BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 002289
(941 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 225 bits (573), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 123/303 (40%), Positives = 187/303 (61%), Gaps = 17/303 (5%)
Query: 590 SIKIDGVRSFTYGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQG- 648
+ + ++ F+ E+ +A++NF++ +G+GG+GKVYKG L DGT+VAVKR +E QG
Sbjct: 19 EVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGG 78
Query: 649 EKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAK--SKEPLGF 706
E +F TE++ +S HRNL+ L G+C E++LVY +M+NG++ L + S+ PL +
Sbjct: 79 ELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDW 138
Query: 707 AMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 766
R IALGS+RG+ YLH DP + HRD+KA+NILLD +F A V DFGL++L D
Sbjct: 139 PKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-- 196
Query: 767 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK----- 821
HV V+GT G++ PEY T K ++K+DV+ GV+ LEL+TG + +
Sbjct: 197 ----XHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDD 252
Query: 822 --NIVREVNIAYQSSMMFSVIDGNM-GSYPSECVEKFIKLALKCCQDETDARPSMSEVMR 878
++ V + + +++D ++ G+Y E VE+ I++AL C Q RP MSEV+R
Sbjct: 253 DVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVR 312
Query: 879 ELE 881
LE
Sbjct: 313 MLE 315
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 220 bits (561), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 121/304 (39%), Positives = 184/304 (60%), Gaps = 17/304 (5%)
Query: 590 SIKIDGVRSFTYGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQG- 648
+ + ++ F+ E+ +A++NF + +G+GG+GKVYKG L DG +VAVKR +E QG
Sbjct: 11 EVHLGQLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGG 70
Query: 649 EKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAK--SKEPLGF 706
E +F TE++ +S HRNL+ L G+C E++LVY +M+NG++ L + S+ PL +
Sbjct: 71 ELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDW 130
Query: 707 AMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 766
R IALGS+RG+ YLH DP + HRD+KA+NILLD +F A V DFGL++L D
Sbjct: 131 PKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-- 188
Query: 767 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK----- 821
HV V+G G++ PEY T K ++K+DV+ GV+ LEL+TG + +
Sbjct: 189 ----XHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDD 244
Query: 822 --NIVREVNIAYQSSMMFSVIDGNM-GSYPSECVEKFIKLALKCCQDETDARPSMSEVMR 878
++ V + + +++D ++ G+Y E VE+ I++AL C Q RP MSEV+R
Sbjct: 245 DVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVR 304
Query: 879 ELES 882
LE
Sbjct: 305 MLEG 308
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 202 bits (513), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 123/285 (43%), Positives = 172/285 (60%), Gaps = 20/285 (7%)
Query: 607 ATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRN 666
ATNNF+ IG G +GKVYKG+L DG VA+KR S QG +EF TEI+ LS H +
Sbjct: 37 ATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPH 96
Query: 667 LVSLVGYCDEEGEQMLVYEFMSNGTLRDQL--SAKSKEPLGFAMRLSIALGSSRGILYLH 724
LVSL+G+CDE E +L+Y++M NG L+ L S + + RL I +G++RG+ YLH
Sbjct: 97 LVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLH 156
Query: 725 TEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYL 784
T A + HRD+K+ NILLD F K+ DFG+S+ D H+ VVKGT GY+
Sbjct: 157 TRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELD-----QTHLXXVVKGTLGYI 208
Query: 785 DPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVRE-VNIA------YQSSMMF 837
DPEYF+ +LT+KSDVYS GVV E+L I +++ RE VN+A + + +
Sbjct: 209 DPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIV--QSLPREMVNLAEWAVESHNNGQLE 266
Query: 838 SVIDGNMG-SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELE 881
++D N+ E + KF A+KC ++ RPSM +V+ +LE
Sbjct: 267 QIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 200 bits (508), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 122/285 (42%), Positives = 172/285 (60%), Gaps = 20/285 (7%)
Query: 607 ATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRN 666
ATNNF+ IG G +GKVYKG+L DG VA+KR S QG +EF TEI+ LS H +
Sbjct: 37 ATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPH 96
Query: 667 LVSLVGYCDEEGEQMLVYEFMSNGTLRDQL--SAKSKEPLGFAMRLSIALGSSRGILYLH 724
LVSL+G+CDE E +L+Y++M NG L+ L S + + RL I +G++RG+ YLH
Sbjct: 97 LVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLH 156
Query: 725 TEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYL 784
T A + HRD+K+ NILLD F K+ DFG+S+ + H+ VVKGT GY+
Sbjct: 157 TRA---IIHRDVKSINILLDENFVPKITDFGISKKGT-----ELGQTHLXXVVKGTLGYI 208
Query: 785 DPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVRE-VNIA------YQSSMMF 837
DPEYF+ +LT+KSDVYS GVV E+L I +++ RE VN+A + + +
Sbjct: 209 DPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIV--QSLPREMVNLAEWAVESHNNGQLE 266
Query: 838 SVIDGNMG-SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELE 881
++D N+ E + KF A+KC ++ RPSM +V+ +LE
Sbjct: 267 QIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 102/301 (33%), Positives = 162/301 (53%), Gaps = 23/301 (7%)
Query: 597 RSFTYGEMALATNNFNS------STQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGE- 649
SF++ E+ TNNF+ ++G+GG+G VYKG + + TV K A + E
Sbjct: 13 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEE 72
Query: 650 --KEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSA-KSKEPLGF 706
++F EI+ +++ H NLV L+G+ + + LVY +M NG+L D+LS PL +
Sbjct: 73 LKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSW 132
Query: 707 AMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 766
MR IA G++ GI +LH HRDIK++NILLD FTAK++DFGL+R + E
Sbjct: 133 HMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARAS-----E 184
Query: 767 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKN---- 822
+ + + GT Y+ PE L ++T KSD+YS GVV LE++TG+ + +
Sbjct: 185 KFAQTVMXSRIVGTTAYMAPEA-LRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLL 243
Query: 823 IVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELES 882
+ + I + + ID M S VE +A +C ++ + RP + +V + L+
Sbjct: 244 LDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQE 303
Query: 883 I 883
+
Sbjct: 304 M 304
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 160 bits (404), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 102/301 (33%), Positives = 161/301 (53%), Gaps = 23/301 (7%)
Query: 597 RSFTYGEMALATNNFNS------STQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGE- 649
SF++ E+ TNNF+ ++G+GG+G VYKG + + TV K A + E
Sbjct: 13 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEE 72
Query: 650 --KEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSA-KSKEPLGF 706
++F EI+ +++ H NLV L+G+ + + LVY +M NG+L D+LS PL +
Sbjct: 73 LKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSW 132
Query: 707 AMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 766
MR IA G++ GI +LH HRDIK++NILLD FTAK++DFGL+R + E
Sbjct: 133 HMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARAS-----E 184
Query: 767 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKN---- 822
+ + GT Y+ PE L ++T KSD+YS GVV LE++TG+ + +
Sbjct: 185 KFAQTVMXXRIVGTTAYMAPEA-LRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLL 243
Query: 823 IVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELES 882
+ + I + + ID M S VE +A +C ++ + RP + +V + L+
Sbjct: 244 LDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQE 303
Query: 883 I 883
+
Sbjct: 304 M 304
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 159 bits (403), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 102/301 (33%), Positives = 161/301 (53%), Gaps = 23/301 (7%)
Query: 597 RSFTYGEMALATNNFNS------STQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGE- 649
SF++ E+ TNNF+ ++G+GG+G VYKG + + TV K A + E
Sbjct: 7 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEE 66
Query: 650 --KEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSA-KSKEPLGF 706
++F EI+ +++ H NLV L+G+ + + LVY +M NG+L D+LS PL +
Sbjct: 67 LKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSW 126
Query: 707 AMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 766
MR IA G++ GI +LH HRDIK++NILLD FTAK++DFGL+R + E
Sbjct: 127 HMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARAS-----E 178
Query: 767 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKN---- 822
+ + GT Y+ PE L ++T KSD+YS GVV LE++TG+ + +
Sbjct: 179 KFAQXVMXXRIVGTTAYMAPEA-LRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLL 237
Query: 823 IVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELES 882
+ + I + + ID M S VE +A +C ++ + RP + +V + L+
Sbjct: 238 LDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQE 297
Query: 883 I 883
+
Sbjct: 298 M 298
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/299 (33%), Positives = 154/299 (51%), Gaps = 23/299 (7%)
Query: 597 RSFTYGEMALATNNFNS------STQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGE- 649
SF++ E+ TNNF+ + G+GG+G VYKG + + TV K A + E
Sbjct: 4 HSFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEE 63
Query: 650 --KEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSA-KSKEPLGF 706
++F EI+ ++ H NLV L+G+ + + LVY + NG+L D+LS PL +
Sbjct: 64 LKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSW 123
Query: 707 AMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 766
R IA G++ GI +LH HRDIK++NILLD FTAK++DFGL+R + E
Sbjct: 124 HXRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARAS-----E 175
Query: 767 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKN---- 822
+ + GT Y PE L ++T KSD+YS GVV LE++TG+ + +
Sbjct: 176 KFAQXVXXSRIVGTTAYXAPEA-LRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLL 234
Query: 823 IVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELE 881
+ + I + + ID S VE +A +C ++ + RP + +V + L+
Sbjct: 235 LDIKEEIEDEEKTIEDYIDKKXNDADSTSVEAXYSVASQCLHEKKNKRPDIKKVQQLLQ 293
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 88/278 (31%), Positives = 136/278 (48%), Gaps = 21/278 (7%)
Query: 603 EMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEK--EFLTEIQFLS 660
+M + + N +IG G +G V++ G+ VAVK E E+ EFL E+ +
Sbjct: 31 DMDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMK 89
Query: 661 RLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQL-SAKSKEPLGFAMRLSIALGSSRG 719
RL H N+V +G + +V E++S G+L L + ++E L RLS+A ++G
Sbjct: 90 RLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKG 149
Query: 720 ILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKG 779
+ YLH +PP+ HRD+K+ N+L+D K+T KV DFGLSRL + S G
Sbjct: 150 MNYLHNR-NPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFL-------XSKXAAG 201
Query: 780 TPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSV 839
TP ++ PE +KSDVYS GV+ EL T QP + + ++ +
Sbjct: 202 TPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRL--E 259
Query: 840 IDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVM 877
I N+ + +E C +E RPS + +M
Sbjct: 260 IPRNLNPQVAAIIE-------GCWTNEPWKRPSFATIM 290
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/278 (31%), Positives = 136/278 (48%), Gaps = 21/278 (7%)
Query: 603 EMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEK--EFLTEIQFLS 660
+M + + N +IG G +G V++ G+ VAVK E E+ EFL E+ +
Sbjct: 31 DMDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMK 89
Query: 661 RLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQL-SAKSKEPLGFAMRLSIALGSSRG 719
RL H N+V +G + +V E++S G+L L + ++E L RLS+A ++G
Sbjct: 90 RLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKG 149
Query: 720 ILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKG 779
+ YLH +PP+ HR++K+ N+L+D K+T KV DFGLSRL + S G
Sbjct: 150 MNYLHNR-NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLS-------SKSAAG 201
Query: 780 TPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSV 839
TP ++ PE +KSDVYS GV+ EL T QP + + ++ +
Sbjct: 202 TPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRL--E 259
Query: 840 IDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVM 877
I N+ + +E C +E RPS + +M
Sbjct: 260 IPRNLNPQVAAIIE-------GCWTNEPWKRPSFATIM 290
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 91/281 (32%), Positives = 132/281 (46%), Gaps = 38/281 (13%)
Query: 617 IGQGGYGKVYKGILPDGTVVAVKRAQ----EGSLQGEKEFLTEIQFLSRLHHRNLVSLVG 672
IG GG+GKVY+ G VAVK A+ E Q + E + + L H N+++L G
Sbjct: 15 IGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRG 73
Query: 673 YCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVF 732
C +E LV EF G L LS K P + ++ A+ +RG+ YLH EA P+
Sbjct: 74 VCLKEPNLCLVMEFARGGPLNRVLSGKRIPP---DILVNWAVQIARGMNYLHDEAIVPII 130
Query: 733 HRDIKASNILLDHKF--------TAKVADFGLSRLAPVPDIEGIVPAHVSTVV--KGTPG 782
HRD+K+SNIL+ K K+ DFGL+R H +T + G
Sbjct: 131 HRDLKSSNILILQKVENGDLSNKILKITDFGLAR-----------EWHRTTKMSAAGAYA 179
Query: 783 YLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDG 842
++ PE + SDV+S GV+ ELLTG P + + +AY +M +
Sbjct: 180 WMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRG----IDGLAVAYGVAMNKLAL-- 233
Query: 843 NMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883
PS C E F KL C + +RPS + ++ +L +I
Sbjct: 234 ---PIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 113 bits (283), Expect = 4e-25, Method: Composition-based stats.
Identities = 91/305 (29%), Positives = 141/305 (46%), Gaps = 22/305 (7%)
Query: 595 GVRSFTYGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTV-VAVKRAQEGSLQGEKEFL 653
G S Y + + + ++G G YG+VY+G+ ++ VAVK +E +++ E EFL
Sbjct: 1 GHMSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFL 59
Query: 654 TEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIA 713
E + + H NLV L+G C E ++ EFM+ G L D L +++ + + L +A
Sbjct: 60 KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMA 119
Query: 714 LGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHV 773
S + YL + HRD+ A N L+ KVADFGLSRL + PA
Sbjct: 120 TQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRL--MTGDTYTAPAGA 174
Query: 774 STVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQ 832
+K T PE +K + KSDV++ GV+ E+ T GM P G ++ + + +
Sbjct: 175 KFPIKWTA----PESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYP-GIDLSQVYELLEK 229
Query: 833 SSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDT 892
M P C EK +L C Q RPS +E+ + E+++ SD
Sbjct: 230 DYRM---------ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDE 280
Query: 893 KTPEF 897
E
Sbjct: 281 VEKEL 285
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 113 bits (282), Expect = 5e-25, Method: Composition-based stats.
Identities = 90/302 (29%), Positives = 140/302 (46%), Gaps = 22/302 (7%)
Query: 598 SFTYGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTV-VAVKRAQEGSLQGEKEFLTEI 656
S Y + + + ++G G YG+VY+G+ ++ VAVK +E +++ E EFL E
Sbjct: 3 SPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEA 61
Query: 657 QFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGS 716
+ + H NLV L+G C E ++ EFM+ G L D L +++ + + L +A
Sbjct: 62 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQI 121
Query: 717 SRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTV 776
S + YL + HRD+ A N L+ KVADFGLSRL + PA
Sbjct: 122 SSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRL--MTGDTYTAPAGAKFP 176
Query: 777 VKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSM 835
+K T PE +K + KSDV++ GV+ E+ T GM P G ++ + + +
Sbjct: 177 IKWTA----PESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYP-GIDLSQVYELLEKDYR 231
Query: 836 MFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTP 895
M P C EK +L C Q RPS +E+ + E+++ SD
Sbjct: 232 M---------ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEK 282
Query: 896 EF 897
E
Sbjct: 283 EL 284
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 112 bits (280), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/304 (30%), Positives = 144/304 (47%), Gaps = 35/304 (11%)
Query: 593 IDGVRSFTYGEMALATNNFNSSTQIGQGGYGKVYKGILPDG----TVVAVKRAQEGSLQG 648
+ V+ G +L + FN IG+G +G VY G L D AVK + G
Sbjct: 36 VQAVQHVVIGPSSLIVH-FNEV--IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG 92
Query: 649 E-KEFLTEIQFLSRLHHRNLVSLVGYC-DEEGEQMLVYEFMSNGTLRDQLSAKSKEP--- 703
E +FLTE + H N++SL+G C EG ++V +M +G LR+ + ++ P
Sbjct: 93 EVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK 152
Query: 704 --LGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAP 761
+GF ++++ +G+ YL A HRD+ A N +LD KFT KVADFGL+R
Sbjct: 153 DLIGFGLQVA------KGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--D 201
Query: 762 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 821
+ D E H T K ++ E T K T KSDV+S GV+ EL+T P
Sbjct: 202 MYDKE-YYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV 260
Query: 822 NIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELE 881
N + ++ G P C + ++ LKC + + RPS SE++ +
Sbjct: 261 NTF---------DITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRIS 311
Query: 882 SIWN 885
+I++
Sbjct: 312 AIFS 315
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/304 (30%), Positives = 144/304 (47%), Gaps = 35/304 (11%)
Query: 593 IDGVRSFTYGEMALATNNFNSSTQIGQGGYGKVYKGILPDG----TVVAVKRAQEGSLQG 648
+ V+ G +L + FN IG+G +G VY G L D AVK + G
Sbjct: 16 VQAVQHVVIGPSSLIVH-FNEV--IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG 72
Query: 649 E-KEFLTEIQFLSRLHHRNLVSLVGYC-DEEGEQMLVYEFMSNGTLRDQLSAKSKEP--- 703
E +FLTE + H N++SL+G C EG ++V +M +G LR+ + ++ P
Sbjct: 73 EVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK 132
Query: 704 --LGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAP 761
+GF ++++ +G+ YL A HRD+ A N +LD KFT KVADFGL+R
Sbjct: 133 DLIGFGLQVA------KGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--D 181
Query: 762 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 821
+ D E H T K ++ E T K T KSDV+S GV+ EL+T P
Sbjct: 182 MYDKE-XXSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV 240
Query: 822 NIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELE 881
N + ++ G P C + ++ LKC + + RPS SE++ +
Sbjct: 241 NTF---------DITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRIS 291
Query: 882 SIWN 885
+I++
Sbjct: 292 AIFS 295
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/304 (30%), Positives = 144/304 (47%), Gaps = 35/304 (11%)
Query: 593 IDGVRSFTYGEMALATNNFNSSTQIGQGGYGKVYKGILPDG----TVVAVKRAQEGSLQG 648
+ V+ G +L + FN IG+G +G VY G L D AVK + G
Sbjct: 35 VQAVQHVVIGPSSLIVH-FNEV--IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG 91
Query: 649 E-KEFLTEIQFLSRLHHRNLVSLVGYC-DEEGEQMLVYEFMSNGTLRDQLSAKSKEP--- 703
E +FLTE + H N++SL+G C EG ++V +M +G LR+ + ++ P
Sbjct: 92 EVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK 151
Query: 704 --LGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAP 761
+GF ++++ +G+ YL A HRD+ A N +LD KFT KVADFGL+R
Sbjct: 152 DLIGFGLQVA------KGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--D 200
Query: 762 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 821
+ D E H T K ++ E T K T KSDV+S GV+ EL+T P
Sbjct: 201 MYDKE-YYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV 259
Query: 822 NIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELE 881
N + ++ G P C + ++ LKC + + RPS SE++ +
Sbjct: 260 NTF---------DITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRIS 310
Query: 882 SIWN 885
+I++
Sbjct: 311 AIFS 314
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/304 (30%), Positives = 144/304 (47%), Gaps = 35/304 (11%)
Query: 593 IDGVRSFTYGEMALATNNFNSSTQIGQGGYGKVYKGILPDG----TVVAVKRAQEGSLQG 648
+ V+ G +L + FN IG+G +G VY G L D AVK + G
Sbjct: 17 VQAVQHVVIGPSSLIVH-FNEV--IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG 73
Query: 649 E-KEFLTEIQFLSRLHHRNLVSLVGYC-DEEGEQMLVYEFMSNGTLRDQLSAKSKEP--- 703
E +FLTE + H N++SL+G C EG ++V +M +G LR+ + ++ P
Sbjct: 74 EVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK 133
Query: 704 --LGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAP 761
+GF ++++ +G+ YL A HRD+ A N +LD KFT KVADFGL+R
Sbjct: 134 DLIGFGLQVA------KGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--D 182
Query: 762 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 821
+ D E H T K ++ E T K T KSDV+S GV+ EL+T P
Sbjct: 183 MYDKE-YYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV 241
Query: 822 NIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELE 881
N + ++ G P C + ++ LKC + + RPS SE++ +
Sbjct: 242 NTF---------DITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRIS 292
Query: 882 SIWN 885
+I++
Sbjct: 293 AIFS 296
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 144/304 (47%), Gaps = 35/304 (11%)
Query: 593 IDGVRSFTYGEMALATNNFNSSTQIGQGGYGKVYKGILPDG----TVVAVKRAQEGSLQG 648
+ V+ G +L + FN IG+G +G VY G L D AVK + G
Sbjct: 76 VQAVQHVVIGPSSLIVH-FNEV--IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG 132
Query: 649 E-KEFLTEIQFLSRLHHRNLVSLVGYC-DEEGEQMLVYEFMSNGTLRDQLSAKSKEP--- 703
E +FLTE + H N++SL+G C EG ++V +M +G LR+ + ++ P
Sbjct: 133 EVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK 192
Query: 704 --LGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAP 761
+GF ++++ +G+ +L A HRD+ A N +LD KFT KVADFGL+R
Sbjct: 193 DLIGFGLQVA------KGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMY 243
Query: 762 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 821
+ + + H T K ++ E T K T KSDV+S GV+ EL+T P
Sbjct: 244 DKEFDSV---HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV 300
Query: 822 NIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELE 881
N + ++ G P C + ++ LKC + + RPS SE++ +
Sbjct: 301 NTF---------DITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRIS 351
Query: 882 SIWN 885
+I++
Sbjct: 352 AIFS 355
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 136/286 (47%), Gaps = 24/286 (8%)
Query: 601 YGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTV-VAVKRAQEGSLQGEKEFLTEIQFL 659
Y + + + ++G G YG+VY+G+ ++ VAVK +E +++ E EFL E +
Sbjct: 10 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVM 68
Query: 660 SRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRG 719
+ H NLV L+G C E ++ EFM+ G L D L +++ + + L +A S
Sbjct: 69 KEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 128
Query: 720 ILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKG 779
+ YL + HRD+ A N L+ KVADFGLSRL AH K
Sbjct: 129 MEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLM----TGDTYTAHAGA--KF 179
Query: 780 TPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFS 838
+ PE +K + KSDV++ GV+ E+ T GM P G ++ S ++
Sbjct: 180 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYP-GIDL----------SQVYE 228
Query: 839 VIDGNMG-SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883
+++ + P C EK +L C Q RPS +E+ + E++
Sbjct: 229 LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 144/304 (47%), Gaps = 35/304 (11%)
Query: 593 IDGVRSFTYGEMALATNNFNSSTQIGQGGYGKVYKGILPDG----TVVAVKRAQEGSLQG 648
+ V+ G +L + FN IG+G +G VY G L D AVK + G
Sbjct: 17 VQAVQHVVIGPSSLIVH-FNEV--IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG 73
Query: 649 E-KEFLTEIQFLSRLHHRNLVSLVGYC-DEEGEQMLVYEFMSNGTLRDQLSAKSKEP--- 703
E +FLTE + H N++SL+G C EG ++V +M +G LR+ + ++ P
Sbjct: 74 EVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK 133
Query: 704 --LGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAP 761
+GF ++++ +G+ +L A HRD+ A N +LD KFT KVADFGL+R
Sbjct: 134 DLIGFGLQVA------KGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMY 184
Query: 762 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 821
+ + + H T K ++ E T K T KSDV+S GV+ EL+T P
Sbjct: 185 DKEFDSV---HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV 241
Query: 822 NIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELE 881
N + ++ G P C + ++ LKC + + RPS SE++ +
Sbjct: 242 NTF---------DITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRIS 292
Query: 882 SIWN 885
+I++
Sbjct: 293 AIFS 296
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/304 (30%), Positives = 144/304 (47%), Gaps = 35/304 (11%)
Query: 593 IDGVRSFTYGEMALATNNFNSSTQIGQGGYGKVYKGILPDG----TVVAVKRAQEGSLQG 648
+ V+ G +L + FN IG+G +G VY G L D AVK + G
Sbjct: 16 VQAVQHVVIGPSSLIVH-FNEV--IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG 72
Query: 649 E-KEFLTEIQFLSRLHHRNLVSLVGYC-DEEGEQMLVYEFMSNGTLRDQLSAKSKEP--- 703
E +FLTE + H N++SL+G C EG ++V +M +G LR+ + ++ P
Sbjct: 73 EVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK 132
Query: 704 --LGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAP 761
+GF ++++ +G+ YL A HRD+ A N +LD KFT KVADFGL+R
Sbjct: 133 DLIGFGLQVA------KGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--D 181
Query: 762 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 821
+ D E H T K ++ E T K T KSDV+S GV+ EL+T P
Sbjct: 182 MYDKE-YYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV 240
Query: 822 NIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELE 881
N + ++ G P C + ++ LKC + + RPS SE++ +
Sbjct: 241 NTF---------DITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRIS 291
Query: 882 SIWN 885
+I++
Sbjct: 292 AIFS 295
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 112 bits (279), Expect = 1e-24, Method: Composition-based stats.
Identities = 90/305 (29%), Positives = 139/305 (45%), Gaps = 22/305 (7%)
Query: 595 GVRSFTYGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTV-VAVKRAQEGSLQGEKEFL 653
G S Y + + + ++G G YG+VY+G+ ++ VAVK +E +++ E EFL
Sbjct: 1 GHMSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFL 59
Query: 654 TEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIA 713
E + + H NLV L+G C E ++ EFM+ G L D L +++ + + L +A
Sbjct: 60 KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMA 119
Query: 714 LGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHV 773
S + YL + HRD+ A N L+ KVADFGLSRL AH
Sbjct: 120 TQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLM----TGDTYTAHA 172
Query: 774 STVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQ 832
K + PE +K + KSDV++ GV+ E+ T GM P G ++ + + +
Sbjct: 173 GA--KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYP-GIDLSQVYELLEK 229
Query: 833 SSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDT 892
M P C EK +L C Q RPS +E+ + E+++ SD
Sbjct: 230 DYRM---------ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDE 280
Query: 893 KTPEF 897
E
Sbjct: 281 VEKEL 285
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 144/304 (47%), Gaps = 35/304 (11%)
Query: 593 IDGVRSFTYGEMALATNNFNSSTQIGQGGYGKVYKGILPDG----TVVAVKRAQEGSLQG 648
+ V+ G +L + FN IG+G +G VY G L D AVK + G
Sbjct: 22 VQAVQHVVIGPSSLIVH-FNEV--IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG 78
Query: 649 E-KEFLTEIQFLSRLHHRNLVSLVGYC-DEEGEQMLVYEFMSNGTLRDQLSAKSKEP--- 703
E +FLTE + H N++SL+G C EG ++V +M +G LR+ + ++ P
Sbjct: 79 EVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK 138
Query: 704 --LGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAP 761
+GF ++++ +G+ +L A HRD+ A N +LD KFT KVADFGL+R
Sbjct: 139 DLIGFGLQVA------KGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMY 189
Query: 762 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 821
+ + + H T K ++ E T K T KSDV+S GV+ EL+T P
Sbjct: 190 DKEFDSV---HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV 246
Query: 822 NIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELE 881
N + ++ G P C + ++ LKC + + RPS SE++ +
Sbjct: 247 NTF---------DITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRIS 297
Query: 882 SIWN 885
+I++
Sbjct: 298 AIFS 301
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/304 (30%), Positives = 144/304 (47%), Gaps = 35/304 (11%)
Query: 593 IDGVRSFTYGEMALATNNFNSSTQIGQGGYGKVYKGILPDG----TVVAVKRAQEGSLQG 648
+ V+ G +L + FN IG+G +G VY G L D AVK + G
Sbjct: 9 VQAVQHVVIGPSSLIVH-FNEV--IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG 65
Query: 649 E-KEFLTEIQFLSRLHHRNLVSLVGYC-DEEGEQMLVYEFMSNGTLRDQLSAKSKEP--- 703
E +FLTE + H N++SL+G C EG ++V +M +G LR+ + ++ P
Sbjct: 66 EVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK 125
Query: 704 --LGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAP 761
+GF ++++ +G+ YL A HRD+ A N +LD KFT KVADFGL+R
Sbjct: 126 DLIGFGLQVA------KGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--D 174
Query: 762 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 821
+ D E H T K ++ E T K T KSDV+S GV+ EL+T P
Sbjct: 175 MYDKE-YYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV 233
Query: 822 NIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELE 881
N + ++ G P C + ++ LKC + + RPS SE++ +
Sbjct: 234 NTF---------DITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRIS 284
Query: 882 SIWN 885
+I++
Sbjct: 285 AIFS 288
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 144/304 (47%), Gaps = 35/304 (11%)
Query: 593 IDGVRSFTYGEMALATNNFNSSTQIGQGGYGKVYKGILPDG----TVVAVKRAQEGSLQG 648
+ V+ G +L + FN IG+G +G VY G L D AVK + G
Sbjct: 15 VQAVQHVVIGPSSLIVH-FNEV--IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG 71
Query: 649 E-KEFLTEIQFLSRLHHRNLVSLVGYC-DEEGEQMLVYEFMSNGTLRDQLSAKSKEP--- 703
E +FLTE + H N++SL+G C EG ++V +M +G LR+ + ++ P
Sbjct: 72 EVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK 131
Query: 704 --LGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAP 761
+GF ++++ +G+ +L A HRD+ A N +LD KFT KVADFGL+R
Sbjct: 132 DLIGFGLQVA------KGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMY 182
Query: 762 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 821
+ + + H T K ++ E T K T KSDV+S GV+ EL+T P
Sbjct: 183 DKEFDSV---HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV 239
Query: 822 NIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELE 881
N + ++ G P C + ++ LKC + + RPS SE++ +
Sbjct: 240 NTF---------DITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRIS 290
Query: 882 SIWN 885
+I++
Sbjct: 291 AIFS 294
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/304 (30%), Positives = 144/304 (47%), Gaps = 35/304 (11%)
Query: 593 IDGVRSFTYGEMALATNNFNSSTQIGQGGYGKVYKGILPDG----TVVAVKRAQEGSLQG 648
+ V+ G +L + FN IG+G +G VY G L D AVK + G
Sbjct: 14 VQAVQHVVIGPSSLIVH-FNEV--IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG 70
Query: 649 E-KEFLTEIQFLSRLHHRNLVSLVGYC-DEEGEQMLVYEFMSNGTLRDQLSAKSKEP--- 703
E +FLTE + H N++SL+G C EG ++V +M +G LR+ + ++ P
Sbjct: 71 EVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK 130
Query: 704 --LGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAP 761
+GF ++++ +G+ YL A HRD+ A N +LD KFT KVADFGL+R
Sbjct: 131 DLIGFGLQVA------KGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--D 179
Query: 762 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 821
+ D E H T K ++ E T K T KSDV+S GV+ EL+T P
Sbjct: 180 MYDKE-YYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV 238
Query: 822 NIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELE 881
N + ++ G P C + ++ LKC + + RPS SE++ +
Sbjct: 239 NTF---------DITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRIS 289
Query: 882 SIWN 885
+I++
Sbjct: 290 AIFS 293
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 144/304 (47%), Gaps = 35/304 (11%)
Query: 593 IDGVRSFTYGEMALATNNFNSSTQIGQGGYGKVYKGILPDG----TVVAVKRAQEGSLQG 648
+ V+ G +L + FN IG+G +G VY G L D AVK + G
Sbjct: 18 VQAVQHVVIGPSSLIVH-FNEV--IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG 74
Query: 649 E-KEFLTEIQFLSRLHHRNLVSLVGYC-DEEGEQMLVYEFMSNGTLRDQLSAKSKEP--- 703
E +FLTE + H N++SL+G C EG ++V +M +G LR+ + ++ P
Sbjct: 75 EVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK 134
Query: 704 --LGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAP 761
+GF ++++ +G+ +L A HRD+ A N +LD KFT KVADFGL+R
Sbjct: 135 DLIGFGLQVA------KGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDML 185
Query: 762 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 821
+ + + H T K ++ E T K T KSDV+S GV+ EL+T P
Sbjct: 186 DKEFDSV---HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV 242
Query: 822 NIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELE 881
N + ++ G P C + ++ LKC + + RPS SE++ +
Sbjct: 243 NTF---------DITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRIS 293
Query: 882 SIWN 885
+I++
Sbjct: 294 AIFS 297
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 144/304 (47%), Gaps = 35/304 (11%)
Query: 593 IDGVRSFTYGEMALATNNFNSSTQIGQGGYGKVYKGILPDG----TVVAVKRAQEGSLQG 648
+ V+ G +L + FN IG+G +G VY G L D AVK + G
Sbjct: 18 VQAVQHVVIGPSSLIVH-FNEV--IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG 74
Query: 649 E-KEFLTEIQFLSRLHHRNLVSLVGYC-DEEGEQMLVYEFMSNGTLRDQLSAKSKEP--- 703
E +FLTE + H N++SL+G C EG ++V +M +G LR+ + ++ P
Sbjct: 75 EVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK 134
Query: 704 --LGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAP 761
+GF ++++ +G+ +L A HRD+ A N +LD KFT KVADFGL+R
Sbjct: 135 DLIGFGLQVA------KGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMY 185
Query: 762 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 821
+ + + H T K ++ E T K T KSDV+S GV+ EL+T P
Sbjct: 186 DKEFDSV---HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV 242
Query: 822 NIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELE 881
N + ++ G P C + ++ LKC + + RPS SE++ +
Sbjct: 243 NTF---------DITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRIS 293
Query: 882 SIWN 885
+I++
Sbjct: 294 AIFS 297
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/304 (30%), Positives = 144/304 (47%), Gaps = 35/304 (11%)
Query: 593 IDGVRSFTYGEMALATNNFNSSTQIGQGGYGKVYKGILPDG----TVVAVKRAQEGSLQG 648
+ V+ G +L + FN IG+G +G VY G L D AVK + G
Sbjct: 12 VQAVQHVVIGPSSLIVH-FNEV--IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG 68
Query: 649 E-KEFLTEIQFLSRLHHRNLVSLVGYC-DEEGEQMLVYEFMSNGTLRDQLSAKSKEP--- 703
E +FLTE + H N++SL+G C EG ++V +M +G LR+ + ++ P
Sbjct: 69 EVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK 128
Query: 704 --LGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAP 761
+GF ++++ +G+ YL A HRD+ A N +LD KFT KVADFGL+R
Sbjct: 129 DLIGFGLQVA------KGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--D 177
Query: 762 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 821
+ D E H T K ++ E T K T KSDV+S GV+ EL+T P
Sbjct: 178 MYDKE-YYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV 236
Query: 822 NIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELE 881
N + ++ G P C + ++ LKC + + RPS SE++ +
Sbjct: 237 NTF---------DITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRIS 287
Query: 882 SIWN 885
+I++
Sbjct: 288 AIFS 291
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 136/286 (47%), Gaps = 24/286 (8%)
Query: 601 YGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTV-VAVKRAQEGSLQGEKEFLTEIQFL 659
Y + + + ++G G YG+VY+G+ ++ VAVK +E +++ E EFL E +
Sbjct: 10 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVM 68
Query: 660 SRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRG 719
+ H NLV L+G C E ++ EFM+ G L D L +++ + + L +A S
Sbjct: 69 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 128
Query: 720 ILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKG 779
+ YL + HRD+ A N L+ KVADFGLSRL AH K
Sbjct: 129 MEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLM----TGDTYTAHAGA--KF 179
Query: 780 TPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFS 838
+ PE +K + KSDV++ GV+ E+ T GM P G ++ S ++
Sbjct: 180 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYP-GIDL----------SQVYE 228
Query: 839 VIDGNMG-SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883
+++ + P C EK +L C Q RPS +E+ + E++
Sbjct: 229 LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 144/304 (47%), Gaps = 35/304 (11%)
Query: 593 IDGVRSFTYGEMALATNNFNSSTQIGQGGYGKVYKGILPDG----TVVAVKRAQEGSLQG 648
+ V+ G +L + FN IG+G +G VY G L D AVK + G
Sbjct: 17 VQAVQHVVIGPSSLIVH-FNEV--IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG 73
Query: 649 E-KEFLTEIQFLSRLHHRNLVSLVGYC-DEEGEQMLVYEFMSNGTLRDQLSAKSKEP--- 703
E +FLTE + H N++SL+G C EG ++V +M +G LR+ + ++ P
Sbjct: 74 EVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK 133
Query: 704 --LGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAP 761
+GF ++++ +G+ +L A HRD+ A N +LD KFT KVADFGL+R
Sbjct: 134 DLIGFGLQVA------KGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMY 184
Query: 762 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 821
+ + + H T K ++ E T K T KSDV+S GV+ EL+T P
Sbjct: 185 DKEFDSV---HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV 241
Query: 822 NIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELE 881
N + ++ G P C + ++ LKC + + RPS SE++ +
Sbjct: 242 NTF---------DITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRIS 292
Query: 882 SIWN 885
+I++
Sbjct: 293 AIFS 296
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/304 (30%), Positives = 144/304 (47%), Gaps = 35/304 (11%)
Query: 593 IDGVRSFTYGEMALATNNFNSSTQIGQGGYGKVYKGILPDG----TVVAVKRAQEGSLQG 648
+ V+ G +L + FN IG+G +G VY G L D AVK + G
Sbjct: 17 VQAVQHVVIGPSSLIVH-FNEV--IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG 73
Query: 649 E-KEFLTEIQFLSRLHHRNLVSLVGYC-DEEGEQMLVYEFMSNGTLRDQLSAKSKEP--- 703
E +FLTE + H N++SL+G C EG ++V +M +G LR+ + ++ P
Sbjct: 74 EVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK 133
Query: 704 --LGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAP 761
+GF ++++ +G+ YL A HRD+ A N +LD KFT KVADFGL+R
Sbjct: 134 DLIGFGLQVA------KGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--D 182
Query: 762 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 821
+ D E H T K ++ E T K T KSDV+S GV+ EL+T P
Sbjct: 183 MYDKE-YYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV 241
Query: 822 NIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELE 881
N + ++ G P C + ++ LKC + + RPS SE++ +
Sbjct: 242 NTF---------DITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRIS 292
Query: 882 SIWN 885
+I++
Sbjct: 293 AIFS 296
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 137/299 (45%), Gaps = 22/299 (7%)
Query: 601 YGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTV-VAVKRAQEGSLQGEKEFLTEIQFL 659
Y + + + ++G G YG+VY+G+ ++ VAVK +E +++ E EFL E +
Sbjct: 6 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVM 64
Query: 660 SRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRG 719
+ H NLV L+G C E ++ EFM+ G L D L +++ + + L +A S
Sbjct: 65 KEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 124
Query: 720 ILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKG 779
+ YL + HRD+ A N L+ KVADFGLSRL AH K
Sbjct: 125 MEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLM----TGDTXTAHAGA--KF 175
Query: 780 TPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFS 838
+ PE +K + KSDV++ GV+ E+ T GM P G ++ + + + M
Sbjct: 176 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYP-GIDLSQVYELLEKDYRM-- 232
Query: 839 VIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEF 897
P C EK +L C Q RPS +E+ + E+++ SD E
Sbjct: 233 -------ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKEL 284
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/304 (30%), Positives = 144/304 (47%), Gaps = 35/304 (11%)
Query: 593 IDGVRSFTYGEMALATNNFNSSTQIGQGGYGKVYKGILPDG----TVVAVKRAQEGSLQG 648
+ V+ G +L + FN IG+G +G VY G L D AVK + G
Sbjct: 15 VQAVQHVVIGPSSLIVH-FNEV--IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG 71
Query: 649 E-KEFLTEIQFLSRLHHRNLVSLVGYC-DEEGEQMLVYEFMSNGTLRDQLSAKSKEP--- 703
E +FLTE + H N++SL+G C EG ++V +M +G LR+ + ++ P
Sbjct: 72 EVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK 131
Query: 704 --LGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAP 761
+GF ++++ +G+ YL A HRD+ A N +LD KFT KVADFGL+R
Sbjct: 132 DLIGFGLQVA------KGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--D 180
Query: 762 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 821
+ D E H T K ++ E T K T KSDV+S GV+ EL+T P
Sbjct: 181 MYDKE-YYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV 239
Query: 822 NIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELE 881
N + ++ G P C + ++ LKC + + RPS SE++ +
Sbjct: 240 NTF---------DITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRIS 290
Query: 882 SIWN 885
+I++
Sbjct: 291 AIFS 294
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 111 bits (277), Expect = 2e-24, Method: Composition-based stats.
Identities = 89/302 (29%), Positives = 138/302 (45%), Gaps = 22/302 (7%)
Query: 598 SFTYGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTV-VAVKRAQEGSLQGEKEFLTEI 656
S Y + + + ++G G YG+VY+G+ ++ VAVK +E +++ E EFL E
Sbjct: 15 SPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEA 73
Query: 657 QFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGS 716
+ + H NLV L+G C E ++ EFM+ G L D L +++ + + L +A
Sbjct: 74 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQI 133
Query: 717 SRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTV 776
S + YL + HRD+ A N L+ KVADFGLSRL AH
Sbjct: 134 SSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLM----TGDTYTAHAGA- 185
Query: 777 VKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSM 835
K + PE +K + KSDV++ GV+ E+ T GM P G ++ + + +
Sbjct: 186 -KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYP-GIDLSQVYELLEKDYR 243
Query: 836 MFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTP 895
M P C EK +L C Q RPS +E+ + E+++ SD
Sbjct: 244 M---------ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEK 294
Query: 896 EF 897
E
Sbjct: 295 EL 296
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 111 bits (277), Expect = 2e-24, Method: Composition-based stats.
Identities = 89/305 (29%), Positives = 138/305 (45%), Gaps = 22/305 (7%)
Query: 595 GVRSFTYGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTV-VAVKRAQEGSLQGEKEFL 653
G Y + + + ++G G YG+VY+G+ ++ VAVK +E +++ E EFL
Sbjct: 1 GAMDPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFL 59
Query: 654 TEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIA 713
E + + H NLV L+G C E ++ EFM+ G L D L +++ + + L +A
Sbjct: 60 KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMA 119
Query: 714 LGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHV 773
S + YL + HRD+ A N L+ KVADFGLSRL AH
Sbjct: 120 TQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLM----TGDTYTAHA 172
Query: 774 STVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQ 832
K + PE +K + KSDV++ GV+ E+ T GM P G ++ + + +
Sbjct: 173 GA--KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYP-GIDLSQVYELLEK 229
Query: 833 SSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDT 892
M P C EK +L C Q RPS +E+ + E+++ SD
Sbjct: 230 DYRM---------ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDE 280
Query: 893 KTPEF 897
E
Sbjct: 281 VEKEL 285
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 133/285 (46%), Gaps = 22/285 (7%)
Query: 601 YGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTV-VAVKRAQEGSLQGEKEFLTEIQFL 659
Y + + + ++G G YG+VY+G+ ++ VAVK +E +++ E EFL E +
Sbjct: 10 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVM 68
Query: 660 SRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRG 719
+ H NLV L+G C E ++ EFM+ G L D L +++ + + L +A S
Sbjct: 69 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 128
Query: 720 ILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKG 779
+ YL + HRD+ A N L+ KVADFGLSRL AH K
Sbjct: 129 MEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLM----TGDTXTAHAGA--KF 179
Query: 780 TPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFS 838
+ PE +K + KSDV++ GV+ E+ T GM P G ++ + + + M
Sbjct: 180 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYP-GIDLSQVYELLEKDYRM-- 236
Query: 839 VIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883
P C EK +L C Q RPS +E+ + E++
Sbjct: 237 -------ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 111 bits (277), Expect = 2e-24, Method: Composition-based stats.
Identities = 86/285 (30%), Positives = 133/285 (46%), Gaps = 24/285 (8%)
Query: 616 QIGQGGYGKVYKGILPDGTV-VAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYC 674
++G G YG+VY+G+ ++ VAVK +E +++ E EFL E + + H NLV L+G C
Sbjct: 18 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVC 76
Query: 675 DEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHR 734
E ++ EFM+ G L D L +++ + + L +A S + YL + HR
Sbjct: 77 TREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHR 133
Query: 735 DIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKL 794
D+ A N L+ KVADFGLSRL AH K + PE +K
Sbjct: 134 DLAARNCLVGENHLVKVADFGLSRLM----TGDTFTAHAGA--KFPIKWTAPESLAYNKF 187
Query: 795 TDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG-SYPSECV 852
+ KSDV++ GV+ E+ T GM P S ++ +++ + P C
Sbjct: 188 SIKSDVWAFGVLLWEIATYGMSPYP-----------GIDPSQVYELLEKDYRMERPEGCP 236
Query: 853 EKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEF 897
EK +L C Q RPS +E+ + E+++ SD E
Sbjct: 237 EKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKEL 281
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 140/300 (46%), Gaps = 24/300 (8%)
Query: 601 YGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTV-VAVKRAQEGSLQGEKEFLTEIQFL 659
Y + + + ++G G YG+VY+G+ ++ VAVK +E +++ E EFL E +
Sbjct: 10 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVM 68
Query: 660 SRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRG 719
+ H NLV L+G C E ++ EFM+ G L D L +++ + + L +A S
Sbjct: 69 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA 128
Query: 720 ILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKG 779
+ YL + HRD+ A N L+ KVADFGLSRL AH K
Sbjct: 129 MEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLM----TGDTYTAHAG--AKF 179
Query: 780 TPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFS 838
+ PE +K + KSDV++ GV+ E+ T GM P G ++ S ++
Sbjct: 180 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYP-GIDL----------SQVYE 228
Query: 839 VIDGNMG-SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEF 897
+++ + P C EK +L C Q RPS +E+ + E+++ SD E
Sbjct: 229 LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKEL 288
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 140/300 (46%), Gaps = 24/300 (8%)
Query: 601 YGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTV-VAVKRAQEGSLQGEKEFLTEIQFL 659
Y + + + ++G G YG+VY+G+ ++ VAVK +E +++ E EFL E +
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVM 63
Query: 660 SRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRG 719
+ H NLV L+G C E ++ EFM+ G L D L +++ + + L +A S
Sbjct: 64 KEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA 123
Query: 720 ILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKG 779
+ YL + HRD+ A N L+ KVADFGLSRL AH K
Sbjct: 124 MEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLM----TGDTYTAHAGA--KF 174
Query: 780 TPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFS 838
+ PE +K + KSDV++ GV+ E+ T GM P G ++ S ++
Sbjct: 175 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYP-GIDL----------SQVYE 223
Query: 839 VIDGNMG-SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEF 897
+++ + P C EK +L C Q RPS +E+ + E+++ SD E
Sbjct: 224 LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKEL 283
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 140/300 (46%), Gaps = 24/300 (8%)
Query: 601 YGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTV-VAVKRAQEGSLQGEKEFLTEIQFL 659
Y + + + ++G G YG+VY+G+ ++ VAVK +E +++ E EFL E +
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVM 63
Query: 660 SRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRG 719
+ H NLV L+G C E ++ EFM+ G L D L +++ + + L +A S
Sbjct: 64 KEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA 123
Query: 720 ILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKG 779
+ YL + HRD+ A N L+ KVADFGLSRL AH K
Sbjct: 124 MEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLM----TGDTYTAHAGA--KF 174
Query: 780 TPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFS 838
+ PE +K + KSDV++ GV+ E+ T GM P G ++ S ++
Sbjct: 175 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYP-GIDL----------SQVYE 223
Query: 839 VIDGNMG-SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEF 897
+++ + P C EK +L C Q RPS +E+ + E+++ SD E
Sbjct: 224 LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKEL 283
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 140/300 (46%), Gaps = 24/300 (8%)
Query: 601 YGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTV-VAVKRAQEGSLQGEKEFLTEIQFL 659
Y + + + ++G G YG+VY+G+ ++ VAVK +E +++ E EFL E +
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVM 63
Query: 660 SRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRG 719
+ H NLV L+G C E ++ EFM+ G L D L +++ + + L +A S
Sbjct: 64 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA 123
Query: 720 ILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKG 779
+ YL + HRD+ A N L+ KVADFGLSRL AH K
Sbjct: 124 MEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLM----TGDTYTAHAGA--KF 174
Query: 780 TPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFS 838
+ PE +K + KSDV++ GV+ E+ T GM P G ++ S ++
Sbjct: 175 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYP-GIDL----------SQVYE 223
Query: 839 VIDGNMG-SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEF 897
+++ + P C EK +L C Q RPS +E+ + E+++ SD E
Sbjct: 224 LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKEL 283
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 137/299 (45%), Gaps = 22/299 (7%)
Query: 601 YGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTV-VAVKRAQEGSLQGEKEFLTEIQFL 659
Y + + + ++G G YG+VY+G+ ++ VAVK +E +++ E EFL E +
Sbjct: 212 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVM 270
Query: 660 SRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRG 719
+ H NLV L+G C E ++ EFM+ G L D L +++ + + L +A S
Sbjct: 271 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA 330
Query: 720 ILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKG 779
+ YL + HR++ A N L+ KVADFGLSRL AH K
Sbjct: 331 MEYLEKKN---FIHRNLAARNCLVGENHLVKVADFGLSRLM----TGDTYTAHAG--AKF 381
Query: 780 TPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFS 838
+ PE +K + KSDV++ GV+ E+ T GM P G ++ + + + M
Sbjct: 382 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYP-GIDLSQVYELLEKDYRM-- 438
Query: 839 VIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEF 897
P C EK +L C Q RPS +E+ + E+++ SD E
Sbjct: 439 -------ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKEL 490
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 137/299 (45%), Gaps = 22/299 (7%)
Query: 601 YGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTV-VAVKRAQEGSLQGEKEFLTEIQFL 659
Y + + + ++G G YG+VY+G+ ++ VAVK +E +++ E EFL E +
Sbjct: 10 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVM 68
Query: 660 SRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRG 719
+ H NLV L+G C E ++ EFM+ G L D L +++ + + L +A S
Sbjct: 69 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 128
Query: 720 ILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKG 779
+ YL + HRD+ A N L+ KVADFGLSRL AH K
Sbjct: 129 MEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLM----TGDTYTAHAGA--KF 179
Query: 780 TPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFS 838
+ PE +K + KSDV++ GV+ E+ T GM P G ++ + + + M
Sbjct: 180 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYP-GIDLSQVYELLEKDYRM-- 236
Query: 839 VIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEF 897
P C EK +L C Q RPS +E+ + E+++ SD E
Sbjct: 237 -------ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKEL 288
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 140/300 (46%), Gaps = 24/300 (8%)
Query: 601 YGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTV-VAVKRAQEGSLQGEKEFLTEIQFL 659
Y + + + ++G G YG+VY+G+ ++ VAVK +E +++ E EFL E +
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVM 63
Query: 660 SRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRG 719
+ H NLV L+G C E ++ EFM+ G L D L +++ + + L +A S
Sbjct: 64 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA 123
Query: 720 ILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKG 779
+ YL + HRD+ A N L+ KVADFGLSRL AH K
Sbjct: 124 MEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLM----TGDTYTAHAGA--KF 174
Query: 780 TPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFS 838
+ PE +K + KSDV++ GV+ E+ T GM P G ++ S ++
Sbjct: 175 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYP-GIDL----------SQVYE 223
Query: 839 VIDGNMG-SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEF 897
+++ + P C EK +L C Q RPS +E+ + E+++ SD E
Sbjct: 224 LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKEL 283
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 110 bits (275), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 137/299 (45%), Gaps = 22/299 (7%)
Query: 601 YGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTV-VAVKRAQEGSLQGEKEFLTEIQFL 659
Y + + + ++G G YG+VY+G+ ++ VAVK +E +++ E EFL E +
Sbjct: 209 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVM 267
Query: 660 SRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRG 719
+ H NLV L+G C E ++ EFM+ G L D L +++ + + L +A S
Sbjct: 268 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 327
Query: 720 ILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKG 779
+ YL + HR++ A N L+ KVADFGLSRL AH K
Sbjct: 328 MEYLEKKN---FIHRNLAARNCLVGENHLVKVADFGLSRLM----TGDTYTAHAG--AKF 378
Query: 780 TPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFS 838
+ PE +K + KSDV++ GV+ E+ T GM P G ++ + + + M
Sbjct: 379 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYP-GIDLSQVYELLEKDYRM-- 435
Query: 839 VIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEF 897
P C EK +L C Q RPS +E+ + E+++ SD E
Sbjct: 436 -------ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKEL 487
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 110 bits (275), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 137/299 (45%), Gaps = 22/299 (7%)
Query: 601 YGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTV-VAVKRAQEGSLQGEKEFLTEIQFL 659
Y + + + ++G G YG+VY+G+ ++ VAVK +E +++ E EFL E +
Sbjct: 251 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVM 309
Query: 660 SRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRG 719
+ H NLV L+G C E ++ EFM+ G L D L +++ + + L +A S
Sbjct: 310 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 369
Query: 720 ILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKG 779
+ YL + HR++ A N L+ KVADFGLSRL AH K
Sbjct: 370 MEYLEKKN---FIHRNLAARNCLVGENHLVKVADFGLSRLM----TGDTYTAHAG--AKF 420
Query: 780 TPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFS 838
+ PE +K + KSDV++ GV+ E+ T GM P G ++ + + + M
Sbjct: 421 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYP-GIDLSQVYELLEKDYRM-- 477
Query: 839 VIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEF 897
P C EK +L C Q RPS +E+ + E+++ SD E
Sbjct: 478 -------ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKEL 529
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 110 bits (275), Expect = 4e-24, Method: Composition-based stats.
Identities = 86/289 (29%), Positives = 135/289 (46%), Gaps = 22/289 (7%)
Query: 598 SFTYGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTV-VAVKRAQEGSLQGEKEFLTEI 656
S Y + + + ++G G YG+VY+G+ ++ VAVK +E +++ E EFL E
Sbjct: 2 SPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEA 60
Query: 657 QFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGS 716
+ + H NLV L+G C E ++ EFM+ G L D L +++ + + L +A
Sbjct: 61 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQI 120
Query: 717 SRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTV 776
S + YL + HRD+ A N L+ KVADFGLSRL AH
Sbjct: 121 SSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLM----TGDTYTAHAGA- 172
Query: 777 VKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSM 835
K + PE +K + KSDV++ GV+ E+ T GM P G ++ + + +
Sbjct: 173 -KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYP-GIDLSQVYELLEKDYR 230
Query: 836 MFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIW 884
M P C EK +L C Q RPS +E+ + E+++
Sbjct: 231 M---------ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 270
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 110 bits (275), Expect = 4e-24, Method: Composition-based stats.
Identities = 86/289 (29%), Positives = 135/289 (46%), Gaps = 22/289 (7%)
Query: 598 SFTYGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTV-VAVKRAQEGSLQGEKEFLTEI 656
S Y + + + ++G G YG+VY+G+ ++ VAVK +E +++ E EFL E
Sbjct: 2 SPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEA 60
Query: 657 QFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGS 716
+ + H NLV L+G C E ++ EFM+ G L D L +++ + + L +A
Sbjct: 61 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQI 120
Query: 717 SRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTV 776
S + YL + HRD+ A N L+ KVADFGLSRL AH
Sbjct: 121 SSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLM----TGDTYTAHAGA- 172
Query: 777 VKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSM 835
K + PE +K + KSDV++ GV+ E+ T GM P G ++ + + +
Sbjct: 173 -KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYP-GIDLSQVYELLEKDYR 230
Query: 836 MFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIW 884
M P C EK +L C Q RPS +E+ + E+++
Sbjct: 231 M---------ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 270
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 110 bits (274), Expect = 5e-24, Method: Composition-based stats.
Identities = 86/289 (29%), Positives = 135/289 (46%), Gaps = 22/289 (7%)
Query: 598 SFTYGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTV-VAVKRAQEGSLQGEKEFLTEI 656
S Y + + + ++G G YG+VY+G+ ++ VAVK +E +++ E EFL E
Sbjct: 6 SPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEA 64
Query: 657 QFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGS 716
+ + H NLV L+G C E ++ EFM+ G L D L +++ + + L +A
Sbjct: 65 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQI 124
Query: 717 SRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTV 776
S + YL + HRD+ A N L+ KVADFGLSRL AH
Sbjct: 125 SSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLM----TGDTYTAHAGA- 176
Query: 777 VKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSM 835
K + PE +K + KSDV++ GV+ E+ T GM P G ++ + + +
Sbjct: 177 -KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYP-GIDLSQVYELLEKDYR 234
Query: 836 MFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIW 884
M P C EK +L C Q RPS +E+ + E+++
Sbjct: 235 M---------ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 274
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 110 bits (274), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 145/300 (48%), Gaps = 50/300 (16%)
Query: 606 LATNNFNSSTQIGQGGYGKVYKG-ILPDGTVVAVKRAQEGSLQGE-------KEFLTEIQ 657
LA N QIG+GG+G V+KG ++ D +VVA+K G +GE +EF E+
Sbjct: 16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVF 75
Query: 658 FLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSS 717
+S L+H N+V L G +V EF+ G L +L K+ P+ ++++L + L +
Sbjct: 76 IMSNLNHPNIVKLYGLM--HNPPRMVMEFVPCGDLYHRLLDKA-HPIKWSVKLRLMLDIA 132
Query: 718 RGILYLHTEADPPVFHRDIKASNILL-----DHKFTAKVADFGLSRLAPVPDIEGIVPAH 772
GI Y+ + +PP+ HRD+++ NI L + AKVADFGLS+ + H
Sbjct: 133 LGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQS----------VH 181
Query: 773 VSTVVKGTPGYLDPEYFLTHK--LTDKSDVYSLGVVFLELLTGMQPI---SHGK----NI 823
+ + G ++ PE + T+K+D YS ++ +LTG P S+GK N+
Sbjct: 182 SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINM 241
Query: 824 VREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883
+RE +G + P +C + + C + RP S +++EL +
Sbjct: 242 IRE--------------EGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 84/266 (31%), Positives = 127/266 (47%), Gaps = 20/266 (7%)
Query: 616 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD 675
++GQG +G+V+ G T VA+K + G++ E FL E Q + +L H LV L
Sbjct: 274 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVS 332
Query: 676 EEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRD 735
EE +V E+MS G+L D L ++ + L + +A + G+ Y+ HRD
Sbjct: 333 EE-PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRD 388
Query: 736 IKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLT 795
++A+NIL+ KVADFGL+RL + D E +K T PE L + T
Sbjct: 389 LRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTA----PEAALYGRFT 442
Query: 796 DKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKF 855
KSDV+S G++ EL T + + + + REV + V G P EC E
Sbjct: 443 IKSDVWSFGILLTELTTKGR-VPYPGMVNREV--------LDQVERGYRMPCPPECPESL 493
Query: 856 IKLALKCCQDETDARPSMSEVMRELE 881
L +C + E + RP+ + LE
Sbjct: 494 HDLMCQCWRKEPEERPTFEYLQAFLE 519
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 109 bits (273), Expect = 7e-24, Method: Composition-based stats.
Identities = 85/285 (29%), Positives = 133/285 (46%), Gaps = 24/285 (8%)
Query: 616 QIGQGGYGKVYKGILPDGTV-VAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYC 674
++G G +G+VY+G+ ++ VAVK +E +++ E EFL E + + H NLV L+G C
Sbjct: 18 KLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVC 76
Query: 675 DEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHR 734
E ++ EFM+ G L D L +++ + + L +A S + YL + HR
Sbjct: 77 TREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHR 133
Query: 735 DIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKL 794
D+ A N L+ KVADFGLSRL AH K + PE +K
Sbjct: 134 DLAARNCLVGENHLVKVADFGLSRLM----TGDTXTAHAGA--KFPIKWTAPESLAYNKF 187
Query: 795 TDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG-SYPSECV 852
+ KSDV++ GV+ E+ T GM P S ++ +++ + P C
Sbjct: 188 SIKSDVWAFGVLLWEIATYGMSPYP-----------GIDPSQVYELLEKDYRMERPEGCP 236
Query: 853 EKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEF 897
EK +L C Q RPS +E+ + E+++ SD E
Sbjct: 237 EKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKEL 281
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 109 bits (272), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 84/266 (31%), Positives = 127/266 (47%), Gaps = 20/266 (7%)
Query: 616 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD 675
++GQG +G+V+ G T VA+K + G++ E FL E Q + +L H LV L
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 676 EEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRD 735
EE +V E+MS G+L D L ++ + L + +A + G+ Y+ HRD
Sbjct: 250 EE-PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRD 305
Query: 736 IKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLT 795
++A+NIL+ KVADFGL+RL + D E +K T PE L + T
Sbjct: 306 LRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTA----PEAALYGRFT 359
Query: 796 DKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKF 855
KSDV+S G++ EL T + + + + REV + V G P EC E
Sbjct: 360 IKSDVWSFGILLTELTTKGR-VPYPGMVNREV--------LDQVERGYRMPCPPECPESL 410
Query: 856 IKLALKCCQDETDARPSMSEVMRELE 881
L +C + E + RP+ + LE
Sbjct: 411 HDLMCQCWRKEPEERPTFEYLQAFLE 436
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 109 bits (272), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 132/279 (47%), Gaps = 24/279 (8%)
Query: 616 QIGQGGYGKVYKGILPDGTV-VAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYC 674
++G G YG+VY+G+ ++ VAVK +E +++ E EFL E + + H NLV L+G C
Sbjct: 18 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVC 76
Query: 675 DEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHR 734
E ++ EFM+ G L D L +++ + + L +A S + YL + HR
Sbjct: 77 TREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHR 133
Query: 735 DIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKL 794
D+ A N L+ KVADFGLSRL AH K + PE +K
Sbjct: 134 DLAARNCLVGENHLVKVADFGLSRLM----TGDTXTAHAGA--KFPIKWTAPESLAYNKF 187
Query: 795 TDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG-SYPSECV 852
+ KSDV++ GV+ E+ T GM P S ++ +++ + P C
Sbjct: 188 SIKSDVWAFGVLLWEIATYGMSPYP-----------GIDPSQVYELLEKDYRMERPEGCP 236
Query: 853 EKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESD 891
EK +L C Q RPS +E+ + E+++ SD
Sbjct: 237 EKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISD 275
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 109 bits (272), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 84/266 (31%), Positives = 127/266 (47%), Gaps = 20/266 (7%)
Query: 616 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD 675
++GQG +G+V+ G T VA+K + G++ E FL E Q + +L H LV L
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 676 EEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRD 735
EE +V E+MS G+L D L ++ + L + +A + G+ Y+ HRD
Sbjct: 250 EE-PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRD 305
Query: 736 IKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLT 795
++A+NIL+ KVADFGL+RL + D E +K T PE L + T
Sbjct: 306 LRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTA----PEAALYGRFT 359
Query: 796 DKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKF 855
KSDV+S G++ EL T + + + + REV + V G P EC E
Sbjct: 360 IKSDVWSFGILLTELTTKGR-VPYPGMVNREV--------LDQVERGYRMPCPPECPESL 410
Query: 856 IKLALKCCQDETDARPSMSEVMRELE 881
L +C + E + RP+ + LE
Sbjct: 411 HDLMCQCWRKEPEERPTFEYLQAFLE 436
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/266 (31%), Positives = 127/266 (47%), Gaps = 20/266 (7%)
Query: 616 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD 675
++GQG +G+V+ G T VA+K + G++ E FL E Q + +L H LV L
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 676 EEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRD 735
EE +V E+MS G+L D L ++ + L + +A + G+ Y+ HRD
Sbjct: 250 EE-PIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRD 305
Query: 736 IKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLT 795
++A+NIL+ KVADFGL+RL + D E +K T PE L + T
Sbjct: 306 LRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTA----PEAALYGRFT 359
Query: 796 DKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKF 855
KSDV+S G++ EL T + + + + REV + V G P EC E
Sbjct: 360 IKSDVWSFGILLTELTTKGR-VPYPGMVNREV--------LDQVERGYRMPCPPECPESL 410
Query: 856 IKLALKCCQDETDARPSMSEVMRELE 881
L +C + E + RP+ + LE
Sbjct: 411 HDLMCQCWRKEPEERPTFEYLQAFLE 436
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 108 bits (269), Expect = 2e-23, Method: Composition-based stats.
Identities = 84/266 (31%), Positives = 127/266 (47%), Gaps = 20/266 (7%)
Query: 616 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD 675
++GQG +G+V+ G T VA+K + G++ E FL E Q + +L H LV L
Sbjct: 15 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVS 73
Query: 676 EEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRD 735
EE +V E+MS G+L D L ++ + L + +A + G+ Y+ HRD
Sbjct: 74 EE-PIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRD 129
Query: 736 IKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLT 795
++A+NIL+ KVADFGL+RL + D E +K T PE L + T
Sbjct: 130 LRAANILVGENLVCKVADFGLARL--IEDNEXTARQGAKFPIKWTA----PEAALYGRFT 183
Query: 796 DKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKF 855
KSDV+S G++ EL T + + + + REV + V G P EC E
Sbjct: 184 IKSDVWSFGILLTELTTKGR-VPYPGMVNREV--------LDQVERGYRMPCPPECPESL 234
Query: 856 IKLALKCCQDETDARPSMSEVMRELE 881
L +C + E + RP+ + LE
Sbjct: 235 HDLMCQCWRKEPEERPTFEYLQAFLE 260
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 144/300 (48%), Gaps = 50/300 (16%)
Query: 606 LATNNFNSSTQIGQGGYGKVYKG-ILPDGTVVAVKRAQEGSLQGE-------KEFLTEIQ 657
LA N QIG+GG+G V+KG ++ D +VVA+K G +GE +EF E+
Sbjct: 16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVF 75
Query: 658 FLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSS 717
+S L+H N+V L G +V EF+ G L +L K+ P+ ++++L + L +
Sbjct: 76 IMSNLNHPNIVKLYGLM--HNPPRMVMEFVPCGDLYHRLLDKA-HPIKWSVKLRLMLDIA 132
Query: 718 RGILYLHTEADPPVFHRDIKASNILL-----DHKFTAKVADFGLSRLAPVPDIEGIVPAH 772
GI Y+ + +PP+ HRD+++ NI L + AKVADFG S+ + H
Sbjct: 133 LGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQS----------VH 181
Query: 773 VSTVVKGTPGYLDPEYFLTHK--LTDKSDVYSLGVVFLELLTGMQPI---SHGK----NI 823
+ + G ++ PE + T+K+D YS ++ +LTG P S+GK N+
Sbjct: 182 SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINM 241
Query: 824 VREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883
+RE +G + P +C + + C + RP S +++EL +
Sbjct: 242 IRE--------------EGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 107 bits (268), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 144/300 (48%), Gaps = 50/300 (16%)
Query: 606 LATNNFNSSTQIGQGGYGKVYKG-ILPDGTVVAVKRAQEGSLQGE-------KEFLTEIQ 657
LA N QIG+GG+G V+KG ++ D +VVA+K G +GE +EF E+
Sbjct: 16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVF 75
Query: 658 FLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSS 717
+S L+H N+V L G +V EF+ G L +L K+ P+ ++++L + L +
Sbjct: 76 IMSNLNHPNIVKLYGLM--HNPPRMVMEFVPCGDLYHRLLDKA-HPIKWSVKLRLMLDIA 132
Query: 718 RGILYLHTEADPPVFHRDIKASNILL-----DHKFTAKVADFGLSRLAPVPDIEGIVPAH 772
GI Y+ + +PP+ HRD+++ NI L + AKVADF LS+ + H
Sbjct: 133 LGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQS----------VH 181
Query: 773 VSTVVKGTPGYLDPEYFLTHK--LTDKSDVYSLGVVFLELLTGMQPI---SHGK----NI 823
+ + G ++ PE + T+K+D YS ++ +LTG P S+GK N+
Sbjct: 182 SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINM 241
Query: 824 VREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883
+RE +G + P +C + + C + RP S +++EL +
Sbjct: 242 IRE--------------EGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 107 bits (267), Expect = 3e-23, Method: Composition-based stats.
Identities = 84/266 (31%), Positives = 127/266 (47%), Gaps = 20/266 (7%)
Query: 616 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD 675
++GQG +G+V+ G T VA+K + G++ E FL E Q + +L H LV L
Sbjct: 18 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVS 76
Query: 676 EEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRD 735
EE +V E+MS G+L D L ++ + L + +A + G+ Y+ HRD
Sbjct: 77 EE-PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRD 132
Query: 736 IKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLT 795
++A+NIL+ KVADFGL+RL + D E +K T PE L + T
Sbjct: 133 LRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTA----PEAALYGRFT 186
Query: 796 DKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKF 855
KSDV+S G++ EL T + + + + REV + V G P EC E
Sbjct: 187 IKSDVWSFGILLTELTTKGR-VPYPGMVNREV--------LDQVERGYRMPCPPECPESL 237
Query: 856 IKLALKCCQDETDARPSMSEVMRELE 881
L +C + E + RP+ + LE
Sbjct: 238 HDLMCQCWRKEPEERPTFEYLQAFLE 263
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 105 bits (263), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 83/268 (30%), Positives = 125/268 (46%), Gaps = 20/268 (7%)
Query: 614 STQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGY 673
++GQG +G+V+ G T VA+K + G++ E FL E Q + +L H LV L
Sbjct: 190 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPEA-FLQEAQVMKKLRHEKLVQLYAV 248
Query: 674 CDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFH 733
EE +V E+MS G+L D L + + L + +A + G+ Y+ H
Sbjct: 249 VSEE-PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVH 304
Query: 734 RDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHK 793
RD++A+NIL+ KVADFGL RL + D E +K T PE L +
Sbjct: 305 RDLRAANILVGENLVCKVADFGLGRL--IEDNEYTARQGAKFPIKWTA----PEAALYGR 358
Query: 794 LTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVE 853
T KSDV+S G++ EL T + + + + REV + V G P EC E
Sbjct: 359 FTIKSDVWSFGILLTELTTKGR-VPYPGMVNREV--------LDQVERGYRMPCPPECPE 409
Query: 854 KFIKLALKCCQDETDARPSMSEVMRELE 881
L +C + + + RP+ + LE
Sbjct: 410 SLHDLMCQCWRKDPEERPTFEYLQAFLE 437
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 105 bits (262), Expect = 1e-22, Method: Composition-based stats.
Identities = 80/294 (27%), Positives = 132/294 (44%), Gaps = 39/294 (13%)
Query: 616 QIGQGGYGKVYKG----ILP--DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVS 669
++G+G +GKV+ + P D +VAVK ++ +L K+F E + L+ L H ++V
Sbjct: 22 ELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVK 81
Query: 670 LVGYCDEEGEQMLVYEFMSNGTLRDQLSA--------------KSKEPLGFAMRLSIALG 715
G C + ++V+E+M +G L L A ++K LG + L IA
Sbjct: 82 FYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQ 141
Query: 716 SSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVST 775
+ G++YL A HRD+ N L+ K+ DFG+SR D V H
Sbjct: 142 IASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYR-VGGHTML 197
Query: 776 VVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSS 834
++ P PE + K T +SDV+S GV+ E+ T G QP N +
Sbjct: 198 PIRWMP----PESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSN----------TE 243
Query: 835 MMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMP 888
++ + G + P C ++ + L C Q E R ++ E+ + L ++ P
Sbjct: 244 VIECITQGRVLERPRVCPKEVYDVMLGCWQREPQQRLNIKEIYKILHALGKATP 297
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 105 bits (262), Expect = 1e-22, Method: Composition-based stats.
Identities = 83/266 (31%), Positives = 126/266 (47%), Gaps = 20/266 (7%)
Query: 616 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD 675
++GQG +G+V+ G T VA+K + G++ E FL E Q + +L H LV L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 676 EEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRD 735
EE +V E+MS G+L D L + + L + +A + G+ Y+ HRD
Sbjct: 84 EE-PIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRD 139
Query: 736 IKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLT 795
++A+NIL+ KVADFGL+RL + D E +K T PE L + T
Sbjct: 140 LRAANILVGENLVCKVADFGLARL--IEDNEXTARQGAKFPIKWTA----PEAALYGRFT 193
Query: 796 DKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKF 855
KSDV+S G++ EL T + + + + REV + V G P EC E
Sbjct: 194 IKSDVWSFGILLTELTTKGR-VPYPGMVNREV--------LDQVERGYRMPCPPECPESL 244
Query: 856 IKLALKCCQDETDARPSMSEVMRELE 881
L +C + + + RP+ + LE
Sbjct: 245 HDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 105 bits (261), Expect = 2e-22, Method: Composition-based stats.
Identities = 82/266 (30%), Positives = 127/266 (47%), Gaps = 20/266 (7%)
Query: 616 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD 675
++GQG +G+V+ G T VA+K + G++ E FL E Q + +L H LV L
Sbjct: 22 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVS 80
Query: 676 EEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRD 735
EE +V E+M+ G+L D L ++ + L + ++ + G+ Y+ HRD
Sbjct: 81 EE-PIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMN---YVHRD 136
Query: 736 IKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLT 795
++A+NIL+ KVADFGL+RL + D E +K T PE L + T
Sbjct: 137 LRAANILVGENLVCKVADFGLARL--IEDNEWTARQGAKFPIKWTA----PEAALYGRFT 190
Query: 796 DKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKF 855
KSDV+S G++ EL T + + + + REV + V G P EC E
Sbjct: 191 IKSDVWSFGILLTELTTKGR-VPYPGMVNREV--------LDQVERGYRMPCPPECPESL 241
Query: 856 IKLALKCCQDETDARPSMSEVMRELE 881
L +C + E + RP+ + LE
Sbjct: 242 HDLMCQCWRKEPEERPTFEYLQAFLE 267
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 105 bits (261), Expect = 2e-22, Method: Composition-based stats.
Identities = 81/293 (27%), Positives = 127/293 (43%), Gaps = 38/293 (12%)
Query: 616 QIGQGGYGKVY----KGILP--DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVS 669
++G+G +GKV+ +LP D +VAVK +E S ++F E + L+ L H+++V
Sbjct: 25 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 84
Query: 670 LVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKE-------------PLGFAMRLSIALGS 716
G C E ++V+E+M +G L L + + PLG L++A
Sbjct: 85 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 144
Query: 717 SRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTV 776
+ G++YL A HRD+ N L+ K+ DFG+SR DI V
Sbjct: 145 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSR-----DIYSTDYYRVGGR 196
Query: 777 VKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSM 835
++ PE L K T +SDV+S GVV E+ T G QP N +
Sbjct: 197 TMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSN----------TEA 246
Query: 836 MFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMP 888
+ + G P C + + C Q E R S+ +V L+++ P
Sbjct: 247 IDCITQGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQAPP 299
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 105 bits (261), Expect = 2e-22, Method: Composition-based stats.
Identities = 81/293 (27%), Positives = 127/293 (43%), Gaps = 38/293 (12%)
Query: 616 QIGQGGYGKVY----KGILP--DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVS 669
++G+G +GKV+ +LP D +VAVK +E S ++F E + L+ L H+++V
Sbjct: 19 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 78
Query: 670 LVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKE-------------PLGFAMRLSIALGS 716
G C E ++V+E+M +G L L + + PLG L++A
Sbjct: 79 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 138
Query: 717 SRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTV 776
+ G++YL A HRD+ N L+ K+ DFG+SR DI V
Sbjct: 139 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSR-----DIYSTDYYRVGGR 190
Query: 777 VKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSM 835
++ PE L K T +SDV+S GVV E+ T G QP N +
Sbjct: 191 TMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSN----------TEA 240
Query: 836 MFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMP 888
+ + G P C + + C Q E R S+ +V L+++ P
Sbjct: 241 IDCITQGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQAPP 293
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 104 bits (260), Expect = 2e-22, Method: Composition-based stats.
Identities = 83/266 (31%), Positives = 126/266 (47%), Gaps = 20/266 (7%)
Query: 616 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD 675
++GQG +G+V+ G T VA+K + G++ E FL E Q + +L H LV L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 676 EEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRD 735
EE +V E+MS G+L D L + + L + +A + G+ Y+ HRD
Sbjct: 84 EE-PIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRD 139
Query: 736 IKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLT 795
++A+NIL+ KVADFGL+RL + D E +K T PE L + T
Sbjct: 140 LRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTA----PEAALYGRFT 193
Query: 796 DKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKF 855
KSDV+S G++ EL T + + + + REV + V G P EC E
Sbjct: 194 IKSDVWSFGILLTELTTKGR-VPYPGMVNREV--------LDQVERGYRMPCPPECPESL 244
Query: 856 IKLALKCCQDETDARPSMSEVMRELE 881
L +C + + + RP+ + LE
Sbjct: 245 HDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 104 bits (260), Expect = 2e-22, Method: Composition-based stats.
Identities = 82/266 (30%), Positives = 127/266 (47%), Gaps = 20/266 (7%)
Query: 616 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD 675
++GQG +G+V+ G T VA+K + G++ E FL E Q + +L H LV L
Sbjct: 22 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVS 80
Query: 676 EEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRD 735
EE +V E+M+ G+L D L ++ + L + ++ + G+ Y+ HRD
Sbjct: 81 EE-PIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMN---YVHRD 136
Query: 736 IKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLT 795
++A+NIL+ KVADFGL+RL + D E +K T PE L + T
Sbjct: 137 LRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTA----PEAALYGRFT 190
Query: 796 DKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKF 855
KSDV+S G++ EL T + + + + REV + V G P EC E
Sbjct: 191 IKSDVWSFGILLTELTTKGR-VPYPGMVNREV--------LDQVERGYRMPCPPECPESL 241
Query: 856 IKLALKCCQDETDARPSMSEVMRELE 881
L +C + E + RP+ + LE
Sbjct: 242 HDLMCQCWRKEPEERPTFEYLQAFLE 267
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 104 bits (260), Expect = 2e-22, Method: Composition-based stats.
Identities = 83/266 (31%), Positives = 126/266 (47%), Gaps = 20/266 (7%)
Query: 616 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD 675
++GQG +G+V+ G T VA+K + G++ E FL E Q + +L H LV L
Sbjct: 14 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVS 72
Query: 676 EEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRD 735
EE +V E+MS G+L D L + + L + +A + G+ Y+ HRD
Sbjct: 73 EE-PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRD 128
Query: 736 IKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLT 795
++A+NIL+ KVADFGL+RL + D E +K T PE L + T
Sbjct: 129 LRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTA----PEAALYGRFT 182
Query: 796 DKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKF 855
KSDV+S G++ EL T + + + + REV + V G P EC E
Sbjct: 183 IKSDVWSFGILLTELTTKGR-VPYPGMVNREV--------LDQVERGYRMPCPPECPESL 233
Query: 856 IKLALKCCQDETDARPSMSEVMRELE 881
L +C + + + RP+ + LE
Sbjct: 234 HDLMCQCWRKDPEERPTFEYLQAFLE 259
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 104 bits (260), Expect = 2e-22, Method: Composition-based stats.
Identities = 83/266 (31%), Positives = 126/266 (47%), Gaps = 20/266 (7%)
Query: 616 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD 675
++GQG +G+V+ G T VA+K + G++ E FL E Q + +L H LV L
Sbjct: 16 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVS 74
Query: 676 EEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRD 735
EE +V E+MS G+L D L + + L + +A + G+ Y+ HRD
Sbjct: 75 EE-PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRD 130
Query: 736 IKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLT 795
++A+NIL+ KVADFGL+RL + D E +K T PE L + T
Sbjct: 131 LRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTA----PEAALYGRFT 184
Query: 796 DKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKF 855
KSDV+S G++ EL T + + + + REV + V G P EC E
Sbjct: 185 IKSDVWSFGILLTELTTKGR-VPYPGMVNREV--------LDQVERGYRMPCPPECPESL 235
Query: 856 IKLALKCCQDETDARPSMSEVMRELE 881
L +C + + + RP+ + LE
Sbjct: 236 HDLMCQCWRKDPEERPTFEYLQAFLE 261
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 104 bits (260), Expect = 2e-22, Method: Composition-based stats.
Identities = 83/266 (31%), Positives = 126/266 (47%), Gaps = 20/266 (7%)
Query: 616 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD 675
++GQG +G+V+ G T VA+K + G++ E FL E Q + +L H LV L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 676 EEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRD 735
EE +V E+MS G+L D L + + L + +A + G+ Y+ HRD
Sbjct: 84 EE-PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRD 139
Query: 736 IKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLT 795
++A+NIL+ KVADFGL+RL + D E +K T PE L + T
Sbjct: 140 LRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTA----PEAALYGRFT 193
Query: 796 DKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKF 855
KSDV+S G++ EL T + + + + REV + V G P EC E
Sbjct: 194 IKSDVWSFGILLTELTTKGR-VPYPGMVNREV--------LDQVERGYRMPCPPECPESL 244
Query: 856 IKLALKCCQDETDARPSMSEVMRELE 881
L +C + + + RP+ + LE
Sbjct: 245 HDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 104 bits (259), Expect = 3e-22, Method: Composition-based stats.
Identities = 83/266 (31%), Positives = 126/266 (47%), Gaps = 20/266 (7%)
Query: 616 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD 675
++GQG +G+V+ G T VA+K + G++ E FL E Q + +L H LV L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 676 EEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRD 735
EE +V E+MS G+L D L + + L + +A + G+ Y+ HRD
Sbjct: 84 EE-PIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRD 139
Query: 736 IKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLT 795
++A+NIL+ KVADFGL+RL + D E +K T PE L + T
Sbjct: 140 LRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTA----PEAALYGRFT 193
Query: 796 DKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKF 855
KSDV+S G++ EL T + + + + REV + V G P EC E
Sbjct: 194 IKSDVWSFGILLTELTTKGR-VPYPGMVNREV--------LDQVERGYRMPCPPECPESL 244
Query: 856 IKLALKCCQDETDARPSMSEVMRELE 881
L +C + + + RP+ + LE
Sbjct: 245 HDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 129/275 (46%), Gaps = 27/275 (9%)
Query: 617 IGQGGYGKVYKGILPDGT-----VVAVKRAQEGSLQGEK-EFLTEIQFLSRLHHRNLVSL 670
IG G +G+VYKG+L + VA+K + G + ++ +FL E + + H N++ L
Sbjct: 52 IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRL 111
Query: 671 VGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPP 730
G + M++ E+M NG L L K E + + G + G+ YL A+
Sbjct: 112 EGVISKYKPMMIITEYMENGALDKFLREKDGE-FSVLQLVGMLRGIAAGMKYL---ANMN 167
Query: 731 VFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTP-GYLDPEYF 789
HRD+ A NIL++ KV+DFGLSR+ +E A +T P + PE
Sbjct: 168 YVHRDLAARNILVNSNLVCKVSDFGLSRV-----LEDDPEATYTTSGGKIPIRWTAPEAI 222
Query: 790 LTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYP 848
K T SDV+S G+V E++T G +P N +M ++ DG P
Sbjct: 223 SYRKFTSASDVWSFGIVMWEVMTYGERPYWELSN----------HEVMKAINDGFRLPTP 272
Query: 849 SECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883
+C +L ++C Q E RP ++++ L+ +
Sbjct: 273 MDCPSAIYQLMMQCWQQERARRPKFADIVSILDKL 307
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 103 bits (258), Expect = 3e-22, Method: Composition-based stats.
Identities = 83/266 (31%), Positives = 125/266 (46%), Gaps = 20/266 (7%)
Query: 616 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD 675
++GQG +G+V+ G T VA+K + G++ E FL E Q + +L H LV L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 676 EEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRD 735
EE +V E+MS G L D L + + L + +A + G+ Y+ HRD
Sbjct: 84 EE-PIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRD 139
Query: 736 IKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLT 795
++A+NIL+ KVADFGL+RL + D E +K T PE L + T
Sbjct: 140 LRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTA----PEAALYGRFT 193
Query: 796 DKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKF 855
KSDV+S G++ EL T + + + + REV + V G P EC E
Sbjct: 194 IKSDVWSFGILLTELTTKGR-VPYPGMVNREV--------LDQVERGYRMPCPPECPESL 244
Query: 856 IKLALKCCQDETDARPSMSEVMRELE 881
L +C + + + RP+ + LE
Sbjct: 245 HDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 103 bits (257), Expect = 4e-22, Method: Composition-based stats.
Identities = 83/266 (31%), Positives = 125/266 (46%), Gaps = 20/266 (7%)
Query: 616 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD 675
++GQG +G+V+ G T VA+K + G++ E FL E Q + +L H LV L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 676 EEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRD 735
EE +V E+MS G L D L + + L + +A + G+ Y+ HRD
Sbjct: 84 EE-PIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRD 139
Query: 736 IKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLT 795
++A+NIL+ KVADFGL+RL + D E +K T PE L + T
Sbjct: 140 LRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTA----PEAALYGRFT 193
Query: 796 DKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKF 855
KSDV+S G++ EL T + + + + REV + V G P EC E
Sbjct: 194 IKSDVWSFGILLTELTTKGR-VPYPGMVNREV--------LDQVERGYRMPCPPECPESL 244
Query: 856 IKLALKCCQDETDARPSMSEVMRELE 881
L +C + + + RP+ + LE
Sbjct: 245 HDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 103 bits (257), Expect = 4e-22, Method: Composition-based stats.
Identities = 82/266 (30%), Positives = 126/266 (47%), Gaps = 20/266 (7%)
Query: 616 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD 675
++GQG +G+V+ G T VA+K + G++ E FL E Q + ++ H LV L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKIRHEKLVQLYAVVS 83
Query: 676 EEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRD 735
EE +V E+MS G+L D L + + L + +A + G+ Y+ HRD
Sbjct: 84 EE-PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRD 139
Query: 736 IKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLT 795
++A+NIL+ KVADFGL+RL + D E +K T PE L + T
Sbjct: 140 LRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTA----PEAALYGRFT 193
Query: 796 DKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKF 855
KSDV+S G++ EL T + + + + REV + V G P EC E
Sbjct: 194 IKSDVWSFGILLTELTTKGR-VPYPGMVNREV--------LDQVERGYRMPCPPECPESL 244
Query: 856 IKLALKCCQDETDARPSMSEVMRELE 881
L +C + + + RP+ + LE
Sbjct: 245 HDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 127/293 (43%), Gaps = 38/293 (12%)
Query: 616 QIGQGGYGKVY----KGILP--DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVS 669
++G+G +GKV+ +LP D +VAVK +E S ++F E + L+ L H+++V
Sbjct: 48 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 107
Query: 670 LVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKE-------------PLGFAMRLSIALGS 716
G C E ++V+E+M +G L L + + PLG L++A
Sbjct: 108 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 167
Query: 717 SRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTV 776
+ G++YL A HRD+ N L+ K+ DFG+SR DI V
Sbjct: 168 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSR-----DIYSTDYYRVGGR 219
Query: 777 VKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSM 835
++ PE L K T +SDV+S GVV E+ T G QP N +
Sbjct: 220 TMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSN----------TEA 269
Query: 836 MFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMP 888
+ + G P C + + C Q E R S+ +V L+++ P
Sbjct: 270 IDCITQGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQAPP 322
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 132/301 (43%), Gaps = 36/301 (11%)
Query: 606 LATNNFNSSTQIGQGGYGKVYKG----ILP--DGTVVAVKRAQEGSLQGEKEFLTEIQFL 659
+ +N ++G+G +GKV+ + P D +VAVK ++ S K+F E + L
Sbjct: 10 IKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELL 69
Query: 660 SRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFA-----------M 708
+ L H ++V G C E ++V+E+M +G L L A + + A
Sbjct: 70 TNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQ 129
Query: 709 RLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGI 768
L IA + G++YL A HRD+ N L+ K+ DFG+SR D
Sbjct: 130 MLHIAQQIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYR- 185
Query: 769 VPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREV 827
V H ++ P PE + K T +SDV+SLGVV E+ T G QP N
Sbjct: 186 VGGHTMLPIRWMP----PESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN----- 236
Query: 828 NIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMM 887
+ ++ + G + P C ++ +L L C Q E R ++ + L+++
Sbjct: 237 -----NEVIECITQGRVLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKAS 291
Query: 888 P 888
P
Sbjct: 292 P 292
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 103 bits (257), Expect = 5e-22, Method: Composition-based stats.
Identities = 83/266 (31%), Positives = 125/266 (46%), Gaps = 20/266 (7%)
Query: 616 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD 675
++GQG +G+V+ G T VA+K + G++ E FL E Q + +L H LV L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 676 EEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRD 735
EE +V E+MS G+L D L + + L + +A + G+ Y+ HRD
Sbjct: 84 EE-PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRD 139
Query: 736 IKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLT 795
+ A+NIL+ KVADFGL+RL + D E +K T PE L + T
Sbjct: 140 LAAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTA----PEAALYGRFT 193
Query: 796 DKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKF 855
KSDV+S G++ EL T + + + + REV + V G P EC E
Sbjct: 194 IKSDVWSFGILLTELTTKGR-VPYPGMVNREV--------LDQVERGYRMPCPPECPESL 244
Query: 856 IKLALKCCQDETDARPSMSEVMRELE 881
L +C + + + RP+ + LE
Sbjct: 245 HDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 126/271 (46%), Gaps = 26/271 (9%)
Query: 616 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD 675
+IG G +G V+ G + VA+K +EG++ E++F+ E + + +L H LV L G C
Sbjct: 14 EIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCL 72
Query: 676 EEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRD 735
E+ LV+EFM +G L D L + + L + L G+ YL + V HRD
Sbjct: 73 EQAPICLVFEFMEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLE---EASVIHRD 128
Query: 736 IKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLT 795
+ A N L+ KV+DFG++R ST K + PE F + +
Sbjct: 129 LAARNCLVGENQVIKVSDFGMTRFVLDDQYTS------STGTKFPVKWASPEVFSFSRYS 182
Query: 796 DKSDVYSLGVVFLELLT-GMQPISHGKN--IVREVNIAYQSSMMFSVIDGNMGSYPSECV 852
KSDV+S GV+ E+ + G P + N +V +++ ++ P
Sbjct: 183 SKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYK------------PRLAS 230
Query: 853 EKFIKLALKCCQDETDARPSMSEVMRELESI 883
++ C ++ + RP+ S ++R+L +I
Sbjct: 231 THVYQIMNHCWKERPEDRPAFSRLLRQLAAI 261
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 99.8 bits (247), Expect = 6e-21, Method: Composition-based stats.
Identities = 82/273 (30%), Positives = 126/273 (46%), Gaps = 24/273 (8%)
Query: 616 QIGQGGYGKVYKGILPDGTV-VAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYC 674
++G G YG+VY G+ ++ VAVK +E +++ E EFL E + + H NLV L+G C
Sbjct: 39 KLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVC 97
Query: 675 DEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHR 734
E +V E+M G L D L ++E + + L +A S + YL + HR
Sbjct: 98 TLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEKKN---FIHR 154
Query: 735 DIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKL 794
D+ A N L+ KVADFGLSRL AH K + PE +
Sbjct: 155 DLAARNCLVGENHVVKVADFGLSRLM----TGDTYTAHAGA--KFPIKWTAPESLAYNTF 208
Query: 795 TDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVID-GNMGSYPSECV 852
+ KSDV++ GV+ E+ T GM P S ++ +++ G P C
Sbjct: 209 SIKSDVWAFGVLLWEIATYGMSPYP-----------GIDLSQVYDLLEKGYRMEQPEGCP 257
Query: 853 EKFIKLALKCCQDETDARPSMSEVMRELESIWN 885
K +L C + RPS +E + E++++
Sbjct: 258 PKVYELMRACWKWSPADRPSFAETHQAFETMFH 290
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 99.8 bits (247), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 127/283 (44%), Gaps = 22/283 (7%)
Query: 602 GEMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSR 661
G+ + + +IG G +G V+ G + VA+K +EG++ E++F+ E + + +
Sbjct: 3 GKWVIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMK 61
Query: 662 LHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGIL 721
L H LV L G C E+ LV+EFM +G L D L + + L + L G+
Sbjct: 62 LSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMA 120
Query: 722 YLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTP 781
YL + V HRD+ A N L+ KV+DFG++R ST K
Sbjct: 121 YLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTS------STGTKFPV 171
Query: 782 GYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVI 840
+ PE F + + KSDV+S GV+ E+ + G P + N S ++ +
Sbjct: 172 KWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN----------SEVVEDIS 221
Query: 841 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883
G P ++ C ++ + RP+ S ++R+L I
Sbjct: 222 TGFRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEI 264
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 99.8 bits (247), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 127/283 (44%), Gaps = 26/283 (9%)
Query: 604 MALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH 663
M + + +IG G +G V+ G + VA+K +EGS+ E +F+ E + + +L
Sbjct: 22 MVIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIKEGSMS-EDDFIEEAEVMMKLS 80
Query: 664 HRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYL 723
H LV L G C E+ LV+EFM +G L D L + + L + L G+ YL
Sbjct: 81 HPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYL 139
Query: 724 HTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGY 783
+ V HRD+ A N L+ KV+DFG++R ST K +
Sbjct: 140 E---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTS------STGTKFPVKW 190
Query: 784 LDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKN--IVREVNIAYQSSMMFSVI 840
PE F + + KSDV+S GV+ E+ + G P + N +V +++ ++
Sbjct: 191 ASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYK----- 245
Query: 841 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883
P ++ C ++ + RP+ S ++R+L I
Sbjct: 246 -------PRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEI 281
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 99.4 bits (246), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 123/269 (45%), Gaps = 22/269 (8%)
Query: 616 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD 675
+IG G +G V+ G + VA+K +EG++ E++F+ E + + +L H LV L G C
Sbjct: 12 EIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCL 70
Query: 676 EEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRD 735
E+ LV+EFM +G L D L + + L + L G+ YL + V HRD
Sbjct: 71 EQAPICLVFEFMEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLE---EACVIHRD 126
Query: 736 IKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLT 795
+ A N L+ KV+DFG++R ST K + PE F + +
Sbjct: 127 LAARNCLVGENQVIKVSDFGMTRFVLDDQYTS------STGTKFPVKWASPEVFSFSRYS 180
Query: 796 DKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEK 854
KSDV+S GV+ E+ + G P + N S ++ + G P
Sbjct: 181 SKSDVWSFGVLMWEVFSEGKIPYENRSN----------SEVVEDISTGFRLYKPRLASTH 230
Query: 855 FIKLALKCCQDETDARPSMSEVMRELESI 883
++ C ++ + RP+ S ++R+L I
Sbjct: 231 VYQIMNHCWKERPEDRPAFSRLLRQLAEI 259
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 123/269 (45%), Gaps = 22/269 (8%)
Query: 616 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD 675
+IG G +G V+ G + VA+K +EG++ E++F+ E + + +L H LV L G C
Sbjct: 14 EIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCL 72
Query: 676 EEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRD 735
E+ LV+EFM +G L D L + + L + L G+ YL + V HRD
Sbjct: 73 EQAPICLVFEFMEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLE---EACVIHRD 128
Query: 736 IKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLT 795
+ A N L+ KV+DFG++R ST K + PE F + +
Sbjct: 129 LAARNCLVGENQVIKVSDFGMTRFVLDDQYTS------STGTKFPVKWASPEVFSFSRYS 182
Query: 796 DKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEK 854
KSDV+S GV+ E+ + G P + N S ++ + G P
Sbjct: 183 SKSDVWSFGVLMWEVFSEGKIPYENRSN----------SEVVEDISTGFRLYKPRLASTH 232
Query: 855 FIKLALKCCQDETDARPSMSEVMRELESI 883
++ C ++ + RP+ S ++R+L I
Sbjct: 233 VYQIMNHCWKERPEDRPAFSRLLRQLAEI 261
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 143/321 (44%), Gaps = 37/321 (11%)
Query: 582 RRRHSSKTSIKIDGVRSF-----------TYGEMA--LATNNFNSSTQIGQGGYGKVYKG 628
+R H +K+ G+R+F T E A L N + +G G +G+V G
Sbjct: 5 KRLHFGNGHLKLPGLRTFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSG 64
Query: 629 ILP----DGTVVAVKRAQEGSLQGEK-EFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 683
L VA+K + G + ++ +FL E + + H N++ L G + M+V
Sbjct: 65 RLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIV 124
Query: 684 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILL 743
E+M NG+L D K + + G + G+ YL +D HRD+ A NIL+
Sbjct: 125 TEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGFVHRDLAARNILI 180
Query: 744 DHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTP-GYLDPEYFLTHKLTDKSDVYS 802
+ KV+DFGLSR+ +E A +T P + PE K T SDV+S
Sbjct: 181 NSNLVCKVSDFGLSRV-----LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWS 235
Query: 803 LGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKC 862
G+V E++ S+G+ E++ ++ +V +G P +C +L L C
Sbjct: 236 YGIVLWEVM------SYGERPYWEMS---NQDVIKAVDEGYRLPPPMDCPAALYQLMLDC 286
Query: 863 CQDETDARPSMSEVMRELESI 883
Q + + RP +++ L+ +
Sbjct: 287 WQKDRNNRPKFEQIVSILDKL 307
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 98.6 bits (244), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 125/269 (46%), Gaps = 26/269 (9%)
Query: 616 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD 675
++G G +G+V+ G T VA+K + G++ E FL E Q + +L H LV L
Sbjct: 16 RLGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPES-FLEEAQIMKKLKHDKLVQLYAVVS 74
Query: 676 EEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRD 735
EE +V E+M+ G+L D L L + +A + G+ Y+ HRD
Sbjct: 75 EE-PIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMN---YIHRD 130
Query: 736 IKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLT 795
++++NIL+ + K+ADFGL+RL + D E +K T PE L + T
Sbjct: 131 LRSANILVGNGLICKIADFGLARL--IEDNEXTARQGAKFPIKWTA----PEAALYGRFT 184
Query: 796 DKSDVYSLGVVFLELLTGMQ---PISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECV 852
KSDV+S G++ EL+T + P + + ++ +V Y+ P +C
Sbjct: 185 IKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMPC------------PQDCP 232
Query: 853 EKFIKLALKCCQDETDARPSMSEVMRELE 881
+L + C + + + RP+ + LE
Sbjct: 233 ISLHELMIHCWKKDPEERPTFEYLQSFLE 261
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 143/321 (44%), Gaps = 37/321 (11%)
Query: 582 RRRHSSKTSIKIDGVRSF-----------TYGEMA--LATNNFNSSTQIGQGGYGKVYKG 628
+R H +K+ G+R+F T E A L N + +G G +G+V G
Sbjct: 5 KRLHFGNGHLKLPGLRTFVDPHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSG 64
Query: 629 ILP----DGTVVAVKRAQEGSLQGEK-EFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 683
L VA+K + G + ++ +FL E + + H N++ L G + M+V
Sbjct: 65 RLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIV 124
Query: 684 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILL 743
E+M NG+L D K + + G + G+ YL +D HRD+ A NIL+
Sbjct: 125 TEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILI 180
Query: 744 DHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTP-GYLDPEYFLTHKLTDKSDVYS 802
+ KV+DFGLSR+ +E A +T P + PE K T SDV+S
Sbjct: 181 NSNLVCKVSDFGLSRV-----LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWS 235
Query: 803 LGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKC 862
G+V E++ S+G+ E++ ++ +V +G P +C +L L C
Sbjct: 236 YGIVLWEVM------SYGERPYWEMS---NQDVIKAVDEGYRLPPPMDCPAALYQLMLDC 286
Query: 863 CQDETDARPSMSEVMRELESI 883
Q + + RP +++ L+ +
Sbjct: 287 WQKDRNNRPKFEQIVSILDKL 307
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 143/321 (44%), Gaps = 37/321 (11%)
Query: 582 RRRHSSKTSIKIDGVRSF-----------TYGEMA--LATNNFNSSTQIGQGGYGKVYKG 628
+R H +K+ G+R+F T E A L N + +G G +G+V G
Sbjct: 5 KRLHFGNGHLKLPGLRTFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSG 64
Query: 629 ILP----DGTVVAVKRAQEGSLQGEK-EFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 683
L VA+K + G + ++ +FL E + + H N++ L G + M+V
Sbjct: 65 RLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIV 124
Query: 684 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILL 743
E+M NG+L D K + + G + G+ YL +D HRD+ A NIL+
Sbjct: 125 TEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILI 180
Query: 744 DHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTP-GYLDPEYFLTHKLTDKSDVYS 802
+ KV+DFGLSR+ +E A +T P + PE K T SDV+S
Sbjct: 181 NSNLVCKVSDFGLSRV-----LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWS 235
Query: 803 LGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKC 862
G+V E++ S+G+ E++ ++ +V +G P +C +L L C
Sbjct: 236 YGIVLWEVM------SYGERPYWEMS---NQDVIKAVDEGYRLPPPMDCPAALYQLMLDC 286
Query: 863 CQDETDARPSMSEVMRELESI 883
Q + + RP +++ L+ +
Sbjct: 287 WQKDRNNRPKFEQIVSILDKL 307
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 98.2 bits (243), Expect = 2e-20, Method: Composition-based stats.
Identities = 77/286 (26%), Positives = 127/286 (44%), Gaps = 28/286 (9%)
Query: 602 GEMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSR 661
G M L ++G G +G V G VAVK +EGS+ E EF E Q + +
Sbjct: 1 GHMELKREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMS-EDEFFQEAQTMMK 59
Query: 662 LHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSK--EPLGFAMRLSIALGSSRG 719
L H LV G C +E +V E++SNG L + L + K EP + L + G
Sbjct: 60 LSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEP---SQLLEMCYDVCEG 116
Query: 720 ILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKG 779
+ +L + HRD+ A N L+D KV+DFG++R + +VS+V
Sbjct: 117 MAFLESHQ---FIHRDLAARNCLVDRDLCVKVSDFGMTRYV-------LDDQYVSSVGTK 166
Query: 780 TP-GYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMF 837
P + PE F K + KSDV++ G++ E+ + G P ++ S ++
Sbjct: 167 FPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMP----------YDLYTNSEVVL 216
Query: 838 SVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883
V G+ P + ++ C + + RP+ +++ +E +
Sbjct: 217 KVSQGHRLYRPHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPL 262
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 123/270 (45%), Gaps = 28/270 (10%)
Query: 616 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD 675
++G G +G+V+ G T VAVK ++GS+ + FL E + +L H+ LV L
Sbjct: 29 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYAVVT 87
Query: 676 EEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRD 735
+E ++ E+M NG+L D L S L L +A + G+ ++ HRD
Sbjct: 88 QE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRD 143
Query: 736 IKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLT 795
++A+NIL+ + K+ADFGL+RL + D E +K T PE T
Sbjct: 144 LRAANILVSDTLSCKIADFGLARL--IEDNEXTAREGAKFPIKWTA----PEAINYGTFT 197
Query: 796 DKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSY----PSEC 851
KSDV+S G++ E++T HG+ I Y VI Y P C
Sbjct: 198 IKSDVWSFGILLTEIVT------HGR-------IPYPGMTNPEVIQNLERGYRMVRPDNC 244
Query: 852 VEKFIKLALKCCQDETDARPSMSEVMRELE 881
E+ +L C ++ + RP+ + LE
Sbjct: 245 PEELYQLMRLCWKERPEDRPTFDYLRSVLE 274
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 123/270 (45%), Gaps = 28/270 (10%)
Query: 616 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD 675
++G G +G+V+ G T VAVK ++GS+ + FL E + +L H+ LV L
Sbjct: 26 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYAVVT 84
Query: 676 EEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRD 735
+E ++ E+M NG+L D L S L L +A + G+ ++ HRD
Sbjct: 85 QE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRD 140
Query: 736 IKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLT 795
++A+NIL+ + K+ADFGL+RL + D E +K T PE T
Sbjct: 141 LRAANILVSDTLSCKIADFGLARL--IEDNEXTAREGAKFPIKWTA----PEAINYGTFT 194
Query: 796 DKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSY----PSEC 851
KSDV+S G++ E++T HG+ I Y VI Y P C
Sbjct: 195 IKSDVWSFGILLTEIVT------HGR-------IPYPGMTNPEVIQNLERGYRMVRPDNC 241
Query: 852 VEKFIKLALKCCQDETDARPSMSEVMRELE 881
E+ +L C ++ + RP+ + LE
Sbjct: 242 PEELYQLMRLCWKERPEDRPTFDYLRSVLE 271
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 123/270 (45%), Gaps = 28/270 (10%)
Query: 616 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD 675
++G G +G+V+ G T VAVK ++GS+ + FL E + +L H+ LV L
Sbjct: 20 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYAVVT 78
Query: 676 EEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRD 735
+E ++ E+M NG+L D L S L L +A + G+ ++ HRD
Sbjct: 79 QE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRD 134
Query: 736 IKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLT 795
++A+NIL+ + K+ADFGL+RL + D E +K T PE T
Sbjct: 135 LRAANILVSDTLSCKIADFGLARL--IEDNEXTAREGAKFPIKWTA----PEAINYGTFT 188
Query: 796 DKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSY----PSEC 851
KSDV+S G++ E++T HG+ I Y VI Y P C
Sbjct: 189 IKSDVWSFGILLTEIVT------HGR-------IPYPGMTNPEVIQNLERGYRMVRPDNC 235
Query: 852 VEKFIKLALKCCQDETDARPSMSEVMRELE 881
E+ +L C ++ + RP+ + LE
Sbjct: 236 PEELYQLMRLCWKERPEDRPTFDYLRSVLE 265
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 123/270 (45%), Gaps = 28/270 (10%)
Query: 616 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD 675
++G G +G+V+ G T VAVK ++GS+ + FL E + +L H+ LV L
Sbjct: 28 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYAVVT 86
Query: 676 EEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRD 735
+E ++ E+M NG+L D L S L L +A + G+ ++ HRD
Sbjct: 87 QE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRD 142
Query: 736 IKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLT 795
++A+NIL+ + K+ADFGL+RL + D E +K T PE T
Sbjct: 143 LRAANILVSDTLSCKIADFGLARL--IEDNEXTAREGAKFPIKWTA----PEAINYGTFT 196
Query: 796 DKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSY----PSEC 851
KSDV+S G++ E++T HG+ I Y VI Y P C
Sbjct: 197 IKSDVWSFGILLTEIVT------HGR-------IPYPGMTNPEVIQNLERGYRMVRPDNC 243
Query: 852 VEKFIKLALKCCQDETDARPSMSEVMRELE 881
E+ +L C ++ + RP+ + LE
Sbjct: 244 PEELYQLMRLCWKERPEDRPTFDYLRSVLE 273
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 123/270 (45%), Gaps = 28/270 (10%)
Query: 616 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD 675
++G G +G+V+ G T VAVK ++GS+ + FL E + +L H+ LV L
Sbjct: 22 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYAVVT 80
Query: 676 EEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRD 735
+E ++ E+M NG+L D L S L L +A + G+ ++ HRD
Sbjct: 81 QE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRD 136
Query: 736 IKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLT 795
++A+NIL+ + K+ADFGL+RL + D E +K T PE T
Sbjct: 137 LRAANILVSDTLSCKIADFGLARL--IEDNEXTAREGAKFPIKWTA----PEAINYGTFT 190
Query: 796 DKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSY----PSEC 851
KSDV+S G++ E++T HG+ I Y VI Y P C
Sbjct: 191 IKSDVWSFGILLTEIVT------HGR-------IPYPGMTNPEVIQNLERGYRMVRPDNC 237
Query: 852 VEKFIKLALKCCQDETDARPSMSEVMRELE 881
E+ +L C ++ + RP+ + LE
Sbjct: 238 PEELYQLMRLCWKERPEDRPTFDYLRSVLE 267
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 124/270 (45%), Gaps = 28/270 (10%)
Query: 616 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD 675
++G G +G+V+ G T VAVK ++GS+ + FL E + +L H+ LV L
Sbjct: 20 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYAVVT 78
Query: 676 EEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRD 735
+E ++ E+M NG+L D L S L L +A + G+ ++ + HRD
Sbjct: 79 QE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRD 134
Query: 736 IKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLT 795
++A+NIL+ + K+ADFGL+RL + D E +K T PE T
Sbjct: 135 LRAANILVSDTLSCKIADFGLARL--IEDNEXTAREGAKFPIKWTA----PEAINYGTFT 188
Query: 796 DKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSY----PSEC 851
KSDV+S G++ E++T HG+ I Y VI Y P C
Sbjct: 189 IKSDVWSFGILLTEIVT------HGR-------IPYPGMTNPEVIQNLERGYRMVRPDNC 235
Query: 852 VEKFIKLALKCCQDETDARPSMSEVMRELE 881
E+ +L C ++ + RP+ + LE
Sbjct: 236 PEELYQLMRLCWKERPEDRPTFDYLRSVLE 265
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 126/283 (44%), Gaps = 22/283 (7%)
Query: 602 GEMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSR 661
G+ + + +IG G +G V+ G + VA+K +EG++ E++F+ E + + +
Sbjct: 1 GKWVIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMK 59
Query: 662 LHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGIL 721
L H LV L G C E+ LV EFM +G L D L + + L + L G+
Sbjct: 60 LSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMA 118
Query: 722 YLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTP 781
YL + V HRD+ A N L+ KV+DFG++R ST K
Sbjct: 119 YLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTS------STGTKFPV 169
Query: 782 GYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVI 840
+ PE F + + KSDV+S GV+ E+ + G P + N S ++ +
Sbjct: 170 KWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN----------SEVVEDIS 219
Query: 841 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883
G P ++ C ++ + RP+ S ++R+L I
Sbjct: 220 TGFRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEI 262
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 124/270 (45%), Gaps = 28/270 (10%)
Query: 616 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD 675
++G G +G+V+ G T VAVK ++GS+ + FL E + +L H+ LV L
Sbjct: 21 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYAVVT 79
Query: 676 EEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRD 735
+E ++ E+M NG+L D L S L L +A + G+ ++ + HRD
Sbjct: 80 QE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRD 135
Query: 736 IKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLT 795
++A+NIL+ + K+ADFGL+RL + D E +K T PE T
Sbjct: 136 LRAANILVSDTLSCKIADFGLARL--IEDNEXTAREGAKFPIKWTA----PEAINYGTFT 189
Query: 796 DKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSY----PSEC 851
KSDV+S G++ E++T HG+ I Y VI Y P C
Sbjct: 190 IKSDVWSFGILLTEIVT------HGR-------IPYPGMTNPEVIQNLERGYRMVRPDNC 236
Query: 852 VEKFIKLALKCCQDETDARPSMSEVMRELE 881
E+ +L C ++ + RP+ + LE
Sbjct: 237 PEELYQLMRLCWKERPEDRPTFDYLRSVLE 266
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 132/276 (47%), Gaps = 28/276 (10%)
Query: 616 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD 675
+IG G +G VYKG V + + Q + F E+ L + H N++ +GY
Sbjct: 19 RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 78
Query: 676 EEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMR--LSIALGSSRGILYLHTEADPPVFH 733
+ + +V ++ +L L A + F M+ + IA ++RG+ YLH ++ + H
Sbjct: 79 KP-QLAIVTQWCEGSSLYHHLHASETK---FEMKKLIDIARQTARGMDYLHAKS---IIH 131
Query: 734 RDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHK 793
RD+K++NI L T K+ DFGL+ + +H + G+ ++ PE +
Sbjct: 132 RDLKSNNIFLHEDNTVKIGDFGLATVKSRWS-----GSHQFEQLSGSILWMAPEVI---R 183
Query: 794 LTD------KSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSY 847
+ D +SDVY+ G+V EL+TG P S+ N + + + + S+ ++
Sbjct: 184 MQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSL-----SPDLSKV 238
Query: 848 PSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883
S C ++ +L +C + + D RPS ++ E+E +
Sbjct: 239 RSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEEL 274
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 124/270 (45%), Gaps = 28/270 (10%)
Query: 616 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD 675
++G G +G+V+ G T VAVK ++GS+ + FL E + +L H+ LV L
Sbjct: 25 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYAVVT 83
Query: 676 EEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRD 735
+E ++ E+M NG+L D L S L L +A + G+ ++ + HRD
Sbjct: 84 QE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRD 139
Query: 736 IKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLT 795
++A+NIL+ + K+ADFGL+RL + D E +K T PE T
Sbjct: 140 LRAANILVSDTLSCKIADFGLARL--IEDNEYTAREGAKFPIKWTA----PEAINYGTFT 193
Query: 796 DKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSY----PSEC 851
KSDV+S G++ E++T HG+ I Y VI Y P C
Sbjct: 194 IKSDVWSFGILLTEIVT------HGR-------IPYPGMTNPEVIQNLERGYRMVRPDNC 240
Query: 852 VEKFIKLALKCCQDETDARPSMSEVMRELE 881
E+ +L C ++ + RP+ + LE
Sbjct: 241 PEELYQLMRLCWKERPEDRPTFDYLRSVLE 270
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 124/270 (45%), Gaps = 28/270 (10%)
Query: 616 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD 675
++G G +G+V+ G T VAVK ++GS+ + FL E + +L H+ LV L
Sbjct: 20 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYAVVT 78
Query: 676 EEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRD 735
+E ++ E+M NG+L D L S L L +A + G+ ++ + HRD
Sbjct: 79 QE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRD 134
Query: 736 IKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLT 795
++A+NIL+ + K+ADFGL+RL + D E +K T PE T
Sbjct: 135 LRAANILVSDTLSCKIADFGLARL--IEDNEYTAREGAKFPIKWTA----PEAINYGTFT 188
Query: 796 DKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSY----PSEC 851
KSDV+S G++ E++T HG+ I Y VI Y P C
Sbjct: 189 IKSDVWSFGILLTEIVT------HGR-------IPYPGMTNPEVIQNLERGYRMVRPDNC 235
Query: 852 VEKFIKLALKCCQDETDARPSMSEVMRELE 881
E+ +L C ++ + RP+ + LE
Sbjct: 236 PEELYQLMRLCWKERPEDRPTFDYLRSVLE 265
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 124/270 (45%), Gaps = 28/270 (10%)
Query: 616 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD 675
++G G +G+V+ G T VAVK ++GS+ + FL E + +L H+ LV L
Sbjct: 26 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYAVVT 84
Query: 676 EEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRD 735
+E ++ E+M NG+L D L S L L +A + G+ ++ + HRD
Sbjct: 85 QE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRD 140
Query: 736 IKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLT 795
++A+NIL+ + K+ADFGL+RL + D E +K T PE T
Sbjct: 141 LRAANILVSDTLSCKIADFGLARL--IEDNEYTAREGAKFPIKWTA----PEAINYGTFT 194
Query: 796 DKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSY----PSEC 851
KSDV+S G++ E++T HG+ I Y VI Y P C
Sbjct: 195 IKSDVWSFGILLTEIVT------HGR-------IPYPGMTNPEVIQNLERGYRMVRPDNC 241
Query: 852 VEKFIKLALKCCQDETDARPSMSEVMRELE 881
E+ +L C ++ + RP+ + LE
Sbjct: 242 PEELYQLMRLCWKERPEDRPTFDYLRSVLE 271
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 143/321 (44%), Gaps = 37/321 (11%)
Query: 582 RRRHSSKTSIKIDGVRSF-----------TYGEMA--LATNNFNSSTQIGQGGYGKVYKG 628
+R H +K+ G+R+F T E A L N + +G G +G+V G
Sbjct: 5 KRLHFGNGHLKLPGLRTFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSG 64
Query: 629 ILP----DGTVVAVKRAQEGSLQGEK-EFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 683
L VA+K + G + ++ +FL E + + H N++ L G + M+V
Sbjct: 65 RLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIV 124
Query: 684 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILL 743
E+M NG+L D K + + G + G+ YL +D HRD+ A NIL+
Sbjct: 125 TEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILI 180
Query: 744 DHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTP-GYLDPEYFLTHKLTDKSDVYS 802
+ KV+DFGL+R+ +E A +T P + PE K T SDV+S
Sbjct: 181 NSNLVCKVSDFGLARV-----LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWS 235
Query: 803 LGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKC 862
G+V E++ S+G+ E++ ++ +V +G P +C +L L C
Sbjct: 236 YGIVLWEVM------SYGERPYWEMS---NQDVIKAVDEGYRLPPPMDCPAALYQLMLDC 286
Query: 863 CQDETDARPSMSEVMRELESI 883
Q + + RP +++ L+ +
Sbjct: 287 WQKDRNNRPKFEQIVSILDKL 307
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 97.4 bits (241), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 123/270 (45%), Gaps = 28/270 (10%)
Query: 616 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD 675
++G G +G+V+ G T VAVK ++GS+ + FL E + +L H+ LV L
Sbjct: 30 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYAVVT 88
Query: 676 EEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRD 735
+E ++ E+M NG+L D L S L L +A + G+ ++ HRD
Sbjct: 89 QE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRD 144
Query: 736 IKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLT 795
++A+NIL+ + K+ADFGL+RL + D E +K T PE T
Sbjct: 145 LRAANILVSDTLSCKIADFGLARL--IEDNEYTAREGAKFPIKWTA----PEAINYGTFT 198
Query: 796 DKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSY----PSEC 851
KSDV+S G++ E++T HG+ I Y VI Y P C
Sbjct: 199 IKSDVWSFGILLTEIVT------HGR-------IPYPGMTNPEVIQNLERGYRMVRPDNC 245
Query: 852 VEKFIKLALKCCQDETDARPSMSEVMRELE 881
E+ +L C ++ + RP+ + LE
Sbjct: 246 PEELYQLMRLCWKERPEDRPTFDYLRSVLE 275
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 142/330 (43%), Gaps = 60/330 (18%)
Query: 590 SIKIDGVRSFTYGEMALATNNFNSSTQIGQGGYGKVYKGIL------PDGTVVAVKRAQE 643
S+ +D + + N +G+G +GKV K T VAVK +E
Sbjct: 4 SLSVDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKE 63
Query: 644 GSLQGE-KEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKE 702
+ E ++ L+E L +++H +++ L G C ++G +L+ E+ G+LR L K
Sbjct: 64 NASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKV 123
Query: 703 PLGFAMR----------------------LSIALGSSRGILYLHTEADPPVFHRDIKASN 740
G+ +S A S+G+ YL A+ + HRD+ A N
Sbjct: 124 GPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARN 180
Query: 741 ILLDHKFTAKVADFGLSR-----LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLT 795
IL+ K++DFGLSR + V +G +P ++ E H T
Sbjct: 181 ILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVK----------WMAIESLFDHIYT 230
Query: 796 DKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVID-GNMGSYPSECVE 853
+SDV+S GV+ E++T G P +F+++ G+ P C E
Sbjct: 231 TQSDVWSFGVLLWEIVTLGGNPYP-----------GIPPERLFNLLKTGHRMERPDNCSE 279
Query: 854 KFIKLALKCCQDETDARPSMSEVMRELESI 883
+ +L L+C + E D RP +++ ++LE +
Sbjct: 280 EMYRLMLQCWKQEPDKRPVFADISKDLEKM 309
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 143/321 (44%), Gaps = 37/321 (11%)
Query: 582 RRRHSSKTSIKIDGVRSF-----------TYGEMA--LATNNFNSSTQIGQGGYGKVYKG 628
+R H +K+ G+R++ T E A L N + +G G +G+V G
Sbjct: 5 KRLHFGNGHLKLPGLRTYVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSG 64
Query: 629 ILP----DGTVVAVKRAQEGSLQGEK-EFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 683
L VA+K + G + ++ +FL E + + H N++ L G + M+V
Sbjct: 65 RLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIV 124
Query: 684 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILL 743
E+M NG+L D K + + G + G+ YL +D HRD+ A NIL+
Sbjct: 125 TEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILI 180
Query: 744 DHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTP-GYLDPEYFLTHKLTDKSDVYS 802
+ KV+DFGLSR+ +E A +T P + PE K T SDV+S
Sbjct: 181 NSNLVCKVSDFGLSRV-----LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWS 235
Query: 803 LGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKC 862
G+V E++ S+G+ E++ ++ +V +G P +C +L L C
Sbjct: 236 YGIVLWEVM------SYGERPYWEMS---NQDVIKAVDEGYRLPPPMDCPAALYQLMLDC 286
Query: 863 CQDETDARPSMSEVMRELESI 883
Q + + RP +++ L+ +
Sbjct: 287 WQKDRNNRPKFEQIVSILDKL 307
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 142/330 (43%), Gaps = 60/330 (18%)
Query: 590 SIKIDGVRSFTYGEMALATNNFNSSTQIGQGGYGKVYKGIL------PDGTVVAVKRAQE 643
S+ +D + + N +G+G +GKV K T VAVK +E
Sbjct: 4 SLSVDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKE 63
Query: 644 GSLQGE-KEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKE 702
+ E ++ L+E L +++H +++ L G C ++G +L+ E+ G+LR L K
Sbjct: 64 NASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKV 123
Query: 703 PLGFAMR----------------------LSIALGSSRGILYLHTEADPPVFHRDIKASN 740
G+ +S A S+G+ YL A+ + HRD+ A N
Sbjct: 124 GPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARN 180
Query: 741 ILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPG-----YLDPEYFLTHKLT 795
IL+ K++DFGLSR D + VK + G ++ E H T
Sbjct: 181 ILVAEGRKMKISDFGLSRDVYEED----------SYVKRSQGRIPVKWMAIESLFDHIYT 230
Query: 796 DKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVID-GNMGSYPSECVE 853
+SDV+S GV+ E++T G P +F+++ G+ P C E
Sbjct: 231 TQSDVWSFGVLLWEIVTLGGNPYP-----------GIPPERLFNLLKTGHRMERPDNCSE 279
Query: 854 KFIKLALKCCQDETDARPSMSEVMRELESI 883
+ +L L+C + E D RP +++ ++LE +
Sbjct: 280 EMYRLMLQCWKQEPDKRPVFADISKDLEKM 309
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 132/276 (47%), Gaps = 28/276 (10%)
Query: 616 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD 675
+IG G +G VYKG V + + Q + F E+ L + H N++ +GY
Sbjct: 31 RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 90
Query: 676 EEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMR--LSIALGSSRGILYLHTEADPPVFH 733
+ + +V ++ +L L A + F M+ + IA ++RG+ YLH ++ + H
Sbjct: 91 KP-QLAIVTQWCEGSSLYHHLHASETK---FEMKKLIDIARQTARGMDYLHAKS---IIH 143
Query: 734 RDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHK 793
RD+K++NI L T K+ DFGL+ + +H + G+ ++ PE +
Sbjct: 144 RDLKSNNIFLHEDNTVKIGDFGLA-----TEKSRWSGSHQFEQLSGSILWMAPEVI---R 195
Query: 794 LTD------KSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSY 847
+ D +SDVY+ G+V EL+TG P S+ N + + + + S+ ++
Sbjct: 196 MQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSL-----SPDLSKV 250
Query: 848 PSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883
S C ++ +L +C + + D RPS ++ E+E +
Sbjct: 251 RSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEEL 286
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 124/270 (45%), Gaps = 28/270 (10%)
Query: 616 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD 675
++G G +G+V+ G T VAVK ++GS+ + FL E + +L H+ LV L
Sbjct: 15 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYAVVT 73
Query: 676 EEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRD 735
+E ++ E+M NG+L D L S L L +A + G+ ++ + HRD
Sbjct: 74 QE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRD 129
Query: 736 IKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLT 795
++A+NIL+ + K+ADFGL+RL + D E +K T PE T
Sbjct: 130 LRAANILVSDTLSCKIADFGLARL--IEDNEYTAREGAKFPIKWTA----PEAINYGTFT 183
Query: 796 DKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSY----PSEC 851
KSDV+S G++ E++T HG+ I Y VI Y P C
Sbjct: 184 IKSDVWSFGILLTEIVT------HGR-------IPYPGMTNPEVIQNLERGYRMVRPDNC 230
Query: 852 VEKFIKLALKCCQDETDARPSMSEVMRELE 881
E+ +L C ++ + RP+ + LE
Sbjct: 231 PEELYQLMRLCWKERPEDRPTFDYLRSVLE 260
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 142/330 (43%), Gaps = 60/330 (18%)
Query: 590 SIKIDGVRSFTYGEMALATNNFNSSTQIGQGGYGKVYKGIL------PDGTVVAVKRAQE 643
S+ +D + + N +G+G +GKV K T VAVK +E
Sbjct: 4 SLSVDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKE 63
Query: 644 GSLQGE-KEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKE 702
+ E ++ L+E L +++H +++ L G C ++G +L+ E+ G+LR L K
Sbjct: 64 NASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKV 123
Query: 703 PLGFAMR----------------------LSIALGSSRGILYLHTEADPPVFHRDIKASN 740
G+ +S A S+G+ YL A+ + HRD+ A N
Sbjct: 124 GPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMSLVHRDLAARN 180
Query: 741 ILLDHKFTAKVADFGLSR-----LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLT 795
IL+ K++DFGLSR + V +G +P ++ E H T
Sbjct: 181 ILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVK----------WMAIESLFDHIYT 230
Query: 796 DKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVID-GNMGSYPSECVE 853
+SDV+S GV+ E++T G P +F+++ G+ P C E
Sbjct: 231 TQSDVWSFGVLLWEIVTLGGNPYP-----------GIPPERLFNLLKTGHRMERPDNCSE 279
Query: 854 KFIKLALKCCQDETDARPSMSEVMRELESI 883
+ +L L+C + E D RP +++ ++LE +
Sbjct: 280 EMYRLMLQCWKQEPDKRPVFADISKDLEKM 309
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 143/321 (44%), Gaps = 37/321 (11%)
Query: 582 RRRHSSKTSIKIDGVRSF-----------TYGEMA--LATNNFNSSTQIGQGGYGKVYKG 628
+R H +K+ G+R++ T E A L N + +G G +G+V G
Sbjct: 5 KRLHFGNGHLKLPGLRTYVDPHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSG 64
Query: 629 ILP----DGTVVAVKRAQEGSLQGEK-EFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 683
L VA+K + G + ++ +FL E + + H N++ L G + M+V
Sbjct: 65 RLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIV 124
Query: 684 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILL 743
E+M NG+L D K + + G + G+ YL +D HRD+ A NIL+
Sbjct: 125 TEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILI 180
Query: 744 DHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTP-GYLDPEYFLTHKLTDKSDVYS 802
+ KV+DFGLSR+ +E A +T P + PE K T SDV+S
Sbjct: 181 NSNLVCKVSDFGLSRV-----LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWS 235
Query: 803 LGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKC 862
G+V E++ S+G+ E++ ++ +V +G P +C +L L C
Sbjct: 236 YGIVLWEVM------SYGERPYWEMS---NQDVIKAVDEGYRLPPPMDCPAALYQLMLDC 286
Query: 863 CQDETDARPSMSEVMRELESI 883
Q + + RP +++ L+ +
Sbjct: 287 WQKDRNNRPKFEQIVSILDKL 307
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 97.1 bits (240), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 143/321 (44%), Gaps = 37/321 (11%)
Query: 582 RRRHSSKTSIKIDGVRSF-----------TYGEMA--LATNNFNSSTQIGQGGYGKVYKG 628
+R H +K+ G+R++ T E A L N + +G G +G+V G
Sbjct: 3 KRLHFGNGHLKLPGLRTYVDPHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSG 62
Query: 629 ILP----DGTVVAVKRAQEGSLQGEK-EFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 683
L VA+K + G + ++ +FL E + + H N++ L G + M+V
Sbjct: 63 RLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIV 122
Query: 684 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILL 743
E+M NG+L D K + + G + G+ YL +D HRD+ A NIL+
Sbjct: 123 TEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILI 178
Query: 744 DHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTP-GYLDPEYFLTHKLTDKSDVYS 802
+ KV+DFGLSR+ +E A +T P + PE K T SDV+S
Sbjct: 179 NSNLVCKVSDFGLSRV-----LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWS 233
Query: 803 LGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKC 862
G+V E++ S+G+ E++ ++ +V +G P +C +L L C
Sbjct: 234 YGIVLWEVM------SYGERPYWEMS---NQDVIKAVDEGYRLPPPMDCPAALYQLMLDC 284
Query: 863 CQDETDARPSMSEVMRELESI 883
Q + + RP +++ L+ +
Sbjct: 285 WQKDRNNRPKFEQIVSILDKL 305
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 97.1 bits (240), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 142/321 (44%), Gaps = 37/321 (11%)
Query: 582 RRRHSSKTSIKIDGVRSF-----------TYGEMA--LATNNFNSSTQIGQGGYGKVYKG 628
+R H +K+ G+R+F T E A L N + +G G +G+V G
Sbjct: 5 KRLHFGNGHLKLPGLRTFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSG 64
Query: 629 ILP----DGTVVAVKRAQEGSLQGEK-EFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 683
L VA+K + G + ++ +FL E + + H N++ L G + M+V
Sbjct: 65 RLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIV 124
Query: 684 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILL 743
E M NG+L D K + + G + G+ YL +D HRD+ A NIL+
Sbjct: 125 TEXMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGAVHRDLAARNILI 180
Query: 744 DHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTP-GYLDPEYFLTHKLTDKSDVYS 802
+ KV+DFGLSR+ +E A +T P + PE K T SDV+S
Sbjct: 181 NSNLVCKVSDFGLSRV-----LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWS 235
Query: 803 LGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKC 862
G+V E++ S+G+ E++ ++ +V +G P +C +L L C
Sbjct: 236 YGIVLWEVM------SYGERPYWEMS---NQDVIKAVDEGYRLPPPMDCPAALYQLMLDC 286
Query: 863 CQDETDARPSMSEVMRELESI 883
Q + + RP +++ L+ +
Sbjct: 287 WQKDRNNRPKFEQIVSILDKL 307
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 142/321 (44%), Gaps = 37/321 (11%)
Query: 582 RRRHSSKTSIKIDGVRSF-----------TYGEMA--LATNNFNSSTQIGQGGYGKVYKG 628
+R H +K+ G+R+F T E A L N + +G G +G+V G
Sbjct: 5 KRLHFGNGHLKLPGLRTFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSG 64
Query: 629 ILP----DGTVVAVKRAQEGSLQGEK-EFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 683
L VA+K + G + ++ +FL E + + H N++ L G + M+V
Sbjct: 65 RLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIV 124
Query: 684 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILL 743
E+M NG+L D K + + G + G+ YL +D HRD+ A NIL+
Sbjct: 125 TEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILI 180
Query: 744 DHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTP-GYLDPEYFLTHKLTDKSDVYS 802
+ KV+DFGL R+ +E A +T P + PE K T SDV+S
Sbjct: 181 NSNLVCKVSDFGLGRV-----LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWS 235
Query: 803 LGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKC 862
G+V E++ S+G+ E++ ++ +V +G P +C +L L C
Sbjct: 236 YGIVLWEVM------SYGERPYWEMS---NQDVIKAVDEGYRLPPPMDCPAALYQLMLDC 286
Query: 863 CQDETDARPSMSEVMRELESI 883
Q + + RP +++ L+ +
Sbjct: 287 WQKDRNNRPKFEQIVSILDKL 307
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 96.7 bits (239), Expect = 6e-20, Method: Composition-based stats.
