    N I  +
Sbjct: 147 NFEEVLKRDPKNATAYLSKG---ISEGTQG---DYKNAISSITKSIELNP---KNAIAYV 197

Query: 458 HFEKGEFE 465
           +  KG FE
Sbjct: 198 Y--KGTFE 203


>gi|166365801|ref|YP_001658074.1| serine/threonine protein kinase [Microcystis aeruginosa NIES-843]
 gi|166088174|dbj|BAG02882.1| serine/threonine protein kinase [Microcystis aeruginosa NIES-843]
          Length = 707

 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 85/351 (24%), Positives = 156/351 (44%), Gaps = 31/351 (8%)

Query: 134 KGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHP 193
           +GQ          A +++   L+ + D + AL G+A       RYS++L  Y++A+Q++P
Sbjct: 338 QGQTFYQLKRYTDALNSYGQALKINPDYLEALQGKADALLALKRYSEALNTYEKAIQINP 397

Query: 194 SCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKG 253
                  LG G    KLG+  +A ++F R L  +P   +A    A + L+  + +  +K 
Sbjct: 398 DSAWQAWLGRGQALDKLGKNQEALESFDRVLSFNPAASQAWQGKADIYLELQQYSAAQKA 457

Query: 254 MEKM----QRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGP----TKS 305
           +EK+    Q   +I+     +L  L +   + G     +Q    ALA+ +        K+
Sbjct: 458 LEKLLTFQQNDAKIWYKKGWSLQNLED---YEGAVKAYDQ----ALALESDNALIWYQKA 510

Query: 306 HSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNF 365
           +S Y L +   +   Y KAG +          P +F   +Y  G +  KLG    AL  F
Sbjct: 511 NSLYQLNKINDALESYSKAGQF---------NP-QFSQAHYSQGIILQKLGRKSEALEAF 560

Query: 366 EKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SD 424
            +  +   +  +     G +  Q+ + ++A     KA +I  + A+ FI +G       D
Sbjct: 561 TQATKANSNYYQAWLNQGALLHQMERFQEAIASYEKARRISSQKAEVFIGIGNAWYRLGD 620

Query: 425 TGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
              A+ A++ A    K    + P E   ++G   F+ G++E A Q+++++L
Sbjct: 621 YSQAIIAYQQAIQRQK----DNP-ETWKSLGNSCFKLGQYERAIQAYQESL 666



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 74/302 (24%), Positives = 127/302 (42%), Gaps = 41/302 (13%)

Query: 117 YNKASRIDMHEP-STWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNR 175
           Y KA +I+       W+G+GQ L   G+ ++A  +F  VL  +     A  G+A +    
Sbjct: 389 YEKAIQINPDSAWQAWLGRGQALDKLGKNQEALESFDRVLSFNPAASQAWQGKADIYLEL 448

Query: 176 GRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV 235
            +YS + +  ++ L    +    I    G     L     A +A+ +AL L+ +N     
Sbjct: 449 QQYSAAQKALEKLLTFQQN-DAKIWYKKGWSLQNLEDYEGAVKAYDQALALESDNALIWY 507

Query: 236 ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQL---TE 292
             A    Q N+   I   +E   +A +  P  + A      H+    Q  ++++L   +E
Sbjct: 508 QKANSLYQLNK---INDALESYSKAGQFNPQFSQA------HY---SQGIILQKLGRKSE 555

Query: 293 TALAVTNHGPTKSHSY----------YNLARSYHSKGDYEKAGLYYMASVKEINKPHEFI 342
              A T      S+ Y          + + R   +   YEKA        + I+     +
Sbjct: 556 ALEAFTQATKANSNYYQAWLNQGALLHQMERFQEAIASYEKA--------RRISSQKAEV 607

Query: 343 FPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKA----QEL 398
           F   G+G    +LGD+  A+  +++ ++   DN ET K+LG+   +LGQ E+A    QE 
Sbjct: 608 F--IGIGNAWYRLGDYSQAIIAYQQAIQRQKDNPETWKSLGNSCFKLGQYERAIQAYQES 665

Query: 399 LR 400
           LR
Sbjct: 666 LR 667


>gi|164687574|ref|ZP_02211602.1| hypothetical protein CLOBAR_01215 [Clostridium bartlettii DSM
           16795]
 gi|164603348|gb|EDQ96813.1| tetratricopeptide repeat protein [Clostridium bartlettii DSM 16795]
          Length = 523

 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 73/333 (21%), Positives = 144/333 (43%), Gaps = 26/333 (7%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
           A + Y KA  +D ++ S +  +G++L   G  ++A   F   +  ++ +   L  +A + 
Sbjct: 203 AMESYRKALELDENDVSAYYNRGRILAYLGRYKEALKDFTNAINLEKYDERLLYERAGIF 262

Query: 173 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 232
           +   +Y D+L  YK  + + P       LG+  C  ++ Q+  A + + +++++DP   E
Sbjct: 263 YLMKKYKDALLDYKAFVNLAPHMKEGY-LGMADCYCQMNQMNNAIEYYNKSIEIDPNYEE 321

Query: 233 ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYP-----YCAMALNY--LANHFFFTGQHF 285
           +    +V  L+ ++   +RK ++ + +   + P     Y   AL Y  + NH        
Sbjct: 322 SYFNRSVAYLKQDD---LRKAIKDLDKVIGLNPKNGEAYYNRALAYGRIENH-------- 370

Query: 286 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 345
             + + + + A+   G     SY N  + Y   G+++KA   Y  S++     ++    Y
Sbjct: 371 -TKVIRDFSKAIK-MGYKVGKSYCNRGKEYSLTGNFKKAKDDYTRSIEH---GYDSYIVY 425

Query: 346 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKI 405
            G G   L L ++  A+ +F K +E+           G  Y  L Q ++A +    A + 
Sbjct: 426 MGRGAANLDLEEYNEAILDFNKAIELDNTKLGNYYYRGLAYYNLKQYKEAIDDFSVAIEG 485

Query: 406 DPRDAQAFIDLGELL--ISSDTGAALDAFKTAR 436
            P D +A+   G+    I     A  D F  +R
Sbjct: 486 CPSDIRAYEKRGDAYCRIGDYDNAIKDFFMISR 518



 Score = 48.5 bits (114), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 57/117 (48%), Gaps = 4/117 (3%)

Query: 308 YYNLARSYHSKGDYEKAGLYYMASVKEINK----PHEFIFPYYGLGQVQLKLGDFRSALT 363
           Y + A  Y+ +GD+      + +++K+  K       +   Y G G    +LGD   A+ 
Sbjct: 112 YDDCADGYYYRGDFYIKFEKFYSAIKDFEKVIQLDKNYKEAYRGKGVCYSRLGDNDLAIK 171

Query: 364 NFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 420
           N+EK L+I P+       LG  Y  L + +KA E  RKA ++D  D  A+ + G +L
Sbjct: 172 NYEKALQIDPNYEVAYYNLGVSYSNLKEYDKAMESYRKALELDENDVSAYYNRGRIL 228



 Score = 44.7 bits (104), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 64/278 (23%), Positives = 118/278 (42%), Gaps = 48/278 (17%)

Query: 177 RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVA 236
           ++  +++ +++ +Q+  +   A R G G+C  +LG    A + +++ALQ+DP N E  VA
Sbjct: 131 KFYSAIKDFEKVIQLDKNYKEAYR-GKGVCYSRLGDNDLAIKNYEKALQIDP-NYE--VA 186

Query: 237 LAVMDLQANEAAGIRKGMEKMQRAFEI-------YPYCAMALNYLANH------------ 277
              + +  +      K ME  ++A E+       Y      L YL  +            
Sbjct: 187 YYNLGVSYSNLKEYDKAMESYRKALELDENDVSAYYNRGRILAYLGRYKEALKDFTNAIN 246

Query: 278 ---------FFFTGQHFLVEQLTETAL---AVTNHGPTKSHSYYNLARSYHSKGDYEKAG 325
                    +   G  +L+++  +  L   A  N  P     Y  +A  Y        A 
Sbjct: 247 LEKYDERLLYERAGIFYLMKKYKDALLDYKAFVNLAPHMKEGYLGMADCYCQMNQMNNAI 306

Query: 326 LYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL--KALG 383
            YY  S+ EI+  +E    Y+      LK  D R A+ + +KV+ + P N E    +AL 
Sbjct: 307 EYYNKSI-EIDPNYE--ESYFNRSVAYLKQDDLRKAIKDLDKVIGLNPKNGEAYYNRALA 363

Query: 384 HIYVQLGQIEKAQELLR---KAAKIDPRDAQAFIDLGE 418
           +     G+IE   +++R   KA K+  +  +++ + G+
Sbjct: 364 Y-----GRIENHTKVIRDFSKAIKMGYKVGKSYCNRGK 396



 Score = 43.5 bits (101), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 36/132 (27%), Positives = 64/132 (48%), Gaps = 6/132 (4%)

Query: 345 YYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAK 404
           YY  G   +K   F SA+ +FEKV+++  +  E  +  G  Y +LG  + A +   KA +
Sbjct: 119 YYYRGDFYIKFEKFYSAIKDFEKVIQLDKNYKEAYRGKGVCYSRLGDNDLAIKNYEKALQ 178

Query: 405 IDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGE 463
           IDP    A+ +LG    +  +   A+++++ A  L     +E  +    N G I    G 
Sbjct: 179 IDPNYEVAYYNLGVSYSNLKEYDKAMESYRKALEL-----DENDVSAYYNRGRILAYLGR 233

Query: 464 FESAHQSFKDAL 475
           ++ A + F +A+
Sbjct: 234 YKEALKDFTNAI 245


>gi|451982186|ref|ZP_21930513.1| exported hypothetical protein, contains TPR repeats [Nitrospina
           gracilis 3/211]
 gi|451760606|emb|CCQ91795.1| exported hypothetical protein, contains TPR repeats [Nitrospina
           gracilis 3/211]
          Length = 755

 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 114/495 (23%), Positives = 193/495 (38%), Gaps = 75/495 (15%)

Query: 151 FKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 210
           ++  L+ D ++  A  G        G Y  ++  +K+ L+V P   GA    IG    +L
Sbjct: 42  YRDALKVDPNDYIAHFGLGRAYAQIGLYDKAIAEFKKVLEVEPLYSGAY-YQIGEAHSQL 100

Query: 211 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 270
           G   +A +AF+ A+ LDP   +A   L   +L+          ++K + A E        
Sbjct: 101 GHTKEAAEAFREAVLLDPNFADAQFGLGYANLE----------LKKYEEALE-------- 142

Query: 271 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 330
             +L N                         P    +++ L R+Y     + +A   Y+ 
Sbjct: 143 --HLTNSLRIN--------------------PGMPRAHFALGRTYAETDRHTEAIPEYLI 180

Query: 331 SVKEINKPH-EFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQL 389
           ++ E++  H E+ F    L +    L  F SA++ +++ L++  +  +   A+G I V  
Sbjct: 181 AL-ELSPLHPEWRF---ALAKSMEALSQFDSAISQYKQTLDLNSNFADAYAAIGRIRVAT 236

Query: 390 GQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPIE 449
           GQ++KA E L  A +IDP++A A   LG  L  S  G   +A    + L     ++    
Sbjct: 237 GQLKKALEPLENALRIDPQNALALEYLGRAL--SRMGKHREAMLAFKELTFVQPQQAKSH 294

Query: 450 VLNNIGVIHFEKGEFESAHQSFKDAL-----------GDGIWLTLLDSKTKTYVIDASAS 498
               +G  + E G+  +A +SF++AL             G  L  L    K  V      
Sbjct: 295 Y--QLGREYLELGQLVNARESFENALRFDSNNLDIRFHLGQTLENLGQMEKAIVEYMRVL 352

Query: 499 MLQFKDMQLFHRF--------------ENDGNHVELPWNKVTVLFNLARLLEQIHDTVAA 544
            L  K ++  HR               E   N + L      V   LAR  E+++    A
Sbjct: 353 NLNPKHVRAHHRIADLSLLQENYHRAAEEFENVLRLDPENGPVQLKLARAYEELNRWQDA 412

Query: 545 SVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLEL 604
              Y+  L  + D V+ +  L        N + +I  + E L+ +     A   LGD  +
Sbjct: 413 ISAYQKSLRFFPDSVEIWQSLGNTQWQLGNYRAAIVPLRETLRRDPGRSQAWMFLGDALM 472

Query: 605 KNDDWVKAKETFRAA 619
           + D   KA   F+ A
Sbjct: 473 QLDQLKKAVIPFKKA 487



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 111/494 (22%), Positives = 176/494 (35%), Gaps = 152/494 (30%)

Query: 111 ILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEA------------- 157
            L  Q Y  A ++D ++     G G+     G  ++A + FK VLE              
Sbjct: 36  FLHMQEYRDALKVDPNDYIAHFGLGRAYAQIGLYDKAIAEFKKVLEVEPLYSGAYYQIGE 95

Query: 158 ---------------------DRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCP 196
                                D +   A  G         +Y ++LE    +L+++P  P
Sbjct: 96  AHSQLGHTKEAAEAFREAVLLDPNFADAQFGLGYANLELKKYEEALEHLTNSLRINPGMP 155

Query: 197 GAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA------------------ 238
            A    +G    +  +  +A   +  AL+L P + E   ALA                  
Sbjct: 156 RA-HFALGRTYAETDRHTEAIPEYLIALELSPLHPEWRFALAKSMEALSQFDSAISQYKQ 214

Query: 239 VMDLQANEA-------------AGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 285
            +DL +N A               ++K +E ++ A  I P  A+AL YL       G+H 
Sbjct: 215 TLDLNSNFADAYAAIGRIRVATGQLKKALEPLENALRIDPQNALALEYLGRALSRMGKH- 273

Query: 286 LVEQLTETALA---VTNHGPTKSHSYYNLARSY--------------------------- 315
                 E  LA   +T   P ++ S+Y L R Y                           
Sbjct: 274 -----REAMLAFKELTFVQPQQAKSHYQLGREYLELGQLVNARESFENALRFDSNNLDIR 328

Query: 316 -------HSKGDYEKAGLYYMASVKEINKPH----------------------EF----- 341
                   + G  EKA + YM  V  +N  H                      EF     
Sbjct: 329 FHLGQTLENLGQMEKAIVEYM-RVLNLNPKHVRAHHRIADLSLLQENYHRAAEEFENVLR 387

Query: 342 IFPYYGLGQVQL-----KLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQ 396
           + P  G  Q++L     +L  ++ A++ ++K L  +PD+ E  ++LG+   QLG    A 
Sbjct: 388 LDPENGPVQLKLARAYEELNRWQDAISAYQKSLRFFPDSVEIWQSLGNTQWQLGNYRAAI 447

Query: 397 ELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKA---GEEVPIEVLNN 453
             LR+  + DP  +QA++ LG+ L+       LD  K A    KKA     E+P +    
Sbjct: 448 VPLRETLRRDPGRSQAWMFLGDALMQ------LDQLKKAVIPFKKALQLNPELP-QADFG 500

Query: 454 IGVIHFEKGEFESA 467
           +G+I    G  E A
Sbjct: 501 LGIILTRLGRHEQA 514



 Score = 56.2 bits (134), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 73/330 (22%), Positives = 139/330 (42%), Gaps = 23/330 (6%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEAD--RDNVPALLGQAC 170
           A   Y K+ R        W   G      G    A    +  L  D  R      LG A 
Sbjct: 412 AISAYQKSLRFFPDSVEIWQSLGNTQWQLGNYRAAIVPLRETLRRDPGRSQAWMFLGDAL 471

Query: 171 VEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPEN 230
           ++ ++     ++  +K+ALQ++P  P A   G+G+   +LG+  +A    +R +  +P+N
Sbjct: 472 MQLDQ--LKKAVIPFKKALQLNPELPQA-DFGLGIILTRLGRHEQAVIHLERTVARNPDN 528

Query: 231 --VEALVALAVMDLQ--ANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFL 286
              +A++  + ++L+  A     +R  M  + R           L  L + ++   Q+ +
Sbjct: 529 FQAQAMLGDSYLELERYAEAVPALRAAMGDVTR-------RQQTLLKLGSAYWHLRQYQM 581

Query: 287 VEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYY 346
             +    ++ +    P     Y  L   Y   G  +KA   Y  +++  +   ++  P +
Sbjct: 582 ALKAYHQSVQLD---PENYRIYNQLGVIYSEIGQPDKAIHAYSEAIRLKS---DYFEPRF 635

Query: 347 GLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKID 406
            LG +   LG +  ALT+ +  L +  +N     + G + +QL +  +A    ++AA+ D
Sbjct: 636 NLGVLYDLLGRYPDALTSLDGALRVDAENPSAHFSRGWVLLQLKRYREAVWAFQQAARYD 695

Query: 407 PRDAQAFIDLGELLISSD-TGAALDAFKTA 435
           P +A A  +LG    ++   G A  AF+ A
Sbjct: 696 PSNADAHFNLGVAFAAAHRRGEARSAFRMA 725



 Score = 48.5 bits (114), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 79/173 (45%), Gaps = 16/173 (9%)

Query: 81  ERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRI--DMHEPSTWVGKGQLL 138
           E   I N LGV Y+ +G+ +            A   Y++A R+  D  EP   +G    L
Sbjct: 595 ENYRIYNQLGVIYSEIGQPDK-----------AIHAYSEAIRLKSDYFEPRFNLGVLYDL 643

Query: 139 LAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGA 198
           L  G    A ++    L  D +N  A   +  V     RY +++  +++A +  PS   A
Sbjct: 644 L--GRYPDALTSLDGALRVDAENPSAHFSRGWVLLQLKRYREAVWAFQQAARYDPSNADA 701

Query: 199 IRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIR 251
               +G+      + G+AR AF+ AL++DP++  AL  LA ++ +  +   ++
Sbjct: 702 -HFNLGVAFAAAHRRGEARSAFRMALRIDPDHTGALTRLAELETRTGKTGPLK 753


>gi|428315210|ref|YP_007113092.1| Tetratricopeptide TPR_2 repeat-containing protein [Oscillatoria
           nigro-viridis PCC 7112]
 gi|428238890|gb|AFZ04676.1| Tetratricopeptide TPR_2 repeat-containing protein [Oscillatoria
           nigro-viridis PCC 7112]
          Length = 1363

 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 60/228 (26%), Positives = 105/228 (46%), Gaps = 19/228 (8%)

Query: 302 PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSA 361
           P  S SY+ L  ++ +  ++++A   Y  ++ E+N   +F + Y  LG V ++L ++  A
Sbjct: 763 PNFSWSYHFLGETWQAMEEHDEAAAAYRKAI-ELNP--DFCWTYNNLGDVLMELSEWEDA 819

Query: 362 LTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLI 421
              + K++E+ PD C + + LG   V L  +E+A    RKA +++P D   +  LGE+L 
Sbjct: 820 AVAYRKLVELNPDFCWSYERLGKALVALENLEEAAAAYRKAIELNPDDCWLYNSLGEVLE 879

Query: 422 SSDTGA-ALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALG---- 476
           S +    A  AF  A  L     E     +   +G     +GE E A   ++  +     
Sbjct: 880 SQENWPEAAVAFGRAIAL-----EPEHSWLYKKLGDALRNQGELERAIAIYEKGINLDPK 934

Query: 477 -----DGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVE 519
                +G+ L+L+  +     I      LQ K   LF  ++N G  +E
Sbjct: 935 SCWCYEGLGLSLMAKQQWEPAIANLVQALQIKP-DLFEAYDNIGYALE 981



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 59/277 (21%), Positives = 125/277 (45%), Gaps = 29/277 (10%)

Query: 168 QACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLD 227
           QA V    G+ ++++   + AL++ P+  GA    +G      G++ +A+Q ++ A+  +
Sbjct: 17  QAEVYLAEGKLNEAVAACESALKIEPNL-GAACQTLGKVMQVRGEIEQAKQWYEAAIDRN 75

Query: 228 PENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFF-------- 279
           P   E    L ++  Q  +     K +   ++A  + P+ A A   LA  +         
Sbjct: 76  PNLPEVYANLGILYSQGKQ---WEKAIAHCEKAISLAPHFAAAYRQLARVWTQLEKREEA 132

Query: 280 --FTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINK 337
             F  Q F +E    TA             +  L  S+   G  ++A   Y  ++K +N 
Sbjct: 133 ADFWYQAFNIEPNWATA-----------EEHVTLGNSFVELGKCDRAMECYSRAIK-LNP 180

Query: 338 PHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQE 397
             +    Y+ LG++ ++   +  A+ N+ + + I P++ E+  +LG  + + G++ +A  
Sbjct: 181 --QLATAYHNLGEMLVREKRWDEAIANYRQAIAINPNSFESYHSLGKTWAERGELNRAIA 238

Query: 398 LLRKAAKIDPRDAQAFIDLGELLISS-DTGAALDAFK 433
              K+ +++P  A+A++ LG +     D  AA+  ++
Sbjct: 239 CYNKSLELNPNYARAYVGLGNVFAQKRDFDAAIKCYR 275



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 67/291 (23%), Positives = 132/291 (45%), Gaps = 24/291 (8%)

Query: 135 GQLLLAKGEVEQASSAFKIVLEADRD-NVPALLGQACVEFNRGR-YSDSLEFYKRALQVH 192
           G+++  +GE+EQA   ++  +  DR+ N+P +     + +++G+ +  ++   ++A+ + 
Sbjct: 52  GKVMQVRGEIEQAKQWYEAAI--DRNPNLPEVYANLGILYSQGKQWEKAIAHCEKAISLA 109

Query: 193 PSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPE--NVEALVALAVMDLQANEAAGI 250
           P    A R  +     +L +  +A   + +A  ++P     E  V L    +   E    
Sbjct: 110 PHFAAAYR-QLARVWTQLEKREEAADFWYQAFNIEPNWATAEEHVTLGNSFV---ELGKC 165

Query: 251 RKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHG----PTKSH 306
            + ME   RA ++ P  A A + L       G+  + E+  + A+A         P    
Sbjct: 166 DRAMECYSRAIKLNPQLATAYHNL-------GEMLVREKRWDEAIANYRQAIAINPNSFE 218

Query: 307 SYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFE 366
           SY++L +++  +G+  +A   Y  S+ E+N    +   Y GLG V  +  DF +A+  + 
Sbjct: 219 SYHSLGKTWAERGELNRAIACYNKSL-ELNP--NYARAYVGLGNVFAQKRDFDAAIKCYR 275

Query: 367 KVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 417
           + LEI  ++      LG    Q  Q ++A    RKA  I+      +++LG
Sbjct: 276 QTLEINDNSYWAYNCLGDALAQKQQWQEAIICYRKAIAINQNIPWFYVNLG 326



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 67/294 (22%), Positives = 130/294 (44%), Gaps = 22/294 (7%)

Query: 134 KGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFN-----RGRYSDSLEFYKRA 188
           + ++ LA+G++ +A +A +  L+ + +     LG AC         RG    + ++Y+ A
Sbjct: 17  QAEVYLAEGKLNEAVAACESALKIEPN-----LGAACQTLGKVMQVRGEIEQAKQWYEAA 71

Query: 189 LQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAA 248
           +  +P+ P  +   +G+   +  Q  KA    ++A+ L P    A   LA +  Q  +  
Sbjct: 72  IDRNPNLP-EVYANLGILYSQGKQWEKAIAHCEKAISLAPHFAAAYRQLARVWTQLEKR- 129

Query: 249 GIRKGMEKMQRAFEIYPYCAMALNY--LANHFFFTGQHFLVEQLTETALAVTNHGPTKSH 306
              +  +   +AF I P  A A  +  L N F   G+    ++  E         P  + 
Sbjct: 130 --EEAADFWYQAFNIEPNWATAEEHVTLGNSFVELGK---CDRAMECYSRAIKLNPQLAT 184

Query: 307 SYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFE 366
           +Y+NL      +  +++A   Y  ++  IN P+ F   Y+ LG+   + G+   A+  + 
Sbjct: 185 AYHNLGEMLVREKRWDEAIANYRQAIA-IN-PNSF-ESYHSLGKTWAERGELNRAIACYN 241

Query: 367 KVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 420
           K LE+ P+       LG+++ Q    + A +  R+  +I+     A+  LG+ L
Sbjct: 242 KSLELNPNYARAYVGLGNVFAQKRDFDAAIKCYRQTLEINDNSYWAYNCLGDAL 295



 Score = 43.5 bits (101), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 75/326 (23%), Positives = 139/326 (42%), Gaps = 59/326 (18%)

Query: 76  ADVRYERIAILNALGVYYTY--LGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVG 133
           A  RY+  AI    G Y TY  LGK   ++++ +E    A   Y  A  ++ +   ++  
Sbjct: 717 ATARYQ-TAIKIKSGNYLTYHKLGKALQEKKQLDE----ARAAYQGAIELNPNFSWSYHF 771

Query: 134 KGQLLLAKGEVEQASSAFKIVLEADRDNVPAL--LGQACVEFNRGRYSDSLEFYKRALQV 191
            G+   A  E ++A++A++  +E + D       LG   +E +   + D+   Y++ +++
Sbjct: 772 LGETWQAMEEHDEAAAAYRKAIELNPDFCWTYNNLGDVLMELSE--WEDAAVAYRKLVEL 829

Query: 192 HPS-CPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA-VMDLQANEAAG 249
           +P  C    RLG  L    L  L +A  A+++A++L+P++     +L  V++ Q N    
Sbjct: 830 NPDFCWSYERLGKALV--ALENLEEAAAAYRKAIELNPDDCWLYNSLGEVLESQEN---- 883

Query: 250 IRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYY 309
                         +P  A+A           G+   +E             P  S  Y 
Sbjct: 884 --------------WPEAAVAF----------GRAIALE-------------PEHSWLYK 906

Query: 310 NLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVL 369
            L  +  ++G+ E+A   Y    K IN   +  + Y GLG   +    +  A+ N  + L
Sbjct: 907 KLGDALRNQGELERAIAIYE---KGINLDPKSCWCYEGLGLSLMAKQQWEPAIANLVQAL 963

Query: 370 EIYPDNCETLKALGHIYVQLGQIEKA 395
           +I PD  E    +G+   Q G+ +++
Sbjct: 964 QIKPDLFEAYDNIGYALEQQGEADES 989


>gi|300868210|ref|ZP_07112842.1| hypothetical protein OSCI_3590059 [Oscillatoria sp. PCC 6506]
 gi|300333834|emb|CBN58026.1| hypothetical protein OSCI_3590059 [Oscillatoria sp. PCC 6506]
          Length = 539

 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 100/402 (24%), Positives = 176/402 (43%), Gaps = 55/402 (13%)