Identities = 79/273 (28%), Positives = 123/273 (45%), Gaps = 28/273 (10%)
Query: 616 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD 675
++G G G+V+ G T VAVK ++GS+ + FL E + +L H+ LV L
Sbjct: 20 RLGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYAVVT 78
Query: 676 EEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRD 735
+E ++ E+M NG+L D L S L L +A + G+ ++ HRD
Sbjct: 79 QE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRD 134
Query: 736 IKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLT 795
++A+NIL+ + K+ADFGL+RL + D E +K T PE T
Sbjct: 135 LRAANILVSDTLSCKIADFGLARL--IEDAEXTAREGAKFPIKWTA----PEAINYGTFT 188
Query: 796 DKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSY----PSEC 851
KSDV+S G++ E++T HG+ I Y VI Y P C
Sbjct: 189 IKSDVWSFGILLTEIVT------HGR-------IPYPGMTNPEVIQNLERGYRMVRPDNC 235
Query: 852 VEKFIKLALKCCQDETDARPSMSEVMRELESIW 884
E+ +L C ++ + RP+ + LE +
Sbjct: 236 PEELYQLMRLCWKERPEDRPTFDYLRSVLEDFF 268
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 96.7 bits (239), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 133/280 (47%), Gaps = 31/280 (11%)
Query: 617 IGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE 676
+G+G +G V K VA+K+ + S + K F+ E++ LSR++H N+V L G C
Sbjct: 17 VGRGAFGVVCKAKW-RAKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGAC-- 71
Query: 677 EGEQMLVYEFMSNGTLRDQLSAKSKEPLGF---AMRLSIALGSSRGILYLHTEADPPVFH 733
LV E+ G+L + L EPL + A +S L S+G+ YLH+ + H
Sbjct: 72 LNPVCLVMEYAEGGSLYNVLHGA--EPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIH 129
Query: 734 RDIKASNILLDHKFTA-KVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH 792
RD+K N+LL T K+ DFG + DI+ H+ T KG+ ++ PE F
Sbjct: 130 RDLKPPNLLLVAGGTVLKICDFGTAC-----DIQ----THM-TNNKGSAAWMAPEVFEGS 179
Query: 793 KLTDKSDVYSLGVVFLELLTGMQPISH-GKNIVREVNIAYQSSMMFSVIDGNMGSYPSEC 851
++K DV+S G++ E++T +P G R +M++V +G
Sbjct: 180 NYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFR---------IMWAVHNGTRPPLIKNL 230
Query: 852 VEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESD 891
+ L +C + RPSM E+++ + + P +D
Sbjct: 231 PKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPGAD 270
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 96.3 bits (238), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 133/280 (47%), Gaps = 31/280 (11%)
Query: 617 IGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE 676
+G+G +G V K VA+K+ + S + K F+ E++ LSR++H N+V L G C
Sbjct: 16 VGRGAFGVVCKAKW-RAKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGAC-- 70
Query: 677 EGEQMLVYEFMSNGTLRDQLSAKSKEPLGF---AMRLSIALGSSRGILYLHTEADPPVFH 733
LV E+ G+L + L EPL + A +S L S+G+ YLH+ + H
Sbjct: 71 LNPVCLVMEYAEGGSLYNVLHGA--EPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIH 128
Query: 734 RDIKASNILLDHKFTA-KVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH 792
RD+K N+LL T K+ DFG + DI+ H+ T KG+ ++ PE F
Sbjct: 129 RDLKPPNLLLVAGGTVLKICDFGTAC-----DIQ----THM-TNNKGSAAWMAPEVFEGS 178
Query: 793 KLTDKSDVYSLGVVFLELLTGMQPISH-GKNIVREVNIAYQSSMMFSVIDGNMGSYPSEC 851
++K DV+S G++ E++T +P G R +M++V +G
Sbjct: 179 NYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFR---------IMWAVHNGTRPPLIKNL 229
Query: 852 VEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESD 891
+ L +C + RPSM E+++ + + P +D
Sbjct: 230 PKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPGAD 269
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 96.3 bits (238), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 131/276 (47%), Gaps = 28/276 (10%)
Query: 616 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD 675
+IG G +G VYKG V + + Q + F E+ L + H N++ +GY
Sbjct: 31 RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 90
Query: 676 EEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMR--LSIALGSSRGILYLHTEADPPVFH 733
+ +V ++ +L L A + F M+ + IA ++RG+ YLH ++ + H
Sbjct: 91 AP-QLAIVTQWCEGSSLYHHLHASETK---FEMKKLIDIARQTARGMDYLHAKS---IIH 143
Query: 734 RDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHK 793
RD+K++NI L T K+ DFGL+ + +H + G+ ++ PE +
Sbjct: 144 RDLKSNNIFLHEDNTVKIGDFGLA-----TEKSRWSGSHQFEQLSGSILWMAPEVI---R 195
Query: 794 LTD------KSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSY 847
+ D +SDVY+ G+V EL+TG P S+ N + + + + S+ ++
Sbjct: 196 MQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSL-----SPDLSKV 250
Query: 848 PSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883
S C ++ +L +C + + D RPS ++ E+E +
Sbjct: 251 RSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEEL 286
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 127/273 (46%), Gaps = 24/273 (8%)
Query: 617 IGQGGYGKVYKGILP----DGTVVAVKRAQEGSLQGEK-EFLTEIQFLSRLHHRNLVSLV 671
IG G +G+V G L VA+K + G + ++ +FL E + + H N++ L
Sbjct: 30 IGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHLE 89
Query: 672 GYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPV 731
G + M+V E+M NG+L D K+ + + G S G+ YL +D
Sbjct: 90 GVVTKSKPVMIVTEYMENGSL-DTFLKKNDGQFTVIQLVGMLRGISAGMKYL---SDMGY 145
Query: 732 FHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTP-GYLDPEYFL 790
HRD+ A NIL++ KV+DFGLSR+ +E A +T P + PE
Sbjct: 146 VHRDLAARNILINSNLVCKVSDFGLSRV-----LEDDPEAAYTTRGGKIPIRWTAPEAIA 200
Query: 791 THKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSE 850
K T SDV+S G+V E+ +S+G+ E+ ++ +V +G P +
Sbjct: 201 FRKFTSASDVWSYGIVMWEV------VSYGERPYWEMT---NQDVIKAVEEGYRLPSPMD 251
Query: 851 CVEKFIKLALKCCQDETDARPSMSEVMRELESI 883
C +L L C Q E ++RP E++ L+ +
Sbjct: 252 CPAALYQLMLDCWQKERNSRPKFDEIVNMLDKL 284
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 136/305 (44%), Gaps = 48/305 (15%)
Query: 609 NNFNSSTQIGQGGYGKVYK----GILP--DGTVVAVKR-AQEGSLQGEKEFLTEIQFLSR 661
NN IG+G +G+V++ G+LP T+VAVK +E S + +F E ++
Sbjct: 47 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAE 106
Query: 662 LHHRNLVSLVGYCDEEGEQMLVYEFMSNGTL----------------------RDQLSAK 699
+ N+V L+G C L++E+M+ G L R ++S+
Sbjct: 107 FDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSP 166
Query: 700 SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRL 759
PL A +L IA + G+ YL ++ HRD+ N L+ K+ADFGLSR
Sbjct: 167 GPPPLSCAEQLCIARQVAAGMAYL---SERKFVHRDLATRNCLVGENMVVKIADFGLSRN 223
Query: 760 APVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPIS 818
D + + ++ P PE ++ T +SDV++ GVV E+ + G+QP
Sbjct: 224 IYSADYYK-ADGNDAIPIRWMP----PESIFYNRYTTESDVWAYGVVLWEIFSYGLQPY- 277
Query: 819 HGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMR 878
+A++ +++ V DGN+ + P C + L C RPS + R
Sbjct: 278 --------YGMAHE-EVIYYVRDGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHR 328
Query: 879 ELESI 883
L+ +
Sbjct: 329 ILQRM 333
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 134/290 (46%), Gaps = 31/290 (10%)
Query: 616 QIGQGGYGKV----YKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSL 670
Q+G+G +G V Y + + G VVAVK+ Q + + ++F EI+ L L H N+V
Sbjct: 15 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 74
Query: 671 VGYCDEEGEQ--MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEAD 728
G C G + L+ E++ G+LRD L K KE + L +G+ YL T+
Sbjct: 75 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLGTKR- 132
Query: 729 PPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPG-----Y 783
HRD+ NIL++++ K+ DFGL++ ++P PG +
Sbjct: 133 --YIHRDLATRNILVENENRVKIGDFGLTK---------VLPQDKEXXKVKEPGESPIFW 181
Query: 784 LDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQP-ISHGKNIVREVNIAYQSSMM-FSVID 841
PE K + SDV+S GVV EL T ++ S +R + Q M+ F +I+
Sbjct: 182 YAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIE 241
Query: 842 --GNMGSYPSE--CVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMM 887
N G P C ++ + +C + + RPS ++ ++ I + M
Sbjct: 242 LLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQM 291
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 134/290 (46%), Gaps = 31/290 (10%)
Query: 616 QIGQGGYGKV----YKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSL 670
Q+G+G +G V Y + + G VVAVK+ Q + + ++F EI+ L L H N+V
Sbjct: 48 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 107
Query: 671 VGYCDEEGEQ--MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEAD 728
G C G + L+ E++ G+LRD L K KE + L +G+ YL T+
Sbjct: 108 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLGTKR- 165
Query: 729 PPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPG-----Y 783
HRD+ NIL++++ K+ DFGL++ ++P PG +
Sbjct: 166 --YIHRDLATRNILVENENRVKIGDFGLTK---------VLPQDKEXXKVKEPGESPIFW 214
Query: 784 LDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQP-ISHGKNIVREVNIAYQSSMM-FSVID 841
PE K + SDV+S GVV EL T ++ S +R + Q M+ F +I+
Sbjct: 215 YAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIE 274
Query: 842 --GNMGSYPSE--CVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMM 887
N G P C ++ + +C + + RPS ++ ++ I + M
Sbjct: 275 LLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQM 324
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 124/270 (45%), Gaps = 28/270 (10%)
Query: 616 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD 675
++G G +G+V+ G T VAVK ++GS+ + FL E + +L H+ LV L
Sbjct: 16 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYAVVT 74
Query: 676 EEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRD 735
+E ++ E+M NG+L D L S L L +A + G+ ++ + HR+
Sbjct: 75 QE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRN 130
Query: 736 IKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLT 795
++A+NIL+ + K+ADFGL+RL + D E +K T PE T
Sbjct: 131 LRAANILVSDTLSCKIADFGLARL--IEDNEYTAREGAKFPIKWTA----PEAINYGTFT 184
Query: 796 DKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSY----PSEC 851
KSDV+S G++ E++T HG+ I Y VI Y P C
Sbjct: 185 IKSDVWSFGILLTEIVT------HGR-------IPYPGMTNPEVIQNLERGYRMVRPDNC 231
Query: 852 VEKFIKLALKCCQDETDARPSMSEVMRELE 881
E+ +L C ++ + RP+ + LE
Sbjct: 232 PEELYQLMRLCWKERPEDRPTFDYLRSVLE 261
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 142/321 (44%), Gaps = 37/321 (11%)
Query: 582 RRRHSSKTSIKIDGVRSF-----------TYGEMA--LATNNFNSSTQIGQGGYGKVYKG 628
+R H +K+ G+R++ T E A L N + +G G +G+V G
Sbjct: 5 KRLHFGNGHLKLPGLRTYVDPHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSG 64
Query: 629 ILP----DGTVVAVKRAQEGSLQGEK-EFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 683
L VA+K + G + ++ +FL E + + H N++ L G + M+V
Sbjct: 65 RLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIV 124
Query: 684 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILL 743
E M NG+L D K + + G + G+ YL +D HRD+ A NIL+
Sbjct: 125 TEXMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILI 180
Query: 744 DHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTP-GYLDPEYFLTHKLTDKSDVYS 802
+ KV+DFGLSR+ +E A +T P + PE K T SDV+S
Sbjct: 181 NSNLVCKVSDFGLSRV-----LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWS 235
Query: 803 LGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKC 862
G+V E++ S+G+ E++ ++ +V +G P +C +L L C
Sbjct: 236 YGIVLWEVM------SYGERPYWEMS---NQDVIKAVDEGYRLPPPMDCPAALYQLMLDC 286
Query: 863 CQDETDARPSMSEVMRELESI 883
Q + + RP +++ L+ +
Sbjct: 287 WQKDRNNRPKFEQIVSILDKL 307
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 134/290 (46%), Gaps = 31/290 (10%)
Query: 616 QIGQGGYGKV----YKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSL 670
Q+G+G +G V Y + + G VVAVK+ Q + + ++F EI+ L L H N+V
Sbjct: 20 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 671 VGYCDEEGEQ--MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEAD 728
G C G + L+ E++ G+LRD L K KE + L +G+ YL T+
Sbjct: 80 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLGTKR- 137
Query: 729 PPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPG-----Y 783
HRD+ NIL++++ K+ DFGL++ ++P PG +
Sbjct: 138 --YIHRDLATRNILVENENRVKIGDFGLTK---------VLPQDKEXXKVKEPGESPIFW 186
Query: 784 LDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQP-ISHGKNIVREVNIAYQSSMM-FSVID 841
PE K + SDV+S GVV EL T ++ S +R + Q M+ F +I+
Sbjct: 187 YAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIE 246
Query: 842 --GNMGSYPSE--CVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMM 887
N G P C ++ + +C + + RPS ++ ++ I + M
Sbjct: 247 LLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 296
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 134/290 (46%), Gaps = 31/290 (10%)
Query: 616 QIGQGGYGKV----YKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSL 670
Q+G+G +G V Y + + G VVAVK+ Q + + ++F EI+ L L H N+V
Sbjct: 16 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 75
Query: 671 VGYCDEEGEQ--MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEAD 728
G C G + L+ E++ G+LRD L K KE + L +G+ YL T+
Sbjct: 76 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLGTKR- 133
Query: 729 PPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPG-----Y 783
HRD+ NIL++++ K+ DFGL++ ++P PG +
Sbjct: 134 --YIHRDLATRNILVENENRVKIGDFGLTK---------VLPQDKEXXKVKEPGESPIFW 182
Query: 784 LDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQP-ISHGKNIVREVNIAYQSSMM-FSVID 841
PE K + SDV+S GVV EL T ++ S +R + Q M+ F +I+
Sbjct: 183 YAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIE 242
Query: 842 --GNMGSYPSE--CVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMM 887
N G P C ++ + +C + + RPS ++ ++ I + M
Sbjct: 243 LLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 292
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 134/290 (46%), Gaps = 31/290 (10%)
Query: 616 QIGQGGYGKV----YKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSL 670
Q+G+G +G V Y + + G VVAVK+ Q + + ++F EI+ L L H N+V
Sbjct: 17 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 671 VGYCDEEGEQ--MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEAD 728
G C G + L+ E++ G+LRD L K KE + L +G+ YL T+
Sbjct: 77 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLGTKR- 134
Query: 729 PPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPG-----Y 783
HRD+ NIL++++ K+ DFGL++ ++P PG +
Sbjct: 135 --YIHRDLATRNILVENENRVKIGDFGLTK---------VLPQDKEXXKVKEPGESPIFW 183
Query: 784 LDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQP-ISHGKNIVREVNIAYQSSMM-FSVID 841
PE K + SDV+S GVV EL T ++ S +R + Q M+ F +I+
Sbjct: 184 YAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIE 243
Query: 842 --GNMGSYPSE--CVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMM 887
N G P C ++ + +C + + RPS ++ ++ I + M
Sbjct: 244 LLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 293
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 134/290 (46%), Gaps = 31/290 (10%)
Query: 616 QIGQGGYGKV----YKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSL 670
Q+G+G +G V Y + + G VVAVK+ Q + + ++F EI+ L L H N+V
Sbjct: 21 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 80
Query: 671 VGYCDEEGEQ--MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEAD 728
G C G + L+ E++ G+LRD L K KE + L +G+ YL T+
Sbjct: 81 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLGTKR- 138
Query: 729 PPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPG-----Y 783
HRD+ NIL++++ K+ DFGL++ ++P PG +
Sbjct: 139 --YIHRDLATRNILVENENRVKIGDFGLTK---------VLPQDKEXXKVKEPGESPIFW 187
Query: 784 LDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQP-ISHGKNIVREVNIAYQSSMM-FSVID 841
PE K + SDV+S GVV EL T ++ S +R + Q M+ F +I+
Sbjct: 188 YAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIE 247
Query: 842 --GNMGSYPSE--CVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMM 887
N G P C ++ + +C + + RPS ++ ++ I + M
Sbjct: 248 LLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 297
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 134/290 (46%), Gaps = 31/290 (10%)
Query: 616 QIGQGGYGKV----YKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSL 670
Q+G+G +G V Y + + G VVAVK+ Q + + ++F EI+ L L H N+V
Sbjct: 22 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 81
Query: 671 VGYCDEEGEQ--MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEAD 728
G C G + L+ E++ G+LRD L K KE + L +G+ YL T+
Sbjct: 82 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLGTKR- 139
Query: 729 PPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPG-----Y 783
HRD+ NIL++++ K+ DFGL++ ++P PG +
Sbjct: 140 --YIHRDLATRNILVENENRVKIGDFGLTK---------VLPQDKEXXKVKEPGESPIFW 188
Query: 784 LDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQP-ISHGKNIVREVNIAYQSSMM-FSVID 841
PE K + SDV+S GVV EL T ++ S +R + Q M+ F +I+
Sbjct: 189 YAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIE 248
Query: 842 --GNMGSYPSE--CVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMM 887
N G P C ++ + +C + + RPS ++ ++ I + M
Sbjct: 249 LLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 298
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 134/290 (46%), Gaps = 31/290 (10%)
Query: 616 QIGQGGYGKV----YKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSL 670
Q+G+G +G V Y + + G VVAVK+ Q + + ++F EI+ L L H N+V
Sbjct: 24 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 83
Query: 671 VGYCDEEGEQ--MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEAD 728
G C G + L+ E++ G+LRD L K KE + L +G+ YL T+
Sbjct: 84 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLGTKR- 141
Query: 729 PPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPG-----Y 783
HRD+ NIL++++ K+ DFGL++ ++P PG +
Sbjct: 142 --YIHRDLATRNILVENENRVKIGDFGLTK---------VLPQDKEXXKVKEPGESPIFW 190
Query: 784 LDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQP-ISHGKNIVREVNIAYQSSMM-FSVID 841
PE K + SDV+S GVV EL T ++ S +R + Q M+ F +I+
Sbjct: 191 YAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIE 250
Query: 842 --GNMGSYPSE--CVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMM 887
N G P C ++ + +C + + RPS ++ ++ I + M
Sbjct: 251 LLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 300
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 134/290 (46%), Gaps = 31/290 (10%)
Query: 616 QIGQGGYGKV----YKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSL 670
Q+G+G +G V Y + + G VVAVK+ Q + + ++F EI+ L L H N+V
Sbjct: 17 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 671 VGYCDEEGEQ--MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEAD 728
G C G + L+ E++ G+LRD L K KE + L +G+ YL T+
Sbjct: 77 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLGTKR- 134
Query: 729 PPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPG-----Y 783
HRD+ NIL++++ K+ DFGL++ ++P PG +
Sbjct: 135 --YIHRDLATRNILVENENRVKIGDFGLTK---------VLPQDKEXXKVKEPGESPIFW 183
Query: 784 LDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQP-ISHGKNIVREVNIAYQSSMM-FSVID 841
PE K + SDV+S GVV EL T ++ S +R + Q M+ F +I+
Sbjct: 184 YAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIE 243
Query: 842 --GNMGSYPSE--CVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMM 887
N G P C ++ + +C + + RPS ++ ++ I + M
Sbjct: 244 LLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 293
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 134/290 (46%), Gaps = 31/290 (10%)
Query: 616 QIGQGGYGKV----YKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSL 670
Q+G+G +G V Y + + G VVAVK+ Q + + ++F EI+ L L H N+V
Sbjct: 17 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 671 VGYCDEEGEQ--MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEAD 728
G C G + L+ E++ G+LRD L K KE + L +G+ YL T+
Sbjct: 77 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLGTKR- 134
Query: 729 PPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPG-----Y 783
HRD+ NIL++++ K+ DFGL++ ++P PG +
Sbjct: 135 --YIHRDLATRNILVENENRVKIGDFGLTK---------VLPQDKEFFKVKEPGESPIFW 183
Query: 784 LDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQP-ISHGKNIVREVNIAYQSSMM-FSVID 841
PE K + SDV+S GVV EL T ++ S +R + Q M+ F +I+
Sbjct: 184 YAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIE 243
Query: 842 --GNMGSYPSE--CVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMM 887
N G P C ++ + +C + + RPS ++ ++ I + M
Sbjct: 244 LLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 293
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 134/291 (46%), Gaps = 24/291 (8%)
Query: 597 RSFTYGEMALATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEK-EFLT 654
R+ + L + QIG+G +G+V+ G L D T+VAVK +E K +FL
Sbjct: 102 RAVPKDKWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQ 161
Query: 655 EIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIAL 714
E + L + H N+V L+G C ++ +V E + G L + L L +
Sbjct: 162 EARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGAR-LRVKTLLQMVG 220
Query: 715 GSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVS 774
++ G+ YL ++ HRD+ A N L+ K K++DFG+SR + +G+ A S
Sbjct: 221 DAAAGMEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSR----EEADGVXAA--S 271
Query: 775 TVVKGTP-GYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQ 832
++ P + PE + + +SDV+S G++ E + G P N++ Q
Sbjct: 272 GGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYP---------NLSNQ 322
Query: 833 SSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883
+ F V G P C + +L +C E RPS S + +EL+SI
Sbjct: 323 QTREF-VEKGGRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSI 372
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 134/291 (46%), Gaps = 24/291 (8%)
Query: 597 RSFTYGEMALATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEK-EFLT 654
R+ + L + QIG+G +G+V+ G L D T+VAVK +E K +FL
Sbjct: 102 RAVPKDKWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQ 161
Query: 655 EIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIAL 714
E + L + H N+V L+G C ++ +V E + G L + L L +
Sbjct: 162 EARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGAR-LRVKTLLQMVG 220
Query: 715 GSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVS 774
++ G+ YL ++ HRD+ A N L+ K K++DFG+SR + +G+ A S
Sbjct: 221 DAAAGMEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSR----EEADGVYAA--S 271
Query: 775 TVVKGTP-GYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQ 832
++ P + PE + + +SDV+S G++ E + G P N++ Q
Sbjct: 272 GGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYP---------NLSNQ 322
Query: 833 SSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883
+ F V G P C + +L +C E RPS S + +EL+SI
Sbjct: 323 QTREF-VEKGGRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSI 372
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 134/290 (46%), Gaps = 31/290 (10%)
Query: 616 QIGQGGYGKV----YKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSL 670
Q+G+G +G V Y + + G VVAVK+ Q + + ++F EI+ L L H N+V
Sbjct: 35 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 94
Query: 671 VGYCDEEGEQ--MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEAD 728
G C G + L+ E++ G+LRD L K KE + L +G+ YL T+
Sbjct: 95 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLGTKR- 152
Query: 729 PPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPG-----Y 783
HRD+ NIL++++ K+ DFGL++ ++P PG +
Sbjct: 153 --YIHRDLATRNILVENENRVKIGDFGLTK---------VLPQDKEXXKVKEPGESPIFW 201
Query: 784 LDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQP-ISHGKNIVREVNIAYQSSMM-FSVID 841
PE K + SDV+S GVV EL T ++ S +R + Q M+ F +I+
Sbjct: 202 YAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIE 261
Query: 842 --GNMGSYPSE--CVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMM 887
N G P C ++ + +C + + RPS ++ ++ I + M
Sbjct: 262 LLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 311
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 134/290 (46%), Gaps = 31/290 (10%)
Query: 616 QIGQGGYGKV----YKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSL 670
Q+G+G +G V Y + + G VVAVK+ Q + + ++F EI+ L L H N+V
Sbjct: 23 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 82
Query: 671 VGYCDEEGEQ--MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEAD 728
G C G + L+ E++ G+LRD L K KE + L +G+ YL T+
Sbjct: 83 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLGTKR- 140
Query: 729 PPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPG-----Y 783
HRD+ NIL++++ K+ DFGL++ ++P PG +
Sbjct: 141 --YIHRDLATRNILVENENRVKIGDFGLTK---------VLPQDKEXXKVKEPGESPIFW 189
Query: 784 LDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQP-ISHGKNIVREVNIAYQSSMM-FSVID 841
PE K + SDV+S GVV EL T ++ S +R + Q M+ F +I+
Sbjct: 190 YAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIE 249
Query: 842 --GNMGSYPSE--CVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMM 887
N G P C ++ + +C + + RPS ++ ++ I + M
Sbjct: 250 LLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 299
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 134/290 (46%), Gaps = 31/290 (10%)
Query: 616 QIGQGGYGKV----YKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSL 670
Q+G+G +G V Y + + G VVAVK+ Q + + ++F EI+ L L H N+V
Sbjct: 20 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 671 VGYCDEEGEQ--MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEAD 728
G C G + L+ EF+ G+LR+ L K KE + L +G+ YL T+
Sbjct: 80 KGVCYSAGRRNLKLIMEFLPYGSLREYLQ-KHKERIDHIKLLQYTSQICKGMEYLGTKR- 137
Query: 729 PPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPG-----Y 783
HRD+ NIL++++ K+ DFGL++ ++P PG +
Sbjct: 138 --YIHRDLATRNILVENENRVKIGDFGLTK---------VLPQDKEXXKVKEPGESPIFW 186
Query: 784 LDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQP-ISHGKNIVREVNIAYQSSMM-FSVID 841
PE K + SDV+S GVV EL T ++ S +R + Q M+ F +I+
Sbjct: 187 YAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIE 246
Query: 842 --GNMGSYPSE--CVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMM 887
N G P C ++ + +C + + RPS ++ ++ I + M
Sbjct: 247 LLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 296
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 141/315 (44%), Gaps = 35/315 (11%)
Query: 586 SSKTSIKIDGVRSFTYGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGS 645
K I+ G R +Y + + ST+IG G +G VYKG V + + + +
Sbjct: 14 QEKNKIRPRGQRDSSY-YWEIEASEVMLSTRIGSGSFGTVYKGKWHGDVAVKILKVVDPT 72
Query: 646 LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLG 705
+ + F E+ L + H N++ +GY ++ +V ++ +L L + +
Sbjct: 73 PEQFQAFRNEVAVLRKTRHVNILLFMGYMTKDN-LAIVTQWCEGSSLYKHLHVQETKFQM 131
Query: 706 FAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGL----SRLAP 761
F + + IA +++G+ YLH + + HRD+K++NI L T K+ DFGL SR +
Sbjct: 132 FQL-IDIARQTAQGMDYLHAKN---IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSG 187
Query: 762 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHK---LTDKSDVYSLGVVFLELLTGMQPIS 818
+E P G+ ++ PE + +SDVYS G+V EL+TG P S
Sbjct: 188 SQQVEQ--PT-------GSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYS 238
Query: 819 HGKNIVREVNIAYQSSMMFSVIDG----NMGSYPSECVEKFIKLALKCCQDETDARPSMS 874
H N + ++F V G ++ C + +L C + + RP
Sbjct: 239 HINN---------RDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFP 289
Query: 875 EVMRELESIWNMMPE 889
+++ +E + + +P+
Sbjct: 290 QILSSIELLQHSLPK 304
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 134/290 (46%), Gaps = 31/290 (10%)
Query: 616 QIGQGGYGKV----YKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSL 670
Q+G+G +G V Y + + G VVAVK+ Q + + ++F EI+ L L H N+V
Sbjct: 35 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 94
Query: 671 VGYCDEEGEQ--MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEAD 728
G C G + L+ E++ G+LRD L K KE + L +G+ YL T+
Sbjct: 95 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLGTKR- 152
Query: 729 PPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPG-----Y 783
HRD+ NIL++++ K+ DFGL++ ++P PG +
Sbjct: 153 --YIHRDLATRNILVENENRVKIGDFGLTK---------VLPQDKEXXKVKEPGESPIFW 201
Query: 784 LDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQP-ISHGKNIVREVNIAYQSSMM-FSVID 841
PE K + SDV+S GVV EL T ++ S +R + Q M+ F +I+
Sbjct: 202 YAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIE 261
Query: 842 --GNMGSYPSE--CVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMM 887
N G P C ++ + +C + + RPS ++ ++ I + M
Sbjct: 262 LLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 311
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 129/284 (45%), Gaps = 24/284 (8%)
Query: 606 LATNNFNSSTQIGQGGYGKVYKGILP----DGTVVAVKRAQEGSLQGEK-EFLTEIQFLS 660
L N + +G G +G+V G L VA+K + G + ++ +FL E +
Sbjct: 13 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 72
Query: 661 RLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGI 720
+ H N++ L G + M+V E+M NG+L D K + + G + G+
Sbjct: 73 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGM 131
Query: 721 LYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGT 780
YL +D HRD+ A NIL++ KV+DFGLSR+ +E A +T
Sbjct: 132 KYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRV-----LEDDPEAAYTTRGGKI 183
Query: 781 P-GYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSV 839
P + PE K T SDV+S G+V E++ S+G+ E++ ++ +V
Sbjct: 184 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM------SYGERPYWEMS---NQDVIKAV 234
Query: 840 IDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883
+G P +C +L L C Q + + RP +++ L+ +
Sbjct: 235 DEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 278
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 129/284 (45%), Gaps = 24/284 (8%)
Query: 606 LATNNFNSSTQIGQGGYGKVYKGILP----DGTVVAVKRAQEGSLQGEK-EFLTEIQFLS 660
L N + +G G +G+V G L VA+K + G + ++ +FL E +
Sbjct: 30 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 89
Query: 661 RLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGI 720
+ H N++ L G + M+V E+M NG+L D K + + G + G+
Sbjct: 90 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGM 148
Query: 721 LYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGT 780
YL +D HRD+ A NIL++ KV+DFGLSR+ +E A +T
Sbjct: 149 KYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRV-----LEDDPEAAYTTRGGKI 200
Query: 781 P-GYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSV 839
P + PE K T SDV+S G+V E++ S+G+ E++ ++ +V
Sbjct: 201 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM------SYGERPYWEMS---NQDVIKAV 251
Query: 840 IDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883
+G P +C +L L C Q + + RP +++ L+ +
Sbjct: 252 DEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 295
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 134/290 (46%), Gaps = 31/290 (10%)
Query: 616 QIGQGGYGKV----YKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSL 670
Q+G+G +G V Y + + G VVAVK+ Q + + ++F EI+ L L H N+V
Sbjct: 20 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 671 VGYCDEEGEQ--MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEAD 728
G C G + L+ E++ G+LRD L A + E + L +G+ YL T+
Sbjct: 80 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHA-ERIDHIKLLQYTSQICKGMEYLGTKR- 137
Query: 729 PPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPG-----Y 783
HRD+ NIL++++ K+ DFGL++ ++P PG +
Sbjct: 138 --YIHRDLATRNILVENENRVKIGDFGLTK---------VLPQDKEXXKVKEPGESPIFW 186
Query: 784 LDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQP-ISHGKNIVREVNIAYQSSMM-FSVID 841
PE K + SDV+S GVV EL T ++ S +R + Q M+ F +I+
Sbjct: 187 YAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIE 246
Query: 842 --GNMGSYPSE--CVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMM 887
N G P C ++ + +C + + RPS ++ ++ I + M
Sbjct: 247 LLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 296
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 129/295 (43%), Gaps = 42/295 (14%)
Query: 603 EMALATNNFNSSTQIGQGGYGKVY----KGILPDG--TVVAVKRAQEGSLQGEK-EFLTE 655
E +A S ++GQG +G VY KG++ D T VA+K E + E+ EFL E
Sbjct: 4 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 63
Query: 656 IQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKE--------PLGFA 707
+ + ++V L+G + +++ E M+ G L+ L + E P +
Sbjct: 64 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 123
Query: 708 MRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI-- 765
+ +A + G+ YL+ HRD+ A N ++ FT K+ DFG++R D
Sbjct: 124 KMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXR 180
Query: 766 ---EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKN 822
+G++P ++ PE T SDV+S GVV E+ T + G
Sbjct: 181 KGGKGLLPVR----------WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQG-- 228
Query: 823 IVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVM 877
++ + + F V++G + P C + ++L C Q RPS E++
Sbjct: 229 ------LSNEQVLRF-VMEGGLLDKPDNCPDMLLELMRMCWQYNPKMRPSFLEII 276
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 92.8 bits (229), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 122/273 (44%), Gaps = 24/273 (8%)
Query: 617 IGQGGYGKVYKGILP----DGTVVAVKRAQEGSLQGEK-EFLTEIQFLSRLHHRNLVSLV 671
IG G +G+V G L VA+K + G + ++ +FL E + + H N+V L
Sbjct: 51 IGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHLE 110
Query: 672 GYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPV 731
G M+V EFM NG L D K + + G + G+ YL AD
Sbjct: 111 GVVTRGKPVMIVIEFMENGAL-DAFLRKHDGQFTVIQLVGMLRGIAAGMRYL---ADMGY 166
Query: 732 FHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT 791
HRD+ A NIL++ KV+DFGLSR+ D E + + +T K + PE
Sbjct: 167 VHRDLAARNILVNSNLVCKVSDFGLSRVIE-DDPEAV---YTTTGGKIPVRWTAPEAIQY 222
Query: 792 HKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSE 850
K T SDV+S G+V E+++ G +P N ++ ++ +G P +
Sbjct: 223 RKFTSASDVWSYGIVMWEVMSYGERPYWDMSN----------QDVIKAIEEGYRLPAPMD 272
Query: 851 CVEKFIKLALKCCQDETDARPSMSEVMRELESI 883
C +L L C Q E RP +++ L+ +
Sbjct: 273 CPAGLHQLMLDCWQKERAERPKFEQIVGILDKM 305
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 129/299 (43%), Gaps = 42/299 (14%)
Query: 599 FTYGEMALATNNFNSSTQIGQGGYGKVY----KGILPDG--TVVAVKRAQEGSLQGEK-E 651
F E +A S ++GQG +G VY KG++ D T VA+K E + E+ E
Sbjct: 6 FVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE 65
Query: 652 FLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKE--------P 703
FL E + + ++V L+G + +++ E M+ G L+ L + E P
Sbjct: 66 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP 125
Query: 704 LGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 763
+ + +A + G+ YL+ HRD+ A N ++ FT K+ DFG++R
Sbjct: 126 PSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET 182
Query: 764 DI-----EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPIS 818
D +G++P ++ PE T SDV+S GVV E+ T +
Sbjct: 183 DYYRKGGKGLLPVR----------WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPY 232
Query: 819 HGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVM 877
G ++ + + F V++G + P C + +L C Q RPS E++
Sbjct: 233 QG--------LSNEQVLRF-VMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 282
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 134/290 (46%), Gaps = 31/290 (10%)
Query: 616 QIGQGGYGKV----YKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSL 670
Q+G+G +G V Y + + G VVAVK+ Q + + ++F EI+ L L H N+V
Sbjct: 18 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 77
Query: 671 VGYCDEEGEQ--MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEAD 728
G C G + L+ E++ G+LRD L K KE + L +G+ YL T+
Sbjct: 78 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLGTKR- 135
Query: 729 PPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPG-----Y 783
HR++ NIL++++ K+ DFGL++ ++P PG +
Sbjct: 136 --YIHRNLATRNILVENENRVKIGDFGLTK---------VLPQDKEYYKVKEPGESPIFW 184
Query: 784 LDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQP-ISHGKNIVREVNIAYQSSMM-FSVID 841
PE K + SDV+S GVV EL T ++ S +R + Q M+ F +I+
Sbjct: 185 YAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIE 244
Query: 842 --GNMGSYPSE--CVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMM 887
N G P C ++ + +C + + RPS ++ ++ I + M
Sbjct: 245 LLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 294
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 128/295 (43%), Gaps = 42/295 (14%)
Query: 603 EMALATNNFNSSTQIGQGGYGKVY----KGILPDG--TVVAVKRAQEGSLQGEK-EFLTE 655
E +A S ++GQG +G VY KG++ D T VA+K E + E+ EFL E
Sbjct: 13 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 72
Query: 656 IQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKE--------PLGFA 707
+ + ++V L+G + +++ E M+ G L+ L + E P +
Sbjct: 73 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 132
Query: 708 MRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI-- 765
+ +A + G+ YL+ HRD+ A N ++ FT K+ DFG++R D
Sbjct: 133 KMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXR 189
Query: 766 ---EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKN 822
+G++P ++ PE T SDV+S GVV E+ T + G
Sbjct: 190 KGGKGLLPVR----------WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQG-- 237
Query: 823 IVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVM 877
++ + + F V++G + P C + +L C Q RPS E++
Sbjct: 238 ------LSNEQVLRF-VMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 285
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 128/284 (45%), Gaps = 24/284 (8%)
Query: 606 LATNNFNSSTQIGQGGYGKVYKGILP----DGTVVAVKRAQEGSLQGEK-EFLTEIQFLS 660
L N + +G G +G+V G L VA+K + G + ++ +FL E +
Sbjct: 13 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 72
Query: 661 RLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGI 720
+ H N++ L G + M+V E M NG+L D K + + G + G+
Sbjct: 73 QFDHPNIIRLEGVVTKSKPVMIVTEXMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGM 131
Query: 721 LYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGT 780
YL +D HRD+ A NIL++ KV+DFGLSR+ +E A +T
Sbjct: 132 KYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRV-----LEDDPEAAYTTRGGKI 183
Query: 781 P-GYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSV 839
P + PE K T SDV+S G+V E++ S+G+ E++ ++ +V
Sbjct: 184 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM------SYGERPYWEMS---NQDVIKAV 234
Query: 840 IDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883
+G P +C +L L C Q + + RP +++ L+ +
Sbjct: 235 DEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 278
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 128/285 (44%), Gaps = 30/285 (10%)
Query: 616 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD 675
++G G +G+V+ T VAVK + GS+ E FL E + L H LV L
Sbjct: 195 KLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA-FLAEANVMKTLQHDKLVKLHAVVT 253
Query: 676 EEGEQMLVYEFMSNGTLRDQLSAK--SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFH 733
+E ++ EFM+ G+L D L + SK+PL + S + + G+ ++ H
Sbjct: 254 KE-PIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQI--AEGMAFIEQRN---YIH 307
Query: 734 RDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHK 793
RD++A+NIL+ K+ADFGL+R+ + D E +K T PE
Sbjct: 308 RDLRAANILVSASLVCKIADFGLARV--IEDNEYTAREGAKFPIKWTA----PEAINFGS 361
Query: 794 LTDKSDVYSLGVVFLELLT-GMQPISHGKN--IVREVNIAYQSSMMFSVIDGNMGSYPSE 850
T KSDV+S G++ +E++T G P N ++R + Y+ P
Sbjct: 362 FTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPR------------PEN 409
Query: 851 CVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTP 895
C E+ + ++C ++ + RP+ + L+ + + P
Sbjct: 410 CPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTATESQXEEIP 454
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 92.0 bits (227), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 124/277 (44%), Gaps = 30/277 (10%)
Query: 617 IGQGGYGKVYKGILP----DGTVVAVKRAQEGSLQGEK-EFLTEIQFLSRLHHRNLVSLV 671
IG G +G+V G L VA+K + G + ++ +FL+E + + H N++ L
Sbjct: 41 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLE 100
Query: 672 GYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPV 731
G + M++ EFM NG+L D ++ + + G + G+ YL AD
Sbjct: 101 GVVTKSTPVMIITEFMENGSL-DSFLRQNDGQFTVIQLVGMLRGIAAGMKYL---ADMNY 156
Query: 732 FHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTP-GYLDPEYFL 790
HRD+ A NIL++ KV+DFGLSR + + P + S + P + PE
Sbjct: 157 VHRDLAARNILVNSNLVCKVSDFGLSRFL---EDDTSDPTYTSALGGKIPIRWTAPEAIQ 213
Query: 791 THKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSY--- 847
K T SDV+S G+V E++ S+G+ Y VI+ Y
Sbjct: 214 YRKFTSASDVWSYGIVMWEVM------SYGER-------PYWDMTNQDVINAIEQDYRLP 260
Query: 848 -PSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883
P +C +L L C Q + + RP +++ L+ +
Sbjct: 261 PPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKM 297
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 128/295 (43%), Gaps = 42/295 (14%)
Query: 603 EMALATNNFNSSTQIGQGGYGKVY----KGILPDG--TVVAVKRAQEGSLQGEK-EFLTE 655
E +A S ++GQG +G VY KG++ D T VA+K E + E+ EFL E
Sbjct: 19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 78
Query: 656 IQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKE--------PLGFA 707
+ + ++V L+G + +++ E M+ G L+ L + E P +
Sbjct: 79 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 138
Query: 708 MRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI-- 765
+ +A + G+ YL+ HRD+ A N ++ FT K+ DFG++R D
Sbjct: 139 KMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR 195
Query: 766 ---EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKN 822
+G++P ++ PE T SDV+S GVV E+ T + G
Sbjct: 196 KGGKGLLPVR----------WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQG-- 243
Query: 823 IVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVM 877
++ + + F V++G + P C + +L C Q RPS E++
Sbjct: 244 ------LSNEQVLRF-VMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 291
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 128/295 (43%), Gaps = 42/295 (14%)
Query: 603 EMALATNNFNSSTQIGQGGYGKVY----KGILPDG--TVVAVKRAQEGSLQGEK-EFLTE 655
E +A S ++GQG +G VY KG++ D T VA+K E + E+ EFL E
Sbjct: 41 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 100
Query: 656 IQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKE--------PLGFA 707
+ + ++V L+G + +++ E M+ G L+ L + E P +
Sbjct: 101 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 160
Query: 708 MRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI-- 765
+ +A + G+ YL+ HRD+ A N ++ FT K+ DFG++R D
Sbjct: 161 KMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR 217
Query: 766 ---EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKN 822
+G++P ++ PE T SDV+S GVV E+ T + G
Sbjct: 218 KGGKGLLPVR----------WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQG-- 265
Query: 823 IVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVM 877
++ + + F V++G + P C + +L C Q RPS E++
Sbjct: 266 ------LSNEQVLRF-VMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 313
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 128/295 (43%), Gaps = 42/295 (14%)
Query: 603 EMALATNNFNSSTQIGQGGYGKVY----KGILPDG--TVVAVKRAQEGSLQGEK-EFLTE 655
E +A S ++GQG +G VY KG++ D T VA+K E + E+ EFL E
Sbjct: 12 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 71
Query: 656 IQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKE--------PLGFA 707
+ + ++V L+G + +++ E M+ G L+ L + E P +
Sbjct: 72 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 131
Query: 708 MRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI-- 765
+ +A + G+ YL+ HRD+ A N ++ FT K+ DFG++R D
Sbjct: 132 KMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR 188
Query: 766 ---EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKN 822
+G++P ++ PE T SDV+S GVV E+ T + G
Sbjct: 189 KGGKGLLPVR----------WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQG-- 236
Query: 823 IVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVM 877
++ + + F V++G + P C + +L C Q RPS E++
Sbjct: 237 ------LSNEQVLRF-VMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 284
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 128/295 (43%), Gaps = 42/295 (14%)
Query: 603 EMALATNNFNSSTQIGQGGYGKVY----KGILPDG--TVVAVKRAQEGSLQGEK-EFLTE 655
E +A S ++GQG +G VY KG++ D T VA+K E + E+ EFL E
Sbjct: 13 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 72
Query: 656 IQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKE--------PLGFA 707
+ + ++V L+G + +++ E M+ G L+ L + E P +
Sbjct: 73 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 132
Query: 708 MRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI-- 765
+ +A + G+ YL+ HRD+ A N ++ FT K+ DFG++R D
Sbjct: 133 KMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR 189
Query: 766 ---EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKN 822
+G++P ++ PE T SDV+S GVV E+ T + G
Sbjct: 190 KGGKGLLPVR----------WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQG-- 237
Query: 823 IVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVM 877
++ + + F V++G + P C + +L C Q RPS E++
Sbjct: 238 ------LSNEQVLRF-VMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 285
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 128/295 (43%), Gaps = 42/295 (14%)
Query: 603 EMALATNNFNSSTQIGQGGYGKVY----KGILPDG--TVVAVKRAQEGSLQGEK-EFLTE 655
E +A S ++GQG +G VY KG++ D T VA+K E + E+ EFL E
Sbjct: 12 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 71
Query: 656 IQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKE--------PLGFA 707
+ + ++V L+G + +++ E M+ G L+ L + E P +
Sbjct: 72 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 131
Query: 708 MRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI-- 765
+ +A + G+ YL+ HRD+ A N ++ FT K+ DFG++R D
Sbjct: 132 KMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR 188
Query: 766 ---EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKN 822
+G++P ++ PE T SDV+S GVV E+ T + G
Sbjct: 189 KGGKGLLPVR----------WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQG-- 236
Query: 823 IVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVM 877
++ + + F V++G + P C + +L C Q RPS E++
Sbjct: 237 ------LSNEQVLRF-VMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 284
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 128/295 (43%), Gaps = 42/295 (14%)
Query: 603 EMALATNNFNSSTQIGQGGYGKVY----KGILPDG--TVVAVKRAQEGSLQGEK-EFLTE 655
E +A S ++GQG +G VY KG++ D T VA+K E + E+ EFL E
Sbjct: 6 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 65
Query: 656 IQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKE--------PLGFA 707
+ + ++V L+G + +++ E M+ G L+ L + E P +
Sbjct: 66 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 125
Query: 708 MRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI-- 765
+ +A + G+ YL+ HRD+ A N ++ FT K+ DFG++R D
Sbjct: 126 KMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR 182
Query: 766 ---EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKN 822
+G++P ++ PE T SDV+S GVV E+ T + G
Sbjct: 183 KGGKGLLPVR----------WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQG-- 230
Query: 823 IVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVM 877
++ + + F V++G + P C + +L C Q RPS E++
Sbjct: 231 ------LSNEQVLRF-VMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 278
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 131/286 (45%), Gaps = 36/286 (12%)
Query: 616 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD 675
+IG G +G VYKG V + + Q + F E+ L + H N++ +GY
Sbjct: 43 RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 102
Query: 676 EEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAM--RLSIALGSSRGILYLHTEADPPVFH 733
+ + +V ++ +L L + F M + IA +++G+ YLH ++ + H
Sbjct: 103 KP-QLAIVTQWCEGSSLYHHLHIIETK---FEMIKLIDIARQTAQGMDYLHAKS---IIH 155
Query: 734 RDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHK 793
RD+K++NI L T K+ DFGL+ + +H + G+ ++ PE +
Sbjct: 156 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWS-----GSHQFEQLSGSILWMAPEVI---R 207
Query: 794 LTDK------SDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDG----N 843
+ DK SDVY+ G+V EL+TG P S NI + ++F V G +
Sbjct: 208 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYS---------NINNRDQIIFMVGRGYLSPD 258
Query: 844 MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPE 889
+ S C + +L +C + + D RP +++ +E + +P+
Sbjct: 259 LSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSLPK 304
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 131/286 (45%), Gaps = 36/286 (12%)
Query: 616 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD 675
+IG G +G VYKG V + + Q + F E+ L + H N++ +GY
Sbjct: 17 RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 76
Query: 676 EEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAM--RLSIALGSSRGILYLHTEADPPVFH 733
+ + +V ++ +L L + F M + IA +++G+ YLH ++ + H
Sbjct: 77 KP-QLAIVTQWCEGSSLYHHLHIIETK---FEMIKLIDIARQTAQGMDYLHAKS---IIH 129
Query: 734 RDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHK 793
RD+K++NI L T K+ DFGL+ + +H + G+ ++ PE +
Sbjct: 130 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWS-----GSHQFEQLSGSILWMAPEVI---R 181
Query: 794 LTDK------SDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDG----N 843
+ DK SDVY+ G+V EL+TG P S NI + ++F V G +
Sbjct: 182 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYS---------NINNRDQIIFMVGRGYLSPD 232
Query: 844 MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPE 889
+ S C + +L +C + + D RP +++ +E + +P+
Sbjct: 233 LSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSLPK 278
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 121/279 (43%), Gaps = 22/279 (7%)
Query: 595 GVRSFTYGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLT 654
G YG + + ++G G +G V G VA+K +EGS+ E EF+
Sbjct: 1 GTAGLGYGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIE 59
Query: 655 EIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIAL 714
E + + L H LV L G C ++ ++ E+M+NG L + L + + L +
Sbjct: 60 EAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLR-EMRHRFQTQQLLEMCK 118
Query: 715 GSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVS 774
+ YL ++ HRD+ A N L++ + KV+DFGLSR V D E
Sbjct: 119 DVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRY--VLDDEYTSSVGSK 173
Query: 775 TVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQS 833
V+ +P PE + K + KSD+++ GV+ E+ + G P N +IA Q
Sbjct: 174 FPVRWSP----PEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIA-QG 228
Query: 834 SMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPS 872
++ P EK + C ++ D RP+
Sbjct: 229 LRLYR---------PHLASEKVYTIMYSCWHEKADERPT 258
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 125/271 (46%), Gaps = 30/271 (11%)
Query: 616 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD 675
++G G +G+V+ T VAVK + GS+ E FL E + L H LV L
Sbjct: 22 KLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA-FLAEANVMKTLQHDKLVKLHAVVT 80
Query: 676 EEGEQMLVYEFMSNGTLRDQLSAK--SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFH 733
+E ++ EFM+ G+L D L + SK+PL + S + + G+ ++ H
Sbjct: 81 KEP-IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQI--AEGMAFIEQRN---YIH 134
Query: 734 RDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHK 793
RD++A+NIL+ K+ADFGL+R+ + D E +K T PE
Sbjct: 135 RDLRAANILVSASLVCKIADFGLARV--IEDNEYTAREGAKFPIKWTA----PEAINFGS 188
Query: 794 LTDKSDVYSLGVVFLELLT-GMQPISHGKN--IVREVNIAYQSSMMFSVIDGNMGSYPSE 850
T KSDV+S G++ +E++T G P N ++R + Y+ P
Sbjct: 189 FTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPR------------PEN 236
Query: 851 CVEKFIKLALKCCQDETDARPSMSEVMRELE 881
C E+ + ++C ++ + RP+ + L+
Sbjct: 237 CPEELYNIMMRCWKNRPEERPTFEYIQSVLD 267
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 131/286 (45%), Gaps = 36/286 (12%)
Query: 616 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD 675
+IG G +G VYKG V + + Q + F E+ L + H N++ +GY
Sbjct: 42 RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 101
Query: 676 EEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAM--RLSIALGSSRGILYLHTEADPPVFH 733
+ + +V ++ +L L + F M + IA +++G+ YLH ++ + H
Sbjct: 102 KP-QLAIVTQWCEGSSLYHHLHIIETK---FEMIKLIDIARQTAQGMDYLHAKS---IIH 154
Query: 734 RDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHK 793
RD+K++NI L T K+ DFGL+ + +H + G+ ++ PE +
Sbjct: 155 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWS-----GSHQFEQLSGSILWMAPEVI---R 206
Query: 794 LTDK------SDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDG----N 843
+ DK SDVY+ G+V EL+TG P S NI + ++F V G +
Sbjct: 207 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYS---------NINNRDQIIFMVGRGYLSPD 257
Query: 844 MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPE 889
+ S C + +L +C + + D RP +++ +E + +P+
Sbjct: 258 LSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSLPK 303
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 131/286 (45%), Gaps = 36/286 (12%)
Query: 616 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD 675
+IG G +G VYKG V + + Q + F E+ L + H N++ +GY
Sbjct: 35 RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 94
Query: 676 EEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAM--RLSIALGSSRGILYLHTEADPPVFH 733
+ + +V ++ +L L + F M + IA +++G+ YLH ++ + H
Sbjct: 95 KP-QLAIVTQWCEGSSLYHHLHIIETK---FEMIKLIDIARQTAQGMDYLHAKS---IIH 147
Query: 734 RDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHK 793
RD+K++NI L T K+ DFGL+ + +H + G+ ++ PE +
Sbjct: 148 RDLKSNNIFLHEDLTVKIGDFGLA-----TEKSRWSGSHQFEQLSGSILWMAPEVI---R 199
Query: 794 LTDK------SDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDG----N 843
+ DK SDVY+ G+V EL+TG P S NI + ++F V G +
Sbjct: 200 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYS---------NINNRDQIIFMVGRGYLSPD 250
Query: 844 MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPE 889
+ S C + +L +C + + D RP +++ +E + +P+
Sbjct: 251 LSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSLPK 296
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 131/286 (45%), Gaps = 36/286 (12%)
Query: 616 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD 675
+IG G +G VYKG V + + Q + F E+ L + H N++ +GY
Sbjct: 20 RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 79
Query: 676 EEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAM--RLSIALGSSRGILYLHTEADPPVFH 733
+ + +V ++ +L L + F M + IA +++G+ YLH ++ + H
Sbjct: 80 KP-QLAIVTQWCEGSSLYHHLHIIETK---FEMIKLIDIARQTAQGMDYLHAKS---IIH 132
Query: 734 RDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHK 793
RD+K++NI L T K+ DFGL+ + +H + G+ ++ PE +
Sbjct: 133 RDLKSNNIFLHEDLTVKIGDFGLATVK-----SRWSGSHQFEQLSGSILWMAPEVI---R 184
Query: 794 LTDK------SDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDG----N 843
+ DK SDVY+ G+V EL+TG P S NI + ++F V G +
Sbjct: 185 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYS---------NINNRDQIIFMVGRGYLSPD 235
Query: 844 MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPE 889
+ S C + +L +C + + D RP +++ +E + +P+
Sbjct: 236 LSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSLPK 281
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 131/286 (45%), Gaps = 36/286 (12%)
Query: 616 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD 675
+IG G +G VYKG V + + Q + F E+ L + H N++ +GY
Sbjct: 20 RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 79
Query: 676 EEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAM--RLSIALGSSRGILYLHTEADPPVFH 733
+ + +V ++ +L L + F M + IA +++G+ YLH ++ + H
Sbjct: 80 KP-QLAIVTQWCEGSSLYHHLHIIETK---FEMIKLIDIARQTAQGMDYLHAKS---IIH 132
Query: 734 RDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHK 793
RD+K++NI L T K+ DFGL+ + +H + G+ ++ PE +
Sbjct: 133 RDLKSNNIFLHEDLTVKIGDFGLATVK-----SRWSGSHQFEQLSGSILWMAPEVI---R 184
Query: 794 LTDK------SDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDG----N 843
+ DK SDVY+ G+V EL+TG P S NI + ++F V G +
Sbjct: 185 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYS---------NINNRDQIIFMVGRGYLSPD 235
Query: 844 MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPE 889
+ S C + +L +C + + D RP +++ +E + +P+
Sbjct: 236 LSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSLPK 281
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 91.3 bits (225), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 120/273 (43%), Gaps = 22/273 (8%)
Query: 601 YGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLS 660
YG + + ++G G +G V G VA+K +EGS+ E EF+ E + +
Sbjct: 16 YGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMM 74
Query: 661 RLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGI 720
L H LV L G C ++ ++ E+M+NG L + L + + L + +
Sbjct: 75 NLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLR-EMRHRFQTQQLLEMCKDVCEAM 133
Query: 721 LYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGT 780
YL ++ HRD+ A N L++ + KV+DFGLSR V D E V+ +
Sbjct: 134 EYLESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRY--VLDDEYTSSVGSKFPVRWS 188
Query: 781 PGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSV 839
P PE + K + KSD+++ GV+ E+ + G P N +IA Q ++
Sbjct: 189 P----PEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIA-QGLRLYR- 242
Query: 840 IDGNMGSYPSECVEKFIKLALKCCQDETDARPS 872
P EK + C ++ D RP+
Sbjct: 243 --------PHLASEKVYTIMYSCWHEKADERPT 267
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 91.3 bits (225), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 120/273 (43%), Gaps = 22/273 (8%)
Query: 601 YGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLS 660
YG + + ++G G +G V G VA+K +EGS+ E EF+ E + +
Sbjct: 16 YGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMM 74
Query: 661 RLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGI 720
L H LV L G C ++ ++ E+M+NG L + L + + L + +
Sbjct: 75 NLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLR-EMRHRFQTQQLLEMCKDVCEAM 133
Query: 721 LYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGT 780
YL ++ HRD+ A N L++ + KV+DFGLSR V D E V+ +
Sbjct: 134 EYLESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRY--VLDDEETSSVGSKFPVRWS 188
Query: 781 PGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSV 839
P PE + K + KSD+++ GV+ E+ + G P N +IA Q ++
Sbjct: 189 P----PEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIA-QGLRLYR- 242
Query: 840 IDGNMGSYPSECVEKFIKLALKCCQDETDARPS 872
P EK + C ++ D RP+
Sbjct: 243 --------PHLASEKVYTIMYSCWHEKADERPT 267
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 91.3 bits (225), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 128/295 (43%), Gaps = 42/295 (14%)
Query: 603 EMALATNNFNSSTQIGQGGYGKVY----KGILPDG--TVVAVKRAQEGSLQGEK-EFLTE 655
E +A S ++GQG +G VY KG++ D T VA+K E + E+ EFL E
Sbjct: 6 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 65
Query: 656 IQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKE--------PLGFA 707
+ + ++V L+G + +++ E M+ G L+ L + E P +
Sbjct: 66 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 125
Query: 708 MRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI-- 765
+ +A + G+ YL+ HRD+ A N + FT K+ DFG++R D
Sbjct: 126 KMIQMAGEIADGMAYLNANK---FVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYR 182
Query: 766 ---EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKN 822
+G++P ++ PE T SDV+S GVV E+ T + G
Sbjct: 183 KGGKGLLPVR----------WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQG-- 230
Query: 823 IVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVM 877
++ + + F V++G + P C + ++L C Q RPS E++
Sbjct: 231 ------LSNEQVLRF-VMEGGLLDKPDNCPDMLLELMRMCWQYNPKMRPSFLEII 278
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 125/276 (45%), Gaps = 28/276 (10%)
Query: 617 IGQGGYGKVYKGILP----DGTVVAVKRAQEGSLQGEK-EFLTEIQFLSRLHHRNLVSLV 671
IG G +G+V +G L + VA+K + G + ++ EFL+E + + H N++ L
Sbjct: 22 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLE 81
Query: 672 GYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPV 731
G M++ EFM NG L L + + + G + G+ YL A+
Sbjct: 82 GVVTNSMPVMILTEFMENGALDSFLRLNDGQ-FTVIQLVGMLRGIASGMRYL---AEMSY 137
Query: 732 FHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTP-GYLDPEYFL 790
HRD+ A NIL++ KV+DFGLSR + P + S++ P + PE
Sbjct: 138 VHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSD---PTYTSSLGGKIPIRWTAPEAIA 194
Query: 791 THKLTDKSDVYSLGVVFLELLT-GMQPI--SHGKNIVREVNIAYQSSMMFSVIDGNMGSY 847
K T SD +S G+V E+++ G +P ++++ + Y+
Sbjct: 195 FRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQDYRLPP------------ 242
Query: 848 PSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883
P +C +L L C Q + +ARP +V+ L+ +
Sbjct: 243 PPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKM 278
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 131/286 (45%), Gaps = 36/286 (12%)
Query: 616 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD 675
+IG G +G VYKG V + + Q + F E+ L + H N++ +GY
Sbjct: 43 RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 102
Query: 676 EEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAM--RLSIALGSSRGILYLHTEADPPVFH 733
+ + +V ++ +L L + F M + IA +++G+ YLH ++ + H
Sbjct: 103 KP-QLAIVTQWCEGSSLYHHLHIIETK---FEMIKLIDIARQTAQGMDYLHAKS---IIH 155
Query: 734 RDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHK 793
RD+K++NI L T K+ DFGL+ + +H + G+ ++ PE +
Sbjct: 156 RDLKSNNIFLHEDLTVKIGDFGLA-----TEKSRWSGSHQFEQLSGSILWMAPEVI---R 207
Query: 794 LTDK------SDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDG----N 843
+ DK SDVY+ G+V EL+TG P S NI + ++F V G +
Sbjct: 208 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYS---------NINNRDQIIFMVGRGYLSPD 258
Query: 844 MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPE 889
+ S C + +L +C + + D RP +++ +E + +P+
Sbjct: 259 LSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSLPK 304
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 130/285 (45%), Gaps = 36/285 (12%)
Query: 616 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD 675
+IG G +G VYKG V + + Q + F E+ L + H N++ +GY
Sbjct: 15 RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 74
Query: 676 EEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAM--RLSIALGSSRGILYLHTEADPPVFH 733
+ + +V ++ +L L + F M + IA +++G+ YLH ++ + H
Sbjct: 75 KP-QLAIVTQWCEGSSLYHHLHIIETK---FEMIKLIDIARQTAQGMDYLHAKS---IIH 127
Query: 734 RDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHK 793
RD+K++NI L T K+ DFGL+ + +H + G+ ++ PE +
Sbjct: 128 RDLKSNNIFLHEDLTVKIGDFGLATVK-----SRWSGSHQFEQLSGSILWMAPEVI---R 179
Query: 794 LTDK------SDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDG----N 843
+ DK SDVY+ G+V EL+TG P S NI + ++F V G +
Sbjct: 180 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYS---------NINNRDQIIFMVGRGYLSPD 230
Query: 844 MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMP 888
+ S C + +L +C + + D RP +++ +E + +P
Sbjct: 231 LSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSLP 275
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 131/286 (45%), Gaps = 36/286 (12%)
Query: 616 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD 675
+IG G +G VYKG V + + Q + F E+ L + H N++ +GY
Sbjct: 15 RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 74
Query: 676 EEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAM--RLSIALGSSRGILYLHTEADPPVFH 733
+ + +V ++ +L L + F M + IA +++G+ YLH ++ + H
Sbjct: 75 KP-QLAIVTQWCEGSSLYHHLHIIETK---FEMIKLIDIARQTAQGMDYLHAKS---IIH 127
Query: 734 RDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHK 793
RD+K++NI L T K+ DFGL+ + +H + G+ ++ PE +
Sbjct: 128 RDLKSNNIFLHEDLTVKIGDFGLA-----TEKSRWSGSHQFEQLSGSILWMAPEVI---R 179
Query: 794 LTDK------SDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDG----N 843
+ DK SDVY+ G+V EL+TG P S NI + ++F V G +
Sbjct: 180 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYS---------NINNRDQIIFMVGRGYLSPD 230
Query: 844 MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPE 889
+ S C + +L +C + + D RP +++ +E + +P+
Sbjct: 231 LSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSLPK 276
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 123/282 (43%), Gaps = 42/282 (14%)
Query: 616 QIGQGGYGKVYKGILPD------GTVVAVKRAQE-GSLQGEKEFLTEIQFLSRLHHRNLV 668
++GQG +G VY+G D T VAVK E SL+ EFL E + ++V
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 669 SLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKE--------PLGFAMRLSIALGSSRGI 720
L+G + ++V E M++G L+ L + E P + +A + G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 721 LYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI-----EGIVPAHVST 775
YL+ + HRD+ A N ++ H FT K+ DFG++R D +G++P
Sbjct: 144 AYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR--- 197
Query: 776 VVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSM 835
++ PE T SD++S GVV E+ + + G ++ + +
Sbjct: 198 -------WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQG--------LSNEQVL 242
Query: 836 MFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVM 877
F V+DG P C E+ L C Q + RP+ E++
Sbjct: 243 KF-VMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIV 283
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 130/286 (45%), Gaps = 36/286 (12%)
Query: 616 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD 675
+IG G +G VYKG V + + Q + F E+ L + H N++ +GY
Sbjct: 15 RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 74
Query: 676 EEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAM--RLSIALGSSRGILYLHTEADPPVFH 733
+ +V ++ +L L + F M + IA +++G+ YLH ++ + H
Sbjct: 75 AP-QLAIVTQWCEGSSLYHHLHIIETK---FEMIKLIDIARQTAQGMDYLHAKS---IIH 127
Query: 734 RDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHK 793
RD+K++NI L T K+ DFGL+ + +H + G+ ++ PE +
Sbjct: 128 RDLKSNNIFLHEDLTVKIGDFGLATVK-----SRWSGSHQFEQLSGSILWMAPEVI---R 179
Query: 794 LTDK------SDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDG----N 843
+ DK SDVY+ G+V EL+TG P S NI + ++F V G +
Sbjct: 180 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYS---------NINNRDQIIFMVGRGYLSPD 230
Query: 844 MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPE 889
+ S C + +L +C + + D RP +++ +E + +P+
Sbjct: 231 LSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSLPK 276
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 124/283 (43%), Gaps = 32/283 (11%)
Query: 605 ALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHH 664
AL IG+G +G V G G VAVK + + + FL E +++L H
Sbjct: 2 ALNMKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDATA--QAFLAEASVMTQLRH 58
Query: 665 RNLVSLVGY-CDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYL 723
NLV L+G +E+G +V E+M+ G+L D L ++ + LG L +L + YL
Sbjct: 59 SNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL 118
Query: 724 HTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGY 783
HRD+ A N+L+ AKV+DFGL++ A G +P VK T
Sbjct: 119 EGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLP------VKWTA-- 167
Query: 784 LDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISH--GKNIVREVNIAYQSSMMFSVI 840
PE K + KSDV+S G++ E+ + G P K++V V Y+
Sbjct: 168 --PEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDA----- 220
Query: 841 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883
P C ++ C + RPS ++ +LE I
Sbjct: 221 -------PDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHI 256
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 122/278 (43%), Gaps = 32/278 (11%)
Query: 617 IGQGGYGKVYKGILP----DGTVVAVKRAQEGSLQGEK-EFLTEIQFLSRLHHRNLVSLV 671
IG G +G+V +G L + VA+K + G + ++ EFL+E + + H N++ L
Sbjct: 24 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLE 83
Query: 672 GYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPV 731
G M++ EFM NG L L + + + G + G+ YL A+
Sbjct: 84 GVVTNSMPVMILTEFMENGALDSFLRLNDGQ-FTVIQLVGMLRGIASGMRYL---AEMSY 139
Query: 732 FHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTP-GYLDPEYFL 790
HRD+ A NIL++ KV+DFGLSR + P S++ P + PE
Sbjct: 140 VHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSD---PTETSSLGGKIPIRWTAPEAIA 196
Query: 791 THKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSY-- 847
K T SD +S G+V E+++ G +P Y VI+ Y
Sbjct: 197 FRKFTSASDAWSYGIVMWEVMSFGERP--------------YWDMSNQDVINAIEQDYRL 242
Query: 848 --PSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883
P +C +L L C Q + +ARP +V+ L+ +
Sbjct: 243 PPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKM 280
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 124/283 (43%), Gaps = 32/283 (11%)
Query: 605 ALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHH 664
AL IG+G +G V G G VAVK + + + FL E +++L H
Sbjct: 17 ALNMKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDATA--QAFLAEASVMTQLRH 73
Query: 665 RNLVSLVGY-CDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYL 723
NLV L+G +E+G +V E+M+ G+L D L ++ + LG L +L + YL
Sbjct: 74 SNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL 133
Query: 724 HTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGY 783
HRD+ A N+L+ AKV+DFGL++ A G +P VK T
Sbjct: 134 EGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLP------VKWTA-- 182
Query: 784 LDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISH--GKNIVREVNIAYQSSMMFSVI 840
PE K + KSDV+S G++ E+ + G P K++V V Y+
Sbjct: 183 --PEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDA----- 235
Query: 841 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883
P C ++ C + RPS ++ +LE I
Sbjct: 236 -------PDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHI 271
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 90.1 bits (222), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 129/295 (43%), Gaps = 42/295 (14%)
Query: 603 EMALATNNFNSSTQIGQGGYGKVY----KGILPDG--TVVAVKRAQEGSLQGEK-EFLTE 655
E +A S ++GQG +G VY KG++ D T VA+K E + E+ EFL E
Sbjct: 19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 78
Query: 656 IQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLS----AKSKEPL----GFA 707
+ + ++V L+G + +++ E M+ G L+ L A + P+ +
Sbjct: 79 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLS 138
Query: 708 MRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI-- 765
+ +A + G+ YL+ HRD+ A N ++ FT K+ DFG++R D
Sbjct: 139 KMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR 195
Query: 766 ---EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKN 822
+G++P ++ PE T SDV+S GVV E+ T + G
Sbjct: 196 KGGKGLLPVR----------WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQG-- 243
Query: 823 IVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVM 877
++ + + F V++G + P C + +L C Q RPS E++
Sbjct: 244 ------LSNEQVLRF-VMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 291
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 90.1 bits (222), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 126/299 (42%), Gaps = 42/299 (14%)
Query: 599 FTYGEMALATNNFNSSTQIGQGGYGKVYKGILPD------GTVVAVKRAQE-GSLQGEKE 651
F E ++ ++GQG +G VY+G D T VAVK E SL+ E
Sbjct: 7 FVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE 66
Query: 652 FLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKE--------P 703
FL E + ++V L+G + ++V E M++G L+ L + E P
Sbjct: 67 FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPP 126
Query: 704 LGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 763
+ +A + G+ YL+ + HRD+ A N ++ H FT K+ DFG++R
Sbjct: 127 PTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIXET 183
Query: 764 DI-----EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPIS 818
D +G++P ++ PE T SD++S GVV E+ + +
Sbjct: 184 DXXRKGGKGLLPVR----------WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPY 233
Query: 819 HGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVM 877
G ++ + + F V+DG P C E+ L C Q RP+ E++
Sbjct: 234 QG--------LSNEQVLKF-VMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIV 283
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 129/295 (43%), Gaps = 42/295 (14%)
Query: 603 EMALATNNFNSSTQIGQGGYGKVY----KGILPDG--TVVAVKRAQEGSLQGEK-EFLTE 655
E +A S ++GQG +G VY KG++ D T VA+K E + E+ EFL E
Sbjct: 9 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 68
Query: 656 IQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLS----AKSKEPL----GFA 707
+ + ++V L+G + +++ E M+ G L+ L A + P+ +
Sbjct: 69 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLS 128
Query: 708 MRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI-- 765
+ +A + G+ YL+ HRD+ A N ++ FT K+ DFG++R D
Sbjct: 129 KMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR 185
Query: 766 ---EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKN 822
+G++P ++ PE T SDV+S GVV E+ T + G
Sbjct: 186 KGGKGLLPVR----------WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQG-- 233
Query: 823 IVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVM 877
++ + + F V++G + P C + +L C Q RPS E++
Sbjct: 234 ------LSNEQVLRF-VMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 281
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 89.7 bits (221), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 126/299 (42%), Gaps = 42/299 (14%)
Query: 599 FTYGEMALATNNFNSSTQIGQGGYGKVYKGILPD------GTVVAVKRAQE-GSLQGEKE 651
F E ++ ++GQG +G VY+G D T VAVK E SL+ E
Sbjct: 4 FVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE 63
Query: 652 FLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKE--------P 703
FL E + ++V L+G + ++V E M++G L+ L + E P
Sbjct: 64 FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPP 123
Query: 704 LGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 763
+ +A + G+ YL+ + HRD+ A N ++ H FT K+ DFG++R
Sbjct: 124 PTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIXET 180
Query: 764 DI-----EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPIS 818
D +G++P ++ PE T SD++S GVV E+ + +
Sbjct: 181 DXXRKGGKGLLPVR----------WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPY 230
Query: 819 HGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVM 877
G ++ + + F V+DG P C E+ L C Q RP+ E++
Sbjct: 231 QG--------LSNEQVLKF-VMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIV 280
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 123/283 (43%), Gaps = 32/283 (11%)
Query: 605 ALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHH 664
AL IG+G +G V G G VAVK + + + FL E +++L H
Sbjct: 189 ALNMKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDATA--QAFLAEASVMTQLRH 245
Query: 665 RNLVSLVGY-CDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYL 723
NLV L+G +E+G +V E+M+ G+L D L ++ + LG L +L + YL
Sbjct: 246 SNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL 305
Query: 724 HTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGY 783
HRD+ A N+L+ AKV+DFGL++ A G +P VK T
Sbjct: 306 EGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLP------VKWTA-- 354
Query: 784 LDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISH--GKNIVREVNIAYQSSMMFSVI 840
PE K + KSDV+S G++ E+ + G P K++V V Y+
Sbjct: 355 --PEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDA----- 407
Query: 841 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883
P C + C + RP+ ++ +LE I
Sbjct: 408 -------PDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHI 443
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 125/285 (43%), Gaps = 40/285 (14%)
Query: 616 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD 675
++G G +G+V+ T VAVK + GS+ E FL E + L H LV L
Sbjct: 189 KLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA-FLAEANVMKTLQHDKLVKLHAVVT 247
Query: 676 EEGEQMLVYEFMSNGTLRDQLSAK--SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFH 733
+E ++ EFM+ G+L D L + SK+PL + S + + G+ ++ H
Sbjct: 248 KE-PIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQI--AEGMAFIEQRN---YIH 301
Query: 734 RDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHK 793
RD++A+NIL+ K+ADFGL+R+ I+ P ++
Sbjct: 302 RDLRAANILVSASLVCKIADFGLARVGAKFPIKWTAPEAIN----------------FGS 345
Query: 794 LTDKSDVYSLGVVFLELLT-GMQPISHGKN--IVREVNIAYQSSMMFSVIDGNMGSYPSE 850
T KSDV+S G++ +E++T G P N ++R + Y+ P
Sbjct: 346 FTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPR------------PEN 393
Query: 851 CVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTP 895
C E+ + ++C ++ + RP+ + L+ + + P
Sbjct: 394 CPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTATESQXQQQP 438
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 123/278 (44%), Gaps = 32/278 (11%)
Query: 617 IGQGGYGKVYKGILP----DGTVVAVKRAQEGSLQGEK-EFLTEIQFLSRLHHRNLVSLV 671
IG G +G+V G L VA+K + G + ++ +FL+E + + H N++ L
Sbjct: 15 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLE 74
Query: 672 GYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPV 731
G + M++ EFM NG+L D ++ + + G + G+ YL AD
Sbjct: 75 GVVTKSTPVMIITEFMENGSL-DSFLRQNDGQFTVIQLVGMLRGIAAGMKYL---ADMNY 130
Query: 732 FHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTP-GYLDPEYFL 790
HR + A NIL++ KV+DFGLSR + + P + S + P + PE
Sbjct: 131 VHRALAARNILVNSNLVCKVSDFGLSRFL---EDDTSDPTYTSALGGKIPIRWTAPEAIQ 187
Query: 791 THKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSY-- 847
K T SDV+S G+V E+++ G +P Y VI+ Y
Sbjct: 188 YRKFTSASDVWSYGIVMWEVMSYGERP--------------YWDMTNQDVINAIEQDYRL 233
Query: 848 --PSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883
P +C +L L C Q + + RP +++ L+ +
Sbjct: 234 PPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKM 271
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 132/293 (45%), Gaps = 45/293 (15%)
Query: 617 IGQGGYGKVYK----GILPDG----TVVAVKRAQEGSLQGE-KEFLTEIQFLSRL-HHRN 666
+G+G +G+V G+ D T VAVK + + + + + ++E++ + + H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 667 LVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMR--------------LSI 712
+++L+G C ++G ++ E+ S G LR+ L A+ L F+ +S
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSC 155
Query: 713 ALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAH 772
A +RG+ YL A HRD+ A N+L+ K+ADFGL+R DI I
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR-----DIHHIDXXK 207
Query: 773 VSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAY 831
+T + ++ PE T +SDV+S GV+ E+ T G P
Sbjct: 208 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYP-----------GV 256
Query: 832 QSSMMFSVI-DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883
+F ++ +G+ PS C + + C RP+ +++ +L+ I
Sbjct: 257 PVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 309
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 126/299 (42%), Gaps = 42/299 (14%)
Query: 599 FTYGEMALATNNFNSSTQIGQGGYGKVYKGILPD------GTVVAVKRAQE-GSLQGEKE 651
F E ++ ++GQG +G VY+G D T VAVK E SL+ E
Sbjct: 7 FVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE 66
Query: 652 FLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKE--------P 703
FL E + ++V L+G + ++V E M++G L+ L + E P
Sbjct: 67 FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPP 126
Query: 704 LGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 763
+ +A + G+ YL+ + HRD+ A N ++ H FT K+ DFG++R
Sbjct: 127 PTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIYET 183
Query: 764 DI-----EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPIS 818
D +G++P ++ PE T SD++S GVV E+ + +
Sbjct: 184 DYYRKGGKGLLPVR----------WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPY 233
Query: 819 HGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVM 877
G ++ + + F V+DG P C E+ L C Q RP+ E++
Sbjct: 234 QG--------LSNEQVLKF-VMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIV 283
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 133/293 (45%), Gaps = 45/293 (15%)
Query: 617 IGQGGYGKVYK----GILPD----GTVVAVKRAQEGSLQGE-KEFLTEIQFLSRL-HHRN 666
+G+G +G+V GI D VAVK ++ + + + + ++E++ + + H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 667 LVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKS--------------KEPLGFAMRLSI 712
+++L+G C ++G ++ E+ S G LR+ L A+ +E + F +S
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSC 162
Query: 713 ALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAH 772
+RG+ YL ++ HRD+ A N+L+ K+ADFGL+R DI I
Sbjct: 163 TYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMKIADFGLAR-----DINNIDXXK 214
Query: 773 VSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAY 831
+T + ++ PE T +SDV+S GV+ E+ T G P
Sbjct: 215 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP-----------GI 263
Query: 832 QSSMMFSVI-DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883
+F ++ +G+ P+ C + + C RP+ +++ +L+ I
Sbjct: 264 PVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 116/258 (44%), Gaps = 22/258 (8%)
Query: 616 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD 675
++G G +G V G VA+K +EGS+ E EF+ E + + L H LV L G C
Sbjct: 16 ELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCT 74
Query: 676 EEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRD 735
++ ++ E+M+NG L + L + + L + + YL ++ HRD
Sbjct: 75 KQRPIFIITEYMANGCLLNYLR-EMRHRFQTQQLLEMCKDVCEAMEYLESKQ---FLHRD 130
Query: 736 IKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLT 795
+ A N L++ + KV+DFGLSR V D E V+ +P PE + K +
Sbjct: 131 LAARNCLVNDQGVVKVSDFGLSRY--VLDDEYTSSVGSKFPVRWSP----PEVLMYSKFS 184
Query: 796 DKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEK 854
KSD+++ GV+ E+ + G P N +IA Q ++ P EK
Sbjct: 185 SKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIA-QGLRLYR---------PHLASEK 234
Query: 855 FIKLALKCCQDETDARPS 872
+ C ++ D RP+
Sbjct: 235 VYTIMYSCWHEKADERPT 252
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 128/303 (42%), Gaps = 42/303 (13%)
Query: 599 FTYGEMALATNNFNSSTQIGQGGYGKVYKGILPD------GTVVAVKRAQE-GSLQGEKE 651
F E ++ ++GQG +G VY+G D T VAVK E SL+ E
Sbjct: 7 FVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE 66
Query: 652 FLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKE--------P 703
FL E + ++V L+G + ++V E M++G L+ L + E P
Sbjct: 67 FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPP 126
Query: 704 LGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 763
+ +A + G+ YL+ + HRD+ A N ++ H FT K+ DFG++R
Sbjct: 127 PTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTR----- 178
Query: 764 DIEGIVPAHVSTVVKGTPG-----YLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPIS 818
DI + KG G ++ PE T SD++S GVV E+ + +
Sbjct: 179 DI-----YETAYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPY 233
Query: 819 HGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMR 878
G ++ + + F V+DG P C E+ L C Q RP+ E++
Sbjct: 234 QG--------LSNEQVLKF-VMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVN 284
Query: 879 ELE 881
L+
Sbjct: 285 LLK 287
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 133/293 (45%), Gaps = 45/293 (15%)
Query: 617 IGQGGYGKVYK----GILPD----GTVVAVKRAQEGSLQGE-KEFLTEIQFLSRL-HHRN 666
+G+G +G+V GI D VAVK ++ + + + + ++E++ + + H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 667 LVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKS--------------KEPLGFAMRLSI 712
+++L+G C ++G ++ E+ S G LR+ L A+ +E + F +S
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 713 ALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAH 772
+RG+ YL ++ HRD+ A N+L+ K+ADFGL+R DI I
Sbjct: 163 TYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMKIADFGLAR-----DINNIDXXK 214
Query: 773 VSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAY 831
+T + ++ PE T +SDV+S GV+ E+ T G P
Sbjct: 215 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP-----------GI 263
Query: 832 QSSMMFSVI-DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883
+F ++ +G+ P+ C + + C RP+ +++ +L+ I
Sbjct: 264 PVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 116/258 (44%), Gaps = 22/258 (8%)
Query: 616 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD 675
++G G +G V G VA+K +EGS+ E EF+ E + + L H LV L G C
Sbjct: 15 ELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCT 73
Query: 676 EEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRD 735
++ ++ E+M+NG L + L + + L + + YL ++ HRD
Sbjct: 74 KQRPIFIITEYMANGCLLNYLR-EMRHRFQTQQLLEMCKDVCEAMEYLESKQ---FLHRD 129
Query: 736 IKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLT 795
+ A N L++ + KV+DFGLSR V D E V+ +P PE + K +
Sbjct: 130 LAARNCLVNDQGVVKVSDFGLSRY--VLDDEYTSSVGSKFPVRWSP----PEVLMYSKFS 183
Query: 796 DKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEK 854
KSD+++ GV+ E+ + G P N +IA Q ++ P EK
Sbjct: 184 SKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIA-QGLRLYR---------PHLASEK 233
Query: 855 FIKLALKCCQDETDARPS 872
+ C ++ D RP+
Sbjct: 234 VYTIMYSCWHEKADERPT 251
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 130/294 (44%), Gaps = 29/294 (9%)
Query: 597 RSFTYGEMALATNNFNSSTQIGQGGYGKVYKGIL----PDGTVVAVKRAQEGSLQGEK-E 651
RSFT + + + IG G G+V G L VA+K + G + ++ +
Sbjct: 40 RSFT---REIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRD 96
Query: 652 FLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLS 711
FL+E + + H N++ L G M+V E+M NG+L L + +
Sbjct: 97 FLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQ-FTIMQLVG 155
Query: 712 IALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSR-LAPVPDIEGIVP 770
+ G G+ YL +D HRD+ A N+L+D KV+DFGLSR L PD
Sbjct: 156 MLRGVGAGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPD-----A 207
Query: 771 AHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNI 829
A+ +T K + PE + SDV+S GVV E+L G +P + N R+V
Sbjct: 208 AYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTN--RDV-- 263
Query: 830 AYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883
+ SV +G P C +L L C + RP S+++ L+++
Sbjct: 264 ------ISSVEEGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDAL 311
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 124/274 (45%), Gaps = 26/274 (9%)
Query: 617 IGQGGYGKVYKGILP----DGTVVAVKRAQEG-SLQGEKEFLTEIQFLSRLHHRNLVSLV 671
IG G +G+V G L VA+K + G + + ++FL+E + + H N++ L
Sbjct: 37 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 96
Query: 672 GYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPV 731
G + M++ E+M NG+L D K+ + + G G+ YL +D
Sbjct: 97 GVVTKCKPVMIITEYMENGSL-DAFLRKNDGRFTVIQLVGMLRGIGSGMKYL---SDMSA 152
Query: 732 FHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTP-GYLDPEYFL 790
HRD+ A NIL++ KV+DFG+SR+ +E A +T P + PE
Sbjct: 153 VHRDLAARNILVNSNLVCKVSDFGMSRV-----LEDDPEAAYTTRGGKIPIRWTAPEAIA 207
Query: 791 THKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPS 849
K T SDV+S G+V E+++ G +P N ++ ++ +G P
Sbjct: 208 YRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN----------QDVIKAIEEGYRLPPPM 257
Query: 850 ECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883
+C +L L C Q E RP +++ L+ +
Sbjct: 258 DCPIALHQLMLDCWQKERSDRPKFGQIVNMLDKL 291
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 114/258 (44%), Gaps = 22/258 (8%)
Query: 616 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD 675
++G G +G V G VA+K +EGS+ E EF+ E + + L H LV L G C
Sbjct: 11 ELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCT 69
Query: 676 EEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRD 735
++ ++ E+M+NG L + L + + L + + YL ++ HRD
Sbjct: 70 KQRPIFIITEYMANGCLLNYLR-EMRHRFQTQQLLEMCKDVCEAMEYLESKQ---FLHRD 125
Query: 736 IKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLT 795
+ A N L++ + KV+DFGLSR V D E V+ +P PE + K +
Sbjct: 126 LAARNCLVNDQGVVKVSDFGLSRY--VLDDEYTSSVGSKFPVRWSP----PEVLMYSKFS 179
Query: 796 DKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEK 854
KSD+++ GV+ E+ + G P N +IA G P EK
Sbjct: 180 SKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIA----------QGLRLYRPHLASEK 229
Query: 855 FIKLALKCCQDETDARPS 872
+ C ++ D RP+
Sbjct: 230 VYTIMYSCWHEKADERPT 247
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 123/283 (43%), Gaps = 32/283 (11%)
Query: 605 ALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHH 664
AL IG+G +G V G G VAVK + + + FL E +++L H
Sbjct: 8 ALNMKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDATA--QAFLAEASVMTQLRH 64
Query: 665 RNLVSLVGY-CDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYL 723
NLV L+G +E+G +V E+M+ G+L D L ++ + LG L +L + YL
Sbjct: 65 SNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL 124
Query: 724 HTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGY 783
HRD+ A N+L+ AKV+DFGL++ A G +P VK T
Sbjct: 125 EGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLP------VKWTA-- 173
Query: 784 LDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISH--GKNIVREVNIAYQSSMMFSVI 840
PE + KSDV+S G++ E+ + G P K++V V Y+
Sbjct: 174 --PEALREAAFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDA----- 226
Query: 841 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883
P C ++ C + RPS ++ +LE I
Sbjct: 227 -------PDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHI 262
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 116/258 (44%), Gaps = 22/258 (8%)
Query: 616 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD 675
++G G +G V G VA+K +EGS+ E EF+ E + + L H LV L G C
Sbjct: 16 ELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCT 74
Query: 676 EEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRD 735
++ ++ E+M+NG L + L + + L + + YL ++ HRD
Sbjct: 75 KQRPIFIITEYMANGCLLNYLR-EMRHRFQTQQLLEMCKDVCEAMEYLESKQ---FLHRD 130
Query: 736 IKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLT 795
+ A N L++ + KV+DFGLSR V D E V+ +P PE + K +
Sbjct: 131 LAARNCLVNDQGVVKVSDFGLSRY--VLDDEYTSSRGSKFPVRWSP----PEVLMYSKFS 184
Query: 796 DKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEK 854
KSD+++ GV+ E+ + G P N +IA Q ++ P EK
Sbjct: 185 SKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIA-QGLRLYR---------PHLASEK 234
Query: 855 FIKLALKCCQDETDARPS 872
+ C ++ D RP+
Sbjct: 235 VYTIMYSCWHEKADERPT 252
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 127/299 (42%), Gaps = 42/299 (14%)
Query: 617 IGQGGYGKVYKGIL------PDGTVVAVKRAQE-GSLQGEKEFLTEIQFLSRLHHRNLVS 669
+G G +G+VY+G + P VAVK E S Q E +FL E +S+L+H+N+V
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 670 LVGYCDEEGEQMLVYEFMSNGTLRDQLSA---KSKEPLGFAM--RLSIALGSSRGILYLH 724
+G + + ++ E M+ G L+ L + +P AM L +A + G YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 725 TEADPPVFHRDIKASNILLDHK---FTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTP 781
HRDI A N LL AK+ DFG++R DI
Sbjct: 159 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR-----DIYRASYYRKGGCAMLPV 210
Query: 782 GYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVI 840
++ PE F+ T K+D +S GV+ E+ + G P N Q + F
Sbjct: 211 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN---------QEVLEFVTS 261
Query: 841 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFIN 899
G M P C ++ +C Q + + RP+ + ++ +E T+ P+ IN
Sbjct: 262 GGRMDP-PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYC--------TQDPDVIN 311
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 87.8 bits (216), Expect = 2e-17, Method: Composition-based stats.
Identities = 82/284 (28%), Positives = 131/284 (46%), Gaps = 34/284 (11%)
Query: 612 NSSTQIGQGGYGKVYKGILPDGT-------VVAVKRAQEGSLQGEKEFLTEIQFLSRLHH 664
+S IG+G +G VY G D + ++ R E +Q + FL E + L+H
Sbjct: 24 HSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITE--MQQVEAFLREGLLMRGLNH 81
Query: 665 RNLVSLVG-YCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYL 723
N+++L+G EG ++ +M +G L + + + P + +S L +RG+ YL
Sbjct: 82 PNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDL-ISFGLQVARGMEYL 140
Query: 724 HTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPA---HVSTVVKGT 780
A+ HRD+ A N +LD FT KVADFGL+R + D E H VK T
Sbjct: 141 ---AEQKFVHRDLAARNCMLDESFTVKVADFGLAR--DILDREYYSVQQHRHARLPVKWT 195
Query: 781 PGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSV 839
E T++ T KSDV+S GV+ ELLT G P H + ++ + +
Sbjct: 196 A----LESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRH----IDPFDLTH------FL 241
Query: 840 IDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883
G P C + ++ +C + + RP+ ++ E+E I
Sbjct: 242 AQGRRLPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQI 285
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 85/283 (30%), Positives = 127/283 (44%), Gaps = 23/283 (8%)
Query: 609 NNFNSSTQIGQGGYGKVYKG-ILPDGTVVAVKRAQ-EGSLQGEKEFLTEIQFLSRLHHRN 666
+++ IG G V P VA+KR E E L EIQ +S+ HH N
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 74
Query: 667 LVSLVGYCDEEGEQMLVYEFMSNGTLRD---QLSAKSKEPLGFAMRLSIAL---GSSRGI 720
+VS + E LV + +S G++ D + AK + G +IA G+
Sbjct: 75 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 134
Query: 721 LYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSR-LAPVPDIEGIVPAHVSTVVKG 779
YLH HRD+KA NILL + ++ADFG+S LA D I V G
Sbjct: 135 EYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGD---ITRNKVRKTFVG 188
Query: 780 TPGYLDPEYFLTHKLTD-KSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQS---SM 835
TP ++ PE + D K+D++S G+ +EL TG P H ++ + + Q+ S+
Sbjct: 189 TPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPY-HKYPPMKVLMLTLQNDPPSL 247
Query: 836 MFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMR 878
V D M + K I L C Q + + RP+ +E++R
Sbjct: 248 ETGVQDKEMLKKYGKSFRKMISL---CLQKDPEKRPTAAELLR 287
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 122/282 (43%), Gaps = 42/282 (14%)
Query: 616 QIGQGGYGKVYKGILPD------GTVVAVKRAQE-GSLQGEKEFLTEIQFLSRLHHRNLV 668
++GQG +G VY+G D T VAVK E SL+ EFL E + ++V
Sbjct: 23 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 82
Query: 669 SLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKE--------PLGFAMRLSIALGSSRGI 720
L+G + ++V E M++G L+ L + E P + +A + G+
Sbjct: 83 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 142
Query: 721 LYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI-----EGIVPAHVST 775
YL+ + HRD+ A N ++ H FT K+ DFG++R D +G++P
Sbjct: 143 AYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR--- 196
Query: 776 VVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSM 835
++ PE T SD++S GVV E+ + + G ++ + +
Sbjct: 197 -------WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQG--------LSNEQVL 241
Query: 836 MFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVM 877
F V+DG P C E+ L C Q RP+ E++
Sbjct: 242 KF-VMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIV 282
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 127/299 (42%), Gaps = 42/299 (14%)
Query: 617 IGQGGYGKVYKGIL------PDGTVVAVKRAQE-GSLQGEKEFLTEIQFLSRLHHRNLVS 669
+G G +G+VY+G + P VAVK E S Q E +FL E +S+L+H+N+V
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 670 LVGYCDEEGEQMLVYEFMSNGTLRDQLSA---KSKEPLGFAM--RLSIALGSSRGILYLH 724
+G + + ++ E M+ G L+ L + +P AM L +A + G YL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 725 TEADPPVFHRDIKASNILLDHK---FTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTP 781
HRDI A N LL AK+ DFG++R DI
Sbjct: 173 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR-----DIYRASYYRKGGCAMLPV 224
Query: 782 GYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVI 840
++ PE F+ T K+D +S GV+ E+ + G P N Q + F
Sbjct: 225 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN---------QEVLEFVTS 275
Query: 841 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFIN 899
G M P C ++ +C Q + + RP+ + ++ +E T+ P+ IN
Sbjct: 276 GGRMDP-PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYC--------TQDPDVIN 325
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/333 (23%), Positives = 145/333 (43%), Gaps = 48/333 (14%)
Query: 580 ISRRRHSSKTSIKIDGVRSFTYGE---MALATNNFNSSTQIGQGGYGKVYK----GILPD 632
I+ R S+ + + GV + E + +G+G +G+V GI D
Sbjct: 49 ITTRLSSTADTPMLAGVSEYELPEDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKD 108
Query: 633 ----GTVVAVKRAQEGSLQGE-KEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLVYEF 686
VAVK ++ + + + + ++E++ + + H+N+++L+G C ++G ++ E+
Sbjct: 109 KPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEY 168
Query: 687 MSNGTLRDQLSAKS--------------KEPLGFAMRLSIALGSSRGILYLHTEADPPVF 732
S G LR+ L A+ +E + F +S +RG+ YL ++
Sbjct: 169 ASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CI 225
Query: 733 HRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH 792
HRD+ A N+L+ K+ADFGL+R DI I +T + ++ PE
Sbjct: 226 HRDLAARNVLVTENNVMKIADFGLAR-----DINNIDYYKKTTNGRLPVKWMAPEALFDR 280
Query: 793 KLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVI-DGNMGSYPSE 850
T +SDV+S GV+ E+ T G P +F ++ +G+ P+
Sbjct: 281 VYTHQSDVWSFGVLMWEIFTLGGSPYP-----------GIPVEELFKLLKEGHRMDKPAN 329
Query: 851 CVEKFIKLALKCCQDETDARPSMSEVMRELESI 883
C + + C RP+ +++ +L+ I
Sbjct: 330 CTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 362
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 85/283 (30%), Positives = 127/283 (44%), Gaps = 23/283 (8%)
Query: 609 NNFNSSTQIGQGGYGKVYKG-ILPDGTVVAVKRAQ-EGSLQGEKEFLTEIQFLSRLHHRN 666
+++ IG G V P VA+KR E E L EIQ +S+ HH N
Sbjct: 10 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 69
Query: 667 LVSLVGYCDEEGEQMLVYEFMSNGTLRD---QLSAKSKEPLGFAMRLSIAL---GSSRGI 720
+VS + E LV + +S G++ D + AK + G +IA G+
Sbjct: 70 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 129
Query: 721 LYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSR-LAPVPDIEGIVPAHVSTVVKG 779
YLH HRD+KA NILL + ++ADFG+S LA D I V G
Sbjct: 130 EYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGD---ITRNKVRKTFVG 183
Query: 780 TPGYLDPEYFLTHKLTD-KSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQS---SM 835
TP ++ PE + D K+D++S G+ +EL TG P H ++ + + Q+ S+
Sbjct: 184 TPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPY-HKYPPMKVLMLTLQNDPPSL 242
Query: 836 MFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMR 878
V D M + K I L C Q + + RP+ +E++R
Sbjct: 243 ETGVQDKEMLKKYGKSFRKMISL---CLQKDPEKRPTAAELLR 282
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 125/286 (43%), Gaps = 42/286 (14%)
Query: 616 QIGQGGYGKVYKGILPD------GTVVAVKRAQE-GSLQGEKEFLTEIQFLSRLHHRNLV 668
++GQG +G VY+G D T VAVK E SL+ EFL E + ++V
Sbjct: 25 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 84
Query: 669 SLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKE--------PLGFAMRLSIALGSSRGI 720
L+G + ++V E M++G L+ L + E P + +A + G+
Sbjct: 85 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 144
Query: 721 LYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI-----EGIVPAHVST 775
YL+ + HR++ A N ++ H FT K+ DFG++R D +G++P
Sbjct: 145 AYLNAKK---FVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR--- 198
Query: 776 VVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSM 835
++ PE T SD++S GVV E+ + + G ++ + +
Sbjct: 199 -------WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQG--------LSNEQVL 243
Query: 836 MFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELE 881
F V+DG P C E+ L C Q + RP+ E++ L+
Sbjct: 244 KF-VMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLK 288
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 125/286 (43%), Gaps = 42/286 (14%)
Query: 616 QIGQGGYGKVYKGILPD------GTVVAVKRAQE-GSLQGEKEFLTEIQFLSRLHHRNLV 668
++GQG +G VY+G D T VAVK E SL+ EFL E + ++V
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 669 SLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKE--------PLGFAMRLSIALGSSRGI 720
L+G + ++V E M++G L+ L + E P + +A + G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 721 LYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI-----EGIVPAHVST 775
YL+ + HR++ A N ++ H FT K+ DFG++R D +G++P
Sbjct: 144 AYLNAKK---FVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR--- 197
Query: 776 VVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSM 835
++ PE T SD++S GVV E+ + + G ++ + +
Sbjct: 198 -------WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQG--------LSNEQVL 242
Query: 836 MFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELE 881
F V+DG P C E+ L C Q + RP+ E++ L+
Sbjct: 243 KF-VMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLK 287
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 133/293 (45%), Gaps = 45/293 (15%)
Query: 617 IGQGGYGKVYK----GILPD----GTVVAVKRAQEGSLQGE-KEFLTEIQFLSRL-HHRN 666
+G+G +G+V GI D VAVK ++ + + + + ++E++ + + H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 667 LVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKS--------------KEPLGFAMRLSI 712
+++L+G C ++G ++ E+ S G LR+ L A+ +E + F +S
Sbjct: 103 IITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 713 ALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAH 772
+RG+ YL ++ HRD+ A N+L+ K+ADFGL+R DI I
Sbjct: 163 TYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMKIADFGLAR-----DINNIDYYK 214
Query: 773 VSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAY 831
+T + ++ PE T +SDV+S GV+ E+ T G P
Sbjct: 215 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP-----------GI 263
Query: 832 QSSMMFSVI-DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883
+F ++ +G+ P+ C + + C RP+ +++ +L+ I
Sbjct: 264 PVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 135/312 (43%), Gaps = 54/312 (17%)
Query: 606 LATNNFNSSTQIGQGGYGKVYKG-ILPDGTVV--AVKRAQE-GSLQGEKEFLTEIQFLSR 661
L N+ IG+G +G+V K I DG + A+KR +E S ++F E++ L +
Sbjct: 12 LDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCK 71
Query: 662 L-HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRD--------------QLSAKSKEPLGF 706
L HH N+++L+G C+ G L E+ +G L D ++ + L
Sbjct: 72 LGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSS 131
Query: 707 AMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 766
L A +RG+ YL + HRD+ A NIL+ + AK+ADFGLSR V
Sbjct: 132 QQLLHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEV---- 184
Query: 767 GIVPAHVSTVVKGTPGYLDPEYFLTHKL-----TDKSDVYSLGVVFLELLT-GMQPISHG 820
VK T G L + L T SDV+S GV+ E+++ G P G
Sbjct: 185 ---------YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYC-G 234
Query: 821 KNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMREL 880
+ + + G P C ++ L +C +++ RPS +++ L
Sbjct: 235 MTC---------AELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQI---L 282
Query: 881 ESIWNMMPESDT 892
S+ M+ E T
Sbjct: 283 VSLNRMLEERKT 294
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 124/274 (45%), Gaps = 26/274 (9%)
Query: 617 IGQGGYGKVYKGILP----DGTVVAVKRAQEG-SLQGEKEFLTEIQFLSRLHHRNLVSLV 671
IG G +G+V G L VA+K + G + + ++FL+E + + H N++ L
Sbjct: 22 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 81
Query: 672 GYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPV 731
G + M++ E+M NG+L D K+ + + G G+ YL +D
Sbjct: 82 GVVTKCKPVMIITEYMENGSL-DAFLRKNDGRFTVIQLVGMLRGIGSGMKYL---SDMSY 137
Query: 732 FHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTP-GYLDPEYFL 790
HRD+ A NIL++ KV+DFG+SR+ +E A +T P + PE
Sbjct: 138 VHRDLAARNILVNSNLVCKVSDFGMSRV-----LEDDPEAAYTTRGGKIPIRWTAPEAIA 192
Query: 791 THKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPS 849
K T SDV+S G+V E+++ G +P N ++ ++ +G P
Sbjct: 193 YRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN----------QDVIKAIEEGYRLPPPM 242
Query: 850 ECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883
+C +L L C Q E RP +++ L+ +
Sbjct: 243 DCPIALHQLMLDCWQKERSDRPKFGQIVNMLDKL 276
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 87.4 bits (215), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 124/274 (45%), Gaps = 26/274 (9%)
Query: 617 IGQGGYGKVYKGILP----DGTVVAVKRAQEG-SLQGEKEFLTEIQFLSRLHHRNLVSLV 671
IG G +G+V G L VA+K + G + + ++FL+E + + H N++ L
Sbjct: 16 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 75
Query: 672 GYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPV 731
G + M++ E+M NG+L D K+ + + G G+ YL +D
Sbjct: 76 GVVTKCKPVMIITEYMENGSL-DAFLRKNDGRFTVIQLVGMLRGIGSGMKYL---SDMSY 131
Query: 732 FHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTP-GYLDPEYFL 790
HRD+ A NIL++ KV+DFG+SR+ +E A +T P + PE
Sbjct: 132 VHRDLAARNILVNSNLVCKVSDFGMSRV-----LEDDPEAAYTTRGGKIPIRWTAPEAIA 186
Query: 791 THKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPS 849
K T SDV+S G+V E+++ G +P N ++ ++ +G P
Sbjct: 187 YRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN----------QDVIKAIEEGYRLPPPM 236
Query: 850 ECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883
+C +L L C Q E RP +++ L+ +
Sbjct: 237 DCPIALHQLMLDCWQKERSDRPKFGQIVNMLDKL 270
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 87.4 bits (215), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 133/293 (45%), Gaps = 45/293 (15%)
Query: 617 IGQGGYGKVYK----GILPD----GTVVAVKRAQEGSLQGE-KEFLTEIQFLSRL-HHRN 666
+G+G +G+V GI D VAVK ++ + + + + ++E++ + + H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 667 LVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKS--------------KEPLGFAMRLSI 712
+++L+G C ++G ++ E+ S G LR+ L A+ +E + F +S
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 713 ALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAH 772
+RG+ YL ++ HRD+ A N+L+ K+ADFGL+R DI I
Sbjct: 163 TYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMKIADFGLAR-----DINNIDYYK 214
Query: 773 VSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAY 831
+T + ++ PE T +SDV+S GV+ E+ T G P
Sbjct: 215 NTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP-----------GI 263
Query: 832 QSSMMFSVI-DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883
+F ++ +G+ P+ C + + C RP+ +++ +L+ I
Sbjct: 264 PVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 87.4 bits (215), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 133/293 (45%), Gaps = 45/293 (15%)
Query: 617 IGQGGYGKVYK----GILPD----GTVVAVKRAQEGSLQGE-KEFLTEIQFLSRL-HHRN 666
+G+G +G+V GI D VAVK ++ + + + + ++E++ + + H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 667 LVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKS--------------KEPLGFAMRLSI 712
+++L+G C ++G ++ E+ S G LR+ L A+ +E + F +S
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 713 ALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAH 772
+RG+ YL ++ HRD+ A N+L+ K+ADFGL+R DI I
Sbjct: 163 TYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMKIADFGLAR-----DINNIDYYK 214
Query: 773 VSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAY 831
+T + ++ PE T +SDV+S GV+ E+ T G P
Sbjct: 215 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP-----------GI 263
Query: 832 QSSMMFSVI-DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883
+F ++ +G+ P+ C + + C RP+ +++ +L+ I
Sbjct: 264 PVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 87.0 bits (214), Expect = 4e-17, Method: Composition-based stats.
Identities = 82/281 (29%), Positives = 127/281 (45%), Gaps = 25/281 (8%)
Query: 617 IGQGGYGKVY---KGILPDGT--VVAVK--RAQEGSLQGEKEFLTEIQFLSRLHHRNLVS 669
+G+G +GKV DGT +VAVK +A G Q + EI L L+H +++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGP-QHRSGWKQEIDILRTLYHEHIIK 80
Query: 670 LVGYCDEEGEQ--MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEA 727
G C+++GE+ LV E++ G+LRD L S +G A L A G+ YLH++
Sbjct: 81 YKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHS---IGLAQLLLFAQQICEGMAYLHSQH 137
Query: 728 DPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPE 787
HR++ A N+LLD+ K+ DFGL++ P EG V + PE
Sbjct: 138 ---YIHRNLAARNVLLDNDRLVKIGDFGLAKAVP----EGHEYYRVREDGDSPVFWYAPE 190
Query: 788 YFLTHKLTDKSDVYSLGVVFLELLTGMQPI-SHGKNIVREVNIAYQSSMMFSVID----G 842
+K SDV+S GV ELLT S + + IA + + + G
Sbjct: 191 CLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERG 250
Query: 843 NMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883
P +C + L C + E RP+ ++ L+++
Sbjct: 251 ERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPILKTV 291
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 135/312 (43%), Gaps = 54/312 (17%)
Query: 606 LATNNFNSSTQIGQGGYGKVYKG-ILPDGTVV--AVKRAQE-GSLQGEKEFLTEIQFLSR 661
L N+ IG+G +G+V K I DG + A+KR +E S ++F E++ L +
Sbjct: 22 LDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCK 81
Query: 662 L-HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRD--------------QLSAKSKEPLGF 706
L HH N+++L+G C+ G L E+ +G L D ++ + L
Sbjct: 82 LGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSS 141
Query: 707 AMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 766
L A +RG+ YL + HRD+ A NIL+ + AK+ADFGLSR V
Sbjct: 142 QQLLHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEV---- 194
Query: 767 GIVPAHVSTVVKGTPGYLDPEYFLTHKL-----TDKSDVYSLGVVFLELLT-GMQPISHG 820
VK T G L + L T SDV+S GV+ E+++ G P G
Sbjct: 195 ---------YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYC-G 244
Query: 821 KNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMREL 880
+ + + G P C ++ L +C +++ RPS +++ L
Sbjct: 245 MTC---------AELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQI---L 292
Query: 881 ESIWNMMPESDT 892
S+ M+ E T
Sbjct: 293 VSLNRMLEERKT 304
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 133/298 (44%), Gaps = 55/298 (18%)
Query: 617 IGQGGYGKVYK----GILPDG----TVVAVKRAQEGSLQGE-KEFLTEIQFLSRL-HHRN 666
+G+G +G+V G+ D T VAVK + + + + + ++E++ + + H+N
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 667 LVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKS--------------KEPLGFAMRLSI 712
+++L+G C ++G ++ E+ S G LR+ L A+ +E L +S
Sbjct: 137 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 196
Query: 713 ALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAH 772
A +RG+ YL A HRD+ A N+L+ K+ADFGL+R DI H
Sbjct: 197 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR-----DIH-----H 243
Query: 773 VSTVVKGTPG-----YLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVRE 826
+ K T G ++ PE T +SDV+S GV+ E+ T G P
Sbjct: 244 IDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYP-------- 295
Query: 827 VNIAYQSSMMFSVI-DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883
+F ++ +G+ PS C + + C RP+ +++ +L+ I
Sbjct: 296 ---GVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 350
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 133/298 (44%), Gaps = 55/298 (18%)
Query: 617 IGQGGYGKVYK----GILPDG----TVVAVKRAQEGSLQGE-KEFLTEIQFLSRL-HHRN 666
+G+G +G+V G+ D T VAVK + + + + + ++E++ + + H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 667 LVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKS--------------KEPLGFAMRLSI 712
+++L+G C ++G ++ E+ S G LR+ L A+ +E L +S
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 713 ALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAH 772
A +RG+ YL A HRD+ A N+L+ K+ADFGL+R DI H
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR-----DIH-----H 202
Query: 773 VSTVVKGTPG-----YLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVRE 826
+ K T G ++ PE T +SDV+S GV+ E+ T G P
Sbjct: 203 IDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYP-------- 254
Query: 827 VNIAYQSSMMFSVI-DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883
+F ++ +G+ PS C + + C RP+ +++ +L+ I
Sbjct: 255 ---GVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 309
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 133/298 (44%), Gaps = 55/298 (18%)
Query: 617 IGQGGYGKVYK----GILPDG----TVVAVKRAQEGSLQGE-KEFLTEIQFLSRL-HHRN 666
+G+G +G+V G+ D T VAVK + + + + + ++E++ + + H+N
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 667 LVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKS--------------KEPLGFAMRLSI 712
+++L+G C ++G ++ E+ S G LR+ L A+ +E L +S
Sbjct: 81 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 140
Query: 713 ALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAH 772
A +RG+ YL A HRD+ A N+L+ K+ADFGL+R DI H
Sbjct: 141 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR-----DIH-----H 187
Query: 773 VSTVVKGTPG-----YLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVRE 826
+ K T G ++ PE T +SDV+S GV+ E+ T G P
Sbjct: 188 IDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYP-------- 239
Query: 827 VNIAYQSSMMFSVI-DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883
+F ++ +G+ PS C + + C RP+ +++ +L+ I
Sbjct: 240 ---GVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 294
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 129/294 (43%), Gaps = 29/294 (9%)
Query: 597 RSFTYGEMALATNNFNSSTQIGQGGYGKVYKGIL----PDGTVVAVKRAQEGSLQGEK-E 651
RSFT + + + IG G G+V G L VA+K + G + ++ +
Sbjct: 40 RSFT---REIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRD 96
Query: 652 FLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLS 711
FL+E + + H N++ L G M+V E+M NG+L L + +
Sbjct: 97 FLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQ-FTIMQLVG 155
Query: 712 IALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSR-LAPVPDIEGIVP 770
+ G G+ YL +D HRD+ A N+L+D KV+DFGLSR L PD
Sbjct: 156 MLRGVGAGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPD-----A 207
Query: 771 AHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNI 829
A +T K + PE + SDV+S GVV E+L G +P + N R+V
Sbjct: 208 AXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTN--RDV-- 263
Query: 830 AYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883
+ SV +G P C +L L C + RP S+++ L+++
Sbjct: 264 ------ISSVEEGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDAL 311
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 133/298 (44%), Gaps = 55/298 (18%)
Query: 617 IGQGGYGKVYK----GILPDG----TVVAVKRAQEGSLQGE-KEFLTEIQFLSRL-HHRN 666
+G+G +G+V G+ D T VAVK + + + + + ++E++ + + H+N
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 667 LVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKS--------------KEPLGFAMRLSI 712
+++L+G C ++G ++ E+ S G LR+ L A+ +E L +S
Sbjct: 85 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 144
Query: 713 ALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAH 772
A +RG+ YL A HRD+ A N+L+ K+ADFGL+R DI H
Sbjct: 145 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR-----DIH-----H 191
Query: 773 VSTVVKGTPG-----YLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVRE 826
+ K T G ++ PE T +SDV+S GV+ E+ T G P
Sbjct: 192 IDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYP-------- 243
Query: 827 VNIAYQSSMMFSVI-DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883
+F ++ +G+ PS C + + C RP+ +++ +L+ I
Sbjct: 244 ---GVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 298
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 133/298 (44%), Gaps = 55/298 (18%)
Query: 617 IGQGGYGKVYK----GILPDG----TVVAVKRAQEGSLQGE-KEFLTEIQFLSRL-HHRN 666
+G+G +G+V G+ D T VAVK + + + + + ++E++ + + H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 667 LVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKS--------------KEPLGFAMRLSI 712
+++L+G C ++G ++ E+ S G LR+ L A+ +E L +S
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 713 ALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAH 772
A +RG+ YL A HRD+ A N+L+ K+ADFGL+R DI H
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR-----DIH-----H 202
Query: 773 VSTVVKGTPG-----YLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVRE 826
+ K T G ++ PE T +SDV+S GV+ E+ T G P
Sbjct: 203 IDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYP-------- 254
Query: 827 VNIAYQSSMMFSVI-DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883
+F ++ +G+ PS C + + C RP+ +++ +L+ I
Sbjct: 255 ---GVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 309
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 133/298 (44%), Gaps = 55/298 (18%)
Query: 617 IGQGGYGKVYK----GILPDG----TVVAVKRAQEGSLQGE-KEFLTEIQFLSRL-HHRN 666
+G+G +G+V G+ D T VAVK + + + + + ++E++ + + H+N
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 667 LVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKS--------------KEPLGFAMRLSI 712
+++L+G C ++G ++ E+ S G LR+ L A+ +E L +S
Sbjct: 89 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 148
Query: 713 ALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAH 772
A +RG+ YL A HRD+ A N+L+ K+ADFGL+R DI H
Sbjct: 149 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR-----DIH-----H 195
Query: 773 VSTVVKGTPG-----YLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVRE 826
+ K T G ++ PE T +SDV+S GV+ E+ T G P
Sbjct: 196 IDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYP-------- 247
Query: 827 VNIAYQSSMMFSVI-DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883
+F ++ +G+ PS C + + C RP+ +++ +L+ I
Sbjct: 248 ---GVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 302
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 87.0 bits (214), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 123/281 (43%), Gaps = 25/281 (8%)
Query: 617 IGQGGYGKVYKGILP---DGT--VVAVK--RAQEGSLQGEKEFLTEIQFLSRLHHRNLVS 669
+G+G +GKV DGT +VAVK +A G Q + EI L L+H +++
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGP-QHRSGWKQEIDILRTLYHEHIIK 97
Query: 670 LVGYCDEEGEQ--MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEA 727
G C++ G LV E++ G+LRD L S +G A L A G+ YLH +
Sbjct: 98 YKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHS---IGLAQLLLFAQQICEGMAYLHAQH 154
Query: 728 DPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPE 787
HRD+ A N+LLD+ K+ DFGL++ P EG V + PE
Sbjct: 155 ---YIHRDLAARNVLLDNDRLVKIGDFGLAKAVP----EGHEXYRVREDGDSPVFWYAPE 207
Query: 788 YFLTHKLTDKSDVYSLGVVFLELLTGMQ-PISHGKNIVREVNIAYQSSMMFSVID----G 842
+K SDV+S GV ELLT S + + IA + + + G
Sbjct: 208 CLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERG 267
Query: 843 NMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883
P +C + L C + E RP+ ++ L+++
Sbjct: 268 ERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTV 308
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 132/293 (45%), Gaps = 45/293 (15%)
Query: 617 IGQGGYGKVYK----GILPD----GTVVAVKRAQEGSLQGE-KEFLTEIQFLSRL-HHRN 666
+G+G +G+V GI D VAVK ++ + + + + ++E++ + + H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 667 LVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKS--------------KEPLGFAMRLSI 712
++ L+G C ++G ++ E+ S G LR+ L A+ +E + F +S
Sbjct: 103 IIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 713 ALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAH 772
+RG+ YL ++ HRD+ A N+L+ K+ADFGL+R DI I
Sbjct: 163 TYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMKIADFGLAR-----DINNIDYYK 214
Query: 773 VSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAY 831
+T + ++ PE T +SDV+S GV+ E+ T G P
Sbjct: 215 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP-----------GI 263
Query: 832 QSSMMFSVI-DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883
+F ++ +G+ P+ C + + C RP+ +++ +L+ I
Sbjct: 264 PVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 133/298 (44%), Gaps = 55/298 (18%)
Query: 617 IGQGGYGKVYK----GILPDG----TVVAVKRAQEGSLQGE-KEFLTEIQFLSRL-HHRN 666
+G+G +G+V G+ D T VAVK + + + + + ++E++ + + H+N
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 667 LVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKS--------------KEPLGFAMRLSI 712
+++L+G C ++G ++ E+ S G LR+ L A+ +E L +S
Sbjct: 88 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 147
Query: 713 ALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAH 772
A +RG+ YL A HRD+ A N+L+ K+ADFGL+R DI H
Sbjct: 148 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR-----DIH-----H 194
Query: 773 VSTVVKGTPG-----YLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVRE 826
+ K T G ++ PE T +SDV+S GV+ E+ T G P
Sbjct: 195 IDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYP-------- 246
Query: 827 VNIAYQSSMMFSVI-DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883
+F ++ +G+ PS C + + C RP+ +++ +L+ I
Sbjct: 247 ---GVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 301
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 133/293 (45%), Gaps = 45/293 (15%)
Query: 617 IGQGGYGKVYK----GILPD----GTVVAVKRAQEGSLQGE-KEFLTEIQFLSRL-HHRN 666
+G+G +G+V GI D VAVK ++ + + + + ++E++ + + H+N
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 667 LVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKS--------------KEPLGFAMRLSI 712
+++L+G C ++G ++ E+ S G LR+ L A+ +E + F +S
Sbjct: 90 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 149
Query: 713 ALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAH 772
+RG+ YL ++ HRD+ A N+L+ K+ADFGL+R DI I
Sbjct: 150 TYQLARGMEYLASQK---CIHRDLTARNVLVTENNVMKIADFGLAR-----DINNIDYYK 201
Query: 773 VSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAY 831
+T + ++ PE T +SDV+S GV+ E+ T G P
Sbjct: 202 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP-----------GI 250
Query: 832 QSSMMFSVI-DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883
+F ++ +G+ P+ C + + C RP+ +++ +L+ I
Sbjct: 251 PVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 303
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 126/299 (42%), Gaps = 42/299 (14%)
Query: 617 IGQGGYGKVYKGIL------PDGTVVAVKRAQE-GSLQGEKEFLTEIQFLSRLHHRNLVS 669
+G G +G+VY+G + P VAVK E S Q E +FL E +S+ +H+N+V
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 670 LVGYCDEEGEQMLVYEFMSNGTLRDQLSA---KSKEPLGFAM--RLSIALGSSRGILYLH 724
+G + + ++ E M+ G L+ L + +P AM L +A + G YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 725 TEADPPVFHRDIKASNILLDHK---FTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTP 781
HRDI A N LL AK+ DFG++R DI
Sbjct: 159 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR-----DIYRASYYRKGGCAMLPV 210
Query: 782 GYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVI 840
++ PE F+ T K+D +S GV+ E+ + G P N Q + F
Sbjct: 211 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN---------QEVLEFVTS 261
Query: 841 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFIN 899
G M P C ++ +C Q + + RP+ + ++ +E T+ P+ IN
Sbjct: 262 GGRMDP-PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYC--------TQDPDVIN 311
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 133/293 (45%), Gaps = 45/293 (15%)
Query: 617 IGQGGYGKVYK----GILPD----GTVVAVKRAQEGSLQGE-KEFLTEIQFLSRL-HHRN 666
+G+G +G+V GI D VAVK ++ + + + + ++E++ + + H+N
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 667 LVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKS--------------KEPLGFAMRLSI 712
+++L+G C ++G ++ E+ S G LR+ L A+ +E + F +S
Sbjct: 92 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 151
Query: 713 ALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAH 772
+RG+ YL ++ HRD+ A N+L+ K+ADFGL+R DI I
Sbjct: 152 TYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMKIADFGLAR-----DINNIDYYK 203
Query: 773 VSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAY 831
+T + ++ PE T +SDV+S GV+ E+ T G P
Sbjct: 204 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP-----------GI 252
Query: 832 QSSMMFSVI-DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883
+F ++ +G+ P+ C + + C RP+ +++ +L+ I
Sbjct: 253 PVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 305
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 126/282 (44%), Gaps = 27/282 (9%)
Query: 606 LATNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRA-----QEGSLQGEKEFLTEIQFL 659
L +G G +G VYKGI +P+G V + A + + EF+ E +
Sbjct: 12 LKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIM 71
Query: 660 SRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRG 719
+ + H +LV L+G C Q LV + M +G L + + + K+ +G + L+ + ++G
Sbjct: 72 ASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVH-EHKDNIGSQLLLNWCVQIAKG 129
Query: 720 ILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKG 779
++YL + HRD+ A N+L+ K+ DFGL+RL +EG + + K
Sbjct: 130 MMYLEERR---LVHRDLAARNVLVKSPNHVKITDFGLARL-----LEGDEKEYNADGGKM 181
Query: 780 TPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFS 838
++ E K T +SDV+S GV EL+T G +P + RE+ +
Sbjct: 182 PIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKP--YDGIPTREIPDLLEK----- 234
Query: 839 VIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMREL 880
G P C + +KC + D+RP E+ E
Sbjct: 235 ---GERLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEF 273
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 133/293 (45%), Gaps = 45/293 (15%)
Query: 617 IGQGGYGKVYK----GILPD----GTVVAVKRAQEGSLQGE-KEFLTEIQFLSRL-HHRN 666
+G+G +G+V GI D VAVK ++ + + + + ++E++ + + H+N
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 667 LVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKS--------------KEPLGFAMRLSI 712
+++L+G C ++G ++ E+ S G LR+ L A+ +E + F +S
Sbjct: 95 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 154
Query: 713 ALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAH 772
+RG+ YL ++ HRD+ A N+L+ K+ADFGL+R DI I
Sbjct: 155 TYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMKIADFGLAR-----DINNIDYYK 206
Query: 773 VSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAY 831
+T + ++ PE T +SDV+S GV+ E+ T G P
Sbjct: 207 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP-----------GI 255
Query: 832 QSSMMFSVI-DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883
+F ++ +G+ P+ C + + C RP+ +++ +L+ I
Sbjct: 256 PVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 308
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 86.7 bits (213), Expect = 6e-17, Method: Composition-based stats.