Query: 82  RIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWV--GKGQLLL 139
           R AI    G +  Y+   E  Q + E    LA   Y KA  I ++    W+    G  L 
Sbjct: 172 RQAIALNPGSWELYMKLAEALQGKNELQEALAG--YGKA--IQLNPDFYWLRYKLGTALA 227

Query: 140 AKGEVEQASSAFKIV--LEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPG 197
           A G+ E+A +++K    LE     V   LG       R  + +++  YK+ L++ P    
Sbjct: 228 ATGQWEEAIASYKQAAELEPGAAIVHHYLGHTLAIVQR--WEEAIVSYKKTLELSPESAV 285

Query: 198 AIR-LGIGLCRYKLGQLGKARQAFQRALQLDPENVEAL--VALAVMDLQA-NEAAGIRKG 253
             + LG  L R  L +  +A  +++++++L+P ++E    +  A+  LQ  +EA G  + 
Sbjct: 286 VYQHLGDALAR--LQRWSEAVASYRKSVKLEPNSLEGQDHLGFALTQLQQWDEAIGCYR- 342

Query: 254 MEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLAR 313
                +A E+ P   +   +L +     G     EQ  + A                 A 
Sbjct: 343 -----KALELSPNSDVVYCHLGDALRQRG----TEQDLDEA-----------------AS 376

Query: 314 SYHSKGDYEKAGLYYMASVKEINKP--HEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEI 371
            YH   +     L     V E+ KP  HE  F    LGQ     G ++ A+  +   ++I
Sbjct: 377 CYHKAIELTPNNLEICQKVLEM-KPIDHEAQFQ---LGQALAAQGQWQQAIEAYVLYIDI 432

Query: 372 YPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSD-TGAALD 430
            PDN E    LG      GQ ++A E  R+A  +DP  +Q++ ++GE L++ D    A++
Sbjct: 433 KPDNYEVHHLLGEALAARGQWQQAIEAYRRAVDLDPNSSQSYHNMGEALMAIDEMDKAIE 492

Query: 431 AFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFK 472
           A++ +  L      + P+ + NN+G    ++G+ + A  +++
Sbjct: 493 AYRQSAEL----DPDNPL-IYNNLGDALAKQGKVDEASAAYR 529



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 117/524 (22%), Positives = 220/524 (41%), Gaps = 68/524 (12%)

Query: 129 STWVGKGQLLLAKGEVEQASSAFKIVLEADRD------NVPALLGQACVEFNRGRYSDSL 182
           ST+  +G L    G+ E+A++A++  LE + D      N+  +L Q      +G+  ++ 
Sbjct: 13  STYFNQGNLFKQSGKWEEAAAAYRRCLELNPDFSWYHHNLGEVLAQ------QGKLEEAG 66

Query: 183 EFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE---ALVALAV 239
           + Y+RA +++P+   +   G+G    + G    A  A++RA+++ P+  E   +L     
Sbjct: 67  DCYQRACELNPNSAWSWH-GLGEMLERQGNWDGAVAAYRRAVEIYPDFYEFHNSLGKALC 125

Query: 240 MDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTN 299
              Q  EA G       +++A E+    A+    L       GQ   V++  E       
Sbjct: 126 FQGQLEEALGC------LRQAIELDAESALPYENLWEVLARLGQ---VDEGIECLRQAIA 176

Query: 300 HGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFR 359
             P     Y  LA +   K + ++A   Y    K I    +F +  Y LG      G + 
Sbjct: 177 LNPGSWELYMKLAEALQGKNELQEALAGYG---KAIQLNPDFYWLRYKLGTALAATGQWE 233

Query: 360 SALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGEL 419
            A+ ++++  E+ P        LGH    + + E+A    +K  ++ P  A  +  LG+ 
Sbjct: 234 EAIASYKQAAELEPGAAIVHHYLGHTLAIVQRWEEAIVSYKKTLELSPESAVVYQHLGDA 293

Query: 420 LISSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDAL-- 475
           L      A L  +  A    +K+ +  P  +E  +++G    +  +++ A   ++ AL  
Sbjct: 294 L------ARLQRWSEAVASYRKSVKLEPNSLEGQDHLGFALTQLQQWDEAIGCYRKALEL 347

Query: 476 ---GDGIWLTLLDS---KTKTYVIDASASMLQFKDMQLFHR-FENDGNHVELPWNKVTVL 528
               D ++  L D+   +     +D +AS         +H+  E   N++E+   KV  +
Sbjct: 348 SPNSDVVYCHLGDALRQRGTEQDLDEAASC--------YHKAIELTPNNLEIC-QKVLEM 398

Query: 529 --------FNLARLLE---QIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQL 577
                   F L + L    Q    + A VLY  I  K  +Y   +L   A+A AR   Q 
Sbjct: 399 KPIDHEAQFQLGQALAAQGQWQQAIEAYVLY--IDIKPDNYEVHHLLGEALA-ARGQWQQ 455

Query: 578 SIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASD 621
           +IE    A+ ++     +   +G+  +  D+  KA E +R +++
Sbjct: 456 AIEAYRRAVDLDPNSSQSYHNMGEALMAIDEMDKAIEAYRQSAE 499



 Score = 44.3 bits (103), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 33/143 (23%), Positives = 65/143 (45%), Gaps = 8/143 (5%)

Query: 335 INKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEK 394
           + K  + +  Y+  G +  + G +  A   + + LE+ PD       LG +  Q G++E+
Sbjct: 5   LKKNQDNVSTYFNQGNLFKQSGKWEEAAAAYRRCLELNPDFSWYHHNLGEVLAQQGKLEE 64

Query: 395 AQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLN 452
           A +  ++A +++P  A ++  LGE+L           +  A    ++A E  P   E  N
Sbjct: 65  AGDCYQRACELNPNSAWSWHGLGEMLERQGN------WDGAVAAYRRAVEIYPDFYEFHN 118

Query: 453 NIGVIHFEKGEFESAHQSFKDAL 475
           ++G     +G+ E A    + A+
Sbjct: 119 SLGKALCFQGQLEEALGCLRQAI 141


>gi|218780050|ref|YP_002431368.1| hypothetical protein Dalk_2207 [Desulfatibacillum alkenivorans
           AK-01]
 gi|218761434|gb|ACL03900.1| Tetratricopeptide TPR_2 repeat protein [Desulfatibacillum
           alkenivorans AK-01]
          Length = 661

 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 79/308 (25%), Positives = 133/308 (43%), Gaps = 16/308 (5%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
           A Q + +A  +    P+ +V + +   A G+ E+A + F   +    D        A   
Sbjct: 100 AVQDFTQAINMIARFPAAYVQRAKSYAALGDYEKARADFDAAIALLPDQAWPYREIAGFC 159

Query: 173 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 232
             +G Y  +L +Y +AL++ P    A+   +G  +   G   K  Q    A + DP++ E
Sbjct: 160 SQQGNYGQALVYYLKALEIEPDN-AALMCLMGKAQADAGYPEKGIQTCLNAAKSDPQSAE 218

Query: 233 ALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTE 292
             +    M L  ++       +E+  +A  + P    AL   A  +   G++   ++   
Sbjct: 219 PYL---TMGLIYSKEGDHYAAVEQYTKAMVLDPGSNQALGRRALAYAAAGEY---DKALA 272

Query: 293 TALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQV- 351
            A  V    P K+  YY L   Y  + + EKA   Y  ++ EI  P+E   P   LGQ  
Sbjct: 273 DAQKVVADDPDKALGYYYLGSIYTQRNEPEKAYESYTKAL-EIT-PNE---PALYLGQAH 327

Query: 352 --QLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRD 409
             +LK GD+  AL N ++ + ++P         G+IY  +GQ  KA E   KA +++P+ 
Sbjct: 328 AARLK-GDYDLALKNADEAIALFPGKDSLYFERGNIYEIMGQKPKALEDYLKAVELNPQS 386

Query: 410 AQAFIDLG 417
            Q    LG
Sbjct: 387 VQGHFRLG 394



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 55/196 (28%), Positives = 90/196 (45%), Gaps = 11/196 (5%)

Query: 246 EAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKS 305
           + A + + +E +  A ++ P  A+ L      +  TG H   EQ  +      N      
Sbjct: 59  DPATMDQAIEDLSAAAKLSPDNAVLLFQRGGAYARTGDH---EQAVQDFTQAINMIARFP 115

Query: 306 HSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNF 365
            +Y   A+SY + GDYEKA   + A++  +  P +  +PY  +     + G++  AL  +
Sbjct: 116 AAYVQRAKSYAALGDYEKARADFDAAIALL--PDQ-AWPYREIAGFCSQQGNYGQALVYY 172

Query: 366 EKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDT 425
            K LEI PDN   +  +G      G  EK  +    AAK DP+ A+ ++ +G  LI S  
Sbjct: 173 LKALEIEPDNAALMCLMGKAQADAGYPEKGIQTCLNAAKSDPQSAEPYLTMG--LIYSKE 230

Query: 426 G---AALDAFKTARTL 438
           G   AA++ +  A  L
Sbjct: 231 GDHYAAVEQYTKAMVL 246


>gi|220922402|ref|YP_002497704.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium
           nodulans ORS 2060]
 gi|219947009|gb|ACL57401.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium
           nodulans ORS 2060]
          Length = 818

 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 70/295 (23%), Positives = 127/295 (43%), Gaps = 18/295 (6%)

Query: 117 YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 176
           Y++A R+D    + ++ +G    +KGE  +A + F   L  D  +V A  G+     ++G
Sbjct: 253 YDQALRLDPKYANIYINRGYAFRSKGEYNRAIADFDQALRLDPKSVIAYTGRGDAFRSKG 312

Query: 177 RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEAL-- 234
               ++  Y +AL+ +P    A R      R K G+  +A   + +AL+LDP++  A   
Sbjct: 313 ENDRAIADYDQALRFNPKYAYAYRNRGDAFRNK-GEYDRAIADYTQALRLDPQSATAYNN 371

Query: 235 VALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETA 294
             LA  D    +     + +    +A  + P  A A       F+  G+H       E A
Sbjct: 372 RGLAFQDKGEYD-----RAIADYDQALRLDPKDAAAYTNRGAAFYRKGEHDRAIADYEEA 426

Query: 295 LAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEIN--KPHEFIFPYYGLGQVQ 352
           L +    P  + +Y     + + KGDY++A    +A + +    KP  F  P+Y  G   
Sbjct: 427 LRLD---PKSAAAYNGRGAALNKKGDYDRA----IADLDQALRLKPG-FTNPHYHRGMAF 478

Query: 353 LKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 407
              GD   AL +  + + + P   +  +  G  +   G+ ++A   L +A ++ P
Sbjct: 479 RHKGDLDRALADLNEAVRLNPKYADAYQERGVTFQARGESDRALADLAEAVRLKP 533



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 62/305 (20%), Positives = 128/305 (41%), Gaps = 18/305 (5%)

Query: 117 YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 176
           Y++A R+D    + ++ +G     KGE ++A + +   L  D  +      +     ++G
Sbjct: 117 YDQALRLDPKYANIYINRGLAFYRKGEYDRAIADYDQALRLDLRDAVVYTNRGDAFRSKG 176

Query: 177 RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVA 236
            Y  ++  Y +AL+ +P  P A R   G      G+  +A   + +AL+L+PE+  A   
Sbjct: 177 EYDRAIADYDQALRFNPKYPYAYR-NRGDTFQSKGEYDRAIADYDQALRLNPEDAAAYTH 235

Query: 237 LAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALA 296
             +     +E     + +    +A  + P         AN +   G  F  +     A+A
Sbjct: 236 RGLAFQSKSE---YDRAIADYDQALRLDP-------KYANIYINRGYAFRSKGEYNRAIA 285

Query: 297 VTNHG----PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQ 352
             +      P    +Y     ++ SKG+ ++A   Y  +++   K   + + Y   G   
Sbjct: 286 DFDQALRLDPKSVIAYTGRGDAFRSKGENDRAIADYDQALRFNPK---YAYAYRNRGDAF 342

Query: 353 LKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQA 412
              G++  A+ ++ + L + P +       G  +   G+ ++A     +A ++DP+DA A
Sbjct: 343 RNKGEYDRAIADYTQALRLDPQSATAYNNRGLAFQDKGEYDRAIADYDQALRLDPKDAAA 402

Query: 413 FIDLG 417
           + + G
Sbjct: 403 YTNRG 407



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 64/302 (21%), Positives = 131/302 (43%), Gaps = 22/302 (7%)

Query: 127 EPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYK 186
           + + +  +G    +KGE ++A + +   L  D  +  A   +    + +G Y  ++  Y 
Sbjct: 25  DATDYYNRGDAFRSKGEYDRAIADYDQALRLDPKSAVAYTHRGLAFYRKGEYDRAIADYD 84

Query: 187 RALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANE 246
           +AL++ P    A     GL  Y+ G+  +A   + +AL+LDP+     +   +       
Sbjct: 85  QALRLDPKSAVAY-THRGLAFYRKGEYDRAIADYDQALRLDPKYANIYINRGL------- 136

Query: 247 AAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH------ 300
            A  RKG  +  RA   Y   A+ L+ L +   +T +        E   A+ ++      
Sbjct: 137 -AFYRKG--EYDRAIADYD-QALRLD-LRDAVVYTNRGDAFRSKGEYDRAIADYDQALRF 191

Query: 301 GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRS 360
            P   ++Y N   ++ SKG+Y++A   Y  +++ +N      + + GL   Q K  ++  
Sbjct: 192 NPKYPYAYRNRGDTFQSKGEYDRAIADYDQALR-LNPEDAAAYTHRGLA-FQSK-SEYDR 248

Query: 361 ALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 420
           A+ ++++ L + P         G+ +   G+  +A     +A ++DP+   A+   G+  
Sbjct: 249 AIADYDQALRLDPKYANIYINRGYAFRSKGEYNRAIADFDQALRLDPKSVIAYTGRGDAF 308

Query: 421 IS 422
            S
Sbjct: 309 RS 310



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 73/360 (20%), Positives = 154/360 (42%), Gaps = 16/360 (4%)

Query: 117 YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 176
           Y++A R+D      +  +G     KGE ++A + +   L  D  +  A   +    + +G
Sbjct: 49  YDQALRLDPKSAVAYTHRGLAFYRKGEYDRAIADYDQALRLDPKSAVAYTHRGLAFYRKG 108

Query: 177 RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVA 236
            Y  ++  Y +AL++ P     I +  GL  Y+ G+  +A   + +AL+LD    +A+V 
Sbjct: 109 EYDRAIADYDQALRLDPKYAN-IYINRGLAFYRKGEYDRAIADYDQALRLDLR--DAVVY 165

Query: 237 LAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALA 296
               D   ++     + +    +A    P    A     + F   G++       + AL 
Sbjct: 166 TNRGDAFRSKGE-YDRAIADYDQALRFNPKYPYAYRNRGDTFQSKGEYDRAIADYDQALR 224

Query: 297 VTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLG 356
           +    P  + +Y +   ++ SK +Y++A   Y  +++ ++  +  I  Y   G      G
Sbjct: 225 LN---PEDAAAYTHRGLAFQSKSEYDRAIADYDQALR-LDPKYANI--YINRGYAFRSKG 278

Query: 357 DFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDL 416
           ++  A+ +F++ L + P +       G  +   G+ ++A     +A + +P+ A A+ + 
Sbjct: 279 EYNRAIADFDQALRLDPKSVIAYTGRGDAFRSKGENDRAIADYDQALRFNPKYAYAYRNR 338

Query: 417 GELLIS-SDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
           G+   +  +   A+  +  A  L  ++         NN G+   +KGE++ A   +  AL
Sbjct: 339 GDAFRNKGEYDRAIADYTQALRLDPQSA-----TAYNNRGLAFQDKGEYDRAIADYDQAL 393



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 69/332 (20%), Positives = 135/332 (40%), Gaps = 38/332 (11%)

Query: 117 YNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRG 176
           Y++A R +   P  +  +G    +KGE ++A + +   L  + ++  A   +     ++ 
Sbjct: 185 YDQALRFNPKYPYAYRNRGDTFQSKGEYDRAIADYDQALRLNPEDAAAYTHRGLAFQSKS 244

Query: 177 RYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVA 236
            Y  ++  Y +AL++ P     I +  G      G+  +A   F +AL+LDP++V A   
Sbjct: 245 EYDRAIADYDQALRLDPKYAN-IYINRGYAFRSKGEYNRAIADFDQALRLDPKSVIAYTG 303

Query: 237 L------------AVMDL-QA------------NEAAGIR------KGMEKMQRAFEIYP 265
                        A+ D  QA            N     R      + +    +A  + P
Sbjct: 304 RGDAFRSKGENDRAIADYDQALRFNPKYAYAYRNRGDAFRNKGEYDRAIADYTQALRLDP 363

Query: 266 YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAG 325
             A A N     F   G++       + AL +    P  + +Y N   +++ KG++++A 
Sbjct: 364 QSATAYNNRGLAFQDKGEYDRAIADYDQALRLD---PKDAAAYTNRGAAFYRKGEHDRAI 420

Query: 326 LYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 385
             Y  +++   K       Y G G    K GD+  A+ + ++ L + P         G  
Sbjct: 421 ADYEEALRLDPKSAA---AYNGRGAALNKKGDYDRAIADLDQALRLKPGFTNPHYHRGMA 477

Query: 386 YVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 417
           +   G +++A   L +A +++P+ A A+ + G
Sbjct: 478 FRHKGDLDRALADLNEAVRLNPKYADAYQERG 509


>gi|348516824|ref|XP_003445937.1| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit isoform
           2 [Oreochromis niloticus]
          Length = 1038

 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 87/391 (22%), Positives = 165/391 (42%), Gaps = 34/391 (8%)

Query: 93  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 152
           Y+ LG +  ++ + +E    A ++Y  A R+       ++     L+A G++E A  A+ 
Sbjct: 82  YSNLGNVYKERGQLQE----AIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 137

Query: 153 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 210
             L+ + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 138 SALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIETQPNFAVAWS-NLGCVFNAQ 194

Query: 211 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 270
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 195 GEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAGYLRALSLSPNHAVV 251

Query: 271 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 330
              LA  ++  G   L       A+ +  H P    +Y NLA +   KG+  +A   Y  
Sbjct: 252 HGNLACVYYEQGLIDLAIDTYRRAIELQPHFPD---AYCNLANALKEKGNVSEAEECYNT 308

Query: 331 SVKEINKPHEFIFPYYG-----LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 385
           +++        + P +      L  ++ + G    A+  + K LE++P+       L  +
Sbjct: 309 ALR--------LCPTHADSLNNLANIKREQGYIEEAVQLYRKALEVFPEFAAAHSNLASV 360

Query: 386 YVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGE 444
             Q G++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +      
Sbjct: 361 LQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA- 419

Query: 445 EVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
               +  +N+  IH + G    A  S++ AL
Sbjct: 420 ----DAHSNLASIHKDSGNIPEAIASYRTAL 446



 Score = 63.5 bits (153), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 103/496 (20%), Positives = 194/496 (39%), Gaps = 64/496 (12%)

Query: 142 GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 201
           G+ E A      +   + DN   LL  + + F   R   S  F   A++ +P    A   
Sbjct: 25  GDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPMLAEAYS- 83

Query: 202 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 261
            +G    + GQL +A + ++ AL+L P+ ++  + LA   + A +  G    ++    A 
Sbjct: 84  NLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEG---AVQAYVSAL 140

Query: 262 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 319
           +  P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G
Sbjct: 141 QYNPDLYCVRS--DLGNLLKALGR---LEEAKACYLKAIETQPNFAVAWSNLGCVFNAQG 195

Query: 320 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 379
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++    
Sbjct: 196 EIWLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVAGYLRALSLSPNHAVVH 252

Query: 380 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLI-SSDTGAALDAFKTARTL 438
             L  +Y + G I+ A +  R+A ++ P    A+ +L   L    +   A + + TA  L
Sbjct: 253 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGNVSEAEECYNTALRL 312

Query: 439 LKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASAS 498
                +      LNN+  I  E+G  E A Q ++ AL                       
Sbjct: 313 CPTHADS-----LNNLANIKREQGYIEEAVQLYRKAL----------------------- 344

Query: 499 MLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDY 558
                  ++F  F                  NLA +L+Q      A + Y+  +     +
Sbjct: 345 -------EVFPEF-------------AAAHSNLASVLQQQGKLQEALMHYKEAIRISPTF 384

Query: 559 VDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRA 618
            DAY  +    K   ++Q +++    A+++N  + +A S L  +   + +  +A  ++R 
Sbjct: 385 ADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRT 444

Query: 619 ASD-ATDGKDSYATLS 633
           A     D  D+Y  L+
Sbjct: 445 ALKLKPDFPDAYCNLA 460


>gi|166362921|ref|YP_001655194.1| hypothetical protein MAE_01800, partial [Microcystis aeruginosa
           NIES-843]
 gi|166085294|dbj|BAG00002.1| tetratricopeptide repeat protein [Microcystis aeruginosa NIES-843]
          Length = 594

 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 95/378 (25%), Positives = 160/378 (42%), Gaps = 38/378 (10%)

Query: 110 FILATQYYNKASRI--DMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLG 167
           F  A   Y++A  I  D+H+   W  +G  L   G +E+A +++   LE   D   A   
Sbjct: 200 FAEAIASYDRALEIKPDLHQ--AWYNRGIALGNLGRLEEAIASYDQALEIKPDQHEAWYN 257

Query: 168 QACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLD 227
           +     N GR+++++  Y +AL++ P    A     G+    LG+  +A  ++ RAL++ 
Sbjct: 258 RGIALGNLGRFAEAIASYDKALEIKPDDHEAW-YNRGIALGNLGRFAEAIASYDRALEIK 316

Query: 228 PENVEALV--ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 285
           P+  +A     +A+ +L   E A     +    +A EI P           H  +  +  
Sbjct: 317 PDLHQAWYNRGIALGNLGRLEEA-----IASYDQALEIKP---------DQHEAWYNRGI 362

Query: 286 LVEQLTETALAVTNHG------PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPH 339
            +  L   A A+ ++       P    ++Y    +    G + +A   Y  ++ EI KP 
Sbjct: 363 ALGNLGRFAEAIASYDKALEIKPDDHQAWYGRGFALDDLGRFAEAIASYDKAL-EI-KP- 419

Query: 340 EFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELL 399
           ++   +Y  G     LG F  A+ ++++ LE  PD  E     G     LG++E+A    
Sbjct: 420 DYHQAWYNRGFALGNLGRFEQAIASYDRALEFKPDLHEAWVNRGVALGNLGRLEEALASY 479

Query: 400 RKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVPI--EVLNNIGVI 457
            KA +  P   +A+ + G   I+ D    L  F+ A     KA E  P   E  NN G+ 
Sbjct: 480 DKALEFKPDLHEAWNNRG---IALDN---LRRFEQALASYDKALEIKPDLHEAWNNRGIA 533

Query: 458 HFEKGEFESAHQSFKDAL 475
                 FE A  S+  AL
Sbjct: 534 LANLRRFEQALASYDRAL 551



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 77/347 (22%), Positives = 138/347 (39%), Gaps = 54/347 (15%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
           A   Y++A  I   +   W  +G  L   G   +A +++   LE   D+  A   +    
Sbjct: 237 AIASYDQALEIKPDQHEAWYNRGIALGNLGRFAEAIASYDKALEIKPDDHEAWYNRGIAL 296

Query: 173 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 232
            N GR+++++  Y RAL++ P    A     G+    LG+L +A  ++ +AL++ P+  E
Sbjct: 297 GNLGRFAEAIASYDRALEIKPDLHQAW-YNRGIALGNLGRLEEAIASYDQALEIKPDQHE 355

Query: 233 ALV--ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQL 290
           A     +A+ +L         + +    +A EI P          +H  + G+ F ++ L
Sbjct: 356 AWYNRGIALGNL-----GRFAEAIASYDKALEIKP---------DDHQAWYGRGFALDDL 401

Query: 291 TETALAVTNHG------PTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIF- 343
              A A+ ++       P    ++YN   +  + G +E+A   Y  +++     HE    
Sbjct: 402 GRFAEAIASYDKALEIKPDYHQAWYNRGFALGNLGRFEQAIASYDRALEFKPDLHEAWVN 461

Query: 344 ---PYYGLGQVQLKLGD---------------------------FRSALTNFEKVLEIYP 373
                  LG+++  L                             F  AL +++K LEI P
Sbjct: 462 RGVALGNLGRLEEALASYDKALEFKPDLHEAWNNRGIALDNLRRFEQALASYDKALEIKP 521

Query: 374 DNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 420
           D  E     G     L + E+A     +A +I P   QA+ + G  L
Sbjct: 522 DLHEAWNNRGIALANLRRFEQALASYDRALEIKPDFHQAWTNRGNAL 568



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 72/307 (23%), Positives = 125/307 (40%), Gaps = 18/307 (5%)

Query: 110 FILATQYYNKASRI--DMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLG 167
           F  A   Y++A  I  D+H+   W  +G  L   G +E+A +++   LE   D   A   
Sbjct: 302 FAEAIASYDRALEIKPDLHQ--AWYNRGIALGNLGRLEEAIASYDQALEIKPDQHEAWYN 359

Query: 168 QACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLD 227
           +     N GR+++++  Y +AL++ P    A   G G     LG+  +A  ++ +AL++ 
Sbjct: 360 RGIALGNLGRFAEAIASYDKALEIKPDDHQAW-YGRGFALDDLGRFAEAIASYDKALEIK 418

Query: 228 PENVEALV--ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 285
           P+  +A      A+ +L   E A     +    RA E  P    A     N     G   
Sbjct: 419 PDYHQAWYNRGFALGNLGRFEQA-----IASYDRALEFKPDLHEAW---VNRGVALGNLG 470

Query: 286 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 345
            +E+   +        P    ++ N   +  +   +E+A   Y  +++     HE    +
Sbjct: 471 RLEEALASYDKALEFKPDLHEAWNNRGIALDNLRRFEQALASYDKALEIKPDLHE---AW 527

Query: 346 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKI 405
              G     L  F  AL ++++ LEI PD  +     G+    LG+  +A     +A  I
Sbjct: 528 NNRGIALANLRRFEQALASYDRALEIKPDFHQAWTNRGNALRNLGRWAEAIASYYQAVAI 587

Query: 406 DPRDAQA 412
              D QA
Sbjct: 588 KSDDHQA 594


>gi|428319715|ref|YP_007117597.1| glycosyl transferase family 2 [Oscillatoria nigro-viridis PCC 7112]
 gi|428243395|gb|AFZ09181.1| glycosyl transferase family 2 [Oscillatoria nigro-viridis PCC 7112]
          Length = 1533

 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 155/679 (22%), Positives = 272/679 (40%), Gaps = 100/679 (14%)