Identities = 82/281 (29%), Positives = 126/281 (44%), Gaps = 25/281 (8%)
Query: 617 IGQGGYGKVY---KGILPDGT--VVAVK--RAQEGSLQGEKEFLTEIQFLSRLHHRNLVS 669
+G+G +GKV DGT +VAVK +A G Q + EI L L+H +++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGP-QHRSGWKQEIDILRTLYHEHIIK 80
Query: 670 LVGYCDEEGEQ--MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEA 727
G C+++GE+ LV E++ G+LRD L S +G A L A G+ YLH +
Sbjct: 81 YKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHS---IGLAQLLLFAQQICEGMAYLHAQH 137
Query: 728 DPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPE 787
HR++ A N+LLD+ K+ DFGL++ P EG V + PE
Sbjct: 138 ---YIHRNLAARNVLLDNDRLVKIGDFGLAKAVP----EGHEYYRVREDGDSPVFWYAPE 190
Query: 788 YFLTHKLTDKSDVYSLGVVFLELLTGMQPI-SHGKNIVREVNIAYQSSMMFSVID----G 842
+K SDV+S GV ELLT S + + IA + + + G
Sbjct: 191 CLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERG 250
Query: 843 NMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883
P +C + L C + E RP+ ++ L+++
Sbjct: 251 ERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPILKTV 291
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 126/282 (44%), Gaps = 27/282 (9%)
Query: 606 LATNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRA-----QEGSLQGEKEFLTEIQFL 659
L +G G +G VYKGI +P+G V + A + + EF+ E +
Sbjct: 35 LKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIM 94
Query: 660 SRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRG 719
+ + H +LV L+G C Q LV + M +G L + + + K+ +G + L+ + ++G
Sbjct: 95 ASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVH-EHKDNIGSQLLLNWCVQIAKG 152
Query: 720 ILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKG 779
++YL + HRD+ A N+L+ K+ DFGL+RL +EG + + K
Sbjct: 153 MMYLEERR---LVHRDLAARNVLVKSPNHVKITDFGLARL-----LEGDEKEYNADGGKM 204
Query: 780 TPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFS 838
++ E K T +SDV+S GV EL+T G +P + RE+ +
Sbjct: 205 PIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKP--YDGIPTREIPDLLEK----- 257
Query: 839 VIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMREL 880
G P C + +KC + D+RP E+ E
Sbjct: 258 ---GERLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEF 296
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 133/298 (44%), Gaps = 55/298 (18%)
Query: 617 IGQGGYGKVYK----GILPDG----TVVAVKRAQEGSLQGE-KEFLTEIQFLSRL-HHRN 666
+G+G +G+V G+ D T VAVK + + + + + ++E++ + + H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 667 LVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKS--------------KEPLGFAMRLSI 712
+++L+G C ++G ++ E+ S G LR+ L A+ +E L +S
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 155
Query: 713 ALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAH 772
A +RG+ YL A HRD+ A N+L+ K+ADFGL+R DI H
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR-----DIH-----H 202
Query: 773 VSTVVKGTPG-----YLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVRE 826
+ K T G ++ PE T +SDV+S GV+ E+ T G P
Sbjct: 203 IDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYP-------- 254
Query: 827 VNIAYQSSMMFSVI-DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883
+F ++ +G+ PS C + + C RP+ +++ +L+ I
Sbjct: 255 ---GVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 309
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 126/299 (42%), Gaps = 42/299 (14%)
Query: 617 IGQGGYGKVYKGIL------PDGTVVAVKRAQE-GSLQGEKEFLTEIQFLSRLHHRNLVS 669
+G G +G+VY+G + P VAVK E S Q E +FL E +S+ +H+N+V
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 670 LVGYCDEEGEQMLVYEFMSNGTLRDQLSA---KSKEPLGFAM--RLSIALGSSRGILYLH 724
+G + + ++ E M+ G L+ L + +P AM L +A + G YL
Sbjct: 105 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 164
Query: 725 TEADPPVFHRDIKASNILLDHK---FTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTP 781
HRDI A N LL AK+ DFG++R DI
Sbjct: 165 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR-----DIYRASYYRKGGCAMLPV 216
Query: 782 GYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVI 840
++ PE F+ T K+D +S GV+ E+ + G P N Q + F
Sbjct: 217 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN---------QEVLEFVTS 267
Query: 841 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFIN 899
G M P C ++ +C Q + + RP+ + ++ +E T+ P+ IN
Sbjct: 268 GGRMDP-PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYC--------TQDPDVIN 317
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 133/293 (45%), Gaps = 45/293 (15%)
Query: 617 IGQGGYGKVYK----GILPD----GTVVAVKRAQEGSLQGE-KEFLTEIQFLSRL-HHRN 666
+G+G +G+V GI D VAVK ++ + + + + ++E++ + + H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 667 LVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKS--------------KEPLGFAMRLSI 712
+++L+G C ++G ++ E+ S G LR+ L A+ +E + F +S
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 713 ALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAH 772
+RG+ YL ++ HRD+ A N+L+ ++ADFGL+R DI I
Sbjct: 163 TYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMRIADFGLAR-----DINNIDYYK 214
Query: 773 VSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAY 831
+T + ++ PE T +SDV+S GV+ E+ T G P
Sbjct: 215 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP-----------GI 263
Query: 832 QSSMMFSVI-DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883
+F ++ +G+ P+ C + + C RP+ +++ +L+ I
Sbjct: 264 PVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 103/213 (48%), Gaps = 25/213 (11%)
Query: 609 NNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKE-----FLTEIQFLSRLH 663
+ ++G+G YG VYK G +VA+KR + L E E + EI L LH
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIR---LDAEDEGIPSTAIREISLLKELH 77
Query: 664 HRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFA-MRLSIALGSS-RGIL 721
H N+VSL+ E LV+EFM +D + G ++ I L RG+
Sbjct: 78 HPNIVSLIDVIHSERCLTLVFEFME----KDLKKVLDENKTGLQDSQIKIYLYQLLRGVA 133
Query: 722 YLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTP 781
+ H + HRD+K N+L++ K+ADFGL+R +P V ++ VV T
Sbjct: 134 HCHQHR---ILHRDLKPQNLLINSDGALKLADFGLARAFGIP-----VRSYTHEVV--TL 183
Query: 782 GYLDPEYFL-THKLTDKSDVYSLGVVFLELLTG 813
Y P+ + + K + D++S+G +F E++TG
Sbjct: 184 WYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITG 216
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 103/213 (48%), Gaps = 25/213 (11%)
Query: 609 NNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKE-----FLTEIQFLSRLH 663
+ ++G+G YG VYK G +VA+KR + L E E + EI L LH
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIR---LDAEDEGIPSTAIREISLLKELH 77
Query: 664 HRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFA-MRLSIALGSS-RGIL 721
H N+VSL+ E LV+EFM +D + G ++ I L RG+
Sbjct: 78 HPNIVSLIDVIHSERCLTLVFEFME----KDLKKVLDENKTGLQDSQIKIYLYQLLRGVA 133
Query: 722 YLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTP 781
+ H + HRD+K N+L++ K+ADFGL+R +P V ++ VV T
Sbjct: 134 HCHQHR---ILHRDLKPQNLLINSDGALKLADFGLARAFGIP-----VRSYTHEVV--TL 183
Query: 782 GYLDPEYFL-THKLTDKSDVYSLGVVFLELLTG 813
Y P+ + + K + D++S+G +F E++TG
Sbjct: 184 WYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITG 216
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 126/299 (42%), Gaps = 42/299 (14%)
Query: 617 IGQGGYGKVYKGIL------PDGTVVAVKRAQE-GSLQGEKEFLTEIQFLSRLHHRNLVS 669
+G G +G+VY+G + P VAVK E S Q E +FL E +S+ +H+N+V
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 670 LVGYCDEEGEQMLVYEFMSNGTLRDQLSA---KSKEPLGFAM--RLSIALGSSRGILYLH 724
+G + + ++ E M+ G L+ L + +P AM L +A + G YL
Sbjct: 90 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 149
Query: 725 TEADPPVFHRDIKASNILLDHK---FTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTP 781
HRDI A N LL AK+ DFG++R DI
Sbjct: 150 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR-----DIYRASYYRKGGCAMLPV 201
Query: 782 GYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVI 840
++ PE F+ T K+D +S GV+ E+ + G P N Q + F
Sbjct: 202 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN---------QEVLEFVTS 252
Query: 841 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFIN 899
G M P C ++ +C Q + + RP+ + ++ +E T+ P+ IN
Sbjct: 253 GGRMDP-PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYC--------TQDPDVIN 302
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 126/299 (42%), Gaps = 42/299 (14%)
Query: 617 IGQGGYGKVYKGIL------PDGTVVAVKRAQE-GSLQGEKEFLTEIQFLSRLHHRNLVS 669
+G G +G+VY+G + P VAVK E S Q E +FL E +S+ +H+N+V
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 670 LVGYCDEEGEQMLVYEFMSNGTLRDQLSA---KSKEPLGFAM--RLSIALGSSRGILYLH 724
+G + + ++ E M+ G L+ L + +P AM L +A + G YL
Sbjct: 113 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 725 TEADPPVFHRDIKASNILLDHK---FTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTP 781
HRDI A N LL AK+ DFG++R DI
Sbjct: 173 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR-----DIYRASYYRKGGCAMLPV 224
Query: 782 GYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVI 840
++ PE F+ T K+D +S GV+ E+ + G P N Q + F
Sbjct: 225 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN---------QEVLEFVTS 275
Query: 841 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFIN 899
G M P C ++ +C Q + + RP+ + ++ +E T+ P+ IN
Sbjct: 276 GGRMDP-PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYC--------TQDPDVIN 325
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 86.3 bits (212), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 126/299 (42%), Gaps = 42/299 (14%)
Query: 617 IGQGGYGKVYKGIL------PDGTVVAVKRAQE-GSLQGEKEFLTEIQFLSRLHHRNLVS 669
+G G +G+VY+G + P VAVK E S Q E +FL E +S+ +H+N+V
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 670 LVGYCDEEGEQMLVYEFMSNGTLRDQLSA---KSKEPLGFAM--RLSIALGSSRGILYLH 724
+G + + ++ E M+ G L+ L + +P AM L +A + G YL
Sbjct: 98 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 725 TEADPPVFHRDIKASNILLDHK---FTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTP 781
HRDI A N LL AK+ DFG++R DI
Sbjct: 158 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR-----DIYRASYYRKGGCAMLPV 209
Query: 782 GYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVI 840
++ PE F+ T K+D +S GV+ E+ + G P N Q + F
Sbjct: 210 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN---------QEVLEFVTS 260
Query: 841 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFIN 899
G M P C ++ +C Q + + RP+ + ++ +E T+ P+ IN
Sbjct: 261 GGRMDP-PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYC--------TQDPDVIN 310
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 86.3 bits (212), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 126/299 (42%), Gaps = 42/299 (14%)
Query: 617 IGQGGYGKVYKGIL------PDGTVVAVKRAQE-GSLQGEKEFLTEIQFLSRLHHRNLVS 669
+G G +G+VY+G + P VAVK E S Q E +FL E +S+ +H+N+V
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 670 LVGYCDEEGEQMLVYEFMSNGTLRDQLSA---KSKEPLGFAM--RLSIALGSSRGILYLH 724
+G + + ++ E M+ G L+ L + +P AM L +A + G YL
Sbjct: 98 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 725 TEADPPVFHRDIKASNILLDHK---FTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTP 781
HRDI A N LL AK+ DFG++R DI
Sbjct: 158 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR-----DIYRASYYRKGGCAMLPV 209
Query: 782 GYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVI 840
++ PE F+ T K+D +S GV+ E+ + G P N Q + F
Sbjct: 210 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN---------QEVLEFVTS 260
Query: 841 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFIN 899
G M P C ++ +C Q + + RP+ + ++ +E T+ P+ IN
Sbjct: 261 GGRMDP-PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYC--------TQDPDVIN 310
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 86.3 bits (212), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 126/299 (42%), Gaps = 42/299 (14%)
Query: 617 IGQGGYGKVYKGIL------PDGTVVAVKRAQE-GSLQGEKEFLTEIQFLSRLHHRNLVS 669
+G G +G+VY+G + P VAVK E S Q E +FL E +S+ +H+N+V
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 670 LVGYCDEEGEQMLVYEFMSNGTLRDQLSA---KSKEPLGFAM--RLSIALGSSRGILYLH 724
+G + + ++ E M+ G L+ L + +P AM L +A + G YL
Sbjct: 115 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 174
Query: 725 TEADPPVFHRDIKASNILLDHK---FTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTP 781
HRDI A N LL AK+ DFG++R DI
Sbjct: 175 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR-----DIYRASYYRKGGCAMLPV 226
Query: 782 GYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVI 840
++ PE F+ T K+D +S GV+ E+ + G P N Q + F
Sbjct: 227 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN---------QEVLEFVTS 277
Query: 841 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFIN 899
G M P C ++ +C Q + + RP+ + ++ +E T+ P+ IN
Sbjct: 278 GGRMDP-PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYC--------TQDPDVIN 327
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 129/284 (45%), Gaps = 38/284 (13%)
Query: 617 IGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD 675
+G+G +G+ K + G V+ +K + ++ FL E++ + L H N++ +G
Sbjct: 18 LGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLY 77
Query: 676 EEGEQMLVYEFMSNGTLRDQL-SAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHR 734
++ + E++ GTLR + S S+ P ++ R+S A + G+ YLH+ + HR
Sbjct: 78 KDKRLNFITEYIKGGTLRGIIKSMDSQYP--WSQRVSFAKDIASGMAYLHSMN---IIHR 132
Query: 735 DIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVK----------GTPGYL 784
D+ + N L+ VADFGL+RL E P + ++ K G P ++
Sbjct: 133 DLNSHNCLVRENKNVVVADFGLARLMV---DEKTQPEGLRSLKKPDRKKRYTVVGNPYWM 189
Query: 785 DPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNI---AYQSSMMFSV-I 840
PE +K DV+S G+V E I+ VN +M F + +
Sbjct: 190 APEMINGRSYDEKVDVFSFGIVLCE-------------IIGRVNADPDYLPRTMDFGLNV 236
Query: 841 DGNMGSY-PSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883
G + Y P C F + ++CC + + RPS ++ LE++
Sbjct: 237 RGFLDRYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETL 280
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 132/283 (46%), Gaps = 20/283 (7%)
Query: 615 TQIGQGGYGKV----YKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVS 669
+Q+G+G +G V Y + + G +VAVK+ Q +++F EIQ L LH +V
Sbjct: 16 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 75
Query: 670 LVGYCDEEGEQ--MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEA 727
G G Q LV E++ +G LRD L + + L + L + +G+ YL +
Sbjct: 76 YRGVSYGPGRQSLRLVMEYLPSGCLRDFLQ-RHRARLDASRLLLYSSQICKGMEYLGSRR 134
Query: 728 DPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPE 787
HRD+ A NIL++ + K+ADFGL++L P+ +V + + + PE
Sbjct: 135 ---CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPI----FWYAPE 187
Query: 788 YFLTHKLTDKSDVYSLGVVFLELLTGM-QPISHGKNIVR----EVNIAYQSSMMFSVIDG 842
+ + +SDV+S GVV EL T + S +R E ++ S ++ + +G
Sbjct: 188 SLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGSERDVPALSRLLELLEEG 247
Query: 843 NMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 885
P C + +L C RPS S + +L+ +W+
Sbjct: 248 QRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWS 290
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 126/299 (42%), Gaps = 42/299 (14%)
Query: 617 IGQGGYGKVYKGIL------PDGTVVAVKRAQE-GSLQGEKEFLTEIQFLSRLHHRNLVS 669
+G G +G+VY+G + P VAVK E S Q E +FL E +S+ +H+N+V
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 670 LVGYCDEEGEQMLVYEFMSNGTLRDQLSA---KSKEPLGFAM--RLSIALGSSRGILYLH 724
+G + + ++ E M+ G L+ L + +P AM L +A + G YL
Sbjct: 139 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 198
Query: 725 TEADPPVFHRDIKASNILLDHK---FTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTP 781
HRDI A N LL AK+ DFG++R DI
Sbjct: 199 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR-----DIYRAGYYRKGGCAMLPV 250
Query: 782 GYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVI 840
++ PE F+ T K+D +S GV+ E+ + G P N Q + F
Sbjct: 251 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN---------QEVLEFVTS 301
Query: 841 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFIN 899
G M P C ++ +C Q + + RP+ + ++ +E T+ P+ IN
Sbjct: 302 GGRMDP-PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYC--------TQDPDVIN 351
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 126/299 (42%), Gaps = 42/299 (14%)
Query: 617 IGQGGYGKVYKGIL------PDGTVVAVKRAQEG-SLQGEKEFLTEIQFLSRLHHRNLVS 669
+G G +G+VY+G + P VAVK E S Q E +FL E +S+ +H+N+V
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 670 LVGYCDEEGEQMLVYEFMSNGTLRDQLSA---KSKEPLGFAM--RLSIALGSSRGILYLH 724
+G + + ++ E M+ G L+ L + +P AM L +A + G YL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 725 TEADPPVFHRDIKASNILLDHK---FTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTP 781
HRDI A N LL AK+ DFG++R DI
Sbjct: 173 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR-----DIYRASYYRKGGCAMLPV 224
Query: 782 GYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVI 840
++ PE F+ T K+D +S GV+ E+ + G P N Q + F
Sbjct: 225 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN---------QEVLEFVTS 275
Query: 841 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFIN 899
G M P C ++ +C Q + + RP+ + ++ +E T+ P+ IN
Sbjct: 276 GGRMDP-PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYC--------TQDPDVIN 325
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 126/299 (42%), Gaps = 42/299 (14%)
Query: 617 IGQGGYGKVYKGIL------PDGTVVAVKRAQE-GSLQGEKEFLTEIQFLSRLHHRNLVS 669
+G G +G+VY+G + P VAVK E S Q E +FL E +S+ +H+N+V
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 670 LVGYCDEEGEQMLVYEFMSNGTLRDQLSA---KSKEPLGFAM--RLSIALGSSRGILYLH 724
+G + + ++ E M+ G L+ L + +P AM L +A + G YL
Sbjct: 125 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 184
Query: 725 TEADPPVFHRDIKASNILLDHK---FTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTP 781
HRDI A N LL AK+ DFG++R DI
Sbjct: 185 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR-----DIYRASYYRKGGCAMLPV 236
Query: 782 GYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVI 840
++ PE F+ T K+D +S GV+ E+ + G P N Q + F
Sbjct: 237 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN---------QEVLEFVTS 287
Query: 841 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFIN 899
G M P C ++ +C Q + + RP+ + ++ +E T+ P+ IN
Sbjct: 288 GGRMDP-PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYC--------TQDPDVIN 337
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 126/299 (42%), Gaps = 42/299 (14%)
Query: 617 IGQGGYGKVYKGIL------PDGTVVAVKRAQE-GSLQGEKEFLTEIQFLSRLHHRNLVS 669
+G G +G+VY+G + P VAVK E S Q E +FL E +S+ +H+N+V
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 670 LVGYCDEEGEQMLVYEFMSNGTLRDQLSA---KSKEPLGFAM--RLSIALGSSRGILYLH 724
+G + + ++ E M+ G L+ L + +P AM L +A + G YL
Sbjct: 116 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 175
Query: 725 TEADPPVFHRDIKASNILLDHK---FTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTP 781
HRDI A N LL AK+ DFG++R DI
Sbjct: 176 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR-----DIYRAGYYRKGGCAMLPV 227
Query: 782 GYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVI 840
++ PE F+ T K+D +S GV+ E+ + G P N Q + F
Sbjct: 228 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN---------QEVLEFVTS 278
Query: 841 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFIN 899
G M P C ++ +C Q + + RP+ + ++ +E T+ P+ IN
Sbjct: 279 GGRMDP-PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYC--------TQDPDVIN 328
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 135/312 (43%), Gaps = 54/312 (17%)
Query: 606 LATNNFNSSTQIGQGGYGKVYKG-ILPDGTVV--AVKRAQE-GSLQGEKEFLTEIQFLSR 661
L N+ IG+G +G+V K I DG + A+KR +E S ++F E++ L +
Sbjct: 19 LDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCK 78
Query: 662 L-HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRD--------------QLSAKSKEPLGF 706
L HH N+++L+G C+ G L E+ +G L D ++ + L
Sbjct: 79 LGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSS 138
Query: 707 AMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 766
L A +RG+ YL + HR++ A NIL+ + AK+ADFGLSR V
Sbjct: 139 QQLLHFAADVARGMDYL---SQKQFIHRNLAARNILVGENYVAKIADFGLSRGQEV---- 191
Query: 767 GIVPAHVSTVVKGTPGYLDPEYFLTHKL-----TDKSDVYSLGVVFLELLT-GMQPISHG 820
VK T G L + L T SDV+S GV+ E+++ G P G
Sbjct: 192 ---------YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYC-G 241
Query: 821 KNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMREL 880
+ + + G P C ++ L +C +++ RPS +++ L
Sbjct: 242 MTC---------AELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQI---L 289
Query: 881 ESIWNMMPESDT 892
S+ M+ E T
Sbjct: 290 VSLNRMLEERKT 301
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 134/295 (45%), Gaps = 38/295 (12%)
Query: 609 NNFNSSTQIGQGGYGKVYK----GILPDGTV--VAVKRAQEGSLQGEKE-FLTEIQFLSR 661
NN +G G +GKV + G+ + V VAVK + + EKE ++E++ +S
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 662 L-HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSK----EPLGFAMRLSIALGS 716
L H N+V+L+G C G +++ E+ G L + L KS+ +P FA+ S A S
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDP-AFAIANSTA--S 162
Query: 717 SRGILYLHTE--------ADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGI 768
+R +L+ ++ A HRD+ A N+LL + AK+ DFGL+R + D I
Sbjct: 163 TRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR-DIMNDSNYI 221
Query: 769 VPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREV 827
V + VK ++ PE T +SDV+S G++ E+ + G+ P
Sbjct: 222 VKGNARLPVK----WMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYP--------- 268
Query: 828 NIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELES 882
I S V DG + P+ + + C E RP+ ++ L+
Sbjct: 269 GILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQE 323
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 132/283 (46%), Gaps = 20/283 (7%)
Query: 615 TQIGQGGYGKV----YKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVS 669
+Q+G+G +G V Y + + G +VAVK+ Q +++F EIQ L LH +V
Sbjct: 29 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 88
Query: 670 LVGYCDEEGEQ--MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEA 727
G G Q LV E++ +G LRD L + + L + L + +G+ YL +
Sbjct: 89 YRGVSYGPGRQSLRLVMEYLPSGCLRDFLQ-RHRARLDASRLLLYSSQICKGMEYLGSRR 147
Query: 728 DPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPE 787
HRD+ A NIL++ + K+ADFGL++L P+ +V + + + PE
Sbjct: 148 ---CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPI----FWYAPE 200
Query: 788 YFLTHKLTDKSDVYSLGVVFLELLTGM-QPISHGKNIVR----EVNIAYQSSMMFSVIDG 842
+ + +SDV+S GVV EL T + S +R E ++ S ++ + +G
Sbjct: 201 SLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEG 260
Query: 843 NMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 885
P C + +L C RPS S + +L+ +W+
Sbjct: 261 QRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWS 303
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 132/293 (45%), Gaps = 45/293 (15%)
Query: 617 IGQGGYGKVYK----GILPD----GTVVAVKRAQEGSLQGE-KEFLTEIQFLSRL-HHRN 666
+G+G +G+V GI D VAVK ++ + + + + ++E++ + + H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 667 LVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKS--------------KEPLGFAMRLSI 712
+++L+G C ++G ++ + S G LR+ L A+ +E + F +S
Sbjct: 103 IINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 713 ALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAH 772
+RG+ YL ++ HRD+ A N+L+ K+ADFGL+R DI I
Sbjct: 163 TYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMKIADFGLAR-----DINNIDYYK 214
Query: 773 VSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAY 831
+T + ++ PE T +SDV+S GV+ E+ T G P
Sbjct: 215 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP-----------GI 263
Query: 832 QSSMMFSVI-DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883
+F ++ +G+ P+ C + + C RP+ +++ +L+ I
Sbjct: 264 PVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 116/259 (44%), Gaps = 21/259 (8%)
Query: 616 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD 675
++G G +G+V+ G + T VAVK + G++ + FL E + L H LV L
Sbjct: 20 RLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQA-FLEEANLMKTLQHDKLVRLYAVVT 78
Query: 676 EEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRD 735
E ++ E+M+ G+L D L + + + + + G+ Y+ + HRD
Sbjct: 79 REEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKN---YIHRD 135
Query: 736 IKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLT 795
++A+N+L+ K+ADFGL+R+ + D E +K T PE T
Sbjct: 136 LRAANVLVSESLMCKIADFGLARV--IEDNEYTAREGAKFPIKWTA----PEAINFGCFT 189
Query: 796 DKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEK 854
KSDV+S G++ E++T G P N + +M ++ G C ++
Sbjct: 190 IKSDVWSFGILLYEIVTYGKIPYPGRTN----------ADVMTALSQGYRMPRVENCPDE 239
Query: 855 FIKLALKCCQDETDARPSM 873
+ C +++ + RP+
Sbjct: 240 LYDIMKMCWKEKAEERPTF 258
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 85.1 bits (209), Expect = 2e-16, Method: Composition-based stats.
Identities = 80/279 (28%), Positives = 123/279 (44%), Gaps = 23/279 (8%)
Query: 617 IGQGGYGKVY---KGILPDGT--VVAVKRAQEG-SLQGEKEFLTEIQFLSRLHHRNLVSL 670
+G+G +GKV DGT +VAVK +EG Q + EI+ L L+H ++V
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 75
Query: 671 VGYCDEEGEQ--MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEAD 728
G C+++GE+ LV E++ G+LRD L + +G A L A G+ YLH +
Sbjct: 76 KGCCEDQGEKSVQLVMEYVPLGSLRDYLP---RHCVGLAQLLLFAQQICEGMAYLHAQH- 131
Query: 729 PPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEY 788
HR + A N+LLD+ K+ DFGL++ P EG V + PE
Sbjct: 132 --YIHRALAARNVLLDNDRLVKIGDFGLAKAVP----EGHEYYRVREDGDSPVFWYAPEC 185
Query: 789 FLTHKLTDKSDVYSLGVVFLELLT----GMQPISHGKNIVREVNIAYQSSMMFSVID-GN 843
K SDV+S GV ELLT P + ++ + +++ G
Sbjct: 186 LKECKFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTELIGHTQGQMTVLRLTELLERGE 245
Query: 844 MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELES 882
P C + L C + E RP+ ++ L++
Sbjct: 246 RLPRPDRCPCEIYHLMKNCWETEASFRPTFQNLVPILQT 284
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 85.1 bits (209), Expect = 2e-16, Method: Composition-based stats.
Identities = 80/279 (28%), Positives = 123/279 (44%), Gaps = 23/279 (8%)
Query: 617 IGQGGYGKVY---KGILPDGT--VVAVKRAQEG-SLQGEKEFLTEIQFLSRLHHRNLVSL 670
+G+G +GKV DGT +VAVK +EG Q + EI+ L L+H ++V
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 76
Query: 671 VGYCDEEGEQ--MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEAD 728
G C+++GE+ LV E++ G+LRD L + +G A L A G+ YLH +
Sbjct: 77 KGCCEDQGEKSVQLVMEYVPLGSLRDYLP---RHCVGLAQLLLFAQQICEGMAYLHAQH- 132
Query: 729 PPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEY 788
HR + A N+LLD+ K+ DFGL++ P EG V + PE
Sbjct: 133 --YIHRALAARNVLLDNDRLVKIGDFGLAKAVP----EGHEYYRVREDGDSPVFWYAPEC 186
Query: 789 FLTHKLTDKSDVYSLGVVFLELLT----GMQPISHGKNIVREVNIAYQSSMMFSVID-GN 843
K SDV+S GV ELLT P + ++ + +++ G
Sbjct: 187 LKECKFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTELIGHTQGQMTVLRLTELLERGE 246
Query: 844 MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELES 882
P C + L C + E RP+ ++ L++
Sbjct: 247 RLPRPDRCPCEIYHLMKNCWETEASFRPTFQNLVPILQT 285
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 106/213 (49%), Gaps = 21/213 (9%)
Query: 607 ATNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKE-----FLTEIQFLS 660
+ NF +IG+G YG VYK G VVA+K+ + L E E + EI L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR---LDTETEGVPSTAIREISLLK 59
Query: 661 RLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGI 720
L+H N+V L+ E + LV+EF+S L+D + A + + + S +G+
Sbjct: 60 ELNHPNIVKLLDVIHTENKLYLVFEFLSMD-LKDFMDASALTGIPLPLIKSYLFQLLQGL 118
Query: 721 LYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGT 780
+ H+ V HRD+K N+L++ + K+ADFGL+R VP V + VV T
Sbjct: 119 AFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-----VRTYXHEVV--T 168
Query: 781 PGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLT 812
Y PE L K + D++SLG +F E++T
Sbjct: 169 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 126/299 (42%), Gaps = 42/299 (14%)
Query: 617 IGQGGYGKVYKGIL------PDGTVVAVKRAQE-GSLQGEKEFLTEIQFLSRLHHRNLVS 669
+G G +G+VY+G + P VAVK E S Q E +FL E +S+ +H+N+V
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 670 LVGYCDEEGEQMLVYEFMSNGTLRDQLSA---KSKEPLGFAM--RLSIALGSSRGILYLH 724
+G + + ++ E M+ G L+ L + +P AM L +A + G YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 725 TEADPPVFHRDIKASNILLDHK---FTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTP 781
HRDI A N LL AK+ DFG+++ DI
Sbjct: 159 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAQ-----DIYRASYYRKGGCAMLPV 210
Query: 782 GYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVI 840
++ PE F+ T K+D +S GV+ E+ + G P N Q + F
Sbjct: 211 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN---------QEVLEFVTS 261
Query: 841 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFIN 899
G M P C ++ +C Q + + RP+ + ++ +E T+ P+ IN
Sbjct: 262 GGRMDP-PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYC--------TQDPDVIN 311
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 106/213 (49%), Gaps = 21/213 (9%)
Query: 607 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKE-----FLTEIQFLS 660
+ NF +IG+G YG VYK G VVA+K+ + L E E + EI L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR---LDTETEGVPSTAIREISLLK 60
Query: 661 RLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGI 720
L+H N+V L+ E + LV+EF+S L+D + A + + + S +G+
Sbjct: 61 ELNHPNIVKLLDVIHTENKLYLVFEFLSMD-LKDFMDASALTGIPLPLIKSYLFQLLQGL 119
Query: 721 LYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGT 780
+ H+ V HRD+K N+L++ + K+ADFGL+R VP V + VV T
Sbjct: 120 AFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-----VRTYXHEVV--T 169
Query: 781 PGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLT 812
Y PE L K + D++SLG +F E++T
Sbjct: 170 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 132/293 (45%), Gaps = 45/293 (15%)
Query: 617 IGQGGYGKVYK----GILPD----GTVVAVKRAQEGSLQGE-KEFLTEIQFLSRL-HHRN 666
+G+G +G+V GI D VAVK ++ + + + + ++E++ + + H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 667 LVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKS--------------KEPLGFAMRLSI 712
+++L+G C ++G ++ + S G LR+ L A+ +E + F +S
Sbjct: 103 IINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 713 ALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAH 772
+RG+ YL ++ HRD+ A N+L+ K+ADFGL+R DI I
Sbjct: 163 TYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMKIADFGLAR-----DINNIDYYK 214
Query: 773 VSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAY 831
+T + ++ PE T +SDV+S GV+ E+ T G P
Sbjct: 215 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP-----------GI 263
Query: 832 QSSMMFSVI-DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883
+F ++ +G+ P+ C + + C RP+ +++ +L+ I
Sbjct: 264 PVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 131/283 (46%), Gaps = 20/283 (7%)
Query: 615 TQIGQGGYGKV----YKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVS 669
+Q+G+G +G V Y + + G +VAVK+ Q +++F EIQ L LH +V
Sbjct: 17 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 76
Query: 670 LVGYCDEEGEQ--MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEA 727
G G Q LV E++ +G LRD L + + L + L + +G+ YL +
Sbjct: 77 YRGVSYGPGRQSLRLVMEYLPSGCLRDFLQ-RHRARLDASRLLLYSSQICKGMEYLGSRR 135
Query: 728 DPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPE 787
HRD+ A NIL++ + K+ADFGL++L P+ +V + + + PE
Sbjct: 136 ---CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPI----FWYAPE 188
Query: 788 YFLTHKLTDKSDVYSLGVVFLELLTGM-QPISHGKNIVR----EVNIAYQSSMMFSVIDG 842
+ + +SDV+S GVV EL T + S +R E ++ ++ + +G
Sbjct: 189 SLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALCRLLELLEEG 248
Query: 843 NMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 885
P C + +L C RPS S + +L+ +W+
Sbjct: 249 QRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWS 291
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 121/271 (44%), Gaps = 21/271 (7%)
Query: 616 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD 675
++G G +G+V+ G + T VAVK + G++ + FL E + L H LV L
Sbjct: 19 KLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQA-FLEEANLMKTLQHDKLVRLYAVVT 77
Query: 676 EEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRD 735
+E ++ EFM+ G+L D L + + + + + G+ Y+ + HRD
Sbjct: 78 KEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKN---YIHRD 134
Query: 736 IKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLT 795
++A+N+L+ K+ADFGL+R+ + D E +K T PE T
Sbjct: 135 LRAANVLVSESLMCKIADFGLARV--IEDNEYTAREGAKFPIKWTA----PEAINFGCFT 188
Query: 796 DKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEK 854
KS+V+S G++ E++T G P N + +M ++ G C ++
Sbjct: 189 IKSNVWSFGILLYEIVTYGKIPYPGRTN----------ADVMSALSQGYRMPRMENCPDE 238
Query: 855 FIKLALKCCQDETDARPSMSEVMRELESIWN 885
+ C +++ + RP+ + L+ +
Sbjct: 239 LYDIMKMCWKEKAEERPTFDYLQSVLDDFYT 269
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 105/213 (49%), Gaps = 21/213 (9%)
Query: 607 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKE-----FLTEIQFLS 660
+ NF +IG+G YG VYK G VVA+K+ + L E E + EI L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR---LDTETEGVPSTAIREISLLK 57
Query: 661 RLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGI 720
L+H N+V L+ E + LV+EF+ L+D + A + + + S +G+
Sbjct: 58 ELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKDFMDASALTGIPLPLIKSYLFQLLQGL 116
Query: 721 LYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGT 780
+ H+ V HRD+K N+L++ + K+ADFGL+R VP V + VV T
Sbjct: 117 AFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVP-----VRTYXHEVV--T 166
Query: 781 PGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLT 812
Y PE L K + D++SLG +F E++T
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 129/291 (44%), Gaps = 34/291 (11%)
Query: 609 NNFNSSTQIGQGGYGKVYK----GILPDGTV--VAVKRAQEGSLQGEKE-FLTEIQFLSR 661
NN +G G +GKV + G+ + V VAVK + + EKE ++E++ +S
Sbjct: 38 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 97
Query: 662 L-HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSK--------EPLGFAMRLSI 712
L H N+V+L+G C G +++ E+ G L + L K++ PL L
Sbjct: 98 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHF 157
Query: 713 ALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAH 772
+ ++G+ +L A HRD+ A N+LL + AK+ DFGL+R + D IV +
Sbjct: 158 SSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR-DIMNDSNYIVKGN 213
Query: 773 VSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAY 831
VK ++ PE T +SDV+S G++ E+ + G+ P I
Sbjct: 214 ARLPVK----WMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYP---------GILV 260
Query: 832 QSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELES 882
S V DG + P+ + + C E RP+ ++ L+
Sbjct: 261 NSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQE 311
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 133/295 (45%), Gaps = 38/295 (12%)
Query: 609 NNFNSSTQIGQGGYGKVYK----GILPDGTV--VAVKRAQEGSLQGEKE-FLTEIQFLSR 661
NN +G G +GKV + G+ + V VAVK + + EKE ++E++ +S
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 662 L-HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSK----EPLGFAMRLSIALGS 716
L H N+V+L+G C G +++ E+ G L + L KS+ +P A ++ + S
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDP---AFAIANSTLS 162
Query: 717 SRGILYLHTE--------ADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGI 768
+R +L+ ++ A HRD+ A N+LL + AK+ DFGL+R + D I
Sbjct: 163 TRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR-DIMNDSNYI 221
Query: 769 VPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREV 827
V + VK ++ PE T +SDV+S G++ E+ + G+ P
Sbjct: 222 VKGNARLPVK----WMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYP--------- 268
Query: 828 NIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELES 882
I S V DG + P+ + + C E RP+ ++ L+
Sbjct: 269 GILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQE 323
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 129/291 (44%), Gaps = 34/291 (11%)
Query: 609 NNFNSSTQIGQGGYGKVYK----GILPDGTV--VAVKRAQEGSLQGEKE-FLTEIQFLSR 661
NN +G G +GKV + G+ + V VAVK + + EKE ++E++ +S
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 662 L-HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSK--------EPLGFAMRLSI 712
L H N+V+L+G C G +++ E+ G L + L K++ PL L
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHF 165
Query: 713 ALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAH 772
+ ++G+ +L A HRD+ A N+LL + AK+ DFGL+R + D IV +
Sbjct: 166 SSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR-DIMNDSNYIVKGN 221
Query: 773 VSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAY 831
VK ++ PE T +SDV+S G++ E+ + G+ P I
Sbjct: 222 ARLPVK----WMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYP---------GILV 268
Query: 832 QSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELES 882
S V DG + P+ + + C E RP+ ++ L+
Sbjct: 269 NSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQE 319
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 124/274 (45%), Gaps = 35/274 (12%)
Query: 616 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKE-FLTEIQFLSRLHHRNLVSLVGYC 674
++G G +GKVYK + +V+A + + + E E ++ EI L+ H N+V L+
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 675 DEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHR 734
E ++ EF + G + D + + + PL + + + + YLH D + HR
Sbjct: 104 YYENNLWILIEFCAGGAV-DAVMLELERPLTESQIQVVCKQTLDALNYLH---DNKIIHR 159
Query: 735 DIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVK-----GTPGYLDPEYF 789
D+KA NIL K+ADFG+S + T+ + GTP ++ PE
Sbjct: 160 DLKAGNILFTLDGDIKLADFGVS------------AKNTRTIQRRDSFIGTPYWMAPEVV 207
Query: 790 LTHKLTD-----KSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 844
+ D K+DV+SLG+ +E + ++P H N +R + + + +
Sbjct: 208 MCETSKDRPYDYKADVWSLGITLIE-MAEIEPPHHELNPMRVL-------LKIAKSEPPT 259
Query: 845 GSYPSECVEKFIKLALKCCQDETDARPSMSEVMR 878
+ PS F KC + DAR + S++++
Sbjct: 260 LAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQ 293
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 83.2 bits (204), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 121/269 (44%), Gaps = 25/269 (9%)
Query: 616 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKE-FLTEIQFLSRLHHRNLVSLVGYC 674
++G G +GKVYK + +V+A + + + E E ++ EI L+ H N+V L+
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 675 DEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHR 734
E ++ EF + G + D + + + PL + + + + YLH D + HR
Sbjct: 104 YYENNLWILIEFCAGGAV-DAVMLELERPLTESQIQVVCKQTLDALNYLH---DNKIIHR 159
Query: 735 DIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKL 794
D+KA NIL K+ADFG+S + GTP ++ PE +
Sbjct: 160 DLKAGNILFTLDGDIKLADFGVSA-------KNTRXIQRRDXFIGTPYWMAPEVVMCETS 212
Query: 795 TD-----KSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPS 849
D K+DV+SLG+ +E + ++P H N +R + + + + + PS
Sbjct: 213 KDRPYDYKADVWSLGITLIE-MAEIEPPHHELNPMRVL-------LKIAKSEPPTLAQPS 264
Query: 850 ECVEKFIKLALKCCQDETDARPSMSEVMR 878
F KC + DAR + S++++
Sbjct: 265 RWSSNFKDFLKKCLEKNVDARWTTSQLLQ 293
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 83.2 bits (204), Expect = 7e-16, Method: Composition-based stats.
Identities = 80/288 (27%), Positives = 131/288 (45%), Gaps = 30/288 (10%)
Query: 615 TQIGQGGYGKV----YKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVS 669
+Q+G+G +G V Y + + G +VAVK+ Q +++F EIQ L LH +V
Sbjct: 13 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 72
Query: 670 L--VGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEA 727
V Y E LV E++ +G LRD L + + L + L + +G+ YL +
Sbjct: 73 YRGVSYGPGRPELRLVMEYLPSGCLRDFLQ-RHRARLDASRLLLYSSQICKGMEYLGSRR 131
Query: 728 DPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPG----- 782
HRD+ A NIL++ + K+ADFGL++L P+ +V PG
Sbjct: 132 ---CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVR---------EPGQSPIF 179
Query: 783 YLDPEYFLTHKLTDKSDVYSLGVVFLELLTGM-QPISHGKNIVR----EVNIAYQSSMMF 837
+ PE + + +SDV+S GVV EL T + S +R E ++ ++
Sbjct: 180 WYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALCRLLE 239
Query: 838 SVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 885
+ +G P C + +L C RPS S + +L+ +W+
Sbjct: 240 LLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWS 287
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 82.8 bits (203), Expect = 8e-16, Method: Composition-based stats.
Identities = 75/301 (24%), Positives = 131/301 (43%), Gaps = 48/301 (15%)
Query: 610 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLV 668
+F IG GG+G+V+K DG +KR + + + E+E ++ L++L H N+V
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAERE----VKALAKLDHVNIV 67
Query: 669 SLVG------YCDEEGEQ----------MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSI 712
G Y E + + EF GTL + + E L + L +
Sbjct: 68 HYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALEL 127
Query: 713 ALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAH 772
++G+ Y+H++ + +RD+K SNI L K+ DFGL + +
Sbjct: 128 FEQITKGVDYIHSKK---LINRDLKPSNIFLVDTKQVKIGDFGL--------VTSLKNDG 176
Query: 773 VSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQ 832
KGT Y+ PE + + D+Y+LG++ ELL + A++
Sbjct: 177 KRXRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL-------------HVCDTAFE 223
Query: 833 SSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDT 892
+S F+ + + S + EK L K + + RP+ SE++R L ++W PE +
Sbjct: 224 TSKFFTDLRDGIISDIFDKKEK--TLLQKLLSKKPEDRPNTSEILRTL-TVWKKSPEKNE 280
Query: 893 K 893
+
Sbjct: 281 R 281
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 121/269 (44%), Gaps = 25/269 (9%)
Query: 616 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKE-FLTEIQFLSRLHHRNLVSLVGYC 674
++G G +GKVYK + +V+A + + + E E ++ EI L+ H N+V L+
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 675 DEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHR 734
E ++ EF + G + D + + + PL + + + + YLH D + HR
Sbjct: 104 YYENNLWILIEFCAGGAV-DAVMLELERPLTESQIQVVCKQTLDALNYLH---DNKIIHR 159
Query: 735 DIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKL 794
D+KA NIL K+ADFG+S + GTP ++ PE +
Sbjct: 160 DLKAGNILFTLDGDIKLADFGVS-------AKNTRXIQRRDSFIGTPYWMAPEVVMCETS 212
Query: 795 TD-----KSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPS 849
D K+DV+SLG+ +E + ++P H N +R + + + + + PS
Sbjct: 213 KDRPYDYKADVWSLGITLIE-MAEIEPPHHELNPMRVL-------LKIAKSEPPTLAQPS 264
Query: 850 ECVEKFIKLALKCCQDETDARPSMSEVMR 878
F KC + DAR + S++++
Sbjct: 265 RWSSNFKDFLKKCLEKNVDARWTTSQLLQ 293
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 130/311 (41%), Gaps = 50/311 (16%)
Query: 609 NNFNSSTQIGQGGYGKVYK----GILPDGTV--VAVKRAQEGSLQGE-KEFLTEIQFLSR 661
+ N +G+G +G+V + GI T VAVK +EG+ E + ++E++ L
Sbjct: 28 DRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 87
Query: 662 L-HHRNLVSLVGYCDEEG-EQMLVYEFMSNGTLRDQLSAKS-------------KEPLGF 706
+ HH N+V+L+G C + G M++ EF G L L +K K+ L
Sbjct: 88 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTL 147
Query: 707 AMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSR-LAPVPDI 765
+ + ++G+ +L A HRD+ A NILL K K+ DFGL+R + PD
Sbjct: 148 EHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPD- 203
Query: 766 EGIVPAHVSTVVKGTP----GYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHG 820
V KG ++ PE T +SDV+S GV+ E+ + G P
Sbjct: 204 ---------XVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP-- 252
Query: 821 KNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMREL 880
+ + +G P + + L C E RP+ SE++ L
Sbjct: 253 -------GVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 305
Query: 881 ESIWNMMPESD 891
++ + D
Sbjct: 306 GNLLQANAQQD 316
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 105/213 (49%), Gaps = 21/213 (9%)
Query: 607 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKE-----FLTEIQFLS 660
+ NF +IG+G YG VYK G VVA+K+ + L E E + EI L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR---LDTETEGVPSTAIREISLLK 60
Query: 661 RLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGI 720
L+H N+V L+ E + LV+EF+S L+ + A + + + S +G+
Sbjct: 61 ELNHPNIVKLLDVIHTENKLYLVFEFLSMD-LKKFMDASALTGIPLPLIKSYLFQLLQGL 119
Query: 721 LYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGT 780
+ H+ V HRD+K N+L++ + K+ADFGL+R VP V + VV T
Sbjct: 120 AFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVP-----VRTYXHEVV--T 169
Query: 781 PGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLT 812
Y PE L K + D++SLG +F E++T
Sbjct: 170 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 126/287 (43%), Gaps = 37/287 (12%)
Query: 606 LATNNFNSSTQIGQGGYGKVYKGI-LPDG----TVVAVKRAQEG-SLQGEKEFLTEIQFL 659
L +G G +G VYKGI +PDG VA+K +E S + KE L E +
Sbjct: 14 LKETELRKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVM 73
Query: 660 SRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRG 719
+ + + L+G C Q LV + M G L D + +++ LG L+ + ++G
Sbjct: 74 AGVGSPYVSRLLGICLTSTVQ-LVTQLMPYGCLLDHVR-ENRGRLGSQDLLNWCMQIAKG 131
Query: 720 ILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE-----GIVPAHVS 774
+ YL D + HRD+ A N+L+ K+ DFGL+RL + + E G VP
Sbjct: 132 MSYLE---DVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIK-- 186
Query: 775 TVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQS 833
++ E L + T +SDV+S GV EL+T G +P + RE+ +
Sbjct: 187 --------WMALESILRRRFTHQSDVWSYGVTVWELMTFGAKP--YDGIPAREIPDLLEK 236
Query: 834 SMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMREL 880
G P C + +KC +++ RP E++ E
Sbjct: 237 --------GERLPQPPICTIDVYMIMVKCWMIDSECRPRFRELVSEF 275
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 130/291 (44%), Gaps = 39/291 (13%)
Query: 606 LATNNFNSSTQIGQGGYGKVYKGI-LPDGTVV----AVKRAQEG-SLQGEKEFLTEIQFL 659
L F +G G +G VYKG+ +P+G V A+K +E S + KE L E +
Sbjct: 16 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 75
Query: 660 SRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRG 719
+ + + ++ L+G C Q L+ + M G L D + + K+ +G L+ + ++G
Sbjct: 76 ASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVR-EHKDNIGSQYLLNWCVQIAKG 133
Query: 720 ILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE-----GIVPAHVS 774
+ YL D + HRD+ A N+L+ K+ DFGL++L + E G VP
Sbjct: 134 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK-- 188
Query: 775 TVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQS 833
++ E L T +SDV+S GV EL+T G +P +
Sbjct: 189 --------WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-----------GIPA 229
Query: 834 SMMFSVID-GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883
S + S+++ G P C + +KC + D+RP E++ E +
Sbjct: 230 SEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 280
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 105/213 (49%), Gaps = 21/213 (9%)
Query: 607 ATNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKE-----FLTEIQFLS 660
+ NF +IG+G YG VYK G VVA+K+ + L E E + EI L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR---LDTETEGVPSTAIREISLLK 58
Query: 661 RLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGI 720
L+H N+V L+ E + LV+EF+S L+ + A + + + S +G+
Sbjct: 59 ELNHPNIVKLLDVIHTENKLYLVFEFLSMD-LKKFMDASALTGIPLPLIKSYLFQLLQGL 117
Query: 721 LYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGT 780
+ H+ V HRD+K N+L++ + K+ADFGL+R VP V + VV T
Sbjct: 118 AFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVP-----VRTYXHEVV--T 167
Query: 781 PGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLT 812
Y PE L K + D++SLG +F E++T
Sbjct: 168 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 130/291 (44%), Gaps = 39/291 (13%)
Query: 606 LATNNFNSSTQIGQGGYGKVYKGI-LPDGTVV----AVKRAQEG-SLQGEKEFLTEIQFL 659
L F +G G +G VYKG+ +P+G V A+K +E S + KE L E +
Sbjct: 14 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 73
Query: 660 SRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRG 719
+ + + ++ L+G C Q L+ + M G L D + + K+ +G L+ + ++G
Sbjct: 74 ASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVR-EHKDNIGSQYLLNWCVQIAKG 131
Query: 720 ILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE-----GIVPAHVS 774
+ YL D + HRD+ A N+L+ K+ DFGL++L + E G VP
Sbjct: 132 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK-- 186
Query: 775 TVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQS 833
++ E L T +SDV+S GV EL+T G +P +
Sbjct: 187 --------WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-----------GIPA 227
Query: 834 SMMFSVID-GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883
S + S+++ G P C + +KC + D+RP E++ E +
Sbjct: 228 SEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 278
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 130/291 (44%), Gaps = 39/291 (13%)
Query: 606 LATNNFNSSTQIGQGGYGKVYKGI-LPDGTVV----AVKRAQEG-SLQGEKEFLTEIQFL 659
L F +G G +G VYKG+ +P+G V A+K +E S + KE L E +
Sbjct: 13 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 72
Query: 660 SRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRG 719
+ + + ++ L+G C Q L+ + M G L D + + K+ +G L+ + ++G
Sbjct: 73 ASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVR-EHKDNIGSQYLLNWCVQIAKG 130
Query: 720 ILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE-----GIVPAHVS 774
+ YL D + HRD+ A N+L+ K+ DFGL++L + E G VP
Sbjct: 131 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK-- 185
Query: 775 TVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQS 833
++ E L T +SDV+S GV EL+T G +P +
Sbjct: 186 --------WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-----------GIPA 226
Query: 834 SMMFSVID-GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883
S + S+++ G P C + +KC + D+RP E++ E +
Sbjct: 227 SEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 277
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 126/293 (43%), Gaps = 39/293 (13%)
Query: 609 NNFNSSTQIGQGGYGKVYK----GILPDGT--VVAVKRAQEGSLQGE-KEFLTEIQFLSR 661
+ N +G+G +G+V + GI T VAVK +EG+ E + ++E++ L
Sbjct: 27 DRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 662 L-HHRNLVSLVGYCDEEG-EQMLVYEFMSNGTLRDQLSAKS----------KEPLGFAMR 709
+ HH N+V+L+G C + G M++ EF G L L +K K+ L
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHL 146
Query: 710 LSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIV 769
+ + ++G+ +L A HRD+ A NILL K K+ DFGL+R DI
Sbjct: 147 ICYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLAR-----DIYK-D 197
Query: 770 PAHVSTVVKGTP-GYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREV 827
P +V P ++ PE T +SDV+S GV+ E+ + G P
Sbjct: 198 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP--------- 248
Query: 828 NIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMREL 880
+ + +G P + + L C E RP+ SE++ L
Sbjct: 249 GVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 301
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 130/291 (44%), Gaps = 39/291 (13%)
Query: 606 LATNNFNSSTQIGQGGYGKVYKGI-LPDGTVV----AVKRAQEG-SLQGEKEFLTEIQFL 659
L F +G G +G VYKG+ +P+G V A+K +E S + KE L E +
Sbjct: 12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 71
Query: 660 SRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRG 719
+ + + ++ L+G C Q L+ + M G L D + + K+ +G L+ + ++G
Sbjct: 72 ASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVR-EHKDNIGSQYLLNWCVQIAKG 129
Query: 720 ILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE-----GIVPAHVS 774
+ YL D + HRD+ A N+L+ K+ DFGL++L + E G VP
Sbjct: 130 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK-- 184
Query: 775 TVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQS 833
++ E L T +SDV+S GV EL+T G +P +
Sbjct: 185 --------WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-----------GIPA 225
Query: 834 SMMFSVID-GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883
S + S+++ G P C + +KC + D+RP E++ E +
Sbjct: 226 SEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 276
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 126/293 (43%), Gaps = 39/293 (13%)
Query: 609 NNFNSSTQIGQGGYGKVYK----GILPDGT--VVAVKRAQEGSLQGE-KEFLTEIQFLSR 661
+ N +G+G +G+V + GI T VAVK +EG+ E + ++E++ L
Sbjct: 27 DRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 662 L-HHRNLVSLVGYCDEEG-EQMLVYEFMSNGTLRDQLSAKS----------KEPLGFAMR 709
+ HH N+V+L+G C + G M++ EF G L L +K K+ L
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHL 146
Query: 710 LSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIV 769
+ + ++G+ +L A HRD+ A NILL K K+ DFGL+R DI
Sbjct: 147 IXYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLAR-----DIYK-D 197
Query: 770 PAHVSTVVKGTP-GYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREV 827
P +V P ++ PE T +SDV+S GV+ E+ + G P
Sbjct: 198 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP--------- 248
Query: 828 NIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMREL 880
+ + +G P + + L C E RP+ SE++ L
Sbjct: 249 GVKIDEEFXRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 301
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 103/211 (48%), Gaps = 21/211 (9%)
Query: 609 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKE-----FLTEIQFLSRL 662
NF +IG+G YG VYK G VVA+K+ + L E E + EI L L
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR---LDTETEGVPSTAIREISLLKEL 59
Query: 663 HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILY 722
+H N+V L+ E + LV+EF+ L+ + A + + + S +G+ +
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 723 LHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPG 782
H+ V HRD+K N+L++ + K+ADFGL+R VP V + VV T
Sbjct: 119 CHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-----VRTYTHEVV--TLW 168
Query: 783 YLDPEYFLTHKLTDKS-DVYSLGVVFLELLT 812
Y PE L K + D++SLG +F E++T
Sbjct: 169 YRAPEILLGXKYYSTAVDIWSLGCIFAEMVT 199
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 130/291 (44%), Gaps = 39/291 (13%)
Query: 606 LATNNFNSSTQIGQGGYGKVYKGI-LPDGTVV----AVKRAQEG-SLQGEKEFLTEIQFL 659
L F +G G +G VYKG+ +P+G V A+K +E S + KE L E +
Sbjct: 13 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 72
Query: 660 SRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRG 719
+ + + ++ L+G C Q L+ + M G L D + + K+ +G L+ + ++G
Sbjct: 73 ASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGXLLDYVR-EHKDNIGSQYLLNWCVQIAKG 130
Query: 720 ILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE-----GIVPAHVS 774
+ YL D + HRD+ A N+L+ K+ DFGL++L + E G VP
Sbjct: 131 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK-- 185
Query: 775 TVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQS 833
++ E L T +SDV+S GV EL+T G +P +
Sbjct: 186 --------WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-----------GIPA 226
Query: 834 SMMFSVID-GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883
S + S+++ G P C + +KC + D+RP E++ E +
Sbjct: 227 SEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 277
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 130/291 (44%), Gaps = 39/291 (13%)
Query: 606 LATNNFNSSTQIGQGGYGKVYKGI-LPDGTVV----AVKRAQEG-SLQGEKEFLTEIQFL 659
L F +G G +G VYKG+ +P+G V A+K +E S + KE L E +
Sbjct: 6 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 65
Query: 660 SRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRG 719
+ + + ++ L+G C Q L+ + M G L D + + K+ +G L+ + ++G
Sbjct: 66 ASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVR-EHKDNIGSQYLLNWCVQIAKG 123
Query: 720 ILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE-----GIVPAHVS 774
+ YL D + HRD+ A N+L+ K+ DFGL++L + E G VP
Sbjct: 124 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK-- 178
Query: 775 TVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQS 833
++ E L T +SDV+S GV EL+T G +P +
Sbjct: 179 --------WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-----------GIPA 219
Query: 834 SMMFSVID-GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883
S + S+++ G P C + +KC + D+RP E++ E +
Sbjct: 220 SEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 270
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 130/291 (44%), Gaps = 39/291 (13%)
Query: 606 LATNNFNSSTQIGQGGYGKVYKGI-LPDGTVV----AVKRAQEG-SLQGEKEFLTEIQFL 659
L F +G G +G VYKG+ +P+G V A+K +E S + KE L E +
Sbjct: 15 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 74
Query: 660 SRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRG 719
+ + + ++ L+G C Q L+ + M G L D + + K+ +G L+ + ++G
Sbjct: 75 ASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVR-EHKDNIGSQYLLNWCVQIAKG 132
Query: 720 ILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE-----GIVPAHVS 774
+ YL D + HRD+ A N+L+ K+ DFGL++L + E G VP
Sbjct: 133 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK-- 187
Query: 775 TVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQS 833
++ E L T +SDV+S GV EL+T G +P +
Sbjct: 188 --------WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-----------GIPA 228
Query: 834 SMMFSVID-GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883
S + S+++ G P C + +KC + D+RP E++ E +
Sbjct: 229 SEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 279
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 130/291 (44%), Gaps = 39/291 (13%)
Query: 606 LATNNFNSSTQIGQGGYGKVYKGI-LPDGTVV----AVKRAQEG-SLQGEKEFLTEIQFL 659
L F +G G +G VYKG+ +P+G V A+K +E S + KE L E +
Sbjct: 15 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 74
Query: 660 SRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRG 719
+ + + ++ L+G C Q L+ + M G L D + + K+ +G L+ + ++G
Sbjct: 75 ASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVR-EHKDNIGSQYLLNWCVQIAKG 132
Query: 720 ILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE-----GIVPAHVS 774
+ YL D + HRD+ A N+L+ K+ DFGL++L + E G VP
Sbjct: 133 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK-- 187
Query: 775 TVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQS 833
++ E L T +SDV+S GV EL+T G +P +
Sbjct: 188 --------WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-----------GIPA 228
Query: 834 SMMFSVID-GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883
S + S+++ G P C + +KC + D+RP E++ E +
Sbjct: 229 SEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 279
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 103/211 (48%), Gaps = 21/211 (9%)
Query: 609 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKE-----FLTEIQFLSRL 662
NF +IG+G YG VYK G VVA+K+ + L E E + EI L L
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR---LDTETEGVPSTAIREISLLKEL 66
Query: 663 HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILY 722
+H N+V L+ E + LV+EF+ L+ + A + + + S +G+ +
Sbjct: 67 NHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYLFQLLQGLAF 125
Query: 723 LHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPG 782
H+ V HRD+K N+L++ + K+ADFGL+R VP V + VV T
Sbjct: 126 CHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-----VRTYTHEVV--TLW 175
Query: 783 YLDPEYFLTHKLTDKS-DVYSLGVVFLELLT 812
Y PE L K + D++SLG +F E++T
Sbjct: 176 YRAPEILLGXKYYSTAVDIWSLGCIFAEMVT 206
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 103/211 (48%), Gaps = 21/211 (9%)
Query: 609 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKE-----FLTEIQFLSRL 662
NF +IG+G YG VYK G VVA+K+ + L E E + EI L L
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR---LDTETEGVPSTAIREISLLKEL 58
Query: 663 HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILY 722
+H N+V L+ E + LV+EF+ L+ + A + + + S +G+ +
Sbjct: 59 NHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYLFQLLQGLAF 117
Query: 723 LHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPG 782
H+ V HRD+K N+L++ + K+ADFGL+R VP V + VV T
Sbjct: 118 CHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-----VRTYTHEVV--TLW 167
Query: 783 YLDPEYFLTHKLTDKS-DVYSLGVVFLELLT 812
Y PE L K + D++SLG +F E++T
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 130/291 (44%), Gaps = 39/291 (13%)
Query: 606 LATNNFNSSTQIGQGGYGKVYKGI-LPDGTVV----AVKRAQEG-SLQGEKEFLTEIQFL 659
L F +G G +G VYKG+ +P+G V A+K +E S + KE L E +
Sbjct: 12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 71
Query: 660 SRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRG 719
+ + + ++ L+G C Q L+ + M G L D + + K+ +G L+ + ++G
Sbjct: 72 ASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVR-EHKDNIGSQYLLNWCVQIAKG 129
Query: 720 ILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE-----GIVPAHVS 774
+ YL D + HRD+ A N+L+ K+ DFGL++L + E G VP
Sbjct: 130 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK-- 184
Query: 775 TVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQS 833
++ E L T +SDV+S GV EL+T G +P +
Sbjct: 185 --------WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-----------GIPA 225
Query: 834 SMMFSVID-GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883
S + S+++ G P C + +KC + D+RP E++ E +
Sbjct: 226 SEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 276
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 130/291 (44%), Gaps = 39/291 (13%)
Query: 606 LATNNFNSSTQIGQGGYGKVYKGI-LPDGTVV----AVKRAQEG-SLQGEKEFLTEIQFL 659
L F +G G +G VYKG+ +P+G V A+K +E S + KE L E +
Sbjct: 37 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 96
Query: 660 SRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRG 719
+ + + ++ L+G C Q L+ + M G L D + + K+ +G L+ + ++G
Sbjct: 97 ASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVR-EHKDNIGSQYLLNWCVQIAKG 154
Query: 720 ILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE-----GIVPAHVS 774
+ YL D + HRD+ A N+L+ K+ DFGL++L + E G VP
Sbjct: 155 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK-- 209
Query: 775 TVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQS 833
++ E L T +SDV+S GV EL+T G +P +
Sbjct: 210 --------WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-----------GIPA 250
Query: 834 SMMFSVID-GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883
S + S+++ G P C + +KC + D+RP E++ E +
Sbjct: 251 SEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 301
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 130/291 (44%), Gaps = 39/291 (13%)
Query: 606 LATNNFNSSTQIGQGGYGKVYKGI-LPDGTVV----AVKRAQEG-SLQGEKEFLTEIQFL 659
L F +G G +G VYKG+ +P+G V A+K +E S + KE L E +
Sbjct: 12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 71
Query: 660 SRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRG 719
+ + + ++ L+G C Q L+ + M G L D + + K+ +G L+ + ++G
Sbjct: 72 ASVDNPHVCRLLGICLTSTVQ-LITQLMPFGXLLDYVR-EHKDNIGSQYLLNWCVQIAKG 129
Query: 720 ILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE-----GIVPAHVS 774
+ YL D + HRD+ A N+L+ K+ DFGL++L + E G VP
Sbjct: 130 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK-- 184
Query: 775 TVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQS 833
++ E L T +SDV+S GV EL+T G +P +
Sbjct: 185 --------WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-----------GIPA 225
Query: 834 SMMFSVID-GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883
S + S+++ G P C + +KC + D+RP E++ E +
Sbjct: 226 SEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 276
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 130/291 (44%), Gaps = 39/291 (13%)
Query: 606 LATNNFNSSTQIGQGGYGKVYKGI-LPDGTVV----AVKRAQEG-SLQGEKEFLTEIQFL 659
L F +G G +G VYKG+ +P+G V A+K +E S + KE L E +
Sbjct: 19 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 78
Query: 660 SRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRG 719
+ + + ++ L+G C Q L+ + M G L D + + K+ +G L+ + ++G
Sbjct: 79 ASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVR-EHKDNIGSQYLLNWCVQIAKG 136
Query: 720 ILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE-----GIVPAHVS 774
+ YL D + HRD+ A N+L+ K+ DFGL++L + E G VP
Sbjct: 137 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK-- 191
Query: 775 TVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQS 833
++ E L T +SDV+S GV EL+T G +P +
Sbjct: 192 --------WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-----------GIPA 232
Query: 834 SMMFSVID-GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883
S + S+++ G P C + +KC + D+RP E++ E +
Sbjct: 233 SEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 283
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 104/213 (48%), Gaps = 21/213 (9%)
Query: 607 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKE-----FLTEIQFLS 660
+ NF +IG+G YG VYK G VVA+K+ + L E E + EI L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR---LDTETEGVPSTAIREISLLK 57
Query: 661 RLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGI 720
L+H N+V L+ E + LV+EF+ L+ + A + + + S +G+
Sbjct: 58 ELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYLFQLLQGL 116
Query: 721 LYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGT 780
+ H+ V HRD+K N+L++ + K+ADFGL+R VP V + VV T
Sbjct: 117 AFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-----VRTYXHEVV--T 166
Query: 781 PGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLT 812
Y PE L K + D++SLG +F E++T
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 130/291 (44%), Gaps = 39/291 (13%)
Query: 606 LATNNFNSSTQIGQGGYGKVYKGI-LPDGTVV----AVKRAQEG-SLQGEKEFLTEIQFL 659
L F +G G +G VYKG+ +P+G V A+K +E S + KE L E +
Sbjct: 14 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 73
Query: 660 SRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRG 719
+ + + ++ L+G C Q L+ + M G L D + + K+ +G L+ + ++G
Sbjct: 74 ASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVR-EHKDNIGSQYLLNWCVQIAKG 131
Query: 720 ILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE-----GIVPAHVS 774
+ YL D + HRD+ A N+L+ K+ DFGL++L + E G VP
Sbjct: 132 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK-- 186
Query: 775 TVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQS 833
++ E L T +SDV+S GV EL+T G +P +
Sbjct: 187 --------WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-----------GIPA 227
Query: 834 SMMFSVID-GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883
S + S+++ G P C + +KC + D+RP E++ E +
Sbjct: 228 SEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 278
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 130/291 (44%), Gaps = 39/291 (13%)
Query: 606 LATNNFNSSTQIGQGGYGKVYKGI-LPDGTVV----AVKRAQEG-SLQGEKEFLTEIQFL 659
L F +G G +G VYKG+ +P+G V A+K +E S + KE L E +
Sbjct: 15 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 74
Query: 660 SRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRG 719
+ + + ++ L+G C Q L+ + M G L D + + K+ +G L+ + ++G
Sbjct: 75 ASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVR-EHKDNIGSQYLLNWCVQIAKG 132
Query: 720 ILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE-----GIVPAHVS 774
+ YL D + HRD+ A N+L+ K+ DFGL++L + E G VP
Sbjct: 133 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK-- 187
Query: 775 TVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQS 833
++ E L T +SDV+S GV EL+T G +P +
Sbjct: 188 --------WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-----------GIPA 228
Query: 834 SMMFSVID-GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883
S + S+++ G P C + +KC + D+RP E++ E +
Sbjct: 229 SEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 279
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 104/213 (48%), Gaps = 21/213 (9%)
Query: 607 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKE-----FLTEIQFLS 660
+ NF +IG+G YG VYK G VVA+K+ + L E E + EI L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR---LDTETEGVPSTAIREISLLK 58
Query: 661 RLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGI 720
L+H N+V L+ E + LV+EF+ L+ + A + + + S +G+
Sbjct: 59 ELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYLFQLLQGL 117
Query: 721 LYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGT 780
+ H+ V HRD+K N+L++ + K+ADFGL+R VP V + VV T
Sbjct: 118 AFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-----VRTYTHEVV--T 167
Query: 781 PGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLT 812
Y PE L K + D++SLG +F E++T
Sbjct: 168 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 103/211 (48%), Gaps = 21/211 (9%)
Query: 609 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKE-----FLTEIQFLSRL 662
NF +IG+G YG VYK G VVA+K+ + L E E + EI L L
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR---LDTETEGVPSTAIREISLLKEL 59
Query: 663 HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILY 722
+H N+V L+ E + LV+EF+ L+ + A + + + S +G+ +
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 723 LHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPG 782
H+ V HRD+K N+L++ + K+ADFGL+R VP V + VV T
Sbjct: 119 CHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-----VRTYTHEVV--TLW 168
Query: 783 YLDPEYFLTHKLTDKS-DVYSLGVVFLELLT 812
Y PE L K + D++SLG +F E++T
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 103/211 (48%), Gaps = 21/211 (9%)
Query: 609 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKE-----FLTEIQFLSRL 662
NF +IG+G YG VYK G VVA+K+ + L E E + EI L L
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR---LDTETEGVPSTAIREISLLKEL 58
Query: 663 HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILY 722
+H N+V L+ E + LV+EF+ L+ + A + + + S +G+ +
Sbjct: 59 NHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYLFQLLQGLAF 117
Query: 723 LHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPG 782
H+ V HRD+K N+L++ + K+ADFGL+R VP V + VV T
Sbjct: 118 CHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-----VRTYTHEVV--TLW 167
Query: 783 YLDPEYFLTHKLTDKS-DVYSLGVVFLELLT 812
Y PE L K + D++SLG +F E++T
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 130/291 (44%), Gaps = 39/291 (13%)
Query: 606 LATNNFNSSTQIGQGGYGKVYKGI-LPDGTVV----AVKRAQEG-SLQGEKEFLTEIQFL 659
L F +G G +G VYKG+ +P+G V A+K +E S + KE L E +
Sbjct: 18 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 77
Query: 660 SRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRG 719
+ + + ++ L+G C Q L+ + M G L D + + K+ +G L+ + ++G
Sbjct: 78 ASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVR-EHKDNIGSQYLLNWCVQIAKG 135
Query: 720 ILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE-----GIVPAHVS 774
+ YL D + HRD+ A N+L+ K+ DFGL++L + E G VP
Sbjct: 136 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK-- 190
Query: 775 TVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQS 833
++ E L T +SDV+S GV EL+T G +P +
Sbjct: 191 --------WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-----------GIPA 231
Query: 834 SMMFSVID-GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883
S + S+++ G P C + +KC + D+RP E++ E +
Sbjct: 232 SEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 282
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 104/213 (48%), Gaps = 21/213 (9%)
Query: 607 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKE-----FLTEIQFLS 660
+ NF +IG+G YG VYK G VVA+K+ + L E E + EI L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR---LDTETEGVPSTAIREISLLK 57
Query: 661 RLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGI 720
L+H N+V L+ E + LV+EF+ L+ + A + + + S +G+
Sbjct: 58 ELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYLFQLLQGL 116
Query: 721 LYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGT 780
+ H+ V HRD+K N+L++ + K+ADFGL+R VP V + VV T
Sbjct: 117 AFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-----VRTYXHEVV--T 166
Query: 781 PGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLT 812
Y PE L K + D++SLG +F E++T
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 81.3 bits (199), Expect = 2e-15, Method: Composition-based stats.
Identities = 77/314 (24%), Positives = 132/314 (42%), Gaps = 61/314 (19%)
Query: 610 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLV 668
+F IG GG+G+V+K DG ++R + + + E+E ++ L++L H N+V
Sbjct: 13 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAERE----VKALAKLDHVNIV 68
Query: 669 SLVG------YCDEEGEQML-----------------------VYEFMSNGTLRDQLSAK 699
G Y E + L EF GTL + +
Sbjct: 69 HYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKR 128
Query: 700 SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRL 759
E L + L + ++G+ Y+H++ + HRD+K SNI L K+ DFGL
Sbjct: 129 RGEKLDKVLALELFEQITKGVDYIHSKK---LIHRDLKPSNIFLVDTKQVKIGDFGL--- 182
Query: 760 APVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISH 819
+ + T KGT Y+ PE + + D+Y+LG++ ELL
Sbjct: 183 -----VTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL-------- 229
Query: 820 GKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRE 879
+ A+++S F+ + + S + EK L K + + RP+ SE++R
Sbjct: 230 -----HVCDTAFETSKFFTDLRDGIISDIFDKKEK--TLLQKLLSKKPEDRPNTSEILRT 282
Query: 880 LESIWNMMPESDTK 893
L ++W PE + +
Sbjct: 283 L-TVWKKSPEKNER 295
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 104/213 (48%), Gaps = 21/213 (9%)
Query: 607 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKE-----FLTEIQFLS 660
+ NF +IG+G YG VYK G VVA+K+ + L E E + EI L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR---LDTETEGVPSTAIREISLLK 57
Query: 661 RLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGI 720
L+H N+V L+ E + LV+EF+ L+ + A + + + S +G+
Sbjct: 58 ELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYLFQLLQGL 116
Query: 721 LYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGT 780
+ H+ V HRD+K N+L++ + K+ADFGL+R VP V + VV T
Sbjct: 117 AFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-----VRTYXHEVV--T 166
Query: 781 PGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLT 812
Y PE L K + D++SLG +F E++T
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 103/211 (48%), Gaps = 21/211 (9%)
Query: 609 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKE-----FLTEIQFLSRL 662
NF +IG+G YG VYK G VVA+K+ + L E E + EI L L
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR---LDTETEGVPSTAIREISLLKEL 58
Query: 663 HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILY 722
+H N+V L+ E + LV+EF+ L+ + A + + + S +G+ +
Sbjct: 59 NHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYLFQLLQGLAF 117
Query: 723 LHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPG 782
H+ V HRD+K N+L++ + K+ADFGL+R VP V + VV T
Sbjct: 118 CHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-----VRTYXHEVV--TLW 167
Query: 783 YLDPEYFLTHKLTDKS-DVYSLGVVFLELLT 812
Y PE L K + D++SLG +F E++T
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 103/211 (48%), Gaps = 21/211 (9%)
Query: 609 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKE-----FLTEIQFLSRL 662
NF +IG+G YG VYK G VVA+K+ + L E E + EI L L
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR---LDTETEGVPSTAIREISLLKEL 59
Query: 663 HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILY 722
+H N+V L+ E + LV+EF+ L+ + A + + + S +G+ +
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 723 LHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPG 782
H+ V HRD+K N+L++ + K+ADFGL+R VP V + VV T
Sbjct: 119 CHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-----VRTYTHEVV--TLW 168
Query: 783 YLDPEYFLTHKLTDKS-DVYSLGVVFLELLT 812
Y PE L K + D++SLG +F E++T
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 104/213 (48%), Gaps = 21/213 (9%)
Query: 607 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKE-----FLTEIQFLS 660
+ NF +IG+G YG VYK G VVA+K+ + L E E + EI L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR---LDTETEGVPSTAIREISLLK 60
Query: 661 RLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGI 720
L+H N+V L+ E + LV+EF+ L+ + A + + + S +G+
Sbjct: 61 ELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYLFQLLQGL 119
Query: 721 LYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGT 780
+ H+ V HRD+K N+L++ + K+ADFGL+R VP V + VV T
Sbjct: 120 AFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-----VRTYXHEVV--T 169
Query: 781 PGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLT 812
Y PE L K + D++SLG +F E++T
Sbjct: 170 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 104/213 (48%), Gaps = 21/213 (9%)
Query: 607 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKE-----FLTEIQFLS 660
+ NF +IG+G YG VYK G VVA+K+ + L E E + EI L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR---LDTETEGVPSTAIREISLLK 59
Query: 661 RLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGI 720
L+H N+V L+ E + LV+EF+ L+ + A + + + S +G+
Sbjct: 60 ELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYLFQLLQGL 118
Query: 721 LYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGT 780
+ H+ V HRD+K N+L++ + K+ADFGL+R VP V + VV T
Sbjct: 119 AFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-----VRTYXHEVV--T 168
Query: 781 PGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLT 812
Y PE L K + D++SLG +F E++T
Sbjct: 169 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 103/211 (48%), Gaps = 21/211 (9%)
Query: 609 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKE-----FLTEIQFLSRL 662
NF +IG+G YG VYK G VVA+K+ + L E E + EI L L
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR---LDTETEGVPSTAIREISLLKEL 63
Query: 663 HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILY 722
+H N+V L+ E + LV+EF+ L+ + A + + + S +G+ +
Sbjct: 64 NHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYLFQLLQGLAF 122
Query: 723 LHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPG 782
H+ V HRD+K N+L++ + K+ADFGL+R VP V + VV T
Sbjct: 123 CHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-----VRTYTHEVV--TLW 172
Query: 783 YLDPEYFLTHKLTDKS-DVYSLGVVFLELLT 812
Y PE L K + D++SLG +F E++T
Sbjct: 173 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 203
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 104/213 (48%), Gaps = 21/213 (9%)
Query: 607 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKE-----FLTEIQFLS 660
+ NF +IG+G YG VYK G VVA+K+ + L E E + EI L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR---LDTETEGVPSTAIREISLLK 57
Query: 661 RLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGI 720
L+H N+V L+ E + LV+EF+ L+ + A + + + S +G+
Sbjct: 58 ELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYLFQLLQGL 116
Query: 721 LYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGT 780
+ H+ V HRD+K N+L++ + K+ADFGL+R VP V + VV T
Sbjct: 117 AFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-----VRTYXHEVV--T 166
Query: 781 PGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLT 812
Y PE L K + D++SLG +F E++T
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 103/211 (48%), Gaps = 21/211 (9%)
Query: 609 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKE-----FLTEIQFLSRL 662
NF +IG+G YG VYK G VVA+K+ + L E E + EI L L
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR---LDTETEGVPSTAIREISLLKEL 66
Query: 663 HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILY 722
+H N+V L+ E + LV+EF+ L+ + A + + + S +G+ +
Sbjct: 67 NHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYLFQLLQGLAF 125
Query: 723 LHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPG 782
H+ V HRD+K N+L++ + K+ADFGL+R VP V + VV T
Sbjct: 126 CHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-----VRTYTHEVV--TLW 175
Query: 783 YLDPEYFLTHKLTDKS-DVYSLGVVFLELLT 812
Y PE L K + D++SLG +F E++T
Sbjct: 176 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 206
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 104/213 (48%), Gaps = 21/213 (9%)
Query: 607 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKE-----FLTEIQFLS 660
+ NF +IG+G YG VYK G VVA+K+ + L E E + EI L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR---LDTETEGVPSTAIREISLLK 59
Query: 661 RLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGI 720
L+H N+V L+ E + LV+EF+ L+ + A + + + S +G+
Sbjct: 60 ELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYLFQLLQGL 118
Query: 721 LYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGT 780
+ H+ V HRD+K N+L++ + K+ADFGL+R VP V + VV T
Sbjct: 119 AFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVP-----VRTYXHEVV--T 168
Query: 781 PGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLT 812
Y PE L K + D++SLG +F E++T
Sbjct: 169 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 103/211 (48%), Gaps = 21/211 (9%)
Query: 609 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKE-----FLTEIQFLSRL 662
NF +IG+G YG VYK G VVA+K+ + L E E + EI L L
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR---LDTETEGVPSTAIREISLLKEL 58
Query: 663 HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILY 722
+H N+V L+ E + LV+EF+ L+ + A + + + S +G+ +
Sbjct: 59 NHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYLFQLLQGLAF 117
Query: 723 LHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPG 782
H+ V HRD+K N+L++ + K+ADFGL+R VP V + VV T
Sbjct: 118 CHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-----VRTYXHEVV--TLW 167
Query: 783 YLDPEYFLTHKLTDKS-DVYSLGVVFLELLT 812
Y PE L K + D++SLG +F E++T
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 104/213 (48%), Gaps = 21/213 (9%)
Query: 607 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKE-----FLTEIQFLS 660
+ NF +IG+G YG VYK G VVA+K+ + L E E + EI L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR---LDTETEGVPSTAIREISLLK 59
Query: 661 RLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGI 720
L+H N+V L+ E + LV+EF+ L+ + A + + + S +G+
Sbjct: 60 ELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYLFQLLQGL 118
Query: 721 LYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGT 780
+ H+ V HRD+K N+L++ + K+ADFGL+R VP V + VV T
Sbjct: 119 AFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-----VRTYXHEVV--T 168
Query: 781 PGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLT 812
Y PE L K + D++SLG +F E++T
Sbjct: 169 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 124/269 (46%), Gaps = 25/269 (9%)
Query: 617 IGQ-GGYGKVYKGILPDGTVVAVKRAQEGSLQGEKE-FLTEIQFLSRLHHRNLVSLVGYC 674
IG+ G +GKVYK + +V+A + + + E E ++ EI L+ H N+V L+
Sbjct: 17 IGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 76
Query: 675 DEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHR 734
E ++ EF + G + D + + + PL + + + + YLH D + HR
Sbjct: 77 YYENNLWILIEFCAGGAV-DAVMLELERPLTESQIQVVCKQTLDALNYLH---DNKIIHR 132
Query: 735 DIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKL 794
D+KA NIL K+ADFG+S + + S + GTP ++ PE +
Sbjct: 133 DLKAGNILFTLDGDIKLADFGVS----AKNTRTXIQRRDSFI--GTPYWMAPEVVMCETS 186
Query: 795 TD-----KSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPS 849
D K+DV+SLG+ +E + ++P H N +R + + + + + PS
Sbjct: 187 KDRPYDYKADVWSLGITLIE-MAEIEPPHHELNPMRVL-------LKIAKSEPPTLAQPS 238
Query: 850 ECVEKFIKLALKCCQDETDARPSMSEVMR 878
F KC + DAR + S++++
Sbjct: 239 RWSSNFKDFLKKCLEKNVDARWTTSQLLQ 267
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 104/213 (48%), Gaps = 21/213 (9%)
Query: 607 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKE-----FLTEIQFLS 660
+ NF +IG+G YG VYK G VVA+K+ + L E E + EI L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR---LDTETEGVPSTAIREISLLK 60
Query: 661 RLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGI 720
L+H N+V L+ E + LV+EF+ L+ + A + + + S +G+
Sbjct: 61 ELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYLFQLLQGL 119
Query: 721 LYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGT 780
+ H+ V HRD+K N+L++ + K+ADFGL+R VP V + VV T
Sbjct: 120 AFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-----VRTYXHEVV--T 169
Query: 781 PGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLT 812
Y PE L K + D++SLG +F E++T
Sbjct: 170 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 104/213 (48%), Gaps = 21/213 (9%)
Query: 607 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKE-----FLTEIQFLS 660
+ NF +IG+G YG VYK G VVA+K+ + L E E + EI L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR---LDTETEGVPSTAIREISLLK 58
Query: 661 RLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGI 720
L+H N+V L+ E + LV+EF+ L+ + A + + + S +G+
Sbjct: 59 ELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYLFQLLQGL 117
Query: 721 LYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGT 780
+ H+ V HRD+K N+L++ + K+ADFGL+R VP V + VV T
Sbjct: 118 AFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVP-----VRTYXHEVV--T 167
Query: 781 PGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLT 812
Y PE L K + D++SLG +F E++T
Sbjct: 168 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 104/213 (48%), Gaps = 21/213 (9%)
Query: 607 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKE-----FLTEIQFLS 660
+ NF +IG+G YG VYK G VVA+K+ + L E E + EI L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR---LDTETEGVPSTAIREISLLK 58
Query: 661 RLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGI 720
L+H N+V L+ E + LV+EF+ L+ + A + + + S +G+
Sbjct: 59 ELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYLFQLLQGL 117
Query: 721 LYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGT 780
+ H+ V HRD+K N+L++ + K+ADFGL+R VP V + VV T
Sbjct: 118 AFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-----VRTYXHEVV--T 167
Query: 781 PGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLT 812
Y PE L K + D++SLG +F E++T
Sbjct: 168 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 130/296 (43%), Gaps = 38/296 (12%)
Query: 609 NNFNSSTQIGQGGYGKVYK----GILPDGTV--VAVKRAQEGSLQGEKE-FLTEIQFLSR 661
NN +G G +GKV + G+ + V VAVK + + EKE ++E++ +S
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 662 L-HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALG----- 715
L H N+V+L+G C G +++ E+ G L + L + K P G + +
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFL--RRKRPPGLEYSYNPSHNPEEQL 163
Query: 716 SSRGILYLHTE--------ADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEG 767
SSR +L+ ++ A HRD+ A N+LL + AK+ DFGL+R + D
Sbjct: 164 SSRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR-DIMNDSNY 222
Query: 768 IVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVRE 826
IV + VK ++ PE T +SDV+S G++ E+ + G+ P
Sbjct: 223 IVKGNARLPVK----WMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYP-------- 270
Query: 827 VNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELES 882
I S V DG + P+ + + C E RP+ ++ L+
Sbjct: 271 -GILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQE 325
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 104/213 (48%), Gaps = 21/213 (9%)
Query: 607 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKE-----FLTEIQFLS 660
+ NF +IG+G YG VYK G VVA+K+ + L E E + EI L
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR---LDTETEGVPSTAIREISLLK 61
Query: 661 RLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGI 720
L+H N+V L+ E + LV+EF+ L+ + A + + + S +G+
Sbjct: 62 ELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYLFQLLQGL 120
Query: 721 LYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGT 780
+ H+ V HRD+K N+L++ + K+ADFGL+R VP V + VV T
Sbjct: 121 AFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-----VRTYXHEVV--T 170
Query: 781 PGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLT 812
Y PE L K + D++SLG +F E++T
Sbjct: 171 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 203
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 103/211 (48%), Gaps = 21/211 (9%)
Query: 609 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKE-----FLTEIQFLSRL 662
NF +IG+G YG VYK G VVA+K+ + L E E + EI L L
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR---LDTETEGVPSTAIREISLLKEL 60
Query: 663 HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILY 722
+H N+V L+ E + LV+EF+ L+ + A + + + S +G+ +
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYLFQLLQGLAF 119
Query: 723 LHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPG 782
H+ V HRD+K N+L++ + K+ADFGL+R VP V + VV T
Sbjct: 120 CHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-----VRTYXHEVV--TLW 169
Query: 783 YLDPEYFLTHKLTDKS-DVYSLGVVFLELLT 812
Y PE L K + D++SLG +F E++T
Sbjct: 170 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 104/213 (48%), Gaps = 21/213 (9%)
Query: 607 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKE-----FLTEIQFLS 660
+ NF +IG+G YG VYK G VVA+K+ + L E E + EI L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR---LDTETEGVPSTAIREISLLK 60
Query: 661 RLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGI 720
L+H N+V L+ E + LV+EF+ L+ + A + + + S +G+
Sbjct: 61 ELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKTFMDASALTGIPLPLIKSYLFQLLQGL 119
Query: 721 LYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGT 780
+ H+ V HRD+K N+L++ + K+ADFGL+R VP V + VV T
Sbjct: 120 AFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-----VRTYXHEVV--T 169
Query: 781 PGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLT 812
Y PE L K + D++SLG +F E++T
Sbjct: 170 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 103/211 (48%), Gaps = 21/211 (9%)
Query: 609 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKE-----FLTEIQFLSRL 662
NF +IG+G YG VYK G VVA+K+ + L E E + EI L L
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR---LDTETEGVPSTAIREISLLKEL 59
Query: 663 HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILY 722
+H N+V L+ E + LV+EF+ L+ + A + + + S +G+ +
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYLFQLLQGLSF 118
Query: 723 LHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPG 782
H+ V HRD+K N+L++ + K+ADFGL+R VP V + VV T
Sbjct: 119 CHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-----VRTYTHEVV--TLW 168
Query: 783 YLDPEYFLTHKLTDKS-DVYSLGVVFLELLT 812
Y PE L K + D++SLG +F E++T
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 117/286 (40%), Gaps = 40/286 (13%)
Query: 607 ATNNFNSSTQIGQGGYGKVYKGILPDGT-VVAVK---RAQEGSLQGEKEFLTEIQFLSRL 662
A +F +G+G +G VY ++A+K +AQ E + E++ S L
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 663 HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSK----EPLGFAMRLSIALGSSR 718
H N++ L GY + L+ E+ GT+ +L SK + L+ AL
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS--- 148
Query: 719 GILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVK 778
Y H++ V HRDIK N+LL K+ADFG S A P+ T +
Sbjct: 149 ---YCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHA---------PSSRRTTLC 193
Query: 779 GTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFS 838
GT YL PE +K D++SLGV+ E L G P E N ++ S
Sbjct: 194 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--------EANTYQETYKRIS 245
Query: 839 VIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIW 884
++ + +E I LK RP + EV LE W
Sbjct: 246 RVEFTFPDFVTEGARDLISRLLK---HNPSQRPMLREV---LEHPW 285
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 118/291 (40%), Gaps = 40/291 (13%)
Query: 602 GEMALATNNFNSSTQIGQGGYGKVYKGILPDGT-VVAVK---RAQEGSLQGEKEFLTEIQ 657
G A +F +G+G +G VY ++A+K +AQ E + E++
Sbjct: 1 GPRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 60
Query: 658 FLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSK----EPLGFAMRLSIA 713
S L H N++ L GY + L+ E+ GT+ +L SK + L+ A
Sbjct: 61 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 120
Query: 714 LGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHV 773
L Y H++ V HRDIK N+LL K+ADFG S A P+
Sbjct: 121 LS------YCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHA---------PSSR 162
Query: 774 STVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQS 833
T + GT YL PE +K D++SLGV+ E L G P E N ++
Sbjct: 163 RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--------EANTYQET 214
Query: 834 SMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIW 884
S ++ + +E I LK RP + EV LE W
Sbjct: 215 YKRISRVEFTFPDFVTEGARDLISRLLK---HNPSQRPMLREV---LEHPW 259
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 119/291 (40%), Gaps = 40/291 (13%)
Query: 602 GEMALATNNFNSSTQIGQGGYGKVYKGILPDGT-VVAVK---RAQEGSLQGEKEFLTEIQ 657
G+ A +F +G+G +G VY ++A+K +AQ E + E++
Sbjct: 1 GKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 60
Query: 658 FLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSK----EPLGFAMRLSIA 713
S L H N++ L GY + L+ E+ GT+ +L SK + L+ A
Sbjct: 61 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 120
Query: 714 LGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHV 773
L Y H++ V HRDIK N+LL K+ADFG S A P+
Sbjct: 121 LS------YCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHA---------PSSR 162
Query: 774 STVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQS 833
T + GT YL PE +K D++SLGV+ E L G P E N ++
Sbjct: 163 RTXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--------EANTYQET 214
Query: 834 SMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIW 884
S ++ + +E I LK RP + EV LE W
Sbjct: 215 YKRISRVEFTFPDFVTEGARDLISRLLK---HNPSQRPMLREV---LEHPW 259
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 128/304 (42%), Gaps = 51/304 (16%)
Query: 617 IGQGGYGKVYK----GILPDGTV--VAVKRAQEGSLQGE-KEFLTEIQFLSRL-HHRNLV 668
+G+G +G+V + GI T VAVK +EG+ E + ++E++ L + HH N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 669 SLVGYCDEEG-EQMLVYEFMSNGTLRDQLSAKS--------------KEPLGFAMRLSIA 713
+L+G C + G M++ EF G L L +K K+ L + +
Sbjct: 86 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 714 LGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSR-LAPVPDIEGIVPAH 772
++G+ +L A HRD+ A NILL K K+ DFGL+R + PD
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPD-------- 194
Query: 773 VSTVVKGTP----GYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREV 827
V KG ++ PE T +SDV+S GV+ E+ + G P
Sbjct: 195 --XVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP--------- 243
Query: 828 NIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMM 887
+ + +G P + + L C E RP+ SE++ L ++
Sbjct: 244 GVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 303
Query: 888 PESD 891
+ D
Sbjct: 304 AQQD 307
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 132/299 (44%), Gaps = 43/299 (14%)
Query: 602 GEMAL----ATNNFNSSTQIGQGGYGKVYKGI-LPDGTVV----AVKRAQEG-SLQGEKE 651
G MAL F +G G +G VYKG+ +P+G V A+K +E S + KE
Sbjct: 1 GAMALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 60
Query: 652 FLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLS 711
L E ++ + + ++ L+G C Q L+ + M G L D + + K+ +G L+
Sbjct: 61 ILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVR-EHKDNIGSQYLLN 118
Query: 712 IALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE----- 766
+ + G+ YL D + HRD+ A N+L+ K+ DFGL++L + E
Sbjct: 119 WCVQIAEGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 175
Query: 767 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVR 825
G VP ++ E L T +SDV+S GV EL+T G +P
Sbjct: 176 GKVPIK----------WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD------- 218
Query: 826 EVNIAYQSSMMFSVID-GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883
+S + S+++ G P C + +KC + D+RP E++ E +
Sbjct: 219 ----GIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 273
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 117/286 (40%), Gaps = 40/286 (13%)
Query: 607 ATNNFNSSTQIGQGGYGKVYKGILPDGT-VVAVK---RAQEGSLQGEKEFLTEIQFLSRL 662
A +F +G+G +G VY ++A+K +AQ E + E++ S L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 663 HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSK----EPLGFAMRLSIALGSSR 718
H N++ L GY + L+ E+ GT+ +L SK + L+ AL
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS--- 123
Query: 719 GILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVK 778
Y H++ V HRDIK N+LL K+ADFG S AP + T +
Sbjct: 124 ---YCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSCHAP---------SSRRTTLS 168
Query: 779 GTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFS 838
GT YL PE +K D++SLGV+ E L G P E N ++ S
Sbjct: 169 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--------EANTYQETYKRIS 220
Query: 839 VIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIW 884
++ + +E I LK RP + EV LE W
Sbjct: 221 RVEFTFPDFVTEGARDLISRLLK---HNPSQRPMLREV---LEHPW 260
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 80.5 bits (197), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 129/291 (44%), Gaps = 39/291 (13%)
Query: 606 LATNNFNSSTQIGQGGYGKVYKGI-LPDGTVV----AVKRAQEG-SLQGEKEFLTEIQFL 659
L F +G G +G VYKG+ +P+G V A+K +E S + KE L E +
Sbjct: 15 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 74
Query: 660 SRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRG 719
+ + + ++ L+G C Q L+ + M G L D + + K+ +G L+ + ++G
Sbjct: 75 ASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVR-EHKDNIGSQYLLNWCVQIAKG 132
Query: 720 ILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE-----GIVPAHVS 774
+ YL D + HRD+ A N+L+ K+ DFGL++L + E G VP
Sbjct: 133 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK-- 187
Query: 775 TVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQS 833
++ E L T +SDV+S GV EL+T G +P +
Sbjct: 188 --------WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-----------GIPA 228
Query: 834 SMMFSVID-GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883
S + S+++ G P C + KC + D+RP E++ E +
Sbjct: 229 SEISSILEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKM 279
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 80.5 bits (197), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 129/291 (44%), Gaps = 39/291 (13%)
Query: 606 LATNNFNSSTQIGQGGYGKVYKGI-LPDGTVV----AVKRAQEG-SLQGEKEFLTEIQFL 659
L F +G G +G VYKG+ +P+G V A+K +E S + KE L E +
Sbjct: 22 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 81
Query: 660 SRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRG 719
+ + + ++ L+G C Q L+ + M G L D + + K+ +G L+ + ++G
Sbjct: 82 ASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVR-EHKDNIGSQYLLNWCVQIAKG 139
Query: 720 ILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE-----GIVPAHVS 774
+ YL D + HRD+ A N+L+ K+ DFGL++L + E G VP
Sbjct: 140 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK-- 194
Query: 775 TVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQS 833
++ E L T +SDV+S GV EL+T G +P +
Sbjct: 195 --------WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-----------GIPA 235
Query: 834 SMMFSVID-GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883
S + S+++ G P C + KC + D+RP E++ E +
Sbjct: 236 SEISSILEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKM 286
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 129/291 (44%), Gaps = 39/291 (13%)
Query: 606 LATNNFNSSTQIGQGGYGKVYKGI-LPDGTVV----AVKRAQEG-SLQGEKEFLTEIQFL 659
L F +G G +G VYKG+ +P+G V A+K +E S + KE L E +
Sbjct: 12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 71
Query: 660 SRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRG 719
+ + + ++ L+G C Q L+ + M G L D + + K+ +G L+ + ++G
Sbjct: 72 ASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVR-EHKDNIGSQYLLNWCVQIAKG 129
Query: 720 ILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE-----GIVPAHVS 774
+ YL D + HRD+ A N+L+ K+ DFGL++L + E G VP
Sbjct: 130 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK-- 184
Query: 775 TVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQS 833
++ E L T +SDV+S GV EL+T G +P +
Sbjct: 185 --------WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-----------GIPA 225
Query: 834 SMMFSVID-GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883
S + S+++ G P C + KC + D+RP E++ E +
Sbjct: 226 SEISSILEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKM 276
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 128/302 (42%), Gaps = 49/302 (16%)
Query: 617 IGQGGYGKVYK----GILPDGT--VVAVKRAQEGSLQGE-KEFLTEIQFLSRL-HHRNLV 668
+G+G +G+V + GI T VAVK +EG+ E + ++E++ L + HH N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 669 SLVGYCDEEG-EQMLVYEFMSNGTLRDQLSAKS------------KEPLGFAMRLSIALG 715
+L+G C + G M++ EF G L L +K K+ L + +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQ 156
Query: 716 SSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSR-LAPVPDIEGIVPAHVS 774
++G+ +L A HRD+ A NILL K K+ DFGL+R + PD
Sbjct: 157 VAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPD---------- 203
Query: 775 TVVKGTP----GYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNI 829
V KG ++ PE T +SDV+S GV+ E+ + G P +
Sbjct: 204 XVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP---------GV 254
Query: 830 AYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPE 889
+ +G P + + L C E RP+ SE++ L ++ +
Sbjct: 255 KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQ 314
Query: 890 SD 891
D
Sbjct: 315 QD 316
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 128/304 (42%), Gaps = 51/304 (16%)
Query: 617 IGQGGYGKVYK----GILPDGTV--VAVKRAQEGSLQGE-KEFLTEIQFLSRL-HHRNLV 668
+G+G +G+V + GI T VAVK +EG+ E + ++E++ L + HH N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 669 SLVGYCDEEG-EQMLVYEFMSNGTLRDQLSAKS--------------KEPLGFAMRLSIA 713
+L+G C + G M++ EF G L L +K K+ L + +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 714 LGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSR-LAPVPDIEGIVPAH 772
++G+ +L A HRD+ A NILL K K+ DFGL+R + PD
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPD-------- 194
Query: 773 VSTVVKGTP----GYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREV 827
V KG ++ PE T +SDV+S GV+ E+ + G P
Sbjct: 195 --XVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP--------- 243
Query: 828 NIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMM 887
+ + +G P + + L C E RP+ SE++ L ++
Sbjct: 244 GVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 303
Query: 888 PESD 891
+ D
Sbjct: 304 AQQD 307
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 128/304 (42%), Gaps = 51/304 (16%)
Query: 617 IGQGGYGKVYK----GILPDGTV--VAVKRAQEGSLQGE-KEFLTEIQFLSRL-HHRNLV 668
+G+G +G+V + GI T VAVK +EG+ E + ++E++ L + HH N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 669 SLVGYCDEEG-EQMLVYEFMSNGTLRDQLSAKS--------------KEPLGFAMRLSIA 713
+L+G C + G M++ EF G L L +K K+ L + +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 714 LGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSR-LAPVPDIEGIVPAH 772
++G+ +L A HRD+ A NILL K K+ DFGL+R + PD
Sbjct: 155 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPD-------- 203
Query: 773 VSTVVKGTP----GYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREV 827
V KG ++ PE T +SDV+S GV+ E+ + G P
Sbjct: 204 --XVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP--------- 252
Query: 828 NIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMM 887
+ + +G P + + L C E RP+ SE++ L ++
Sbjct: 253 GVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 312
Query: 888 PESD 891
+ D
Sbjct: 313 AQQD 316
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 80.1 bits (196), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 117/286 (40%), Gaps = 40/286 (13%)
Query: 607 ATNNFNSSTQIGQGGYGKVYKGILPDGT-VVAVK---RAQEGSLQGEKEFLTEIQFLSRL 662
A +F +G+G +G VY ++A+K +AQ E + E++ S L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 663 HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSK----EPLGFAMRLSIALGSSR 718
H N++ L GY + L+ E+ GT+ +L SK + L+ AL
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS--- 125
Query: 719 GILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVK 778
Y H++ V HRDIK N+LL K+ADFG S A P+ T +
Sbjct: 126 ---YCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHA---------PSSRRTTLC 170
Query: 779 GTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFS 838
GT YL PE +K D++SLGV+ E L G P E N ++ S
Sbjct: 171 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--------EANTYQETYKRIS 222
Query: 839 VIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIW 884
++ + +E I LK RP + EV LE W
Sbjct: 223 RVEFTFPDFVTEGARDLISRLLK---HNPSQRPMLREV---LEHPW 262
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 80.1 bits (196), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 127/289 (43%), Gaps = 39/289 (13%)
Query: 617 IGQGGYGKVYKGIL-PDG----TVVAVKRAQ-EGSLQGEKEFLTEIQFLSRLHHRNLVSL 670
+G+G +GKV P+G VAVK + E + EI+ L L+H N+V
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 671 VGYCDEEGEQ--MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEAD 728
G C E+G L+ EF+ +G+L++ L K+K + +L A+ +G+ YL +
Sbjct: 77 KGICTEDGGNGIKLIMEFLPSGSLKEYL-PKNKNKINLKQQLKYAVQICKGMDYLGSRQ- 134
Query: 729 PPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEY 788
HRD+ A N+L++ + K+ DFGL++ V + V + PE
Sbjct: 135 --YVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPV----FWYAPEC 188
Query: 789 FLTHKLTDKSDVYSLGVVFLELLT-------------GMQPISHGK-NIVREVNIAYQSS 834
+ K SDV+S GV ELLT M +HG+ + R VN
Sbjct: 189 LMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVN------ 242
Query: 835 MMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883
++ +G P C ++ +L KC + + R S ++ E++
Sbjct: 243 ---TLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEAL 288
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 80.1 bits (196), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 110/232 (47%), Gaps = 19/232 (8%)
Query: 607 ATNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGE-KEFLTEIQFLSRLHH 664
+++ F ++G G Y VYKG+ G VA+K + S +G + EI + L H
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKH 62
Query: 665 RNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKS--KEPLGFAMRLSIALGSS--RGI 720
N+V L E + LV+EFM N L+ + +++ P G + L +G+
Sbjct: 63 ENIVRLYDVIHTENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGL 121
Query: 721 LYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGT 780
+ H + HRD+K N+L++ + K+ DFGL+R +P V S VV T
Sbjct: 122 AFCHENK---ILHRDLKPQNLLINKRGQLKLGDFGLARAFGIP-----VNTFSSEVV--T 171
Query: 781 PGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLTGMQPISHGKNIVREVNIAY 831
Y P+ + + S D++S G + E++TG +P+ G N ++ + +
Sbjct: 172 LWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITG-KPLFPGTNDEEQLKLIF 222
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 127/289 (43%), Gaps = 39/289 (13%)
Query: 617 IGQGGYGKVYKGIL-PDG----TVVAVKRAQ-EGSLQGEKEFLTEIQFLSRLHHRNLVSL 670
+G+G +GKV P+G VAVK + E + EI+ L L+H N+V
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 671 VGYCDEEGEQ--MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEAD 728
G C E+G L+ EF+ +G+L++ L K+K + +L A+ +G+ YL +
Sbjct: 89 KGICTEDGGNGIKLIMEFLPSGSLKEYL-PKNKNKINLKQQLKYAVQICKGMDYLGSRQ- 146
Query: 729 PPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEY 788
HRD+ A N+L++ + K+ DFGL++ V + V + PE
Sbjct: 147 --YVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPV----FWYAPEC 200
Query: 789 FLTHKLTDKSDVYSLGVVFLELLT-------------GMQPISHGK-NIVREVNIAYQSS 834
+ K SDV+S GV ELLT M +HG+ + R VN
Sbjct: 201 LMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVN------ 254
Query: 835 MMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883
++ +G P C ++ +L KC + + R S ++ E++
Sbjct: 255 ---TLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEAL 300
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 129/291 (44%), Gaps = 39/291 (13%)
Query: 606 LATNNFNSSTQIGQGGYGKVYKGI-LPDGTVV----AVKRAQEG-SLQGEKEFLTEIQFL 659
L F +G G +G VYKG+ +P+G V A+K +E S + KE L E +
Sbjct: 16 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 75
Query: 660 SRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRG 719
+ + + ++ L+G C Q L+ + M G L D + + K+ +G L+ + ++G
Sbjct: 76 ASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVR-EHKDNIGSQYLLNWCVQIAKG 133
Query: 720 ILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE-----GIVPAHVS 774
+ YL D + HRD+ A N+L+ K+ DFG ++L + E G VP
Sbjct: 134 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK-- 188
Query: 775 TVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQS 833
++ E L T +SDV+S GV EL+T G +P +
Sbjct: 189 --------WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-----------GIPA 229
Query: 834 SMMFSVID-GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883
S + S+++ G P C + +KC + D+RP E++ E +
Sbjct: 230 SEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 280
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 128/291 (43%), Gaps = 39/291 (13%)
Query: 606 LATNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRA-----QEGSLQGEKEFLTEIQFL 659
L F +G G +G VYKG+ +P+G V + A + S + KE L E +
Sbjct: 46 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVM 105
Query: 660 SRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRG 719
+ + + ++ L+G C Q L+ + M G L D + + K+ +G L+ + ++G
Sbjct: 106 ASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVR-EHKDNIGSQYLLNWCVQIAKG 163
Query: 720 ILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE-----GIVPAHVS 774
+ YL D + HRD+ A N+L+ K+ DFGL++L + E G VP
Sbjct: 164 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK-- 218
Query: 775 TVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQS 833
++ E L T +SDV+S GV EL+T G +P +
Sbjct: 219 --------WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-----------GIPA 259
Query: 834 SMMFSVID-GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883
S + S+++ G P C + +KC + D+RP E++ E +
Sbjct: 260 SEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 310
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 117/286 (40%), Gaps = 40/286 (13%)
Query: 607 ATNNFNSSTQIGQGGYGKVYKGILPDGT-VVAVK---RAQEGSLQGEKEFLTEIQFLSRL 662
A +F +G+G +G VY ++A+K +AQ E + E++ S L
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 663 HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSK----EPLGFAMRLSIALGSSR 718
H N++ L GY + L+ E+ GT+ +L SK + L+ AL
Sbjct: 83 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS--- 139
Query: 719 GILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVK 778
Y H++ V HRDIK N+LL K+ADFG S A P+ T +
Sbjct: 140 ---YCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHA---------PSSRRTTLC 184
Query: 779 GTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFS 838
GT YL PE +K D++SLGV+ E L G P E N ++ S
Sbjct: 185 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--------EANTYQETYKRIS 236
Query: 839 VIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIW 884
++ + +E I LK RP + EV LE W
Sbjct: 237 RVEFTFPDFVTEGARDLISRLLK---HNPSQRPMLREV---LEHPW 276
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 128/300 (42%), Gaps = 43/300 (14%)
Query: 617 IGQGGYGKVYK----GILPDGTV--VAVKRAQEGSLQGE-KEFLTEIQFLSRL-HHRNLV 668
+G+G +G+V + GI T VAVK +EG+ E + ++E++ L + HH N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 669 SLVGYCDEEG-EQMLVYEFMSNGTLRDQLSAKS--------------KEPLGFAMRLSIA 713
+L+G C + G M++ EF G L L +K K+ L + +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 714 LGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHV 773
++G+ +L A HRD+ A NILL K K+ DFGL+R DI P +V
Sbjct: 155 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR-----DIYKD-PDYV 205
Query: 774 STVVKGTP-GYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAY 831
P ++ PE T +SDV+S GV+ E+ + G P +
Sbjct: 206 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP---------GVKI 256
Query: 832 QSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESD 891
+ +G P + + L C E RP+ SE++ L ++ + D
Sbjct: 257 DEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQQD 316
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 118/291 (40%), Gaps = 40/291 (13%)
Query: 602 GEMALATNNFNSSTQIGQGGYGKVYKGILPDGT-VVAVK---RAQEGSLQGEKEFLTEIQ 657
G A +F +G+G +G VY ++A+K +AQ E + E++
Sbjct: 1 GPRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 60
Query: 658 FLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSK----EPLGFAMRLSIA 713
S L H N++ L GY + L+ E+ GT+ +L SK + L+ A
Sbjct: 61 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 120
Query: 714 LGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHV 773
L Y H++ V HRDIK N+LL K+ADFG S A P+
Sbjct: 121 LS------YCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHA---------PSSR 162
Query: 774 STVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQS 833
T + GT YL PE +K D++SLGV+ E L G P E N ++
Sbjct: 163 RTELCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--------EANTYQET 214
Query: 834 SMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIW 884
S ++ + +E I LK RP + EV LE W
Sbjct: 215 YKRISRVEFTFPDFVTEGARDLISRLLK---HNPSQRPMLREV---LEHPW 259
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 79.7 bits (195), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 117/286 (40%), Gaps = 40/286 (13%)
Query: 607 ATNNFNSSTQIGQGGYGKVYKGILPDGT-VVAVK---RAQEGSLQGEKEFLTEIQFLSRL 662
A +F +G+G +G VY ++A+K +AQ E + E++ S L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 663 HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSK----EPLGFAMRLSIALGSSR 718
H N++ L GY + L+ E+ GT+ +L SK + L+ AL
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS--- 127
Query: 719 GILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVK 778
Y H++ V HRDIK N+LL K+ADFG S A P+ T +
Sbjct: 128 ---YCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHA---------PSSRRTTLC 172
Query: 779 GTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFS 838
GT YL PE +K D++SLGV+ E L G P E N ++ S
Sbjct: 173 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--------EANTYQETYKRIS 224
Query: 839 VIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIW 884
++ + +E I LK RP + EV LE W
Sbjct: 225 RVEFTFPDFVTEGARDLISRLLK---HNPSQRPMLREV---LEHPW 264
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 79.7 bits (195), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 129/304 (42%), Gaps = 51/304 (16%)
Query: 617 IGQGGYGKVYK----GILPDGTV--VAVKRAQEGSLQGE-KEFLTEIQFLSRL-HHRNLV 668
+G+G +G+V + GI T VAVK +EG+ E + ++E++ L + HH N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 669 SLVGYCDEEG-EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMR--------------LSIA 713
+L+G C + G M++ EF G L L +K E + + + + +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 714 LGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSR-LAPVPDIEGIVPAH 772
++G+ +L A HRD+ A NILL K K+ DFGL+R + PD
Sbjct: 155 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD-------- 203
Query: 773 VSTVVKGTP----GYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREV 827
V KG ++ PE T +SDV+S GV+ E+ + G P
Sbjct: 204 --XVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP--------- 252
Query: 828 NIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMM 887
+ + +G P + + L C E RP+ SE++ L ++
Sbjct: 253 GVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 312
Query: 888 PESD 891
+ D
Sbjct: 313 AQQD 316
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 79.7 bits (195), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 129/300 (43%), Gaps = 43/300 (14%)
Query: 617 IGQGGYGKVYK----GILPDGTV--VAVKRAQEGSLQGE-KEFLTEIQFLSRL-HHRNLV 668
+G+G +G+V + GI T VAVK +EG+ E + ++E++ L + HH N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 669 SLVGYCDEEG-EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMR--------------LSIA 713
+L+G C + G M++ EF G L L +K E + + + + +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 714 LGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHV 773
++G+ +L A HRD+ A NILL K K+ DFGL+R DI P +V
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR-----DIYKD-PDYV 196
Query: 774 STVVKGTP-GYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAY 831
P ++ PE T +SDV+S GV+ E+ + G P +
Sbjct: 197 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP---------GVKI 247
Query: 832 QSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESD 891
+ +G P + + L C E RP+ SE++ L ++ + D
Sbjct: 248 DEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQQD 307
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 103/214 (48%), Gaps = 23/214 (10%)
Query: 611 FNSSTQIGQGGYGKVYKGI-LPDGTVVAVKR-AQEGSLQGEK--EFLTEIQFLSRLHHRN 666
F+ +IG G +G VY + + VVA+K+ + G EK + + E++FL +L H N
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 667 LVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTE 726
+ G E LV E+ G+ D L K+PL ++ G+ +G+ YLH+
Sbjct: 116 TIQYRGCYLREHTAWLVMEY-CLGSASDLLEV-HKKPLQEVEIAAVTHGALQGLAYLHSH 173
Query: 727 ADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDP 786
+ HRD+KA NILL K+ DFG + + + PA+ GTP ++ P
Sbjct: 174 N---MIHRDVKAGNILLSEPGLVKLGDFGSASI--------MAPANXFV---GTPYWMAP 219
Query: 787 EYFLTH---KLTDKSDVYSLGVVFLELLTGMQPI 817
E L + K DV+SLG+ +EL P+
Sbjct: 220 EVILAMDEGQYDGKVDVWSLGITCIELAERKPPL 253
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 117/286 (40%), Gaps = 40/286 (13%)
Query: 607 ATNNFNSSTQIGQGGYGKVYKGILPDGT-VVAVK---RAQEGSLQGEKEFLTEIQFLSRL 662
A +F +G+G +G VY ++A+K +AQ E + E++ S L
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 663 HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSK----EPLGFAMRLSIALGSSR 718
H N++ L GY + L+ E+ GT+ +L SK + L+ AL
Sbjct: 65 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS--- 121
Query: 719 GILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVK 778
Y H++ V HRDIK N+LL K+ADFG S A P+ T +
Sbjct: 122 ---YCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHA---------PSSRRTTLC 166
Query: 779 GTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFS 838
GT YL PE +K D++SLGV+ E L G P E N ++ S
Sbjct: 167 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--------EANTYQETYKRIS 218
Query: 839 VIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIW 884
++ + +E I LK RP + EV LE W
Sbjct: 219 RVEFTFPDFVTEGARDLISRLLK---HNPSQRPMLREV---LEHPW 258
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 103/214 (48%), Gaps = 23/214 (10%)
Query: 611 FNSSTQIGQGGYGKVYKGI-LPDGTVVAVKR-AQEGSLQGEK--EFLTEIQFLSRLHHRN 666
F+ +IG G +G VY + + VVA+K+ + G EK + + E++FL +L H N
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 667 LVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTE 726
+ G E LV E+ G+ D L K+PL ++ G+ +G+ YLH+
Sbjct: 77 TIQYRGCYLREHTAWLVMEYCL-GSASDLLEV-HKKPLQEVEIAAVTHGALQGLAYLHSH 134
Query: 727 ADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDP 786
+ HRD+KA NILL K+ DFG + + + PA+ GTP ++ P
Sbjct: 135 N---MIHRDVKAGNILLSEPGLVKLGDFGSASI--------MAPANXFV---GTPYWMAP 180
Query: 787 EYFLTH---KLTDKSDVYSLGVVFLELLTGMQPI 817
E L + K DV+SLG+ +EL P+
Sbjct: 181 EVILAMDEGQYDGKVDVWSLGITCIELAERKPPL 214
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 79.3 bits (194), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 128/300 (42%), Gaps = 43/300 (14%)
Query: 617 IGQGGYGKVYK----GILPDGTV--VAVKRAQEGSLQGE-KEFLTEIQFLSRL-HHRNLV 668
+G+G +G+V + GI T VAVK +EG+ E + ++E++ L + HH N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 669 SLVGYCDEEG-EQMLVYEFMSNGTLRDQLSAKS--------------KEPLGFAMRLSIA 713
+L+G C + G M++ EF G L L +K K+ L + +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 714 LGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHV 773
++G+ +L A HRD+ A NILL K K+ DFGL+R DI P +V
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR-----DIYKD-PDYV 196
Query: 774 STVVKGTP-GYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAY 831
P ++ PE T +SDV+S GV+ E+ + G P +
Sbjct: 197 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP---------GVKI 247
Query: 832 QSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESD 891
+ +G P + + L C E RP+ SE++ L ++ + D
Sbjct: 248 DEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQQD 307
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 79.3 bits (194), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 129/291 (44%), Gaps = 39/291 (13%)
Query: 606 LATNNFNSSTQIGQGGYGKVYKGI-LPDGTVV----AVKRAQEG-SLQGEKEFLTEIQFL 659
L F +G G +G VYKG+ +P+G V A+K +E S + KE L E +
Sbjct: 14 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 73
Query: 660 SRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRG 719
+ + + ++ L+G C Q L+ + M G L D + + K+ +G L+ + ++G
Sbjct: 74 ASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVR-EHKDNIGSQYLLNWCVQIAKG 131
Query: 720 ILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE-----GIVPAHVS 774
+ YL D + HRD+ A N+L+ K+ DFG ++L + E G VP
Sbjct: 132 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK-- 186
Query: 775 TVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQS 833
++ E L T +SDV+S GV EL+T G +P +
Sbjct: 187 --------WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-----------GIPA 227
Query: 834 SMMFSVID-GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883
S + S+++ G P C + +KC + D+RP E++ E +
Sbjct: 228 SEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 278
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 79.3 bits (194), Expect = 9e-15, Method: Composition-based stats.