Query: 121 SRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVP--ALLGQA--------- 169
           S I++ +P  +    +   A+G++EQA +A K  L+  +   P   +LG A         
Sbjct: 268 STINIEDPEAYKILAEGYFAQGKLEQAIAACKKALQI-KPEAPLYKMLGNALQAGGKIDE 326

Query: 170 -------CVEFNRG----------------RYSDSLEFYKRALQVHPSCPGAIRLGIGLC 206
                   +E N                  ++  ++  Y++A+ + P   GA R    L 
Sbjct: 327 AKSCYVKAIEINPNFAEAYANYGSICAQQEQWQQAVSAYEKAIALKPDFAGAFRNFAKLL 386

Query: 207 RYKLGQLGKARQAFQRALQLDPENVEAL----VALAVMDLQANEAAGIRKGMEKMQRAFE 262
             +LG+  +A +A+ RA  +DP++  A     +A  ++     E   + KG+E  +RA E
Sbjct: 387 T-QLGKSEEAAEAWYRAFAIDPKSCTAEEHENLAKTLI-----EQGKVDKGIECYRRAVE 440

Query: 263 IYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTN---HGPTKSHSYYNLARSYHSKG 319
           + P    A + L       GQ    EQ      A TN   + P  S S+ NLA S     
Sbjct: 441 LNPNAGAAYHELGE--ILKGQ----EQWEAAVDAYTNAIRNNPNLSWSHNNLAESLVKLE 494

Query: 320 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 379
            +E+A   Y  ++ E+N   +F + +  L  V LKL  +  A+ ++ K  E+ PD   + 
Sbjct: 495 RWEEAVNAYRKAI-ELNP--DFSWSHNNLADVLLKLERWEEAVESYRKATELNPDFSWSH 551

Query: 380 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLL 439
             L    ++LG+ ++A    +++ +++P    A  +L E L++      L+ +  A    
Sbjct: 552 NYLADALIKLGRWDEAISAYQRSIELNPDHFWAHNNLAEALVN------LERWDEAVVAY 605

Query: 440 KKAGEEVP--IEVLNNIGVIHFEKGEFESAHQSFKDALG---DGIWLTLLDSKTKTYVID 494
           ++A E  P      + +G    E   +E A   ++ A     D  W         TY   
Sbjct: 606 RRANEVNPNFFWSQSKLGDALLEMERWEEAIDVYRRAAELNRDFPW---------TYYNM 656

Query: 495 ASA-SMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILF 553
           A+A   L+  D  +           +LPW     L +  R+  Q  D   A  LYR  + 
Sbjct: 657 ATAFEKLERWDESIAAYRRAAEIQADLPW-LSQKLADALRMRSQW-DLKEAMRLYRRAIQ 714

Query: 554 KYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGD--LELKNDD--- 608
           + +D V  Y +  A+  A N+  L +EL N  ++ N  +P+   +     L+++ DD   
Sbjct: 715 ENRDDVQLYHK--ALEIAPNDADLYVELANALVRKN--WPDGAIVFYQMALQIRPDDKAI 770

Query: 609 ------WVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKE 662
                  +K K   R A  +       +  ++ +    AA  +E  A   E     +A  
Sbjct: 771 SGLLEEVLKKKGVSRGAEKSDRAVHGNSGNAIEHTPGIAAEYHELGASLQEEGKFAEAVA 830

Query: 663 LYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAH 722
            Y + I  + +     +  G VL   G+ D S   + +  E     V+        NLA 
Sbjct: 831 AYRKAISINPNYFGTHHNLGDVLKWIGKVDESIKSYHKAAELNPNFVWSHH-----NLAD 885

Query: 723 VYFAQGNFALAMKMYQNCL 741
           VY  +G    A+  Y+  +
Sbjct: 886 VYQQEGRLDEAVAAYRKAI 904



 Score = 43.5 bits (101), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 34/129 (26%), Positives = 60/129 (46%), Gaps = 8/129 (6%)

Query: 349 GQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPR 408
           G++ L  G    A+ + E+ L+I+P+     K LG+      ++E+A+    KA +I+P 
Sbjct: 18  GEIYLSQGKIEEAIASCEQALKIHPNFAPAYKTLGNALQAQARMEEARHWYAKAIEIEPN 77

Query: 409 DAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFES 466
            A+ + +LG L      GA    ++ A    +KA    P    V  N+  +  + G+ E 
Sbjct: 78  FAEVYANLGSL------GAQQQKWQEAIGFYQKAIAIKPNFAGVYRNLAKVFGQIGKPEE 131

Query: 467 AHQSFKDAL 475
           A Q +  A 
Sbjct: 132 AQQCWYQAF 140



 Score = 40.8 bits (94), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 52/237 (21%), Positives = 104/237 (43%), Gaps = 19/237 (8%)

Query: 180 DSLEFYKRALQVHPSCPGA-IRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALA 238
           D ++ Y +AL++ P+     + L   L R        A   +Q ALQ+ P++     A++
Sbjct: 718 DDVQLYHKALEIAPNDADLYVELANALVRKNWPD--GAIVFYQMALQIRPDDK----AIS 771

Query: 239 VMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNY---LANHFFFTGQHFLVEQLTETAL 295
            +  +  +  G+ +G EK  RA  ++     A+ +   +A  +   G     E     A+
Sbjct: 772 GLLEEVLKKKGVSRGAEKSDRA--VHGNSGNAIEHTPGIAAEYHELGASLQEEGKFAEAV 829

Query: 296 AVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHE----FIFPYYGLGQV 351
           A      + + +Y+    ++H+ GD  K       S+K  +K  E    F++ ++ L  V
Sbjct: 830 AAYRKAISINPNYFG---THHNLGDVLKWIGKVDESIKSYHKAAELNPNFVWSHHNLADV 886

Query: 352 QLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPR 408
             + G    A+  + K +E+ PD   +   L     +  ++ +A E  + A+K+DP+
Sbjct: 887 YQQEGRLDEAVAAYRKAIEVAPDFGWSYYNLAKTLAKQDKLSEALEAYQTASKLDPK 943


>gi|348516822|ref|XP_003445936.1| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit isoform
           1 [Oreochromis niloticus]
          Length = 1048

 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 87/391 (22%), Positives = 165/391 (42%), Gaps = 34/391 (8%)

Query: 93  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 152
           Y+ LG +  ++ + +E    A ++Y  A R+       ++     L+A G++E A  A+ 
Sbjct: 92  YSNLGNVYKERGQLQE----AIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 147

Query: 153 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 210
             L+ + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 148 SALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIETQPNFAVAWS-NLGCVFNAQ 204

Query: 211 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 270
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 205 GEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAGYLRALSLSPNHAVV 261

Query: 271 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 330
              LA  ++  G   L       A+ +  H P    +Y NLA +   KG+  +A   Y  
Sbjct: 262 HGNLACVYYEQGLIDLAIDTYRRAIELQPHFPD---AYCNLANALKEKGNVSEAEECYNT 318

Query: 331 SVKEINKPHEFIFPYYG-----LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 385
           +++        + P +      L  ++ + G    A+  + K LE++P+       L  +
Sbjct: 319 ALR--------LCPTHADSLNNLANIKREQGYIEEAVQLYRKALEVFPEFAAAHSNLASV 370

Query: 386 YVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGE 444
             Q G++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +      
Sbjct: 371 LQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA- 429

Query: 445 EVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
               +  +N+  IH + G    A  S++ AL
Sbjct: 430 ----DAHSNLASIHKDSGNIPEAIASYRTAL 456



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 103/496 (20%), Positives = 194/496 (39%), Gaps = 64/496 (12%)

Query: 142 GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 201
           G+ E A      +   + DN   LL  + + F   R   S  F   A++ +P    A   
Sbjct: 35  GDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPMLAEAYS- 93

Query: 202 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 261
            +G    + GQL +A + ++ AL+L P+ ++  + LA   + A +  G    ++    A 
Sbjct: 94  NLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEG---AVQAYVSAL 150

Query: 262 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 319
           +  P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G
Sbjct: 151 QYNPDLYCVRS--DLGNLLKALGR---LEEAKACYLKAIETQPNFAVAWSNLGCVFNAQG 205

Query: 320 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 379
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++    
Sbjct: 206 EIWLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVAGYLRALSLSPNHAVVH 262

Query: 380 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLI-SSDTGAALDAFKTARTL 438
             L  +Y + G I+ A +  R+A ++ P    A+ +L   L    +   A + + TA  L
Sbjct: 263 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGNVSEAEECYNTALRL 322

Query: 439 LKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASAS 498
                +      LNN+  I  E+G  E A Q ++ AL                       
Sbjct: 323 CPTHADS-----LNNLANIKREQGYIEEAVQLYRKAL----------------------- 354

Query: 499 MLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDY 558
                  ++F  F                  NLA +L+Q      A + Y+  +     +
Sbjct: 355 -------EVFPEF-------------AAAHSNLASVLQQQGKLQEALMHYKEAIRISPTF 394

Query: 559 VDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRA 618
            DAY  +    K   ++Q +++    A+++N  + +A S L  +   + +  +A  ++R 
Sbjct: 395 ADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRT 454

Query: 619 ASD-ATDGKDSYATLS 633
           A     D  D+Y  L+
Sbjct: 455 ALKLKPDFPDAYCNLA 470


>gi|297624994|ref|YP_003706428.1| hypothetical protein [Truepera radiovictrix DSM 17093]
 gi|297166174|gb|ADI15885.1| Tetratricopeptide TPR_2 repeat protein [Truepera radiovictrix DSM
           17093]
          Length = 357

 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 80/312 (25%), Positives = 130/312 (41%), Gaps = 33/312 (10%)

Query: 116 YYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPAL--LGQACVEF 173
           +Y +    + + P   +GKGQ L+ +G  ++  +  + VLEA  +   A   L  A VE 
Sbjct: 47  FYQQVLEREANNPDALLGKGQALVCEGAFDEGIATLQRVLEAAPERTEAYLRLASAYVEQ 106

Query: 174 NRGRYSDSLEFYKRALQV-----HPSCPGAIRLGI-GLCRYKLGQLGKARQAFQRALQLD 227
           +R       E  + AL V          GA  L + G+  Y+ G+L  AR A QRA+ LD
Sbjct: 107 HRNAPQRHTEGLQEALAVLEEAESAGLGGAELLNLRGMILYRRGELEAARDALQRAVALD 166

Query: 228 PENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQH--- 284
                    L +  L   E   +   +  ++RA  + P  A A N L + +   G+    
Sbjct: 167 STAAAYYENLGLTYLGLGE---LEPAVRTLRRAVTLNPDSASARNQLGSAYLLLGRCEDA 223

Query: 285 -FLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIF 343
            F +EQ    A       P +  + +NL R+    G+   A  Y+   V         ++
Sbjct: 224 LFELEQAVSLA-------PEQLETNFNLGRALFDCGEVRAARPYFEKVVALDVTALPPVY 276

Query: 344 PYYGLGQVQLKLGDFRSALTNFEK-VLEIYPDNCETLKALGHIYVQLGQI--------EK 394
            Y  L ++ L+ G++ +A+T   K  L   P+  E    LG  Y   G+         EK
Sbjct: 277 TY--LARIDLEEGNYDAAVTQATKGALLPQPNAAEAYYWLGQAYEARGRTSEDGASDAEK 334

Query: 395 AQELLRKAAKID 406
           A+E   +A ++D
Sbjct: 335 AREAYERALQLD 346



 Score = 41.2 bits (95), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 71/280 (25%), Positives = 111/280 (39%), Gaps = 26/280 (9%)

Query: 208 YKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAG-IRKGMEKMQRAFEIYP- 265
           Y  G    AR  +Q+ L+ +  N +AL+       QA    G   +G+  +QR  E  P 
Sbjct: 36  YAQGNCLSARLFYQQVLEREANNPDALLGKG----QALVCEGAFDEGIATLQRVLEAAPE 91

Query: 266 ----YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNL----ARSYHS 317
               Y  +A  Y+  H     +H   E L E ALAV     +       L        + 
Sbjct: 92  RTEAYLRLASAYVEQHRNAPQRH--TEGLQE-ALAVLEEAESAGLGGAELLNLRGMILYR 148

Query: 318 KGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCE 377
           +G+ E A      +V   +    +   Y  LG   L LG+   A+    + + + PD+  
Sbjct: 149 RGELEAARDALQRAVALDSTAAAY---YENLGLTYLGLGELEPAVRTLRRAVTLNPDSAS 205

Query: 378 TLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLI-SSDTGAALDAFKTAR 436
               LG  Y+ LG+ E A   L +A  + P   +   +LG  L    +  AA   F+   
Sbjct: 206 ARNQLGSAYLLLGRCEDALFELEQAVSLAPEQLETNFNLGRALFDCGEVRAARPYFEKVV 265

Query: 437 TLLKKAGEEVPIEVLNNIGVIHFEKGEFESA-HQSFKDAL 475
            L   A   +P  V   +  I  E+G +++A  Q+ K AL
Sbjct: 266 ALDVTA---LP-PVYTYLARIDLEEGNYDAAVTQATKGAL 301


>gi|348687602|gb|EGZ27416.1| hypothetical protein PHYSODRAFT_553979 [Phytophthora sojae]
          Length = 986

 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 106/435 (24%), Positives = 175/435 (40%), Gaps = 65/435 (14%)

Query: 166 LGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQ 225
           LG A  E   G  + +++FY RA++++P    A    +  C   LGQ  +A + ++ A+ 
Sbjct: 110 LGNALKEL--GDLAGAVQFYVRAIKLNPRFGDAYN-NLANCYMLLGQNNEAVETYKMAIM 166