Identities = 80/286 (27%), Positives = 117/286 (40%), Gaps = 40/286 (13%)
Query: 607 ATNNFNSSTQIGQGGYGKVYKGILPDGT-VVAVK---RAQEGSLQGEKEFLTEIQFLSRL 662
A +F +G+G +G VY ++A+K +AQ E + E++ S L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 663 HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSK----EPLGFAMRLSIALGSSR 718
H N++ L GY + L+ E+ GT+ +L SK + L+ AL
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS--- 127
Query: 719 GILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVK 778
Y H++ V HRDIK N+LL K+ADFG S A P+ T +
Sbjct: 128 ---YCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHA---------PSSRRTTLC 172
Query: 779 GTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFS 838
GT YL PE +K D++SLGV+ E L G P E N ++ S
Sbjct: 173 GTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPF--------EANTYQETYKRIS 224
Query: 839 VIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIW 884
++ + +E I LK RP + EV LE W
Sbjct: 225 RVEFTFPDFVTEGARDLISRLLK---HNPSQRPXLREV---LEHPW 264
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 79.3 bits (194), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 102/211 (48%), Gaps = 21/211 (9%)
Query: 609 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKE-----FLTEIQFLSRL 662
NF +IG+G YG VYK G VVA+ + + L E E + EI L L
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIR---LDTETEGVPSTAIREISLLKEL 59
Query: 663 HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILY 722
+H N+V L+ E + LV+EF+ L+ + A + + + S +G+ +
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 723 LHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPG 782
H+ V HRD+K N+L++ + K+ADFGL+R VP V + VV T
Sbjct: 119 CHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-----VRTYTHEVV--TLW 168
Query: 783 YLDPEYFLTHKLTDKS-DVYSLGVVFLELLT 812
Y PE L K + D++SLG +F E++T
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 79.3 bits (194), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 102/211 (48%), Gaps = 21/211 (9%)
Query: 609 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKE-----FLTEIQFLSRL 662
NF +IG+G YG VYK G VVA+ + + L E E + EI L L
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIR---LDTETEGVPSTAIREISLLKEL 58
Query: 663 HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILY 722
+H N+V L+ E + LV+EF+ L+ + A + + + S +G+ +
Sbjct: 59 NHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYLFQLLQGLAF 117
Query: 723 LHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPG 782
H+ V HRD+K N+L++ + K+ADFGL+R VP V + VV T
Sbjct: 118 CHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-----VRTYTHEVV--TLW 167
Query: 783 YLDPEYFLTHKLTDKS-DVYSLGVVFLELLT 812
Y PE L K + D++SLG +F E++T
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 79.3 bits (194), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 128/300 (42%), Gaps = 43/300 (14%)
Query: 617 IGQGGYGKVYK----GILPDGTV--VAVKRAQEGSLQGE-KEFLTEIQFLSRL-HHRNLV 668
+G+G +G+V + GI T VAVK +EG+ E + ++E++ L + HH N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 669 SLVGYCDEEG-EQMLVYEFMSNGTLRDQLSAKS--------------KEPLGFAMRLSIA 713
+L+G C + G M++ EF G L L +K K+ L + +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYS 156
Query: 714 LGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHV 773
++G+ +L A HRD+ A NILL K K+ DFGL+R DI P +V
Sbjct: 157 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR-----DIYKD-PDYV 207
Query: 774 STVVKGTP-GYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAY 831
P ++ PE T +SDV+S GV+ E+ + G P +
Sbjct: 208 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP---------GVKI 258
Query: 832 QSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESD 891
+ +G P + + L C E RP+ SE++ L ++ + D
Sbjct: 259 DEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQQD 318
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 79.3 bits (194), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 129/291 (44%), Gaps = 39/291 (13%)
Query: 606 LATNNFNSSTQIGQGGYGKVYKGI-LPDGTVV----AVKRAQEG-SLQGEKEFLTEIQFL 659
L F + G +G VYKG+ +P+G V A+K +E S + KE L E +
Sbjct: 19 LKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 78
Query: 660 SRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRG 719
+ + + ++ L+G C Q L+ + M G L D + + K+ +G L+ + ++G
Sbjct: 79 ASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVR-EHKDNIGSQYLLNWCVQIAKG 136
Query: 720 ILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE-----GIVPAHVS 774
+ YL D + HRD+ A N+L+ K+ DFGL++L + E G VP
Sbjct: 137 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK-- 191
Query: 775 TVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQS 833
++ E L T +SDV+S GV EL+T G +P +
Sbjct: 192 --------WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-----------GIPA 232
Query: 834 SMMFSVID-GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883
S + S+++ G P C + +KC + D+RP E++ E +
Sbjct: 233 SEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 283
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 79.3 bits (194), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 129/291 (44%), Gaps = 39/291 (13%)
Query: 606 LATNNFNSSTQIGQGGYGKVYKGI-LPDGTVV----AVKRAQEG-SLQGEKEFLTEIQFL 659
L F +G G +G VYKG+ +P+G V A+K +E S + KE L E +
Sbjct: 19 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 78
Query: 660 SRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRG 719
+ + + ++ L+G C Q L+ + M G L D + + K+ +G L+ + ++G
Sbjct: 79 ASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVR-EHKDNIGSQYLLNWCVQIAKG 136
Query: 720 ILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE-----GIVPAHVS 774
+ YL D + HRD+ A N+L+ K+ DFG ++L + E G VP
Sbjct: 137 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK-- 191
Query: 775 TVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQS 833
++ E L T +SDV+S GV EL+T G +P +
Sbjct: 192 --------WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-----------GIPA 232
Query: 834 SMMFSVID-GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883
S + S+++ G P C + +KC + D+RP E++ E +
Sbjct: 233 SEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 283
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 131/304 (43%), Gaps = 47/304 (15%)
Query: 609 NNFNSSTQIGQGGYGKVYK----GILPDGTV--VAVKRAQEGSLQGEKE-FLTEIQFLSR 661
NN +G G +GKV + G+ + V VAVK + + EKE ++E++ +S
Sbjct: 31 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 90
Query: 662 L-HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMR----------- 709
L H N+V+L+G C G +++ E+ G L + L K++ LG ++
Sbjct: 91 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKE 150
Query: 710 ----------LSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRL 759
L + ++G+ +L A HRD+ A N+LL + AK+ DFGL+R
Sbjct: 151 DGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR- 206
Query: 760 APVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPIS 818
+ D IV + VK ++ PE T +SDV+S G++ E+ + G+ P
Sbjct: 207 DIMNDSNYIVKGNARLPVK----WMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYP 262
Query: 819 HGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMR 878
I S V DG + P+ + + C E RP+ ++
Sbjct: 263 ---------GILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICS 313
Query: 879 ELES 882
L+
Sbjct: 314 FLQE 317
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 129/291 (44%), Gaps = 39/291 (13%)
Query: 606 LATNNFNSSTQIGQGGYGKVYKGI-LPDGTVV----AVKRAQEG-SLQGEKEFLTEIQFL 659
L F + G +G VYKG+ +P+G V A+K +E S + KE L E +
Sbjct: 12 LKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 71
Query: 660 SRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRG 719
+ + + ++ L+G C Q L+ + M G L D + + K+ +G L+ + ++G
Sbjct: 72 ASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVR-EHKDNIGSQYLLNWCVQIAKG 129
Query: 720 ILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE-----GIVPAHVS 774
+ YL D + HRD+ A N+L+ K+ DFGL++L + E G VP
Sbjct: 130 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK-- 184
Query: 775 TVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQS 833
++ E L T +SDV+S GV EL+T G +P +
Sbjct: 185 --------WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-----------GIPA 225
Query: 834 SMMFSVID-GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883
S + S+++ G P C + +KC + D+RP E++ E +
Sbjct: 226 SEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 276
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 129/291 (44%), Gaps = 39/291 (13%)
Query: 606 LATNNFNSSTQIGQGGYGKVYKGI-LPDGTVV----AVKRAQEG-SLQGEKEFLTEIQFL 659
L F +G G +G VYKG+ +P+G V A+K +E S + KE L E +
Sbjct: 12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 71
Query: 660 SRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRG 719
+ + + ++ L+G C Q L+ + M G L D + + K+ +G L+ + ++G
Sbjct: 72 ASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVR-EHKDNIGSQYLLNWCVQIAKG 129
Query: 720 ILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE-----GIVPAHVS 774
+ YL D + HRD+ A N+L+ K+ DFG ++L + E G VP
Sbjct: 130 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK-- 184
Query: 775 TVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQS 833
++ E L T +SDV+S GV EL+T G +P +
Sbjct: 185 --------WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-----------GIPA 225
Query: 834 SMMFSVID-GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883
S + S+++ G P C + +KC + D+RP E++ E +
Sbjct: 226 SEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 276
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 129/300 (43%), Gaps = 43/300 (14%)
Query: 617 IGQGGYGKVYK----GILPDGTV--VAVKRAQEGSLQGE-KEFLTEIQFLSRL-HHRNLV 668
+G+G +G+V + GI T VAVK +EG+ E + ++E++ L + HH N+V
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 669 SLVGYCDEEG-EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMR--------------LSIA 713
+L+G C + G M++ EF G L L +K E + + + + +
Sbjct: 132 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 191
Query: 714 LGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHV 773
++G+ +L A HRD+ A NILL K K+ DFGL+R DI P +V
Sbjct: 192 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR-----DIYKD-PDYV 242
Query: 774 STVVKGTP-GYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAY 831
P ++ PE T +SDV+S GV+ E+ + G P +
Sbjct: 243 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP---------GVKI 293
Query: 832 QSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESD 891
+ +G P + + L C E RP+ SE++ L ++ + D
Sbjct: 294 DEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQQD 353
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 117/286 (40%), Gaps = 40/286 (13%)
Query: 607 ATNNFNSSTQIGQGGYGKVYKGILPDGT-VVAVK---RAQEGSLQGEKEFLTEIQFLSRL 662
A +F +G+G +G VY ++A+K +AQ E + E++ S L
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 663 HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSK----EPLGFAMRLSIALGSSR 718
H N++ L GY + L+ E+ GT+ +L SK + L+ AL
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS--- 126
Query: 719 GILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVK 778
Y H++ V HRDIK N+LL K+ADFG S A P+ T +
Sbjct: 127 ---YCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHA---------PSSRRTTLC 171
Query: 779 GTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFS 838
GT YL PE +K D++SLGV+ E L G P E N ++ S
Sbjct: 172 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--------EANTYQETYKRIS 223
Query: 839 VIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIW 884
++ + +E I LK RP + EV LE W
Sbjct: 224 RVEFTFPDFVTEGARDLISRLLK---HNPSQRPMLREV---LEHPW 263
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 116/286 (40%), Gaps = 40/286 (13%)
Query: 607 ATNNFNSSTQIGQGGYGKVYKGILPDGT-VVAVK---RAQEGSLQGEKEFLTEIQFLSRL 662
A +F +G+G +G VY ++A+K +AQ E + E++ S L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 663 HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSK----EPLGFAMRLSIALGSSR 718
H N++ L GY + L+ E+ G + +L SK + L+ AL
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALS--- 127
Query: 719 GILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVK 778
Y H++ V HRDIK N+LL K+ADFG S A P+ T +
Sbjct: 128 ---YCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHA---------PSSRRTTLC 172
Query: 779 GTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFS 838
GT YL PE +K D++SLGV+ E L G P E N ++ S
Sbjct: 173 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--------EANTYQETYKRIS 224
Query: 839 VIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIW 884
++ + +E I LK RP + EV LE W
Sbjct: 225 RVEFTFPDFVTEGARDLISRLLK---HNPSQRPMLREV---LEHPW 264
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 117/286 (40%), Gaps = 40/286 (13%)
Query: 607 ATNNFNSSTQIGQGGYGKVYKGILPDGT-VVAVK---RAQEGSLQGEKEFLTEIQFLSRL 662
A +F +G+G +G VY ++A+K +AQ E + E++ S L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 663 HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSK----EPLGFAMRLSIALGSSR 718
H N++ L GY + L+ E+ GT+ +L SK + L+ AL
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS--- 125
Query: 719 GILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVK 778
Y H++ V HRDIK N+LL K+ADFG S A P+ T +
Sbjct: 126 ---YCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHA---------PSSRRTTLC 170
Query: 779 GTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFS 838
GT YL PE +K D++SLGV+ E L G P E N ++ S
Sbjct: 171 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--------EANTYQETYKRIS 222
Query: 839 VIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIW 884
++ + +E I LK RP + EV LE W
Sbjct: 223 RVEFTFPDFVTEGARDLISRLLK---HNPSQRPMLREV---LEHPW 262
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 129/291 (44%), Gaps = 38/291 (13%)
Query: 617 IGQGGYGKVYKGILP--DGTV--VAVKRAQ-EGSLQGE-KEFLTEIQFLSRLHHRNLVSL 670
+G+G +G V +G L DGT VAVK + + S Q E +EFL+E + H N++ L
Sbjct: 42 LGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRL 101
Query: 671 VGYCDEEGEQ-----MLVYEFMSNGTLRDQLSAKSKE------PLGFAMRLSIALGSSRG 719
+G C E Q M++ FM G L L E PL ++ + + + G
Sbjct: 102 LGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDI--ALG 159
Query: 720 ILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKG 779
+ YL ++ HRD+ A N +L T VADFGLS+ D + K
Sbjct: 160 MEYL---SNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDY-----YRQGRIAKM 211
Query: 780 TPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFS 838
++ E T KSDV++ GV E+ T GM P +N M
Sbjct: 212 PVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQN----------HEMYDY 261
Query: 839 VIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPE 889
++ G+ P +C+++ ++ C + + RP+ S + +LE + +P+
Sbjct: 262 LLHGHRLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESLPD 312
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 129/291 (44%), Gaps = 39/291 (13%)
Query: 606 LATNNFNSSTQIGQGGYGKVYKGI-LPDGTVV----AVKRAQEG-SLQGEKEFLTEIQFL 659
L F + G +G VYKG+ +P+G V A+K +E S + KE L E +
Sbjct: 19 LKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 78
Query: 660 SRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRG 719
+ + + ++ L+G C Q L+ + M G L D + + K+ +G L+ + ++G
Sbjct: 79 ASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVR-EHKDNIGSQYLLNWCVQIAKG 136
Query: 720 ILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE-----GIVPAHVS 774
+ YL D + HRD+ A N+L+ K+ DFGL++L + E G VP
Sbjct: 137 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK-- 191
Query: 775 TVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQS 833
++ E L T +SDV+S GV EL+T G +P +
Sbjct: 192 --------WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-----------GIPA 232
Query: 834 SMMFSVID-GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883
S + S+++ G P C + +KC + D+RP E++ E +
Sbjct: 233 SEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 283
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 96/341 (28%), Positives = 155/341 (45%), Gaps = 57/341 (16%)
Query: 616 QIGQGGYGKVYKGI-LPDGTVVAVKR---AQEGSLQGEKEFLTEIQFLSRLH-HRNLVSL 670
++G+G YG V+K I G VVAVK+ A + S ++ F EI L+ L H N+V+L
Sbjct: 16 KLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTF-REIMILTELSGHENIVNL 74
Query: 671 VGY--CDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEAD 728
+ D + + LV+++M L + A EP+ + + + I YLH+
Sbjct: 75 LNVLRADNDRDVYLVFDYMETD-LHAVIRANILEPVH---KQYVVYQLIKVIKYLHSGG- 129
Query: 729 PPVFHRDIKASNILLDHKFTAKVADFGLSR-LAPVPDIEGIVPAHVS------------- 774
+ HRD+K SNILL+ + KVADFGLSR + + +P ++
Sbjct: 130 --LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPIL 187
Query: 775 TVVKGTPGYLDPEYFL-THKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQS 833
T T Y PE L + K T D++SLG + E+L G +PI G + + Q
Sbjct: 188 TDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCG-KPIFPGSSTMN------QL 240
Query: 834 SMMFSVIDGNMGSYPS-ECVEK----FIKLALKCCQDETDARPSMSEVMRELESIWNMM- 887
+ VID +PS E VE F K ++ +++ + R S R++ + W +
Sbjct: 241 ERIIGVID-----FPSNEDVESIQSPFAKTMIESLKEKVEIRQSNK---RDIFTKWKNLL 292
Query: 888 ----PESDT--KTPEFINXXXXXXXXXXXXXXXMLKHPYVS 922
P++D + + ++ LKHP+VS
Sbjct: 293 LKINPKADCNEEALDLLDKLLQFNPNKRISANDALKHPFVS 333
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 117/286 (40%), Gaps = 40/286 (13%)
Query: 607 ATNNFNSSTQIGQGGYGKVYKGILPDGT-VVAVK---RAQEGSLQGEKEFLTEIQFLSRL 662
A +F +G+G +G VY ++A+K +AQ E + E++ S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 663 HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSK----EPLGFAMRLSIALGSSR 718
H N++ L GY + L+ E+ GT+ +L SK + L+ AL
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS--- 122
Query: 719 GILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVK 778
Y H++ V HRDIK N+LL K+ADFG S A P+ T +
Sbjct: 123 ---YCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHA---------PSSRRTDLC 167
Query: 779 GTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFS 838
GT YL PE +K D++SLGV+ E L G P E N ++ S
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--------EANTYQETYKRIS 219
Query: 839 VIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIW 884
++ + +E I LK RP + EV LE W
Sbjct: 220 RVEFTFPDFVTEGARDLISRLLK---HNPSQRPMLREV---LEHPW 259
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 118/278 (42%), Gaps = 37/278 (13%)
Query: 617 IGQGGYGKVYKGIL--PD--GTVVAVKRAQEGSLQGEKE-FLTEIQFLSRLHHRNLVSLV 671
IG+G +G V++GI P+ VA+K + + +E FL E + + H ++V L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 672 GYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPV 731
G E ++ E + G LR L + K L A + A S + YL ++
Sbjct: 78 GVITE-NPVWIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLESKR---F 132
Query: 732 FHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPG-----YLDP 786
HRDI A N+L+ K+ DFGLSR ST K + G ++ P
Sbjct: 133 VHRDIAARNVLVSSNDCVKLGDFGLSRY-----------MEDSTYYKASKGKLPIKWMAP 181
Query: 787 EYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 845
E + T SDV+ GV E+L G++P KN + ++ + +G
Sbjct: 182 ESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN----------NDVIGRIENGERL 231
Query: 846 SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883
P C L KC + RP +E+ +L +I
Sbjct: 232 PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 269
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 117/291 (40%), Gaps = 40/291 (13%)
Query: 602 GEMALATNNFNSSTQIGQGGYGKVYKGILPDGT-VVAVK---RAQEGSLQGEKEFLTEIQ 657
G A +F +G+G +G VY ++A+K +AQ E + E++
Sbjct: 4 GSRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 63
Query: 658 FLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSK----EPLGFAMRLSIA 713
S L H N++ L GY + L+ E+ GT+ +L SK + L+ A
Sbjct: 64 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 123
Query: 714 LGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHV 773
L Y H++ V HRDIK N+LL K+ADFG S A P+
Sbjct: 124 LS------YCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHA---------PSSR 165
Query: 774 STVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQS 833
+ GT YL PE +K D++SLGV+ E L G P E N ++
Sbjct: 166 RAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--------EANTYQET 217
Query: 834 SMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIW 884
S ++ + +E I LK RP + EV LE W
Sbjct: 218 YKRISRVEFTFPDFVTEGARDLISRLLK---HNPSQRPMLREV---LEHPW 262
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 100/211 (47%), Gaps = 27/211 (12%)
Query: 616 QIGQGGYGKVYKGILPDGTVVAVK----------RAQEGSLQGEKEFLTEIQFLSRLHHR 665
++G GG VY L + T++ +K R +E +L K F E+ S+L H+
Sbjct: 18 KLGGGGMSTVY---LAEDTILNIKVAIKAIFIPPREKEETL---KRFEREVHNSSQLSHQ 71
Query: 666 NLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHT 725
N+VS++ +E+ LV E++ TL + + +S PL ++ GI + H
Sbjct: 72 NIVSMIDVDEEDDCYYLVMEYIEGPTLSEYI--ESHGPLSVDTAINFTNQILDGIKHAH- 128
Query: 726 EADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLD 785
D + HRDIK NIL+D T K+ DFG+++ + + V GT Y
Sbjct: 129 --DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQ------TNHVLGTVQYFS 180
Query: 786 PEYFLTHKLTDKSDVYSLGVVFLELLTGMQP 816
PE + +D+YS+G+V E+L G P
Sbjct: 181 PEQAKGEATDECTDIYSIGIVLYEMLVGEPP 211
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 118/278 (42%), Gaps = 37/278 (13%)
Query: 617 IGQGGYGKVYKGIL--PD--GTVVAVKRAQEGSLQGEKE-FLTEIQFLSRLHHRNLVSLV 671
IG+G +G V++GI P+ VA+K + + +E FL E + + H ++V L+
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 672 GYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPV 731
G E ++ E + G LR L + K L A + A S + YL ++
Sbjct: 106 GVITE-NPVWIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLESKR---F 160
Query: 732 FHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPG-----YLDP 786
HRDI A N+L+ K+ DFGLSR ST K + G ++ P
Sbjct: 161 VHRDIAARNVLVSSNDCVKLGDFGLSRY-----------MEDSTYYKASKGKLPIKWMAP 209
Query: 787 EYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 845
E + T SDV+ GV E+L G++P KN + ++ + +G
Sbjct: 210 ESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN----------NDVIGRIENGERL 259
Query: 846 SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883
P C L KC + RP +E+ +L +I
Sbjct: 260 PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 297
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 116/286 (40%), Gaps = 40/286 (13%)
Query: 607 ATNNFNSSTQIGQGGYGKVYKGILPDGT-VVAVK---RAQEGSLQGEKEFLTEIQFLSRL 662
A +F +G+G +G VY ++A+K +AQ E + E++ S L
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 663 HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSK----EPLGFAMRLSIALGSSR 718
H N++ L GY + L+ E+ GT+ +L SK + L+ AL
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS--- 148
Query: 719 GILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVK 778
Y H++ V HRDIK N+LL K+ADFG S AP + +
Sbjct: 149 ---YCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLC--------- 193
Query: 779 GTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFS 838
GT YL PE +K D++SLGV+ E L G P E N ++ S
Sbjct: 194 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--------EANTYQETYKRIS 245
Query: 839 VIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIW 884
++ + +E I LK RP + EV LE W
Sbjct: 246 RVEFTFPDFVTEGARDLISRLLK---HNPSQRPMLREV---LEHPW 285
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 117/291 (40%), Gaps = 40/291 (13%)
Query: 602 GEMALATNNFNSSTQIGQGGYGKVYKGILPDGT-VVAVK---RAQEGSLQGEKEFLTEIQ 657
G A +F +G+G +G VY ++A+K +AQ E + E++
Sbjct: 4 GSRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 63
Query: 658 FLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSK----EPLGFAMRLSIA 713
S L H N++ L GY + L+ E+ GT+ +L SK + L+ A
Sbjct: 64 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 123
Query: 714 LGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHV 773
L Y H++ V HRDIK N+LL K+ADFG S AP + +
Sbjct: 124 LS------YCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLC---- 170
Query: 774 STVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQS 833
GT YL PE +K D++SLGV+ E L G P E N ++
Sbjct: 171 -----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--------EANTYQET 217
Query: 834 SMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIW 884
S ++ + +E I LK RP + EV LE W
Sbjct: 218 YKRISRVEFTFPDFVTEGARDLISRLLK---HNPSQRPMLREV---LEHPW 262
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 117/286 (40%), Gaps = 40/286 (13%)
Query: 607 ATNNFNSSTQIGQGGYGKVYKGILPDGT-VVAVK---RAQEGSLQGEKEFLTEIQFLSRL 662
A +F +G+G +G VY ++A+K +AQ E + E++ S L
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 663 HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSK----EPLGFAMRLSIALGSSR 718
H N++ L GY + L+ E+ GT+ +L SK + L+ AL
Sbjct: 63 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS--- 119
Query: 719 GILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVK 778
Y H++ V HRDIK N+LL K+ADFG S A P+ T +
Sbjct: 120 ---YCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHA---------PSSRRTTLC 164
Query: 779 GTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFS 838
GT YL PE +K D++SLGV+ E L G P E N ++ S
Sbjct: 165 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--------EANTYQETYKRIS 216
Query: 839 VIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIW 884
++ + +E I LK RP + EV LE W
Sbjct: 217 RVEFTFPDFVTEGARDLISRLLK---HNPSQRPMLREV---LEHPW 256
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 117/286 (40%), Gaps = 40/286 (13%)
Query: 607 ATNNFNSSTQIGQGGYGKVYKGILPDGT-VVAVK---RAQEGSLQGEKEFLTEIQFLSRL 662
A +F +G+G +G VY ++A+K +AQ E + E++ S L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 663 HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSK----EPLGFAMRLSIALGSSR 718
H N++ L GY + L+ E+ GT+ +L SK + L+ AL
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS--- 127
Query: 719 GILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVK 778
Y H++ V HRDIK N+LL K+ADFG S A P+ T +
Sbjct: 128 ---YCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHA---------PSSRRTDLC 172
Query: 779 GTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFS 838
GT YL PE +K D++SLGV+ E L G P E N ++ S
Sbjct: 173 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--------EANTYQETYKRIS 224
Query: 839 VIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIW 884
++ + +E I LK RP + EV LE W
Sbjct: 225 RVEFTFPDFVTEGARDLISRLLK---HNPSQRPMLREV---LEHPW 264
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 117/286 (40%), Gaps = 40/286 (13%)
Query: 607 ATNNFNSSTQIGQGGYGKVYKGILPDGT-VVAVK---RAQEGSLQGEKEFLTEIQFLSRL 662
A +F +G+G +G VY ++A+K +AQ E + E++ S L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 663 HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSK----EPLGFAMRLSIALGSSR 718
H N++ L GY + L+ E+ GT+ +L SK + L+ AL
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS--- 123
Query: 719 GILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVK 778
Y H++ V HRDIK N+LL K+ADFG S A P+ T +
Sbjct: 124 ---YCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHA---------PSSRRTDLC 168
Query: 779 GTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFS 838
GT YL PE +K D++SLGV+ E L G P E N ++ S
Sbjct: 169 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--------EANTYQETYKRIS 220
Query: 839 VIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIW 884
++ + +E I LK RP + EV LE W
Sbjct: 221 RVEFTFPDFVTEGARDLISRLLK---HNPSQRPMLREV---LEHPW 260
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 97/214 (45%), Gaps = 22/214 (10%)
Query: 617 IGQGGYGKVYK-GILPDGTVVAVKRAQEGSL-QGEKEFL-TEIQFLSRLHHRNLVSLVGY 673
IG G YG+ K DG ++ K GS+ + EK+ L +E+ L L H N+V
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 674 CDEEGEQML--VYEFMSNGTLRDQLSAKSKEPL----GFAMRLSIALGSSRGILYLHTEA 727
+ L V E+ G L ++ +KE F +R+ L + + ++
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 728 DPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVK---GTPGYL 784
V HRD+K +N+ LD K K+ DFGL+R + H ++ K GTP Y+
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLAR----------ILNHDTSFAKTFVGTPYYM 183
Query: 785 DPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPIS 818
PE +KSD++SLG + EL M P +
Sbjct: 184 SPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFT 217
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 118/278 (42%), Gaps = 37/278 (13%)
Query: 617 IGQGGYGKVYKGIL--PD--GTVVAVKRAQEGSLQGEKE-FLTEIQFLSRLHHRNLVSLV 671
IG+G +G V++GI P+ VA+K + + +E FL E + + H ++V L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 672 GYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPV 731
G E ++ E + G LR L + K L A + A S + YL ++
Sbjct: 78 GVITE-NPVWIIMELCTLGELRSFLQVR-KFSLDLASLILYAYQLSTALAYLESKR---F 132
Query: 732 FHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPG-----YLDP 786
HRDI A N+L+ K+ DFGLSR ST K + G ++ P
Sbjct: 133 VHRDIAARNVLVSSNDCVKLGDFGLSRY-----------MEDSTXXKASKGKLPIKWMAP 181
Query: 787 EYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 845
E + T SDV+ GV E+L G++P KN + ++ + +G
Sbjct: 182 ESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN----------NDVIGRIENGERL 231
Query: 846 SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883
P C L KC + RP +E+ +L +I
Sbjct: 232 PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 269
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 118/278 (42%), Gaps = 37/278 (13%)
Query: 617 IGQGGYGKVYKGIL--PD--GTVVAVKRAQEGSLQGEKE-FLTEIQFLSRLHHRNLVSLV 671
IG+G +G V++GI P+ VA+K + + +E FL E + + H ++V L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 672 GYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPV 731
G E ++ E + G LR L + K L A + A S + YL ++
Sbjct: 78 GVITE-NPVWIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLESKR---F 132
Query: 732 FHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPG-----YLDP 786
HRDI A N+L+ K+ DFGLSR ST K + G ++ P
Sbjct: 133 VHRDIAARNVLVSSNDCVKLGDFGLSRY-----------MEDSTYYKASKGKLPIKWMAP 181
Query: 787 EYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 845
E + T SDV+ GV E+L G++P KN + ++ + +G
Sbjct: 182 ESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN----------NDVIGRIENGERL 231
Query: 846 SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883
P C L KC + RP +E+ +L +I
Sbjct: 232 PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 269
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 118/291 (40%), Gaps = 40/291 (13%)
Query: 602 GEMALATNNFNSSTQIGQGGYGKVYKGILPDGT-VVAVK---RAQEGSLQGEKEFLTEIQ 657
G+ A +F +G+G +G VY ++A+K +AQ E + E++
Sbjct: 1 GKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 60
Query: 658 FLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSK----EPLGFAMRLSIA 713
S L H N++ L GY + L+ E+ GT+ +L SK + L+ A
Sbjct: 61 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 120
Query: 714 LGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHV 773
L Y H++ V HRDIK N+LL K+ADFG S A P+
Sbjct: 121 LS------YCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHA---------PSSR 162
Query: 774 STVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQS 833
+ GT YL PE +K D++SLGV+ E L G P E N ++
Sbjct: 163 RXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--------EANTYQET 214
Query: 834 SMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIW 884
S ++ + +E I LK RP + EV LE W
Sbjct: 215 YKRISRVEFTFPDFVTEGARDLISRLLK---HNPSQRPMLREV---LEHPW 259
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 97/214 (45%), Gaps = 22/214 (10%)
Query: 617 IGQGGYGKVYK-GILPDGTVVAVKRAQEGSL-QGEKEFL-TEIQFLSRLHHRNLVSLVGY 673
IG G YG+ K DG ++ K GS+ + EK+ L +E+ L L H N+V
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 674 CDEEGEQML--VYEFMSNGTLRDQLSAKSKEPL----GFAMRLSIALGSSRGILYLHTEA 727
+ L V E+ G L ++ +KE F +R+ L + + ++
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 728 DPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVK---GTPGYL 784
V HRD+K +N+ LD K K+ DFGL+R + H ++ K GTP Y+
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLAR----------ILNHDTSFAKAFVGTPYYM 183
Query: 785 DPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPIS 818
PE +KSD++SLG + EL M P +
Sbjct: 184 SPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFT 217
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 117/286 (40%), Gaps = 40/286 (13%)
Query: 607 ATNNFNSSTQIGQGGYGKVYKGILPDGT-VVAVK---RAQEGSLQGEKEFLTEIQFLSRL 662
A +F +G+G +G VY ++A+K +AQ E + E++ S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 663 HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSK----EPLGFAMRLSIALGSSR 718
H N++ L GY + L+ E+ GT+ +L SK + L+ AL
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS--- 122
Query: 719 GILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVK 778
Y H++ V HRDIK N+LL K+ADFG S A P+ T +
Sbjct: 123 ---YCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHA---------PSSRRTDLC 167
Query: 779 GTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFS 838
GT YL PE +K D++SLGV+ E L G P E N ++ S
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--------EANTYQETYKRIS 219
Query: 839 VIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIW 884
++ + +E I LK RP + EV LE W
Sbjct: 220 RVEFTFPDFVTEGARDLISRLLK---HNPSQRPMLREV---LEHPW 259
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 128/291 (43%), Gaps = 39/291 (13%)
Query: 606 LATNNFNSSTQIGQGGYGKVYKGI-LPDGTVV----AVKRAQEG-SLQGEKEFLTEIQFL 659
L F +G G +G VYKG+ +P+G V A+K +E S + KE L E +
Sbjct: 14 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 73
Query: 660 SRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRG 719
+ + + ++ L+G C Q L+ + M G L D + + K+ +G L+ + ++G
Sbjct: 74 ASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVR-EHKDNIGSQYLLNWCVQIAKG 131
Query: 720 ILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE-----GIVPAHVS 774
+ YL D + HRD+ A N+L+ K+ DFG ++L + E G VP
Sbjct: 132 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK-- 186
Query: 775 TVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQS 833
++ E L T +SDV+S GV EL+T G +P +
Sbjct: 187 --------WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-----------GIPA 227
Query: 834 SMMFSVID-GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883
S + S+++ G P C + KC + D+RP E++ E +
Sbjct: 228 SEISSILEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKM 278
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 118/278 (42%), Gaps = 37/278 (13%)
Query: 617 IGQGGYGKVYKGIL--PD--GTVVAVKRAQEGSLQGEKE-FLTEIQFLSRLHHRNLVSLV 671
IG+G +G V++GI P+ VA+K + + +E FL E + + H ++V L+
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 672 GYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPV 731
G E ++ E + G LR L + K L A + A S + YL ++
Sbjct: 75 GVITE-NPVWIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLESKR---F 129
Query: 732 FHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPG-----YLDP 786
HRDI A N+L+ K+ DFGLSR ST K + G ++ P
Sbjct: 130 VHRDIAARNVLVSSNDCVKLGDFGLSRY-----------MEDSTYYKASKGKLPIKWMAP 178
Query: 787 EYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 845
E + T SDV+ GV E+L G++P KN + ++ + +G
Sbjct: 179 ESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN----------NDVIGRIENGERL 228
Query: 846 SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883
P C L KC + RP +E+ +L +I
Sbjct: 229 PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 266
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 117/286 (40%), Gaps = 40/286 (13%)
Query: 607 ATNNFNSSTQIGQGGYGKVYKGILPDGT-VVAVK---RAQEGSLQGEKEFLTEIQFLSRL 662
A +F +G+G +G VY ++A+K +AQ E + E++ S L
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 663 HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSK----EPLGFAMRLSIALGSSR 718
H N++ L GY + L+ E+ GT+ +L SK + L+ AL
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS--- 124
Query: 719 GILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVK 778
Y H++ V HRDIK N+LL K+A+FG S AP + T +
Sbjct: 125 ---YCHSKR---VIHRDIKPENLLLGSAGELKIANFGWSVHAP---------SSRRTTLC 169
Query: 779 GTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFS 838
GT YL PE +K D++SLGV+ E L G P E N ++ S
Sbjct: 170 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--------EANTYQETYKRIS 221
Query: 839 VIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIW 884
++ + +E I LK RP + EV LE W
Sbjct: 222 RVEFTFPDFVTEGARDLISRLLK---HNPSQRPMLREV---LEHPW 261
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 118/278 (42%), Gaps = 37/278 (13%)
Query: 617 IGQGGYGKVYKGIL--PD--GTVVAVKRAQEGSLQGEKE-FLTEIQFLSRLHHRNLVSLV 671
IG+G +G V++GI P+ VA+K + + +E FL E + + H ++V L+
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 672 GYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPV 731
G E ++ E + G LR L + K L A + A S + YL ++
Sbjct: 83 GVITE-NPVWIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLESKR---F 137
Query: 732 FHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPG-----YLDP 786
HRDI A N+L+ K+ DFGLSR ST K + G ++ P
Sbjct: 138 VHRDIAARNVLVSSNDCVKLGDFGLSRY-----------MEDSTYYKASKGKLPIKWMAP 186
Query: 787 EYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 845
E + T SDV+ GV E+L G++P KN + ++ + +G
Sbjct: 187 ESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN----------NDVIGRIENGERL 236
Query: 846 SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883
P C L KC + RP +E+ +L +I
Sbjct: 237 PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 274
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 116/286 (40%), Gaps = 40/286 (13%)
Query: 607 ATNNFNSSTQIGQGGYGKVYKGILPDGT-VVAVK---RAQEGSLQGEKEFLTEIQFLSRL 662
A +F +G+G +G VY ++A+K +AQ E + E++ S L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 663 HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSK----EPLGFAMRLSIALGSSR 718
H N++ L GY + L+ E+ GT+ +L SK + L+ AL
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS--- 123
Query: 719 GILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVK 778
Y H++ V HRDIK N+LL K+ADFG S AP + +
Sbjct: 124 ---YCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDTLC--------- 168
Query: 779 GTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFS 838
GT YL PE +K D++SLGV+ E L G P E N ++ S
Sbjct: 169 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--------EANTYQETYKRIS 220
Query: 839 VIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIW 884
++ + +E I LK RP + EV LE W
Sbjct: 221 RVEFTFPDFVTEGARDLISRLLK---HNPSQRPMLREV---LEHPW 260
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 118/278 (42%), Gaps = 37/278 (13%)
Query: 617 IGQGGYGKVYKGIL--PD--GTVVAVKRAQEGSLQGEKE-FLTEIQFLSRLHHRNLVSLV 671
IG+G +G V++GI P+ VA+K + + +E FL E + + H ++V L+
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 672 GYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPV 731
G E ++ E + G LR L + K L A + A S + YL ++
Sbjct: 80 GVITE-NPVWIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLESKR---F 134
Query: 732 FHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPG-----YLDP 786
HRDI A N+L+ K+ DFGLSR ST K + G ++ P
Sbjct: 135 VHRDIAARNVLVSSNDCVKLGDFGLSRY-----------MEDSTYYKASKGKLPIKWMAP 183
Query: 787 EYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 845
E + T SDV+ GV E+L G++P KN + ++ + +G
Sbjct: 184 ESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN----------NDVIGRIENGERL 233
Query: 846 SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883
P C L KC + RP +E+ +L +I
Sbjct: 234 PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 271
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 118/278 (42%), Gaps = 37/278 (13%)
Query: 617 IGQGGYGKVYKGIL--PD--GTVVAVKRAQEGSLQGEKE-FLTEIQFLSRLHHRNLVSLV 671
IG+G +G V++GI P+ VA+K + + +E FL E + + H ++V L+
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 672 GYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPV 731
G E ++ E + G LR L + K L A + A S + YL ++
Sbjct: 81 GVITE-NPVWIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLESKR---F 135
Query: 732 FHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPG-----YLDP 786
HRDI A N+L+ K+ DFGLSR ST K + G ++ P
Sbjct: 136 VHRDIAARNVLVSSNDCVKLGDFGLSRY-----------MEDSTYYKASKGKLPIKWMAP 184
Query: 787 EYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 845
E + T SDV+ GV E+L G++P KN + ++ + +G
Sbjct: 185 ESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN----------NDVIGRIENGERL 234
Query: 846 SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883
P C L KC + RP +E+ +L +I
Sbjct: 235 PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 272
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 103/213 (48%), Gaps = 21/213 (9%)
Query: 607 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKE-----FLTEIQFLS 660
+ NF +IG+G YG VYK G VVA+K+ + L E E + EI L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR---LDTETEGVPSTAIREISLLK 60
Query: 661 RLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGI 720
L+H N+V L+ E + LV+E + L+ + A + + + S +G+
Sbjct: 61 ELNHPNIVKLLDVIHTENKLYLVFEHVDQD-LKKFMDASALTGIPLPLIKSYLFQLLQGL 119
Query: 721 LYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGT 780
+ H+ V HRD+K N+L++ + K+ADFGL+R VP V + VV T
Sbjct: 120 AFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-----VRTYXHEVV--T 169
Query: 781 PGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLT 812
Y PE L K + D++SLG +F E++T
Sbjct: 170 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 118/278 (42%), Gaps = 37/278 (13%)
Query: 617 IGQGGYGKVYKGIL--PD--GTVVAVKRAQEGSLQGEKE-FLTEIQFLSRLHHRNLVSLV 671
IG+G +G V++GI P+ VA+K + + +E FL E + + H ++V L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 672 GYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPV 731
G E ++ E + G LR L + K L A + A S + YL ++
Sbjct: 78 GVITE-NPVWIIMELCTLGELRSFLQVR-KFSLDLASLILYAYQLSTALAYLESKR---F 132
Query: 732 FHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPG-----YLDP 786
HRDI A N+L+ K+ DFGLSR ST K + G ++ P
Sbjct: 133 VHRDIAARNVLVSATDCVKLGDFGLSRY-----------MEDSTYYKASKGKLPIKWMAP 181
Query: 787 EYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 845
E + T SDV+ GV E+L G++P KN + ++ + +G
Sbjct: 182 ESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN----------NDVIGRIENGERL 231
Query: 846 SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883
P C L KC + RP +E+ +L +I
Sbjct: 232 PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 269
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 128/291 (43%), Gaps = 39/291 (13%)
Query: 606 LATNNFNSSTQIGQGGYGKVYKGI-LPDGTVV----AVKRAQEG-SLQGEKEFLTEIQFL 659
L F +G G +G VYKG+ +P+G V A+K +E S + KE L E +
Sbjct: 14 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 73
Query: 660 SRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRG 719
+ + + ++ L+G C Q L+ + M G L D + + K+ +G L+ + ++G
Sbjct: 74 ASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVR-EHKDNIGSQYLLNWCVQIAKG 131
Query: 720 ILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE-----GIVPAHVS 774
+ YL D + HRD+ A N+L+ K+ DFG ++L + E G VP
Sbjct: 132 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK-- 186
Query: 775 TVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQS 833
++ E L T +SDV+S GV EL+T G +P +
Sbjct: 187 --------WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-----------GIPA 227
Query: 834 SMMFSVID-GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883
S + S+++ G P C + KC + D+RP E++ E +
Sbjct: 228 SEISSILEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKM 278
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 102/211 (48%), Gaps = 21/211 (9%)
Query: 609 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKE-----FLTEIQFLSRL 662
NF +IG+G YG VYK G VVA+K+ + L E E + EI L L
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR---LDTETEGVPSTAIREISLLKEL 58
Query: 663 HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILY 722
+H N+V L+ E + LV+E + L+ + A + + + S +G+ +
Sbjct: 59 NHPNIVKLLDVIHTENKLYLVFEHVHQD-LKTFMDASALTGIPLPLIKSYLFQLLQGLAF 117
Query: 723 LHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPG 782
H+ V HRD+K N+L++ + K+ADFGL+R VP V + VV T
Sbjct: 118 CHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-----VRTYTHEVV--TLW 167
Query: 783 YLDPEYFLTHKLTDKS-DVYSLGVVFLELLT 812
Y PE L K + D++SLG +F E++T
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 117/286 (40%), Gaps = 40/286 (13%)
Query: 607 ATNNFNSSTQIGQGGYGKVYKGILPDGT-VVAVK---RAQEGSLQGEKEFLTEIQFLSRL 662
A +F +G+G +G VY ++A+K +AQ E + E++ S L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 663 HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSK----EPLGFAMRLSIALGSSR 718
H N++ L GY + L+ E+ GT+ +L SK + L+ AL
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS--- 125
Query: 719 GILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVK 778
Y H++ V HRDIK N+LL K+A+FG S AP + T +
Sbjct: 126 ---YCHSKR---VIHRDIKPENLLLGSAGELKIANFGWSVHAP---------SSRRTTLC 170
Query: 779 GTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFS 838
GT YL PE +K D++SLGV+ E L G P E N ++ S
Sbjct: 171 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--------EANTYQETYKRIS 222
Query: 839 VIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIW 884
++ + +E I LK RP + EV LE W
Sbjct: 223 RVEFTFPDFVTEGARDLISRLLK---HNPSQRPMLREV---LEHPW 262
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 116/286 (40%), Gaps = 40/286 (13%)
Query: 607 ATNNFNSSTQIGQGGYGKVYKGILPDGT-VVAVK---RAQEGSLQGEKEFLTEIQFLSRL 662
A +F +G+G +G VY + ++A+K +AQ E + E++ S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 663 HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSK----EPLGFAMRLSIALGSSR 718
H N++ L GY + L+ E+ GT+ +L SK + L+ AL
Sbjct: 66 RHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS--- 122
Query: 719 GILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVK 778
Y H++ V HRDIK N+LL K+ADFG S A P+ +
Sbjct: 123 ---YCHSKK---VIHRDIKPENLLLGSAGELKIADFGWSVHA---------PSSRRAALC 167
Query: 779 GTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFS 838
GT YL PE +K D++SLGV+ E L G P E N + S
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--------EANTYQDTYKRIS 219
Query: 839 VIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIW 884
++ + +E I LK RP + EV LE W
Sbjct: 220 RVEFTFPDFVTEGARDLISRLLK---HNPSQRPMLREV---LEHPW 259
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 116/286 (40%), Gaps = 40/286 (13%)
Query: 607 ATNNFNSSTQIGQGGYGKVYKGILPDGT-VVAVK---RAQEGSLQGEKEFLTEIQFLSRL 662
A +F +G+G +G VY ++A+K +AQ E + E++ S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 663 HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSK----EPLGFAMRLSIALGSSR 718
H N++ L GY + L+ E+ GT+ +L SK + L+ AL
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS--- 122
Query: 719 GILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVK 778
Y H++ V HRDIK N+LL K+ADFG S A P+ +
Sbjct: 123 ---YCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHA---------PSSRRAALC 167
Query: 779 GTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFS 838
GT YL PE +K D++SLGV+ E L G P E N ++ S
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--------EANTYQETYKRIS 219
Query: 839 VIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIW 884
++ + +E I LK RP + EV LE W
Sbjct: 220 RVEFTFPDFVTEGARDLISRLLK---HNPSQRPMLREV---LEHPW 259
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 129/275 (46%), Gaps = 35/275 (12%)
Query: 617 IGQGGYGKVYKGI-LPDGTV----VAVKRAQEGSLQGEKEFLTEIQF-LSRLHHRNLVSL 670
+G G +G V+KG+ +P+G V +K ++ S + + +T+ + L H ++V L
Sbjct: 39 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 98
Query: 671 VGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPP 730
+G C Q LV +++ G+L D + + + LG + L+ + ++G+ YL
Sbjct: 99 LGLCPGSSLQ-LVTQYLPLGSLLDHVR-QHRGALGPQLLLNWGVQIAKGMYYLEEHG--- 153
Query: 731 VFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFL 790
+ HR++ A N+LL +VADFG++ L P PD + ++ + T +K ++ E
Sbjct: 154 MVHRNLAARNVLLKSPSQVQVADFGVADLLP-PDDKQLLYSEAKTPIK----WMALESIH 208
Query: 791 THKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVID----GNMG 845
K T +SDV+S GV EL+T G +P Y + V D G
Sbjct: 209 FGKYTHQSDVWSYGVTVWELMTFGAEP--------------YAGLRLAEVPDLLEKGERL 254
Query: 846 SYPSECVEKFIKLALKCCQDETDARPSMSEVMREL 880
+ P C + +KC + + RP+ E+ E
Sbjct: 255 AQPQICTIDVYMVMVKCWMIDENIRPTFKELANEF 289
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 96/211 (45%), Gaps = 16/211 (7%)
Query: 617 IGQGGYGKVYK-GILPDGTVVAVKRAQEGSL-QGEKEFL-TEIQFLSRLHHRNLVSLVGY 673
IG G YG+ K DG ++ K GS+ + EK+ L +E+ L L H N+V
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 674 CDEEGEQML--VYEFMSNGTLRDQLSAKSKEPL----GFAMRLSIALGSSRGILYLHTEA 727
+ L V E+ G L ++ +KE F +R+ L + + ++
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 728 DPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPE 787
V HRD+K +N+ LD K K+ DFGL+R+ + E V GTP Y+ PE
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARI--LNHDEDFAKEFV-----GTPYYMSPE 186
Query: 788 YFLTHKLTDKSDVYSLGVVFLELLTGMQPIS 818
+KSD++SLG + EL M P +
Sbjct: 187 QMNRMSYNEKSDIWSLGCLLYELCALMPPFT 217
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 116/286 (40%), Gaps = 40/286 (13%)
Query: 607 ATNNFNSSTQIGQGGYGKVYKGILPDGT-VVAVK---RAQEGSLQGEKEFLTEIQFLSRL 662
A +F +G+G +G VY ++A+K +AQ E + E++ S L
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 663 HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSK----EPLGFAMRLSIALGSSR 718
H N++ L GY + L+ E+ GT+ +L SK + L+ AL
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS--- 124
Query: 719 GILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVK 778
Y H++ V HRDIK N+LL K+ADFG S A P+ +
Sbjct: 125 ---YCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHA---------PSSRRXXLC 169
Query: 779 GTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFS 838
GT YL PE +K D++SLGV+ E L G P E N ++ S
Sbjct: 170 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--------EANTYQETYKRIS 221
Query: 839 VIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIW 884
++ + +E I LK RP + EV LE W
Sbjct: 222 RVEFTFPDFVTEGARDLISRLLK---HNPSQRPMLREV---LEHPW 261
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 115/286 (40%), Gaps = 40/286 (13%)
Query: 607 ATNNFNSSTQIGQGGYGKVYKGILPDGT-VVAVK---RAQEGSLQGEKEFLTEIQFLSRL 662
A +F +G+G +G VY ++A+K +AQ E + E++ S L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 663 HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSK----EPLGFAMRLSIALGSSR 718
H N++ L GY + L+ E+ G + +L SK + L+ AL
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALS--- 127
Query: 719 GILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVK 778
Y H++ V HRDIK N+LL K+ADFG S A P+ +
Sbjct: 128 ---YCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHA---------PSSRRXXLX 172
Query: 779 GTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFS 838
GT YL PE +K D++SLGV+ E L G P E N ++ S
Sbjct: 173 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--------EANTYQETYKRIS 224
Query: 839 VIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIW 884
++ + +E I LK RP + EV LE W
Sbjct: 225 RVEFTFPDFVTEGARDLISRLLK---HNPSQRPMLREV---LEHPW 264
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 129/275 (46%), Gaps = 35/275 (12%)
Query: 617 IGQGGYGKVYKGI-LPDGTV----VAVKRAQEGSLQGEKEFLTEIQF-LSRLHHRNLVSL 670
+G G +G V+KG+ +P+G V +K ++ S + + +T+ + L H ++V L
Sbjct: 21 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 80
Query: 671 VGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPP 730
+G C Q LV +++ G+L D + + + LG + L+ + ++G+ YL
Sbjct: 81 LGLCPGSSLQ-LVTQYLPLGSLLDHVR-QHRGALGPQLLLNWGVQIAKGMYYLEEHG--- 135
Query: 731 VFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFL 790
+ HR++ A N+LL +VADFG++ L P PD + ++ + T +K ++ E
Sbjct: 136 MVHRNLAARNVLLKSPSQVQVADFGVADLLP-PDDKQLLYSEAKTPIK----WMALESIH 190
Query: 791 THKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVID----GNMG 845
K T +SDV+S GV EL+T G +P Y + V D G
Sbjct: 191 FGKYTHQSDVWSYGVTVWELMTFGAEP--------------YAGLRLAEVPDLLEKGERL 236
Query: 846 SYPSECVEKFIKLALKCCQDETDARPSMSEVMREL 880
+ P C + +KC + + RP+ E+ E
Sbjct: 237 AQPQICTIDVYMVMVKCWMIDENIRPTFKELANEF 271
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 118/278 (42%), Gaps = 37/278 (13%)
Query: 617 IGQGGYGKVYKGIL--PD--GTVVAVKRAQEGSLQGEKE-FLTEIQFLSRLHHRNLVSLV 671
IG+G +G V++GI P+ VA+K + + +E FL E + + H ++V L+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 672 GYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPV 731
G E ++ E + G LR L + K L A + A S + YL ++
Sbjct: 458 GVITE-NPVWIIMELCTLGELRSFLQVR-KFSLDLASLILYAYQLSTALAYLESKR---F 512
Query: 732 FHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPG-----YLDP 786
HRDI A N+L+ K+ DFGLSR ST K + G ++ P
Sbjct: 513 VHRDIAARNVLVSSNDCVKLGDFGLSRY-----------MEDSTYYKASKGKLPIKWMAP 561
Query: 787 EYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 845
E + T SDV+ GV E+L G++P KN + ++ + +G
Sbjct: 562 ESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN----------NDVIGRIENGERL 611
Query: 846 SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883
P C L KC + RP +E+ +L +I
Sbjct: 612 PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 649
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 101/216 (46%), Gaps = 15/216 (6%)
Query: 604 MALATNNFNSSTQIGQGGYGKVYK-GILPDGTVVAVKRAQ-EGSLQGEKEFLTEIQFLSR 661
M L ++F +++G G G V+K P G V+A K E + + E+Q L
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 662 LHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGIL 721
+ +V G +GE + E M G+L L + P ++SIA+ +G+
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV--IKGLT 118
Query: 722 YLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTP 781
YL + + HRD+K SNIL++ + K+ DFG+S G + ++ GT
Sbjct: 119 YLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS---------GQLIDSMANSFVGTR 167
Query: 782 GYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPI 817
Y+ PE + +SD++S+G+ +E+ G PI
Sbjct: 168 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 118/278 (42%), Gaps = 37/278 (13%)
Query: 617 IGQGGYGKVYKGIL--PD--GTVVAVKRAQEGSLQGEKE-FLTEIQFLSRLHHRNLVSLV 671
IG+G +G V++GI P+ VA+K + + +E FL E + + H ++V L+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 672 GYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPV 731
G E ++ E + G LR L + K L A + A S + YL ++
Sbjct: 458 GVITE-NPVWIIMELCTLGELRSFLQVR-KFSLDLASLILYAYQLSTALAYLESKR---F 512
Query: 732 FHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPG-----YLDP 786
HRDI A N+L+ K+ DFGLSR ST K + G ++ P
Sbjct: 513 VHRDIAARNVLVSATDCVKLGDFGLSRY-----------MEDSTYYKASKGKLPIKWMAP 561
Query: 787 EYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 845
E + T SDV+ GV E+L G++P KN + ++ + +G
Sbjct: 562 ESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN----------NDVIGRIENGERL 611
Query: 846 SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883
P C L KC + RP +E+ +L +I
Sbjct: 612 PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 649
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 101/216 (46%), Gaps = 15/216 (6%)
Query: 604 MALATNNFNSSTQIGQGGYGKVYK-GILPDGTVVAVKRAQ-EGSLQGEKEFLTEIQFLSR 661
M L ++F +++G G G V+K P G V+A K E + + E+Q L
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 662 LHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGIL 721
+ +V G +GE + E M G+L L + P ++SIA+ +G+
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV--IKGLT 118
Query: 722 YLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTP 781
YL + + HRD+K SNIL++ + K+ DFG+S G + ++ GT
Sbjct: 119 YLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS---------GQLIDSMANSFVGTR 167
Query: 782 GYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPI 817
Y+ PE + +SD++S+G+ +E+ G PI
Sbjct: 168 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 101/216 (46%), Gaps = 15/216 (6%)
Query: 604 MALATNNFNSSTQIGQGGYGKVYK-GILPDGTVVAVKRAQ-EGSLQGEKEFLTEIQFLSR 661
M L ++F +++G G G V+K P G V+A K E + + E+Q L
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 662 LHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGIL 721
+ +V G +GE + E M G+L L + P ++SIA+ +G+
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV--IKGLT 118
Query: 722 YLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTP 781
YL + + HRD+K SNIL++ + K+ DFG+S G + ++ GT
Sbjct: 119 YLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS---------GQLIDSMANSFVGTR 167
Query: 782 GYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPI 817
Y+ PE + +SD++S+G+ +E+ G PI
Sbjct: 168 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 101/216 (46%), Gaps = 15/216 (6%)
Query: 604 MALATNNFNSSTQIGQGGYGKVYK-GILPDGTVVAVKRAQ-EGSLQGEKEFLTEIQFLSR 661
M L ++F +++G G G V+K P G V+A K E + + E+Q L
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 662 LHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGIL 721
+ +V G +GE + E M G+L L + P ++SIA+ +G+
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV--IKGLT 118
Query: 722 YLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTP 781
YL + + HRD+K SNIL++ + K+ DFG+S G + ++ GT
Sbjct: 119 YLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS---------GQLIDSMANSFVGTR 167
Query: 782 GYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPI 817
Y+ PE + +SD++S+G+ +E+ G PI
Sbjct: 168 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 76.6 bits (187), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 101/216 (46%), Gaps = 15/216 (6%)
Query: 604 MALATNNFNSSTQIGQGGYGKVYK-GILPDGTVVAVKRAQ-EGSLQGEKEFLTEIQFLSR 661
M L ++F +++G G G V+K P G V+A K E + + E+Q L
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 662 LHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGIL 721
+ +V G +GE + E M G+L L + P ++SIA+ +G+
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV--IKGLT 118
Query: 722 YLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTP 781
YL + + HRD+K SNIL++ + K+ DFG+S G + ++ GT
Sbjct: 119 YLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS---------GQLIDSMANSFVGTR 167
Query: 782 GYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPI 817
Y+ PE + +SD++S+G+ +E+ G PI
Sbjct: 168 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 116/286 (40%), Gaps = 40/286 (13%)
Query: 607 ATNNFNSSTQIGQGGYGKVYKGILPDGT-VVAVK---RAQEGSLQGEKEFLTEIQFLSRL 662
A +F +G+G +G VY ++A+K +AQ E + E++ S L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 663 HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSK----EPLGFAMRLSIALGSSR 718
H N++ L GY + L+ E+ GT+ +L SK + L+ AL
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS--- 125
Query: 719 GILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVK 778
Y H++ V HRDIK N+LL K+ADFG S A P+ +
Sbjct: 126 ---YCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHA---------PSSRRXXLC 170
Query: 779 GTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFS 838
GT YL PE +K D++SLGV+ E L G P E N ++ S
Sbjct: 171 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--------EANTYQETYKRIS 222
Query: 839 VIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIW 884
++ + +E I LK RP + EV LE W
Sbjct: 223 RVEFTFPDFVTEGARDLISRLLK---HNPSQRPMLREV---LEHPW 262
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 102/208 (49%), Gaps = 16/208 (7%)
Query: 611 FNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQ-EGSLQGEKEFLTEIQFLSRLHHRNLV 668
F+ ++G+G YG VYK I + G +VA+K+ E LQ E + EI + + ++V
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQ---EIIKEISIMQQCDSPHVV 87
Query: 669 SLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEAD 728
G + + +V E+ G++ D + ++K L +I + +G+ YLH
Sbjct: 88 KYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNK-TLTEDEIATILQSTLKGLEYLHFMRK 146
Query: 729 PPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEY 788
HRDIKA NILL+ + AK+ADFG++ + D V GTP ++ PE
Sbjct: 147 ---IHRDIKAGNILLNTEGHAKLADFGVA--GQLTDXMA-----KRNXVIGTPFWMAPEV 196
Query: 789 FLTHKLTDKSDVYSLGVVFLELLTGMQP 816
+D++SLG+ +E+ G P
Sbjct: 197 IQEIGYNCVADIWSLGITAIEMAEGKPP 224
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 100/227 (44%), Gaps = 17/227 (7%)
Query: 610 NFNSSTQIGQGGYGKVYKG-ILPDGTVVAVKRAQEGSLQGE---KEFLTEIQFLSRLHHR 665
+F +G+G + VY+ + G VA+K + ++ + E++ +L H
Sbjct: 12 DFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHP 71
Query: 666 NLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHT 725
+++ L Y ++ LV E NG + L + K P G+LYLH+
Sbjct: 72 SILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVK-PFSENEARHFMHQIITGMLYLHS 130
Query: 726 EADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLD 785
+ HRD+ SN+LL K+ADFGL+ +P H + GTP Y+
Sbjct: 131 HG---ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPH-----EKHYTLC--GTPNYIS 180
Query: 786 PEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG--KNIVREVNIA 830
PE +SDV+SLG +F LL G P KN + +V +A
Sbjct: 181 PEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLA 227
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 118/287 (41%), Gaps = 46/287 (16%)
Query: 609 NNFNSSTQIGQGGYGKVY-------KGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSR 661
+F+ +G+G +G VY K IL + + + G E + E++ S
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGV---EHQLRREVEIQSH 68
Query: 662 LHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSK----EPLGFAMRLSIALGSS 717
L H N++ L GY + L+ E+ GT+ +L S+ + L+ AL
Sbjct: 69 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALS-- 126
Query: 718 RGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVV 777
Y H++ V HRDIK N+LL K+ADFG S AP + T +
Sbjct: 127 ----YCHSKR---VIHRDIKPENLLLGSNGELKIADFGWSVHAP---------SSRRTTL 170
Query: 778 KGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMF 837
GT YL PE +K D++SLGV+ E L GM P E + ++
Sbjct: 171 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPF--------EAHTYQETYRRI 222
Query: 838 SVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIW 884
S ++ + +E I LK R +++EV LE W
Sbjct: 223 SRVEFTFPDFVTEGARDLISRLLK---HNASQRLTLAEV---LEHPW 263
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 103/223 (46%), Gaps = 28/223 (12%)
Query: 610 NFNSSTQIGQGGYGKVY--KGILPDGTVVAVKRAQEGSLQ--GEKEFLTEIQFLSRLHHR 665
N+ IG+G + KV + +L G VAVK + L ++ E++ + L+H
Sbjct: 16 NYRLQKTIGKGNFAKVKLARHVLT-GREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHP 74
Query: 666 NLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGIL---- 721
N+V L + E LV E+ S G + D L A + M+ A R I+
Sbjct: 75 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR------MKEKEARAKFRQIVSAVQ 128
Query: 722 YLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTP 781
Y H + + HRD+KA N+LLD K+ADFG S E V + T G+P
Sbjct: 129 YCHQKY---IVHRDLKAENLLLDGDMNIKIADFGFSN-------EFTVGNKLDTFC-GSP 177
Query: 782 GYLDPEYFLTHKLTD-KSDVYSLGVVFLELLTGMQPISHGKNI 823
Y PE F K + DV+SLGV+ L++G P G+N+
Sbjct: 178 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD-GQNL 219
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 110/238 (46%), Gaps = 38/238 (15%)
Query: 609 NNFNSSTQIGQGGYGKVYK----GILPDGT--VVAVKRAQEGSLQGEKE-FLTEIQFLSR 661
N +G G +GKV GI G VAVK +E + E+E ++E++ +++
Sbjct: 45 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQ 104
Query: 662 L-HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKE------------------ 702
L H N+V+L+G C G L++E+ G L + L +K ++
Sbjct: 105 LGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEE 164
Query: 703 ---PLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRL 759
L F L A ++G+ +L ++ HRD+ A N+L+ H K+ DFGL+R
Sbjct: 165 DLNVLTFEDLLCFAYQVAKGMEFLEFKS---CVHRDLAARNVLVTHGKVVKICDFGLAR- 220
Query: 760 APVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQP 816
+ D +V + VK ++ PE T KSDV+S G++ E+ + G+ P
Sbjct: 221 DIMSDSNYVVRGNARLPVK----WMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNP 274
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 95/213 (44%), Gaps = 22/213 (10%)
Query: 617 IGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCD 675
+G G YG+VYKG +A + + + E+E EI L + HHRN+ + G
Sbjct: 32 VGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFI 91
Query: 676 E------EGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADP 729
+ + + LV EF G++ D + L I RG+ +LH
Sbjct: 92 KKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHK-- 149
Query: 730 PVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYF 789
V HRDIK N+LL K+ DFG+S ++ V + + GTP ++ PE
Sbjct: 150 -VIHRDIKGQNVLLTENAEVKLVDFGVS-----AQLDRTVGRRNTFI--GTPYWMAPEVI 201
Query: 790 LTHKLTD-----KSDVYSLGVVFLELLTGMQPI 817
+ D KSD++SLG+ +E+ G P+
Sbjct: 202 ACDENPDATYDFKSDLWSLGITAIEMAEGAPPL 234
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 118/270 (43%), Gaps = 25/270 (9%)
Query: 611 FNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQ-EGSLQGEKEFLTEIQFLSRLHHRNLV 668
F +IG+G +G+V+KGI VVA+K E + ++ EI LS+ +
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVT 84
Query: 669 SLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEAD 728
G + + ++ E++ G+ D L A + A L L +G+ YLH+E
Sbjct: 85 KYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLKEIL---KGLDYLHSEKK 141
Query: 729 PPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEY 788
HRDIKA+N+LL + K+ADFG++ I+ GTP ++ PE
Sbjct: 142 ---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIK-------RNTFVGTPFWMAPEV 191
Query: 789 FLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYP 848
K+D++SLG+ +EL G P S + ++F + N +
Sbjct: 192 IQQSAYDSKADIWSLGITAIELAKGEPPNSD----------MHPMRVLFLIPKNNPPTLV 241
Query: 849 SECVEKFIKLALKCCQDETDARPSMSEVMR 878
+ + F + C + RP+ E+++
Sbjct: 242 GDFTKSFKEFIDACLNKDPSFRPTAKELLK 271
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 96/216 (44%), Gaps = 20/216 (9%)
Query: 610 NFNSSTQIGQGGYGKVYKG-ILPDGTVVAVKRAQEGSLQGEK---EFLTEIQFLSRLHHR 665
NF +IG+G + +VY+ L DG VA+K+ Q L K + + EI L +L+H
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 92
Query: 666 NLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKE----PLGFAMRLSIALGSSRGIL 721
N++ E+ E +V E G L + K+ P + + L S+ +
Sbjct: 93 NVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSA--LE 150
Query: 722 YLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTP 781
++H+ V HRDIK +N+ + K+ D GL R A S V GTP
Sbjct: 151 HMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRF-----FSSKTTAAHSLV--GTP 200
Query: 782 GYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPI 817
Y+ PE + KSD++SLG + E+ P
Sbjct: 201 YYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPF 236
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 100/214 (46%), Gaps = 15/214 (7%)
Query: 606 LATNNFNSSTQIGQGGYGKVYK-GILPDGTVVAVKRAQ-EGSLQGEKEFLTEIQFLSRLH 663
L ++F +++G G G V+K P G V+A K E + + E+Q L +
Sbjct: 65 LKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECN 124
Query: 664 HRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYL 723
+V G +GE + E M G+L L + P ++SIA+ +G+ YL
Sbjct: 125 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV--IKGLTYL 182
Query: 724 HTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGY 783
+ + HRD+K SNIL++ + K+ DFG+S G + ++ GT Y
Sbjct: 183 REKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS---------GQLIDSMANSFVGTRSY 231
Query: 784 LDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPI 817
+ PE + +SD++S+G+ +E+ G PI
Sbjct: 232 MSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 265
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 101/217 (46%), Gaps = 15/217 (6%)
Query: 606 LATNNFNSSTQIGQGGYGKVYK-GILPDGTVVAVKRAQ-EGSLQGEKEFLTEIQFLSRLH 663
L ++F +++G G G V+K P G V+A K E + + E+Q L +
Sbjct: 22 LKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECN 81
Query: 664 HRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYL 723
+V G +GE + E M G+L L + P ++SIA+ +G+ YL
Sbjct: 82 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV--IKGLTYL 139
Query: 724 HTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGY 783
+ + HRD+K SNIL++ + K+ DFG+S G + ++ GT Y
Sbjct: 140 REKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS---------GQLIDSMANSFVGTRSY 188
Query: 784 LDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 820
+ PE + +SD++S+G+ +E+ G PI G
Sbjct: 189 MSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIGSG 225
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 121/276 (43%), Gaps = 27/276 (9%)
Query: 617 IGQGGYGKVYKGILP----DGTVVAVKRAQ-EGSLQGEKEFLTEIQFLSRLHHRNLVSLV 671
+G+G +G+VY+G+ + VAVK + + +L +++F++E + L H ++V L+
Sbjct: 32 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 91
Query: 672 GYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPV 731
G +EE ++ E G L L ++K L + +L + + YL +
Sbjct: 92 GIIEEE-PTWIIMELYPYGELGHYLE-RNKNSLKVLTLVLYSLQICKAMAYLESIN---C 146
Query: 732 FHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT 791
HRDI NIL+ K+ DFGLSR D + ++V + ++ PE
Sbjct: 147 VHRDIAVRNILVASPECVKLGDFGLSRYIEDED------YYKASVTRLPIKWMSPESINF 200
Query: 792 HKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSE 850
+ T SDV+ V E+L+ G QP +N ++ + G+ P
Sbjct: 201 RRFTTASDVWMFAVCMWEILSFGKQPFFWLEN----------KDVIGVLEKGDRLPKPDL 250
Query: 851 CVEKFIKLALKCCQDETDARPSMSEVMRELESIWNM 886
C L +C + RP +E++ L ++ M
Sbjct: 251 CPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQM 286
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 74.3 bits (181), Expect = 3e-13, Method: Composition-based stats.
Identities = 57/186 (30%), Positives = 88/186 (47%), Gaps = 17/186 (9%)
Query: 635 VVAVKRAQEGSLQG-EKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLR 693
+VA+K + +L+G E EI L ++ H N+V+L + G L+ + +S G L
Sbjct: 45 LVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELF 104
Query: 694 DQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNIL---LDHKFTAK 750
D++ K A RL + + + YLH D + HRD+K N+L LD
Sbjct: 105 DRIVEKGFYTERDASRLIFQVLDA--VKYLH---DLGIVHRDLKPENLLYYSLDEDSKIM 159
Query: 751 VADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLEL 810
++DFGLS++ P V + GTPGY+ PE + D +S+GV+ L
Sbjct: 160 ISDFGLSKMED--------PGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYIL 211
Query: 811 LTGMQP 816
L G P
Sbjct: 212 LCGYPP 217
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 121/276 (43%), Gaps = 27/276 (9%)
Query: 617 IGQGGYGKVYKGILP----DGTVVAVKRAQ-EGSLQGEKEFLTEIQFLSRLHHRNLVSLV 671
+G+G +G+VY+G+ + VAVK + + +L +++F++E + L H ++V L+
Sbjct: 16 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 75
Query: 672 GYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPV 731
G +EE ++ E G L L ++K L + +L + + YL +
Sbjct: 76 GIIEEE-PTWIIMELYPYGELGHYLE-RNKNSLKVLTLVLYSLQICKAMAYLESIN---C 130
Query: 732 FHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT 791
HRDI NIL+ K+ DFGLSR D + ++V + ++ PE
Sbjct: 131 VHRDIAVRNILVASPECVKLGDFGLSRYIEDED------YYKASVTRLPIKWMSPESINF 184
Query: 792 HKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSE 850
+ T SDV+ V E+L+ G QP +N ++ + G+ P
Sbjct: 185 RRFTTASDVWMFAVCMWEILSFGKQPFFWLEN----------KDVIGVLEKGDRLPKPDL 234
Query: 851 CVEKFIKLALKCCQDETDARPSMSEVMRELESIWNM 886
C L +C + RP +E++ L ++ M
Sbjct: 235 CPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQM 270
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 118/254 (46%), Gaps = 29/254 (11%)
Query: 603 EMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTE--IQFLS 660
E +L +N IG+G YG VYKG L D VAVK S + F+ E I +
Sbjct: 7 EPSLDLDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVF---SFANRQNFINEKNIYRVP 62
Query: 661 RLHHRNLVS-LVG----YCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALG 715
+ H N+ +VG D E +LV E+ NG+L LS + + + +A
Sbjct: 63 LMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSD---WVSSCRLAHS 119
Query: 716 SSRGILYLHTEA------DPPVFHRDIKASNILLDHKFTAKVADFGLS------RLAPVP 763
+RG+ YLHTE P + HRD+ + N+L+ + T ++DFGLS RL
Sbjct: 120 VTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPG 179
Query: 764 DIEGIVPAHVSTVVKGTPGYLDPEYFL--THKLTDKSDVYSLGVVFLELLTGMQPISHGK 821
+ + + V T+ P L+ L + D+Y+LG+++ E+ + G+
Sbjct: 180 EEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGE 239
Query: 822 NIVREVNIAYQSSM 835
+ V E +A+Q+ +
Sbjct: 240 S-VPEYQMAFQTEV 252
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 121/276 (43%), Gaps = 27/276 (9%)
Query: 617 IGQGGYGKVYKGILP----DGTVVAVKRAQ-EGSLQGEKEFLTEIQFLSRLHHRNLVSLV 671
+G+G +G+VY+G+ + VAVK + + +L +++F++E + L H ++V L+
Sbjct: 20 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 79
Query: 672 GYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPV 731
G +EE ++ E G L L ++K L + +L + + YL +
Sbjct: 80 GIIEEE-PTWIIMELYPYGELGHYLE-RNKNSLKVLTLVLYSLQICKAMAYLES---INC 134
Query: 732 FHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT 791
HRDI NIL+ K+ DFGLSR D + ++V + ++ PE
Sbjct: 135 VHRDIAVRNILVASPECVKLGDFGLSRYIEDED------YYKASVTRLPIKWMSPESINF 188
Query: 792 HKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSE 850
+ T SDV+ V E+L+ G QP +N ++ + G+ P
Sbjct: 189 RRFTTASDVWMFAVCMWEILSFGKQPFFWLEN----------KDVIGVLEKGDRLPKPDL 238
Query: 851 CVEKFIKLALKCCQDETDARPSMSEVMRELESIWNM 886
C L +C + RP +E++ L ++ M
Sbjct: 239 CPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQM 274
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 102/223 (45%), Gaps = 28/223 (12%)
Query: 610 NFNSSTQIGQGGYGKV--YKGILPDGTVVAVKRAQEGSLQGE--KEFLTEIQFLSRLHHR 665
N+ IG+G + KV + IL G VAVK + L ++ E++ + L+H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHP 73
Query: 666 NLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGIL---- 721
N+V L + E LV E+ S G + D L A + M+ A R I+
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR------MKEKEARAKFRQIVSAVQ 127
Query: 722 YLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTP 781
Y H + + HRD+KA N+LLD K+ADFG S E + T G+P
Sbjct: 128 YCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSN-------EFTFGNKLDTFC-GSP 176
Query: 782 GYLDPEYFLTHKLTD-KSDVYSLGVVFLELLTGMQPISHGKNI 823
Y PE F K + DV+SLGV+ L++G P G+N+
Sbjct: 177 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD-GQNL 218
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 102/223 (45%), Gaps = 28/223 (12%)
Query: 610 NFNSSTQIGQGGYGKVY--KGILPDGTVVAVKRAQEGSLQGE--KEFLTEIQFLSRLHHR 665
N+ IG+G + KV + IL G VAVK + L ++ E++ + L+H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHP 73
Query: 666 NLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGIL---- 721
N+V L + E LV E+ S G + D L A + M+ A R I+
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR------MKEKEARAKFRQIVSAVQ 127
Query: 722 YLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTP 781
Y H + + HRD+KA N+LLD K+ADFG S E + T G+P
Sbjct: 128 YCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSN-------EFTFGNKLDTFC-GSP 176
Query: 782 GYLDPEYFLTHKLTD-KSDVYSLGVVFLELLTGMQPISHGKNI 823
Y PE F K + DV+SLGV+ L++G P G+N+
Sbjct: 177 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD-GQNL 218
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 122/282 (43%), Gaps = 26/282 (9%)
Query: 609 NNFNSSTQIGQGGYGKVYKGIL---PDGTVVAVKRAQEGSLQGE-KEFLTEIQFLSRLHH 664
N + ++G G +G V +G+ VA+K ++G+ + + +E + E Q + +L +
Sbjct: 336 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDN 395
Query: 665 RNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKE-PLGFAMRLSIALGSSRGILYL 723
+V L+G C E MLV E G L L K +E P+ L + S G+ YL
Sbjct: 396 PYIVRLIGVCQAEA-LMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQV--SMGMKYL 452
Query: 724 HTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGY 783
+ HR++ A N+LL ++ AK++DFGLS+ D + +K +
Sbjct: 453 EEKN---FVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLK----W 505
Query: 784 LDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDG 842
PE K + +SDV+S GV E L+ G +P K +M + G
Sbjct: 506 YAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG----------PEVMAFIEQG 555
Query: 843 NMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIW 884
P EC + L C + + RP V + + + +
Sbjct: 556 KRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACY 597
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 73.9 bits (180), Expect = 4e-13, Method: Composition-based stats.
Identities = 73/278 (26%), Positives = 121/278 (43%), Gaps = 26/278 (9%)
Query: 613 SSTQIGQGGYGKVYKGIL---PDGTVVAVKRAQEGSLQGE-KEFLTEIQFLSRLHHRNLV 668
+ ++G G +G V +G+ VA+K ++G+ + + +E + E Q + +L + +V
Sbjct: 14 ADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIV 73
Query: 669 SLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKE-PLGFAMRLSIALGSSRGILYLHTEA 727
L+G C E MLV E G L L K +E P+ L + S G+ YL
Sbjct: 74 RLIGVCQAEA-LMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQV--SMGMKYLE--- 127
Query: 728 DPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPE 787
+ HRD+ A N+LL ++ AK++DFGLS+ D + +K + PE
Sbjct: 128 EKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLK----WYAPE 183
Query: 788 YFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGS 846
K + +SDV+S GV E L+ G +P K +M + G
Sbjct: 184 CINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG----------PEVMAFIEQGKRME 233
Query: 847 YPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIW 884
P EC + L C + + RP V + + + +
Sbjct: 234 CPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACY 271
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 103/223 (46%), Gaps = 28/223 (12%)
Query: 610 NFNSSTQIGQGGYGKVY--KGILPDGTVVAVKRAQEGSLQ--GEKEFLTEIQFLSRLHHR 665
N+ IG+G + KV + IL G VA+K + L ++ E++ + L+H
Sbjct: 13 NYRLLKTIGKGNFAKVKLARHILT-GREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHP 71
Query: 666 NLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGIL---- 721
N+V L + E L+ E+ S G + D L A + M+ A R I+
Sbjct: 72 NIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGR------MKEKEARSKFRQIVSAVQ 125
Query: 722 YLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTP 781
Y H + + HRD+KA N+LLD K+ADFG S E V + T G+P
Sbjct: 126 YCHQKR---IVHRDLKAENLLLDADMNIKIADFGFSN-------EFTVGGKLDTFC-GSP 174
Query: 782 GYLDPEYFLTHKLTD-KSDVYSLGVVFLELLTGMQPISHGKNI 823
Y PE F K + DV+SLGV+ L++G P G+N+
Sbjct: 175 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD-GQNL 216
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 117/287 (40%), Gaps = 46/287 (16%)
Query: 609 NNFNSSTQIGQGGYGKVY-------KGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSR 661
+F+ +G+G +G VY K IL + + + G E + E++ S
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGV---EHQLRREVEIQSH 68
Query: 662 LHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSK----EPLGFAMRLSIALGSS 717
L H N++ L GY + L+ E+ GT+ +L S+ + L+ AL
Sbjct: 69 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALS-- 126
Query: 718 RGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVV 777
Y H++ V HRDIK N+LL K+ADFG S AP + +
Sbjct: 127 ----YCHSKR---VIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDTLC-------- 171
Query: 778 KGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMF 837
GT YL PE +K D++SLGV+ E L GM P E + ++
Sbjct: 172 -GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPF--------EAHTYQETYRRI 222
Query: 838 SVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIW 884
S ++ + +E I LK R +++EV LE W
Sbjct: 223 SRVEFTFPDFVTEGARDLISRLLK---HNASQRLTLAEV---LEHPW 263
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 102/227 (44%), Gaps = 28/227 (12%)
Query: 606 LATNNFNSSTQIGQGGYGKV--YKGILPDGTVVAVKRAQEGSLQGE--KEFLTEIQFLSR 661
L N+ IG+G + KV + IL G VAVK + L ++ E++ +
Sbjct: 4 LHIGNYRLLKTIGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSLQKLFREVRIMKV 62
Query: 662 LHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGIL 721
L+H N+V L + E LV E+ S G + D L A M+ A R I+
Sbjct: 63 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHG------WMKEKEARAKFRQIV 116
Query: 722 ----YLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVV 777
Y H + + HRD+KA N+LLD K+ADFG S E + T
Sbjct: 117 SAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSN-------EFTFGNKLDTFC 166
Query: 778 KGTPGYLDPEYFLTHKLTD-KSDVYSLGVVFLELLTGMQPISHGKNI 823
G+P Y PE F K + DV+SLGV+ L++G P G+N+
Sbjct: 167 -GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD-GQNL 211
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 100/214 (46%), Gaps = 15/214 (7%)
Query: 606 LATNNFNSSTQIGQGGYGKVYK-GILPDGTVVAVKRAQ-EGSLQGEKEFLTEIQFLSRLH 663
L ++F +++G G G V+K P G V+A K E + + E+Q L +
Sbjct: 30 LKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECN 89
Query: 664 HRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYL 723
+V G +GE + E M G+L L + P ++SIA+ +G+ YL
Sbjct: 90 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV--IKGLTYL 147
Query: 724 HTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGY 783
+ + HRD+K SNIL++ + K+ DFG+S G + ++ GT Y
Sbjct: 148 REKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS---------GQLIDSMANSFVGTRSY 196
Query: 784 LDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPI 817
+ PE + +SD++S+G+ +E+ G PI
Sbjct: 197 MSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 230
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 112/269 (41%), Gaps = 34/269 (12%)
Query: 616 QIGQGGYGKVYKGIL--PDGTVV--AVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLV 668
++G G +G V +G P G V AVK + L + +F+ E+ + L HRNL+
Sbjct: 19 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 78
Query: 669 SLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKE-PLGFAMRLSIALGSSRGILYLHTEA 727
L G +M V E G+L D+L LG R ++ + G YL ++
Sbjct: 79 RLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMG--YLESKR 135
Query: 728 DPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTP-GYLDP 786
HRD+ A N+LL + K+ DFGL R P D ++ H + P + P
Sbjct: 136 ---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEH-----RKVPFAWCAP 187
Query: 787 EYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVID--GN 843
E T + SD + GV E+ T G +P I S + ID G
Sbjct: 188 ESLKTRTFSHASDTWMFGVTLWEMFTYGQEPW-----------IGLNGSQILHKIDKEGE 236
Query: 844 MGSYPSECVEKFIKLALKCCQDETDARPS 872
P +C + + ++C + + RP+
Sbjct: 237 RLPRPEDCPQDIYNVMVQCWAHKPEDRPT 265
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 103/209 (49%), Gaps = 23/209 (11%)
Query: 617 IGQGGYGKVYKGILPDGTVVAVK---RAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGY 673
IG+G +G+V++G G VAVK +E S E E + L H N++ +
Sbjct: 12 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVM----LRHENILGFIAA 66
Query: 674 CDEEG----EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLH----- 724
+++ + LV ++ +G+L D L+ + G + +AL ++ G+ +LH
Sbjct: 67 DNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM---IKLALSTASGLAHLHMEIVG 123
Query: 725 TEADPPVFHRDIKASNILLDHKFTAKVADFGLS-RLAPVPDIEGIVPAH-VSTVVKGTPG 782
T+ P + HRD+K+ NIL+ T +AD GL+ R D I P H V T P
Sbjct: 124 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 183
Query: 783 YLDPEYFLTH-KLTDKSDVYSLGVVFLEL 810
LD + H + ++D+Y++G+VF E+
Sbjct: 184 VLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 103/209 (49%), Gaps = 23/209 (11%)
Query: 617 IGQGGYGKVYKGILPDGTVVAVK---RAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGY 673
IG+G +G+V++G G VAVK +E S E E + L H N++ +
Sbjct: 11 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVM----LRHENILGFIAA 65
Query: 674 CDEEG----EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLH----- 724
+++ + LV ++ +G+L D L+ + G + +AL ++ G+ +LH
Sbjct: 66 DNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM---IKLALSTASGLAHLHMEIVG 122
Query: 725 TEADPPVFHRDIKASNILLDHKFTAKVADFGLS-RLAPVPDIEGIVPAH-VSTVVKGTPG 782
T+ P + HRD+K+ NIL+ T +AD GL+ R D I P H V T P
Sbjct: 123 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 182
Query: 783 YLDPEYFLTH-KLTDKSDVYSLGVVFLEL 810
LD + H + ++D+Y++G+VF E+
Sbjct: 183 VLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 99/214 (46%), Gaps = 15/214 (7%)
Query: 606 LATNNFNSSTQIGQGGYGKVYK-GILPDGTVVAVKRAQ-EGSLQGEKEFLTEIQFLSRLH 663
L ++F +++G G G V K P G ++A K E + + E+Q L +
Sbjct: 13 LKDDDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECN 72
Query: 664 HRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYL 723
+V G +GE + E M G+L L + P ++SIA+ RG+ YL
Sbjct: 73 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAV--LRGLAYL 130
Query: 724 HTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGY 783
+ + HRD+K SNIL++ + K+ DFG+S G + ++ GT Y
Sbjct: 131 REKHQ--IMHRDVKPSNILVNSRGEIKLCDFGVS---------GQLIDSMANSFVGTRSY 179
Query: 784 LDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPI 817
+ PE + +SD++S+G+ +EL G PI
Sbjct: 180 MAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPI 213
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 102/223 (45%), Gaps = 28/223 (12%)
Query: 610 NFNSSTQIGQGGYGKVY--KGILPDGTVVAVKRAQEGSLQGE--KEFLTEIQFLSRLHHR 665
N+ IG+G + KV + IL G VAV+ + L ++ E++ + L+H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILT-GKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHP 73
Query: 666 NLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGIL---- 721
N+V L + E LV E+ S G + D L A + M+ A R I+
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR------MKEKEARAKFRQIVSAVQ 127
Query: 722 YLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTP 781
Y H + + HRD+KA N+LLD K+ADFG S E + T G+P
Sbjct: 128 YCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSN-------EFTFGNKLDTFC-GSP 176
Query: 782 GYLDPEYFLTHKLTD-KSDVYSLGVVFLELLTGMQPISHGKNI 823
Y PE F K + DV+SLGV+ L++G P G+N+
Sbjct: 177 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD-GQNL 218
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 103/209 (49%), Gaps = 23/209 (11%)
Query: 617 IGQGGYGKVYKGILPDGTVVAVK---RAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGY 673
IG+G +G+V++G G VAVK +E S E E + L H N++ +
Sbjct: 37 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVM----LRHENILGFIAA 91
Query: 674 CDEEG----EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLH----- 724
+++ + LV ++ +G+L D L+ + G + +AL ++ G+ +LH
Sbjct: 92 DNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM---IKLALSTASGLAHLHMEIVG 148
Query: 725 TEADPPVFHRDIKASNILLDHKFTAKVADFGLS-RLAPVPDIEGIVPAH-VSTVVKGTPG 782
T+ P + HRD+K+ NIL+ T +AD GL+ R D I P H V T P
Sbjct: 149 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 208
Query: 783 YLDPEYFLTH-KLTDKSDVYSLGVVFLEL 810
LD + H + ++D+Y++G+VF E+
Sbjct: 209 VLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 73.2 bits (178), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 103/209 (49%), Gaps = 23/209 (11%)
Query: 617 IGQGGYGKVYKGILPDGTVVAVK---RAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGY 673
IG+G +G+V++G G VAVK +E S E E + L H N++ +
Sbjct: 17 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVM----LRHENILGFIAA 71
Query: 674 CDEEG----EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLH----- 724
+++ + LV ++ +G+L D L+ + G + +AL ++ G+ +LH
Sbjct: 72 DNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM---IKLALSTASGLAHLHMEIVG 128
Query: 725 TEADPPVFHRDIKASNILLDHKFTAKVADFGLS-RLAPVPDIEGIVPAH-VSTVVKGTPG 782
T+ P + HRD+K+ NIL+ T +AD GL+ R D I P H V T P
Sbjct: 129 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 188
Query: 783 YLDPEYFLTH-KLTDKSDVYSLGVVFLEL 810
LD + H + ++D+Y++G+VF E+
Sbjct: 189 VLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 73.2 bits (178), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 97/210 (46%), Gaps = 21/210 (10%)
Query: 610 NFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKE-----FLTEIQFLSRLHH 664
++ +IG+G YG VYK G A+K+ + L+ E E + EI L L H
Sbjct: 3 KYHGLEKIGEGTYGVVYKAQNNYGETFALKKIR---LEKEDEGIPSTTIREISILKELKH 59
Query: 665 RNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLH 724
N+V L + +LV+E + +L + L S L GI Y H
Sbjct: 60 SNIVKLYDVIHTKKRLVLVFEHLDQDL--KKLLDVCEGGLESVTAKSFLLQLLNGIAYCH 117
Query: 725 TEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYL 784
D V HRD+K N+L++ + K+ADFGL+R +P V + VV T Y
Sbjct: 118 ---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIP-----VRKYTHEVV--TLWYR 167
Query: 785 DPEYFL-THKLTDKSDVYSLGVVFLELLTG 813
P+ + + K + D++S+G +F E++ G
Sbjct: 168 APDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 73.2 bits (178), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 103/209 (49%), Gaps = 23/209 (11%)
Query: 617 IGQGGYGKVYKGILPDGTVVAVK---RAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGY 673
IG+G +G+V++G G VAVK +E S E E + L H N++ +
Sbjct: 50 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVM----LRHENILGFIAA 104
Query: 674 CDEEG----EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLH----- 724
+++ + LV ++ +G+L D L+ + G + +AL ++ G+ +LH
Sbjct: 105 DNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM---IKLALSTASGLAHLHMEIVG 161
Query: 725 TEADPPVFHRDIKASNILLDHKFTAKVADFGLS-RLAPVPDIEGIVPAH-VSTVVKGTPG 782
T+ P + HRD+K+ NIL+ T +AD GL+ R D I P H V T P
Sbjct: 162 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 221
Query: 783 YLDPEYFLTH-KLTDKSDVYSLGVVFLEL 810
LD + H + ++D+Y++G+VF E+
Sbjct: 222 VLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 73.2 bits (178), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 88/186 (47%), Gaps = 17/186 (9%)
Query: 635 VVAVKRAQEGSLQG-EKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLR 693
+VA+K + +L+G E EI L ++ H N+V+L + G L+ + +S G L
Sbjct: 45 LVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELF 104
Query: 694 DQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNIL---LDHKFTAK 750
D++ K A RL + + + YLH D + HRD+K N+L LD
Sbjct: 105 DRIVEKGFYTERDASRLIFQVLDA--VKYLH---DLGIVHRDLKPENLLYYSLDEDSKIM 159
Query: 751 VADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLEL 810
++DFGLS++ P V + GTPGY+ PE + D +S+GV+ L
Sbjct: 160 ISDFGLSKMED--------PGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYIL 211
Query: 811 LTGMQP 816
L G P
Sbjct: 212 LCGYPP 217
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 73.2 bits (178), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 103/209 (49%), Gaps = 23/209 (11%)
Query: 617 IGQGGYGKVYKGILPDGTVVAVK---RAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGY 673
IG+G +G+V++G G VAVK +E S E E + L H N++ +
Sbjct: 14 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVM----LRHENILGFIAA 68
Query: 674 CDEEG----EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLH----- 724
+++ + LV ++ +G+L D L+ + G + +AL ++ G+ +LH
Sbjct: 69 DNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM---IKLALSTASGLAHLHMEIVG 125
Query: 725 TEADPPVFHRDIKASNILLDHKFTAKVADFGLS-RLAPVPDIEGIVPAH-VSTVVKGTPG 782
T+ P + HRD+K+ NIL+ T +AD GL+ R D I P H V T P
Sbjct: 126 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 185
Query: 783 YLDPEYFLTH-KLTDKSDVYSLGVVFLEL 810
LD + H + ++D+Y++G+VF E+
Sbjct: 186 VLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 72.8 bits (177), Expect = 7e-13, Method: Composition-based stats.
Identities = 72/269 (26%), Positives = 114/269 (42%), Gaps = 34/269 (12%)
Query: 616 QIGQGGYGKVYKG--ILPDGTVV--AVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLV 668
++G G +G V +G P G V AVK + L + +F+ E+ + L HRNL+
Sbjct: 25 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 84
Query: 669 SLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKE-PLGFAMRLSIALGSSRGILYLHTEA 727
L G +M V E G+L D+L LG R ++ + + G+ YL ++
Sbjct: 85 RLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQV--AEGMGYLESKR 141
Query: 728 DPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTP-GYLDP 786
HRD+ A N+LL + K+ DFGL R P D ++ H + P + P
Sbjct: 142 ---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEH-----RKVPFAWCAP 193
Query: 787 EYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVID--GN 843
E T + SD + GV E+ T G +P I S + ID G
Sbjct: 194 ESLKTRTFSHASDTWMFGVTLWEMFTYGQEPW-----------IGLNGSQILHKIDKEGE 242
Query: 844 MGSYPSECVEKFIKLALKCCQDETDARPS 872
P +C + + ++C + + RP+
Sbjct: 243 RLPRPEDCPQDIYNVMVQCWAHKPEDRPT 271
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 97/211 (45%), Gaps = 21/211 (9%)
Query: 609 NNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKE-----FLTEIQFLSRLH 663
++ +IG+G YG VYK G A+K+ + L+ E E + EI L L
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIR---LEKEDEGIPSTTIREISILKELK 58
Query: 664 HRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYL 723
H N+V L + +LV+E + +L + L S L GI Y
Sbjct: 59 HSNIVKLYDVIHTKKRLVLVFEHLDQDL--KKLLDVCEGGLESVTAKSFLLQLLNGIAYC 116
Query: 724 HTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGY 783
H D V HRD+K N+L++ + K+ADFGL+R +P V + VV T Y
Sbjct: 117 H---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIP-----VRKYTHEVV--TLWY 166
Query: 784 LDPEYFL-THKLTDKSDVYSLGVVFLELLTG 813
P+ + + K + D++S+G +F E++ G
Sbjct: 167 RAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 99/213 (46%), Gaps = 15/213 (7%)
Query: 606 LATNNFNSSTQIGQGGYGKVYK-GILPDGTVVAVKRAQ-EGSLQGEKEFLTEIQFLSRLH 663
L ++F +++G G G V+K P G V+A K E + + E+Q L +
Sbjct: 6 LKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECN 65
Query: 664 HRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYL 723
+V G +GE + E M G+L L + P ++SIA+ +G+ YL
Sbjct: 66 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV--IKGLTYL 123
Query: 724 HTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGY 783
+ + HRD+K SNIL++ + K+ DFG+S G + ++ GT Y
Sbjct: 124 REKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS---------GQLIDEMANEFVGTRSY 172
Query: 784 LDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQP 816
+ PE + +SD++S+G+ +E+ G P
Sbjct: 173 MSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 205
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 72.8 bits (177), Expect = 8e-13, Method: Composition-based stats.
Identities = 72/269 (26%), Positives = 114/269 (42%), Gaps = 34/269 (12%)
Query: 616 QIGQGGYGKVYKG--ILPDGTVV--AVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLV 668
++G G +G V +G P G V AVK + L + +F+ E+ + L HRNL+
Sbjct: 15 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 74
Query: 669 SLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKE-PLGFAMRLSIALGSSRGILYLHTEA 727
L G +M V E G+L D+L LG R ++ + + G+ YL ++
Sbjct: 75 RLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQV--AEGMGYLESKR 131
Query: 728 DPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTP-GYLDP 786
HRD+ A N+LL + K+ DFGL R P D ++ H + P + P
Sbjct: 132 ---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEH-----RKVPFAWCAP 183
Query: 787 EYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVID--GN 843
E T + SD + GV E+ T G +P I S + ID G
Sbjct: 184 ESLKTRTFSHASDTWMFGVTLWEMFTYGQEPW-----------IGLNGSQILHKIDKEGE 232
Query: 844 MGSYPSECVEKFIKLALKCCQDETDARPS 872
P +C + + ++C + + RP+
Sbjct: 233 RLPRPEDCPQDIYNVMVQCWAHKPEDRPT 261
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 103/218 (47%), Gaps = 17/218 (7%)
Query: 606 LATNNFNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQGEKEF---LTEIQFLSR 661
L +NF +G+G +GKV + + G + AVK ++ + + + +TE + LS
Sbjct: 20 LGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSL 79
Query: 662 LHHRNLVSLVGYCDEEGEQML-VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGI 720
+ ++ + C + +++ V EF++ G L + + A + + S+ +
Sbjct: 80 ARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISA--L 137
Query: 721 LYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGT 780
++LH D + +RD+K N+LLDH+ K+ADFG+ + EGI + GT
Sbjct: 138 MFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCK-------EGICNGVTTATFCGT 187
Query: 781 PGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPIS 818
P Y+ PE D +++GV+ E+L G P
Sbjct: 188 PDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFE 225
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 72.8 bits (177), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 97/208 (46%), Gaps = 24/208 (11%)
Query: 617 IGQGGYGKVYKGILPDGT----VVAVKRAQEGSLQG-EKEFLTEIQFLSRLHHRNLVSLV 671
+G G + +V IL + +VA+K + +L+G E EI L ++ H N+V+L
Sbjct: 26 LGTGAFSEV---ILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALD 82
Query: 672 GYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPV 731
+ G L+ + +S G L D++ K A RL + + + YLH D +
Sbjct: 83 DIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDA--VKYLH---DLGI 137
Query: 732 FHRDIKASNIL---LDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEY 788
HRD+K N+L LD ++DFGLS++ P V + GTPGY+ PE
Sbjct: 138 VHRDLKPENLLYYSLDEDSKIMISDFGLSKMED--------PGSVLSTACGTPGYVAPEV 189
Query: 789 FLTHKLTDKSDVYSLGVVFLELLTGMQP 816
+ D +S+GV+ LL G P
Sbjct: 190 LAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 72.8 bits (177), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 97/208 (46%), Gaps = 24/208 (11%)
Query: 617 IGQGGYGKVYKGILPDGT----VVAVKRAQEGSLQG-EKEFLTEIQFLSRLHHRNLVSLV 671
+G G + +V IL + +VA+K + +L+G E EI L ++ H N+V+L
Sbjct: 26 LGTGAFSEV---ILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALD 82
Query: 672 GYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPV 731
+ G L+ + +S G L D++ K A RL + + + YLH D +
Sbjct: 83 DIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDA--VKYLH---DLGI 137
Query: 732 FHRDIKASNIL---LDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEY 788
HRD+K N+L LD ++DFGLS++ P V + GTPGY+ PE
Sbjct: 138 VHRDLKPENLLYYSLDEDSKIMISDFGLSKMED--------PGSVLSTACGTPGYVAPEV 189
Query: 789 FLTHKLTDKSDVYSLGVVFLELLTGMQP 816
+ D +S+GV+ LL G P
Sbjct: 190 LAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 72.8 bits (177), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 97/210 (46%), Gaps = 21/210 (10%)
Query: 610 NFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKE-----FLTEIQFLSRLHH 664
++ +IG+G YG VYK G A+K+ + L+ E E + EI L L H
Sbjct: 3 KYHGLEKIGEGTYGVVYKAQNNYGETFALKKIR---LEKEDEGIPSTTIREISILKELKH 59
Query: 665 RNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLH 724
N+V L + +LV+E + +L + L S L GI Y H
Sbjct: 60 SNIVKLYDVIHTKKRLVLVFEHLDQDL--KKLLDVCEGGLESVTAKSFLLQLLNGIAYCH 117
Query: 725 TEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYL 784
D V HRD+K N+L++ + K+ADFGL+R +P V + +V T Y
Sbjct: 118 ---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIP-----VRKYTHEIV--TLWYR 167
Query: 785 DPEYFL-THKLTDKSDVYSLGVVFLELLTG 813
P+ + + K + D++S+G +F E++ G
Sbjct: 168 APDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 99/223 (44%), Gaps = 28/223 (12%)
Query: 610 NFNSSTQIGQGGYGKVY--KGILPDGTVVAVKRAQEGSLQGE--KEFLTEIQFLSRLHHR 665
N+ IG+G + KV + IL G VAVK + L ++ E++ + L+H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHP 73
Query: 666 NLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGIL---- 721
N+V L + E LV E+ S G + D L A + M+ A R I+
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR------MKEKEARAKFRQIVSAVQ 127
Query: 722 YLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTP 781
Y H + + HRD+KA N+LLD K+ADFG S + G P
Sbjct: 128 YCHQKF---IVHRDLKAENLLLDADMNIKIADFGFS--------NEFTFGNKLDAFCGAP 176
Query: 782 GYLDPEYFLTHKLTD-KSDVYSLGVVFLELLTGMQPISHGKNI 823
Y PE F K + DV+SLGV+ L++G P G+N+
Sbjct: 177 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD-GQNL 218
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 72.4 bits (176), Expect = 1e-12, Method: Composition-based stats.
Identities = 72/269 (26%), Positives = 114/269 (42%), Gaps = 34/269 (12%)
Query: 616 QIGQGGYGKVYKG--ILPDGTVV--AVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLV 668
++G G +G V +G P G V AVK + L + +F+ E+ + L HRNL+
Sbjct: 19 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 78
Query: 669 SLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKE-PLGFAMRLSIALGSSRGILYLHTEA 727
L G +M V E G+L D+L LG R ++ + + G+ YL ++
Sbjct: 79 RLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQV--AEGMGYLESKR 135
Query: 728 DPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTP-GYLDP 786
HRD+ A N+LL + K+ DFGL R P D ++ H + P + P
Sbjct: 136 ---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEH-----RKVPFAWCAP 187
Query: 787 EYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVID--GN 843
E T + SD + GV E+ T G +P I S + ID G
Sbjct: 188 ESLKTRTFSHASDTWMFGVTLWEMFTYGQEPW-----------IGLNGSQILHKIDKEGE 236
Query: 844 MGSYPSECVEKFIKLALKCCQDETDARPS 872
P +C + + ++C + + RP+
Sbjct: 237 RLPRPEDCPQDIYNVMVQCWAHKPEDRPT 265
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 72.4 bits (176), Expect = 1e-12, Method: Composition-based stats.
Identities = 72/269 (26%), Positives = 114/269 (42%), Gaps = 34/269 (12%)
Query: 616 QIGQGGYGKVYKG--ILPDGTVV--AVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLV 668
++G G +G V +G P G V AVK + L + +F+ E+ + L HRNL+
Sbjct: 15 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 74
Query: 669 SLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKE-PLGFAMRLSIALGSSRGILYLHTEA 727
L G +M V E G+L D+L LG R ++ + + G+ YL ++
Sbjct: 75 RLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQV--AEGMGYLESKR 131
Query: 728 DPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTP-GYLDP 786
HRD+ A N+LL + K+ DFGL R P D ++ H + P + P
Sbjct: 132 ---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEH-----RKVPFAWCAP 183
Query: 787 EYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVID--GN 843
E T + SD + GV E+ T G +P I S + ID G
Sbjct: 184 ESLKTRTFSHASDTWMFGVTLWEMFTYGQEPW-----------IGLNGSQILHKIDKEGE 232
Query: 844 MGSYPSECVEKFIKLALKCCQDETDARPS 872
P +C + + ++C + + RP+
Sbjct: 233 RLPRPEDCPQDIYNVMVQCWAHKPEDRPT 261
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 72.4 bits (176), Expect = 1e-12, Method: Composition-based stats.
Identities = 72/269 (26%), Positives = 114/269 (42%), Gaps = 34/269 (12%)
Query: 616 QIGQGGYGKVYKG--ILPDGTVV--AVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLV 668
++G G +G V +G P G V AVK + L + +F+ E+ + L HRNL+
Sbjct: 25 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 84
Query: 669 SLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKE-PLGFAMRLSIALGSSRGILYLHTEA 727
L G +M V E G+L D+L LG R ++ + + G+ YL ++
Sbjct: 85 RLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQV--AEGMGYLESKR 141
Query: 728 DPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTP-GYLDP 786
HRD+ A N+LL + K+ DFGL R P D ++ H + P + P
Sbjct: 142 ---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEH-----RKVPFAWCAP 193
Query: 787 EYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVID--GN 843
E T + SD + GV E+ T G +P I S + ID G
Sbjct: 194 ESLKTRTFSHASDTWMFGVTLWEMFTYGQEPW-----------IGLNGSQILHKIDKEGE 242
Query: 844 MGSYPSECVEKFIKLALKCCQDETDARPS 872
P +C + + ++C + + RP+
Sbjct: 243 RLPRPEDCPQDIYNVMVQCWAHKPEDRPT 271
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 72.4 bits (176), Expect = 1e-12, Method: Composition-based stats.
Identities = 72/269 (26%), Positives = 114/269 (42%), Gaps = 34/269 (12%)
Query: 616 QIGQGGYGKVYKG--ILPDGTVV--AVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLV 668
++G G +G V +G P G V AVK + L + +F+ E+ + L HRNL+
Sbjct: 15 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 74
Query: 669 SLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKE-PLGFAMRLSIALGSSRGILYLHTEA 727
L G +M V E G+L D+L LG R ++ + + G+ YL ++
Sbjct: 75 RLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQV--AEGMGYLESKR 131
Query: 728 DPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTP-GYLDP 786
HRD+ A N+LL + K+ DFGL R P D ++ H + P + P
Sbjct: 132 ---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEH-----RKVPFAWCAP 183
Query: 787 EYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVID--GN 843
E T + SD + GV E+ T G +P I S + ID G
Sbjct: 184 ESLKTRTFSHASDTWMFGVTLWEMFTYGQEPW-----------IGLNGSQILHKIDKEGE 232
Query: 844 MGSYPSECVEKFIKLALKCCQDETDARPS 872
P +C + + ++C + + RP+
Sbjct: 233 RLPRPEDCPQDIYNVMVQCWAHKPEDRPT 261
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 108/264 (40%), Gaps = 32/264 (12%)
Query: 572 AHMKN-YHAISRRRHSSKTSIKIDGVRSFTYGEMALATNNFNSSTQ-------------- 616
+HM+N Y +R R + K G RS ++ F ++ Q
Sbjct: 19 SHMENLYFQGARARQENGMPEKPPGPRSPQREPQRVSHEQFRAALQLVVDPGDPRSYLDN 78
Query: 617 ---IGQGGYGKV-YKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVG 672
IG+G G V + G +VAVK+ Q + E+ + H N+V +
Sbjct: 79 FIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYN 138
Query: 673 YCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVF 732
E +V EF+ G L D ++ A ++ L + + LH + V
Sbjct: 139 SYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA---AVCLAVLQALSVLHAQG---VI 192
Query: 733 HRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH 792
HRDIK+ +ILL H K++DFG + VP V GTP ++ PE
Sbjct: 193 HRDIKSDSILLTHDGRVKLSDFGFC-----AQVSKEVPRRKXLV--GTPYWMAPELISRL 245
Query: 793 KLTDKSDVYSLGVVFLELLTGMQP 816
+ D++SLG++ +E++ G P
Sbjct: 246 PYGPEVDIWSLGIMVIEMVDGEPP 269
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 72.0 bits (175), Expect = 1e-12, Method: Composition-based stats.
Identities = 56/221 (25%), Positives = 107/221 (48%), Gaps = 28/221 (12%)
Query: 616 QIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYC 674
++G G +GKVYK + G + A K + S + ++++ EI+ L+ H +V L+G
Sbjct: 18 ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAY 77
Query: 675 DEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHR 734
+G+ ++ EF G + D + + L + + +LH++ + HR
Sbjct: 78 YHDGKLWIMIEFCPGGAV-DAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKR---IIHR 133
Query: 735 DIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVK-----GTPGYLDPEYF 789
D+KA N+L+ + ++ADFG+S ++ T+ K GTP ++ PE
Sbjct: 134 DLKAGNVLMTLEGDIRLADFGVS------------AKNLKTLQKRDSFIGTPYWMAPEVV 181
Query: 790 LTHKLTD-----KSDVYSLGVVFLELLTGMQPISHGKNIVR 825
+ + D K+D++SLG+ +E + ++P H N +R
Sbjct: 182 MCETMKDTPYDYKADIWSLGITLIE-MAQIEPPHHELNPMR 221
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 72.0 bits (175), Expect = 1e-12, Method: Composition-based stats.
Identities = 56/221 (25%), Positives = 107/221 (48%), Gaps = 28/221 (12%)
Query: 616 QIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYC 674
++G G +GKVYK + G + A K + S + ++++ EI+ L+ H +V L+G
Sbjct: 26 ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAY 85
Query: 675 DEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHR 734
+G+ ++ EF G + D + + L + + +LH++ + HR
Sbjct: 86 YHDGKLWIMIEFCPGGAV-DAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKR---IIHR 141
Query: 735 DIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVK-----GTPGYLDPEYF 789
D+KA N+L+ + ++ADFG+S ++ T+ K GTP ++ PE
Sbjct: 142 DLKAGNVLMTLEGDIRLADFGVS------------AKNLKTLQKRDSFIGTPYWMAPEVV 189
Query: 790 LTHKLTD-----KSDVYSLGVVFLELLTGMQPISHGKNIVR 825
+ + D K+D++SLG+ +E + ++P H N +R
Sbjct: 190 MCETMKDTPYDYKADIWSLGITLIE-MAQIEPPHHELNPMR 229
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 101/223 (45%), Gaps = 28/223 (12%)
Query: 610 NFNSSTQIGQGGYGKV--YKGILPDGTVVAVKRAQEGSLQ--GEKEFLTEIQFLSRLHHR 665
N+ IG+G + KV + IL G VA+K + L ++ E++ + L+H
Sbjct: 16 NYRLLKTIGKGNFAKVKLARHILT-GREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHP 74
Query: 666 NLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGIL---- 721
N+V L + E L+ E+ S G + D L A + M+ A R I+
Sbjct: 75 NIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGR------MKEKEARSKFRQIVSAVQ 128
Query: 722 YLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTP 781
Y H + + HRD+KA N+LLD K+ADFG S E V + G P
Sbjct: 129 YCHQKR---IVHRDLKAENLLLDADMNIKIADFGFSN-------EFTVGGKLDAFC-GAP 177
Query: 782 GYLDPEYFLTHKLTD-KSDVYSLGVVFLELLTGMQPISHGKNI 823
Y PE F K + DV+SLGV+ L++G P G+N+
Sbjct: 178 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD-GQNL 219
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 132/311 (42%), Gaps = 52/311 (16%)
Query: 603 EMALATNNFNSSTQIGQGGYGKVYKGIL------PDGTVVAVKRAQ---EGSLQGEKEFL 653
E++L+ F ++G+ +GKVYKG L VA+K + EG L+ +EF
Sbjct: 22 EISLSAVRFME--ELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLR--EEFR 77
Query: 654 TEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSK------------ 701
E +RL H N+V L+G ++ +++ + S+G L + L +S
Sbjct: 78 HEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRT 137
Query: 702 -----EPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGL 756
EP F + + + G+ YL + V H+D+ N+L+ K K++D GL
Sbjct: 138 VKSALEPPDF---VHLVAQIAAGMEYLSSHH---VVHKDLATRNVLVYDKLNVKISDLGL 191
Query: 757 SRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQ 815
R D ++ + + ++ PE + K + SD++S GVV E+ + G+Q
Sbjct: 192 FREVYAADYYKLLGNSLLPI-----RWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQ 246
Query: 816 PISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSE 875
P N ++ + + + P +C L ++C + RP +
Sbjct: 247 PYCGYSN----------QDVVEMIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKD 296
Query: 876 VMRELESIWNM 886
+ L + N+
Sbjct: 297 IHSRLRAWGNL 307
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 97/212 (45%), Gaps = 13/212 (6%)
Query: 608 TNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQ-EGSLQGEKEFLTEIQFLSRLHHR 665
+++ +G+G YG+V + VAVK + ++ + EI L+H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 64
Query: 666 NLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHT 725
N+V G+ E Q L E+ S G L D++ P A R L + G++YLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 122
Query: 726 EADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLD 785
+ HRDIK N+LLD + K++DFGL+ + + E ++ + GT Y+
Sbjct: 123 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL-----NKMXGTLPYVA 174
Query: 786 PEYFLTHKL-TDKSDVYSLGVVFLELLTGMQP 816
PE + + DV+S G+V +L G P
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 72.0 bits (175), Expect = 2e-12, Method: Composition-based stats.
Identities = 66/215 (30%), Positives = 102/215 (47%), Gaps = 21/215 (9%)
Query: 616 QIGQGGYGKVYKGILPDGTV-VAVKRAQEGSL-QGEKE-FLTEIQFLSRLHHRNLVSLVG 672
+IG+G + VYKG+ + TV VA Q+ L + E++ F E + L L H N+V
Sbjct: 33 EIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYD 92
Query: 673 YCDE--EGEQ--MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEAD 728
+ +G++ +LV E ++GTL+ L K + + S +G+ +LHT
Sbjct: 93 SWESTVKGKKCIVLVTELXTSGTLKTYL--KRFKVXKIKVLRSWCRQILKGLQFLHTRT- 149
Query: 729 PPVFHRDIKASNILLDHKF-TAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPE 787
PP+ HRD+K NI + + K+ D GL+ L A + V GTP + PE
Sbjct: 150 PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK---------RASFAKAVIGTPEFXAPE 200
Query: 788 YFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKN 822
+ K + DVY+ G LE T P S +N
Sbjct: 201 XY-EEKYDESVDVYAFGXCXLEXATSEYPYSECQN 234
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 102/223 (45%), Gaps = 27/223 (12%)
Query: 616 QIGQGGYGK-VYKGILPDGTVVAVKRAQ--EGSLQGEKEFLTEIQFLSRLHHRNLVSLVG 672
+IG+G +GK + DG +K S + +E E+ L+ + H N+V
Sbjct: 31 KIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRE 90
Query: 673 YCDEEGEQMLVYEFMSNGTLRDQLSAKS------KEPLGFAMRLSIALGSSRGILYLHTE 726
+E G +V ++ G L +++A+ + L + +++ +AL ++H
Sbjct: 91 SFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALK------HVH-- 142
Query: 727 ADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDP 786
D + HRDIK+ NI L T ++ DFG++R+ ++ GTP YL P
Sbjct: 143 -DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLN-------STVELARACIGTPYYLSP 194
Query: 787 EYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG--KNIVREV 827
E +KSD+++LG V EL T G KN+V ++
Sbjct: 195 EICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKI 237
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 71.6 bits (174), Expect = 2e-12, Method: Composition-based stats.
Identities = 66/235 (28%), Positives = 99/235 (42%), Gaps = 35/235 (14%)
Query: 609 NNFNSSTQIGQGGYGKVY-------KGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSR 661
++F+ +G+G +G VY K I+ + + +EG E + EI+ S
Sbjct: 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGV---EHQLRREIEIQSH 70
Query: 662 LHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSK----EPLGFAMRLSIALGSS 717
L H N++ + Y + L+ EF G L +L + F L+ AL
Sbjct: 71 LRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADAL--- 127
Query: 718 RGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVV 777
H + V HRDIK N+L+ +K K+ADFG S A P+ +
Sbjct: 128 ------HYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHA---------PSLRRRXM 172
Query: 778 KGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPI---SHGKNIVREVNI 829
GT YL PE +K D++ GV+ E L GM P SH + R VN+
Sbjct: 173 CGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNV 227
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 71.6 bits (174), Expect = 2e-12, Method: Composition-based stats.
Identities = 66/235 (28%), Positives = 99/235 (42%), Gaps = 35/235 (14%)
Query: 609 NNFNSSTQIGQGGYGKVY-------KGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSR 661
++F+ +G+G +G VY K I+ + + +EG E + EI+ S
Sbjct: 15 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGV---EHQLRREIEIQSH 71
Query: 662 LHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSK----EPLGFAMRLSIALGSS 717
L H N++ + Y + L+ EF G L +L + F L+ AL
Sbjct: 72 LRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADAL--- 128
Query: 718 RGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVV 777
H + V HRDIK N+L+ +K K+ADFG S A P+ +
Sbjct: 129 ------HYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHA---------PSLRRRXM 173
Query: 778 KGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPI---SHGKNIVREVNI 829
GT YL PE +K D++ GV+ E L GM P SH + R VN+
Sbjct: 174 CGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNV 228
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 92/218 (42%), Gaps = 17/218 (7%)
Query: 605 ALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQ-----FL 659
+L +F+ IG+G Y KV L + R + L + E + +Q F
Sbjct: 48 SLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFE 107
Query: 660 SRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRG 719
+H LV L E V E+++ G L + + K P A S + S
Sbjct: 108 QASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEI--SLA 165
Query: 720 ILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKG 779
+ YLH + +RD+K N+LLD + K+ D+G+ + EG+ P ++ G
Sbjct: 166 LNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCK-------EGLRPGDTTSTFCG 215
Query: 780 TPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPI 817
TP Y+ PE D ++LGV+ E++ G P
Sbjct: 216 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 253
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 126/274 (45%), Gaps = 33/274 (12%)
Query: 611 FNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQ-EGSLQGEKEFLTEIQFLSRLHHRNLV 668
F +IG+G +G+V+KGI VVA+K E + ++ EI LS+ +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 669 SLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEAD 728
G ++ + ++ E++ G+ D L PL +I +G+ YLH+E
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPG---PLDETQIATILREILKGLDYLHSEKK 125
Query: 729 PPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEY 788
HRDIKA+N+LL K+ADFG++ I+ +T V GTP ++ PE
Sbjct: 126 ---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKR------NTFV-GTPFWMAPEV 175
Query: 789 FLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN----M 844
K+D++SLG+ +EL G P S + ++F + N
Sbjct: 176 IKQSAYDSKADIWSLGITAIELARGEPPHSE----------LHPMKVLFLIPKNNPPTLE 225
Query: 845 GSYPSECVEKFIKLALKCCQDETDARPSMSEVMR 878
G+Y S+ +++F++ C E RP+ E+++
Sbjct: 226 GNY-SKPLKEFVE---ACLNKEPSFRPTAKELLK 255
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 128/316 (40%), Gaps = 50/316 (15%)
Query: 609 NNFNSSTQIGQGGYGKVYKGILP--DGTVV--AVKRAQEGSLQGE--KEFLTEIQFLSRL 662
F +G+G +G V + L DG+ V AVK + + +EFL E +
Sbjct: 23 QQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEF 82
Query: 663 HHRNLVSLVGYCDEEGEQ------MLVYEFMSNGTLRDQLSAKS------KEPLGFAMRL 710
H ++ LVG + M++ FM +G L L A PL +R
Sbjct: 83 DHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRF 142
Query: 711 SIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVP 770
+ + G+ YL + HRD+ A N +L T VADFGLSR D
Sbjct: 143 MVDIAC--GMEYLSSRN---FIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGD------ 191
Query: 771 AHVSTVVKGTPGYLDPEYFLTHKLTD-----KSDVYSLGVVFLELLT-GMQPISHGKNIV 824
+G L ++ L D SDV++ GV E++T G P + +N
Sbjct: 192 ----YYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIEN-- 245
Query: 825 REVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIW 884
+ + +I GN P EC+E+ L +C + RPS + + ELE+I
Sbjct: 246 --------AEIYNYLIGGNRLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENIL 297
Query: 885 NMMPE-SDTKTPEFIN 899
+ S ++ P +IN
Sbjct: 298 GHLSVLSTSQDPLYIN 313
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 104/232 (44%), Gaps = 40/232 (17%)
Query: 609 NNFNSSTQIGQGGYGKV-----YKGILPDGTV-VAVKRAQEGSLQGEKE-FLTEIQFLSR 661
N + +G G +GKV Y I D + VAVK + + E+E ++E++ LS
Sbjct: 39 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 98
Query: 662 L-HHRNLVSLVGYCDEEGEQMLVYEFMSNGTL-------RDQLSAKSKEP---------L 704
L +H N+V+L+G C G +++ E+ G L RD P L
Sbjct: 99 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 158
Query: 705 GFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 764
LS + ++G+ +L A HRD+ A NILL H K+ DFGL+R D
Sbjct: 159 DLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLAR-----D 210
Query: 765 IEGIVPAHVSTVVKGTP----GYLDPEYFLTHKLTDKSDVYSLGVVFLELLT 812
I+ + VVKG ++ PE T +SDV+S G+ EL +
Sbjct: 211 IKN----DSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 258
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 97/212 (45%), Gaps = 13/212 (6%)
Query: 608 TNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQ-EGSLQGEKEFLTEIQFLSRLHHR 665
+++ +G+G YG+V + VAVK + ++ + EI L+H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 666 NLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHT 725
N+V G+ E Q L E+ S G L D++ P A R L + G++YLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 122
Query: 726 EADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLD 785
+ HRDIK N+LLD + K++DFGL+ + + E ++ + GT Y+
Sbjct: 123 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL-----NKMXGTLPYVA 174
Query: 786 PEYFLTHKL-TDKSDVYSLGVVFLELLTGMQP 816
PE + + DV+S G+V +L G P
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 100/222 (45%), Gaps = 13/222 (5%)
Query: 608 TNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQ-EGSLQGEKEFLTEIQFLSRLHHR 665
+++ +G+G YG+V + VAVK + ++ + EI L+H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 666 NLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHT 725
N+V G+ E Q L E+ S G L D++ P A R L + G++YLH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 123
Query: 726 EADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLD 785
+ HRDIK N+LLD + K++DFGL+ + + E ++ + GT Y+
Sbjct: 124 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL-----NKMCGTLPYVA 175
Query: 786 PEYFLTHKL-TDKSDVYSLGVVFLELLTGMQPISHGKNIVRE 826
PE + + DV+S G+V +L G P + +E
Sbjct: 176 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 217
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 97/212 (45%), Gaps = 13/212 (6%)
Query: 608 TNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQ-EGSLQGEKEFLTEIQFLSRLHHR 665
+++ +G+G YG+V + VAVK + ++ + EI L+H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 64
Query: 666 NLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHT 725
N+V G+ E Q L E+ S G L D++ P A R L + G++YLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 122
Query: 726 EADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLD 785
+ HRDIK N+LLD + K++DFGL+ + + E ++ + GT Y+
Sbjct: 123 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL-----NKMCGTLPYVA 174
Query: 786 PEYFLTHKL-TDKSDVYSLGVVFLELLTGMQP 816
PE + + DV+S G+V +L G P
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 100/222 (45%), Gaps = 13/222 (5%)
Query: 608 TNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQ-EGSLQGEKEFLTEIQFLSRLHHR 665
+++ +G+G YG+V + VAVK + ++ + EI L+H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 666 NLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHT 725
N+V G+ E Q L E+ S G L D++ P A R L + G++YLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 122
Query: 726 EADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLD 785
+ HRDIK N+LLD + K++DFGL+ + + E ++ + GT Y+
Sbjct: 123 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL-----NKMCGTLPYVA 174
Query: 786 PEYFLTHKL-TDKSDVYSLGVVFLELLTGMQPISHGKNIVRE 826
PE + + DV+S G+V +L G P + +E
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 130/310 (41%), Gaps = 52/310 (16%)
Query: 603 EMALATNNFNSSTQIGQGGYGKVYKGIL----PDGTVVAV-----KRAQEGSLQGEKEFL 653
E++L+ F ++G+ +GKVYKG L P AV K EG L+ +EF
Sbjct: 5 EISLSAVRFME--ELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLR--EEFR 60
Query: 654 TEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSK------------ 701
E +RL H N+V L+G ++ +++ + S+G L + L +S
Sbjct: 61 HEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRT 120
Query: 702 -----EPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGL 756
EP F + + + G+ YL + V H+D+ N+L+ K K++D GL
Sbjct: 121 VKSALEPPDF---VHLVAQIAAGMEYLSSHH---VVHKDLATRNVLVYDKLNVKISDLGL 174
Query: 757 SRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQ 815
R D ++ + + ++ PE + K + SD++S GVV E+ + G+Q
Sbjct: 175 FREVYAADYYKLLGNSLLPI-----RWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQ 229
Query: 816 PISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSE 875
P N ++ + + + P +C L ++C + RP +
Sbjct: 230 PYCGYSN----------QDVVEMIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKD 279
Query: 876 VMRELESIWN 885
+ L + N
Sbjct: 280 IHSRLRAWGN 289
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 104/232 (44%), Gaps = 40/232 (17%)
Query: 609 NNFNSSTQIGQGGYGKV-----YKGILPDGTV-VAVKRAQEGSLQGEKE-FLTEIQFLSR 661
N + +G G +GKV Y I D + VAVK + + E+E ++E++ LS
Sbjct: 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 82
Query: 662 L-HHRNLVSLVGYCDEEGEQMLVYEFMSNGTL-------RDQLSAKSKEP---------L 704
L +H N+V+L+G C G +++ E+ G L RD P L
Sbjct: 83 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 142
Query: 705 GFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 764
LS + ++G+ +L A HRD+ A NILL H K+ DFGL+R D
Sbjct: 143 DLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLAR-----D 194
Query: 765 IEGIVPAHVSTVVKGTP----GYLDPEYFLTHKLTDKSDVYSLGVVFLELLT 812
I+ + VVKG ++ PE T +SDV+S G+ EL +
Sbjct: 195 IKN----DSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 242
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 104/232 (44%), Gaps = 40/232 (17%)
Query: 609 NNFNSSTQIGQGGYGKV-----YKGILPDGTV-VAVKRAQEGSLQGEKE-FLTEIQFLSR 661
N + +G G +GKV Y I D + VAVK + + E+E ++E++ LS
Sbjct: 41 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 100
Query: 662 L-HHRNLVSLVGYCDEEGEQMLVYEFMSNGTL-------RDQLSAKSKEP---------L 704
L +H N+V+L+G C G +++ E+ G L RD P L
Sbjct: 101 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 160
Query: 705 GFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 764
LS + ++G+ +L A HRD+ A NILL H K+ DFGL+R D
Sbjct: 161 DLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLAR-----D 212
Query: 765 IEGIVPAHVSTVVKGTP----GYLDPEYFLTHKLTDKSDVYSLGVVFLELLT 812
I+ + VVKG ++ PE T +SDV+S G+ EL +
Sbjct: 213 IKN----DSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 260
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 135/321 (42%), Gaps = 38/321 (11%)
Query: 611 FNSSTQIGQGGYGKV---YKGILPDGTVVAVKRAQEGSLQGE-KEFLTEIQFLSRLHHRN 666
+ + + IG+G YG V Y + + VA+K+ Q + L EI+ L R H N
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 82
Query: 667 LVSLVGYCDEEG-EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHT 725
++ + EQM + + D + L RG+ Y+H+
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 142
Query: 726 EADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA-PVPDIEGIVPAHVSTVVKGTPGYL 784
V HRD+K SN+LL+ K+ DFGL+R+A P D G + +V+ T Y
Sbjct: 143 AN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA-----TRWYR 194
Query: 785 DPEYFLTHKLTDKS-DVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 843
PE L K KS D++S+G + E+L+ +PI GK+ + ++N I G
Sbjct: 195 APEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLN----------HILGI 243
Query: 844 MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN-MMPESDTKTPEFINXXX 902
+GS E + I L AR + + + + WN + P +D+K + ++
Sbjct: 244 LGSPSQEDLNXIINLK---------ARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKML 294
Query: 903 XXXXXXXXXXXXMLKHPYVSS 923
L HPY+
Sbjct: 295 TFNPHKRIEVEQALAHPYLEQ 315
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 71.2 bits (173), Expect = 2e-12, Method: Composition-based stats.