Query: 226 LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHF 285
           LDP+ V+A   L  +          +   E+  RA    P  A+A + LA      GQ  
Sbjct: 167 LDPQLVDAHSNLGNLYKVQGRVEDAKLCYEQAIRA---KPSFAIAWSNLAGLLKEDGQ-- 221

Query: 286 LVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPY 345
            +E   +         P  + +Y NL  +    G  E+A   Y ++++   +P+ F   +
Sbjct: 222 -LEAAIDHYREAIRLAPDFADAYSNLGNALKEAGRVEEAIQAYKSALQI--RPN-FAIAH 277

Query: 346 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKI 405
             L       G    A+  F   +++ P+  +    LG+   + GQ+E+A    R A ++
Sbjct: 278 GNLASCYYDAGQMELAIHTFRHAIQLEPNFPDAYNNLGNALRECGQLEQAVTCYRTALQL 337

Query: 406 DPRDAQAFIDLGELLISSDTG---AALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKG 462
            P    A+ +LG  L   D G    AL  + TA  LL +          +NIG +  E+G
Sbjct: 338 KPDHPHAYNNLGNAL--KDKGLVKEALHCYTTAARLLPQFA-----AAHSNIGSVLKEQG 390

Query: 463 EFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPW 522
           + + A   ++ A+                 ID +     F D      + N GN      
Sbjct: 391 KLDQALAHYQQAI----------------TIDPN-----FADA-----YSNMGN------ 418

Query: 523 NKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELV 582
               V  +L RL E I     A      I  K Q + DAY  LA+  K    L  +I   
Sbjct: 419 ----VFKDLCRLEEAIQCYSTA------IRLKPQ-FPDAYSNLASAYKDGGRLDDAITCY 467

Query: 583 NEALKVNGKYPNALS 597
            +AL +   +P+A +
Sbjct: 468 RKALALRPHFPDAFA 482



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 82/354 (23%), Positives = 135/354 (38%), Gaps = 63/354 (17%)

Query: 89  LGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQAS 148
           LG  Y   G++E            A   Y +A R        W     LL   G++E A 
Sbjct: 178 LGNLYKVQGRVED-----------AKLCYEQAIRAKPSFAIAWSNLAGLLKEDGQLEAAI 226

Query: 149 SAFK--IVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLG-IGL 205
             ++  I L  D  +  + LG A  E   GR  ++++ YK ALQ+ P+   AI  G +  
Sbjct: 227 DHYREAIRLAPDFADAYSNLGNALKE--AGRVEEAIQAYKSALQIRPNF--AIAHGNLAS 282

Query: 206 CRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYP 265
           C Y  GQ+  A   F+ A+QL+P   +                                 
Sbjct: 283 CYYDAGQMELAIHTFRHAIQLEPNFPD--------------------------------- 309

Query: 266 YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAG 325
               A N L N     GQ   +EQ            P   H+Y NL  +   KG  ++A 
Sbjct: 310 ----AYNNLGNALRECGQ---LEQAVTCYRTALQLKPDHPHAYNNLGNALKDKGLVKEAL 362

Query: 326 LYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 385
             Y  + + +    +F   +  +G V  + G    AL ++++ + I P+  +    +G++
Sbjct: 363 HCYTTAARLL---PQFAAAHSNIGSVLKEQGKLDQALAHYQQAITIDPNFADAYSNMGNV 419

Query: 386 YVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLISSDTGAALDAFKTARTLL 439
           +  L ++E+A +    A ++ P+   A+ +L       D G   DA    R  L
Sbjct: 420 FKDLCRLEEAIQCYSTAIRLKPQFPDAYSNLASAY--KDGGRLDDAITCYRKAL 471



 Score = 47.0 bits (110), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 74/332 (22%), Positives = 128/332 (38%), Gaps = 23/332 (6%)

Query: 276 NHFFFTGQHFLVEQLTETAL---AVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASV 332
           N       HF +  L+E+           P  + +Y NL  +    GD   A  +Y+ ++
Sbjct: 72  NLLLLGALHFQLGNLSESIFYNQQCIRVAPNFAEAYGNLGNALKELGDLAGAVQFYVRAI 131

Query: 333 KEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQI 392
           K +N    F   Y  L    + LG    A+  ++  + + P   +    LG++Y   G++
Sbjct: 132 K-LNP--RFGDAYNNLANCYMLLGQNNEAVETYKMAIMLDPQLVDAHSNLGNLYKVQGRV 188

Query: 393 EKAQELLRKAAKIDPRDAQAFIDLGELLI-SSDTGAALDAFKTARTLLKKAGEEVPIEVL 451
           E A+    +A +  P  A A+ +L  LL       AA+D ++ A  L          +  
Sbjct: 189 EDAKLCYEQAIRAKPSFAIAWSNLAGLLKEDGQLEAAIDHYREAIRLAPDFA-----DAY 243

Query: 452 NNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQL-FHR 510
           +N+G    E G  E A Q++K AL       +      +   DA         M+L  H 
Sbjct: 244 SNLGNALKEAGRVEEAIQAYKSALQIRPNFAIAHGNLASCYYDAG-------QMELAIHT 296

Query: 511 FENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAK 570
           F    + ++L  N      NL   L +      A   YR  L    D+  AY  L    K
Sbjct: 297 FR---HAIQLEPNFPDAYNNLGNALRECGQLEQAVTCYRTALQLKPDHPHAYNNLGNALK 353

Query: 571 ARNNLQLSIELVNEALKVNGKYPNALSMLGDL 602
            +  ++ ++     A ++  ++  A S +G +
Sbjct: 354 DKGLVKEALHCYTTAARLLPQFAAAHSNIGSV 385



 Score = 46.6 bits (109), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 87/427 (20%), Positives = 173/427 (40%), Gaps = 64/427 (14%)

Query: 348 LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 407
           LG +  +LG+   ++   ++ + + P+  E    LG+   +LG +  A +   +A K++P
Sbjct: 76  LGALHFQLGNLSESIFYNQQCIRVAPNFAEAYGNLGNALKELGDLAGAVQFYVRAIKLNP 135

Query: 408 RDAQAFIDLGEL-LISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFES 466
           R   A+ +L    ++      A++ +K A  L  +      ++  +N+G ++  +G  E 
Sbjct: 136 RFGDAYNNLANCYMLLGQNNEAVETYKMAIMLDPQL-----VDAHSNLGNLYKVQGRVED 190

Query: 467 AHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVT 526
           A   ++ A         + +K    +  ++ + L  +D QL    ++    + L  +   
Sbjct: 191 AKLCYEQA---------IRAKPSFAIAWSNLAGLLKEDGQLEAAIDHYREAIRLAPDFAD 241

Query: 527 VLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEAL 586
              NL   L++      A   Y+  L    ++  A+  LA+       ++L+I     A+
Sbjct: 242 AYSNLGNALKEAGRVEEAIQAYKSALQIRPNFAIAHGNLASCYYDAGQMELAIHTFRHAI 301

Query: 587 KVNGKYPNALSMLGDLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRNE 646
           ++   +P+A + LG+   +     +A   +R A         +A  +LGN     AL+++
Sbjct: 302 QLEPNFPDAYNNLGNALRECGQLEQAVTCYRTALQLKPDH-PHAYNNLGN-----ALKDK 355

Query: 647 KRAPKLEATHLEKAKELYT---RVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQV-- 701
                     +++A   YT   R++ Q  +   A +  G VL E+G+ D +   + Q   
Sbjct: 356 GL--------VKEALHCYTTAARLLPQFAA---AHSNIGSVLKEQGKLDQALAHYQQAIT 404

Query: 702 -----QEAAS--GSVF--------------------VQMPDVWINLAHVYFAQGNFALAM 734
                 +A S  G+VF                     Q PD + NLA  Y   G    A+
Sbjct: 405 IDPNFADAYSNMGNVFKDLCRLEEAIQCYSTAIRLKPQFPDAYSNLASAYKDGGRLDDAI 464

Query: 735 KMYQNCL 741
             Y+  L
Sbjct: 465 TCYRKAL 471



 Score = 42.4 bits (98), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 89/406 (21%), Positives = 156/406 (38%), Gaps = 52/406 (12%)

Query: 346 YGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKI 405
           + L   Q   G ++ AL   E++ E      + L  LG ++ QLG + ++    ++  ++
Sbjct: 40  FNLAHQQYMGGYYQEALRLCEQLYESDAYRTDNLLLLGALHFQLGNLSESIFYNQQCIRV 99

Query: 406 DPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEF 464
            P  A+A+ +LG  L    D   A+  +  A  L  + G     +  NN+   +   G+ 
Sbjct: 100 APNFAEAYGNLGNALKELGDLAGAVQFYVRAIKLNPRFG-----DAYNNLANCYMLLGQN 154

Query: 465 ESAHQSFKDALGDGIWLTLLDSKTKTYVIDASASMLQFKDMQ--------LFHRFENDGN 516
             A +++K A+       +LD +    ++DA +++     +Q         + +      
Sbjct: 155 NEAVETYKMAI-------MLDPQ----LVDAHSNLGNLYKVQGRVEDAKLCYEQAIRAKP 203

Query: 517 HVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQ 576
              + W+      NLA LL++     AA   YR  +    D+ DAY  L    K    ++
Sbjct: 204 SFAIAWS------NLAGLLKEDGQLEAAIDHYREAIRLAPDFADAYSNLGNALKEAGRVE 257

Query: 577 LSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRAASD-ATDGKDSYATLSLG 635
            +I+    AL++   +  A   L            A  TFR A     +  D+Y   +LG
Sbjct: 258 EAIQAYKSALQIRPNFAIAHGNLASCYYDAGQMELAIHTFRHAIQLEPNFPDAYN--NLG 315

Query: 636 NWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSK 695
           N     ALR        E   LE+A   Y   +     + +A N  G  L +KG    + 
Sbjct: 316 N-----ALR--------ECGQLEQAVTCYRTALQLKPDHPHAYNNLGNALKDKGLVKEAL 362

Query: 696 DLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCL 741
             +T      +  +  Q      N+  V   QG    A+  YQ  +
Sbjct: 363 HCYT-----TAARLLPQFAAAHSNIGSVLKEQGKLDQALAHYQQAI 403



 Score = 42.0 bits (97), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 65/305 (21%), Positives = 113/305 (37%), Gaps = 48/305 (15%)

Query: 113 ATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVE 172
           A  +Y +A R+       +   G  L   G VE+A  A+K  L+   +   A    A   
Sbjct: 225 AIDHYREAIRLAPDFADAYSNLGNALKEAGRVEEAIQAYKSALQIRPNFAIAHGNLASCY 284

Query: 173 FNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVE 232
           ++ G+   ++  ++ A+Q+ P+ P A    +G    + GQL +A   ++ ALQL P++  
Sbjct: 285 YDAGQMELAIHTFRHAIQLEPNFPDAYN-NLGNALRECGQLEQAVTCYRTALQLKPDHPH 343

Query: 233 ALVAL--AVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQL 290
           A   L  A+ D          KG+ K                  A H + T    L    
Sbjct: 344 AYNNLGNALKD----------KGLVKE-----------------ALHCYTTAARLL---- 372

Query: 291 TETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQ 350
                      P  + ++ N+      +G  ++A  +Y    + I     F   Y  +G 
Sbjct: 373 -----------PQFAAAHSNIGSVLKEQGKLDQALAHYQ---QAITIDPNFADAYSNMGN 418

Query: 351 VQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDA 410
           V   L     A+  +   + + P   +    L   Y   G+++ A    RKA  + P   
Sbjct: 419 VFKDLCRLEEAIQCYSTAIRLKPQFPDAYSNLASAYKDGGRLDDAITCYRKALALRPHFP 478

Query: 411 QAFID 415
            AF +
Sbjct: 479 DAFAN 483


>gi|348516828|ref|XP_003445939.1| PREDICTED: UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase 110 kDa subunit isoform
           4 [Oreochromis niloticus]
          Length = 1054

 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 86/386 (22%), Positives = 164/386 (42%), Gaps = 24/386 (6%)

Query: 93  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 152
           Y+ LG +  ++ + +E    A ++Y  A R+       ++     L+A G++E A  A+ 
Sbjct: 82  YSNLGNVYKERGQLQE----AIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYV 137

Query: 153 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 210
             L+ + D   V + LG        GR  ++   Y +A++  P+   A    +G      
Sbjct: 138 SALQYNPDLYCVRSDLGNLLKAL--GRLEEAKACYLKAIETQPNFAVAWS-NLGCVFNAQ 194

Query: 211 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 270
           G++  A   F++A+ LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 195 GEIWLAIHHFEKAVTLDPNFLDAYINLGNV---LKEARIFDRAVAGYLRALSLSPNHAVV 251

Query: 271 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 330
              LA  ++  G   L       A+ +  H P    +Y NLA +   KG+  +A   Y  
Sbjct: 252 HGNLACVYYEQGLIDLAIDTYRRAIELQPHFPD---AYCNLANALKEKGNVSEAEECYNT 308

Query: 331 SVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLG 390
           +++      + +     L  ++ + G    A+  + K LE++P+       L  +  Q G
Sbjct: 309 ALRLCPTHADSL---NNLANIKREQGYIEEAVQLYRKALEVFPEFAAAHSNLASVLQQQG 365

Query: 391 QIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGEEVPIE 449
           ++++A    ++A +I P  A A+ ++G  L    D   AL  +  A  +          +
Sbjct: 366 KLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQI-----NPAFAD 420

Query: 450 VLNNIGVIHFEKGEFESAHQSFKDAL 475
             +N+  IH + G    A  S++ AL
Sbjct: 421 AHSNLASIHKDSGNIPEAIASYRTAL 446



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 103/496 (20%), Positives = 194/496 (39%), Gaps = 64/496 (12%)

Query: 142 GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 201
           G+ E A      +   + DN   LL  + + F   R   S  F   A++ +P    A   
Sbjct: 25  GDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPMLAEAYS- 83

Query: 202 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 261
            +G    + GQL +A + ++ AL+L P+ ++  + LA   + A +  G    ++    A 
Sbjct: 84  NLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEG---AVQAYVSAL 140

Query: 262 EIYP--YCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKG 319
           +  P  YC  +   L N     G+   +E+     L      P  + ++ NL   ++++G
Sbjct: 141 QYNPDLYCVRS--DLGNLLKALGR---LEEAKACYLKAIETQPNFAVAWSNLGCVFNAQG 195

Query: 320 DYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETL 379
           +   A  ++    K +     F+  Y  LG V  +   F  A+  + + L + P++    
Sbjct: 196 EIWLAIHHFE---KAVTLDPNFLDAYINLGNVLKEARIFDRAVAGYLRALSLSPNHAVVH 252

Query: 380 KALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLI-SSDTGAALDAFKTARTL 438
             L  +Y + G I+ A +  R+A ++ P    A+ +L   L    +   A + + TA  L
Sbjct: 253 GNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGNVSEAEECYNTALRL 312

Query: 439 LKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVIDASAS 498
                +      LNN+  I  E+G  E A Q ++ AL                       
Sbjct: 313 CPTHADS-----LNNLANIKREQGYIEEAVQLYRKAL----------------------- 344

Query: 499 MLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKYQDY 558
                  ++F  F                  NLA +L+Q      A + Y+  +     +
Sbjct: 345 -------EVFPEF-------------AAAHSNLASVLQQQGKLQEALMHYKEAIRISPTF 384

Query: 559 VDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKETFRA 618
            DAY  +    K   ++Q +++    A+++N  + +A S L  +   + +  +A  ++R 
Sbjct: 385 ADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRT 444

Query: 619 ASD-ATDGKDSYATLS 633
           A     D  D+Y  L+
Sbjct: 445 ALKLKPDFPDAYCNLA 460


>gi|198434517|ref|XP_002131769.1| PREDICTED: similar to O-linked N-acetylglucosamine transferase
           [Ciona intestinalis]
          Length = 1042

 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 70/332 (21%), Positives = 135/332 (40%), Gaps = 48/332 (14%)

Query: 89  LGVYYTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQAS 148
             V ++ LG +   Q E      LA  ++ KA ++D +    ++  G +L      ++A 
Sbjct: 196 FAVAWSNLGCVFNSQGE----IWLAIHHFEKAVKLDPNFLDAYINLGNVLKEARIFDRAV 251

Query: 149 SAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRY 208
           +A+   L    ++       ACV + +G    +++ YKRA+++ P  P A    +     
Sbjct: 252 AAYLRALNLSPNHAVVHGNLACVYYEQGLVDLAIDTYKRAIELQPHFPDAY-CNLANALK 310

Query: 209 KLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCA 268
           + G++G A + + +AL+L P + ++L  LA +     E   I + +    +A E++P  A
Sbjct: 311 EKGKVGDAEECYNKALRLCPTHADSLNNLANIK---REQGLIEEAIALYSKALEVFPEFA 367

Query: 269 MALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYY 328
            A                                   HS  NLA     +G  ++A L+Y
Sbjct: 368 AA-----------------------------------HS--NLASVLQQQGKLQEALLHY 390

Query: 329 MASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQ 388
             +++       F   Y  +G    ++ D + A+  + + ++I P   +    L  ++  
Sbjct: 391 KEAIR---ISPTFADAYSNMGNTLKEMQDVQGAIQCYTRAIQINPAFADAHSNLASVHKD 447

Query: 389 LGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 420
            G I  A +  R A K+ P    A+ +L   L
Sbjct: 448 SGSIPAAIQSYRTALKLKPDFPDAYCNLAHCL 479



 Score = 59.7 bits (143), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 105/500 (21%), Positives = 193/500 (38%), Gaps = 72/500 (14%)

Query: 142 GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 201
           G+ E A      + + + DN   LL  + + F   R   S  F K A++ +P    A   
Sbjct: 41  GDYENAERHCMQLWQQEPDNTGVLLLLSSIHFQCRRLDKSAYFSKHAIKTNPMLAEAYS- 99

Query: 202 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAF 261
            +G    + GQL +A   ++ A++L P+ ++  + LA   + A +  G    +     A 
Sbjct: 100 NLGNVYKERGQLQEALDHYRHAVRLKPDFIDGYINLAAALVTAGDLEG---AVHAYFSAL 156

Query: 262 EIYPYCAMALNYLANHFFFTGQ------HFLVEQLTETALAVTNHGPTKSHSYYNLARSY 315
           +I P      + L N     G+       +L    T+T  AV         ++ NL   +
Sbjct: 157 QINPELYCVRSDLGNLLKALGRLEEAKACYLKAIETQTNFAV---------AWSNLGCVF 207

Query: 316 HSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDN 375
           +S+G+   A  ++  +VK    P+ F+  Y  LG V  +   F  A+  + + L + P++
Sbjct: 208 NSQGEIWLAIHHFEKAVKL--DPN-FLDAYINLGNVLKEARIFDRAVAAYLRALNLSPNH 264

Query: 376 CETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLI-SSDTGAALDAFKT 434
                 L  +Y + G ++ A +  ++A ++ P    A+ +L   L      G A + +  
Sbjct: 265 AVVHGNLACVYYEQGLVDLAIDTYKRAIELQPHFPDAYCNLANALKEKGKVGDAEECYNK 324

Query: 435 ARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTYVID 494
           A  L     +      LNN+  I  E+G  E A   +  AL                   
Sbjct: 325 ALRLCPTHADS-----LNNLANIKREQGLIEEAIALYSKAL------------------- 360

Query: 495 ASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFK 554
                      ++F  F                  NLA +L+Q      A + Y+  +  
Sbjct: 361 -----------EVFPEF-------------AAAHSNLASVLQQQGKLQEALLHYKEAIRI 396

Query: 555 YQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELKNDDWVKAKE 614
              + DAY  +    K   ++Q +I+    A+++N  + +A S L  +   +     A +
Sbjct: 397 SPTFADAYSNMGNTLKEMQDVQGAIQCYTRAIQINPAFADAHSNLASVHKDSGSIPAAIQ 456

Query: 615 TFRAASD-ATDGKDSYATLS 633
           ++R A     D  D+Y  L+
Sbjct: 457 SYRTALKLKPDFPDAYCNLA 476



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 83/391 (21%), Positives = 164/391 (41%), Gaps = 34/391 (8%)

Query: 93  YTYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFK 152
           Y+ LG +  ++ + +E    A  +Y  A R+       ++     L+  G++E A  A+ 
Sbjct: 98  YSNLGNVYKERGQLQE----ALDHYRHAVRLKPDFIDGYINLAAALVTAGDLEGAVHAYF 153

Query: 153 IVLEADRD--NVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKL 210
             L+ + +   V + LG        GR  ++   Y +A++   +   A    +G      
Sbjct: 154 SALQINPELYCVRSDLGNLLKAL--GRLEEAKACYLKAIETQTNFAVAWS-NLGCVFNSQ 210

Query: 211 GQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMA 270
           G++  A   F++A++LDP  ++A + L  +     EA    + +    RA  + P  A+ 
Sbjct: 211 GEIWLAIHHFEKAVKLDPNFLDAYINLGNV---LKEARIFDRAVAAYLRALNLSPNHAVV 267

Query: 271 LNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMA 330
              LA  ++  G   L     + A+ +  H P    +Y NLA +   KG    A   Y  
Sbjct: 268 HGNLACVYYEQGLVDLAIDTYKRAIELQPHFPD---AYCNLANALKEKGKVGDAEECYNK 324

Query: 331 SVKEINKPHEFIFPYYG-----LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHI 385
           +++        + P +      L  ++ + G    A+  + K LE++P+       L  +
Sbjct: 325 ALR--------LCPTHADSLNNLANIKREQGLIEEAIALYSKALEVFPEFAAAHSNLASV 376

Query: 386 YVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELLIS-SDTGAALDAFKTARTLLKKAGE 444
             Q G++++A    ++A +I P  A A+ ++G  L    D   A+  +  A  +      
Sbjct: 377 LQQQGKLQEALLHYKEAIRISPTFADAYSNMGNTLKEMQDVQGAIQCYTRAIQI-----N 431

Query: 445 EVPIEVLNNIGVIHFEKGEFESAHQSFKDAL 475
               +  +N+  +H + G   +A QS++ AL
Sbjct: 432 PAFADAHSNLASVHKDSGSIPAAIQSYRTAL 462



 Score = 40.0 bits (92), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 71/296 (23%), Positives = 114/296 (38%), Gaps = 48/296 (16%)

Query: 548 YRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVN-------GKYPNALSMLG 600
           YR  +    D++D Y+ LAA      +L+ ++     AL++N           N L  LG
Sbjct: 118 YRHAVRLKPDFIDGYINLAAALVTAGDLEGAVHAYFSALQINPELYCVRSDLGNLLKALG 177

Query: 601 DLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKA 660
            LE     ++KA ET          + ++A      W+    + N +    L   H EKA
Sbjct: 178 RLEEAKACYLKAIET----------QTNFAVA----WSNLGCVFNSQGEIWLAIHHFEKA 223

Query: 661 KELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINL 720
            +L    +  +  NL      G VL E   FD +   + +    +     V       NL
Sbjct: 224 VKLDPNFLDAYI-NL------GNVLKEARIFDRAVAAYLRALNLSPNHAVVHG-----NL 271

Query: 721 AHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLA 780
           A VY+ QG   LA+  Y+  +    +  DA     LA    E  +  D ++   +A+ L 
Sbjct: 272 ACVYYEQGLVDLAIDTYKRAIELQPHFPDA--YCNLANALKEKGKVGDAEECYNKALRLC 329

Query: 781 PSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAA-SNL 835
           P++              S + L   +R    +   +A    A+ VF   +AA SNL
Sbjct: 330 PTHAD------------SLNNLANIKREQGLIEEAIALYSKALEVFPEFAAAHSNL 373


>gi|428223794|ref|YP_007107891.1| glycosyl transferase family protein [Geitlerinema sp. PCC 7407]
 gi|427983695|gb|AFY64839.1| glycosyl transferase family 9 [Geitlerinema sp. PCC 7407]
          Length = 2232

 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 71/301 (23%), Positives = 132/301 (43%), Gaps = 16/301 (5%)

Query: 176 GRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALV 235
           GR+  +   Y++ L   P    A++L +G+  Y+ G+  +A   +++AL L P   E   
Sbjct: 31  GRFDQAEPIYRQILAQQPQNLDALQL-LGVLAYQTGRGQEAIALYRQALALKPNYAEVHS 89

Query: 236 ALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETAL 295
            L V      EA  +   +   QRA  + P  A + N L N     G+  + E +     
Sbjct: 90  NLGVA---LKEAGDLEGAIAHCQRAVALKPDYAGSYNNLGNALQAQGR--IPEAIAAYRR 144

Query: 296 AVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKL 355
           AV    P    +  NL  +   +G + +A   Y  +++   +P   + P+  LG    + 
Sbjct: 145 AVELQ-PGFWEALGNLGNNLRQQGQWSEAMACYQQALQA--QPTA-LDPWLNLGAAWREG 200

Query: 356 GDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFID 415
           G++  ++  +E+ + ++P   E    LG  Y + GQ+E A     +A  + P  A+A  +
Sbjct: 201 GNWAESIRCYERAIALHPQAAEAHSGLGITYKEAGQLEGAIACYERAIALQPSFAEAHNN 260

Query: 416 LGELL-ISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDA 474
           LG    I      A+  ++ A T   +      ++  +N+GV+  E G+  +A   ++ A
Sbjct: 261 LGNAFQIQGRLQEAIACYQQALTHQPRY-----VQAHSNLGVVLQEAGQVAAAIAQYRQA 315

Query: 475 L 475
           L
Sbjct: 316 L 316



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 56/217 (25%), Positives = 99/217 (45%), Gaps = 10/217 (4%)

Query: 201  LGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRA 260
            + + L +Y+ GQL +A Q   +     P + EAL  L ++  Q N    + + ++  Q+ 
Sbjct: 1680 MALALHQYRTGQLDQAAQICHQICDQAPSS-EALHLLGLIAQQQNR---LPEALQFYQQG 1735

Query: 261  FEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGD 320
              + P      N   N     GQ     Q  + A+A+    P    +Y NL    H++  
Sbjct: 1736 LTLEPDNPRLHNNFGNVLRELGQMPAAVQHYQRAIALD---PRYGEAYCNLGSVLHAQEQ 1792

Query: 321  YEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLK 380
            +  A   Y  +++  +KP   +  +Y LG    KL  F +AL  +++ + + PD  +  +
Sbjct: 1793 FAAAVTQYRQALQ--HKP-SLLEAHYNLGAALQKLNQFDAALECYQRAIALQPDAPQPYQ 1849