Identities = 66/235 (28%), Positives = 99/235 (42%), Gaps = 35/235 (14%)
Query: 609 NNFNSSTQIGQGGYGKVY-------KGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSR 661
++F+ +G+G +G VY K I+ + + +EG E + EI+ S
Sbjct: 14 DDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGV---EHQLRREIEIQSH 70
Query: 662 LHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSK----EPLGFAMRLSIALGSS 717
L H N++ + Y + L+ EF G L +L + F L+ AL
Sbjct: 71 LRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADAL--- 127
Query: 718 RGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVV 777
H + V HRDIK N+L+ +K K+ADFG S A P+ +
Sbjct: 128 ------HYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHA---------PSLRRRXM 172
Query: 778 KGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPI---SHGKNIVREVNI 829
GT YL PE +K D++ GV+ E L GM P SH + R VN+
Sbjct: 173 CGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNV 227
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 101/223 (45%), Gaps = 28/223 (12%)
Query: 610 NFNSSTQIGQGGYGKVY--KGILPDGTVVAVKRAQEGSLQGE--KEFLTEIQFLSRLHHR 665
N+ IG+G + KV + IL G VAV+ + L ++ E++ + L+H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILT-GKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHP 73
Query: 666 NLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGIL---- 721
N+V L + E LV E+ S G + D L A + M+ A R I+
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR------MKEKEARAKFRQIVSAVQ 127
Query: 722 YLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTP 781
Y H + + HRD+KA N+LLD K+ADFG S E + G+P
Sbjct: 128 YCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSN-------EFTFGNKLDEFC-GSP 176
Query: 782 GYLDPEYFLTHKLTD-KSDVYSLGVVFLELLTGMQPISHGKNI 823
Y PE F K + DV+SLGV+ L++G P G+N+
Sbjct: 177 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD-GQNL 218
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 126/274 (45%), Gaps = 33/274 (12%)
Query: 611 FNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQ-EGSLQGEKEFLTEIQFLSRLHHRNLV 668
F +IG+G +G+V+KGI VVA+K E + ++ EI LS+ +
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 88
Query: 669 SLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEAD 728
G ++ + ++ E++ G+ D L PL +I +G+ YLH+E
Sbjct: 89 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPG---PLDETQIATILREILKGLDYLHSEKK 145
Query: 729 PPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEY 788
HRDIKA+N+LL K+ADFG++ I+ +T V GTP ++ PE
Sbjct: 146 ---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKR------NTFV-GTPFWMAPEV 195
Query: 789 FLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN----M 844
K+D++SLG+ +EL G P S + ++F + N
Sbjct: 196 IKQSAYDSKADIWSLGITAIELARGEPPHSE----------LHPMKVLFLIPKNNPPTLE 245
Query: 845 GSYPSECVEKFIKLALKCCQDETDARPSMSEVMR 878
G+Y S+ +++F++ C E RP+ E+++
Sbjct: 246 GNY-SKPLKEFVE---ACLNKEPSFRPTAKELLK 275
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 123/274 (44%), Gaps = 33/274 (12%)
Query: 611 FNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQ-EGSLQGEKEFLTEIQFLSRLHHRNLV 668
F +IG+G +G+V+KGI VVA+K E + ++ EI LS+ +
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 83
Query: 669 SLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEAD 728
G ++ + ++ E++ G+ D L PL +I +G+ YLH+E
Sbjct: 84 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPG---PLDETQIATILREILKGLDYLHSEKK 140
Query: 729 PPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEY 788
HRDIKA+N+LL K+ADFG++ I+ GTP ++ PE
Sbjct: 141 ---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK-------RNXFVGTPFWMAPEV 190
Query: 789 FLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN----M 844
K+D++SLG+ +EL G P S + ++F + N
Sbjct: 191 IKQSAYDSKADIWSLGITAIELARGEPPHSE----------LHPMKVLFLIPKNNPPTLE 240
Query: 845 GSYPSECVEKFIKLALKCCQDETDARPSMSEVMR 878
G+Y S+ +++F++ C E RP+ E+++
Sbjct: 241 GNY-SKPLKEFVE---ACLNKEPSFRPTAKELLK 270
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 123/274 (44%), Gaps = 33/274 (12%)
Query: 611 FNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQ-EGSLQGEKEFLTEIQFLSRLHHRNLV 668
F +IG+G +G+V+KGI VVA+K E + ++ EI LS+ +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 669 SLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEAD 728
G ++ + ++ E++ G+ D L PL +I +G+ YLH+E
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPG---PLDETQIATILREILKGLDYLHSEKK 125
Query: 729 PPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEY 788
HRDIKA+N+LL K+ADFG++ I+ GTP ++ PE
Sbjct: 126 ---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK-------RNXFVGTPFWMAPEV 175
Query: 789 FLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN----M 844
K+D++SLG+ +EL G P S + ++F + N
Sbjct: 176 IKQSAYDSKADIWSLGITAIELARGEPPHSE----------LHPMKVLFLIPKNNPPTLE 225
Query: 845 GSYPSECVEKFIKLALKCCQDETDARPSMSEVMR 878
G+Y S+ +++F++ C E RP+ E+++
Sbjct: 226 GNY-SKPLKEFVE---ACLNKEPSFRPTAKELLK 255
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 97/212 (45%), Gaps = 13/212 (6%)
Query: 608 TNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQ-EGSLQGEKEFLTEIQFLSRLHHR 665
+++ +G+G YG+V + VAVK + ++ + EI L+H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 666 NLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHT 725
N+V G+ E Q L E+ S G L D++ P A R L + G++YLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 122
Query: 726 EADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLD 785
+ HRDIK N+LLD + K++DFGL+ + + E ++ + GT Y+
Sbjct: 123 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL-----NKMXGTLPYVA 174
Query: 786 PEYFLTHKL-TDKSDVYSLGVVFLELLTGMQP 816
PE + + DV+S G+V +L G P
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 104/232 (44%), Gaps = 40/232 (17%)
Query: 609 NNFNSSTQIGQGGYGKV-----YKGILPDGTV-VAVKRAQEGSLQGEKE-FLTEIQFLSR 661
N + +G G +GKV Y I D + VAVK + + E+E ++E++ LS
Sbjct: 46 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 105
Query: 662 L-HHRNLVSLVGYCDEEGEQMLVYEFMSNGTL-------RDQLSAKSKEP---------L 704
L +H N+V+L+G C G +++ E+ G L RD P L
Sbjct: 106 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 165
Query: 705 GFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 764
LS + ++G+ +L A HRD+ A NILL H K+ DFGL+R D
Sbjct: 166 DLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLAR-----D 217
Query: 765 IEGIVPAHVSTVVKGTP----GYLDPEYFLTHKLTDKSDVYSLGVVFLELLT 812
I+ + VVKG ++ PE T +SDV+S G+ EL +
Sbjct: 218 IKN----DSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 97/212 (45%), Gaps = 13/212 (6%)
Query: 608 TNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQ-EGSLQGEKEFLTEIQFLSRLHHR 665
+++ +G+G YG+V + VAVK + ++ + EI L+H
Sbjct: 4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 63
Query: 666 NLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHT 725
N+V G+ E Q L E+ S G L D++ P A R L + G++YLH
Sbjct: 64 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 121
Query: 726 EADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLD 785
+ HRDIK N+LLD + K++DFGL+ + + E ++ + GT Y+
Sbjct: 122 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL-----NKMCGTLPYVA 173
Query: 786 PEYFLTHKL-TDKSDVYSLGVVFLELLTGMQP 816
PE + + DV+S G+V +L G P
Sbjct: 174 PELLKRREFHAEPVDVWSCGIVLTAMLAGELP 205
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 97/212 (45%), Gaps = 13/212 (6%)
Query: 608 TNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQ-EGSLQGEKEFLTEIQFLSRLHHR 665
+++ +G+G YG+V + VAVK + ++ + EI L+H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 666 NLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHT 725
N+V G+ E Q L E+ S G L D++ P A R L + G++YLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 122
Query: 726 EADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLD 785
+ HRDIK N+LLD + K++DFGL+ + + E ++ + GT Y+
Sbjct: 123 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL-----NKMCGTLPYVA 174
Query: 786 PEYFLTHKL-TDKSDVYSLGVVFLELLTGMQP 816
PE + + DV+S G+V +L G P
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 124/278 (44%), Gaps = 47/278 (16%)
Query: 617 IGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD 675
+G+G YG VY G L + +A+K E + + EI L H+N+V +G
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 89
Query: 676 EEGEQMLVYEFMSNGTLRDQLSAK------SKEPLGFAMRLSIALGSSRGILYLHTEADP 729
E G + E + G+L L +K +++ +GF + + G+ YLH D
Sbjct: 90 ENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQIL-----EGLKYLH---DN 141
Query: 730 PVFHRDIKASNILLD-HKFTAKVADFGLS-RLAPVPDIEGIVPAHVSTVVKGTPGYLDPE 787
+ HRDIK N+L++ + K++DFG S RLA GI P + GT Y+ PE
Sbjct: 142 QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLA------GINPC--TETFTGTLQYMAPE 193
Query: 788 YFLTHKLTDK--------SDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSV 839
+ DK +D++SLG +E+ TG P + E A MF V
Sbjct: 194 ------IIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYE----LGEPQAAMFKVGMFKV 243
Query: 840 IDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVM 877
S +E + FI LKC + + D R ++++
Sbjct: 244 HPEIPESMSAE-AKAFI---LKCFEPDPDKRACANDLL 277
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 97/212 (45%), Gaps = 13/212 (6%)
Query: 608 TNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQ-EGSLQGEKEFLTEIQFLSRLHHR 665
+++ +G+G YG+V + VAVK + ++ + EI L+H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 666 NLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHT 725
N+V G+ E Q L E+ S G L D++ P A R L + G++YLH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 123
Query: 726 EADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLD 785
+ HRDIK N+LLD + K++DFGL+ + + E ++ + GT Y+
Sbjct: 124 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL-----NKMCGTLPYVA 175
Query: 786 PEYFLTHKL-TDKSDVYSLGVVFLELLTGMQP 816
PE + + DV+S G+V +L G P
Sbjct: 176 PELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 135/321 (42%), Gaps = 38/321 (11%)
Query: 611 FNSSTQIGQGGYGKV---YKGILPDGTVVAVKRAQEGSLQGE-KEFLTEIQFLSRLHHRN 666
+ + + IG+G YG V Y + + VA+K+ Q + L EI+ L R H N
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 82
Query: 667 LVSLVGYCDEEG-EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHT 725
++ + EQM + + D + L RG+ Y+H+
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 142
Query: 726 EADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA-PVPDIEGIVPAHVSTVVKGTPGYL 784
V HRD+K SN+LL+ K+ DFGL+R+A P D G + +V+ T Y
Sbjct: 143 AN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA-----TRWYR 194
Query: 785 DPEYFLTHKLTDKS-DVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 843
PE L K KS D++S+G + E+L+ +PI GK+ + ++N I G
Sbjct: 195 APEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLN----------HILGI 243
Query: 844 MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN-MMPESDTKTPEFINXXX 902
+GS E + I L AR + + + + WN + P +D+K + ++
Sbjct: 244 LGSPSQEDLNCIINLK---------ARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKML 294
Query: 903 XXXXXXXXXXXXMLKHPYVSS 923
L HPY+
Sbjct: 295 TFNPHKRIEVEQALAHPYLEQ 315
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 97/212 (45%), Gaps = 13/212 (6%)
Query: 608 TNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQ-EGSLQGEKEFLTEIQFLSRLHHR 665
+++ +G+G YG+V + VAVK + ++ + EI L+H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 666 NLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHT 725
N+V G+ E Q L E+ S G L D++ P A R L + G++YLH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 123
Query: 726 EADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLD 785
+ HRDIK N+LLD + K++DFGL+ + + E ++ + GT Y+
Sbjct: 124 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL-----NKMCGTLPYVA 175
Query: 786 PEYFLTHKL-TDKSDVYSLGVVFLELLTGMQP 816
PE + + DV+S G+V +L G P
Sbjct: 176 PELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 135/321 (42%), Gaps = 38/321 (11%)
Query: 611 FNSSTQIGQGGYGKV---YKGILPDGTVVAVKRAQEGSLQGE-KEFLTEIQFLSRLHHRN 666
+ + + IG+G YG V Y + + VA+K+ Q + L EI+ L R H N
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 84
Query: 667 LVSLVGYCDEEG-EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHT 725
++ + EQM + + D + L RG+ Y+H+
Sbjct: 85 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 144
Query: 726 EADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA-PVPDIEGIVPAHVSTVVKGTPGYL 784
V HRD+K SN+LL+ K+ DFGL+R+A P D G + +V+ T Y
Sbjct: 145 AN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA-----TRWYR 196
Query: 785 DPEYFLTHKLTDKS-DVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 843
PE L K KS D++S+G + E+L+ +PI GK+ + ++N I G
Sbjct: 197 APEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLN----------HILGI 245
Query: 844 MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN-MMPESDTKTPEFINXXX 902
+GS E + I L AR + + + + WN + P +D+K + ++
Sbjct: 246 LGSPSQEDLNCIINLK---------ARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKML 296
Query: 903 XXXXXXXXXXXXMLKHPYVSS 923
L HPY+
Sbjct: 297 TFNPHKRIEVEQALAHPYLEQ 317
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 97/212 (45%), Gaps = 13/212 (6%)
Query: 608 TNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQ-EGSLQGEKEFLTEIQFLSRLHHR 665
+++ +G+G YG+V + VAVK + ++ + EI L+H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 666 NLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHT 725
N+V G+ E Q L E+ S G L D++ P A R L + G++YLH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 123
Query: 726 EADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLD 785
+ HRDIK N+LLD + K++DFGL+ + + E ++ + GT Y+
Sbjct: 124 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL-----NKMCGTLPYVA 175
Query: 786 PEYFLTHKL-TDKSDVYSLGVVFLELLTGMQP 816
PE + + DV+S G+V +L G P
Sbjct: 176 PELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 135/321 (42%), Gaps = 38/321 (11%)
Query: 611 FNSSTQIGQGGYGKV---YKGILPDGTVVAVKRAQEGSLQGE-KEFLTEIQFLSRLHHRN 666
+ + + IG+G YG V Y + + VA+K+ Q + L EI+ L R H N
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 82
Query: 667 LVSLVGYCDEEG-EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHT 725
++ + EQM + + D + L RG+ Y+H+
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 142
Query: 726 EADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA-PVPDIEGIVPAHVSTVVKGTPGYL 784
V HRD+K SN+LL+ K+ DFGL+R+A P D G + +V+ T Y
Sbjct: 143 AN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA-----TRWYR 194
Query: 785 DPEYFLTHKLTDKS-DVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 843
PE L K KS D++S+G + E+L+ +PI GK+ + ++N I G
Sbjct: 195 APEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLN----------HILGI 243
Query: 844 MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN-MMPESDTKTPEFINXXX 902
+GS E + I L AR + + + + WN + P +D+K + ++
Sbjct: 244 LGSPSQEDLNCIINLK---------ARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKML 294
Query: 903 XXXXXXXXXXXXMLKHPYVSS 923
L HPY+
Sbjct: 295 TFNPHKRIEVEQALAHPYLEQ 315
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 135/321 (42%), Gaps = 38/321 (11%)
Query: 611 FNSSTQIGQGGYGKV---YKGILPDGTVVAVKRAQEGSLQGE-KEFLTEIQFLSRLHHRN 666
+ + + IG+G YG V Y + + VA+K+ Q + L EI+ L R H N
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 82
Query: 667 LVSLVGYCDEEG-EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHT 725
++ + EQM + + D + L RG+ Y+H+
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 142
Query: 726 EADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA-PVPDIEGIVPAHVSTVVKGTPGYL 784
V HRD+K SN+LL+ K+ DFGL+R+A P D G + +V+ T Y
Sbjct: 143 AN---VLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVA-----TRWYR 194
Query: 785 DPEYFLTHKLTDKS-DVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 843
PE L K KS D++S+G + E+L+ +PI GK+ + ++N I G
Sbjct: 195 APEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLN----------HILGI 243
Query: 844 MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN-MMPESDTKTPEFINXXX 902
+GS E + I L AR + + + + WN + P +D+K + ++
Sbjct: 244 LGSPSQEDLNXIINLK---------ARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKML 294
Query: 903 XXXXXXXXXXXXMLKHPYVSS 923
L HPY+
Sbjct: 295 TFNPHKRIEVEQALAHPYLEQ 315
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 70.9 bits (172), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 124/278 (44%), Gaps = 47/278 (16%)
Query: 617 IGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD 675
+G+G YG VY G L + +A+K E + + EI L H+N+V +G
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 75
Query: 676 EEGEQMLVYEFMSNGTLRDQLSAK------SKEPLGFAMRLSIALGSSRGILYLHTEADP 729
E G + E + G+L L +K +++ +GF + + G+ YLH D
Sbjct: 76 ENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQIL-----EGLKYLH---DN 127
Query: 730 PVFHRDIKASNILLD-HKFTAKVADFGLS-RLAPVPDIEGIVPAHVSTVVKGTPGYLDPE 787
+ HRDIK N+L++ + K++DFG S RLA GI P + GT Y+ PE
Sbjct: 128 QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLA------GINPC--TETFTGTLQYMAPE 179
Query: 788 YFLTHKLTDK--------SDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSV 839
+ DK +D++SLG +E+ TG P + E A MF V
Sbjct: 180 ------IIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYE----LGEPQAAMFKVGMFKV 229
Query: 840 IDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVM 877
S +E + FI LKC + + D R ++++
Sbjct: 230 HPEIPESMSAEA-KAFI---LKCFEPDPDKRACANDLL 263
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 135/321 (42%), Gaps = 38/321 (11%)
Query: 611 FNSSTQIGQGGYGKV---YKGILPDGTVVAVKRAQEGSLQGE-KEFLTEIQFLSRLHHRN 666
+ + + IG+G YG V Y + + VA+K+ Q + L EI+ L R H N
Sbjct: 33 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 90
Query: 667 LVSLVGYCDEEG-EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHT 725
++ + EQM + + D + L RG+ Y+H+
Sbjct: 91 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 150
Query: 726 EADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA-PVPDIEGIVPAHVSTVVKGTPGYL 784
V HRD+K SN+LL+ K+ DFGL+R+A P D G + +V+ T Y
Sbjct: 151 AN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA-----TRWYR 202
Query: 785 DPEYFLTHKLTDKS-DVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 843
PE L K KS D++S+G + E+L+ +PI GK+ + ++N I G
Sbjct: 203 APEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLN----------HILGI 251
Query: 844 MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN-MMPESDTKTPEFINXXX 902
+GS E + I L AR + + + + WN + P +D+K + ++
Sbjct: 252 LGSPSQEDLNCIINLK---------ARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKML 302
Query: 903 XXXXXXXXXXXXMLKHPYVSS 923
L HPY+
Sbjct: 303 TFNPHKRIEVEQALAHPYLEQ 323
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 135/321 (42%), Gaps = 38/321 (11%)
Query: 611 FNSSTQIGQGGYGKV---YKGILPDGTVVAVKRAQEGSLQGE-KEFLTEIQFLSRLHHRN 666
+ + + IG+G YG V Y + + VA+K+ Q + L EI+ L R H N
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 82
Query: 667 LVSLVGYCDEEG-EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHT 725
++ + EQM + + D + L RG+ Y+H+
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 142
Query: 726 EADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA-PVPDIEGIVPAHVSTVVKGTPGYL 784
V HRD+K SN+LL+ K+ DFGL+R+A P D G + +V+ T Y
Sbjct: 143 AN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA-----TRWYR 194
Query: 785 DPEYFLTHKLTDKS-DVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 843
PE L K KS D++S+G + E+L+ +PI GK+ + ++N I G
Sbjct: 195 APEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLN----------HILGI 243
Query: 844 MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN-MMPESDTKTPEFINXXX 902
+GS E + I L AR + + + + WN + P +D+K + ++
Sbjct: 244 LGSPSQEDLNCIINLK---------ARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKML 294
Query: 903 XXXXXXXXXXXXMLKHPYVSS 923
L HPY+
Sbjct: 295 TFNPHKRIEVEQALAHPYLEQ 315
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 136/321 (42%), Gaps = 38/321 (11%)
Query: 611 FNSSTQIGQGGYGKV---YKGILPDGTVVAVKRAQEGSLQGE-KEFLTEIQFLSRLHHRN 666
+ + + IG+G YG V Y + + VA+K+ Q + L EI+ L R H N
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 102
Query: 667 LVSLVGYCDEEG-EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHT 725
++ + EQM +++ D + L RG+ Y+H+
Sbjct: 103 IIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 162
Query: 726 EADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA-PVPDIEGIVPAHVSTVVKGTPGYL 784
V HRD+K SN+LL+ K+ DFGL+R+A P D G + +V+ T Y
Sbjct: 163 AN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA-----TRWYR 214
Query: 785 DPEYFLTHKLTDKS-DVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 843
PE L K KS D++S+G + E+L+ +PI GK+ + ++N I G
Sbjct: 215 APEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLN----------HILGI 263
Query: 844 MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN-MMPESDTKTPEFINXXX 902
+GS E + I L AR + + + + WN + P +D+K + ++
Sbjct: 264 LGSPSQEDLNCIINLK---------ARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKML 314
Query: 903 XXXXXXXXXXXXMLKHPYVSS 923
L HPY+
Sbjct: 315 TFNPHKRIEVEQALAHPYLEQ 335
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 135/321 (42%), Gaps = 38/321 (11%)
Query: 611 FNSSTQIGQGGYGKV---YKGILPDGTVVAVKRAQEGSLQG-EKEFLTEIQFLSRLHHRN 666
+ + + IG+G YG V Y + + VA+K+ Q + L EI+ L R H N
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHEN 86
Query: 667 LVSLVGYCDEEG-EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHT 725
++ + EQM + + D + L RG+ Y+H+
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 146
Query: 726 EADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA-PVPDIEGIVPAHVSTVVKGTPGYL 784
V HRD+K SN+LL+ K+ DFGL+R+A P D G + +V+ T Y
Sbjct: 147 AN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA-----TRWYR 198
Query: 785 DPEYFLTHKLTDKS-DVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 843
PE L K KS D++S+G + E+L+ +PI GK+ + ++N I G
Sbjct: 199 APEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLN----------HILGI 247
Query: 844 MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN-MMPESDTKTPEFINXXX 902
+GS E + I L AR + + + + WN + P +D+K + ++
Sbjct: 248 LGSPSQEDLNCIINLK---------ARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKML 298
Query: 903 XXXXXXXXXXXXMLKHPYVSS 923
L HPY+
Sbjct: 299 TFNPHKRIEVEQALAHPYLEQ 319
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 91/207 (43%), Gaps = 14/207 (6%)
Query: 611 FNSSTQIGQGGYGKV-YKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVS 669
++ +IG+G G V + G +VAVK+ Q + E+ + H N+V
Sbjct: 33 LDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVE 92
Query: 670 LVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADP 729
+ E +V EF+ G L D ++ A ++ L + + LH +
Sbjct: 93 MYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA---AVCLAVLQALSVLHAQG-- 147
Query: 730 PVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYF 789
V HRDIK+ +ILL H K++DFG + VP V GTP ++ PE
Sbjct: 148 -VIHRDIKSDSILLTHDGRVKLSDFGFC-----AQVSKEVPRRKXLV--GTPYWMAPELI 199
Query: 790 LTHKLTDKSDVYSLGVVFLELLTGMQP 816
+ D++SLG++ +E++ G P
Sbjct: 200 SRLPYGPEVDIWSLGIMVIEMVDGEPP 226
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 102/228 (44%), Gaps = 32/228 (14%)
Query: 609 NNFNSSTQIGQGGYGKV-----YKGILPDGTV-VAVKRAQEGSLQGEKE-FLTEIQFLSR 661
N + +G G +GKV Y I D + VAVK + + E+E ++E++ LS
Sbjct: 46 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 105
Query: 662 L-HHRNLVSLVGYCDEEGEQMLVYEFMSNGTL-------RDQLSAKSKEP---------L 704
L +H N+V+L+G C G +++ E+ G L RD P L
Sbjct: 106 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 165
Query: 705 GFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 764
LS + ++G+ +L A HRD+ A NILL H K+ DFGL+R D
Sbjct: 166 DLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARHIK-ND 221
Query: 765 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT 812
+V + VK ++ PE T +SDV+S G+ EL +
Sbjct: 222 SNYVVKGNARLPVK----WMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 91/207 (43%), Gaps = 14/207 (6%)
Query: 611 FNSSTQIGQGGYGKV-YKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVS 669
++ +IG+G G V + G +VAVK+ Q + E+ + H N+V
Sbjct: 31 LDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVE 90
Query: 670 LVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADP 729
+ E +V EF+ G L D ++ A ++ L + + LH +
Sbjct: 91 MYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA---AVCLAVLQALSVLHAQG-- 145
Query: 730 PVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYF 789
V HRDIK+ +ILL H K++DFG + VP V GTP ++ PE
Sbjct: 146 -VIHRDIKSDSILLTHDGRVKLSDFGFC-----AQVSKEVPRRKXLV--GTPYWMAPELI 197
Query: 790 LTHKLTDKSDVYSLGVVFLELLTGMQP 816
+ D++SLG++ +E++ G P
Sbjct: 198 SRLPYGPEVDIWSLGIMVIEMVDGEPP 224
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 139/324 (42%), Gaps = 44/324 (13%)
Query: 611 FNSSTQIGQGGYGKV---YKGILPDGTVVAVKRAQEGSLQGE-KEFLTEIQFLSRLHHRN 666
+ + + IG+G YG V Y + + VA+K+ Q + L EI+ L R H N
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 86
Query: 667 LVSLVGYCD----EEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILY 722
++ + E+ + + + + + L L + L L RG+ Y
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYFLYQIL---RGLKY 143
Query: 723 LHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA-PVPDIEGIVPAHVSTVVKGTP 781
+H+ V HRD+K SN+LL+ K+ DFGL+R+A P D G + +V+ T
Sbjct: 144 IHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA-----TR 195
Query: 782 GYLDPEYFLTHKLTDKS-DVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVI 840
Y PE L K KS D++S+G + E+L+ +PI GK+ + ++N I
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLN----------HI 244
Query: 841 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN-MMPESDTKTPEFIN 899
G +GS E + I L AR + + + + WN + P +D+K + ++
Sbjct: 245 LGILGSPSQEDLNCIINLK---------ARNYLLSLPHKNKVPWNRLFPNADSKALDLLD 295
Query: 900 XXXXXXXXXXXXXXXMLKHPYVSS 923
L HPY+
Sbjct: 296 KMLTFNPHKRIEVEQALAHPYLEQ 319
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 89/202 (44%), Gaps = 14/202 (6%)
Query: 616 QIGQGGYGKV-YKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYC 674
+IG+G G V + G +VAVK+ Q + E+ + H N+V +
Sbjct: 158 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 217
Query: 675 DEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHR 734
E +V EF+ G L D ++ A ++ L + + LH + V HR
Sbjct: 218 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA---AVCLAVLQALSVLHAQG---VIHR 271
Query: 735 DIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKL 794
DIK+ +ILL H K++DFG + VP V GTP ++ PE
Sbjct: 272 DIKSDSILLTHDGRVKLSDFGF-----CAQVSKEVPRRKXLV--GTPYWMAPELISRLPY 324
Query: 795 TDKSDVYSLGVVFLELLTGMQP 816
+ D++SLG++ +E++ G P
Sbjct: 325 GPEVDIWSLGIMVIEMVDGEPP 346
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 91/207 (43%), Gaps = 14/207 (6%)
Query: 611 FNSSTQIGQGGYGKV-YKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVS 669
++ +IG+G G V + G +VAVK+ Q + E+ + H N+V
Sbjct: 26 LDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVE 85
Query: 670 LVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADP 729
+ E +V EF+ G L D ++ A ++ L + + LH +
Sbjct: 86 MYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA---AVCLAVLQALSVLHAQG-- 140
Query: 730 PVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYF 789
V HRDIK+ +ILL H K++DFG + VP V GTP ++ PE
Sbjct: 141 -VIHRDIKSDSILLTHDGRVKLSDFGFC-----AQVSKEVPRRKXLV--GTPYWMAPELI 192
Query: 790 LTHKLTDKSDVYSLGVVFLELLTGMQP 816
+ D++SLG++ +E++ G P
Sbjct: 193 SRLPYGPEVDIWSLGIMVIEMVDGEPP 219
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 135/321 (42%), Gaps = 38/321 (11%)
Query: 611 FNSSTQIGQGGYGKV---YKGILPDGTVVAVKRAQEGSLQGE-KEFLTEIQFLSRLHHRN 666
+ + + IG+G YG V Y + + VA+K+ Q + L EI+ L R H N
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 87
Query: 667 LVSLVGYCDEEG-EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHT 725
++ + EQM + + D + L RG+ Y+H+
Sbjct: 88 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 147
Query: 726 EADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA-PVPDIEGIVPAHVSTVVKGTPGYL 784
V HRD+K SN+LL+ K+ DFGL+R+A P D G + +V+ T Y
Sbjct: 148 AN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA-----TRWYR 199
Query: 785 DPEYFLTHKLTDKS-DVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 843
PE L K KS D++S+G + E+L+ +PI GK+ + ++N I G
Sbjct: 200 APEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLN----------HILGI 248
Query: 844 MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN-MMPESDTKTPEFINXXX 902
+GS E + I L AR + + + + WN + P +D+K + ++
Sbjct: 249 LGSPSQEDLNCIINLK---------ARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKML 299
Query: 903 XXXXXXXXXXXXMLKHPYVSS 923
L HPY+
Sbjct: 300 TFNPHKRIEVEQALAHPYLEQ 320
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 135/321 (42%), Gaps = 38/321 (11%)
Query: 611 FNSSTQIGQGGYGKV---YKGILPDGTVVAVKRAQEGSLQGE-KEFLTEIQFLSRLHHRN 666
+ + + IG+G YG V Y + + VA+K+ Q + L EI+ L R H N
Sbjct: 31 YTNLSYIGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 88
Query: 667 LVSLVGYCDEEG-EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHT 725
++ + EQM + + D + L RG+ Y+H+
Sbjct: 89 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 148
Query: 726 EADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA-PVPDIEGIVPAHVSTVVKGTPGYL 784
V HRD+K SN+LL+ K+ DFGL+R+A P D G + +V+ T Y
Sbjct: 149 AN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA-----TRWYR 200
Query: 785 DPEYFLTHKLTDKS-DVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 843
PE L K KS D++S+G + E+L+ +PI GK+ + ++N I G
Sbjct: 201 APEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLN----------HILGI 249
Query: 844 MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN-MMPESDTKTPEFINXXX 902
+GS E + I L AR + + + + WN + P +D+K + ++
Sbjct: 250 LGSPSQEDLNCIINLK---------ARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKML 300
Query: 903 XXXXXXXXXXXXMLKHPYVSS 923
L HPY+
Sbjct: 301 TFNPHKRIEVEQALAHPYLEQ 321
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 135/321 (42%), Gaps = 38/321 (11%)
Query: 611 FNSSTQIGQGGYGKV---YKGILPDGTVVAVKRAQEGSLQGE-KEFLTEIQFLSRLHHRN 666
+ + + IG+G YG V Y + + VA+K+ Q + L EI+ L R H N
Sbjct: 22 YTNLSYIGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 79
Query: 667 LVSLVGYCDEEG-EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHT 725
++ + EQM + + D + L RG+ Y+H+
Sbjct: 80 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 139
Query: 726 EADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA-PVPDIEGIVPAHVSTVVKGTPGYL 784
V HRD+K SN+LL+ K+ DFGL+R+A P D G + +V+ T Y
Sbjct: 140 AN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA-----TRWYR 191
Query: 785 DPEYFLTHKLTDKS-DVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 843
PE L K KS D++S+G + E+L+ +PI GK+ + ++N I G
Sbjct: 192 APEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLN----------HILGI 240
Query: 844 MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN-MMPESDTKTPEFINXXX 902
+GS E + I L AR + + + + WN + P +D+K + ++
Sbjct: 241 LGSPSQEDLNCIINLK---------ARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKML 291
Query: 903 XXXXXXXXXXXXMLKHPYVSS 923
L HPY+
Sbjct: 292 TFNPHKRIEVEQALAHPYLEQ 312
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 135/321 (42%), Gaps = 38/321 (11%)
Query: 611 FNSSTQIGQGGYGKV---YKGILPDGTVVAVKRAQEGSLQGE-KEFLTEIQFLSRLHHRN 666
+ + + IG+G YG V Y + + VA+K+ Q + L EI+ L R H N
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 86
Query: 667 LVSLVGYCDEEG-EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHT 725
++ + EQM + + D + L RG+ Y+H+
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 146
Query: 726 EADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA-PVPDIEGIVPAHVSTVVKGTPGYL 784
V HRD+K SN+LL+ K+ DFGL+R+A P D G + +V+ T Y
Sbjct: 147 AN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA-----TRWYR 198
Query: 785 DPEYFLTHKLTDKS-DVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 843
PE L K KS D++S+G + E+L+ +PI GK+ + ++N I G
Sbjct: 199 APEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLN----------HILGI 247
Query: 844 MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN-MMPESDTKTPEFINXXX 902
+GS E + I L AR + + + + WN + P +D+K + ++
Sbjct: 248 LGSPSQEDLNCIINLK---------ARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKML 298
Query: 903 XXXXXXXXXXXXMLKHPYVSS 923
L HPY+
Sbjct: 299 TFNPHKRIEVEQALAHPYLEQ 319
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 135/321 (42%), Gaps = 38/321 (11%)
Query: 611 FNSSTQIGQGGYGKV---YKGILPDGTVVAVKRAQEGSLQGE-KEFLTEIQFLSRLHHRN 666
+ + + IG+G YG V Y + + VA+K+ Q + L EI+ L R H N
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 80
Query: 667 LVSLVGYCDEEG-EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHT 725
++ + EQM + + D + L RG+ Y+H+
Sbjct: 81 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 140
Query: 726 EADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA-PVPDIEGIVPAHVSTVVKGTPGYL 784
V HRD+K SN+LL+ K+ DFGL+R+A P D G + +V+ T Y
Sbjct: 141 AN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA-----TRWYR 192
Query: 785 DPEYFLTHKLTDKS-DVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 843
PE L K KS D++S+G + E+L+ +PI GK+ + ++N I G
Sbjct: 193 APEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLN----------HILGI 241
Query: 844 MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN-MMPESDTKTPEFINXXX 902
+GS E + I L AR + + + + WN + P +D+K + ++
Sbjct: 242 LGSPSQEDLNCIINLK---------ARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKML 292
Query: 903 XXXXXXXXXXXXMLKHPYVSS 923
L HPY+
Sbjct: 293 TFNPHKRIEVEQALAHPYLEQ 313
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 70.5 bits (171), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 91/207 (43%), Gaps = 14/207 (6%)
Query: 611 FNSSTQIGQGGYGKV-YKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVS 669
++ +IG+G G V + G +VAVK+ Q + E+ + H N+V
Sbjct: 22 LDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVE 81
Query: 670 LVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADP 729
+ E +V EF+ G L D ++ A ++ L + + LH +
Sbjct: 82 MYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA---AVCLAVLQALSVLHAQG-- 136
Query: 730 PVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYF 789
V HRDIK+ +ILL H K++DFG + VP V GTP ++ PE
Sbjct: 137 -VIHRDIKSDSILLTHDGRVKLSDFGFC-----AQVSKEVPRRKXLV--GTPYWMAPELI 188
Query: 790 LTHKLTDKSDVYSLGVVFLELLTGMQP 816
+ D++SLG++ +E++ G P
Sbjct: 189 SRLPYGPEVDIWSLGIMVIEMVDGEPP 215
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 70.5 bits (171), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 112/223 (50%), Gaps = 25/223 (11%)
Query: 609 NNFNSSTQIGQGGYGKVY---KGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQ--FLSRL 662
++F +GQG +GKV+ K PD G + A+K ++ +L+ T+++ L+ +
Sbjct: 28 SHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADV 87
Query: 663 HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAK---SKEPLGFAMRLSIALGSSRG 719
+H +V L EG+ L+ +F+ G L +LS + ++E + F + +ALG
Sbjct: 88 NHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYL-AELALG---- 142
Query: 720 ILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKG 779
+ +LH+ + +RD+K NILLD + K+ DFGLS+ E I + G
Sbjct: 143 LDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSK-------EAIDHEKKAYSFCG 192
Query: 780 TPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKN 822
T Y+ PE + +D +S GV+ E+LTG P GK+
Sbjct: 193 TVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQ-GKD 234
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 70.5 bits (171), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 135/321 (42%), Gaps = 38/321 (11%)
Query: 611 FNSSTQIGQGGYGKV---YKGILPDGTVVAVKRAQEGSLQGE-KEFLTEIQFLSRLHHRN 666
+ + + IG+G YG V Y + + VA+K+ Q + L EI+ L R H N
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 102
Query: 667 LVSLVGYCDEEG-EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHT 725
++ + EQM + + D + L RG+ Y+H+
Sbjct: 103 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 162
Query: 726 EADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA-PVPDIEGIVPAHVSTVVKGTPGYL 784
V HRD+K SN+LL+ K+ DFGL+R+A P D G + +V+ T Y
Sbjct: 163 AN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA-----TRWYR 214
Query: 785 DPEYFLTHKLTDKS-DVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 843
PE L K KS D++S+G + E+L+ +PI GK+ + ++N I G
Sbjct: 215 APEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLN----------HILGI 263
Query: 844 MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN-MMPESDTKTPEFINXXX 902
+GS E + I L AR + + + + WN + P +D+K + ++
Sbjct: 264 LGSPSQEDLNCIINLK---------ARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKML 314
Query: 903 XXXXXXXXXXXXMLKHPYVSS 923
L HPY+
Sbjct: 315 TFNPHKRIEVEQALAHPYLEQ 335
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 70.5 bits (171), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 135/321 (42%), Gaps = 38/321 (11%)
Query: 611 FNSSTQIGQGGYGKV---YKGILPDGTVVAVKRAQEGSLQGE-KEFLTEIQFLSRLHHRN 666
+ + + IG+G YG V Y + + VA+K+ Q + L EI+ L R H N
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 86
Query: 667 LVSLVGYCDEEG-EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHT 725
++ + EQM + + D + L RG+ Y+H+
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 146
Query: 726 EADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA-PVPDIEGIVPAHVSTVVKGTPGYL 784
V HRD+K SN+LL+ K+ DFGL+R+A P D G + +V+ T Y
Sbjct: 147 AN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA-----TRWYR 198
Query: 785 DPEYFLTHKLTDKS-DVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 843
PE L K KS D++S+G + E+L+ +PI GK+ + ++N I G
Sbjct: 199 APEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLN----------HILGI 247
Query: 844 MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN-MMPESDTKTPEFINXXX 902
+GS E + I L AR + + + + WN + P +D+K + ++
Sbjct: 248 LGSPSQEDLNCIINLK---------ARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKML 298
Query: 903 XXXXXXXXXXXXMLKHPYVSS 923
L HPY+
Sbjct: 299 TFNPHKRIEVEQALAHPYLEQ 319
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 135/321 (42%), Gaps = 38/321 (11%)
Query: 611 FNSSTQIGQGGYGKV---YKGILPDGTVVAVKRAQEGSLQGE-KEFLTEIQFLSRLHHRN 666
+ + + IG+G YG V Y + + VA+K+ Q + L EI+ L R H N
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 80
Query: 667 LVSLVGYCDEEG-EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHT 725
++ + EQM + + D + L RG+ Y+H+
Sbjct: 81 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 140
Query: 726 EADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA-PVPDIEGIVPAHVSTVVKGTPGYL 784
V HRD+K SN+LL+ K+ DFGL+R+A P D G + +V+ T Y
Sbjct: 141 AN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA-----TRWYR 192
Query: 785 DPEYFLTHKLTDKS-DVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 843
PE L K KS D++S+G + E+L+ +PI GK+ + ++N I G
Sbjct: 193 APEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLN----------HILGI 241
Query: 844 MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN-MMPESDTKTPEFINXXX 902
+GS E + I L AR + + + + WN + P +D+K + ++
Sbjct: 242 LGSPEQEDLNCIINLK---------ARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKML 292
Query: 903 XXXXXXXXXXXXMLKHPYVSS 923
L HPY+
Sbjct: 293 TFNPHKRIEVEQALAHPYLEQ 313
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 92/219 (42%), Gaps = 17/219 (7%)
Query: 605 ALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQ-----FL 659
+L +F+ IG+G Y KV L + + + L + E + +Q F
Sbjct: 1 SLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFE 60
Query: 660 SRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRG 719
+H LV L E V E+++ G L + + K P A S + S
Sbjct: 61 QASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEI--SLA 118
Query: 720 ILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKG 779
+ YLH + +RD+K N+LLD + K+ D+G+ + EG+ P ++ G
Sbjct: 119 LNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCK-------EGLRPGDTTSXFCG 168
Query: 780 TPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPIS 818
TP Y+ PE D ++LGV+ E++ G P
Sbjct: 169 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 207
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 92/218 (42%), Gaps = 17/218 (7%)
Query: 605 ALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQ-----FL 659
+L +F+ IG+G Y KV L + + + L + E + +Q F
Sbjct: 16 SLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFE 75
Query: 660 SRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRG 719
+H LV L E V E+++ G L + + K P A S + S
Sbjct: 76 QASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEI--SLA 133
Query: 720 ILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKG 779
+ YLH + +RD+K N+LLD + K+ D+G+ + EG+ P ++ G
Sbjct: 134 LNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCK-------EGLRPGDTTSXFCG 183
Query: 780 TPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPI 817
TP Y+ PE D ++LGV+ E++ G P
Sbjct: 184 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 221
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 121/287 (42%), Gaps = 40/287 (13%)
Query: 617 IGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQG--EKEFLTEIQFLSRLHHRNLVSLVGY 673
+G+G YG V K D G +VA+K+ E +K + EI+ L +L H NLV+L+
Sbjct: 33 VGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEV 92
Query: 674 CDEEGEQMLVYEFMSNGTLRD-QLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVF 732
C ++ LV+EF+ + L D +L L + + GI + H+ +
Sbjct: 93 CKKKKRWYLVFEFVDHTILDDLELFPNG---LDYQVVQKYLFQIINGIGFCHSHN---II 146
Query: 733 HRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH 792
HRDIK NIL+ K+ DFG +R P V T Y PE +
Sbjct: 147 HRDIKPENILVSQSGVVKLCDFGFARTLA-------APGEVYDDEVATRWYRAPELLVGD 199
Query: 793 -KLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREV--------NIAYQSSMMFSVIDGN 843
K DV+++G + E+ G +P+ G + + ++ N+ + +F+
Sbjct: 200 VKYGKAVDVWAIGCLVTEMFMG-EPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVF 258
Query: 844 MGSYPSECVEK-------------FIKLALKCCQDETDARPSMSEVM 877
G E E+ I LA KC + D RP +E++
Sbjct: 259 AGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELL 305
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 104/222 (46%), Gaps = 22/222 (9%)
Query: 609 NNFNSSTQIGQGGYGKVYKGILPDG-TVVAVKRAQEGSLQGEKE-----FLTEIQFLSRL 662
+ +IG+G YG V+K + +VA+KR + L + E L EI L L
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVR---LDDDDEGVPSSALREICLLKEL 58
Query: 663 HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILY 722
H+N+V L + + LV+EF + L+ + + + L + S +G+ +
Sbjct: 59 KHKNIVRLHDVLHSDKKLTLVFEF-CDQDLKKYFDSCNGD-LDPEIVKSFLFQLLKGLGF 116
Query: 723 LHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPG 782
H+ V HRD+K N+L++ K+ADFGL+R +P V + + VV T
Sbjct: 117 CHSRN---VLHRDLKPQNLLINRNGELKLADFGLARAFGIP-----VRCYSAEVV--TLW 166
Query: 783 YLDPEYFLTHKLTDKS-DVYSLGVVFLELLTGMQPISHGKNI 823
Y P+ KL S D++S G +F EL +P+ G ++
Sbjct: 167 YRPPDVLFGAKLYSTSIDMWSAGCIFAELANAARPLFPGNDV 208
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 91/218 (41%), Gaps = 17/218 (7%)
Query: 606 LATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQ-----FLS 660
L +F+ IG+G Y KV L + + + L + E + +Q F
Sbjct: 6 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQ 65
Query: 661 RLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGI 720
+H LV L E V E+++ G L + + K P A S + S +
Sbjct: 66 ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEI--SLAL 123
Query: 721 LYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGT 780
YLH + +RD+K N+LLD + K+ D+G+ + EG+ P ++ GT
Sbjct: 124 NYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCK-------EGLRPGDTTSXFCGT 173
Query: 781 PGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPIS 818
P Y+ PE D ++LGV+ E++ G P
Sbjct: 174 PNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 211
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 108/243 (44%), Gaps = 31/243 (12%)
Query: 586 SSKTSIKIDGVRSFTYGEMALATNNFNSSTQIGQGGYGKVY----KGILPDGTVVAVKRA 641
S + ++ G F A+ ++ + +G+G +G+V K + V + +
Sbjct: 9 SGRENLYFQGPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKR 68
Query: 642 QEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSK 701
Q ++ L E+Q L +L H N++ L + +++G LV E + G L D++ ++ +
Sbjct: 69 QVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR 128
Query: 702 EPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHK---FTAKVADFGLSR 758
A R+ + S GI Y+H + HRD+K N+LL+ K ++ DFGLS
Sbjct: 129 FSEVDAARIIRQVLS--GITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLS- 182
Query: 759 LAPVPDIEGIVPAHVSTVVK-----GTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTG 813
H K GT Y+ PE L +K DV+S GV+ LL+G
Sbjct: 183 ------------THFEASKKMKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 229
Query: 814 MQP 816
P
Sbjct: 230 CPP 232
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 115/287 (40%), Gaps = 45/287 (15%)
Query: 100 PEIGRLSYLTILDFMWNKISGSIPKEIGNIKXXXXXXXXXXXXXXXXPEELGYLPKLDRI 159
P + S L L +N +SG+IP +G++ P+EL Y+ L+ +
Sbjct: 409 PTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETL 468
Query: 160 QIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYXX 219
+D N ++G +P +N ++NN ++G+IP + RL +L + L NN+ +G
Sbjct: 469 ILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIP 528
Query: 220 XXXXXXXXXXXXXXDNNNFEGTTIPASYSNMSKLLKLSL---------------RNCSLQ 264
+ N F G TIPA+ S + + + C
Sbjct: 529 AELGDCRSLIWLDLNTNLFNG-TIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGA 587
Query: 265 GPMPDLS--RIPNLGYLLS---LNITT-------------------IKLSNNKLTGTIPS 300
G + + R L L + NIT+ + +S N L+G IP
Sbjct: 588 GNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPK 647
Query: 301 NFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNL 347
+P L L + +N +SGSIP + R LN ILD +N L
Sbjct: 648 EIGSMPYLFILNLGHNDISGSIPDEVGDLRGLN-----ILDLSSNKL 689
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 86/183 (46%), Gaps = 34/183 (18%)
Query: 147 PEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVH 206
P L +L + + NY+SG++P S +L+K R + N + G+IP EL + +L
Sbjct: 408 PPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLET 467
Query: 207 MLLDNNNLTGYXXXXXXXXXXXXXXXXDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGP 266
++LD N+LTG IP+ SN + L +SL N L G
Sbjct: 468 LILDFNDLTG-------------------------EIPSGLSNCTNLNWISLSNNRLTGE 502
Query: 267 MPD-LSRIPNLGYLLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSS 325
+P + R+ NL L KLSNN +G IP+ L L + N +G+IP++
Sbjct: 503 IPKWIGRLENLAIL--------KLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAA 554
Query: 326 IWQ 328
+++
Sbjct: 555 MFK 557
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 57/120 (47%), Gaps = 2/120 (1%)
Query: 99 SPEIGRLSYLTILDFMWNKISGSIPKEIGNIKXXXXXXXXXXXXXXXXPEELGYLPKLDR 158
SP + LD +N +SG IPKEIG++ P+E+G L L+
Sbjct: 622 SPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNI 681
Query: 159 IQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSL-VHMLLDNNNLTGY 217
+ + N + G +P++ + L ++NN++SG I PE+ + + L+N L GY
Sbjct: 682 LDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPI-PEMGQFETFPPAKFLNNPGLCGY 740
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 88/224 (39%), Gaps = 14/224 (6%)
Query: 102 IGRLSYLTILDFMWNKISGSIPKEIGNIKXXXXXXXXXXXXXXXXPEELGYLPKLDRIQI 161
IGRL L IL N SG+IP E+G+ + P + +I
Sbjct: 507 IGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFK----QSGKI 562
Query: 162 DQNYISGSLPKSFANLNKTRHFHMNNN--SISGQIPPELSRLPSLVHMLLDNNNLTGYXX 219
N+I+G N + H N G +L+RL + + + G+
Sbjct: 563 AANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTS 622
Query: 220 XXXXXXXXXXXXXXDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYL 279
N G IP +M L L+L + + G +PD +G L
Sbjct: 623 PTFDNNGSMMFLDMSYNMLSGY-IPKEIGSMPYLFILNLGHNDISGSIPD-----EVGDL 676
Query: 280 LSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIP 323
LNI + LS+NKL G IP S L L + ++NN+LSG IP
Sbjct: 677 RGLNI--LDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIP 718
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 89/230 (38%), Gaps = 11/230 (4%)
Query: 100 PEIGRLSYLTILDFMWNKISGSIPKEIGNIKXXXXXXXXXXXXXXXXPEELGYLPKLDRI 159
P +G S L LD NK+SG + I P L L +
Sbjct: 214 PFLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYL 271
Query: 160 QIDQNYISGSLPKSFANLNKT-RHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTG-Y 217
+ +N +G +P + T ++ N G +PP L + L +NN +G
Sbjct: 272 SLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGEL 331
Query: 218 XXXXXXXXXXXXXXXXDNNNFEGTTIPASYSNMSK-LLKLSLRNCSLQGPMPDLSRIPNL 276
N F G +P S +N+S LL L L + + GP+ +PNL
Sbjct: 332 PMDTLLKMRGLKVLDLSFNEFSGE-LPESLTNLSASLLTLDLSSNNFSGPI-----LPNL 385
Query: 277 GYLLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSI 326
+ + L NN TG IP S L L ++ N LSG+IPSS+
Sbjct: 386 CQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSL 435
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 55/126 (43%), Gaps = 1/126 (0%)
Query: 148 EELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHM 207
E+L L + I G +F N M+ N +SG IP E+ +P L +
Sbjct: 599 EQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFIL 658
Query: 208 LLDNNNLTGYXXXXXXXXXXXXXXXXDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPM 267
L +N+++G +N +G IP + S ++ L ++ L N +L GP+
Sbjct: 659 NLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGR-IPQAMSALTMLTEIDLSNNNLSGPI 717
Query: 268 PDLSRI 273
P++ +
Sbjct: 718 PEMGQF 723
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 100/261 (38%), Gaps = 37/261 (14%)
Query: 110 ILDFMWNKISGSIPKEIGNIKXXXXXXXXXXXXXXXXPEELGYLPKLDRIQIDQNYISGS 169
ILDF N ++G IP + N P+ +G L L +++ N SG+
Sbjct: 469 ILDF--NDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGN 526
Query: 170 LPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLV---------HMLLDNNNL------ 214
+P + +N N +G IP + + + ++ + N+ +
Sbjct: 527 IPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHG 586
Query: 215 -------TGYXXXXXXXXXXXXXXXXDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPM 267
G + + G T P ++ N ++ L + L G +
Sbjct: 587 AGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSP-TFDNNGSMMFLDMSYNMLSGYI 645
Query: 268 PDLSRIPNLGYLLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIW 327
P I ++ YL LN L +N ++G+IP L L L +++N L G IP ++
Sbjct: 646 P--KEIGSMPYLFILN-----LGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMS 698
Query: 328 QSRTLNATETFILDFQNNNLT 348
L TE +D NNNL+
Sbjct: 699 ALTML--TE---IDLSNNNLS 714
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 132/305 (43%), Gaps = 56/305 (18%)
Query: 616 QIGQGGYGKVYKGILPDGTVVAVK---RAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVG 672
QIG+G YG+V+ G G VAVK +E S E TEI + H N++ +
Sbjct: 44 QIGKGRYGEVWMGKW-RGEKVAVKVFFTTEEASWFRE----TEIYQTVLMRHENILGFIA 98
Query: 673 YCDEEG-----EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTE- 726
D +G + L+ ++ NG+L D L + + L L +A S G+ +LHTE
Sbjct: 99 -ADIKGTGSWTQLYLITDYHENGSLYDYLKSTT---LDAKSMLKLAYSSVSGLCHLHTEI 154
Query: 727 ----ADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPG 782
P + HRD+K+ NIL+ T +AD GL+ E +P + GT
Sbjct: 155 FSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRV---GTKR 211
Query: 783 YLDPE---------YFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNI---- 829
Y+ PE +F ++ + +D+YS G++ E+ + +S G IV E +
Sbjct: 212 YMPPEVLDESLNRNHFQSYIM---ADMYSFGLILWEV--ARRCVSGG--IVEEYQLPYHD 264
Query: 830 ------AYQSSMMFSVIDGNMGSYPS-----ECVEKFIKLALKCCQDETDARPSMSEVMR 878
+Y+ I S+P+ EC+ + KL +C +R + V +
Sbjct: 265 LVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKK 324
Query: 879 ELESI 883
L +
Sbjct: 325 TLAKM 329
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 97/221 (43%), Gaps = 24/221 (10%)
Query: 610 NFNSSTQIGQGGYGKVY--KGILPDGTVVAVKRAQEGSLQGE--KEFLTEIQFLSRLHHR 665
N+ IG+G + KV + IL G VAVK + L ++ E++ L+H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHP 73
Query: 666 NLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSA--KSKEPLGFAMRLSIALGSSRGILYL 723
N+V L + E LV E+ S G + D L A + KE A I + Y
Sbjct: 74 NIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIV----SAVQYC 129
Query: 724 HTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGY 783
H + + HRD+KA N+LLD K+ADFG S + G P Y
Sbjct: 130 HQKF---IVHRDLKAENLLLDADXNIKIADFGFS--------NEFTFGNKLDAFCGAPPY 178
Query: 784 LDPEYFLTHKLTD-KSDVYSLGVVFLELLTGMQPISHGKNI 823
PE F K + DV+SLGV+ L++G P G+N+
Sbjct: 179 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD-GQNL 218
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 69.7 bits (169), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 94/221 (42%), Gaps = 26/221 (11%)
Query: 605 ALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFL-----TEIQF 658
++AT+ + +IG G YG VYK P G VA+K + + G L E+
Sbjct: 5 SMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVAL 64
Query: 659 LSRLH---HRNLVSLVGYC-----DEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRL 710
L RL H N+V L+ C D E + LV+E + LR L L
Sbjct: 65 LRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIK 123
Query: 711 SIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVP 770
+ RG+ +LH + HRD+K NIL+ T K+ADFGL+R+
Sbjct: 124 DLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSY-------- 172
Query: 771 AHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELL 811
T V T Y PE L D++S+G +F E+
Sbjct: 173 QMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 213
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 69.7 bits (169), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 135/321 (42%), Gaps = 38/321 (11%)
Query: 611 FNSSTQIGQGGYGKV---YKGILPDGTVVAVKRAQEGSLQGE-KEFLTEIQFLSRLHHRN 666
+ + + IG+G YG V Y + + VA+++ Q + L EI+ L R H N
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNL--NKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHEN 86
Query: 667 LVSLVGYCDEEG-EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHT 725
++ + EQM + + D + L RG+ Y+H+
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 146
Query: 726 EADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA-PVPDIEGIVPAHVSTVVKGTPGYL 784
V HRD+K SN+LL+ K+ DFGL+R+A P D G + +V+ T Y
Sbjct: 147 AN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA-----TRWYR 198
Query: 785 DPEYFLTHKLTDKS-DVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 843
PE L K KS D++S+G + E+L+ +PI GK+ + ++N I G
Sbjct: 199 APEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLN----------HILGI 247
Query: 844 MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN-MMPESDTKTPEFINXXX 902
+GS E + I L AR + + + + WN + P +D+K + ++
Sbjct: 248 LGSPSQEDLNCIINLK---------ARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKML 298
Query: 903 XXXXXXXXXXXXMLKHPYVSS 923
L HPY+
Sbjct: 299 TFNPHKRIEVEQALAHPYLEQ 319
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 69.7 bits (169), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 115/287 (40%), Gaps = 45/287 (15%)
Query: 100 PEIGRLSYLTILDFMWNKISGSIPKEIGNIKXXXXXXXXXXXXXXXXPEELGYLPKLDRI 159
P + S L L +N +SG+IP +G++ P+EL Y+ L+ +
Sbjct: 412 PTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETL 471
Query: 160 QIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYXX 219
+D N ++G +P +N ++NN ++G+IP + RL +L + L NN+ +G
Sbjct: 472 ILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIP 531
Query: 220 XXXXXXXXXXXXXXDNNNFEGTTIPASYSNMSKLLKLSL---------------RNCSLQ 264
+ N F G TIPA+ S + + + C
Sbjct: 532 AELGDCRSLIWLDLNTNLFNG-TIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGA 590
Query: 265 GPMPDLS--RIPNLGYLLS---LNITT-------------------IKLSNNKLTGTIPS 300
G + + R L L + NIT+ + +S N L+G IP
Sbjct: 591 GNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPK 650
Query: 301 NFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNL 347
+P L L + +N +SGSIP + R LN ILD +N L
Sbjct: 651 EIGSMPYLFILNLGHNDISGSIPDEVGDLRGLN-----ILDLSSNKL 692
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 86/183 (46%), Gaps = 34/183 (18%)
Query: 147 PEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVH 206
P L +L + + NY+SG++P S +L+K R + N + G+IP EL + +L
Sbjct: 411 PPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLET 470
Query: 207 MLLDNNNLTGYXXXXXXXXXXXXXXXXDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGP 266
++LD N+LTG IP+ SN + L +SL N L G
Sbjct: 471 LILDFNDLTG-------------------------EIPSGLSNCTNLNWISLSNNRLTGE 505
Query: 267 MPD-LSRIPNLGYLLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSS 325
+P + R+ NL L KLSNN +G IP+ L L + N +G+IP++
Sbjct: 506 IPKWIGRLENLAIL--------KLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAA 557
Query: 326 IWQ 328
+++
Sbjct: 558 MFK 560
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 57/120 (47%), Gaps = 2/120 (1%)
Query: 99 SPEIGRLSYLTILDFMWNKISGSIPKEIGNIKXXXXXXXXXXXXXXXXPEELGYLPKLDR 158
SP + LD +N +SG IPKEIG++ P+E+G L L+
Sbjct: 625 SPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNI 684
Query: 159 IQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSL-VHMLLDNNNLTGY 217
+ + N + G +P++ + L ++NN++SG I PE+ + + L+N L GY
Sbjct: 685 LDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPI-PEMGQFETFPPAKFLNNPGLCGY 743
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 88/224 (39%), Gaps = 14/224 (6%)
Query: 102 IGRLSYLTILDFMWNKISGSIPKEIGNIKXXXXXXXXXXXXXXXXPEELGYLPKLDRIQI 161
IGRL L IL N SG+IP E+G+ + P + +I
Sbjct: 510 IGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFK----QSGKI 565
Query: 162 DQNYISGSLPKSFANLNKTRHFHMNNN--SISGQIPPELSRLPSLVHMLLDNNNLTGYXX 219
N+I+G N + H N G +L+RL + + + G+
Sbjct: 566 AANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTS 625
Query: 220 XXXXXXXXXXXXXXDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYL 279
N G IP +M L L+L + + G +PD +G L
Sbjct: 626 PTFDNNGSMMFLDMSYNMLSGY-IPKEIGSMPYLFILNLGHNDISGSIPD-----EVGDL 679
Query: 280 LSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIP 323
LNI + LS+NKL G IP S L L + ++NN+LSG IP
Sbjct: 680 RGLNI--LDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIP 721
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 89/230 (38%), Gaps = 11/230 (4%)
Query: 100 PEIGRLSYLTILDFMWNKISGSIPKEIGNIKXXXXXXXXXXXXXXXXPEELGYLPKLDRI 159
P +G S L LD NK+SG + I P L L +
Sbjct: 217 PFLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYL 274
Query: 160 QIDQNYISGSLPKSFANLNKT-RHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTG-Y 217
+ +N +G +P + T ++ N G +PP L + L +NN +G
Sbjct: 275 SLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGEL 334
Query: 218 XXXXXXXXXXXXXXXXDNNNFEGTTIPASYSNMSK-LLKLSLRNCSLQGPMPDLSRIPNL 276
N F G +P S +N+S LL L L + + GP+ +PNL
Sbjct: 335 PMDTLLKMRGLKVLDLSFNEFSGE-LPESLTNLSASLLTLDLSSNNFSGPI-----LPNL 388
Query: 277 GYLLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSI 326
+ + L NN TG IP S L L ++ N LSG+IPSS+
Sbjct: 389 CQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSL 438
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 55/126 (43%), Gaps = 1/126 (0%)
Query: 148 EELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHM 207
E+L L + I G +F N M+ N +SG IP E+ +P L +
Sbjct: 602 EQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFIL 661
Query: 208 LLDNNNLTGYXXXXXXXXXXXXXXXXDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPM 267
L +N+++G +N +G IP + S ++ L ++ L N +L GP+
Sbjct: 662 NLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGR-IPQAMSALTMLTEIDLSNNNLSGPI 720
Query: 268 PDLSRI 273
P++ +
Sbjct: 721 PEMGQF 726
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 100/261 (38%), Gaps = 37/261 (14%)
Query: 110 ILDFMWNKISGSIPKEIGNIKXXXXXXXXXXXXXXXXPEELGYLPKLDRIQIDQNYISGS 169
ILDF N ++G IP + N P+ +G L L +++ N SG+
Sbjct: 472 ILDF--NDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGN 529
Query: 170 LPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLV---------HMLLDNNNL------ 214
+P + +N N +G IP + + + ++ + N+ +
Sbjct: 530 IPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHG 589
Query: 215 -------TGYXXXXXXXXXXXXXXXXDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPM 267
G + + G T P ++ N ++ L + L G +
Sbjct: 590 AGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSP-TFDNNGSMMFLDMSYNMLSGYI 648
Query: 268 PDLSRIPNLGYLLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIW 327
P I ++ YL LN L +N ++G+IP L L L +++N L G IP ++
Sbjct: 649 P--KEIGSMPYLFILN-----LGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMS 701
Query: 328 QSRTLNATETFILDFQNNNLT 348
L TE +D NNNL+
Sbjct: 702 ALTML--TE---IDLSNNNLS 717
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 69.3 bits (168), Expect = 9e-12, Method: Composition-based stats.
Identities = 60/203 (29%), Positives = 94/203 (46%), Gaps = 13/203 (6%)
Query: 617 IGQGGYGKVYKGI-LPDGTVVAVKRAQ-EGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYC 674
+G+G YG+V + VAVK + ++ + EI L+H N+V G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 74
Query: 675 DEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHR 734
E Q L E+ S G L D++ P A R L + G++YLH + HR
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHGIG---ITHR 129
Query: 735 DIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKL 794
DIK N+LLD + K++DFGL+ + + E ++ + GT Y+ PE +
Sbjct: 130 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLL-----NKMXGTLPYVAPELLKRREF 184
Query: 795 -TDKSDVYSLGVVFLELLTGMQP 816
+ DV+S G+V +L G P
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELP 207
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 88/202 (43%), Gaps = 14/202 (6%)
Query: 616 QIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYC 674
+IG+G G V G VAVK+ Q + E+ + HH N+V +
Sbjct: 52 KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSY 111
Query: 675 DEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHR 734
E +V EF+ G L D ++ A ++ L R + YLH + V HR
Sbjct: 112 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA---TVCLSVLRALSYLHNQG---VIHR 165
Query: 735 DIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKL 794
DIK+ +ILL K++DFG + VP V GTP ++ PE
Sbjct: 166 DIKSDSILLTSDGRIKLSDFGFC-----AQVSKEVPKRKXLV--GTPYWMAPEVISRLPY 218
Query: 795 TDKSDVYSLGVVFLELLTGMQP 816
+ D++SLG++ +E++ G P
Sbjct: 219 GTEVDIWSLGIMVIEMIDGEPP 240
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 136/318 (42%), Gaps = 44/318 (13%)
Query: 617 IGQGGYGKV---YKGILPDGTVVAVKRAQEGSLQGE-KEFLTEIQFLSRLHHRNLVS--- 669
IG+G YG V Y + T VA+K+ Q + L EIQ L R H N++
Sbjct: 51 IGEGAYGMVSSAYDHV--RKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVIGIRD 108
Query: 670 -LVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEAD 728
L E + + + + L L ++ L L RG+ Y+H+
Sbjct: 109 ILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFLYQIL---RGLKYIHSAN- 164
Query: 729 PPVFHRDIKASNILLDHKFTAKVADFGLSRLA-PVPDIEGIVPAHVSTVVKGTPGYLDPE 787
V HRD+K SN+L++ K+ DFGL+R+A P D G + V+T Y PE
Sbjct: 165 --VLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATR-----WYRAPE 217
Query: 788 YFLTHKLTDKS-DVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGS 846
L K KS D++S+G + E+L+ +PI GK+ + ++N I G +GS
Sbjct: 218 IMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLN----------HILGILGS 266
Query: 847 YPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIW-NMMPESDTKTPEFINXXXXXX 905
E + I + ++ + PS ++V W + P+SD+K + ++
Sbjct: 267 PSQEDLNCIINMK---ARNYLQSLPSKTKVA------WAKLFPKSDSKALDLLDRMLTFN 317
Query: 906 XXXXXXXXXMLKHPYVSS 923
L HPY+
Sbjct: 318 PNKRITVEEALAHPYLEQ 335
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 117/270 (43%), Gaps = 25/270 (9%)
Query: 611 FNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQ-EGSLQGEKEFLTEIQFLSRLHHRNLV 668
F +IG+G +G+VYKGI VVA+K E + ++ EI LS+ +
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYIT 80
Query: 669 SLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEAD 728
G + + ++ E++ G+ D L E A L L +G+ YLH+E
Sbjct: 81 RYFGSYLKSTKLWIIMEYLGGGSALDLLKPGPLEETYIATILREIL---KGLDYLHSERK 137
Query: 729 PPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEY 788
HRDIKA+N+LL + K+ADFG++ I+ GTP ++ PE
Sbjct: 138 ---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIK-------RNXFVGTPFWMAPEV 187
Query: 789 FLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYP 848
K+D++SLG+ +EL G P S + ++F + + +
Sbjct: 188 IKQSAYDFKADIWSLGITAIELAKGEPPNSD----------LHPMRVLFLIPKNSPPTLE 237
Query: 849 SECVEKFIKLALKCCQDETDARPSMSEVMR 878
+ + F + C + RP+ E+++
Sbjct: 238 GQHSKPFKEFVEACLNKDPRFRPTAKELLK 267
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 68.9 bits (167), Expect = 1e-11, Method: Composition-based stats.
Identities = 63/216 (29%), Positives = 106/216 (49%), Gaps = 27/216 (12%)
Query: 617 IGQGGYGKVYKGILPDGT----VVAVKRAQEGSLQGEKEFLTEIQ--FLSRLHHRNLVSL 670
+GQG +GKV+ G+ + A+K ++ +L+ T+++ L ++H +V L
Sbjct: 33 LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKL 92
Query: 671 VGYCDEEGEQMLVYEFMSNGTLRDQLSAK---SKEPLGFAM-RLSIALGSSRGILYLHTE 726
EG+ L+ +F+ G L +LS + ++E + F + L++AL +LH+
Sbjct: 93 HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALD------HLHSL 146
Query: 727 ADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDP 786
+ +RD+K NILLD + K+ DFGLS+ E I + GT Y+ P
Sbjct: 147 G---IIYRDLKPENILLDEEGHIKLTDFGLSK-------ESIDHEKKAYSFCGTVEYMAP 196
Query: 787 EYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKN 822
E T +D +S GV+ E+LTG P GK+
Sbjct: 197 EVVNRRGHTQSADWWSFGVLMFEMLTGTLPF-QGKD 231
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 68.9 bits (167), Expect = 1e-11, Method: Composition-based stats.
Identities = 63/216 (29%), Positives = 106/216 (49%), Gaps = 27/216 (12%)
Query: 617 IGQGGYGKVYKGILPDGT----VVAVKRAQEGSLQGEKEFLTEIQ--FLSRLHHRNLVSL 670
+GQG +GKV+ G+ + A+K ++ +L+ T+++ L ++H +V L
Sbjct: 32 LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKL 91
Query: 671 VGYCDEEGEQMLVYEFMSNGTLRDQLSAK---SKEPLGFAM-RLSIALGSSRGILYLHTE 726
EG+ L+ +F+ G L +LS + ++E + F + L++AL +LH+
Sbjct: 92 HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALD------HLHSL 145
Query: 727 ADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDP 786
+ +RD+K NILLD + K+ DFGLS+ E I + GT Y+ P
Sbjct: 146 G---IIYRDLKPENILLDEEGHIKLTDFGLSK-------ESIDHEKKAYSFCGTVEYMAP 195
Query: 787 EYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKN 822
E T +D +S GV+ E+LTG P GK+
Sbjct: 196 EVVNRRGHTQSADWWSFGVLMFEMLTGTLPF-QGKD 230
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 134/321 (41%), Gaps = 38/321 (11%)
Query: 611 FNSSTQIGQGGYGKV---YKGILPDGTVVAVKRAQEGSLQGE-KEFLTEIQFLSRLHHRN 666
+ + + IG+G YG V Y + + VA+K+ Q + L EI+ L R H N
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 86
Query: 667 LVSLVGYCDEEG-EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHT 725
++ + EQM + + D + L RG+ Y+H+
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 146
Query: 726 EADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA-PVPDIEGIVPAHVSTVVKGTPGYL 784
V HRD+K SN+LL+ K+ DFGL+R+A P D G + V+ T Y
Sbjct: 147 AN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVA-----TRWYR 198
Query: 785 DPEYFLTHKLTDKS-DVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 843
PE L K KS D++S+G + E+L+ +PI GK+ + ++N I G
Sbjct: 199 APEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLN----------HILGI 247
Query: 844 MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN-MMPESDTKTPEFINXXX 902
+GS E + I L AR + + + + WN + P +D+K + ++
Sbjct: 248 LGSPSQEDLNCIINLK---------ARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKML 298
Query: 903 XXXXXXXXXXXXMLKHPYVSS 923
L HPY+
Sbjct: 299 TFNPHKRIEVEQALAHPYLEQ 319
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 134/321 (41%), Gaps = 38/321 (11%)
Query: 611 FNSSTQIGQGGYGKV---YKGILPDGTVVAVKRAQEGSLQGE-KEFLTEIQFLSRLHHRN 666
+ + + IG+G YG V Y + + VA+K+ Q + L EI+ L R H N
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 87
Query: 667 LVSLVGYCDEEG-EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHT 725
++ + EQM + + D + L RG+ Y+H+
Sbjct: 88 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 147
Query: 726 EADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA-PVPDIEGIVPAHVSTVVKGTPGYL 784
V HRD+K SN+LL+ K+ DFGL+R+A P D G + V+ T Y
Sbjct: 148 AN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVA-----TRWYR 199
Query: 785 DPEYFLTHKLTDKS-DVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 843
PE L K KS D++S+G + E+L+ +PI GK+ + ++N I G
Sbjct: 200 APEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLN----------HILGI 248
Query: 844 MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN-MMPESDTKTPEFINXXX 902
+GS E + I L AR + + + + WN + P +D+K + ++
Sbjct: 249 LGSPSQEDLNCIINLK---------ARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKML 299
Query: 903 XXXXXXXXXXXXMLKHPYVSS 923
L HPY+
Sbjct: 300 TFNPHKRIEVEQALAHPYLEQ 320
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 102/229 (44%), Gaps = 17/229 (7%)
Query: 606 LATNNFNSSTQIGQGGYGKVYK-GILPDGTVVAVKRAQEGSLQ---GEKEFLTEIQFLSR 661
+ N F +G+GG+G+V + G + A K+ ++ ++ GE L E Q L +
Sbjct: 181 VTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEK 240
Query: 662 LHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGIL 721
++ R +VSL + + LV M+ G L+ + + A + A G+
Sbjct: 241 VNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLE 300
Query: 722 YLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD-IEGIVPAHVSTVVKGT 780
LH E + +RD+K NILLD +++D GL+ P I+G V GT
Sbjct: 301 DLHRER---IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRV---------GT 348
Query: 781 PGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNI 829
GY+ PE + T D ++LG + E++ G P K ++ +
Sbjct: 349 VGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEV 397
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 102/229 (44%), Gaps = 17/229 (7%)
Query: 606 LATNNFNSSTQIGQGGYGKVYK-GILPDGTVVAVKRAQEGSLQ---GEKEFLTEIQFLSR 661
+ N F +G+GG+G+V + G + A K+ ++ ++ GE L E Q L +
Sbjct: 181 VTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEK 240
Query: 662 LHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGIL 721
++ R +VSL + + LV M+ G L+ + + A + A G+
Sbjct: 241 VNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLE 300
Query: 722 YLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD-IEGIVPAHVSTVVKGT 780
LH E + +RD+K NILLD +++D GL+ P I+G V GT
Sbjct: 301 DLHRER---IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRV---------GT 348
Query: 781 PGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNI 829
GY+ PE + T D ++LG + E++ G P K ++ +
Sbjct: 349 VGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEV 397
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 131/300 (43%), Gaps = 44/300 (14%)
Query: 616 QIGQGGYGKVY----KGILPDGTVVAVKRAQ--EGSLQGE--------KEFLTEIQFLSR 661
++G G YG+V K + + +K++Q +G + +E EI L
Sbjct: 43 KLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKS 102
Query: 662 LHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGIL 721
L H N++ L +++ LV EF G L +Q+ + K A + + S GI
Sbjct: 103 LDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILS--GIC 160
Query: 722 YLHTEADPPVFHRDIKASNILLDHK---FTAKVADFGLSRLAPVPDIEGIVPAHVSTVVK 778
YLH + HRDIK NILL++K K+ DFGLS +
Sbjct: 161 YLHKH---NIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFS--------KDYKLRDRL 209
Query: 779 GTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPI--SHGKNIVREVNIAYQSSMM 836
GT Y+ PE L K +K DV+S GV+ LL G P + ++I+++V +
Sbjct: 210 GTAYYIAPE-VLKKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVE---KGKYY 265
Query: 837 FSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVM--RELESIWNMMPESDTKT 894
F D N S+ ++ IKL L + + R + E + R ++ N + +SD KT
Sbjct: 266 F---DFNDWKNISDEAKELIKLMLTY---DYNKRCTAEEALNSRWIKKYANNINKSDQKT 319
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 68.6 bits (166), Expect = 1e-11, Method: Composition-based stats.
Identities = 60/203 (29%), Positives = 94/203 (46%), Gaps = 13/203 (6%)
Query: 617 IGQGGYGKVYKGI-LPDGTVVAVKRAQ-EGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYC 674
+G+G YG+V + VAVK + ++ + EI L+H N+V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 675 DEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHR 734
E Q L E+ S G L D++ P A R L + G++YLH + HR
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHGIG---ITHR 128
Query: 735 DIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKL 794
DIK N+LLD + K++DFGL+ + + E ++ + GT Y+ PE +
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLL-----NKMXGTLPYVAPELLKRREF 183
Query: 795 -TDKSDVYSLGVVFLELLTGMQP 816
+ DV+S G+V +L G P
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 135/321 (42%), Gaps = 38/321 (11%)
Query: 611 FNSSTQIGQGGYGKV---YKGILPDGTVVAVKRAQEGSLQGE-KEFLTEIQFLSRLHHRN 666
+ + + IG+G YG V Y + + VA+K+ Q + L EI+ L H N
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHEN 84
Query: 667 LVSLVGYCDEEG-EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHT 725
++ + EQM + + D + L RG+ Y+H+
Sbjct: 85 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 144
Query: 726 EADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA-PVPDIEGIVPAHVSTVVKGTPGYL 784
V HRD+K SN+LL+ K+ DFGL+R+A P D G + +V+ T Y
Sbjct: 145 AN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA-----TRWYR 196
Query: 785 DPEYFLTHKLTDKS-DVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 843
PE L K KS D++S+G + E+L+ +PI GK+ + ++N I G
Sbjct: 197 APEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLN----------HILGI 245
Query: 844 MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN-MMPESDTKTPEFINXXX 902
+GS E + I L AR + + + + WN + P +D+K + ++
Sbjct: 246 LGSPSQEDLNCIINLK---------ARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKML 296
Query: 903 XXXXXXXXXXXXMLKHPYVSS 923
L HPY++
Sbjct: 297 TFNPHKRIEVEQALAHPYLAQ 317
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 68.6 bits (166), Expect = 2e-11, Method: Composition-based stats.
Identities = 66/217 (30%), Positives = 93/217 (42%), Gaps = 23/217 (10%)
Query: 606 LATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVK--RAQEGSLQGEKEFLTEIQFLSRL 662
+AT+ + +IG G YG VYK P G VA+K R G + E+ L RL
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRL 60
Query: 663 H---HRNLVSLVGYC-----DEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIAL 714
H N+V L+ C D E + LV+E + LR L L +
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMR 119
Query: 715 GSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVS 774
RG+ +LH + HRD+K NIL+ T K+ADFGL+R+ + P V
Sbjct: 120 QFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQ--MALAPVVV- 173
Query: 775 TVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELL 811
T Y PE L D++S+G +F E+
Sbjct: 174 -----TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 96/227 (42%), Gaps = 41/227 (18%)
Query: 611 FNSSTQIGQGGYGKVYKGILPD-GTVVAVKRA-QEGSLQGEKEFLTEIQFLSRLHHRNLV 668
+ ++G GG+G V + I D G VA+K+ QE S + + + EIQ + +L+H N+V
Sbjct: 17 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 76
Query: 669 SLVGYCDEEGEQ--------MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGI 720
S D G Q +L E+ G LR L+ F + G R +
Sbjct: 77 SAREVPD--GLQKLAPNDLPLLAMEYCEGGDLRKYLNQ-------FENCCGLKEGPIRTL 127
Query: 721 L--------YLHTEADPPVFHRDIKASNILLD---HKFTAKVADFGLSRLAPVPDIEGIV 769
L YLH + HRD+K NI+L + K+ D G ++ +
Sbjct: 128 LSDISSALRYLHENR---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAK--------ELD 176
Query: 770 PAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQP 816
+ T GT YL PE K T D +S G + E +TG +P
Sbjct: 177 QGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRP 223
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 96/227 (42%), Gaps = 41/227 (18%)
Query: 611 FNSSTQIGQGGYGKVYKGILPD-GTVVAVKRA-QEGSLQGEKEFLTEIQFLSRLHHRNLV 668
+ ++G GG+G V + I D G VA+K+ QE S + + + EIQ + +L+H N+V
Sbjct: 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 75
Query: 669 SLVGYCDEEGEQ--------MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGI 720
S D G Q +L E+ G LR L+ F + G R +
Sbjct: 76 SAREVPD--GLQKLAPNDLPLLAMEYCEGGDLRKYLNQ-------FENCCGLKEGPIRTL 126
Query: 721 L--------YLHTEADPPVFHRDIKASNILLD---HKFTAKVADFGLSRLAPVPDIEGIV 769
L YLH + HRD+K NI+L + K+ D G ++ +
Sbjct: 127 LSDISSALRYLHENR---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAK--------ELD 175
Query: 770 PAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQP 816
+ T GT YL PE K T D +S G + E +TG +P
Sbjct: 176 QGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRP 222
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 97/218 (44%), Gaps = 30/218 (13%)
Query: 611 FNSSTQIGQGGYGKVYKGILPD----GTVVAVKRAQEGSLQG-EKEFLTEIQFLSRLHHR 665
F +G G + +V +L + G + AVK + +L+G E EI L ++ H
Sbjct: 24 FEFKETLGTGAFSEV---VLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHE 80
Query: 666 NLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSR---GILY 722
N+V+L + LV + +S G L D++ K GF + + + Y
Sbjct: 81 NIVALEDIYESPNHLYLVMQLVSGGELFDRIVEK-----GFYTEKDASTLIRQVLDAVYY 135
Query: 723 LHTEADPPVFHRDIKASNILL---DHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKG 779
LH + HRD+K N+L D + ++DFGLS++ D+ +ST G
Sbjct: 136 LHRMG---IVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDV-------MSTAC-G 184
Query: 780 TPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPI 817
TPGY+ PE + D +S+GV+ LL G P
Sbjct: 185 TPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPF 222
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 68.6 bits (166), Expect = 2e-11, Method: Composition-based stats.
Identities = 60/203 (29%), Positives = 95/203 (46%), Gaps = 13/203 (6%)
Query: 617 IGQGGYGKVYKGI-LPDGTVVAVKRAQ-EGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYC 674
+G+G YG+V + VAVK + ++ + EI + L+H N+V G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYGHR 74
Query: 675 DEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHR 734
E Q L E+ S G L D++ P A R L + G++YLH + HR
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHGIG---ITHR 129
Query: 735 DIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKL 794
DIK N+LLD + K++DFGL+ + + E ++ + GT Y+ PE +
Sbjct: 130 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLL-----NKMCGTLPYVAPELLKRREF 184
Query: 795 -TDKSDVYSLGVVFLELLTGMQP 816
+ DV+S G+V +L G P
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELP 207
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 68.2 bits (165), Expect = 2e-11, Method: Composition-based stats.
Identities = 66/217 (30%), Positives = 93/217 (42%), Gaps = 23/217 (10%)
Query: 606 LATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVK--RAQEGSLQGEKEFLTEIQFLSRL 662
+AT+ + +IG G YG VYK P G VA+K R G + E+ L RL
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRL 60
Query: 663 H---HRNLVSLVGYC-----DEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIAL 714
H N+V L+ C D E + LV+E + LR L L +
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMR 119
Query: 715 GSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVS 774
RG+ +LH + HRD+K NIL+ T K+ADFGL+R+ + P V
Sbjct: 120 QFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQ--MALFPVVV- 173
Query: 775 TVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELL 811
T Y PE L D++S+G +F E+
Sbjct: 174 -----TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 103/230 (44%), Gaps = 31/230 (13%)
Query: 599 FTYGEMALATNNFNSSTQIGQGGYGKVY----KGILPDGTVVAVKRAQEGSLQGEKEFLT 654
F A+ ++ + +G+G +G+V K + V + + Q ++ L
Sbjct: 16 FVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLR 75
Query: 655 EIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIAL 714
E+Q L +L H N++ L + +++G LV E + G L D++ ++ + A R+ +
Sbjct: 76 EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQV 135
Query: 715 GSSRGILYLHTEADPPVFHRDIKASNILLDHK---FTAKVADFGLSRLAPVPDIEGIVPA 771
S GI Y+H + HRD+K N+LL+ K ++ DFGLS
Sbjct: 136 LS--GITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLS-------------T 177
Query: 772 HVSTVVK-----GTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQP 816
H K GT Y+ PE L +K DV+S GV+ LL+G P
Sbjct: 178 HFEASKKMKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSGCPP 226
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 101/236 (42%), Gaps = 25/236 (10%)
Query: 604 MALATNNFNSSTQIGQGGYGKVYKG--ILPDGTVVAVKR-----AQEGSLQGEKEFLTEI 656
+ A + +IG+G YGKV+K + G VA+KR +EG + +
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 657 QFLSRLHHRNLVSLVGYC-----DEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLS 711
+ L H N+V L C D E + LV+E + L L + +
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQD-LTTYLDKVPEPGVPTETIKD 124
Query: 712 IALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPA 771
+ RG+ +LH+ V HRD+K NIL+ K+ADFGL+R I A
Sbjct: 125 MMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLAR------IYSFQMA 175
Query: 772 HVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREV 827
S VV T Y PE L D++S+G +F E+ +P+ G + V ++
Sbjct: 176 LTSVVV--TLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPLFRGSSDVDQL 228
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 99/203 (48%), Gaps = 16/203 (7%)
Query: 616 QIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYC 674
+IGQG G VY + + G VA+++ ++ + EI + + N+V+ +
Sbjct: 27 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY 86
Query: 675 DEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHR 734
E +V E+++ G+L D ++ + A ++ + + +LH+ V HR
Sbjct: 87 LVGDELWVVMEYLAGGSLTDVVTETCMDEGQIA---AVCRECLQALEFLHSNQ---VIHR 140
Query: 735 DIKASNILLDHKFTAKVADFGL-SRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHK 793
DIK+ NILL + K+ DFG +++ P + ST+V GTP ++ PE
Sbjct: 141 DIKSDNILLGMDGSVKLTDFGFCAQITP-------EQSKRSTMV-GTPYWMAPEVVTRKA 192
Query: 794 LTDKSDVYSLGVVFLELLTGMQP 816
K D++SLG++ +E++ G P
Sbjct: 193 YGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 67.8 bits (164), Expect = 3e-11, Method: Composition-based stats.
Identities = 60/203 (29%), Positives = 94/203 (46%), Gaps = 13/203 (6%)
Query: 617 IGQGGYGKVYKGI-LPDGTVVAVKRAQ-EGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYC 674
+G+G YG+V + VAVK + ++ + EI L+H N+V G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 675 DEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHR 734
E Q L E+ S G L D++ P A R L + G++YLH + HR
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHGIG---ITHR 129
Query: 735 DIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKL 794
DIK N+LLD + K++DFGL+ + + E ++ + GT Y+ PE +
Sbjct: 130 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLL-----NKMCGTLPYVAPELLKRREF 184
Query: 795 -TDKSDVYSLGVVFLELLTGMQP 816
+ DV+S G+V +L G P
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELP 207
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 67.8 bits (164), Expect = 3e-11, Method: Composition-based stats.
Identities = 60/203 (29%), Positives = 94/203 (46%), Gaps = 13/203 (6%)
Query: 617 IGQGGYGKVYKGI-LPDGTVVAVKRAQ-EGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYC 674
+G+G YG+V + VAVK + ++ + EI L+H N+V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 675 DEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHR 734
E Q L E+ S G L D++ P A R L + G++YLH + HR
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHGIG---ITHR 128
Query: 735 DIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKL 794
DIK N+LLD + K++DFGL+ + + E ++ + GT Y+ PE +
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLL-----NKMCGTLPYVAPELLKRREF 183
Query: 795 -TDKSDVYSLGVVFLELLTGMQP 816
+ DV+S G+V +L G P
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 67.8 bits (164), Expect = 3e-11, Method: Composition-based stats.
Identities = 60/203 (29%), Positives = 94/203 (46%), Gaps = 13/203 (6%)
Query: 617 IGQGGYGKVYKGI-LPDGTVVAVKRAQ-EGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYC 674
+G+G YG+V + VAVK + ++ + EI L+H N+V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 675 DEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHR 734
E Q L E+ S G L D++ P A R L + G++YLH + HR
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHGIG---ITHR 128
Query: 735 DIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKL 794
DIK N+LLD + K++DFGL+ + + E ++ + GT Y+ PE +
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLL-----NKMCGTLPYVAPELLKRREF 183
Query: 795 -TDKSDVYSLGVVFLELLTGMQP 816
+ DV+S G+V +L G P
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 67.8 bits (164), Expect = 3e-11, Method: Composition-based stats.
Identities = 60/203 (29%), Positives = 94/203 (46%), Gaps = 13/203 (6%)
Query: 617 IGQGGYGKVYKGI-LPDGTVVAVKRAQ-EGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYC 674
+G+G YG+V + VAVK + ++ + EI L+H N+V G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 675 DEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHR 734
E Q L E+ S G L D++ P A R L + G++YLH + HR
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHGIG---ITHR 129
Query: 735 DIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKL 794
DIK N+LLD + K++DFGL+ + + E ++ + GT Y+ PE +
Sbjct: 130 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLL-----NKMCGTLPYVAPELLKRREF 184
Query: 795 -TDKSDVYSLGVVFLELLTGMQP 816
+ DV+S G+V +L G P
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELP 207
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 67.8 bits (164), Expect = 3e-11, Method: Composition-based stats.
Identities = 60/203 (29%), Positives = 94/203 (46%), Gaps = 13/203 (6%)
Query: 617 IGQGGYGKVYKGI-LPDGTVVAVKRAQ-EGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYC 674
+G+G YG+V + VAVK + ++ + EI L+H N+V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 675 DEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHR 734
E Q L E+ S G L D++ P A R L + G++YLH + HR
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHGIG---ITHR 128
Query: 735 DIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKL 794
DIK N+LLD + K++DFGL+ + + E ++ + GT Y+ PE +
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLL-----NKMCGTLPYVAPELLKRREF 183
Query: 795 -TDKSDVYSLGVVFLELLTGMQP 816
+ DV+S G+V +L G P
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 67.8 bits (164), Expect = 3e-11, Method: Composition-based stats.
Identities = 60/203 (29%), Positives = 94/203 (46%), Gaps = 13/203 (6%)
Query: 617 IGQGGYGKVYKGI-LPDGTVVAVKRAQ-EGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYC 674
+G+G YG+V + VAVK + ++ + EI L+H N+V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 675 DEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHR 734
E Q L E+ S G L D++ P A R L + G++YLH + HR
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHGIG---ITHR 128
Query: 735 DIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKL 794
DIK N+LLD + K++DFGL+ + + E ++ + GT Y+ PE +
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLL-----NKMCGTLPYVAPELLKRREF 183
Query: 795 -TDKSDVYSLGVVFLELLTGMQP 816
+ DV+S G+V +L G P
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 98/224 (43%), Gaps = 27/224 (12%)
Query: 608 TNNFNSSTQIGQGGYGKVYKG---ILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHH 664
+N +G+G +G+V K I V V + L E++ L +L H
Sbjct: 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH 80
Query: 665 RNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLH 724
N++ L ++ +V E + G L D++ + + A R+ + S GI Y+H
Sbjct: 81 PNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFS--GITYMH 138
Query: 725 TEADPPVFHRDIKASNILLDHK---FTAKVADFGLSRLAPVPDIEGIVPAHVSTVVK--- 778
+ HRD+K NILL+ K K+ DFGLS +T +K
Sbjct: 139 KHN---IVHRDLKPENILLESKEKDCDIKIIDFGLS-----------TCFQQNTKMKDRI 184
Query: 779 GTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKN 822
GT Y+ PE L +K DV+S GV+ LL+G P +GKN
Sbjct: 185 GTAYYIAPE-VLRGTYDEKCDVWSAGVILYILLSGTPPF-YGKN 226
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 67.8 bits (164), Expect = 3e-11, Method: Composition-based stats.
Identities = 66/233 (28%), Positives = 100/233 (42%), Gaps = 25/233 (10%)
Query: 607 ATNNFNSSTQIGQGGYGKVYKG--ILPDGTVVAVKR-----AQEGSLQGEKEFLTEIQFL 659
A + +IG+G YGKV+K + G VA+KR +EG + ++ L
Sbjct: 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 68
Query: 660 SRLHHRNLVSLVGYC-----DEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIAL 714
H N+V L C D E + LV+E + L L + + +
Sbjct: 69 ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMF 127
Query: 715 GSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVS 774
RG+ +LH+ V HRD+K NIL+ K+ADFGL+R I A S
Sbjct: 128 QLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLAR------IYSFQMALTS 178
Query: 775 TVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREV 827
VV T Y PE L D++S+G +F E+ +P+ G + V ++
Sbjct: 179 VVV--TLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPLFRGSSDVDQL 228
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 67.8 bits (164), Expect = 3e-11, Method: Composition-based stats.
Identities = 66/233 (28%), Positives = 100/233 (42%), Gaps = 25/233 (10%)
Query: 607 ATNNFNSSTQIGQGGYGKVYKG--ILPDGTVVAVKR-----AQEGSLQGEKEFLTEIQFL 659
A + +IG+G YGKV+K + G VA+KR +EG + ++ L
Sbjct: 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 68
Query: 660 SRLHHRNLVSLVGYC-----DEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIAL 714
H N+V L C D E + LV+E + L L + + +
Sbjct: 69 ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMF 127
Query: 715 GSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVS 774
RG+ +LH+ V HRD+K NIL+ K+ADFGL+R I A S
Sbjct: 128 QLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLAR------IYSFQMALTS 178
Query: 775 TVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREV 827
VV T Y PE L D++S+G +F E+ +P+ G + V ++
Sbjct: 179 VVV--TLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPLFRGSSDVDQL 228
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 96/212 (45%), Gaps = 13/212 (6%)
Query: 608 TNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQ-EGSLQGEKEFLTEIQFLSRLHHR 665
+++ +G+G G+V + VAVK + ++ + EI L+H
Sbjct: 5 VEDWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 666 NLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHT 725
N+V G+ E Q L E+ S G L D++ P A R L + G++YLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 122
Query: 726 EADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLD 785
+ HRDIK N+LLD + K++DFGL+ + + E ++ + GT Y+
Sbjct: 123 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL-----NKMCGTLPYVA 174
Query: 786 PEYFLTHKL-TDKSDVYSLGVVFLELLTGMQP 816
PE + + DV+S G+V +L G P
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 98/224 (43%), Gaps = 27/224 (12%)
Query: 608 TNNFNSSTQIGQGGYGKVYKG---ILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHH 664
+N +G+G +G+V K I V V + L E++ L +L H
Sbjct: 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH 80
Query: 665 RNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLH 724
N++ L ++ +V E + G L D++ + + A R+ + S GI Y+H
Sbjct: 81 PNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFS--GITYMH 138
Query: 725 TEADPPVFHRDIKASNILLDHK---FTAKVADFGLSRLAPVPDIEGIVPAHVSTVVK--- 778
+ HRD+K NILL+ K K+ DFGLS +T +K
Sbjct: 139 KHN---IVHRDLKPENILLESKEKDCDIKIIDFGLS-----------TCFQQNTKMKDRI 184
Query: 779 GTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKN 822
GT Y+ PE L +K DV+S GV+ LL+G P +GKN
Sbjct: 185 GTAYYIAPE-VLRGTYDEKCDVWSAGVILYILLSGTPPF-YGKN 226
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 102/224 (45%), Gaps = 29/224 (12%)
Query: 617 IGQGGYGKVYK----GILPDGTVVAVKRAQEGSL----QGEKEFLTEIQFLSRLHHRNLV 668
+G+GGYGKV++ G + A+K ++ + + E L + H +V
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIV 84
Query: 669 SLVGYCDEEGEQMLVYEFMSNGTLRDQLSAK----SKEPLGFAMRLSIALGSSRGILYLH 724
L+ G+ L+ E++S G L QL + + +S+ALG +LH
Sbjct: 85 DLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALG------HLH 138
Query: 725 TEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYL 784
+ + +RD+K NI+L+H+ K+ DFGL + E I V+ GT Y+
Sbjct: 139 QKG---IIYRDLKPENIMLNHQGHVKLTDFGLCK-------ESIHDGTVTHTFCGTIEYM 188
Query: 785 DPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVN 828
PE + D +SLG + ++LTG P + G+N + ++
Sbjct: 189 APEILMRSGHNRAVDWWSLGALMYDMLTGAPPFT-GENRKKTID 231
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 103/230 (44%), Gaps = 31/230 (13%)
Query: 599 FTYGEMALATNNFNSSTQIGQGGYGKVY----KGILPDGTVVAVKRAQEGSLQGEKEFLT 654
F A+ ++ + +G+G +G+V K + V + + Q ++ L
Sbjct: 39 FVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLR 98
Query: 655 EIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIAL 714
E+Q L +L H N++ L + +++G LV E + G L D++ ++ + A R+ +
Sbjct: 99 EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQV 158
Query: 715 GSSRGILYLHTEADPPVFHRDIKASNILLDHK---FTAKVADFGLSRLAPVPDIEGIVPA 771
S GI Y+H + HRD+K N+LL+ K ++ DFGLS
Sbjct: 159 LS--GITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLS-------------T 200
Query: 772 HVSTVVK-----GTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQP 816
H K GT Y+ PE L +K DV+S GV+ LL+G P
Sbjct: 201 HFEASKKMKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSGCPP 249
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 103/230 (44%), Gaps = 31/230 (13%)
Query: 599 FTYGEMALATNNFNSSTQIGQGGYGKVY----KGILPDGTVVAVKRAQEGSLQGEKEFLT 654
F A+ ++ + +G+G +G+V K + V + + Q ++ L
Sbjct: 40 FVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLR 99
Query: 655 EIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIAL 714
E+Q L +L H N++ L + +++G LV E + G L D++ ++ + A R+ +
Sbjct: 100 EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQV 159
Query: 715 GSSRGILYLHTEADPPVFHRDIKASNILLDHK---FTAKVADFGLSRLAPVPDIEGIVPA 771
S GI Y+H + HRD+K N+LL+ K ++ DFGLS
Sbjct: 160 LS--GITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLS-------------T 201
Query: 772 HVSTVVK-----GTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQP 816
H K GT Y+ PE L +K DV+S GV+ LL+G P
Sbjct: 202 HFEASKKMKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSGCPP 250
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 104/222 (46%), Gaps = 22/222 (9%)
Query: 609 NNFNSSTQIGQGGYGKVYKGILPDG-TVVAVKRAQEGSLQGEKE-----FLTEIQFLSRL 662
+ +IG+G YG V+K + +VA+KR + L + E L EI L L
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVR---LDDDDEGVPSSALREICLLKEL 58
Query: 663 HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILY 722
H+N+V L + + LV+EF + L+ + + + L + S +G+ +
Sbjct: 59 KHKNIVRLHDVLHSDKKLTLVFEF-CDQDLKKYFDSCNGD-LDPEIVKSFLFQLLKGLGF 116
Query: 723 LHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPG 782
H+ V HRD+K N+L++ K+A+FGL+R +P V + + VV T
Sbjct: 117 CHSRN---VLHRDLKPQNLLINRNGELKLANFGLARAFGIP-----VRCYSAEVV--TLW 166
Query: 783 YLDPEYFLTHKLTDKS-DVYSLGVVFLELLTGMQPISHGKNI 823
Y P+ KL S D++S G +F EL +P+ G ++
Sbjct: 167 YRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDV 208
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 67.4 bits (163), Expect = 4e-11, Method: Composition-based stats.
Identities = 66/217 (30%), Positives = 93/217 (42%), Gaps = 23/217 (10%)
Query: 606 LATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVK--RAQEGSLQGEKEFLTEIQFLSRL 662
+AT+ + +IG G YG VYK P G VA+K R G + E+ L RL
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRL 60
Query: 663 H---HRNLVSLVGYC-----DEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIAL 714
H N+V L+ C D E + LV+E + LR L L +
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMR 119
Query: 715 GSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVS 774
RG+ +LH + HRD+K NIL+ T K+ADFGL+R+ + P V
Sbjct: 120 QFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQ--MALDPVVV- 173
Query: 775 TVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELL 811
T Y PE L D++S+G +F E+
Sbjct: 174 -----TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 98/221 (44%), Gaps = 27/221 (12%)
Query: 611 FNSSTQIGQGGYGKVYK---GILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNL 667
+N +G+G +G+V K I V V + L E++ L +L H N+
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNI 83
Query: 668 VSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEA 727
+ L ++ +V E + G L D++ + + A R+ + S GI Y+H
Sbjct: 84 MKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFS--GITYMHKH- 140
Query: 728 DPPVFHRDIKASNILLDHK---FTAKVADFGLSRLAPVPDIEGIVPAHVSTVVK---GTP 781
+ HRD+K NILL+ K K+ DFGLS +T +K GT
Sbjct: 141 --NIVHRDLKPENILLESKEKDCDIKIIDFGLS-----------TCFQQNTKMKDRIGTA 187
Query: 782 GYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKN 822
Y+ PE L +K DV+S GV+ LL+G P +GKN
Sbjct: 188 YYIAPE-VLRGTYDEKCDVWSAGVILYILLSGTPPF-YGKN 226
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 102/224 (45%), Gaps = 29/224 (12%)
Query: 617 IGQGGYGKVYK----GILPDGTVVAVKRAQEGSL----QGEKEFLTEIQFLSRLHHRNLV 668
+G+GGYGKV++ G + A+K ++ + + E L + H +V
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIV 84
Query: 669 SLVGYCDEEGEQMLVYEFMSNGTLRDQLSAK----SKEPLGFAMRLSIALGSSRGILYLH 724
L+ G+ L+ E++S G L QL + + +S+ALG +LH
Sbjct: 85 DLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALG------HLH 138
Query: 725 TEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYL 784
+ + +RD+K NI+L+H+ K+ DFGL + E I V+ GT Y+
Sbjct: 139 QKG---IIYRDLKPENIMLNHQGHVKLTDFGLCK-------ESIHDGTVTHXFCGTIEYM 188
Query: 785 DPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVN 828
PE + D +SLG + ++LTG P + G+N + ++
Sbjct: 189 APEILMRSGHNRAVDWWSLGALMYDMLTGAPPFT-GENRKKTID 231
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 66.6 bits (161), Expect = 5e-11, Method: Composition-based stats.
Identities = 64/216 (29%), Positives = 102/216 (47%), Gaps = 17/216 (7%)
Query: 616 QIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQG--EKEFLTEIQFLSRLHHRNLVSLVG 672
+IG+G YG V+K D G +VA+K+ E +K L EI+ L +L H NLV+L+
Sbjct: 10 KIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLE 69
Query: 673 YCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVF 732
+ LV+E+ + L + + P SI + + + + H
Sbjct: 70 VFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVK--SITWQTLQAVNFCHKHN---CI 124
Query: 733 HRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH 792
HRD+K NIL+ K+ DFG +RL + G P+ T Y PE +
Sbjct: 125 HRDVKPENILITKHSVIKLCDFGFARL-----LTG--PSDYYDDEVATRWYRSPELLVGD 177
Query: 793 -KLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREV 827
+ DV+++G VF ELL+G+ P+ GK+ V ++
Sbjct: 178 TQYGPPVDVWAIGCVFAELLSGV-PLWPGKSDVDQL 212
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 134/321 (41%), Gaps = 38/321 (11%)
Query: 611 FNSSTQIGQGGYGKV---YKGILPDGTVVAVKRAQEGSLQGE-KEFLTEIQFLSRLHHRN 666
+ + + IG+G YG V Y + + VA+K+ Q + L EI+ L H N
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHEN 84
Query: 667 LVSLVGYCDEEG-EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHT 725
++ + EQM + + D + L RG+ Y+H+
Sbjct: 85 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 144
Query: 726 EADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA-PVPDIEGIVPAHVSTVVKGTPGYL 784
V HRD+K SN+LL+ K+ DFGL+R+A P D G + +V+ T Y
Sbjct: 145 AN---VLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVA-----TRWYR 196
Query: 785 DPEYFLTHKLTDKS-DVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 843
PE L K KS D++S+G + E+L+ +PI GK+ + ++N I G
Sbjct: 197 APEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLN----------HILGI 245
Query: 844 MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN-MMPESDTKTPEFINXXX 902
+GS E + C AR + + + + WN + P +D+K + ++
Sbjct: 246 LGSPSQEDLN---------CGINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKML 296
Query: 903 XXXXXXXXXXXXMLKHPYVSS 923
L HPY++
Sbjct: 297 TFNPHKRIEVEQALAHPYLAQ 317
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 107/226 (47%), Gaps = 31/226 (13%)
Query: 609 NNFNSSTQIGQGGYGKVYKGILPDGT----VVAVKRAQEGSLQGEKEFLTEIQ--FLSRL 662
+ F +GQG +GKV+ G+ + A+K ++ +L+ T+++ L +
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 83
Query: 663 HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAK---SKEPLGFAM-RLSIALGS-- 716
+H +V L EG+ L+ +F+ G L +LS + ++E + F + L++AL
Sbjct: 84 NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLH 143
Query: 717 SRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTV 776
S GI+Y RD+K NILLD + K+ DFGLS+ E I +
Sbjct: 144 SLGIIY-----------RDLKPENILLDEEGHIKLTDFGLSK-------ESIDHEKKAYS 185
Query: 777 VKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKN 822
GT Y+ PE T +D +S GV+ E+LTG P GK+
Sbjct: 186 FCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQ-GKD 230
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 94/203 (46%), Gaps = 16/203 (7%)
Query: 616 QIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYC 674
+IGQG G VY + + G VA+++ ++ + EI + + N+V+ +
Sbjct: 27 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY 86
Query: 675 DEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHR 734
E +V E+++ G+L D ++ + A ++ + + +LH+ V HR
Sbjct: 87 LVGDELWVVMEYLAGGSLTDVVTETCMDEGQIA---AVCRECLQALEFLHSNQ---VIHR 140
Query: 735 DIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVS-TVVKGTPGYLDPEYFLTHK 793
DIK+ NILL + K+ DFG I P + + GTP ++ PE
Sbjct: 141 DIKSDNILLGMDGSVKLTDFGFC--------AQITPEQSKRSXMVGTPYWMAPEVVTRKA 192
Query: 794 LTDKSDVYSLGVVFLELLTGMQP 816
K D++SLG++ +E++ G P
Sbjct: 193 YGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 96/206 (46%), Gaps = 20/206 (9%)
Query: 617 IGQGGYGKVYKGILP-DGTVVAVK---RAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVG 672
+G G +GKV G G VAVK R + SL + EIQ L H +++ L
Sbjct: 24 LGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQ 83
Query: 673 YCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVF 732
+ +V E++S G L D + + + RL + S G+ Y H V
Sbjct: 84 VISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILS--GVDYCHRHM---VV 138
Query: 733 HRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH 792
HRD+K N+LLD AK+ADFGLS + + D E + + G+P Y PE ++
Sbjct: 139 HRDLKPENVLLDAHMNAKIADFGLSNM--MSDGEFLRXS------CGSPNYAAPE-VISG 189
Query: 793 KLTD--KSDVYSLGVVFLELLTGMQP 816
+L + D++S GV+ LL G P
Sbjct: 190 RLYAGPEVDIWSSGVILYALLCGTLP 215
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 66.6 bits (161), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 94/203 (46%), Gaps = 16/203 (7%)
Query: 616 QIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYC 674
+IGQG G VY + + G VA+++ ++ + EI + + N+V+ +
Sbjct: 28 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY 87
Query: 675 DEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHR 734
E +V E+++ G+L D ++ + A ++ + + +LH+ V HR
Sbjct: 88 LVGDELWVVMEYLAGGSLTDVVTETCMDEGQIA---AVCRECLQALEFLHSNQ---VIHR 141
Query: 735 DIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVS-TVVKGTPGYLDPEYFLTHK 793
DIK+ NILL + K+ DFG I P + + GTP ++ PE
Sbjct: 142 DIKSDNILLGMDGSVKLTDFGFCA--------QITPEQSKRSXMVGTPYWMAPEVVTRKA 193
Query: 794 LTDKSDVYSLGVVFLELLTGMQP 816
K D++SLG++ +E++ G P
Sbjct: 194 YGPKVDIWSLGIMAIEMIEGEPP 216
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 99/225 (44%), Gaps = 18/225 (8%)
Query: 603 EMALATNNFNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQGEKEF---LTEIQF 658
++ L +F +G+G +GKV+ A+K ++ + + + + E +
Sbjct: 12 QIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 71
Query: 659 LS-RLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSS 717
LS H L + + V E+++ G L + + K L A + +
Sbjct: 72 LSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEI--I 129
Query: 718 RGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVV 777
G+ +LH++ + +RD+K NILLD K+ADFG+ + E ++ +
Sbjct: 130 LGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCK-------ENMLGDAKTNEF 179
Query: 778 KGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKN 822
GTP Y+ PE L K D +S GV+ E+L G P HG++
Sbjct: 180 CGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPF-HGQD 223
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 100/206 (48%), Gaps = 15/206 (7%)
Query: 616 QIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYC 674
++G G +G V++ + G V K + EI +++LHH L++L
Sbjct: 58 ELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAF 117
Query: 675 DEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHR 734
+++ E +L+ EF+S G L D+++A+ + + A ++ + G+ ++H + + H
Sbjct: 118 EDKYEMVLILEFLSGGELFDRIAAEDYK-MSEAEVINYMRQACEGLKHMHEHS---IVHL 173
Query: 735 DIKASNILLDHK--FTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH 792
DIK NI+ + K + K+ DFGL+ + P + V T + PE
Sbjct: 174 DIKPENIMCETKKASSVKIIDFGLAT--------KLNPDEIVKVTTATAEFAAPEIVDRE 225
Query: 793 KLTDKSDVYSLGVVFLELLTGMQPIS 818
+ +D++++GV+ LL+G+ P +
Sbjct: 226 PVGFYTDMWAIGVLGYVLLSGLSPFA 251
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 101/230 (43%), Gaps = 31/230 (13%)
Query: 599 FTYGEMALATNNFNSSTQIGQGGYGKVY----KGILPDGTVVAVKRAQEGSLQGEKEFLT 654
F A+ ++ + +G+G +G+V K + V + + Q ++ L
Sbjct: 16 FVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLR 75
Query: 655 EIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIAL 714
E+Q L +L H N+ L + +++G LV E + G L D++ ++ + A R+ +
Sbjct: 76 EVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQV 135
Query: 715 GSSRGILYLHTEADPPVFHRDIKASNILLDHK---FTAKVADFGLSRLAPVPDIEGIVPA 771
S GI Y H + HRD+K N+LL+ K ++ DFGLS
Sbjct: 136 LS--GITYXHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLS-------------T 177
Query: 772 HVSTVVK-----GTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQP 816
H K GT Y+ PE L +K DV+S GV+ LL+G P
Sbjct: 178 HFEASKKXKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSGCPP 226
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 123/294 (41%), Gaps = 50/294 (17%)
Query: 617 IGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH-HRNLVSLVGYC 674
+ +GG+ VY+ + G A+KR + + + E+ F+ +L H N+V
Sbjct: 36 LAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAA 95
Query: 675 -------DEEGEQMLVYEFMSNGTLRDQLSA-KSKEPLGFAMRLSIALGSSRGILYLHTE 726
D + L+ + G L + L +S+ PL L I + R + ++H +
Sbjct: 96 SIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQ 155
Query: 727 ADPPVFHRDIKASNILLDHKFTAKVADFG-LSRLAPVPDI------EGIVPAHVSTVVKG 779
PP+ HRD+K N+LL ++ T K+ DFG + ++ PD +V ++
Sbjct: 156 -KPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITR--NT 212
Query: 780 TPGYLDPE---YFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAY----- 831
TP Y PE + + +K D+++LG + L P G + R VN Y
Sbjct: 213 TPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKL-RIVNGKYSIPPH 271
Query: 832 --QSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883
Q ++ S+I + P E R S++EV+ +L+ I
Sbjct: 272 DTQYTVFHSLIRAMLQVNPEE-------------------RLSIAEVVHQLQEI 306
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 94/203 (46%), Gaps = 16/203 (7%)
Query: 616 QIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYC 674
+IGQG G VY + + G VA+++ ++ + EI + + N+V+ +
Sbjct: 27 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY 86
Query: 675 DEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHR 734
E +V E+++ G+L D ++ + A ++ + + +LH+ V HR
Sbjct: 87 LVGDELWVVMEYLAGGSLTDVVTETCMDEGQIA---AVCRECLQALEFLHSNQ---VIHR 140
Query: 735 DIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVS-TVVKGTPGYLDPEYFLTHK 793
DIK+ NILL + K+ DFG I P + + GTP ++ PE
Sbjct: 141 DIKSDNILLGMDGSVKLTDFGFC--------AQITPEQSKRSEMVGTPYWMAPEVVTRKA 192
Query: 794 LTDKSDVYSLGVVFLELLTGMQP 816
K D++SLG++ +E++ G P
Sbjct: 193 YGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 99/203 (48%), Gaps = 16/203 (7%)
Query: 616 QIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYC 674
+IGQG G VY + + G VA+++ ++ + EI + + N+V+ +
Sbjct: 28 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY 87
Query: 675 DEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHR 734
E +V E+++ G+L D ++ + A ++ + + +LH+ V HR
Sbjct: 88 LVGDELWVVMEYLAGGSLTDVVTETCMDEGQIA---AVCRECLQALEFLHSNQ---VIHR 141
Query: 735 DIKASNILLDHKFTAKVADFGL-SRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHK 793
+IK+ NILL + K+ DFG +++ P + ST+V GTP ++ PE
Sbjct: 142 NIKSDNILLGMDGSVKLTDFGFCAQITPEQ-------SKRSTMV-GTPYWMAPEVVTRKA 193
Query: 794 LTDKSDVYSLGVVFLELLTGMQP 816
K D++SLG++ +E++ G P
Sbjct: 194 YGPKVDIWSLGIMAIEMIEGEPP 216
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 104/230 (45%), Gaps = 30/230 (13%)
Query: 611 FNSSTQIGQGGYGKVYKGILPDGTVVAVKRA------QEGSLQGEKEFLTEIQFLSRLHH 664
+ ++G G YG+V +L V V+RA S + L E+ L L H
Sbjct: 39 YQRVKKLGSGAYGEV---LLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDH 95
Query: 665 RNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSK-EPLGFAMRLSIALGSSRGILYL 723
N++ L + +++ LV E G L D++ + K + A+ + L G+ YL
Sbjct: 96 PNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLS---GVTYL 152
Query: 724 HTEADPPVFHRDIKASNILLDHK---FTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGT 780
H + HRD+K N+LL+ K K+ DFGLS V + + + + GT
Sbjct: 153 HKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLS---AVFENQKKMKERL-----GT 201
Query: 781 PGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPI--SHGKNIVREVN 828
Y+ PE L K +K DV+S+GV+ LL G P + I+R+V
Sbjct: 202 AYYIAPE-VLRKKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVE 250
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 125/282 (44%), Gaps = 26/282 (9%)
Query: 586 SSKTSIKIDGVRSFTYGEMALATNNFNSSTQIGQGGYGKVYK-GILPDGTVVAVKRAQE- 643
SS +S K G + N+ + ++G G G+V+K G V+AVK+ +
Sbjct: 2 SSGSSGKQTGYLTIGGQRYQAEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRS 61
Query: 644 GSLQGEKEFLTEIQFLSRLHH-RNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKE 702
G+ + K L ++ + + H +V G + + E M GT ++L + +
Sbjct: 62 GNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELM--GTCAEKLKKRMQG 119
Query: 703 PLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLS-RLA- 760
P+ + + + + + YL + V HRD+K SNILLD + K+ DFG+S RL
Sbjct: 120 PIPERILGKMTVAIVKALYYLKEKHG--VIHRDVKPSNILLDERGQIKLCDFGISGRLVD 177
Query: 761 -PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISH 819
D A+++ P P+Y + ++DV+SLG+ +EL TG P +
Sbjct: 178 DKAKDRSAGCAAYMAPERIDPPDPTKPDYDI------RADVWSLGISLVELATGQFPYKN 231
Query: 820 GK-------NIVREVNIAYQSSMMFSVIDGNMGSYPSECVEK 854
K +++E M FS G+ S+ +C+ K
Sbjct: 232 CKTDFEVLTKVLQEEPPLLPGHMGFS---GDFQSFVKDCLTK 270
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 99/225 (44%), Gaps = 18/225 (8%)
Query: 603 EMALATNNFNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQGEKEF---LTEIQF 658
++ L +F +G+G +GKV+ A+K ++ + + + + E +
Sbjct: 11 QIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 70
Query: 659 LS-RLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSS 717
LS H L + + V E+++ G L + + K L A + +
Sbjct: 71 LSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEI--I 128
Query: 718 RGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVV 777
G+ +LH++ + +RD+K NILLD K+ADFG+ + E ++ +
Sbjct: 129 LGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCK-------ENMLGDAKTNXF 178
Query: 778 KGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKN 822
GTP Y+ PE L K D +S GV+ E+L G P HG++
Sbjct: 179 CGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPF-HGQD 222
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 118/284 (41%), Gaps = 48/284 (16%)
Query: 616 QIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGE-KEFLTEIQFLSRLHH-RNLVSLVG 672
+IG+G YG V K + P G ++AVKR + + E K+ L ++ + R +V G
Sbjct: 29 EIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYG 88
Query: 673 YCDEEGEQMLVYEFMSNG----------TLRDQLSAKSKEPLGFAMRLSIALGSSRGILY 722
EG+ + E MS L D + +E LG I L + + +
Sbjct: 89 ALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIP---EEILG-----KITLATVKALN- 139
Query: 723 LHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPG 782
H + + + HRDIK SNILLD K+ DFG+S +V + T G
Sbjct: 140 -HLKENLKIIHRDIKPSNILLDRSGNIKLCDFGIS--------GQLVDSIAKTRDAGCRP 190
Query: 783 YLDPEYF---LTHKLTD-KSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFS 838
Y+ PE + + D +SDV+SLG+ EL TG P ++ ++
Sbjct: 191 YMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLT---------Q 241
Query: 839 VIDGN----MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMR 878
V+ G+ S E FI C + RP E+++
Sbjct: 242 VVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLK 285
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 65.5 bits (158), Expect = 1e-10, Method: Composition-based stats.
Identities = 55/187 (29%), Positives = 87/187 (46%), Gaps = 21/187 (11%)
Query: 652 FLTEIQFLSRLHHRNLVSLVGYCDEEGEQ------MLVYEFMSNGTLRDQLSAKSKEPLG 705
F E Q + L+H +V++ Y E E +V E++ TLRD + + P+
Sbjct: 59 FRREAQNAAALNHPAIVAV--YATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG--PMT 114
Query: 706 FAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 765
+ + + + + + H + HRD+K +NI++ KV DFG++R + D
Sbjct: 115 PKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIAR--AIADS 169
Query: 766 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVR 825
V + V GT YL PE + +SDVYSLG V E+LTG P +
Sbjct: 170 GNSVTQ--TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDS---- 223
Query: 826 EVNIAYQ 832
V++AYQ
Sbjct: 224 PVSVAYQ 230
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 113/272 (41%), Gaps = 36/272 (13%)
Query: 616 QIGQGGYGKVYKGILP-------DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLV 668
++G G +G V KG + A + +L+ E L E + +L + +V
Sbjct: 377 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALK--DELLAEANVMQQLDNPYIV 434
Query: 669 SLVGYCDEEGEQMLVYEFMSNGTLRDQLS----AKSKEPLGFAMRLSIALGSSRGILYLH 724
++G C+ E MLV E G L L K K + ++S+ G+ YL
Sbjct: 435 RMIGICEAES-WMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSM------GMKYLE 487
Query: 725 TEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYL 784
+ HRD+ A N+LL + AK++DFGLS+ + H VK +
Sbjct: 488 ---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVK----WY 540
Query: 785 DPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 844
PE +K + KSDV+S GV+ E S+G+ R + + ++M+ G
Sbjct: 541 APECINYYKFSSKSDVWSFGVLMWEAF------SYGQKPYRGMKGSEVTAMLEK---GER 591
Query: 845 GSYPSECVEKFIKLALKCCQDETDARPSMSEV 876
P+ C + L C + + RP + V
Sbjct: 592 MGCPAGCPREMYDLMNLCWTYDVENRPGFAAV 623
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 65.5 bits (158), Expect = 1e-10, Method: Composition-based stats.
Identities = 54/185 (29%), Positives = 86/185 (46%), Gaps = 17/185 (9%)
Query: 652 FLTEIQFLSRLHHRNLVSLVGYCDEEGEQ----MLVYEFMSNGTLRDQLSAKSKEPLGFA 707
F E Q + L+H +V++ + E +V E++ TLRD + + P+
Sbjct: 59 FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG--PMTPK 116
Query: 708 MRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEG 767
+ + + + + + H + HRD+K +NIL+ KV DFG++R + D
Sbjct: 117 RAIEVIADACQALNFSHQNG---IIHRDVKPANILISATNAVKVVDFGIAR--AIADSGN 171
Query: 768 IVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREV 827
V + V GT YL PE + +SDVYSLG V E+LTG P + V
Sbjct: 172 SVXQ--TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDS----PV 225
Query: 828 NIAYQ 832
++AYQ
Sbjct: 226 SVAYQ 230
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 96/222 (43%), Gaps = 33/222 (14%)
Query: 608 TNNFNSSTQIGQGGYGKVY----KGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH 663
++ + ++G G YG+V K + + +K++ + L E+ L +L
Sbjct: 20 SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD 79
Query: 664 HRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSK-EPLGFAMRLSIALGSSRGILY 722
H N++ L + +++ LV E G L D++ + K + A+ + L G Y
Sbjct: 80 HPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLS---GTTY 136
Query: 723 LHTEADPPVFHRDIKASNILLDHK---FTAKVADFGLSRLAPVPDIEGIVPAHVSTVVK- 778
LH + HRD+K N+LL+ K K+ DFGLS AH K
Sbjct: 137 LHKHN---IVHRDLKPENLLLESKSRDALIKIVDFGLS-------------AHFEVGGKM 180
Query: 779 ----GTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQP 816
GT Y+ PE L K +K DV+S GV+ LL G P
Sbjct: 181 KERLGTAYYIAPE-VLRKKYDEKCDVWSCGVILYILLCGYPP 221
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 98/228 (42%), Gaps = 21/228 (9%)
Query: 609 NNFNSSTQIGQGGYGKVYKGILPDGT-VVAVK---RAQEGSLQGEKEFLTEIQFLSRLHH 664
++F +G+G +G VY +VA+K ++Q E + EI+ + LHH
Sbjct: 23 DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHH 82
Query: 665 RNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLH 724
N++ L Y + L+ E+ G L +L +I + ++Y H
Sbjct: 83 PNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCT--FDEQRTATIMEELADALMYCH 140
Query: 725 TEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYL 784
+ V HRDIK N+LL K K+ADFG S A P+ + GT YL
Sbjct: 141 GKK---VIHRDIKPENLLLGLKGELKIADFGWSVHA---------PSLRRKTMCGTLDYL 188
Query: 785 DPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPI---SHGKNIVREVNI 829
PE +K D++ +GV+ ELL G P SH + R V +
Sbjct: 189 PPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKV 236
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 65.5 bits (158), Expect = 1e-10, Method: Composition-based stats.
Identities = 69/246 (28%), Positives = 113/246 (45%), Gaps = 26/246 (10%)
Query: 639 KRAQEGSLQG--EKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQL 696
KR S +G +E E+ L ++ H N+++L + + +L+ E +S G L D L
Sbjct: 47 KRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL 106
Query: 697 SAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTA----KVA 752
+ KE L S G+ YLHT+ + H D+K NI+L K K+
Sbjct: 107 A--QKESLSEEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLI 161
Query: 753 DFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT 812
DFGL+ +IE V + GTP ++ PE L ++D++S+GV+ LL+
Sbjct: 162 DFGLAH-----EIEDGVEF---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 213
Query: 813 GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPS 872
G P ++ +A +S+ + D S+ SE + FI+ K ET R +
Sbjct: 214 GASPFLGD---TKQETLANITSVSYD-FDEEFFSHTSELAKDFIR---KLLVKETRKRLT 266
Query: 873 MSEVMR 878
+ E +R
Sbjct: 267 IQEALR 272
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 113/272 (41%), Gaps = 36/272 (13%)
Query: 616 QIGQGGYGKVYKGILP-------DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLV 668
++G G +G V KG + A + +L+ E L E + +L + +V
Sbjct: 376 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALK--DELLAEANVMQQLDNPYIV 433
Query: 669 SLVGYCDEEGEQMLVYEFMSNGTLRDQLS----AKSKEPLGFAMRLSIALGSSRGILYLH 724
++G C+ E MLV E G L L K K + ++S+ G+ YL
Sbjct: 434 RMIGICEAES-WMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSM------GMKYLE 486
Query: 725 TEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYL 784
+ HRD+ A N+LL + AK++DFGLS+ + H VK +
Sbjct: 487 ---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVK----WY 539
Query: 785 DPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 844
PE +K + KSDV+S GV+ E S+G+ R + + ++M+ G
Sbjct: 540 APECINYYKFSSKSDVWSFGVLMWEAF------SYGQKPYRGMKGSEVTAMLEK---GER 590
Query: 845 GSYPSECVEKFIKLALKCCQDETDARPSMSEV 876
P+ C + L C + + RP + V
Sbjct: 591 MGCPAGCPREMYDLMNLCWTYDVENRPGFAAV 622
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 65.1 bits (157), Expect = 2e-10, Method: Composition-based stats.
Identities = 53/185 (28%), Positives = 86/185 (46%), Gaps = 17/185 (9%)
Query: 652 FLTEIQFLSRLHHRNLVSLVGYCDEEGEQ----MLVYEFMSNGTLRDQLSAKSKEPLGFA 707
F E Q + L+H +V++ + E +V E++ TLRD + + P+
Sbjct: 76 FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG--PMTPK 133
Query: 708 MRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEG 767
+ + + + + + H + HRD+K +NI++ KV DFG++R + D
Sbjct: 134 RAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIAR--AIADSGN 188
Query: 768 IVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREV 827
V + V GT YL PE + +SDVYSLG V E+LTG P + V
Sbjct: 189 SVTQ--TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDS----PV 242
Query: 828 NIAYQ 832
++AYQ
Sbjct: 243 SVAYQ 247
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 104/216 (48%), Gaps = 18/216 (8%)
Query: 607 ATNNFN--SSTQI-GQGGYGKVYK-GILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL 662
A N+F S T+I G G +G+V+K G +A K + ++ ++E EI +++L
Sbjct: 84 AVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQL 143
Query: 663 HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILY 722
H NL+ L + + + +LV E++ G L D++ +S L + GI +
Sbjct: 144 DHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMK-QICEGIRH 202
Query: 723 LHTEADPPVFHRDIKASNILLDHKFTA--KVADFGLSRLAPVPDIEGIVPAHVSTVVKGT 780
+H + H D+K NIL ++ K+ DFGL+R P V GT
Sbjct: 203 MHQMY---ILHLDLKPENILCVNRDAKQIKIIDFGLARRYK--------PREKLKVNFGT 251
Query: 781 PGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQP 816
P +L PE ++ +D++S+GV+ LL+G+ P
Sbjct: 252 PEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSP 287
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 112/275 (40%), Gaps = 36/275 (13%)
Query: 609 NNFNSSTQIGQGGYGKV---YKGILPDGTVVAVKRAQEGSLQGE-KEFLTEIQFLSRLHH 664
++F IG+G +GKV K + Q+ + E + E+Q + L H
Sbjct: 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEH 74
Query: 665 RNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSA----KSKEPLGFAMRLSIALGSSRGI 720
LV+L +E + +V + + G LR L K + F L +AL
Sbjct: 75 PFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALD----- 129
Query: 721 LYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGT 780
YL + + HRD+K NILLD + DF ++ + P ++T+ GT
Sbjct: 130 -YLQNQR---IIHRDMKPDNILLDEHGHVHITDFNIAAMLP-------RETQITTMA-GT 177
Query: 781 PGYLDPEYFLTHKLTDKS---DVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMF 837
Y+ PE F + K S D +SLGV ELL G +P + + S +
Sbjct: 178 KPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPY--------HIRSSTSSKEIV 229
Query: 838 SVIDGNMGSYPSECVEKFIKLALKCCQDETDARPS 872
+ + +YPS ++ + L K + D R S
Sbjct: 230 HTFETTVVTYPSAWSQEMVSLLKKLLEPNPDQRFS 264
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 64.7 bits (156), Expect = 2e-10, Method: Composition-based stats.
Identities = 70/280 (25%), Positives = 116/280 (41%), Gaps = 36/280 (12%)
Query: 616 QIGQGGYGKVYKGILP-------DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLV 668
++G G +G V KG + A + +L+ E L E + +L + +V
Sbjct: 18 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALK--DELLAEANVMQQLDNPYIV 75
Query: 669 SLVGYCDEEGEQMLVYEFMSNGTLRDQLS----AKSKEPLGFAMRLSIALGSSRGILYLH 724
++G C+ E MLV E G L L K K + ++S+ G+ YL
Sbjct: 76 RMIGICEAE-SWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSM------GMKYLE 128
Query: 725 TEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYL 784
+ HRD+ A N+LL + AK++DFGLS+ + H VK +
Sbjct: 129 ---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVK----WY 181
Query: 785 DPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 844
PE +K + KSDV+S GV+ E S+G+ R + + ++M+ G
Sbjct: 182 APECINYYKFSSKSDVWSFGVLMWE------AFSYGQKPYRGMKGSEVTAMLEK---GER 232
Query: 845 GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIW 884
P+ C + L C + + RP + V L + +
Sbjct: 233 MGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYY 272
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 95/216 (43%), Gaps = 18/216 (8%)
Query: 608 TNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVK--RAQEGSLQGEKEFLTEIQFLSRLHH 664
T+ + ++G+G + V + + +P G A K ++ S + ++ E + L H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 665 RNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLH 724
N+V L EEG LV++ ++ G L + + A+ A + S +L+
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLN 122
Query: 725 TEADPPVFHRDIKASNILLDHK---FTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTP 781
+ HRD+K N+LL K K+ADFGL+ +++G A GTP
Sbjct: 123 G-----IVHRDLKPENLLLASKSKGAAVKLADFGLA-----IEVQGDQQAWFG--FAGTP 170
Query: 782 GYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPI 817
GYL PE D+++ GV+ LL G P
Sbjct: 171 GYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPF 206
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 64.3 bits (155), Expect = 3e-10, Method: Composition-based stats.
Identities = 53/185 (28%), Positives = 86/185 (46%), Gaps = 17/185 (9%)
Query: 652 FLTEIQFLSRLHHRNLVSLVGYCDEEGEQ----MLVYEFMSNGTLRDQLSAKSKEPLGFA 707
F E Q + L+H +V++ + E +V E++ TLRD + + P+
Sbjct: 59 FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG--PMTPK 116
Query: 708 MRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEG 767
+ + + + + + H + HRD+K +NI++ KV DFG++R + D
Sbjct: 117 RAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIAR--AIADSGN 171
Query: 768 IVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREV 827
V + V GT YL PE + +SDVYSLG V E+LTG P + V
Sbjct: 172 SVTQ--TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDS----PV 225
Query: 828 NIAYQ 832
++AYQ
Sbjct: 226 SVAYQ 230
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 95/215 (44%), Gaps = 18/215 (8%)
Query: 608 TNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVK--RAQEGSLQGEKEFLTEIQFLSRLHH 664
T+ + ++G+G + V + + +P G A K ++ S + ++ E + L H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 665 RNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLH 724
N+V L EEG LV++ ++ G L + + A+ A + S +L+
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLN 122
Query: 725 TEADPPVFHRDIKASNILLDHK---FTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTP 781
+ HRD+K N+LL K K+ADFGL+ +++G A GTP
Sbjct: 123 G-----IVHRDLKPENLLLASKSKGAAVKLADFGLA-----IEVQGDQQAWFG--FAGTP 170
Query: 782 GYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQP 816
GYL PE D+++ GV+ LL G P
Sbjct: 171 GYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPP 205
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 64.3 bits (155), Expect = 3e-10, Method: Composition-based stats.
Identities = 53/185 (28%), Positives = 86/185 (46%), Gaps = 17/185 (9%)
Query: 652 FLTEIQFLSRLHHRNLVSLVGYCDEEGEQ----MLVYEFMSNGTLRDQLSAKSKEPLGFA 707
F E Q + L+H +V++ + E +V E++ TLRD + + P+
Sbjct: 59 FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG--PMTPK 116
Query: 708 MRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEG 767
+ + + + + + H + HRD+K +NI++ KV DFG++R + D
Sbjct: 117 RAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIAR--AIADSGN 171
Query: 768 IVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREV 827
V + V GT YL PE + +SDVYSLG V E+LTG P + V
Sbjct: 172 SVTQ--TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDS----PV 225
Query: 828 NIAYQ 832
++AYQ
Sbjct: 226 SVAYQ 230
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 108/221 (48%), Gaps = 18/221 (8%)
Query: 616 QIGQGGYGKVYKGI--LPDGTVVAVKRAQEGSLQGEK-EFLTEIQFLSRLHHRNLVSLVG 672
++G+G Y VYKG L D +VA+K + +G + E+ L L H N+V+L
Sbjct: 9 KLGEGTYATVYKGKSKLTDN-LVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHD 67
Query: 673 YCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVF 732
E LV+E++ + L+ L ++L + RG+ Y H + V
Sbjct: 68 IIHTEKSLTLVFEYL-DKDLKQYLDDCGNIINMHNVKLFL-FQLLRGLAYCHRQK---VL 122
Query: 733 HRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFL-T 791
HRD+K N+L++ + K+ADFGL+R +P + + VV T Y P+ L +
Sbjct: 123 HRDLKPQNLLINERGELKLADFGLARAKSIP-----TKTYDNEVV--TLWYRPPDILLGS 175
Query: 792 HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQ 832
+ + D++ +G +F E+ TG +P+ G + +++ ++
Sbjct: 176 TDYSTQIDMWGVGCIFYEMATG-RPLFPGSTVEEQLHFIFR 215
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 64.3 bits (155), Expect = 3e-10, Method: Composition-based stats.
Identities = 70/280 (25%), Positives = 116/280 (41%), Gaps = 36/280 (12%)
Query: 616 QIGQGGYGKVYKGILP-------DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLV 668
++G G +G V KG + A + +L+ E L E + +L + +V
Sbjct: 12 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALK--DELLAEANVMQQLDNPYIV 69
Query: 669 SLVGYCDEEGEQMLVYEFMSNGTLRDQLS----AKSKEPLGFAMRLSIALGSSRGILYLH 724
++G C+ E MLV E G L L K K + ++S+ G+ YL
Sbjct: 70 RMIGICEAE-SWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSM------GMKYLE 122
Query: 725 TEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYL 784
+ HRD+ A N+LL + AK++DFGLS+ + H VK +
Sbjct: 123 ---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVK----WY 175
Query: 785 DPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 844
PE +K + KSDV+S GV+ E S+G+ R + + ++M+ G
Sbjct: 176 APECINYYKFSSKSDVWSFGVLMWE------AFSYGQKPYRGMKGSEVTAMLEK---GER 226
Query: 845 GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIW 884
P+ C + L C + + RP + V L + +
Sbjct: 227 MGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYY 266
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 64.3 bits (155), Expect = 3e-10, Method: Composition-based stats.
Identities = 70/280 (25%), Positives = 116/280 (41%), Gaps = 36/280 (12%)
Query: 616 QIGQGGYGKVYKGILP-------DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLV 668
++G G +G V KG + A + +L+ E L E + +L + +V
Sbjct: 14 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALK--DELLAEANVMQQLDNPYIV 71
Query: 669 SLVGYCDEEGEQMLVYEFMSNGTLRDQLS----AKSKEPLGFAMRLSIALGSSRGILYLH 724
++G C+ E MLV E G L L K K + ++S+ G+ YL
Sbjct: 72 RMIGICEAE-SWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSM------GMKYLE 124
Query: 725 TEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYL 784
+ HRD+ A N+LL + AK++DFGLS+ + H VK +
Sbjct: 125 ---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVK----WY 177
Query: 785 DPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 844
PE +K + KSDV+S GV+ E S+G+ R + + ++M+ G
Sbjct: 178 APECINYYKFSSKSDVWSFGVLMWE------AFSYGQKPYRGMKGSEVTAMLEK---GER 228
Query: 845 GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIW 884
P+ C + L C + + RP + V L + +
Sbjct: 229 MGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYY 268
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 64.3 bits (155), Expect = 3e-10, Method: Composition-based stats.
Identities = 70/280 (25%), Positives = 116/280 (41%), Gaps = 36/280 (12%)
Query: 616 QIGQGGYGKVYKGILP-------DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLV 668
++G G +G V KG + A + +L+ E L E + +L + +V
Sbjct: 24 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALK--DELLAEANVMQQLDNPYIV 81
Query: 669 SLVGYCDEEGEQMLVYEFMSNGTLRDQLS----AKSKEPLGFAMRLSIALGSSRGILYLH 724
++G C+ E MLV E G L L K K + ++S+ G+ YL
Sbjct: 82 RMIGICEAE-SWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSM------GMKYLE 134
Query: 725 TEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYL 784
+ HRD+ A N+LL + AK++DFGLS+ + H VK +
Sbjct: 135 ---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVK----WY 187
Query: 785 DPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 844
PE +K + KSDV+S GV+ E S+G+ R + + ++M+ G
Sbjct: 188 APECINYYKFSSKSDVWSFGVLMWE------AFSYGQKPYRGMKGSEVTAMLEK---GER 238
Query: 845 GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIW 884
P+ C + L C + + RP + V L + +
Sbjct: 239 MGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYY 278
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 64.3 bits (155), Expect = 3e-10, Method: Composition-based stats.
Identities = 70/280 (25%), Positives = 116/280 (41%), Gaps = 36/280 (12%)
Query: 616 QIGQGGYGKVYKGILP-------DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLV 668
++G G +G V KG + A + +L+ E L E + +L + +V
Sbjct: 18 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALK--DELLAEANVMQQLDNPYIV 75
Query: 669 SLVGYCDEEGEQMLVYEFMSNGTLRDQLS----AKSKEPLGFAMRLSIALGSSRGILYLH 724
++G C+ E MLV E G L L K K + ++S+ G+ YL
Sbjct: 76 RMIGICEAE-SWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSM------GMKYLE 128
Query: 725 TEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYL 784
+ HRD+ A N+LL + AK++DFGLS+ + H VK +
Sbjct: 129 ---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVK----WY 181
Query: 785 DPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 844
PE +K + KSDV+S GV+ E S+G+ R + + ++M+ G
Sbjct: 182 APECINYYKFSSKSDVWSFGVLMWE------AFSYGQKPYRGMKGSEVTAMLEK---GER 232
Query: 845 GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIW 884
P+ C + L C + + RP + V L + +
Sbjct: 233 MGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYY 272
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 98/232 (42%), Gaps = 21/232 (9%)
Query: 595 GVRSFTYGEMALAT---NNFNSSTQIGQGGYGKVYKGILPDGT---VVAVKRAQEGSLQG 648
G + + MA T +++ ++G+G + V + + T + ++ S +
Sbjct: 14 GTENLYFQXMATCTRFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARD 73
Query: 649 EKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAM 708
++ E + L H N+V L EEG LV++ ++ G L + + A+ A
Sbjct: 74 HQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADAS 133
Query: 709 RLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKF---TAKVADFGLSRLAPVPDI 765
+ S ++ H + HRD+K N+LL K K+ADFGL+ ++
Sbjct: 134 HCIHQILESVNHIHQHD-----IVHRDLKPENLLLASKCKGAAVKLADFGLA-----IEV 183
Query: 766 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPI 817
+G A GTPGYL PE D+++ GV+ LL G P
Sbjct: 184 QGEQQAWFG--FAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPPF 233
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 106/236 (44%), Gaps = 42/236 (17%)
Query: 610 NFNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLV 668
++ + IG G +G VY+ L D G +VA+K+ LQG+ E+Q + +L H N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQGKAFKNRELQIMRKLDHCNIV 76
Query: 669 SLVGYCDEEGEQM------LVYEFMSNGTLR-DQLSAKSKEPLGFAMRLSIALGSSRGIL 721
L + GE+ LV +++ R + +++K+ L R +
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 722 YLHTEADPPVFHRDIKASNILLDHKFTA-KVADFGLSRLAPVPDIEGIVPAHVSTVVKGT 780
Y+H+ + HRDIK N+LLD K+ DFG ++ +V+G
Sbjct: 137 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK----------------QLVRGE 177
Query: 781 P--GYLDPEYFLTHKL-------TDKSDVYSLGVVFLELLTGMQPISHGKNIVREV 827
P Y+ Y+ +L T DV+S G V ELL G QPI G + V ++
Sbjct: 178 PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFPGDSGVDQL 232
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 106/236 (44%), Gaps = 42/236 (17%)
Query: 610 NFNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLV 668
++ + IG G +G VY+ L D G +VA+K+ LQG+ E+Q + +L H N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQGKAFKNRELQIMRKLDHCNIV 76
Query: 669 SLVGYCDEEGEQM------LVYEFMSNGTLR-DQLSAKSKEPLGFAMRLSIALGSSRGIL 721
L + GE+ LV +++ R + +++K+ L R +
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 722 YLHTEADPPVFHRDIKASNILLDHKFTA-KVADFGLSRLAPVPDIEGIVPAHVSTVVKGT 780
Y+H+ + HRDIK N+LLD K+ DFG ++ +V+G
Sbjct: 137 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK----------------QLVRGE 177
Query: 781 P--GYLDPEYFLTHKL-------TDKSDVYSLGVVFLELLTGMQPISHGKNIVREV 827
P Y+ Y+ +L T DV+S G V ELL G QPI G + V ++
Sbjct: 178 PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFPGDSGVDQL 232
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 97/217 (44%), Gaps = 23/217 (10%)
Query: 608 TNNFNSSTQIGQGGYGKVY----KGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH 663
++ + ++G G YG+V K + + +K++ + L E+ L +L
Sbjct: 3 SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD 62
Query: 664 HRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSK-EPLGFAMRLSIALGSSRGILY 722
H N++ L + +++ LV E G L D++ + K + A+ + L G Y
Sbjct: 63 HPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLS---GTTY 119
Query: 723 LHTEADPPVFHRDIKASNILLDHK---FTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKG 779
LH + HRD+K N+LL+ K K+ DFGLS V G + + G
Sbjct: 120 LHKH---NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVG---GKMKERL-----G 168
Query: 780 TPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQP 816
T Y+ PE L K +K DV+S GV+ LL G P
Sbjct: 169 TAYYIAPE-VLRKKYDEKCDVWSCGVILYILLCGYPP 204
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 63.9 bits (154), Expect = 4e-10, Method: Composition-based stats.
Identities = 70/280 (25%), Positives = 116/280 (41%), Gaps = 36/280 (12%)
Query: 616 QIGQGGYGKVYKGILP-------DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLV 668
++G G +G V KG + A + +L+ E L E + +L + +V
Sbjct: 34 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALK--DELLAEANVMQQLDNPYIV 91
Query: 669 SLVGYCDEEGEQMLVYEFMSNGTLRDQLS----AKSKEPLGFAMRLSIALGSSRGILYLH 724
++G C+ E MLV E G L L K K + ++S+ G+ YL
Sbjct: 92 RMIGICEAE-SWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSM------GMKYLE 144
Query: 725 TEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYL 784
+ HRD+ A N+LL + AK++DFGLS+ + H VK +
Sbjct: 145 ---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVK----WY 197
Query: 785 DPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 844
PE +K + KSDV+S GV+ E S+G+ R + + ++M+ G
Sbjct: 198 APECINYYKFSSKSDVWSFGVLMWE------AFSYGQKPYRGMKGSEVTAMLEK---GER 248
Query: 845 GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIW 884
P+ C + L C + + RP + V L + +
Sbjct: 249 MGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYY 288
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 63.9 bits (154), Expect = 4e-10, Method: Composition-based stats.
Identities = 70/280 (25%), Positives = 116/280 (41%), Gaps = 36/280 (12%)
Query: 616 QIGQGGYGKVYKGILP-------DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLV 668
++G G +G V KG + A + +L+ E L E + +L + +V
Sbjct: 34 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALK--DELLAEANVMQQLDNPYIV 91
Query: 669 SLVGYCDEEGEQMLVYEFMSNGTLRDQLS----AKSKEPLGFAMRLSIALGSSRGILYLH 724
++G C+ E MLV E G L L K K + ++S+ G+ YL
Sbjct: 92 RMIGICEAE-SWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSM------GMKYLE 144
Query: 725 TEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYL 784
+ HRD+ A N+LL + AK++DFGLS+ + H VK +
Sbjct: 145 ---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVK----WY 197
Query: 785 DPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 844
PE +K + KSDV+S GV+ E S+G+ R + + ++M+ G
Sbjct: 198 APECINYYKFSSKSDVWSFGVLMWE------AFSYGQKPYRGMKGSEVTAMLEK---GER 248
Query: 845 GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIW 884
P+ C + L C + + RP + V L + +
Sbjct: 249 MGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYY 288
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 93/218 (42%), Gaps = 25/218 (11%)
Query: 608 TNNFNSSTQIGQGGYGKVYK------GILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSR 661
++N++ ++G+G + V + G+ ++ K+ Q + E + +
Sbjct: 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQ---KLEREARICRK 84
Query: 662 LHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGIL 721
L H N+V L EE LV++ ++ G L + + A+ A + S I
Sbjct: 85 LQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILES--IA 142
Query: 722 YLHTEADPPVFHRDIKASNILLDHKF---TAKVADFGLSRLAPVPDIEGIVPAHVSTVVK 778
Y H+ + HR++K N+LL K K+ADFGL+ V D E
Sbjct: 143 YCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAW------HGFA 191
Query: 779 GTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQP 816
GTPGYL PE + D+++ GV+ LL G P
Sbjct: 192 GTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 229
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 63.5 bits (153), Expect = 5e-10, Method: Composition-based stats.
Identities = 70/280 (25%), Positives = 116/280 (41%), Gaps = 36/280 (12%)
Query: 616 QIGQGGYGKVYKGILP-------DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLV 668
++G G +G V KG + A + +L+ E L E + +L + +V
Sbjct: 32 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALK--DELLAEANVMQQLDNPYIV 89
Query: 669 SLVGYCDEEGEQMLVYEFMSNGTLRDQLS----AKSKEPLGFAMRLSIALGSSRGILYLH 724
++G C+ E MLV E G L L K K + ++S+ G+ YL
Sbjct: 90 RMIGICEAE-SWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSM------GMKYLE 142
Query: 725 TEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYL 784
+ HRD+ A N+LL + AK++DFGLS+ + H VK +
Sbjct: 143 ---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVK----WY 195
Query: 785 DPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 844
PE +K + KSDV+S GV+ E S+G+ R + + ++M+ G
Sbjct: 196 APECINYYKFSSKSDVWSFGVLMWE------AFSYGQKPYRGMKGSEVTAMLEK---GER 246
Query: 845 GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIW 884
P+ C + L C + + RP + V L + +
Sbjct: 247 MGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYY 286
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 99/219 (45%), Gaps = 31/219 (14%)
Query: 608 TNNFNSSTQIGQGGYGKVY----KGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH 663
++ F +++G+G VY KG + +K+ + +K TEI L RL
Sbjct: 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVD-----KKIVRTEIGVLLRLS 106
Query: 664 HRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAK---SKEPLGFAMRLSIALGSSRGI 720
H N++ L + E LV E ++ G L D++ K S+ A++ + +
Sbjct: 107 HPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQIL-----EAV 161
Query: 721 LYLHTEADPPVFHRDIKASNILLDH---KFTAKVADFGLSRLAPVPDIEGIVPAHVSTVV 777
YLH + HRD+K N+L K+ADFGLS++ +E V + V
Sbjct: 162 AYLHENG---IVHRDLKPENLLYATPAPDAPLKIADFGLSKI-----VEHQV---LMKTV 210
Query: 778 KGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQP 816
GTPGY PE + D++S+G++ LL G +P
Sbjct: 211 CGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEP 249
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 123/263 (46%), Gaps = 41/263 (15%)
Query: 609 NNFNSSTQIGQGGYGKVYKGILPD--GT--VVAVKRAQEGSLQGEKEF---LTEIQFLSR 661
+FN +G+G +GKV +L D GT + A+K ++ + + + + E + L+
Sbjct: 19 TDFNFLMVLGKGSFGKV---MLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLAL 75
Query: 662 LHHRNLVSLVGYCDEEGEQM-LVYEFMSNGTL--RDQLSAKSKEPLG--FAMRLSIALGS 716
L ++ + C + +++ V E+++ G L Q K KEP +A +SI
Sbjct: 76 LDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISI---- 131
Query: 717 SRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTV 776
G+ +LH + +RD+K N++LD + K+ADFG+ + E ++ +
Sbjct: 132 --GLFFLHKRG---IIYRDLKLDNVMLDSEGHIKIADFGMCK-------EHMMDGVTTRE 179
Query: 777 VKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKN------IVREVNIA 830
GTP Y+ PE D ++ GV+ E+L G QP G++ + E N++
Sbjct: 180 FCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAG-QPPFDGEDEDELFQSIMEHNVS 238
Query: 831 YQSSM---MFSVIDGNMGSYPSE 850
Y S+ S+ G M +P++
Sbjct: 239 YPKSLSKEAVSICKGLMTKHPAK 261
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 28/168 (16%)
Query: 608 TNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKE-----FLTEIQFLSR 661
+ + +IGQG +G+V+K G VA+K+ ++ EKE L EI+ L
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKV---LMENEKEGFPITALREIKILQL 73
Query: 662 LHHRNLVSLVGYCDEE--------GEQMLVYEFMSN---GTLRDQLSAKSKEPLGFAMRL 710
L H N+V+L+ C + G LV++F + G L + L + + M++
Sbjct: 74 LKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQM 133
Query: 711 SIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSR 758
+ G+ Y+H + HRD+KA+N+L+ K+ADFGL+R
Sbjct: 134 LL-----NGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 28/168 (16%)
Query: 608 TNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKE-----FLTEIQFLSR 661
+ + +IGQG +G+V+K G VA+K+ ++ EKE L EI+ L
Sbjct: 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKV---LMENEKEGFPITALREIKILQL 72
Query: 662 LHHRNLVSLVGYCDEE--------GEQMLVYEFMSN---GTLRDQLSAKSKEPLGFAMRL 710
L H N+V+L+ C + G LV++F + G L + L + + M++
Sbjct: 73 LKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQM 132
Query: 711 SIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSR 758
+ G+ Y+H + HRD+KA+N+L+ K+ADFGL+R
Sbjct: 133 LL-----NGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLAR 172
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 28/168 (16%)
Query: 608 TNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKE-----FLTEIQFLSR 661
+ + +IGQG +G+V+K G VA+K+ ++ EKE L EI+ L
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKV---LMENEKEGFPITALREIKILQL 73
Query: 662 LHHRNLVSLVGYCDEE--------GEQMLVYEFMSN---GTLRDQLSAKSKEPLGFAMRL 710
L H N+V+L+ C + G LV++F + G L + L + + M++
Sbjct: 74 LKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQM 133
Query: 711 SIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSR 758
+ G+ Y+H + HRD+KA+N+L+ K+ADFGL+R
Sbjct: 134 LL-----NGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 102/212 (48%), Gaps = 29/212 (13%)
Query: 617 IGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFL--TEIQFLSRLHHRNLVSLVGY- 673
+G+G YG+V++G L G VAVK S + E+ + TEI L H N++ +
Sbjct: 16 VGKGRYGEVWRG-LWHGESVAVKIF---SSRDEQSWFRETEIYNTVLLRHDNILGFIASD 71
Query: 674 ---CDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLH-----T 725
+ + L+ + +G+L D L ++ EP A+RL+++ ++ G+ +LH T
Sbjct: 72 MTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEP-HLALRLAVS--AACGLAHLHVEIFGT 128
Query: 726 EADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVK-GTPGYL 784
+ P + HRD K+ N+L+ +AD GL+ V +G + + GT Y+
Sbjct: 129 QGKPAIAHRDFKSRNVLVKSNLQCCIADLGLA----VMHSQGSDYLDIGNNPRVGTKRYM 184
Query: 785 DPEYFLTHKLTD------KSDVYSLGVVFLEL 810
PE TD +D+++ G+V E+
Sbjct: 185 APEVLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 74/168 (44%), Gaps = 21/168 (12%)
Query: 664 HRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYL 723
H ++++L+ + LV++ M G L D L+ K L SI + +L
Sbjct: 159 HPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVA--LSEKETRSIMRSLLEAVSFL 216
Query: 724 HTEADPPVFHRDIKASNILLDHKFTAKVADFGLS-RLAPVPDIEGIVPAHVSTVVKGTPG 782
H + HRD+K NILLD +++DFG S L P + + GTPG
Sbjct: 217 HANN---IVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRELC---------GTPG 264
Query: 783 YLDPEYFL-----THKLTDKS-DVYSLGVVFLELLTGMQPISHGKNIV 824
YL PE TH K D+++ GV+ LL G P H + I+
Sbjct: 265 YLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQIL 312
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 113/246 (45%), Gaps = 26/246 (10%)
Query: 639 KRAQEGSLQG--EKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQL 696
KR S +G +E E+ L ++ H N+++L + + +L+ E +S G L D L
Sbjct: 47 KRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL 106
Query: 697 SAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFT----AKVA 752
+ KE L S G+ YLHT+ + H D+K NI+L K K+
Sbjct: 107 A--QKESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLI 161
Query: 753 DFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT 812
DFGL+ +IE V + GTP ++ PE L ++D++S+GV+ LL+
Sbjct: 162 DFGLAH-----EIEDGVEF---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 213
Query: 813 GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPS 872
G P ++ +A +S+ + D S+ SE + FI+ K ET R +
Sbjct: 214 GASPFLGD---TKQETLANITSVSYD-FDEEFFSHTSELAKDFIR---KLLVKETRKRLT 266
Query: 873 MSEVMR 878
+ E +R
Sbjct: 267 IQEALR 272
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 95/206 (46%), Gaps = 20/206 (9%)
Query: 617 IGQGGYGKVYKGILP-DGTVVAVK---RAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVG 672
+G G +GKV G G VAVK R + SL + EIQ L H +++ L
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 673 YCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVF 732
+ +V E++S G L D + + A RL + S+ + H V
Sbjct: 79 VISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHM-----VV 133
Query: 733 HRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH 792
HRD+K N+LLD AK+ADFGLS + + D E + + G+P Y PE ++
Sbjct: 134 HRDLKPENVLLDAHMNAKIADFGLSNM--MSDGEFLRTS------CGSPNYAAPE-VISG 184
Query: 793 KLTD--KSDVYSLGVVFLELLTGMQP 816
+L + D++S GV+ LL G P
Sbjct: 185 RLYAGPEVDIWSCGVILYALLCGTLP 210
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 111/283 (39%), Gaps = 75/283 (26%)
Query: 606 LATNNFNSSTQIGQGGYGKVY----KG---------------ILPDGTVVAVKRAQEGSL 646
+ +FN +G+G +GKV KG I D + + +L
Sbjct: 338 MKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLAL 397
Query: 647 QGEKEFLTEI----QFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTL--RDQLSAKS 700
G+ FLT++ Q + RL+ V E+++ G L Q +
Sbjct: 398 PGKPPFLTQLHSCFQTMDRLY------------------FVMEYVNGGDLMYHIQQVGRF 439
Query: 701 KEPLGFAMRLSIALG----SSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGL 756
KEP IA+G S+GI+Y RD+K N++LD + K+ADFG+
Sbjct: 440 KEPHAVFYAAEIAIGLFFLQSKGIIY-----------RDLKLDNVMLDSEGHIKIADFGM 488
Query: 757 SRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQP 816
+ E I + GTP Y+ PE D ++ GV+ E+L G P
Sbjct: 489 CK-------ENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAP 541
Query: 817 ISHGKN------IVREVNIAYQSSM---MFSVIDGNMGSYPSE 850
G++ + E N+AY SM ++ G M +P +
Sbjct: 542 FE-GEDEDELFQSIMEHNVAYPKSMSKEAVAICKGLMTKHPGK 583
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 63.2 bits (152), Expect = 7e-10, Method: Composition-based stats.
Identities = 59/215 (27%), Positives = 93/215 (43%), Gaps = 18/215 (8%)
Query: 608 TNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVK--RAQEGSLQGEKEFLTEIQFLSRLHH 664
T+ + IG+G + V + + L G A K ++ S + ++ E + L H
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 665 RNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLH 724
N+V L EEG LV++ ++ G L + + A+ A + +L+ H
Sbjct: 63 SNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQI--LEAVLHCH 120
Query: 725 TEADPPVFHRDIKASNILLDHK---FTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTP 781
V HRD+K N+LL K K+ADFGL+ +++G A GTP
Sbjct: 121 QMG---VVHRDLKPENLLLASKCKGAAVKLADFGLA-----IEVQGDQQAWFG--FAGTP 170
Query: 782 GYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQP 816
GYL PE D+++ GV+ LL G P
Sbjct: 171 GYLSPEVLRKEAYGKPVDIWACGVILYILLVGYPP 205
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 111/269 (41%), Gaps = 35/269 (13%)
Query: 617 IGQGGYGKVYKGILPDGTVVAVKRAQEGSL-----QGEKEFLTEIQFLSRLHHRNLVSLV 671
+G+GG+ K ++ D V + SL Q EK + EI L H+++V
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSM-EISIHRSLAHQHVVGFH 107
Query: 672 GYCDEEGEQMLVYEFMSNGTLRDQLSAKSK---EPLGFAMRLSIALGSSRGILYLHTEAD 728
G+ ++ +V E +L +L + K EP I LG YLH
Sbjct: 108 GFFEDNDFVFVVLELCRRRSLL-ELHKRRKALTEPEARYYLRQIVLGCQ----YLHRNR- 161
Query: 729 PPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEY 788
V HRD+K N+ L+ K+ DFGL+ + +G V+ GTP Y+ PE
Sbjct: 162 --VIHRDLKLGNLFLNEDLEVKIGDFGLATKV---EYDG----ERKKVLCGTPNYIAPEV 212
Query: 789 FLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYP 848
+ + DV+S+G + LL G P + ++E + I N S P
Sbjct: 213 LSKKGHSFEVDVWSIGCIMYTLLVGKPPFE--TSCLKETYLR---------IKKNEYSIP 261
Query: 849 SECVEKFIKLALKCCQDETDARPSMSEVM 877
L K Q + ARP+++E++
Sbjct: 262 KHINPVAASLIQKMLQTDPTARPTINELL 290
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 102/231 (44%), Gaps = 32/231 (13%)
Query: 595 GVRSFTYGEMALATNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKE-- 651
G S + A + + + T++G+G YG+VYK I VA+KR + L+ E+E
Sbjct: 20 GSMSVSAAPSATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIR---LEHEEEGV 76
Query: 652 ---FLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAM 708
+ E+ L L HRN++ L L++E+ N D K P +M
Sbjct: 77 PGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAEN----DLKKYMDKNP-DVSM 131
Query: 709 RL--SIALGSSRGILYLHTEADPPVFHRDIKASNILL---DHKFTA--KVADFGLSRLAP 761
R+ S G+ + H+ HRD+K N+LL D T K+ DFGL+R
Sbjct: 132 RVIKSFLYQLINGVNFCHSRR---CLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFG 188
Query: 762 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKS-DVYSLGVVFLELL 811
+P + ++ T Y PE L + S D++S+ ++ E+L
Sbjct: 189 IP-----IRQFTHEII--TLWYRPPEILLGSRHYSTSVDIWSIACIWAEML 232
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 95/206 (46%), Gaps = 20/206 (9%)
Query: 617 IGQGGYGKVYKGILP-DGTVVAVK---RAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVG 672
+G G +GKV G G VAVK R + SL + EIQ L H +++ L
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 673 YCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVF 732
+ +V E++S G L D + + A RL + S+ + H V
Sbjct: 79 VISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHM-----VV 133
Query: 733 HRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH 792
HRD+K N+LLD AK+ADFGLS + + D E + + G+P Y PE ++
Sbjct: 134 HRDLKPENVLLDAHMNAKIADFGLSNM--MSDGEFLRDS------CGSPNYAAPE-VISG 184
Query: 793 KLTD--KSDVYSLGVVFLELLTGMQP 816
+L + D++S GV+ LL G P
Sbjct: 185 RLYAGPEVDIWSCGVILYALLCGTLP 210
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 111/269 (41%), Gaps = 35/269 (13%)
Query: 617 IGQGGYGKVYKGILPDGTVVAVKRAQEGSL-----QGEKEFLTEIQFLSRLHHRNLVSLV 671
+G+GG+ K ++ D V + SL Q EK + EI L H+++V
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSM-EISIHRSLAHQHVVGFH 105
Query: 672 GYCDEEGEQMLVYEFMSNGTLRDQLSAKSK---EPLGFAMRLSIALGSSRGILYLHTEAD 728
G+ ++ +V E +L +L + K EP I LG YLH
Sbjct: 106 GFFEDNDFVFVVLELCRRRSLL-ELHKRRKALTEPEARYYLRQIVLGCQ----YLHRNR- 159
Query: 729 PPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEY 788
V HRD+K N+ L+ K+ DFGL+ + +G V+ GTP Y+ PE
Sbjct: 160 --VIHRDLKLGNLFLNEDLEVKIGDFGLATKV---EYDG----ERKKVLCGTPNYIAPEV 210
Query: 789 FLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYP 848
+ + DV+S+G + LL G P + ++E + I N S P
Sbjct: 211 LSKKGHSFEVDVWSIGCIMYTLLVGKPPFE--TSCLKETYLR---------IKKNEYSIP 259
Query: 849 SECVEKFIKLALKCCQDETDARPSMSEVM 877
L K Q + ARP+++E++
Sbjct: 260 KHINPVAASLIQKMLQTDPTARPTINELL 288
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 104/236 (44%), Gaps = 42/236 (17%)
Query: 610 NFNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLV 668
++ + IG G +G VY+ L D G +VA+K+ LQG+ E+Q + +L H N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQGKAFKNRELQIMRKLDHCNIV 76
Query: 669 SLVGYCDEEGEQM------LVYEFMSNGTLR-DQLSAKSKEPLGFAMRLSIALGSSRGIL 721
L + GE+ LV +++ R + +++K+ L R +
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 722 YLHTEADPPVFHRDIKASNILLDHKFTA-KVADFGLSRLAPVPDIEGIVPAHVSTVVKGT 780
Y+H+ + HRDIK N+LLD K+ DFG ++ +V+G
Sbjct: 137 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK----------------QLVRGE 177
Query: 781 PG--------YLDPEY-FLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREV 827
P Y PE F T DV+S G V ELL G QPI G + V ++
Sbjct: 178 PNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFPGDSGVDQL 232
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 113/246 (45%), Gaps = 26/246 (10%)
Query: 639 KRAQEGSLQG--EKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQL 696
KR S +G +E E+ L ++ H N+++L + + +L+ E +S G L D L
Sbjct: 47 KRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL 106
Query: 697 SAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFT----AKVA 752
+ KE L S G+ YLHT+ + H D+K NI+L K K+
Sbjct: 107 A--QKESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLI 161
Query: 753 DFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT 812
DFGL+ +IE V + GTP ++ PE L ++D++S+GV+ LL+
Sbjct: 162 DFGLAH-----EIEDGVEF---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 213
Query: 813 GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPS 872
G P ++ +A +S+ + D S+ SE + FI+ K ET R +
Sbjct: 214 GASPFLGD---TKQETLANITSVSYD-FDEEFFSHTSELAKDFIR---KLLVKETRKRLT 266
Query: 873 MSEVMR 878
+ E +R
Sbjct: 267 IQEALR 272
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 106/236 (44%), Gaps = 42/236 (17%)
Query: 610 NFNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLV 668
++ + IG G +G VY+ L D G +VA+K+ LQ ++ E+Q + +L H N+V
Sbjct: 34 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 89
Query: 669 SLVGYCDEEGEQM------LVYEFMSNGTLR-DQLSAKSKEPLGFAMRLSIALGSSRGIL 721
L + GE+ LV +++ R + +++K+ L R +
Sbjct: 90 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 149
Query: 722 YLHTEADPPVFHRDIKASNILLDHKFTA-KVADFGLSRLAPVPDIEGIVPAHVSTVVKGT 780
Y+H+ + HRDIK N+LLD K+ DFG ++ +V+G
Sbjct: 150 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK----------------QLVRGE 190
Query: 781 P--GYLDPEYFLTHKL-------TDKSDVYSLGVVFLELLTGMQPISHGKNIVREV 827
P Y+ Y+ +L T DV+S G V ELL G QPI G + V ++
Sbjct: 191 PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFPGDSGVDQL 245
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 62.8 bits (151), Expect = 1e-09, Method: Composition-based stats.
Identities = 49/171 (28%), Positives = 80/171 (46%), Gaps = 13/171 (7%)
Query: 652 FLTEIQFLSRLHHRNLVSLVGYCDEEGEQ----MLVYEFMSNGTLRDQLSAKSKEPLGFA 707
F E Q + L+H +V++ + E +V E++ TLRD + + P+
Sbjct: 59 FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG--PMTPK 116
Query: 708 MRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEG 767
+ + + + + + H + HRD+K +NI++ KV DFG++R + D
Sbjct: 117 RAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIAR--AIADSGN 171
Query: 768 IVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPIS 818
V + V GT YL PE + +SDVYSLG V E+LTG P +
Sbjct: 172 SVTQ--TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFT 220
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 106/236 (44%), Gaps = 42/236 (17%)
Query: 610 NFNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLV 668
++ + IG G +G VY+ L D G +VA+K+ LQ ++ E+Q + +L H N+V
Sbjct: 26 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 81
Query: 669 SLVGYCDEEGEQM------LVYEFMSNGTLR-DQLSAKSKEPLGFAMRLSIALGSSRGIL 721
L + GE+ LV +++ R + +++K+ L R +
Sbjct: 82 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 141
Query: 722 YLHTEADPPVFHRDIKASNILLDHKFTA-KVADFGLSRLAPVPDIEGIVPAHVSTVVKGT 780
Y+H+ + HRDIK N+LLD K+ DFG ++ +V+G
Sbjct: 142 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK----------------QLVRGE 182
Query: 781 P--GYLDPEYFLTHKL-------TDKSDVYSLGVVFLELLTGMQPISHGKNIVREV 827
P Y+ Y+ +L T DV+S G V ELL G QPI G + V ++
Sbjct: 183 PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFPGDSGVDQL 237
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 106/236 (44%), Gaps = 42/236 (17%)
Query: 610 NFNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLV 668
++ + IG G +G VY+ L D G +VA+K+ LQ ++ E+Q + +L H N+V
Sbjct: 57 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 112
Query: 669 SLVGYCDEEGEQM------LVYEFMSNGTLR-DQLSAKSKEPLGFAMRLSIALGSSRGIL 721
L + GE+ LV +++ R + +++K+ L R +
Sbjct: 113 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 172
Query: 722 YLHTEADPPVFHRDIKASNILLDHKFTA-KVADFGLSRLAPVPDIEGIVPAHVSTVVKGT 780
Y+H+ + HRDIK N+LLD K+ DFG ++ +V+G
Sbjct: 173 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK----------------QLVRGE 213
Query: 781 P--GYLDPEYFLTHKL-------TDKSDVYSLGVVFLELLTGMQPISHGKNIVREV 827
P Y+ Y+ +L T DV+S G V ELL G QPI G + V ++
Sbjct: 214 PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFPGDSGVDQL 268
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 106/236 (44%), Gaps = 42/236 (17%)
Query: 610 NFNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLV 668
++ + IG G +G VY+ L D G +VA+K+ LQ ++ E+Q + +L H N+V
Sbjct: 49 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 104
Query: 669 SLVGYCDEEGEQM------LVYEFMSNGTLR-DQLSAKSKEPLGFAMRLSIALGSSRGIL 721
L + GE+ LV +++ R + +++K+ L R +
Sbjct: 105 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 164
Query: 722 YLHTEADPPVFHRDIKASNILLDHKFTA-KVADFGLSRLAPVPDIEGIVPAHVSTVVKGT 780
Y+H+ + HRDIK N+LLD K+ DFG ++ +V+G
Sbjct: 165 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK----------------QLVRGE 205
Query: 781 P--GYLDPEYFLTHKL-------TDKSDVYSLGVVFLELLTGMQPISHGKNIVREV 827
P Y+ Y+ +L T DV+S G V ELL G QPI G + V ++
Sbjct: 206 PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFPGDSGVDQL 260
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 102/214 (47%), Gaps = 17/214 (7%)
Query: 617 IGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQ---GEKEFLTEIQFLSRLHHRNLVSLVG 672
+G+GG+G+V+ + G + A K+ + L+ G + + E + L+++H R +VSL
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 673 YCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSS--RGILYLHTEADPP 730
+ + + LV M+ G +R + ++ GF +I + G+ +LH
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN--- 309
Query: 731 VFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFL 790
+ +RD+K N+LLD +++D GL+ +E + GTPG++ PE L
Sbjct: 310 IIYRDLKPENVLLDDDGNVRISDLGLA-------VELKAGQTKTKGYAGTPGFMAPELLL 362
Query: 791 THKLTDKSDVYSLGVVFLELLTGMQPI-SHGKNI 823
+ D ++LGV E++ P + G+ +
Sbjct: 363 GEEYDFSVDYFALGVTLYEMIAARGPFRARGEKV 396
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 106/236 (44%), Gaps = 42/236 (17%)
Query: 610 NFNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLV 668
++ + IG G +G VY+ L D G +VA+K+ LQ ++ E+Q + +L H N+V
Sbjct: 59 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 114
Query: 669 SLVGYCDEEGEQM------LVYEFMSNGTLR-DQLSAKSKEPLGFAMRLSIALGSSRGIL 721
L + GE+ LV +++ R + +++K+ L R +
Sbjct: 115 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 174
Query: 722 YLHTEADPPVFHRDIKASNILLDHKFTA-KVADFGLSRLAPVPDIEGIVPAHVSTVVKGT 780
Y+H+ + HRDIK N+LLD K+ DFG ++ +V+G
Sbjct: 175 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK----------------QLVRGE 215
Query: 781 P--GYLDPEYFLTHKL-------TDKSDVYSLGVVFLELLTGMQPISHGKNIVREV 827
P Y+ Y+ +L T DV+S G V ELL G QPI G + V ++
Sbjct: 216 PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFPGDSGVDQL 270
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 102/214 (47%), Gaps = 17/214 (7%)
Query: 617 IGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQ---GEKEFLTEIQFLSRLHHRNLVSLVG 672
+G+GG+G+V+ + G + A K+ + L+ G + + E + L+++H R +VSL
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 673 YCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSS--RGILYLHTEADPP 730
+ + + LV M+ G +R + ++ GF +I + G+ +LH
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN--- 309
Query: 731 VFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFL 790
+ +RD+K N+LLD +++D GL+ +E + GTPG++ PE L
Sbjct: 310 IIYRDLKPENVLLDDDGNVRISDLGLA-------VELKAGQTKTKGYAGTPGFMAPELLL 362
Query: 791 THKLTDKSDVYSLGVVFLELLTGMQPI-SHGKNI 823
+ D ++LGV E++ P + G+ +
Sbjct: 363 GEEYDFSVDYFALGVTLYEMIAARGPFRARGEKV 396
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 106/236 (44%), Gaps = 42/236 (17%)
Query: 610 NFNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLV 668
++ + IG G +G VY+ L D G +VA+K+ LQ ++ E+Q + +L H N+V
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 110
Query: 669 SLVGYCDEEGEQM------LVYEFMSNGTLR-DQLSAKSKEPLGFAMRLSIALGSSRGIL 721
L + GE+ LV +++ R + +++K+ L R +
Sbjct: 111 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 170
Query: 722 YLHTEADPPVFHRDIKASNILLDHKFTA-KVADFGLSRLAPVPDIEGIVPAHVSTVVKGT 780
Y+H+ + HRDIK N+LLD K+ DFG ++ +V+G
Sbjct: 171 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK----------------QLVRGE 211
Query: 781 P--GYLDPEYFLTHKL-------TDKSDVYSLGVVFLELLTGMQPISHGKNIVREV 827
P Y+ Y+ +L T DV+S G V ELL G QPI G + V ++
Sbjct: 212 PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFPGDSGVDQL 266
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 106/236 (44%), Gaps = 42/236 (17%)
Query: 610 NFNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLV 668
++ + IG G +G VY+ L D G +VA+K+ LQ ++ E+Q + +L H N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 76
Query: 669 SLVGYCDEEGEQM------LVYEFMSNGTLR-DQLSAKSKEPLGFAMRLSIALGSSRGIL 721
L + GE+ LV +++ R + +++K+ L R +
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 722 YLHTEADPPVFHRDIKASNILLDHKFTA-KVADFGLSRLAPVPDIEGIVPAHVSTVVKGT 780
Y+H+ + HRDIK N+LLD K+ DFG ++ +V+G
Sbjct: 137 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK----------------QLVRGE 177
Query: 781 P--GYLDPEYFLTHKL-------TDKSDVYSLGVVFLELLTGMQPISHGKNIVREV 827
P Y+ Y+ +L T DV+S G V ELL G QPI G + V ++
Sbjct: 178 PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFPGDSGVDQL 232
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 102/214 (47%), Gaps = 17/214 (7%)
Query: 617 IGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQ---GEKEFLTEIQFLSRLHHRNLVSLVG 672
+G+GG+G+V+ + G + A K+ + L+ G + + E + L+++H R +VSL
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 673 YCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSS--RGILYLHTEADPP 730
+ + + LV M+ G +R + ++ GF +I + G+ +LH
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN--- 309
Query: 731 VFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFL 790
+ +RD+K N+LLD +++D GL+ +E + GTPG++ PE L
Sbjct: 310 IIYRDLKPENVLLDDDGNVRISDLGLA-------VELKAGQTKTKGYAGTPGFMAPELLL 362
Query: 791 THKLTDKSDVYSLGVVFLELLTGMQPI-SHGKNI 823
+ D ++LGV E++ P + G+ +
Sbjct: 363 GEEYDFSVDYFALGVTLYEMIAARGPFRARGEKV 396
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 102/214 (47%), Gaps = 17/214 (7%)
Query: 617 IGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQ---GEKEFLTEIQFLSRLHHRNLVSLVG 672
+G+GG+G+V+ + G + A K+ + L+ G + + E + L+++H R +VSL
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 673 YCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSS--RGILYLHTEADPP 730
+ + + LV M+ G +R + ++ GF +I + G+ +LH
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN--- 309
Query: 731 VFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFL 790
+ +RD+K N+LLD +++D GL+ +E + GTPG++ PE L
Sbjct: 310 IIYRDLKPENVLLDDDGNVRISDLGLA-------VELKAGQTKTKGYAGTPGFMAPELLL 362
Query: 791 THKLTDKSDVYSLGVVFLELLTGMQPI-SHGKNI 823
+ D ++LGV E++ P + G+ +
Sbjct: 363 GEEYDFSVDYFALGVTLYEMIAARGPFRARGEKV 396
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 108/282 (38%), Gaps = 73/282 (25%)
Query: 606 LATNNFNSSTQIGQGGYGKVY----KG---------------ILPDGTVVAVKRAQEGSL 646
+ +FN +G+G +GKV KG I D + + +L
Sbjct: 17 MKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLAL 76
Query: 647 QGEKEFLTEI----QFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTL--RDQLSAKS 700
G+ FLT++ Q + RL+ V E+++ G L Q +
Sbjct: 77 PGKPPFLTQLHSCFQTMDRLY------------------FVMEYVNGGDLMYHIQQVGRF 118
Query: 701 KEPLGFAMRLSIALG----SSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGL 756
KEP IA+G S+GI+Y RD+K N++LD + K+ADFG+
Sbjct: 119 KEPHAVFYAAEIAIGLFFLQSKGIIY-----------RDLKLDNVMLDSEGHIKIADFGM 167
Query: 757 SRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQP 816
+ E I + GTP Y+ PE D ++ GV+ E+L G P
Sbjct: 168 CK-------ENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAP 220
Query: 817 ISHGK-----NIVREVNIAYQSSM---MFSVIDGNMGSYPSE 850
+ E N+AY SM ++ G M +P +
Sbjct: 221 FEGEDEDELFQSIMEHNVAYPKSMSKEAVAICKGLMTKHPGK 262
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 113/255 (44%), Gaps = 42/255 (16%)
Query: 608 TNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHH-- 664
++F +GQG +G+V K D A+K+ + + L+E+ L+ L+H
Sbjct: 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE-EKLSTILSEVMLLASLNHQY 63
Query: 665 -----------RNLVSLVGYCDEEGEQMLVYEFMSNGTLRD-----QLSAKSKEPLGFAM 708
RN V + ++ + E+ NGTL D L+ + E
Sbjct: 64 VVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFR 123
Query: 709 RLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSR-LAPVPDIEG 767
++ AL Y+H++ + HRD+K NI +D K+ DFGL++ + DI
Sbjct: 124 QILEALS------YIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILK 174
Query: 768 IVPAHVS------TVVKGTPGYLDPEYFL-THKLTDKSDVYSLGVVFLELL----TGMQP 816
+ ++ T GT Y+ E T +K D+YSLG++F E++ TGM+
Sbjct: 175 LDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFSTGMER 234
Query: 817 ISHGKNIVREVNIAY 831
++ K + R V+I +
Sbjct: 235 VNILKKL-RSVSIEF 248
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 99/236 (41%), Gaps = 36/236 (15%)
Query: 654 TEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQL--SAKSKEPLGFAMRLS 711
TEI+ L +L+H ++ + + D E + +V E M G L D++ + + KE
Sbjct: 203 TEIEILKKLNHPCIIKIKNFFDAE-DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 261
Query: 712 IALGSSRGILYLHTEADPPVFHRDIKASNILL---DHKFTAKVADFGLSRLAPVPDIEGI 768
+ L + YLH + HRD+K N+LL + K+ DFG S++ +
Sbjct: 262 MLL----AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--------L 306
Query: 769 VPAHVSTVVKGTPGYLDPEYFL---THKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVR 825
+ + GTP YL PE + T D +SLGV+ L+G P S +
Sbjct: 307 GETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT--- 363
Query: 826 EVNIAYQSSMMFSVIDGNMGSYP---SECVEKFIKLALKCCQDETDARPSMSEVMR 878
Q S+ + G P +E EK + L K + AR + E +R
Sbjct: 364 ------QVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 413
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 106/236 (44%), Gaps = 42/236 (17%)
Query: 610 NFNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLV 668
++ + IG G +G VY+ L D G +VA+K+ LQ ++ E+Q + +L H N+V
Sbjct: 100 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 155
Query: 669 SLVGYCDEEGEQM------LVYEFMSNGTLR-DQLSAKSKEPLGFAMRLSIALGSSRGIL 721
L + GE+ LV +++ R + +++K+ L R +
Sbjct: 156 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 215
Query: 722 YLHTEADPPVFHRDIKASNILLDHKFTA-KVADFGLSRLAPVPDIEGIVPAHVSTVVKGT 780
Y+H+ + HRDIK N+LLD K+ DFG ++ +V+G
Sbjct: 216 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK----------------QLVRGE 256
Query: 781 P--GYLDPEYFLTHKL-------TDKSDVYSLGVVFLELLTGMQPISHGKNIVREV 827
P Y+ Y+ +L T DV+S G V ELL G QPI G + V ++
Sbjct: 257 PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFPGDSGVDQL 311
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 99/236 (41%), Gaps = 36/236 (15%)
Query: 654 TEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQL--SAKSKEPLGFAMRLS 711
TEI+ L +L+H ++ + + D E + +V E M G L D++ + + KE
Sbjct: 189 TEIEILKKLNHPCIIKIKNFFDAE-DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 247
Query: 712 IALGSSRGILYLHTEADPPVFHRDIKASNILL---DHKFTAKVADFGLSRLAPVPDIEGI 768
+ L + YLH + HRD+K N+LL + K+ DFG S++ +
Sbjct: 248 MLL----AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--------L 292
Query: 769 VPAHVSTVVKGTPGYLDPEYFL---THKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVR 825
+ + GTP YL PE + T D +SLGV+ L+G P S +
Sbjct: 293 GETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT--- 349
Query: 826 EVNIAYQSSMMFSVIDGNMGSYP---SECVEKFIKLALKCCQDETDARPSMSEVMR 878
Q S+ + G P +E EK + L K + AR + E +R
Sbjct: 350 ------QVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 399
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 93/206 (45%), Gaps = 20/206 (9%)
Query: 617 IGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGE-KEFLTEIQFLSRLHHRNLVSLVGYC 674
IG GG+ KV + G +VA+K + +L + TEI+ L L H+++ L
Sbjct: 18 IGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVL 77
Query: 675 DEEGEQMLVYEFMSNGTLRDQLSAK---SKEPLGFAMRLSIALGSSRGILYLHTEADPPV 731
+ + +V E+ G L D + ++ S+E R ++ + Y+H++
Sbjct: 78 ETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVS-----AVAYVHSQG---Y 129
Query: 732 FHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT 791
HRD+K N+L D K+ DFGL +G H+ T G+ Y PE
Sbjct: 130 AHRDLKPENLLFDEYHKLKLIDFGLC-----AKPKGNKDYHLQTCC-GSLAYAAPELIQG 183
Query: 792 HK-LTDKSDVYSLGVVFLELLTGMQP 816
L ++DV+S+G++ L+ G P
Sbjct: 184 KSYLGSEADVWSMGILLYVLMCGFLP 209
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 104/236 (44%), Gaps = 42/236 (17%)
Query: 610 NFNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLV 668
++ + IG G +G VY+ L D G +VA+K+ LQ ++ E+Q + +L H N+V
Sbjct: 29 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 84
Query: 669 SLVGYCDEEGEQM------LVYEFMSNGTLR-DQLSAKSKEPLGFAMRLSIALGSSRGIL 721
L + GE+ LV +++ R + +++K+ L R +
Sbjct: 85 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 144
Query: 722 YLHTEADPPVFHRDIKASNILLDHKFTA-KVADFGLSRLAPVPDIEGIVPAHVSTVVKGT 780
Y+H+ + HRDIK N+LLD K+ DFG ++ +V+G
Sbjct: 145 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK----------------QLVRGE 185
Query: 781 PG--------YLDPEY-FLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREV 827
P Y PE F T DV+S G V ELL G QPI G + V ++
Sbjct: 186 PNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFPGDSGVDQL 240
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 104/236 (44%), Gaps = 42/236 (17%)
Query: 610 NFNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLV 668
++ + IG G +G VY+ L D G +VA+K+ LQ ++ E+Q + +L H N+V
Sbjct: 40 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 95
Query: 669 SLVGYCDEEGEQM------LVYEFMSNGTLR-DQLSAKSKEPLGFAMRLSIALGSSRGIL 721
L + GE+ LV +++ R + +++K+ L R +
Sbjct: 96 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 155
Query: 722 YLHTEADPPVFHRDIKASNILLDHKFTA-KVADFGLSRLAPVPDIEGIVPAHVSTVVKGT 780
Y+H+ + HRDIK N+LLD K+ DFG ++ +V+G
Sbjct: 156 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK----------------QLVRGE 196
Query: 781 PG--------YLDPEY-FLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREV 827
P Y PE F T DV+S G V ELL G QPI G + V ++
Sbjct: 197 PNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFPGDSGVDQL 251
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 92/218 (42%), Gaps = 24/218 (11%)
Query: 608 TNNFNSSTQIGQGGYG------KVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSR 661
T + ++G+G + KV G ++ K+ S + ++ E +
Sbjct: 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKL---SARDHQKLEREARICRL 66
Query: 662 LHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGIL 721
L H N+V L EEG L+++ ++ G L + + A+ A + + +L
Sbjct: 67 LKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEA--VL 124
Query: 722 YLHTEADPPVFHRDIKASNILLDHKF---TAKVADFGLSRLAPVPDIEGIVPAHVSTVVK 778
+ H V HR++K N+LL K K+ADFGL+ ++EG A
Sbjct: 125 HCHQMG---VVHRNLKPENLLLASKLKGAAVKLADFGLA-----IEVEGEQQAWFG--FA 174
Query: 779 GTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQP 816
GTPGYL PE D+++ GV+ LL G P
Sbjct: 175 GTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPP 212
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 104/236 (44%), Gaps = 42/236 (17%)
Query: 610 NFNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLV 668
++ + IG G +G VY+ L D G +VA+K+ LQ ++ E+Q + +L H N+V
Sbjct: 22 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 77
Query: 669 SLVGYCDEEGEQM------LVYEFMSNGTLR-DQLSAKSKEPLGFAMRLSIALGSSRGIL 721
L + GE+ LV +++ R + +++K+ L R +
Sbjct: 78 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 137
Query: 722 YLHTEADPPVFHRDIKASNILLDHKFTA-KVADFGLSRLAPVPDIEGIVPAHVSTVVKGT 780
Y+H+ + HRDIK N+LLD K+ DFG ++ +V+G
Sbjct: 138 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK----------------QLVRGE 178
Query: 781 PG--------YLDPEY-FLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREV 827
P Y PE F T DV+S G V ELL G QPI G + V ++
Sbjct: 179 PNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFPGDSGVDQL 233
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 87/207 (42%), Gaps = 14/207 (6%)
Query: 611 FNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVS 669
+S +IG+G G V G VAVK Q + E+ + H N+V
Sbjct: 47 LDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVE 106
Query: 670 LVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADP 729
+ E ++ EF+ G L D +S A ++ + + YLH +
Sbjct: 107 MYKSYLVGEELWVLMEFLQGGALTDIVSQVRLNEEQIA---TVCEAVLQALAYLHAQG-- 161
Query: 730 PVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYF 789
V HRDIK+ +ILL K++DFG I VP V GTP ++ PE
Sbjct: 162 -VIHRDIKSDSILLTLDGRVKLSDFGFC-----AQISKDVPKRKXLV--GTPYWMAPEVI 213
Query: 790 LTHKLTDKSDVYSLGVVFLELLTGMQP 816
+ D++SLG++ +E++ G P
Sbjct: 214 SRSLYATEVDIWSLGIMVIEMVDGEPP 240
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 125/287 (43%), Gaps = 38/287 (13%)
Query: 606 LATNNFNSSTQIGQGGYGKVYK-GILPDGTVVAVKRAQEG-SLQGEKEFLTEIQFLSR-L 662
+ ++ ++G+G YG V K +P G ++AVKR + + Q +K L ++ R +
Sbjct: 48 VKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTV 107
Query: 663 HHRNLVSLVGYCDEEGEQMLVYEFMSNG------TLRDQLSAKSKEPLGFAMRLSIALGS 716
V+ G EG+ + E M + D+ ++ LG IA+
Sbjct: 108 DCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILG-----KIAVSI 162
Query: 717 SRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTV 776
+ + +LH++ V HRD+K SN+L++ K+ DFG+S +V + T+
Sbjct: 163 VKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGY--------LVDSVAKTI 212
Query: 777 VKGTPGYLDPEYF---LTHK-LTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQ 832
G Y+ PE L K + KSD++SLG+ +EL P +++
Sbjct: 213 DAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLK---- 268
Query: 833 SSMMFSVIDGNMGSYPSECVE-KFIKLALKCCQDETDARPSMSEVMR 878
V++ P++ +F+ +C + + RP+ E+M+
Sbjct: 269 -----QVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 310
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 104/236 (44%), Gaps = 42/236 (17%)
Query: 610 NFNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLV 668
++ + IG G +G VY+ L D G +VA+K+ LQ ++ E+Q + +L H N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 76
Query: 669 SLVGYCDEEGEQM------LVYEFMSNGTLR-DQLSAKSKEPLGFAMRLSIALGSSRGIL 721
L + GE+ LV +++ R + +++K+ L R +
Sbjct: 77 RLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 722 YLHTEADPPVFHRDIKASNILLDHKFTA-KVADFGLSRLAPVPDIEGIVPAHVSTVVKGT 780
Y+H+ + HRDIK N+LLD K+ DFG ++ +V+G
Sbjct: 137 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK----------------QLVRGE 177
Query: 781 PG--------YLDPEY-FLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREV 827
P Y PE F T DV+S G V ELL G QPI G + V ++
Sbjct: 178 PNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFPGDSGVDQL 232
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 104/236 (44%), Gaps = 42/236 (17%)
Query: 610 NFNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLV 668
++ + IG G +G VY+ L D G +VA+K+ LQ ++ E+Q + +L H N+V
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 110
Query: 669 SLVGYCDEEGEQM------LVYEFMSNGTLR-DQLSAKSKEPLGFAMRLSIALGSSRGIL 721
L + GE+ LV +++ R + +++K+ L R +
Sbjct: 111 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 170
Query: 722 YLHTEADPPVFHRDIKASNILLDHKFTA-KVADFGLSRLAPVPDIEGIVPAHVSTVVKGT 780
Y+H+ + HRDIK N+LLD K+ DFG ++ +V+G
Sbjct: 171 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK----------------QLVRGE 211
Query: 781 PG--------YLDPEY-FLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREV 827
P Y PE F T DV+S G V ELL G QPI G + V ++
Sbjct: 212 PNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFPGDSGVDQL 266
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 104/236 (44%), Gaps = 42/236 (17%)
Query: 610 NFNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLV 668
++ + IG G +G VY+ L D G +VA+K+ LQ ++ E+Q + +L H N+V
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 88
Query: 669 SLVGYCDEEGEQM------LVYEFMSNGTLR-DQLSAKSKEPLGFAMRLSIALGSSRGIL 721
L + GE+ LV +++ R + +++K+ L R +
Sbjct: 89 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 148
Query: 722 YLHTEADPPVFHRDIKASNILLDHKFTA-KVADFGLSRLAPVPDIEGIVPAHVSTVVKGT 780
Y+H+ + HRDIK N+LLD K+ DFG ++ +V+G
Sbjct: 149 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK----------------QLVRGE 189
Query: 781 PG--------YLDPEY-FLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREV 827
P Y PE F T DV+S G V ELL G QPI G + V ++
Sbjct: 190 PNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFPGDSGVDQL 244
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 104/236 (44%), Gaps = 42/236 (17%)
Query: 610 NFNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLV 668
++ + IG G +G VY+ L D G +VA+K+ LQ ++ E+Q + +L H N+V
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 88
Query: 669 SLVGYCDEEGEQM------LVYEFMSNGTLR-DQLSAKSKEPLGFAMRLSIALGSSRGIL 721
L + GE+ LV +++ R + +++K+ L R +
Sbjct: 89 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 148
Query: 722 YLHTEADPPVFHRDIKASNILLDHKFTA-KVADFGLSRLAPVPDIEGIVPAHVSTVVKGT 780
Y+H+ + HRDIK N+LLD K+ DFG ++ +V+G
Sbjct: 149 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK----------------QLVRGE 189
Query: 781 PG--------YLDPEY-FLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREV 827
P Y PE F T DV+S G V ELL G QPI G + V ++
Sbjct: 190 PNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFPGDSGVDQL 244
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 62.0 bits (149), Expect = 2e-09, Method: Composition-based stats.
Identities = 56/218 (25%), Positives = 93/218 (42%), Gaps = 25/218 (11%)
Query: 608 TNNFNSSTQIGQGGYGKVYK------GILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSR 661
++N++ ++G+G + V + G+ ++ K+ Q + E + +
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQ---KLEREARICRK 61
Query: 662 LHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGIL 721
L H N+V L EE LV++ ++ G L + + A+ A + S I
Sbjct: 62 LQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILES--IA 119
Query: 722 YLHTEADPPVFHRDIKASNILLDHKF---TAKVADFGLSRLAPVPDIEGIVPAHVSTVVK 778
Y H+ + HR++K N+LL K K+ADFGL+ V D E
Sbjct: 120 YCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAW------HGFA 168
Query: 779 GTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQP 816
GTPGYL PE + D+++ GV+ LL G P
Sbjct: 169 GTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 62.0 bits (149), Expect = 2e-09, Method: Composition-based stats.
Identities = 56/218 (25%), Positives = 93/218 (42%), Gaps = 25/218 (11%)
Query: 608 TNNFNSSTQIGQGGYGKVYK------GILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSR 661
++N++ ++G+G + V + G+ ++ K+ Q + E + +
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQ---KLEREARICRK 60
Query: 662 LHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGIL 721
L H N+V L EE LV++ ++ G L + + A+ A + S I
Sbjct: 61 LQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILES--IA 118
Query: 722 YLHTEADPPVFHRDIKASNILLDHKF---TAKVADFGLSRLAPVPDIEGIVPAHVSTVVK 778
Y H+ + HR++K N+LL K K+ADFGL+ V D E
Sbjct: 119 YCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAW------HGFA 167
Query: 779 GTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQP 816
GTPGYL PE + D+++ GV+ LL G P
Sbjct: 168 GTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 205
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 62.0 bits (149), Expect = 2e-09, Method: Composition-based stats.
Identities = 56/218 (25%), Positives = 93/218 (42%), Gaps = 25/218 (11%)
Query: 608 TNNFNSSTQIGQGGYGKVYK------GILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSR 661
++N++ ++G+G + V + G+ ++ K+ Q + E + +
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQ---KLEREARICRK 61
Query: 662 LHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGIL 721
L H N+V L EE LV++ ++ G L + + A+ A + S I
Sbjct: 62 LQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILES--IA 119
Query: 722 YLHTEADPPVFHRDIKASNILLDHKF---TAKVADFGLSRLAPVPDIEGIVPAHVSTVVK 778
Y H+ + HR++K N+LL K K+ADFGL+ V D E
Sbjct: 120 YCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAW------HGFA 168
Query: 779 GTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQP 816
GTPGYL PE + D+++ GV+ LL G P
Sbjct: 169 GTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 111/269 (41%), Gaps = 35/269 (13%)
Query: 617 IGQGGYGKVYKGILPDGTVVAVKRAQEGSL-----QGEKEFLTEIQFLSRLHHRNLVSLV 671
+G+GG+ K ++ D V + SL Q EK + EI L H+++V
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSM-EISIHRSLAHQHVVGFH 81
Query: 672 GYCDEEGEQMLVYEFMSNGTLRDQLSAKSK---EPLGFAMRLSIALGSSRGILYLHTEAD 728
G+ ++ +V E +L +L + K EP I LG YLH
Sbjct: 82 GFFEDNDFVFVVLELCRRRSLL-ELHKRRKALTEPEARYYLRQIVLGCQ----YLHRNR- 135
Query: 729 PPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEY 788
V HRD+K N+ L+ K+ DFG LA + +G V+ GTP Y+ PE
Sbjct: 136 --VIHRDLKLGNLFLNEDLEVKIGDFG---LATKVEYDG----ERKKVLCGTPNYIAPEV 186
Query: 789 FLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYP 848
+ + DV+S+G + LL G P + ++E + I N S P
Sbjct: 187 LSKKGHSFEVDVWSIGCIMYTLLVGKPPFE--TSCLKETYLR---------IKKNEYSIP 235
Query: 849 SECVEKFIKLALKCCQDETDARPSMSEVM 877
L K Q + ARP+++E++
Sbjct: 236 KHINPVAASLIQKMLQTDPTARPTINELL 264
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 104/236 (44%), Gaps = 42/236 (17%)
Query: 610 NFNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLV 668
++ + IG G +G VY+ L D G +VA+K+ LQ ++ E+Q + +L H N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 76
Query: 669 SLVGYCDEEGEQM------LVYEFMSNGTLR-DQLSAKSKEPLGFAMRLSIALGSSRGIL 721
L + GE+ LV +++ R + +++K+ L R +
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 722 YLHTEADPPVFHRDIKASNILLDHKFTA-KVADFGLSRLAPVPDIEGIVPAHVSTVVKGT 780
Y+H+ + HRDIK N+LLD K+ DFG ++ +V+G
Sbjct: 137 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK----------------QLVRGE 177
Query: 781 PG--------YLDPEY-FLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREV 827
P Y PE F T DV+S G V ELL G QPI G + V ++
Sbjct: 178 PNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFPGDSGVDQL 232
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 103/234 (44%), Gaps = 22/234 (9%)
Query: 599 FTYGEMALATNNFNSSTQ-IGQGGYGKV--YKGILPDGTVVAVKRAQEGSLQGEKEFLTE 655
+ G M + N Q +G+GG+ V +G L DG A+KR Q +E E
Sbjct: 18 YFQGHMVIIDNKHYLFIQKLGEGGFSYVDLVEG-LHDGHFYALKRILCHEQQDREEAQRE 76
Query: 656 IQFLSRLHHRNLVSLVGYCDEE----GEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMR-- 709
+H N++ LV YC E E L+ F GTL +++ + K+ F
Sbjct: 77 ADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIE-RLKDKGNFLTEDQ 135
Query: 710 -LSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGI 768
L + LG RG+ +H + HRD+K +NILL + + D G A + +EG
Sbjct: 136 ILWLLLGICRGLEAIHAKG---YAHRDLKPTNILLGDEGQPVLMDLGSMNQACI-HVEGS 191
Query: 769 VPA---HVSTVVKGTPGYLDPEYF--LTHKLTD-KSDVYSLGVVFLELLTGMQP 816
A + T Y PE F +H + D ++DV+SLG V ++ G P
Sbjct: 192 RQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGP 245
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 104/236 (44%), Gaps = 42/236 (17%)
Query: 610 NFNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLV 668
++ + IG G +G VY+ L D G +VA+K+ LQ ++ E+Q + +L H N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 76
Query: 669 SLVGYCDEEGEQM------LVYEFMSNGTLR-DQLSAKSKEPLGFAMRLSIALGSSRGIL 721
L + GE+ LV +++ R + +++K+ L R +
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 722 YLHTEADPPVFHRDIKASNILLDHKFTA-KVADFGLSRLAPVPDIEGIVPAHVSTVVKGT 780
Y+H+ + HRDIK N+LLD K+ DFG ++ +V+G
Sbjct: 137 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK----------------QLVRGE 177
Query: 781 PG--------YLDPEY-FLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREV 827
P Y PE F T DV+S G V ELL G QPI G + V ++
Sbjct: 178 PNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFPGDSGVDQL 232
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 96/205 (46%), Gaps = 25/205 (12%)
Query: 617 IGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQGEKE-----FLTEIQFLSRLHHRNLVSL 670
+G+G + VYK + +VA+K+ + G K+ L EI+ L L H N++ L
Sbjct: 18 LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGL 77
Query: 671 VGYCDEEGEQMLVYEFMSNG---TLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEA 727
+ + LV++FM ++D + + M +++ +G+ YLH
Sbjct: 78 LDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTL-----QGLEYLHQHW 132
Query: 728 DPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPE 787
+ HRD+K +N+LLD K+ADFGL++ P+ A+ VV T Y PE
Sbjct: 133 ---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPN-----RAYXHQVV--TRWYRAPE 182
Query: 788 YFLTHKLTDKS-DVYSLGVVFLELL 811
++ D++++G + ELL
Sbjct: 183 LLFGARMYGVGVDMWAVGCILAELL 207
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 98/217 (45%), Gaps = 16/217 (7%)
Query: 609 NNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNL 667
++++ ++G G +G V++ G A K ++ EIQ +S L H L
Sbjct: 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 216
Query: 668 VSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEA 727
V+L +++ E +++YEFMS G L +++ A + + +G+ ++H
Sbjct: 217 VNLHDAFEDDNEMVMIYEFMSGGELFEKV-ADEHNKMSEDEAVEYMRQVCKGLCHMHENN 275
Query: 728 DPPVFHRDIKASNILLDHKFT--AKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLD 785
H D+K NI+ K + K+ DFGL+ + P V GT +
Sbjct: 276 ---YVHLDLKPENIMFTTKRSNELKLIDFGLT--------AHLDPKQSVKVTTGTAEFAA 324
Query: 786 PEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKN 822
PE + +D++S+GV+ LL+G+ P G+N
Sbjct: 325 PEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFG-GEN 360
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 81/168 (48%), Gaps = 28/168 (16%)
Query: 608 TNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKE-----FLTEIQFLSR 661
+ + +IGQG +G+V+K G VA+K+ ++ EKE L EI+ L
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKV---LMENEKEGFPITALREIKILQL 73
Query: 662 LHHRNLVSLVGYCDEEGEQM--------LVYEFMSN---GTLRDQLSAKSKEPLGFAMRL 710
L H N+V+L+ C + LV++F + G L + L + + M++
Sbjct: 74 LKHENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQM 133
Query: 711 SIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSR 758
+ G+ Y+H + HRD+KA+N+L+ K+ADFGL+R
Sbjct: 134 LL-----NGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 61.6 bits (148), Expect = 2e-09, Method: Composition-based stats.
Identities = 56/207 (27%), Positives = 91/207 (43%), Gaps = 18/207 (8%)
Query: 616 QIGQGGYGKVYKGI-LPDGTVVAVK--RAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVG 672
++G+G + V + + + G A K ++ S + ++ E + L H N+V L
Sbjct: 29 ELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHD 88
Query: 673 YCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVF 732
EEG L+++ ++ G L + + A+ A + +L+ H V
Sbjct: 89 SISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQI--LEAVLHCHQMG---VV 143
Query: 733 HRDIKASNILLDHKF---TAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYF 789
HRD+K N+LL K K+ADFGL+ ++EG A GTPGYL PE
Sbjct: 144 HRDLKPENLLLASKLKGAAVKLADFGLA-----IEVEGEQQAWFG--FAGTPGYLSPEVL 196
Query: 790 LTHKLTDKSDVYSLGVVFLELLTGMQP 816
D+++ GV+ LL G P
Sbjct: 197 RKDPYGKPVDLWACGVILYILLVGYPP 223
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 104/236 (44%), Gaps = 42/236 (17%)
Query: 610 NFNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLV 668
++ + IG G +G VY+ L D G +VA+K+ LQ ++ E+Q + +L H N+V
Sbjct: 25 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 80
Query: 669 SLVGYCDEEGEQM------LVYEFMSNGTLR-DQLSAKSKEPLGFAMRLSIALGSSRGIL 721
L + GE+ LV +++ R + +++K+ L R +
Sbjct: 81 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 140
Query: 722 YLHTEADPPVFHRDIKASNILLDHKFTA-KVADFGLSRLAPVPDIEGIVPAHVSTVVKGT 780
Y+H+ + HRDIK N+LLD K+ DFG ++ +V+G
Sbjct: 141 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK----------------QLVRGE 181
Query: 781 PG--------YLDPEY-FLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREV 827
P Y PE F T DV+S G V ELL G QPI G + V ++
Sbjct: 182 PNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFPGDSGVDQL 236
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 92/209 (44%), Gaps = 22/209 (10%)
Query: 617 IGQGGYGKVYKGILPDGTVVAVKRAQEGSL----QGEKEFLTEIQFLSRLHHRNLVSLVG 672
+G+GG+ K Y+ D V + S+ +++ TEI L + ++V G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 673 YCDEEGEQMLVYEFMSNGTLRD---QLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADP 729
+ +++ +V E +L + + A ++ + MR +I +G+ YLH
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI-----QGVQYLHNNR-- 162
Query: 730 PVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYF 789
V HRD+K N+ L+ K+ DFG LA + +G + GTP Y+ PE
Sbjct: 163 -VIHRDLKLGNLFLNDDMDVKIGDFG---LATKIEFDG----ERKKTLCGTPNYIAPEVL 214
Query: 790 LTHKLTDKSDVYSLGVVFLELLTGMQPIS 818
+ + D++SLG + LL G P
Sbjct: 215 CKKGHSFEVDIWSLGCILYTLLVGKPPFE 243
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 98/217 (45%), Gaps = 16/217 (7%)
Query: 609 NNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNL 667
++++ ++G G +G V++ G A K ++ EIQ +S L H L
Sbjct: 51 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 110
Query: 668 VSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEA 727
V+L +++ E +++YEFMS G L +++ A + + +G+ ++H
Sbjct: 111 VNLHDAFEDDNEMVMIYEFMSGGELFEKV-ADEHNKMSEDEAVEYMRQVCKGLCHMHENN 169
Query: 728 DPPVFHRDIKASNILLDHKFT--AKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLD 785
H D+K NI+ K + K+ DFGL+ + P V GT +
Sbjct: 170 ---YVHLDLKPENIMFTTKRSNELKLIDFGLT--------AHLDPKQSVKVTTGTAEFAA 218
Query: 786 PEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKN 822
PE + +D++S+GV+ LL+G+ P G+N
Sbjct: 219 PEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFG-GEN 254
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 110/269 (40%), Gaps = 35/269 (13%)
Query: 617 IGQGGYGKVYKGILPDGTVVAVKRAQEGSL-----QGEKEFLTEIQFLSRLHHRNLVSLV 671
+G+GG+ K ++ D V + SL Q EK + EI L H+++V
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSM-EISIHRSLAHQHVVGFH 83
Query: 672 GYCDEEGEQMLVYEFMSNGTLRDQLSAKSK---EPLGFAMRLSIALGSSRGILYLHTEAD 728
G+ ++ +V E +L +L + K EP I LG YLH
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLL-ELHKRRKALTEPEARYYLRQIVLGCQ----YLHRNR- 137
Query: 729 PPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEY 788
V HRD+K N+ L+ K+ DFGL+ + +G + GTP Y+ PE
Sbjct: 138 --VIHRDLKLGNLFLNEDLEVKIGDFGLATKV---EYDG----ERKKTLCGTPNYIAPEV 188
Query: 789 FLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYP 848
+ + DV+S+G + LL G P + ++E + I N S P
Sbjct: 189 LSKKGHSFEVDVWSIGCIMYTLLVGKPPFE--TSCLKETYLR---------IKKNEYSIP 237
Query: 849 SECVEKFIKLALKCCQDETDARPSMSEVM 877
L K Q + ARP+++E++
Sbjct: 238 KHINPVAASLIQKMLQTDPTARPTINELL 266
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 91/209 (43%), Gaps = 22/209 (10%)
Query: 617 IGQGGYGKVYKGILPDGTVVAVKRAQEGSL----QGEKEFLTEIQFLSRLHHRNLVSLVG 672
+G+GG+ K Y+ D V + S+ +++ TEI L + ++V G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 673 YCDEEGEQMLVYEFMSNGTLRD---QLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADP 729
+ +++ +V E +L + + A ++ + MR +I +G+ YLH
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI-----QGVQYLHNNR-- 162
Query: 730 PVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYF 789
V HRD+K N+ L+ K+ DFGL+ IE + GTP Y+ PE
Sbjct: 163 -VIHRDLKLGNLFLNDDMDVKIGDFGLAT-----KIE--FDGERKKXLCGTPNYIAPEVL 214
Query: 790 LTHKLTDKSDVYSLGVVFLELLTGMQPIS 818
+ + D++SLG + LL G P
Sbjct: 215 CKKGHSFEVDIWSLGCILYTLLVGKPPFE 243
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 110/269 (40%), Gaps = 35/269 (13%)
Query: 617 IGQGGYGKVYKGILPDGTVVAVKRAQEGSL-----QGEKEFLTEIQFLSRLHHRNLVSLV 671
+G+GG+ K ++ D V + SL Q EK + EI L H+++V
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSM-EISIHRSLAHQHVVGFH 83
Query: 672 GYCDEEGEQMLVYEFMSNGTLRDQLSAKSK---EPLGFAMRLSIALGSSRGILYLHTEAD 728
G+ ++ +V E +L +L + K EP I LG YLH
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLL-ELHKRRKALTEPEARYYLRQIVLGCQ----YLHRNR- 137
Query: 729 PPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEY 788
V HRD+K N+ L+ K+ DFGL+ + +G + GTP Y+ PE
Sbjct: 138 --VIHRDLKLGNLFLNEDLEVKIGDFGLATKV---EYDG----ERKKTLCGTPNYIAPEV 188
Query: 789 FLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYP 848
+ + DV+S+G + LL G P + ++E + I N S P
Sbjct: 189 LSKKGHSFEVDVWSIGCIMYTLLVGKPPFE--TSCLKETYLR---------IKKNEYSIP 237
Query: 849 SECVEKFIKLALKCCQDETDARPSMSEVM 877
L K Q + ARP+++E++
Sbjct: 238 KHINPVAASLIQKMLQTDPTARPTINELL 266
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 110/269 (40%), Gaps = 35/269 (13%)
Query: 617 IGQGGYGKVYKGILPDGTVVAVKRAQEGSL-----QGEKEFLTEIQFLSRLHHRNLVSLV 671
+G+GG+ K ++ D V + SL Q EK + EI L H+++V
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSM-EISIHRSLAHQHVVGFH 87
Query: 672 GYCDEEGEQMLVYEFMSNGTLRDQLSAKSK---EPLGFAMRLSIALGSSRGILYLHTEAD 728
G+ ++ +V E +L +L + K EP I LG YLH
Sbjct: 88 GFFEDNDFVFVVLELCRRRSLL-ELHKRRKALTEPEARYYLRQIVLGCQ----YLHRNR- 141
Query: 729 PPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEY 788
V HRD+K N+ L+ K+ DFGL+ + +G + GTP Y+ PE
Sbjct: 142 --VIHRDLKLGNLFLNEDLEVKIGDFGLATKV---EYDG----ERKKTLCGTPNYIAPEV 192
Query: 789 FLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYP 848
+ + DV+S+G + LL G P + ++E + I N S P
Sbjct: 193 LSKKGHSFEVDVWSIGCIMYTLLVGKPPFE--TSCLKETYLR---------IKKNEYSIP 241
Query: 849 SECVEKFIKLALKCCQDETDARPSMSEVM 877
L K Q + ARP+++E++
Sbjct: 242 KHINPVAASLIQKMLQTDPTARPTINELL 270
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 123/310 (39%), Gaps = 43/310 (13%)
Query: 31 ITDPIEVSALRSIKKSLVDDYSKLSNW-NRGDPCTSNWTGVLCFNTTMDDGYXXXXXXXX 89
+ +P + AL IKK L + + LS+W D C W GVLC D
Sbjct: 2 LCNPQDKQALLQIKKDL-GNPTTLSSWLPTTDCCNRTWLGVLC----DTDTQTYRVNNLD 56
Query: 90 XXXXXXXXXSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKXXXXXXXXXXXXXXXXPEE 149
P L+ L L+F++ G I +G I P
Sbjct: 57 LSGLNLPKPYPIPSSLANLPYLNFLY---IGGINNLVGPI-----------------PPA 96
Query: 150 LGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLL 209
+ L +L + I +SG++P + + + N++SG +PP +S LP+LV +
Sbjct: 97 IAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITF 156
Query: 210 DNNNLTGYXXXXXXXXXXXXXXXXDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPD 269
D N ++G + N IP +++N++ L + L L+G
Sbjct: 157 DGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASV 215
Query: 270 L---------------SRIPNLGYL-LSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFI 313
L S +LG + LS N+ + L NN++ GT+P + L L L +
Sbjct: 216 LFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNV 275
Query: 314 ANNSLSGSIP 323
+ N+L G IP
Sbjct: 276 SFNNLCGEIP 285
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 90/203 (44%), Gaps = 17/203 (8%)
Query: 147 PEELGYLPKLDRIQIDQ-NYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLV 205
P L LP L+ + I N + G +P + A L + + ++ + ++SG IP LS++ +LV
Sbjct: 69 PSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLV 128
Query: 206 HMLLDNNNLTGYXXXXXXXXXXXXXXXXDNNNFEGTTIPASYSNMSKLL-KLSLRNCSLQ 264
+ N L+G D N G IP SY + SKL +++ L
Sbjct: 129 TLDFSYNALSGTLPPSISSLPNLVGITFDGNRISG-AIPDSYGSFSKLFTSMTISRNRLT 187
Query: 265 GPMPDLSRIPNLGYLLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPS 324
G +P P +LN+ + LS N L G F Q++ +A NSL+ +
Sbjct: 188 GKIP-----PTFA---NLNLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDL-G 238
Query: 325 SIWQSRTLNATETFILDFQNNNL 347
+ S+ LN LD +NN +
Sbjct: 239 KVGLSKNLNG-----LDLRNNRI 256
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 100/223 (44%), Gaps = 29/223 (13%)
Query: 617 IGQGGYGKVYKGILPDGTVVAVKRAQEGSL--------QGEKEFLTEIQFLSRLHHRNLV 668
+G+G YGKV K +L T+ +RA + GE EIQ L RL H+N++
Sbjct: 13 LGEGSYGKV-KEVLDSETLC--RRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVI 69
Query: 669 SLVG--YCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTE 726
LV Y +E+ + +V E+ G +++ L + ++ G+ YLH++
Sbjct: 70 QLVDVLYNEEKQKMYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQ 128
Query: 727 ADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDP 786
+ H+DIK N+LL T K++ G++ + +G+P + P
Sbjct: 129 G---IVHKDIKPGNLLLTTGGTLKISALGVAEA-----LHPFAADDTCRTSQGSPAFQPP 180
Query: 787 EYFLTHKLTD----KSDVYSLGVVFLELLTGMQPISHGKNIVR 825
E + + L K D++S GV + TG+ P G NI +
Sbjct: 181 E--IANGLDTFSGFKVDIWSAGVTLYNITTGLYPFE-GDNIYK 220
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 91/208 (43%), Gaps = 24/208 (11%)
Query: 618 GQGGYGKVYKGILPDGTVVAVKR---AQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYC 674
+G +G V+K L + VAVK + S Q E E + L + H N++ +G
Sbjct: 33 ARGRFGCVWKAQLLN-EYVAVKIFPIQDKQSWQNEYEVYS----LPGMKHENILQFIG-A 86
Query: 675 DEEGEQM-----LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEA-- 727
++ G + L+ F G+L D L A + + IA +RG+ YLH +
Sbjct: 87 EKRGTSVDVDLWLITAFHEKGSLSDFLKANV---VSWNELCHIAETMARGLAYLHEDIPG 143
Query: 728 -----DPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPG 782
P + HRDIK+ N+LL + TA +ADFGL+ G V T P
Sbjct: 144 LKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPE 203
Query: 783 YLDPEYFLTHKLTDKSDVYSLGVVFLEL 810
L+ + D+Y++G+V EL
Sbjct: 204 VLEGAINFQRDAFLRIDMYAMGLVLWEL 231
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 94/224 (41%), Gaps = 22/224 (9%)
Query: 602 GEMALAT-NNFNSSTQIGQGGYGKVYKGIL----PDGTVVAVKRAQEGSLQGEKEF---L 653
G MA T N F +G+G +GKV IL G A+K ++ + + E L
Sbjct: 1 GAMARVTMNEFEYLKLLGKGTFGKV---ILVKEKATGRYYAMKILKKEVIVAKDEVAHTL 57
Query: 654 TEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIA 713
TE + L H L +L V E+ + G L LS + A
Sbjct: 58 TENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAE 117
Query: 714 LGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHV 773
+ S+ + YLH+E + V +RD+K N++LD K+ DFGL + EGI
Sbjct: 118 IVSA--LDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCK-------EGIKDGAT 166
Query: 774 STVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPI 817
GTP YL PE + D + LGVV E++ G P
Sbjct: 167 MKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 210
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 93/227 (40%), Gaps = 43/227 (18%)
Query: 607 ATNNFNSSTQIGQGGYGKVY------------KGILPDGTVVAVKRAQEGSLQGEKEFLT 654
+ +F +G G +G+V+ +L VV +K+ + +
Sbjct: 4 SLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTN--------D 55
Query: 655 EIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEP----LGFAMRL 710
E LS + H ++ + G + + ++ +++ G L L + P +A +
Sbjct: 56 ERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEV 115
Query: 711 SIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVP 770
+AL YLH++ + +RD+K NILLD K+ DFG ++ P
Sbjct: 116 CLALE------YLHSKD---IIYRDLKPENILLDKNGHIKITDFGFAKYVP--------- 157
Query: 771 AHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPI 817
V+ + GTP Y+ PE T D +S G++ E+L G P
Sbjct: 158 -DVTYXLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPF 203
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 112/246 (45%), Gaps = 26/246 (10%)
Query: 639 KRAQEGSLQG--EKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQL 696
KR S +G +E E+ L ++ H N+++L + + +L+ E +S G L D L
Sbjct: 47 KRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL 106
Query: 697 SAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFT----AKVA 752
+ KE L S G+ YLHT+ + H D+K NI+L K K+
Sbjct: 107 A--QKESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLI 161
Query: 753 DFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT 812
DFGL+ +IE V + GTP ++ PE L ++D++S+GV+ LL+
Sbjct: 162 DFGLAH-----EIEDGVEF---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 213
Query: 813 GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPS 872
G P ++ +A +++ + D S SE + FI+ K ET R +
Sbjct: 214 GASPFLGD---TKQETLANITAVSYD-FDEEFFSQTSELAKDFIR---KLLVKETRKRLT 266
Query: 873 MSEVMR 878
+ E +R
Sbjct: 267 IQEALR 272
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 94/215 (43%), Gaps = 25/215 (11%)
Query: 610 NFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSL-----QGEKEFLTEIQFLSRLH 663
N+ +G+G +GKV G VA+K + L QG E EI +L L
Sbjct: 14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLR 71
Query: 664 HRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYL 723
H +++ L + E ++V E+ N L D + + K A R + S+ + Y
Sbjct: 72 HPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQIISA--VEYC 128
Query: 724 HTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGY 783
H + HRD+K N+LLD K+ADFGLS + + + G+P Y
Sbjct: 129 HRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNI--------MTDGNFLKTSCGSPNY 177
Query: 784 LDPEYFLTHKLTD--KSDVYSLGVVFLELLTGMQP 816
PE ++ KL + DV+S GV+ +L P
Sbjct: 178 AAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLP 211
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 94/215 (43%), Gaps = 25/215 (11%)
Query: 610 NFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSL-----QGEKEFLTEIQFLSRLH 663
N+ +G+G +GKV G VA+K + L QG E EI +L L
Sbjct: 9 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLR 66
Query: 664 HRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYL 723
H +++ L + E ++V E+ N L D + + K A R + S+ + Y
Sbjct: 67 HPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQIISA--VEYC 123
Query: 724 HTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGY 783
H + HRD+K N+LLD K+ADFGLS + + + G+P Y
Sbjct: 124 HRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNI--------MTDGNFLKTSCGSPNY 172
Query: 784 LDPEYFLTHKLTD--KSDVYSLGVVFLELLTGMQP 816
PE ++ KL + DV+S GV+ +L P
Sbjct: 173 AAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLP 206
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 94/215 (43%), Gaps = 25/215 (11%)
Query: 610 NFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSL-----QGEKEFLTEIQFLSRLH 663
N+ +G+G +GKV G VA+K + L QG E EI +L L
Sbjct: 5 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLR 62
Query: 664 HRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYL 723
H +++ L + E ++V E+ N L D + + K A R + S+ + Y
Sbjct: 63 HPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQIISA--VEYC 119
Query: 724 HTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGY 783
H + HRD+K N+LLD K+ADFGLS + + + G+P Y
Sbjct: 120 HRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNI--------MTDGNFLKTSCGSPNY 168
Query: 784 LDPEYFLTHKLTD--KSDVYSLGVVFLELLTGMQP 816
PE ++ KL + DV+S GV+ +L P
Sbjct: 169 AAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLP 202
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 99/236 (41%), Gaps = 36/236 (15%)
Query: 654 TEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQL--SAKSKEPLGFAMRLS 711
TEI+ L +L+H ++ + + D E + +V E M G L D++ + + KE
Sbjct: 63 TEIEILKKLNHPCIIKIKNFFDAE-DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 121
Query: 712 IALGSSRGILYLHTEADPPVFHRDIKASNILL---DHKFTAKVADFGLSRLAPVPDIEGI 768
+ L + YLH + HRD+K N+LL + K+ DFG S++ +
Sbjct: 122 MLL----AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--------L 166
Query: 769 VPAHVSTVVKGTPGYLDPEYFL---THKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVR 825
+ + GTP YL PE + T D +SLGV+ L+G P S +
Sbjct: 167 GETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT--- 223
Query: 826 EVNIAYQSSMMFSVIDGNMGSYP---SECVEKFIKLALKCCQDETDARPSMSEVMR 878
Q S+ + G P +E EK + L K + AR + E +R
Sbjct: 224 ------QVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 273
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 99/236 (41%), Gaps = 36/236 (15%)
Query: 654 TEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQL--SAKSKEPLGFAMRLS 711
TEI+ L +L+H ++ + + D E + +V E M G L D++ + + KE
Sbjct: 64 TEIEILKKLNHPCIIKIKNFFDAE-DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 122
Query: 712 IALGSSRGILYLHTEADPPVFHRDIKASNILL---DHKFTAKVADFGLSRLAPVPDIEGI 768
+ L + YLH + HRD+K N+LL + K+ DFG S++ +
Sbjct: 123 MLL----AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--------L 167
Query: 769 VPAHVSTVVKGTPGYLDPEYFL---THKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVR 825
+ + GTP YL PE + T D +SLGV+ L+G P S +
Sbjct: 168 GETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT--- 224
Query: 826 EVNIAYQSSMMFSVIDGNMGSYP---SECVEKFIKLALKCCQDETDARPSMSEVMR 878
Q S+ + G P +E EK + L K + AR + E +R
Sbjct: 225 ------QVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 274
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 99/236 (41%), Gaps = 36/236 (15%)
Query: 654 TEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQL--SAKSKEPLGFAMRLS 711
TEI+ L +L+H ++ + + D E + +V E M G L D++ + + KE
Sbjct: 64 TEIEILKKLNHPCIIKIKNFFDAE-DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 122
Query: 712 IALGSSRGILYLHTEADPPVFHRDIKASNILL---DHKFTAKVADFGLSRLAPVPDIEGI 768
+ L + YLH + HRD+K N+LL + K+ DFG S++ +
Sbjct: 123 MLL----AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--------L 167
Query: 769 VPAHVSTVVKGTPGYLDPEYFL---THKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVR 825
+ + GTP YL PE + T D +SLGV+ L+G P S +
Sbjct: 168 GETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT--- 224
Query: 826 EVNIAYQSSMMFSVIDGNMGSYP---SECVEKFIKLALKCCQDETDARPSMSEVMR 878
Q S+ + G P +E EK + L K + AR + E +R
Sbjct: 225 ------QVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 274
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 94/215 (43%), Gaps = 25/215 (11%)
Query: 610 NFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSL-----QGEKEFLTEIQFLSRLH 663
N+ +G+G +GKV G VA+K + L QG E EI +L L
Sbjct: 15 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLR 72
Query: 664 HRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYL 723
H +++ L + E ++V E+ N L D + + K A R + S+ + Y
Sbjct: 73 HPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQIISA--VEYC 129
Query: 724 HTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGY 783
H + HRD+K N+LLD K+ADFGLS + + + G+P Y
Sbjct: 130 HRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNI--------MTDGNFLKTSCGSPNY 178
Query: 784 LDPEYFLTHKLTD--KSDVYSLGVVFLELLTGMQP 816
PE ++ KL + DV+S GV+ +L P
Sbjct: 179 AAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLP 212
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 99/236 (41%), Gaps = 36/236 (15%)
Query: 654 TEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQL--SAKSKEPLGFAMRLS 711
TEI+ L +L+H ++ + + D E + +V E M G L D++ + + KE
Sbjct: 70 TEIEILKKLNHPCIIKIKNFFDAE-DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 128
Query: 712 IALGSSRGILYLHTEADPPVFHRDIKASNILL---DHKFTAKVADFGLSRLAPVPDIEGI 768
+ L + YLH + HRD+K N+LL + K+ DFG S++ +
Sbjct: 129 MLL----AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--------L 173
Query: 769 VPAHVSTVVKGTPGYLDPEYFL---THKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVR 825
+ + GTP YL PE + T D +SLGV+ L+G P S +
Sbjct: 174 GETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT--- 230
Query: 826 EVNIAYQSSMMFSVIDGNMGSYP---SECVEKFIKLALKCCQDETDARPSMSEVMR 878
Q S+ + G P +E EK + L K + AR + E +R
Sbjct: 231 ------QVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 280
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 99/236 (41%), Gaps = 36/236 (15%)
Query: 654 TEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQL--SAKSKEPLGFAMRLS 711
TEI+ L +L+H ++ + + D E + +V E M G L D++ + + KE
Sbjct: 64 TEIEILKKLNHPCIIKIKNFFDAE-DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 122
Query: 712 IALGSSRGILYLHTEADPPVFHRDIKASNILL---DHKFTAKVADFGLSRLAPVPDIEGI 768
+ L + YLH + HRD+K N+LL + K+ DFG S++ +
Sbjct: 123 MLL----AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--------L 167
Query: 769 VPAHVSTVVKGTPGYLDPEYFL---THKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVR 825
+ + GTP YL PE + T D +SLGV+ L+G P S +
Sbjct: 168 GETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT--- 224
Query: 826 EVNIAYQSSMMFSVIDGNMGSYP---SECVEKFIKLALKCCQDETDARPSMSEVMR 878
Q S+ + G P +E EK + L K + AR + E +R
Sbjct: 225 ------QVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 274
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 126/289 (43%), Gaps = 38/289 (13%)
Query: 604 MALATNNFNSSTQIGQGGYGKVYK-GILPDGTVVAVKRAQEG-SLQGEKEFLTEIQFLSR 661
M + ++ ++G+G YG V K +P G ++AVKR + + Q +K L ++ R
Sbjct: 2 MEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMR 61
Query: 662 -LHHRNLVSLVGYCDEEGEQMLVYEFMSNG------TLRDQLSAKSKEPLGFAMRLSIAL 714
+ V+ G EG+ + E M + D+ ++ LG IA+
Sbjct: 62 TVDCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILG-----KIAV 116
Query: 715 GSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVS 774
+ + +LH++ V HRD+K SN+L++ K+ DFG+S V D+ + A
Sbjct: 117 SIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYL-VDDVAKDIDA--- 170
Query: 775 TVVKGTPGYLDPEYF---LTHK-LTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIA 830
G Y+ PE L K + KSD++SLG+ +EL P +++
Sbjct: 171 ----GCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLK-- 224
Query: 831 YQSSMMFSVIDGNMGSYPSECVE-KFIKLALKCCQDETDARPSMSEVMR 878
V++ P++ +F+ +C + + RP+ E+M+
Sbjct: 225 -------QVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 92/209 (44%), Gaps = 22/209 (10%)
Query: 617 IGQGGYGKVYKGILPDGTVVAVKRAQEGSL----QGEKEFLTEIQFLSRLHHRNLVSLVG 672
+G+GG+ K Y+ D V + S+ +++ TEI L + ++V G
Sbjct: 34 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 93
Query: 673 YCDEEGEQMLVYEFMSNGTLRD---QLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADP 729
+ +++ +V E +L + + A ++ + MR +I +G+ YLH
Sbjct: 94 FFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI-----QGVQYLHNNR-- 146
Query: 730 PVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYF 789
V HRD+K N+ L+ K+ DFG LA + +G + GTP Y+ PE
Sbjct: 147 -VIHRDLKLGNLFLNDDMDVKIGDFG---LATKIEFDGERKKDLC----GTPNYIAPEVL 198
Query: 790 LTHKLTDKSDVYSLGVVFLELLTGMQPIS 818
+ + D++SLG + LL G P
Sbjct: 199 CKKGHSFEVDIWSLGCILYTLLVGKPPFE 227
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 112/246 (45%), Gaps = 26/246 (10%)
Query: 639 KRAQEGSLQG--EKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQL 696
KR S +G +E E+ L ++ H N+++L + + +L+ E +S G L D L
Sbjct: 47 KRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL 106
Query: 697 SAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFT----AKVA 752
+ KE L S G+ YLHT+ + H D+K NI+L K K+
Sbjct: 107 A--QKESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLI 161
Query: 753 DFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT 812
DFGL+ +IE V + GTP ++ PE L ++D++S+GV+ LL+
Sbjct: 162 DFGLAH-----EIEDGVEF---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 213
Query: 813 GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPS 872
G P ++ +A +++ + D S SE + FI+ K ET R +
Sbjct: 214 GASPFLGD---TKQETLANITAVSYD-FDEEFFSQTSELAKDFIR---KLLVKETRKRLT 266
Query: 873 MSEVMR 878
+ E +R
Sbjct: 267 IQEALR 272
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 92/209 (44%), Gaps = 22/209 (10%)
Query: 617 IGQGGYGKVYKGILPDGTVVAVKRAQEGSL----QGEKEFLTEIQFLSRLHHRNLVSLVG 672
+G+GG+ K Y+ D V + S+ +++ TEI L + ++V G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 673 YCDEEGEQMLVYEFMSNGTLRD---QLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADP 729
+ +++ +V E +L + + A ++ + MR +I +G+ YLH
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI-----QGVQYLHNNR-- 162
Query: 730 PVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYF 789
V HRD+K N+ L+ K+ DFG LA + +G + GTP Y+ PE
Sbjct: 163 -VIHRDLKLGNLFLNDDMDVKIGDFG---LATKIEFDG----ERKKDLCGTPNYIAPEVL 214
Query: 790 LTHKLTDKSDVYSLGVVFLELLTGMQPIS 818
+ + D++SLG + LL G P
Sbjct: 215 CKKGHSFEVDIWSLGCILYTLLVGKPPFE 243
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 95/224 (42%), Gaps = 22/224 (9%)
Query: 617 IGQGGYGKVYKGILP-DGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSL--- 670
IG G YG V G VA+K+ + K L E++ L H N++++
Sbjct: 63 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDI 122
Query: 671 ----VGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTE 726
V Y GE VY + S +PL RG+ Y+H+
Sbjct: 123 LRPTVPY----GEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSA 178
Query: 727 ADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDP 786
V HRD+K SN+L++ K+ DFG++R E + T T Y P
Sbjct: 179 Q---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEH---QYFMTEYVATRWYRAP 232
Query: 787 EYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNI 829
E L+ H+ T D++S+G +F E+L Q + GKN V ++ +
Sbjct: 233 ELMLSLHEYTQAIDLWSVGCIFGEMLARRQ-LFPGKNYVHQLQL 275
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 95/218 (43%), Gaps = 25/218 (11%)
Query: 609 NNFNSSTQIGQGGYGKVYKGILPDGTVV-AVKRAQEGSL---QGEKEFLTEIQ-FLSRLH 663
++F+ IG+G +GKV V AVK Q+ ++ + EK ++E L +
Sbjct: 38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVK 97
Query: 664 HRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKS--KEPLG--FAMRLSIALGSSRG 719
H LV L + V ++++ G L L + EP +A ++ ALG
Sbjct: 98 HPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALG---- 153
Query: 720 ILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKG 779
YLH+ + +RD+K NILLD + + DFGL + E I ++ G
Sbjct: 154 --YLHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCK-------ENIEHNSTTSTFCG 201
Query: 780 TPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPI 817
TP YL PE D + LG V E+L G+ P
Sbjct: 202 TPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPF 239
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 112/246 (45%), Gaps = 26/246 (10%)
Query: 639 KRAQEGSLQG--EKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQL 696
KR S +G +E E+ L ++ H N+++L + + +L+ E +S G L D L
Sbjct: 47 KRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFL 106
Query: 697 SAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFT----AKVA 752
+ KE L S G+ YLHT+ + H D+K NI+L K K+
Sbjct: 107 A--QKESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLI 161
Query: 753 DFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT 812
DFGL+ +IE V + GTP ++ PE L ++D++S+GV+ LL+
Sbjct: 162 DFGLAH-----EIEDGVEF---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 213
Query: 813 GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPS 872
G P ++ +A +++ + D S SE + FI+ K ET R +
Sbjct: 214 GASPFLGD---TKQETLANITAVSYD-FDEEFFSQTSELAKDFIR---KLLVKETRKRLT 266
Query: 873 MSEVMR 878
+ E +R
Sbjct: 267 IQEALR 272
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 91/219 (41%), Gaps = 21/219 (9%)
Query: 606 LATNNFNSSTQIGQGGYGKVYKGIL----PDGTVVAVKRAQEGSLQGEKEF---LTEIQF 658
+ N F +G+G +GKV IL G A+K ++ + + E LTE +
Sbjct: 145 VTMNEFEYLKLLGKGTFGKV---ILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRV 201
Query: 659 LSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSR 718
L H L +L V E+ + G L LS + A + S+
Sbjct: 202 LQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSA- 260
Query: 719 GILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVK 778
+ YLH+E + V +RD+K N++LD K+ DFGL + EGI
Sbjct: 261 -LDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCK-------EGIKDGATMKTFC 310
Query: 779 GTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPI 817
GTP YL PE + D + LGVV E++ G P
Sbjct: 311 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 349
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 103/222 (46%), Gaps = 23/222 (10%)
Query: 610 NFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKE-FLTEIQFLSRLHHRNL 667
+F +G+GG+G V++ D A+KR + + + +E + E++ L++L H +
Sbjct: 6 DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGI 65
Query: 668 VSLV-GYCDEEGEQML------VYEFMS-----NGTLRDQLSAKSK-EPLGFAMRLSIAL 714
V + ++ + L VY ++ L+D ++ + E ++ L I L
Sbjct: 66 VRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFL 125
Query: 715 GSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIV----P 770
+ + +LH++ + HRD+K SNI KV DFGL + E V P
Sbjct: 126 QIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMP 182
Query: 771 AHVS-TVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELL 811
A+ T GT Y+ PE + + K D++SLG++ ELL
Sbjct: 183 AYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 95/215 (44%), Gaps = 33/215 (15%)
Query: 618 GQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSR--LHHRNLVSLVGY-- 673
+G +G V+K L + VAVK LQ ++ + +E + S + H NL+ +
Sbjct: 24 ARGRFGCVWKAQLMN-DFVAVKIF---PLQDKQSWQSEREIFSTPGMKHENLLQFIAAEK 79
Query: 674 --CDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEA---- 727
+ E E L+ F G+L D L + + +A SRG+ YLH +
Sbjct: 80 RGSNLEVELWLITAFHDKGSLTDYLKGNI---ITWNELCHVAETMSRGLSYLHEDVPWCR 136
Query: 728 ----DPPVFHRDIKASNILLDHKFTAKVADFGLS-RLAPVPDIEGIVPAHVSTVVKGTPG 782
P + HRD K+ N+LL TA +ADFGL+ R P G P V GT
Sbjct: 137 GEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEP-----GKPPGDTHGQV-GTRR 190
Query: 783 YLDPEYF-----LTHKLTDKSDVYSLGVVFLELLT 812
Y+ PE + D+Y++G+V EL++
Sbjct: 191 YMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVS 225
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 83/174 (47%), Gaps = 22/174 (12%)
Query: 650 KEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML--VYEFMSNGTLRD--QLSAKSKEPLG 705
++ EI L +L H N+V LV D+ E L V+E ++ G + + L S++
Sbjct: 81 EQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQAR 140
Query: 706 FAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 765
F + I +GI YLH + + HRDIK SN+L+ K+ADFG+S D
Sbjct: 141 FYFQDLI-----KGIEYLHYQK---IIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSD- 191
Query: 766 EGIVPAHVSTVVKGTPGYLDPEYF-LTHKLTDKS--DVYSLGVVFLELLTGMQP 816
A +S V GTP ++ PE T K+ DV+++GV + G P
Sbjct: 192 -----ALLSNTV-GTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCP 239
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 91/219 (41%), Gaps = 21/219 (9%)
Query: 606 LATNNFNSSTQIGQGGYGKVYKGIL----PDGTVVAVKRAQEGSLQGEKEF---LTEIQF 658
+ N F +G+G +GKV IL G A+K ++ + + E LTE +
Sbjct: 148 VTMNEFEYLKLLGKGTFGKV---ILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRV 204
Query: 659 LSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSR 718
L H L +L V E+ + G L LS + A + S+
Sbjct: 205 LQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSA- 263
Query: 719 GILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVK 778
+ YLH+E + V +RD+K N++LD K+ DFGL + EGI
Sbjct: 264 -LDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCK-------EGIKDGATMKTFC 313
Query: 779 GTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPI 817
GTP YL PE + D + LGVV E++ G P
Sbjct: 314 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 352
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 112/255 (43%), Gaps = 42/255 (16%)
Query: 608 TNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHH-- 664
++F +GQG +G+V K D A+K+ + + L+E+ L+ L+H
Sbjct: 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE-EKLSTILSEVMLLASLNHQY 63
Query: 665 -----------RNLVSLVGYCDEEGEQMLVYEFMSNGTLRD-----QLSAKSKEPLGFAM 708
RN V + ++ + E+ N TL D L+ + E
Sbjct: 64 VVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFR 123
Query: 709 RLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSR-LAPVPDIEG 767
++ AL Y+H++ + HRD+K NI +D K+ DFGL++ + DI
Sbjct: 124 QILEALS------YIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILK 174
Query: 768 IVPAHVS------TVVKGTPGYLDPEYFL-THKLTDKSDVYSLGVVFLELL----TGMQP 816
+ ++ T GT Y+ E T +K D+YSLG++F E++ TGM+
Sbjct: 175 LDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFSTGMER 234
Query: 817 ISHGKNIVREVNIAY 831
++ K + R V+I +
Sbjct: 235 VNILKKL-RSVSIEF 248
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 95/224 (42%), Gaps = 22/224 (9%)
Query: 617 IGQGGYGKVYKGILP-DGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSL--- 670
IG G YG V G VA+K+ + K L E++ L H N++++
Sbjct: 62 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDI 121
Query: 671 ----VGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTE 726
V Y GE VY + S +PL RG+ Y+H+
Sbjct: 122 LRPTVPY----GEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSA 177
Query: 727 ADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDP 786
V HRD+K SN+L++ K+ DFG++R E + T T Y P
Sbjct: 178 Q---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEH---QYFMTEYVATRWYRAP 231
Query: 787 EYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNI 829
E L+ H+ T D++S+G +F E+L Q + GKN V ++ +
Sbjct: 232 ELMLSLHEYTQAIDLWSVGCIFGEMLARRQ-LFPGKNYVHQLQL 274
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 91/219 (41%), Gaps = 21/219 (9%)
Query: 606 LATNNFNSSTQIGQGGYGKVYKGIL----PDGTVVAVKRAQEGSLQGEKEF---LTEIQF 658
+ N F +G+G +GKV IL G A+K ++ + + E LTE +
Sbjct: 5 VTMNEFEYLKLLGKGTFGKV---ILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRV 61
Query: 659 LSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSR 718
L H L +L V E+ + G L LS + A + S+
Sbjct: 62 LQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSA- 120
Query: 719 GILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVK 778
+ YLH+E + V +RD+K N++LD K+ DFGL + EGI
Sbjct: 121 -LDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCK-------EGIKDGATMKXFC 170
Query: 779 GTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPI 817
GTP YL PE + D + LGVV E++ G P
Sbjct: 171 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 209
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 91/219 (41%), Gaps = 21/219 (9%)
Query: 606 LATNNFNSSTQIGQGGYGKVYKGIL----PDGTVVAVKRAQEGSLQGEKEF---LTEIQF 658
+ N F +G+G +GKV IL G A+K ++ + + E LTE +
Sbjct: 7 VTMNEFEYLKLLGKGTFGKV---ILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRV 63
Query: 659 LSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSR 718
L H L +L V E+ + G L LS + A + S+
Sbjct: 64 LQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSA- 122
Query: 719 GILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVK 778
+ YLH+E + V +RD+K N++LD K+ DFGL + EGI
Sbjct: 123 -LDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCK-------EGIKDGATMKXFC 172
Query: 779 GTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPI 817
GTP YL PE + D + LGVV E++ G P
Sbjct: 173 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 211
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 109/258 (42%), Gaps = 27/258 (10%)
Query: 608 TNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQ--EGSLQGEKEFLTEIQFLSRLHH 664
+++F + +G+G YG V P G +VA+K+ + + L + L EI+ L H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRT-LREIKILKHFKH 68
Query: 665 RNLVSLVGYCDEEG-----EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRG 719
N++++ + E ++ E M R S + L + R
Sbjct: 69 ENIITIFNIQRPDSFENFNEVYIIQELMQTDLHR----VISTQMLSDDHIQYFIYQTLRA 124
Query: 720 ILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVP-AHVSTVVK 778
+ LH V HRD+K SN+L++ KV DFGL+R+ + P S +V+
Sbjct: 125 VKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVE 181
Query: 779 --GTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSM 835
T Y PE LT K + DV+S G + EL +PI G+ + +Q +
Sbjct: 182 FVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPIFPGR------DYRHQLLL 234
Query: 836 MFSVIDGNMGSYPSECVE 853
+F +I C+E
Sbjct: 235 IFGIIGTPHSDNDLRCIE 252
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 122/283 (43%), Gaps = 50/283 (17%)
Query: 559 VTISAIVSLLIVRAHMKNYHAISRRRHSSKTSIKIDGVRSFT--YGEMALATNNFNSSTQ 616
+++ ++ +L+ ++ A+ R ++ ++ ++ + FT EM L +F
Sbjct: 25 LSVETLLDVLVCLYTECSHSALRRDKYVAEF---LEWAKPFTQLVKEMQLHREDFEIIKV 81
Query: 617 IGQGGYGKVYKGILPDGTVV----------AVKRAQEGSLQGEKEFLT--EIQFLSRLHH 664
IG+G +G+V + + + +KRA+ + E++ L + Q+++ LH+
Sbjct: 82 IGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQWITALHY 141
Query: 665 RNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSA-KSKEPLGFAM----RLSIALGSSRG 719
+E LV ++ G L LS + K P A + +A+ S
Sbjct: 142 A--------FQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQ 193
Query: 720 ILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKG 779
+ Y+H RDIK N+LLD ++ADFG S L D G V S+V G
Sbjct: 194 LHYVH---------RDIKPDNVLLDVNGHIRLADFG-SCLKMNDD--GTVQ---SSVAVG 238
Query: 780 TPGYLDPEYFLTH-----KLTDKSDVYSLGVVFLELLTGMQPI 817
TP Y+ PE K + D +SLGV E+L G P
Sbjct: 239 TPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPF 281
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 91/221 (41%), Gaps = 26/221 (11%)
Query: 606 LATNNFNSSTQIGQGGYGKVYKGIL----PDGTVVAVKRAQEGSLQGEKEF---LTEIQF 658
+ N+F+ +G+G +GKV IL G A+K ++ + + E +TE +
Sbjct: 2 VTMNDFDYLKLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRV 58
Query: 659 LSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSS- 717
L H L +L V E+ + G L LS + F + G+
Sbjct: 59 LQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERV----FTEERARFYGAEI 114
Query: 718 -RGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTV 776
+ YLH+ V +RDIK N++LD K+ DFGL + EGI
Sbjct: 115 VSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK-------EGISDGATMKT 164
Query: 777 VKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPI 817
GTP YL PE + D + LGVV E++ G P
Sbjct: 165 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 106/258 (41%), Gaps = 27/258 (10%)
Query: 608 TNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQ--EGSLQGEKEFLTEIQFLSRLHH 664
+++F + +G+G YG V P G +VA+K+ + + L + L EI+ L H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRT-LREIKILKHFKH 68
Query: 665 RNLVSLVGYCDEEG-----EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRG 719
N++++ + E ++ E M R S + L + R
Sbjct: 69 ENIITIFNIQRPDSFENFNEVYIIQELMQTDLHR----VISTQMLSDDHIQYFIYQTLRA 124
Query: 720 ILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVS---TV 776
+ LH V HRD+K SN+L++ KV DFGL+R+ + P T
Sbjct: 125 VKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTE 181
Query: 777 VKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSM 835
T Y PE LT K + DV+S G + EL +PI G+ + +Q +
Sbjct: 182 XVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPIFPGR------DYRHQLLL 234
Query: 836 MFSVIDGNMGSYPSECVE 853
+F +I C+E
Sbjct: 235 IFGIIGTPHSDNDLRCIE 252
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 91/221 (41%), Gaps = 26/221 (11%)
Query: 606 LATNNFNSSTQIGQGGYGKVYKGIL----PDGTVVAVKRAQEGSLQGEKEF---LTEIQF 658
+ N+F+ +G+G +GKV IL G A+K ++ + + E +TE +
Sbjct: 5 VTMNDFDYLKLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRV 61
Query: 659 LSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSS- 717
L H L +L V E+ + G L LS + F + G+
Sbjct: 62 LQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERV----FTEERARFYGAEI 117
Query: 718 -RGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTV 776
+ YLH+ V +RDIK N++LD K+ DFGL + EGI
Sbjct: 118 VSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK-------EGISDGATMKT 167
Query: 777 VKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPI 817
GTP YL PE + D + LGVV E++ G P
Sbjct: 168 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 208
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 91/221 (41%), Gaps = 26/221 (11%)
Query: 606 LATNNFNSSTQIGQGGYGKVYKGIL----PDGTVVAVKRAQEGSLQGEKEF---LTEIQF 658
+ N+F+ +G+G +GKV IL G A+K ++ + + E +TE +
Sbjct: 2 VTMNDFDYLKLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRV 58
Query: 659 LSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSS- 717
L H L +L V E+ + G L LS + F + G+
Sbjct: 59 LQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERV----FTEERARFYGAEI 114
Query: 718 -RGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTV 776
+ YLH+ V +RDIK N++LD K+ DFGL + EGI
Sbjct: 115 VSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK-------EGISDGATMKT 164
Query: 777 VKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPI 817
GTP YL PE + D + LGVV E++ G P
Sbjct: 165 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 106/258 (41%), Gaps = 27/258 (10%)
Query: 608 TNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQ--EGSLQGEKEFLTEIQFLSRLHH 664
+++F + +G+G YG V P G +VA+K+ + + L + L EI+ L H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRT-LREIKILKHFKH 68
Query: 665 RNLVSLVGYCDEEG-----EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRG 719
N++++ + E ++ E M R S + L + R
Sbjct: 69 ENIITIFNIQRPDSFENFNEVYIIQELMQTDLHR----VISTQMLSDDHIQYFIYQTLRA 124
Query: 720 ILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVS---TV 776
+ LH V HRD+K SN+L++ KV DFGL+R+ + P T
Sbjct: 125 VKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTE 181
Query: 777 VKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSM 835
T Y PE LT K + DV+S G + EL +PI G+ + +Q +
Sbjct: 182 YVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPIFPGR------DYRHQLLL 234
Query: 836 MFSVIDGNMGSYPSECVE 853
+F +I C+E
Sbjct: 235 IFGIIGTPHSDNDLRCIE 252
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 122/283 (43%), Gaps = 50/283 (17%)
Query: 559 VTISAIVSLLIVRAHMKNYHAISRRRHSSKTSIKIDGVRSFT--YGEMALATNNFNSSTQ 616
+++ ++ +L+ ++ A+ R ++ ++ ++ + FT EM L +F
Sbjct: 41 LSVETLLDVLVCLYTECSHSALRRDKYVAEF---LEWAKPFTQLVKEMQLHREDFEIIKV 97
Query: 617 IGQGGYGKVYKGILPDGTVV----------AVKRAQEGSLQGEKEFLT--EIQFLSRLHH 664
IG+G +G+V + + + +KRA+ + E++ L + Q+++ LH+
Sbjct: 98 IGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQWITALHY 157
Query: 665 RNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSA-KSKEPLGFAM----RLSIALGSSRG 719
+E LV ++ G L LS + K P A + +A+ S
Sbjct: 158 A--------FQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQ 209
Query: 720 ILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKG 779
+ Y+H RDIK N+LLD ++ADFG S L D G V S+V G
Sbjct: 210 LHYVH---------RDIKPDNVLLDVNGHIRLADFG-SCLKMNDD--GTVQ---SSVAVG 254
Query: 780 TPGYLDPEYFLTH-----KLTDKSDVYSLGVVFLELLTGMQPI 817
TP Y+ PE K + D +SLGV E+L G P
Sbjct: 255 TPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPF 297
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 98/225 (43%), Gaps = 22/225 (9%)
Query: 606 LATNNFNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSL---QGEKEFLTEIQFLSR 661
L N+F+ IG+GG+G+VY D G + A+K + + QGE L E LS
Sbjct: 185 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSL 244
Query: 662 LHHRN--LVSLVGYCDEEGEQM-LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSR 718
+ + + + Y +++ + + M+ G L LS G + ++
Sbjct: 245 VSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQH-----GVFSEADMRFYAAE 299
Query: 719 GILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVK 778
IL L + V +RD+K +NILLD +++D GL+ D P H S
Sbjct: 300 IILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA-----CDFSKKKP-HASV--- 350
Query: 779 GTPGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLTGMQPISHGKN 822
GT GY+ PE D S D +SLG + +LL G P K
Sbjct: 351 GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKT 395
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 98/225 (43%), Gaps = 22/225 (9%)
Query: 606 LATNNFNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSL---QGEKEFLTEIQFLSR 661
L N+F+ IG+GG+G+VY D G + A+K + + QGE L E LS
Sbjct: 186 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSL 245
Query: 662 LHHRN--LVSLVGYCDEEGEQM-LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSR 718
+ + + + Y +++ + + M+ G L LS G + ++
Sbjct: 246 VSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQH-----GVFSEADMRFYAAE 300
Query: 719 GILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVK 778
IL L + V +RD+K +NILLD +++D GL+ D P H S
Sbjct: 301 IILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA-----CDFSKKKP-HASV--- 351
Query: 779 GTPGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLTGMQPISHGKN 822
GT GY+ PE D S D +SLG + +LL G P K
Sbjct: 352 GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKT 396
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 91/221 (41%), Gaps = 26/221 (11%)
Query: 606 LATNNFNSSTQIGQGGYGKVYKGIL----PDGTVVAVKRAQEGSLQGEKEF---LTEIQF 658
+ N+F+ +G+G +GKV IL G A+K ++ + + E +TE +
Sbjct: 7 VTMNDFDYLKLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRV 63
Query: 659 LSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSS- 717
L H L +L V E+ + G L LS + F + G+
Sbjct: 64 LQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERV----FTEERARFYGAEI 119
Query: 718 -RGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTV 776
+ YLH+ V +RDIK N++LD K+ DFGL + EGI
Sbjct: 120 VSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK-------EGISDGATMKX 169
Query: 777 VKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPI 817
GTP YL PE + D + LGVV E++ G P
Sbjct: 170 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 210
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 98/225 (43%), Gaps = 22/225 (9%)
Query: 606 LATNNFNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSL---QGEKEFLTEIQFLSR 661
L N+F+ IG+GG+G+VY D G + A+K + + QGE L E LS
Sbjct: 186 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSL 245
Query: 662 LHHRN--LVSLVGYCDEEGEQM-LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSR 718
+ + + + Y +++ + + M+ G L LS G + ++
Sbjct: 246 VSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQH-----GVFSEADMRFYAAE 300
Query: 719 GILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVK 778
IL L + V +RD+K +NILLD +++D GL+ D P H S
Sbjct: 301 IILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA-----CDFSKKKP-HASV--- 351
Query: 779 GTPGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLTGMQPISHGKN 822
GT GY+ PE D S D +SLG + +LL G P K
Sbjct: 352 GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKT 396
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 98/225 (43%), Gaps = 22/225 (9%)
Query: 606 LATNNFNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSL---QGEKEFLTEIQFLSR 661
L N+F+ IG+GG+G+VY D G + A+K + + QGE L E LS
Sbjct: 186 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSL 245
Query: 662 LHHRN--LVSLVGYCDEEGEQM-LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSR 718
+ + + + Y +++ + + M+ G L LS G + ++
Sbjct: 246 VSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQH-----GVFSEADMRFYAAE 300
Query: 719 GILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVK 778
IL L + V +RD+K +NILLD +++D GL+ D P H S
Sbjct: 301 IILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA-----CDFSKKKP-HASV--- 351
Query: 779 GTPGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLTGMQPISHGKN 822
GT GY+ PE D S D +SLG + +LL G P K
Sbjct: 352 GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKT 396
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 94/208 (45%), Gaps = 26/208 (12%)
Query: 617 IGQGGYGKVY--KGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYC 674
+G G + +V+ K L G + A+K ++ + EI L ++ H N+V+L
Sbjct: 17 LGSGAFSEVFLVKQRLT-GKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIY 75
Query: 675 DEEGEQMLVYEFMSNGTLRDQLSAK---SKEPLGFAMRLSIALGSSRGILYLHTEADPPV 731
+ LV + +S G L D++ + +++ ++ ++ + YLH +
Sbjct: 76 ESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLS-----AVKYLHENG---I 127
Query: 732 FHRDIKASNILL---DHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEY 788
HRD+K N+L + + DFGLS++ + GI+ + GTPGY+ PE
Sbjct: 128 VHRDLKPENLLYLTPEENSKIMITDFGLSKM----EQNGIM-----STACGTPGYVAPEV 178
Query: 789 FLTHKLTDKSDVYSLGVVFLELLTGMQP 816
+ D +S+GV+ LL G P
Sbjct: 179 LAQKPYSKAVDCWSIGVITYILLCGYPP 206
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 91/221 (41%), Gaps = 26/221 (11%)
Query: 606 LATNNFNSSTQIGQGGYGKVYKGIL----PDGTVVAVKRAQEGSLQGEKEF---LTEIQF 658
+ N+F+ +G+G +GKV IL G A+K ++ + + E +TE +
Sbjct: 2 VTMNDFDYLKLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRV 58
Query: 659 LSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSS- 717
L H L +L V E+ + G L LS + F + G+
Sbjct: 59 LQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERV----FTEERARFYGAEI 114
Query: 718 -RGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTV 776
+ YLH+ V +RDIK N++LD K+ DFGL + EGI
Sbjct: 115 VSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK-------EGISDGATMKX 164
Query: 777 VKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPI 817
GTP YL PE + D + LGVV E++ G P
Sbjct: 165 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 91/221 (41%), Gaps = 26/221 (11%)
Query: 606 LATNNFNSSTQIGQGGYGKVYKGIL----PDGTVVAVKRAQEGSLQGEKEF---LTEIQF 658
+ N+F+ +G+G +GKV IL G A+K ++ + + E +TE +
Sbjct: 2 VTMNDFDYLKLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRV 58
Query: 659 LSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSS- 717
L H L +L V E+ + G L LS + F + G+
Sbjct: 59 LQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERV----FTEERARFYGAEI 114
Query: 718 -RGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTV 776
+ YLH+ V +RDIK N++LD K+ DFGL + EGI
Sbjct: 115 VSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK-------EGISDGATMKX 164
Query: 777 VKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPI 817
GTP YL PE + D + LGVV E++ G P
Sbjct: 165 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 91/221 (41%), Gaps = 26/221 (11%)
Query: 606 LATNNFNSSTQIGQGGYGKVYKGIL----PDGTVVAVKRAQEGSLQGEKEF---LTEIQF 658
+ N+F+ +G+G +GKV IL G A+K ++ + + E +TE +
Sbjct: 2 VTMNDFDYLKLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRV 58
Query: 659 LSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSS- 717
L H L +L V E+ + G L LS + F + G+
Sbjct: 59 LQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERV----FTEERARFYGAEI 114
Query: 718 -RGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTV 776
+ YLH+ V +RDIK N++LD K+ DFGL + EGI
Sbjct: 115 VSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK-------EGISDGATMKX 164
Query: 777 VKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPI 817
GTP YL PE + D + LGVV E++ G P
Sbjct: 165 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 106/243 (43%), Gaps = 26/243 (10%)
Query: 655 EIQFLSRL-HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKS--KEPLGFAMRLS 711
EI+ L R H N+++L D+ +V E M G L D++ + E A+ +
Sbjct: 65 EIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFT 124
Query: 712 IALGSSRGILYLHTEADPPVFHRDIKASNILL----DHKFTAKVADFGLSRLAPVPDIEG 767
I ++ + YLH + V HRD+K SNIL + + ++ DFG ++ +
Sbjct: 125 I----TKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLL 177
Query: 768 IVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREV 827
+ P + T ++ PE D++SLGV+ +LTG P ++G + E
Sbjct: 178 MTPCY-------TANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEE 230
Query: 828 NIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI-WNM 886
+A S FS+ G Y + + L K + R + + V+R + W+
Sbjct: 231 ILARIGSGKFSL----SGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWIVHWDQ 286
Query: 887 MPE 889
+P+
Sbjct: 287 LPQ 289
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 114/267 (42%), Gaps = 42/267 (15%)
Query: 609 NNFNSSTQIGQGGYGKVYKGIL--PDGTVVAVKRAQEGSLQGEKEFL------------- 653
N++ + QG + K+ IL D A+K+ ++ L+ +++F
Sbjct: 31 NDYRIIRTLNQGKFNKI---ILCEKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKY 87
Query: 654 ----TEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLR--DQLSAKSKEPLGFA 707
E+Q ++ + + ++ G E ++YE+M N ++ D+ +
Sbjct: 88 DDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCF 147
Query: 708 MRLSIALGSSRGIL----YLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 763
+ + + + +L Y+H E + + HRD+K SNIL+D K++DFG S
Sbjct: 148 IPIQVIKCIIKSVLNSFSYIHNEKN--ICHRDVKPSNILMDKNGRVKLSDFGESEYMVDK 205
Query: 764 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTD--KSDVYSLGVVFLELLTGMQPISHGK 821
I+G +GT ++ PE+F + K D++SLG+ + + P S
Sbjct: 206 KIKG---------SRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKI 256
Query: 822 NIVREVNIAYQSSMMFSVIDGNMGSYP 848
++V N ++ + +D N YP
Sbjct: 257 SLVELFNNIRTKNIEYP-LDRNHFLYP 282
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 122/287 (42%), Gaps = 40/287 (13%)
Query: 609 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNL 667
N T++ + G+++KG + VV V + ++ S + ++F E L H N+
Sbjct: 10 KQLNFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNV 69
Query: 668 VSLVGYCDE--EGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHT 725
+ ++G C L+ +M G+L + L + + + + AL +RG+ +LHT
Sbjct: 70 LPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHT 129
Query: 726 EADPPVFHRDIKASNILLDHKFTAKV--ADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGY 783
+P + + + ++++D TA++ AD S +P G + A P +
Sbjct: 130 -LEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQSP-----GRMYA---------PAW 174
Query: 784 LDPEYFLTHKLTD----KSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSM---M 836
+ PE L K D +D++S V+ EL+T REV A S+M M
Sbjct: 175 VAPEA-LQKKPEDTNRRSADMWSFAVLLWELVT------------REVPFADLSNMEIGM 221
Query: 837 FSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883
++G + P KL C ++ RP ++ LE +
Sbjct: 222 KVALEGLRPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKM 268
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 119/284 (41%), Gaps = 31/284 (10%)
Query: 611 FNSSTQIGQGGYGKVYKGILPD--------GTVVAVKRAQEGSLQGEKEFLTEIQFLSRL 662
FN S +GQG + K++KG+ + T V +K + + F +S+L
Sbjct: 12 FNES--LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKL 69
Query: 663 HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILY 722
H++LV G C E +LV EF+ G+L D K+K + +L +A + + +
Sbjct: 70 SHKHLVLNYGVCVCGDENILVQEFVKFGSL-DTYLKKNKNCINILWKLEVAKQLAAAMHF 128
Query: 723 LHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPG 782
L + H ++ A NILL + K + +L+ ++P +++
Sbjct: 129 LEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLP---KDILQERIP 182
Query: 783 YLDPEYFLTHK-LTDKSDVYSLGVVFLELLTGM-QPISHGKNIVREVNIAYQSSMMFSVI 840
++ PE K L +D +S G E+ +G +P+S + Q + F
Sbjct: 183 WVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLS---------ALDSQRKLQFY-- 231
Query: 841 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIW 884
+ P+ + L C E D RPS ++R+L S++
Sbjct: 232 -EDRHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLF 274
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 119/284 (41%), Gaps = 31/284 (10%)
Query: 611 FNSSTQIGQGGYGKVYKGILPD--------GTVVAVKRAQEGSLQGEKEFLTEIQFLSRL 662
FN S +GQG + K++KG+ + T V +K + + F +S+L
Sbjct: 12 FNES--LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKL 69
Query: 663 HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILY 722
H++LV G C E +LV EF+ G+L D K+K + +L +A + + +
Sbjct: 70 SHKHLVLNYGVCFCGDENILVQEFVKFGSL-DTYLKKNKNCINILWKLEVAKQLAWAMHF 128
Query: 723 LHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPG 782
L + H ++ A NILL + K + +L+ ++P +++
Sbjct: 129 LEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLP---KDILQERIP 182
Query: 783 YLDPEYFLTHK-LTDKSDVYSLGVVFLELLTGM-QPISHGKNIVREVNIAYQSSMMFSVI 840
++ PE K L +D +S G E+ +G +P+S + Q + F
Sbjct: 183 WVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLS---------ALDSQRKLQFY-- 231
Query: 841 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIW 884
+ P+ + L C E D RPS ++R+L S++
Sbjct: 232 -EDRHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLF 274
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 92/214 (42%), Gaps = 28/214 (13%)
Query: 617 IGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD 675
+G GG G V+ + D VA+K+ Q K L EI+ + RL H N+V +
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILG 78
Query: 676 EEGEQM--------------LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGIL 721
G Q+ +V E+M D + + PL RG+
Sbjct: 79 PSGSQLTDDVGSLTELNSVYIVQEYMET----DLANVLEQGPLLEEHARLFMYQLLRGLK 134
Query: 722 YLHTEADPPVFHRDIKASNILLD-HKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGT 780
Y+H+ V HRD+K +N+ ++ K+ DFGL+R+ D H+S + T
Sbjct: 135 YIHSAN---VLHRDLKPANLFINTEDLVLKIGDFGLARIM---DPHYSHKGHLSEGLV-T 187
Query: 781 PGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTG 813
Y P L+ + T D+++ G +F E+LTG
Sbjct: 188 KWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTG 221
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 81/184 (44%), Gaps = 30/184 (16%)
Query: 653 LTEIQFLSRLH-HRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAK---SKEPLGFAM 708
L E+ L ++ H N++ L + LV++ M G L D L+ K S++ M
Sbjct: 58 LKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIM 117
Query: 709 RLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLS-RLAPVPDIEG 767
R + + I LH + HRD+K NILLD K+ DFG S +L P +
Sbjct: 118 RALLEV-----ICALHKLN---IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRE 169
Query: 768 IVPAHVSTVVKGTPGYLDPEYFLTHKLTD-------KSDVYSLGVVFLELLTGMQPISHG 820
+ GTP YL PE + + D + D++S GV+ LL G P H
Sbjct: 170 VC---------GTPSYLAPE-IIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHR 219
Query: 821 KNIV 824
K ++
Sbjct: 220 KQML 223
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 81/184 (44%), Gaps = 30/184 (16%)
Query: 653 LTEIQFLSRLH-HRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAK---SKEPLGFAM 708
L E+ L ++ H N++ L + LV++ M G L D L+ K S++ M
Sbjct: 71 LKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIM 130
Query: 709 RLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLS-RLAPVPDIEG 767
R + + I LH + HRD+K NILLD K+ DFG S +L P +
Sbjct: 131 RALLEV-----ICALHKLN---IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRS 182
Query: 768 IVPAHVSTVVKGTPGYLDPEYFLTHKLTD-------KSDVYSLGVVFLELLTGMQPISHG 820
+ GTP YL PE + + D + D++S GV+ LL G P H
Sbjct: 183 VC---------GTPSYLAPE-IIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHR 232
Query: 821 KNIV 824
K ++
Sbjct: 233 KQML 236
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 108/248 (43%), Gaps = 50/248 (20%)
Query: 617 IGQGGYGKVYKGILP-DGTVVAVKRAQE--GSLQGEKEFLTEIQFLSRLHHRNLVSLVGY 673
IG G YG V + + VVA+K+ L K L EI L+RL+H ++V ++
Sbjct: 61 IGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDI 120
Query: 674 C----DEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIA---LGSSRGILYLHTE 726
E+ +++ V +++ + + P+ + L I G+ Y+H+
Sbjct: 121 VIPKDVEKFDELYVVLEIADSDFKKLF----RTPV-YLTELHIKTLLYNLLVGVKYVHSA 175
Query: 727 ADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP--------------DIEGIVPAH 772
+ HRD+K +N L++ + KV DFGL+R P D+ + H
Sbjct: 176 G---ILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPH 232
Query: 773 VSTVVKGTPG------YLDPEYFLTHK-LTDKSDVYSLGVVFLELLTGMQPISHGKNIVR 825
+ + G Y PE L + T+ DV+S+G +F ELL N+++
Sbjct: 233 TKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELL----------NMIK 282
Query: 826 EVNIAYQS 833
E N+AY +
Sbjct: 283 E-NVAYHA 289
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 101/237 (42%), Gaps = 45/237 (18%)
Query: 603 EMALATNNFNSSTQIGQGGYGKVYKGILPDGTVV----------AVKRAQEGSLQGEKEF 652
+M L +F IG+G +G+V L + V +KRA+ + E++
Sbjct: 68 QMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDV 127
Query: 653 LT--EIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNG---TLRDQLSAKSKEPLG-- 705
L + ++++ LH+ ++ LV ++ G TL + + E +
Sbjct: 128 LVNGDSKWITTLHYA--------FQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARF 179
Query: 706 FAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 765
+ + IA+ S + Y+H RDIK NIL+D ++ADFG S L + D
Sbjct: 180 YLAEMVIAIDSVHQLHYVH---------RDIKPDNILMDMNGHIRLADFG-SCLKLMED- 228
Query: 766 EGIVPAHVSTVVKGTPGYLDPEYFLTH-----KLTDKSDVYSLGVVFLELLTGMQPI 817
G V S+V GTP Y+ PE + + D +SLGV E+L G P
Sbjct: 229 -GTVQ---SSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPF 281
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 99/267 (37%), Gaps = 56/267 (20%)
Query: 599 FTYGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTVV-AVKRAQEGSL-----QGEKEF 652
F G + ++ IGQG YG V I + A+K + + + +
Sbjct: 16 FQGGSLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERI 75
Query: 653 LTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSA-------------- 698
TE++ + +LHH N+ L ++E LV E G L D+L+
Sbjct: 76 KTEVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVV 135
Query: 699 --------------------KSKEPLGFAMRLSIALGSSRGIL----YLHTEADPPVFHR 734
+E L F R + R I YLH + + HR
Sbjct: 136 KTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQG---ICHR 192
Query: 735 DIKASNILL--DHKFTAKVADFGLSR-LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT 791
DIK N L + F K+ DFGLS+ + + E + T GTP ++ PE T
Sbjct: 193 DIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGE----YYGMTTKAGTPYFVAPEVLNT 248
Query: 792 --HKLTDKSDVYSLGVVFLELLTGMQP 816
K D +S GV+ LL G P
Sbjct: 249 TNESYGPKCDAWSAGVLLHLLLMGAVP 275
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 81/184 (44%), Gaps = 30/184 (16%)
Query: 653 LTEIQFLSRLH-HRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAK---SKEPLGFAM 708
L E+ L ++ H N++ L + LV++ M G L D L+ K S++ M
Sbjct: 71 LKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIM 130
Query: 709 RLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLS-RLAPVPDIEG 767
R + + I LH + HRD+K NILLD K+ DFG S +L P +
Sbjct: 131 RALLEV-----ICALHKLN---IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRE 182
Query: 768 IVPAHVSTVVKGTPGYLDPEYFLTHKLTD-------KSDVYSLGVVFLELLTGMQPISHG 820
+ GTP YL PE + + D + D++S GV+ LL G P H
Sbjct: 183 VC---------GTPSYLAPE-IIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHR 232
Query: 821 KNIV 824
K ++
Sbjct: 233 KQML 236
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 100/223 (44%), Gaps = 29/223 (13%)
Query: 611 FNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSL 670
+ + IG G +G V++ L + VA+K+ LQ ++ E+Q + + H N+V L
Sbjct: 42 YTNCKVIGNGSFGVVFQAKLVESDEVAIKKV----LQDKRFKNRELQIMRIVKHPNVVDL 97
Query: 671 VGYCDEEGEQM------LVYEFMSNGTLR-DQLSAKSKEPLGFAMRLSIALGSSRGILYL 723
+ G++ LV E++ R + AK K+ + + R + Y+
Sbjct: 98 KAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYI 157
Query: 724 HTEADPPVFHRDIKASNILLD-HKFTAKVADFGLSR--LAPVPDIEGIVPAHVSTVVKGT 780
H+ + HRDIK N+LLD K+ DFG ++ +A P++ I +
Sbjct: 158 HSIG---ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSRY-------- 206
Query: 781 PGYLDPEY-FLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKN 822
Y PE F T D++S G V EL+ G QP+ G++
Sbjct: 207 --YRAPELIFGATNYTTNIDIWSTGCVMAELMQG-QPLFPGES 246
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 88/197 (44%), Gaps = 23/197 (11%)
Query: 655 EIQFLSRL-HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAK---SKEPLGFAMRL 710
EI+ L R H N+++L D+ LV E M G L D++ + S+ F +
Sbjct: 70 EIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLH- 128
Query: 711 SIALGSSRGILYLHTEADPPVFHRDIKASNILL----DHKFTAKVADFGLSRLAPVPDIE 766
+G + + YLH++ V HRD+K SNIL + ++ DFG ++ +
Sbjct: 129 --TIGKT--VEYLHSQG---VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGL 181
Query: 767 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVRE 826
+ P + T ++ PE + D++SLG++ +L G P ++G + E
Sbjct: 182 LMTPCY-------TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPE 234
Query: 827 VNIAYQSSMMFSVIDGN 843
+ S F++ GN
Sbjct: 235 EILTRIGSGKFTLSGGN 251
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 88/197 (44%), Gaps = 23/197 (11%)
Query: 655 EIQFLSRL-HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAK---SKEPLGFAMRL 710
EI+ L R H N+++L D+ LV E M G L D++ + S+ F +
Sbjct: 70 EIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLH- 128
Query: 711 SIALGSSRGILYLHTEADPPVFHRDIKASNILL----DHKFTAKVADFGLSRLAPVPDIE 766
+G + + YLH++ V HRD+K SNIL + ++ DFG ++ +
Sbjct: 129 --TIGKT--VEYLHSQG---VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGL 181
Query: 767 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVRE 826
+ P + T ++ PE + D++SLG++ +L G P ++G + E
Sbjct: 182 LMTPCY-------TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPE 234
Query: 827 VNIAYQSSMMFSVIDGN 843
+ S F++ GN
Sbjct: 235 EILTRIGSGKFTLSGGN 251
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 94/215 (43%), Gaps = 27/215 (12%)
Query: 617 IGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSR--LHHRNLVSLVG-- 672
+G+G YG+V++G G VAVK S + EK + E + + L H N++ +
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVKIF---SSRDEKSWFRETELYNTVMLRHENILGFIASD 71
Query: 673 -YCDEEGEQM-LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLH-----T 725
Q+ L+ + G+L D L + + + L I L + G+ +LH T
Sbjct: 72 MTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSC---LRIVLSIASGLAHLHIEIFGT 128
Query: 726 EADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLD 785
+ P + HRD+K+ NIL+ +AD GL+ + + V + GT Y+
Sbjct: 129 QGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV---GTKRYMA 185
Query: 786 PEYFLTHKLTD------KSDVYSLGVVFLELLTGM 814
PE D + D+++ G+V E+ M
Sbjct: 186 PEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRM 220
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 94/215 (43%), Gaps = 27/215 (12%)
Query: 617 IGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSR--LHHRNLVSLVG-- 672
+G+G YG+V++G G VAVK S + EK + E + + L H N++ +
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVKIF---SSRDEKSWFRETELYNTVMLRHENILGFIASD 71
Query: 673 -YCDEEGEQM-LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLH-----T 725
Q+ L+ + G+L D L + + + L I L + G+ +LH T
Sbjct: 72 MTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSC---LRIVLSIASGLAHLHIEIFGT 128
Query: 726 EADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLD 785
+ P + HRD+K+ NIL+ +AD GL+ + + V + GT Y+
Sbjct: 129 QGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV---GTKRYMA 185
Query: 786 PEYFLTHKLTD------KSDVYSLGVVFLELLTGM 814
PE D + D+++ G+V E+ M
Sbjct: 186 PEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRM 220
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 94/215 (43%), Gaps = 27/215 (12%)
Query: 617 IGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSR--LHHRNLVSLVG-- 672
+G+G YG+V++G G VAVK S + EK + E + + L H N++ +
Sbjct: 45 VGKGRYGEVWRGSW-QGENVAVKIF---SSRDEKSWFRETELYNTVMLRHENILGFIASD 100
Query: 673 -YCDEEGEQM-LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLH-----T 725
Q+ L+ + G+L D L + + + L I L + G+ +LH T
Sbjct: 101 MTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSC---LRIVLSIASGLAHLHIEIFGT 157
Query: 726 EADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLD 785
+ P + HRD+K+ NIL+ +AD GL+ + + V + GT Y+
Sbjct: 158 QGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV---GTKRYMA 214
Query: 786 PEYFLTHKLTD------KSDVYSLGVVFLELLTGM 814
PE D + D+++ G+V E+ M
Sbjct: 215 PEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRM 249
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 104/228 (45%), Gaps = 36/228 (15%)
Query: 616 QIGQGGYGKVYKGILPDGTVV---AVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSL-- 670
++G+G YG VYK DG A+K+ + + EI L L H N++SL
Sbjct: 28 KVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSA--CREIALLRELKHPNVISLQK 85
Query: 671 VGYCDEEGEQMLVYEFMSNGTLR----DQLSAKSKEPLGF--AMRLSIALGSSRGILYLH 724
V + + L++++ + + S +K+P+ M S+ GI YLH
Sbjct: 86 VFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLH 145
Query: 725 TEADPPVFHRDIKASNILL----DHKFTAKVADFGLSR-----LAPVPDIEGIVPAHVST 775
V HRD+K +NIL+ + K+AD G +R L P+ D++ +V
Sbjct: 146 ANW---VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVV------ 196
Query: 776 VVKGTPGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLTGMQPISHGKN 822
T Y PE L + K+ D++++G +F ELLT +PI H +
Sbjct: 197 ---VTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTS-EPIFHCRQ 240
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 122/299 (40%), Gaps = 37/299 (12%)
Query: 595 GVRSFTYGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRA--QEGSLQGEKEF 652
G + + M++ ++ QIG GG KV++ + + A+K +E Q +
Sbjct: 14 GTENLYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSY 73
Query: 653 LTEIQFLSRL--HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRL 710
EI +L++L H ++ L Y E +Y M G + K K+ + R
Sbjct: 74 RNEIAYLNKLQQHSDKIIRLYDY---EITDQYIYMVMECGNIDLNSWLKKKKSIDPWERK 130
Query: 711 SIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVP 770
S + +H + H D+K +N L+ K+ DFG++ PD +V
Sbjct: 131 SYWKNMLEAVHTIHQHG---IVHSDLKPANFLIVDGML-KLIDFGIANQMQ-PDTTSVVK 185
Query: 771 AHVSTVVKGTPGYLDPEYF-----------LTHKLTDKSDVYSLGVVFLELLTGMQPISH 819
S V GT Y+ PE K++ KSDV+SLG + + G P
Sbjct: 186 D--SQV--GTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ 241
Query: 820 GKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCC-QDETDARPSMSEVM 877
I Q S + ++ID N + EK ++ LKCC + + R S+ E++
Sbjct: 242 ---------IINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 291
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 122/299 (40%), Gaps = 37/299 (12%)
Query: 595 GVRSFTYGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRA--QEGSLQGEKEF 652
G + + M++ ++ QIG GG KV++ + + A+K +E Q +
Sbjct: 14 GTENLYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSY 73
Query: 653 LTEIQFLSRL--HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRL 710
EI +L++L H ++ L Y E +Y M G + K K+ + R
Sbjct: 74 RNEIAYLNKLQQHSDKIIRLYDY---EITDQYIYMVMECGNIDLNSWLKKKKSIDPWERK 130
Query: 711 SIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVP 770
S + +H + H D+K +N L+ K+ DFG++ PD +V
Sbjct: 131 SYWKNMLEAVHTIHQHG---IVHSDLKPANFLIVDGML-KLIDFGIANQMQ-PDXXXVVK 185
Query: 771 AHVSTVVKGTPGYLDPEYF-----------LTHKLTDKSDVYSLGVVFLELLTGMQPISH 819
S V GT Y+ PE K++ KSDV+SLG + + G P
Sbjct: 186 D--SQV--GTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ 241
Query: 820 GKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCC-QDETDARPSMSEVM 877
I Q S + ++ID N + EK ++ LKCC + + R S+ E++
Sbjct: 242 ---------IINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 291
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 54.3 bits (129), Expect = 3e-07, Method: Composition-based stats.