Query: 381  ALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLG 417
             LG    +LG+ E+A    ++A  +DP  A AF +LG
Sbjct: 1850 NLGTALQELGRYEEAIAAYQQAIALDPALADAFYNLG 1886



 Score = 45.1 bits (105), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 66/301 (21%), Positives = 115/301 (38%), Gaps = 46/301 (15%)

Query: 142 GEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLEFYKRALQVHPSCPGAIRL 201
           G  +QA   ++ +L     N+ AL     + +  GR  +++  Y++AL + P+    +  
Sbjct: 31  GRFDQAEPIYRQILAQQPQNLDALQLLGVLAYQTGRGQEAIALYRQALALKPNY-AEVHS 89

Query: 202 GIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAG-IRKGMEKMQRA 260
            +G+   + G L  A    QRA+ L P+   +   L      A +A G I + +   +RA
Sbjct: 90  NLGVALKEAGDLEGAIAHCQRAVALKPDYAGSYNNLG----NALQAQGRIPEAIAAYRRA 145

Query: 261 FEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGD 320
            E+ P    AL  L N+    GQ        + AL      PT    + NL  ++   G+
Sbjct: 146 VELQPGFWEALGNLGNNLRQQGQWSEAMACYQQALQAQ---PTALDPWLNLGAAWREGGN 202

Query: 321 YEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRSALTNFEKVLEIYPDNCETLK 380
           + ++   Y  ++    +  E    + GLG    + G    A+  +E+ + + P   E   
Sbjct: 203 WAESIRCYERAIALHPQAAEA---HSGLGITYKEAGQLEGAIACYERAIALQPSFAEAHN 259

Query: 381 ALGHI-----------------------YVQL-----------GQIEKAQELLRKAAKID 406
            LG+                        YVQ            GQ+  A    R+A  +D
Sbjct: 260 NLGNAFQIQGRLQEAIACYQQALTHQPRYVQAHSNLGVVLQEAGQVAAAIAQYRQALALD 319

Query: 407 P 407
           P
Sbjct: 320 P 320



 Score = 44.3 bits (103), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 32/130 (24%), Positives = 65/130 (50%), Gaps = 8/130 (6%)

Query: 348  LGQVQLKLGDFRSALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDP 407
            LG +  +      AL  +++ L + PDN       G++  +LGQ+  A +  ++A  +DP
Sbjct: 1715 LGLIAQQQNRLPEALQFYQQGLTLEPDNPRLHNNFGNVLRELGQMPAAVQHYQRAIALDP 1774

Query: 408  RDAQAFIDLGELLISSDTGAALDAFKTARTLLKKAGEEVP--IEVLNNIGVIHFEKGEFE 465
            R  +A+ +LG +L + +       F  A T  ++A +  P  +E   N+G    +  +F+
Sbjct: 1775 RYGEAYCNLGSVLHAQEQ------FAAAVTQYRQALQHKPSLLEAHYNLGAALQKLNQFD 1828

Query: 466  SAHQSFKDAL 475
            +A + ++ A+
Sbjct: 1829 AALECYQRAI 1838



 Score = 42.7 bits (99), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 62/240 (25%), Positives = 96/240 (40%), Gaps = 23/240 (9%)

Query: 544 ASVLYRLILFKYQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLG-DL 602
           A  +YR IL +    +DA   L  +A      Q +I L  +AL +   Y    S LG  L
Sbjct: 36  AEPIYRQILAQQPQNLDALQLLGVLAYQTGRGQEAIALYRQALALKPNYAEVHSNLGVAL 95

Query: 603 ELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKE 662
           +   D         RA +   D   SY   +LGN     AL+ + R P+  A        
Sbjct: 96  KEAGDLEGAIAHCQRAVALKPDYAGSYN--NLGN-----ALQAQGRIPEAIAA------- 141

Query: 663 LYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAH 722
            Y R +        A    G  L ++GQ+  +   + Q  +A   ++     D W+NL  
Sbjct: 142 -YRRAVELQPGFWEALGNLGNNLRQQGQWSEAMACYQQALQAQPTAL-----DPWLNLGA 195

Query: 723 VYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPS 782
            +   GN+A +++ Y+  +       +A   L +  T+ EA Q +       RAI L PS
Sbjct: 196 AWREGGNWAESIRCYERAIALHPQAAEAHSGLGI--TYKEAGQLEGAIACYERAIALQPS 253



 Score = 42.0 bits (97), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 30/110 (27%), Positives = 52/110 (47%), Gaps = 4/110 (3%)

Query: 127 EPSTWVGKGQL---LLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSDSLE 183
           +P  W   G L   L  +G+  +A + ++  L+A    +   L         G +++S+ 
Sbjct: 149 QPGFWEALGNLGNNLRQQGQWSEAMACYQQALQAQPTALDPWLNLGAAWREGGNWAESIR 208

Query: 184 FYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEA 233
            Y+RA+ +HP    A   G+G+   + GQL  A   ++RA+ L P   EA
Sbjct: 209 CYERAIALHPQAAEA-HSGLGITYKEAGQLEGAIACYERAIALQPSFAEA 257


>gi|20089086|ref|NP_615161.1| hypothetical protein MA0188 [Methanosarcina acetivorans C2A]
 gi|19913948|gb|AAM03641.1| hypothetical protein (multi-domain) [Methanosarcina acetivorans
           C2A]
          Length = 914

 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 94/372 (25%), Positives = 156/372 (41%), Gaps = 60/372 (16%)

Query: 159 RDNVPALLGQACVEFNRGRYSDSLEFYKRALQV--------HPSCPGAIRLGIGLCRYKL 210
           +D V  L     + +  G Y  +L+F +RAL +        HP    ++    GL    +
Sbjct: 514 KDIVTTLNILDVLYYKMGEYKKALQFSERALAIGETILGVQHPDVATSLDNLAGLYE-SM 572

Query: 211 GQLGKARQAFQRALQ-----LDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEI-- 263
           G   +A Q  +RAL+     L P++ +  + L  +           K +   QR  EI  
Sbjct: 573 GNYKQALQLSERALEIYEKVLGPQHRDVAITLDNLAGLYESMGEYEKALIFYQRTIEIKE 632

Query: 264 ------YPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTN-----HGPTKSHSYYNLA 312
                 +   A +L+ LA  +   G++    QL++ AL +         P  + +  N+A
Sbjct: 633 KVLGPQHSNFATSLDNLAVLYRQMGEYEKALQLSQRALEIYEKVLGPQHPDIATTLNNIA 692

Query: 313 RSYHSKGDYEKAGLYYMASVKEINKPHEFIF-PYY--------GLGQVQLKLGDFRSALT 363
             Y S GDY+K    Y  ++ EIN   E +F P Y         L     ++GD+  AL+
Sbjct: 693 LLYDSMGDYQKTLPLYQRAL-EIN---EKVFGPQYLGIATTLNNLAGFYRRVGDYEKALS 748

Query: 364 NFEKVLEI--------YPDNCETLKALGHIYVQLGQIEKAQELLRKAAKI--------DP 407
             ++ LEI        +PD   TL +L  IY  +G  EKA    +++  I         P
Sbjct: 749 LSQRSLEIDEKVLGSQHPDVARTLNSLALIYENIGDYEKALAFYQRSLDIREKVLGPQHP 808

Query: 408 RDAQAFIDLGELL-ISSDTGAALDAFKTARTLLKKA-GEEVP--IEVLNNIGVIHFEKGE 463
              +   +L  L  I  D   AL  ++    + +KA G + P    +LNN+  +H+  GE
Sbjct: 809 DVGRTLNNLARLYEIMGDHEKALTLYQRTIEIKEKALGPQHPDVATILNNLAGLHYRIGE 868

Query: 464 FESAHQSFKDAL 475
           ++ A   ++ AL
Sbjct: 869 YKKALPLYQRAL 880



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 53/207 (25%), Positives = 94/207 (45%), Gaps = 26/207 (12%)

Query: 228 PENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEI--------YPYCAMALNYLANHFF 279
           PE+ + +  L ++D+   +    +K ++  +RA  I        +P  A +L+ LA  + 
Sbjct: 511 PEHKDIVTTLNILDVLYYKMGEYKKALQFSERALAIGETILGVQHPDVATSLDNLAGLYE 570

Query: 280 FTGQHFLVEQLTETALAVTNH--GPTKSH---SYYNLARSYHSKGDYEKAGLYYMASV-- 332
             G +    QL+E AL +     GP       +  NLA  Y S G+YEKA ++Y  ++  
Sbjct: 571 SMGNYKQALQLSERALEIYEKVLGPQHRDVAITLDNLAGLYESMGEYEKALIFYQRTIEI 630

Query: 333 --KEINKPHE-FIFPYYGLGQVQLKLGDFRSALTNFEKVLEIY--------PDNCETLKA 381
             K +   H  F      L  +  ++G++  AL   ++ LEIY        PD   TL  
Sbjct: 631 KEKVLGPQHSNFATSLDNLAVLYRQMGEYEKALQLSQRALEIYEKVLGPQHPDIATTLNN 690

Query: 382 LGHIYVQLGQIEKAQELLRKAAKIDPR 408
           +  +Y  +G  +K   L ++A +I+ +
Sbjct: 691 IALLYDSMGDYQKTLPLYQRALEINEK 717


>gi|326434099|gb|EGD79669.1| mbre TPR repeat protein [Salpingoeca sp. ATCC 50818]
          Length = 861

 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 91/354 (25%), Positives = 141/354 (39%), Gaps = 69/354 (19%)

Query: 161 NVPALLGQACVEFN-RGRYSDSLEFYKRALQV--------HPSCPGAIRLGIGLCRYKLG 211
           NV AL G     ++ +G ++ ++ FY++AL +        HPS        +G   Y  G
Sbjct: 310 NVAALYGSLGNAYDSKGEHNKAIAFYEKALAIKVETLGEKHPSTAKTYN-NLGTAYYSKG 368

Query: 212 QLGKARQAFQRALQLDPENVEALVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMAL 271
              K    F++AL             AVM                ++   E +P  A   
Sbjct: 369 DYDKTVAYFEKAL-------------AVM----------------VETLGEKHPSTAKTY 399

Query: 272 NYLANHFFFTGQHFLVEQLTETALAVT-----NHGPTKSHSYYNLARSYHSKGDYEKA-G 325
           N L N +   G      +L + ALA+T        P+ + ++ NL  +Y  KGDY++A  
Sbjct: 400 NNLGNAYGDKGDFDKAIELCKKALAITVETLGEKHPSTADTHNNLGNAYKGKGDYDRAVE 459

Query: 326 LYYMA---SVKEINKPHEFIFPYYG-LGQVQLKLGDFRSALTNFEKVLEIYPDN------ 375
           LY  A    V+ + + H      YG +G V    GD+  A+   EK L IY         
Sbjct: 460 LYEKALDIKVETVGEKHPGTAQTYGNIGSVYHSKGDYDKAIAYHEKALAIYVGTLGEKHL 519

Query: 376 --CETLKALGHIYVQLGQIEKAQELLRKAAKID--------PRDAQAFIDLGELLIS-SD 424
              ET  + G  Y   G+ ++A     KA  I         P  A  + +LG    S  D
Sbjct: 520 SIAETYNSFGIAYHSKGEFDRAIHYYDKALAIKVETVGEKHPSTADTYGNLGSAYHSKGD 579

Query: 425 TGAALDAFKTARTLLKKA-GEEVPIEVLN--NIGVIHFEKGEFESAHQSFKDAL 475
              A+   +    +  +A GE+ P    +  NIG++H  +G+ E A  S + AL
Sbjct: 580 YDRAIHFHEKDLAITVEALGEKHPSVATSCFNIGLLHDTRGDKEQACASIQQAL 633



 Score = 44.3 bits (103), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 48/218 (22%), Positives = 90/218 (41%), Gaps = 27/218 (12%)

Query: 174 NRGRYSDSLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEA 233
            +G Y  ++E Y++AL +     G    G       +G +  ++  + +A+       E 
Sbjct: 450 GKGDYDRAVELYEKALDIKVETVGEKHPGTAQTYGNIGSVYHSKGDYDKAIAYH----EK 505

Query: 234 LVALAVMDLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTET 293
            +A+ V  L            EK     E Y   +  + Y +   F    H+  + L   
Sbjct: 506 ALAIYVGTLG-----------EKHLSIAETYN--SFGIAYHSKGEFDRAIHYYDKALAIK 552

Query: 294 ALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYY----MASVKEINKPHEFI-FPYYGL 348
              V    P+ + +Y NL  +YHSKGDY++A  ++      +V+ + + H  +    + +
Sbjct: 553 VETVGEKHPSTADTYGNLGSAYHSKGDYDRAIHFHEKDLAITVEALGEKHPSVATSCFNI 612

Query: 349 GQVQLKLGDFRSALTNFEKVLEIY-----PDNCETLKA 381
           G +    GD   A  + ++ L+I+     PD+  T KA
Sbjct: 613 GLLHDTRGDKEQACASIQQALDIFTSTLGPDHPNTRKA 650


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.319    0.134    0.383 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,700,235,187
Number of Sequences: 23463169
Number of extensions: 564738580
Number of successful extensions: 3222026
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 6660
Number of HSP's successfully gapped in prelim test: 17489
Number of HSP's that attempted gapping in prelim test: 2915331
Number of HSP's gapped (non-prelim): 235462
length of query: 942
length of database: 8,064,228,071
effective HSP length: 152
effective length of query: 790
effective length of database: 8,792,793,679
effective search space: 6946307006410
effective search space used: 6946307006410
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 82 (36.2 bits)