Identities = 60/226 (26%), Positives = 100/226 (44%), Gaps = 36/226 (15%)
Query: 617 IGQGGYGKVYKGI-LPDGTVVAVKRAQE------GSLQGEKEFLTEIQFLSRLHH--RNL 667
+G GG+G VY GI + D VA+K ++ G L E+ L ++ +
Sbjct: 16 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 75
Query: 668 VSLVGYCDEEGEQMLVYEFMSN-GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTE 726
+ L+ + + +L+ E M L D ++ + A++ +A R + E
Sbjct: 76 IRLLDWFERPDSFVLILERMEPVQDLFDFITERG------ALQEELA----RSFFWQVLE 125
Query: 727 A-----DPPVFHRDIKASNILLD-HKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGT 780
A + V HRDIK NIL+D ++ K+ DFG L + V T GT
Sbjct: 126 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL---------LKDTVYTDFDGT 176
Query: 781 PGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLTGMQPISHGKNIVR 825
Y PE+ H+ +S V+SLG++ +++ G P H + I+R
Sbjct: 177 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR 222
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 97/227 (42%), Gaps = 26/227 (11%)
Query: 609 NNFNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNL 667
+ F GQG +G V G G VA+K+ + +E L +Q L+ LHH N+
Sbjct: 23 DRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRE-LQIMQDLAVLHHPNI 81
Query: 668 VSLVGYCDEEGEQ-------MLVYEFMSNG---TLRDQLSAKSKEPLGFAMRLSIALGSS 717
V L Y GE+ +V E++ + R+ + P L S
Sbjct: 82 VQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRS 141
Query: 718 RGILYLHTEADPPVFHRDIKASNILLDHK-FTAKVADFGLSRLAPVPDIEGIVPAHVSTV 776
G L+L + V HRDIK N+L++ T K+ DFG ++ + P+ +
Sbjct: 142 IGCLHLPSVN---VCHRDIKPHNVLVNEADGTLKLCDFGSAK--------KLSPSEPNVA 190
Query: 777 VKGTPGYLDPEY-FLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKN 822
+ Y PE F T D++S+G +F E++ G +PI G N
Sbjct: 191 YICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLG-EPIFRGDN 236
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 101/231 (43%), Gaps = 31/231 (13%)
Query: 609 NNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGE---KEFLTEIQFLSRLHH 664
+ S T +G G YG V I G VA+K+ Q E K E+ L + H
Sbjct: 42 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSR-PFQSEIFAKRAYRELLLLKHMQH 100
Query: 665 RNLVSLVGYCDEEG------EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSR 718
N++ L+ + LV FM + S+E + + + + +
Sbjct: 101 ENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQYLVYQML-----K 155
Query: 719 GILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVK 778
G+ Y+H+ V HRD+K N+ ++ K+ DFGL+R A ++ G V
Sbjct: 156 GLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARHADA-EMTGYVV-------- 203
Query: 779 GTPGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLTGMQPISHGKNIVREVN 828
T Y PE L+ +++ D++S+G + E+LTG + + GK+ + ++
Sbjct: 204 -TRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTG-KTLFKGKDYLDQLT 252
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 103/243 (42%), Gaps = 26/243 (10%)
Query: 655 EIQFLSRL-HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKS--KEPLGFAMRLS 711
EI+ L R H N+++L D+ +V E G L D++ + E A+ +
Sbjct: 65 EIEILLRYGQHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFT 124
Query: 712 IALGSSRGILYLHTEADPPVFHRDIKASNILL----DHKFTAKVADFGLSRLAPVPDIEG 767
I ++ + YLH + V HRD+K SNIL + + ++ DFG ++ +
Sbjct: 125 I----TKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLL 177
Query: 768 IVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREV 827
P + T ++ PE D++SLGV+ LTG P ++G + E
Sbjct: 178 XTPCY-------TANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTPFANGPDDTPEE 230
Query: 828 NIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI-WNM 886
+A S FS+ G Y + + L K + R + + V+R + W+
Sbjct: 231 ILARIGSGKFSL----SGGYWNSVSDTAKDLVSKXLHVDPHQRLTAALVLRHPWIVHWDQ 286
Query: 887 MPE 889
+P+
Sbjct: 287 LPQ 289
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 91/215 (42%), Gaps = 23/215 (10%)
Query: 609 NNFNSSTQIGQGGYGKVY-KGILPDGTVVAVK---RAQEGSLQGEKEFLTEIQFLSRLHH 664
+ F IG G +G+V + G A+K + + L+ + L E + L ++
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 665 RNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLS--AKSKEPLGFAMRLSIALGSSRGILY 722
LV L + +V E+M G + L + EP I L Y
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFE----Y 156
Query: 723 LHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPG 782
LH+ + +RD+K N+L+D + KVADFG ++ ++G + + GTP
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAK-----RVKG-----RTWXLCGTPE 203
Query: 783 YLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPI 817
YL PE L+ D ++LGV+ E+ G P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 53.9 bits (128), Expect = 4e-07, Method: Composition-based stats.
Identities = 57/231 (24%), Positives = 99/231 (42%), Gaps = 46/231 (19%)
Query: 617 IGQGGYGKVYKGI-LPDGTVVAVKRAQE------GSLQGEKEFLTEIQFLSRLHH--RNL 667
+G GG+G VY GI + D VA+K ++ G L E+ L ++ +
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 668 VSLVGYCDEEGEQMLV----------YEFMSN-GTLRDQLSAKSKEPLGFAMRLSIALGS 716
+ L+ + + +L+ ++F++ G L+++L+ S
Sbjct: 72 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR------------SFFWQV 119
Query: 717 SRGILYLHTEADPPVFHRDIKASNILLD-HKFTAKVADFGLSRLAPVPDIEGIVPAHVST 775
+ + H V HRDIK NIL+D ++ K+ DFG L + V T
Sbjct: 120 LEAVRHCHNXG---VLHRDIKDENILIDLNRGELKLIDFGSGAL---------LKDTVYT 167
Query: 776 VVKGTPGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLTGMQPISHGKNIVR 825
GT Y PE+ H+ +S V+SLG++ +++ G P H + I+R
Sbjct: 168 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR 218
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 100/231 (43%), Gaps = 31/231 (13%)
Query: 609 NNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGE---KEFLTEIQFLSRLHH 664
+ S T +G G YG V I G VA+K+ Q E K E+ L + H
Sbjct: 24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSR-PFQSEIFAKRAYRELLLLKHMQH 82
Query: 665 RNLVSLVGYCDEEG------EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSR 718
N++ L+ + LV FM + S+E + + + +
Sbjct: 83 ENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQY-----LVYQMLK 137
Query: 719 GILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVK 778
G+ Y+H+ V HRD+K N+ ++ K+ DFGL+R A ++ G V
Sbjct: 138 GLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARHADA-EMTGYVV-------- 185
Query: 779 GTPGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLTGMQPISHGKNIVREVN 828
T Y PE L+ +++ D++S+G + E+LTG + + GK+ + ++
Sbjct: 186 -TRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTG-KTLFKGKDYLDQLT 234
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 91/215 (42%), Gaps = 23/215 (10%)
Query: 609 NNFNSSTQIGQGGYGKVY-KGILPDGTVVAVK---RAQEGSLQGEKEFLTEIQFLSRLHH 664
+ F IG G +G+V + G A+K + + L+ + L E + L ++
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 665 RNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLS--AKSKEPLGFAMRLSIALGSSRGILY 722
LV L + +V E+M G + L + EP I L Y
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFE----Y 156
Query: 723 LHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPG 782
LH+ + +RD+K N+L+D + KVADFG ++ ++G + + GTP
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAK-----RVKG-----RTWXLCGTPE 203
Query: 783 YLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPI 817
YL PE L+ D ++LGV+ E+ G P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 96/224 (42%), Gaps = 26/224 (11%)
Query: 599 FTYGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQG--EKEFLTEI 656
+ GE L + F + Q G GK Y KR S +G +E E+
Sbjct: 7 YEMGE-ELGSGQFAIVRKCRQKGTGKEY------AAKFIKKRRLSSSRRGVSREEIEREV 59
Query: 657 QFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGS 716
L + H N+++L + + + +L+ E +S G L D L+ KE L
Sbjct: 60 NILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLA--EKESLTEDEATQFLKQI 117
Query: 717 SRGILYLHTEADPPVFHRDIKASNILLDHKFT----AKVADFGLSRLAPVPDIEGIVPAH 772
G+ YLH++ + H D+K NI+L K K+ DFG++ I +
Sbjct: 118 LDGVHYLHSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH--------KIEAGN 166
Query: 773 VSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQP 816
+ GTP ++ PE L ++D++S+GV+ LL+G P
Sbjct: 167 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 210
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 96/231 (41%), Gaps = 46/231 (19%)
Query: 617 IGQGGYGKVYKGI-LPDGTVVAVKRAQE------GSLQGEKEFLTEIQFLSRLH--HRNL 667
+G GG+G VY GI + D VA+K ++ G L E+ L ++ +
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 668 VSLVGYCDEEGEQMLVYE-----------FMSNGTLRDQLSAKSKEPLGFAMRLSIALGS 716
+ L+ + + +L+ E G L+++L+ + A+R G
Sbjct: 104 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG- 162
Query: 717 SRGILYLHTEADPPVFHRDIKASNILLD-HKFTAKVADFGLSRLAPVPDIEGIVPAHVST 775
V HRDIK NIL+D ++ K+ DFG L + V T
Sbjct: 163 --------------VLHRDIKDENILIDLNRGELKLIDFGSGAL---------LKDTVYT 199
Query: 776 VVKGTPGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLTGMQPISHGKNIVR 825
GT Y PE+ H+ +S V+SLG++ +++ G P H + I+R
Sbjct: 200 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR 250
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 102/241 (42%), Gaps = 37/241 (15%)
Query: 608 TNNFNSSTQIGQGGYG--KVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHR 665
++ ++ IG G +G ++ + L +VAVK + G+ E EI L H
Sbjct: 19 SDRYDFVKDIGSGNFGVARLMRDKL-TKELVAVKYIERGAAIDEN-VQREIINHRSLRHP 76
Query: 666 NLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLS-----AKSKEPLGFAMRLSIALGSSRGI 720
N+V ++ E+ S G L +++ ++ + F LS G+
Sbjct: 77 NIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLS-------GV 129
Query: 721 LYLHTEADPPVFHRDIKASNILLDHKFTA--KVADFGLSRLAPVPDIEGIVPAHVSTVVK 778
Y H+ + HRD+K N LLD K+ DFG S+ ++ + + V
Sbjct: 130 SYCHSMQ---ICHRDLKLENTLLDGSPAPRLKICDFGYSK-------SSVLHSQPKSTV- 178
Query: 779 GTPGYLDPEYFLTHKLTDK-SDVYSLGVVFLELLTGM-------QPISHGKNIVREVNIA 830
GTP Y+ PE L + K +DV+S GV +L G +P + K I R +++
Sbjct: 179 GTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVK 238
Query: 831 Y 831
Y
Sbjct: 239 Y 239
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 98/239 (41%), Gaps = 46/239 (19%)
Query: 609 NNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQE------GSLQGEKEFLTEIQFLSR 661
+ + +G GG+G VY GI + D VA+K ++ G L E+ L +
Sbjct: 23 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 82
Query: 662 LH--HRNLVSLVGYCDEEGEQMLVYE-----------FMSNGTLRDQLSAKSKEPLGFAM 708
+ ++ L+ + + +L+ E G L+++L+ + A+
Sbjct: 83 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 142
Query: 709 RLSIALGSSRGILYLHTEADPPVFHRDIKASNILLD-HKFTAKVADFGLSRLAPVPDIEG 767
R G V HRDIK NIL+D ++ K+ DFG L
Sbjct: 143 RHCHNCG---------------VLHRDIKDENILIDLNRGELKLIDFGSGAL-------- 179
Query: 768 IVPAHVSTVVKGTPGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLTGMQPISHGKNIVR 825
+ V T GT Y PE+ H+ +S V+SLG++ +++ G P H + I+R
Sbjct: 180 -LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR 237
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 98/239 (41%), Gaps = 46/239 (19%)
Query: 609 NNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQE------GSLQGEKEFLTEIQFLSR 661
+ + +G GG+G VY GI + D VA+K ++ G L E+ L +
Sbjct: 23 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 82
Query: 662 LH--HRNLVSLVGYCDEEGEQMLVYE-----------FMSNGTLRDQLSAKSKEPLGFAM 708
+ ++ L+ + + +L+ E G L+++L+ + A+
Sbjct: 83 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 142
Query: 709 RLSIALGSSRGILYLHTEADPPVFHRDIKASNILLD-HKFTAKVADFGLSRLAPVPDIEG 767
R G V HRDIK NIL+D ++ K+ DFG L
Sbjct: 143 RHCHNCG---------------VLHRDIKDENILIDLNRGELKLIDFGSGAL-------- 179
Query: 768 IVPAHVSTVVKGTPGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLTGMQPISHGKNIVR 825
+ V T GT Y PE+ H+ +S V+SLG++ +++ G P H + I+R
Sbjct: 180 -LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR 237
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 96/231 (41%), Gaps = 46/231 (19%)
Query: 617 IGQGGYGKVYKGI-LPDGTVVAVKRAQE------GSLQGEKEFLTEIQFLSRLH--HRNL 667
+G GG+G VY GI + D VA+K ++ G L E+ L ++ +
Sbjct: 59 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 118
Query: 668 VSLVGYCDEEGEQMLVYE-----------FMSNGTLRDQLSAKSKEPLGFAMRLSIALGS 716
+ L+ + + +L+ E G L+++L+ + A+R G
Sbjct: 119 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG- 177
Query: 717 SRGILYLHTEADPPVFHRDIKASNILLD-HKFTAKVADFGLSRLAPVPDIEGIVPAHVST 775
V HRDIK NIL+D ++ K+ DFG L + V T
Sbjct: 178 --------------VLHRDIKDENILIDLNRGELKLIDFGSGAL---------LKDTVYT 214
Query: 776 VVKGTPGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLTGMQPISHGKNIVR 825
GT Y PE+ H+ +S V+SLG++ +++ G P H + I+R
Sbjct: 215 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR 265
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 98/239 (41%), Gaps = 46/239 (19%)
Query: 609 NNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQE------GSLQGEKEFLTEIQFLSR 661
+ + +G GG+G VY GI + D VA+K ++ G L E+ L +
Sbjct: 24 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 83
Query: 662 LH--HRNLVSLVGYCDEEGEQMLVYE-----------FMSNGTLRDQLSAKSKEPLGFAM 708
+ ++ L+ + + +L+ E G L+++L+ + A+
Sbjct: 84 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 143
Query: 709 RLSIALGSSRGILYLHTEADPPVFHRDIKASNILLD-HKFTAKVADFGLSRLAPVPDIEG 767
R G V HRDIK NIL+D ++ K+ DFG L
Sbjct: 144 RHCHNCG---------------VLHRDIKDENILIDLNRGELKLIDFGSGAL-------- 180
Query: 768 IVPAHVSTVVKGTPGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLTGMQPISHGKNIVR 825
+ V T GT Y PE+ H+ +S V+SLG++ +++ G P H + I+R
Sbjct: 181 -LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR 238
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 96/231 (41%), Gaps = 46/231 (19%)
Query: 617 IGQGGYGKVYKGI-LPDGTVVAVKRAQE------GSLQGEKEFLTEIQFLSRLH--HRNL 667
+G GG+G VY GI + D VA+K ++ G L E+ L ++ +
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 76
Query: 668 VSLVGYCDEEGEQMLVYE-----------FMSNGTLRDQLSAKSKEPLGFAMRLSIALGS 716
+ L+ + + +L+ E G L+++L+ + A+R G
Sbjct: 77 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG- 135
Query: 717 SRGILYLHTEADPPVFHRDIKASNILLD-HKFTAKVADFGLSRLAPVPDIEGIVPAHVST 775
V HRDIK NIL+D ++ K+ DFG L + V T
Sbjct: 136 --------------VLHRDIKDENILIDLNRGELKLIDFGSGAL---------LKDTVYT 172
Query: 776 VVKGTPGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLTGMQPISHGKNIVR 825
GT Y PE+ H+ +S V+SLG++ +++ G P H + I+R
Sbjct: 173 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR 223
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 87/208 (41%), Gaps = 29/208 (13%)
Query: 617 IGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGE---KEFLTEIQFLSRLHHRNLVSLVG 672
+G G YG V + G VA+K+ Q E K E++ L + H N++ L+
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYR-PFQSELFAKRAYRELRLLKHMRHENVIGLLD 91
Query: 673 Y------CDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTE 726
D+ + LV FM D E LG + +G+ Y+H
Sbjct: 92 VFTPDETLDDFTDFYLVMPFMGT----DLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAA 147
Query: 727 ADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDP 786
+ HRD+K N+ ++ K+ DFGL+R A ++ G V T Y P
Sbjct: 148 G---IIHRDLKPGNLAVNEDCELKILDFGLARQAD-SEMXGXVV---------TRWYRAP 194
Query: 787 EYFLT-HKLTDKSDVYSLGVVFLELLTG 813
E L + T D++S+G + E++TG
Sbjct: 195 EVILNWMRYTQTVDIWSVGCIMAEMITG 222
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 98/239 (41%), Gaps = 46/239 (19%)
Query: 609 NNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQE------GSLQGEKEFLTEIQFLSR 661
+ + +G GG+G VY GI + D VA+K ++ G L E+ L +
Sbjct: 24 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 83
Query: 662 LH--HRNLVSLVGYCDEEGEQMLVYE-----------FMSNGTLRDQLSAKSKEPLGFAM 708
+ ++ L+ + + +L+ E G L+++L+ + A+
Sbjct: 84 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 143
Query: 709 RLSIALGSSRGILYLHTEADPPVFHRDIKASNILLD-HKFTAKVADFGLSRLAPVPDIEG 767
R G V HRDIK NIL+D ++ K+ DFG L
Sbjct: 144 RHCHNCG---------------VLHRDIKDENILIDLNRGELKLIDFGSGAL-------- 180
Query: 768 IVPAHVSTVVKGTPGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLTGMQPISHGKNIVR 825
+ V T GT Y PE+ H+ +S V+SLG++ +++ G P H + I+R
Sbjct: 181 -LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR 238
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 97/217 (44%), Gaps = 35/217 (16%)
Query: 611 FNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQE--GSLQGEKEFLTEIQFLSRLHHRNL 667
+ + + +G G YG V G VAVK+ S+ K E++ L + H N+
Sbjct: 31 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 90
Query: 668 VSLVGY------CDEEGEQMLVYEFMS---NGTLRDQ-LSAKSKEPLGFAMRLSIALGSS 717
+ L+ +E + LV M N ++ Q L+ + L + +
Sbjct: 91 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL-------- 142
Query: 718 RGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVV 777
RG+ Y+H+ AD + HRD+K SN+ ++ K+ DFGL+R ++ G V
Sbjct: 143 RGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLAR-HTADEMTGYV-------- 190
Query: 778 KGTPGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLTG 813
T Y PE L +++ D++S+G + ELLTG
Sbjct: 191 -ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 226
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 96/224 (42%), Gaps = 26/224 (11%)
Query: 599 FTYGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQG--EKEFLTEI 656
+ GE L + F + Q G GK Y KR S +G +E E+
Sbjct: 14 YEMGE-ELGSGQFAIVRKCRQKGTGKEY------AAKFIKKRRLSSSRRGVSREEIEREV 66
Query: 657 QFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGS 716
L + H N+++L + + + +L+ E +S G L D L+ KE L
Sbjct: 67 NILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLA--EKESLTEDEATQFLKQI 124
Query: 717 SRGILYLHTEADPPVFHRDIKASNILLDHKFT----AKVADFGLSRLAPVPDIEGIVPAH 772
G+ YLH++ + H D+K NI+L K K+ DFG++ I +
Sbjct: 125 LDGVHYLHSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH--------KIEAGN 173
Query: 773 VSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQP 816
+ GTP ++ PE L ++D++S+GV+ LL+G P
Sbjct: 174 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 97/217 (44%), Gaps = 35/217 (16%)
Query: 611 FNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQE--GSLQGEKEFLTEIQFLSRLHHRNL 667
+ + + +G G YG V G VAVK+ S+ K E++ L + H N+
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 668 VSLVGY------CDEEGEQMLVYEFMS---NGTLRDQ-LSAKSKEPLGFAMRLSIALGSS 717
+ L+ +E + LV M N ++ Q L+ + L + +
Sbjct: 84 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQIL-------- 135
Query: 718 RGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVV 777
RG+ Y+H+ AD + HRD+K SN+ ++ K+ DFGL+R ++ G V
Sbjct: 136 RGLKYIHS-AD--IIHRDLKPSNLAVNEDXELKILDFGLARHTD-DEMTGYV-------- 183
Query: 778 KGTPGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLTG 813
T Y PE L +++ D++S+G + ELLTG
Sbjct: 184 -ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 97/217 (44%), Gaps = 35/217 (16%)
Query: 611 FNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQE--GSLQGEKEFLTEIQFLSRLHHRNL 667
+ + + +G G YG V G VAVK+ S+ K E++ L + H N+
Sbjct: 31 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 90
Query: 668 VSLVGY------CDEEGEQMLVYEFMS---NGTLRDQ-LSAKSKEPLGFAMRLSIALGSS 717
+ L+ +E + LV M N ++ Q L+ + L + +
Sbjct: 91 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL-------- 142
Query: 718 RGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVV 777
RG+ Y+H+ AD + HRD+K SN+ ++ K+ DFGL+R ++ G V
Sbjct: 143 RGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLAR-HTADEMTGYV-------- 190
Query: 778 KGTPGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLTG 813
T Y PE L +++ D++S+G + ELLTG
Sbjct: 191 -ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 226
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 97/217 (44%), Gaps = 35/217 (16%)
Query: 611 FNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQE--GSLQGEKEFLTEIQFLSRLHHRNL 667
+ + + +G G YG V G VAVK+ S+ K E++ L + H N+
Sbjct: 20 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 79
Query: 668 VSLVGY------CDEEGEQMLVYEFMS---NGTLRDQ-LSAKSKEPLGFAMRLSIALGSS 717
+ L+ +E + LV M N ++ Q L+ + L + +
Sbjct: 80 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL-------- 131
Query: 718 RGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVV 777
RG+ Y+H+ AD + HRD+K SN+ ++ K+ DFGL+R ++ G V
Sbjct: 132 RGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMAGFV-------- 179
Query: 778 KGTPGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLTG 813
T Y PE L +++ D++S+G + ELLTG
Sbjct: 180 -ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 215
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 98/239 (41%), Gaps = 46/239 (19%)
Query: 609 NNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQE------GSLQGEKEFLTEIQFLSR 661
+ + +G GG+G VY GI + D VA+K ++ G L E+ L +
Sbjct: 51 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 110
Query: 662 LH--HRNLVSLVGYCDEEGEQMLVYE-----------FMSNGTLRDQLSAKSKEPLGFAM 708
+ ++ L+ + + +L+ E G L+++L+ + A+
Sbjct: 111 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 170
Query: 709 RLSIALGSSRGILYLHTEADPPVFHRDIKASNILLD-HKFTAKVADFGLSRLAPVPDIEG 767
R G V HRDIK NIL+D ++ K+ DFG L
Sbjct: 171 RHCHNCG---------------VLHRDIKDENILIDLNRGELKLIDFGSGAL-------- 207
Query: 768 IVPAHVSTVVKGTPGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLTGMQPISHGKNIVR 825
+ V T GT Y PE+ H+ +S V+SLG++ +++ G P H + I+R
Sbjct: 208 -LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR 265
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 98/218 (44%), Gaps = 26/218 (11%)
Query: 611 FNSSTQIGQGGYGKVYK------GILPDGTVVAVKRAQEGSLQG--EKEFLTEIQFLSRL 662
+++ ++G G + V K G+ + KR + S +G ++ E+ L +
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIK-KRRTKSSRRGVSREDIEREVSILKEI 71
Query: 663 HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILY 722
H N+++L + + + +L+ E ++ G L D L+ KE L G+ Y
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLA--EKESLTEEEATEFLKQILNGVYY 129
Query: 723 LHTEADPPVFHRDIKASNI-LLDH---KFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVK 778
LH+ + H D+K NI LLD K K+ DFGL+ I + +
Sbjct: 130 LHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--------KIDFGNEFKNIF 178
Query: 779 GTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQP 816
GTP ++ PE L ++D++S+GV+ LL+G P
Sbjct: 179 GTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 97/217 (44%), Gaps = 35/217 (16%)
Query: 611 FNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQE--GSLQGEKEFLTEIQFLSRLHHRNL 667
+ + + +G G YG V G VAVK+ S+ K E++ L + H N+
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 668 VSLVGY------CDEEGEQMLVYEFMS---NGTLRDQ-LSAKSKEPLGFAMRLSIALGSS 717
+ L+ +E + LV M N ++ Q L+ + L + +
Sbjct: 84 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQIL-------- 135
Query: 718 RGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVV 777
RG+ Y+H+ AD + HRD+K SN+ ++ K+ DFGL+R ++ G V
Sbjct: 136 RGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGYV-------- 183
Query: 778 KGTPGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLTG 813
T Y PE L +++ D++S+G + ELLTG
Sbjct: 184 -ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 97/217 (44%), Gaps = 35/217 (16%)
Query: 611 FNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQE--GSLQGEKEFLTEIQFLSRLHHRNL 667
+ + + +G G YG V G VAVK+ S+ K E++ L + H N+
Sbjct: 31 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 90
Query: 668 VSLVGY------CDEEGEQMLVYEFMS---NGTLRDQ-LSAKSKEPLGFAMRLSIALGSS 717
+ L+ +E + LV M N ++ Q L+ + L + +
Sbjct: 91 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL-------- 142
Query: 718 RGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVV 777
RG+ Y+H+ AD + HRD+K SN+ ++ K+ DFGL+R ++ G V
Sbjct: 143 RGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLAR-HTADEMTGYV-------- 190
Query: 778 KGTPGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLTG 813
T Y PE L +++ D++S+G + ELLTG
Sbjct: 191 -ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 226
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 98/239 (41%), Gaps = 46/239 (19%)
Query: 609 NNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQE------GSLQGEKEFLTEIQFLSR 661
+ + +G GG+G VY GI + D VA+K ++ G L E+ L +
Sbjct: 43 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 102
Query: 662 LH--HRNLVSLVGYCDEEGEQMLVYE-----------FMSNGTLRDQLSAKSKEPLGFAM 708
+ ++ L+ + + +L+ E G L+++L+ + A+
Sbjct: 103 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 162
Query: 709 RLSIALGSSRGILYLHTEADPPVFHRDIKASNILLD-HKFTAKVADFGLSRLAPVPDIEG 767
R G V HRDIK NIL+D ++ K+ DFG L
Sbjct: 163 RHCHNCG---------------VLHRDIKDENILIDLNRGELKLIDFGSGAL-------- 199
Query: 768 IVPAHVSTVVKGTPGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLTGMQPISHGKNIVR 825
+ V T GT Y PE+ H+ +S V+SLG++ +++ G P H + I+R
Sbjct: 200 -LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR 257
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 93/220 (42%), Gaps = 23/220 (10%)
Query: 617 IGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKEFLT---EIQFLSRLHHRNLVSLVG 672
+G+G +GKV VA+K L+ + EI +L L H +++ L
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYD 76
Query: 673 YCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVF 732
+ ++V E+ + G L D + K + R + + I Y H +
Sbjct: 77 VITTPTDIVMVIEY-AGGELFDYIVEKKRMTEDEGRRFFQQIICA--IEYCHRHK---IV 130
Query: 733 HRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH 792
HRD+K N+LLD K+ADFGLS + + + G+P Y PE +
Sbjct: 131 HRDLKPENLLLDDNLNVKIADFGLSNI--------MTDGNFLKTSCGSPNYAAPE-VING 181
Query: 793 KLTD--KSDVYSLGVVFLELLTGMQPISHG--KNIVREVN 828
KL + DV+S G+V +L G P N+ ++VN
Sbjct: 182 KLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVN 221
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 97/217 (44%), Gaps = 35/217 (16%)
Query: 611 FNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQE--GSLQGEKEFLTEIQFLSRLHHRNL 667
+ + + IG G YG V G VAVK+ S+ K E++ L + H N+
Sbjct: 29 YQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 88
Query: 668 VSLVGY------CDEEGEQMLVYEFMS---NGTLRDQ-LSAKSKEPLGFAMRLSIALGSS 717
+ L+ +E + LV M N ++ Q L+ + L + +
Sbjct: 89 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL-------- 140
Query: 718 RGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVV 777
RG+ Y+H+ AD + HRD+K SN+ ++ K+ DFGL+R ++ G V
Sbjct: 141 RGLKYIHS-AD--IIHRDLKPSNLAVNEDXELKILDFGLARHTD-DEMTGYV-------- 188
Query: 778 KGTPGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLTG 813
T Y PE L +++ D++S+G + ELLTG
Sbjct: 189 -ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 224
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 96/224 (42%), Gaps = 26/224 (11%)
Query: 599 FTYGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQG--EKEFLTEI 656
+ GE L + F + Q G GK Y KR S +G +E E+
Sbjct: 28 YEMGE-ELGSGQFAIVRKCRQKGTGKEY------AAKFIKKRRLXSSRRGVSREEIEREV 80
Query: 657 QFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGS 716
L + H N+++L + + + +L+ E +S G L D L+ KE L
Sbjct: 81 NILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLA--EKESLTEDEATQFLKQI 138
Query: 717 SRGILYLHTEADPPVFHRDIKASNILLDHKFT----AKVADFGLSRLAPVPDIEGIVPAH 772
G+ YLH++ + H D+K NI+L K K+ DFG++ I +
Sbjct: 139 LDGVHYLHSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH--------KIEAGN 187
Query: 773 VSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQP 816
+ GTP ++ PE L ++D++S+GV+ LL+G P
Sbjct: 188 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 231
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 97/217 (44%), Gaps = 35/217 (16%)
Query: 611 FNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQE--GSLQGEKEFLTEIQFLSRLHHRNL 667
+ + + +G G YG V G VAVK+ S+ K E++ L + H N+
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 668 VSLVGY------CDEEGEQMLVYEFMS---NGTLRDQ-LSAKSKEPLGFAMRLSIALGSS 717
+ L+ +E + LV M N ++ Q L+ + L + +
Sbjct: 84 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL-------- 135
Query: 718 RGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVV 777
RG+ Y+H+ AD + HRD+K SN+ ++ K+ DFGL+R ++ G V
Sbjct: 136 RGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMAGFV-------- 183
Query: 778 KGTPGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLTG 813
T Y PE L +++ D++S+G + ELLTG
Sbjct: 184 -ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 53.1 bits (126), Expect = 7e-07, Method: Composition-based stats.
Identities = 58/231 (25%), Positives = 100/231 (43%), Gaps = 46/231 (19%)
Query: 617 IGQGGYGKVYKGI-LPDGTVVAVKRAQE------GSLQGEKEFLTEIQFLSRLHH--RNL 667
+G GG+G VY GI + D VA+K ++ G L E+ L ++ +
Sbjct: 15 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 74
Query: 668 VSLVGYCDEEGEQMLV----------YEFMSN-GTLRDQLSAKSKEPLGFAMRLSIALGS 716
+ L+ + + +L+ ++F++ G L+++L+ + A+R G
Sbjct: 75 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG- 133
Query: 717 SRGILYLHTEADPPVFHRDIKASNILLD-HKFTAKVADFGLSRLAPVPDIEGIVPAHVST 775
V HRDIK NIL+D ++ K+ DFG L + V T
Sbjct: 134 --------------VLHRDIKDENILIDLNRGELKLIDFGSGAL---------LKDTVYT 170
Query: 776 VVKGTPGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLTGMQPISHGKNIVR 825
GT Y PE+ H+ +S V+SLG++ +++ G P H + I+R
Sbjct: 171 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR 221
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 53.1 bits (126), Expect = 7e-07, Method: Composition-based stats.
Identities = 58/231 (25%), Positives = 100/231 (43%), Gaps = 46/231 (19%)
Query: 617 IGQGGYGKVYKGI-LPDGTVVAVKRAQE------GSLQGEKEFLTEIQFLSRLHH--RNL 667
+G GG+G VY GI + D VA+K ++ G L E+ L ++ +
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 668 VSLVGYCDEEGEQMLV----------YEFMSN-GTLRDQLSAKSKEPLGFAMRLSIALGS 716
+ L+ + + +L+ ++F++ G L+++L+ + A+R G
Sbjct: 72 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG- 130
Query: 717 SRGILYLHTEADPPVFHRDIKASNILLD-HKFTAKVADFGLSRLAPVPDIEGIVPAHVST 775
V HRDIK NIL+D ++ K+ DFG L + V T
Sbjct: 131 --------------VLHRDIKDENILIDLNRGELKLIDFGSGAL---------LKDTVYT 167
Query: 776 VVKGTPGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLTGMQPISHGKNIVR 825
GT Y PE+ H+ +S V+SLG++ +++ G P H + I+R
Sbjct: 168 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR 218
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 97/217 (44%), Gaps = 35/217 (16%)
Query: 611 FNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQE--GSLQGEKEFLTEIQFLSRLHHRNL 667
+ + + +G G YG V G VAVK+ S+ K E++ L + H N+
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 668 VSLVGY------CDEEGEQMLVYEFMS---NGTLRDQ-LSAKSKEPLGFAMRLSIALGSS 717
+ L+ +E + LV M N ++ Q L+ + L + +
Sbjct: 84 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL-------- 135
Query: 718 RGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVV 777
RG+ Y+H+ AD + HRD+K SN+ ++ K+ DFGL+R ++ G V
Sbjct: 136 RGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMAGFV-------- 183
Query: 778 KGTPGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLTG 813
T Y PE L +++ D++S+G + ELLTG
Sbjct: 184 -ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 98/239 (41%), Gaps = 46/239 (19%)
Query: 609 NNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQE------GSLQGEKEFLTEIQFLSR 661
+ + +G GG+G VY GI + D VA+K ++ G L E+ L +
Sbjct: 56 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 115
Query: 662 LH--HRNLVSLVGYCDEEGEQMLVYE-----------FMSNGTLRDQLSAKSKEPLGFAM 708
+ ++ L+ + + +L+ E G L+++L+ + A+
Sbjct: 116 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 175
Query: 709 RLSIALGSSRGILYLHTEADPPVFHRDIKASNILLD-HKFTAKVADFGLSRLAPVPDIEG 767
R G V HRDIK NIL+D ++ K+ DFG L
Sbjct: 176 RHCHNCG---------------VLHRDIKDENILIDLNRGELKLIDFGSGAL-------- 212
Query: 768 IVPAHVSTVVKGTPGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLTGMQPISHGKNIVR 825
+ V T GT Y PE+ H+ +S V+SLG++ +++ G P H + I+R
Sbjct: 213 -LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR 270
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 98/217 (45%), Gaps = 35/217 (16%)
Query: 611 FNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQE--GSLQGEKEFLTEIQFLSRLHHRNL 667
+ + + +G G YG V G VAVK+ + S+ K E++ L + H N+
Sbjct: 36 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHENV 95
Query: 668 VSLVGY------CDEEGEQMLVYEFMS---NGTLRDQ-LSAKSKEPLGFAMRLSIALGSS 717
+ L+ +E + LV M N ++ Q L+ + L + +
Sbjct: 96 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL-------- 147
Query: 718 RGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVV 777
RG+ Y+H+ AD + HRD+K SN+ ++ K+ DFGL+R ++ G V
Sbjct: 148 RGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGYV-------- 195
Query: 778 KGTPGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLTG 813
T Y PE L +++ D++S+G + ELLTG
Sbjct: 196 -ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 231
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 97/217 (44%), Gaps = 35/217 (16%)
Query: 611 FNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQE--GSLQGEKEFLTEIQFLSRLHHRNL 667
+ + + +G G YG V G VAVK+ S+ K E++ L + H N+
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 668 VSLVGY------CDEEGEQMLVYEFMS---NGTLRDQ-LSAKSKEPLGFAMRLSIALGSS 717
+ L+ +E + LV M N ++ Q L+ + L + +
Sbjct: 84 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL-------- 135
Query: 718 RGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVV 777
RG+ Y+H+ AD + HRD+K SN+ ++ K+ DFGL+R ++ G V
Sbjct: 136 RGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGXV-------- 183
Query: 778 KGTPGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLTG 813
T Y PE L +++ D++S+G + ELLTG
Sbjct: 184 -ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 53.1 bits (126), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 93/212 (43%), Gaps = 37/212 (17%)
Query: 617 IGQGGYGKV---YKGILPDGTVVAVKRAQE--GSLQGEKEFLTEIQFLSRLHHRNLVSLV 671
+G G YG V Y L VAVK+ SL + E++ L L H N++ L+
Sbjct: 28 VGSGAYGSVCSAYDARLRQK--VAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 85
Query: 672 GY------CDEEGEQMLVYEFMS---NGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILY 722
++ E LV M N ++ Q A S E + F + RG+ Y
Sbjct: 86 DVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQ--ALSDEHVQF-----LVYQLLRGLKY 138
Query: 723 LHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPG 782
+H+ + HRD+K SN+ ++ ++ DFGL+R A ++ G V T
Sbjct: 139 IHSAG---IIHRDLKPSNVAVNEDCELRILDFGLARQAD-EEMTGYV---------ATRW 185
Query: 783 YLDPEYFLTHKLTDKS-DVYSLGVVFLELLTG 813
Y PE L +++ D++S+G + ELL G
Sbjct: 186 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLQG 217
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 53.1 bits (126), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 120/291 (41%), Gaps = 54/291 (18%)
Query: 610 NFNSSTQIGQGGYGK-VYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNL 667
+F +G G G VY+G+ D VAVKR E+Q L H N+
Sbjct: 25 SFCPKDVLGHGAEGTIVYRGMF-DNRDVAVKRILPECFSFADR---EVQLLRESDEHPNV 80
Query: 668 VSLVGYCDEEGEQMLVYEF-MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTE 726
+ +C E+ Q + TL++ + K LG +++ ++ G+ +LH+
Sbjct: 81 IRY--FCTEKDRQFQYIAIELCAATLQEYVEQKDFAHLGLEP-ITLLQQTTSGLAHLHSL 137
Query: 727 ADPPVFHRDIKASNILLDH-----KFTAKVADFGL-----------SRLAPVPDIEG-IV 769
+ HRD+K NIL+ K A ++DFGL SR + VP EG I
Sbjct: 138 N---IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIA 194
Query: 770 PAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVN 828
P +S K P Y D++S G VF +++ G P GK++ R+ N
Sbjct: 195 PEMLSEDCKENPTY-------------TVDIFSAGCVFYYVISEGSHPF--GKSLQRQAN 239
Query: 829 IAYQSSMMFSVI-DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMR 878
I + + + + + E +EK I + + RPS V++
Sbjct: 240 ILLGACSLDCLHPEKHEDVIARELIEKMIAM-------DPQKRPSAKHVLK 283
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 53.1 bits (126), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 94/212 (44%), Gaps = 37/212 (17%)
Query: 617 IGQGGYGKV---YKGILPDGTVVAVKRAQE--GSLQGEKEFLTEIQFLSRLHHRNLVSLV 671
+G G YG V Y L VAVK+ SL + E++ L L H N++ L+
Sbjct: 36 VGSGAYGSVCSAYDARLRQK--VAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 672 GY------CDEEGEQMLVYEFMS---NGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILY 722
++ E LV M N ++ Q A S E + F + + RG+ Y
Sbjct: 94 DVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQ--ALSDEHVQFLVYQLL-----RGLKY 146
Query: 723 LHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPG 782
+H+ + HRD+K SN+ ++ ++ DFGL+R A ++ G V T
Sbjct: 147 IHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQAD-EEMTGYV---------ATRW 193
Query: 783 YLDPEYFLTHKLTDKS-DVYSLGVVFLELLTG 813
Y PE L +++ D++S+G + ELL G
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLQG 225
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 53.1 bits (126), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 97/217 (44%), Gaps = 35/217 (16%)
Query: 611 FNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQE--GSLQGEKEFLTEIQFLSRLHHRNL 667
+ + + +G G YG V G VAVK+ S+ K E++ L + H N+
Sbjct: 20 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 79
Query: 668 VSLVGY------CDEEGEQMLVYEFMS---NGTLRDQ-LSAKSKEPLGFAMRLSIALGSS 717
+ L+ +E + LV M N ++ Q L+ + L + +
Sbjct: 80 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL-------- 131
Query: 718 RGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVV 777
RG+ Y+H+ AD + HRD+K SN+ ++ K+ DFGL+R ++ G V
Sbjct: 132 RGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGYV-------- 179
Query: 778 KGTPGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLTG 813
T Y PE L +++ D++S+G + ELLTG
Sbjct: 180 -ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 215
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 97/217 (44%), Gaps = 35/217 (16%)
Query: 611 FNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQE--GSLQGEKEFLTEIQFLSRLHHRNL 667
+ + + +G G YG V G VAVK+ S+ K E++ L + H N+
Sbjct: 22 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 81
Query: 668 VSLVGY------CDEEGEQMLVYEFMS---NGTLRDQ-LSAKSKEPLGFAMRLSIALGSS 717
+ L+ +E + LV M N ++ Q L+ + L + +
Sbjct: 82 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL-------- 133
Query: 718 RGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVV 777
RG+ Y+H+ AD + HRD+K SN+ ++ K+ DFGL+R ++ G V
Sbjct: 134 RGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGYV-------- 181
Query: 778 KGTPGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLTG 813
T Y PE L +++ D++S+G + ELLTG
Sbjct: 182 -ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 217
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 97/217 (44%), Gaps = 35/217 (16%)
Query: 611 FNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQE--GSLQGEKEFLTEIQFLSRLHHRNL 667
+ + + +G G YG V G VAVK+ S+ K E++ L + H N+
Sbjct: 21 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 80
Query: 668 VSLVGY------CDEEGEQMLVYEFMS---NGTLRDQ-LSAKSKEPLGFAMRLSIALGSS 717
+ L+ +E + LV M N ++ Q L+ + L + +
Sbjct: 81 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL-------- 132
Query: 718 RGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVV 777
RG+ Y+H+ AD + HRD+K SN+ ++ K+ DFGL+R ++ G V
Sbjct: 133 RGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGYV-------- 180
Query: 778 KGTPGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLTG 813
T Y PE L +++ D++S+G + ELLTG
Sbjct: 181 -ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 216
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 52.8 bits (125), Expect = 8e-07, Method: Composition-based stats.
Identities = 58/231 (25%), Positives = 100/231 (43%), Gaps = 46/231 (19%)
Query: 617 IGQGGYGKVYKGI-LPDGTVVAVKRAQE------GSLQGEKEFLTEIQFLSRLHH--RNL 667
+G GG+G VY GI + D VA+K ++ G L E+ L ++ +
Sbjct: 39 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 98
Query: 668 VSLVGYCDEEGEQMLV----------YEFMSN-GTLRDQLSAKSKEPLGFAMRLSIALGS 716
+ L+ + + +L+ ++F++ G L+++L+ + A+R G
Sbjct: 99 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG- 157
Query: 717 SRGILYLHTEADPPVFHRDIKASNILLD-HKFTAKVADFGLSRLAPVPDIEGIVPAHVST 775
V HRDIK NIL+D ++ K+ DFG L + V T
Sbjct: 158 --------------VLHRDIKDENILIDLNRGELKLIDFGSGAL---------LKDTVYT 194
Query: 776 VVKGTPGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLTGMQPISHGKNIVR 825
GT Y PE+ H+ +S V+SLG++ +++ G P H + I+R
Sbjct: 195 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR 245
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 97/217 (44%), Gaps = 35/217 (16%)
Query: 611 FNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQE--GSLQGEKEFLTEIQFLSRLHHRNL 667
+ + + +G G YG V G VAVK+ S+ K E++ L + H N+
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 668 VSLVGY------CDEEGEQMLVYEFMS---NGTLRDQ-LSAKSKEPLGFAMRLSIALGSS 717
+ L+ +E + LV M N ++ Q L+ + L + +
Sbjct: 84 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL-------- 135
Query: 718 RGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVV 777
RG+ Y+H+ AD + HRD+K SN+ ++ K+ DFGL+R ++ G V
Sbjct: 136 RGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGYV-------- 183
Query: 778 KGTPGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLTG 813
T Y PE L +++ D++S+G + ELLTG
Sbjct: 184 -ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 103/224 (45%), Gaps = 33/224 (14%)
Query: 613 SSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH-HRNLVSL 670
+S +G+G Y KV + L +G AVK ++ + E++ L + ++N++ L
Sbjct: 17 TSELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILEL 76
Query: 671 VGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPP 730
+ + +++ LV+E + G++ + + A R+ + ++ + +LHT+
Sbjct: 77 IEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAA--LDFLHTKG--- 131
Query: 731 VFHRDIKASNILLD--HKFT-AKVADFGL-------SRLAPVPDIEGIVPAHVSTVVKGT 780
+ HRD+K NIL + K + K+ DF L + P+ E P G+
Sbjct: 132 IAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPC-------GS 184
Query: 781 PGYLDPEYFLTHKLTDKS-------DVYSLGVVFLELLTGMQPI 817
Y+ PE + TD++ D++SLGVV +L+G P
Sbjct: 185 AEYMAPE--VVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPF 226
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 52.8 bits (125), Expect = 8e-07, Method: Composition-based stats.
Identities = 58/231 (25%), Positives = 100/231 (43%), Gaps = 46/231 (19%)
Query: 617 IGQGGYGKVYKGI-LPDGTVVAVKRAQE------GSLQGEKEFLTEIQFLSRLHH--RNL 667
+G GG+G VY GI + D VA+K ++ G L E+ L ++ +
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 76
Query: 668 VSLVGYCDEEGEQMLV----------YEFMSN-GTLRDQLSAKSKEPLGFAMRLSIALGS 716
+ L+ + + +L+ ++F++ G L+++L+ + A+R G
Sbjct: 77 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG- 135
Query: 717 SRGILYLHTEADPPVFHRDIKASNILLD-HKFTAKVADFGLSRLAPVPDIEGIVPAHVST 775
V HRDIK NIL+D ++ K+ DFG L + V T
Sbjct: 136 --------------VLHRDIKDENILIDLNRGELKLIDFGSGAL---------LKDTVYT 172
Query: 776 VVKGTPGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLTGMQPISHGKNIVR 825
GT Y PE+ H+ +S V+SLG++ +++ G P H + I+R
Sbjct: 173 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR 223
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 97/217 (44%), Gaps = 35/217 (16%)
Query: 611 FNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQE--GSLQGEKEFLTEIQFLSRLHHRNL 667
+ + + +G G YG V G VAVK+ S+ K E++ L + H N+
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 668 VSLVGY------CDEEGEQMLVYEFMS---NGTLRDQ-LSAKSKEPLGFAMRLSIALGSS 717
+ L+ +E + LV M N ++ Q L+ + L + +
Sbjct: 84 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL-------- 135
Query: 718 RGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVV 777
RG+ Y+H+ AD + HRD+K SN+ ++ K+ DFGL+R ++ G V
Sbjct: 136 RGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGYV-------- 183
Query: 778 KGTPGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLTG 813
T Y PE L +++ D++S+G + ELLTG
Sbjct: 184 -ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 97/217 (44%), Gaps = 35/217 (16%)
Query: 611 FNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQE--GSLQGEKEFLTEIQFLSRLHHRNL 667
+ + + +G G YG V G VAVK+ S+ K E++ L + H N+
Sbjct: 29 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 88
Query: 668 VSLVGY------CDEEGEQMLVYEFMS---NGTLRDQ-LSAKSKEPLGFAMRLSIALGSS 717
+ L+ +E + LV M N ++ Q L+ + L + +
Sbjct: 89 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL-------- 140
Query: 718 RGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVV 777
RG+ Y+H+ AD + HRD+K SN+ ++ K+ DFGL+R ++ G V
Sbjct: 141 RGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGYV-------- 188
Query: 778 KGTPGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLTG 813
T Y PE L +++ D++S+G + ELLTG
Sbjct: 189 -ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 224
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 52.8 bits (125), Expect = 9e-07, Method: Composition-based stats.
Identities = 58/231 (25%), Positives = 100/231 (43%), Gaps = 46/231 (19%)
Query: 617 IGQGGYGKVYKGI-LPDGTVVAVKRAQE------GSLQGEKEFLTEIQFLSRLHH--RNL 667
+G GG+G VY GI + D VA+K ++ G L E+ L ++ +
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 91
Query: 668 VSLVGYCDEEGEQMLV----------YEFMSN-GTLRDQLSAKSKEPLGFAMRLSIALGS 716
+ L+ + + +L+ ++F++ G L+++L+ + A+R G
Sbjct: 92 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG- 150
Query: 717 SRGILYLHTEADPPVFHRDIKASNILLD-HKFTAKVADFGLSRLAPVPDIEGIVPAHVST 775
V HRDIK NIL+D ++ K+ DFG L + V T
Sbjct: 151 --------------VLHRDIKDENILIDLNRGELKLIDFGSGAL---------LKDTVYT 187
Query: 776 VVKGTPGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLTGMQPISHGKNIVR 825
GT Y PE+ H+ +S V+SLG++ +++ G P H + I+R
Sbjct: 188 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR 238
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 97/217 (44%), Gaps = 35/217 (16%)
Query: 611 FNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQE--GSLQGEKEFLTEIQFLSRLHHRNL 667
+ + + +G G YG V G VAVK+ S+ K E++ L + H N+
Sbjct: 47 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 106
Query: 668 VSLVGY------CDEEGEQMLVYEFMS---NGTLRDQ-LSAKSKEPLGFAMRLSIALGSS 717
+ L+ +E + LV M N ++ Q L+ + L + +
Sbjct: 107 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL-------- 158
Query: 718 RGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVV 777
RG+ Y+H+ AD + HRD+K SN+ ++ K+ DFGL+R ++ G V
Sbjct: 159 RGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMXGYV-------- 206
Query: 778 KGTPGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLTG 813
T Y PE L +++ D++S+G + ELLTG
Sbjct: 207 -ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 242
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 97/217 (44%), Gaps = 35/217 (16%)
Query: 611 FNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQE--GSLQGEKEFLTEIQFLSRLHHRNL 667
+ + + +G G YG V G VAVK+ S+ K E++ L + H N+
Sbjct: 21 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 80
Query: 668 VSLVGY------CDEEGEQMLVYEFMS---NGTLRDQ-LSAKSKEPLGFAMRLSIALGSS 717
+ L+ +E + LV M N ++ Q L+ + L + +
Sbjct: 81 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL-------- 132
Query: 718 RGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVV 777
RG+ Y+H+ AD + HRD+K SN+ ++ K+ DFGL+R ++ G V
Sbjct: 133 RGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGYV-------- 180
Query: 778 KGTPGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLTG 813
T Y PE L +++ D++S+G + ELLTG
Sbjct: 181 -ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 216
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 97/217 (44%), Gaps = 35/217 (16%)
Query: 611 FNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQE--GSLQGEKEFLTEIQFLSRLHHRNL 667
+ + + +G G YG V G VAVK+ S+ K E++ L + H N+
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 668 VSLVGY------CDEEGEQMLVYEFMS---NGTLRDQ-LSAKSKEPLGFAMRLSIALGSS 717
+ L+ +E + LV M N ++ Q L+ + L + +
Sbjct: 84 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL-------- 135
Query: 718 RGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVV 777
RG+ Y+H+ AD + HRD+K SN+ ++ K+ DFGL+R ++ G V
Sbjct: 136 RGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGYV-------- 183
Query: 778 KGTPGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLTG 813
T Y PE L +++ D++S+G + ELLTG
Sbjct: 184 -ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 97/217 (44%), Gaps = 35/217 (16%)
Query: 611 FNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQE--GSLQGEKEFLTEIQFLSRLHHRNL 667
+ + + +G G YG V G VAVK+ S+ K E++ L + H N+
Sbjct: 29 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 88
Query: 668 VSLVGY------CDEEGEQMLVYEFMS---NGTLRDQ-LSAKSKEPLGFAMRLSIALGSS 717
+ L+ +E + LV M N ++ Q L+ + L + +
Sbjct: 89 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL-------- 140
Query: 718 RGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVV 777
RG+ Y+H+ AD + HRD+K SN+ ++ K+ DFGL+R ++ G V
Sbjct: 141 RGLKYIHS-AD--IIHRDLKPSNLAVNEDXELKILDFGLARHTD-DEMTGYV-------- 188
Query: 778 KGTPGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLTG 813
T Y PE L +++ D++S+G + ELLTG
Sbjct: 189 -ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 224
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 97/217 (44%), Gaps = 35/217 (16%)
Query: 611 FNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQE--GSLQGEKEFLTEIQFLSRLHHRNL 667
+ + + +G G YG V G VAVK+ S+ K E++ L + H N+
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 668 VSLVGY------CDEEGEQMLVYEFMS---NGTLRDQ-LSAKSKEPLGFAMRLSIALGSS 717
+ L+ +E + LV M N ++ Q L+ + L + +
Sbjct: 84 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL-------- 135
Query: 718 RGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVV 777
RG+ Y+H+ AD + HRD+K SN+ ++ K+ DFGL+R ++ G V
Sbjct: 136 RGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGYV-------- 183
Query: 778 KGTPGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLTG 813
T Y PE L +++ D++S+G + ELLTG
Sbjct: 184 -ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 97/217 (44%), Gaps = 35/217 (16%)
Query: 611 FNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQE--GSLQGEKEFLTEIQFLSRLHHRNL 667
+ + + +G G YG V G VAVK+ S+ K E++ L + H N+
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 668 VSLVGY------CDEEGEQMLVYEFMS---NGTLRDQ-LSAKSKEPLGFAMRLSIALGSS 717
+ L+ +E + LV M N ++ Q L+ + L + +
Sbjct: 84 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL-------- 135
Query: 718 RGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVV 777
RG+ Y+H+ AD + HRD+K SN+ ++ K+ DFGL+R ++ G V
Sbjct: 136 RGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGYV-------- 183
Query: 778 KGTPGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLTG 813
T Y PE L +++ D++S+G + ELLTG
Sbjct: 184 -ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 97/217 (44%), Gaps = 35/217 (16%)
Query: 611 FNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQE--GSLQGEKEFLTEIQFLSRLHHRNL 667
+ + + +G G YG V G VAVK+ S+ K E++ L + H N+
Sbjct: 20 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 79
Query: 668 VSLVGY------CDEEGEQMLVYEFMS---NGTLRDQ-LSAKSKEPLGFAMRLSIALGSS 717
+ L+ +E + LV M N ++ Q L+ + L + +
Sbjct: 80 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL-------- 131
Query: 718 RGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVV 777
RG+ Y+H+ AD + HRD+K SN+ ++ K+ DFGL+R ++ G V
Sbjct: 132 RGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGYV-------- 179
Query: 778 KGTPGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLTG 813
T Y PE L +++ D++S+G + ELLTG
Sbjct: 180 -ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 215
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 97/217 (44%), Gaps = 35/217 (16%)
Query: 611 FNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQE--GSLQGEKEFLTEIQFLSRLHHRNL 667
+ + + +G G YG V G VAVK+ S+ K E++ L + H N+
Sbjct: 29 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 88
Query: 668 VSLVGY------CDEEGEQMLVYEFMS---NGTLRDQ-LSAKSKEPLGFAMRLSIALGSS 717
+ L+ +E + LV M N ++ Q L+ + L + +
Sbjct: 89 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL-------- 140
Query: 718 RGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVV 777
RG+ Y+H+ AD + HRD+K SN+ ++ K+ DFGL+R ++ G V
Sbjct: 141 RGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGYV-------- 188
Query: 778 KGTPGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLTG 813
T Y PE L +++ D++S+G + ELLTG
Sbjct: 189 -ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 224
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 97/217 (44%), Gaps = 35/217 (16%)
Query: 611 FNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQE--GSLQGEKEFLTEIQFLSRLHHRNL 667
+ + + +G G YG V G VAVK+ S+ K E++ L + H N+
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 668 VSLVGY------CDEEGEQMLVYEFMS---NGTLRDQ-LSAKSKEPLGFAMRLSIALGSS 717
+ L+ +E + LV M N ++ Q L+ + L + +
Sbjct: 84 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL-------- 135
Query: 718 RGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVV 777
RG+ Y+H+ AD + HRD+K SN+ ++ K+ DFGL+R ++ G V
Sbjct: 136 RGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGYV-------- 183
Query: 778 KGTPGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLTG 813
T Y PE L +++ D++S+G + ELLTG
Sbjct: 184 -ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 97/217 (44%), Gaps = 35/217 (16%)
Query: 611 FNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQE--GSLQGEKEFLTEIQFLSRLHHRNL 667
+ + + +G G YG V G VAVK+ S+ K E++ L + H N+
Sbjct: 23 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 82
Query: 668 VSLVGY------CDEEGEQMLVYEFMS---NGTLRDQ-LSAKSKEPLGFAMRLSIALGSS 717
+ L+ +E + LV M N ++ Q L+ + L + +
Sbjct: 83 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL-------- 134
Query: 718 RGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVV 777
RG+ Y+H+ AD + HRD+K SN+ ++ K+ DFGL+R ++ G V
Sbjct: 135 RGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGYV-------- 182
Query: 778 KGTPGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLTG 813
T Y PE L +++ D++S+G + ELLTG
Sbjct: 183 -ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 218
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 98/218 (44%), Gaps = 26/218 (11%)
Query: 611 FNSSTQIGQGGYGKVYK------GILPDGTVVAVKRAQEGSLQG--EKEFLTEIQFLSRL 662
+++ ++G G + V K G+ + KR + S +G ++ E+ L +
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIK-KRRTKSSRRGVSREDIEREVSILKEI 71
Query: 663 HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILY 722
H N+++L + + + +L+ E ++ G L D L+ KE L G+ Y
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLA--EKESLTEEEATEFLKQILNGVYY 129
Query: 723 LHTEADPPVFHRDIKASNI-LLDH---KFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVK 778
LH+ + H D+K NI LLD K K+ DFGL+ I + +
Sbjct: 130 LHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--------KIDFGNEFKNIF 178
Query: 779 GTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQP 816
GTP ++ PE L ++D++S+GV+ LL+G P
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 97/217 (44%), Gaps = 35/217 (16%)
Query: 611 FNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQE--GSLQGEKEFLTEIQFLSRLHHRNL 667
+ + + +G G YG V G VAVK+ S+ K E++ L + H N+
Sbjct: 26 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 85
Query: 668 VSLVGY------CDEEGEQMLVYEFMS---NGTLRDQ-LSAKSKEPLGFAMRLSIALGSS 717
+ L+ +E + LV M N ++ Q L+ + L + +
Sbjct: 86 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL-------- 137
Query: 718 RGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVV 777
RG+ Y+H+ AD + HRD+K SN+ ++ K+ DFGL+R ++ G V
Sbjct: 138 RGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGYV-------- 185
Query: 778 KGTPGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLTG 813
T Y PE L +++ D++S+G + ELLTG
Sbjct: 186 -ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 221
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 97/217 (44%), Gaps = 35/217 (16%)
Query: 611 FNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQE--GSLQGEKEFLTEIQFLSRLHHRNL 667
+ + + +G G YG V G VAVK+ S+ K E++ L + H N+
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 668 VSLVGY------CDEEGEQMLVYEFMS---NGTLRDQ-LSAKSKEPLGFAMRLSIALGSS 717
+ L+ +E + LV M N ++ Q L+ + L + +
Sbjct: 84 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL-------- 135
Query: 718 RGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVV 777
RG+ Y+H+ AD + HRD+K SN+ ++ K+ DFGL+R ++ G V
Sbjct: 136 RGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGYV-------- 183
Query: 778 KGTPGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLTG 813
T Y PE L +++ D++S+G + ELLTG
Sbjct: 184 -ATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 97/217 (44%), Gaps = 35/217 (16%)
Query: 611 FNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQE--GSLQGEKEFLTEIQFLSRLHHRNL 667
+ + + +G G YG V G VAVK+ S+ K E++ L + H N+
Sbjct: 26 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 85
Query: 668 VSLVGY------CDEEGEQMLVYEFMS---NGTLRDQ-LSAKSKEPLGFAMRLSIALGSS 717
+ L+ +E + LV M N ++ Q L+ + L + +
Sbjct: 86 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL-------- 137
Query: 718 RGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVV 777
RG+ Y+H+ AD + HRD+K SN+ ++ K+ DFGL+R ++ G V
Sbjct: 138 RGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGYV-------- 185
Query: 778 KGTPGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLTG 813
T Y PE L +++ D++S+G + ELLTG
Sbjct: 186 -ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 221
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 97/217 (44%), Gaps = 35/217 (16%)
Query: 611 FNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQE--GSLQGEKEFLTEIQFLSRLHHRNL 667
+ + + +G G YG V G VAVK+ S+ K E++ L + H N+
Sbjct: 31 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 90
Query: 668 VSLVGY------CDEEGEQMLVYEFMS---NGTLRDQ-LSAKSKEPLGFAMRLSIALGSS 717
+ L+ +E + LV M N ++ Q L+ + L + +
Sbjct: 91 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL-------- 142
Query: 718 RGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVV 777
RG+ Y+H+ AD + HRD+K SN+ ++ K+ DFGL+R ++ G V
Sbjct: 143 RGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGYV-------- 190
Query: 778 KGTPGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLTG 813
T Y PE L +++ D++S+G + ELLTG
Sbjct: 191 -ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 226
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 97/217 (44%), Gaps = 35/217 (16%)
Query: 611 FNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQE--GSLQGEKEFLTEIQFLSRLHHRNL 667
+ + + +G G YG V G VAVK+ S+ K E++ L + H N+
Sbjct: 26 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 85
Query: 668 VSLVGY------CDEEGEQMLVYEFMS---NGTLRDQ-LSAKSKEPLGFAMRLSIALGSS 717
+ L+ +E + LV M N ++ Q L+ + L + +
Sbjct: 86 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL-------- 137
Query: 718 RGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVV 777
RG+ Y+H+ AD + HRD+K SN+ ++ K+ DFGL+R ++ G V
Sbjct: 138 RGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGYV-------- 185
Query: 778 KGTPGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLTG 813
T Y PE L +++ D++S+G + ELLTG
Sbjct: 186 -ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 221
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 97/217 (44%), Gaps = 35/217 (16%)
Query: 611 FNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQE--GSLQGEKEFLTEIQFLSRLHHRNL 667
+ + + +G G YG V G VAVK+ S+ K E++ L + H N+
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 668 VSLVGY------CDEEGEQMLVYEFMS---NGTLRDQ-LSAKSKEPLGFAMRLSIALGSS 717
+ L+ +E + LV M N ++ Q L+ + L + +
Sbjct: 84 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL-------- 135
Query: 718 RGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVV 777
RG+ Y+H+ AD + HRD+K SN+ ++ K+ DFGL+R ++ G V
Sbjct: 136 RGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGYV-------- 183
Query: 778 KGTPGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLTG 813
T Y PE L +++ D++S+G + ELLTG
Sbjct: 184 -ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 97/217 (44%), Gaps = 35/217 (16%)
Query: 611 FNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQE--GSLQGEKEFLTEIQFLSRLHHRNL 667
+ + + +G G YG V G VAVK+ S+ K E++ L + H N+
Sbjct: 30 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 89
Query: 668 VSLVGY------CDEEGEQMLVYEFMS---NGTLRDQ-LSAKSKEPLGFAMRLSIALGSS 717
+ L+ +E + LV M N ++ Q L+ + L + +
Sbjct: 90 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL-------- 141
Query: 718 RGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVV 777
RG+ Y+H+ AD + HRD+K SN+ ++ K+ DFGL+R ++ G V
Sbjct: 142 RGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGYV-------- 189
Query: 778 KGTPGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLTG 813
T Y PE L +++ D++S+G + ELLTG
Sbjct: 190 -ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 225
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 52.4 bits (124), Expect = 1e-06, Method: Composition-based stats.
Identities = 58/231 (25%), Positives = 100/231 (43%), Gaps = 46/231 (19%)
Query: 617 IGQGGYGKVYKGI-LPDGTVVAVKRAQE------GSLQGEKEFLTEIQFLSRLHH--RNL 667
+G GG+G VY GI + D VA+K ++ G L E+ L ++ +
Sbjct: 16 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 75
Query: 668 VSLVGYCDEEGEQMLV----------YEFMSN-GTLRDQLSAKSKEPLGFAMRLSIALGS 716
+ L+ + + +L+ ++F++ G L+++L+ + A+R G
Sbjct: 76 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG- 134
Query: 717 SRGILYLHTEADPPVFHRDIKASNILLD-HKFTAKVADFGLSRLAPVPDIEGIVPAHVST 775
V HRDIK NIL+D ++ K+ DFG L + V T
Sbjct: 135 --------------VLHRDIKDENILIDLNRGELKLIDFGSGAL---------LKDTVYT 171
Query: 776 VVKGTPGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLTGMQPISHGKNIVR 825
GT Y PE+ H+ +S V+SLG++ +++ G P H + I+R
Sbjct: 172 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR 222
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 52.4 bits (124), Expect = 1e-06, Method: Composition-based stats.
Identities = 58/231 (25%), Positives = 100/231 (43%), Gaps = 46/231 (19%)
Query: 617 IGQGGYGKVYKGI-LPDGTVVAVKRAQE------GSLQGEKEFLTEIQFLSRLHH--RNL 667
+G GG+G VY GI + D VA+K ++ G L E+ L ++ +
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 76
Query: 668 VSLVGYCDEEGEQMLV----------YEFMSN-GTLRDQLSAKSKEPLGFAMRLSIALGS 716
+ L+ + + +L+ ++F++ G L+++L+ + A+R G
Sbjct: 77 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG- 135
Query: 717 SRGILYLHTEADPPVFHRDIKASNILLD-HKFTAKVADFGLSRLAPVPDIEGIVPAHVST 775
V HRDIK NIL+D ++ K+ DFG L + V T
Sbjct: 136 --------------VLHRDIKDENILIDLNRGELKLIDFGSGAL---------LKDTVYT 172
Query: 776 VVKGTPGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLTGMQPISHGKNIVR 825
GT Y PE+ H+ +S V+SLG++ +++ G P H + I+R
Sbjct: 173 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR 223
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 97/217 (44%), Gaps = 35/217 (16%)
Query: 611 FNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQE--GSLQGEKEFLTEIQFLSRLHHRNL 667
+ + + +G G YG V G VAVK+ S+ K E++ L + H N+
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 668 VSLVGY------CDEEGEQMLVYEFMS---NGTLRDQ-LSAKSKEPLGFAMRLSIALGSS 717
+ L+ +E + LV M N ++ Q L+ + L + +
Sbjct: 84 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL-------- 135
Query: 718 RGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVV 777
RG+ Y+H+ AD + HRD+K SN+ ++ K+ DFGL+R ++ G V
Sbjct: 136 RGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGYV-------- 183
Query: 778 KGTPGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLTG 813
T Y PE L +++ D++S+G + ELLTG
Sbjct: 184 -ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 114/278 (41%), Gaps = 37/278 (13%)
Query: 616 QIGQGGYGKVYKGILPDGTVVAVKRA--QEGSLQGEKEFLTEIQFLSRL--HHRNLVSLV 671
QIG GG KV++ + + A+K +E Q + EI +L++L H ++ L
Sbjct: 19 QIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 78
Query: 672 GYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPV 731
Y E +Y M G + K K+ + R S + +H +
Sbjct: 79 DY---EITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG---I 132
Query: 732 FHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYF-- 789
H D+K +N L+ K+ DFG++ PD +V S V GT Y+ PE
Sbjct: 133 VHSDLKPANFLIVDGML-KLIDFGIANQMQ-PDTTSVVKD--SQV--GTVNYMPPEAIKD 186
Query: 790 ---------LTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVI 840
K++ KSDV+SLG + + G P I Q S + ++I
Sbjct: 187 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ---------IINQISKLHAII 237
Query: 841 DGNMGSYPSECVEKFIKLALKCC-QDETDARPSMSEVM 877
D N + EK ++ LKCC + + R S+ E++
Sbjct: 238 DPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 275
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 97/217 (44%), Gaps = 35/217 (16%)
Query: 611 FNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQE--GSLQGEKEFLTEIQFLSRLHHRNL 667
+ + + +G G YG V G VAVK+ S+ K E++ L + H N+
Sbjct: 35 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 94
Query: 668 VSLVGY------CDEEGEQMLVYEFMS---NGTLRDQ-LSAKSKEPLGFAMRLSIALGSS 717
+ L+ +E + LV M N ++ Q L+ + L + +
Sbjct: 95 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL-------- 146
Query: 718 RGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVV 777
RG+ Y+H+ AD + HRD+K SN+ ++ K+ DFGL+R ++ G V
Sbjct: 147 RGLKYIHS-AD--IIHRDLKPSNLAVNEDXELKILDFGLARHTD-DEMTGYV-------- 194
Query: 778 KGTPGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLTG 813
T Y PE L +++ D++S+G + ELLTG
Sbjct: 195 -ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 230
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 87/214 (40%), Gaps = 25/214 (11%)
Query: 617 IGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGE-----KEFLTEIQFLSRLHHRNLVSL 670
IG+G + V + I G AVK ++ E L H ++V L
Sbjct: 32 IGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 91
Query: 671 VGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGIL----YLHTE 726
+ +G +V+EFM L ++ ++ GF ++A R IL Y H
Sbjct: 92 LETYSSDGMLYMVFEFMDGADLCFEIVKRADA--GFVYSEAVASHYMRQILEALRYCH-- 147
Query: 727 ADPPVFHRDIKASNILLDHKFTA---KVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGY 783
D + HRD+K N+LL K + K+ DFG++ I+ V+ GTP +
Sbjct: 148 -DNNIIHRDVKPENVLLASKENSAPVKLGDFGVA-------IQLGESGLVAGGRVGTPHF 199
Query: 784 LDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPI 817
+ PE DV+ GV+ LL+G P
Sbjct: 200 MAPEVVKREPYGKPVDVWGCGVILFILLSGCLPF 233
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 97/219 (44%), Gaps = 35/219 (15%)
Query: 609 NNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQE--GSLQGEKEFLTEIQFLSRLHHR 665
+ + + +G G YG V + G +AVK+ S+ K E++ L + H
Sbjct: 51 ERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 110
Query: 666 NLVSLVGY------CDEEGEQMLVYEFMS---NGTLRDQ-LSAKSKEPLGFAMRLSIALG 715
N++ L+ +E + LV M N ++ Q L+ + L + +
Sbjct: 111 NVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL------ 164
Query: 716 SSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVST 775
RG+ Y+H+ AD + HRD+K SN+ ++ K+ DFGL+R ++ G V
Sbjct: 165 --RGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGYV------ 212
Query: 776 VVKGTPGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLTG 813
T Y PE L + + D++S+G + ELLTG
Sbjct: 213 ---ATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTG 248
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 94/211 (44%), Gaps = 35/211 (16%)
Query: 617 IGQGGYGKVYKGI-LPDGTVVAVKRAQE--GSLQGEKEFLTEIQFLSRLHHRNLVSLVGY 673
+G G YG V G VAVK+ S+ K E++ L + H N++ L+
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 99
Query: 674 ------CDEEGEQMLVYEFMS---NGTLRDQ-LSAKSKEPLGFAMRLSIALGSSRGILYL 723
+E + LV M N ++ Q L+ + L + + RG+ Y+
Sbjct: 100 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL--------RGLKYI 151
Query: 724 HTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGY 783
H+ AD + HRD+K SN+ ++ K+ DFGL+R ++ G V T Y
Sbjct: 152 HS-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGYV---------ATRWY 198
Query: 784 LDPEYFLTHKLTDKS-DVYSLGVVFLELLTG 813
PE L +++ D++S+G + ELLTG
Sbjct: 199 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 229
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 95/216 (43%), Gaps = 29/216 (13%)
Query: 609 NNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQE--GSLQGEKEFLTEIQFLSRLHHR 665
+ + + +G G YG V G VAVK+ S+ K E++ L + H
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 77
Query: 666 NLVSLVGY------CDEEGEQMLVYEFMSNGTLRDQLSAK-SKEPLGFAMRLSIALGSSR 718
N++ L+ +E + LV M AK + + + F + + R
Sbjct: 78 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFLIYQIL-----R 132
Query: 719 GILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVK 778
G+ Y+H+ AD + HRD+K SN+ ++ K+ DFGL+R ++ G V
Sbjct: 133 GLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGYV--------- 179
Query: 779 GTPGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLTG 813
T Y PE L +++ D++S+G + ELLTG
Sbjct: 180 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 215
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 97/217 (44%), Gaps = 35/217 (16%)
Query: 611 FNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQE--GSLQGEKEFLTEIQFLSRLHHRNL 667
+ + + +G G YG V G VAVK+ S+ K E++ L + H N+
Sbjct: 36 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 95
Query: 668 VSLVGY------CDEEGEQMLVYEFMS---NGTLRDQ-LSAKSKEPLGFAMRLSIALGSS 717
+ L+ +E + LV M N ++ Q L+ + L + +
Sbjct: 96 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL-------- 147
Query: 718 RGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVV 777
RG+ Y+H+ AD + HRD+K SN+ ++ K+ DFGL+R ++ G V
Sbjct: 148 RGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGYV-------- 195
Query: 778 KGTPGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLTG 813
T Y PE L +++ D++S+G + ELLTG
Sbjct: 196 -ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 231
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 97/217 (44%), Gaps = 35/217 (16%)
Query: 611 FNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQE--GSLQGEKEFLTEIQFLSRLHHRNL 667
+ + + +G G YG V G VAVK+ S+ K E++ L + H N+
Sbjct: 36 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 95
Query: 668 VSLVGY------CDEEGEQMLVYEFMS---NGTLRDQ-LSAKSKEPLGFAMRLSIALGSS 717
+ L+ +E + LV M N ++ Q L+ + L + +
Sbjct: 96 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL-------- 147
Query: 718 RGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVV 777
RG+ Y+H+ AD + HRD+K SN+ ++ K+ DFGL+R ++ G V
Sbjct: 148 RGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGYV-------- 195
Query: 778 KGTPGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLTG 813
T Y PE L +++ D++S+G + ELLTG
Sbjct: 196 -ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 231
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 76/170 (44%), Gaps = 17/170 (10%)
Query: 654 TEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQL-SAKSK-EPLGFAMRLS 711
EI+ L L H N++ + ++ +V E G L +++ SA+++ + L
Sbjct: 69 AEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAE 128
Query: 712 IALGSSRGILYLHTEADPPVFHRDIKASNILLDH---KFTAKVADFGLSRLAPVPDIEGI 768
+ + Y H++ V H+D+K NIL K+ DFGL+ L +
Sbjct: 129 LMKQMMNALAYFHSQH---VVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDE---- 181
Query: 769 VPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPIS 818
ST GT Y+ PE F +T K D++S GVV LLTG P +
Sbjct: 182 ----HSTNAAGTALYMAPEVF-KRDVTFKCDIWSAGVVMYFLLTGCLPFT 226
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 103/240 (42%), Gaps = 35/240 (14%)
Query: 608 TNNFNSSTQIGQGGYGKVYKGILPD---GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHH 664
++ + IG G +G ++ D +VAVK + G + ++ EI L H
Sbjct: 18 SDRYELVKDIGAGNFG--VARLMRDKQANELVAVKYIERGE-KIDENVKREIINHRSLRH 74
Query: 665 RNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAK---SKEPLGFAMRLSIALGSSRGIL 721
N+V +V E+ S G L +++ S++ F + I+ G+
Sbjct: 75 PNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLIS-----GVS 129
Query: 722 YLHTEADPPVFHRDIKASNILLDHKFTA--KVADFGLSRLAPVPDIEGIVPAHVSTVVKG 779
Y H V HRD+K N LLD K+ADFG S+ + ++ + + V G
Sbjct: 130 YAHAMQ---VAHRDLKLENTLLDGSPAPRLKIADFGYSKAS-------VLHSQPKSAV-G 178
Query: 780 TPGYLDPEYFLTHKLTDK-SDVYSLGVVFLELLTGM-------QPISHGKNIVREVNIAY 831
TP Y+ PE L + K +DV+S GV +L G +P + K I R +N+ Y
Sbjct: 179 TPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQY 238
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 97/217 (44%), Gaps = 35/217 (16%)
Query: 611 FNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQE--GSLQGEKEFLTEIQFLSRLHHRNL 667
+ + + +G G YG V G VAVK+ S+ K E++ L + H N+
Sbjct: 30 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 89
Query: 668 VSLVGY------CDEEGEQMLVYEFMS---NGTLRDQ-LSAKSKEPLGFAMRLSIALGSS 717
+ L+ +E + LV M N ++ Q L+ + L + +
Sbjct: 90 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL-------- 141
Query: 718 RGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVV 777
RG+ Y+H+ AD + HRD+K SN+ ++ K+ DFGL+R ++ G V
Sbjct: 142 RGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGYV-------- 189
Query: 778 KGTPGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLTG 813
T Y PE L +++ D++S+G + ELLTG
Sbjct: 190 -ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 225
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 97/219 (44%), Gaps = 35/219 (15%)
Query: 609 NNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQE--GSLQGEKEFLTEIQFLSRLHHR 665
+ + + +G G YG V G VAVK+ S+ K E++ L + H
Sbjct: 42 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 101
Query: 666 NLVSLVGY------CDEEGEQMLVYEFMS---NGTLRDQ-LSAKSKEPLGFAMRLSIALG 715
N++ L+ +E + LV M N ++ Q L+ + L + +
Sbjct: 102 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL------ 155
Query: 716 SSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVST 775
RG+ Y+H+ AD + HRD+K SN+ ++ K+ DFGL+R ++ G V
Sbjct: 156 --RGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGYV------ 203
Query: 776 VVKGTPGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLTG 813
T Y PE L +++ D++S+G + ELLTG
Sbjct: 204 ---ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 239
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 97/217 (44%), Gaps = 35/217 (16%)
Query: 611 FNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQE--GSLQGEKEFLTEIQFLSRLHHRNL 667
+ + + +G G YG V G VAVK+ S+ K E++ L + H N+
Sbjct: 35 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 94
Query: 668 VSLVGY------CDEEGEQMLVYEFMS---NGTLRDQ-LSAKSKEPLGFAMRLSIALGSS 717
+ L+ +E + LV M N ++ Q L+ + L + +
Sbjct: 95 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL-------- 146
Query: 718 RGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVV 777
RG+ Y+H+ AD + HRD+K SN+ ++ K+ DFGL+R ++ G V
Sbjct: 147 RGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGYV-------- 194
Query: 778 KGTPGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLTG 813
T Y PE L +++ D++S+G + ELLTG
Sbjct: 195 -ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 230
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 96/217 (44%), Gaps = 35/217 (16%)
Query: 611 FNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQE--GSLQGEKEFLTEIQFLSRLHHRNL 667
+ + + +G G YG V G VAVK+ S+ K E++ L + H N+
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 668 VSLVGY------CDEEGEQMLVYEFMS---NGTLRDQ-LSAKSKEPLGFAMRLSIALGSS 717
+ L+ +E + LV M N ++ Q L+ + L + +
Sbjct: 84 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFLIYQIL-------- 135
Query: 718 RGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVV 777
RG+ Y+H+ AD + HRD+K SN+ ++ K+ DFGL R ++ G V
Sbjct: 136 RGLKYIHS-AD--IIHRDLKPSNLAVNEDSELKILDFGLCRHTD-DEMTGYV-------- 183
Query: 778 KGTPGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLTG 813
T Y PE L +++ D++S+G + ELLTG
Sbjct: 184 -ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 97/219 (44%), Gaps = 35/219 (15%)
Query: 609 NNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQE--GSLQGEKEFLTEIQFLSRLHHR 665
+ + + +G G YG V G VAVK+ S+ K E++ L + H
Sbjct: 45 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 104
Query: 666 NLVSLVGY------CDEEGEQMLVYEFMS---NGTLRDQ-LSAKSKEPLGFAMRLSIALG 715
N++ L+ +E + LV M N ++ Q L+ + L + +
Sbjct: 105 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL------ 158
Query: 716 SSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVST 775
RG+ Y+H+ AD + HRD+K SN+ ++ K+ DFGL+R ++ G V
Sbjct: 159 --RGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGYV------ 206
Query: 776 VVKGTPGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLTG 813
T Y PE L +++ D++S+G + ELLTG
Sbjct: 207 ---ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 242
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 97/217 (44%), Gaps = 35/217 (16%)
Query: 611 FNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQE--GSLQGEKEFLTEIQFLSRLHHRNL 667
+ + + +G G YG V G VAVK+ S+ K E++ L + H N+
Sbjct: 44 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 103
Query: 668 VSLVGY------CDEEGEQMLVYEFMS---NGTLRDQ-LSAKSKEPLGFAMRLSIALGSS 717
+ L+ +E + LV M N ++ Q L+ + L + +
Sbjct: 104 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL-------- 155
Query: 718 RGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVV 777
RG+ Y+H+ AD + HRD+K SN+ ++ K+ DFGL+R ++ G V
Sbjct: 156 RGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMXGXV-------- 203
Query: 778 KGTPGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLTG 813
T Y PE L +++ D++S+G + ELLTG
Sbjct: 204 -ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 239
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 97/217 (44%), Gaps = 35/217 (16%)
Query: 611 FNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQE--GSLQGEKEFLTEIQFLSRLHHRNL 667
+ + + +G G YG V G VAVK+ S+ K E++ L + H N+
Sbjct: 44 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 103
Query: 668 VSLVGY------CDEEGEQMLVYEFMS---NGTLRDQ-LSAKSKEPLGFAMRLSIALGSS 717
+ L+ +E + LV M N ++ Q L+ + L + +
Sbjct: 104 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL-------- 155
Query: 718 RGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVV 777
RG+ Y+H+ AD + HRD+K SN+ ++ K+ DFGL+R ++ G V
Sbjct: 156 RGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGYV-------- 203
Query: 778 KGTPGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLTG 813
T Y PE L +++ D++S+G + ELLTG
Sbjct: 204 -ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 239
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 98/215 (45%), Gaps = 22/215 (10%)
Query: 606 LATNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEG-SLQGEKEFLTEIQFLSR-L 662
+ ++ ++G+G YG V K +P G + AVKR + + Q +K L ++ R +
Sbjct: 31 VKADDLEPIXELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDISXRTV 90
Query: 663 HHRNLVSLVGYCDEEGEQMLVYEFMSNG------TLRDQLSAKSKEPLGFAMRLSIALGS 716
V+ G EG+ + E + D+ ++ LG IA+
Sbjct: 91 DCPFTVTFYGALFREGDVWICXELXDTSLDKFYKQVIDKGQTIPEDILG-----KIAVSI 145
Query: 717 SRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTV 776
+ + +LH++ V HRD+K SN+L++ K DFG+S V D+ + A
Sbjct: 146 VKALEHLHSKLS--VIHRDVKPSNVLINALGQVKXCDFGISGYL-VDDVAKDIDAGCKPY 202
Query: 777 VKGTPGYLDPEYFLTHK-LTDKSDVYSLGVVFLEL 810
P ++PE L K + KSD++SLG+ +EL
Sbjct: 203 X--APERINPE--LNQKGYSVKSDIWSLGITXIEL 233
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 78/168 (46%), Gaps = 24/168 (14%)
Query: 664 HRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAK---SKEPLGFAMRLSIALGSSRGI 720
H N+V L ++ LV E ++ G L +++ K S+ + MR ++ +
Sbjct: 65 HPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVS-----AV 119
Query: 721 LYLHTEADPPVFHRDIKASNILL---DHKFTAKVADFGLSRLAPVPDIEGI-VPAHVSTV 776
++H D V HRD+K N+L + K+ DFG +RL P PD + + P
Sbjct: 120 SHMH---DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKP-PDNQPLKTPCF---- 171
Query: 777 VKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPI-SHGKNI 823
T Y PE + + D++SLGV+ +L+G P SH +++
Sbjct: 172 ---TLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSL 216
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 97/217 (44%), Gaps = 35/217 (16%)
Query: 611 FNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQE--GSLQGEKEFLTEIQFLSRLHHRNL 667
+ + + +G G YG V G VAVK+ S+ K E++ L + H N+
Sbjct: 43 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 102
Query: 668 VSLVGY------CDEEGEQMLVYEFMS---NGTLRDQ-LSAKSKEPLGFAMRLSIALGSS 717
+ L+ +E + LV M N ++ Q L+ + L + +
Sbjct: 103 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL-------- 154
Query: 718 RGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVV 777
RG+ Y+H+ AD + HRD+K SN+ ++ K+ DFGL+R ++ G V
Sbjct: 155 RGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGYV-------- 202
Query: 778 KGTPGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLTG 813
T Y PE L +++ D++S+G + ELLTG
Sbjct: 203 -ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 238
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 97/217 (44%), Gaps = 35/217 (16%)
Query: 611 FNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQE--GSLQGEKEFLTEIQFLSRLHHRNL 667
+ + + +G G YG V G VAVK+ S+ K E++ L + H N+
Sbjct: 43 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 102
Query: 668 VSLVGY------CDEEGEQMLVYEFMS---NGTLRDQ-LSAKSKEPLGFAMRLSIALGSS 717
+ L+ +E + LV M N ++ Q L+ + L + +
Sbjct: 103 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL-------- 154
Query: 718 RGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVV 777
RG+ Y+H+ AD + HRD+K SN+ ++ K+ DFGL+R ++ G V
Sbjct: 155 RGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGYV-------- 202
Query: 778 KGTPGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLTG 813
T Y PE L +++ D++S+G + ELLTG
Sbjct: 203 -ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 238
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 108/255 (42%), Gaps = 42/255 (16%)
Query: 608 TNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHH-- 664
++F +GQG +G+V K D A+K+ + + L+E+ L+ L+H
Sbjct: 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE-EKLSTILSEVXLLASLNHQY 63
Query: 665 -----------RNLVSLVGYCDEEGEQMLVYEFMSNGTLRD-----QLSAKSKEPLGFAM 708
RN V ++ + E+ N TL D L+ + E
Sbjct: 64 VVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFR 123
Query: 709 RLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSR-LAPVPDIEG 767
++ AL Y+H++ + HR++K NI +D K+ DFGL++ + DI
Sbjct: 124 QILEALS------YIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILK 174
Query: 768 IVPAHVS------TVVKGTPGYLDPEYFL-THKLTDKSDVYSLGVVFLELL----TGMQP 816
+ ++ T GT Y+ E T +K D YSLG++F E + TG +
Sbjct: 175 LDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXIYPFSTGXER 234
Query: 817 ISHGKNIVREVNIAY 831
++ K + R V+I +
Sbjct: 235 VNILKKL-RSVSIEF 248
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 97/217 (44%), Gaps = 35/217 (16%)
Query: 611 FNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQE--GSLQGEKEFLTEIQFLSRLHHRNL 667
+ + + +G G YG V G VAVK+ S+ K E++ L + H N+
Sbjct: 30 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 89
Query: 668 VSLVGY------CDEEGEQMLVYEFMS---NGTLRDQ-LSAKSKEPLGFAMRLSIALGSS 717
+ L+ +E + LV M N ++ Q L+ + L + +
Sbjct: 90 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL-------- 141
Query: 718 RGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVV 777
RG+ Y+H+ AD + HRD+K SN+ ++ K+ DFGL+R ++ G V
Sbjct: 142 RGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGYV-------- 189
Query: 778 KGTPGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLTG 813
T Y PE L +++ D++S+G + ELLTG
Sbjct: 190 -ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 225
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 97/217 (44%), Gaps = 35/217 (16%)
Query: 611 FNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQE--GSLQGEKEFLTEIQFLSRLHHRNL 667
+ + + +G G YG V G VAVK+ S+ K E++ L + H N+
Sbjct: 30 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 89
Query: 668 VSLVGY------CDEEGEQMLVYEFMS---NGTLRDQ-LSAKSKEPLGFAMRLSIALGSS 717
+ L+ +E + LV M N ++ Q L+ + L + +
Sbjct: 90 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL-------- 141
Query: 718 RGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVV 777
RG+ Y+H+ AD + HRD+K SN+ ++ K+ DFGL+R ++ G V
Sbjct: 142 RGLKYIHS-AD--IIHRDLKPSNLAVNEDSELKILDFGLARHTD-DEMTGYV-------- 189
Query: 778 KGTPGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLTG 813
T Y PE L +++ D++S+G + ELLTG
Sbjct: 190 -ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 225
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 106/263 (40%), Gaps = 36/263 (13%)
Query: 616 QIGQGGYGKVYKGILPDGTVVAVKRA--QEGSLQGEKEFLTEIQFLSRL--HHRNLVSLV 671
QIG GG KV++ + + A+K +E Q + EI +L++L H ++ L
Sbjct: 63 QIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 122
Query: 672 GYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPV 731
Y E +Y M G + K K+ + R S + +H +
Sbjct: 123 DY---EITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG---I 176
Query: 732 FHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYF-- 789
H D+K +N L+ K+ DFG++ PD +V S V GT Y+ PE
Sbjct: 177 VHSDLKPANFLIVDGML-KLIDFGIANQMQ-PDTTSVVKD--SQV--GTVNYMPPEAIKD 230
Query: 790 ---------LTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVI 840
K++ KSDV+SLG + + G P I Q S + ++I
Sbjct: 231 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ---------IINQISKLHAII 281
Query: 841 DGNMGSYPSECVEKFIKLALKCC 863
D N + EK ++ LKCC
Sbjct: 282 DPNHEIEFPDIPEKDLQDVLKCC 304
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 97/217 (44%), Gaps = 35/217 (16%)
Query: 611 FNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQE--GSLQGEKEFLTEIQFLSRLHHRNL 667
+ + + +G G YG V G VAVK+ S+ K E++ L + H N+
Sbjct: 26 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 85
Query: 668 VSLVGY------CDEEGEQMLVYEFMS---NGTLRDQ-LSAKSKEPLGFAMRLSIALGSS 717
+ L+ +E + LV M N ++ Q L+ + L + +
Sbjct: 86 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL-------- 137
Query: 718 RGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVV 777
RG+ Y+H+ AD + HRD+K SN+ ++ K+ DFGL+R ++ G V
Sbjct: 138 RGLKYIHS-AD--IIHRDLKPSNLAVNEDSELKILDFGLARHTD-DEMTGYV-------- 185
Query: 778 KGTPGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLTG 813
T Y PE L +++ D++S+G + ELLTG
Sbjct: 186 -ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 221
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 98/218 (44%), Gaps = 26/218 (11%)
Query: 611 FNSSTQIGQGGYGKVYK------GILPDGTVVAVKRAQEGSLQG--EKEFLTEIQFLSRL 662
+++ ++G G + V K G+ + KR + S +G ++ E+ L +
Sbjct: 13 YDTGEELGSGKFAVVKKCREKSTGLQYAAKFIK-KRRTKSSRRGVSREDIEREVSILKEI 71
Query: 663 HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILY 722
H N+++L + + + +L+ E ++ G L D L+ KE L G+ Y
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLA--EKESLTEEEATEFLKQILNGVYY 129
Query: 723 LHTEADPPVFHRDIKASNI-LLDH---KFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVK 778
LH+ + H D+K NI LLD K K+ DFGL+ I + +
Sbjct: 130 LHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--------KIDFGNEFKNIF 178
Query: 779 GTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQP 816
GTP ++ PE L ++D++S+GV+ LL+G P
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 91/215 (42%), Gaps = 23/215 (10%)
Query: 609 NNFNSSTQIGQGGYGKVY-KGILPDGTVVAVK---RAQEGSLQGEKEFLTEIQFLSRLHH 664
+ F IG G +G+V + G A+K + + L+ + L E + L ++
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 665 RNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLS--AKSKEPLGFAMRLSIALGSSRGILY 722
LV L + +V E++ G + L + EP I L Y
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE----Y 156
Query: 723 LHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPG 782
LH+ + +RD+K N+L+D + KVADFG ++ ++G + + GTP
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAK-----RVKG-----RTWXLCGTPE 203
Query: 783 YLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPI 817
YL PE L+ D ++LGV+ E+ G P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 98/218 (44%), Gaps = 26/218 (11%)
Query: 611 FNSSTQIGQGGYGKVYK------GILPDGTVVAVKRAQEGSLQG--EKEFLTEIQFLSRL 662
+++ ++G G + V K G+ + KR + S +G ++ E+ L +
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIK-KRRTKSSRRGVSREDIEREVSILKEI 71
Query: 663 HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILY 722
H N+++L + + + +L+ E ++ G L D L+ KE L G+ Y
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLA--EKESLTEEEATEFLKQILNGVYY 129
Query: 723 LHTEADPPVFHRDIKASNI-LLDH---KFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVK 778
LH+ + H D+K NI LLD K K+ DFGL+ I + +
Sbjct: 130 LHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--------KIDFGNEFKNIF 178
Query: 779 GTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQP 816
GTP ++ PE L ++D++S+GV+ LL+G P
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 98/218 (44%), Gaps = 26/218 (11%)
Query: 611 FNSSTQIGQGGYGKVYK------GILPDGTVVAVKRAQEGSLQG--EKEFLTEIQFLSRL 662
+++ ++G G + V K G+ + KR + S +G ++ E+ L +
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIK-KRRTKSSRRGVSREDIEREVSILKEI 70
Query: 663 HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILY 722
H N+++L + + + +L+ E ++ G L D L+ KE L G+ Y
Sbjct: 71 QHPNVITLHEVYENKTDVILILELVAGGELFDFLA--EKESLTEEEATEFLKQILNGVYY 128
Query: 723 LHTEADPPVFHRDIKASNI-LLDH---KFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVK 778
LH+ + H D+K NI LLD K K+ DFGL+ I + +
Sbjct: 129 LHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--------KIDFGNEFKNIF 177
Query: 779 GTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQP 816
GTP ++ PE L ++D++S+GV+ LL+G P
Sbjct: 178 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 215
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 98/218 (44%), Gaps = 26/218 (11%)
Query: 611 FNSSTQIGQGGYGKVYK------GILPDGTVVAVKRAQEGSLQG--EKEFLTEIQFLSRL 662
+++ ++G G + V K G+ + KR + S +G ++ E+ L +
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIK-KRRTKSSRRGVSREDIEREVSILKEI 70
Query: 663 HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILY 722
H N+++L + + + +L+ E ++ G L D L+ KE L G+ Y
Sbjct: 71 QHPNVITLHEVYENKTDVILILELVAGGELFDFLA--EKESLTEEEATEFLKQILNGVYY 128
Query: 723 LHTEADPPVFHRDIKASNI-LLDH---KFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVK 778
LH+ + H D+K NI LLD K K+ DFGL+ I + +
Sbjct: 129 LHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--------KIDFGNEFKNIF 177
Query: 779 GTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQP 816
GTP ++ PE L ++D++S+GV+ LL+G P
Sbjct: 178 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 215
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 98/218 (44%), Gaps = 26/218 (11%)
Query: 611 FNSSTQIGQGGYGKVYK------GILPDGTVVAVKRAQEGSLQG--EKEFLTEIQFLSRL 662
+++ ++G G + V K G+ + KR + S +G ++ E+ L +
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIK-KRRTKSSRRGVSREDIEREVSILKEI 71
Query: 663 HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILY 722
H N+++L + + + +L+ E ++ G L D L+ KE L G+ Y
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLA--EKESLTEEEATEFLKQILNGVYY 129
Query: 723 LHTEADPPVFHRDIKASNI-LLDH---KFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVK 778
LH+ + H D+K NI LLD K K+ DFGL+ I + +
Sbjct: 130 LHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--------KIDFGNEFKNIF 178
Query: 779 GTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQP 816
GTP ++ PE L ++D++S+GV+ LL+G P
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 94/212 (44%), Gaps = 37/212 (17%)
Query: 617 IGQGGYGKV---YKGILPDGTVVAVKRAQE--GSLQGEKEFLTEIQFLSRLHHRNLVSLV 671
+G G YG V Y L VAVK+ SL + E++ L L H N++ L+
Sbjct: 36 VGSGAYGSVCSAYDARLRQK--VAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 672 GY------CDEEGEQMLVYEFMS---NGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILY 722
++ E LV M N ++ Q A S E + F + + RG+ Y
Sbjct: 94 DVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQ--ALSDEHVQFLVYQLL-----RGLKY 146
Query: 723 LHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPG 782
+H+ + HRD+K SN+ ++ ++ DFGL+R A ++ G V T
Sbjct: 147 IHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQAD-EEMTGYV---------ATRW 193
Query: 783 YLDPEYFLTHKLTDKS-DVYSLGVVFLELLTG 813
Y PE L +++ D++S+G + ELL G
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLQG 225
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 98/218 (44%), Gaps = 26/218 (11%)
Query: 611 FNSSTQIGQGGYGKVYK------GILPDGTVVAVKRAQEGSLQG--EKEFLTEIQFLSRL 662
+++ ++G G + V K G+ + KR + S +G ++ E+ L +
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIK-KRRTKSSRRGVSREDIEREVSILKEI 71
Query: 663 HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILY 722
H N+++L + + + +L+ E ++ G L D L+ KE L G+ Y
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLA--EKESLTEEEATEFLKQILNGVYY 129
Query: 723 LHTEADPPVFHRDIKASNI-LLDH---KFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVK 778
LH+ + H D+K NI LLD K K+ DFGL+ I + +
Sbjct: 130 LHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--------KIDFGNEFKNIF 178
Query: 779 GTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQP 816
GTP ++ PE L ++D++S+GV+ LL+G P
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 53/107 (49%), Gaps = 8/107 (7%)
Query: 710 LSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIV 769
L I + + + +LH++ + HRD+K SNI KV DFGL + E V
Sbjct: 167 LHIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 223
Query: 770 ----PAHVSTVVK-GTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELL 811
PA+ + + GT Y+ PE + + K D++SLG++ ELL
Sbjct: 224 LTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 114/278 (41%), Gaps = 37/278 (13%)
Query: 616 QIGQGGYGKVYKGILPDGTVVAVKRA--QEGSLQGEKEFLTEIQFLSRL--HHRNLVSLV 671
QIG GG KV++ + + A+K +E Q + EI +L++L H ++ L
Sbjct: 16 QIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 75
Query: 672 GYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPV 731
Y E +Y M G + K K+ + R S + +H +
Sbjct: 76 DY---EITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG---I 129
Query: 732 FHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYF-- 789
H D+K +N L+ K+ DFG++ PD +V S V GT Y+ PE
Sbjct: 130 VHSDLKPANFLIVDGML-KLIDFGIANQMQ-PDTTSVVKD--SQV--GTVNYMPPEAIKD 183
Query: 790 ---------LTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVI 840
K++ KSDV+SLG + + G P I Q S + ++I
Sbjct: 184 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ---------IINQISKLHAII 234
Query: 841 DGNMGSYPSECVEKFIKLALKCC-QDETDARPSMSEVM 877
D N + EK ++ LKCC + + R S+ E++
Sbjct: 235 DPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 272
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 10/100 (10%)
Query: 722 YLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSR-LAPVPDIEGIVPAHVSTVVKGT 780
YLH + + HRD+K NILL+ ++ DFG ++ L+P A + V GT
Sbjct: 129 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK-----QARANXFV-GT 179
Query: 781 PGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 820
Y+ PE SD+++LG + +L+ G+ P G
Sbjct: 180 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG 219
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 10/100 (10%)
Query: 722 YLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSR-LAPVPDIEGIVPAHVSTVVKGT 780
YLH + + HRD+K NILL+ ++ DFG ++ L+P A + V GT
Sbjct: 147 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK-----QARANXFV-GT 197
Query: 781 PGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 820
Y+ PE SD+++LG + +L+ G+ P G
Sbjct: 198 AQYVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPPFRAG 237
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 98/218 (44%), Gaps = 26/218 (11%)
Query: 611 FNSSTQIGQGGYGKVYK------GILPDGTVVAVKRAQEGSLQG--EKEFLTEIQFLSRL 662
+++ ++G G + V K G+ + KR + S +G ++ E+ L +
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIK-KRRTKSSRRGVSREDIEREVSILKEI 71
Query: 663 HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILY 722
H N+++L + + + +L+ E ++ G L D L+ KE L G+ Y
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLA--EKESLTEEEATEFLKQILNGVYY 129
Query: 723 LHTEADPPVFHRDIKASNI-LLDH---KFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVK 778
LH+ + H D+K NI LLD K K+ DFGL+ I + +
Sbjct: 130 LHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--------KIDFGNEFKNIF 178
Query: 779 GTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQP 816
GTP ++ PE L ++D++S+GV+ LL+G P
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 98/218 (44%), Gaps = 26/218 (11%)
Query: 611 FNSSTQIGQGGYGKVYK------GILPDGTVVAVKRAQEGSLQG--EKEFLTEIQFLSRL 662
+++ ++G G + V K G+ + KR + S +G ++ E+ L +
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIK-KRRTKSSRRGVSREDIEREVSILKEI 71
Query: 663 HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILY 722
H N+++L + + + +L+ E ++ G L D L+ KE L G+ Y
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLA--EKESLTEEEATEFLKQILNGVYY 129
Query: 723 LHTEADPPVFHRDIKASNI-LLDH---KFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVK 778
LH+ + H D+K NI LLD K K+ DFGL+ I + +
Sbjct: 130 LHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--------KIDFGNEFKNIF 178
Query: 779 GTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQP 816
GTP ++ PE L ++D++S+GV+ LL+G P
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 98/218 (44%), Gaps = 26/218 (11%)
Query: 611 FNSSTQIGQGGYGKVYK------GILPDGTVVAVKRAQEGSLQG--EKEFLTEIQFLSRL 662
+++ ++G G + V K G+ + KR + S +G ++ E+ L +
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIK-KRRTKSSRRGVSREDIEREVSILKEI 71
Query: 663 HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILY 722
H N+++L + + + +L+ E ++ G L D L+ KE L G+ Y
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLA--EKESLTEEEATEFLKQILNGVYY 129
Query: 723 LHTEADPPVFHRDIKASNI-LLDH---KFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVK 778
LH+ + H D+K NI LLD K K+ DFGL+ I + +
Sbjct: 130 LHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--------KIDFGNEFKNIF 178
Query: 779 GTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQP 816
GTP ++ PE L ++D++S+GV+ LL+G P
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 98/218 (44%), Gaps = 26/218 (11%)
Query: 611 FNSSTQIGQGGYGKVYK------GILPDGTVVAVKRAQEGSLQG--EKEFLTEIQFLSRL 662
+++ ++G G + V K G+ + KR + S +G ++ E+ L +
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIK-KRRTKSSRRGVSREDIEREVSILKEI 71
Query: 663 HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILY 722
H N+++L + + + +L+ E ++ G L D L+ KE L G+ Y
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLA--EKESLTEEEATEFLKQILNGVYY 129
Query: 723 LHTEADPPVFHRDIKASNI-LLDH---KFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVK 778
LH+ + H D+K NI LLD K K+ DFGL+ I + +
Sbjct: 130 LHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--------KIDFGNEFKNIF 178
Query: 779 GTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQP 816
GTP ++ PE L ++D++S+GV+ LL+G P
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 114/278 (41%), Gaps = 37/278 (13%)
Query: 616 QIGQGGYGKVYKGILPDGTVVAVKRA--QEGSLQGEKEFLTEIQFLSRL--HHRNLVSLV 671
QIG GG KV++ + + A+K +E Q + EI +L++L H ++ L
Sbjct: 15 QIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 74
Query: 672 GYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPV 731
Y E +Y M G + K K+ + R S + +H +
Sbjct: 75 DY---EITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG---I 128
Query: 732 FHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYF-- 789
H D+K +N L+ K+ DFG++ PD +V S V GT Y+ PE
Sbjct: 129 VHSDLKPANFLIVDGML-KLIDFGIANQMQ-PDTTSVVKD--SQV--GTVNYMPPEAIKD 182
Query: 790 ---------LTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVI 840
K++ KSDV+SLG + + G P I Q S + ++I
Sbjct: 183 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ---------IINQISKLHAII 233
Query: 841 DGNMGSYPSECVEKFIKLALKCC-QDETDARPSMSEVM 877
D N + EK ++ LKCC + + R S+ E++
Sbjct: 234 DPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 271
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 57/219 (26%), Positives = 97/219 (44%), Gaps = 27/219 (12%)
Query: 610 NFNSSTQIGQGGYGKVYK-GILPDGTVVAVKRAQEGSLQGEKEF---LTEIQFLSRLHHR 665
+F +++G G YG+V+K DG + AVKR+ +G K+ L E+ ++
Sbjct: 58 SFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMS-PFRGPKDRARKLAEVGSHEKVGQH 116
Query: 666 NLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGIL---- 721
+ EEG + + + +L+ E G ++ + G R L
Sbjct: 117 PCCVRLEQAWEEGGILYLQTELCGPSLQQHC-----EAWGASLPEAQVWGYLRDTLLALA 171
Query: 722 YLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTP 781
+LH++ + H D+K +NI L + K+ DFGL + + A V +G P
Sbjct: 172 HLHSQG---LVHLDVKPANIFLGPRGRCKLGDFGL--------LVELGTAGAGEVQEGDP 220
Query: 782 GYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 820
Y+ PE L +DV+SLG+ LE+ M+ + HG
Sbjct: 221 RYMAPE-LLQGSYGTAADVFSLGLTILEVACNME-LPHG 257
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 95/230 (41%), Gaps = 46/230 (20%)
Query: 617 IGQGGYGKVYKGI-LPDGTVVAVKRAQE------GSLQGEKEFLTEIQFLSRLH--HRNL 667
+G GG+G VY GI + D VA+K ++ G L E+ L ++ +
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 668 VSLVGYCDEEGEQMLVYE-----------FMSNGTLRDQLSAKSKEPLGFAMRLSIALGS 716
+ L+ + + +L+ E G L+++L+ + A+R G
Sbjct: 105 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG- 163
Query: 717 SRGILYLHTEADPPVFHRDIKASNILLD-HKFTAKVADFGLSRLAPVPDIEGIVPAHVST 775
V HRDIK NIL+D ++ K+ DFG L + V T
Sbjct: 164 --------------VLHRDIKDENILIDLNRGELKLIDFGSGAL---------LKDTVYT 200
Query: 776 VVKGTPGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLTGMQPISHGKNIV 824
GT Y PE+ H+ +S V+SLG++ +++ G P H + I+
Sbjct: 201 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 250
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 10/100 (10%)
Query: 722 YLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSR-LAPVPDIEGIVPAHVSTVVKGT 780
YLH + + HRD+K NILL+ ++ DFG ++ L+P A + V GT
Sbjct: 122 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK-----QARANXFV-GT 172
Query: 781 PGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 820
Y+ PE SD+++LG + +L+ G+ P G
Sbjct: 173 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG 212
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 10/100 (10%)
Query: 722 YLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSR-LAPVPDIEGIVPAHVSTVVKGT 780
YLH + + HRD+K NILL+ ++ DFG ++ L+P A + V GT
Sbjct: 123 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK-----QARANXFV-GT 173
Query: 781 PGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 820
Y+ PE SD+++LG + +L+ G+ P G
Sbjct: 174 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG 213
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 95/230 (41%), Gaps = 46/230 (20%)
Query: 617 IGQGGYGKVYKGI-LPDGTVVAVKRAQE------GSLQGEKEFLTEIQFLSRLH--HRNL 667
+G GG+G VY GI + D VA+K ++ G L E+ L ++ +
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 668 VSLVGYCDEEGEQMLVYE-----------FMSNGTLRDQLSAKSKEPLGFAMRLSIALGS 716
+ L+ + + +L+ E G L+++L+ + A+R G
Sbjct: 105 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG- 163
Query: 717 SRGILYLHTEADPPVFHRDIKASNILLD-HKFTAKVADFGLSRLAPVPDIEGIVPAHVST 775
V HRDIK NIL+D ++ K+ DFG L + V T
Sbjct: 164 --------------VLHRDIKDENILIDLNRGELKLIDFGSGAL---------LKDTVYT 200
Query: 776 VVKGTPGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLTGMQPISHGKNIV 824
GT Y PE+ H+ +S V+SLG++ +++ G P H + I+
Sbjct: 201 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 250
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 95/230 (41%), Gaps = 46/230 (20%)
Query: 617 IGQGGYGKVYKGI-LPDGTVVAVKRAQE------GSLQGEKEFLTEIQFLSRLH--HRNL 667
+G GG+G VY GI + D VA+K ++ G L E+ L ++ +
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 668 VSLVGYCDEEGEQMLVYE-----------FMSNGTLRDQLSAKSKEPLGFAMRLSIALGS 716
+ L+ + + +L+ E G L+++L+ + A+R G
Sbjct: 104 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG- 162
Query: 717 SRGILYLHTEADPPVFHRDIKASNILLD-HKFTAKVADFGLSRLAPVPDIEGIVPAHVST 775
V HRDIK NIL+D ++ K+ DFG L + V T
Sbjct: 163 --------------VLHRDIKDENILIDLNRGELKLIDFGSGAL---------LKDTVYT 199
Query: 776 VVKGTPGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLTGMQPISHGKNIV 824
GT Y PE+ H+ +S V+SLG++ +++ G P H + I+
Sbjct: 200 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 249
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 95/230 (41%), Gaps = 46/230 (20%)
Query: 617 IGQGGYGKVYKGI-LPDGTVVAVKRAQE------GSLQGEKEFLTEIQFLSRLH--HRNL 667
+G GG+G VY GI + D VA+K ++ G L E+ L ++ +
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 668 VSLVGYCDEEGEQMLVYE-----------FMSNGTLRDQLSAKSKEPLGFAMRLSIALGS 716
+ L+ + + +L+ E G L+++L+ + A+R G
Sbjct: 105 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG- 163
Query: 717 SRGILYLHTEADPPVFHRDIKASNILLD-HKFTAKVADFGLSRLAPVPDIEGIVPAHVST 775
V HRDIK NIL+D ++ K+ DFG L + V T
Sbjct: 164 --------------VLHRDIKDENILIDLNRGELKLIDFGSGAL---------LKDTVYT 200
Query: 776 VVKGTPGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLTGMQPISHGKNIV 824
GT Y PE+ H+ +S V+SLG++ +++ G P H + I+
Sbjct: 201 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 250
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 97/217 (44%), Gaps = 35/217 (16%)
Query: 611 FNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQE--GSLQGEKEFLTEIQFLSRLHHRNL 667
+ + + +G G YG V G VAVK+ S+ K E++ L + H N+
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 668 VSLVGY------CDEEGEQMLVYEFMS---NGTLRDQ-LSAKSKEPLGFAMRLSIALGSS 717
+ L+ +E + LV M N ++ Q L+ + L + +
Sbjct: 84 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL-------- 135
Query: 718 RGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVV 777
RG+ Y+H+ AD + HRD+K SN+ ++ K+ D+GL+R ++ G V
Sbjct: 136 RGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDYGLARHTD-DEMTGYV-------- 183
Query: 778 KGTPGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLTG 813
T Y PE L +++ D++S+G + ELLTG
Sbjct: 184 -ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 98/218 (44%), Gaps = 26/218 (11%)
Query: 611 FNSSTQIGQGGYGKVYK------GILPDGTVVAVKRAQEGSLQG--EKEFLTEIQFLSRL 662
+++ ++G G + V K G+ + KR + S +G ++ E+ L +
Sbjct: 13 YDTGEELGSGVFAVVKKCREKSTGLQYAAKFIK-KRRTKSSRRGVSREDIEREVSILKEI 71
Query: 663 HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILY 722
H N+++L + + + +L+ E ++ G L D L+ KE L G+ Y
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLA--EKESLTEEEATEFLKQILNGVYY 129
Query: 723 LHTEADPPVFHRDIKASNI-LLDH---KFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVK 778
LH+ + H D+K NI LLD K K+ DFGL+ I + +
Sbjct: 130 LHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--------KIDFGNEFKNIF 178
Query: 779 GTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQP 816
GTP ++ PE L ++D++S+GV+ LL+G P
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 95/230 (41%), Gaps = 46/230 (20%)
Query: 617 IGQGGYGKVYKGI-LPDGTVVAVKRAQE------GSLQGEKEFLTEIQFLSRLH--HRNL 667
+G GG+G VY GI + D VA+K ++ G L E+ L ++ +
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 668 VSLVGYCDEEGEQMLVYE-----------FMSNGTLRDQLSAKSKEPLGFAMRLSIALGS 716
+ L+ + + +L+ E G L+++L+ + A+R G
Sbjct: 104 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG- 162
Query: 717 SRGILYLHTEADPPVFHRDIKASNILLD-HKFTAKVADFGLSRLAPVPDIEGIVPAHVST 775
V HRDIK NIL+D ++ K+ DFG L + V T
Sbjct: 163 --------------VLHRDIKDENILIDLNRGELKLIDFGSGAL---------LKDTVYT 199
Query: 776 VVKGTPGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLTGMQPISHGKNIV 824
GT Y PE+ H+ +S V+SLG++ +++ G P H + I+
Sbjct: 200 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 249
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 95/230 (41%), Gaps = 46/230 (20%)
Query: 617 IGQGGYGKVYKGI-LPDGTVVAVKRAQE------GSLQGEKEFLTEIQFLSRLH--HRNL 667
+G GG+G VY GI + D VA+K ++ G L E+ L ++ +
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 668 VSLVGYCDEEGEQMLVYE-----------FMSNGTLRDQLSAKSKEPLGFAMRLSIALGS 716
+ L+ + + +L+ E G L+++L+ + A+R G
Sbjct: 105 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG- 163
Query: 717 SRGILYLHTEADPPVFHRDIKASNILLD-HKFTAKVADFGLSRLAPVPDIEGIVPAHVST 775
V HRDIK NIL+D ++ K+ DFG L + V T
Sbjct: 164 --------------VLHRDIKDENILIDLNRGELKLIDFGSGAL---------LKDTVYT 200
Query: 776 VVKGTPGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLTGMQPISHGKNIV 824
GT Y PE+ H+ +S V+SLG++ +++ G P H + I+
Sbjct: 201 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 250
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 10/100 (10%)
Query: 722 YLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSR-LAPVPDIEGIVPAHVSTVVKGT 780
YLH + + HRD+K NILL+ ++ DFG ++ L+P A + V GT
Sbjct: 124 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK-----QARANXFV-GT 174
Query: 781 PGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 820
Y+ PE SD+++LG + +L+ G+ P G
Sbjct: 175 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG 214
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 101/240 (42%), Gaps = 35/240 (14%)
Query: 608 TNNFNSSTQIGQGGYGKVYKGILPD---GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHH 664
++ + IG G +G ++ D +VAVK + G + ++ EI L H
Sbjct: 17 SDRYELVKDIGSGNFG--VARLMRDKQSNELVAVKYIERGE-KIDENVKREIINHRSLRH 73
Query: 665 RNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAK---SKEPLGFAMRLSIALGSSRGIL 721
N+V +V E+ S G L +++ S++ F + I+ G+
Sbjct: 74 PNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLIS-----GVS 128
Query: 722 YLHTEADPPVFHRDIKASNILLDHKFTA--KVADFGLSRLAPVPDIEGIVPAHVSTVVKG 779
Y H V HRD+K N LLD K+ DFG S+ ++ + + V G
Sbjct: 129 YCHAMQ---VCHRDLKLENTLLDGSPAPRLKICDFGYSK-------SSVLHSQPKSTV-G 177
Query: 780 TPGYLDPEYFLTHKLTDK-SDVYSLGVVFLELLTGM-------QPISHGKNIVREVNIAY 831
TP Y+ PE L + K +DV+S GV +L G +P + K I R +N+ Y
Sbjct: 178 TPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQY 237
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 97/238 (40%), Gaps = 46/238 (19%)
Query: 609 NNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQE------GSLQGEKEFLTEIQFLSR 661
+ + +G GG+G VY GI + D VA+K ++ G L E+ L +
Sbjct: 36 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 95
Query: 662 LH--HRNLVSLVGYCDEEGEQMLVYE-----------FMSNGTLRDQLSAKSKEPLGFAM 708
+ ++ L+ + + +L+ E G L+++L+ + A+
Sbjct: 96 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 155
Query: 709 RLSIALGSSRGILYLHTEADPPVFHRDIKASNILLD-HKFTAKVADFGLSRLAPVPDIEG 767
R G V HRDIK NIL+D ++ K+ DFG L
Sbjct: 156 RHCHNCG---------------VLHRDIKDENILIDLNRGELKLIDFGSGAL-------- 192
Query: 768 IVPAHVSTVVKGTPGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLTGMQPISHGKNIV 824
+ V T GT Y PE+ H+ +S V+SLG++ +++ G P H + I+
Sbjct: 193 -LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 249
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 72/177 (40%), Gaps = 20/177 (11%)
Query: 717 SRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTV 776
++G+ +L A HRD+ A NILL K K+ DFGL+R DI P +V
Sbjct: 210 AKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR-----DIYKD-PDYVRKG 260
Query: 777 VKGTP-GYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSS 834
P ++ PE T +SDV+S GV+ E+ + G P +
Sbjct: 261 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP---------GVKIDEE 311
Query: 835 MMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESD 891
+ +G P + + L C E RP+ SE++ L ++ + D
Sbjct: 312 FCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQQD 368
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 72/177 (40%), Gaps = 20/177 (11%)
Query: 717 SRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTV 776
++G+ +L A HRD+ A NILL K K+ DFGL+R DI P +V
Sbjct: 208 AKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR-----DIYKD-PDYVRKG 258
Query: 777 VKGTP-GYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSS 834
P ++ PE T +SDV+S GV+ E+ + G P +
Sbjct: 259 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP---------GVKIDEE 309
Query: 835 MMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESD 891
+ +G P + + L C E RP+ SE++ L ++ + D
Sbjct: 310 FCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQQD 366
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 51.2 bits (121), Expect = 3e-06, Method: Composition-based stats.
Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 10/100 (10%)
Query: 722 YLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSR-LAPVPDIEGIVPAHVSTVVKGT 780
YLH + + HRD+K NILL+ ++ DFG ++ L+P A + V GT
Sbjct: 125 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK-----QARANXFV-GT 175
Query: 781 PGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 820
Y+ PE SD+++LG + +L+ G+ P G
Sbjct: 176 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG 215
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 106/263 (40%), Gaps = 36/263 (13%)
Query: 616 QIGQGGYGKVYKGILPDGTVVAVKRA--QEGSLQGEKEFLTEIQFLSRL--HHRNLVSLV 671
QIG GG KV++ + + A+K +E Q + EI +L++L H ++ L
Sbjct: 63 QIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 122
Query: 672 GYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPV 731
Y E +Y M G + K K+ + R S + +H +
Sbjct: 123 DY---EITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG---I 176
Query: 732 FHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYF-- 789
H D+K +N L+ K+ DFG++ PD +V S V GT Y+ PE
Sbjct: 177 VHSDLKPANFLIVDGML-KLIDFGIANQMQ-PDTTSVVKD--SQV--GTVNYMPPEAIKD 230
Query: 790 ---------LTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVI 840
K++ KSDV+SLG + + G P I Q S + ++I
Sbjct: 231 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ---------IINQISKLHAII 281
Query: 841 DGNMGSYPSECVEKFIKLALKCC 863
D N + EK ++ LKCC
Sbjct: 282 DPNHEIEFPDIPEKDLQDVLKCC 304
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 98/218 (44%), Gaps = 26/218 (11%)
Query: 611 FNSSTQIGQGGYGKVYK------GILPDGTVVAVKRAQEGSLQG--EKEFLTEIQFLSRL 662
+++ ++G G + V K G+ + KR + S +G ++ E+ L +
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIK-KRRTKSSRRGVSREDIEREVSILKEI 71
Query: 663 HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILY 722
H N+++L + + + +L+ E ++ G L D L+ KE L G+ Y
Sbjct: 72 QHPNVITLHEVYENKTDVILIGELVAGGELFDFLA--EKESLTEEEATEFLKQILNGVYY 129
Query: 723 LHTEADPPVFHRDIKASNI-LLDH---KFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVK 778
LH+ + H D+K NI LLD K K+ DFGL+ I + +
Sbjct: 130 LHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--------KIDFGNEFKNIF 178
Query: 779 GTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQP 816
GTP ++ PE L ++D++S+GV+ LL+G P
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 47/99 (47%), Gaps = 8/99 (8%)
Query: 722 YLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTP 781
YLH + + HRD+K NILL+ ++ DFG +++ + A V GT
Sbjct: 145 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFV-----GTA 196
Query: 782 GYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 820
Y+ PE SD+++LG + +L+ G+ P G
Sbjct: 197 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG 235
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 68/166 (40%), Gaps = 20/166 (12%)
Query: 717 SRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTV 776
++G+ +L A HRD+ A NILL K K+ DFGL+R DI P +V
Sbjct: 201 AKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR-----DIYKD-PDYVRKG 251
Query: 777 VKGTP-GYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSS 834
P ++ PE T +SDV+S GV+ E+ + G P +
Sbjct: 252 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP---------GVKIDEE 302
Query: 835 MMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMREL 880
+ +G P + + L C E RP+ SE++ L
Sbjct: 303 FCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 348
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 90/209 (43%), Gaps = 31/209 (14%)
Query: 617 IGQGGYGKV---YKGILPDGTVVAVK---RAQEGSLQGEKEFLTEIQFLSRLHHRNLVSL 670
IG G G V + +L G VAVK R + ++ + E+ L ++H+N++SL
Sbjct: 30 IGSGAQGIVCAAFDTVL--GINVAVKKLSRPFQNQTHAKRAY-RELVLLKCVNHKNIISL 86
Query: 671 VGY------CDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLH 724
+ +E + LV E M + E + + + + GI +LH
Sbjct: 87 LNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLC-----GIKHLH 141
Query: 725 TEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYL 784
+ + HRD+K SNI++ T K+ DFGL+R A + T T Y
Sbjct: 142 SAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAST--------NFMMTPYVVTRYYR 190
Query: 785 DPEYFLTHKLTDKSDVYSLGVVFLELLTG 813
PE L + D++S+G + EL+ G
Sbjct: 191 APEVILGMGYKENVDIWSVGCIMGELVKG 219
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 92/210 (43%), Gaps = 33/210 (15%)
Query: 617 IGQGGYGKV---YKGILPDGTVVA-VKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVG 672
IG G G V Y IL + + R + ++ + E+ + ++H+N++ L+
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY-RELVLMKVVNHKNIIGLLN 90
Query: 673 Y------CDEEGEQMLVYEFMS---NGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYL 723
+E + +V E M + ++ +L + L + M + GI +L
Sbjct: 91 VFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLV--------GIKHL 142
Query: 724 HTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGY 783
H+ + HRD+K SNI++ T K+ DFGL+R A + + T T Y
Sbjct: 143 HSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAGT--------SFMMTPYVVTRYY 191
Query: 784 LDPEYFLTHKLTDKSDVYSLGVVFLELLTG 813
PE L + D++S+GV+ E++ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 50.8 bits (120), Expect = 3e-06, Method: Composition-based stats.
Identities = 57/230 (24%), Positives = 99/230 (43%), Gaps = 46/230 (20%)
Query: 617 IGQGGYGKVYKGI-LPDGTVVAVKRAQE------GSLQGEKEFLTEIQFLSRLHH--RNL 667
+G GG+G VY GI + D VA+K ++ G L E+ L ++ +
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 668 VSLVGYCDEEGEQMLV----------YEFMSN-GTLRDQLSAKSKEPLGFAMRLSIALGS 716
+ L+ + + +L+ ++F++ G L+++L+ + A+R G
Sbjct: 72 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG- 130
Query: 717 SRGILYLHTEADPPVFHRDIKASNILLD-HKFTAKVADFGLSRLAPVPDIEGIVPAHVST 775
V HRDIK NIL+D ++ K+ DFG L + V T
Sbjct: 131 --------------VLHRDIKDENILIDLNRGELKLIDFGSGAL---------LKDTVYT 167
Query: 776 VVKGTPGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLTGMQPISHGKNIV 824
GT Y PE+ H+ +S V+SLG++ +++ G P H + I+
Sbjct: 168 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 217
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 92/210 (43%), Gaps = 33/210 (15%)
Query: 617 IGQGGYGKV---YKGILPDGTVVA-VKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVG 672
IG G G V Y IL + + R + ++ + E+ + ++H+N++ L+
Sbjct: 32 IGSGAQGIVVAAYDAILERNVAIKKLSRPFQNQTHAKRAY-RELVLMKVVNHKNIIGLLN 90
Query: 673 Y------CDEEGEQMLVYEFMS---NGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYL 723
+E + +V E M + ++ +L + L + M + GI +L
Sbjct: 91 VFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLV--------GIKHL 142
Query: 724 HTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGY 783
H+ + HRD+K SNI++ T K+ DFGL+R A + + T T Y
Sbjct: 143 HSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAGT--------SFMMTPYVVTRYY 191
Query: 784 LDPEYFLTHKLTDKSDVYSLGVVFLELLTG 813
PE L + D++S+GV+ E++ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 85/215 (39%), Gaps = 36/215 (16%)
Query: 617 IGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGE-----------KEFLTEIQFLSRLHHR 665
I G YG V G+ +G VA+KR G K L EI+ L+ HH
Sbjct: 30 ISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHP 89
Query: 666 NLVSL----VGYCDEEGEQM-LVYEFMSNG---TLRDQLSAKSKEPLGFAMRLSIALGSS 717
N++ L V + + ++ LV E M + DQ S + + + M I LG
Sbjct: 90 NILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFM-YHILLG-- 146
Query: 718 RGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVV 777
LH + V HRD+ NILL + DF L+R E A+ + V
Sbjct: 147 -----LHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAR-------EDTADANKTHYV 194
Query: 778 KGTPGYLDPEYFLTHK-LTDKSDVYSLGVVFLELL 811
Y PE + K T D++S G V E+
Sbjct: 195 THR-WYRAPELVMQFKGFTKLVDMWSAGCVMAEMF 228
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 68/166 (40%), Gaps = 20/166 (12%)
Query: 717 SRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTV 776
++G+ +L A HRD+ A NILL K K+ DFGL+R DI P +V
Sbjct: 203 AKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR-----DIYKD-PDYVRKG 253
Query: 777 VKGTP-GYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSS 834
P ++ PE T +SDV+S GV+ E+ + G P +
Sbjct: 254 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP---------GVKIDEE 304
Query: 835 MMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMREL 880
+ +G P + + L C E RP+ SE++ L
Sbjct: 305 FCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 350
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 75/182 (41%), Gaps = 20/182 (10%)
Query: 701 KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 760
KEP+ +S + +RG+ +L + HRD+ A NILL K+ DFGL+R
Sbjct: 193 KEPITMEDLISYSFQVARGMEFLSSRK---CIHRDLAARNILLSENNVVKICDFGLAR-- 247
Query: 761 PVPDIEGIVPAHVSTVVKGTP-GYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPIS 818
DI P +V P ++ PE + KSDV+S GV+ E+ + G P
Sbjct: 248 ---DIYK-NPDYVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYP 303
Query: 819 HGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMR 878
+ + +G P + ++ L C + RP +E++
Sbjct: 304 ---------GVQMDEDFCSRLREGMRMRAPEYSTPEIYQIMLDCWHRDPKERPRFAELVE 354
Query: 879 EL 880
+L
Sbjct: 355 KL 356
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 55/103 (53%), Gaps = 9/103 (8%)
Query: 606 LATNNFNSSTQIGQGGYGKVYK----GIL--PDGTVVAVKRAQEGSLQGE-KEFLTEIQF 658
A +G+G +GKV + GI P VAVK +EG+ E K +TE++
Sbjct: 24 FARERLKLGKSLGRGAFGKVVQASAFGIKKSPTCRTVAVKMLKEGATASEYKALMTELKI 83
Query: 659 LSRL-HHRNLVSLVGYCDEE-GEQMLVYEFMSNGTLRDQLSAK 699
L+ + HH N+V+L+G C ++ G M++ E+ G L + L +K
Sbjct: 84 LTHIGHHLNVVNLLGACTKQGGPLMVIVEYCKYGNLSNYLKSK 126
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 96/245 (39%), Gaps = 43/245 (17%)
Query: 609 NNFNSSTQIGQGGYGKVYKGILPDGTV-VAVKRAQE--GSLQGEKEFLTEIQFLSRLHHR 665
+N+ IG+G YG VY + VA+K+ L K L EI L+RL
Sbjct: 28 DNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSD 87
Query: 666 NLVSLVGYCDEEG-----EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMR--LSIALGSSR 718
++ L E E +V E + L K P+ + +I
Sbjct: 88 YIIRLHDLIIPEDLLKFDELYIVLEIADSD-----LKKLFKTPIFLTEQHVKTILYNLLL 142
Query: 719 GILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSR-------------------- 758
G ++H + HRD+K +N LL+ + K+ DFGL+R
Sbjct: 143 GEKFIHESG---IIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEEN 199
Query: 759 LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHK-LTDKSDVYSLGVVFLELLTGMQPI 817
P P + + S VV T Y PE L + T+ D++S G +F ELL M+
Sbjct: 200 EEPGPHNKNLKKQLTSHVV--TRWYRAPELILLQENYTNSIDIWSTGCIFAELLNMMK-- 255
Query: 818 SHGKN 822
SH N
Sbjct: 256 SHINN 260
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 88/207 (42%), Gaps = 27/207 (13%)
Query: 617 IGQGGYGKV---YKGILPDGTVVA-VKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVG 672
IG G G V Y IL + + R + ++ + E+ + ++H+N++ L+
Sbjct: 34 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIIGLLN 92
Query: 673 Y------CDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTE 726
+E + +V E M + E + + + + GI +LH+
Sbjct: 93 VFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLC-----GIKHLHSA 147
Query: 727 ADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDP 786
+ HRD+K SNI++ T K+ DFGL+R A G V VV T Y P
Sbjct: 148 G---IIHRDLKPSNIVVKSDCTLKILDFGLARTA------GTSFMMVPFVV--TRYYRAP 196
Query: 787 EYFLTHKLTDKSDVYSLGVVFLELLTG 813
E L + D++S+G + E++ G
Sbjct: 197 EVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 85/215 (39%), Gaps = 36/215 (16%)
Query: 617 IGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGE-----------KEFLTEIQFLSRLHHR 665
I G YG V G+ +G VA+KR G K L EI+ L+ HH
Sbjct: 30 ISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHP 89
Query: 666 NLVSL----VGYCDEEGEQM-LVYEFMSNG---TLRDQLSAKSKEPLGFAMRLSIALGSS 717
N++ L V + + ++ LV E M + DQ S + + + M I LG
Sbjct: 90 NILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFM-YHILLG-- 146
Query: 718 RGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVV 777
LH + V HRD+ NILL + DF L+R E A+ + V
Sbjct: 147 -----LHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAR-------EDTADANKTHYV 194
Query: 778 KGTPGYLDPEYFLTHK-LTDKSDVYSLGVVFLELL 811
Y PE + K T D++S G V E+
Sbjct: 195 THR-WYRAPELVMQFKGFTKLVDMWSAGCVMAEMF 228
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 10/100 (10%)
Query: 722 YLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSR-LAPVPDIEGIVPAHVSTVVKGT 780
YLH + + HRD+K NILL+ ++ DFG ++ L+P A ++ V GT
Sbjct: 147 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK-----QARANSFV-GT 197
Query: 781 PGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 820
Y+ PE + SD+++LG + +L+ G+ P G
Sbjct: 198 AQYVSPELLTEKSASKSSDLWALGCIIYQLVAGLPPFRAG 237
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 89/207 (42%), Gaps = 20/207 (9%)
Query: 617 IGQGGYGKVYKGILPDGTVV--AVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYC 674
IG+G +G+V K + GT + A K+ + ++ F EI+ + L H N++ L
Sbjct: 34 IGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETF 92
Query: 675 DEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHR 734
++ + LV E + G L +++ K A R+ + S+ + Y H V HR
Sbjct: 93 EDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSA--VAYCHKLN---VAHR 147
Query: 735 DIKASNILL---DHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT 791
D+K N L K+ DFGL+ P + GTP Y+ P+ L
Sbjct: 148 DLKPENFLFLTDSPDSPLKLIDFGLA--------ARFKPGKMMRTKVGTPYYVSPQ-VLE 198
Query: 792 HKLTDKSDVYSLGVVFLELLTGMQPIS 818
+ D +S GV+ LL G P S
Sbjct: 199 GLYGPECDEWSAGVMMYVLLCGYPPFS 225
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 89/207 (42%), Gaps = 20/207 (9%)
Query: 617 IGQGGYGKVYKGILPDGTVV--AVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYC 674
IG+G +G+V K + GT + A K+ + ++ F EI+ + L H N++ L
Sbjct: 17 IGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETF 75
Query: 675 DEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHR 734
++ + LV E + G L +++ K A R+ + S+ + Y H V HR
Sbjct: 76 EDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSA--VAYCHKLN---VAHR 130
Query: 735 DIKASNILL---DHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT 791
D+K N L K+ DFGL+ P + GTP Y+ P+ L
Sbjct: 131 DLKPENFLFLTDSPDSPLKLIDFGLA--------ARFKPGKMMRTKVGTPYYVSPQ-VLE 181
Query: 792 HKLTDKSDVYSLGVVFLELLTGMQPIS 818
+ D +S GV+ LL G P S
Sbjct: 182 GLYGPECDEWSAGVMMYVLLCGYPPFS 208
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 89/209 (42%), Gaps = 31/209 (14%)
Query: 617 IGQGGYGKV---YKGILPDGTVVAVK---RAQEGSLQGEKEFLTEIQFLSRLHHRNLVSL 670
IG G G V + +L G VAVK R + ++ + E+ L ++H+N++SL
Sbjct: 32 IGSGAQGIVCAAFDTVL--GINVAVKKLSRPFQNQTHAKRAY-RELVLLKCVNHKNIISL 88
Query: 671 VGY------CDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLH 724
+ +E + LV E M + E + + + + GI +LH
Sbjct: 89 LNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLC-----GIKHLH 143
Query: 725 TEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYL 784
+ + HRD+K SNI++ T K+ DFGL+R A + T T Y
Sbjct: 144 SAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--------CTNFMMTPYVVTRYYR 192
Query: 785 DPEYFLTHKLTDKSDVYSLGVVFLELLTG 813
PE L D++S+G + EL+ G
Sbjct: 193 APEVILGMGYAANVDIWSVGCIMGELVKG 221
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 100/245 (40%), Gaps = 25/245 (10%)
Query: 609 NNFN--SSTQIGQGGYGKVYKGILPD-GTVVAVK--RAQEGSLQGEKEFLTEIQFLSRLH 663
NNF +S ++G+G + V + I G A K + + E L EI L
Sbjct: 27 NNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAK 86
Query: 664 HR-NLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILY 722
+++L + E +L+ E+ + G + + E + + + G+ Y
Sbjct: 87 SCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYY 146
Query: 723 LHTEADPPVFHRDIKASNILLDHKF---TAKVADFGLSRLAPVPDIEGIVPAHVSTVVKG 779
LH + H D+K NILL + K+ DFG+SR I A + G
Sbjct: 147 LHQNN---IVHLDLKPQNILLSSIYPLGDIKIVDFGMSR--------KIGHACELREIMG 195
Query: 780 TPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNI-----VREVNIAYQSS 834
TP YL PE +T +D++++G++ LLT P N + +VN+ Y
Sbjct: 196 TPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEE 255
Query: 835 MMFSV 839
SV
Sbjct: 256 TFSSV 260
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 90/223 (40%), Gaps = 39/223 (17%)
Query: 609 NNFNSSTQIGQGGYGKVY------------KGILPDGTVVAVKRAQEGSLQGEKEFLTEI 656
+ F+ +G G +G+V IL VV +K+ + L E
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT--------LNEK 113
Query: 657 QFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLS--AKSKEPLGFAMRLSIAL 714
+ L ++ LV L + +V E+++ G + L + EP I L
Sbjct: 114 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVL 173
Query: 715 GSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVS 774
YLH+ + +RD+K N+L+D + +V DFG ++ ++G +
Sbjct: 174 TFE----YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKG-----AT 216
Query: 775 TVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPI 817
+ GTP YL PE L+ D ++LGV+ E+ G P
Sbjct: 217 WTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 99/240 (41%), Gaps = 35/240 (14%)
Query: 608 TNNFNSSTQIGQGGYGKVYKGILPD---GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHH 664
++ + IG G +G ++ D +VAVK + G + EI L H
Sbjct: 18 SDRYELVKDIGSGNFG--VARLMRDKQSNELVAVKYIERGE-KIAANVKREIINHRSLRH 74
Query: 665 RNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAK---SKEPLGFAMRLSIALGSSRGIL 721
N+V +V E+ S G L +++ S++ F + I+ G+
Sbjct: 75 PNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLIS-----GVS 129
Query: 722 YLHTEADPPVFHRDIKASNILLDHKFTA--KVADFGLSRLAPVPDIEGIVPAHVSTVVKG 779
Y H V HRD+K N LLD K+ DFG S+ ++ + + V G
Sbjct: 130 YCHAMQ---VCHRDLKLENTLLDGSPAPRLKICDFGYSK-------SSVLHSQPKSTV-G 178
Query: 780 TPGYLDPEYFLTHKLTDK-SDVYSLGVVFLELLTGM-------QPISHGKNIVREVNIAY 831
TP Y+ PE L + K +DV+S GV +L G +P + K I R +N+ Y
Sbjct: 179 TPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQY 238
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 125/318 (39%), Gaps = 51/318 (16%)
Query: 584 RHSSKTSIKIDGVRSFTYGEMALATNNFNSSTQIGQGGYGKVYKGILPDGT---VVAVKR 640
R +S+TSI + E + IG+G +G+VY G ++ ++R
Sbjct: 16 RKASQTSIFLQ--------EWDIPFEQLEIGELIGKGRFGQVYHGRWHGEVAIRLIDIER 67
Query: 641 AQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKS 700
E L K F E+ + H N+V +G C ++ TL + +
Sbjct: 68 DNEDQL---KAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYS-VVRDA 123
Query: 701 KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 760
K L IA +G+ YLH + + H+D+K+ N+ D+ + DFGL
Sbjct: 124 KIVLDVNKTRQIAQEIVKGMGYLHAKG---ILHKDLKSKNVFYDNGKVV-ITDFGLF--- 176
Query: 761 PVPDIEGIVPAHVST----VVKGTPGYLDPEYFLTHK---------LTDKSDVYSLGVVF 807
I G++ A + G +L PE + SDV++LG ++
Sbjct: 177 ---SISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIW 233
Query: 808 LELLTGMQPISH--GKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQD 865
EL P + I+ ++ + ++ S I MG S+ + L C
Sbjct: 234 YELHAREWPFKTQPAEAIIWQMGTGMKPNL--SQI--GMGKEISDIL-------LFCWAF 282
Query: 866 ETDARPSMSEVMRELESI 883
E + RP+ +++M LE +
Sbjct: 283 EQEERPTFTKLMDMLEKL 300
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 90/223 (40%), Gaps = 39/223 (17%)
Query: 609 NNFNSSTQIGQGGYGKVY------------KGILPDGTVVAVKRAQEGSLQGEKEFLTEI 656
+ F+ +G G +G+V IL VV +K+ + L E
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT--------LNEK 92
Query: 657 QFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLS--AKSKEPLGFAMRLSIAL 714
+ L ++ LV L + +V E+++ G + L + EP I L
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 715 GSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVS 774
YLH+ + +RD+K N+L+D + +V DFG ++ ++G +
Sbjct: 153 TFE----YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKG-----RT 195
Query: 775 TVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPI 817
+ GTP YL PE L+ D ++LGV+ E+ G P
Sbjct: 196 WXLXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 90/223 (40%), Gaps = 39/223 (17%)
Query: 609 NNFNSSTQIGQGGYGKVY------------KGILPDGTVVAVKRAQEGSLQGEKEFLTEI 656
+ F+ +G G +G+V IL VV +K+ + L E
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT--------LNEK 92
Query: 657 QFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLS--AKSKEPLGFAMRLSIAL 714
+ L ++ LV L + +V E+++ G + L + EP I L
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 715 GSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVS 774
YLH+ + +RD+K N+L+D + +V DFG ++ ++G +
Sbjct: 153 TFE----YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKG-----RT 195
Query: 775 TVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPI 817
+ GTP YL PE L+ D ++LGV+ E+ G P
Sbjct: 196 WXLAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 89/231 (38%), Gaps = 30/231 (12%)
Query: 609 NNFNSSTQIGQGGYGKVY----KGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHH 664
+N+ IG+G YG VY K + + V R E + K L EI L+RL
Sbjct: 26 DNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDC-KRILREITILNRLKS 84
Query: 665 RNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMR--LSIALGSSRGILY 722
++ L + ++ L K P+ +I G +
Sbjct: 85 DYIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLGENF 144
Query: 723 LHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRL-----------------APVPDI 765
+H + HRD+K +N LL+ + KV DFGL+R P P
Sbjct: 145 IHESG---IIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHN 201
Query: 766 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLTGMQ 815
+ + S VV T Y PE L + KS D++S G +F ELL +Q
Sbjct: 202 KNLKKQLTSHVV--TRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQ 250
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 10/100 (10%)
Query: 722 YLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSR-LAPVPDIEGIVPAHVSTVVKGT 780
YLH + + HRD+K NILL+ ++ DFG ++ L+P A ++ V GT
Sbjct: 148 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK-----QARANSFV-GT 198
Query: 781 PGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 820
Y+ PE SD+++LG + +L+ G+ P G
Sbjct: 199 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG 238
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 10/100 (10%)
Query: 722 YLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSR-LAPVPDIEGIVPAHVSTVVKGT 780
YLH + + HRD+K NILL+ ++ DFG ++ L+P A ++ V GT
Sbjct: 144 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK-----QARANSFV-GT 194
Query: 781 PGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 820
Y+ PE SD+++LG + +L+ G+ P G
Sbjct: 195 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG 234
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 87/207 (42%), Gaps = 27/207 (13%)
Query: 617 IGQGGYGKV---YKGILPDGTVVA-VKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVG 672
IG G G V Y IL + + R + ++ + E+ + ++H+N++ L+
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIIGLLN 90
Query: 673 Y------CDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTE 726
+E + +V E M + E + + + + GI +LH+
Sbjct: 91 VFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLC-----GIKHLHSA 145
Query: 727 ADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDP 786
+ HRD+K SNI++ T K+ DFGL+R A G VV T Y P
Sbjct: 146 G---IIHRDLKPSNIVVKSDCTLKILDFGLARTA------GTSFMMTPEVV--TRYYRAP 194
Query: 787 EYFLTHKLTDKSDVYSLGVVFLELLTG 813
E L + D++S+G + E++ G
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 89/215 (41%), Gaps = 23/215 (10%)
Query: 609 NNFNSSTQIGQGGYGKVY-KGILPDGTVVAVKRAQEGSLQGEKEF---LTEIQFLSRLHH 664
+ F +G G +G+V + G A+K + + KE L E + L ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 665 RNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLS--AKSKEPLGFAMRLSIALGSSRGILY 722
LV L + +V E+ G + L + EP I L Y
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE----Y 156
Query: 723 LHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPG 782
LH+ + +RD+K N+++D + KV DFGL++ ++G + + GTP
Sbjct: 157 LHS---LDLIYRDLKPENLMIDQQGYIKVTDFGLAK-----RVKG-----RTWXLCGTPE 203
Query: 783 YLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPI 817
YL PE L+ D ++LGV+ E+ G P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 49.7 bits (117), Expect = 8e-06, Method: Composition-based stats.
Identities = 70/292 (23%), Positives = 116/292 (39%), Gaps = 54/292 (18%)
Query: 617 IGQGGYGKVYKG-ILPDGTVVAVKRAQEGSLQGEKEFLT------EIQFLSRLH----HR 665
+G+GG+G V+ G L D VA+K + G E+ L ++ H
Sbjct: 39 LGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHP 98
Query: 666 NLVSLVGYCDEEGEQMLVYEF-MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLH 724
++ L+ + + + MLV E + L D ++ K PLG I + H
Sbjct: 99 GVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKG--PLGEGPSRCFFGQVVAAIQHCH 156
Query: 725 TEADPPVFHRDIKASNILLD-HKFTAKVADFGLSRL---APVPDIEGIVPAHVSTVVKGT 780
+ V HRDIK NIL+D + AK+ DFG L P D + GT
Sbjct: 157 SRG---VVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPYTDFD------------GT 201
Query: 781 PGYLDPEYFLTHKLTD-KSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSV 839
Y PE+ H+ + V+SLG++ +++ G P + I+ ++ + F
Sbjct: 202 RVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEIL-------EAELHF-- 252
Query: 840 IDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESD 891
P+ L +C + +RPS+ E++ + W P D
Sbjct: 253 --------PAHVSPDCCALIRRCLAPKPSSRPSLEEILLD---PWMQTPAED 293
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 96/217 (44%), Gaps = 35/217 (16%)
Query: 611 FNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQE--GSLQGEKEFLTEIQFLSRLHHRNL 667
+ + + +G G YG V G VAVK+ S+ K E++ L + H N+
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 668 VSLVGY------CDEEGEQMLVYEFMS---NGTLRDQ-LSAKSKEPLGFAMRLSIALGSS 717
+ L+ +E + LV M N ++ Q L+ + L + +
Sbjct: 84 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL-------- 135
Query: 718 RGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVV 777
RG+ Y+H+ AD + HRD+K SN+ ++ K+ FGL+R ++ G V
Sbjct: 136 RGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILGFGLARHTD-DEMTGYV-------- 183
Query: 778 KGTPGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLTG 813
T Y PE L +++ D++S+G + ELLTG
Sbjct: 184 -ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 87/207 (42%), Gaps = 27/207 (13%)
Query: 617 IGQGGYGKV---YKGILPDGTVVA-VKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVG 672
IG G G V Y IL + + R + ++ + E+ + ++H+N++ L+
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIIGLLN 90
Query: 673 Y------CDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTE 726
+E + +V E M + E + + + + GI +LH+
Sbjct: 91 VFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLC-----GIKHLHSA 145
Query: 727 ADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDP 786
+ HRD+K SNI++ T K+ DFGL+R A + + T T Y P
Sbjct: 146 G---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--------SFMMTPYVVTRYYRAP 194
Query: 787 EYFLTHKLTDKSDVYSLGVVFLELLTG 813
E L + D++S+G + E++ G
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 10/100 (10%)
Query: 722 YLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSR-LAPVPDIEGIVPAHVSTVVKGT 780
YLH + + HRD+K NILL+ ++ DFG ++ L+P A + V GT
Sbjct: 152 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK-----QARANXFV-GT 202
Query: 781 PGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 820
Y+ PE SD+++LG + +L+ G+ P G
Sbjct: 203 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG 242
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 49.7 bits (117), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 87/207 (42%), Gaps = 27/207 (13%)
Query: 617 IGQGGYGKV---YKGILPDGTVVA-VKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVG 672
IG G G V Y IL + + R + ++ + E+ + ++H+N++ L+
Sbjct: 33 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIIGLLN 91
Query: 673 Y------CDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTE 726
+E + +V E M + E + + + + GI +LH+
Sbjct: 92 VFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLC-----GIKHLHSA 146
Query: 727 ADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDP 786
+ HRD+K SNI++ T K+ DFGL+R A + + T T Y P
Sbjct: 147 G---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--------SFMMTPYVVTRYYRAP 195
Query: 787 EYFLTHKLTDKSDVYSLGVVFLELLTG 813
E L + D++S+G + E++ G
Sbjct: 196 EVILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 49.7 bits (117), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 10/100 (10%)
Query: 722 YLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSR-LAPVPDIEGIVPAHVSTVVKGT 780
YLH + + HRD+K NILL+ ++ DFG ++ L+P A + V GT
Sbjct: 147 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK-----QARANXFV-GT 197
Query: 781 PGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 820
Y+ PE SD+++LG + +L+ G+ P G
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG 237
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 13/96 (13%)
Query: 722 YLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTP 781
YLH+ + +RD+K N+L+D + KVADFG ++ ++G + + GTP
Sbjct: 157 YLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAK-----RVKG-----RTWXLCGTP 203
Query: 782 GYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPI 817
YL PE L+ D ++LGV+ E+ G P
Sbjct: 204 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 10/100 (10%)
Query: 722 YLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSR-LAPVPDIEGIVPAHVSTVVKGT 780
YLH + + HRD+K NILL+ ++ DFG ++ L+P A + V GT
Sbjct: 150 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK-----QARANXFV-GT 200
Query: 781 PGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 820
Y+ PE SD+++LG + +L+ G+ P G
Sbjct: 201 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG 240
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 10/100 (10%)
Query: 722 YLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSR-LAPVPDIEGIVPAHVSTVVKGT 780
YLH + + HRD+K NILL+ ++ DFG ++ L+P A + V GT
Sbjct: 145 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK-----QARANXFV-GT 195
Query: 781 PGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 820
Y+ PE SD+++LG + +L+ G+ P G
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG 235
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 10/100 (10%)
Query: 722 YLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSR-LAPVPDIEGIVPAHVSTVVKGT 780
YLH + + HRD+K NILL+ ++ DFG ++ L+P A + V GT
Sbjct: 145 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK-----QARANXFV-GT 195
Query: 781 PGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 820
Y+ PE SD+++LG + +L+ G+ P G
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG 235
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 10/100 (10%)
Query: 722 YLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSR-LAPVPDIEGIVPAHVSTVVKGT 780
YLH + + HRD+K NILL+ ++ DFG ++ L+P A + V GT
Sbjct: 147 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK-----QARANXFV-GT 197
Query: 781 PGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 820
Y+ PE SD+++LG + +L+ G+ P G
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG 237
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 87/205 (42%), Gaps = 27/205 (13%)
Query: 617 IGQGGYGKV---YKGILPDGTVVA-VKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVG 672
IG G G V Y +L + + R + ++ + E+ + ++H+N++SL+
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKXVNHKNIISLLN 90
Query: 673 Y------CDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTE 726
+E + LV E M + E + + + + GI +LH+
Sbjct: 91 VFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC-----GIKHLHSA 145
Query: 727 ADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDP 786
+ HRD+K SNI++ T K+ DFGL+R A + + T T Y P
Sbjct: 146 G---IIHRDLKPSNIVVKSDXTLKILDFGLARTAGT--------SFMMTPYVVTRYYRAP 194
Query: 787 EYFLTHKLTDKSDVYSLGVVFLELL 811
E L + D++S+G + E++
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 87/205 (42%), Gaps = 27/205 (13%)
Query: 617 IGQGGYGKV---YKGILPDGTVVA-VKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVG 672
IG G G V Y +L + + R + ++ + E+ + ++H+N++SL+
Sbjct: 70 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISLLN 128
Query: 673 Y------CDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTE 726
+E + LV E M + E + + + + GI +LH+
Sbjct: 129 VFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC-----GIKHLHSA 183
Query: 727 ADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDP 786
+ HRD+K SNI++ T K+ DFGL+R A + + T T Y P
Sbjct: 184 G---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--------SFMMTPYVVTRYYRAP 232
Query: 787 EYFLTHKLTDKSDVYSLGVVFLELL 811
E L + D++S+G + E++
Sbjct: 233 EVILGMGYKENVDIWSVGCIMGEMV 257
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 10/100 (10%)
Query: 722 YLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSR-LAPVPDIEGIVPAHVSTVVKGT 780
YLH + + HRD+K NILL+ ++ DFG ++ L+P A + V GT
Sbjct: 145 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK-----QARANXFV-GT 195
Query: 781 PGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 820
Y+ PE SD+++LG + +L+ G+ P G
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG 235
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 96/217 (44%), Gaps = 35/217 (16%)
Query: 611 FNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQE--GSLQGEKEFLTEIQFLSRLHHRNL 667
+ + + +G G YG V G VAVK+ S+ K E++ L + H N+
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 668 VSLVGY------CDEEGEQMLVYEFMS---NGTLRDQ-LSAKSKEPLGFAMRLSIALGSS 717
+ L+ +E + LV M N ++ Q L+ + L + +
Sbjct: 84 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL-------- 135
Query: 718 RGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVV 777
RG+ Y+H+ AD + HRD+K SN+ ++ K+ D GL+R ++ G V
Sbjct: 136 RGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDAGLARHTD-DEMTGYV-------- 183
Query: 778 KGTPGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLTG 813
T Y PE L +++ D++S+G + ELLTG
Sbjct: 184 -ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 90/223 (40%), Gaps = 39/223 (17%)
Query: 609 NNFNSSTQIGQGGYGKVY------------KGILPDGTVVAVKRAQEGSLQGEKEFLTEI 656
+ F+ +G G +G+V IL VV +K+ + L E
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT--------LNEK 92
Query: 657 QFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLS--AKSKEPLGFAMRLSIAL 714
+ L ++ LV L + +V E+++ G + L + EP I L
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 715 GSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVS 774
YLH+ + +RD+K N+L+D + +V DFG ++ ++G +
Sbjct: 153 TFE----YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKG-----RT 195
Query: 775 TVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPI 817
+ GTP YL PE L+ D ++LGV+ E+ G P
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 96/217 (44%), Gaps = 35/217 (16%)
Query: 611 FNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQE--GSLQGEKEFLTEIQFLSRLHHRNL 667
+ + + +G G YG V G VAVK+ S+ K E++ L + H N+
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 668 VSLVGY------CDEEGEQMLVYEFMS---NGTLRDQ-LSAKSKEPLGFAMRLSIALGSS 717
+ L+ +E + LV M N ++ Q L+ + L + +
Sbjct: 84 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL-------- 135
Query: 718 RGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVV 777
RG+ Y+H+ AD + HRD+K SN+ ++ K+ DF L+R ++ G V
Sbjct: 136 RGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDFYLARHTD-DEMTGYV-------- 183
Query: 778 KGTPGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLTG 813
T Y PE L +++ D++S+G + ELLTG
Sbjct: 184 -ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 90/223 (40%), Gaps = 39/223 (17%)
Query: 609 NNFNSSTQIGQGGYGKVY------------KGILPDGTVVAVKRAQEGSLQGEKEFLTEI 656
+ F+ +G G +G+V IL VV +K+ + L E
Sbjct: 42 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT--------LNEK 93
Query: 657 QFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLS--AKSKEPLGFAMRLSIAL 714
+ L ++ LV L + +V E+++ G + L + EP I L
Sbjct: 94 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVL 153
Query: 715 GSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVS 774
YLH+ + +RD+K N+L+D + +V DFG ++ ++G +
Sbjct: 154 TFE----YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKG-----RT 196
Query: 775 TVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPI 817
+ GTP YL PE L+ D ++LGV+ E+ G P
Sbjct: 197 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 90/223 (40%), Gaps = 39/223 (17%)
Query: 609 NNFNSSTQIGQGGYGKVY------------KGILPDGTVVAVKRAQEGSLQGEKEFLTEI 656
+ F+ +G G +G+V IL VV +K+ + L E
Sbjct: 28 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT--------LNEK 79
Query: 657 QFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLS--AKSKEPLGFAMRLSIAL 714
+ L ++ LV L + +V E+++ G + L + EP I L
Sbjct: 80 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVL 139
Query: 715 GSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVS 774
YLH+ + +RD+K N+L+D + +V DFG ++ ++G +
Sbjct: 140 TFE----YLHS---LDLIYRDLKPENLLIDEQGYIQVTDFGFAK-----RVKG-----RT 182
Query: 775 TVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPI 817
+ GTP YL PE L+ D ++LGV+ E+ G P
Sbjct: 183 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 225
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 90/223 (40%), Gaps = 39/223 (17%)
Query: 609 NNFNSSTQIGQGGYGKVY------------KGILPDGTVVAVKRAQEGSLQGEKEFLTEI 656
+ F+ +G G +G+V IL VV +K+ + L E
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT--------LNEK 92
Query: 657 QFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLS--AKSKEPLGFAMRLSIAL 714
+ L ++ LV L + +V E+++ G + L + EP I L
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVL 152
Query: 715 GSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVS 774
YLH+ + +RD+K N+L+D + +V DFG ++ ++G +
Sbjct: 153 TFE----YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKG-----RT 195
Query: 775 TVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPI 817
+ GTP YL PE L+ D ++LGV+ E+ G P
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 10/100 (10%)
Query: 722 YLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSR-LAPVPDIEGIVPAHVSTVVKGT 780
YLH + + HRD+K NILL+ ++ DFG ++ L+P A + V GT
Sbjct: 148 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK-----QARANXFV-GT 198
Query: 781 PGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 820
Y+ PE SD+++LG + +L+ G+ P G
Sbjct: 199 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG 238
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 87/207 (42%), Gaps = 27/207 (13%)
Query: 617 IGQGGYGKV---YKGILPDGTVVA-VKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVG 672
IG G G V Y IL + + R + ++ + E+ + ++H+N++ L+
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIIGLLN 90
Query: 673 Y------CDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTE 726
+E + +V E M + E + + + + GI +LH+
Sbjct: 91 VFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLC-----GIKHLHSA 145
Query: 727 ADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDP 786
+ HRD+K SNI++ T K+ DFGL+R A + + T T Y P
Sbjct: 146 G---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--------SFMMTPYVVTRYYRAP 194
Query: 787 EYFLTHKLTDKSDVYSLGVVFLELLTG 813
E L + D++S+G + E++ G
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 10/100 (10%)
Query: 722 YLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSR-LAPVPDIEGIVPAHVSTVVKGT 780
YLH + + HRD+K NILL+ ++ DFG ++ L+P A + V GT
Sbjct: 147 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK-----QARANXFV-GT 197
Query: 781 PGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 820
Y+ PE SD+++LG + +L+ G+ P G
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG 237
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 105/263 (39%), Gaps = 36/263 (13%)
Query: 616 QIGQGGYGKVYKGILPDGTVVAVKRA--QEGSLQGEKEFLTEIQFLSRL--HHRNLVSLV 671
QIG GG KV++ + + A+K +E Q + EI +L++L H ++ L
Sbjct: 63 QIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 122
Query: 672 GYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPV 731
Y E +Y M G + K K+ + R S + +H +
Sbjct: 123 DY---EITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG---I 176
Query: 732 FHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYF-- 789
H D+K +N L+ K+ DFG++ PD +V S V G Y+ PE
Sbjct: 177 VHSDLKPANFLIVDGML-KLIDFGIANQMQ-PDTTSVVKD--SQV--GAVNYMPPEAIKD 230
Query: 790 ---------LTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVI 840
K++ KSDV+SLG + + G P I Q S + ++I
Sbjct: 231 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ---------IINQISKLHAII 281
Query: 841 DGNMGSYPSECVEKFIKLALKCC 863
D N + EK ++ LKCC
Sbjct: 282 DPNHEIEFPDIPEKDLQDVLKCC 304
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 90/223 (40%), Gaps = 39/223 (17%)
Query: 609 NNFNSSTQIGQGGYGKVY------------KGILPDGTVVAVKRAQEGSLQGEKEFLTEI 656
+ F+ +G G +G+V IL VV +K+ + L E
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT--------LNEK 92
Query: 657 QFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLS--AKSKEPLGFAMRLSIAL 714
+ L ++ LV L + +V E+++ G + L + EP I L
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 715 GSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVS 774
YLH+ + +RD+K N+L+D + +V DFG ++ ++G +
Sbjct: 153 TFE----YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKG-----RT 195
Query: 775 TVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPI 817
+ GTP YL PE L+ D ++LGV+ E+ G P
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 10/100 (10%)
Query: 722 YLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSR-LAPVPDIEGIVPAHVSTVVKGT 780
YLH + + HRD+K NILL+ ++ DFG ++ L+P A + V GT
Sbjct: 147 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK-----QARANXFV-GT 197
Query: 781 PGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 820
Y+ PE SD+++LG + +L+ G+ P G
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG 237
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 90/223 (40%), Gaps = 39/223 (17%)
Query: 609 NNFNSSTQIGQGGYGKVY------------KGILPDGTVVAVKRAQEGSLQGEKEFLTEI 656
+ F+ +G G +G+V IL VV +K+ + L E
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT--------LNEK 92
Query: 657 QFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLS--AKSKEPLGFAMRLSIAL 714
+ L ++ LV L + +V E+++ G + L + EP I L
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVL 152
Query: 715 GSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVS 774
YLH+ + +RD+K N+L+D + +V DFG ++ ++G +
Sbjct: 153 TFE----YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKG-----RT 195
Query: 775 TVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPI 817
+ GTP YL PE L+ D ++LGV+ E+ G P
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 90/223 (40%), Gaps = 39/223 (17%)
Query: 609 NNFNSSTQIGQGGYGKVY------------KGILPDGTVVAVKRAQEGSLQGEKEFLTEI 656
+ F+ +G G +G+V IL VV +K+ + L E
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT--------LNEK 92
Query: 657 QFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLS--AKSKEPLGFAMRLSIAL 714
+ L ++ LV L + +V E+++ G + L + EP I L
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 715 GSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVS 774
YLH+ + +RD+K N+L+D + +V DFG ++ ++G +
Sbjct: 153 TFE----YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKG-----RT 195
Query: 775 TVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPI 817
+ GTP YL PE L+ D ++LGV+ E+ G P
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 90/223 (40%), Gaps = 39/223 (17%)
Query: 609 NNFNSSTQIGQGGYGKVY------------KGILPDGTVVAVKRAQEGSLQGEKEFLTEI 656
+ F+ +G G +G+V IL VV +K+ + L E
Sbjct: 36 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT--------LNEK 87
Query: 657 QFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLS--AKSKEPLGFAMRLSIAL 714
+ L ++ LV L + +V E+++ G + L + EP I L
Sbjct: 88 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVL 147
Query: 715 GSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVS 774
YLH+ + +RD+K N+L+D + +V DFG ++ ++G +
Sbjct: 148 TFE----YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKG-----RT 190
Query: 775 TVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPI 817
+ GTP YL PE L+ D ++LGV+ E+ G P
Sbjct: 191 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 233
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 90/223 (40%), Gaps = 39/223 (17%)
Query: 609 NNFNSSTQIGQGGYGKVY------------KGILPDGTVVAVKRAQEGSLQGEKEFLTEI 656
+ F+ +G G +G+V IL VV +K+ + L E
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT--------LNEK 92
Query: 657 QFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLS--AKSKEPLGFAMRLSIAL 714
+ L ++ LV L + +V E+++ G + L + EP I L
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVL 152
Query: 715 GSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVS 774
YLH+ + +RD+K N+L+D + +V DFG ++ ++G +
Sbjct: 153 TFE----YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKG-----RT 195
Query: 775 TVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPI 817
+ GTP YL PE L+ D ++LGV+ E+ G P
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 90/223 (40%), Gaps = 39/223 (17%)
Query: 609 NNFNSSTQIGQGGYGKVY------------KGILPDGTVVAVKRAQEGSLQGEKEFLTEI 656
+ F+ +G G +G+V IL VV +K+ + L E
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT--------LNEK 92
Query: 657 QFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLS--AKSKEPLGFAMRLSIAL 714
+ L ++ LV L + +V E+++ G + L + EP I L
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 715 GSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVS 774
YLH+ + +RD+K N+L+D + +V DFG ++ ++G +
Sbjct: 153 TFE----YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKG-----RT 195
Query: 775 TVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPI 817
+ GTP YL PE L+ D ++LGV+ E+ G P
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 90/223 (40%), Gaps = 39/223 (17%)
Query: 609 NNFNSSTQIGQGGYGKVY------------KGILPDGTVVAVKRAQEGSLQGEKEFLTEI 656
+ F+ +G G +G+V IL VV +K+ + L E
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT--------LNEK 92
Query: 657 QFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLS--AKSKEPLGFAMRLSIAL 714
+ L ++ LV L + +V E+++ G + L + EP I L
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 715 GSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVS 774
YLH+ + +RD+K N+L+D + +V DFG ++ ++G +
Sbjct: 153 TFE----YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKG-----RT 195
Query: 775 TVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPI 817
+ GTP YL PE L+ D ++LGV+ E+ G P
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 87/205 (42%), Gaps = 27/205 (13%)
Query: 617 IGQGGYGKV---YKGILPDGTVVA-VKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVG 672
IG G G V Y +L + + R + ++ + E+ + ++H+N++SL+
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKXVNHKNIISLLN 90
Query: 673 Y------CDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTE 726
+E + LV E M + E + + + + GI +LH+
Sbjct: 91 VFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLC-----GIKHLHSA 145
Query: 727 ADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDP 786
+ HRD+K SNI++ T K+ DFGL+R A + + T T Y P
Sbjct: 146 G---IIHRDLKPSNIVVKSDXTLKILDFGLARTAGT--------SFMMTPYVVTRYYRAP 194
Query: 787 EYFLTHKLTDKSDVYSLGVVFLELL 811
E L + D++S+G + E++
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 96/217 (44%), Gaps = 35/217 (16%)
Query: 611 FNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQE--GSLQGEKEFLTEIQFLSRLHHRNL 667
+ + + +G G YG V G VAVK+ S+ K E++ L + H N+
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 668 VSLVGY------CDEEGEQMLVYEFMS---NGTLRDQ-LSAKSKEPLGFAMRLSIALGSS 717
+ L+ +E + LV M N ++ Q L+ + L + +
Sbjct: 84 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL-------- 135
Query: 718 RGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVV 777
RG+ Y+H+ AD + HRD+K SN+ ++ K+ D GL+R ++ G V
Sbjct: 136 RGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDRGLARHTD-DEMTGYV-------- 183
Query: 778 KGTPGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLTG 813
T Y PE L +++ D++S+G + ELLTG
Sbjct: 184 -ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 91/210 (43%), Gaps = 33/210 (15%)
Query: 617 IGQGGYGKV---YKGILPDGTVVA-VKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVG 672
IG G G V Y IL + + R + ++ + E+ + ++H+N++ L+
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY-RELVLMKVVNHKNIIGLLN 90
Query: 673 Y------CDEEGEQMLVYEFMS---NGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYL 723
+E + +V E M + ++ +L + L + M + GI +L
Sbjct: 91 VFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLV--------GIKHL 142
Query: 724 HTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGY 783
H+ + HRD+K SNI++ T K+ DFGL+R A + + T T Y
Sbjct: 143 HSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAGT--------SFMMTPYVVTRYY 191
Query: 784 LDPEYFLTHKLTDKSDVYSLGVVFLELLTG 813
PE L + D++S+G + E++ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 10/100 (10%)
Query: 722 YLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSR-LAPVPDIEGIVPAHVSTVVKGT 780
YLH + + HRD+K NILL+ ++ DFG ++ L+P A + V GT
Sbjct: 144 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK-----QARANXFV-GT 194
Query: 781 PGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 820
Y+ PE SD+++LG + +L+ G+ P G
Sbjct: 195 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG 234
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 88/215 (40%), Gaps = 23/215 (10%)
Query: 609 NNFNSSTQIGQGGYGKVY-KGILPDGTVVAVK---RAQEGSLQGEKEFLTEIQFLSRLHH 664
+ F +G G +G+V + G A+K + + L+ + L E + L ++
Sbjct: 27 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 86
Query: 665 RNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLS--AKSKEPLGFAMRLSIALGSSRGILY 722
LV L + +V E++ G + L + EP I L Y
Sbjct: 87 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE----Y 142
Query: 723 LHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPG 782
LH+ + +RD+K N+L+D + +V DFG ++ V T+ GTP
Sbjct: 143 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKR---------VKGRTWTLC-GTPE 189
Query: 783 YLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPI 817
YL PE L+ D ++LGV+ E+ G P
Sbjct: 190 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 224
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 90/223 (40%), Gaps = 39/223 (17%)
Query: 609 NNFNSSTQIGQGGYGKVY------------KGILPDGTVVAVKRAQEGSLQGEKEFLTEI 656
+ F+ +G G +G+V IL VV +K+ + L E
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT--------LNEK 92
Query: 657 QFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLS--AKSKEPLGFAMRLSIAL 714
+ L ++ LV L + +V E+++ G + L + EP I L
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVL 152
Query: 715 GSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVS 774
YLH+ + +RD+K N+L+D + +V DFG ++ ++G +
Sbjct: 153 TFE----YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKG-----RT 195
Query: 775 TVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPI 817
+ GTP YL PE L+ D ++LGV+ E+ G P
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 90/223 (40%), Gaps = 39/223 (17%)
Query: 609 NNFNSSTQIGQGGYGKVY------------KGILPDGTVVAVKRAQEGSLQGEKEFLTEI 656
+ F+ +G G +G+V IL VV +K+ + L E
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT--------LNEK 113
Query: 657 QFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLS--AKSKEPLGFAMRLSIAL 714
+ L ++ LV L + +V E+++ G + L + EP I L
Sbjct: 114 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVL 173
Query: 715 GSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVS 774
YLH+ + +RD+K N+L+D + +V DFG ++ ++G +
Sbjct: 174 TFE----YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKG-----RT 216
Query: 775 TVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPI 817
+ GTP YL PE L+ D ++LGV+ E+ G P
Sbjct: 217 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 87/205 (42%), Gaps = 27/205 (13%)
Query: 617 IGQGGYGKV---YKGILPDGTVVA-VKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVG 672
IG G G V Y +L + + R + ++ + E+ + ++H+N++SL+
Sbjct: 31 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISLLN 89
Query: 673 Y------CDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTE 726
+E + LV E M + E + + + + GI +LH+
Sbjct: 90 VFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC-----GIKHLHSA 144
Query: 727 ADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDP 786
+ HRD+K SNI++ T K+ DFGL+R A + + T T Y P
Sbjct: 145 G---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--------SFMMTPYVVTRYYRAP 193
Query: 787 EYFLTHKLTDKSDVYSLGVVFLELL 811
E L + D++S+G + E++
Sbjct: 194 EVILGMGYKENVDIWSVGCIMGEMV 218
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 93/237 (39%), Gaps = 48/237 (20%)
Query: 606 LATNNFNSSTQIGQGGYGKVY---------------KGILPDGTVVAVKRAQEGSLQGEK 650
+ NF +G G YGKV+ +L T+V + E + + E+
Sbjct: 51 VGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHT-RTER 109
Query: 651 EFLTEIQ---FLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFA 707
+ L I+ FL LH+ E + L+ ++++ G L LS + +
Sbjct: 110 QVLEHIRQSPFLVTLHYA--------FQTETKLHLILDYINGGELFTHLSQRERFT---E 158
Query: 708 MRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE- 766
+ I +G +L L + +RDIK NILLD + DFGLS+ + E
Sbjct: 159 HEVQIYVGEI--VLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETER 216
Query: 767 -----GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPIS 818
G + +V+G D D +SLGV+ ELLTG P +
Sbjct: 217 AYDFCGTIEYMAPDIVRGGDSGHDK----------AVDWWSLGVLMYELLTGASPFT 263
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 87/205 (42%), Gaps = 27/205 (13%)
Query: 617 IGQGGYGKV---YKGILPDGTVVA-VKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVG 672
IG G G V Y +L + + R + ++ + E+ + ++H+N++SL+
Sbjct: 26 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISLLN 84
Query: 673 Y------CDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTE 726
+E + LV E M + E + + + + GI +LH+
Sbjct: 85 VFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC-----GIKHLHSA 139
Query: 727 ADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDP 786
+ HRD+K SNI++ T K+ DFGL+R A + + T T Y P
Sbjct: 140 G---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--------SFMMTPYVVTRYYRAP 188
Query: 787 EYFLTHKLTDKSDVYSLGVVFLELL 811
E L + D++S+G + E++
Sbjct: 189 EVILGMGYKENVDIWSVGCIMGEMV 213
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 87/205 (42%), Gaps = 27/205 (13%)
Query: 617 IGQGGYGKV---YKGILPDGTVVA-VKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVG 672
IG G G V Y +L + + R + ++ + E+ + ++H+N++SL+
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISLLN 90
Query: 673 Y------CDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTE 726
+E + LV E M + E + + + + GI +LH+
Sbjct: 91 VFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC-----GIKHLHSA 145
Query: 727 ADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDP 786
+ HRD+K SNI++ T K+ DFGL+R A + + T T Y P
Sbjct: 146 G---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--------SFMMTPYVVTRYYRAP 194
Query: 787 EYFLTHKLTDKSDVYSLGVVFLELL 811
E L + D++S+G + E++
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 87/205 (42%), Gaps = 27/205 (13%)
Query: 617 IGQGGYGKV---YKGILPDGTVVA-VKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVG 672
IG G G V Y +L + + R + ++ + E+ + ++H+N++SL+
Sbjct: 26 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISLLN 84
Query: 673 Y------CDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTE 726
+E + LV E M + E + + + + GI +LH+
Sbjct: 85 VFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC-----GIKHLHSA 139
Query: 727 ADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDP 786
+ HRD+K SNI++ T K+ DFGL+R A + + T T Y P
Sbjct: 140 G---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--------SFMMTPYVVTRYYRAP 188
Query: 787 EYFLTHKLTDKSDVYSLGVVFLELL 811
E L + D++S+G + E++
Sbjct: 189 EVILGMGYKENVDIWSVGCIMGEMV 213
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 87/205 (42%), Gaps = 27/205 (13%)
Query: 617 IGQGGYGKV---YKGILPDGTVVA-VKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVG 672
IG G G V Y +L + + R + ++ + E+ + ++H+N++SL+
Sbjct: 25 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISLLN 83
Query: 673 Y------CDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTE 726
+E + LV E M + E + + + + GI +LH+
Sbjct: 84 VFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC-----GIKHLHSA 138
Query: 727 ADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDP 786
+ HRD+K SNI++ T K+ DFGL+R A + + T T Y P
Sbjct: 139 G---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--------SFMMTPYVVTRYYRAP 187
Query: 787 EYFLTHKLTDKSDVYSLGVVFLELL 811
E L + D++S+G + E++
Sbjct: 188 EVILGMGYKENVDIWSVGCIMGEMV 212
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 89/205 (43%), Gaps = 23/205 (11%)
Query: 617 IGQGGYGKV---YKGILPDGTVVA-VKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVG 672
IG G G V Y IL + + R + ++ + E+ + ++H+N++ L+
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIIGLLN 90
Query: 673 YCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAM---RLSIALGSSR-GILYLHTEAD 728
Q + EF + + + A + + + R+S L GI +LH+
Sbjct: 91 VF---TPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLHSAG- 146
Query: 729 PPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEY 788
+ HRD+K SNI++ T K+ DFGL+R A + + T T Y PE
Sbjct: 147 --IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--------SFMMTPYVVTRYYRAPEV 196
Query: 789 FLTHKLTDKSDVYSLGVVFLELLTG 813
L + D++S+G + E++ G
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 89/203 (43%), Gaps = 23/203 (11%)
Query: 617 IGQGGYGKV---YKGILPDGTVVA-VKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVG 672
IG G G V Y +L + + R + ++ + E+ + ++H+N++SL+
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKXVNHKNIISLLN 90
Query: 673 YCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAM---RLSIALGSS-RGILYLHTEAD 728
Q + EF + + + A + + + R+S L GI +LH+
Sbjct: 91 VF---TPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSAG- 146
Query: 729 PPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEY 788
+ HRD+K SNI++ T K+ DFGL+R A + + T T Y PE
Sbjct: 147 --IIHRDLKPSNIVVKSDXTLKILDFGLARTAGT--------SFMMTPYVVTRYYRAPEV 196
Query: 789 FLTHKLTDKSDVYSLGVVFLELL 811
L + D++S+G + E++
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMV 219
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 87/205 (42%), Gaps = 27/205 (13%)
Query: 617 IGQGGYGKV---YKGILPDGTVVA-VKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVG 672
IG G G V Y +L + + R + ++ + E+ + ++H+N++SL+
Sbjct: 33 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISLLN 91
Query: 673 Y------CDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTE 726
+E + LV E M + E + + + + GI +LH+
Sbjct: 92 VFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC-----GIKHLHSA 146
Query: 727 ADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDP 786
+ HRD+K SNI++ T K+ DFGL+R A + + T T Y P
Sbjct: 147 G---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--------SFMMTPYVVTRYYRAP 195
Query: 787 EYFLTHKLTDKSDVYSLGVVFLELL 811
E L + D++S+G + E++
Sbjct: 196 EVILGMGYKENVDIWSVGCIMGEMV 220
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 87/205 (42%), Gaps = 27/205 (13%)
Query: 617 IGQGGYGKV---YKGILPDGTVVA-VKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVG 672
IG G G V Y +L + + R + ++ + E+ + ++H+N++SL+
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISLLN 90
Query: 673 Y------CDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTE 726
+E + LV E M + E + + + + GI +LH+
Sbjct: 91 VFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC-----GIKHLHSA 145
Query: 727 ADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDP 786
+ HRD+K SNI++ T K+ DFGL+R A + + T T Y P
Sbjct: 146 G---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--------SFMMTPYVVTRYYRAP 194
Query: 787 EYFLTHKLTDKSDVYSLGVVFLELL 811
E L + D++S+G + E++
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 88/215 (40%), Gaps = 23/215 (10%)
Query: 609 NNFNSSTQIGQGGYGKVY-KGILPDGTVVAVK---RAQEGSLQGEKEFLTEIQFLSRLHH 664
+ F +G G +G+V + G A+K + + L+ + L E + L ++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 665 RNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLS--AKSKEPLGFAMRLSIALGSSRGILY 722
LV L + +V E++ G + L + EP I L Y
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE----Y 157
Query: 723 LHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPG 782
LH+ + +RD+K N+L+D + +V DFG ++ V T+ GTP
Sbjct: 158 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKR---------VKGRTWTLC-GTPE 204
Query: 783 YLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPI 817
YL PE L+ D ++LGV+ E+ G P
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 96/217 (44%), Gaps = 35/217 (16%)
Query: 611 FNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQE--GSLQGEKEFLTEIQFLSRLHHRNL 667
+ + + +G G YG V G VAVK+ S+ K E++ L + H N+
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 668 VSLVGY------CDEEGEQMLVYEFMS---NGTLRDQ-LSAKSKEPLGFAMRLSIALGSS 717
+ L+ +E + LV M N ++ Q L+ + L + +
Sbjct: 84 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL-------- 135
Query: 718 RGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVV 777
RG+ Y+H+ AD + HRD+K SN+ ++ K+ D GL+R ++ G V
Sbjct: 136 RGLKYIHS-AD--IIHRDLKPSNLAVNEDCELKILDGGLARHTD-DEMTGYV-------- 183
Query: 778 KGTPGYLDPEYFLTHKLTDKS-DVYSLGVVFLELLTG 813
T Y PE L +++ D++S+G + ELLTG
Sbjct: 184 -ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 87/205 (42%), Gaps = 27/205 (13%)
Query: 617 IGQGGYGKV---YKGILPDGTVVA-VKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVG 672
IG G G V Y +L + + R + ++ + E+ + ++H+N++SL+
Sbjct: 70 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISLLN 128
Query: 673 Y------CDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTE 726
+E + LV E M + E + + + + GI +LH+
Sbjct: 129 VFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC-----GIKHLHSA 183
Query: 727 ADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDP 786
+ HRD+K SNI++ T K+ DFGL+R A + + T T Y P
Sbjct: 184 G---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--------SFMMTPYVVTRYYRAP 232
Query: 787 EYFLTHKLTDKSDVYSLGVVFLELL 811
E L + D++S+G + E++
Sbjct: 233 EVILGMGYKENVDIWSVGCIMGEMV 257
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 87/205 (42%), Gaps = 27/205 (13%)
Query: 617 IGQGGYGKV---YKGILPDGTVVA-VKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVG 672
IG G G V Y +L + + R + ++ + E+ + ++H+N++SL+
Sbjct: 33 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISLLN 91
Query: 673 Y------CDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTE 726
+E + LV E M + E + + + + GI +LH+
Sbjct: 92 VFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC-----GIKHLHSA 146
Query: 727 ADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDP 786
+ HRD+K SNI++ T K+ DFGL+R A + + T T Y P
Sbjct: 147 G---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--------SFMMTPYVVTRYYRAP 195
Query: 787 EYFLTHKLTDKSDVYSLGVVFLELL 811
E L + D++S+G + E++
Sbjct: 196 EVILGMGYKENVDIWSVGCIMGEMV 220
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 100/240 (41%), Gaps = 35/240 (14%)
Query: 608 TNNFNSSTQIGQGGYGKVYKGILPD---GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHH 664
++ + IG G +G ++ D +VAVK + G + ++ EI L H
Sbjct: 18 SDRYELVKDIGSGNFG--VARLMRDKQSNELVAVKYIERGE-KIDENVKREIINHRSLRH 74
Query: 665 RNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAK---SKEPLGFAMRLSIALGSSRGIL 721
N+V +V E+ S G L +++ S++ F + I+ G+
Sbjct: 75 PNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLIS-----GVS 129
Query: 722 YLHTEADPPVFHRDIKASNILLDHKFTA--KVADFGLSRLAPVPDIEGIVPAHVSTVVKG 779
Y H V HRD+K N LLD K+ FG S+ ++ + + V G
Sbjct: 130 YCHAMQ---VCHRDLKLENTLLDGSPAPRLKICAFGYSK-------SSVLHSQPKSTV-G 178
Query: 780 TPGYLDPEYFLTHKLTDK-SDVYSLGVVFLELLTGM-------QPISHGKNIVREVNIAY 831
TP Y+ PE L + K +DV+S GV +L G +P + K I R +N+ Y
Sbjct: 179 TPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQY 238
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 89/205 (43%), Gaps = 23/205 (11%)
Query: 617 IGQGGYGKV---YKGILPDGTVVA-VKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVG 672
IG G G V Y IL + + R + ++ + E+ + ++H+N++ L+
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY-RELVLMKVVNHKNIIGLLN 90
Query: 673 YCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAM---RLSIALGSSR-GILYLHTEAD 728
Q + EF + + + A + + + R+S L GI +LH+
Sbjct: 91 VF---TPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLHSAG- 146
Query: 729 PPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEY 788
+ HRD+K SNI++ T K+ DFGL+R A + + T T Y PE
Sbjct: 147 --IIHRDLKPSNIVVKSDATLKILDFGLARTAGT--------SFMMTPYVVTRYYRAPEV 196
Query: 789 FLTHKLTDKSDVYSLGVVFLELLTG 813
L + D++S+G + E++ G
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 89/223 (39%), Gaps = 39/223 (17%)
Query: 609 NNFNSSTQIGQGGYGKVY------------KGILPDGTVVAVKRAQEGSLQGEKEFLTEI 656
+ F +G G +G+V IL VV +K+ + L E
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT--------LNEK 92
Query: 657 QFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLS--AKSKEPLGFAMRLSIAL 714
+ L ++ LV L + +V E+++ G + L + EP I L
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 715 GSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVS 774
YLH+ + +RD+K N+L+D + +V DFG ++ ++G +
Sbjct: 153 TFE----YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKG-----RT 195
Query: 775 TVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPI 817
+ GTP YL PE L+ D ++LGV+ E+ G P
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 89/205 (43%), Gaps = 23/205 (11%)
Query: 617 IGQGGYGKV---YKGILPDGTVVA-VKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVG 672
IG G G V Y IL + + R + ++ + E+ + ++H+N++ L+
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIIGLLN 90
Query: 673 YCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAM---RLSIALGSSR-GILYLHTEAD 728
Q + EF + + + A + + + R+S L GI +LH+
Sbjct: 91 VF---TPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLHSAG- 146
Query: 729 PPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEY 788
+ HRD+K SNI++ T K+ DFGL+R A + + T T Y PE
Sbjct: 147 --IIHRDLKPSNIVVKSDATLKILDFGLARTAGT--------SFMMTPYVVTRYYRAPEV 196
Query: 789 FLTHKLTDKSDVYSLGVVFLELLTG 813
L + D++S+G + E++ G
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 89/215 (41%), Gaps = 23/215 (10%)
Query: 609 NNFNSSTQIGQGGYGKVY-KGILPDGTVVAVKRAQEGSLQGEKEF---LTEIQFLSRLHH 664
+ F +G G +G+V + G A+K + + KE L E + L ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 665 RNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLS--AKSKEPLGFAMRLSIALGSSRGILY 722
LV L + +V E+ G + L + EP I L Y
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE----Y 156
Query: 723 LHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPG 782
LH+ + +RD+K N+++D + +V DFGL++ ++G + + GTP
Sbjct: 157 LHS---LDLIYRDLKPENLMIDQQGYIQVTDFGLAK-----RVKG-----RTWXLCGTPE 203
Query: 783 YLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPI 817
YL PE L+ D ++LGV+ E+ G P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 100/236 (42%), Gaps = 48/236 (20%)
Query: 604 MALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSR-- 661
+ + +++ IG+G +G+V +V K +Q+ + L++ + + R
Sbjct: 70 LQMKAEDYDVVKVIGRGAFGEV--------QLVRHKASQKVYAM---KLLSKFEMIKRSD 118
Query: 662 ----LHHRNLVSLVG-------YCDEEGEQML--VYEFMSNGTLRDQLS---AKSKEPLG 705
R++++ +C + ++ L V E+M G L + +S K
Sbjct: 119 SAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKF 178
Query: 706 FAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 765
+ + +AL + +H+ + HRD+K N+LLD K+ADFG D
Sbjct: 179 YTAEVVLALDA------IHSMG---LIHRDVKPDNMLLDKHGHLKLADFGTCMKM---DE 226
Query: 766 EGIVPAHVSTVVKGTPGYLDPEYFLTHK----LTDKSDVYSLGVVFLELLTGMQPI 817
G+V H T V GTP Y+ PE + + D +S+GV E+L G P
Sbjct: 227 TGMV--HCDTAV-GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPF 279
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 89/203 (43%), Gaps = 23/203 (11%)
Query: 617 IGQGGYGKV---YKGILPDGTVVA-VKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVG 672
IG G G V Y +L + + R + ++ + E+ + ++H+N++SL+
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISLLN 90
Query: 673 YCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAM---RLSIALGSS-RGILYLHTEAD 728
Q + EF + + + A + + + R+S L GI +LH+
Sbjct: 91 VF---TPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSAG- 146
Query: 729 PPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEY 788
+ HRD+K SNI++ T K+ DFGL+R A + + T T Y PE
Sbjct: 147 --IIHRDLKPSNIVVKSDXTLKILDFGLARTAGT--------SFMMTPYVVTRYYRAPEV 196
Query: 789 FLTHKLTDKSDVYSLGVVFLELL 811
L + D++S+G + E++
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMV 219
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 87/205 (42%), Gaps = 27/205 (13%)
Query: 617 IGQGGYGKV---YKGILPDGTVVA-VKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVG 672
IG G G V Y +L + + R + ++ + E+ + ++H+N++SL+
Sbjct: 25 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISLLN 83
Query: 673 Y------CDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTE 726
+E + LV E M + E + + + + GI +LH+
Sbjct: 84 VFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLX-----GIKHLHSA 138
Query: 727 ADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDP 786
+ HRD+K SNI++ T K+ DFGL+R A + + T T Y P
Sbjct: 139 G---IIHRDLKPSNIVVKSDXTLKILDFGLARTAGT--------SFMMTPYVVTRYYRAP 187
Query: 787 EYFLTHKLTDKSDVYSLGVVFLELL 811
E L + D++S+G + E++
Sbjct: 188 EVILGMGYKENVDIWSVGCIMGEMV 212
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 88/223 (39%), Gaps = 39/223 (17%)
Query: 609 NNFNSSTQIGQGGYGKVY------------KGILPDGTVVAVKRAQEGSLQGEKEFLTEI 656
+ F +G G +G+V IL VV +K+ + L E
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHT--------LNEK 85
Query: 657 QFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLS--AKSKEPLGFAMRLSIAL 714
+ L ++ LV L + +V E++ G + L + EP I L
Sbjct: 86 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVL 145
Query: 715 GSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVS 774
YLH+ + +RD+K N+L+D + +V DFG ++ ++G +
Sbjct: 146 TFE----YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKG-----RT 188
Query: 775 TVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPI 817
+ GTP YL PE L+ D ++LGV+ E+ G P
Sbjct: 189 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 231
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 88/223 (39%), Gaps = 39/223 (17%)
Query: 609 NNFNSSTQIGQGGYGKVY------------KGILPDGTVVAVKRAQEGSLQGEKEFLTEI 656
+ F +G G +G+V IL VV +K+ + L E
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHT--------LNEK 85
Query: 657 QFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLS--AKSKEPLGFAMRLSIAL 714
+ L ++ LV L + +V E++ G + L + EP I L
Sbjct: 86 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL 145
Query: 715 GSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVS 774
YLH+ + +RD+K N+L+D + +V DFG ++ ++G +
Sbjct: 146 TFE----YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKG-----RT 188
Query: 775 TVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPI 817
+ GTP YL PE L+ D ++LGV+ E+ G P
Sbjct: 189 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 231
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 90/223 (40%), Gaps = 39/223 (17%)
Query: 609 NNFNSSTQIGQGGYGKVY------------KGILPDGTVVAVKRAQEGSLQGEKEFLTEI 656
+ F+ +G G +G+V IL VV +K+ + L E
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT--------LNEK 92
Query: 657 QFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLS--AKSKEPLGFAMRLSIAL 714
+ L ++ LV L + +V E+++ G + L + EP I L
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 715 GSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVS 774
YLH+ + +RD+K N+L+D + +V DFG ++ ++G +
Sbjct: 153 TFE----YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKG-----RT 195
Query: 775 TVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPI 817
+ GTP YL PE L+ D ++LGV+ ++ G P
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAGYPPF 238
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 90/215 (41%), Gaps = 23/215 (10%)
Query: 609 NNFNSSTQIGQGGYGKVY-KGILPDGTVVAVK---RAQEGSLQGEKEFLTEIQFLSRLHH 664
+ F +G G +G+V + G A+K + + L+ + L E + L ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 665 RNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLS--AKSKEPLGFAMRLSIALGSSRGILY 722
LV L + +V E++ G + L + EP I L Y
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFE----Y 156
Query: 723 LHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPG 782
LH+ + +RD+K N+L+D + +V DFG ++ ++G + + GTP
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKG-----RTWXLCGTPE 203
Query: 783 YLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPI 817
YL PE L+ D ++LGV+ E+ G P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 72/143 (50%), Gaps = 11/143 (7%)
Query: 608 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQE---GSLQGEKEFLTEIQFLSRL- 662
T F+ +IG G +G V+K + DG + A+KR+++ GS+ E+ L E+ + L
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVD-EQNALREVYAHAVLG 66
Query: 663 HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGF--AMRLSIALGSSRGI 720
H ++V E+ ++ E+ + G+L D +S + F A + L RG+
Sbjct: 67 QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGL 126
Query: 721 LYLHTEADPPVFHRDIKASNILL 743
Y+H+ + + H DIK SNI +
Sbjct: 127 RYIHSMS---LVHMDIKPSNIFI 146
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 90/215 (41%), Gaps = 23/215 (10%)
Query: 609 NNFNSSTQIGQGGYGKVY-KGILPDGTVVAVK---RAQEGSLQGEKEFLTEIQFLSRLHH 664
+ F +G G +G+V + G A+K + + L+ + L E + L ++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 665 RNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLS--AKSKEPLGFAMRLSIALGSSRGILY 722
LV L + +V E++ G + L + EP I L Y
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFE----Y 157
Query: 723 LHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPG 782
LH+ + +RD+K N+L+D + +V DFG ++ ++G + + GTP
Sbjct: 158 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKG-----RTWXLCGTPE 204
Query: 783 YLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPI 817
YL PE L+ D ++LGV+ E+ G P
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 90/215 (41%), Gaps = 23/215 (10%)
Query: 609 NNFNSSTQIGQGGYGKVY-KGILPDGTVVAVK---RAQEGSLQGEKEFLTEIQFLSRLHH 664
+ F +G G +G+V + G A+K + + L+ + L E + L ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 665 RNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLS--AKSKEPLGFAMRLSIALGSSRGILY 722
LV L + +V E++ G + L + EP I L Y
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFE----Y 156
Query: 723 LHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPG 782
LH+ + +RD+K N+L+D + +V DFG ++ ++G + + GTP
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKG-----RTWXLCGTPE 203
Query: 783 YLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPI 817
YL PE L+ D ++LGV+ E+ G P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 90/215 (41%), Gaps = 23/215 (10%)
Query: 609 NNFNSSTQIGQGGYGKVY-KGILPDGTVVAVK---RAQEGSLQGEKEFLTEIQFLSRLHH 664
+ F +G G +G+V + G A+K + + L+ + L E + L ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 665 RNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLS--AKSKEPLGFAMRLSIALGSSRGILY 722
LV L + +V E++ G + L + EP I L Y
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE----Y 156
Query: 723 LHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPG 782
LH+ + +RD+K N+L+D + +V DFG ++ ++G + + GTP
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKG-----RTWXLCGTPE 203
Query: 783 YLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPI 817
YL PE L+ D ++LGV+ E+ G P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 99/240 (41%), Gaps = 35/240 (14%)
Query: 608 TNNFNSSTQIGQGGYGKVYKGILPD---GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHH 664
++ + IG G +G ++ D +VAVK + G + ++ EI L H
Sbjct: 18 SDRYELVKDIGSGNFG--VARLMRDKQSNELVAVKYIERGE-KIDENVKREIINHRSLRH 74
Query: 665 RNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAK---SKEPLGFAMRLSIALGSSRGIL 721
N+V +V E+ S G L +++ S++ F + I+ G+
Sbjct: 75 PNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLIS-----GVS 129
Query: 722 YLHTEADPPVFHRDIKASNILLDHKFTA--KVADFGLSRLAPVPDIEGIVPAHVSTVVKG 779
Y H V HRD+K N LLD K+ FG S+ ++ + V G
Sbjct: 130 YCHAMQ---VCHRDLKLENTLLDGSPAPRLKICAFGYSK-------SSVLHSQPKDTV-G 178
Query: 780 TPGYLDPEYFLTHKLTDK-SDVYSLGVVFLELLTGM-------QPISHGKNIVREVNIAY 831
TP Y+ PE L + K +DV+S GV +L G +P + K I R +N+ Y
Sbjct: 179 TPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQY 238
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 72/143 (50%), Gaps = 11/143 (7%)
Query: 608 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQE---GSLQGEKEFLTEIQFLSRL- 662
T F+ +IG G +G V+K + DG + A+KR+++ GS+ E+ L E+ + L
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVD-EQNALREVYAHAVLG 66
Query: 663 HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGF--AMRLSIALGSSRGI 720
H ++V E+ ++ E+ + G+L D +S + F A + L RG+
Sbjct: 67 QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGL 126
Query: 721 LYLHTEADPPVFHRDIKASNILL 743
Y+H+ + + H DIK SNI +
Sbjct: 127 RYIHSMS---LVHMDIKPSNIFI 146
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 90/215 (41%), Gaps = 23/215 (10%)
Query: 609 NNFNSSTQIGQGGYGKVY-KGILPDGTVVAVK---RAQEGSLQGEKEFLTEIQFLSRLHH 664
+ F +G G +G+V + G A+K + + L+ + L E + L ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 665 RNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLS--AKSKEPLGFAMRLSIALGSSRGILY 722
LV L + +V E++ G + L + EP I L Y
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE----Y 156
Query: 723 LHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPG 782
LH+ + +RD+K N+L+D + +V DFG ++ ++G + + GTP
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKG-----RTWXLCGTPE 203
Query: 783 YLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPI 817
YL PE L+ D ++LGV+ E+ G P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 89/215 (41%), Gaps = 23/215 (10%)
Query: 609 NNFNSSTQIGQGGYGKVY-KGILPDGTVVAVK---RAQEGSLQGEKEFLTEIQFLSRLHH 664
+ F +G G +G+V + G A+K + + L+ + L E + L ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 665 RNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLS--AKSKEPLGFAMRLSIALGSSRGILY 722
LV L + +V E+ G + L + EP I L Y
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFE----Y 156
Query: 723 LHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPG 782
LH+ + +RD+K N+++D + KV DFG ++ ++G + + GTP
Sbjct: 157 LHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKG-----RTWXLCGTPE 203
Query: 783 YLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPI 817
YL PE L+ D ++LGV+ E+ G P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 90/215 (41%), Gaps = 23/215 (10%)
Query: 609 NNFNSSTQIGQGGYGKVY-KGILPDGTVVAVK---RAQEGSLQGEKEFLTEIQFLSRLHH 664
+ F +G G +G+V + G A+K + + L+ + L E + L ++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 665 RNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLS--AKSKEPLGFAMRLSIALGSSRGILY 722
LV L + +V E++ G + L + EP I L Y
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE----Y 157
Query: 723 LHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPG 782
LH+ + +RD+K N+L+D + +V DFG ++ ++G + + GTP
Sbjct: 158 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKG-----RTWXLCGTPE 204
Query: 783 YLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPI 817
YL PE L+ D ++LGV+ E+ G P
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 88/223 (39%), Gaps = 39/223 (17%)
Query: 609 NNFNSSTQIGQGGYGKVY------------KGILPDGTVVAVKRAQEGSLQGEKEFLTEI 656
+ F +G G +G+V IL VV +K+ + L E
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHT--------LNEK 92
Query: 657 QFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLS--AKSKEPLGFAMRLSIAL 714
+ L ++ LV L + +V E++ G + L + EP I L
Sbjct: 93 RILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 715 GSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVS 774
YLH+ + +RD+K N+L+D + +V DFG ++ ++G +
Sbjct: 153 TFE----YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKG-----RT 195
Query: 775 TVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPI 817
+ GTP YL PE L+ D ++LGV+ E+ G P
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 72/143 (50%), Gaps = 11/143 (7%)
Query: 608 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQE---GSLQGEKEFLTEIQFLSRL- 662
T F+ +IG G +G V+K + DG + A+KR+++ GS+ E+ L E+ + L
Sbjct: 6 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVD-EQNALREVYAHAVLG 64
Query: 663 HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGF--AMRLSIALGSSRGI 720
H ++V E+ ++ E+ + G+L D +S + F A + L RG+
Sbjct: 65 QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGL 124
Query: 721 LYLHTEADPPVFHRDIKASNILL 743
Y+H+ + + H DIK SNI +
Sbjct: 125 RYIHSMS---LVHMDIKPSNIFI 144
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 90/215 (41%), Gaps = 23/215 (10%)
Query: 609 NNFNSSTQIGQGGYGKVY-KGILPDGTVVAVK---RAQEGSLQGEKEFLTEIQFLSRLHH 664
+ F +G G +G+V + G A+K + + L+ + L E + L ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 665 RNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLS--AKSKEPLGFAMRLSIALGSSRGILY 722
LV L + +V E++ G + L + EP I L Y
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE----Y 156
Query: 723 LHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPG 782
LH+ + +RD+K N+L+D + +V DFG ++ ++G + + GTP
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKG-----RTWXLCGTPE 203
Query: 783 YLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPI 817
YL PE L+ D ++LGV+ E+ G P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 89/215 (41%), Gaps = 23/215 (10%)
Query: 609 NNFNSSTQIGQGGYGKVY-KGILPDGTVVAVK---RAQEGSLQGEKEFLTEIQFLSRLHH 664
+ F +G G +G+V + G A+K + + L+ + L E + L ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 665 RNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLS--AKSKEPLGFAMRLSIALGSSRGILY 722
LV L + +V E+ G + L + EP I L Y
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE----Y 156
Query: 723 LHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPG 782
LH+ + +RD+K N+++D + KV DFG ++ ++G + + GTP
Sbjct: 157 LHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKG-----RTWXLCGTPE 203
Query: 783 YLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPI 817
YL PE L+ D ++LGV+ E+ G P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 88/223 (39%), Gaps = 39/223 (17%)
Query: 609 NNFNSSTQIGQGGYGKVY------------KGILPDGTVVAVKRAQEGSLQGEKEFLTEI 656
+ F +G G +G+V IL VV +K+ + L E
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHT--------LNEK 93
Query: 657 QFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLS--AKSKEPLGFAMRLSIAL 714
+ L ++ LV L + +V E++ G + L + EP I L
Sbjct: 94 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL 153
Query: 715 GSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVS 774
YLH+ + +RD+K N+L+D + +V DFG ++ ++G +
Sbjct: 154 TFE----YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKG-----RT 196
Query: 775 TVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPI 817
+ GTP YL PE L+ D ++LGV+ E+ G P
Sbjct: 197 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 72/143 (50%), Gaps = 11/143 (7%)
Query: 608 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQE---GSLQGEKEFLTEIQFLSRL- 662
T F+ +IG G +G V+K + DG + A+KR+++ GS+ E+ L E+ + L
Sbjct: 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVD-EQNALREVYAHAVLG 68
Query: 663 HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGF--AMRLSIALGSSRGI 720
H ++V E+ ++ E+ + G+L D +S + F A + L RG+
Sbjct: 69 QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGL 128
Query: 721 LYLHTEADPPVFHRDIKASNILL 743
Y+H+ + + H DIK SNI +
Sbjct: 129 RYIHSMS---LVHMDIKPSNIFI 148
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 88/223 (39%), Gaps = 39/223 (17%)
Query: 609 NNFNSSTQIGQGGYGKVY------------KGILPDGTVVAVKRAQEGSLQGEKEFLTEI 656
+ F +G G +G+V IL VV +K+ + L E
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHT--------LNEK 92
Query: 657 QFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLS--AKSKEPLGFAMRLSIAL 714
+ L ++ LV L + +V E++ G + L + EP I L
Sbjct: 93 RILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 715 GSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVS 774
YLH+ + +RD+K N+L+D + +V DFG ++ ++G +
Sbjct: 153 TFE----YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKG-----RT 195
Query: 775 TVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPI 817
+ GTP YL PE L+ D ++LGV+ E+ G P
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 90/223 (40%), Gaps = 39/223 (17%)
Query: 609 NNFNSSTQIGQGGYGKVY------------KGILPDGTVVAVKRAQEGSLQGEKEFLTEI 656
+ F+ +G G +G+V IL VV +K+ + L E
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT--------LNEK 92
Query: 657 QFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLS--AKSKEPLGFAMRLSIAL 714
+ L ++ LV L + +V E+++ G + L + EP I L
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 715 GSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVS 774
YLH+ + +RD+K N+++D + +V DFG ++ ++G +
Sbjct: 153 TFE----YLHS---LDLIYRDLKPENLIIDQQGYIQVTDFGFAK-----RVKG-----RT 195
Query: 775 TVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPI 817
+ GTP YL PE ++ D ++LGV+ E+ G P
Sbjct: 196 WXLCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 88/223 (39%), Gaps = 39/223 (17%)
Query: 609 NNFNSSTQIGQGGYGKVY------------KGILPDGTVVAVKRAQEGSLQGEKEFLTEI 656
+ F +G G +G+V IL VV +K+ + L E
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHT--------LNEK 93
Query: 657 QFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLS--AKSKEPLGFAMRLSIAL 714
+ L ++ LV L + +V E++ G + L + EP I L
Sbjct: 94 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL 153
Query: 715 GSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVS 774
YLH+ + +RD+K N+L+D + +V DFG ++ ++G +
Sbjct: 154 TFE----YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKG-----RT 196
Query: 775 TVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPI 817
+ GTP YL PE L+ D ++LGV+ E+ G P
Sbjct: 197 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 88/223 (39%), Gaps = 39/223 (17%)
Query: 609 NNFNSSTQIGQGGYGKVY------------KGILPDGTVVAVKRAQEGSLQGEKEFLTEI 656
+ F +G G +G+V IL VV +K+ + L E
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHT--------LNEK 93
Query: 657 QFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLS--AKSKEPLGFAMRLSIAL 714
+ L ++ LV L + +V E++ G + L + EP I L
Sbjct: 94 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL 153
Query: 715 GSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVS 774
YLH+ + +RD+K N+L+D + +V DFG ++ ++G +
Sbjct: 154 TFE----YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKG-----RT 196
Query: 775 TVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPI 817
+ GTP YL PE L+ D ++LGV+ E+ G P
Sbjct: 197 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 88/223 (39%), Gaps = 39/223 (17%)
Query: 609 NNFNSSTQIGQGGYGKVY------------KGILPDGTVVAVKRAQEGSLQGEKEFLTEI 656
+ F +G G +G+V IL VV +K+ + L E
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHT--------LNEK 92
Query: 657 QFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLS--AKSKEPLGFAMRLSIAL 714
+ L ++ LV L + +V E++ G + L + EP I L
Sbjct: 93 RILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 715 GSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVS 774
YLH+ + +RD+K N+L+D + +V DFG ++ ++G +
Sbjct: 153 TFE----YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKG-----RT 195
Query: 775 TVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPI 817
+ GTP YL PE L+ D ++LGV+ E+ G P
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 87/223 (39%), Gaps = 39/223 (17%)
Query: 609 NNFNSSTQIGQGGYGKVY------------KGILPDGTVVAVKRAQEGSLQGEKEFLTEI 656
+ F +G G +G+V IL VV +K+ + L E
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHT--------LNEK 93
Query: 657 QFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLS--AKSKEPLGFAMRLSIAL 714
+ L ++ LV L + +V E+ G + L + EP I L
Sbjct: 94 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVL 153
Query: 715 GSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVS 774
YLH+ + +RD+K N+++D + KV DFG ++ ++G +
Sbjct: 154 TFE----YLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKG-----RT 196
Query: 775 TVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPI 817
+ GTP YL PE L+ D ++LGV+ E+ G P
Sbjct: 197 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 88/223 (39%), Gaps = 39/223 (17%)
Query: 609 NNFNSSTQIGQGGYGKVY------------KGILPDGTVVAVKRAQEGSLQGEKEFLTEI 656
+ F +G G +G+V IL VV +K+ + L E
Sbjct: 62 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHT--------LNEK 113
Query: 657 QFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLS--AKSKEPLGFAMRLSIAL 714
+ L ++ LV L + +V E++ G + L + EP I L
Sbjct: 114 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL 173
Query: 715 GSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVS 774
YLH+ + +RD+K N+L+D + +V DFG ++ ++G +
Sbjct: 174 TFE----YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKG-----RT 216
Query: 775 TVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPI 817
+ GTP YL PE L+ D ++LGV+ E+ G P
Sbjct: 217 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 13/96 (13%)
Query: 722 YLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTP 781
YLH+ + +RD+K N+++D + KV DFG ++ ++G + + GTP
Sbjct: 157 YLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKG-----RTWXLCGTP 203
Query: 782 GYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPI 817
YL PE L+ D ++LGV+ E+ G P
Sbjct: 204 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 13/96 (13%)
Query: 722 YLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTP 781
YLH+ + +RD+K N+++D + KV DFG ++ ++G + + GTP
Sbjct: 157 YLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKG-----RTWXLCGTP 203
Query: 782 GYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPI 817
YL PE L+ D ++LGV+ E+ G P
Sbjct: 204 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 13/96 (13%)
Query: 722 YLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTP 781
YLH+ + +RD+K N+++D + KV DFG ++ ++G + + GTP
Sbjct: 157 YLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKG-----RTWXLCGTP 203
Query: 782 GYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPI 817
YL PE L+ D ++LGV+ E+ G P
Sbjct: 204 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 89/223 (39%), Gaps = 39/223 (17%)
Query: 609 NNFNSSTQIGQGGYGKVY------------KGILPDGTVVAVKRAQEGSLQGEKEFLTEI 656
+ F+ +G G +G+V IL VV +K+ + L E
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT--------LNEK 92
Query: 657 QFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLS--AKSKEPLGFAMRLSIAL 714
+ L ++ LV L + +V E+++ G + L + EP I L
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 715 GSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVS 774
YLH+ + +RD+K N+L+D + +V DFG ++ ++G +
Sbjct: 153 TFE----YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKG-----RT 195
Query: 775 TVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPI 817
+ GTP YL P L+ D ++LGV+ E+ G P
Sbjct: 196 WXLCGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 86/205 (41%), Gaps = 27/205 (13%)
Query: 617 IGQGGYGKV---YKGILPDGTVVA-VKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVG 672
IG G G V Y IL + + R + ++ + E+ + ++H+N++ L+
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIIGLLN 90
Query: 673 Y------CDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTE 726
+E + +V E M + E + + + + GI +LH+
Sbjct: 91 VFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLC-----GIKHLHSA 145
Query: 727 ADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDP 786
+ HRD+K SNI++ T K+ DFGL+R A G VV T Y P
Sbjct: 146 G---IIHRDLKPSNIVVKSDCTLKILDFGLARTA------GTSFMMEPEVV--TRYYRAP 194
Query: 787 EYFLTHKLTDKSDVYSLGVVFLELL 811
E L + D++S+G + E++
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 86/205 (41%), Gaps = 27/205 (13%)
Query: 617 IGQGGYGKV---YKGILPDGTVVA-VKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVG 672
IG G G V Y IL + + R + ++ + E+ + ++H+N++ L+
Sbjct: 37 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIIGLLN 95
Query: 673 Y------CDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTE 726
+E + +V E M + E + + + + GI +LH+
Sbjct: 96 VFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLC-----GIKHLHSA 150
Query: 727 ADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDP 786
+ HRD+K SNI++ T K+ DFGL+R A + + T T Y P
Sbjct: 151 G---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--------SFMMTPYVVTRYYRAP 199
Query: 787 EYFLTHKLTDKSDVYSLGVVFLELL 811
E L + D++S+G + E++
Sbjct: 200 EVILGMGYKENVDLWSVGCIMGEMV 224
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 95/219 (43%), Gaps = 24/219 (10%)
Query: 603 EMALATNNFNSSTQIGQGGYGKVYKGILPD---GTVVAVKRAQEGSLQGEKEFLTEIQFL 659
E+ AT+ ++G+G +G+V++ + D G AVK+ + + E E+
Sbjct: 91 EVHWATHQL----RLGRGSFGEVHR--MEDKQTGFQCAVKKVRLEVFRAE-----ELMAC 139
Query: 660 SRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMR-LSIALGSSR 718
+ L +V L G E + E + G+L + + P A+ L AL
Sbjct: 140 AGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQAL---E 196
Query: 719 GILYLHTEADPPVFHRDIKASNILLDHKFT-AKVADFGLSRLAPVPDIEGIVPAHVSTVV 777
G+ YLH+ + H D+KA N+LL + A + DFG + + PD G +
Sbjct: 197 GLEYLHSRR---ILHGDVKADNVLLSSDGSHAALCDFGHA-VCLQPDGLGKS-LLTGDYI 251
Query: 778 KGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQP 816
GT ++ PE L K DV+S + L +L G P
Sbjct: 252 PGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHP 290
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 89/215 (41%), Gaps = 23/215 (10%)
Query: 609 NNFNSSTQIGQGGYGKVY-KGILPDGTVVAVK---RAQEGSLQGEKEFLTEIQFLSRLHH 664
+ F +G G +G+V + G A+K + + L+ + L E + L ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 665 RNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLS--AKSKEPLGFAMRLSIALGSSRGILY 722
LV L + +V E+ G + L + EP I L Y
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE----Y 156
Query: 723 LHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPG 782
LH+ + +RD+K N+++D + +V DFG ++ ++G + + GTP
Sbjct: 157 LHS---LDLIYRDLKPENLMIDQQGYIQVTDFGFAK-----RVKG-----RTWXLCGTPE 203
Query: 783 YLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPI 817
YL PE L+ D ++LGV+ E+ G P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 69/143 (48%), Gaps = 18/143 (12%)
Query: 682 LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNI 741
LV+E+++N + + + F M + + + Y H++ + HRD+K N+
Sbjct: 112 LVFEYINNTDFKQLYQILTDFDIRFYMYELL-----KALDYCHSKG---IMHRDVKPHNV 163
Query: 742 LLDHKFTA-KVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKS-D 799
++DH+ ++ D+GL+ E PA V + + PE + +++ D S D
Sbjct: 164 MIDHQQKKLRLIDWGLA--------EFYHPAQEYNVRVASRYFKGPELLVDYQMYDYSLD 215
Query: 800 VYSLGVVFLELLTGMQPISHGKN 822
++SLG + ++ +P HG++
Sbjct: 216 MWSLGCMLASMIFRREPFFHGQD 238
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 69/143 (48%), Gaps = 18/143 (12%)
Query: 682 LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNI 741
LV+E+++N + + + F M + + + Y H++ + HRD+K N+
Sbjct: 117 LVFEYINNTDFKQLYQILTDFDIRFYMYELL-----KALDYCHSKG---IMHRDVKPHNV 168
Query: 742 LLDHKFTA-KVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKS-D 799
++DH+ ++ D+GL+ E PA V + + PE + +++ D S D
Sbjct: 169 MIDHQQKKLRLIDWGLA--------EFYHPAQEYNVRVASRYFKGPELLVDYQMYDYSLD 220
Query: 800 VYSLGVVFLELLTGMQPISHGKN 822
++SLG + ++ +P HG++
Sbjct: 221 MWSLGCMLASMIFRREPFFHGQD 243
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 71/170 (41%), Gaps = 19/170 (11%)
Query: 655 EIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIAL 714
E L H ++V L+ +G +V+EFM L ++ ++ GF ++A
Sbjct: 78 EASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADA--GFVYSEAVAS 135
Query: 715 GSSRGIL----YLHTEADPPVFHRDIKASNILLDHKFTA---KVADFGLSRLAPVPDIEG 767
R IL Y H D + HRD+K +LL K + K+ FG++ I+
Sbjct: 136 HYMRQILEALRYCH---DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVA-------IQL 185
Query: 768 IVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPI 817
V+ GTP ++ PE DV+ GV+ LL+G P
Sbjct: 186 GESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPF 235
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.135 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,051,913
Number of Sequences: 62578
Number of extensions: 1034133
Number of successful extensions: 5560
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 911
Number of HSP's successfully gapped in prelim test: 257
Number of HSP's that attempted gapping in prelim test: 2384
Number of HSP's gapped (non-prelim): 1363
length of query: 941
length of database: 14,973,337
effective HSP length: 108
effective length of query: 833
effective length of database: 8,214,913
effective search space: 6843022529
effective search space used: 6843022529
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)